## Tue Feb 17 09:55:30 2026 ## emapper-2.1.13 ## /data/anaconda3/envs/eggnog-mapper/bin/emapper.py -i /data/result/bins/wyx/bins/HKD3_bin.76.fa -m mmseqs --output HKD3_bin.76 --output_dir /data/result/bins/wyx/eggqs50+/HKD3_bin.76 --itype genome --cpu 8 --override ## #query seed_ortholog evalue score eggNOG_OGs max_annot_lvl COG_category Description Preferred_name GOs EC KEGG_ko KEGG_Pathway KEGG_Module KEGG_Reaction KEGG_rclass BRITE KEGG_TC CAZy BiGG_Reaction PFAMs HKD3_k127_106294_2 1297742.A176_02905 3.083e-69 256.0 29YN3@1|root,30KHK@2|Bacteria 2|Bacteria S Putative ABC exporter - - - - - - - - - - - - ABC_export HKD3_k127_106294_1 379066.GAU_0292 5.678e-80 287.0 COG1131@1|root,COG1131@2|Bacteria,1ZT45@142182|Gemmatimonadetes 142182|Gemmatimonadetes V ABC transporter - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_106294_0 1192034.CAP_3564 1.452e-220 689.0 COG2006@1|root,COG2006@2|Bacteria,1NSD4@1224|Proteobacteria,42YV4@68525|delta/epsilon subdivisions,2WTK6@28221|Deltaproteobacteria,2YWVS@29|Myxococcales 28221|Deltaproteobacteria S Domain of unknown function (DUF362) - - - - - - - - - - - - DUF362 HKD3_k127_106294_3 1121920.AUAU01000007_gene506 1.214e-47 172.0 COG0477@1|root,COG2814@2|Bacteria,3Y6YQ@57723|Acidobacteria 57723|Acidobacteria EGP Major Facilitator Superfamily - - - - - - - - - - - - MFS_1 HKD3_k127_1077050_2 1225184.ALXE01000023_gene1915 1.506e-41 171.0 COG0477@1|root,COG2814@2|Bacteria,1MUBP@1224|Proteobacteria,1RNXS@1236|Gammaproteobacteria,3VY1C@53335|Pantoea 1236|Gammaproteobacteria EGP Major facilitator superfamily - - - - - - - - - - - - MFS_1,MFS_1_like,Sugar_tr HKD3_k127_1077050_0 234267.Acid_7175 5.638e-125 410.0 COG1494@1|root,COG1494@2|Bacteria,3Y2XJ@57723|Acidobacteria 57723|Acidobacteria G Bacterial fructose-1,6-bisphosphatase, glpX-encoded - - 3.1.3.11 ko:K02446 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200 M00003,M00165,M00167 R00762,R04780 RC00017 ko00000,ko00001,ko00002,ko01000 - - - FBPase_glpX HKD3_k127_1077050_1 1120972.AUMH01000002_gene2725 1.085e-51 186.0 COG1960@1|root,COG1960@2|Bacteria,1TPVK@1239|Firmicutes,4HA7B@91061|Bacilli 91061|Bacilli I Dehydrogenase B4168_2380 - 1.3.99.32 ko:K16173 ko00362,ko01120,map00362,map01120 - R05579 RC00052 ko00000,ko00001,ko01000 - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N HKD3_k127_1201153_3 1267535.KB906767_gene430 1.357e-12 68.0 COG3682@1|root,COG3682@2|Bacteria,3Y8B7@57723|Acidobacteria 57723|Acidobacteria K Penicillinase repressor - - - - - - - - - - - - Penicillinase_R HKD3_k127_1201153_1 234267.Acid_1032 1.671e-55 220.0 COG0810@1|root,COG4219@1|root,COG0810@2|Bacteria,COG4219@2|Bacteria 2|Bacteria M energy transducer activity - - - ko:K03832 - - - - ko00000,ko02000 2.C.1.1 - - CarbopepD_reg_2,Peptidase_M56,TonB_C HKD3_k127_1201153_2 234267.Acid_1280 7.472e-22 112.0 COG0810@1|root,COG0810@2|Bacteria,3Y31T@57723|Acidobacteria 57723|Acidobacteria M TIGRFAM TonB family - - - ko:K03832 - - - - ko00000,ko02000 2.C.1.1 - - TonB_C HKD3_k127_1201153_0 1123368.AUIS01000029_gene1292 1.565e-124 411.0 COG3696@1|root,COG3696@2|Bacteria,1NUIV@1224|Proteobacteria,1SP6I@1236|Gammaproteobacteria 1236|Gammaproteobacteria P Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - ko:K15726 - - - - ko00000,ko02000 2.A.6.1.2 - - ACR_tran HKD3_k127_1217653_0 204669.Acid345_2392 6.484e-140 450.0 COG1260@1|root,COG1260@2|Bacteria,3Y325@57723|Acidobacteria,2JIPN@204432|Acidobacteriia 204432|Acidobacteriia I Myo-inositol-1-phosphate synthase - - 5.5.1.4 ko:K01858 ko00521,ko00562,ko01100,ko01130,map00521,map00562,map01100,map01130 - R07324 RC01804 ko00000,ko00001,ko01000 - - - Inos-1-P_synth,NAD_binding_5 HKD3_k127_1217653_6 883126.HMPREF9710_05180 0.0002984 50.0 COG0500@1|root,COG2226@2|Bacteria,1MXP4@1224|Proteobacteria,2VJM3@28216|Betaproteobacteria,474EJ@75682|Oxalobacteraceae 28216|Betaproteobacteria Q ubiE/COQ5 methyltransferase family ubiE_1 - - - - - - - - - - - Methyltransf_11,Methyltransf_25 HKD3_k127_1217653_3 1267535.KB906767_gene624 9.672e-35 149.0 COG2304@1|root,COG2304@2|Bacteria,3Y483@57723|Acidobacteria,2JI1N@204432|Acidobacteriia 204432|Acidobacteriia S von Willebrand factor, type A - - - - - - - - - - - - VWA,VWA_2 HKD3_k127_1217653_2 2340.JV46_27810 1.638e-64 228.0 COG0428@1|root,COG0428@2|Bacteria,1R40E@1224|Proteobacteria,1RRYS@1236|Gammaproteobacteria,1J6RV@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria P ZIP Zinc transporter - - - ko:K16267 - - - - ko00000,ko02000 2.A.5.4.11 - - Zip HKD3_k127_1217653_4 234267.Acid_3785 1.627e-24 117.0 COG2823@1|root,COG2823@2|Bacteria,3Y4KR@57723|Acidobacteria 57723|Acidobacteria S BON domain - - - - - - - - - - - - BON HKD3_k127_1217653_5 1056512.D515_01609 8.228e-05 53.0 COG3678@1|root,COG3678@2|Bacteria,1RBDH@1224|Proteobacteria,1S2DT@1236|Gammaproteobacteria,1XWIC@135623|Vibrionales 135623|Vibrionales NPTU COG3678 P pilus assembly Cpx signaling pathway, periplasmic inhibitor zinc-resistance associated protein cpxP - - ko:K06006 - - - - ko00000,ko03110 - - - LTXXQ HKD3_k127_1217653_1 1177928.TH2_01770 5.599e-121 407.0 COG0258@1|root,COG0749@1|root,COG0258@2|Bacteria,COG0749@2|Bacteria,1MU31@1224|Proteobacteria,2TRJF@28211|Alphaproteobacteria,2JQ4K@204441|Rhodospirillales 204441|Rhodospirillales L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity polA - 2.7.7.7 ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 - R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko01000,ko03032,ko03400 - - - 5_3_exonuc,5_3_exonuc_N,DNA_pol_A,DNA_pol_A_exo1 HKD3_k127_1218347_24 94624.Bpet4633 1.387e-07 57.0 COG2801@1|root,COG2801@2|Bacteria,1MVN5@1224|Proteobacteria,2VKH2@28216|Betaproteobacteria,3T30Q@506|Alcaligenaceae 28216|Betaproteobacteria L Transposase and inactivated derivatives - - - ko:K07497 - - - - ko00000 - - - HTH_21,HTH_Tnp_1,rve,rve_3 HKD3_k127_1218347_25 111781.Lepto7376_0805 2.23e-06 53.0 COG3012@1|root,COG3012@2|Bacteria,1GDSX@1117|Cyanobacteria,1HFUE@1150|Oscillatoriales 1117|Cyanobacteria S SEC-C Motif Domain Protein - - - - - - - - - - - - - HKD3_k127_1218347_21 237368.SCABRO_00545 1.307e-16 84.0 COG4634@1|root,COG4634@2|Bacteria,2J4DQ@203682|Planctomycetes 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_1218347_19 1283300.ATXB01000001_gene277 2.65e-20 93.0 COG2442@1|root,COG2442@2|Bacteria,1N7GJ@1224|Proteobacteria,1SCUP@1236|Gammaproteobacteria,1XFVQ@135618|Methylococcales 135618|Methylococcales S Protein of unknown function (DUF433) - - - - - - - - - - - - DUF433 HKD3_k127_1218347_4 1396141.BATP01000001_gene5350 3.349e-169 542.0 COG0673@1|root,COG0673@2|Bacteria,46S77@74201|Verrucomicrobia,2IU49@203494|Verrucomicrobiae 203494|Verrucomicrobiae S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA HKD3_k127_1218347_0 926550.CLDAP_19940 0.0 1039.0 COG3250@1|root,COG3250@2|Bacteria 2|Bacteria G beta-galactosidase activity - - - - - - - - - - - - Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N HKD3_k127_1218347_20 404589.Anae109_2978 6.792e-18 91.0 2DSZ0@1|root,33HZS@2|Bacteria,1NHUW@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - HKD3_k127_1218347_5 247633.GP2143_17871 8.777e-169 546.0 COG0793@1|root,COG0793@2|Bacteria,1MUA3@1224|Proteobacteria,1RR5H@1236|Gammaproteobacteria 1236|Gammaproteobacteria M COG0793 Periplasmic protease - - - - - - - - - - - - Peptidase_S41 HKD3_k127_1218347_6 1120971.AUCA01000065_gene1882 3.828e-145 504.0 COG1074@1|root,COG1074@2|Bacteria,1TQ35@1239|Firmicutes,4HA64@91061|Bacilli,277XR@186823|Alicyclobacillaceae 91061|Bacilli L ATP-dependent helicase nuclease subunit A - - 3.6.4.12 ko:K16898 - - - - ko00000,ko01000,ko03400 - - - PDDEXK_1,UvrD-helicase,UvrD_C HKD3_k127_1218347_12 706587.Desti_2677 6.213e-74 282.0 COG3857@1|root,COG3857@2|Bacteria 2|Bacteria L exonuclease activity - - 3.6.4.12 ko:K16899 - - - - ko00000,ko01000,ko03400 - - - PDDEXK_1 HKD3_k127_1218347_1 1089547.KB913013_gene113 3.291e-246 791.0 COG3391@1|root,COG3511@1|root,COG3391@2|Bacteria,COG3511@2|Bacteria,4NEFM@976|Bacteroidetes,47KHM@768503|Cytophagia 976|Bacteroidetes M amine dehydrogenase activity - - - - - - - - - - - - Phosphoesterase HKD3_k127_1218347_23 751944.HALDL1_14765 5.679e-09 68.0 COG0642@1|root,arCOG02358@2157|Archaea,arCOG06192@2157|Archaea,2Y7KE@28890|Euryarchaeota,2411I@183963|Halobacteria 183963|Halobacteria T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HisKA HKD3_k127_1218347_22 383372.Rcas_0309 1.054e-15 81.0 2EJQK@1|root,33DFE@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_1218347_2 1123008.KB905706_gene882 2.365e-232 745.0 COG3408@1|root,COG3408@2|Bacteria,4PE41@976|Bacteroidetes,2FW65@200643|Bacteroidia 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - - - - - - - - - - Bac_rhamnosid6H HKD3_k127_1218347_10 1177179.A11A3_02282 1.748e-91 312.0 COG0604@1|root,COG0604@2|Bacteria,1QY04@1224|Proteobacteria,1RSP0@1236|Gammaproteobacteria,1XR3H@135619|Oceanospirillales 135619|Oceanospirillales C COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - - - - - - - - - - ADH_N,ADH_zinc_N,ADH_zinc_N_2 HKD3_k127_1218347_3 234267.Acid_3246 3.546e-177 572.0 COG0673@1|root,COG0673@2|Bacteria,3Y76D@57723|Acidobacteria 57723|Acidobacteria S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA HKD3_k127_1218347_13 868595.Desca_0895 4.088e-73 259.0 COG2043@1|root,COG2043@2|Bacteria,1UYUH@1239|Firmicutes,24APQ@186801|Clostridia,260ZZ@186807|Peptococcaceae 186801|Clostridia S Uncharacterised ArCR, COG2043 - - - - - - - - - - - - DUF169 HKD3_k127_1218347_8 411477.PARMER_03585 5.927e-124 400.0 COG2133@1|root,COG2133@2|Bacteria,4PKJE@976|Bacteroidetes,2FX58@200643|Bacteroidia,231GZ@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 HKD3_k127_1218347_9 1185876.BN8_00013 1.526e-98 333.0 COG1735@1|root,COG1735@2|Bacteria,4NJYF@976|Bacteroidetes,47NZQ@768503|Cytophagia 976|Bacteroidetes S Phosphotriesterase family php - - ko:K07048 - - - - ko00000 - - - PTE HKD3_k127_1218347_16 234267.Acid_4036 1.784e-56 214.0 COG5337@1|root,COG5337@2|Bacteria 2|Bacteria M Spore coat protein CotH - - - - - - - - - - - - CotH,Lectin_C HKD3_k127_1218347_14 234267.Acid_4036 2.227e-62 233.0 COG5337@1|root,COG5337@2|Bacteria 2|Bacteria M Spore coat protein CotH - - - - - - - - - - - - CotH,Lectin_C HKD3_k127_1218347_11 479434.Sthe_0453 6.563e-90 311.0 COG1409@1|root,COG1409@2|Bacteria,2G88X@200795|Chloroflexi,27Z25@189775|Thermomicrobia 189775|Thermomicrobia S Calcineurin-like phosphoesterase - - - - - - - - - - - - Metallophos HKD3_k127_1218347_7 1121448.DGI_0817 8.214e-138 479.0 COG0642@1|root,COG5002@1|root,COG0642@2|Bacteria,COG2205@2|Bacteria,COG5002@2|Bacteria,1NRP8@1224|Proteobacteria,42M0Y@68525|delta/epsilon subdivisions,2WJCX@28221|Deltaproteobacteria,2MH92@213115|Desulfovibrionales 28221|Deltaproteobacteria T PFAM ATP-binding region ATPase domain protein - - - - - - - - - - - - 7TMR-DISMED2,7TMR-DISM_7TM,CHASE,DUF3365,GAF_2,HATPase_c,HisKA,Hpt,PAS,PAS_3,PAS_4,PAS_9,Response_reg HKD3_k127_1218347_17 1123060.JONP01000012_gene2730 6.906e-53 205.0 COG2199@1|root,COG2208@1|root,COG2208@2|Bacteria,COG3706@2|Bacteria,1N4K5@1224|Proteobacteria,2TS77@28211|Alphaproteobacteria,2JYN0@204441|Rhodospirillales 204441|Rhodospirillales KT Sigma factor PP2C-like phosphatases - - - - - - - - - - - - Response_reg,SpoIIE HKD3_k127_1218347_15 207559.Dde_1652 3.716e-62 241.0 COG1480@1|root,COG1480@2|Bacteria,1NCY5@1224|Proteobacteria,42MI9@68525|delta/epsilon subdivisions,2WJI1@28221|Deltaproteobacteria,2M98H@213115|Desulfovibrionales 28221|Deltaproteobacteria S SMART Metal-dependent phosphohydrolase, HD region - - - ko:K07037 - - - - ko00000 - - - 7TM-7TMR_HD,7TMR-HDED,HD HKD3_k127_1218347_18 379066.GAU_0110 2.025e-43 163.0 COG0137@1|root,COG0137@2|Bacteria,1ZTYP@142182|Gemmatimonadetes 142182|Gemmatimonadetes F Arginosuccinate synthase argG - 6.3.4.5 ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 M00029,M00844,M00845 R01954 RC00380,RC00629 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Arginosuc_synth HKD3_k127_1220301_1 204669.Acid345_2395 1.742e-133 444.0 COG0457@1|root,COG0515@1|root,COG5616@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,COG5616@2|Bacteria 2|Bacteria S cAMP biosynthetic process - - 2.7.11.1 ko:K08282,ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase,TPR_16,TPR_2,TPR_8 HKD3_k127_1220301_2 1379270.AUXF01000004_gene3294 1.001e-131 460.0 COG0006@1|root,COG0006@2|Bacteria,1ZSTY@142182|Gemmatimonadetes 2|Bacteria E Creatinase/Prolidase N-terminal domain pepQ - 3.4.13.9 ko:K01271 - - - - ko00000,ko01000,ko01002 - - - Creatinase_N,Peptidase_M24 HKD3_k127_1220301_0 317936.Nos7107_4504 1.766e-163 555.0 COG1132@1|root,COG1132@2|Bacteria,1G0C0@1117|Cyanobacteria,1HJ8H@1161|Nostocales 1117|Cyanobacteria V ABC-type multidrug transport system ATPase and permease - - - ko:K06147 - - - - ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 - - ABC_tran HKD3_k127_1223868_0 1192034.CAP_4308 7.011e-106 363.0 COG1409@1|root,COG1409@2|Bacteria,1R4EJ@1224|Proteobacteria 1224|Proteobacteria S Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - - - - - - - - - - Metallophos HKD3_k127_1223868_2 1123389.ATXJ01000001_gene861 1.22e-44 167.0 COG2905@1|root,COG2905@2|Bacteria,1WJV4@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus T signal-transduction protein containing cAMP-binding and CBS domains - - - - - - - - - - - - CBS HKD3_k127_1223868_1 383372.Rcas_1459 6.934e-86 295.0 COG1612@1|root,COG1612@2|Bacteria,2G75U@200795|Chloroflexi,376ZK@32061|Chloroflexia 32061|Chloroflexia O PFAM cytochrome oxidase assembly - - - ko:K02259 ko00190,ko00860,ko01100,ko01110,ko02020,ko04714,map00190,map00860,map01100,map01110,map02020,map04714 M00154 R07412 RC00769 ko00000,ko00001,ko00002,ko03029 3.D.4.4 - - COX15-CtaA HKD3_k127_1223868_3 1499967.BAYZ01000013_gene6423 2.729e-18 90.0 COG4576@1|root,COG4576@2|Bacteria,2NS06@2323|unclassified Bacteria 2|Bacteria CQ Ethanolamine utilisation protein EutN/carboxysome eutN GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 - ko:K04028 - - - - ko00000 - - - EutN_CcmL HKD3_k127_1223868_4 215803.DB30_2247 4.895e-10 61.0 COG4576@1|root,COG4576@2|Bacteria,1Q0YX@1224|Proteobacteria,434YC@68525|delta/epsilon subdivisions,2WZ99@28221|Deltaproteobacteria,2Z1MJ@29|Myxococcales 28221|Deltaproteobacteria CQ Ethanolamine utilisation protein EutN/carboxysome - - - - - - - - - - - - EutN_CcmL HKD3_k127_1225993_2 1122185.N792_12190 2.299e-49 184.0 COG1215@1|root,COG1215@2|Bacteria,1QU2M@1224|Proteobacteria,1SCHV@1236|Gammaproteobacteria 1236|Gammaproteobacteria M glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 HKD3_k127_1225993_3 452637.Oter_3730 5.637e-35 153.0 COG3509@1|root,COG3509@2|Bacteria 2|Bacteria Q xylan catabolic process - - - - - - - - - - - - CBM9_1,Esterase_phd HKD3_k127_1225993_0 240016.ABIZ01000001_gene4132 1.612e-162 527.0 COG3119@1|root,COG3119@2|Bacteria,46U45@74201|Verrucomicrobia,2IV5A@203494|Verrucomicrobiae 203494|Verrucomicrobiae P Type I phosphodiesterase / nucleotide pyrophosphatase - - - - - - - - - - - - DUF4976,Sulfatase HKD3_k127_1225993_1 243090.RB605 2.959e-111 367.0 COG3119@1|root,COG3119@2|Bacteria,2J1ZQ@203682|Planctomycetes 203682|Planctomycetes P Sulfatase - - - - - - - - - - - - Sulfatase HKD3_k127_1226434_6 926566.Terro_3661 2.775e-20 93.0 COG2911@1|root,COG4775@1|root,COG2911@2|Bacteria,COG4775@2|Bacteria,3Y3A6@57723|Acidobacteria,2JHS8@204432|Acidobacteriia 57723|Acidobacteria M TamB, inner membrane protein subunit of TAM complex - - - ko:K07277,ko:K09800 - - - - ko00000,ko02000,ko03029 1.B.33 - - TamB HKD3_k127_1226434_2 344747.PM8797T_29708 3.39e-159 510.0 COG4409@1|root,COG4409@2|Bacteria,2IYPT@203682|Planctomycetes 2|Bacteria G BNR repeat-like domain - - 3.2.1.18 ko:K01186 ko00511,ko00600,ko04142,map00511,map00600,map04142 - R04018 RC00028,RC00077 ko00000,ko00001,ko01000,ko02042 - GH33 - BNR_2,Big_2,DUF4091,FIVAR,Laminin_G_3 HKD3_k127_1226434_1 497964.CfE428DRAFT_1127 2.39e-199 631.0 COG0469@1|root,COG0469@2|Bacteria 2|Bacteria G pyruvate kinase activity pyk - 2.7.1.40 ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 M00001,M00002,M00049,M00050 R00200,R00430,R01138,R01858,R02320 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 - - - PK,PK_C HKD3_k127_1226434_4 404589.Anae109_0243 1.645e-139 455.0 COG2010@1|root,COG2010@2|Bacteria,1RJJ2@1224|Proteobacteria,42SCM@68525|delta/epsilon subdivisions,2WPS4@28221|Deltaproteobacteria 28221|Deltaproteobacteria C Cytochrome c pcmF - - - - - - - - - - - Cytochrom_C HKD3_k127_1226434_3 404589.Anae109_0242 8.177e-154 495.0 COG1290@1|root,COG1290@2|Bacteria,1MV97@1224|Proteobacteria,42MD6@68525|delta/epsilon subdivisions,2WMNX@28221|Deltaproteobacteria,2Z31Y@29|Myxococcales 28221|Deltaproteobacteria C Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - - - - - - - - - - Cytochrom_B_C,Cytochrome_B HKD3_k127_1226434_5 404589.Anae109_0241 8.237e-47 173.0 COG0723@1|root,COG0723@2|Bacteria,1NINP@1224|Proteobacteria,42VKD@68525|delta/epsilon subdivisions,2WRHY@28221|Deltaproteobacteria 28221|Deltaproteobacteria C PFAM Rieske 2Fe-2S domain pcmE - 1.10.9.1 ko:K02636,ko:K03886 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00151,M00162 R03817,R08409 RC01002 ko00000,ko00001,ko00002,ko00194,ko01000 - - - Rieske HKD3_k127_1226434_7 378806.STAUR_1873 7.623e-14 83.0 2C852@1|root,32YB2@2|Bacteria,1N9HY@1224|Proteobacteria,42WCG@68525|delta/epsilon subdivisions,2WS1H@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Domain of unknown function (DUF4136) - - - - - - - - - - - - DUF4136 HKD3_k127_1226434_0 395964.KE386496_gene3082 2.359e-202 655.0 COG0457@1|root,COG0457@2|Bacteria,1MX2U@1224|Proteobacteria,2TVI2@28211|Alphaproteobacteria,3NA3Z@45404|Beijerinckiaceae 28211|Alphaproteobacteria C Doubled CXXCH motif (Paired_CXXCH_1) - - - - - - - - - - - - Cytochrome_C554,HEAT_2,Paired_CXXCH_1,TPR_14,TPR_16,TPR_19,TPR_2,TPR_8 HKD3_k127_1240964_0 575540.Isop_2400 2.208e-87 300.0 COG1523@1|root,COG1523@2|Bacteria,2IX65@203682|Planctomycetes 203682|Planctomycetes G Carbohydrate-binding module 48 (Isoamylase N-terminal domain) - - 3.2.1.68 ko:K01214 ko00500,ko01100,ko01110,map00500,map01100,map01110 M00565 R09995,R11261 - ko00000,ko00001,ko00002,ko01000 - CBM48,GH13 - Alpha-amylase,CBM_48 HKD3_k127_1240964_1 1120970.AUBZ01000022_gene1310 9.039e-54 201.0 COG0391@1|root,COG0391@2|Bacteria,1NW3K@1224|Proteobacteria,1RQP9@1236|Gammaproteobacteria,468CT@72275|Alteromonadaceae 1236|Gammaproteobacteria S Uncharacterised protein family UPF0052 ybhK - - - - - - - - - - - UPF0052 HKD3_k127_1240964_2 379066.GAU_3854 5.524e-53 196.0 COG3174@1|root,COG3174@2|Bacteria,1ZUTX@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Domain of unknown function (DUF4010) - - - - - - - - - - - - DUF4010,MgtC HKD3_k127_1244658_0 861299.J421_5624 8.122e-117 381.0 COG4948@1|root,COG4948@2|Bacteria 2|Bacteria M carboxylic acid catabolic process - - 3.2.1.20 ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 - R00028,R00801,R00802,R06087,R06088 RC00028,RC00049,RC00077 ko00000,ko00001,ko01000 - GH31 - GH97_C,GH97_N,Glyco_hydro_97 HKD3_k127_1244658_3 1191523.MROS_0856 1.608e-34 138.0 COG2606@1|root,COG2606@2|Bacteria 2|Bacteria S Cys-tRNA(Pro) hydrolase activity - - - ko:K03976,ko:K19055 - - - - ko00000,ko01000,ko03016 - - - tRNA_edit HKD3_k127_1244658_1 1121930.AQXG01000007_gene502 1.192e-81 283.0 COG0491@1|root,COG0491@2|Bacteria,4NHG1@976|Bacteroidetes,1IV1T@117747|Sphingobacteriia 976|Bacteroidetes S Metallo-beta-lactamase superfamily - - - - - - - - - - - - Lactamase_B HKD3_k127_1244658_2 935567.JAES01000031_gene1191 3.216e-35 139.0 COG0488@1|root,COG0488@2|Bacteria,1MU37@1224|Proteobacteria,1RPCU@1236|Gammaproteobacteria,1X49W@135614|Xanthomonadales 135614|Xanthomonadales S mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth uup - - ko:K15738 - - - - ko00000,ko02000 3.A.1.120.6 - - ABC_tran,ABC_tran_CTD,ABC_tran_Xtn HKD3_k127_1244981_2 1038869.AXAN01000022_gene1923 4.11e-22 99.0 2ECC0@1|root,336AD@2|Bacteria,1QAJF@1224|Proteobacteria,2W4H1@28216|Betaproteobacteria,1KEMD@119060|Burkholderiaceae 28216|Betaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_1244981_0 522306.CAP2UW1_1260 1.05e-56 205.0 2EB3I@1|root,33549@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_1244981_1 522306.CAP2UW1_1259 7.888e-52 187.0 COG3900@1|root,COG3900@2|Bacteria,1RD2W@1224|Proteobacteria 1224|Proteobacteria S Predicted periplasmic protein (DUF2092) - - - - - - - - - - - - DUF2092 HKD3_k127_1248975_4 1047013.AQSP01000090_gene667 1.466e-87 299.0 COG0515@1|root,COG0515@2|Bacteria,2NPFQ@2323|unclassified Bacteria 2|Bacteria KLT Serine threonine protein kinase - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase HKD3_k127_1248975_3 518766.Rmar_2679 1.902e-126 412.0 COG0115@1|root,COG0115@2|Bacteria,4NI83@976|Bacteroidetes,1FIW7@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes E Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family ilvE - 2.6.1.42 ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00036,M00119,M00570 R01090,R01214,R02199,R10991 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_4 HKD3_k127_1248975_2 1121920.AUAU01000022_gene2451 6.177e-151 486.0 COG2805@1|root,COG2805@2|Bacteria,3Y316@57723|Acidobacteria 57723|Acidobacteria NU Type II/IV secretion system protein - - - ko:K02669 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - T2SSE HKD3_k127_1248975_9 1120933.ATUY01000001_gene850 1.013e-07 66.0 COG2137@1|root,COG2137@2|Bacteria,2GMRF@201174|Actinobacteria,4D3HR@85005|Actinomycetales 201174|Actinobacteria S Modulates RecA activity recX GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - ko:K03565 - - - - ko00000,ko03400 - - - RecX HKD3_k127_1248975_0 1123368.AUIS01000001_gene1860 8.455e-253 807.0 COG0013@1|root,COG0013@2|Bacteria,1MU9A@1224|Proteobacteria,1RMWZ@1236|Gammaproteobacteria,2NCER@225057|Acidithiobacillales 225057|Acidithiobacillales J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain alaS - 6.1.1.7 ko:K01872 ko00970,map00970 M00359,M00360 R03038 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - DHHA1,tRNA-synt_2c,tRNA_SAD HKD3_k127_1248975_6 370438.PTH_0856 7.993e-35 151.0 COG0741@1|root,COG0741@2|Bacteria,1V6DD@1239|Firmicutes,24JDA@186801|Clostridia,2629Q@186807|Peptococcaceae 186801|Clostridia M PFAM Transglycosylase SLT domain yjbJ - - ko:K08309 - - - - ko00000,ko01000,ko01011 - GH23 - SLT HKD3_k127_1248975_5 1123371.ATXH01000013_gene1513 2.519e-35 146.0 COG2203@1|root,COG2204@1|root,COG2206@1|root,COG2203@2|Bacteria,COG2204@2|Bacteria,COG2206@2|Bacteria,2GIQV@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria T HD domain - - - - - - - - - - - - HD,Response_reg HKD3_k127_1248975_8 204669.Acid345_3546 3.338e-14 76.0 COG0268@1|root,COG0268@2|Bacteria,3Y5CZ@57723|Acidobacteria,2JJS9@204432|Acidobacteriia 204432|Acidobacteriia J Binds directly to 16S ribosomal RNA rpsT - - ko:K02968 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S20p HKD3_k127_1248975_7 448385.sce5298 3.845e-17 94.0 COG1466@1|root,COG1466@2|Bacteria,1RHE9@1224|Proteobacteria,42SNR@68525|delta/epsilon subdivisions,2WP96@28221|Deltaproteobacteria,2Z1UE@29|Myxococcales 28221|Deltaproteobacteria L DNA polymerase III, delta subunit holA - 2.7.7.7 ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_delta HKD3_k127_1248975_10 246197.MXAN_4743 0.0001992 50.0 COG2980@1|root,COG2980@2|Bacteria,1NIUQ@1224|Proteobacteria,42XGJ@68525|delta/epsilon subdivisions,2WSS7@28221|Deltaproteobacteria 28221|Deltaproteobacteria M Lipopolysaccharide-assembly lptE - - - - - - - - - - - LptE HKD3_k127_1248975_1 269799.Gmet_2300 2.546e-199 638.0 COG0495@1|root,COG0495@2|Bacteria,1MV47@1224|Proteobacteria,42MRQ@68525|delta/epsilon subdivisions,2WJ3E@28221|Deltaproteobacteria,43TD1@69541|Desulfuromonadales 28221|Deltaproteobacteria J leucyl-tRNA aminoacylation leuS GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 ko:K01869 ko00970,map00970 M00359,M00360 R03657 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - iAF987.Gmet_2300 Anticodon_1,tRNA-synt_1,tRNA-synt_1_2 HKD3_k127_1261206_1 485913.Krac_2632 4.701e-43 163.0 COG0837@1|root,COG0837@2|Bacteria,2G7R9@200795|Chloroflexi 200795|Chloroflexi H Belongs to the bacterial glucokinase family glk - 2.7.1.2 ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - Glucokinase HKD3_k127_1261206_0 886293.Sinac_0625 1.177e-74 265.0 COG0612@1|root,COG0612@2|Bacteria,2IYKK@203682|Planctomycetes 2|Bacteria S PFAM Peptidase M16 inactive domain pqqL - - ko:K07263 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M16,Peptidase_M16_C HKD3_k127_1263290_6 204669.Acid345_0927 8.364e-39 150.0 COG3234@1|root,COG3234@2|Bacteria,3Y4K7@57723|Acidobacteria,2JMR9@204432|Acidobacteriia 204432|Acidobacteriia S Protein of unknown function (DUF1175) - - - ko:K09934 - - - - ko00000 - - - DUF1175 HKD3_k127_1263290_1 234267.Acid_2300 3.762e-311 1015.0 COG2373@1|root,COG2373@2|Bacteria,3Y439@57723|Acidobacteria 57723|Acidobacteria S Alpha-2-Macroglobulin - - - ko:K06894 - - - - ko00000 - - - A2M,A2M_N,A2M_N_2,A2M_comp,Thiol-ester_cl HKD3_k127_1263290_5 204669.Acid345_0930 1.782e-54 217.0 COG2385@1|root,COG2385@2|Bacteria,3Y370@57723|Acidobacteria,2JM3F@204432|Acidobacteriia 204432|Acidobacteriia D Stage II sporulation protein - - - ko:K06381 - - - - ko00000 - - - SpoIID HKD3_k127_1263290_12 1536775.H70737_07925 0.0004633 53.0 COG0768@1|root,COG0768@2|Bacteria,1TQKI@1239|Firmicutes,4HC5S@91061|Bacilli,26QQE@186822|Paenibacillaceae 91061|Bacilli M Cell division protein FtsI penicillin-binding protein 2 pbpI - - ko:K21468 - - - - ko00000,ko01011 - - - PBP_dimer,Transpeptidase HKD3_k127_1263290_7 234267.Acid_1005 2.29e-35 143.0 COG1073@1|root,COG1073@2|Bacteria,3Y5MV@57723|Acidobacteria 57723|Acidobacteria S Uncharacterised protein family (UPF0227) - - - ko:K07000 - - - - ko00000 - - - UPF0227 HKD3_k127_1263290_0 1047013.AQSP01000142_gene185 0.0 1063.0 COG4447@1|root,COG4447@2|Bacteria,2NQ6W@2323|unclassified Bacteria 2|Bacteria S Por secretion system C-terminal sorting domain-containing protein - - - - - - - - - - - - BNR,Sortilin-Vps10 HKD3_k127_1263290_8 1121013.P873_04770 3.46e-25 110.0 COG2940@1|root,COG2940@2|Bacteria,1MWFB@1224|Proteobacteria,1SAJ4@1236|Gammaproteobacteria,1X5YA@135614|Xanthomonadales 135614|Xanthomonadales S SET domain - - - ko:K07117 - - - - ko00000 - - - SET HKD3_k127_1263290_10 1231185.BAMP01000024_gene2573 1.339e-13 83.0 COG0251@1|root,COG0251@2|Bacteria,1N37K@1224|Proteobacteria,2UBVJ@28211|Alphaproteobacteria,43PN6@69277|Phyllobacteriaceae 28211|Alphaproteobacteria J Endoribonuclease L-PSP yjgF - - - - - - - - - - - Ribonuc_L-PSP HKD3_k127_1263290_9 1437448.AZRT01000008_gene4843 2.572e-18 98.0 COG0251@1|root,COG0251@2|Bacteria,1RD2M@1224|Proteobacteria,2U7PE@28211|Alphaproteobacteria 28211|Alphaproteobacteria J translation initiation inhibitor, yjgF family yjgF - - - - - - - - - - - Ribonuc_L-PSP HKD3_k127_1263290_4 861299.J421_2925 1.547e-56 209.0 COG1666@1|root,COG1666@2|Bacteria,1ZTNB@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Protein of unknown function (DUF520) - - - ko:K09767 - - - - ko00000 - - - DUF520 HKD3_k127_1263290_3 42256.RradSPS_0832 8.981e-68 250.0 COG2339@1|root,COG2339@2|Bacteria,2GKR5@201174|Actinobacteria,4CU00@84995|Rubrobacteria 84995|Rubrobacteria S Protease prsW family - - - - - - - - - - - - PrsW-protease HKD3_k127_1263290_2 880072.Desac_0610 1.343e-139 454.0 COG0863@1|root,COG0863@2|Bacteria,1R8XS@1224|Proteobacteria 1224|Proteobacteria L DNA methylase - - 2.1.1.113 ko:K00590 - - - - ko00000,ko01000,ko02048 - - - N6_N4_Mtase HKD3_k127_1263290_11 240015.ACP_1519 2.666e-09 59.0 COG0587@1|root,COG0587@2|Bacteria,3Y3YK@57723|Acidobacteria,2JKQG@204432|Acidobacteriia 204432|Acidobacteriia L Belongs to the DNA polymerase type-C family. DnaE2 subfamily - - 2.7.7.7 ko:K14162 - - - - ko00000,ko01000,ko03400 - - - DNA_pol3_alpha,HHH_6,PHP,tRNA_anti-codon HKD3_k127_1265930_6 717606.PaecuDRAFT_1035 1.638e-08 66.0 COG3509@1|root,COG3509@2|Bacteria,1TXDN@1239|Firmicutes,4I6BQ@91061|Bacilli,26S03@186822|Paenibacillaceae 91061|Bacilli Q Esterase PHB depolymerase - - - - - - - - - - - - Esterase_phd HKD3_k127_1265930_2 378806.STAUR_7860 7.627e-59 209.0 COG1670@1|root,COG1670@2|Bacteria,1N18Y@1224|Proteobacteria,435YY@68525|delta/epsilon subdivisions,2X0G7@28221|Deltaproteobacteria,2Z0UB@29|Myxococcales 28221|Deltaproteobacteria J Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_3 HKD3_k127_1265930_3 1340493.JNIF01000003_gene2652 2.033e-52 192.0 COG1595@1|root,COG1595@2|Bacteria 2|Bacteria K DNA-templated transcription, initiation - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_ECF,Sigma70_r2,Sigma70_r4_2 HKD3_k127_1265930_1 1266925.JHVX01000001_gene2549 2.894e-77 266.0 COG1814@1|root,COG1814@2|Bacteria,1MUZE@1224|Proteobacteria,2VJ27@28216|Betaproteobacteria,3723D@32003|Nitrosomonadales 28216|Betaproteobacteria S VIT family - - - - - - - - - - - - VIT1 HKD3_k127_1265930_8 323850.Shew_3569 4.043e-06 58.0 COG3678@1|root,COG3678@2|Bacteria,1RBDH@1224|Proteobacteria,1S2DT@1236|Gammaproteobacteria,2QBRQ@267890|Shewanellaceae 1236|Gammaproteobacteria NPTU LTXXQ motif family protein spy GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0008150,GO:0009987,GO:0010033,GO:0014070,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0044464,GO:0050896,GO:0051082,GO:0061077,GO:1990507 - ko:K06006 - - - - ko00000,ko03110 - - - LTXXQ HKD3_k127_1265930_0 1267534.KB906757_gene1007 7.951e-178 579.0 2C0ZI@1|root,2ZAKK@2|Bacteria 2|Bacteria S Heparinase II/III-like protein - - - - - - - - - - - - DUF4962,Hepar_II_III HKD3_k127_1265930_5 518766.Rmar_1168 1.426e-27 121.0 COG1917@1|root,COG1917@2|Bacteria,4P9GY@976|Bacteroidetes,1FKCB@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes S PFAM Cupin 2 conserved barrel domain protein - - - - - - - - - - - - Cupin_2 HKD3_k127_1265930_4 639030.JHVA01000001_gene3190 4.64e-35 137.0 COG1629@1|root,COG4771@2|Bacteria,3Y2WI@57723|Acidobacteria,2JKNG@204432|Acidobacteriia 204432|Acidobacteriia P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg HKD3_k127_1277929_2 1499967.BAYZ01000137_gene108 6.736e-17 80.0 COG2318@1|root,COG2318@2|Bacteria 2|Bacteria S DinB family yjoA - - - - - - - - - - - DinB,DinB_2 HKD3_k127_1277929_1 631362.Thi970DRAFT_00340 3.561e-76 267.0 COG2304@1|root,COG4295@1|root,COG2304@2|Bacteria,COG4295@2|Bacteria,1R389@1224|Proteobacteria,1T64P@1236|Gammaproteobacteria,1WZ2Y@135613|Chromatiales 135613|Chromatiales S von Willebrand factor, type A - - - - - - - - - - - - DUF2263,VWA HKD3_k127_1277929_0 761193.Runsl_2422 3.578e-104 347.0 2DBK2@1|root,2Z9Q1@2|Bacteria,4NET4@976|Bacteroidetes,47MUQ@768503|Cytophagia 976|Bacteroidetes - - - - - - - - - - - - - - - HKD3_k127_1278915_10 1333523.L593_10665 1.088e-34 145.0 COG3291@1|root,COG3325@1|root,arCOG02546@2157|Archaea,arCOG07840@2157|Archaea,2XWCV@28890|Euryarchaeota,23TJG@183963|Halobacteria 183963|Halobacteria G protein contain chitin-binding domain type 3 - - - - - - - - - - - - PKD HKD3_k127_1278915_13 768670.Calni_0229 2.102e-14 81.0 COG0457@1|root,COG0457@2|Bacteria,2GFR1@200930|Deferribacteres 200930|Deferribacteres S Tetratricopeptide repeats - - - - - - - - - - - - TPR_19 HKD3_k127_1278915_7 1121430.JMLG01000038_gene2029 4.058e-76 269.0 COG0006@1|root,COG0006@2|Bacteria,1TQ44@1239|Firmicutes,247SG@186801|Clostridia,260BG@186807|Peptococcaceae 186801|Clostridia E PFAM peptidase M24 pepP - 3.4.11.9,3.4.13.9 ko:K01262,ko:K01271 - - - - ko00000,ko01000,ko01002 - - - Creatinase_N,Peptidase_M24 HKD3_k127_1278915_11 1089553.Tph_c16380 3.308e-33 134.0 COG0511@1|root,COG5016@1|root,COG0511@2|Bacteria,COG5016@2|Bacteria,1VT8P@1239|Firmicutes,247NZ@186801|Clostridia,42EY5@68295|Thermoanaerobacterales 186801|Clostridia C PFAM Conserved carboxylase region pycB - 4.1.1.3,6.4.1.1 ko:K01571,ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 M00173,M00620 R00217,R00344 RC00040,RC00367 ko00000,ko00001,ko00002,ko01000,ko02000 3.B.1.1.1 - - Biotin_lipoyl,HMGL-like,PYC_OADA HKD3_k127_1278915_0 1121920.AUAU01000018_gene1781 3.919e-191 607.0 COG0439@1|root,COG0439@2|Bacteria,3Y2QZ@57723|Acidobacteria 57723|Acidobacteria I acetyl-CoA carboxylase, biotin carboxylase - - 6.3.4.14,6.4.1.2 ko:K01961 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04385 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 - - - Biotin_carb_C,Biotin_carb_N,CPSase_L_D2 HKD3_k127_1278915_1 1120973.AQXL01000126_gene2943 3.819e-155 507.0 COG0531@1|root,COG0531@2|Bacteria,1TQ4K@1239|Firmicutes,4HA66@91061|Bacilli,278R5@186823|Alicyclobacillaceae 91061|Bacilli E C-terminus of AA_permease yhdG - - ko:K03294 - - - - ko00000 2.A.3.2 - - AA_permease_2 HKD3_k127_1278915_6 1123371.ATXH01000001_gene1263 5.441e-79 297.0 COG0490@1|root,COG1226@1|root,COG0490@2|Bacteria,COG1226@2|Bacteria,2GH0E@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria P Ion channel - - - ko:K10716 - - - - ko00000,ko02000 1.A.1.1,1.A.1.13,1.A.1.17,1.A.1.24,1.A.1.25,1.A.1.6 - - Ion_trans_2,TrkA_C,TrkA_N HKD3_k127_1278915_5 234267.Acid_4780 7.083e-97 325.0 COG0190@1|root,COG0190@2|Bacteria,3Y2IN@57723|Acidobacteria 57723|Acidobacteria F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate folD - 1.5.1.5,3.5.4.9 ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R01220,R01655 RC00202,RC00578 ko00000,ko00001,ko00002,ko01000 - - - THF_DHG_CYH,THF_DHG_CYH_C HKD3_k127_1278915_9 235909.GK2727 1.392e-39 154.0 COG0237@1|root,COG0237@2|Bacteria,1V6FS@1239|Firmicutes,4HII3@91061|Bacilli,1WFF5@129337|Geobacillus 91061|Bacilli F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A coaE GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 ko:K00859 ko00770,ko01100,map00770,map01100 M00120 R00130 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - iSB619.SA_RS08510 CoaE HKD3_k127_1278915_12 652103.Rpdx1_2331 1.558e-26 124.0 COG3468@1|root,COG3468@2|Bacteria,1QUZ3@1224|Proteobacteria,2U1BI@28211|Alphaproteobacteria,3JVY2@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria MU ig-like, plexins, transcription factors - - - - - - - - - - - - Autotransporter,TIG HKD3_k127_1278915_8 644282.Deba_1300 4.019e-50 194.0 COG2956@1|root,COG2956@2|Bacteria,1MVDP@1224|Proteobacteria,42UW4@68525|delta/epsilon subdivisions,2WR5T@28221|Deltaproteobacteria 28221|Deltaproteobacteria G Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane - - - ko:K19804 - - - - ko00000 - - - TPR_16,TPR_2,TPR_7,TPR_8 HKD3_k127_1278915_3 243231.GSU1893 1.951e-103 345.0 COG0517@1|root,COG0794@1|root,COG0517@2|Bacteria,COG0794@2|Bacteria,1MUXD@1224|Proteobacteria,42M0M@68525|delta/epsilon subdivisions,2WJ4Y@28221|Deltaproteobacteria,43SXB@69541|Desulfuromonadales 28221|Deltaproteobacteria M Belongs to the SIS family. GutQ KpsF subfamily kdsD - 5.3.1.13 ko:K06041 ko00540,ko01100,map00540,map01100 M00063 R01530 RC00541 ko00000,ko00001,ko00002,ko01000,ko01005 - - iAF987.Gmet_1278 CBS,SIS HKD3_k127_1278915_4 999423.HMPREF9161_00820 4.73e-97 328.0 COG2877@1|root,COG2877@2|Bacteria,1TR2G@1239|Firmicutes,4H20D@909932|Negativicutes 909932|Negativicutes M Belongs to the KdsA family kdsA - 2.5.1.55 ko:K01627 ko00540,ko01100,map00540,map01100 M00063 R03254 RC00435 ko00000,ko00001,ko00002,ko01000,ko01005 - - - DAHP_synth_1 HKD3_k127_1278915_2 240015.ACP_2453 2.079e-137 445.0 COG0504@1|root,COG0504@2|Bacteria,3Y2MH@57723|Acidobacteria,2JID4@204432|Acidobacteriia 204432|Acidobacteriia F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates pyrG - 6.3.4.2 ko:K01937 ko00240,ko01100,map00240,map01100 M00052 R00571,R00573 RC00010,RC00074 ko00000,ko00001,ko00002,ko01000 - - - CTP_synth_N,GATase HKD3_k127_1300007_0 234267.Acid_1388 4.369e-104 348.0 COG0457@1|root,COG0823@1|root,COG0457@2|Bacteria,COG0823@2|Bacteria 2|Bacteria U Involved in the tonB-independent uptake of proteins dppX - - ko:K03641 - - - - ko00000,ko02000 2.C.1.2 - - PD40 HKD3_k127_1300007_1 583355.Caka_0705 9.198e-27 112.0 COG0673@1|root,COG0673@2|Bacteria,46U95@74201|Verrucomicrobia,3K969@414999|Opitutae 414999|Opitutae S PFAM oxidoreductase domain protein - - - - - - - - - - - - GFO_IDH_MocA HKD3_k127_1300066_0 933262.AXAM01000004_gene2415 1.047e-257 821.0 COG0204@1|root,COG0318@1|root,COG0204@2|Bacteria,COG0318@2|Bacteria,1MWDY@1224|Proteobacteria,43BJD@68525|delta/epsilon subdivisions,2WIZT@28221|Deltaproteobacteria 28221|Deltaproteobacteria I phospholipid glycerol acyltransferase - - - - - - - - - - - - AMP-binding,Acyltransferase,MFS_1,PP-binding HKD3_k127_1300066_3 326427.Cagg_1683 1.233e-108 359.0 COG1131@1|root,COG1131@2|Bacteria,2G6HA@200795|Chloroflexi,376NC@32061|Chloroflexia 32061|Chloroflexia V PFAM ABC transporter related - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_1300066_9 326427.Cagg_1684 4.507e-48 200.0 COG1668@1|root,COG1668@2|Bacteria,2G9RA@200795|Chloroflexi 200795|Chloroflexi CP ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_2 HKD3_k127_1300066_7 1278073.MYSTI_01180 1.331e-76 287.0 COG1988@1|root,COG1988@2|Bacteria,1RA9E@1224|Proteobacteria,438D4@68525|delta/epsilon subdivisions,2X3NA@28221|Deltaproteobacteria,2YWMP@29|Myxococcales 28221|Deltaproteobacteria S LexA-binding, inner membrane-associated putative hydrolase - - - ko:K07038 - - - - ko00000 - - - YdjM HKD3_k127_1300066_4 234267.Acid_3699 5.389e-106 360.0 COG2355@1|root,COG2355@2|Bacteria,3Y7FK@57723|Acidobacteria 57723|Acidobacteria E Membrane dipeptidase (Peptidase family M19) - - 3.4.13.19 ko:K01273 - - - - ko00000,ko00537,ko01000,ko01002,ko04147 - - - Peptidase_M19 HKD3_k127_1300066_2 383372.Rcas_3193 6.83e-146 473.0 COG0667@1|root,COG0667@2|Bacteria,2G6BF@200795|Chloroflexi,377XY@32061|Chloroflexia 32061|Chloroflexia C PFAM aldo keto reductase - - - - - - - - - - - - Aldo_ket_red HKD3_k127_1300066_8 1121920.AUAU01000022_gene2463 6.979e-75 256.0 COG0125@1|root,COG0125@2|Bacteria 2|Bacteria F dTDP biosynthetic process tmk GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 ko:K00943 ko00240,ko01100,map00240,map01100 M00053 R02094,R02098 RC00002 ko00000,ko00001,ko00002,ko01000 - - iLJ478.TM1099 AAA_28,Thymidylate_kin HKD3_k127_1300066_11 446466.Cfla_2378 1.724e-18 99.0 2DNJB@1|root,32XT8@2|Bacteria,2H1A6@201174|Actinobacteria 201174|Actinobacteria - - - - - - - - - - - - - - - HKD3_k127_1300066_1 861299.J421_4258 5.154e-172 551.0 COG0513@1|root,COG0513@2|Bacteria,1ZT7G@142182|Gemmatimonadetes 142182|Gemmatimonadetes L DEAD-like helicases superfamily - - 3.6.4.13 ko:K11927 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - DEAD,Helicase_C HKD3_k127_1300066_5 237368.SCABRO_00906 1.391e-90 317.0 COG0612@1|root,COG0612@2|Bacteria,2IYKK@203682|Planctomycetes 203682|Planctomycetes S PFAM Peptidase M16 inactive domain - - - - - - - - - - - - Peptidase_M16,Peptidase_M16_C HKD3_k127_1300066_6 1379698.RBG1_1C00001G0711 4.635e-83 296.0 COG0612@1|root,COG0612@2|Bacteria,2NQHV@2323|unclassified Bacteria 2|Bacteria S Insulinase (Peptidase family M16) ymxG - - ko:K07263 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M16,Peptidase_M16_C HKD3_k127_1300066_10 234267.Acid_6591 3.454e-36 141.0 COG0591@1|root,COG0591@2|Bacteria,3Y4WN@57723|Acidobacteria 57723|Acidobacteria E Sodium:solute symporter family - - - - - - - - - - - - SSF HKD3_k127_1307489_2 204669.Acid345_1390 5.862e-48 174.0 COG1459@1|root,COG1459@2|Bacteria,3Y2X8@57723|Acidobacteria,2JHIX@204432|Acidobacteriia 2|Bacteria NU PFAM Type II secretion system F domain pilC - - ko:K02653 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - T2SSF HKD3_k127_1307489_1 1499967.BAYZ01000027_gene1787 3.418e-85 302.0 COG5000@1|root,COG5000@2|Bacteria,2NP6K@2323|unclassified Bacteria 2|Bacteria T His Kinase A (phosphoacceptor) domain pilS - 2.7.13.3 ko:K02668 ko02020,map02020 M00501 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035 - - - HATPase_c,HisKA,PAS,PAS_4,PAS_9 HKD3_k127_1307489_0 330214.NIDE0779 6.72e-97 333.0 COG2204@1|root,COG2204@2|Bacteria 2|Bacteria T phosphorelay signal transduction system pilR - - ko:K02667 ko02020,map02020 M00501 - - ko00000,ko00001,ko00002,ko02022,ko02035 - - - HTH_8,Response_reg,Sigma54_activat HKD3_k127_1309153_0 760117.JN27_17805 4.205e-70 257.0 COG0612@1|root,COG0612@2|Bacteria,1MVST@1224|Proteobacteria,2VHVB@28216|Betaproteobacteria,472VG@75682|Oxalobacteraceae 28216|Betaproteobacteria S Insulinase (Peptidase family M16) - - - ko:K07263 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M16,Peptidase_M16_C HKD3_k127_1309153_1 1242864.D187_005214 9.939e-17 84.0 COG0612@1|root,COG0612@2|Bacteria,1MVST@1224|Proteobacteria,42N0H@68525|delta/epsilon subdivisions,2WK9P@28221|Deltaproteobacteria,2YU8N@29|Myxococcales 28221|Deltaproteobacteria S Insulinase (Peptidase family M16) - - - ko:K07263 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M16,Peptidase_M16_C HKD3_k127_1322036_5 234267.Acid_7680 2.133e-43 167.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria 2|Bacteria U Involved in the tonB-independent uptake of proteins - - 2.7.11.1 ko:K08884,ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PD40,Pkinase,WD40 HKD3_k127_1322036_2 240016.ABIZ01000001_gene2626 4.251e-136 447.0 COG3119@1|root,COG3119@2|Bacteria,46TFH@74201|Verrucomicrobia,2IV33@203494|Verrucomicrobiae 203494|Verrucomicrobiae P Sulfatase - - - - - - - - - - - - DUF4976,Sulfatase HKD3_k127_1322036_1 926569.ANT_08110 2.987e-167 564.0 COG1940@1|root,COG1940@2|Bacteria 2|Bacteria GK ROK family - - 2.7.1.188,2.7.1.2,2.7.1.214,2.7.1.60,5.1.3.9 ko:K00845,ko:K13967,ko:K19979,ko:K20433 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko00525,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map00525,map01100,map01110,map01120,map01130,map01200 M00001,M00549,M00814,M00815 R00299,R01600,R01786,R02087,R02705,R11185,R11234 RC00002,RC00017,RC00290 ko00000,ko00001,ko00002,ko01000 - - - ROK HKD3_k127_1322036_3 926550.CLDAP_35970 1.196e-129 432.0 COG1820@1|root,COG1820@2|Bacteria,2G6HC@200795|Chloroflexi 200795|Chloroflexi G Belongs to the metallo-dependent hydrolases superfamily. NagA family nagA - 3.5.1.25 ko:K01443 ko00520,ko01130,map00520,map01130 - R02059 RC00166,RC00300 ko00000,ko00001,ko01000 - - - Amidohydro_1 HKD3_k127_1322036_0 1267534.KB906754_gene3849 8.239e-229 728.0 COG0308@1|root,COG0308@2|Bacteria,3Y5B2@57723|Acidobacteria,2JKG0@204432|Acidobacteriia 204432|Acidobacteriia E Peptidase family M1 domain - - - - - - - - - - - - Peptidase_M1 HKD3_k127_1322036_4 1379270.AUXF01000003_gene3552 4.308e-59 229.0 COG3055@1|root,COG3055@2|Bacteria 2|Bacteria G Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - - - - - - - - - - Collagen_bind_2,DUF5060,Kelch_1,Kelch_6,Malectin,NPCBM HKD3_k127_1343292_1 1232410.KI421412_gene110 1.414e-58 213.0 COG2890@1|root,COG2890@2|Bacteria,1MXCQ@1224|Proteobacteria,42PKA@68525|delta/epsilon subdivisions,2WM9R@28221|Deltaproteobacteria,43S3F@69541|Desulfuromonadales 28221|Deltaproteobacteria J Putative RNA methylase family UPF0020 prmC - 2.1.1.297 ko:K02493 - - R10806 RC00003,RC03279 ko00000,ko01000,ko03012 - - - MTS,Methyltransf_25,Methyltransf_31 HKD3_k127_1343292_3 396588.Tgr7_1076 1.585e-47 173.0 COG0537@1|root,COG0537@2|Bacteria,1RDCJ@1224|Proteobacteria,1S3QE@1236|Gammaproteobacteria,1WYPB@135613|Chromatiales 135613|Chromatiales FG PFAM Histidine triad (HIT) protein - - - ko:K02503 - - - - ko00000,ko04147 - - - DcpS_C,HIT HKD3_k127_1343292_2 926569.ANT_28850 7.37e-57 202.0 COG1765@1|root,COG1765@2|Bacteria 2|Bacteria O OsmC-like protein ycaO - - ko:K09136 - - - - ko00000,ko03009 - - - OsmC,YcaO HKD3_k127_1343292_4 935836.JAEL01000060_gene31 5.429e-40 171.0 COG3375@1|root,COG3375@2|Bacteria,1V21D@1239|Firmicutes,4HG3H@91061|Bacilli,1ZDH1@1386|Bacillus 91061|Bacilli M carboxylic acid catabolic process - - - - - - - - - - - - Acetyltransf_1 HKD3_k127_1343292_5 321332.CYB_2318 4.136e-18 98.0 COG1011@1|root,COG1011@2|Bacteria,1G51I@1117|Cyanobacteria,1H0H2@1129|Synechococcus 1117|Cyanobacteria S Haloacid dehalogenase-like hydrolase - - - ko:K07025 - - - - ko00000 - - - HAD_2,Hydrolase HKD3_k127_1343292_6 351746.Pput_4057 0.0003805 51.0 COG2303@1|root,COG2303@2|Bacteria,1MU3F@1224|Proteobacteria,1RPBQ@1236|Gammaproteobacteria,1YYRK@136845|Pseudomonas putida group 1236|Gammaproteobacteria E FAD dependent oxidoreductase - - 1.1.5.9 ko:K19813 ko00030,ko01100,ko01110,ko01130,map00030,map01100,map01110,map01130 - R00305 RC00066 ko00000,ko00001,ko01000 - - - FAD_binding_2,GMC_oxred_C,GMC_oxred_N,NAD_binding_8 HKD3_k127_1343292_0 1125863.JAFN01000001_gene2522 9.377e-321 1006.0 COG0060@1|root,COG0060@2|Bacteria,1MVBQ@1224|Proteobacteria,42MKB@68525|delta/epsilon subdivisions,2WJ4W@28221|Deltaproteobacteria 28221|Deltaproteobacteria J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) ileS - 6.1.1.5 ko:K01870 ko00970,map00970 M00359,M00360 R03656 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,tRNA-synt_1,zf-FPG_IleRS HKD3_k127_1348069_0 1499967.BAYZ01000149_gene6774 1.295e-143 462.0 COG0665@1|root,COG0665@2|Bacteria,2NP0X@2323|unclassified Bacteria 2|Bacteria E FAD dependent oxidoreductase - - 1.5.3.1 ko:K00303 ko00260,ko01100,map00260,map01100 - R00610 RC00060,RC00557 ko00000,ko00001,ko01000 - - - DAO,Fer2_BFD HKD3_k127_1348069_3 1238425.J07HQW2_02656 3.015e-61 222.0 COG1575@1|root,arCOG00480@2157|Archaea 2157|Archaea H Belongs to the MenA family. Type 1 subfamily menA2 - 2.5.1.74 ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R05617,R06858,R10757 RC02935,RC02936,RC03264 ko00000,ko00001,ko00002,ko01000,ko01006 - - - UbiA HKD3_k127_1348069_1 886293.Sinac_3668 8.604e-119 411.0 COG0534@1|root,COG0534@2|Bacteria,2IX5Q@203682|Planctomycetes 203682|Planctomycetes V COG0534 Na -driven multidrug efflux pump - - - ko:K03327 - - - - ko00000,ko02000 2.A.66.1 - - MatE HKD3_k127_1348069_2 903818.KI912268_gene2429 9.105e-88 293.0 COG0231@1|root,COG0231@2|Bacteria,3Y2GH@57723|Acidobacteria 57723|Acidobacteria J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase - - - ko:K02356 - - - - ko00000,ko03012 - - - EFP,EFP_N,Elong-fact-P_C HKD3_k127_1348069_4 518766.Rmar_2387 1.73e-19 95.0 COG3203@1|root,COG3203@2|Bacteria,4NPPT@976|Bacteroidetes 976|Bacteroidetes M Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - - - - - - - - - - - HKD3_k127_1351007_1 761193.Runsl_0035 1.069e-130 434.0 COG0546@1|root,COG2870@1|root,COG0546@2|Bacteria,COG2870@2|Bacteria,4NJ8F@976|Bacteroidetes,47MRA@768503|Cytophagia 976|Bacteroidetes M pfkB family carbohydrate kinase - - - - - - - - - - - - Hydrolase,PfkB HKD3_k127_1351007_3 65393.PCC7424_0275 1.25e-28 130.0 COG0738@1|root,COG0738@2|Bacteria,1GK8Y@1117|Cyanobacteria,3KJKK@43988|Cyanothece 1117|Cyanobacteria G PFAM major facilitator superfamily MFS_1 - - - - - - - - - - - - MFS_1 HKD3_k127_1351007_2 485914.Hmuk_0623 2.493e-80 283.0 COG0673@1|root,arCOG01622@2157|Archaea 2157|Archaea L dehydrogenases and related proteins - - - - - - - - - - - - GFO_IDH_MocA HKD3_k127_1351007_0 1210884.HG799463_gene9466 2.616e-209 659.0 COG4284@1|root,COG4284@2|Bacteria,2IXES@203682|Planctomycetes 203682|Planctomycetes G UTP--glucose-1-phosphate uridylyltransferase - - - - - - - - - - - - UDPGP HKD3_k127_1351909_12 861299.J421_2666 8.787e-73 251.0 COG0508@1|root,COG0508@2|Bacteria,1ZSYJ@142182|Gemmatimonadetes 142182|Gemmatimonadetes C The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) - - 2.3.1.12 ko:K00627 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200 M00307 R00209,R02569 RC00004,RC02742,RC02857 br01601,ko00000,ko00001,ko00002,ko01000 - - - 2-oxoacid_dh,Biotin_lipoyl,E3_binding HKD3_k127_1351909_15 349161.Dred_2967 2.5e-45 172.0 COG0446@1|root,COG0607@1|root,COG2210@1|root,COG0446@2|Bacteria,COG0607@2|Bacteria,COG2210@2|Bacteria,1TPWW@1239|Firmicutes,2484C@186801|Clostridia,2606T@186807|Peptococcaceae 186801|Clostridia P pyridine nucleotide-disulphide oxidoreductase dimerisation cdr - - - - - - - - - - - DrsE_2,Pyr_redox_2,Pyr_redox_dim,Rhodanese,TusA HKD3_k127_1351909_10 1120973.AQXL01000117_gene391 4.096e-81 301.0 COG0491@1|root,COG0607@1|root,COG0491@2|Bacteria,COG0607@2|Bacteria,1TPE2@1239|Firmicutes,4H9WH@91061|Bacilli,278QY@186823|Alicyclobacillaceae 91061|Bacilli P Rhodanese Homology Domain - - - - - - - - - - - - Lactamase_B,Rhodanese HKD3_k127_1351909_18 326427.Cagg_1151 6.364e-17 84.0 COG0425@1|root,COG0425@2|Bacteria,2G7DF@200795|Chloroflexi,377DX@32061|Chloroflexia 32061|Chloroflexia O Belongs to the sulfur carrier protein TusA family - - - - - - - - - - - - TusA HKD3_k127_1351909_3 1304275.C41B8_18181 5.18e-192 612.0 COG0437@1|root,COG3301@1|root,COG0437@2|Bacteria,COG3301@2|Bacteria,1MU1B@1224|Proteobacteria,1SYJH@1236|Gammaproteobacteria 1236|Gammaproteobacteria C 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - - - - - - - - - - Fer4_11,Fer4_3,Fer4_7 HKD3_k127_1351909_0 525909.Afer_1020 0.0 1471.0 COG0243@1|root,COG0243@2|Bacteria,2GNYQ@201174|Actinobacteria,4CNGZ@84992|Acidimicrobiia 84992|Acidimicrobiia C Molybdopterin oxidoreductase Fe4S4 domain - - - - - - - - - - - - Molybdop_Fe4S4,Molybdopterin,Molydop_binding HKD3_k127_1351909_6 497964.CfE428DRAFT_1406 7.788e-105 365.0 COG0038@1|root,COG0517@1|root,COG0038@2|Bacteria,COG0517@2|Bacteria,46S8W@74201|Verrucomicrobia 74201|Verrucomicrobia P PFAM CBS domain containing protein - - - ko:K03281 - - - - ko00000 2.A.49 - - CBS,Voltage_CLC HKD3_k127_1351909_14 1149133.ppKF707_1851 2.436e-51 190.0 COG0584@1|root,COG0584@2|Bacteria,1MW6Z@1224|Proteobacteria,1S3SX@1236|Gammaproteobacteria,1YHMZ@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria C Glycerophosphoryl diester phosphodiesterase family - - 3.1.4.46 ko:K01126 ko00564,map00564 - R01030,R01470 RC00017,RC00425 ko00000,ko00001,ko01000 - - - GDPD HKD3_k127_1351909_16 330214.NIDE0518 7.189e-37 151.0 COG2802@1|root,COG2802@2|Bacteria,3J13Q@40117|Nitrospirae 40117|Nitrospirae S ATP-dependent protease La (LON) substrate-binding domain - - - ko:K07157 - - - - ko00000 - - - LON_substr_bdg HKD3_k127_1351909_7 1340493.JNIF01000003_gene2609 1.551e-97 331.0 COG0492@1|root,COG0492@2|Bacteria,3Y2NX@57723|Acidobacteria 57723|Acidobacteria O L-lysine 6-monooxygenase (NADPH-requiring) - - 1.8.1.9 ko:K00384 ko00450,map00450 - R02016,R03596,R09372 RC00013,RC02518,RC02873 ko00000,ko00001,ko01000 - - - Pyr_redox_3 HKD3_k127_1351909_1 1382359.JIAL01000001_gene12 0.0 1038.0 COG1964@1|root,COG1964@2|Bacteria,3Y2WC@57723|Acidobacteria,2JHTH@204432|Acidobacteriia 204432|Acidobacteriia S Radical SAM - - - - - - - - - - - - Fer4_12,Radical_SAM HKD3_k127_1351909_4 234267.Acid_4340 2.386e-120 398.0 COG1055@1|root,COG1055@2|Bacteria,3Y5VM@57723|Acidobacteria 57723|Acidobacteria P Citrate transporter - - - - - - - - - - - - ArsB,CitMHS HKD3_k127_1351909_11 234267.Acid_1565 3.269e-75 256.0 COG0302@1|root,COG0302@2|Bacteria,3Y2SP@57723|Acidobacteria 57723|Acidobacteria H PFAM GTP cyclohydrolase I folE - 3.5.4.16 ko:K01495 ko00790,ko01100,map00790,map01100 M00126,M00841,M00842,M00843 R00428,R04639,R05046,R05048 RC00263,RC00294,RC00323,RC00945,RC01188 ko00000,ko00001,ko00002,ko01000 - - - GTP_cyclohydroI HKD3_k127_1351909_2 1379698.RBG1_1C00001G0471 6.743e-218 691.0 COG1012@1|root,COG1012@2|Bacteria,2NNR8@2323|unclassified Bacteria 2|Bacteria C Belongs to the aldehyde dehydrogenase family ycbD - 1.2.1.3 ko:K00128,ko:K22187 ko00010,ko00040,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00040,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130 M00135 R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146,R11768 RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500 ko00000,ko00001,ko00002,ko01000 - - - Aldedh HKD3_k127_1351909_19 1038859.AXAU01000018_gene6691 1.061e-16 89.0 COG2105@1|root,COG2105@2|Bacteria,1N80E@1224|Proteobacteria,2U5YU@28211|Alphaproteobacteria,3JY9V@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria S Gamma-glutamyl cyclotransferase, AIG2-like - - - - - - - - - - - - GGACT HKD3_k127_1351909_22 1267535.KB906767_gene703 3.894e-05 55.0 28MK6@1|root,33VBX@2|Bacteria,3Y7JM@57723|Acidobacteria 57723|Acidobacteria - - - - - - - - - - - - - - - HKD3_k127_1351909_17 1047013.AQSP01000128_gene413 1.94e-27 123.0 2DU2Y@1|root,33NQT@2|Bacteria 2|Bacteria S ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_4 HKD3_k127_1351909_9 1047013.AQSP01000128_gene414 2.584e-89 326.0 COG1131@1|root,COG1131@2|Bacteria 2|Bacteria V ATPase activity nosF - - ko:K01990,ko:K19340 ko02010,map02010 M00254,M00762 - - ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.132.2 - - ABC_tran HKD3_k127_1351909_20 661478.OP10G_2310 4.762e-14 82.0 COG1277@1|root,COG1277@2|Bacteria 2|Bacteria - - - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_2,DUF3526 HKD3_k127_1351909_8 1047013.AQSP01000128_gene416 6.823e-94 317.0 COG1131@1|root,COG1131@2|Bacteria,2NQRI@2323|unclassified Bacteria 2|Bacteria V AAA domain, putative AbiEii toxin, Type IV TA system - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_1351909_13 867903.ThesuDRAFT_01461 2.405e-70 243.0 COG2316@1|root,COG2316@2|Bacteria,1TSF7@1239|Firmicutes,24A1B@186801|Clostridia,3WDH1@538999|Clostridiales incertae sedis 186801|Clostridia S Metal dependent phosphohydrolases with conserved 'HD' motif. - - - - - - - - - - - - HD HKD3_k127_1351909_5 1230342.CTM_17726 4.531e-115 387.0 COG0786@1|root,COG0786@2|Bacteria,1TQA4@1239|Firmicutes,247WX@186801|Clostridia,36EF4@31979|Clostridiaceae 186801|Clostridia P Catalyzes the sodium-dependent transport of glutamate gltS - - ko:K03312 - - - - ko00000,ko02000 2.A.27 - - Glt_symporter HKD3_k127_1351909_21 84531.JMTZ01000003_gene2339 1.028e-13 74.0 COG0730@1|root,COG0730@2|Bacteria,1R6MR@1224|Proteobacteria,1S0QW@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Sulfite exporter TauE/SafE - - - - - - - - - - - - TauE HKD3_k127_1353330_2 443143.GM18_0861 2.246e-80 272.0 COG1196@1|root,COG1196@2|Bacteria,1MUAQ@1224|Proteobacteria,42MN9@68525|delta/epsilon subdivisions,2WJZF@28221|Deltaproteobacteria,43T01@69541|Desulfuromonadales 28221|Deltaproteobacteria D Required for chromosome condensation and partitioning smc - - ko:K03529 - - - - ko00000,ko03036 - - - SMC_N,SMC_hinge HKD3_k127_1353330_8 523791.Kkor_0488 8.351e-20 100.0 COG3595@1|root,COG3595@2|Bacteria,1NG89@1224|Proteobacteria,1SCZV@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - DUF4097 HKD3_k127_1353330_3 1382306.JNIM01000001_gene3678 5.126e-62 228.0 COG0501@1|root,COG0501@2|Bacteria,2G6KE@200795|Chloroflexi 200795|Chloroflexi O PFAM peptidase M48 Ste24p - - 3.4.24.84 ko:K06013 ko00900,ko01130,map00900,map01130 - R09845 RC00141 ko00000,ko00001,ko01000,ko01002,ko04147 - - - Peptidase_M48,Peptidase_M48_N HKD3_k127_1353330_10 1144319.PMI16_00807 2.955e-11 69.0 COG1622@1|root,COG1622@2|Bacteria,1NEC9@1224|Proteobacteria,2VWA0@28216|Betaproteobacteria,477JR@75682|Oxalobacteraceae 28216|Betaproteobacteria C Cupredoxin-like domain - - 1.9.3.1 ko:K02275 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.2,3.D.4.4,3.D.4.6 - - Cupredoxin_1 HKD3_k127_1353330_0 204669.Acid345_1995 1.617e-263 835.0 COG1185@1|root,COG1185@2|Bacteria,3Y2UG@57723|Acidobacteria,2JI5F@204432|Acidobacteriia 204432|Acidobacteriia J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction pnp - 2.7.7.8 ko:K00962 ko00230,ko00240,ko03018,map00230,map00240,map03018 M00394 R00437,R00438,R00439,R00440 RC02795 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 - - - KH_1,PNPase,RNase_PH,RNase_PH_C,S1 HKD3_k127_1353330_6 269799.Gmet_1590 1.312e-34 135.0 COG0184@1|root,COG0184@2|Bacteria,1MZ2W@1224|Proteobacteria,42TPZ@68525|delta/epsilon subdivisions,2WQ0P@28221|Deltaproteobacteria,43V8I@69541|Desulfuromonadales 28221|Deltaproteobacteria J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA rpsO GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02956 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S15 HKD3_k127_1353330_5 234267.Acid_6299 4.353e-56 210.0 COG0130@1|root,COG0130@2|Bacteria,3Y3PG@57723|Acidobacteria 57723|Acidobacteria J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs truB - 5.4.99.25 ko:K03177 - - - - ko00000,ko01000,ko03016 - - - TruB_C_2,TruB_N HKD3_k127_1353330_4 278963.ATWD01000001_gene1777 1.655e-58 233.0 COG0618@1|root,COG0618@2|Bacteria,3Y2GZ@57723|Acidobacteria,2JI0W@204432|Acidobacteriia 204432|Acidobacteriia S DHH family - - 3.1.13.3,3.1.3.7 ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 - R00188,R00508 RC00078 ko00000,ko00001,ko01000,ko03400 - - - DHH,DHHA1 HKD3_k127_1353330_7 1121085.AUCI01000008_gene726 4.009e-21 98.0 COG0858@1|root,COG0858@2|Bacteria,1VA0P@1239|Firmicutes,4HII1@91061|Bacilli,1ZGB3@1386|Bacillus 91061|Bacilli J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA rbfA - - ko:K02834 - - - - ko00000,ko03009 - - - RBFA HKD3_k127_1353330_1 234267.Acid_5181 6.621e-233 752.0 COG0532@1|root,COG3266@1|root,COG0532@2|Bacteria,COG3266@2|Bacteria,3Y3UG@57723|Acidobacteria 57723|Acidobacteria J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex infB - - ko:K02519 - - - - ko00000,ko03012,ko03029 - - - GTP_EFTU,GTP_EFTU_D2,IF-2,IF2_N HKD3_k127_1353330_9 240015.ACP_3326 5.006e-12 71.0 COG0195@1|root,COG0195@2|Bacteria,3Y379@57723|Acidobacteria,2JIAX@204432|Acidobacteriia 204432|Acidobacteriia K Participates in both transcription termination and antitermination nusA - - ko:K02600 - - - - ko00000,ko03009,ko03021 - - - HHH_5,KH_5,NusA_N,S1 HKD3_k127_1355945_1 1499967.BAYZ01000119_gene3216 8.022e-166 530.0 COG0574@1|root,COG0574@2|Bacteria,2NQHP@2323|unclassified Bacteria 2|Bacteria G Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - 2.7.9.2 ko:K01007 ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200 M00173,M00374 R00199 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000 - - - NTP_transf_2,PPDK_N,Response_reg HKD3_k127_1355945_3 234267.Acid_3898 3.855e-29 135.0 COG2304@1|root,COG2304@2|Bacteria,3Y3DR@57723|Acidobacteria 2|Bacteria S oxidoreductase activity - - - - - - - - - - - - Big_2,VWA,VWA_2 HKD3_k127_1355945_2 1254432.SCE1572_08425 2.942e-165 533.0 COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,42MK5@68525|delta/epsilon subdivisions,2WJ3Z@28221|Deltaproteobacteria,2YWTM@29|Myxococcales 28221|Deltaproteobacteria C Acyl-CoA dehydrogenase, C-terminal domain - - 1.3.8.1 ko:K00248 ko00071,ko00280,ko00650,ko01100,ko01110,ko01120,ko01200,ko01212,map00071,map00280,map00650,map01100,map01110,map01120,map01200,map01212 - R01175,R01178,R02661,R03172,R04751 RC00052,RC00068,RC00076,RC00120,RC00148 ko00000,ko00001,ko01000 - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N HKD3_k127_1355945_4 243233.MCA0611 2.391e-15 78.0 COG2608@1|root,COG2608@2|Bacteria,1NGBD@1224|Proteobacteria,1THV1@1236|Gammaproteobacteria,1XFT4@135618|Methylococcales 135618|Methylococcales C Heavy-metal-associated domain - - - ko:K07213 ko04978,map04978 - - - ko00000,ko00001 - - - HMA HKD3_k127_1355945_0 1047013.AQSP01000106_gene1771 5.45e-203 650.0 COG0653@1|root,COG0653@2|Bacteria,2NNRK@2323|unclassified Bacteria 2|Bacteria U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane secA2 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0009405,GO:0009605,GO:0009607,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030312,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0035821,GO:0036094,GO:0040007,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043207,GO:0043492,GO:0043952,GO:0044003,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0050896,GO:0051179,GO:0051234,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052564,GO:0052572,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0075136,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4 - - SecA_DEAD,SecA_PP_bind,SecA_SW HKD3_k127_1370154_0 452637.Oter_3628 8.255e-133 436.0 COG4198@1|root,COG4198@2|Bacteria,46S83@74201|Verrucomicrobia,3K7UU@414999|Opitutae 414999|Opitutae S Protein of unknown function (DUF1015) - - - - - - - - - - - - DUF1015 HKD3_k127_1370154_1 1278073.MYSTI_03840 2.087e-39 152.0 COG0545@1|root,COG0545@2|Bacteria 2|Bacteria O Peptidyl-prolyl cis-trans isomerase - - 5.2.1.8 ko:K01802,ko:K03772 - - - - ko00000,ko01000,ko03110 - - - FKBP_C HKD3_k127_1370154_2 324602.Caur_1405 3.092e-33 139.0 COG1404@1|root,COG1404@2|Bacteria,2G7GP@200795|Chloroflexi,375SG@32061|Chloroflexia 32061|Chloroflexia O TIGRFAM LPXTG-motif cell wall anchor domain - - - - - - - - - - - - DUF4397 HKD3_k127_1370154_3 1379270.AUXF01000007_gene873 4.776e-26 109.0 COG2274@1|root,COG2274@2|Bacteria,1ZSX6@142182|Gemmatimonadetes 142182|Gemmatimonadetes V ABC transporter transmembrane region - - - ko:K11085 ko02010,map02010 - - - ko00000,ko00001,ko01000,ko02000 3.A.1.106 - - ABC_membrane,ABC_tran HKD3_k127_1397346_1 1121403.AUCV01000073_gene1306 2.685e-05 56.0 COG1345@1|root,COG1572@1|root,COG1345@2|Bacteria,COG1572@2|Bacteria 2|Bacteria NU bacterial-type flagellum-dependent cell motility - - - ko:K02396,ko:K13276 ko02040,map02040 - - - ko00000,ko00001,ko01000,ko01002,ko02035,ko03110 - - - Flg_bbr_C,Peptidase_S8,TMP_2,VCBS HKD3_k127_1397346_0 1210884.HG799463_gene10120 3.754e-206 646.0 COG2706@1|root,COG2706@2|Bacteria,2IY02@203682|Planctomycetes 203682|Planctomycetes G COG2706 3-carboxymuconate cyclase - - 3.1.1.31 ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 M00004,M00006,M00008 R02035 RC00537 ko00000,ko00001,ko00002,ko01000 - - - Lactonase HKD3_k127_1413702_1 1121920.AUAU01000016_gene1289 3.425e-83 290.0 COG0674@1|root,COG1014@1|root,COG0674@2|Bacteria,COG1014@2|Bacteria 2|Bacteria C Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin - - 1.2.7.11,1.2.7.3 ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - PFOR_II,POR,POR_N,Transketolase_C HKD3_k127_1413702_0 1207063.P24_09306 1.53e-126 412.0 COG1940@1|root,COG1940@2|Bacteria,1MU94@1224|Proteobacteria,2TRRU@28211|Alphaproteobacteria,2JQ4F@204441|Rhodospirillales 204441|Rhodospirillales GK ROK family - - 2.7.1.4 ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 - R00760,R00867,R03920 RC00002,RC00017 ko00000,ko00001,ko01000 - - - ROK HKD3_k127_1413702_2 639030.JHVA01000001_gene1715 5.923e-20 103.0 2BYAI@1|root,315Y9@2|Bacteria,3Y52S@57723|Acidobacteria,2JJJK@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - HKD3_k127_1414072_2 883126.HMPREF9710_04295 2.177e-117 394.0 COG0392@1|root,COG2898@1|root,COG0392@2|Bacteria,COG2898@2|Bacteria,1MXH9@1224|Proteobacteria,2VK9C@28216|Betaproteobacteria,475D7@75682|Oxalobacteraceae 28216|Betaproteobacteria S Lysylphosphatidylglycerol synthase TM region - - 2.3.2.3 ko:K07027,ko:K14205 ko01503,ko02020,ko05150,map01503,map02020,map05150 M00726 - - ko00000,ko00001,ko00002,ko01000,ko01504,ko02000 2.A.1.3.37,4.D.2 - - DUF2156,LPG_synthase_TM HKD3_k127_1414072_8 1128421.JAGA01000002_gene1174 9.282e-07 60.0 COG1073@1|root,COG1073@2|Bacteria,2NQ4V@2323|unclassified Bacteria 2|Bacteria S X-Pro dipeptidyl-peptidase (S15 family) - - - - - - - - - - - - Hydrolase_4 HKD3_k127_1414072_3 1449080.JQMV01000003_gene1736 2.161e-92 312.0 COG0616@1|root,COG0616@2|Bacteria,1WIZG@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus OU COGs COG0616 Periplasmic serine protease (ClpP class) - - - - - - - - - - - - SDH_sah HKD3_k127_1414072_1 1047013.AQSP01000101_gene606 8.206e-159 513.0 COG0006@1|root,COG0006@2|Bacteria,2NP8P@2323|unclassified Bacteria 2|Bacteria E Metallopeptidase family M24 pepQ GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009056,GO:0009987,GO:0016787,GO:0016805,GO:0019538,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0070573,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.11.9,3.4.13.9 ko:K01262,ko:K01271 - - - - ko00000,ko01000,ko01002 - - - AMP_N,Peptidase_M24 HKD3_k127_1414072_9 694431.DESACE_09165 0.0002687 53.0 2E91V@1|root,333B1@2|Bacteria,1NBPB@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - HKD3_k127_1414072_0 580332.Slit_1147 1.539e-210 667.0 COG0446@1|root,COG0446@2|Bacteria,1PJPB@1224|Proteobacteria,2W837@28216|Betaproteobacteria,44WC8@713636|Nitrosomonadales 28216|Betaproteobacteria S Pyridine nucleotide-disulphide oxidoreductase - - 1.8.5.4 ko:K17218 ko00920,map00920 - R10152 RC03155 ko00000,ko00001,ko01000 - - - Pyr_redox_2 HKD3_k127_1414072_7 1121920.AUAU01000015_gene1154 1.275e-12 75.0 2EPT7@1|root,33HDR@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - DUF2231 HKD3_k127_1414072_5 118168.MC7420_553 1.087e-49 186.0 COG1592@1|root,COG1592@2|Bacteria,1G5YD@1117|Cyanobacteria,1HBFD@1150|Oscillatoriales 1117|Cyanobacteria C Rubrerythrin - - - - - - - - - - - - Rubrerythrin HKD3_k127_1414072_4 246197.MXAN_2389 5.267e-57 205.0 COG0386@1|root,COG0386@2|Bacteria,1RD1R@1224|Proteobacteria,42S35@68525|delta/epsilon subdivisions,2WNWS@28221|Deltaproteobacteria,2YV4G@29|Myxococcales 28221|Deltaproteobacteria O Belongs to the glutathione peroxidase family bsaA - 1.11.1.9 ko:K00432 ko00480,ko00590,ko04918,map00480,map00590,map04918 - R00274,R07034,R07035 RC00011,RC00982 ko00000,ko00001,ko01000 - - - GSHPx HKD3_k127_1414072_6 1123277.KB893178_gene2663 1.941e-16 78.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NHS5@976|Bacteroidetes,47MWY@768503|Cytophagia 976|Bacteroidetes EU Peptidase S9 prolyl oligopeptidase active site domain protein - - - - - - - - - - - - PD40,Peptidase_S9 HKD3_k127_1415851_0 204669.Acid345_1010 1.197e-90 310.0 COG0429@1|root,COG0429@2|Bacteria,3Y3MP@57723|Acidobacteria,2JI5X@204432|Acidobacteriia 204432|Acidobacteriia S Serine aminopeptidase, S33 - - - ko:K07019 - - - - ko00000 - - - Abhydrolase_1 HKD3_k127_1415851_1 204669.Acid345_3047 9.495e-23 113.0 COG1999@1|root,COG5569@1|root,COG1999@2|Bacteria,COG5569@2|Bacteria,3Y5CC@57723|Acidobacteria,2JHX0@204432|Acidobacteriia 204432|Acidobacteriia S Copper binding periplasmic protein CusF - - - ko:K07152 - - - - ko00000,ko03029 - - - CusF_Ec,SCO1-SenC HKD3_k127_1446319_3 204669.Acid345_1454 3.198e-115 377.0 COG1884@1|root,COG1884@2|Bacteria,3Y2PQ@57723|Acidobacteria,2JHJN@204432|Acidobacteriia 204432|Acidobacteriia I Methylmalonyl-CoA mutase - - 5.4.99.2 ko:K01848 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00375,M00376,M00741 R00833 RC00395 ko00000,ko00001,ko00002,ko01000 - - - MM_CoA_mutase HKD3_k127_1446319_10 340099.Teth39_0903 2.35e-53 191.0 COG2185@1|root,COG2185@2|Bacteria,1V3QN@1239|Firmicutes,24HAR@186801|Clostridia,42G8Z@68295|Thermoanaerobacterales 186801|Clostridia I PFAM cobalamin B12-binding domain protein - - 5.4.99.2 ko:K01849 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00375,M00376,M00741 R00833 RC00395 ko00000,ko00001,ko00002,ko01000 - - - B12-binding HKD3_k127_1446319_14 404589.Anae109_1476 1.178e-34 147.0 COG0784@1|root,COG0784@2|Bacteria,1QYG7@1224|Proteobacteria,43E8C@68525|delta/epsilon subdivisions,2X7NA@28221|Deltaproteobacteria,2Z11B@29|Myxococcales 28221|Deltaproteobacteria T cheY-homologous receiver domain - - - - - - - - - - - - Response_reg HKD3_k127_1446319_0 1232410.KI421413_gene926 2.768e-312 990.0 COG0525@1|root,COG0525@2|Bacteria,1MV7B@1224|Proteobacteria,42MPZ@68525|delta/epsilon subdivisions,2WIR9@28221|Deltaproteobacteria,43S3P@69541|Desulfuromonadales 28221|Deltaproteobacteria J Valyl tRNA synthetase tRNA binding arm valS GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 ko:K01873 ko00970,map00970 M00359,M00360 R03665 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,Val_tRNA-synt_C,tRNA-synt_1 HKD3_k127_1446319_9 1380390.JIAT01000001_gene5125 2.081e-57 212.0 COG0157@1|root,COG0157@2|Bacteria,2I2IP@201174|Actinobacteria,4CU2Y@84995|Rubrobacteria 84995|Rubrobacteria H Quinolinate phosphoribosyl transferase, C-terminal domain - - 2.4.2.19 ko:K00767 ko00760,ko01100,map00760,map01100 M00115 R03348 RC02877 ko00000,ko00001,ko00002,ko01000 - - - QRPTase_C,QRPTase_N HKD3_k127_1446319_12 635013.TherJR_0220 9.497e-44 172.0 COG0340@1|root,COG1654@1|root,COG0340@2|Bacteria,COG1654@2|Bacteria,1TQCU@1239|Firmicutes,248CK@186801|Clostridia,260CI@186807|Peptococcaceae 186801|Clostridia HK Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor birA - 6.3.4.15 ko:K03524 ko00780,ko01100,map00780,map01100 - R01074,R05145 RC00043,RC00070,RC00096,RC02896 ko00000,ko00001,ko01000,ko03000 - - - BPL_C,BPL_LplA_LipB,HTH_11 HKD3_k127_1446319_8 273068.TTE2381 2.626e-81 278.0 COG1521@1|root,COG1521@2|Bacteria,1TR0X@1239|Firmicutes,248PX@186801|Clostridia,42FD2@68295|Thermoanaerobacterales 186801|Clostridia F Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis coaX - 2.7.1.33 ko:K03525 ko00770,ko01100,map00770,map01100 M00120 R02971,R03018,R04391 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - Pan_kinase HKD3_k127_1446319_18 1382359.JIAL01000001_gene2570 0.0004976 51.0 COG3468@1|root,COG3468@2|Bacteria,3Y4NE@57723|Acidobacteria,2JJBC@204432|Acidobacteriia 204432|Acidobacteriia MU outer membrane autotransporter barrel domain protein - - - - - - - - - - - - - HKD3_k127_1446319_13 240015.ACP_2578 2.933e-41 169.0 COG2265@1|root,COG2265@2|Bacteria,3Y3SF@57723|Acidobacteria,2JI9H@204432|Acidobacteriia 204432|Acidobacteriia J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family - - 2.1.1.190 ko:K03215 - - - - ko00000,ko01000,ko03009 - - - TRAM,tRNA_U5-meth_tr HKD3_k127_1446319_11 1089552.KI911559_gene3307 9.184e-47 177.0 COG2071@1|root,COG2071@2|Bacteria,1MV8E@1224|Proteobacteria,2TSU3@28211|Alphaproteobacteria,2JPIW@204441|Rhodospirillales 204441|Rhodospirillales S Peptidase C26 - - - ko:K07010 - - - - ko00000,ko01002 - - - Peptidase_C26 HKD3_k127_1446319_1 1267535.KB906767_gene1458 6.722e-186 607.0 COG0018@1|root,COG0018@2|Bacteria,3Y35R@57723|Acidobacteria,2JIAM@204432|Acidobacteriia 204432|Acidobacteriia J Belongs to the class-I aminoacyl-tRNA synthetase family - - 6.1.1.19 ko:K01887 ko00970,map00970 M00359,M00360 R03646 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - Arg_tRNA_synt_N,DALR_1,tRNA-synt_1d HKD3_k127_1446319_16 443144.GM21_1097 3.766e-33 137.0 COG0746@1|root,COG0746@2|Bacteria,1PJ8E@1224|Proteobacteria,42VYH@68525|delta/epsilon subdivisions,2WRBB@28221|Deltaproteobacteria 28221|Deltaproteobacteria H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor - - 2.7.7.77 ko:K03752 ko00790,ko01100,map00790,map01100 - R11581 - ko00000,ko00001,ko01000 - - - NTP_transf_3 HKD3_k127_1446319_15 204669.Acid345_2528 1.209e-33 150.0 COG0457@1|root,COG3118@1|root,COG0457@2|Bacteria,COG3118@2|Bacteria,3Y2VC@57723|Acidobacteria,2JHR2@204432|Acidobacteriia 204432|Acidobacteriia O Tetratricopeptide repeat - - - - - - - - - - - - TPR_16,TPR_19 HKD3_k127_1446319_6 706587.Desti_4373 2.313e-95 334.0 COG1030@1|root,COG1030@2|Bacteria,1MUJN@1224|Proteobacteria,42MWM@68525|delta/epsilon subdivisions,2WK3H@28221|Deltaproteobacteria,2MQRK@213462|Syntrophobacterales 28221|Deltaproteobacteria O NfeD-like C-terminal, partner-binding nfeD - - ko:K07403 - - - - ko00000 - - - CLP_protease,NfeD,SDH_sah HKD3_k127_1446319_5 1047013.AQSP01000128_gene429 7.358e-97 342.0 COG0330@1|root,COG0330@2|Bacteria,2NNUC@2323|unclassified Bacteria 2|Bacteria O prohibitin homologues hflC - - - - - - - - - - - Band_7 HKD3_k127_1446319_17 1294143.H681_16660 7.593e-06 56.0 COG3147@1|root,COG3147@2|Bacteria,1N7VS@1224|Proteobacteria 1224|Proteobacteria S Sporulation related domain - - - ko:K03749 - - - - ko00000 - - - SPOR HKD3_k127_1446319_4 269799.Gmet_2367 1.879e-101 354.0 COG0815@1|root,COG0815@2|Bacteria,1MUBU@1224|Proteobacteria,42MPS@68525|delta/epsilon subdivisions,2WIUD@28221|Deltaproteobacteria,43TVN@69541|Desulfuromonadales 28221|Deltaproteobacteria M Transfers the fatty acyl group on membrane lipoproteins lnt - - ko:K03820 - - - - ko00000,ko01000 - GT2 - CN_hydrolase HKD3_k127_1446319_2 1382359.JIAL01000001_gene2101 1.147e-119 395.0 COG1186@1|root,COG1186@2|Bacteria,3Y2ZM@57723|Acidobacteria,2JIGW@204432|Acidobacteriia 204432|Acidobacteriia J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA prfB - - ko:K02836 - - - - ko00000,ko03012 - - - PCRF,RF-1 HKD3_k127_1446319_7 1047013.AQSP01000109_gene2432 2.28e-82 284.0 COG5009@1|root,COG5009@2|Bacteria,2NS4K@2323|unclassified Bacteria 2|Bacteria M Transglycosylase mrcA GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0008955,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042546,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 2.4.1.129,3.4.16.4 ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 - - - ko00000,ko00001,ko01000,ko01003,ko01011 - GT51 iAF987.Gmet_0354 PCB_OB,Transgly,Transpeptidase HKD3_k127_144816_2 404589.Anae109_0699 6.327e-15 91.0 COG4775@1|root,COG4775@2|Bacteria,1RJPJ@1224|Proteobacteria,42TA2@68525|delta/epsilon subdivisions,2WP1H@28221|Deltaproteobacteria,2YZDW@29|Myxococcales 28221|Deltaproteobacteria M Surface antigen - - - - - - - - - - - - Bac_surface_Ag,POTRA HKD3_k127_144816_1 1382359.JIAL01000001_gene2312 3.817e-18 102.0 COG2911@1|root,COG2911@2|Bacteria,3Y3A6@57723|Acidobacteria,2JHS8@204432|Acidobacteriia 204432|Acidobacteriia M TamB, inner membrane protein subunit of TAM complex - - - ko:K09800 - - - - ko00000,ko02000 - - - TamB HKD3_k127_144816_0 517417.Cpar_1493 9.086e-23 98.0 COG0588@1|root,COG0588@2|Bacteria,1FDHF@1090|Chlorobi 1090|Chlorobi F Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate gpmA - 5.4.2.11 ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 - - - His_Phos_1 HKD3_k127_1461336_1 526227.Mesil_2426 3.266e-38 149.0 COG0247@1|root,COG0247@2|Bacteria,1WIPC@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus C Fe-S oxidoreductase - - - - - - - - - - - - CCG,Fer4_8 HKD3_k127_1461336_2 472759.Nhal_2071 6.123e-35 148.0 COG2121@1|root,COG2121@2|Bacteria,1MZID@1224|Proteobacteria,1SEZZ@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Domain of unknown function (DUF374) - - - ko:K09778 - - - - ko00000 - - - DUF374 HKD3_k127_1461336_0 448385.sce6159 7.838e-86 298.0 COG0123@1|root,COG0123@2|Bacteria,1MU7P@1224|Proteobacteria,42NQP@68525|delta/epsilon subdivisions,2WIQD@28221|Deltaproteobacteria,2YUVF@29|Myxococcales 28221|Deltaproteobacteria BQ Histone deacetylase domain - - - - - - - - - - - - Hist_deacetyl HKD3_k127_14659_0 710686.Mycsm_06185 1.946e-27 122.0 COG3391@1|root,COG3391@2|Bacteria,2GK45@201174|Actinobacteria,23EVE@1762|Mycobacteriaceae 201174|Actinobacteria S 40-residue YVTN family beta-propeller repeat - - - - - - - - - - - - Lactonase HKD3_k127_14659_1 765420.OSCT_0391 1.181e-26 120.0 COG0028@1|root,COG2931@1|root,COG3291@1|root,COG0028@2|Bacteria,COG2931@2|Bacteria,COG3291@2|Bacteria 2|Bacteria S metallopeptidase activity - - 4.1.3.1 ko:K01637 ko00630,ko01100,ko01110,ko01120,ko01200,map00630,map01100,map01110,map01120,map01200 M00012 R00479 RC00311,RC00313 ko00000,ko00001,ko00002,ko01000 - - - HemolysinCabind,Laminin_G_3 HKD3_k127_1467257_1 926561.KB900620_gene3087 1.67e-79 281.0 COG1235@1|root,COG1235@2|Bacteria,1V2ET@1239|Firmicutes,24E1K@186801|Clostridia,3WA8A@53433|Halanaerobiales 186801|Clostridia S Metallo-beta-lactamase superfamily - - 3.1.4.55 ko:K06167 ko00440,map00440 - R10205 RC00296 ko00000,ko00001,ko01000 - - - Lactamase_B_2 HKD3_k127_1467257_4 56780.SYN_03047 2.811e-17 94.0 2EAFJ@1|root,334IY@2|Bacteria,1NA2Y@1224|Proteobacteria,42VJ1@68525|delta/epsilon subdivisions,2WRKE@28221|Deltaproteobacteria,2MQME@213462|Syntrophobacterales 28221|Deltaproteobacteria S Domain of unknown function (DUF1844) - - - - - - - - - - - - DUF1844 HKD3_k127_1467257_2 667014.Thein_0776 1.759e-68 246.0 COG1694@1|root,COG3956@2|Bacteria,2GHCS@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria S Phosphoribosyl-ATP pyrophosphohydrolase - - 3.6.1.9 ko:K02499,ko:K04765 ko00230,ko00240,ko00760,ko00770,ko01100,map00230,map00240,map00760,map00770,map01100 - R00086,R00087,R00103,R00287,R00426,R00515,R00662,R00720,R03004,R03036,R11323 RC00002 ko00000,ko00001,ko01000,ko03036 - - - MazG HKD3_k127_1467257_3 671143.DAMO_0319 9.434e-63 243.0 COG0658@1|root,COG2333@1|root,COG0658@2|Bacteria,COG2333@2|Bacteria,2NP4I@2323|unclassified Bacteria 2|Bacteria U Metallo-beta-lactamase superfamily comEC - - ko:K02238 - M00429 - - ko00000,ko00002,ko02044 3.A.11.1,3.A.11.2 - - Competence,DUF4131,Lactamase_B HKD3_k127_1467257_0 204669.Acid345_2197 9.805e-252 795.0 COG0458@1|root,COG0458@2|Bacteria,3Y3GG@57723|Acidobacteria,2JIJZ@204432|Acidobacteriia 204432|Acidobacteriia F TIGRFAM carbamoyl-phosphate synthase, large subunit carB - 6.3.5.5 ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - - CPSase_L_D2,CPSase_L_D3,MGS HKD3_k127_1487837_5 1307759.JOMJ01000003_gene1995 3.821e-37 160.0 COG0535@1|root,COG0535@2|Bacteria 2|Bacteria I radical SAM domain protein - - - - - - - - - - - - Fer4_12,Radical_SAM,SPASM HKD3_k127_1487837_1 886293.Sinac_6462 3.188e-135 438.0 COG0451@1|root,COG0451@2|Bacteria,2IX7V@203682|Planctomycetes 203682|Planctomycetes M PFAM NAD-dependent epimerase dehydratase - - 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 - - - Epimerase,GDP_Man_Dehyd HKD3_k127_1487837_6 1382306.JNIM01000001_gene647 9.325e-35 150.0 COG0859@1|root,COG0859@2|Bacteria 2|Bacteria M ADP-heptose-lipopolysaccharide heptosyltransferase activity - - - - - - - - - - - - Glyco_transf_9 HKD3_k127_1487837_4 926550.CLDAP_02060 6.26e-43 181.0 COG1807@1|root,COG1807@2|Bacteria,2G8SF@200795|Chloroflexi 200795|Chloroflexi M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - - - - - - - - - - PMT_2 HKD3_k127_1487837_2 357808.RoseRS_3868 1.565e-98 348.0 COG0399@1|root,COG0399@2|Bacteria,2G7J4@200795|Chloroflexi,375E3@32061|Chloroflexia 32061|Chloroflexia E aromatic amino acid beta-eliminating lyase threonine aldolase - - - - - - - - - - - - DegT_DnrJ_EryC1 HKD3_k127_1487837_0 324602.Caur_1218 4.925e-136 453.0 COG0451@1|root,COG0451@2|Bacteria,2G7KN@200795|Chloroflexi,375A6@32061|Chloroflexia 32061|Chloroflexia M PFAM NAD-dependent epimerase dehydratase - - 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 - - - Epimerase HKD3_k127_1487837_3 316274.Haur_3900 4.444e-98 326.0 COG1216@1|root,COG1216@2|Bacteria,2GBIQ@200795|Chloroflexi,374ZU@32061|Chloroflexia 32061|Chloroflexia S PFAM glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 HKD3_k127_1502537_0 204669.Acid345_0064 4.29e-143 462.0 COG0465@1|root,COG0465@2|Bacteria,3Y2UK@57723|Acidobacteria,2JI9D@204432|Acidobacteriia 204432|Acidobacteriia O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins ftsH - - ko:K03798 - M00742 - - ko00000,ko00002,ko01000,ko01002,ko03110 - - - AAA,FtsH_ext,Peptidase_M41 HKD3_k127_1502537_1 316067.Geob_3422 1.877e-68 255.0 COG0294@1|root,COG0294@2|Bacteria,1MUIR@1224|Proteobacteria,42MMY@68525|delta/epsilon subdivisions,2WIXA@28221|Deltaproteobacteria 28221|Deltaproteobacteria H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives folP - 2.5.1.15,2.7.6.3 ko:K00796,ko:K13941 ko00790,ko01100,map00790,map01100 M00126,M00840,M00841 R03066,R03067,R03503 RC00002,RC00017,RC00121,RC00842 ko00000,ko00001,ko00002,ko01000 - - - Pterin_bind HKD3_k127_1502537_2 644282.Deba_0764 4.975e-08 63.0 COG1624@1|root,COG1624@2|Bacteria,1PEQT@1224|Proteobacteria,42P5A@68525|delta/epsilon subdivisions,2WKPP@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria dacA - 2.7.7.85 ko:K18672 - - - - ko00000,ko01000 - - - DisA_N HKD3_k127_151439_1 1121104.AQXH01000001_gene1545 5.028e-12 68.0 COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,4NGU2@976|Bacteroidetes,1IWHI@117747|Sphingobacteriia 976|Bacteroidetes M Tricorn protease PDZ domain - - - ko:K08676 - - - - ko00000,ko01000,ko01002 - - - PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ HKD3_k127_151439_0 234267.Acid_5940 1.109e-124 432.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,3Y2PK@57723|Acidobacteria 57723|Acidobacteria KLTU WD40 domain protein beta Propeller - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase HKD3_k127_151439_2 1267535.KB906767_gene2552 1.594e-08 59.0 COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,3Y3BP@57723|Acidobacteria,2JMMF@204432|Acidobacteriia 204432|Acidobacteriia M Tricorn protease PDZ domain - - - ko:K08676 - - - - ko00000,ko01000,ko01002 - - - PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ HKD3_k127_1514757_5 1177154.Y5S_02161 0.0002535 46.0 COG5265@1|root,COG5265@2|Bacteria,1NSKS@1224|Proteobacteria,1T1W9@1236|Gammaproteobacteria,1XHVK@135619|Oceanospirillales 135619|Oceanospirillales V ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components - - - ko:K06147 - - - - ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 - - ABC_membrane,ABC_tran HKD3_k127_1514757_4 362418.IW19_20760 5.462e-10 70.0 COG3637@1|root,COG3637@2|Bacteria,4NVQZ@976|Bacteroidetes,1IAJU@117743|Flavobacteriia,2NV9E@237|Flavobacterium 976|Bacteroidetes M Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - - - - - - - - - - - HKD3_k127_1514757_3 1499967.BAYZ01000103_gene3780 7.309e-33 148.0 COG0457@1|root,COG0457@2|Bacteria 1499967.BAYZ01000103_gene3780|- S peptidyl-tyrosine sulfation - - - - - - - - - - - - - HKD3_k127_1514757_2 1382356.JQMP01000004_gene531 1.131e-47 192.0 COG1971@1|root,COG1971@2|Bacteria,2G8IE@200795|Chloroflexi,27YSN@189775|Thermomicrobia 189775|Thermomicrobia P Probably functions as a manganese efflux pump - - - - - - - - - - - - - HKD3_k127_1514757_1 479434.Sthe_1762 4.742e-52 209.0 COG1971@1|root,COG1971@2|Bacteria,2G8IE@200795|Chloroflexi,27YSN@189775|Thermomicrobia 189775|Thermomicrobia P Probably functions as a manganese efflux pump - - - - - - - - - - - - - HKD3_k127_1514757_0 926566.Terro_2468 4.11e-60 233.0 COG0457@1|root,COG0741@1|root,COG0457@2|Bacteria,COG0741@2|Bacteria,3Y2UJ@57723|Acidobacteria,2JIUE@204432|Acidobacteriia 204432|Acidobacteriia M Transglycosylase SLT domain - - - ko:K08309 - - - - ko00000,ko01000,ko01011 - GH23 - SLT,TPR_16,YfiO HKD3_k127_1537859_11 272943.RSP_0651 2.091e-08 59.0 COG0483@1|root,COG0483@2|Bacteria,1R3TP@1224|Proteobacteria,2TVNC@28211|Alphaproteobacteria,1FD4M@1060|Rhodobacter 28211|Alphaproteobacteria G Inositol monophosphatase family - - 3.1.3.25 ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 M00131 R01185,R01186,R01187 RC00078 ko00000,ko00001,ko00002,ko01000 - - - Inositol_P HKD3_k127_1537859_6 234267.Acid_4819 2.608e-53 212.0 COG0810@1|root,COG4219@1|root,COG0810@2|Bacteria,COG4219@2|Bacteria,3Y8M9@57723|Acidobacteria 57723|Acidobacteria KMT BlaR1 peptidase M56 - - - - - - - - - - - - CarboxypepD_reg,Peptidase_M56,TonB_C HKD3_k127_1537859_7 886293.Sinac_6279 3.745e-43 160.0 COG3682@1|root,COG3682@2|Bacteria,2J0QT@203682|Planctomycetes 203682|Planctomycetes K Penicillinase repressor - - - - - - - - - - - - Penicillinase_R HKD3_k127_1537859_3 682795.AciX8_0622 1.028e-130 423.0 COG0074@1|root,COG0074@2|Bacteria,3Y3UX@57723|Acidobacteria,2JHSN@204432|Acidobacteriia 204432|Acidobacteriia C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit sucD - 6.2.1.5 ko:K01902 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00173,M00374,M00620 R00405,R02404 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000 - - - CoA_binding,Ligase_CoA HKD3_k127_1537859_2 1267535.KB906767_gene3553 3.179e-160 512.0 COG0045@1|root,COG0045@2|Bacteria,3Y36X@57723|Acidobacteria,2JHR1@204432|Acidobacteriia 204432|Acidobacteriia C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit sucC - 6.2.1.5 ko:K01903 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00173,M00374,M00620 R00405,R02404 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000 - - - ATP-grasp_2,Ligase_CoA HKD3_k127_1537859_10 926550.CLDAP_31820 1.797e-27 131.0 COG5617@1|root,COG5617@2|Bacteria 2|Bacteria M Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - HKD3_k127_1537859_8 862908.BMS_2196 1.165e-40 170.0 2CAZH@1|root,2Z7RU@2|Bacteria,1N3AE@1224|Proteobacteria,42UBH@68525|delta/epsilon subdivisions,2MT2C@213481|Bdellovibrionales,2WQ56@28221|Deltaproteobacteria 213481|Bdellovibrionales - - sdhC - - ko:K00241 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002 - - - - HKD3_k127_1537859_0 324602.Caur_1881 5.724e-319 1002.0 COG1053@1|root,COG1053@2|Bacteria,2G5YB@200795|Chloroflexi,374WX@32061|Chloroflexia 32061|Chloroflexia C TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit - - 1.3.5.1,1.3.5.4 ko:K00239 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 - - - FAD_binding_2,Succ_DH_flav_C HKD3_k127_1537859_4 886379.AEWI01000012_gene1056 6.325e-100 359.0 COG0479@1|root,COG0479@2|Bacteria,4NFR3@976|Bacteroidetes,2FP6Q@200643|Bacteroidia,3XJ2Z@558415|Marinilabiliaceae 976|Bacteroidetes C 2Fe-2S iron-sulfur cluster binding domain frdB - 1.3.5.1,1.3.5.4 ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 - - - Fer2_3,Fer4_7,Fer4_8 HKD3_k127_1537859_5 448385.sce7917 2.975e-72 258.0 COG1388@1|root,COG3770@1|root,COG1388@2|Bacteria,COG3770@2|Bacteria,1MU9I@1224|Proteobacteria,42VK7@68525|delta/epsilon subdivisions,2WS1M@28221|Deltaproteobacteria,2YVMA@29|Myxococcales 28221|Deltaproteobacteria M LysM domain protein mepA - - ko:K07261 - - - - ko00000,ko01000,ko01002,ko01011 - - - LysM,Peptidase_M74 HKD3_k127_1537859_1 377629.TERTU_2308 9.506e-192 617.0 COG4146@1|root,COG4146@2|Bacteria,1MXWV@1224|Proteobacteria,1RR4S@1236|Gammaproteobacteria,2PN6F@256005|Alteromonadales genera incertae sedis 1236|Gammaproteobacteria S Sodium:solute symporter family sglT - - ko:K03307 - - - - ko00000 2.A.21 - - SSF HKD3_k127_1537859_9 314285.KT71_01620 2.76e-33 134.0 COG4805@1|root,COG4805@2|Bacteria,1R4HM@1224|Proteobacteria,1SKZF@1236|Gammaproteobacteria,1J9TG@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria S Bacterial protein of unknown function (DUF885) - - - - - - - - - - - - - HKD3_k127_1543125_0 929556.Solca_1540 2.51e-122 412.0 COG0383@1|root,COG0383@2|Bacteria,4NGF5@976|Bacteroidetes,1IPJQ@117747|Sphingobacteriia 976|Bacteroidetes G Glycosyl hydrolases family 38 N-terminal domain - - - - - - - - - - - - Glyco_hydro_38,Glyco_hydro_38C HKD3_k127_155801_5 234267.Acid_7032 5.555e-19 101.0 COG2271@1|root,COG2271@2|Bacteria,3Y3FW@57723|Acidobacteria 57723|Acidobacteria G Organic Anion Transporter Polypeptide (OATP) family - - - - - - - - - - - - MFS_1 HKD3_k127_155801_0 595460.RRSWK_05564 3.99e-240 756.0 COG3408@1|root,COG3408@2|Bacteria,2J3P7@203682|Planctomycetes 203682|Planctomycetes G Bacterial alpha-L-rhamnosidase C-terminal domain - - - - - - - - - - - - Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C HKD3_k127_155801_3 525367.HMPREF0556_10766 2.135e-104 370.0 COG1455@1|root,COG1455@2|Bacteria,1TP8D@1239|Firmicutes,4H9W2@91061|Bacilli,26ITP@186820|Listeriaceae 91061|Bacilli G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane celD - - ko:K02761 ko00500,ko02060,map00500,map02060 M00275 R11170,R11172 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.3.2 - - PTS_EIIC HKD3_k127_155801_1 357808.RoseRS_3954 4.169e-112 378.0 COG0399@1|root,COG0399@2|Bacteria,2G7WW@200795|Chloroflexi,37751@32061|Chloroflexia 32061|Chloroflexia E aromatic amino acid beta-eliminating lyase threonine aldolase - - - - - - - - - - - - DegT_DnrJ_EryC1 HKD3_k127_155801_4 649638.Trad_0164 6.205e-54 205.0 COG0454@1|root,COG0456@2|Bacteria,1WJ43@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus K PFAM Acetyltransferase (GNAT) family - - - - - - - - - - - - Acetyltransf_1 HKD3_k127_155801_2 1380391.JIAS01000012_gene4362 2.388e-105 359.0 COG3525@1|root,COG3525@2|Bacteria,1QR2G@1224|Proteobacteria,2UDYI@28211|Alphaproteobacteria 28211|Alphaproteobacteria G beta-N-acetylglucosaminidase - GO:0003674,GO:0003824,GO:0004553,GO:0004563,GO:0005975,GO:0006464,GO:0006517,GO:0006807,GO:0008150,GO:0008152,GO:0009100,GO:0009987,GO:0015929,GO:0016231,GO:0016787,GO:0016798,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901135,GO:1901564 - - - - - - - - - - NAGidase HKD3_k127_1565647_2 234267.Acid_3262 5.079e-30 129.0 COG0457@1|root,COG0515@1|root,COG5616@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,COG5616@2|Bacteria 234267.Acid_3262|- S cAMP biosynthetic process - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - - HKD3_k127_1565647_0 713587.THITH_12520 7.207e-111 368.0 COG1313@1|root,COG1313@2|Bacteria,1NZAK@1224|Proteobacteria 1224|Proteobacteria C radical SAM domain protein - - 1.97.1.4 ko:K04070 - - - - ko00000,ko01000 - - - Fer4_12,Radical_SAM HKD3_k127_1565647_1 1128421.JAGA01000002_gene1840 7.781e-69 238.0 COG2270@1|root,COG2270@2|Bacteria,2NP3G@2323|unclassified Bacteria 2|Bacteria S Vacuole effluxer Atg22 like yxiO - - ko:K06902 ko04138,map04138 - - - ko00000,ko00001,ko02000,ko04131 2.A.1.24,9.A.15.1 - - ATG22,MFS_1 HKD3_k127_1587055_0 1396141.BATP01000005_gene6079 2.177e-84 291.0 COG1131@1|root,COG1131@2|Bacteria,46U5D@74201|Verrucomicrobia 74201|Verrucomicrobia V ATPases associated with a variety of cellular activities - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_1600354_10 1121920.AUAU01000004_gene858 2.349e-90 304.0 COG0119@1|root,COG0119@2|Bacteria,3Y2NJ@57723|Acidobacteria 57723|Acidobacteria E HMGL-like - - 4.1.3.4 ko:K01640 ko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146 M00036,M00088 R01360,R08090 RC00502,RC00503,RC01118,RC01946 ko00000,ko00001,ko00002,ko01000 - - - HMGL-like HKD3_k127_1600354_3 1121920.AUAU01000004_gene859 1.612e-182 576.0 COG0473@1|root,COG0473@2|Bacteria,3Y2VW@57723|Acidobacteria 57723|Acidobacteria CE Isocitrate/isopropylmalate dehydrogenase - - 1.1.1.85 ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R00994,R04426,R10052 RC00084,RC00417,RC03036 br01601,ko00000,ko00001,ko00002,ko01000 - - - Iso_dh HKD3_k127_1600354_18 240015.ACP_2406 8.406e-42 160.0 COG0071@1|root,COG0071@2|Bacteria,3Y4TM@57723|Acidobacteria,2JJFI@204432|Acidobacteriia 204432|Acidobacteriia O Belongs to the small heat shock protein (HSP20) family - - - ko:K13993 ko04141,map04141 - - - ko00000,ko00001,ko03110 - - - HSP20 HKD3_k127_1600354_5 204669.Acid345_0501 5.337e-151 504.0 COG0154@1|root,COG0154@2|Bacteria,3Y2PE@57723|Acidobacteria,2JIE0@204432|Acidobacteriia 204432|Acidobacteriia J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) gatA - 6.3.5.6,6.3.5.7 ko:K02433 ko00970,ko01100,map00970,map01100 - R03905,R04212 RC00010 ko00000,ko00001,ko01000,ko03029 - - - Amidase HKD3_k127_1600354_23 404589.Anae109_4339 1.456e-07 57.0 COG0721@1|root,COG0721@2|Bacteria,1QE6H@1224|Proteobacteria,42VPR@68525|delta/epsilon subdivisions,2WRP0@28221|Deltaproteobacteria,2YW6Q@29|Myxococcales 28221|Deltaproteobacteria J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) gatC - 6.3.5.6,6.3.5.7 ko:K02435 ko00970,ko01100,map00970,map01100 - R03905,R04212 RC00010 ko00000,ko00001,ko01000,ko03029 - - iAF987.Gmet_0076 Glu-tRNAGln HKD3_k127_1600354_14 56780.SYN_00074 3.507e-64 230.0 COG1355@1|root,COG1355@2|Bacteria,1MXK5@1224|Proteobacteria,42R55@68525|delta/epsilon subdivisions,2WN4E@28221|Deltaproteobacteria,2MQCK@213462|Syntrophobacterales 28221|Deltaproteobacteria S Memo-like protein - - - ko:K06990 - - - - ko00000,ko04812 - - - Memo HKD3_k127_1600354_20 573370.DMR_28890 4.42e-39 156.0 COG2078@1|root,COG2078@2|Bacteria,1RJP4@1224|Proteobacteria,42SBG@68525|delta/epsilon subdivisions,2WP66@28221|Deltaproteobacteria,2MB3T@213115|Desulfovibrionales 28221|Deltaproteobacteria S PFAM AMMECR1 domain protein - - - ko:K09141 - - - - ko00000 - - - AMMECR1 HKD3_k127_1600354_19 1121920.AUAU01000009_gene1899 4.282e-40 160.0 28JI8@1|root,2Z9BM@2|Bacteria,3Y535@57723|Acidobacteria 57723|Acidobacteria S S1/P1 Nuclease - - - - - - - - - - - - S1-P1_nuclease HKD3_k127_1600354_7 1267533.KB906736_gene898 3.87e-97 334.0 COG1044@1|root,COG1044@2|Bacteria,3Y2JC@57723|Acidobacteria,2JI2Y@204432|Acidobacteriia 204432|Acidobacteriia M Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell lpxD - 2.3.1.191 ko:K02536 ko00540,ko01100,map00540,map01100 M00060 R04550 RC00039,RC00166 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Hexapep,LpxD HKD3_k127_1600354_11 1234364.AMSF01000025_gene3728 1.125e-87 319.0 COG0612@1|root,COG0612@2|Bacteria,1MVST@1224|Proteobacteria,1RN05@1236|Gammaproteobacteria,1X5E6@135614|Xanthomonadales 135614|Xanthomonadales S Insulinase (Peptidase family M16) - - - ko:K07263 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M16,Peptidase_M16_C HKD3_k127_1600354_13 1183438.GKIL_3768 1.428e-75 288.0 COG0612@1|root,COG0612@2|Bacteria,1G303@1117|Cyanobacteria 1117|Cyanobacteria S PFAM Peptidase M16 inactive domain - - - ko:K07263 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M16,Peptidase_M16_C HKD3_k127_1600354_9 269799.Gmet_2350 2.964e-93 319.0 COG0763@1|root,COG0763@2|Bacteria,1MVBI@1224|Proteobacteria,42P35@68525|delta/epsilon subdivisions,2WJFA@28221|Deltaproteobacteria,43SZS@69541|Desulfuromonadales 28221|Deltaproteobacteria M Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell lpxB GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 ko:K00748 ko00540,ko01100,map00540,map01100 M00060 R04606 RC00005,RC00059 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT19 - LpxB HKD3_k127_1600354_0 1120950.KB892748_gene3229 0.0 1144.0 COG1048@1|root,COG1048@2|Bacteria,2GJD5@201174|Actinobacteria,4DPP4@85009|Propionibacteriales 201174|Actinobacteria C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate acnA GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0005506,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0008198,GO:0009060,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0015980,GO:0016020,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0030312,GO:0030350,GO:0032787,GO:0040007,GO:0042221,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046459,GO:0046872,GO:0046914,GO:0047456,GO:0048037,GO:0050896,GO:0051536,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:1901363 4.2.1.3 ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00173,M00740 R01324,R01325,R01900 RC00497,RC00498,RC00618 br01601,ko00000,ko00001,ko00002,ko01000 - - - Aconitase,Aconitase_C HKD3_k127_1600354_12 671143.DAMO_2824 7.186e-84 292.0 COG1600@1|root,COG1600@2|Bacteria,2NNWV@2323|unclassified Bacteria 2|Bacteria C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) queG GO:0003674,GO:0003824,GO:0006091,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009055,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0022900,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 ko:K18979 - - - - ko00000,ko01000,ko03016 - - - DUF1730,Fer4_16 HKD3_k127_1600354_8 1133850.SHJG_1726 1.074e-96 335.0 COG3590@1|root,COG3590@2|Bacteria,2GW6H@201174|Actinobacteria 201174|Actinobacteria O peptidase - - - - - - - - - - - - - HKD3_k127_1600354_4 243231.GSU0193 2.363e-161 518.0 COG2133@1|root,COG2133@2|Bacteria,1MVK5@1224|Proteobacteria,42MU3@68525|delta/epsilon subdivisions,2WKTF@28221|Deltaproteobacteria,43SSU@69541|Desulfuromonadales 28221|Deltaproteobacteria G Glucose / Sorbosone dehydrogenase - - - - - - - - - - - - GSDH HKD3_k127_1600354_2 246197.MXAN_6050 2.023e-236 748.0 COG0457@1|root,COG0457@2|Bacteria,1Q3YA@1224|Proteobacteria,437VH@68525|delta/epsilon subdivisions,2X354@28221|Deltaproteobacteria,2YUAY@29|Myxococcales 28221|Deltaproteobacteria S Peptidase family M49 - - - - - - - - - - - - Peptidase_M49 HKD3_k127_1600354_21 987059.RBXJA2T_08760 1.318e-14 77.0 COG2331@1|root,COG2331@2|Bacteria,1PVEY@1224|Proteobacteria,2VYJG@28216|Betaproteobacteria,1KP71@119065|unclassified Burkholderiales 28216|Betaproteobacteria S Putative regulatory protein - - - - - - - - - - - - Zn-ribbon_8 HKD3_k127_1600354_6 521045.Kole_0017 4.139e-142 467.0 COG0073@1|root,COG0143@1|root,COG0073@2|Bacteria,COG0143@2|Bacteria,2GCDP@200918|Thermotogae 200918|Thermotogae J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation metG GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 ko:K01874 ko00450,ko00970,map00450,map00970 M00359,M00360 R03659,R04773 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,tRNA-synt_1g,tRNA_bind HKD3_k127_1600354_16 1122603.ATVI01000005_gene3775 8.714e-60 215.0 COG3607@1|root,COG3607@2|Bacteria,1RH1T@1224|Proteobacteria,1S6FE@1236|Gammaproteobacteria,1X739@135614|Xanthomonadales 135614|Xanthomonadales S glyoxalase bleomycin resistance protein dioxygenase - - - ko:K07032 - - - - ko00000 - - - - HKD3_k127_1600354_17 754476.Q7A_2685 4.824e-54 192.0 COG4898@1|root,COG4898@2|Bacteria,1RHGW@1224|Proteobacteria,1S7UZ@1236|Gammaproteobacteria 1236|Gammaproteobacteria S protein conserved in bacteria - - - - - - - - - - - - DUF2200 HKD3_k127_1600354_15 1254432.SCE1572_33155 2.073e-63 226.0 COG0667@1|root,COG0667@2|Bacteria,1NWQE@1224|Proteobacteria,42ZW2@68525|delta/epsilon subdivisions,2WVDI@28221|Deltaproteobacteria,2YVXI@29|Myxococcales 28221|Deltaproteobacteria C Aldo/keto reductase family - - - - - - - - - - - - Aldo_ket_red,HEAT_2 HKD3_k127_1600354_1 661478.OP10G_3387 8.094e-246 775.0 COG3250@1|root,COG3387@1|root,COG3250@2|Bacteria,COG3387@2|Bacteria 2|Bacteria G glucan 1,4-alpha-glucosidase activity - - - - - - - - - - - - DUF1793,DUF4964,DUF4965,DUF5127,RicinB_lectin_2 HKD3_k127_1632338_1 1047013.AQSP01000122_gene2251 1.126e-103 350.0 COG0465@1|root,COG0465@2|Bacteria,2NNQ5@2323|unclassified Bacteria 2|Bacteria O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins ftsH GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - ko:K03798 - M00742 - - ko00000,ko00002,ko01000,ko01002,ko03110 - - - AAA,FtsH_ext,Peptidase_M41 HKD3_k127_1632338_4 477974.Daud_0086 3.673e-80 286.0 COG0037@1|root,COG0037@2|Bacteria,1TPXP@1239|Firmicutes,248TY@186801|Clostridia,260U4@186807|Peptococcaceae 186801|Clostridia D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine tilS - 6.3.4.19 ko:K04075 - - R09597 RC02633,RC02634 ko00000,ko01000,ko03016 - - - ATP_bind_3,TilS,TilS_C HKD3_k127_1632338_0 1128421.JAGA01000003_gene3695 2.716e-111 367.0 COG0338@1|root,COG0338@2|Bacteria 2|Bacteria L D12 class N6 adenine-specific DNA methyltransferase dam - 2.1.1.72 ko:K06223 ko03430,map03430 - - - ko00000,ko00001,ko01000,ko02048,ko03032,ko03400 - - - MethyltransfD12 HKD3_k127_1632338_7 1123242.JH636435_gene2750 8.054e-38 164.0 COG1943@1|root,COG1943@2|Bacteria,2IYXS@203682|Planctomycetes 203682|Planctomycetes L Transposase IS200 like - - - ko:K07491 - - - - ko00000 - - - Y1_Tnp HKD3_k127_1632338_2 330214.NIDE4314 1.656e-100 337.0 COG1899@1|root,COG1899@2|Bacteria 2|Bacteria O peptidyl-lysine modification to peptidyl-hypusine - - - - - - - - - - - - - HKD3_k127_1632338_5 1123237.Salmuc_03926 3.352e-61 223.0 COG0682@1|root,COG0682@2|Bacteria,1MVE3@1224|Proteobacteria,2TTNS@28211|Alphaproteobacteria 2|Bacteria M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins lgt GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008961,GO:0009249,GO:0009987,GO:0010467,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0031224,GO:0031226,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0051604,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.1.1.199 ko:K03438,ko:K13292 - - - - ko00000,ko01000,ko03009 - - - LGT HKD3_k127_1632338_3 198467.NP92_11790 9.306e-95 328.0 COG0809@1|root,COG0809@2|Bacteria,1TPKD@1239|Firmicutes,4H9PT@91061|Bacilli,21WJG@150247|Anoxybacillus 91061|Bacilli J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) queA GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 ko:K07568 - - - - ko00000,ko01000,ko03016 - - - Queuosine_synth HKD3_k127_1632338_9 118161.KB235922_gene3278 3.579e-27 118.0 2DMJE@1|root,32RYR@2|Bacteria,1G6SI@1117|Cyanobacteria,3VJT2@52604|Pleurocapsales 1117|Cyanobacteria S Domain of unknown function (DUF4112) - - - - - - - - - - - - DUF4112 HKD3_k127_1632338_6 240015.ACP_3048 1.508e-57 203.0 COG0332@1|root,COG0332@2|Bacteria,3Y2Z5@57723|Acidobacteria,2JIAW@204432|Acidobacteriia 204432|Acidobacteriia I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids fabH - 2.3.1.180 ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00082,M00083 R10707 RC00004,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - ACP_syn_III,ACP_syn_III_C HKD3_k127_1682246_0 1348657.M622_16965 6.383e-147 478.0 28H52@1|root,2Z7HQ@2|Bacteria,1MXTF@1224|Proteobacteria,2VJJ3@28216|Betaproteobacteria 28216|Betaproteobacteria S Protein of unknown function (DUF1329) - - - - - - - - - - - - DUF1329 HKD3_k127_1682246_1 1348657.M622_13695 2.314e-05 47.0 COG3203@1|root,COG3203@2|Bacteria,1MXEB@1224|Proteobacteria,2VPRW@28216|Betaproteobacteria 28216|Betaproteobacteria M Protein of unknown function (DUF1302) - - - - - - - - - - - - DUF1302 HKD3_k127_1707732_11 234267.Acid_0024 7e-18 93.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,3Y3FE@57723|Acidobacteria 2|Bacteria KU WD40 domain protein beta Propeller - - 2.7.11.1 ko:K08884,ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PD40,Pkinase,WD40 HKD3_k127_1707732_1 713586.KB900536_gene2819 1.467e-118 399.0 COG2230@1|root,COG2230@2|Bacteria,1MX3U@1224|Proteobacteria,1S1KY@1236|Gammaproteobacteria,1X28H@135613|Chromatiales 135613|Chromatiales M Mycolic acid cyclopropane synthetase - - 2.1.1.79 ko:K00574 - - - - ko00000,ko01000 - - - CMAS HKD3_k127_1707732_3 713586.KB900536_gene2820 7.219e-96 330.0 COG0644@1|root,COG0644@2|Bacteria,1MXQY@1224|Proteobacteria,1SEJ8@1236|Gammaproteobacteria 1236|Gammaproteobacteria C geranylgeranyl reductase - - - - - - - - - - - - FAD_binding_3 HKD3_k127_1707732_0 1123242.JH636435_gene1068 2.228e-255 810.0 COG1053@1|root,COG1053@2|Bacteria,2IYNS@203682|Planctomycetes 203682|Planctomycetes C FAD dependent oxidoreductase - - - - - - - - - - - - FAD_oxidored HKD3_k127_1707732_10 575540.Isop_2930 5.772e-24 109.0 COG3258@1|root,COG3258@2|Bacteria,2J1GU@203682|Planctomycetes 203682|Planctomycetes C Protein of unknown function (DUF3365) - - - - - - - - - - - - DUF3365 HKD3_k127_1707732_8 1042156.CXIVA_23810 1.608e-38 156.0 COG0535@1|root,COG0535@2|Bacteria,1TSAT@1239|Firmicutes,24A6W@186801|Clostridia,36HJS@31979|Clostridiaceae 186801|Clostridia S Radical SAM superfamily - - - - - - - - - - - - Fer4_12,Fer4_14,Radical_SAM HKD3_k127_1707732_6 696281.Desru_0439 7.389e-59 227.0 COG0635@1|root,COG0635@2|Bacteria,1TPES@1239|Firmicutes,247P8@186801|Clostridia,260TE@186807|Peptococcaceae 186801|Clostridia H Involved in the biosynthesis of porphyrin-containing compound - - - - - - - - - - - - Radical_SAM HKD3_k127_1707732_12 1123270.ATUR01000010_gene1903 0.0008459 49.0 2EA9M@1|root,334E1@2|Bacteria,1ND0N@1224|Proteobacteria,2UIJ1@28211|Alphaproteobacteria,2K8CC@204457|Sphingomonadales 204457|Sphingomonadales S CHRD domain - - - - - - - - - - - - CHRD HKD3_k127_1707732_4 234267.Acid_4252 4.086e-81 292.0 COG0613@1|root,COG0613@2|Bacteria,3Y2US@57723|Acidobacteria 57723|Acidobacteria S PHP domain protein - - - - - - - - - - - - - HKD3_k127_1707732_7 55207.KP22_07080 8.78e-39 148.0 COG1917@1|root,COG1917@2|Bacteria,1RJX2@1224|Proteobacteria,1SA64@1236|Gammaproteobacteria,1MSQS@122277|Pectobacterium 1236|Gammaproteobacteria S Cupin domain - - - - - - - - - - - - Cupin_2 HKD3_k127_1707732_9 1191523.MROS_0340 7.355e-28 131.0 COG2151@1|root,COG2151@2|Bacteria 2|Bacteria L metal-sulfur cluster biosynthetic enzyme paaD - - ko:K02612,ko:K03593 ko00360,ko01120,map00360,map01120 - R09838 RC02690 ko00000,ko00001,ko03029,ko03036 - - - FeS_assembly_P HKD3_k127_1707732_2 215803.DB30_6994 3.451e-116 389.0 COG0719@1|root,COG0719@2|Bacteria,1MVK0@1224|Proteobacteria,42QXC@68525|delta/epsilon subdivisions,2WN3M@28221|Deltaproteobacteria,2YY27@29|Myxococcales 28221|Deltaproteobacteria O Uncharacterized protein family (UPF0051) sufD - - ko:K09015 - - - - ko00000 - - - UPF0051 HKD3_k127_1707732_5 765913.ThidrDRAFT_1999 2.074e-59 207.0 COG0396@1|root,COG0396@2|Bacteria,1MUGK@1224|Proteobacteria,1RPFE@1236|Gammaproteobacteria,1WWC1@135613|Chromatiales 135613|Chromatiales O TIGRFAM FeS assembly ATPase SufC - - - ko:K09013 - - - - ko00000,ko02000 - - - ABC_tran HKD3_k127_1756789_10 452662.SJA_C1-18900 6.064e-47 184.0 COG4206@1|root,COG4206@2|Bacteria,1MUZG@1224|Proteobacteria,2TUNP@28211|Alphaproteobacteria,2K1AW@204457|Sphingomonadales 204457|Sphingomonadales H receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - Plug,TonB_dep_Rec HKD3_k127_1756789_2 1121124.JNIX01000010_gene788 4.375e-135 450.0 COG2355@1|root,COG2355@2|Bacteria,1MWEW@1224|Proteobacteria,2TR5C@28211|Alphaproteobacteria,2KI2D@204458|Caulobacterales 204458|Caulobacterales E PFAM peptidase M19 renal dipeptidase - - 3.4.13.19 ko:K01273 - - - - ko00000,ko00537,ko01000,ko01002,ko04147 - - - Peptidase_M19 HKD3_k127_1756789_15 997346.HMPREF9374_2893 1.709e-19 96.0 COG1765@1|root,COG1765@2|Bacteria,1V7SN@1239|Firmicutes,4HJHJ@91061|Bacilli,27BV2@186824|Thermoactinomycetaceae 91061|Bacilli O OsmC-like protein - - - ko:K07397 - - - - ko00000 - - - OsmC HKD3_k127_1756789_11 234267.Acid_6506 1.327e-41 172.0 COG3503@1|root,COG3503@2|Bacteria,3Y73K@57723|Acidobacteria 57723|Acidobacteria S Protein of unknown function (DUF1624) - - - - - - - - - - - - DUF1624 HKD3_k127_1756789_3 269799.Gmet_1092 6.073e-123 401.0 COG2326@1|root,COG2326@2|Bacteria,1MVE2@1224|Proteobacteria,42S6H@68525|delta/epsilon subdivisions,2WNDC@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Polyphosphate kinase 2 (PPK2) - - - - - - - - - - - - PPK2 HKD3_k127_1756789_17 63737.Npun_F4488 8.69e-17 93.0 2A5JH@1|root,30U9U@2|Bacteria,1GK5Q@1117|Cyanobacteria,1HTB6@1161|Nostocales 1117|Cyanobacteria S DNA-sulfur modification-associated - - - - - - - - - - - - DndB HKD3_k127_1756789_9 756499.Desde_0505 1.147e-60 235.0 COG5373@1|root,COG5373@2|Bacteria,1UUGX@1239|Firmicutes,24EBQ@186801|Clostridia,26413@186807|Peptococcaceae 186801|Clostridia S Predicted membrane protein (DUF2339) - - - - - - - - - - - - DUF2339 HKD3_k127_1756789_1 861299.J421_5972 5.159e-136 445.0 2BS4J@1|root,32M5G@2|Bacteria,1ZUJX@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HKD3_k127_1756789_5 401526.TcarDRAFT_1038 2.699e-101 354.0 COG1364@1|root,COG1364@2|Bacteria,1TPBP@1239|Firmicutes,4H2TK@909932|Negativicutes 909932|Negativicutes E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate argJ - 2.3.1.1,2.3.1.35 ko:K00620 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028 R00259,R02282 RC00004,RC00064 ko00000,ko00001,ko00002,ko01000 - - - ArgJ HKD3_k127_1756789_16 1267534.KB906756_gene48 1.274e-18 98.0 COG1246@1|root,COG1246@2|Bacteria,3Y3WV@57723|Acidobacteria,2JISF@204432|Acidobacteriia 204432|Acidobacteriia E Acetyltransferase (GNAT) family - - 2.3.1.1 ko:K00619 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028 R00259 RC00004,RC00064 ko00000,ko00001,ko00002,ko01000 - - - Acetyltransf_1 HKD3_k127_1756789_6 292459.STH2881 2.084e-98 340.0 COG4992@1|root,COG4992@2|Bacteria,1TP9S@1239|Firmicutes,248C9@186801|Clostridia 186801|Clostridia E PFAM Aminotransferase class-III argD - 2.6.1.11,2.6.1.17 ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00028,M00845 R02283,R04475 RC00006,RC00062 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_3 HKD3_k127_1756789_12 1112214.AHIS01000046_gene2291 2.442e-39 159.0 COG0548@1|root,COG0548@2|Bacteria,1MU17@1224|Proteobacteria,2TQQS@28211|Alphaproteobacteria,2K107@204457|Sphingomonadales 204457|Sphingomonadales E Belongs to the acetylglutamate kinase family. ArgB subfamily argB - 2.7.2.8 ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028 R02649 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase HKD3_k127_1756789_8 1410665.JNKR01000007_gene652 1.724e-70 250.0 COG0002@1|root,COG0002@2|Bacteria,1TPVI@1239|Firmicutes,4H314@909932|Negativicutes 909932|Negativicutes E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde argC - 1.2.1.38 ko:K00145 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028,M00845 R03443 RC00684 ko00000,ko00001,ko00002,ko01000 - - - Semialdhyde_dh,Semialdhyde_dhC HKD3_k127_1756789_13 562970.Btus_0743 1.892e-24 111.0 COG1438@1|root,COG1438@2|Bacteria,1V1R7@1239|Firmicutes,4HFY8@91061|Bacilli,278CQ@186823|Alicyclobacillaceae 91061|Bacilli K Regulates arginine biosynthesis genes argR GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006355,GO:0006520,GO:0006525,GO:0006807,GO:0008150,GO:0008152,GO:0009064,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0019752,GO:0031323,GO:0031326,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:1901564,GO:1901605,GO:1903506,GO:2000112,GO:2001141 - ko:K03402 - - - - ko00000,ko03000 - - - Arg_repressor,Arg_repressor_C HKD3_k127_1756789_0 644966.Tmar_0539 6.428e-145 473.0 COG0137@1|root,COG0137@2|Bacteria,1TP3X@1239|Firmicutes,247MF@186801|Clostridia,3WCR7@538999|Clostridiales incertae sedis 186801|Clostridia H Belongs to the argininosuccinate synthase family. Type 1 subfamily argG - 6.3.4.5 ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 M00029,M00844,M00845 R01954 RC00380,RC00629 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Arginosuc_synth HKD3_k127_1756789_4 264732.Moth_2284 3.881e-108 382.0 COG0165@1|root,COG0165@2|Bacteria,1TNZ6@1239|Firmicutes,2489H@186801|Clostridia,42F08@68295|Thermoanaerobacterales 186801|Clostridia E TIGRFAM argininosuccinate lyase argH - 4.3.2.1 ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 M00029,M00844,M00845 R01086 RC00445,RC00447 ko00000,ko00001,ko00002,ko01000,ko04147 - - - ASL_C2,Lyase_1 HKD3_k127_1756789_18 1267535.KB906767_gene110 1.13e-07 63.0 2DF3Q@1|root,2ZQCR@2|Bacteria,3Y8YJ@57723|Acidobacteria 57723|Acidobacteria - - - - - - - - - - - - - - - HKD3_k127_1756789_7 1382306.JNIM01000001_gene4148 3.491e-80 282.0 COG0623@1|root,COG0623@2|Bacteria,2G6ED@200795|Chloroflexi 200795|Chloroflexi I Enoyl- acyl-carrier-protein reductase NADH fabI - 1.3.1.10,1.3.1.9 ko:K00208 ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212 M00083,M00572 R01404,R04429,R04430,R04724,R04725,R04955,R04956,R04958,R04959,R04961,R04962,R04966,R04967,R04969,R04970,R07765,R10118,R10122,R11671 RC00052,RC00076,RC00120 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short_C2 HKD3_k127_1756789_14 219305.MCAG_05393 1.132e-21 106.0 COG1018@1|root,COG1018@2|Bacteria,2HU15@201174|Actinobacteria,4DA7T@85008|Micromonosporales 201174|Actinobacteria C Oxidoreductase FAD-binding domain - - - - - - - - - - - - FAD_binding_6,NAD_binding_1 HKD3_k127_1756789_19 717605.Theco_0965 3.612e-07 55.0 COG2199@1|root,COG2199@2|Bacteria,1VATI@1239|Firmicutes,4HIV8@91061|Bacilli,26ZBV@186822|Paenibacillaceae 91061|Bacilli T diguanylate cyclase - - - - - - - - - - - - GGDEF HKD3_k127_1758641_1 269799.Gmet_1004 9.748e-16 81.0 COG3058@1|root,COG3058@2|Bacteria,1NK06@1224|Proteobacteria,42VNJ@68525|delta/epsilon subdivisions,2WS9J@28221|Deltaproteobacteria 28221|Deltaproteobacteria O Necessary for formate dehydrogenase activity fdhE - - ko:K02380 - - - - ko00000 - - - FdhE HKD3_k127_1758641_0 1379698.RBG1_1C00001G0886 4.02e-42 170.0 COG1686@1|root,COG1686@2|Bacteria,2NPJT@2323|unclassified Bacteria 2|Bacteria M Belongs to the peptidase S11 family pbpG GO:0000003,GO:0000270,GO:0000910,GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005623,GO:0006022,GO:0006508,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016043,GO:0016787,GO:0019538,GO:0019954,GO:0022402,GO:0022414,GO:0030203,GO:0032505,GO:0042221,GO:0042493,GO:0042597,GO:0043093,GO:0043170,GO:0044238,GO:0044464,GO:0045229,GO:0050896,GO:0051301,GO:0070011,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0140096,GO:1901135,GO:1901564 3.4.16.4 ko:K01286,ko:K07258,ko:K07262 ko00550,ko01100,map00550,map01100 - - - ko00000,ko00001,ko01000,ko01002,ko01011 - - iECO103_1326.ECO103_2610,iYL1228.KPN_02573 Peptidase_S11 HKD3_k127_1758641_2 891968.Anamo_1495 3.226e-09 62.0 COG0695@1|root,COG0695@2|Bacteria,3TBJF@508458|Synergistetes 508458|Synergistetes O TIGRFAM Glutaredoxin-like protein, YruB-family - - - - - - - - - - - - Glutaredoxin HKD3_k127_1775586_6 639282.DEFDS_0760 4.1e-30 138.0 COG3303@1|root,COG3303@2|Bacteria,2GG7G@200930|Deferribacteres 200930|Deferribacteres C Doubled CXXCH motif (Paired_CXXCH_1) - - - - - - - - - - - - Paired_CXXCH_1 HKD3_k127_1775586_4 243231.GSU3225 2.679e-63 229.0 COG3391@1|root,COG3391@2|Bacteria,1MYI5@1224|Proteobacteria,43AJ0@68525|delta/epsilon subdivisions,2X5Z8@28221|Deltaproteobacteria 28221|Deltaproteobacteria S PFAM NHL repeat containing protein - - - - - - - - - - - - - HKD3_k127_1775586_7 338966.Ppro_1416 4.729e-29 130.0 COG0760@1|root,COG0760@2|Bacteria,1MZDK@1224|Proteobacteria,42RVN@68525|delta/epsilon subdivisions,2WNJW@28221|Deltaproteobacteria,43SP4@69541|Desulfuromonadales 28221|Deltaproteobacteria M SurA N-terminal domain - - 5.2.1.8 ko:K03769 - - - - ko00000,ko01000,ko03110 - - - Rotamase,Rotamase_2,Rotamase_3,SurA_N_3 HKD3_k127_1775586_8 123214.PERMA_1455 6.534e-29 129.0 COG3303@1|root,COG3303@2|Bacteria 2|Bacteria C Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - - - - - - - - - - Paired_CXXCH_1 HKD3_k127_1775586_2 123214.PERMA_1454 3.727e-90 309.0 COG3391@1|root,COG3391@2|Bacteria 2|Bacteria CO amine dehydrogenase activity - - - - - - - - - - - - NHL,TPR_11 HKD3_k127_1775586_1 204669.Acid345_0472 1.651e-97 341.0 COG0484@1|root,COG0484@2|Bacteria 2|Bacteria O heat shock protein binding - - - - - - - - - - - - Cytochrom_CIII,Cytochrom_c3_2,Cytochrome_C7 HKD3_k127_1775586_9 138119.DSY3099 3.493e-17 92.0 COG2864@1|root,COG2864@2|Bacteria,1V757@1239|Firmicutes,24FMN@186801|Clostridia,260X4@186807|Peptococcaceae 186801|Clostridia C formate dehydrogenase - - - ko:K00127 ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200 - R00519 RC02796 ko00000,ko00001 - - - Ni_hydr_CYTB HKD3_k127_1775586_5 1125863.JAFN01000001_gene3040 3.472e-45 174.0 COG0615@1|root,COG0615@2|Bacteria,1REW3@1224|Proteobacteria,42SGQ@68525|delta/epsilon subdivisions,2WPTP@28221|Deltaproteobacteria 28221|Deltaproteobacteria H Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose rfaE - - - - - - - - - - - CTP_transf_like HKD3_k127_1775586_0 1047013.AQSP01000132_gene1707 1.677e-137 451.0 COG1134@1|root,COG1134@2|Bacteria,2NP4S@2323|unclassified Bacteria 2|Bacteria GM ATPases associated with a variety of cellular activities rfbB - 3.6.3.38,3.6.3.40 ko:K01990,ko:K09689,ko:K09691,ko:K09693 ko02010,map02010 M00249,M00250,M00251,M00254 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.101,3.A.1.103,3.A.1.104 - - ABC_tran,Wzt_C HKD3_k127_1775586_3 1047013.AQSP01000132_gene1706 1.596e-78 269.0 COG1682@1|root,COG1682@2|Bacteria,2NQ2H@2323|unclassified Bacteria 2|Bacteria U ABC-2 type transporter - - - ko:K09690 ko02010,map02010 M00250 - - ko00000,ko00001,ko00002,ko02000 3.A.1.103 - - ABC2_membrane HKD3_k127_1783886_1 479432.Sros_2015 1.053e-09 61.0 COG2402@1|root,COG2402@2|Bacteria,2IRQ5@201174|Actinobacteria,4EP3S@85012|Streptosporangiales 201174|Actinobacteria S PIN domain - - - ko:K07065 - - - - ko00000 - - - PIN HKD3_k127_1783886_0 1121920.AUAU01000006_gene306 1.105e-232 739.0 COG1506@1|root,COG1506@2|Bacteria,3Y2HK@57723|Acidobacteria 57723|Acidobacteria E Dienelactone hydrolase family - - - - - - - - - - - - Peptidase_S9 HKD3_k127_179379_3 1247963.JPHU01000025_gene1553 2.73e-19 95.0 COG4319@1|root,COG4319@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - DUF4440,SnoaL_3 HKD3_k127_179379_2 1121920.AUAU01000009_gene1944 2.247e-25 111.0 COG1832@1|root,COG1832@2|Bacteria,3Y5TA@57723|Acidobacteria 57723|Acidobacteria S CoA binding domain - - - - - - - - - - - - CoA_binding_2 HKD3_k127_179379_0 926550.CLDAP_20900 3.229e-101 338.0 COG1012@1|root,COG1012@2|Bacteria,2G61H@200795|Chloroflexi 200795|Chloroflexi C Belongs to the aldehyde dehydrogenase family - - 1.2.1.88 ko:K00294 ko00250,ko00330,ko01100,map00250,map00330,map01100 - R00245,R00707,R00708,R04444,R04445,R05051 RC00080,RC00216,RC00242,RC00255 ko00000,ko00001,ko01000 - - - Aldedh HKD3_k127_1810230_1 243231.GSU3113 1.525e-56 204.0 COG0595@1|root,COG0595@2|Bacteria,1MUGV@1224|Proteobacteria,42M65@68525|delta/epsilon subdivisions,2WIQ9@28221|Deltaproteobacteria,43U97@69541|Desulfuromonadales 28221|Deltaproteobacteria J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay rnj - - ko:K12574 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - Lactamase_B,Lactamase_B_2,RMMBL HKD3_k127_1810230_0 1382359.JIAL01000001_gene136 2.411e-108 370.0 COG1674@1|root,COG1674@2|Bacteria,3Y3CJ@57723|Acidobacteria,2JHRN@204432|Acidobacteriia 204432|Acidobacteriia D Ftsk_gamma - - - ko:K03466 - - - - ko00000,ko03036 3.A.12 - - FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma HKD3_k127_1823948_0 667014.Thein_1717 1.562e-132 433.0 COG0258@1|root,COG0749@1|root,COG0258@2|Bacteria,COG0749@2|Bacteria,2GHDG@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity polA - 2.7.7.7 ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 - R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko01000,ko03032,ko03400 - - - 5_3_exonuc,5_3_exonuc_N,DNA_pol_A,DNA_pol_A_exo1 HKD3_k127_1823948_3 1146883.BLASA_4247 4.801e-13 72.0 2DTXW@1|root,33N54@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_1823948_2 870187.Thini_0338 3.712e-34 139.0 COG1848@1|root,COG1848@2|Bacteria,1MZR2@1224|Proteobacteria,1S97Y@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Toxic component of a toxin-antitoxin (TA) module. An RNase - - - ko:K07064 - - - - ko00000 - - - PIN HKD3_k127_1823948_1 338963.Pcar_3101 1.499e-76 280.0 COG0617@1|root,COG0617@2|Bacteria,1MVCS@1224|Proteobacteria,42QKZ@68525|delta/epsilon subdivisions,2WJ74@28221|Deltaproteobacteria,43RXY@69541|Desulfuromonadales 28221|Deltaproteobacteria J Probable RNA and SrmB- binding site of polymerase A pcnB - 2.7.7.19,2.7.7.72 ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 - R09382,R09383,R09384,R09386 RC00078 ko00000,ko00001,ko01000,ko03016,ko03019 - - - PolyA_pol,PolyA_pol_RNAbd,PolyA_pol_arg_C HKD3_k127_1823948_4 235909.GK0796 5.753e-07 52.0 COG0078@1|root,COG0078@2|Bacteria,1TPF2@1239|Firmicutes,4H9X8@91061|Bacilli,1WFZ9@129337|Geobacillus 91061|Bacilli E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline argF GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 ko:K00611 ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230 M00029,M00844 R01398 RC00096 ko00000,ko00001,ko00002,ko01000 - - - OTCace,OTCace_N HKD3_k127_182544_1 1047013.AQSP01000140_gene2461 3.119e-114 379.0 COG0438@1|root,COG0438@2|Bacteria,2NQED@2323|unclassified Bacteria 2|Bacteria M Glycosyl transferases group 1 - - - - - - - - - - - - Glyco_trans_1_4,Glycos_transf_1 HKD3_k127_182544_2 1499967.BAYZ01000193_gene3921 2.096e-90 307.0 COG0382@1|root,COG0382@2|Bacteria,2NNVJ@2323|unclassified Bacteria 2|Bacteria H UbiA prenyltransferase family ubiA - - - - - - - - - - - UbiA HKD3_k127_182544_7 401053.AciPR4_2577 2.254e-34 134.0 COG1366@1|root,COG1366@2|Bacteria,3Y4U6@57723|Acidobacteria,2JJH2@204432|Acidobacteriia 204432|Acidobacteriia T Belongs to the anti-sigma-factor antagonist family - - - ko:K04749 - - - - ko00000,ko03021 - - - STAS HKD3_k127_182544_6 204669.Acid345_1209 4.988e-37 144.0 2DIW1@1|root,32UBV@2|Bacteria,3Y5BC@57723|Acidobacteria,2JJSS@204432|Acidobacteriia 204432|Acidobacteriia S Probable zinc-ribbon domain - - - - - - - - - - - - zf-trcl HKD3_k127_182544_8 234267.Acid_4371 3.646e-19 102.0 COG0828@1|root,COG0828@2|Bacteria,3Y5J9@57723|Acidobacteria 57723|Acidobacteria J Belongs to the bacterial ribosomal protein bS21 family rpsU - - ko:K02970 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S21 HKD3_k127_182544_0 667014.Thein_1214 6.479e-121 403.0 COG0151@1|root,COG0151@2|Bacteria,2GGTX@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria F Belongs to the GARS family purD - 6.3.4.13 ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04144 RC00090,RC00166 ko00000,ko00001,ko00002,ko01000 - - - AIRC,GARS_A,GARS_C,GARS_N HKD3_k127_182544_5 96561.Dole_1427 1.408e-52 190.0 COG0041@1|root,COG0151@1|root,COG0041@2|Bacteria,COG0151@2|Bacteria,1MUAH@1224|Proteobacteria,42MCI@68525|delta/epsilon subdivisions,2WJ7H@28221|Deltaproteobacteria,2MIPF@213118|Desulfobacterales 28221|Deltaproteobacteria F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) purD - 6.3.4.13 ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04144 RC00090,RC00166 ko00000,ko00001,ko00002,ko01000 - - - AIRC,GARS_A,GARS_C,GARS_N HKD3_k127_182544_3 243231.GSU2568 3.798e-79 279.0 COG0621@1|root,COG0621@2|Bacteria,1MUCS@1224|Proteobacteria,42MN1@68525|delta/epsilon subdivisions,2WJ1H@28221|Deltaproteobacteria,43TX0@69541|Desulfuromonadales 28221|Deltaproteobacteria J SMART Elongator protein 3 MiaB NifB mtaB - 2.8.4.5 ko:K18707 - - R10649 RC00003,RC03221 ko00000,ko01000,ko03016 - - - Radical_SAM,UPF0004 HKD3_k127_182544_4 479434.Sthe_1821 4.375e-59 210.0 COG0820@1|root,COG0820@2|Bacteria,2G5SD@200795|Chloroflexi,27XRH@189775|Thermomicrobia 189775|Thermomicrobia J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs rlmN - 2.1.1.192 ko:K06941 - - - - ko00000,ko01000,ko03009 - - - Radical_SAM HKD3_k127_1830199_2 395494.Galf_2325 8.835e-63 224.0 COG1943@1|root,COG1943@2|Bacteria,1P19I@1224|Proteobacteria,2VKZ3@28216|Betaproteobacteria,44WHN@713636|Nitrosomonadales 28216|Betaproteobacteria L Transposase IS200 like - - - ko:K07491 - - - - ko00000 - - - Y1_Tnp HKD3_k127_1830199_4 794903.OPIT5_01705 2.637e-13 78.0 2DMI2@1|root,32RP8@2|Bacteria,46Y4T@74201|Verrucomicrobia,3K8XN@414999|Opitutae 414999|Opitutae - - - - - - - - - - - - - - - HKD3_k127_1830199_3 1242864.D187_006808 5.135e-41 174.0 COG0730@1|root,COG0730@2|Bacteria,1NJ47@1224|Proteobacteria,42P2D@68525|delta/epsilon subdivisions,2WKSQ@28221|Deltaproteobacteria 28221|Deltaproteobacteria S membrane transporter protein - - - ko:K07090 - - - - ko00000 - - - TauE HKD3_k127_1830199_1 1379698.RBG1_1C00001G1345 6.567e-95 328.0 COG2203@1|root,COG2208@1|root,COG2203@2|Bacteria,COG2208@2|Bacteria,2NQ3V@2323|unclassified Bacteria 2|Bacteria KT COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit rsbU - 3.1.3.3,4.6.1.1 ko:K01768,ko:K07315 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000,ko03021 - - - GAF,GAF_2,HATPase_c_2,SSF,SpoIIE HKD3_k127_1830199_0 861299.J421_0969 2.657e-211 667.0 COG3119@1|root,COG3119@2|Bacteria,1ZUXF@142182|Gemmatimonadetes 142182|Gemmatimonadetes P Domain of unknown function (DUF4976) - - - - - - - - - - - - DUF4976,Sulfatase HKD3_k127_1842219_1 1144275.COCOR_05445 6.687e-121 392.0 COG0379@1|root,COG0379@2|Bacteria,1MWQU@1224|Proteobacteria,42N99@68525|delta/epsilon subdivisions,2WJY8@28221|Deltaproteobacteria,2YTVB@29|Myxococcales 28221|Deltaproteobacteria H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate nadA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 ko:K03517 ko00760,ko01100,map00760,map01100 M00115 R04292 RC01119 ko00000,ko00001,ko00002,ko01000 - - - NadA HKD3_k127_1842219_2 869210.Marky_2090 4.067e-75 273.0 COG0157@1|root,COG0157@2|Bacteria,1WIHZ@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus H Belongs to the NadC ModD family nadC - 2.4.2.19 ko:K00767 ko00760,ko01100,map00760,map01100 M00115 R03348 RC02877 ko00000,ko00001,ko00002,ko01000 - - - QRPTase_C,QRPTase_N HKD3_k127_1842219_0 331113.SNE_A13940 5.072e-161 522.0 COG0029@1|root,COG0029@2|Bacteria,2JGXD@204428|Chlamydiae 204428|Chlamydiae H FAD dependent oxidoreductase - - 1.4.3.16 ko:K00278 ko00250,ko00760,ko01100,map00250,map00760,map01100 M00115 R00357,R00481 RC00006,RC02566 ko00000,ko00001,ko00002,ko01000 - - - FAD_binding_2 HKD3_k127_1842219_3 1117943.SFHH103_02774 1.503e-56 205.0 COG0596@1|root,COG0596@2|Bacteria,1Q47F@1224|Proteobacteria,2U3WB@28211|Alphaproteobacteria 28211|Alphaproteobacteria I hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - - - - - - - - - - Abhydrolase_1,Abhydrolase_6 HKD3_k127_185206_1 1123373.ATXI01000010_gene1014 2.54e-72 246.0 COG0304@1|root,COG0304@2|Bacteria,2GH5C@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP - - 2.3.1.179 ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119 RC00039,RC02728,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Ketoacyl-synt_C,ketoacyl-synt HKD3_k127_185206_0 1267533.KB906734_gene3885 6.202e-85 296.0 COG2086@1|root,COG2086@2|Bacteria,3Y2PD@57723|Acidobacteria,2JK7K@204432|Acidobacteriia 204432|Acidobacteriia C Electron transfer flavoprotein domain - - - ko:K03521 - - - - ko00000 - - - ETF HKD3_k127_185206_2 1267533.KB906734_gene3884 2.898e-69 243.0 COG2025@1|root,COG2025@2|Bacteria,3Y3JE@57723|Acidobacteria,2JM9U@204432|Acidobacteriia 204432|Acidobacteriia C Electron transfer flavoprotein FAD-binding domain - - - ko:K03522 - - - - ko00000,ko04147 - - - ETF,ETF_alpha HKD3_k127_1856254_5 118161.KB235922_gene2360 2.117e-26 114.0 COG1680@1|root,COG1680@2|Bacteria,1G5M7@1117|Cyanobacteria 1117|Cyanobacteria V Beta-lactamase class C - - - - - - - - - - - - Beta-lactamase,DUF3471 HKD3_k127_1856254_3 100226.SCO5898 1.329e-42 164.0 COG3752@1|root,COG3752@2|Bacteria 2|Bacteria M Protein of unknown function (DUF1295) - - - - - - - - - - - - DUF1295 HKD3_k127_1856254_1 649764.HMPREF0762_00028 7.799e-63 223.0 COG1994@1|root,COG1994@2|Bacteria,2GM8E@201174|Actinobacteria,4CUK0@84998|Coriobacteriia 84998|Coriobacteriia S Peptidase M50 - - - - - - - - - - - - Peptidase_M50 HKD3_k127_1856254_9 66874.JOFS01000009_gene2770 2.691e-05 55.0 COG4319@1|root,COG4319@2|Bacteria,2IMG5@201174|Actinobacteria 201174|Actinobacteria S Domain of unknown function (DUF4440) - - - - - - - - - - - - DUF4440 HKD3_k127_1856254_2 1038859.AXAU01000012_gene4234 7.045e-51 185.0 2AKNV@1|root,31BFG@2|Bacteria,1NZ2P@1224|Proteobacteria,2USTH@28211|Alphaproteobacteria 28211|Alphaproteobacteria - - - - - - - - - - - - - - DUF3237 HKD3_k127_1856254_7 68219.JNXI01000007_gene1838 8.662e-10 70.0 COG4319@1|root,COG4319@2|Bacteria,2IMG5@201174|Actinobacteria 201174|Actinobacteria S Domain of unknown function (DUF4440) - - - - - - - - - - - - DUF4440 HKD3_k127_1856254_8 1267534.KB906756_gene153 1.129e-05 57.0 COG4319@1|root,COG4319@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - Beta-lactamase,DUF4440,SnoaL_2,SnoaL_3 HKD3_k127_1856254_10 1120988.AXWV01000052_gene1384 0.0003224 51.0 COG2949@1|root,COG2949@2|Bacteria,1MURW@1224|Proteobacteria,1SY9J@1236|Gammaproteobacteria,1Y6JI@135624|Aeromonadales 135624|Aeromonadales S DUF218 domain - - - - - - - - - - - - DUF218 HKD3_k127_1856254_6 391896.A1I_01920 1.683e-25 113.0 COG2337@1|root,COG2337@2|Bacteria,1MZAV@1224|Proteobacteria,2UD15@28211|Alphaproteobacteria 28211|Alphaproteobacteria T growth inhibitor - - - ko:K07171 - - - - ko00000,ko01000,ko02048 - - - PemK_toxin HKD3_k127_1856254_0 1267535.KB906767_gene447 1.672e-186 613.0 COG0457@1|root,COG0515@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,3Y67Y@57723|Acidobacteria,2JMN2@204432|Acidobacteriia 204432|Acidobacteriia T Tetratricopeptide repeat - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase,TPR_12 HKD3_k127_1856254_4 234267.Acid_3719 4.195e-32 129.0 COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,3Y3BP@57723|Acidobacteria 57723|Acidobacteria M Tricorn protease homolog - - - ko:K08676 - - - - ko00000,ko01000,ko01002 - - - PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ HKD3_k127_1866454_0 509190.Cseg_0910 3.592e-24 117.0 COG5542@1|root,COG5542@2|Bacteria,1R6HY@1224|Proteobacteria,2US5A@28211|Alphaproteobacteria 28211|Alphaproteobacteria S integral membrane protein - - - - - - - - - - - - - HKD3_k127_18806_1 379066.GAU_3550 1.212e-120 402.0 COG0591@1|root,COG0591@2|Bacteria 2|Bacteria E symporter activity - - - ko:K03307 - - - - ko00000 2.A.21 - - SSF HKD3_k127_18806_2 477184.KYC_24392 1.191e-107 370.0 COG3191@1|root,COG3191@2|Bacteria,1MWDP@1224|Proteobacteria,2VHM1@28216|Betaproteobacteria 28216|Betaproteobacteria EQ PFAM peptidase S58, DmpA - - 3.4.11.19 ko:K01266 - - - - ko00000,ko01000,ko01002 - - - Peptidase_S58 HKD3_k127_18806_8 1047013.AQSP01000088_gene1630 9.865e-08 63.0 COG0457@1|root,COG0457@2|Bacteria 1047013.AQSP01000088_gene1630|- S peptidyl-tyrosine sulfation - - - - - - - - - - - - - HKD3_k127_18806_0 661478.OP10G_2583 4.647e-244 782.0 COG1680@1|root,COG3876@1|root,COG1680@2|Bacteria,COG3876@2|Bacteria 2|Bacteria G Protein conserved in bacteria - - - - - - - - - - - - Beta-lactamase,DUF1343,Lipase_GDSL,Lipase_GDSL_2 HKD3_k127_18806_7 876269.ARWA01000001_gene2941 4.534e-09 67.0 COG5640@1|root,COG5640@2|Bacteria,1QVKN@1224|Proteobacteria,2TWHP@28211|Alphaproteobacteria,3NB7H@45404|Beijerinckiaceae 28211|Alphaproteobacteria O Trypsin-like serine protease - - - - - - - - - - - - Trypsin HKD3_k127_18806_6 886293.Sinac_6891 3.137e-34 145.0 COG1999@1|root,COG2322@1|root,COG1999@2|Bacteria,COG2322@2|Bacteria,2IZH2@203682|Planctomycetes 203682|Planctomycetes S SCO1/SenC - - - ko:K07152,ko:K08976 - - - - ko00000,ko03029 - - - DUF420,SCO1-SenC HKD3_k127_18806_4 886293.Sinac_6888 6.94e-79 273.0 COG0109@1|root,COG0109@2|Bacteria,2IYUU@203682|Planctomycetes 203682|Planctomycetes O Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group ctaB GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 ko:K02257 ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714 M00154 R07411 RC01786 ko00000,ko00001,ko00002,ko01000,ko01006,ko03029 - - - UbiA HKD3_k127_18806_3 880072.Desac_0027 1.369e-81 289.0 COG0739@1|root,COG0739@2|Bacteria,1NESH@1224|Proteobacteria,42MGB@68525|delta/epsilon subdivisions,2WJ7F@28221|Deltaproteobacteria 28221|Deltaproteobacteria M PFAM Peptidase M23 - - - - - - - - - - - - Peptidase_M23 HKD3_k127_18806_5 665959.HMPREF1013_03257 3.877e-44 166.0 COG2423@1|root,COG2423@2|Bacteria,1TPHM@1239|Firmicutes,4HCUU@91061|Bacilli,1ZR18@1386|Bacillus 91061|Bacilli E Ornithine cyclodeaminase/mu-crystallin family - - 4.3.1.12 ko:K01750 ko00330,ko01110,ko01130,ko01230,map00330,map01110,map01130,map01230 - R00671 RC00354 ko00000,ko00001,ko01000 - - - OCD_Mu_crystall HKD3_k127_1889098_7 595460.RRSWK_04300 2.635e-08 55.0 COG0187@1|root,COG0187@2|Bacteria,2IWXP@203682|Planctomycetes 203682|Planctomycetes L COG0187 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit - - 5.99.1.3 ko:K02470,ko:K02622 - - - - ko00000,ko01000,ko02048,ko03032,ko03036,ko03400 - - - DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim HKD3_k127_1889098_3 234267.Acid_7883 1.863e-89 314.0 COG1432@1|root,COG1432@2|Bacteria,3Y64C@57723|Acidobacteria 57723|Acidobacteria S NYN domain - - - - - - - - - - - - NYN,OST-HTH HKD3_k127_1889098_4 1254432.SCE1572_43635 1.833e-79 293.0 COG0545@1|root,COG0545@2|Bacteria,1RDA1@1224|Proteobacteria,42QU4@68525|delta/epsilon subdivisions,2WMRQ@28221|Deltaproteobacteria,2YVWV@29|Myxococcales 28221|Deltaproteobacteria O FKBP-type peptidyl-prolyl cis-trans isomerase - - 5.2.1.8 ko:K01802,ko:K03772 - - - - ko00000,ko01000,ko03110 - - - FKBP_C,FKBP_N HKD3_k127_1889098_0 383372.Rcas_1875 2.556e-288 904.0 COG0205@1|root,COG0205@2|Bacteria,2G62R@200795|Chloroflexi,375FT@32061|Chloroflexia 32061|Chloroflexia H Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis - - 2.7.1.11 ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 M00001,M00345 R00756,R03236,R03237,R03238,R03239,R04779 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 - - - PFK HKD3_k127_1889098_6 338966.Ppro_0043 5.034e-10 71.0 COG2755@1|root,COG2755@2|Bacteria,1RHDZ@1224|Proteobacteria,42SMX@68525|delta/epsilon subdivisions,2X62A@28221|Deltaproteobacteria 28221|Deltaproteobacteria E GDSL-like Lipase/Acylhydrolase - - - - - - - - - - - - Lipase_GDSL_2 HKD3_k127_1889098_1 1499967.BAYZ01000080_gene919 1.315e-233 741.0 COG3533@1|root,COG3533@2|Bacteria,2NNW0@2323|unclassified Bacteria 2|Bacteria S Beta-L-arabinofuranosidase, GH127 - - - - - - - - - - - - Glyco_hydro_127 HKD3_k127_1889098_2 1185766.DL1_15655 3.816e-97 332.0 COG0673@1|root,COG0673@2|Bacteria,1MVVF@1224|Proteobacteria,2TR6B@28211|Alphaproteobacteria,2XPA7@285107|Thioclava 28211|Alphaproteobacteria S Oxidoreductase family, C-terminal alpha/beta domain - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C HKD3_k127_1889098_5 1123508.JH636441_gene3665 1.335e-69 241.0 COG0842@1|root,COG0842@2|Bacteria,2IY6D@203682|Planctomycetes 203682|Planctomycetes V ABC-2 type transporter - - - - - - - - - - - - ABC2_membrane HKD3_k127_1902034_5 1168034.FH5T_21220 1.835e-57 205.0 COG0667@1|root,COG0667@2|Bacteria,4NP8D@976|Bacteroidetes,2FTGW@200643|Bacteroidia 976|Bacteroidetes C Aldo/keto reductase family - - - - - - - - - - - - Aldo_ket_red HKD3_k127_1902034_0 861299.J421_5594 3.904e-168 538.0 COG2271@1|root,COG2271@2|Bacteria 2|Bacteria G transmembrane transporter activity - - - - - - - - - - - - MFS_1 HKD3_k127_1902034_4 234267.Acid_5572 4.284e-87 300.0 COG1820@1|root,COG1820@2|Bacteria,3Y3NQ@57723|Acidobacteria 57723|Acidobacteria G Belongs to the metallo-dependent hydrolases superfamily. NagA family - - 3.5.1.25 ko:K01443 ko00520,ko01130,map00520,map01130 - R02059 RC00166,RC00300 ko00000,ko00001,ko01000 - - - Amidohydro_1 HKD3_k127_1902034_1 1121875.KB907547_gene3133 5.626e-161 513.0 COG2355@1|root,COG2355@2|Bacteria,4NDYZ@976|Bacteroidetes,1HZ07@117743|Flavobacteriia 976|Bacteroidetes E peptidase M19 - - 3.4.13.19 ko:K01273 - - - - ko00000,ko00537,ko01000,ko01002,ko04147 - - - Peptidase_M19 HKD3_k127_1902034_3 616991.JPOO01000003_gene1973 4.62e-113 377.0 COG3616@1|root,COG3616@2|Bacteria,4NF5K@976|Bacteroidetes,1HZBK@117743|Flavobacteriia,23FZC@178469|Arenibacter 976|Bacteroidetes E Putative serine dehydratase domain - - - - - - - - - - - - Ala_racemase_N,D-ser_dehydrat HKD3_k127_1902034_2 313603.FB2170_08009 2.861e-125 408.0 COG2610@1|root,COG2610@2|Bacteria,4NFBD@976|Bacteroidetes,1HY9I@117743|Flavobacteriia,2PGJX@252356|Maribacter 976|Bacteroidetes EG GntP family permease gntT - - ko:K06155 - - - - ko00000,ko02000 2.A.8.1.4 - - GntP_permease HKD3_k127_1904577_6 1047013.AQSP01000142_gene207 2.446e-144 466.0 COG0591@1|root,COG0591@2|Bacteria 2|Bacteria E symporter activity - - - ko:K03307 - - - - ko00000 2.A.21 - - SSF HKD3_k127_1904577_10 1047013.AQSP01000142_gene204 9.291e-109 378.0 COG1082@1|root,COG1082@2|Bacteria 2|Bacteria G myo-inosose-2 dehydratase activity - - - - - - - - - - - - AP_endonuc_2 HKD3_k127_1904577_8 1047013.AQSP01000092_gene316 2.664e-135 459.0 COG1902@1|root,COG1902@2|Bacteria 2|Bacteria C pentaerythritol trinitrate reductase activity - - - - - - - - - - - - F420H2_quin_red,Oxidored_FMN HKD3_k127_1904577_3 1047013.AQSP01000126_gene2747 3.865e-206 685.0 COG1053@1|root,COG1053@2|Bacteria,2NQEG@2323|unclassified Bacteria 2|Bacteria C FAD binding domain - - 1.4.3.16,1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 ko:K00278,ko:K03388 ko00250,ko00680,ko00760,ko01100,ko01120,ko01200,map00250,map00680,map00760,map01100,map01120,map01200 M00115,M00356,M00357,M00563,M00567 R00357,R00481,R04540,R11928,R11931,R11943,R11944 RC00006,RC00011,RC02566 ko00000,ko00001,ko00002,ko01000 - - - FAD_binding_2 HKD3_k127_1904577_15 1047013.AQSP01000126_gene2736 2.805e-70 246.0 COG1028@1|root,COG1028@2|Bacteria,2NQUH@2323|unclassified Bacteria 2|Bacteria IQ Enoyl-(Acyl carrier protein) reductase - - - - - - - - - - - - adh_short_C2 HKD3_k127_1904577_19 391600.ABRU01000028_gene983 4.663e-07 63.0 COG3387@1|root,COG3387@2|Bacteria,1MW9J@1224|Proteobacteria,2TWPA@28211|Alphaproteobacteria,2KIA9@204458|Caulobacterales 204458|Caulobacterales G PFAM coagulation factor 5 8 type domain protein - - - - - - - - - - - - CBM_11,F5_F8_type_C HKD3_k127_1904577_1 1047013.AQSP01000126_gene2734 1.599e-268 875.0 COG0383@1|root,COG0383@2|Bacteria,2NQ98@2323|unclassified Bacteria 2|Bacteria G Alpha mannosidase, middle domain - - 3.2.1.24 ko:K01191 ko00511,map00511 - - - ko00000,ko00001,ko01000,ko04131 - GH38 - Alpha-mann_mid,Glyco_hydro_38,Glyco_hydro_38C HKD3_k127_1904577_12 1047013.AQSP01000126_gene2733 6.053e-97 340.0 COG0673@1|root,COG0673@2|Bacteria 2|Bacteria S inositol 2-dehydrogenase activity - - - - - - - - - - - - GFO_IDH_MocA,PmoA HKD3_k127_1904577_9 1047013.AQSP01000126_gene2732 1.617e-127 419.0 COG0407@1|root,COG0407@2|Bacteria,2NPXG@2323|unclassified Bacteria 2|Bacteria H Uroporphyrinogen decarboxylase (URO-D) - - 4.1.1.37 ko:K01599 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R03197,R04972 RC00872 ko00000,ko00001,ko00002,ko01000 - - - URO-D HKD3_k127_1904577_0 1047013.AQSP01000106_gene1756 0.0 1045.0 2DBZP@1|root,2ZC2R@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_1904577_2 1047013.AQSP01000142_gene205 1.17e-219 692.0 COG3408@1|root,COG3408@2|Bacteria 2|Bacteria G Glycogen debranching enzyme - - - - - - - - - - - - Bac_rhamnosid6H,Bac_rhamnosid_C,Big_4,CBM_6,Crystall,Glyco_hydro_64,RicinB_lectin_2,SLH,Trehalase HKD3_k127_1904577_4 1047013.AQSP01000126_gene2729 1.857e-194 632.0 28MYJ@1|root,2ZB5F@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_1904577_7 1047013.AQSP01000130_gene1868 4.03e-141 460.0 COG0407@1|root,COG0407@2|Bacteria,2NQRU@2323|unclassified Bacteria 2|Bacteria H Uroporphyrinogen decarboxylase (URO-D) - - - - - - - - - - - - URO-D HKD3_k127_1904577_5 794903.OPIT5_27515 2.249e-167 541.0 COG1070@1|root,COG1070@2|Bacteria,46SI1@74201|Verrucomicrobia,3K7BT@414999|Opitutae 414999|Opitutae G FGGY family of carbohydrate kinases, C-terminal domain - - 2.7.1.17 ko:K00854 ko00040,ko01100,map00040,map01100 M00014 R01639 RC00002,RC00538 ko00000,ko00001,ko00002,ko01000 - - - FGGY_C,FGGY_N HKD3_k127_1904577_16 1089548.KI783301_gene317 5.307e-65 233.0 COG0506@1|root,COG0506@2|Bacteria,1TQV3@1239|Firmicutes,4HAC1@91061|Bacilli,3WF61@539002|Bacillales incertae sedis 91061|Bacilli E Proline dehydrogenase fadM GO:0000166,GO:0003674,GO:0003824,GO:0004657,GO:0005488,GO:0006082,GO:0006520,GO:0006560,GO:0006562,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016491,GO:0016645,GO:0019752,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0046483,GO:0046700,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 - ko:K00318 ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130 - R10507 RC00083 ko00000,ko00001,ko01000 - - - Pro_dh HKD3_k127_1904577_17 234267.Acid_0852 4.097e-46 176.0 COG2834@1|root,COG2834@2|Bacteria 2|Bacteria M Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - - - - - - - - - - DUF4292 HKD3_k127_1904577_11 234267.Acid_0851 3.861e-103 352.0 COG0793@1|root,COG0793@2|Bacteria 2|Bacteria M Belongs to the peptidase S41A family - - 3.4.21.102 ko:K03797 - - - - ko00000,ko01000,ko01002 - - - Peptidase_S41,Tricorn_C1 HKD3_k127_1904577_14 1347392.CCEZ01000019_gene1018 1.257e-75 273.0 COG1131@1|root,COG1131@2|Bacteria,1TPZR@1239|Firmicutes,247NW@186801|Clostridia,36E9X@31979|Clostridiaceae 186801|Clostridia V ABC transporter - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_1904577_13 635013.TherJR_2703 7.38e-88 304.0 COG1131@1|root,COG1131@2|Bacteria,1TPZR@1239|Firmicutes,247NW@186801|Clostridia,2613B@186807|Peptococcaceae 186801|Clostridia V ABC-type multidrug transport system ATPase - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_1904577_18 865861.AZSU01000006_gene1421 1.591e-44 164.0 COG1725@1|root,COG1725@2|Bacteria,1V9ZC@1239|Firmicutes,24NTW@186801|Clostridia,36JPA@31979|Clostridiaceae 186801|Clostridia K Transcriptional regulator - - - ko:K07979 - - - - ko00000,ko03000 - - - GntR HKD3_k127_1918516_0 1337936.IJ00_01670 1.194e-109 370.0 COG1680@1|root,COG1680@2|Bacteria,1G5Z2@1117|Cyanobacteria,1HIVF@1161|Nostocales 1117|Cyanobacteria V Beta-lactamase - - - - - - - - - - - - Beta-lactamase HKD3_k127_1918516_1 211165.AJLN01000040_gene6459 0.0008007 44.0 COG1680@1|root,COG1680@2|Bacteria,1G5Z2@1117|Cyanobacteria,1JK0D@1189|Stigonemataceae 1117|Cyanobacteria V Beta-lactamase - - - - - - - - - - - - Beta-lactamase HKD3_k127_194657_1 204669.Acid345_0618 8.406e-40 157.0 COG0577@1|root,COG0577@2|Bacteria,3Y6E4@57723|Acidobacteria,2JM2S@204432|Acidobacteriia 204432|Acidobacteriia V MacB-like periplasmic core domain - - - - - - - - - - - - FtsX,MacB_PCD HKD3_k127_194657_0 236097.ADG881_1819 5.952e-90 308.0 COG0604@1|root,COG0604@2|Bacteria,1QY04@1224|Proteobacteria,1RSP0@1236|Gammaproteobacteria,1XR3H@135619|Oceanospirillales 135619|Oceanospirillales C COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - - - - - - - - - - ADH_N,ADH_zinc_N,ADH_zinc_N_2 HKD3_k127_19571_0 317936.Nos7107_1094 4.858e-201 642.0 COG0841@1|root,COG0841@2|Bacteria,1G0C2@1117|Cyanobacteria 1117|Cyanobacteria V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran HKD3_k127_19571_2 1232410.KI421418_gene2159 6.121e-06 57.0 COG3031@1|root,COG3031@2|Bacteria,1PUWN@1224|Proteobacteria,42T73@68525|delta/epsilon subdivisions,2WR4E@28221|Deltaproteobacteria,43UXS@69541|Desulfuromonadales 28221|Deltaproteobacteria U Type II secretion system protein C - - - ko:K02452 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - T2SSC HKD3_k127_19571_1 945713.IALB_3148 3.24e-21 94.0 2CESB@1|root,2Z8UZ@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - DUF481 HKD3_k127_19667_2 742823.HMPREF9465_00737 1.931e-67 231.0 COG0049@1|root,COG0049@2|Bacteria,1MXC8@1224|Proteobacteria,2VQ63@28216|Betaproteobacteria,4PQCE@995019|Sutterellaceae 28216|Betaproteobacteria J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA rpsG - - ko:K02992 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S7 HKD3_k127_19667_1 742823.HMPREF9465_00736 4.103e-69 235.0 COG0048@1|root,COG0048@2|Bacteria,1RCWY@1224|Proteobacteria,2VR2H@28216|Betaproteobacteria,4PQZ4@995019|Sutterellaceae 28216|Betaproteobacteria J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit rpsL - - ko:K02950 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosom_S12_S23 HKD3_k127_19667_0 292.DM42_1480 2.129e-94 312.0 COG0086@1|root,COG0086@2|Bacteria,1MU3M@1224|Proteobacteria,2VIF3@28216|Betaproteobacteria,1K0RX@119060|Burkholderiaceae 28216|Betaproteobacteria K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates rpoC - 2.7.7.6 ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 - - - RNA_pol_Rpb1_1,RNA_pol_Rpb1_2,RNA_pol_Rpb1_3,RNA_pol_Rpb1_4,RNA_pol_Rpb1_5 HKD3_k127_1974490_3 234267.Acid_1372 1.325e-33 139.0 COG0247@1|root,COG0247@2|Bacteria,3Y3K8@57723|Acidobacteria 57723|Acidobacteria C 4Fe-4S dicluster domain - - - - - - - - - - - - CCG,Fer4_8 HKD3_k127_1974490_1 204669.Acid345_3700 8.857e-93 334.0 COG2025@1|root,COG2025@2|Bacteria,3Y4SJ@57723|Acidobacteria,2JP3Y@204432|Acidobacteriia 204432|Acidobacteriia C Electron transfer flavoprotein FAD-binding domain - - - ko:K03522 - - - - ko00000,ko04147 - - - ETF,ETF_alpha HKD3_k127_1974490_2 204669.Acid345_3697 6.035e-87 294.0 COG2086@1|root,COG2086@2|Bacteria,3Y2PD@57723|Acidobacteria,2JK7K@204432|Acidobacteriia 204432|Acidobacteriia C Electron transfer flavoprotein domain - - - ko:K03521 - - - - ko00000 - - - ETF HKD3_k127_1974490_0 1125863.JAFN01000001_gene35 1.398e-104 344.0 COG0304@1|root,COG0304@2|Bacteria,1MU1X@1224|Proteobacteria,42MUZ@68525|delta/epsilon subdivisions,2WJT6@28221|Deltaproteobacteria 28221|Deltaproteobacteria I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP fabF - 2.3.1.179 ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119 RC00039,RC02728,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Ketoacyl-synt_C,ketoacyl-synt HKD3_k127_1996922_0 1121920.AUAU01000010_gene72 0.0 1095.0 COG0365@1|root,COG0365@2|Bacteria,3Y39K@57723|Acidobacteria 57723|Acidobacteria I Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA acsA - 6.2.1.1 ko:K01895 ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200 M00357 R00235,R00236,R00316,R00926,R01354 RC00004,RC00012,RC00043,RC00070,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000,ko01004 - - - ACAS_N,AMP-binding,AMP-binding_C HKD3_k127_1996922_2 1158338.JNLJ01000005_gene1655 1.222e-35 150.0 COG3746@1|root,COG3746@2|Bacteria,2G5GY@200783|Aquificae 200783|Aquificae P Phosphate-selective porin O and P - - - - - - - - - - - - Porin_O_P HKD3_k127_1996922_3 517418.Ctha_0672 7.745e-17 93.0 2DS9E@1|root,32VU1@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_1996922_1 234267.Acid_4902 2.599e-284 900.0 COG5549@1|root,COG5549@2|Bacteria,3Y2IY@57723|Acidobacteria 57723|Acidobacteria O Domain of unknown function (DUF5117) - - - - - - - - - - - - DUF4953,DUF5117,DUF5118 HKD3_k127_200514_9 278963.ATWD01000002_gene534 2.002e-39 163.0 COG4191@1|root,COG4191@2|Bacteria,3Y3X4@57723|Acidobacteria,2JING@204432|Acidobacteriia 204432|Acidobacteriia T Histidine kinase - - - - - - - - - - - - GAF_2,GAF_3,HATPase_c,HisKA,HisKA_7TM,PAS,PAS_4 HKD3_k127_200514_13 240015.ACP_1860 1.271e-05 58.0 COG4772@1|root,COG4772@2|Bacteria,3Y2I0@57723|Acidobacteria,2JJ0B@204432|Acidobacteriia 204432|Acidobacteriia P TonB-dependent receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - CarboxypepD_reg,Plug,TonB_dep_Rec HKD3_k127_200514_11 1340493.JNIF01000003_gene4121 9.688e-09 68.0 COG4219@1|root,COG4219@2|Bacteria,3Y301@57723|Acidobacteria 57723|Acidobacteria KT Peptidase M56 - - - - - - - - - - - - - HKD3_k127_200514_1 857087.Metme_3409 5.535e-170 544.0 COG0148@1|root,COG0148@2|Bacteria,1MU1N@1224|Proteobacteria,1RNQA@1236|Gammaproteobacteria,1XDS1@135618|Methylococcales 135618|Methylococcales F Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis eno - 4.2.1.11 ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 M00001,M00002,M00003,M00346,M00394 R00658 RC00349 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 - - - Enolase_C,Enolase_N HKD3_k127_200514_5 644966.Tmar_1340 3.037e-99 333.0 COG0444@1|root,COG0444@2|Bacteria,1TP6E@1239|Firmicutes,247NN@186801|Clostridia 186801|Clostridia P Belongs to the ABC transporter superfamily - - - ko:K02031,ko:K02032,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 - - ABC_tran,oligo_HPY HKD3_k127_200514_6 511051.CSE_11670 9.33e-79 286.0 COG4608@1|root,COG4608@2|Bacteria 2|Bacteria P Belongs to the ABC transporter superfamily oppF GO:0000166,GO:0003674,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008144,GO:0008150,GO:0009314,GO:0009628,GO:0015232,GO:0015886,GO:0016020,GO:0017076,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0050896,GO:0051179,GO:0051181,GO:0051184,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901678 3.6.3.24 ko:K02031,ko:K02032,ko:K10823,ko:K10824,ko:K12372,ko:K13892 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00324,M00348,M00439,M00440 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.11,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 - iAPECO1_1312.APECO1_362,iEC042_1314.EC042_1615,iEC042_1314.EC042_3846,iECABU_c1320.ECABU_c39820,iECED1_1282.ECED1_4219,iECH74115_1262.ECH74115_2095,iECOK1_1307.ECOK1_1402,iECS88_1305.ECS88_1315,iECSP_1301.ECSP_1968,iECUMN_1333.ECUMN_1737,iECW_1372.ECW_m1611,iECs_1301.ECs2087,iEKO11_1354.EKO11_2337,iPC815.YPO3999,iSF_1195.SF3575,iSFxv_1172.SFxv_3897,iS_1188.S4195,iUMN146_1321.UM146_10835,iUTI89_1310.UTI89_C1445,iWFL_1372.ECW_m1611,iZ_1308.Z2227,ic_1306.c4355 ABC_tran,oligo_HPY HKD3_k127_200514_0 1121920.AUAU01000018_gene1783 0.0 1142.0 COG1506@1|root,COG1506@2|Bacteria,3Y3XQ@57723|Acidobacteria 57723|Acidobacteria E Dienelactone hydrolase family - - - - - - - - - - - - PD40,Peptidase_S9 HKD3_k127_200514_4 1267535.KB906767_gene3077 3.523e-108 353.0 COG1136@1|root,COG1136@2|Bacteria,3Y30Q@57723|Acidobacteria,2JI7R@204432|Acidobacteriia 204432|Acidobacteriia V ABC transporter - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_200514_14 638303.Thal_0528 0.000159 53.0 COG2165@1|root,COG2165@2|Bacteria,2G43Q@200783|Aquificae 200783|Aquificae U general secretion pathway protein G gspG - - ko:K02456 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - N_methyl,T2SSG HKD3_k127_200514_7 644968.DFW101_1441 1.399e-60 224.0 COG1459@1|root,COG1459@2|Bacteria,1MV4U@1224|Proteobacteria,42NES@68525|delta/epsilon subdivisions,2WJ0V@28221|Deltaproteobacteria,2M9D6@213115|Desulfovibrionales 28221|Deltaproteobacteria NU PFAM type II secretion system - - - ko:K02653,ko:K12278 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - T2SSF HKD3_k127_200514_2 1303518.CCALI_00189 7.883e-132 439.0 COG2804@1|root,COG2804@2|Bacteria 2|Bacteria NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB gspE - - ko:K02454,ko:K02652 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02035,ko02044 3.A.15,3.A.15.2 - - T2SSE,T2SSE_N HKD3_k127_200514_3 1121439.dsat_0834 2.194e-131 434.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2WM8T@28221|Deltaproteobacteria,2M9IS@213115|Desulfovibrionales 28221|Deltaproteobacteria T Two component, sigma54 specific, transcriptional regulator, Fis family - - - ko:K07714 ko02020,map02020 M00500 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat HKD3_k127_200514_12 1500304.JQKY01000019_gene581 2.217e-06 57.0 COG2165@1|root,COG2165@2|Bacteria,1RDX2@1224|Proteobacteria,2U7GY@28211|Alphaproteobacteria,4BFN6@82115|Rhizobiaceae 28211|Alphaproteobacteria U Type II secretion system protein G gspG - - ko:K02456 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - N_methyl,T2SSG HKD3_k127_200514_10 585425.KR52_01010 2.41e-13 82.0 COG0457@1|root,COG0457@2|Bacteria,1G20P@1117|Cyanobacteria,1H45C@1129|Synechococcus 1117|Cyanobacteria S Tetratricopeptide repeat - - - - - - - - - - - - TIR_2,TPR_1,TPR_11,TPR_14,TPR_16,TPR_2,TPR_6,TPR_8 HKD3_k127_200514_8 1123256.KB907931_gene2846 8.154e-41 157.0 COG3267@1|root,COG3267@2|Bacteria,1MU3G@1224|Proteobacteria,1RMI0@1236|Gammaproteobacteria,1X4ZI@135614|Xanthomonadales 135614|Xanthomonadales U AAA domain - - - ko:K02450 - M00331 - - ko00000,ko00002,ko02044 9.B.42 - - AAA_22,PG_binding_1 HKD3_k127_2034684_1 1227739.Hsw_2638 1.578e-84 292.0 COG5000@1|root,COG5000@2|Bacteria,4NFQN@976|Bacteroidetes,47KW9@768503|Cytophagia 976|Bacteroidetes T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - - - - - - - - - - HATPase_c,PAS,PAS_8 HKD3_k127_2034684_3 1267535.KB906767_gene2187 2.234e-63 240.0 COG4798@1|root,COG4798@2|Bacteria,3Y5JR@57723|Acidobacteria 57723|Acidobacteria S Met-10+ like-protein - - - - - - - - - - - - Methyltransf_25,Methyltransf_31 HKD3_k127_2034684_5 709986.Deima_0058 1.271e-16 93.0 COG1228@1|root,COG1228@2|Bacteria 2|Bacteria Q imidazolonepropionase activity - - 3.5.2.18 ko:K15358 ko00760,ko01120,map00760,map01120 - R07984 RC01933 ko00000,ko00001,ko01000 - - - Amidohydro_1,Amidohydro_3 HKD3_k127_2034684_0 1218084.BBJK01000179_gene7966 5.174e-88 301.0 COG0604@1|root,COG0604@2|Bacteria,1R8NX@1224|Proteobacteria,2W0KY@28216|Betaproteobacteria,1K4PK@119060|Burkholderiaceae 28216|Betaproteobacteria C Alcohol dehydrogenase GroES-like domain - - 1.6.5.5 ko:K00344 - - - - ko00000,ko01000 - - - ADH_N,ADH_zinc_N_2 HKD3_k127_2034684_2 497964.CfE428DRAFT_6134 1.225e-81 281.0 COG1131@1|root,COG1131@2|Bacteria,46U5D@74201|Verrucomicrobia 74201|Verrucomicrobia V ATPases associated with a variety of cellular activities - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_2034684_4 1267534.KB906754_gene3224 3.118e-41 155.0 COG1725@1|root,COG1725@2|Bacteria 2|Bacteria K Transcriptional regulator - - - ko:K07979 - - - - ko00000,ko03000 - - - GntR HKD3_k127_2116541_23 1270193.JARP01000002_gene658 2.444e-19 94.0 COG4313@1|root,COG4313@2|Bacteria,4NW4N@976|Bacteroidetes,1I60R@117743|Flavobacteriia,2NVHT@237|Flavobacterium 976|Bacteroidetes C Putative MetA-pathway of phenol degradation - - - - - - - - - - - - Phenol_MetA_deg HKD3_k127_2116541_4 1415779.JOMH01000001_gene75 3.575e-167 540.0 COG3263@1|root,COG3263@2|Bacteria,1MVKV@1224|Proteobacteria,1RMCA@1236|Gammaproteobacteria,1XDBP@135614|Xanthomonadales 135614|Xanthomonadales P Transporter associated domain - - - - - - - - - - - - CorC_HlyC,Na_H_Exchanger,TrkA_C HKD3_k127_2116541_27 69279.BG36_01945 9.326e-12 71.0 2DNCX@1|root,32WUH@2|Bacteria,1NI94@1224|Proteobacteria,2UDAP@28211|Alphaproteobacteria,43PEW@69277|Phyllobacteriaceae 28211|Alphaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_2116541_0 443254.Marpi_0674 1.774e-282 880.0 COG0296@1|root,COG0296@2|Bacteria,2GDYI@200918|Thermotogae 200918|Thermotogae G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position glgB - 2.4.1.18 ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 M00565 R02110 - ko00000,ko00001,ko00002,ko01000,ko04147 - CBM48,GH13 - Alpha-amylase,Alpha-amylase_C,CBM_48 HKD3_k127_2116541_15 485913.Krac_5497 5.658e-73 256.0 COG0384@1|root,COG0384@2|Bacteria,2G8NU@200795|Chloroflexi 200795|Chloroflexi S PFAM Phenazine biosynthesis PhzC PhzF protein - - 5.3.3.17 ko:K06998 ko00405,ko01130,ko02024,map00405,map01130,map02024 M00835 - - ko00000,ko00001,ko00002,ko01000 - - - PhzC-PhzF HKD3_k127_2116541_18 671143.DAMO_2761 1.339e-62 226.0 COG0652@1|root,COG0652@2|Bacteria,2NPSW@2323|unclassified Bacteria 2|Bacteria O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides ppiA GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0030312,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0071704,GO:0071944,GO:0140096,GO:1901564 5.2.1.8 ko:K01802,ko:K03767,ko:K03768 ko01503,ko04217,map01503,map04217 - - - ko00000,ko00001,ko01000,ko03110,ko04147 - - - Pro_isomerase HKD3_k127_2116541_3 1089547.KB913013_gene2262 7.816e-173 565.0 COG0308@1|root,COG0308@2|Bacteria,4NEXH@976|Bacteroidetes,47JGQ@768503|Cytophagia 976|Bacteroidetes E PFAM Peptidase M1, membrane alanine aminopeptidase - - 3.4.11.2 ko:K01256 ko00480,ko01100,map00480,map01100 - R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 - - - Peptidase_M1 HKD3_k127_2116541_30 1122176.KB903574_gene4818 1.78e-05 56.0 2C08E@1|root,2ZBCG@2|Bacteria,4NGBR@976|Bacteroidetes 976|Bacteroidetes - - - - - - - - - - - - - - - HKD3_k127_2116541_5 204669.Acid345_0471 6.749e-162 533.0 COG0484@1|root,COG0484@2|Bacteria 2|Bacteria O heat shock protein binding - - - - - - - - - - - - - HKD3_k127_2116541_22 1392838.AWNM01000041_gene1368 6.903e-21 108.0 COG1280@1|root,COG1280@2|Bacteria,1R7UJ@1224|Proteobacteria,2WFM7@28216|Betaproteobacteria,3T656@506|Alcaligenaceae 28216|Betaproteobacteria E LysE type translocator - - - - - - - - - - - - LysE HKD3_k127_2116541_2 861299.J421_0892 8.622e-182 584.0 COG0076@1|root,COG0076@2|Bacteria,1ZTFP@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Pyridoxal-dependent decarboxylase conserved domain - - 4.1.1.86 ko:K13745 ko00260,ko01120,map00260,map01120 - R07650 RC00299 ko00000,ko00001,ko01000 - - - Pyridoxal_deC HKD3_k127_2116541_1 861299.J421_2659 1.889e-248 799.0 COG0612@1|root,COG0612@2|Bacteria,1ZT1M@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Insulinase (Peptidase family M16) - - - ko:K07263 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M16,Peptidase_M16_C HKD3_k127_2116541_13 926550.CLDAP_02770 5.917e-80 293.0 COG3345@1|root,COG3345@2|Bacteria,2G6M7@200795|Chloroflexi 200795|Chloroflexi G PFAM glycoside hydrolase, clan GH-D - - 3.2.1.22 ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 - R01101,R01103,R01104,R01194,R01329,R02926,R03634,R04019,R04470,R05549,R05961,R06091 RC00049,RC00059,RC00451 ko00000,ko00001,ko01000 - - - Glyco_hydro_36C,Glyco_hydro_36N,Melibiase HKD3_k127_2116541_24 452637.Oter_2730 7.364e-15 83.0 2A84C@1|root,30X53@2|Bacteria,46SPC@74201|Verrucomicrobia 74201|Verrucomicrobia - - - - - - - - - - - - - - - HKD3_k127_2116541_6 204669.Acid345_2713 1.431e-136 460.0 COG0484@1|root,COG2864@1|root,COG0484@2|Bacteria,COG2864@2|Bacteria,3Y6QW@57723|Acidobacteria 57723|Acidobacteria C Prokaryotic cytochrome b561 - - - - - - - - - - - - Cytochrom_c3_2,Ni_hydr_CYTB HKD3_k127_2116541_14 378806.STAUR_0010 5.498e-77 274.0 COG0642@1|root,COG2205@2|Bacteria,1PFIP@1224|Proteobacteria,4391K@68525|delta/epsilon subdivisions,2X473@28221|Deltaproteobacteria,2YYE0@29|Myxococcales 28221|Deltaproteobacteria T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c HKD3_k127_2116541_12 1297742.A176_03064 9.665e-81 275.0 COG0745@1|root,COG0745@2|Bacteria,1MWVI@1224|Proteobacteria 1224|Proteobacteria KT COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain ctrA GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - ko:K02483,ko:K07670,ko:K13584 ko02020,ko04112,map02020,map04112 M00461,M00512 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C HKD3_k127_2116541_26 456442.Mboo_0818 4.422e-12 79.0 COG3291@1|root,arCOG02508@2157|Archaea,2XUY6@28890|Euryarchaeota,2NAFS@224756|Methanomicrobia 224756|Methanomicrobia O PFAM PKD domain containing protein - - - - - - - - - - - - PKD HKD3_k127_2116541_10 595460.RRSWK_05050 1.998e-100 349.0 COG1409@1|root,COG1409@2|Bacteria 2|Bacteria S acid phosphatase activity - - - - - - - - - - - - Metallophos,Pur_ac_phosph_N HKD3_k127_2116541_9 595460.RRSWK_05050 1.52e-108 370.0 COG1409@1|root,COG1409@2|Bacteria 2|Bacteria S acid phosphatase activity - - - - - - - - - - - - Metallophos,Pur_ac_phosph_N HKD3_k127_2116541_11 595460.RRSWK_05050 4.502e-89 313.0 COG1409@1|root,COG1409@2|Bacteria 2|Bacteria S acid phosphatase activity - - - - - - - - - - - - Metallophos,Pur_ac_phosph_N HKD3_k127_2116541_17 595460.RRSWK_05050 4.922e-65 247.0 COG1409@1|root,COG1409@2|Bacteria 2|Bacteria S acid phosphatase activity - - - - - - - - - - - - Metallophos,Pur_ac_phosph_N HKD3_k127_2116541_21 28229.ND2E_1596 1.38e-23 107.0 COG1881@1|root,COG1881@2|Bacteria,1NQK5@1224|Proteobacteria,1S0T6@1236|Gammaproteobacteria 1236|Gammaproteobacteria S YHYH protein - - - - - - - - - - - - PBP,YHYH HKD3_k127_2116541_19 1394178.AWOO02000018_gene6642 3.577e-32 146.0 COG1262@1|root,COG1262@2|Bacteria,2GK9Q@201174|Actinobacteria,4EH55@85012|Streptosporangiales 201174|Actinobacteria S Sulfatase-modifying factor enzyme 1 - GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005509,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016667,GO:0016670,GO:0018158,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046872,GO:0046914,GO:0055114,GO:0071704,GO:0120147,GO:1901564,GO:1903135,GO:1903136 - - - - - - - - - - FGE-sulfatase HKD3_k127_2116541_8 1304872.JAGC01000003_gene2354 6.795e-118 414.0 COG1520@1|root,COG1520@2|Bacteria,1NYGT@1224|Proteobacteria,42TY0@68525|delta/epsilon subdivisions,2WQ74@28221|Deltaproteobacteria,2M9SS@213115|Desulfovibrionales 28221|Deltaproteobacteria S Arylsulfotransferase (ASST) - - - - - - - - - - - - Arylsulfotran_2,Arylsulfotrans HKD3_k127_2116541_29 1121124.JNIX01000016_gene2166 2.21e-08 64.0 COG3031@1|root,COG3031@2|Bacteria,1NHSV@1224|Proteobacteria,2UJMW@28211|Alphaproteobacteria 28211|Alphaproteobacteria U Type II secretion system protein C - - - ko:K02452 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - PDZ_2,T2SSC HKD3_k127_2116541_28 1158050.KB895461_gene2922 9.796e-12 78.0 COG3291@1|root,COG3291@2|Bacteria 2|Bacteria S metallopeptidase activity - - - - - - - - - - - - Beta_helix,Big_5,CBM_4_9 HKD3_k127_2116541_20 760192.Halhy_1558 1.315e-30 138.0 COG0265@1|root,COG1262@1|root,COG0265@2|Bacteria,COG1262@2|Bacteria,4NEUZ@976|Bacteroidetes,1IY04@117747|Sphingobacteriia 976|Bacteroidetes O PFAM Formylglycine-generating sulfatase enzyme - - - - - - - - - - - - FGE-sulfatase,Peptidase_C14,Trypsin_2 HKD3_k127_2116541_25 456442.Mboo_0818 3.517e-13 83.0 COG3291@1|root,arCOG02508@2157|Archaea,2XUY6@28890|Euryarchaeota,2NAFS@224756|Methanomicrobia 224756|Methanomicrobia O PFAM PKD domain containing protein - - - - - - - - - - - - PKD HKD3_k127_2116541_7 1408433.JHXV01000002_gene442 8.228e-125 420.0 COG1520@1|root,COG1520@2|Bacteria,4NHPR@976|Bacteroidetes,1HXXS@117743|Flavobacteriia 976|Bacteroidetes G Arylsulfotransferase (ASST) - - - - - - - - - - - - Arylsulfotrans HKD3_k127_2116541_16 1304872.JAGC01000003_gene2354 1.006e-69 256.0 COG1520@1|root,COG1520@2|Bacteria,1NYGT@1224|Proteobacteria,42TY0@68525|delta/epsilon subdivisions,2WQ74@28221|Deltaproteobacteria,2M9SS@213115|Desulfovibrionales 28221|Deltaproteobacteria S Arylsulfotransferase (ASST) - - - - - - - - - - - - Arylsulfotran_2,Arylsulfotrans HKD3_k127_217539_4 96561.Dole_2442 1.697e-19 89.0 COG0342@1|root,COG0342@2|Bacteria,1MV5U@1224|Proteobacteria,42M6V@68525|delta/epsilon subdivisions,2WJCI@28221|Deltaproteobacteria,2MHS8@213118|Desulfobacterales 28221|Deltaproteobacteria U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA secD - - ko:K03072,ko:K12257 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 2.A.6.4,3.A.5.2,3.A.5.7 - - SecD_SecF,Sec_GG HKD3_k127_217539_1 1198114.AciX9_3623 1.171e-63 230.0 COG0341@1|root,COG0341@2|Bacteria,3Y2ZT@57723|Acidobacteria,2JHZF@204432|Acidobacteriia 204432|Acidobacteriia U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA secF - - ko:K03074 ko03060,ko03070,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 2.A.6.4,3.A.5.2,3.A.5.7 - - SecD_SecF,Sec_GG HKD3_k127_217539_2 42256.RradSPS_1222 1.134e-60 233.0 COG1968@1|root,COG1968@2|Bacteria,2GJVG@201174|Actinobacteria,4CQ84@84995|Rubrobacteria 84995|Rubrobacteria V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin - - 3.6.1.27 ko:K06153 ko00550,map00550 - R05627 RC00002 ko00000,ko00001,ko01000,ko01011 - - - BacA HKD3_k127_217539_3 289376.THEYE_A1869 1.256e-38 160.0 COG2928@1|root,COG2928@2|Bacteria,3J0R2@40117|Nitrospirae 40117|Nitrospirae S Protein of unknown function (DUF502) - - - - - - - - - - - - DUF502 HKD3_k127_217539_0 1267535.KB906767_gene2605 0.0 1141.0 COG3808@1|root,COG3808@2|Bacteria,3Y34E@57723|Acidobacteria,2JJHT@204432|Acidobacteriia 204432|Acidobacteriia C Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force hppA - 3.6.1.1 ko:K15987 ko00190,map00190 - - - ko00000,ko00001,ko01000 3.A.10.1 - - H_PPase HKD3_k127_2247765_2 1265503.KB905160_gene2976 9.016e-63 218.0 28HMZ@1|root,2Z7WD@2|Bacteria,1MU3Q@1224|Proteobacteria,1RRUM@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Protein of unknown function (DUF3604) - - - - - - - - - - - - DUF3604 HKD3_k127_2247765_1 768671.ThimaDRAFT_1732 6.714e-96 331.0 COG4313@1|root,COG4313@2|Bacteria,1PC95@1224|Proteobacteria,1RZJZ@1236|Gammaproteobacteria,1WZES@135613|Chromatiales 135613|Chromatiales C Putative MetA-pathway of phenol degradation - - - - - - - - - - - - Phenol_MetA_deg HKD3_k127_2247765_3 1347342.BN863_9110 1.475e-40 154.0 2A3Y3@1|root,30SGF@2|Bacteria,4NZA3@976|Bacteroidetes,1IIYA@117743|Flavobacteriia 976|Bacteroidetes - - - - - - - - - - - - - - - HKD3_k127_2247765_0 1217718.ALOU01000007_gene1257 2.131e-231 735.0 28HMZ@1|root,2Z7WD@2|Bacteria,1MU3Q@1224|Proteobacteria 1224|Proteobacteria S Protein of unknown function (DUF3604) - - - - - - - - - - - - DUF3604 HKD3_k127_2247765_4 1096546.WYO_0255 2.438e-06 49.0 COG0405@1|root,COG0405@2|Bacteria,1MUV6@1224|Proteobacteria,2TQWP@28211|Alphaproteobacteria,1JRFA@119045|Methylobacteriaceae 28211|Alphaproteobacteria E Gamma-glutamyltranspeptidase ggt1 - 2.3.2.2,3.4.19.13 ko:K00681 ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100 - R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935 RC00064,RC00090,RC00096 ko00000,ko00001,ko01000,ko01002 - - - G_glu_transpept HKD3_k127_2265012_4 1379270.AUXF01000001_gene2737 4.954e-41 158.0 COG1506@1|root,COG1506@2|Bacteria,1ZSYK@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Prolyl oligopeptidase family - - - - - - - - - - - - Peptidase_S9 HKD3_k127_2265012_3 1198114.AciX9_1168 9.67e-63 226.0 COG2186@1|root,COG2186@2|Bacteria,3Y47U@57723|Acidobacteria,2JI8P@204432|Acidobacteriia 204432|Acidobacteriia K FCD - - - ko:K05799 - - - - ko00000,ko03000 - - - FCD,GntR HKD3_k127_2265012_1 1519464.HY22_10660 1.22e-169 544.0 COG2271@1|root,COG2271@2|Bacteria 2|Bacteria G transmembrane transporter activity exuT - - ko:K08191 - - - - ko00000,ko02000 2.A.1.14.2 - - MFS_1 HKD3_k127_2265012_2 1128421.JAGA01000002_gene1491 1.233e-167 541.0 2BXG3@1|root,2Z82R@2|Bacteria 2|Bacteria S tagaturonate epimerase - - 5.1.2.7 ko:K21619 ko00040,ko01100,map00040,map01100 - R11624 - ko00000,ko00001,ko01000 - - - UxaE HKD3_k127_2265012_0 518766.Rmar_2391 2.653e-170 547.0 COG5434@1|root,COG5434@2|Bacteria,4NEM8@976|Bacteroidetes 976|Bacteroidetes G Belongs to the glycosyl hydrolase 28 family - - - - - - - - - - - - Glyco_hydro_28,Glyco_hydro_88,Pectate_lyase_3 HKD3_k127_230647_9 234267.Acid_3965 6.316e-92 334.0 COG3210@1|root,COG3210@2|Bacteria 2|Bacteria U domain, Protein - - - ko:K15125 ko05133,map05133 - - - ko00000,ko00001,ko00536 - - - Beta_helix,CUB,Calx-beta,DUF3739,Haemagg_act,SdrD_B HKD3_k127_230647_10 234267.Acid_6682 3.854e-86 296.0 COG1294@1|root,COG1294@2|Bacteria,3Y3UT@57723|Acidobacteria 57723|Acidobacteria C Cytochrome d ubiquinol oxidase, subunit II - - 1.10.3.14 ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00153 R11325 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.4.3 - - Cyt_bd_oxida_II HKD3_k127_230647_3 234267.Acid_6681 1.606e-156 506.0 COG1271@1|root,COG1271@2|Bacteria,3Y44V@57723|Acidobacteria 57723|Acidobacteria C Cytochrome bd terminal oxidase subunit I - - 1.10.3.14 ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00153 R11325 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.4.3 - - Cyt_bd_oxida_I HKD3_k127_230647_13 1382359.JIAL01000001_gene2836 1.253e-67 245.0 COG1225@1|root,COG1225@2|Bacteria,3Y61N@57723|Acidobacteria,2JMBJ@204432|Acidobacteriia 204432|Acidobacteriia O Redoxin - - - - - - - - - - - - AhpC-TSA HKD3_k127_230647_14 1382359.JIAL01000001_gene2038 3.401e-46 178.0 COG4232@1|root,COG4233@1|root,COG4232@2|Bacteria,COG4233@2|Bacteria,3Y2KW@57723|Acidobacteria,2JIRQ@204432|Acidobacteriia 204432|Acidobacteriia CO Disulphide bond corrector protein DsbC - - 1.8.1.8 ko:K04084 - - - - ko00000,ko01000,ko03110 5.A.1.1 - - DsbC,DsbD,Thioredoxin_7 HKD3_k127_230647_12 1254432.SCE1572_51570 9.177e-76 264.0 COG3568@1|root,COG3568@2|Bacteria,1PPNP@1224|Proteobacteria,42QW2@68525|delta/epsilon subdivisions,2WMRN@28221|Deltaproteobacteria 28221|Deltaproteobacteria L PFAM Endonuclease Exonuclease phosphatase - - - - - - - - - - - - Exo_endo_phos HKD3_k127_230647_16 401526.TcarDRAFT_0466 3.075e-31 131.0 COG0778@1|root,COG0778@2|Bacteria,1V2D6@1239|Firmicutes,4H46P@909932|Negativicutes 909932|Negativicutes C Nitroreductase family - - - - - - - - - - - - Nitroreductase HKD3_k127_230647_2 945713.IALB_0988 3.778e-200 636.0 COG2978@1|root,COG2978@2|Bacteria 2|Bacteria H secondary active p-aminobenzoyl-glutamate transmembrane transporter activity ydaH - - ko:K12942 - - - - ko00000 - - - ABG_transport HKD3_k127_230647_1 234267.Acid_3464 1.77e-211 666.0 COG3669@1|root,COG3669@2|Bacteria,3Y43P@57723|Acidobacteria 2|Bacteria G PFAM glycoside hydrolase, family 29 - - 3.2.1.51 ko:K01206 ko00511,map00511 - - - ko00000,ko00001,ko01000,ko04147 - GH29 - Alpha_L_fucos,TAT_signal HKD3_k127_230647_4 234267.Acid_1577 1.904e-119 391.0 COG1082@1|root,COG1082@2|Bacteria,3Y8GU@57723|Acidobacteria 2|Bacteria G PFAM Xylose isomerase domain protein TIM barrel - - - - - - - - - - - - AP_endonuc_2 HKD3_k127_230647_0 234267.Acid_1953 0.0 1270.0 COG4447@1|root,COG4447@2|Bacteria,3Y487@57723|Acidobacteria 57723|Acidobacteria S cellulose binding - - - - - - - - - - - - - HKD3_k127_230647_15 1454004.AW11_02488 4.088e-38 158.0 COG0394@1|root,COG0704@1|root,COG0394@2|Bacteria,COG0704@2|Bacteria 2|Bacteria P negative regulation of phosphate transmembrane transport phoU GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 1.20.4.1,3.1.3.48 ko:K01104,ko:K02039,ko:K03741 - - - - ko00000,ko01000 - - - PhoU HKD3_k127_230647_11 517418.Ctha_0917 1.206e-84 294.0 COG0226@1|root,COG0226@2|Bacteria,1FE4N@1090|Chlorobi 1090|Chlorobi P TIGRFAM phosphate binding protein - - - ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - PBP_like_2 HKD3_k127_230647_8 517418.Ctha_0918 4.026e-110 379.0 COG0573@1|root,COG0573@2|Bacteria,1FE1M@1090|Chlorobi 1090|Chlorobi P TIGRFAM phosphate ABC transporter, inner membrane subunit PstC - - - ko:K02037 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - BPD_transp_1 HKD3_k127_230647_5 517418.Ctha_0919 2.084e-114 392.0 COG0581@1|root,COG0581@2|Bacteria,1FE3G@1090|Chlorobi 1090|Chlorobi P TIGRFAM phosphate ABC transporter, inner membrane subunit PstA - - - ko:K02038 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - BPD_transp_1 HKD3_k127_230647_6 517418.Ctha_0920 1.059e-110 363.0 COG1117@1|root,COG1117@2|Bacteria 2|Bacteria P ATPase-coupled phosphate ion transmembrane transporter activity pstB - 3.6.3.27 ko:K02036 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.7 - - ABC_tran HKD3_k127_230647_7 517418.Ctha_0921 3.698e-110 374.0 COG1117@1|root,COG1117@2|Bacteria,1FEHB@1090|Chlorobi 1090|Chlorobi P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system pstB - 3.6.3.27 ko:K02036 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.7 - - ABC_tran HKD3_k127_230661_10 84531.JMTZ01000003_gene2339 5.293e-78 268.0 COG0730@1|root,COG0730@2|Bacteria,1R6MR@1224|Proteobacteria,1S0QW@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Sulfite exporter TauE/SafE - - - - - - - - - - - - TauE HKD3_k127_230661_14 644282.Deba_2219 7.855e-41 162.0 COG1051@1|root,COG1051@2|Bacteria,1MWNH@1224|Proteobacteria,42T59@68525|delta/epsilon subdivisions,2WPMV@28221|Deltaproteobacteria 28221|Deltaproteobacteria F Belongs to the Nudix hydrolase family - - 3.6.1.13,3.6.1.55 ko:K01515,ko:K03574 ko00230,map00230 - R01054 RC00002 ko00000,ko00001,ko01000,ko03400 - - - NUDIX HKD3_k127_230661_11 1278073.MYSTI_02939 1.416e-61 216.0 COG0432@1|root,COG0432@2|Bacteria,1RA5G@1224|Proteobacteria,42QZ8@68525|delta/epsilon subdivisions,2WMV9@28221|Deltaproteobacteria,2YUYA@29|Myxococcales 28221|Deltaproteobacteria S Uncharacterised protein family UPF0047 - - - - - - - - - - - - UPF0047 HKD3_k127_230661_7 234267.Acid_2457 1.934e-86 294.0 COG1387@1|root,COG1387@2|Bacteria 2|Bacteria E zinc ion binding polX - - ko:K02347,ko:K04477 - - - - ko00000,ko03400 - - - HHH_8,PHP HKD3_k127_230661_15 452637.Oter_3758 3.092e-35 148.0 COG1477@1|root,COG1477@2|Bacteria,46W8K@74201|Verrucomicrobia,3K9TT@414999|Opitutae 414999|Opitutae H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein - - 2.7.1.180 ko:K03734 - - - - ko00000,ko01000 - - - ApbE HKD3_k127_230661_3 382464.ABSI01000013_gene1719 7.05e-149 486.0 COG0673@1|root,COG0673@2|Bacteria,46TK3@74201|Verrucomicrobia,2IVGR@203494|Verrucomicrobiae 203494|Verrucomicrobiae S Oxidoreductase family, C-terminal alpha/beta domain - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C HKD3_k127_230661_13 1047013.AQSP01000115_gene339 1.161e-42 161.0 295NE@1|root,2ZSZT@2|Bacteria 2|Bacteria S DoxX - - 1.8.5.2 ko:K16937 ko00920,ko01120,map00920,map01120 - R07177 - ko00000,ko00001,ko01000 3.D.4.9 - - DoxX HKD3_k127_230661_6 1123256.KB907937_gene1880 4.134e-88 323.0 COG0007@1|root,COG1648@1|root,COG0007@2|Bacteria,COG1648@2|Bacteria,1MUI0@1224|Proteobacteria,1RM9V@1236|Gammaproteobacteria,1X3CH@135614|Xanthomonadales 135614|Xanthomonadales H Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme cysG - 1.3.1.76,2.1.1.107,4.99.1.4 ko:K02302 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R02864,R03194,R03947 RC00003,RC00871,RC01012,RC01034 ko00000,ko00001,ko00002,ko01000 - - - CysG_dimeriser,NAD_binding_7,Sirohm_synth_M,TP_methylase HKD3_k127_230661_5 706587.Desti_1640 3.298e-109 385.0 COG1797@1|root,COG1797@2|Bacteria,1MV7Z@1224|Proteobacteria,42M8T@68525|delta/epsilon subdivisions,2WIXE@28221|Deltaproteobacteria 28221|Deltaproteobacteria H Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source cbiA - 6.3.5.11,6.3.5.9 ko:K02224 ko00860,ko01100,ko01120,map00860,map01100,map01120 - R05224,R05815 RC00010,RC01301 ko00000,ko00001,ko01000 - - - AAA_26,CbiA,GATase_3 HKD3_k127_230661_4 706587.Desti_2669 1.132e-143 467.0 COG5557@1|root,COG5557@2|Bacteria,1PFX4@1224|Proteobacteria,42NUN@68525|delta/epsilon subdivisions,2WJHN@28221|Deltaproteobacteria,2MQS4@213462|Syntrophobacterales 28221|Deltaproteobacteria C PFAM Polysulphide reductase, NrfD dsrP - - ko:K00185 - - - - ko00000 5.A.3 - - NrfD HKD3_k127_230661_8 706587.Desti_2670 1.072e-80 282.0 COG0437@1|root,COG0437@2|Bacteria,1NBU3@1224|Proteobacteria,42MNU@68525|delta/epsilon subdivisions,2WJRG@28221|Deltaproteobacteria,2MQSD@213462|Syntrophobacterales 28221|Deltaproteobacteria C 4Fe-4S dicluster domain dsrO - - ko:K00184 - - - - ko00000 5.A.3 - - Fer4_11,Fer4_4 HKD3_k127_230661_16 1121441.AUCX01000010_gene268 2.201e-30 125.0 arCOG10385@1|root,32SEM@2|Bacteria,1N1IG@1224|Proteobacteria,42TMW@68525|delta/epsilon subdivisions,2WQBW@28221|Deltaproteobacteria,2MC03@213115|Desulfovibrionales 28221|Deltaproteobacteria - - dsrJ - - - - - - - - - - - - HKD3_k127_230661_0 264732.Moth_1606 1.51e-267 831.0 COG0247@1|root,COG0247@2|Bacteria,1TSC1@1239|Firmicutes,24B10@186801|Clostridia,42FPP@68295|Thermoanaerobacterales 186801|Clostridia C 4Fe-4S dicluster domain hmeD - - - - - - - - - - - CCG,Fer4_8 HKD3_k127_230661_9 871963.Desdi_0246 2.729e-80 278.0 COG2181@1|root,COG2181@2|Bacteria,1UYRK@1239|Firmicutes,24FM8@186801|Clostridia,266ZT@186807|Peptococcaceae 186801|Clostridia C PFAM Nitrate reductase gamma subunit hmeC - - - - - - - - - - - Nitrate_red_gam HKD3_k127_230661_12 246194.CHY_2402 9.274e-49 179.0 COG2920@1|root,COG2920@2|Bacteria,1V6WF@1239|Firmicutes,24JRH@186801|Clostridia,42GKQ@68295|Thermoanaerobacterales 186801|Clostridia P TIGRFAM sulfur relay protein, TusE DsrC DsvC family - - - ko:K11179 ko04122,map04122 - - - ko00000,ko00001,ko01000,ko03016 - - - DsrC HKD3_k127_230661_2 1121428.DESHY_30086___1 2.173e-170 541.0 COG2221@1|root,COG2221@2|Bacteria,1TZD2@1239|Firmicutes,24DEF@186801|Clostridia,2610K@186807|Peptococcaceae 186801|Clostridia C TIGRFAM sulfite reductase, dissimilatory-type beta subunit dsrB - 1.8.99.5 ko:K11181 ko00633,ko00920,ko01100,ko01120,map00633,map00920,map01100,map01120 M00596 R00295,R00861,R08035 RC00065,RC01760 ko00000,ko00001,ko00002,ko01000 - - - Fer4,NIR_SIR,NIR_SIR_ferr HKD3_k127_230661_1 868595.Desca_2666 1.818e-172 548.0 COG2221@1|root,COG2221@2|Bacteria,1TRP0@1239|Firmicutes,24A5T@186801|Clostridia,260BJ@186807|Peptococcaceae 186801|Clostridia C PFAM nitrite and sulphite reductase 4Fe-4S dsrA - 1.8.99.5 ko:K11180 ko00633,ko00920,ko01100,ko01120,map00633,map00920,map01100,map01120 M00596 R00295,R00861,R08035 RC00065,RC01760 ko00000,ko00001,ko00002,ko01000 - - - NIR_SIR,NIR_SIR_ferr HKD3_k127_230661_17 1120988.AXWV01000006_gene975 6.085e-23 99.0 COG0493@1|root,COG1144@1|root,COG0493@2|Bacteria,COG1144@2|Bacteria,1MU2H@1224|Proteobacteria,1RREP@1236|Gammaproteobacteria,1Y40X@135624|Aeromonadales 135624|Aeromonadales C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - - - - - - - - - - Fer4,Fer4_20,Pyr_redox_2,Pyr_redox_3 HKD3_k127_2397409_8 861299.J421_3426 2.079e-64 236.0 COG0527@1|root,COG0527@2|Bacteria,1ZSXV@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Amino acid kinase family - - 2.7.2.4 ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R00480 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase HKD3_k127_2397409_7 1267533.KB906734_gene4125 1.871e-70 255.0 COG0460@1|root,COG0460@2|Bacteria,3Y2VY@57723|Acidobacteria,2JHYQ@204432|Acidobacteriia 204432|Acidobacteriia E homoserine dehydrogenase - - 1.1.1.3 ko:K00003 ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230 M00017,M00018 R01773,R01775 RC00087 ko00000,ko00001,ko00002,ko01000 - - - ACT,Homoserine_dh,NAD_binding_3 HKD3_k127_2397409_0 243231.GSU1183 1.505e-197 624.0 COG2873@1|root,COG2873@2|Bacteria,1NQME@1224|Proteobacteria,43DRR@68525|delta/epsilon subdivisions,2X70U@28221|Deltaproteobacteria 28221|Deltaproteobacteria E PFAM Cys Met metabolism metY-1 - 2.5.1.49 ko:K01740 ko00270,ko01100,map00270,map01100 - R01287,R04859 RC00020,RC02821,RC02848 ko00000,ko00001,ko01000 - - - Cys_Met_Meta_PP HKD3_k127_2397409_4 1128421.JAGA01000003_gene2973 3.383e-133 436.0 COG2021@1|root,COG2021@2|Bacteria,2NNZR@2323|unclassified Bacteria 2|Bacteria E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine metX GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 ko:K00641 ko00270,ko01100,ko01130,map00270,map01100,map01130 - R01776 RC00004,RC00041 ko00000,ko00001,ko01000 - - - Abhydrolase_1 HKD3_k127_2397409_3 661478.OP10G_2391 3.244e-156 506.0 COG1409@1|root,COG3669@1|root,COG1409@2|Bacteria,COG3669@2|Bacteria 2|Bacteria G Alpha-L-fucosidase - - 3.2.1.51 ko:K01206 ko00511,map00511 - - - ko00000,ko00001,ko01000,ko04147 - GH29 - Alpha_L_fucos,Fucosidase_C,PA14 HKD3_k127_2397409_1 335543.Sfum_2756 3.569e-165 542.0 COG0707@1|root,COG1413@1|root,COG0707@2|Bacteria,COG1413@2|Bacteria,1MVIB@1224|Proteobacteria,42ME1@68525|delta/epsilon subdivisions,2WJNY@28221|Deltaproteobacteria,2MRPC@213462|Syntrophobacterales 28221|Deltaproteobacteria M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) murG - 2.4.1.227 ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 - R05032,R05662 RC00005,RC00049 ko00000,ko00001,ko01000,ko01011 - GT28 - Glyco_tran_28_C,Glyco_transf_28 HKD3_k127_2397409_6 697282.Mettu_1526 1.051e-77 276.0 COG0472@1|root,COG0472@2|Bacteria,1MUTK@1224|Proteobacteria,1RNIG@1236|Gammaproteobacteria,1XEU1@135618|Methylococcales 135618|Methylococcales M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan mraY - 2.7.8.13 ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 - R05629,R05630 RC00002,RC02753 ko00000,ko00001,ko01000,ko01011 9.B.146 - - Glycos_transf_4,MraY_sig1 HKD3_k127_2397409_2 215803.DB30_2967 2.646e-164 524.0 2C57D@1|root,2Z7RS@2|Bacteria,1MX6G@1224|Proteobacteria,42Y78@68525|delta/epsilon subdivisions,2X3CW@28221|Deltaproteobacteria,2YUS0@29|Myxococcales 28221|Deltaproteobacteria S Protein of unknown function (DUF2891) - - - - - - - - - - - - DUF2891 HKD3_k127_2397409_5 338963.Pcar_2038 2.278e-98 334.0 COG0488@1|root,COG0488@2|Bacteria,1MU37@1224|Proteobacteria,42M2A@68525|delta/epsilon subdivisions,2WIJY@28221|Deltaproteobacteria,43S8W@69541|Desulfuromonadales 28221|Deltaproteobacteria S ABC transporter C-terminal domain - - - ko:K06158 - - - - ko00000,ko03012 - - - ABC_tran,ABC_tran_CTD,ABC_tran_Xtn HKD3_k127_239874_1 234267.Acid_1388 9.098e-178 569.0 COG0457@1|root,COG0823@1|root,COG0457@2|Bacteria,COG0823@2|Bacteria 2|Bacteria U Involved in the tonB-independent uptake of proteins dppX - - ko:K03641 - - - - ko00000,ko02000 2.C.1.2 - - PD40 HKD3_k127_239874_3 264732.Moth_1335 6.306e-82 281.0 COG2876@1|root,COG2876@2|Bacteria,1TP61@1239|Firmicutes,24812@186801|Clostridia,42F9V@68295|Thermoanaerobacterales 186801|Clostridia E PFAM DAHP synthetase I KDSA aroF - 2.5.1.54 ko:K03856 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R01826 RC00435 ko00000,ko00001,ko00002,ko01000 - - - DAHP_synth_1 HKD3_k127_239874_5 234267.Acid_3759 3.133e-56 203.0 COG0251@1|root,COG0251@2|Bacteria 2|Bacteria J oxidation-reduction process rapK GO:0003674,GO:0003824,GO:0016787,GO:0016801,GO:0016803 3.3.2.13,4.1.3.40,4.1.3.45 ko:K18239,ko:K18240 ko00130,ko00400,ko01100,ko01110,map00130,map00400,map01100,map01110 M00117 R01302,R10583,R10597 RC00350,RC00491,RC02148,RC03212 ko00000,ko00001,ko00002,ko01000 - - - Ribonuc_L-PSP HKD3_k127_239874_2 1250005.PHEL85_2092 1.171e-83 289.0 2DB9F@1|root,2Z7WN@2|Bacteria,4NIRI@976|Bacteroidetes,1I00X@117743|Flavobacteriia 976|Bacteroidetes - - - - - - - - - - - - - - - HKD3_k127_239874_0 404589.Anae109_1606 5.066e-223 701.0 COG0277@1|root,COG0277@2|Bacteria,1MUPW@1224|Proteobacteria,437ZU@68525|delta/epsilon subdivisions,2X39R@28221|Deltaproteobacteria,2YV0T@29|Myxococcales 28221|Deltaproteobacteria C Berberine and berberine like - - - - - - - - - - - - BBE,FAD_binding_4 HKD3_k127_239874_4 338966.Ppro_2994 7.898e-75 261.0 2CCV8@1|root,2Z7KX@2|Bacteria,1MY2J@1224|Proteobacteria,42PUV@68525|delta/epsilon subdivisions,2WKCH@28221|Deltaproteobacteria 28221|Deltaproteobacteria S EcsC protein family - - - - - - - - - - - - EcsC HKD3_k127_239874_6 479437.Elen_1180 1.456e-10 72.0 2996G@1|root,31UU0@2|Bacteria,2HW6Y@201174|Actinobacteria,4CY2N@84998|Coriobacteriia 84998|Coriobacteriia - - - - - - - - - - - - - - - HKD3_k127_2416119_7 714943.Mucpa_5186 4.671e-09 67.0 COG1266@1|root,COG1266@2|Bacteria,4NMMK@976|Bacteroidetes,1IU3S@117747|Sphingobacteriia 976|Bacteroidetes S PFAM Abortive infection protein - - - ko:K07052 - - - - ko00000 - - - Abi HKD3_k127_2416119_6 1499967.BAYZ01000120_gene3420 5.408e-49 184.0 COG2020@1|root,COG2020@2|Bacteria,2NR07@2323|unclassified Bacteria 2|Bacteria O Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - - - - - - - - - - PEMT HKD3_k127_2416119_2 1047013.AQSP01000130_gene1861 7.068e-303 941.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,2NNS9@2323|unclassified Bacteria 2|Bacteria EU peptidase S9 prolyl oligopeptidase active site yuxL - 3.4.19.1 ko:K01303 - - - - ko00000,ko01000,ko01002 - - - PD40,Peptidase_S9 HKD3_k127_2416119_4 1317122.ATO12_00045 1.386e-114 390.0 COG0624@1|root,COG0624@2|Bacteria,4NI66@976|Bacteroidetes,1HZ8W@117743|Flavobacteriia,2YJ50@290174|Aquimarina 976|Bacteroidetes E Peptidase dimerisation domain - - 3.4.17.11 ko:K01295 - - - - ko00000,ko01000,ko01002 - - - M20_dimer,Peptidase_M20,Peptidase_M28 HKD3_k127_2416119_0 29581.BW37_00870 0.0 1420.0 COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,1MX41@1224|Proteobacteria,2WBDI@28216|Betaproteobacteria,475K6@75682|Oxalobacteraceae 28216|Betaproteobacteria M Tricorn protease homolog - - - - - - - - - - - - PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ HKD3_k127_2416119_3 234267.Acid_0921 2.412e-154 509.0 COG3581@1|root,COG3581@2|Bacteria 2|Bacteria I 4 iron, 4 sulfur cluster binding - - - - - - - - - - - - - HKD3_k127_2416119_1 234267.Acid_0922 0.0 1187.0 COG1924@1|root,COG3580@1|root,COG1924@2|Bacteria,COG3580@2|Bacteria,3Y7VB@57723|Acidobacteria 57723|Acidobacteria I CoA enzyme activase uncharacterised domain (DUF2229) - - - - - - - - - - - - BcrAD_BadFG,DUF2229 HKD3_k127_2416119_5 234267.Acid_6192 8.889e-88 318.0 COG0457@1|root,COG0457@2|Bacteria,3Y77J@57723|Acidobacteria 57723|Acidobacteria M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - - - - - - - - - - DUF1736,TPR_11,TPR_16 HKD3_k127_2416119_8 983917.RGE_11760 2.924e-07 53.0 COG0137@1|root,COG0137@2|Bacteria,1MV0Y@1224|Proteobacteria,2VJ7Z@28216|Betaproteobacteria,1KJ2B@119065|unclassified Burkholderiales 28216|Betaproteobacteria E Belongs to the argininosuccinate synthase family. Type 2 subfamily argG GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 M00029,M00844,M00845 R01954 RC00380,RC00629 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Arginosuc_synth HKD3_k127_2420332_1 926569.ANT_01430 8.537e-183 578.0 COG0362@1|root,COG0362@2|Bacteria,2GBID@200795|Chloroflexi 200795|Chloroflexi H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH gnd - 1.1.1.343,1.1.1.44 ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 M00004,M00006 R01528,R10221 RC00001,RC00539 ko00000,ko00001,ko00002,ko01000 - - - 6PGD,NAD_binding_2 HKD3_k127_2420332_0 1267535.KB906767_gene773 4.49e-191 602.0 COG0524@1|root,COG0524@2|Bacteria,3Y3DE@57723|Acidobacteria,2JI9I@204432|Acidobacteriia 204432|Acidobacteriia G pfkB family carbohydrate kinase - - - - - - - - - - - - PfkB HKD3_k127_2420332_2 1394178.AWOO02000014_gene7784 1.749e-115 396.0 COG4225@1|root,COG4225@2|Bacteria 2|Bacteria S unsaturated chondroitin disaccharide hydrolase activity - - - - - - - - - - - - - HKD3_k127_2420332_3 234267.Acid_7362 3.246e-97 331.0 COG1210@1|root,COG1210@2|Bacteria,3Y39W@57723|Acidobacteria 2|Bacteria M PFAM Nucleotidyl transferase galU - 2.7.7.9 ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 M00129,M00361,M00362,M00549 R00289 RC00002 ko00000,ko00001,ko00002,ko01000 - - iIT341.HP0646 NTP_transferase HKD3_k127_2420332_4 1403819.BATR01000092_gene2789 4.295e-41 156.0 COG1577@1|root,COG1577@2|Bacteria,46V85@74201|Verrucomicrobia 74201|Verrucomicrobia I mevalonate kinase activity - - - - - - - - - - - - GHMP_kinases_C,GHMP_kinases_N HKD3_k127_2427937_4 1111479.AXAR01000003_gene1517 2.631e-98 326.0 COG1788@1|root,COG1788@2|Bacteria,1V21Q@1239|Firmicutes,4HB3E@91061|Bacilli,279JQ@186823|Alicyclobacillaceae 91061|Bacilli I Coenzyme A transferase scoA - 2.8.3.5 ko:K01028 ko00072,ko00280,ko00650,map00072,map00280,map00650 - R00410 RC00014 ko00000,ko00001,ko01000 - - - CoA_trans HKD3_k127_2427937_5 682795.AciX8_4801 1.598e-91 308.0 COG2057@1|root,COG2057@2|Bacteria,3Y3EC@57723|Acidobacteria,2JIV4@204432|Acidobacteriia 204432|Acidobacteriia I Coenzyme A transferase - - 2.8.3.5 ko:K01029 ko00072,ko00280,ko00650,map00072,map00280,map00650 - R00410 RC00014 ko00000,ko00001,ko01000 - - - CoA_trans HKD3_k127_2427937_10 1379270.AUXF01000003_gene3484 7.057e-37 147.0 COG1595@1|root,COG1595@2|Bacteria,1ZT3B@142182|Gemmatimonadetes 142182|Gemmatimonadetes K ECF sigma factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 HKD3_k127_2427937_13 1114856.C496_22454 5.844e-07 62.0 arCOG04555@1|root,arCOG04555@2157|Archaea,2XUY2@28890|Euryarchaeota,23TMB@183963|Halobacteria 183963|Halobacteria S Integral membrane protein CcmA involved in cell shape determination - - - - - - - - - - - - Bactofilin HKD3_k127_2427937_3 234267.Acid_1288 4.788e-119 400.0 COG0260@1|root,COG0260@2|Bacteria,3Y33T@57723|Acidobacteria 57723|Acidobacteria E Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides pepA - 3.4.11.1 ko:K01255 ko00480,ko01100,map00480,map01100 - R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 - - - Peptidase_M17,Peptidase_M17_N HKD3_k127_2427937_7 639030.JHVA01000001_gene2991 2.27e-66 259.0 COG0860@1|root,COG0860@2|Bacteria,3Y3M0@57723|Acidobacteria,2JI9V@204432|Acidobacteriia 204432|Acidobacteriia M Ami_3 - - 3.5.1.28 ko:K01448 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 - - - AMIN,Amidase_3 HKD3_k127_2427937_0 1382359.JIAL01000001_gene136 3.024e-196 637.0 COG1674@1|root,COG1674@2|Bacteria,3Y3CJ@57723|Acidobacteria,2JHRN@204432|Acidobacteriia 204432|Acidobacteriia D Ftsk_gamma - - - ko:K03466 - - - - ko00000,ko03036 3.A.12 - - FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma HKD3_k127_2427937_2 264732.Moth_1069 1.764e-173 563.0 COG0595@1|root,COG0595@2|Bacteria,1TQ9G@1239|Firmicutes,2488J@186801|Clostridia,42F33@68295|Thermoanaerobacterales 186801|Clostridia S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay rnj - - ko:K12574 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - Lactamase_B,RMMBL HKD3_k127_2427937_9 1442599.JAAN01000033_gene1633 6.974e-56 206.0 COG0030@1|root,COG0030@2|Bacteria,1MVNU@1224|Proteobacteria,1RMHW@1236|Gammaproteobacteria,1X38K@135614|Xanthomonadales 135614|Xanthomonadales J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits ksgA GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 ko:K02528 - - R10716 RC00003,RC03257 ko00000,ko01000,ko03009 - - - RrnaAD HKD3_k127_2427937_12 671143.DAMO_2063 1.651e-23 115.0 COG3824@1|root,COG3824@2|Bacteria,2NPZF@2323|unclassified Bacteria 2|Bacteria S Zincin-like metallopeptidase MA20_43655 - 2.7.2.8 ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028 R02649 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 - - - Zincin_1 HKD3_k127_2427937_8 1089455.MOPEL_020_00350 2.69e-60 216.0 COG0177@1|root,COG0177@2|Bacteria,2GJ01@201174|Actinobacteria,4F6A7@85018|Dermatophilaceae 201174|Actinobacteria L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate nth GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0030312,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 4.2.99.18 ko:K10773 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - EndIII_4Fe-2S,HhH-GPD HKD3_k127_2427937_6 1379270.AUXF01000006_gene164 4.483e-74 255.0 COG1974@1|root,COG1974@2|Bacteria,1ZSSM@142182|Gemmatimonadetes 142182|Gemmatimonadetes K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair lexA - 3.4.21.88 ko:K01356 - M00729 - - ko00000,ko00002,ko01000,ko01002,ko03400 - - - LexA_DNA_bind,Peptidase_S24 HKD3_k127_2427937_11 1499967.BAYZ01000147_gene716 2.809e-32 134.0 COG1595@1|root,COG1595@2|Bacteria,2NPR9@2323|unclassified Bacteria 2|Bacteria K Sigma-70 region 2 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 HKD3_k127_2427937_1 443144.GM21_2305 4.663e-184 607.0 COG1200@1|root,COG1200@2|Bacteria,1MWN2@1224|Proteobacteria,42NF8@68525|delta/epsilon subdivisions,2WKBA@28221|Deltaproteobacteria,43TAY@69541|Desulfuromonadales 28221|Deltaproteobacteria L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) recG - 3.6.4.12 ko:K03655 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C,RecG_wedge HKD3_k127_2429898_3 404589.Anae109_0481 1.413e-18 90.0 COG0596@1|root,COG0596@2|Bacteria,1MUVB@1224|Proteobacteria,42WB3@68525|delta/epsilon subdivisions 1224|Proteobacteria S Alpha beta hydrolase dehH - 3.8.1.3 ko:K01561 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 - R05287 RC00697 ko00000,ko00001,ko01000 - - - Abhydrolase_1 HKD3_k127_2429898_0 28152.DJ57_1051 5.725e-120 401.0 COG1752@1|root,COG1752@2|Bacteria,1NT1Q@1224|Proteobacteria,1RP9M@1236|Gammaproteobacteria,41ETQ@629|Yersinia 1236|Gammaproteobacteria S Patatin-like phospholipase - - - - - - - - - - - - Patatin HKD3_k127_2429898_2 305700.B447_01946 7.04e-40 163.0 2CAM1@1|root,301FE@2|Bacteria,1RJ36@1224|Proteobacteria,2VTPY@28216|Betaproteobacteria,2KYRR@206389|Rhodocyclales 206389|Rhodocyclales - - - - - - - - - - - - - - - HKD3_k127_2429898_1 1054213.HMPREF9946_02653 3.017e-117 386.0 COG2267@1|root,COG2267@2|Bacteria,1QTZP@1224|Proteobacteria,2TZDV@28211|Alphaproteobacteria 28211|Alphaproteobacteria I Serine aminopeptidase, S33 - - - - - - - - - - - - Hydrolase_4 HKD3_k127_2440305_4 1047013.AQSP01000133_gene2153 2.18e-75 273.0 COG0706@1|root,COG0706@2|Bacteria,2NP6C@2323|unclassified Bacteria 2|Bacteria U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins yidC GO:0002790,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022607,GO:0031224,GO:0031226,GO:0032940,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051205,GO:0051234,GO:0051259,GO:0051260,GO:0051641,GO:0061024,GO:0065003,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044,ko03029 2.A.9 - - 60KD_IMP,YidC_periplas HKD3_k127_2440305_5 1286106.MPL1_04217 6.309e-18 88.0 COG0759@1|root,COG0759@2|Bacteria,1N6U4@1224|Proteobacteria,1SCG6@1236|Gammaproteobacteria,4615Y@72273|Thiotrichales 72273|Thiotrichales S Could be involved in insertion of integral membrane proteins into the membrane - - - ko:K08998 - - - - ko00000 - - - Haemolytic HKD3_k127_2440305_6 648996.Theam_0471 4.01e-17 86.0 COG0594@1|root,COG0594@2|Bacteria,2G4D4@200783|Aquificae 200783|Aquificae J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme rnpA - 3.1.26.5 ko:K03536 - - - - ko00000,ko01000,ko03016 - - - Ribonuclease_P HKD3_k127_2440305_7 319795.Dgeo_1568 1.31e-15 76.0 COG0230@1|root,COG0230@2|Bacteria 2|Bacteria J Ribosomal protein L34 rpmH GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02914 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L34 HKD3_k127_2440305_1 204669.Acid345_0001 3.371e-152 494.0 COG0593@1|root,COG0593@2|Bacteria,3Y2HA@57723|Acidobacteria,2JHN7@204432|Acidobacteriia 204432|Acidobacteriia L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids dnaA - - ko:K02313 ko02020,ko04112,map02020,map04112 - - - ko00000,ko00001,ko03032,ko03036 - - - Bac_DnaA,Bac_DnaA_C,DnaA_N HKD3_k127_2440305_3 204669.Acid345_0002 9.569e-94 320.0 COG0592@1|root,COG0592@2|Bacteria,3Y2WE@57723|Acidobacteria,2JI4X@204432|Acidobacteriia 204432|Acidobacteriia L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria - - 2.7.7.7 ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_beta,DNA_pol3_beta_2,DNA_pol3_beta_3 HKD3_k127_2440305_0 56780.SYN_02049 3.711e-279 900.0 COG0187@1|root,COG0187@2|Bacteria,1MVKT@1224|Proteobacteria,42M7M@68525|delta/epsilon subdivisions,2WJ9X@28221|Deltaproteobacteria,2MQ5F@213462|Syntrophobacterales 28221|Deltaproteobacteria L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner gyrB - 5.99.1.3 ko:K02470 - - - - ko00000,ko01000,ko03032,ko03400 - - - DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim HKD3_k127_2440305_2 926566.Terro_0585 9.304e-125 406.0 COG0188@1|root,COG0188@2|Bacteria,3Y65S@57723|Acidobacteria,2JKXZ@204432|Acidobacteriia 204432|Acidobacteriia L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner gyrA - 5.99.1.3 ko:K02469 - - - - ko00000,ko01000,ko03032,ko03400 - - - DNA_gyraseA_C,DNA_topoisoIV HKD3_k127_245285_0 234267.Acid_5975 2.802e-224 722.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,3Y3V0@57723|Acidobacteria 2|Bacteria EU peptidase S9B dipeptidylpeptidase IV domain protein ptpA_1 - 3.4.14.5 ko:K01278 ko04974,map04974 - - - ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 - - - DPPIV_N,PD40,Peptidase_S9 HKD3_k127_245285_4 1340493.JNIF01000003_gene4131 2.962e-53 194.0 COG0461@1|root,COG0461@2|Bacteria 2|Bacteria F orotate phosphoribosyltransferase activity pyrE - 2.4.2.10 ko:K00762 ko00240,ko01100,map00240,map01100 M00051 R01870 RC00611 ko00000,ko00001,ko00002,ko01000 - - - Pribosyltran HKD3_k127_245285_3 867903.ThesuDRAFT_00591 1.634e-57 213.0 COG0101@1|root,COG0101@2|Bacteria,1TQUY@1239|Firmicutes,248W2@186801|Clostridia,3WCIF@538999|Clostridiales incertae sedis 186801|Clostridia J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs truA - 5.4.99.12 ko:K06173 - - - - ko00000,ko01000,ko03016 - - - PseudoU_synth_1 HKD3_k127_245285_1 1340493.JNIF01000003_gene4513 6.883e-95 318.0 COG0020@1|root,COG0020@2|Bacteria,3Y485@57723|Acidobacteria 57723|Acidobacteria I Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids - - 2.5.1.31 ko:K00806 ko00900,ko01110,map00900,map01110 - R06447 RC00279,RC02839 ko00000,ko00001,ko01000,ko01006 - - - Prenyltransf HKD3_k127_245285_5 1232410.KI421418_gene2267 6.702e-27 126.0 COG4589@1|root,COG4589@2|Bacteria,1R34Q@1224|Proteobacteria,42QTH@68525|delta/epsilon subdivisions,2WQ6V@28221|Deltaproteobacteria,43SXU@69541|Desulfuromonadales 28221|Deltaproteobacteria M PFAM phosphatidate cytidylyltransferase cdsA - 2.7.7.41 ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 M00093 R01799 RC00002 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_1 HKD3_k127_245285_2 290397.Adeh_3583 3.741e-64 243.0 COG0743@1|root,COG0743@2|Bacteria,1MU4G@1224|Proteobacteria,42NI1@68525|delta/epsilon subdivisions,2WK14@28221|Deltaproteobacteria 28221|Deltaproteobacteria I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) dxr GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 ko:K00099 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05688 RC01452 ko00000,ko00001,ko00002,ko01000 - - - DXPR_C,DXP_redisom_C,DXP_reductoisom HKD3_k127_2454310_0 502025.Hoch_3351 1.147e-176 567.0 COG1138@1|root,COG3088@1|root,COG1138@2|Bacteria,COG3088@2|Bacteria,1MUQS@1224|Proteobacteria,42P4Q@68525|delta/epsilon subdivisions,2WK5G@28221|Deltaproteobacteria,2YU4N@29|Myxococcales 28221|Deltaproteobacteria O Cytochrome c-type biogenesis protein ccmF - - ko:K02198 - - - - ko00000,ko02000 9.B.14.1 - - CcmF_C,Cytochrom_C_asm HKD3_k127_2454310_19 448385.sce8171 1.658e-13 79.0 2ANI1@1|root,31DGW@2|Bacteria,1QARK@1224|Proteobacteria,43E3E@68525|delta/epsilon subdivisions,2WZKG@28221|Deltaproteobacteria,2Z2BA@29|Myxococcales 28221|Deltaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_2454310_10 1125863.JAFN01000001_gene3012 2.215e-44 185.0 COG1131@1|root,COG1131@2|Bacteria,1RGM1@1224|Proteobacteria,43ADE@68525|delta/epsilon subdivisions,2X5TA@28221|Deltaproteobacteria 28221|Deltaproteobacteria V ABC transporter - - 3.6.3.41 ko:K02193 ko02010,map02010 M00259 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.107 - - ABC_tran HKD3_k127_2454310_7 502025.Hoch_3360 9.341e-63 223.0 COG2386@1|root,COG2386@2|Bacteria,1QF23@1224|Proteobacteria,42RAM@68525|delta/epsilon subdivisions,2WMS1@28221|Deltaproteobacteria,2YVDV@29|Myxococcales 28221|Deltaproteobacteria U Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes ccmB - - ko:K02194 ko02010,map02010 M00259 - - ko00000,ko00001,ko00002,ko02000 3.A.1.107 - - CcmB HKD3_k127_2454310_9 502025.Hoch_3361 9.319e-53 193.0 COG0755@1|root,COG0755@2|Bacteria,1MU61@1224|Proteobacteria,430WM@68525|delta/epsilon subdivisions,2WVP8@28221|Deltaproteobacteria,2Z2VW@29|Myxococcales 28221|Deltaproteobacteria O Cytochrome C assembly protein - - - ko:K02195 ko02010,map02010 M00259 - - ko00000,ko00001,ko00002,ko02000 3.A.1.107 - - Cytochrom_C_asm HKD3_k127_2454310_8 682795.AciX8_4443 5.846e-53 198.0 COG0639@1|root,COG0639@2|Bacteria,3Y3U2@57723|Acidobacteria,2JIPQ@204432|Acidobacteriia 204432|Acidobacteriia T Calcineurin-like phosphoesterase superfamily domain - - - - - - - - - - - - Metallophos_2 HKD3_k127_2454310_14 638303.Thal_0550 5.384e-26 122.0 COG0703@1|root,COG0703@2|Bacteria,2G46N@200783|Aquificae 200783|Aquificae F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate aroK GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 ko:K00891 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02412 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - SKI HKD3_k127_2454310_2 1125863.JAFN01000001_gene764 3.428e-117 391.0 COG0128@1|root,COG0128@2|Bacteria,1MWMK@1224|Proteobacteria,42N01@68525|delta/epsilon subdivisions,2WKJQ@28221|Deltaproteobacteria 28221|Deltaproteobacteria E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate aroA GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R03460 RC00350 ko00000,ko00001,ko00002,ko01000 - - - EPSP_synthase HKD3_k127_2454310_15 204669.Acid345_2515 8.194e-26 124.0 COG2172@1|root,COG2172@2|Bacteria,3Y4TY@57723|Acidobacteria,2JJGJ@204432|Acidobacteriia 204432|Acidobacteriia T Histidine kinase-like ATPase domain - - 2.7.11.1 ko:K04757 - - - - ko00000,ko01000,ko01001,ko03021 - - - HATPase_c_2 HKD3_k127_2454310_6 338966.Ppro_0018 1.13e-69 245.0 COG0483@1|root,COG0483@2|Bacteria,1MUQT@1224|Proteobacteria,42R1W@68525|delta/epsilon subdivisions,2WMQ4@28221|Deltaproteobacteria,43SF7@69541|Desulfuromonadales 28221|Deltaproteobacteria G Inositol monophosphatase family suhB - 3.1.3.25 ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 M00131 R01185,R01186,R01187 RC00078 ko00000,ko00001,ko00002,ko01000 - - - Inositol_P HKD3_k127_2454310_21 861299.J421_1377 4.529e-07 63.0 2EQJ9@1|root,33I5A@2|Bacteria,1ZTSN@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HKD3_k127_2454310_13 1120949.KB903317_gene1645 2.799e-33 146.0 COG0463@1|root,COG1287@1|root,COG0463@2|Bacteria,COG1287@2|Bacteria 2|Bacteria S oligosaccharyl transferase activity - - 2.4.1.83 ko:K00721 ko00510,ko01100,map00510,map01100 - R01009 RC00005 ko00000,ko00001,ko01000,ko01003 - GT2 - Glycos_transf_2,PMT_2 HKD3_k127_2454310_16 240015.ACP_1908 1.61e-23 108.0 COG1238@1|root,COG1238@2|Bacteria,3Y52F@57723|Acidobacteria,2JJK2@204432|Acidobacteriia 204432|Acidobacteriia S PFAM SNARE associated Golgi protein - - - - - - - - - - - - SNARE_assoc HKD3_k127_2454310_1 383372.Rcas_0760 1.627e-117 391.0 COG0463@1|root,COG0463@2|Bacteria,2G5X5@200795|Chloroflexi,377Y9@32061|Chloroflexia 32061|Chloroflexia M PFAM glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 HKD3_k127_2454310_18 316067.Geob_3465 4.69e-17 96.0 COG2373@1|root,COG2931@1|root,COG4257@1|root,COG5029@1|root,COG2373@2|Bacteria,COG2931@2|Bacteria,COG4257@2|Bacteria,COG5029@2|Bacteria 2|Bacteria O Prenyltransferase - - - ko:K13277 ko02024,map02024 - - - ko00000,ko00001,ko01000,ko01002,ko03110 - - - A2M,An_peroxidase,CHRD,CarboxypepD_reg,Prenyltrans HKD3_k127_2454310_11 1122180.Lokhon_00093 3.582e-37 154.0 COG0392@1|root,COG0392@2|Bacteria 2|Bacteria M lysyltransferase activity mprF - - ko:K07027 - - - - ko00000,ko02000 4.D.2 - - LPG_synthase_TM HKD3_k127_2454310_3 1499967.BAYZ01000195_gene3102 3.532e-93 321.0 COG0438@1|root,COG0438@2|Bacteria,2NQRB@2323|unclassified Bacteria 2|Bacteria M Glycosyl transferase 4-like domain - - - - - - - - - - - - Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1 HKD3_k127_2454310_17 1088721.NSU_1091 8.652e-23 111.0 COG0500@1|root,COG2226@2|Bacteria,1RKCG@1224|Proteobacteria,2UA8V@28211|Alphaproteobacteria,2KA5C@204457|Sphingomonadales 204457|Sphingomonadales Q Methyltransferase domain - - - - - - - - - - - - Methyltransf_11 HKD3_k127_2454310_4 1142394.PSMK_04130 3.783e-89 317.0 COG0451@1|root,COG0451@2|Bacteria,2IYS9@203682|Planctomycetes 203682|Planctomycetes M NmrA-like family - - - - - - - - - - - - Epimerase HKD3_k127_2454310_5 766499.C357_23070 1.744e-70 252.0 COG0110@1|root,COG0110@2|Bacteria 2|Bacteria S O-acyltransferase activity - - 2.3.1.79 ko:K00661 - - - - ko00000,ko01000 - - - Hexapep,Hexapep_2 HKD3_k127_2454310_12 1385935.N836_10100 7.11e-34 139.0 COG0438@1|root,COG0438@2|Bacteria,1G4KT@1117|Cyanobacteria,1HCQM@1150|Oscillatoriales 1117|Cyanobacteria M PFAM Glycosyl transferases group 1 - - - - - - - - - - - - Glyco_trans_4_2,Glyco_transf_4,Glycos_transf_1 HKD3_k127_2461986_0 102129.Lepto7375DRAFT_2567 7.441e-19 96.0 COG1413@1|root,COG1413@2|Bacteria,1G233@1117|Cyanobacteria 1117|Cyanobacteria C PBS lyase HEAT-like repeat - - - - - - - - - - - - HEAT_2,HEAT_PBS,Metallophos,NACHT,NB-ARC,Peptidase_C14,Trypsin_2 HKD3_k127_2465245_1 243231.GSU1326 2.963e-60 213.0 COG1200@1|root,COG1200@2|Bacteria,1MWN2@1224|Proteobacteria,42NF8@68525|delta/epsilon subdivisions,2WKBA@28221|Deltaproteobacteria,43TAY@69541|Desulfuromonadales 28221|Deltaproteobacteria L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) recG - 3.6.4.12 ko:K03655 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C,RecG_wedge HKD3_k127_2465245_3 404589.Anae109_2064 8.338e-36 143.0 COG0742@1|root,COG0742@2|Bacteria,1MXKW@1224|Proteobacteria,42U1F@68525|delta/epsilon subdivisions,2WWMK@28221|Deltaproteobacteria,2Z2ZS@29|Myxococcales 28221|Deltaproteobacteria L Methyltransferase domain - - - - - - - - - - - - Cons_hypoth95 HKD3_k127_2465245_2 234267.Acid_7275 1.657e-58 212.0 COG0669@1|root,COG0669@2|Bacteria,3Y4B6@57723|Acidobacteria 57723|Acidobacteria H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate coaD - 2.7.7.3 ko:K00954 ko00770,ko01100,map00770,map01100 M00120 R03035 RC00002 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_like HKD3_k127_2465245_0 1191523.MROS_1373 5.236e-77 264.0 COG0436@1|root,COG0436@2|Bacteria 2|Bacteria E Aminotransferase - - 2.6.1.1 ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 - R00355,R00694,R00734,R00896,R02433,R02619,R05052 RC00006 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 HKD3_k127_2475772_1 1163407.UU7_09190 6.475e-110 362.0 COG0644@1|root,COG2440@1|root,COG0644@2|Bacteria,COG2440@2|Bacteria,1MVU6@1224|Proteobacteria,1RNY5@1236|Gammaproteobacteria,1X31X@135614|Xanthomonadales 135614|Xanthomonadales C Electron transfer flavoprotein-ubiquinone oxidoreductase etf-QO - 1.5.5.1 ko:K00311 - - - - ko00000,ko01000 - - - ETF_QO,FAD_binding_2,NAD_binding_8,Thi4 HKD3_k127_2475772_3 1283299.AUKG01000002_gene3748 1.269e-83 297.0 COG1028@1|root,COG1028@2|Bacteria,2GNUM@201174|Actinobacteria,4CPHJ@84995|Rubrobacteria 84995|Rubrobacteria IQ Belongs to the short-chain dehydrogenases reductases (SDR) family - - - - - - - - - - - - adh_short HKD3_k127_2475772_2 1122604.JONR01000013_gene3250 2.346e-99 334.0 COG1028@1|root,COG1028@2|Bacteria,1MUBQ@1224|Proteobacteria,1RQJT@1236|Gammaproteobacteria 1236|Gammaproteobacteria IQ Belongs to the short-chain dehydrogenases reductases (SDR) family fabG - 1.1.1.100 ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short,adh_short_C2 HKD3_k127_2475772_0 1123253.AUBD01000008_gene522 4.795e-147 477.0 COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,1RM93@1236|Gammaproteobacteria,1X3A8@135614|Xanthomonadales 135614|Xanthomonadales I Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation atoB - 2.3.1.9 ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 M00088,M00095,M00373,M00374,M00375 R00238,R01177 RC00004,RC00326 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Thiolase_C,Thiolase_N HKD3_k127_2483355_15 234267.Acid_1428 1.731e-11 72.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,3Y2PK@57723|Acidobacteria 57723|Acidobacteria KLTU WD40 domain protein beta Propeller - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PD40,Pkinase HKD3_k127_2483355_1 760192.Halhy_6351 1.447e-282 894.0 COG2366@1|root,COG2366@2|Bacteria,4NEIX@976|Bacteroidetes,1IPU7@117747|Sphingobacteriia 976|Bacteroidetes S COG2366 Protein related to penicillin acylase - - 3.5.1.11 ko:K01434 ko00311,ko01130,map00311,map01130 - R02170 RC00166,RC00328 ko00000,ko00001,ko01000,ko01002 - - - Penicil_amidase HKD3_k127_2483355_2 709991.Odosp_3645 7.348e-187 596.0 COG0006@1|root,COG0006@2|Bacteria,4NG40@976|Bacteroidetes,2FMSQ@200643|Bacteroidia,22WVB@171551|Porphyromonadaceae 976|Bacteroidetes E Aminopeptidase P, N-terminal domain pepP - 3.4.11.9 ko:K01262 - - - - ko00000,ko01000,ko01002 - - - AMP_N,Peptidase_M24 HKD3_k127_2483355_0 761193.Runsl_1070 0.0 1455.0 COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,4NGU2@976|Bacteroidetes,47NFD@768503|Cytophagia 976|Bacteroidetes M Tricorn protease homolog - - - - - - - - - - - - PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ HKD3_k127_2483355_17 1298863.AUEP01000005_gene2616 8.134e-11 69.0 COG1238@1|root,COG1238@2|Bacteria 2|Bacteria I metal cluster binding - - - - - - - - - - - - SNARE_assoc HKD3_k127_2483355_3 485918.Cpin_1363 3.441e-131 437.0 COG2303@1|root,COG2303@2|Bacteria,4NEF2@976|Bacteroidetes,1IXR8@117747|Sphingobacteriia 976|Bacteroidetes E GMC oxidoreductase - - - - - - - - - - - - FAD_binding_2,GMC_oxred_C,GMC_oxred_N,NAD_binding_8 HKD3_k127_2483355_6 485918.Cpin_1364 2.16e-76 275.0 COG0673@1|root,COG0673@2|Bacteria 2|Bacteria S inositol 2-dehydrogenase activity - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C HKD3_k127_2483355_8 1122939.ATUD01000021_gene4086 3.427e-63 225.0 COG0204@1|root,COG0204@2|Bacteria,2IHH7@201174|Actinobacteria,4CPY0@84995|Rubrobacteria 84995|Rubrobacteria I Phosphate acyltransferases - - - - - - - - - - - - Acyltransferase HKD3_k127_2483355_9 1047013.AQSP01000092_gene317 2.989e-57 207.0 COG0778@1|root,COG0778@2|Bacteria,2NR7M@2323|unclassified Bacteria 2|Bacteria C Nitroreductase family - - - - - - - - - - - - Nitroreductase HKD3_k127_2483355_18 1144275.COCOR_02770 3.481e-10 71.0 2BTEV@1|root,32NM3@2|Bacteria,1Q3VF@1224|Proteobacteria,4343D@68525|delta/epsilon subdivisions,2X516@28221|Deltaproteobacteria,2YZYV@29|Myxococcales 28221|Deltaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_2483355_16 1121396.KB892916_gene74 3.033e-11 75.0 2CM5J@1|root,33NXS@2|Bacteria,1NHWC@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - HKD3_k127_2483355_4 234267.Acid_1881 6.749e-107 354.0 COG1131@1|root,COG1131@2|Bacteria 2|Bacteria V ATPase activity - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_2483355_11 234267.Acid_1882 1.004e-41 169.0 2DF1J@1|root,2ZQ4G@2|Bacteria 2|Bacteria S ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_2 HKD3_k127_2483355_12 644282.Deba_1697 1.056e-32 135.0 COG0500@1|root,COG2226@2|Bacteria,1N3WC@1224|Proteobacteria,42URQ@68525|delta/epsilon subdivisions,2WQGW@28221|Deltaproteobacteria 28221|Deltaproteobacteria Q PFAM Methyltransferase type 11 - - - - - - - - - - - - Methyltransf_25,Methyltransf_31 HKD3_k127_2483355_7 1128421.JAGA01000002_gene974 1.009e-65 232.0 COG0637@1|root,COG0637@2|Bacteria,2NPXK@2323|unclassified Bacteria 2|Bacteria S TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - 5.4.2.6 ko:K01838 ko00500,map00500 - R02728,R11310 RC00408 ko00000,ko00001,ko01000 - - - HAD_2 HKD3_k127_2483355_13 530564.Psta_4082 2.52e-21 109.0 COG3209@1|root,COG4932@1|root,COG3209@2|Bacteria,COG4932@2|Bacteria,2IYH3@203682|Planctomycetes 203682|Planctomycetes M domain protein - - - - - - - - - - - - Dockerin_1,SdrD_B HKD3_k127_2483355_14 78898.MVEG_12259T0 3.527e-14 86.0 COG0571@1|root,KOG0701@2759|Eukaryota,39MBT@33154|Opisthokonta,3P0EB@4751|Fungi,1GSK2@112252|Fungi incertae sedis 4751|Fungi A Calcineurin-like phosphoesterase - - - - - - - - - - - - Metallophos HKD3_k127_2483355_5 671143.DAMO_0748 8.339e-97 328.0 COG1071@1|root,COG1071@2|Bacteria,2NPBB@2323|unclassified Bacteria 2|Bacteria C Dehydrogenase E1 component bfmBA - 1.2.4.1,1.2.4.4 ko:K00161,ko:K00166,ko:K11381,ko:K21416 ko00010,ko00020,ko00280,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00280,map00620,map00640,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00036,M00307 R00014,R00209,R01699,R03270,R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997 RC00004,RC00027,RC00627,RC02742,RC02743,RC02744,RC02882,RC02883,RC02949,RC02953 br01601,ko00000,ko00001,ko00002,ko01000 - - - E1_dh,Transket_pyr,Transketolase_C HKD3_k127_2483355_10 1382306.JNIM01000001_gene3088 3.914e-42 158.0 COG0022@1|root,COG0022@2|Bacteria,2G60F@200795|Chloroflexi 200795|Chloroflexi C PFAM Transketolase central region - - - ko:K21417 - - - - ko00000,ko01000 - - - Transket_pyr,Transketolase_C HKD3_k127_2492521_3 1238182.C882_1705 1.477e-21 111.0 COG0382@1|root,COG0382@2|Bacteria,1MVS1@1224|Proteobacteria,2TVKN@28211|Alphaproteobacteria,2JPZ0@204441|Rhodospirillales 204441|Rhodospirillales H UbiA prenyltransferase family bchG - 2.5.1.133,2.5.1.62 ko:K04040 ko00860,ko01100,ko01110,map00860,map01100,map01110 - R06284,R09067,R11514,R11517 RC00020 ko00000,ko00001,ko01000,ko01006 - - - UbiA HKD3_k127_2492521_4 1280380.KR100_09145 2.581e-18 100.0 COG1836@1|root,COG1836@2|Bacteria,1G07R@1117|Cyanobacteria,1GZBJ@1129|Synechococcus 1117|Cyanobacteria S membrane - GO:0005575,GO:0016020 - - - - - - - - - - DUF92 HKD3_k127_2492521_5 868131.MSWAN_2333 8.51e-06 59.0 COG0170@1|root,arCOG01880@2157|Archaea,2Y1MD@28890|Euryarchaeota 28890|Euryarchaeota I PFAM phosphatidate cytidylyltransferase - - - - - - - - - - - - - HKD3_k127_2492521_2 90675.XP_010432573.1 1.179e-56 211.0 COG0451@1|root,KOG1502@2759|Eukaryota,37JYY@33090|Viridiplantae,3G71H@35493|Streptophyta,3HP0I@3699|Brassicales 35493|Streptophyta V NmrA-like family - - 1.1.1.354 ko:K15891 ko00900,ko00909,ko01130,map00900,map00909,map01130 - R10412 RC00649 ko00000,ko00001,ko01000 - - - Epimerase HKD3_k127_2492521_1 1121346.KB899822_gene2902 1.684e-63 230.0 COG1089@1|root,COG1089@2|Bacteria,1UJFF@1239|Firmicutes,4HF5Y@91061|Bacilli,275YJ@186822|Paenibacillaceae 91061|Bacilli M Polysaccharide biosynthesis protein - - 1.1.1.281 ko:K15856 ko00051,ko00520,map00051,map00520 - R03397,R03399 RC00182 ko00000,ko00001,ko01000 - - - GDP_Man_Dehyd HKD3_k127_2492521_0 368407.Memar_0186 1.828e-118 390.0 COG1088@1|root,arCOG01371@2157|Archaea,2XUZX@28890|Euryarchaeota,2N94H@224756|Methanomicrobia 224756|Methanomicrobia M Male sterility protein - - 4.2.1.46 ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 M00793 R06513 RC00402 ko00000,ko00001,ko00002,ko01000 - - - GDP_Man_Dehyd HKD3_k127_2493066_0 1125863.JAFN01000001_gene2144 2.551e-95 331.0 COG3225@1|root,COG3225@2|Bacteria,1MUXW@1224|Proteobacteria,42MRY@68525|delta/epsilon subdivisions,2WJ4F@28221|Deltaproteobacteria 28221|Deltaproteobacteria N transport system involved in gliding motility, auxiliary - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_2,ABC_transp_aux HKD3_k127_2493066_3 880073.Calab_2473 5.12e-34 149.0 2DN50@1|root,32VJ4@2|Bacteria,2NQ0E@2323|unclassified Bacteria 2|Bacteria S Domain of unknown function (DUF4340) - - - - - - - - - - - - DUF4340 HKD3_k127_2493066_1 945713.IALB_1560 2.325e-91 329.0 COG2027@1|root,COG2027@2|Bacteria 2|Bacteria M serine-type D-Ala-D-Ala carboxypeptidase activity dacB - 3.4.16.4 ko:K07259 ko00550,map00550 - - - ko00000,ko00001,ko01000,ko01002,ko01011 - - - Peptidase_S13 HKD3_k127_2493066_2 234267.Acid_4549 3.529e-42 165.0 2A3BS@1|root,30RTX@2|Bacteria,3Y943@57723|Acidobacteria 57723|Acidobacteria - - - - - - - - - - - - - - - HKD3_k127_2493066_4 1379270.AUXF01000007_gene931 1.255e-29 126.0 COG0013@1|root,COG0013@2|Bacteria,1ZT0G@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Threonyl and Alanyl tRNA synthetase second additional domain - - 6.1.1.7 ko:K01872 ko00970,map00970 M00359,M00360 R03038 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - DHHA1,tRNA-synt_2c,tRNA_SAD HKD3_k127_2505208_6 925409.KI911562_gene683 3.974e-46 180.0 COG1181@1|root,COG1181@2|Bacteria,4P8F6@976|Bacteroidetes 2|Bacteria M Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain - - 6.3.2.4 ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 - R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Dala_Dala_lig_C,Dala_Dala_lig_N HKD3_k127_2505208_10 398767.Glov_3140 3.617e-09 63.0 COG5336@1|root,COG5336@2|Bacteria 2|Bacteria C function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex atpI - - ko:K02116 - - - - ko00000,ko00194 3.A.2.1 - - ATPase_gene1 HKD3_k127_2505208_12 1492737.FEM08_30200 3.391e-06 56.0 2APM0@1|root,31EQB@2|Bacteria,4PD9M@976|Bacteroidetes,1IDST@117743|Flavobacteriia,2NZ4H@237|Flavobacterium 976|Bacteroidetes - - - - - - - - - - - - - - - HKD3_k127_2505208_2 1047013.AQSP01000119_gene1285 1.66e-70 248.0 COG0356@1|root,COG0356@2|Bacteria,2NPRQ@2323|unclassified Bacteria 2|Bacteria C it plays a direct role in the translocation of protons across the membrane atpB GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194,ko03110 3.A.2.1 - - ATP-synt_A HKD3_k127_2505208_8 1125863.JAFN01000001_gene2920 4.43e-14 84.0 COG0636@1|root,COG0636@2|Bacteria,1NAIE@1224|Proteobacteria,42VAI@68525|delta/epsilon subdivisions,2WRI4@28221|Deltaproteobacteria 28221|Deltaproteobacteria C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation atpE GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - ATP-synt_C HKD3_k127_2505208_5 324602.Caur_3095 1.979e-47 184.0 COG0697@1|root,COG0697@2|Bacteria,2G7RS@200795|Chloroflexi,377VC@32061|Chloroflexia 32061|Chloroflexia EG EamA-like transporter family - - - - - - - - - - - - EamA HKD3_k127_2505208_0 1382359.JIAL01000001_gene1956 1.485e-275 864.0 COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,3Y34Y@57723|Acidobacteria,2JHQ9@204432|Acidobacteriia 204432|Acidobacteriia C Dehydrogenase E1 component - - 1.2.4.4 ko:K11381 ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130 M00036 R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997 RC00027,RC00627,RC02743,RC02883,RC02949,RC02953 br01601,ko00000,ko00001,ko00002,ko01000 - - - E1_dh,Transket_pyr,Transketolase_C HKD3_k127_2505208_7 861299.J421_6341 2.623e-33 143.0 COG1917@1|root,COG1917@2|Bacteria,1ZTY8@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Cupin domain - - - - - - - - - - - - Cupin_2 HKD3_k127_2505208_1 479434.Sthe_0290 5.087e-76 263.0 COG1028@1|root,COG1028@2|Bacteria,2G8II@200795|Chloroflexi,27XKN@189775|Thermomicrobia 189775|Thermomicrobia IQ Dehydrogenase reductase sdr - - 1.1.1.100 ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short_C2 HKD3_k127_2505208_11 1128421.JAGA01000002_gene1581 2.243e-08 67.0 COG5650@1|root,COG5650@2|Bacteria 2|Bacteria M phosphatidylinositol metabolic process - - - ko:K13671 - - - - ko00000,ko01000,ko01003 - GT87 - GT87 HKD3_k127_2505208_3 1379698.RBG1_1C00001G1850 2.677e-51 192.0 COG0705@1|root,COG0705@2|Bacteria,2NPSK@2323|unclassified Bacteria 2|Bacteria S Rhomboid family - - - - - - - - - - - - Rhomboid HKD3_k127_2505208_4 1265505.ATUG01000003_gene66 1.803e-49 191.0 COG0477@1|root,COG2814@2|Bacteria,1QUTR@1224|Proteobacteria,42RH5@68525|delta/epsilon subdivisions,2X73Z@28221|Deltaproteobacteria,2MHZ3@213118|Desulfobacterales 28221|Deltaproteobacteria EGP Major Facilitator Superfamily - - - ko:K08223 - - - - ko00000,ko02000 2.A.1.35 - - MFS_1 HKD3_k127_2505208_9 1499967.BAYZ01000167_gene6737 4.71e-14 78.0 COG0728@1|root,COG0728@2|Bacteria,2NNX8@2323|unclassified Bacteria 2|Bacteria U Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane murJ - - ko:K03980 - - - - ko00000,ko01011,ko02000 2.A.66.4 - - MVIN HKD3_k127_2527469_1 1123277.KB893180_gene2411 1.323e-79 271.0 COG3664@1|root,COG3664@2|Bacteria,4NHQ0@976|Bacteroidetes,47N7Z@768503|Cytophagia 976|Bacteroidetes G PFAM glycoside hydrolase family 39 - - 3.2.1.37 ko:K01198 ko00520,ko01100,map00520,map01100 - R01433 RC00467 ko00000,ko00001,ko01000 - GH43 - Glyco_hydro_39 HKD3_k127_2527469_0 452637.Oter_0359 4.665e-195 621.0 COG3507@1|root,COG3507@2|Bacteria 2|Bacteria G Belongs to the glycosyl hydrolase 43 family - - - - - - - - - - - - F5_F8_type_C,Glyco_hydro_43 HKD3_k127_2527469_3 1123228.AUIH01000020_gene3351 4.303e-11 69.0 COG2445@1|root,COG2445@2|Bacteria,1RD67@1224|Proteobacteria,1SAKV@1236|Gammaproteobacteria,1XQ5C@135619|Oceanospirillales 1236|Gammaproteobacteria S Protein of unknown function DUF86 - - - - - - - - - - - - DUF86 HKD3_k127_2527469_4 1255043.TVNIR_0032 2.728e-05 55.0 COG1669@1|root,COG1669@2|Bacteria 2|Bacteria S nucleotidyltransferase activity - - - ko:K07075,ko:K07076 - - - - ko00000 - - - NTP_transf_2 HKD3_k127_2527469_2 1385517.N800_02750 1.064e-25 112.0 COG0457@1|root,COG3710@1|root,COG5616@1|root,COG0457@2|Bacteria,COG3710@2|Bacteria,COG5616@2|Bacteria,1MUMZ@1224|Proteobacteria,1S720@1236|Gammaproteobacteria,1X954@135614|Xanthomonadales 135614|Xanthomonadales K Transcriptional regulatory protein, C terminal - - - - - - - - - - - - Trans_reg_C HKD3_k127_25458_2 404380.Gbem_3389 1.856e-178 571.0 COG2195@1|root,COG2195@2|Bacteria,1MUWK@1224|Proteobacteria,42PS0@68525|delta/epsilon subdivisions,2WJU3@28221|Deltaproteobacteria 28221|Deltaproteobacteria E TIGRFAM aminoacyl-histidine dipeptidase - - - ko:K01270 ko00480,ko01100,map00480,map01100 - R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 - - - M20_dimer,Peptidase_M20,Peptidase_M28 HKD3_k127_25458_5 1128427.KB904821_gene174 2.374e-83 287.0 COG0705@1|root,COG0705@2|Bacteria,1G5IY@1117|Cyanobacteria,1HF1W@1150|Oscillatoriales 1117|Cyanobacteria S Rhomboid family - - - - - - - - - - - - Rhomboid HKD3_k127_25458_3 215803.DB30_1529 3.457e-163 527.0 COG2304@1|root,COG2304@2|Bacteria,1R8EZ@1224|Proteobacteria,433AE@68525|delta/epsilon subdivisions,2WYFQ@28221|Deltaproteobacteria,2YY3M@29|Myxococcales 28221|Deltaproteobacteria S IgA Peptidase M64 - - - - - - - - - - - - M64_N,Peptidase_M64 HKD3_k127_25458_7 234267.Acid_7855 6.107e-55 199.0 COG2323@1|root,COG2323@2|Bacteria,3Y4R1@57723|Acidobacteria 57723|Acidobacteria S Protein of unknown function (DUF421) - - - - - - - - - - - - DUF421 HKD3_k127_25458_1 1123242.JH636436_gene559 1.718e-183 590.0 COG1620@1|root,COG1620@2|Bacteria,2IWWM@203682|Planctomycetes 203682|Planctomycetes C L-lactate permease - - - ko:K03303 - - - - ko00000,ko02000 2.A.14 - - Lactate_perm HKD3_k127_25458_0 1382359.JIAL01000001_gene577 1.109e-268 848.0 COG1217@1|root,COG1217@2|Bacteria,3Y33Q@57723|Acidobacteria,2JIIC@204432|Acidobacteriia 204432|Acidobacteriia T GTP-binding protein TypA - - - ko:K06207 - - - - ko00000 - - - EFG_C,GTP_EFTU,GTP_EFTU_D2 HKD3_k127_25458_4 1382303.JPOM01000001_gene2298 1.353e-84 292.0 COG0300@1|root,COG0300@2|Bacteria,1MWNZ@1224|Proteobacteria,2VEWB@28211|Alphaproteobacteria,2KFU5@204458|Caulobacterales 204458|Caulobacterales S Belongs to the short-chain dehydrogenases reductases (SDR) family - - - ko:K07124 - - - - ko00000 - - - adh_short HKD3_k127_25458_6 1499967.BAYZ01000148_gene1760 1.472e-55 209.0 COG0771@1|root,COG0771@2|Bacteria,2NPCH@2323|unclassified Bacteria 2|Bacteria M Mur ligase middle domain murD - 6.3.2.9 ko:K01925,ko:K01932 ko00471,ko00550,ko01100,map00471,map00550,map01100 - R02783 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase_C,Mur_ligase_M HKD3_k127_25458_8 572479.Hprae_0468 1.12e-24 115.0 29EG8@1|root,334DW@2|Bacteria,1UPPM@1239|Firmicutes,25HKM@186801|Clostridia 186801|Clostridia S Capsule biosynthesis CapC - - - ko:K22116 - - - - ko00000 - - - Caps_synth_CapC HKD3_k127_25458_9 1304875.JAFZ01000003_gene601 1.082e-10 72.0 28JNG@1|root,2Z9ES@2|Bacteria,3TAC2@508458|Synergistetes 508458|Synergistetes - - - - - - - - - - - - - - - HKD3_k127_2560990_1 1340493.JNIF01000003_gene1675 1.458e-169 572.0 COG1629@1|root,COG4771@2|Bacteria,3Y2HF@57723|Acidobacteria 57723|Acidobacteria P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg,TonB_dep_Rec HKD3_k127_2560990_5 1267533.KB906733_gene3362 1.872e-97 343.0 COG0457@1|root,COG3710@1|root,COG5616@1|root,COG0457@2|Bacteria,COG3710@2|Bacteria,COG5616@2|Bacteria,3Y7E7@57723|Acidobacteria,2JKGS@204432|Acidobacteriia 204432|Acidobacteriia K Transcriptional regulatory protein, C terminal - - - - - - - - - - - - Trans_reg_C HKD3_k127_2560990_12 1313421.JHBV01000041_gene3702 5.361e-38 167.0 COG4733@1|root,COG4733@2|Bacteria 2|Bacteria S cellulase activity - - - - - - - - - - - - CHU_C,LTD,fn3 HKD3_k127_2560990_3 357808.RoseRS_0010 1.177e-108 398.0 COG0823@1|root,COG0823@2|Bacteria,2G8T5@200795|Chloroflexi,376FH@32061|Chloroflexia 32061|Chloroflexia U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 HKD3_k127_2560990_0 856793.MICA_967 1.674e-222 698.0 COG0114@1|root,COG0114@2|Bacteria,1MUQI@1224|Proteobacteria,2TQM7@28211|Alphaproteobacteria,4BP5W@82117|unclassified Alphaproteobacteria 28211|Alphaproteobacteria C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate fumC GO:0003674,GO:0003824,GO:0004333,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006106,GO:0006108,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 4.2.1.2 ko:K01679 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211 M00009,M00011,M00173,M00376 R01082 RC00443 ko00000,ko00001,ko00002,ko01000 - - - FumaraseC_C,Lyase_1 HKD3_k127_2560990_8 1304880.JAGB01000001_gene7 1.126e-61 225.0 COG1082@1|root,COG1082@2|Bacteria,1UZYH@1239|Firmicutes,24I07@186801|Clostridia 186801|Clostridia G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2 HKD3_k127_2560990_4 1288963.ADIS_0251 1.744e-108 360.0 COG1082@1|root,COG1082@2|Bacteria 2|Bacteria G myo-inosose-2 dehydratase activity - - - - - - - - - - - - AP_endonuc_2 HKD3_k127_2560990_2 1288963.ADIS_2849 2.029e-121 400.0 COG2133@1|root,COG2133@2|Bacteria,4PMM3@976|Bacteroidetes,47NGM@768503|Cytophagia 976|Bacteroidetes G Methane oxygenase PmoA - - - - - - - - - - - - PmoA HKD3_k127_2560990_6 1499967.BAYZ01000148_gene1758 1.075e-84 291.0 28JNG@1|root,2Z9ES@2|Bacteria,2NPDF@2323|unclassified Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_2560990_11 246197.MXAN_2903 6.066e-42 171.0 COG1073@1|root,COG1073@2|Bacteria 2|Bacteria S thiolester hydrolase activity - - - - - - - - - - - - - HKD3_k127_2560990_9 1183438.GKIL_3942 1.805e-57 206.0 COG1595@1|root,COG1595@2|Bacteria 2|Bacteria K DNA-templated transcription, initiation - - - ko:K02405 ko02020,ko02025,ko02026,ko02040,ko05111,map02020,map02025,map02026,map02040,map05111 - - - ko00000,ko00001,ko02035,ko03021 - - - Sigma70_ECF HKD3_k127_2560990_10 448385.sce2235 4.183e-52 212.0 COG0515@1|root,COG0515@2|Bacteria 448385.sce2235|- KLT protein kinase activity - - - - - - - - - - - - - HKD3_k127_2560990_7 352165.HMPREF7215_1457 2.58e-62 221.0 28NEN@1|root,30SR3@2|Bacteria,3TB3M@508458|Synergistetes 508458|Synergistetes - - - - - - - - - - - - - - - HKD3_k127_2560990_13 645512.GCWU000246_01505 5.008e-18 85.0 COG4666@1|root,COG4666@2|Bacteria,3TAIY@508458|Synergistetes 508458|Synergistetes S Citrate transporter - - - - - - - - - - - - - HKD3_k127_2565672_13 1047013.AQSP01000036_gene1385 4.509e-40 154.0 COG4796@1|root,COG4796@2|Bacteria 2|Bacteria U Type ii and iii secretion system protein pulQ - - ko:K02453 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - Cohesin,STN,Secretin,Secretin_N HKD3_k127_2565672_2 497964.CfE428DRAFT_4279 3.014e-134 441.0 COG0773@1|root,COG0773@2|Bacteria,46THM@74201|Verrucomicrobia 74201|Verrucomicrobia M Mur ligase middle domain protein - - 6.3.2.45 ko:K02558 - - - - ko00000,ko01000 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M HKD3_k127_2565672_10 1341151.ASZU01000025_gene2986 1.172e-58 215.0 COG1619@1|root,COG1619@2|Bacteria,1TRBB@1239|Firmicutes,4HAWT@91061|Bacilli,27B0F@186824|Thermoactinomycetaceae 91061|Bacilli V LD-carboxypeptidase ykfA - 3.4.17.13 ko:K01297 - - - - ko00000,ko01000,ko01002,ko01011 - - - Peptidase_S66 HKD3_k127_2565672_9 671143.DAMO_1466 2.336e-73 272.0 COG1472@1|root,COG1472@2|Bacteria,2NNZB@2323|unclassified Bacteria 2|Bacteria G Glycoside hydrolase family 3 domain protein - - 3.2.1.52 ko:K01207 ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501 M00628 R00022,R05963,R07809,R07810,R10831 RC00049 ko00000,ko00001,ko00002,ko01000 - - - Glyco_hydro_3,Glyco_hydro_3_C HKD3_k127_2565672_16 1254432.SCE1572_22045 2.645e-28 124.0 2DMMW@1|root,32SIJ@2|Bacteria,1N004@1224|Proteobacteria,42TSJ@68525|delta/epsilon subdivisions,2WQHG@28221|Deltaproteobacteria,2YV84@29|Myxococcales 28221|Deltaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_2565672_21 243365.CV_3539 1.949e-16 90.0 COG1426@1|root,COG1426@2|Bacteria,1N240@1224|Proteobacteria,2VVFV@28216|Betaproteobacteria,2KRC1@206351|Neisseriales 206351|Neisseriales S Domain of unknown function (DUF4115) - - - ko:K15539 - - - - ko00000 - - - DUF4115,HTH_25 HKD3_k127_2565672_23 234267.Acid_2564 3.984e-11 72.0 2DTVW@1|root,33MW2@2|Bacteria,3Y606@57723|Acidobacteria 57723|Acidobacteria - - - - - - - - - - - - - - - HKD3_k127_2565672_20 204669.Acid345_4380 1.096e-18 101.0 COG0457@1|root,COG2956@1|root,COG0457@2|Bacteria,COG2956@2|Bacteria,3Y89N@57723|Acidobacteria 57723|Acidobacteria G Tetratricopeptide repeat - - - - - - - - - - - - TPR_16,TPR_19,TPR_8 HKD3_k127_2565672_11 1042375.AFPL01000031_gene747 2.559e-47 182.0 COG0164@1|root,COG0164@2|Bacteria,1RA65@1224|Proteobacteria,1RQ4B@1236|Gammaproteobacteria,466FV@72275|Alteromonadaceae 1236|Gammaproteobacteria L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids rnhB GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 ko:K03470 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - RNase_HII HKD3_k127_2565672_14 335543.Sfum_3002 1.723e-39 149.0 COG0335@1|root,COG0335@2|Bacteria,1RH3A@1224|Proteobacteria,42TMU@68525|delta/epsilon subdivisions,2WQ67@28221|Deltaproteobacteria,2MQIN@213462|Syntrophobacterales 28221|Deltaproteobacteria J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site rplS GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02884 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L19 HKD3_k127_2565672_6 1121423.JONT01000009_gene1470 6.501e-83 285.0 COG0336@1|root,COG0336@2|Bacteria,1TPBV@1239|Firmicutes,247JF@186801|Clostridia,260JP@186807|Peptococcaceae 186801|Clostridia J Belongs to the RNA methyltransferase TrmD family trmD - 2.1.1.228 ko:K00554 - - R00597 RC00003,RC00334 ko00000,ko01000,ko03016 - - - tRNA_m1G_MT HKD3_k127_2565672_17 1132441.KI519454_gene1896 7.481e-26 113.0 COG0806@1|root,COG0806@2|Bacteria,2GK4I@201174|Actinobacteria,1W99H@1268|Micrococcaceae 201174|Actinobacteria J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes rimM GO:0008150,GO:0040007 - ko:K02860 - - - - ko00000,ko03009 - - - PRC,RimM HKD3_k127_2565672_22 411467.BACCAP_02089 9.49e-13 75.0 COG1837@1|root,COG1837@2|Bacteria,1VEG7@1239|Firmicutes,24QKN@186801|Clostridia,269B5@186813|unclassified Clostridiales 186801|Clostridia S KH domain ylqC - - ko:K06960 - - - - ko00000 - - - KH_4 HKD3_k127_2565672_18 479434.Sthe_1866 7.397e-23 100.0 COG0228@1|root,COG0228@2|Bacteria,2G7A3@200795|Chloroflexi,27YHM@189775|Thermomicrobia 189775|Thermomicrobia J Belongs to the bacterial ribosomal protein bS16 family rpsP - - ko:K02959 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011,ko03029 - - - Ribosomal_S16 HKD3_k127_2565672_1 867903.ThesuDRAFT_00298 1.026e-153 499.0 COG0541@1|root,COG0541@2|Bacteria,1TP06@1239|Firmicutes,248EU@186801|Clostridia,3WCDI@538999|Clostridiales incertae sedis 186801|Clostridia U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY ffh - 3.6.5.4 ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko01000,ko02044 3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9 - - SRP54,SRP54_N,SRP_SPB HKD3_k127_2565672_0 635013.TherJR_1781 2.976e-168 539.0 COG0108@1|root,COG0807@1|root,COG0108@2|Bacteria,COG0807@2|Bacteria,1TPH9@1239|Firmicutes,248B0@186801|Clostridia,260I8@186807|Peptococcaceae 186801|Clostridia H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate ribBA - 3.5.4.25,4.1.99.12 ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 M00125,M00840 R00425,R07281 RC00293,RC01792,RC01815,RC02504 ko00000,ko00001,ko00002,ko01000 - - iHN637.CLJU_RS10830 DHBP_synthase,GTP_cyclohydro2 HKD3_k127_2565672_12 1410665.JNKR01000003_gene1981 2.224e-42 166.0 COG0307@1|root,COG0307@2|Bacteria,1V1EP@1239|Firmicutes,4H4M4@909932|Negativicutes 909932|Negativicutes H riboflavin synthase, alpha ribE - 2.5.1.9 ko:K00793 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R00066 RC00958,RC00960 ko00000,ko00001,ko00002,ko01000 - - - Lum_binding HKD3_k127_2565672_7 562970.Btus_1826 2.278e-81 287.0 COG0117@1|root,COG1985@1|root,COG0117@2|Bacteria,COG1985@2|Bacteria,1TP4F@1239|Firmicutes,4HBNA@91061|Bacilli,277ZF@186823|Alicyclobacillaceae 91061|Bacilli H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate ribD - 1.1.1.193,3.5.4.26 ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 M00125 R03458,R03459 RC00204,RC00933 ko00000,ko00001,ko00002,ko01000 - - - RibD_C,dCMP_cyt_deam_1 HKD3_k127_2565672_4 1121468.AUBR01000030_gene1228 7.458e-90 305.0 COG0552@1|root,COG0552@2|Bacteria,1TPRI@1239|Firmicutes,247JD@186801|Clostridia,42ENW@68295|Thermoanaerobacterales 186801|Clostridia U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) ftsY - - ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2,3.A.5.7 - - SRP54,SRP54_N HKD3_k127_2565672_3 1382359.JIAL01000001_gene2790 2.546e-99 334.0 COG0240@1|root,COG0240@2|Bacteria,3Y3ZH@57723|Acidobacteria,2JINS@204432|Acidobacteriia 204432|Acidobacteriia I Glycerol-3-phosphate dehydrogenase gpsA - 1.1.1.94 ko:K00057 ko00564,ko01110,map00564,map01110 - R00842,R00844 RC00029 ko00000,ko00001,ko01000 - - - NAD_Gly3P_dh_C,NAD_Gly3P_dh_N HKD3_k127_2565672_19 290397.Adeh_3960 4.984e-22 108.0 COG1514@1|root,COG1514@2|Bacteria,1RDB2@1224|Proteobacteria,42TMM@68525|delta/epsilon subdivisions,2WQ6S@28221|Deltaproteobacteria,2YVZ3@29|Myxococcales 28221|Deltaproteobacteria J Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester - - 3.1.4.58 ko:K01975 - - - - ko00000,ko01000,ko03016 - - - LigT_PEase HKD3_k127_2565672_5 1267535.KB906767_gene1017 1.056e-88 322.0 COG1058@1|root,COG1546@1|root,COG1058@2|Bacteria,COG1546@2|Bacteria,3Y466@57723|Acidobacteria,2JHTM@204432|Acidobacteriia 204432|Acidobacteriia S Belongs to the CinA family - - 3.5.1.42 ko:K03742 ko00760,map00760 - R02322 RC00100 ko00000,ko00001,ko01000 - - - CinA,MoCF_biosynth HKD3_k127_2565672_15 404589.Anae109_3744 9.457e-31 127.0 COG1267@1|root,COG1267@2|Bacteria,1MZJA@1224|Proteobacteria,42U6G@68525|delta/epsilon subdivisions,2WQDR@28221|Deltaproteobacteria 28221|Deltaproteobacteria I Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) pgpA - 3.1.3.27 ko:K01095 ko00564,ko01100,map00564,map01100 - R02029 RC00017 ko00000,ko00001,ko01000 - - iAF987.Gmet_0195 PgpA HKD3_k127_2565672_24 1232410.KI421412_gene461 7.232e-06 57.0 COG1714@1|root,COG1714@2|Bacteria,1NHVN@1224|Proteobacteria,42XXU@68525|delta/epsilon subdivisions,2WT22@28221|Deltaproteobacteria,43SSP@69541|Desulfuromonadales 28221|Deltaproteobacteria S RDD family - - - - - - - - - - - - RDD HKD3_k127_2565672_8 269799.Gmet_0776 2.381e-81 277.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2WJ88@28221|Deltaproteobacteria,43TKB@69541|Desulfuromonadales 28221|Deltaproteobacteria T response regulator ntrX - - ko:K13599 ko02020,map02020 M00498 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat HKD3_k127_2573932_0 1047013.AQSP01000108_gene2058 6.634e-208 679.0 COG2091@1|root,COG2091@2|Bacteria,2NQGR@2323|unclassified Bacteria 2|Bacteria H lysine biosynthetic process via aminoadipic acid - - - - - - - - - - - - CBM9_1 HKD3_k127_2573932_1 925409.KI911562_gene658 1.386e-172 554.0 COG0673@1|root,COG0673@2|Bacteria,4NF4Q@976|Bacteroidetes,1IWFU@117747|Sphingobacteriia 976|Bacteroidetes S Oxidoreductase domain protein - - - - - - - - - - - - GFO_IDH_MocA HKD3_k127_2573932_2 880073.Calab_2482 2.321e-115 387.0 COG0534@1|root,COG0534@2|Bacteria,2NPFE@2323|unclassified Bacteria 2|Bacteria V Mate efflux family protein - - - - - - - - - - - - ANKH,MatE HKD3_k127_2573932_3 1150600.ADIARSV_0039 4.065e-84 301.0 COG1409@1|root,COG1409@2|Bacteria,4NG8Q@976|Bacteroidetes,1IPS0@117747|Sphingobacteriia 976|Bacteroidetes S Calcineurin-like phosphoesterase - - - - - - - - - - - - Metallophos,Pur_ac_phosph_N HKD3_k127_2573932_4 1443665.JACA01000024_gene3330 2.838e-82 297.0 COG1680@1|root,COG1680@2|Bacteria,4NI1Z@976|Bacteroidetes,1HYQF@117743|Flavobacteriia,2YGQ6@290174|Aquimarina 976|Bacteroidetes V Beta-lactamase - - - - - - - - - - - - Beta-lactamase,DUF3471,SusF_SusE HKD3_k127_2599109_0 1047013.AQSP01000124_gene2676 2.383e-90 327.0 COG4796@1|root,COG4796@2|Bacteria,2NPEQ@2323|unclassified Bacteria 2|Bacteria U Secretin and TonB N terminus short domain pilQ - - ko:K02666 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - AMIN,STN,Secretin,Secretin_N HKD3_k127_2608014_2 234267.Acid_3199 2.273e-114 385.0 COG4772@1|root,COG4772@2|Bacteria,3Y9AD@57723|Acidobacteria 57723|Acidobacteria P TonB dependent receptor - - - - - - - - - - - - CarboxypepD_reg,TonB_dep_Rec HKD3_k127_2608014_8 1051632.TPY_1737 4.08e-27 125.0 COG0665@1|root,COG0665@2|Bacteria,1TR1R@1239|Firmicutes 1239|Firmicutes CE FAD dependent oxidoreductase puuB - - ko:K09471 ko00330,ko01100,map00330,map01100 M00136 R07415 RC00062 ko00000,ko00001,ko00002,ko01000 - - - DAO HKD3_k127_2608014_5 204669.Acid345_4207 1.029e-66 235.0 COG4912@1|root,COG4912@2|Bacteria,3Y5U2@57723|Acidobacteria,2JNWU@204432|Acidobacteriia 204432|Acidobacteriia L DNA alkylation repair enzyme - - - - - - - - - - - - DNA_alkylation HKD3_k127_2608014_3 309801.trd_A0706 1.912e-98 332.0 COG0449@1|root,COG0449@2|Bacteria,2G5V6@200795|Chloroflexi,27XY2@189775|Thermomicrobia 189775|Thermomicrobia M SIS domain - - 2.6.1.16 ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 - R00768 RC00010,RC00163,RC02752 ko00000,ko00001,ko01000,ko01002 - - - SIS HKD3_k127_2608014_7 1174504.AJTN02000230_gene1275 2.368e-37 156.0 COG4632@1|root,COG4632@2|Bacteria,1UV25@1239|Firmicutes,4I5JA@91061|Bacilli,1ZEFI@1386|Bacillus 91061|Bacilli G Phosphodiester glycosidase - - - - - - - - - - - - NAGPA,SPOR HKD3_k127_2608014_6 1122604.JONR01000025_gene4602 7.733e-41 172.0 COG0457@1|root,COG3710@1|root,COG5616@1|root,COG0457@2|Bacteria,COG3710@2|Bacteria,COG5616@2|Bacteria,1MUMZ@1224|Proteobacteria,1SHX7@1236|Gammaproteobacteria,1X4MN@135614|Xanthomonadales 135614|Xanthomonadales K Transcriptional regulatory protein, C terminal - - - - - - - - - - - - Trans_reg_C HKD3_k127_2608014_1 357808.RoseRS_1116 1.275e-129 426.0 COG0530@1|root,COG0530@2|Bacteria,2G6GV@200795|Chloroflexi,376V8@32061|Chloroflexia 32061|Chloroflexia P PFAM sodium calcium exchanger membrane region - - - ko:K07301 - - - - ko00000,ko02000 2.A.19.5 - - Na_Ca_ex HKD3_k127_2608014_4 649747.HMPREF0083_04814 1.541e-95 341.0 COG1807@1|root,COG1807@2|Bacteria,1TTJ7@1239|Firmicutes 1239|Firmicutes M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - ko:K13687 - - - - ko00000,ko01000,ko01003 - GT89 - - HKD3_k127_2608014_0 886293.Sinac_4683 3.857e-266 835.0 COG0457@1|root,COG0457@2|Bacteria 886293.Sinac_4683|- S peptidyl-tyrosine sulfation - - 3.4.14.4 ko:K01277 - - - - ko00000,ko01000,ko01002 - - - - HKD3_k127_2608014_9 267608.RSc0201 3.35e-12 67.0 COG1236@1|root,COG1236@2|Bacteria,1MUDD@1224|Proteobacteria,2VHFX@28216|Betaproteobacteria,1K32K@119060|Burkholderiaceae 28216|Betaproteobacteria J RNA-metabolising metallo-beta-lactamase - - - ko:K07576 - - - - ko00000 - - - Beta-Casp,Lactamase_B,RMMBL HKD3_k127_2608987_0 1267535.KB906767_gene5100 4.428e-120 389.0 COG1166@1|root,COG1166@2|Bacteria,3Y449@57723|Acidobacteria 57723|Acidobacteria E Pyridoxal-dependent decarboxylase, pyridoxal binding domain - - 4.1.1.19 ko:K01585 ko00330,ko01100,map00330,map01100 M00133 R00566 RC00299 ko00000,ko00001,ko00002,ko01000 - - - Orn_Arg_deC_N HKD3_k127_2608987_2 379066.GAU_3256 8.407e-70 252.0 COG0577@1|root,COG0577@2|Bacteria,1ZTMQ@142182|Gemmatimonadetes 142182|Gemmatimonadetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD HKD3_k127_2608987_1 700598.Niako_7010 2.999e-81 289.0 COG2234@1|root,COG2234@2|Bacteria,4NIAY@976|Bacteroidetes,1IVXK@117747|Sphingobacteriia 976|Bacteroidetes S Peptidase family M28 - - - - - - - - - - - - Peptidase_M28 HKD3_k127_2622654_0 269799.Gmet_1653 4.863e-126 408.0 COG0588@1|root,COG0588@2|Bacteria,1MUVE@1224|Proteobacteria,42PJM@68525|delta/epsilon subdivisions,2WKJN@28221|Deltaproteobacteria 28221|Deltaproteobacteria G Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily gpmA GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 - - - His_Phos_1 HKD3_k127_2622654_1 296587.XP_002499643.1 3.042e-05 50.0 COG0042@1|root,KOG2333@2759|Eukaryota,37YV0@33090|Viridiplantae,34K64@3041|Chlorophyta 3041|Chlorophyta J Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs - - 1.3.1.89 ko:K05544 - - - - ko00000,ko01000,ko03016 - - - Dus HKD3_k127_2622660_1 269799.Gmet_1653 5.063e-121 391.0 COG0588@1|root,COG0588@2|Bacteria,1MUVE@1224|Proteobacteria,42PJM@68525|delta/epsilon subdivisions,2WKJN@28221|Deltaproteobacteria 28221|Deltaproteobacteria G Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily gpmA GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 - - - His_Phos_1 HKD3_k127_2622660_4 296587.XP_002499643.1 9.175e-73 258.0 COG0042@1|root,KOG2333@2759|Eukaryota,37YV0@33090|Viridiplantae,34K64@3041|Chlorophyta 3041|Chlorophyta J Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs - - 1.3.1.89 ko:K05544 - - - - ko00000,ko01000,ko03016 - - - Dus HKD3_k127_2622660_5 1278073.MYSTI_04273 5.279e-26 126.0 2E4EC@1|root,32Z9K@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - OMP_b-brl HKD3_k127_2622660_3 204669.Acid345_1727 1.444e-74 259.0 2CK1E@1|root,33T2R@2|Bacteria,3Y7DJ@57723|Acidobacteria,2JM38@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - HKD3_k127_2622660_2 1340493.JNIF01000004_gene180 1.198e-100 348.0 COG0668@1|root,COG0668@2|Bacteria,3Y6BI@57723|Acidobacteria 57723|Acidobacteria M Mechanosensitive ion channel - - - ko:K16052 - - - - ko00000,ko02000 1.A.23.4 - - MS_channel HKD3_k127_2622660_6 352165.HMPREF7215_0342 1.745e-09 70.0 COG4775@1|root,COG4775@2|Bacteria,3T9Q7@508458|Synergistetes 508458|Synergistetes M Surface antigen variable number repeat - - - ko:K07277 - - - - ko00000,ko02000,ko03029 1.B.33 - - Bac_surface_Ag,POTRA HKD3_k127_2622660_0 926550.CLDAP_23540 2.242e-311 981.0 COG0160@1|root,COG0739@1|root,COG2334@1|root,COG0160@2|Bacteria,COG0739@2|Bacteria,COG2334@2|Bacteria 2|Bacteria S homoserine kinase activity gabT - 2.6.1.19,2.6.1.22 ko:K00823,ko:K07250 ko00250,ko00280,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00280,map00410,map00640,map00650,map01100,map01120 M00027 R00908,R01648,R04188 RC00006,RC00062,RC00160 ko00000,ko00001,ko00002,ko01000,ko01007 - - - APH,Aminotran_3,Peptidase_M23 HKD3_k127_2623760_5 383372.Rcas_2618 5.415e-07 51.0 COG2115@1|root,COG2115@2|Bacteria,2G688@200795|Chloroflexi,376KP@32061|Chloroflexia 32061|Chloroflexia G PFAM Xylose isomerase domain protein TIM barrel xylA - 5.3.1.5 ko:K01805 ko00040,ko00051,ko01100,map00040,map00051,map01100 - R00878,R01432 RC00376,RC00516 ko00000,ko00001,ko01000 - - - AP_endonuc_2 HKD3_k127_2623760_0 382464.ABSI01000011_gene3107 0.0 1044.0 COG0726@1|root,COG0726@2|Bacteria,46UEB@74201|Verrucomicrobia 74201|Verrucomicrobia G Glycosyl hydrolase family 9 - - - - - - - - - - - - CelD_N,Glyco_hydro_9 HKD3_k127_2623760_1 278963.ATWD01000001_gene1649 3.458e-228 715.0 COG2723@1|root,COG2723@2|Bacteria,3Y484@57723|Acidobacteria,2JIKZ@204432|Acidobacteriia 204432|Acidobacteriia G PFAM glycoside hydrolase family 1 - - 3.2.1.21 ko:K05350 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - - - Glyco_hydro_1 HKD3_k127_2623760_3 452637.Oter_0567 1.111e-43 175.0 2F96P@1|root,341I4@2|Bacteria,46VSX@74201|Verrucomicrobia 74201|Verrucomicrobia - - - - - - - - - - - - - - - HKD3_k127_2623760_2 1250232.JQNJ01000001_gene3426 4.058e-193 620.0 arCOG07336@1|root,2Z8ST@2|Bacteria,4NIV5@976|Bacteroidetes 976|Bacteroidetes - - - - - - - - - - - - - - - HKD3_k127_2623760_4 742726.HMPREF9448_02737 2.11e-26 112.0 COG1397@1|root,COG1397@2|Bacteria,4NG36@976|Bacteroidetes,2FNB7@200643|Bacteroidia,22X71@171551|Porphyromonadaceae 976|Bacteroidetes O ADP-ribosylglycohydrolase - - - - - - - - - - - - ADP_ribosyl_GH HKD3_k127_2626650_6 903818.KI912268_gene2455 2.127e-13 70.0 COG1418@1|root,COG1418@2|Bacteria 2|Bacteria S mRNA catabolic process rny - - ko:K18682 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - DUF3552,HD,KH_1 HKD3_k127_2626650_3 635013.TherJR_0727 2.16e-57 212.0 COG0611@1|root,COG0611@2|Bacteria,1V0SM@1239|Firmicutes,24J04@186801|Clostridia,262KV@186807|Peptococcaceae 186801|Clostridia H Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 thiL - 2.7.4.16 ko:K00946 ko00730,ko01100,map00730,map01100 M00127 R00617 RC00002 ko00000,ko00001,ko00002,ko01000 - - - AIRS,AIRS_C HKD3_k127_2626650_7 330214.NIDE3048 5.07e-11 75.0 COG3216@1|root,COG3216@2|Bacteria,3J1DC@40117|Nitrospirae 40117|Nitrospirae S Uncharacterized protein conserved in bacteria (DUF2062) - - - ko:K09928 - - - - ko00000 - - - DUF2062 HKD3_k127_2626650_8 264732.Moth_0050 2.999e-09 68.0 COG3584@1|root,COG3584@2|Bacteria,1TTIK@1239|Firmicutes,24997@186801|Clostridia,42IFK@68295|Thermoanaerobacterales 186801|Clostridia S 3D domain - - - - - - - - - - - - 3D,DUF348,G5 HKD3_k127_2626650_10 1540257.JQMW01000009_gene3117 0.0002502 51.0 COG3708@1|root,COG3708@2|Bacteria,1VGHV@1239|Firmicutes 1239|Firmicutes K Bacterial transcription activator, effector binding domain - - - - - - - - - - - - Cass2,GyrI-like HKD3_k127_2626650_0 1499967.BAYZ01000029_gene1223 5.257e-150 506.0 COG1530@1|root,COG1530@2|Bacteria,2NNQR@2323|unclassified Bacteria 2|Bacteria J Ribonuclease E/G family rng GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008996,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360 3.1.26.12 ko:K08300,ko:K08301 ko03018,map03018 M00394 - - ko00000,ko00001,ko00002,ko01000,ko03009,ko03019 - - - RNase_E_G,S1 HKD3_k127_2626650_2 243231.GSU2078 8.122e-85 293.0 COG0772@1|root,COG0772@2|Bacteria,1MUK3@1224|Proteobacteria,42MQT@68525|delta/epsilon subdivisions,2WIP1@28221|Deltaproteobacteria,43TZM@69541|Desulfuromonadales 28221|Deltaproteobacteria M Peptidoglycan polymerase that is essential for cell wall elongation mrdB - - ko:K05837 - - - - ko00000,ko03036 - - - FTSW_RODA_SPOVE HKD3_k127_2626650_1 1382359.JIAL01000001_gene1432 6.038e-126 433.0 COG0768@1|root,COG0768@2|Bacteria,3Y3MX@57723|Acidobacteria,2JHRD@204432|Acidobacteriia 204432|Acidobacteriia M Penicillin-binding protein, dimerisation domain - - 3.4.16.4 ko:K05515 ko00550,ko01501,map00550,map01501 - - - ko00000,ko00001,ko01000,ko01011 - - - PBP_dimer,Transpeptidase HKD3_k127_2626650_9 1123288.SOV_1c08210 0.0002332 50.0 COG2891@1|root,COG2891@2|Bacteria,1V1EJ@1239|Firmicutes,4H4Q7@909932|Negativicutes 909932|Negativicutes M rod shape-determining protein MreD mreD - - ko:K03571 - - - - ko00000,ko03036 9.B.157.1 - - MreD HKD3_k127_2626650_4 671143.DAMO_3132 1.925e-29 128.0 COG1792@1|root,COG1792@2|Bacteria,2NPNX@2323|unclassified Bacteria 2|Bacteria M Cell shape-determining protein MreC mreC GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007163,GO:0008150,GO:0008360,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0030428,GO:0031224,GO:0031226,GO:0042546,GO:0043621,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071554,GO:0071840,GO:0071944,GO:0071963 - ko:K03570 - - - - ko00000,ko03036 9.B.157.1 - - MreC HKD3_k127_2626650_5 278963.ATWD01000001_gene2116 6.813e-28 113.0 COG1077@1|root,COG1077@2|Bacteria,3Y3VC@57723|Acidobacteria,2JHQ2@204432|Acidobacteriia 204432|Acidobacteriia D cell shape determining protein MreB - - - ko:K03569 - - - - ko00000,ko02048,ko03036,ko04812 1.A.33.1,9.B.157.1 - - MreB_Mbl HKD3_k127_263595_1 861299.J421_5653 2.91e-147 482.0 COG0673@1|root,COG0673@2|Bacteria 2|Bacteria S inositol 2-dehydrogenase activity - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C HKD3_k127_263595_0 1408473.JHXO01000001_gene2487 2.03e-153 498.0 COG0673@1|root,COG0673@2|Bacteria,4NEN5@976|Bacteroidetes,2FQ0Q@200643|Bacteroidia 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA HKD3_k127_2709185_19 765913.ThidrDRAFT_3025 1.646e-29 126.0 COG3174@1|root,COG3174@2|Bacteria,1NDBI@1224|Proteobacteria,1RRGY@1236|Gammaproteobacteria,1WVVW@135613|Chromatiales 135613|Chromatiales S Domain of unknown function (DUF4010) - - - - - - - - - - - - DUF4010,MgtC HKD3_k127_2709185_11 867903.ThesuDRAFT_00911 1.248e-85 291.0 COG1540@1|root,COG1540@2|Bacteria,1TR8X@1239|Firmicutes,249GD@186801|Clostridia 186801|Clostridia S Belongs to the UPF0271 (lamB) family - - - ko:K07160 - - - - ko00000 - - - LamB_YcsF HKD3_k127_2709185_14 1121468.AUBR01000007_gene239 2.456e-68 247.0 COG2049@1|root,COG2049@2|Bacteria,1TTBZ@1239|Firmicutes,24A35@186801|Clostridia,42EXX@68295|Thermoanaerobacterales 186801|Clostridia E Allophanate hydrolase subunit 1 kipI - - ko:K06351 - - - - ko00000 - - - CT_C_D HKD3_k127_2709185_10 867903.ThesuDRAFT_00910 3.13e-89 315.0 COG1984@1|root,COG1984@2|Bacteria,1TR6U@1239|Firmicutes,2485K@186801|Clostridia 186801|Clostridia E Allophanate hydrolase subunit 2 kipA - - ko:K06350 - - - - ko00000 - - - CT_A_B HKD3_k127_2709185_3 861299.J421_1358 5.489e-178 568.0 COG0477@1|root,COG2814@2|Bacteria 2|Bacteria EGP Major facilitator Superfamily - - - - - - - - - - - - MFS_1,Sugar_tr HKD3_k127_2709185_6 644282.Deba_0629 5.886e-131 436.0 COG1696@1|root,COG1696@2|Bacteria,1MUXN@1224|Proteobacteria,42MIR@68525|delta/epsilon subdivisions,2WMEK@28221|Deltaproteobacteria 28221|Deltaproteobacteria M membrane protein involved in D-alanine export algI - - ko:K19294 - - - - ko00000 - - - MBOAT HKD3_k127_2709185_20 497964.CfE428DRAFT_4451 7.88e-29 128.0 2C16S@1|root,2ZHJB@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_2709185_4 1047013.AQSP01000142_gene190 8.084e-149 492.0 COG0591@1|root,COG0591@2|Bacteria 2|Bacteria E symporter activity putP_2 - - ko:K03307,ko:K11928 - - - - ko00000,ko02000 2.A.21,2.A.21.2 - - SSF HKD3_k127_2709185_18 204669.Acid345_3964 9.496e-30 120.0 COG2924@1|root,COG2924@2|Bacteria,3Y4ZS@57723|Acidobacteria,2JJEE@204432|Acidobacteriia 204432|Acidobacteriia CO Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - - - - - - - - - - Iron_traffic HKD3_k127_2709185_5 292459.STH518 3.23e-141 473.0 COG0243@1|root,COG0243@2|Bacteria,1TPZG@1239|Firmicutes,247JV@186801|Clostridia 186801|Clostridia C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - - - - - - - - - - Molybdop_Fe4S4,Molybdopterin,Molydop_binding HKD3_k127_2709185_13 204669.Acid345_3323 1.043e-69 253.0 COG0845@1|root,COG0845@2|Bacteria,3Y2XR@57723|Acidobacteria,2JHTV@204432|Acidobacteriia 204432|Acidobacteriia M Efflux transporter, RND family, MFP subunit - - - ko:K02005 - - - - ko00000 - - - HlyD_D23 HKD3_k127_2709185_12 234267.Acid_5982 6.447e-75 269.0 COG0577@1|root,COG0577@2|Bacteria,3Y2MV@57723|Acidobacteria 57723|Acidobacteria V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD HKD3_k127_2709185_8 234267.Acid_5981 1.758e-97 333.0 COG0577@1|root,COG0577@2|Bacteria,3Y3XI@57723|Acidobacteria 57723|Acidobacteria V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD HKD3_k127_2709185_23 714943.Mucpa_2004 0.0003696 50.0 COG4772@1|root,COG4772@2|Bacteria,4PKRQ@976|Bacteroidetes,1IVJN@117747|Sphingobacteriia 976|Bacteroidetes P Outer membrane protein beta-barrel family - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3 HKD3_k127_2709185_17 246197.MXAN_0453 2.497e-31 131.0 COG3871@1|root,COG3871@2|Bacteria,1RF7K@1224|Proteobacteria,431CF@68525|delta/epsilon subdivisions,2WX0W@28221|Deltaproteobacteria,2YYTY@29|Myxococcales 28221|Deltaproteobacteria S Pyridoxamine 5'-phosphate oxidase like - - - - - - - - - - - - Pyrid_ox_like HKD3_k127_2709185_2 204669.Acid345_3443 3.087e-207 658.0 COG1574@1|root,COG1574@2|Bacteria,3Y2UF@57723|Acidobacteria,2JIRH@204432|Acidobacteriia 204432|Acidobacteriia S Amidohydrolase family - - - - - - - - - - - - Amidohydro_3 HKD3_k127_2709185_15 1131813.AQVT01000001_gene2403 1.168e-47 186.0 COG0350@1|root,COG0350@2|Bacteria,1N2YQ@1224|Proteobacteria,2TRRN@28211|Alphaproteobacteria,1JURW@119045|Methylobacteriaceae 28211|Alphaproteobacteria L 6-O-methylguanine DNA methyltransferase, DNA binding domain ogt - 2.1.1.63 ko:K00567 - - - - ko00000,ko01000,ko03400 - - - DNA_binding_1,Methyltransf_1N HKD3_k127_2709185_16 1235803.C825_03673 6.273e-45 179.0 COG1597@1|root,COG1597@2|Bacteria,4NJWB@976|Bacteroidetes,2FMGJ@200643|Bacteroidia,22WEB@171551|Porphyromonadaceae 976|Bacteroidetes I Lipid kinase - - - - - - - - - - - - DAGK_cat HKD3_k127_2709185_9 187272.Mlg_2775 9.235e-94 338.0 COG0389@1|root,COG0389@2|Bacteria,1MUUH@1224|Proteobacteria,1RMFM@1236|Gammaproteobacteria,1WXWQ@135613|Chromatiales 135613|Chromatiales L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII dinB - 2.7.7.7 ko:K02346 - - - - ko00000,ko01000,ko03400 - - - IMS,IMS_C,IMS_HHH HKD3_k127_2709185_1 861299.J421_1457 2.894e-246 774.0 COG2274@1|root,COG2274@2|Bacteria,1ZSX6@142182|Gemmatimonadetes 142182|Gemmatimonadetes V ABC transporter transmembrane region - - - ko:K11085 ko02010,map02010 - - - ko00000,ko00001,ko01000,ko02000 3.A.1.106 - - ABC_membrane,ABC_tran HKD3_k127_2709185_21 1121123.AUAO01000005_gene1831 1.318e-24 108.0 COG0399@1|root,COG0399@2|Bacteria,1N0QW@1224|Proteobacteria,2TX9R@28211|Alphaproteobacteria 28211|Alphaproteobacteria M 23S rRNA-intervening sequence protein - - - - - - - - - - - - 23S_rRNA_IVP HKD3_k127_2709185_0 926569.ANT_24980 2.304e-280 886.0 COG0072@1|root,COG0073@1|root,COG0072@2|Bacteria,COG0073@2|Bacteria,2G5QR@200795|Chloroflexi 200795|Chloroflexi J phenylalanyl-tRNA synthetase beta subunit pheT - 6.1.1.20 ko:K01890 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - B3_4,B5,FDX-ACB,tRNA_bind HKD3_k127_2709185_7 926569.ANT_24970 3.163e-123 400.0 COG0016@1|root,COG0016@2|Bacteria,2G5T1@200795|Chloroflexi 200795|Chloroflexi J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily pheS - 6.1.1.20 ko:K01889 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Phe_tRNA-synt_N,tRNA-synt_2d HKD3_k127_2709185_22 926569.ANT_24970 2.265e-07 54.0 COG0016@1|root,COG0016@2|Bacteria,2G5T1@200795|Chloroflexi 200795|Chloroflexi J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily pheS - 6.1.1.20 ko:K01889 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Phe_tRNA-synt_N,tRNA-synt_2d HKD3_k127_2713217_4 886379.AEWI01000013_gene2112 1.388e-57 214.0 COG4799@1|root,COG4799@2|Bacteria,4NEMJ@976|Bacteroidetes,2FM4G@200643|Bacteroidia,3XJSP@558415|Marinilabiliaceae 976|Bacteroidetes I Carboxyl transferase domain mmdA - - - - - - - - - - - Carboxyl_trans HKD3_k127_2713217_3 1279038.KB907348_gene3100 1.273e-91 318.0 COG0790@1|root,COG0790@2|Bacteria,1MWPA@1224|Proteobacteria,2TR2B@28211|Alphaproteobacteria,2JQWU@204441|Rhodospirillales 204441|Rhodospirillales O COG0790 FOG TPR repeat, SEL1 subfamily - - - ko:K07126 - - - - ko00000 - - - Sel1 HKD3_k127_2713217_1 1007104.SUS17_3960 1.724e-124 410.0 COG4409@1|root,COG4409@2|Bacteria,1QWFX@1224|Proteobacteria,2TY4Q@28211|Alphaproteobacteria,2K211@204457|Sphingomonadales 204457|Sphingomonadales G BNR repeat-like domain - - - - - - - - - - - - BNR_2 HKD3_k127_2713217_2 1267535.KB906767_gene4792 1.048e-112 374.0 COG2120@1|root,COG2120@2|Bacteria,3Y7FS@57723|Acidobacteria 57723|Acidobacteria S GlcNAc-PI de-N-acetylase - - - - - - - - - - - - PIG-L HKD3_k127_2713217_0 861299.J421_6019 4.249e-159 507.0 COG0531@1|root,COG0531@2|Bacteria,1ZSQW@142182|Gemmatimonadetes 2|Bacteria E Amino acid permease frlA GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006040,GO:0006082,GO:0006520,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0009056,GO:0009063,GO:0009987,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0016054,GO:0019752,GO:0022804,GO:0022857,GO:0030389,GO:0030392,GO:0030393,GO:0031224,GO:0031226,GO:0034220,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044425,GO:0044459,GO:0044464,GO:0046348,GO:0046395,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0098656,GO:1901135,GO:1901136,GO:1901281,GO:1901564,GO:1901565,GO:1901575,GO:1902475,GO:1903825,GO:1905039 - ko:K03294,ko:K19540 - - - - ko00000,ko02000 2.A.3.2,2.A.3.8.17 - iAF1260.b3370,iB21_1397.B21_03173,iBWG_1329.BWG_3062,iEC042_1314.EC042_3632,iEC55989_1330.EC55989_3776,iECBD_1354.ECBD_0378,iECB_1328.ECB_03221,iECDH10B_1368.ECDH10B_3546,iECDH1ME8569_1439.ECDH1ME8569_3250,iECD_1391.ECD_03221,iECIAI1_1343.ECIAI1_3509,iECO111_1330.ECO111_4180,iECO26_1355.ECO26_4459,iETEC_1333.ETEC_3621,iEcDH1_1363.EcDH1_0342,iJO1366.b3370,iSSON_1240.SSON_3502,iUMNK88_1353.UMNK88_4136,iY75_1357.Y75_RS20365 AA_permease_2 HKD3_k127_2719142_3 1340493.JNIF01000003_gene2554 9.139e-28 119.0 COG0799@1|root,COG0799@2|Bacteria,3Y5SD@57723|Acidobacteria 57723|Acidobacteria S Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation rsfS - - ko:K09710 - - - - ko00000,ko03009 - - - RsfS HKD3_k127_2719142_2 1131813.AQVT01000001_gene413 2.842e-38 156.0 COG1040@1|root,COG1040@2|Bacteria,1RHAV@1224|Proteobacteria,2TV7G@28211|Alphaproteobacteria,1JTTY@119045|Methylobacteriaceae 28211|Alphaproteobacteria S Competence protein comF - - - - - - - - - - - Pribosyltran HKD3_k127_2719142_4 3656.XP_008454201.1 9.526e-28 121.0 COG0125@1|root,KOG3327@2759|Eukaryota,37JUX@33090|Viridiplantae,3G8A8@35493|Streptophyta,4JDSG@91835|fabids 35493|Streptophyta F Thymidylate - GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0022414,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0034641,GO:0034654,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0050145,GO:0055086,GO:0061458,GO:0070013,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 ko:K00943 ko00240,ko01100,map00240,map01100 M00053 R02094,R02098 RC00002 ko00000,ko00001,ko00002,ko01000 - - - Thymidylate_kin HKD3_k127_2719142_0 1260251.SPISAL_00135 8.724e-107 359.0 COG0019@1|root,COG0019@2|Bacteria,1MUA6@1224|Proteobacteria,1RMI2@1236|Gammaproteobacteria,1WVUW@135613|Chromatiales 135613|Chromatiales E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine lysA - 4.1.1.20 ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R00451 RC00299 ko00000,ko00001,ko00002,ko01000 - - - Orn_Arg_deC_N,Orn_DAP_Arg_deC HKD3_k127_2719142_1 1340493.JNIF01000003_gene1688 6.523e-41 160.0 COG1595@1|root,COG1595@2|Bacteria,3Y4HK@57723|Acidobacteria 57723|Acidobacteria K RNA polymerase sigma factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 HKD3_k127_2719142_6 243233.MCA1686 4.173e-08 65.0 COG1366@1|root,COG1366@2|Bacteria,1MZE8@1224|Proteobacteria,1SBPJ@1236|Gammaproteobacteria,1XGYD@135618|Methylococcales 135618|Methylococcales T STAS domain - - - ko:K04749 - - - - ko00000,ko03021 - - - STAS HKD3_k127_2719142_5 1408433.JHXV01000023_gene3305 2.296e-20 105.0 COG0535@1|root,COG0535@2|Bacteria,4NGWY@976|Bacteroidetes,1I14P@117743|Flavobacteriia,2PBAQ@246874|Cryomorphaceae 976|Bacteroidetes C Iron-sulfur cluster-binding domain - - - - - - - - - - - - Fer4_12,Radical_SAM,SPASM HKD3_k127_2722735_4 1128421.JAGA01000003_gene3536 4.934e-51 201.0 COG5002@1|root,COG5002@2|Bacteria,2NS5D@2323|unclassified Bacteria 2|Bacteria T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - 2.7.13.3 ko:K02484,ko:K07642 ko02020,map02020 M00450,M00645,M00646,M00648 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HAMP,HATPase_c,HisKA HKD3_k127_2722735_3 309807.SRU_2488 6.667e-60 216.0 COG0745@1|root,COG0745@2|Bacteria,4NIQC@976|Bacteroidetes,1FK2H@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes K Transcriptional regulatory protein, C terminal - - - ko:K07667 ko02020,ko02024,map02020,map02024 M00454 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C HKD3_k127_2722735_1 401053.AciPR4_3533 4.146e-144 501.0 COG1629@1|root,COG4771@2|Bacteria,3Y42A@57723|Acidobacteria,2JIME@204432|Acidobacteriia 204432|Acidobacteriia P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg,TonB_dep_Rec HKD3_k127_2722735_0 639030.JHVA01000001_gene1597 3.853e-186 605.0 COG2304@1|root,COG2304@2|Bacteria,3Y3DR@57723|Acidobacteria,2JHJT@204432|Acidobacteriia 204432|Acidobacteriia S TIGRFAM VWFA-related Acidobacterial domain - - - - - - - - - - - - - HKD3_k127_2722735_2 204669.Acid345_1973 1.377e-81 275.0 COG0353@1|root,COG0353@2|Bacteria,3Y31E@57723|Acidobacteria,2JHQM@204432|Acidobacteriia 204432|Acidobacteriia L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO recR - - ko:K06187 ko03440,map03440 - - - ko00000,ko00001,ko03400 - - - RecR,Toprim_4 HKD3_k127_2722735_5 1047013.AQSP01000101_gene612 5.213e-19 87.0 COG0718@1|root,COG0718@2|Bacteria,2NPUK@2323|unclassified Bacteria 2|Bacteria S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection ybaB GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 - ko:K06187,ko:K09747 ko03440,map03440 - - - ko00000,ko00001,ko03400 - - - YbaB_DNA_bd HKD3_k127_2765520_0 234267.Acid_5940 3.844e-67 236.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,3Y2PK@57723|Acidobacteria 57723|Acidobacteria KLTU WD40 domain protein beta Propeller - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase HKD3_k127_2765520_2 449447.MAE_21480 3.932e-07 61.0 COG2002@1|root,COG2002@2|Bacteria,1G926@1117|Cyanobacteria 1117|Cyanobacteria K SpoVT AbrB like domain - - - - - - - - - - - - MazE_antitoxin HKD3_k127_2765520_1 118173.KB235914_gene3422 1.078e-49 180.0 COG1487@1|root,COG1487@2|Bacteria,1G66B@1117|Cyanobacteria,1HBVV@1150|Oscillatoriales 1117|Cyanobacteria S PIN domain - - - - - - - - - - - - PIN HKD3_k127_2765520_3 1267534.KB906760_gene1566 1.147e-06 59.0 COG4319@1|root,COG4319@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - DUF4440 HKD3_k127_2766318_6 504472.Slin_6215 2.529e-56 203.0 COG0673@1|root,COG0673@2|Bacteria,4NF96@976|Bacteroidetes,47THD@768503|Cytophagia 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C HKD3_k127_2766318_2 1340493.JNIF01000003_gene3117 1.138e-266 859.0 COG1629@1|root,COG1629@2|Bacteria,3Y2N1@57723|Acidobacteria 57723|Acidobacteria P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg HKD3_k127_2766318_3 382464.ABSI01000020_gene156 2.919e-145 475.0 COG0673@1|root,COG0673@2|Bacteria,46U2Q@74201|Verrucomicrobia,2IV92@203494|Verrucomicrobiae 203494|Verrucomicrobiae S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA HKD3_k127_2766318_4 452637.Oter_1690 1.981e-128 426.0 COG1680@1|root,COG1680@2|Bacteria,46V0A@74201|Verrucomicrobia,3K85Q@414999|Opitutae 414999|Opitutae V beta-lactamase - - - - - - - - - - - - Beta-lactamase HKD3_k127_2766318_8 1379270.AUXF01000003_gene3589 8.31e-16 87.0 COG0457@1|root,COG0457@2|Bacteria,1ZU8N@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Protein of unknown function (DUF2911) - - - - - - - - - - - - DUF2911 HKD3_k127_2766318_1 760192.Halhy_3998 4.58e-294 916.0 COG0405@1|root,COG0405@2|Bacteria,4NG3X@976|Bacteroidetes,1IPXR@117747|Sphingobacteriia 976|Bacteroidetes E Gamma-glutamyltranspeptidase - - 2.3.2.2,3.4.19.13 ko:K00681 ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100 - R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935 RC00064,RC00090,RC00096 ko00000,ko00001,ko01000,ko01002 - - - G_glu_transpept HKD3_k127_2766318_0 1121920.AUAU01000001_gene2303 5.117e-298 932.0 COG1505@1|root,COG1505@2|Bacteria,3Y2UH@57723|Acidobacteria 57723|Acidobacteria E peptidase S9A, prolyl oligopeptidase domain protein beta-propeller - - 3.4.21.26 ko:K01322 ko04614,map04614 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S9,Peptidase_S9_N HKD3_k127_2766318_7 1267534.KB906755_gene3967 1.631e-30 134.0 2AC2T@1|root,311KW@2|Bacteria,3Y4QM@57723|Acidobacteria,2JMHZ@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - HKD3_k127_2766318_5 1232410.KI421418_gene2194 3.32e-100 339.0 COG0705@1|root,COG0705@2|Bacteria,1MYFP@1224|Proteobacteria,42P0V@68525|delta/epsilon subdivisions,2WJGR@28221|Deltaproteobacteria,43S6Y@69541|Desulfuromonadales 28221|Deltaproteobacteria S Rhomboid family - - - ko:K07059 - - - - ko00000 - - - DnaJ_C,Rhomboid HKD3_k127_2790974_0 1267533.KB906735_gene4670 2.063e-159 521.0 COG0383@1|root,COG0383@2|Bacteria 2|Bacteria G mannose metabolic process - - - - - - - - - - - - Alpha-mann_mid,Glyco_hydro_38,Glyco_hydro_38C HKD3_k127_2790974_2 398720.MED217_11084 2.137e-23 105.0 COG0454@1|root,COG0456@2|Bacteria,4PE0E@976|Bacteroidetes,1IEEA@117743|Flavobacteriia,2XK0J@283735|Leeuwenhoekiella 976|Bacteroidetes K FR47-like protein - - - - - - - - - - - - Acetyltransf_1 HKD3_k127_2790974_1 234267.Acid_7231 1.643e-109 362.0 COG3533@1|root,COG3533@2|Bacteria,3Y6B7@57723|Acidobacteria 57723|Acidobacteria S Beta-L-arabinofuranosidase, GH127 - - - ko:K09955 - - - - ko00000 - - - Glyco_hydro_127 HKD3_k127_2794130_1 1247963.JPHU01000003_gene1533 0.0008146 52.0 COG0412@1|root,COG0412@2|Bacteria,1QVG1@1224|Proteobacteria,2TWEQ@28211|Alphaproteobacteria 28211|Alphaproteobacteria Q Dienelactone hydrolase - - - - - - - - - - - - - HKD3_k127_2794130_0 1382359.JIAL01000001_gene2835 1.305e-161 525.0 COG5297@1|root,COG5297@2|Bacteria 2|Bacteria G Belongs to the glycosyl hydrolase family 6 - - - - - - - - - - - - DUF1593 HKD3_k127_2884580_0 1254432.SCE1572_37900 9.24e-139 464.0 COG0493@1|root,COG0493@2|Bacteria,1MU2H@1224|Proteobacteria,42MGY@68525|delta/epsilon subdivisions,2WJHC@28221|Deltaproteobacteria,2YUCU@29|Myxococcales 28221|Deltaproteobacteria E Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - 1.3.1.1 ko:K17722 ko00240,ko00410,ko00770,ko01100,map00240,map00410,map00770,map01100 M00046 R00977,R01414,R11026 RC00072,RC00123 ko00000,ko00001,ko00002,ko01000 - - - Fer4_20,Pyr_redox_2 HKD3_k127_2884580_1 1051632.TPY_1321 1.087e-95 316.0 COG0044@1|root,COG0044@2|Bacteria,1TP8C@1239|Firmicutes,249W6@186801|Clostridia 186801|Clostridia F PFAM amidohydrolase hydA - 3.5.2.2 ko:K01464 ko00240,ko00410,ko00770,ko00983,ko01100,map00240,map00410,map00770,map00983,map01100 M00046 R02269,R03055,R08227 RC00632,RC00680 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Amidohydro_1 HKD3_k127_2886581_1 234267.Acid_7680 1.346e-49 179.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria 2|Bacteria U Involved in the tonB-independent uptake of proteins - - 2.7.11.1 ko:K08884,ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PD40,Pkinase,WD40 HKD3_k127_2886581_0 234267.Acid_5749 2.796e-158 527.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria 2|Bacteria U Involved in the tonB-independent uptake of proteins - - 2.7.11.1 ko:K08884,ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PD40,Pkinase,WD40 HKD3_k127_288958_0 471854.Dfer_3148 3.858e-168 577.0 COG2931@1|root,COG2931@2|Bacteria,4NKIR@976|Bacteroidetes,47S7V@768503|Cytophagia 976|Bacteroidetes Q SMART Integrin alpha beta-propellor repeat protein - - - - - - - - - - - - CHU_C,FG-GAP,HYR,VCBS HKD3_k127_288958_1 234267.Acid_3456 4.745e-94 333.0 COG0747@1|root,COG0747@2|Bacteria,3Y44K@57723|Acidobacteria 57723|Acidobacteria E extracellular solute-binding protein, family 5 - - - ko:K02035 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - SBP_bac_5 HKD3_k127_2889995_4 1047013.AQSP01000118_gene1234 1.029e-73 268.0 COG1538@1|root,COG1538@2|Bacteria,2NP5D@2323|unclassified Bacteria 2|Bacteria MU Outer membrane efflux protein tolC - - ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 1.B.17,2.A.6.2 - - OEP HKD3_k127_2889995_2 485917.Phep_0679 1.096e-78 275.0 COG1940@1|root,COG1940@2|Bacteria,4NHNJ@976|Bacteroidetes,1IUUW@117747|Sphingobacteriia 976|Bacteroidetes GK ROK family - - 2.7.1.2 ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - ROK HKD3_k127_2889995_5 1236514.BAKL01000006_gene774 2.013e-73 261.0 COG0738@1|root,COG0738@2|Bacteria,4NHZ7@976|Bacteroidetes,2FPGQ@200643|Bacteroidia,4AMIG@815|Bacteroidaceae 976|Bacteroidetes G Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - MFS_1,Sugar_tr HKD3_k127_2889995_1 485917.Phep_0681 1.635e-118 415.0 COG4821@1|root,COG4821@2|Bacteria,4NHQW@976|Bacteroidetes,1ITT0@117747|Sphingobacteriia 976|Bacteroidetes S SIS domain - - - - - - - - - - - - SIS_2 HKD3_k127_2889995_7 247490.KSU1_D0287 2.248e-67 239.0 COG1216@1|root,COG1216@2|Bacteria,2IZV9@203682|Planctomycetes 203682|Planctomycetes S Glycosyl transferase, family 2 - - - - - - - - - - - - Glycos_transf_2 HKD3_k127_2889995_3 1125863.JAFN01000001_gene535 1.404e-74 265.0 COG0438@1|root,COG0438@2|Bacteria,1MU9C@1224|Proteobacteria,42R6N@68525|delta/epsilon subdivisions,2WP3W@28221|Deltaproteobacteria 28221|Deltaproteobacteria M PFAM Glycosyl transferase, group 1 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 HKD3_k127_2889995_6 671143.DAMO_3042 5.997e-71 250.0 COG0177@1|root,COG0177@2|Bacteria,2NQYE@2323|unclassified Bacteria 2|Bacteria L Protein of unknown function (DUF2400) nth - 4.2.99.18 ko:K10773 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - DUF2400,EndIII_4Fe-2S,HhH-GPD HKD3_k127_2889995_8 1120985.AUMI01000015_gene1535 4.231e-18 92.0 COG0461@1|root,COG0461@2|Bacteria,1V1BZ@1239|Firmicutes,4H2G4@909932|Negativicutes 909932|Negativicutes F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) pyrE - 2.4.2.10 ko:K00762 ko00240,ko01100,map00240,map01100 M00051 R01870 RC00611 ko00000,ko00001,ko00002,ko01000 - - - Pribosyltran HKD3_k127_2889995_0 370438.PTH_1811 1.19e-132 433.0 COG0044@1|root,COG0044@2|Bacteria,1TPQM@1239|Firmicutes,247V2@186801|Clostridia,260IR@186807|Peptococcaceae 186801|Clostridia F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily pyrC - 3.5.2.3 ko:K01465 ko00240,ko01100,map00240,map01100 M00051 R01993 RC00632 ko00000,ko00001,ko00002,ko01000 - - - Amidohydro_1 HKD3_k127_289027_10 443143.GM18_3375 7.577e-58 222.0 COG2206@1|root,COG2206@2|Bacteria,1MW7F@1224|Proteobacteria,42PHB@68525|delta/epsilon subdivisions,2WMJX@28221|Deltaproteobacteria,43S0A@69541|Desulfuromonadales 28221|Deltaproteobacteria T PFAM metal-dependent phosphohydrolase HD sub domain - - - - - - - - - - - - HD,HD_5,KOW HKD3_k127_289027_13 243231.GSU0286 6.188e-05 56.0 COG1413@1|root,COG1413@2|Bacteria,1NR1B@1224|Proteobacteria,42YUS@68525|delta/epsilon subdivisions,2WUMI@28221|Deltaproteobacteria,43TSX@69541|Desulfuromonadales 28221|Deltaproteobacteria C HEAT repeats - - - - - - - - - - - - HEAT_2,HEAT_PBS HKD3_k127_289027_1 1123508.JH636448_gene7640 1.983e-145 476.0 COG0213@1|root,COG0213@2|Bacteria,2IY57@203682|Planctomycetes 203682|Planctomycetes F PFAM Glycosyl transferase, family - - 2.4.2.2 ko:K00756 ko00240,ko01100,map00240,map01100 - R01570,R01876,R02296,R02484 RC00063 ko00000,ko00001,ko01000 - - - Glycos_trans_3N,Glycos_transf_3,PYNP_C HKD3_k127_289027_2 234267.Acid_5232 5.241e-145 473.0 COG1972@1|root,COG1972@2|Bacteria,3Y2KI@57723|Acidobacteria 57723|Acidobacteria F PFAM Na dependent nucleoside transporter - - - ko:K03317 - - - - ko00000 2.A.41 - - Gate,Nucleos_tra2_C,Nucleos_tra2_N HKD3_k127_289027_7 1340493.JNIF01000004_gene675 9.816e-92 328.0 COG0005@1|root,COG0005@2|Bacteria,3Y2MB@57723|Acidobacteria 57723|Acidobacteria F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate - - 2.4.2.1 ko:K03783 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 - R01561,R01863,R01969,R02147,R02294,R02295,R02297,R02484,R02557,R02748,R08368,R10244 RC00033,RC00063,RC00122 ko00000,ko00001,ko01000 - - - PNP_UDP_1 HKD3_k127_289027_11 1267535.KB906767_gene2360 1.272e-47 175.0 COG0295@1|root,COG0295@2|Bacteria,3Y5GE@57723|Acidobacteria 57723|Acidobacteria F Cytidine and deoxycytidylate deaminase zinc-binding region - - 3.5.4.5 ko:K01489 ko00240,ko00983,ko01100,map00240,map00983,map01100 - R01878,R02485,R08221 RC00074,RC00514 ko00000,ko00001,ko01000 - - - dCMP_cyt_deam_1 HKD3_k127_289027_4 240015.ACP_0311 7.323e-126 411.0 COG0182@1|root,COG0182@2|Bacteria,3Y2TR@57723|Acidobacteria,2JHZX@204432|Acidobacteriia 204432|Acidobacteriia J Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) mtnA - 5.3.1.23 ko:K08963 ko00270,ko01100,map00270,map01100 M00034 R04420 RC01151 ko00000,ko00001,ko00002,ko01000 - - - IF-2B HKD3_k127_289027_6 404589.Anae109_3813 2.186e-97 332.0 COG0533@1|root,COG0533@2|Bacteria,1MU6S@1224|Proteobacteria,42MHX@68525|delta/epsilon subdivisions,2WIKS@28221|Deltaproteobacteria,2YTSN@29|Myxococcales 28221|Deltaproteobacteria J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction tsaD GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 ko:K01409 - - R10648 RC00070,RC00416 ko00000,ko01000,ko03016 - - - Peptidase_M22 HKD3_k127_289027_0 518766.Rmar_1199 8.129e-164 526.0 COG0001@1|root,COG0001@2|Bacteria,4NDXG@976|Bacteroidetes,1FIZB@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes H Aminotransferase class-III hemL - 5.4.3.8 ko:K01845 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R02272 RC00677 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_3 HKD3_k127_289027_5 316274.Haur_3550 4.187e-111 373.0 COG0113@1|root,COG0113@2|Bacteria,2G5QT@200795|Chloroflexi,3756C@32061|Chloroflexia 32061|Chloroflexia H Belongs to the ALAD family - - 4.2.1.24 ko:K01698 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R00036 RC00918,RC01781 ko00000,ko00001,ko00002,ko01000,ko04147 - - - ALAD HKD3_k127_289027_12 404589.Anae109_1376 2.334e-26 119.0 COG1587@1|root,COG1587@2|Bacteria,1QYG8@1224|Proteobacteria,43CCC@68525|delta/epsilon subdivisions,2X7NB@28221|Deltaproteobacteria 28221|Deltaproteobacteria H Uroporphyrinogen-III synthase HemD - - 4.2.1.75 ko:K01719 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R03165 RC01861 ko00000,ko00001,ko00002,ko01000 - - - HEM4 HKD3_k127_289027_9 1123377.AUIV01000006_gene1498 1.848e-76 269.0 COG0181@1|root,COG0181@2|Bacteria,1MU56@1224|Proteobacteria,1RMQ8@1236|Gammaproteobacteria,1X4A7@135614|Xanthomonadales 135614|Xanthomonadales H Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps hemC GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 ko:K01749 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R00084 RC02317 ko00000,ko00001,ko00002,ko01000 - - - Porphobil_deam,Porphobil_deamC HKD3_k127_289027_8 644966.Tmar_1263 4.346e-85 301.0 COG0373@1|root,COG0373@2|Bacteria,1TQN9@1239|Firmicutes,2496M@186801|Clostridia,3WDC1@538999|Clostridiales incertae sedis 186801|Clostridia H Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) hemA - 1.2.1.70 ko:K02492 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R04109 RC00055,RC00149 ko00000,ko00001,ko00002,ko01000 - - - GlutR_N,GlutR_dimer,Shikimate_DH HKD3_k127_289027_3 457398.HMPREF0326_01918 1.315e-137 443.0 COG0247@1|root,COG0247@2|Bacteria,1R7N6@1224|Proteobacteria,42QFE@68525|delta/epsilon subdivisions,2WKFM@28221|Deltaproteobacteria,2MAAJ@213115|Desulfovibrionales 28221|Deltaproteobacteria C 4Fe-4S dicluster domain - - - - - - - - - - - - CCG,Fer4_8 HKD3_k127_2900291_1 1191523.MROS_1690 1.905e-43 162.0 COG0280@1|root,COG0281@1|root,COG0280@2|Bacteria,COG0281@2|Bacteria 2|Bacteria C malic enzyme maeB GO:0003674,GO:0003824,GO:0004470,GO:0004473,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0055114 1.1.1.38,1.1.1.40,2.3.1.8 ko:K00027,ko:K00029,ko:K00625,ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,ko02020,map00430,map00620,map00640,map00680,map00710,map00720,map01100,map01120,map01200,map02020 M00169,M00172,M00357,M00579 R00214,R00216,R00230,R00921 RC00004,RC00105,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_1637 Malic_M,PTA_PTB,malic HKD3_k127_2900291_0 530564.Psta_0783 5.257e-98 329.0 COG3865@1|root,COG3865@2|Bacteria,2IZYS@203682|Planctomycetes 203682|Planctomycetes S 3-demethylubiquinone-9 3-methyltransferase - - - - - - - - - - - - 3-dmu-9_3-mt HKD3_k127_2900291_2 999419.HMPREF1077_03141 4.924e-10 68.0 COG3507@1|root,COG3507@2|Bacteria,4NEIZ@976|Bacteroidetes,2G2NY@200643|Bacteroidia,22WFP@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 43 - - - - - - - - - - - - Glyco_hydro_43 HKD3_k127_290099_12 682795.AciX8_0375 4.657e-10 60.0 COG0481@1|root,COG0481@2|Bacteria,3Y3EX@57723|Acidobacteria,2JI4G@204432|Acidobacteriia 204432|Acidobacteriia M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner lepA - - ko:K03596 ko05134,map05134 - - - ko00000,ko00001 - - - EFG_C,GTP_EFTU,GTP_EFTU_D2,LepA_C HKD3_k127_290099_7 1121405.dsmv_2759 1.145e-62 223.0 COG0681@1|root,COG0681@2|Bacteria,1MXUF@1224|Proteobacteria,42NJE@68525|delta/epsilon subdivisions,2WKMA@28221|Deltaproteobacteria,2MIAI@213118|Desulfobacterales 28221|Deltaproteobacteria U Belongs to the peptidase S26 family lepB - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24,Peptidase_S26 HKD3_k127_290099_0 234267.Acid_5022 8.707e-228 722.0 COG2234@1|root,COG2234@2|Bacteria 2|Bacteria DZ aminopeptidase activity - - - - - - - - - - - - PA,Peptidase_M28 HKD3_k127_290099_3 555079.Toce_1473 2.235e-111 373.0 COG1228@1|root,COG1228@2|Bacteria,1TP2J@1239|Firmicutes,24AGR@186801|Clostridia,42EXG@68295|Thermoanaerobacterales 186801|Clostridia F Belongs to the metallo-dependent hydrolases superfamily. HutI family hutI - 3.5.2.7 ko:K01468 ko00340,ko01100,map00340,map01100 M00045 R02288 RC00683 ko00000,ko00001,ko00002,ko01000 - - - Amidohydro_1,Amidohydro_3 HKD3_k127_290099_11 1297742.A176_04380 1.499e-22 106.0 COG3599@1|root,COG3599@2|Bacteria,1NCAV@1224|Proteobacteria,42UNA@68525|delta/epsilon subdivisions,2WQ1A@28221|Deltaproteobacteria 28221|Deltaproteobacteria D DivIVA protein divIVA - - ko:K04074 - - - - ko00000,ko03036 - - - DivIVA HKD3_k127_290099_8 439235.Dalk_0394 2.645e-58 212.0 COG0325@1|root,COG0325@2|Bacteria,1MWN7@1224|Proteobacteria,42PSG@68525|delta/epsilon subdivisions,2WKYN@28221|Deltaproteobacteria,2MJ9P@213118|Desulfobacterales 28221|Deltaproteobacteria S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis yggS - - ko:K06997 - - - - ko00000 - - - Ala_racemase_N HKD3_k127_290099_10 1340493.JNIF01000003_gene3076 1.572e-26 121.0 COG0457@1|root,COG0457@2|Bacteria,3Y3BD@57723|Acidobacteria 57723|Acidobacteria S Tetratricopeptide repeat - - - - - - - - - - - - CarboxypepD_reg,TPR_11,TPR_16,TPR_2,TPR_8 HKD3_k127_290099_2 1382359.JIAL01000001_gene2668 2.631e-166 556.0 COG1199@1|root,COG1199@2|Bacteria,3Y3DN@57723|Acidobacteria,2JHJZ@204432|Acidobacteriia 204432|Acidobacteriia L HELICc2 - - 3.6.4.12 ko:K03722 - - - - ko00000,ko01000,ko03400 - - - DEAD,Helicase_C_2 HKD3_k127_290099_1 1267533.KB906740_gene374 6.931e-179 578.0 COG0112@1|root,COG0112@2|Bacteria,3Y2JB@57723|Acidobacteria,2JI87@204432|Acidobacteriia 204432|Acidobacteriia E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism glyA - 2.1.2.1 ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 M00140,M00141,M00346,M00532 R00945,R09099 RC00022,RC00112,RC01583,RC02958 ko00000,ko00001,ko00002,ko01000 - - - SHMT HKD3_k127_290099_9 1382304.JNIL01000001_gene2347 1.3e-39 151.0 COG0698@1|root,COG0698@2|Bacteria,1V3HE@1239|Firmicutes,4HGXD@91061|Bacilli,278B9@186823|Alicyclobacillaceae 91061|Bacilli G Ribose/Galactose Isomerase rpiB - 5.3.1.6 ko:K01808 ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R01056,R09030 RC00376,RC00434 ko00000,ko00001,ko00002,ko01000 - - - LacAB_rpiB HKD3_k127_290099_4 266117.Rxyl_0846 2.188e-108 374.0 COG1092@1|root,COG1092@2|Bacteria,2GXDD@201174|Actinobacteria 201174|Actinobacteria J Methyltransferase - - 2.1.1.191 ko:K06969 - - - - ko00000,ko01000,ko03009 - - - Methyltrans_SAM HKD3_k127_290099_6 1501230.ET33_34620 4.056e-94 325.0 COG0624@1|root,COG0624@2|Bacteria,1TPSM@1239|Firmicutes,4HD69@91061|Bacilli,26TVQ@186822|Paenibacillaceae 91061|Bacilli E Peptidase dimerisation domain - - 3.4.17.11 ko:K01295 - - - - ko00000,ko01000,ko01002 - - - M20_dimer,Peptidase_M20,Peptidase_M28 HKD3_k127_290099_5 398767.Glov_0554 1.532e-95 320.0 COG0501@1|root,COG0501@2|Bacteria,1MUV4@1224|Proteobacteria,42MEE@68525|delta/epsilon subdivisions,2WJYV@28221|Deltaproteobacteria 28221|Deltaproteobacteria O Belongs to the peptidase M48B family htpX - - ko:K03799 - M00743 - - ko00000,ko00002,ko01000,ko01002 - - - Peptidase_M48 HKD3_k127_2911960_2 1132855.KB913035_gene425 6.054e-39 161.0 COG3203@1|root,COG3203@2|Bacteria,1P7S0@1224|Proteobacteria,2VNY2@28216|Betaproteobacteria,2KM1P@206350|Nitrosomonadales 206350|Nitrosomonadales M Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - - - - - - - - - - Porin_4 HKD3_k127_2911960_0 861299.J421_2669 5.141e-121 396.0 COG0320@1|root,COG0320@2|Bacteria,1ZTA3@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives lipA - 2.8.1.8 ko:K03644 ko00785,ko01100,map00785,map01100 - R07767,R07768 RC01978 ko00000,ko00001,ko01000 - - - LIAS_N,Radical_SAM HKD3_k127_2911960_1 1379270.AUXF01000004_gene3128 8.003e-106 351.0 COG1071@1|root,COG1071@2|Bacteria,1ZT5G@142182|Gemmatimonadetes 142182|Gemmatimonadetes C The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) pdhA - 1.2.4.1 ko:K00161 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00307 R00014,R00209,R01699,R03270 RC00004,RC00027,RC00627,RC02742,RC02744,RC02882 br01601,ko00000,ko00001,ko00002,ko01000 - - - E1_dh HKD3_k127_2916497_0 1379270.AUXF01000002_gene1363 3.175e-145 481.0 COG1629@1|root,COG4771@2|Bacteria 2|Bacteria P TonB-dependent receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - CarbopepD_reg_2,Plug,TonB_dep_Rec HKD3_k127_2916497_3 1382356.JQMP01000001_gene797 3.703e-30 124.0 COG1959@1|root,COG1959@2|Bacteria 2|Bacteria K 2 iron, 2 sulfur cluster binding - - - ko:K13643 - - - - ko00000,ko03000 - - - Rrf2 HKD3_k127_2916497_2 1191523.MROS_1103 9.402e-31 128.0 COG2010@1|root,COG2010@2|Bacteria 2|Bacteria C Cytochrome c - - 1.9.3.1 ko:K15862 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 - - ko00000,ko00001,ko00002,ko01000 3.D.4.3 - - Cytochrom_C,Cytochrome_CBB3 HKD3_k127_2916497_1 1123325.JHUV01000008_gene744 2.216e-62 230.0 COG4263@1|root,COG4263@2|Bacteria 2|Bacteria C nitrous-oxide reductase activity nosZ GO:0000041,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006812,GO:0006825,GO:0008150,GO:0015677,GO:0030001,GO:0042597,GO:0044464,GO:0051179,GO:0051234 1.7.2.4,1.9.3.1 ko:K00376,ko:K02275 ko00190,ko00910,ko01100,ko01120,map00190,map00910,map01100,map01120 M00155,M00529 R00081,R02804 RC00016,RC02861 ko00000,ko00001,ko00002,ko01000 3.D.4.2,3.D.4.4,3.D.4.6 - - COX2,Cupredoxin_1 HKD3_k127_2949548_1 1089553.Tph_c09100 1.351e-93 320.0 COG0407@1|root,COG0407@2|Bacteria,1TRJG@1239|Firmicutes,24B34@186801|Clostridia,42G9W@68295|Thermoanaerobacterales 186801|Clostridia H Evidence 4 Homologs of previously reported genes of - - - - - - - - - - - - URO-D HKD3_k127_2949548_0 1353531.AZNX01000005_gene3327 1.994e-159 517.0 COG4287@1|root,COG4287@2|Bacteria,1NP5V@1224|Proteobacteria 1224|Proteobacteria O PhoPQ-activated pathogenicity-related protein pqaA - - - - - - - - - - - PhoPQ_related HKD3_k127_2949548_2 926550.CLDAP_34490 3.021e-54 197.0 COG1210@1|root,COG1210@2|Bacteria,2G6XV@200795|Chloroflexi 200795|Chloroflexi M PFAM Nucleotidyl transferase - - 2.7.7.9 ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 M00129,M00361,M00362,M00549 R00289 RC00002 ko00000,ko00001,ko00002,ko01000 - - - NTP_transferase HKD3_k127_3030864_0 290397.Adeh_0474 5.15e-141 454.0 COG0409@1|root,COG0409@2|Bacteria,1MU1F@1224|Proteobacteria,42M6R@68525|delta/epsilon subdivisions,2WJDQ@28221|Deltaproteobacteria,2YTV5@29|Myxococcales 28221|Deltaproteobacteria O Belongs to the HypD family hypD - - ko:K04654 - - - - ko00000 - - iAF987.Gmet_0117 HypD HKD3_k127_3030864_1 290397.Adeh_0473 2.26e-137 449.0 COG0309@1|root,COG0309@2|Bacteria,1MVCC@1224|Proteobacteria,42M3M@68525|delta/epsilon subdivisions,2WJ8B@28221|Deltaproteobacteria,2YTZM@29|Myxococcales 28221|Deltaproteobacteria O hydrogenase expression formation protein HypE hypE - - ko:K04655 - - - - ko00000 - - - AIRS,AIRS_C HKD3_k127_3030864_2 1298920.KI911353_gene3148 7.778e-07 53.0 COG0375@1|root,COG0375@2|Bacteria,1VEP0@1239|Firmicutes,24MY9@186801|Clostridia,2233V@1506553|Lachnoclostridium 186801|Clostridia S Hydrogenase/urease nickel incorporation, metallochaperone, hypA hypA - - ko:K04651 - - - - ko00000,ko03110 - - - HypA HKD3_k127_3047037_3 1121335.Clst_0908 8.349e-79 288.0 COG4225@1|root,COG4225@2|Bacteria,1TRJ7@1239|Firmicutes,24806@186801|Clostridia,3WH3B@541000|Ruminococcaceae 186801|Clostridia S Glycosyl Hydrolase Family 88 - - 3.2.1.172 ko:K15532 - - - - ko00000,ko01000 - GH105 - Glyco_hydro_88 HKD3_k127_3047037_1 278963.ATWD01000001_gene3155 1.759e-127 432.0 COG4225@1|root,COG4225@2|Bacteria,3Y5S1@57723|Acidobacteria,2JMEP@204432|Acidobacteriia 204432|Acidobacteriia S Glycosyl Hydrolase Family 88 - - - - - - - - - - - - Glyco_hydro_88 HKD3_k127_3047037_4 1382359.JIAL01000001_gene570 1.285e-57 213.0 COG2755@1|root,COG2755@2|Bacteria,3Y3JX@57723|Acidobacteria,2JHS6@204432|Acidobacteriia 204432|Acidobacteriia E GDSL-like Lipase/Acylhydrolase family - - - - - - - - - - - - Lipase_GDSL_2 HKD3_k127_3047037_0 234267.Acid_4607 7.22e-226 711.0 COG3250@1|root,COG3250@2|Bacteria,3Y47P@57723|Acidobacteria 57723|Acidobacteria G Beta galactosidase small chain - - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - Bgal_small_N,DUF4981,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N HKD3_k127_3047037_6 452637.Oter_3614 2.403e-44 171.0 COG3250@1|root,COG3250@2|Bacteria,46U2Y@74201|Verrucomicrobia,3K7KS@414999|Opitutae 414999|Opitutae G Beta galactosidase small chain - - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - Bgal_small_N,DUF4981,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N HKD3_k127_3047037_2 1382359.JIAL01000001_gene573 2.026e-106 354.0 COG0823@1|root,COG0823@2|Bacteria,3Y2NB@57723|Acidobacteria,2JIUY@204432|Acidobacteriia 204432|Acidobacteriia U Oligogalacturonate lyase - - 4.2.2.6 ko:K01730 ko00040,map00040 - R04382 RC02124,RC02427 ko00000,ko00001,ko01000 - - - Pectate_lyase22 HKD3_k127_3047037_7 1125863.JAFN01000001_gene1323 7.039e-42 157.0 COG2402@1|root,COG2402@2|Bacteria,1NK19@1224|Proteobacteria,432DQ@68525|delta/epsilon subdivisions,2WY2Y@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Toxic component of a toxin-antitoxin (TA) module. An RNase - - - - - - - - - - - - PIN HKD3_k127_3047037_5 1254432.SCE1572_18590 2.433e-47 179.0 COG1487@1|root,COG1487@2|Bacteria,1MZB6@1224|Proteobacteria,42UNH@68525|delta/epsilon subdivisions,2WQQJ@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Toxic component of a toxin-antitoxin (TA) module. An RNase vapC - - ko:K18828 - - - - ko00000,ko01000,ko02048,ko03016 - - - PIN HKD3_k127_311243_2 639030.JHVA01000001_gene1842 2.308e-71 258.0 COG4772@1|root,COG4772@2|Bacteria,3Y9AD@57723|Acidobacteria,2JMFT@204432|Acidobacteriia 204432|Acidobacteriia P TonB dependent receptor - - - - - - - - - - - - CarboxypepD_reg,TonB_dep_Rec HKD3_k127_311243_0 234267.Acid_2151 4.46e-289 917.0 COG2120@1|root,COG2120@2|Bacteria,3Y3BV@57723|Acidobacteria 2|Bacteria S PFAM LmbE family protein mca - - ko:K22136 - - - - ko00000 - - - NPCBM_assoc,PIG-L HKD3_k127_311243_1 401053.AciPR4_3825 1.129e-73 280.0 COG0644@1|root,COG0644@2|Bacteria,3Y5JJ@57723|Acidobacteria,2JP4I@204432|Acidobacteriia 204432|Acidobacteriia C TIGRFAM geranylgeranyl reductase - - - - - - - - - - - - FAD_binding_3 HKD3_k127_311243_3 661478.OP10G_1580 1.503e-35 143.0 COG5267@1|root,COG5267@2|Bacteria 2|Bacteria S Protein of unknown function (DUF1800) - - - - - - - - - - - - DUF1800 HKD3_k127_3119633_5 509190.Cseg_0119 5.932e-16 79.0 2CM2H@1|root,32SDI@2|Bacteria,1NPEY@1224|Proteobacteria,2UJZ9@28211|Alphaproteobacteria,2KJCV@204458|Caulobacterales 204458|Caulobacterales - - - - - - - - - - - - - - - HKD3_k127_3119633_0 713586.KB900536_gene627 8.862e-81 275.0 COG0346@1|root,COG0346@2|Bacteria,1RJF9@1224|Proteobacteria,1SAAC@1236|Gammaproteobacteria,1WZ56@135613|Chromatiales 135613|Chromatiales E Glyoxalase-like domain - - - - - - - - - - - - Glyoxalase HKD3_k127_3119633_1 1379270.AUXF01000002_gene1538 6.098e-66 231.0 2DQZX@1|root,339KD@2|Bacteria 2|Bacteria S Lipocalin-like domain - - - - - - - - - - - - Lipocalin_5 HKD3_k127_3119633_7 911239.CF149_02394 2.667e-06 54.0 COG1359@1|root,COG1359@2|Bacteria,1N0W8@1224|Proteobacteria,1S9R0@1236|Gammaproteobacteria 1236|Gammaproteobacteria S (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - - - - - - - - - - ABM HKD3_k127_3119633_6 1379270.AUXF01000001_gene1876 9.344e-10 66.0 COG1514@1|root,COG1514@2|Bacteria 2|Bacteria J Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester - - - - - - - - - - - - 2_5_RNA_ligase2,Exo_endo_phos,PAP_central HKD3_k127_3119633_2 379066.GAU_3662 1.382e-44 172.0 28RT4@1|root,2ZE5G@2|Bacteria,1ZV80@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HKD3_k127_3119633_3 1449357.JQLK01000001_gene2227 8.922e-35 142.0 COG0454@1|root,COG0456@2|Bacteria,1WK4D@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus K FR47-like protein - - 2.3.1.82 ko:K18816 - - - - br01600,ko00000,ko01000,ko01504 - - - Acetyltransf_1 HKD3_k127_3119633_4 1535287.JP74_22250 1.665e-21 98.0 COG1309@1|root,COG1309@2|Bacteria,1N4TC@1224|Proteobacteria,2UDHH@28211|Alphaproteobacteria 28211|Alphaproteobacteria K Bacterial regulatory proteins, tetR family - - - - - - - - - - - - TetR_N HKD3_k127_3139747_0 1121930.AQXG01000002_gene2301 7.696e-121 406.0 COG1680@1|root,COG1680@2|Bacteria,4NIG6@976|Bacteroidetes,1IQXM@117747|Sphingobacteriia 976|Bacteroidetes V Beta-lactamase - - - - - - - - - - - - Beta-lactamase HKD3_k127_3139747_2 243365.CV_0910 0.0005146 47.0 COG1396@1|root,COG1396@2|Bacteria,1PPIG@1224|Proteobacteria,2WC3I@28216|Betaproteobacteria,2KTR0@206351|Neisseriales 206351|Neisseriales K 2TM domain - - - - - - - - - - - - 2TM HKD3_k127_3186256_1 1232410.KI421413_gene720 2.356e-133 437.0 COG0280@1|root,COG0281@1|root,COG0280@2|Bacteria,COG0281@2|Bacteria,1MU0A@1224|Proteobacteria,42MDI@68525|delta/epsilon subdivisions,2WIVY@28221|Deltaproteobacteria,43TZZ@69541|Desulfuromonadales 28221|Deltaproteobacteria C Malic enzyme, NAD binding domain maeB - 1.1.1.40 ko:K00029 ko00620,ko00710,ko01100,ko01120,ko01200,map00620,map00710,map01100,map01120,map01200 M00169,M00172 R00216 RC00105 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_1637 Malic_M,PTA_PTB,malic HKD3_k127_3186256_0 641524.ADICYQ_0766 5.504e-160 511.0 COG3507@1|root,COG3507@2|Bacteria,4NEIZ@976|Bacteroidetes,47NFQ@768503|Cytophagia 976|Bacteroidetes G Belongs to the glycosyl hydrolase 43 family - - - - - - - - - - - - Glyco_hydro_43 HKD3_k127_3205368_0 379066.GAU_0097 3.69e-88 312.0 COG2234@1|root,COG2234@2|Bacteria 2|Bacteria DZ aminopeptidase activity - - - ko:K07004 - - - - ko00000 - - - PKD,PPC,Peptidase_M10,Peptidase_M28,SLH HKD3_k127_321787_2 509635.N824_19840 1.652e-41 174.0 COG1409@1|root,COG1409@2|Bacteria,4NG8Q@976|Bacteroidetes,1IPS0@117747|Sphingobacteriia 976|Bacteroidetes S Calcineurin-like phosphoesterase - - - - - - - - - - - - Metallophos,Pur_ac_phosph_N HKD3_k127_321787_0 880073.Calab_2482 4.851e-118 394.0 COG0534@1|root,COG0534@2|Bacteria,2NPFE@2323|unclassified Bacteria 2|Bacteria V Mate efflux family protein - - - - - - - - - - - - ANKH,MatE HKD3_k127_321787_1 1189612.A33Q_0766 9.406e-93 309.0 COG0673@1|root,COG0673@2|Bacteria,4NF4Q@976|Bacteroidetes,47M9C@768503|Cytophagia 976|Bacteroidetes S Oxidoreductase domain protein - - - - - - - - - - - - GFO_IDH_MocA HKD3_k127_322047_4 1123508.JH636449_gene7285 1.72e-73 252.0 COG2110@1|root,COG2110@2|Bacteria,2IZUI@203682|Planctomycetes 203682|Planctomycetes S phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - - - - - - - - - - Macro HKD3_k127_322047_2 1121920.AUAU01000004_gene849 1.515e-126 412.0 COG0861@1|root,COG0861@2|Bacteria,3Y37C@57723|Acidobacteria 57723|Acidobacteria P PFAM Integral membrane protein TerC - - - ko:K05794 - - - - ko00000 - - - TerC HKD3_k127_322047_1 1379270.AUXF01000005_gene764 7.57e-136 462.0 COG2366@1|root,COG2366@2|Bacteria,1ZUMU@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Penicillin amidase - - 3.5.1.97 ko:K07116 - - - - ko00000,ko01000 - - - Penicil_amidase HKD3_k127_322047_0 530564.Psta_4258 1.608e-151 494.0 COG3119@1|root,COG3119@2|Bacteria,2IX0S@203682|Planctomycetes 203682|Planctomycetes P COG3119 Arylsulfatase A - - 3.1.6.1 ko:K01130 ko00140,ko00600,map00140,map00600 - R03980,R04856 RC00128,RC00231 ko00000,ko00001,ko01000 - - - Sulfatase HKD3_k127_322047_3 745776.DGo_CA0045 1.856e-76 272.0 COG4102@1|root,COG4102@2|Bacteria,1WJA2@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S Protein of unknown function (DUF1501) - - - - - - - - - - - - DUF1501 HKD3_k127_322047_5 1123508.JH636440_gene2396 3.827e-37 152.0 COG5267@1|root,COG5267@2|Bacteria,2IYR3@203682|Planctomycetes 203682|Planctomycetes S Protein of unknown function (DUF1800) - - - - - - - - - - - - DUF1800 HKD3_k127_3300355_0 929556.Solca_1935 3.929e-142 472.0 COG5164@1|root,COG5164@2|Bacteria,4NFN0@976|Bacteroidetes 976|Bacteroidetes K regulation of DNA-templated transcription, elongation - - - - - - - - - - - - - HKD3_k127_3300355_2 886293.Sinac_4422 2.604e-53 198.0 COG2253@1|root,COG2253@2|Bacteria 2|Bacteria V Psort location Cytoplasmic, score - - - - - - - - - - - - AbiEii HKD3_k127_3300355_4 929556.Solca_3860 1.002e-39 165.0 28MAS@1|root,318XW@2|Bacteria,4PPYP@976|Bacteroidetes,1IYW2@117747|Sphingobacteriia 976|Bacteroidetes S Protein of unknown function, DUF481 - - - - - - - - - - - - DUF481 HKD3_k127_3300355_1 1267534.KB906760_gene1239 3.982e-113 383.0 COG4325@1|root,COG4325@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - DUF2254 HKD3_k127_3300355_5 1500257.JQNM01000018_gene3316 5.646e-08 64.0 COG2067@1|root,COG2067@2|Bacteria,1RF1Y@1224|Proteobacteria,2U8A3@28211|Alphaproteobacteria,4BABB@82115|Rhizobiaceae 28211|Alphaproteobacteria I long-chain fatty acid transport protein - - - - - - - - - - - - OMP_b-brl HKD3_k127_3300355_3 1366050.N234_12860 2.462e-40 156.0 COG0569@1|root,COG2985@1|root,COG0569@2|Bacteria,COG2985@2|Bacteria,1MUVM@1224|Proteobacteria,2VN42@28216|Betaproteobacteria,1K59B@119060|Burkholderiaceae 28216|Betaproteobacteria P YidE YbjL duplication - - - ko:K07085 - - - - ko00000 2.A.81 - - Asp-Al_Ex,TrkA_C HKD3_k127_3311818_3 338963.Pcar_1248 1.208e-107 360.0 COG1190@1|root,COG1190@2|Bacteria,1MX1V@1224|Proteobacteria,42M90@68525|delta/epsilon subdivisions,2WJ9G@28221|Deltaproteobacteria,43S5N@69541|Desulfuromonadales 28221|Deltaproteobacteria J tRNA synthetases class II (D, K and N) lysS - 6.1.1.6 ko:K04567 ko00970,map00970 M00359,M00360 R03658 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_2,tRNA_anti-codon HKD3_k127_3311818_13 667014.Thein_1879 2.21e-25 112.0 COG0781@1|root,COG0781@2|Bacteria,2GHUU@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons nusB - - ko:K03625 - - - - ko00000,ko03009,ko03021 - - - NusB HKD3_k127_3311818_10 335543.Sfum_1381 8.281e-42 163.0 COG0054@1|root,COG0054@2|Bacteria,1RD9J@1224|Proteobacteria,42RQ6@68525|delta/epsilon subdivisions,2WNCZ@28221|Deltaproteobacteria,2MQEK@213462|Syntrophobacterales 28221|Deltaproteobacteria H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin ribH GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 ko:K00794 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R04457 RC00960 ko00000,ko00001,ko00002,ko01000 - - - DMRL_synthase HKD3_k127_3311818_5 1297570.MESS4_790094 3.705e-85 289.0 COG1024@1|root,COG1024@2|Bacteria,1MWZC@1224|Proteobacteria,2TRYS@28211|Alphaproteobacteria,43IN0@69277|Phyllobacteriaceae 28211|Alphaproteobacteria I Belongs to the enoyl-CoA hydratase isomerase family - - - - - - - - - - - - ECH_1 HKD3_k127_3311818_16 404589.Anae109_1519 8.973e-16 83.0 COG5652@1|root,COG5652@2|Bacteria,1NIUW@1224|Proteobacteria 1224|Proteobacteria S VanZ like family - - - - - - - - - - - - VanZ HKD3_k127_3311818_14 240015.ACP_0810 1.314e-21 100.0 2DTIS@1|root,33KJ1@2|Bacteria,3Y5U4@57723|Acidobacteria,2JN6V@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - HKD3_k127_3311818_2 926569.ANT_16180 1.732e-109 373.0 COG0524@1|root,COG0524@2|Bacteria,2G7YR@200795|Chloroflexi 200795|Chloroflexi G PFAM PfkB domain protein adoK - 2.7.1.20 ko:K00856 ko00230,ko01100,map00230,map01100 - R00185 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PfkB HKD3_k127_3311818_1 204669.Acid345_2626 4.49e-122 397.0 COG0005@1|root,COG0005@2|Bacteria,3Y2MA@57723|Acidobacteria,2JI5Q@204432|Acidobacteriia 204432|Acidobacteriia F Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates mtnP - 2.4.2.28 ko:K00772 ko00270,ko01100,map00270,map01100 M00034 R01402 RC00063,RC02819 ko00000,ko00001,ko00002,ko01000 - - - PNP_UDP_1 HKD3_k127_3311818_12 273068.TTE2386 4.267e-38 160.0 COG0346@1|root,COG0346@2|Bacteria,1V6SC@1239|Firmicutes,24HPI@186801|Clostridia,42GK9@68295|Thermoanaerobacterales 186801|Clostridia E PFAM Glyoxalase bleomycin resistance protein dioxygenase mce - 4.4.1.5,5.1.99.1 ko:K01759,ko:K05606 ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00620,map00630,map00640,map00720,map01100,map01120,map01200 M00373,M00375,M00376,M00741 R02530,R02765,R09979 RC00004,RC00740,RC00780,RC02739 ko00000,ko00001,ko00002,ko01000 - - - Glyoxalase_4 HKD3_k127_3311818_6 1382359.JIAL01000001_gene2613 3.551e-81 298.0 COG1703@1|root,COG1703@2|Bacteria,3Y40X@57723|Acidobacteria,2JHW8@204432|Acidobacteriia 204432|Acidobacteriia E ArgK protein - - - ko:K07588 - - - - ko00000,ko01000 - - - ArgK HKD3_k127_3311818_0 1382359.JIAL01000001_gene2614 1.715e-143 467.0 COG1960@1|root,COG1960@2|Bacteria,3Y3T6@57723|Acidobacteria,2JIV6@204432|Acidobacteriia 204432|Acidobacteriia I Acyl-CoA dehydrogenase, C-terminal domain - - - - - - - - - - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N HKD3_k127_3311818_17 215803.DB30_3792 2.383e-15 87.0 COG3239@1|root,COG3239@2|Bacteria,1PEHR@1224|Proteobacteria,439TU@68525|delta/epsilon subdivisions,2X3GW@28221|Deltaproteobacteria,2YW1Q@29|Myxococcales 28221|Deltaproteobacteria I fatty acid desaturase - - - - - - - - - - - - FA_desaturase HKD3_k127_3311818_18 1123248.KB893359_gene2175 0.0001325 51.0 2EH8M@1|root,33B0G@2|Bacteria,4NZHR@976|Bacteroidetes,1IZH9@117747|Sphingobacteriia 976|Bacteroidetes - - - - - - - - - - - - - - - HKD3_k127_3311818_7 1382306.JNIM01000001_gene3511 1.854e-77 284.0 COG0635@1|root,COG0635@2|Bacteria,2G5NK@200795|Chloroflexi 200795|Chloroflexi H Involved in the biosynthesis of porphyrin-containing compound hemN - - - - - - - - - - - HemN_C,Radical_SAM HKD3_k127_3311818_9 240015.ACP_1819 3.383e-54 200.0 COG1484@1|root,COG1484@2|Bacteria,3Y3EK@57723|Acidobacteria,2JI9M@204432|Acidobacteriia 204432|Acidobacteriia L IstB-like ATP binding protein - - - ko:K02315 - - - - ko00000,ko03032 - - - IstB_IS21 HKD3_k127_3311818_8 1047013.AQSP01000077_gene2269 2.313e-63 229.0 COG0568@1|root,COG0568@2|Bacteria,2NQT5@2323|unclassified Bacteria 2|Bacteria K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released rpoS - - ko:K03086 - - - - ko00000,ko03021 - - - Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4 HKD3_k127_3311818_11 1047013.AQSP01000077_gene2268 7.075e-40 154.0 COG0789@1|root,COG0789@2|Bacteria,2NPTR@2323|unclassified Bacteria 2|Bacteria K Transcriptional regulator, MerR family hspR GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - ko:K13640 - - - - ko00000,ko03000 - - - MerR_1 HKD3_k127_3311818_4 1340493.JNIF01000003_gene2440 1.189e-91 313.0 COG0484@1|root,COG0484@2|Bacteria,3Y2XW@57723|Acidobacteria 57723|Acidobacteria O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins - - - ko:K03686 - - - - ko00000,ko03029,ko03110 - - - DnaJ,DnaJ_C,DnaJ_CXXCXGXG HKD3_k127_3311818_15 941449.dsx2_3214 1.109e-17 86.0 COG0443@1|root,COG0443@2|Bacteria,1MVEN@1224|Proteobacteria,42M64@68525|delta/epsilon subdivisions,2WIWS@28221|Deltaproteobacteria,2M9A5@213115|Desulfovibrionales 28221|Deltaproteobacteria O Heat shock 70 kDa protein dnaK - - ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 - - - ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 1.A.33.1 - - HSP70 HKD3_k127_3373572_3 1349822.NSB1T_03265 6.546e-72 245.0 COG4799@1|root,COG4799@2|Bacteria,4NEMJ@976|Bacteroidetes,2FM4G@200643|Bacteroidia,22WJA@171551|Porphyromonadaceae 976|Bacteroidetes I Carboxyl transferase domain - - - - - - - - - - - - Carboxyl_trans HKD3_k127_3373572_7 511062.GU3_15220 1.044e-14 83.0 COG4770@1|root,COG4770@2|Bacteria,1P6RE@1224|Proteobacteria,1RM95@1236|Gammaproteobacteria,1Y5CK@135624|Aeromonadales 135624|Aeromonadales I Biotin carboxylase C-terminal domain - - 6.4.1.4 ko:K01968 ko00280,ko01100,map00280,map01100 M00036 R04138 RC00367,RC00942 ko00000,ko00001,ko00002,ko01000 - - - Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2 HKD3_k127_3373572_1 1304888.ATWF01000001_gene1069 2.802e-140 465.0 COG1883@1|root,COG1883@2|Bacteria,2GFBB@200930|Deferribacteres 200930|Deferribacteres C Na+-transporting oxaloacetate decarboxylase beta subunit - - 4.1.1.3 ko:K01572 ko00620,ko01100,map00620,map01100 - R00217 RC00040 ko00000,ko00001,ko01000,ko02000 3.B.1.1.1 - - OAD_beta HKD3_k127_3373572_4 273068.TTE0450 8.388e-68 241.0 COG3643@1|root,COG3643@2|Bacteria,1TP5T@1239|Firmicutes,24905@186801|Clostridia,42EU0@68295|Thermoanaerobacterales 186801|Clostridia E PFAM Formiminotransferase ftcD - 2.1.2.5 ko:K00603 ko00340,ko00670,ko01100,map00340,map00670,map01100 - R02287,R03189 RC00165,RC00221,RC00223,RC00870 ko00000,ko00001,ko01000 - - - FTCD,FTCD_N HKD3_k127_3373572_2 502025.Hoch_2041 2.826e-81 302.0 COG0457@1|root,COG0515@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,1MV1P@1224|Proteobacteria,42Q67@68525|delta/epsilon subdivisions,2WKZ1@28221|Deltaproteobacteria 68525|delta/epsilon subdivisions KLT serine threonine protein kinase - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase HKD3_k127_3373572_0 204669.Acid345_4586 5.291e-285 883.0 COG0488@1|root,COG0488@2|Bacteria,3Y340@57723|Acidobacteria,2JI2P@204432|Acidobacteriia 57723|Acidobacteria S ABC transporter - - - - - - - - - - - - ABC_tran,ABC_tran_Xtn HKD3_k127_3373572_5 1293054.HSACCH_02179 1.912e-64 237.0 COG2407@1|root,COG2407@2|Bacteria,1TPEK@1239|Firmicutes,24BY2@186801|Clostridia 186801|Clostridia G Converts the aldose L-fucose into the corresponding ketose L-fuculose - - - - - - - - - - - - - HKD3_k127_3373572_9 1111069.TCCBUS3UF1_19940 2.279e-06 60.0 COG1470@1|root,COG3895@1|root,COG1470@2|Bacteria,COG3895@2|Bacteria,1WIA5@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S PFAM PEGA domain - - - - - - - - - - - - DUF4384,PEGA HKD3_k127_3373572_6 1121324.CLIT_23c00600 6.797e-43 163.0 COG3760@1|root,COG3760@2|Bacteria,1V1JF@1239|Firmicutes,24FVD@186801|Clostridia,25RUR@186804|Peptostreptococcaceae 186801|Clostridia S YbaK proline--tRNA ligase associated domain protein proX - - ko:K19055 - - - - ko00000,ko01000,ko03016 - - - tRNA_edit HKD3_k127_3373572_8 1121403.AUCV01000033_gene3625 5.727e-12 74.0 2CI8B@1|root,334QN@2|Bacteria,1NX7P@1224|Proteobacteria,430WI@68525|delta/epsilon subdivisions,2WVZA@28221|Deltaproteobacteria 28221|Deltaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_33856_0 243231.GSU2101 1.531e-119 400.0 COG1882@1|root,COG1882@2|Bacteria,1MWBF@1224|Proteobacteria,42M5J@68525|delta/epsilon subdivisions,2WJAK@28221|Deltaproteobacteria,43TNZ@69541|Desulfuromonadales 28221|Deltaproteobacteria C Glycine radical - - 2.3.1.54,4.1.99.11,4.3.99.4 ko:K00656,ko:K07540,ko:K20038 ko00620,ko00623,ko00640,ko00650,ko01100,ko01120,ko01220,map00620,map00623,map00640,map00650,map01100,map01120,map01220 M00418 R00212,R05598,R06987 RC00004,RC01181,RC01433,RC01434,RC02742,RC02833 ko00000,ko00001,ko00002,ko01000 - - - Gly_radical,PFL-like HKD3_k127_33856_2 243231.GSU2102 3.819e-83 293.0 COG1180@1|root,COG1180@2|Bacteria,1QJHU@1224|Proteobacteria,42R2E@68525|delta/epsilon subdivisions,2WMYN@28221|Deltaproteobacteria,43W3T@69541|Desulfuromonadales 28221|Deltaproteobacteria O Radical SAM superfamily - - 1.97.1.4 ko:K04069 - - R04710 - ko00000,ko01000 - - - Fer4,Fer4_12,Radical_SAM HKD3_k127_33856_3 639282.DEFDS_2105 1.783e-61 220.0 COG1802@1|root,COG1802@2|Bacteria 2|Bacteria K Transcriptional regulator - - - - - - - - - - - - FCD,GntR HKD3_k127_33856_4 1416759.AYMR01000026_gene3434 1.747e-05 57.0 COG4941@1|root,COG4941@2|Bacteria,2GJ36@201174|Actinobacteria,4FKQR@85023|Microbacteriaceae 201174|Actinobacteria K Sigma-70 region 2 - - - - - - - - - - - - Sigma70_r2,Sigma70_r4_2 HKD3_k127_33856_1 1386089.N865_14270 1.128e-85 298.0 arCOG10456@1|root,2ZA6T@2|Bacteria,2IT80@201174|Actinobacteria 201174|Actinobacteria - - - - - - - - - - - - - - - HKD3_k127_340079_3 1089547.KB913013_gene2387 1.047e-81 275.0 COG4805@1|root,COG4805@2|Bacteria,4NFAK@976|Bacteroidetes,47KRU@768503|Cytophagia 976|Bacteroidetes S Bacterial protein of unknown function (DUF885) - - - - - - - - - - - - DUF885 HKD3_k127_340079_4 338966.Ppro_2846 1.918e-75 274.0 28IWG@1|root,2Z8US@2|Bacteria,1NHDW@1224|Proteobacteria,42MHT@68525|delta/epsilon subdivisions,2WMMN@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Predicted membrane protein (DUF2157) - - - - - - - - - - - - DUF2157 HKD3_k127_340079_7 338966.Ppro_2847 4.854e-22 105.0 2BCPH@1|root,3269T@2|Bacteria,1RJN1@1224|Proteobacteria,42TQQ@68525|delta/epsilon subdivisions,2WQ21@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Domain of unknown function (DUF4824) - - - - - - - - - - - - DUF4824 HKD3_k127_340079_9 1122604.JONR01000045_gene2493 5.265e-19 98.0 2A20V@1|root,30QAU@2|Bacteria,1RDQH@1224|Proteobacteria,1T055@1236|Gammaproteobacteria,1X6SQ@135614|Xanthomonadales 135614|Xanthomonadales - - - - - - - - - - - - - - - HKD3_k127_340079_6 395965.Msil_3484 5.061e-39 149.0 COG4113@1|root,COG4113@2|Bacteria,1NEE2@1224|Proteobacteria,2UJ3R@28211|Alphaproteobacteria 28211|Alphaproteobacteria S Toxic component of a toxin-antitoxin (TA) module. An RNase - - - - - - - - - - - - PIN HKD3_k127_340079_8 395965.Msil_3485 5.351e-20 94.0 2A6UU@1|root,30VP8@2|Bacteria,1NQ5B@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - HKD3_k127_340079_1 215803.DB30_5313 2.095e-174 562.0 COG2270@1|root,COG2270@2|Bacteria,1MWXB@1224|Proteobacteria,42N2B@68525|delta/epsilon subdivisions,2WJS9@28221|Deltaproteobacteria,2YVFZ@29|Myxococcales 28221|Deltaproteobacteria S Major facilitator - - - ko:K06902 ko04138,map04138 - - - ko00000,ko00001,ko02000,ko04131 2.A.1.24,9.A.15.1 - - ATG22 HKD3_k127_340079_10 1267534.KB906759_gene1860 2.053e-14 83.0 2C730@1|root,32UQY@2|Bacteria,3Y59Z@57723|Acidobacteria,2JJP2@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - HKD3_k127_340079_0 296591.Bpro_2161 0.0 1214.0 COG1884@1|root,COG2185@1|root,COG1884@2|Bacteria,COG2185@2|Bacteria,1MUXX@1224|Proteobacteria,2VIT2@28216|Betaproteobacteria,4AA6N@80864|Comamonadaceae 28216|Betaproteobacteria I Methylmalonyl-CoA mutase large subunit icmF - 5.4.99.2 ko:K01847 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00373,M00376,M00741 R00833 RC00395 ko00000,ko00001,ko00002,ko01000 - - - B12-binding,MM_CoA_mutase HKD3_k127_340079_2 420662.Mpe_A1015 5.12e-149 486.0 COG1703@1|root,COG1703@2|Bacteria,1MVI0@1224|Proteobacteria,2VIRF@28216|Betaproteobacteria,1KJBP@119065|unclassified Burkholderiales 28216|Betaproteobacteria E ArgK protein argK - - ko:K07588 - - - - ko00000,ko01000 - - - ArgK HKD3_k127_340079_5 269799.Gmet_2818 4.018e-63 238.0 COG0784@1|root,COG2202@1|root,COG2208@1|root,COG3829@1|root,COG0784@2|Bacteria,COG2202@2|Bacteria,COG2208@2|Bacteria,COG3829@2|Bacteria,1NC9X@1224|Proteobacteria,43C4D@68525|delta/epsilon subdivisions,2X7EU@28221|Deltaproteobacteria 28221|Deltaproteobacteria T Domains REC, PAS, PAS, PP2C - - 3.1.3.3 ko:K07315 - - - - ko00000,ko01000,ko03021 - - - PAS_3,PAS_9,Response_reg,SpoIIE HKD3_k127_3407621_1 593750.Metfor_1905 2.754e-15 91.0 arCOG00805@1|root,arCOG00805@2157|Archaea,2XVHZ@28890|Euryarchaeota 28890|Euryarchaeota L COG3857 ATP-dependent nuclease, subunit B - - 3.6.4.12 ko:K16899 - - - - ko00000,ko01000,ko03400 - - - PDDEXK_1 HKD3_k127_3407621_0 1297742.A176_04445 1.264e-114 379.0 COG0330@1|root,COG0330@2|Bacteria,1MUM2@1224|Proteobacteria,42NUT@68525|delta/epsilon subdivisions,2WKQX@28221|Deltaproteobacteria 28221|Deltaproteobacteria O HflC and HflK could encode or regulate a protease hflK - - ko:K04088 - M00742 - - ko00000,ko00002,ko01000 - - - Band_7 HKD3_k127_3407621_2 493475.GARC_2548 7.18e-05 50.0 COG0330@1|root,COG0330@2|Bacteria,1MV7R@1224|Proteobacteria,1RMF2@1236|Gammaproteobacteria,466PT@72275|Alteromonadaceae 1236|Gammaproteobacteria O HflC and HflK could regulate a protease - - - ko:K04087 - M00742 - - ko00000,ko00002,ko01000 - - - Band_7 HKD3_k127_3438525_14 243275.TDE_0046 1.147e-05 49.0 COG3404@1|root,COG3404@2|Bacteria,2J8KU@203691|Spirochaetes 203691|Spirochaetes E Formiminotransferase-cyclodeaminase - - - - - - - - - - - - FTCD_C HKD3_k127_3438525_1 945713.IALB_2036 1.687e-183 583.0 COG0205@1|root,COG0205@2|Bacteria 2|Bacteria G 6-phosphofructokinase activity pfp GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008443,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0046835,GO:0046872,GO:0047334,GO:0071704,GO:1901135 2.7.1.11,2.7.1.90 ko:K00850,ko:K00895,ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 M00001,M00345 R00756,R00764,R02073,R03236,R03237,R03238,R03239,R04779 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 - - - PFK HKD3_k127_3438525_12 1298880.AUEV01000008_gene2308 2.297e-54 201.0 COG0566@1|root,COG0566@2|Bacteria,2GJ12@201174|Actinobacteria 201174|Actinobacteria J rRNA methyltransferase spoU2 - - - - - - - - - - - SpoU_methylase HKD3_k127_3438525_3 234267.Acid_2224 3.219e-140 455.0 COG0624@1|root,COG0624@2|Bacteria,3Y7TX@57723|Acidobacteria 57723|Acidobacteria E Peptidase family M20/M25/M40 - - 3.5.1.16 ko:K01438 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028,M00845 R00669,R09107 RC00064,RC00300 ko00000,ko00001,ko00002,ko01000 - - - M20_dimer,Peptidase_M20,Peptidase_M28 HKD3_k127_3438525_7 1121920.AUAU01000004_gene672 2.956e-110 367.0 COG3342@1|root,COG3342@2|Bacteria,3Y80E@57723|Acidobacteria 57723|Acidobacteria S Family of unknown function (DUF1028) - - - - - - - - - - - - DUF1028 HKD3_k127_3438525_0 234267.Acid_3204 6.4e-318 1003.0 COG4447@1|root,COG4447@2|Bacteria 2|Bacteria S cellulose binding - - - - - - - - - - - - BNR,Sortilin-Vps10 HKD3_k127_3438525_11 1121920.AUAU01000018_gene1797 5.445e-58 216.0 COG0477@1|root,COG2814@2|Bacteria,3Y95Q@57723|Acidobacteria 57723|Acidobacteria EGP Major Facilitator Superfamily - - - - - - - - - - - - MFS_1 HKD3_k127_3438525_6 1242864.D187_008586 2.757e-125 410.0 COG0153@1|root,COG0153@2|Bacteria,1MVQD@1224|Proteobacteria,42Y39@68525|delta/epsilon subdivisions,2WSYZ@28221|Deltaproteobacteria,2YV2T@29|Myxococcales 28221|Deltaproteobacteria G Belongs to the GHMP kinase family. GalK subfamily galK - 2.7.1.6 ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00554,M00632 R01092 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko04147 - - - GHMP_kinases_C,GHMP_kinases_N,GalKase_gal_bdg HKD3_k127_3438525_9 215803.DB30_6258 8.101e-86 306.0 COG1524@1|root,COG1524@2|Bacteria,1R5V5@1224|Proteobacteria,430H4@68525|delta/epsilon subdivisions,2WVV3@28221|Deltaproteobacteria,2Z01J@29|Myxococcales 28221|Deltaproteobacteria S Type I phosphodiesterase / nucleotide pyrophosphatase - - - - - - - - - - - - Phosphodiest HKD3_k127_3438525_10 760192.Halhy_2464 2.298e-73 257.0 COG0101@1|root,COG0101@2|Bacteria,4NFDC@976|Bacteroidetes,1IYH5@117747|Sphingobacteriia 976|Bacteroidetes J tRNA pseudouridine synthase truA - 5.4.99.12 ko:K06173 - - - - ko00000,ko01000,ko03016 - - - PseudoU_synth_1 HKD3_k127_3438525_2 926569.ANT_14860 1.204e-181 576.0 COG1167@1|root,COG1167@2|Bacteria,2G61E@200795|Chloroflexi 200795|Chloroflexi EK PFAM Aminotransferase class I and II - - - ko:K05825 ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210 - R01939 RC00006 ko00000,ko00001,ko01000 - - - Aminotran_1_2 HKD3_k127_3438525_13 768671.ThimaDRAFT_4663 6.337e-25 121.0 2CH72@1|root,32ZK4@2|Bacteria,1N8YD@1224|Proteobacteria,1SCY7@1236|Gammaproteobacteria,1WYDM@135613|Chromatiales 135613|Chromatiales S Protein of unknown function (DUF2878) - - - - - - - - - - - - DUF2878 HKD3_k127_3438525_4 452637.Oter_1512 6.845e-139 471.0 COG0577@1|root,COG0577@2|Bacteria,46YY4@74201|Verrucomicrobia,3K9RN@414999|Opitutae 414999|Opitutae V MacB-like periplasmic core domain - - - - - - - - - - - - - HKD3_k127_3438525_5 452637.Oter_1513 2.492e-136 453.0 COG0577@1|root,COG0577@2|Bacteria 2|Bacteria V efflux transmembrane transporter activity - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD HKD3_k127_3438525_8 452637.Oter_1514 8.191e-94 310.0 COG1136@1|root,COG1136@2|Bacteria,46YZ8@74201|Verrucomicrobia,3K9FX@414999|Opitutae 414999|Opitutae P PFAM ABC transporter related - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_3469620_0 880073.Calab_3266 3.732e-146 479.0 COG1055@1|root,COG1055@2|Bacteria,2NQJ3@2323|unclassified Bacteria 2|Bacteria P Putative citrate transport arsB - - - - - - - - - - - CitMHS_2 HKD3_k127_3469620_2 415426.Hbut_0770 1.372e-43 167.0 COG0009@1|root,arCOG01952@2157|Archaea,2XPW0@28889|Crenarchaeota 28889|Crenarchaeota J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine sua5 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 2.7.7.87 ko:K07566 - - R10463 RC00745 ko00000,ko01000,ko03009,ko03016 - - - SUA5,Sua5_yciO_yrdC HKD3_k127_3469620_1 760568.Desku_0259 2.539e-109 370.0 COG2262@1|root,COG2262@2|Bacteria,1TNZB@1239|Firmicutes,248IU@186801|Clostridia,2606G@186807|Peptococcaceae 186801|Clostridia S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis hflX - - ko:K03665 - - - - ko00000,ko03009 - - - GTP-bdg_M,GTP-bdg_N,MMR_HSR1 HKD3_k127_3469620_3 631362.Thi970DRAFT_04164 1.856e-05 56.0 COG0457@1|root,COG3914@1|root,COG0457@2|Bacteria,COG3914@2|Bacteria,1MVMG@1224|Proteobacteria,1RR2P@1236|Gammaproteobacteria,1WXP6@135613|Chromatiales 135613|Chromatiales O O-linked N-acetylglucosamine transferase, SPINDLY family - - - - - - - - - - - - Glyco_transf_41,TPR_1,TPR_11,TPR_16,TPR_19,TPR_2,TPR_8 HKD3_k127_3478345_2 861299.J421_6223 6.043e-58 210.0 COG2091@1|root,COG2091@2|Bacteria,1ZUE3@142182|Gemmatimonadetes 142182|Gemmatimonadetes H lysine biosynthetic process via aminoadipic acid - - - - - - - - - - - - - HKD3_k127_3478345_0 1408473.JHXO01000001_gene1962 6.494e-131 428.0 COG0667@1|root,COG0667@2|Bacteria,4PPAM@976|Bacteroidetes,2G14T@200643|Bacteroidia 976|Bacteroidetes C Aldo/keto reductase family - - - - - - - - - - - - Aldo_ket_red HKD3_k127_3478345_1 886293.Sinac_1335 8.212e-106 348.0 COG1413@1|root,COG1413@2|Bacteria,2IYWU@203682|Planctomycetes 203682|Planctomycetes C Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 HKD3_k127_3478345_3 1123242.JH636434_gene5057 2.157e-07 54.0 COG4299@1|root,COG4299@2|Bacteria,2IX5Y@203682|Planctomycetes 203682|Planctomycetes S COGs COG4299 conserved - - - - - - - - - - - - - HKD3_k127_3490662_3 1379270.AUXF01000001_gene2301 9.188e-26 118.0 COG0457@1|root,COG4783@1|root,COG0457@2|Bacteria,COG4783@2|Bacteria,1ZUF5@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Tetratricopeptide repeat - - - - - - - - - - - - - HKD3_k127_3490662_2 234267.Acid_7677 1.783e-55 201.0 COG1595@1|root,COG1595@2|Bacteria,3Y7UW@57723|Acidobacteria 57723|Acidobacteria K ECF sigma factor - - - - - - - - - - - - Sigma70_ECF HKD3_k127_3490662_1 1379270.AUXF01000001_gene2347 4.171e-60 228.0 COG0515@1|root,COG0515@2|Bacteria,1ZUTR@142182|Gemmatimonadetes 142182|Gemmatimonadetes KLT Protein kinase domain - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase HKD3_k127_3490662_0 1121904.ARBP01000022_gene3483 5.103e-222 711.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,47KZ5@768503|Cytophagia 976|Bacteroidetes G PFAM Glycosyl Hydrolase - - - - - - - - - - - - Glyco_hydro_92 HKD3_k127_3490662_5 595460.RRSWK_00889 5.876e-16 90.0 COG0642@1|root,COG0642@2|Bacteria,COG2205@2|Bacteria,2IXFD@203682|Planctomycetes 203682|Planctomycetes T Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - - - - - - - - - - GAF_2,HAMP,HATPase_c,HisKA,Hpt,PAS_9,Response_reg HKD3_k127_3490662_6 553219.CAMSH0001_0659 6.378e-14 81.0 2AHNX@1|root,3180Y@2|Bacteria,1PZMA@1224|Proteobacteria,42QU6@68525|delta/epsilon subdivisions,2YNVR@29547|Epsilonproteobacteria 29547|Epsilonproteobacteria S Protein of unknown function (DUF4230) - - - - - - - - - - - - DUF4230 HKD3_k127_355076_0 665571.STHERM_c06230 1.914e-108 373.0 COG0281@1|root,COG0281@2|Bacteria,2J5DN@203691|Spirochaetes 203691|Spirochaetes C Malic enzyme, NAD binding domain mdh - 1.1.1.38,1.1.1.40 ko:K00027,ko:K00029 ko00620,ko00710,ko01100,ko01120,ko01200,ko02020,map00620,map00710,map01100,map01120,map01200,map02020 M00169,M00172 R00214,R00216 RC00105 ko00000,ko00001,ko00002,ko01000 - - - Malic_M,malic HKD3_k127_355076_1 1035308.AQYY01000002_gene514 5.691e-37 162.0 COG0574@1|root,COG3848@1|root,COG0574@2|Bacteria,COG3848@2|Bacteria,1UIEA@1239|Firmicutes,25EJM@186801|Clostridia,260AR@186807|Peptococcaceae 186801|Clostridia GT Pyruvate phosphate dikinase, PEP ppdK - 2.7.9.1,2.7.9.2 ko:K01006,ko:K01007 ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200 M00169,M00171,M00172,M00173,M00374 R00199,R00206 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000 - - - PEP-utilizers,PEP-utilizers_C,PPDK_N HKD3_k127_355343_2 383372.Rcas_1689 7.128e-09 65.0 COG1807@1|root,COG1807@2|Bacteria,2G8SF@200795|Chloroflexi,3757N@32061|Chloroflexia 32061|Chloroflexia M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - - - - - - - - - - - HKD3_k127_355343_1 1382306.JNIM01000001_gene647 1.761e-35 150.0 COG0859@1|root,COG0859@2|Bacteria 2|Bacteria M ADP-heptose-lipopolysaccharide heptosyltransferase activity - - - - - - - - - - - - Glyco_transf_9 HKD3_k127_355343_0 357808.RoseRS_4085 1.569e-43 161.0 COG0463@1|root,COG0463@2|Bacteria 2|Bacteria M Glycosyl transferase, family 2 - - - - - - - - - - - - Glycos_transf_2 HKD3_k127_3628764_8 1047013.AQSP01000140_gene2480 1.049e-54 219.0 COG0769@1|root,COG0769@2|Bacteria,2NNZM@2323|unclassified Bacteria 2|Bacteria M acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan murE - 6.3.2.10,6.3.2.13 ko:K01928,ko:K15792 ko00300,ko00550,map00300,map00550 - R02788,R04617 RC00064,RC00090,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M HKD3_k127_3628764_0 555079.Toce_0946 3.99e-116 404.0 COG0768@1|root,COG2815@1|root,COG0768@2|Bacteria,COG2815@2|Bacteria,1TP93@1239|Firmicutes,248KB@186801|Clostridia,42FD0@68295|Thermoanaerobacterales 186801|Clostridia M TIGRFAM stage V sporulation protein D spoVD - 3.4.16.4 ko:K03587,ko:K08384 ko00550,ko01501,map00550,map01501 - - - ko00000,ko00001,ko01000,ko01011,ko03036 - - - PASTA,PBP_dimer,Transpeptidase HKD3_k127_3628764_6 867903.ThesuDRAFT_01667 1.089e-86 302.0 COG0275@1|root,COG0275@2|Bacteria,1TNZV@1239|Firmicutes,248B5@186801|Clostridia,3WCDX@538999|Clostridiales incertae sedis 186801|Clostridia J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA rsmH - 2.1.1.199 ko:K03438 - - - - ko00000,ko01000,ko03009 - - - Methyltransf_5 HKD3_k127_3628764_9 240015.ACP_1095 1.36e-42 160.0 COG2001@1|root,COG2001@2|Bacteria,3Y4NF@57723|Acidobacteria,2JJA0@204432|Acidobacteriia 204432|Acidobacteriia K Belongs to the MraZ family mraZ - - ko:K03925 - - - - ko00000 - - - MraZ HKD3_k127_3628764_4 204669.Acid345_3198 1.394e-98 345.0 COG0012@1|root,COG0012@2|Bacteria,3Y3D9@57723|Acidobacteria,2JIPE@204432|Acidobacteriia 204432|Acidobacteriia J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner ychF - - ko:K06942 - - - - ko00000,ko03009 - - - MMR_HSR1,YchF-GTPase_C HKD3_k127_3628764_2 326427.Cagg_2454 1.272e-102 344.0 COG0438@1|root,COG0438@2|Bacteria,2G7XU@200795|Chloroflexi,3755Q@32061|Chloroflexia 32061|Chloroflexia M PFAM glycosyl transferase group 1 - - - - - - - - - - - - Glycos_transf_1 HKD3_k127_3628764_1 1283299.AUKG01000002_gene4688 2.319e-114 378.0 COG1215@1|root,COG1215@2|Bacteria,2I2PK@201174|Actinobacteria,4CPE1@84995|Rubrobacteria 84995|Rubrobacteria M Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 HKD3_k127_3628764_5 83406.HDN1F_30910 3.942e-87 296.0 COG0463@1|root,COG0463@2|Bacteria,1MXC1@1224|Proteobacteria,1RRHP@1236|Gammaproteobacteria,1J9RZ@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria M Glycosyltransferase like family 2 - - - - - - - - - - - - Glycos_transf_2 HKD3_k127_3628764_10 1128421.JAGA01000002_gene1356 2.767e-21 111.0 COG1807@1|root,COG1807@2|Bacteria 1128421.JAGA01000002_gene1356|- M 4-amino-4-deoxy-L-arabinose transferase activity - - - - - - - - - - - - - HKD3_k127_3628764_7 443143.GM18_1135 8.184e-73 253.0 COG1216@1|root,COG1216@2|Bacteria,1QX3U@1224|Proteobacteria,42RP8@68525|delta/epsilon subdivisions,2WNF5@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Glycosyl transferase family 2 - - 2.4.1.83 ko:K00721 ko00510,ko01100,map00510,map01100 - R01009 RC00005 ko00000,ko00001,ko01000,ko01003 - GT2 - Glycos_transf_2 HKD3_k127_3628764_3 357808.RoseRS_2958 6.22e-101 353.0 COG0438@1|root,COG0438@2|Bacteria,2G6YP@200795|Chloroflexi,374VD@32061|Chloroflexia 32061|Chloroflexia M PFAM glycosyl transferase group 1 - - - - - - - - - - - - Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1 HKD3_k127_3641028_0 204669.Acid345_4118 1.754e-137 467.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,3Y2PK@57723|Acidobacteria,2JM7T@204432|Acidobacteriia 57723|Acidobacteria KLTU Protein kinase domain - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PD40,Pkinase HKD3_k127_3641028_3 1122919.KB905610_gene4509 2.081e-08 63.0 COG5492@1|root,COG5492@2|Bacteria,1U17M@1239|Firmicutes,4IAPR@91061|Bacilli,2730M@186822|Paenibacillaceae 91061|Bacilli N domain, Protein - - - - - - - - - - - - - HKD3_k127_3641028_2 1380390.JIAT01000010_gene4968 9.062e-19 86.0 COG3631@1|root,COG3631@2|Bacteria,2GRE5@201174|Actinobacteria 201174|Actinobacteria S SnoaL-like domain - - - ko:K06893 - - - - ko00000 - - - SnoaL_2 HKD3_k127_3641706_3 1192034.CAP_8031 5.984e-60 214.0 COG0667@1|root,COG0667@2|Bacteria,1NWQE@1224|Proteobacteria,42ZW2@68525|delta/epsilon subdivisions,2WVDI@28221|Deltaproteobacteria,2YVXI@29|Myxococcales 28221|Deltaproteobacteria C Aldo/keto reductase family - - - - - - - - - - - - Aldo_ket_red,HEAT_2 HKD3_k127_3641706_2 1232410.KI421412_gene357 1.87e-102 345.0 COG0604@1|root,COG0604@2|Bacteria,1MWBD@1224|Proteobacteria,42PQH@68525|delta/epsilon subdivisions,2WM5W@28221|Deltaproteobacteria,43TDI@69541|Desulfuromonadales 28221|Deltaproteobacteria C Zinc-binding dehydrogenase - - 1.6.5.5 ko:K00344 - - - - ko00000,ko01000 - - - ADH_N,ADH_zinc_N,ADH_zinc_N_2 HKD3_k127_3641706_1 640081.Dsui_3142 5.682e-157 505.0 COG0821@1|root,COG0821@2|Bacteria,1MUAX@1224|Proteobacteria,2VID7@28216|Betaproteobacteria,2KUBR@206389|Rhodocyclales 206389|Rhodocyclales I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate ispG - 1.17.7.1,1.17.7.3 ko:K03526 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R08689,R10859 RC01486 ko00000,ko00001,ko00002,ko01000 - - - GcpE HKD3_k127_3641706_0 234267.Acid_7828 7.12e-176 566.0 COG2866@1|root,COG2866@2|Bacteria,3Y3X8@57723|Acidobacteria 57723|Acidobacteria E Peptidase M14, carboxypeptidase A - - - - - - - - - - - - Peptidase_M14 HKD3_k127_3664608_0 522306.CAP2UW1_1261 1.807e-173 559.0 COG5164@1|root,COG5164@2|Bacteria,1MX1Z@1224|Proteobacteria,2VKEC@28216|Betaproteobacteria 28216|Betaproteobacteria K regulation of DNA-templated transcription, elongation - - - - - - - - - - - - - HKD3_k127_3664608_1 522306.CAP2UW1_3401 2.884e-173 556.0 COG1752@1|root,COG1752@2|Bacteria,1MUI6@1224|Proteobacteria,2VHA3@28216|Betaproteobacteria 28216|Betaproteobacteria S Phospholipase, patatin family - - - ko:K07001 - - - - ko00000 - - - Patatin HKD3_k127_3664608_5 1300345.LF41_902 4.748e-48 184.0 COG2067@1|root,COG2067@2|Bacteria,1RJIQ@1224|Proteobacteria,1SAC1@1236|Gammaproteobacteria 1236|Gammaproteobacteria I long-chain fatty acid transport protein - - - - - - - - - - - - - HKD3_k127_3664608_4 522306.CAP2UW1_1260 5.158e-73 255.0 2EB3I@1|root,33549@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_3664608_3 522306.CAP2UW1_1259 3.755e-75 272.0 COG3900@1|root,COG3900@2|Bacteria,1RD2W@1224|Proteobacteria 1224|Proteobacteria S Predicted periplasmic protein (DUF2092) - - - - - - - - - - - - DUF2092 HKD3_k127_3664608_2 1454004.AW11_00199 1.891e-83 280.0 COG3637@1|root,COG3637@2|Bacteria,1R3Z1@1224|Proteobacteria,2VV9Q@28216|Betaproteobacteria,1KR1Z@119066|unclassified Betaproteobacteria 28216|Betaproteobacteria M Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - - - - - - - - - - - HKD3_k127_366751_3 484018.BACPLE_03389 4.144e-13 79.0 COG2234@1|root,COG2234@2|Bacteria,4NE66@976|Bacteroidetes,2FPXP@200643|Bacteroidia,4AMI8@815|Bacteroidaceae 976|Bacteroidetes S Peptidase family M28 - - - - - - - - - - - - PA,Peptidase_M28 HKD3_k127_366751_0 909663.KI867150_gene1447 5.644e-99 337.0 COG1785@1|root,COG1785@2|Bacteria,1MXI2@1224|Proteobacteria,42N40@68525|delta/epsilon subdivisions,2WKUV@28221|Deltaproteobacteria,2MRT9@213462|Syntrophobacterales 28221|Deltaproteobacteria P Belongs to the alkaline phosphatase family - - 3.1.3.1 ko:K01077 ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020 M00126 R02135,R04620 RC00017 ko00000,ko00001,ko00002,ko00537,ko01000,ko04147 - - - Alk_phosphatase HKD3_k127_366751_1 1267533.KB906733_gene3362 1.527e-88 314.0 COG0457@1|root,COG3710@1|root,COG5616@1|root,COG0457@2|Bacteria,COG3710@2|Bacteria,COG5616@2|Bacteria,3Y7E7@57723|Acidobacteria,2JKGS@204432|Acidobacteriia 204432|Acidobacteriia K Transcriptional regulatory protein, C terminal - - - - - - - - - - - - Trans_reg_C HKD3_k127_366751_2 240015.ACP_0767 4.212e-81 279.0 COG0235@1|root,COG0235@2|Bacteria,3Y66P@57723|Acidobacteria,2JNGV@204432|Acidobacteriia 204432|Acidobacteriia G Class II Aldolase and Adducin N-terminal domain - - - - - - - - - - - - Aldolase_II HKD3_k127_3669222_1 1125863.JAFN01000001_gene2253 1.438e-92 314.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2WIT0@28221|Deltaproteobacteria 28221|Deltaproteobacteria T two component, sigma54 specific, transcriptional regulator, Fis family - - - ko:K02481,ko:K07713 ko02020,map02020 M00499 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat HKD3_k127_3669222_6 604331.AUHY01000054_gene1219 1.71e-11 70.0 COG1622@1|root,COG1622@2|Bacteria,1WJJY@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus C cytochrome c oxidase subunit II - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.9.3.1 ko:K02275 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.2,3.D.4.4,3.D.4.6 - - COX2,COX2-transmemb HKD3_k127_3669222_5 866536.Belba_2892 3.647e-12 79.0 COG3637@1|root,COG3637@2|Bacteria,4NE33@976|Bacteroidetes,47NZ9@768503|Cytophagia 976|Bacteroidetes M Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - - - - - - - - - - - HKD3_k127_3669222_8 1286632.P278_08430 1.808e-07 62.0 2DPHC@1|root,32UM4@2|Bacteria,4NT51@976|Bacteroidetes,1I4TT@117743|Flavobacteriia 976|Bacteroidetes - - - - - - - - - - - - - - - HKD3_k127_3669222_0 696369.KI912183_gene427 8.287e-114 394.0 COG0007@1|root,COG1587@1|root,COG0007@2|Bacteria,COG1587@2|Bacteria,1TQNH@1239|Firmicutes,2487I@186801|Clostridia,2602S@186807|Peptococcaceae 186801|Clostridia H Belongs to the precorrin methyltransferase family cobA - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 ko:K02302,ko:K02303,ko:K13542 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R02864,R03165,R03194,R03947 RC00003,RC00871,RC01012,RC01034,RC01861 ko00000,ko00001,ko00002,ko01000 - - iHN637.CLJU_RS15755 HEM4,Porphobil_deam,Porphobil_deamC,TP_methylase HKD3_k127_3669222_3 234267.Acid_2953 3.391e-36 157.0 COG2304@1|root,COG2304@2|Bacteria,3Y7U1@57723|Acidobacteria 2|Bacteria S PFAM von Willebrand factor type A - - - ko:K07114,ko:K12511 - - - - ko00000,ko02000,ko02044 1.A.13.2.2,1.A.13.2.3 - - FHA,VWA,VWA_2 HKD3_k127_3669222_7 234267.Acid_0175 2.131e-10 72.0 COG2304@1|root,COG2304@2|Bacteria,3Y2IE@57723|Acidobacteria 2|Bacteria S PFAM von Willebrand factor type A - - - ko:K07114,ko:K12511 - - - - ko00000,ko02000,ko02044 1.A.13.2.2,1.A.13.2.3 - - FHA,VWA,VWA_2 HKD3_k127_3669222_2 316067.Geob_0462 1.081e-36 143.0 COG0838@1|root,COG0838@2|Bacteria,1RGUT@1224|Proteobacteria,42W9X@68525|delta/epsilon subdivisions,2WSEM@28221|Deltaproteobacteria 28221|Deltaproteobacteria C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoA-1 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.6.5.3 ko:K00330 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q4 HKD3_k127_3669222_4 525904.Tter_1542 1.029e-25 114.0 COG0852@1|root,COG0852@2|Bacteria,2NPN6@2323|unclassified Bacteria 2|Bacteria C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoC GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 ko:K00332 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - iAF987.Gmet_3353 Complex1_30kDa HKD3_k127_3679726_6 926560.KE387023_gene2975 9.383e-49 178.0 COG3752@1|root,COG3752@2|Bacteria 2|Bacteria M Protein of unknown function (DUF1295) - - - - - - - - - - - - DUF1295 HKD3_k127_3679726_3 1388763.O165_028635 1.109e-88 302.0 COG0774@1|root,COG0774@2|Bacteria,1MV6T@1224|Proteobacteria,1RQ72@1236|Gammaproteobacteria,1YWFQ@136845|Pseudomonas putida group 1236|Gammaproteobacteria F Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis lpxC GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0008654,GO:0008759,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.5.1.108 ko:K02535 ko00540,ko01100,map00540,map01100 M00060 R04587 RC00166,RC00300 ko00000,ko00001,ko00002,ko01000,ko01005 - - iECS88_1305.ECS88_0100 LpxC HKD3_k127_3679726_0 338963.Pcar_0087 0.0 1156.0 COG0178@1|root,COG0178@2|Bacteria,1MW0W@1224|Proteobacteria,42M4I@68525|delta/epsilon subdivisions,2WJHM@28221|Deltaproteobacteria,43SBD@69541|Desulfuromonadales 28221|Deltaproteobacteria L ABC transporter uvrA - - ko:K03701 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - ABC_tran HKD3_k127_3679726_1 861299.J421_2138 1.058e-305 956.0 COG1529@1|root,COG1529@2|Bacteria 2|Bacteria C xanthine dehydrogenase activity pucD - - - - - - - - - - - Ald_Xan_dh_C,Ald_Xan_dh_C2 HKD3_k127_3679726_5 502025.Hoch_5970 3.785e-55 200.0 COG2080@1|root,COG2080@2|Bacteria,1MWA6@1224|Proteobacteria,42RRP@68525|delta/epsilon subdivisions,2WP0I@28221|Deltaproteobacteria,2Z3A6@29|Myxococcales 28221|Deltaproteobacteria C [2Fe-2S] binding domain - - 1.2.5.3 ko:K03518,ko:K13483 ko00230,ko01100,ko01120,map00230,map01100,map01120 M00546 R01768,R02103,R11168 RC00143,RC02800 ko00000,ko00001,ko00002,ko01000 - - - Fer2,Fer2_2 HKD3_k127_3679726_2 861299.J421_2140 1.249e-93 327.0 COG1319@1|root,COG1319@2|Bacteria 2|Bacteria C xanthine dehydrogenase activity - - 1.17.1.4 ko:K13479 ko00230,ko01100,ko01120,map00230,map01100,map01120 M00546 R01768,R02103 RC00143 ko00000,ko00001,ko00002,ko01000 - - - CO_deh_flav_C,FAD_binding_5 HKD3_k127_3679726_7 290397.Adeh_3076 1.093e-32 147.0 COG0457@1|root,COG0457@2|Bacteria,1NFQW@1224|Proteobacteria,42MT2@68525|delta/epsilon subdivisions,2WKWA@28221|Deltaproteobacteria 28221|Deltaproteobacteria M Tetratricopeptide TPR_2 repeat protein - - - - - - - - - - - - TPR_1,TPR_11,TPR_16,TPR_2,TPR_4,TPR_8 HKD3_k127_3679726_4 272134.KB731324_gene6505 1.986e-59 217.0 COG1404@1|root,COG2911@1|root,COG2931@1|root,COG3210@1|root,COG1404@2|Bacteria,COG2911@2|Bacteria,COG2931@2|Bacteria,COG3210@2|Bacteria,1G7AR@1117|Cyanobacteria,1HBKR@1150|Oscillatoriales 1117|Cyanobacteria OQ PFAM FG-GAP repeat - - - - - - - - - - - - VCBS HKD3_k127_3683472_4 204669.Acid345_2474 4.422e-66 247.0 COG2911@1|root,COG2911@2|Bacteria,3Y3A6@57723|Acidobacteria,2JHS8@204432|Acidobacteriia 204432|Acidobacteriia M TamB, inner membrane protein subunit of TAM complex - - - ko:K09800 - - - - ko00000,ko02000 - - - TamB HKD3_k127_3683472_1 204669.Acid345_2476 1.069e-74 287.0 COG0729@1|root,COG4775@1|root,COG0729@2|Bacteria,COG4775@2|Bacteria,3Y2RF@57723|Acidobacteria,2JHK5@204432|Acidobacteriia 204432|Acidobacteriia M surface antigen variable number - - - - - - - - - - - - Bac_surface_Ag,POTRA HKD3_k127_3683472_6 1033734.CAET01000004_gene3786 0.0007787 50.0 COG0760@1|root,COG0760@2|Bacteria,1V831@1239|Firmicutes,4HIND@91061|Bacilli,1ZCCR@1386|Bacillus 91061|Bacilli O COG0760 Parvulin-like peptidyl-prolyl isomerase - - - - - - - - - - - - SurA_N_3 HKD3_k127_3683472_5 1128421.JAGA01000002_gene1356 3.776e-07 62.0 COG1807@1|root,COG1807@2|Bacteria 1128421.JAGA01000002_gene1356|- M 4-amino-4-deoxy-L-arabinose transferase activity - - - - - - - - - - - - - HKD3_k127_3683472_0 765420.OSCT_1318 8.464e-79 281.0 COG0438@1|root,COG0438@2|Bacteria,2GABS@200795|Chloroflexi,3752C@32061|Chloroflexia 32061|Chloroflexia M PFAM glycosyl transferase group 1 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 HKD3_k127_3683472_2 326427.Cagg_2212 1.285e-66 252.0 COG0438@1|root,COG0438@2|Bacteria,2GABK@200795|Chloroflexi,374ZN@32061|Chloroflexia 32061|Chloroflexia M PFAM glycosyl transferase group 1 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 HKD3_k127_3683472_3 357808.RoseRS_3471 2.868e-66 236.0 COG0438@1|root,COG0438@2|Bacteria,2GB6D@200795|Chloroflexi,3753H@32061|Chloroflexia 32061|Chloroflexia M PFAM glycosyl transferase group 1 - - - - - - - - - - - - Glyco_trans_1_4,Glyco_transf_4 HKD3_k127_3686904_0 1121904.ARBP01000003_gene6356 2.31e-152 527.0 COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,47JBS@768503|Cytophagia 976|Bacteroidetes T Two component regulator propeller - - - - - - - - - - - - HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y HKD3_k127_3696234_1 402881.Plav_2801 1.901e-48 178.0 COG0537@1|root,COG0537@2|Bacteria,1RDCJ@1224|Proteobacteria,2U956@28211|Alphaproteobacteria,1JP3F@119043|Rhodobiaceae 28211|Alphaproteobacteria FG Scavenger mRNA decapping enzyme C-term binding hit - - ko:K02503 - - - - ko00000,ko04147 - - - HIT HKD3_k127_3696234_0 404589.Anae109_3179 3.543e-100 349.0 COG1752@1|root,COG1752@2|Bacteria,1MUM9@1224|Proteobacteria,42RSN@68525|delta/epsilon subdivisions,2WNDI@28221|Deltaproteobacteria 28221|Deltaproteobacteria T Patatin-like phospholipase - - - ko:K07001 - - - - ko00000 - - - Patatin,cNMP_binding HKD3_k127_3696234_2 493475.GARC_1985 9.924e-13 81.0 COG0845@1|root,COG0845@2|Bacteria 2|Bacteria M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K01993 - - - - ko00000 - - - HlyD_D23 HKD3_k127_3709505_5 1356852.N008_05325 4.052e-88 318.0 COG3292@1|root,COG4585@1|root,COG3292@2|Bacteria,COG4585@2|Bacteria,4NK8Q@976|Bacteroidetes,47KVN@768503|Cytophagia 976|Bacteroidetes T Two component regulator propeller - - - - - - - - - - - - HATPase_c,HisKA_3,Reg_prop,Y_Y_Y HKD3_k127_3709505_12 443144.GM21_3539 3.841e-12 79.0 COG0823@1|root,COG0823@2|Bacteria 2|Bacteria U Involved in the tonB-independent uptake of proteins - - - ko:K03641 - - - - ko00000,ko02000 2.C.1.2 - - Cu_amine_oxidN1,PD40 HKD3_k127_3709505_6 309807.SRU_1440 9.452e-69 245.0 COG2503@1|root,COG2503@2|Bacteria,4NJIJ@976|Bacteroidetes,1FJA7@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes S HAD superfamily, subfamily IIIB (Acid phosphatase) - - - - - - - - - - - - Acid_phosphat_B HKD3_k127_3709505_2 234267.Acid_1380 1.646e-114 381.0 COG1149@1|root,COG1149@2|Bacteria 2|Bacteria C 4 iron, 4 sulfur cluster binding ldpA - - - - - - - - - - - Fer4,Fer4_6,LdpA_C HKD3_k127_3709505_7 861299.J421_2098 3.723e-61 227.0 28M5H@1|root,2ZAJ9@2|Bacteria,1ZUWX@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HKD3_k127_3709505_8 861299.J421_2098 3.409e-55 208.0 28M5H@1|root,2ZAJ9@2|Bacteria,1ZUWX@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HKD3_k127_3709505_9 1123242.JH636434_gene3998 7.266e-47 178.0 COG5036@1|root,COG5036@2|Bacteria,2J00S@203682|Planctomycetes 203682|Planctomycetes P VTC domain - - - - - - - - - - - - VTC HKD3_k127_3709505_10 530564.Psta_3453 2.094e-36 146.0 COG1285@1|root,COG1285@2|Bacteria,2IZY6@203682|Planctomycetes 203682|Planctomycetes S Domain of unknown function (DUF4956) - - - - - - - - - - - - DUF4956 HKD3_k127_3709505_1 865861.AZSU01000002_gene2792 3.346e-149 493.0 COG2414@1|root,COG2414@2|Bacteria,1TPT9@1239|Firmicutes,2481Q@186801|Clostridia,36FZW@31979|Clostridiaceae 186801|Clostridia C Aldehyde ferredoxin oxidoreductase - - 1.2.7.5 ko:K03738 ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200 M00309 R08571 RC00242 ko00000,ko00001,ko00002,ko01000 - - - AFOR_C,AFOR_N HKD3_k127_3709505_4 1077285.AGDG01000008_gene2590 1.27e-95 336.0 2DBP8@1|root,2ZA84@2|Bacteria,4NKHW@976|Bacteroidetes,2FQDJ@200643|Bacteroidia,4APX3@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - HKD3_k127_3709505_0 1121904.ARBP01000005_gene4759 1.145e-169 556.0 COG4225@1|root,COG4225@2|Bacteria,4NG6C@976|Bacteroidetes,47J9H@768503|Cytophagia 976|Bacteroidetes S Heparinase II/III-like protein - - - - - - - - - - - - Hepar_II_III HKD3_k127_3709505_3 742766.HMPREF9455_00169 3.922e-110 364.0 COG1082@1|root,COG2152@1|root,COG1082@2|Bacteria,COG2152@2|Bacteria,4NGDZ@976|Bacteroidetes,2FP8T@200643|Bacteroidia,22VZ2@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 HKD3_k127_3711200_2 316067.Geob_3166 1.463e-22 100.0 28WYN@1|root,33TG0@2|Bacteria,1NTYC@1224|Proteobacteria,42YTU@68525|delta/epsilon subdivisions,2WU4Q@28221|Deltaproteobacteria 28221|Deltaproteobacteria C 6 heme-binding sites - - - - - - - - - - - - - HKD3_k127_3711200_0 316067.Geob_3165 3.823e-98 337.0 COG3391@1|root,COG3391@2|Bacteria,1R7E0@1224|Proteobacteria,42XD8@68525|delta/epsilon subdivisions,2WSJC@28221|Deltaproteobacteria,43VUI@69541|Desulfuromonadales 28221|Deltaproteobacteria S TIGRFAM 40-residue YVTN family beta-propeller repeat - - - - - - - - - - - - Lactonase HKD3_k127_3711200_1 316067.Geob_3164 1.888e-87 308.0 2AIHE@1|root,318Z9@2|Bacteria,1NWQ1@1224|Proteobacteria,42ZTQ@68525|delta/epsilon subdivisions,2WV9Q@28221|Deltaproteobacteria 28221|Deltaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_3711387_3 357808.RoseRS_4181 1.79e-121 400.0 COG0058@1|root,COG0058@2|Bacteria,2G5KG@200795|Chloroflexi,37562@32061|Chloroflexia 32061|Chloroflexia G PFAM glycosyl transferase, family 35 - - 2.4.1.1 ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 - R02111 - ko00000,ko00001,ko01000 - GT35 - DUF3417,Phosphorylase HKD3_k127_3711387_2 661478.OP10G_1068 7.925e-145 471.0 COG1446@1|root,COG1446@2|Bacteria 2|Bacteria E asparaginase asnA2 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.1,3.5.1.26 ko:K01424,ko:K01444,ko:K13051 ko00250,ko00460,ko00511,ko01100,ko01110,ko04142,map00250,map00460,map00511,map01100,map01110,map04142 - R00485 RC00010,RC02798 ko00000,ko00001,ko01000,ko01002 - - - Asparaginase_2 HKD3_k127_3711387_1 886293.Sinac_4604 3.653e-151 487.0 COG3191@1|root,COG3191@2|Bacteria 2|Bacteria EQ aminopeptidase activity dmpA - 3.4.11.19 ko:K01266 - - - - ko00000,ko01000,ko01002 - - - Peptidase_S58 HKD3_k127_3711387_8 497964.CfE428DRAFT_6620 2.906e-63 223.0 COG2360@1|root,COG2360@2|Bacteria,46VHR@74201|Verrucomicrobia 74201|Verrucomicrobia O Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine aat - 2.3.2.6 ko:K00684 - - R03813,R11443,R11444 RC00055,RC00064 ko00000,ko01000 - - - Leu_Phe_trans HKD3_k127_3711387_5 555779.Dthio_PD2148 4.53e-90 312.0 COG2820@1|root,COG2820@2|Bacteria,1PMJ1@1224|Proteobacteria,43792@68525|delta/epsilon subdivisions,2X2CA@28221|Deltaproteobacteria,2MFMY@213115|Desulfovibrionales 28221|Deltaproteobacteria F Phosphorylase superfamily - - 2.4.2.3 ko:K00757 ko00240,ko00983,ko01100,map00240,map00983,map01100 - R01876,R02484,R08229 RC00063 ko00000,ko00001,ko01000 - - - PNP_UDP_1 HKD3_k127_3711387_7 795797.C497_16127 1.43e-65 233.0 COG1234@1|root,arCOG00500@2157|Archaea 2157|Archaea S COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III - - 3.1.26.11 ko:K00784 ko03013,map03013 - - - ko00000,ko00001,ko01000,ko03016 - - - Lactamase_B_2 HKD3_k127_3711387_4 573370.DMR_27750 1.589e-112 380.0 COG1454@1|root,COG1454@2|Bacteria,1MVPH@1224|Proteobacteria,42NP2@68525|delta/epsilon subdivisions,2WIY2@28221|Deltaproteobacteria,2M8N5@213115|Desulfovibrionales 28221|Deltaproteobacteria C PFAM Iron-containing alcohol dehydrogenase - - - - - - - - - - - - Fe-ADH HKD3_k127_3711387_10 452637.Oter_0252 4.657e-37 143.0 COG1359@1|root,COG1359@2|Bacteria 2|Bacteria S Antibiotic biosynthesis monooxygenase lsrG - 5.3.1.32 ko:K11530 ko02024,map02024 - - - ko00000,ko00001,ko01000 - - - ABM HKD3_k127_3711387_12 6238.CBG08811 2.905e-05 52.0 2EW74@1|root,2SY2K@2759|Eukaryota,3AVH6@33154|Opisthokonta,3C40D@33208|Metazoa,3DKPN@33213|Bilateria,40Q8N@6231|Nematoda,1M0JK@119089|Chromadorea,416DZ@6236|Rhabditida 33208|Metazoa - - - - - - - - - - - - - - - HKD3_k127_3711387_9 1232410.KI421413_gene573 8.196e-45 178.0 COG4276@1|root,COG4276@2|Bacteria,1N6EC@1224|Proteobacteria,42U3N@68525|delta/epsilon subdivisions,2WQTN@28221|Deltaproteobacteria,43VBV@69541|Desulfuromonadales 28221|Deltaproteobacteria S Pfam Polyketide cyclase dehydrase and lipid transport - - - - - - - - - - - - Polyketide_cyc HKD3_k127_3711387_6 926550.CLDAP_16210 2.796e-73 255.0 COG0572@1|root,COG0572@2|Bacteria,2G6D5@200795|Chloroflexi 200795|Chloroflexi F Cytidine monophosphokinase udk GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.48 ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 - R00513,R00516,R00517,R00962,R00964,R00967,R00968,R00970,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PRK HKD3_k127_3711387_0 1254432.SCE1572_50330 2.862e-181 573.0 COG0436@1|root,COG0436@2|Bacteria,1MW0Z@1224|Proteobacteria,42N1P@68525|delta/epsilon subdivisions,2WM2V@28221|Deltaproteobacteria,2YU4D@29|Myxococcales 28221|Deltaproteobacteria E Aminotransferase - - 2.6.1.17,2.6.1.88 ko:K14267,ko:K14287 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 M00016 R04475,R08618 RC00006,RC00025 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_1_2 HKD3_k127_3711387_11 1089550.ATTH01000001_gene2430 6.614e-18 98.0 COG1470@1|root,COG1629@1|root,COG1470@2|Bacteria,COG4771@2|Bacteria,4PIBS@976|Bacteroidetes,1FJ71@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes P TonB dependent receptor - - - ko:K02014,ko:K16087 - - - - ko00000,ko02000 1.B.14,1.B.14.2 - - CarboxypepD_reg,Plug,TonB_dep_Rec HKD3_k127_3721267_0 593750.Metfor_2198 4.299e-51 202.0 COG2208@1|root,arCOG02362@1|root,arCOG02362@2157|Archaea,arCOG06893@2157|Archaea,2Y2MD@28890|Euryarchaeota 2157|Archaea T Stage II sporulation protein E - - 3.1.3.3 ko:K07315 - - - - ko00000,ko01000,ko03021 - - - HAMP,SpoIIE,dCache_1 HKD3_k127_373158_1 234267.Acid_6591 1.617e-233 726.0 COG0591@1|root,COG0591@2|Bacteria,3Y4WN@57723|Acidobacteria 57723|Acidobacteria E Sodium:solute symporter family - - - - - - - - - - - - SSF HKD3_k127_373158_8 479433.Caci_8348 3.464e-09 64.0 28T3R@1|root,2ZFCT@2|Bacteria,2GWUG@201174|Actinobacteria 201174|Actinobacteria - - - - - - - - - - - - - - YbjN HKD3_k127_373158_7 479433.Caci_8347 9.238e-59 217.0 COG0265@1|root,COG0265@2|Bacteria 2|Bacteria O serine-type endopeptidase activity htrA GO:0008150,GO:0009266,GO:0009628,GO:0050896 1.3.1.74,3.4.21.107 ko:K04691,ko:K04771,ko:K08070 ko01503,ko02020,map01503,map02020 M00728 - - ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 - - - PDZ_2,Trypsin_2 HKD3_k127_373158_2 927658.AJUM01000024_gene2560 8.329e-233 744.0 COG3669@1|root,COG3669@2|Bacteria,4NE74@976|Bacteroidetes,2FM8D@200643|Bacteroidia,3XJA3@558415|Marinilabiliaceae 976|Bacteroidetes G Alpha-L-fucosidase C-terminal domain - - 3.2.1.51 ko:K01206 ko00511,map00511 - - - ko00000,ko00001,ko01000,ko04147 - GH29 - Alpha_L_fucos,Fucosidase_C HKD3_k127_373158_6 639030.JHVA01000001_gene1905 1.694e-69 251.0 COG2271@1|root,COG2271@2|Bacteria,3Y3NG@57723|Acidobacteria,2JINU@204432|Acidobacteriia 2|Bacteria G Major Facilitator Superfamily - - - ko:K03535 - - - - ko00000,ko02000 2.A.1.14.1 - - MFS_1 HKD3_k127_373158_0 485918.Cpin_5411 4.848e-252 801.0 COG1874@1|root,COG1874@2|Bacteria,4P1ST@976|Bacteroidetes 976|Bacteroidetes G Glycosyl hydrolases family 35 - - 3.2.1.23 ko:K12308 ko00052,map00052 - R01105 RC00452 ko00000,ko00001,ko01000 - - - Glyco_hydro_35 HKD3_k127_373158_4 509635.N824_29015 1.217e-148 515.0 COG3669@1|root,COG3669@2|Bacteria,4NEDX@976|Bacteroidetes,1IQ6C@117747|Sphingobacteriia 976|Bacteroidetes G PFAM coagulation factor 5 8 type fucA - 3.2.1.51 ko:K01206 ko00511,map00511 - - - ko00000,ko00001,ko01000,ko04147 - GH29 - Alpha_L_fucos,F5_F8_type_C HKD3_k127_373158_3 1163617.SCD_n00990 8.218e-162 522.0 COG2081@1|root,COG2081@2|Bacteria,1MUGC@1224|Proteobacteria,2VH8N@28216|Betaproteobacteria 28216|Betaproteobacteria S HI0933 family - - - ko:K07007 - - - - ko00000 - - - HI0933_like HKD3_k127_373158_5 1210884.HG799465_gene12248 1.354e-101 338.0 COG3186@1|root,COG3186@2|Bacteria 2|Bacteria E Phenylalanine-4-hydroxylase phhA GO:0003674,GO:0003824,GO:0004497,GO:0004505,GO:0006082,GO:0006520,GO:0006558,GO:0006559,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009987,GO:0016054,GO:0016491,GO:0016705,GO:0016714,GO:0017144,GO:0019439,GO:0019752,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902221,GO:1902222 1.14.16.1 ko:K00500 ko00360,ko00400,ko00790,ko01100,ko01230,map00360,map00400,map00790,map01100,map01230 - R01795,R07211 RC00490 ko00000,ko00001,ko01000 - - - Biopterin_H HKD3_k127_3747717_0 1288963.ADIS_4367 1.525e-85 292.0 COG0339@1|root,COG0339@2|Bacteria,4NFYA@976|Bacteroidetes,47KDS@768503|Cytophagia 976|Bacteroidetes E PFAM Peptidase family M3 - - 3.4.15.5 ko:K01284 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M3 HKD3_k127_3747717_2 861299.J421_0325 3.751e-27 122.0 COG2227@1|root,COG2227@2|Bacteria 2|Bacteria H 3-demethylubiquinone-9 3-O-methyltransferase activity - - - - - - - - - - - - Methyltransf_25 HKD3_k127_3747717_3 1144275.COCOR_05419 3.375e-26 118.0 COG3509@1|root,COG3509@2|Bacteria,1PI9N@1224|Proteobacteria,439C2@68525|delta/epsilon subdivisions,2X4K6@28221|Deltaproteobacteria,2YVGR@29|Myxococcales 28221|Deltaproteobacteria Q Carbohydrate family 9 binding domain-like - - - - - - - - - - - - CBM9_1 HKD3_k127_3747717_1 1276756.AUEX01000005_gene2844 2.696e-29 120.0 COG0724@1|root,COG0724@2|Bacteria,1N6VR@1224|Proteobacteria,2VR38@28216|Betaproteobacteria,4ADY7@80864|Comamonadaceae 28216|Betaproteobacteria S PFAM RNP-1 like RNA-binding protein - - - - - - - - - - - - RRM_1 HKD3_k127_3756621_1 1379270.AUXF01000001_gene2303 2.776e-162 537.0 COG2304@1|root,COG5426@1|root,COG2304@2|Bacteria,COG5426@2|Bacteria,1ZUB1@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Putative glutamine amidotransferase - - - - - - - - - - - - GATase1_like HKD3_k127_3756621_7 1379270.AUXF01000001_gene2302 9.37e-55 207.0 COG4249@1|root,COG4249@2|Bacteria,1ZUQX@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Peptidase C14 caspase catalytic subunit p20 - - - - - - - - - - - - - HKD3_k127_3756621_6 379066.GAU_3100 2.076e-71 256.0 29X7K@1|root,30IWU@2|Bacteria,1ZUTH@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Domain of unknown function (DUF4159) - - - - - - - - - - - - DUF4159 HKD3_k127_3756621_2 379066.GAU_3101 4.181e-135 438.0 COG0714@1|root,COG0714@2|Bacteria,1ZUSV@142182|Gemmatimonadetes 142182|Gemmatimonadetes S ATPase family associated with various cellular activities (AAA) - - - ko:K03924 - - - - ko00000,ko01000 - - - AAA_3 HKD3_k127_3756621_4 1379270.AUXF01000001_gene2298 6.784e-83 299.0 COG1721@1|root,COG1721@2|Bacteria,1ZUD5@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Protein of unknown function DUF58 - - - - - - - - - - - - DUF58 HKD3_k127_3756621_5 379066.GAU_3103 2.945e-77 286.0 COG1572@1|root,COG2304@1|root,COG1572@2|Bacteria,COG2304@2|Bacteria,1ZUB7@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Aerotolerance regulator N-terminal - - - - - - - - - - - - BatA,VWA_2 HKD3_k127_3756621_0 1379270.AUXF01000001_gene2296 9.736e-184 617.0 COG1196@1|root,COG1196@2|Bacteria,1ZU8V@142182|Gemmatimonadetes 142182|Gemmatimonadetes D nuclear chromosome segregation - - - - - - - - - - - - - HKD3_k127_3756621_11 401053.AciPR4_3113 1.541e-13 78.0 COG0330@1|root,COG0330@2|Bacteria,3Y33E@57723|Acidobacteria,2JHPX@204432|Acidobacteriia 57723|Acidobacteria O SMART band 7 protein - - - - - - - - - - - - Band_7 HKD3_k127_3756621_9 234267.Acid_4104 8.289e-45 181.0 COG0845@1|root,COG0845@2|Bacteria,3Y6UQ@57723|Acidobacteria 57723|Acidobacteria M HlyD family secretion protein - - - - - - - - - - - - - HKD3_k127_3756621_8 1340493.JNIF01000003_gene2327 1.62e-54 209.0 COG0845@1|root,COG0845@2|Bacteria 2|Bacteria M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K02005,ko:K13888 - M00709 - - ko00000,ko00002,ko02000 8.A.1 - - Biotin_lipoyl_2,HlyD_D23,OEP HKD3_k127_3756621_10 234267.Acid_6485 1.025e-34 150.0 COG1566@1|root,COG1566@2|Bacteria 2|Bacteria V PFAM secretion protein HlyD family protein lprD - - ko:K02005,ko:K02022 - - - - ko00000 - - - HlyD_3 HKD3_k127_3756621_3 234267.Acid_6484 6.926e-108 379.0 COG0577@1|root,COG0577@2|Bacteria 2|Bacteria V efflux transmembrane transporter activity macB_1 - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD HKD3_k127_3759689_5 234267.Acid_6192 2.742e-87 314.0 COG0457@1|root,COG0457@2|Bacteria,3Y77J@57723|Acidobacteria 57723|Acidobacteria M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - - - - - - - - - - DUF1736,TPR_11,TPR_16 HKD3_k127_3759689_2 1237149.C900_05550 8.804e-230 740.0 COG1506@1|root,COG1506@2|Bacteria,4NETS@976|Bacteroidetes,47KF8@768503|Cytophagia 976|Bacteroidetes EU Dipeptidyl peptidase IV (DPP IV) N-terminal region - - 3.4.14.5 ko:K01278 ko04974,map04974 - - - ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 - - - DPPIV_N,Peptidase_S9 HKD3_k127_3759689_11 187303.BN69_3199 2.241e-08 62.0 COG4691@1|root,COG4691@2|Bacteria 2|Bacteria S Plasmid stability protein - - - ko:K21495 - - - - ko00000,ko02048 - - - Arc HKD3_k127_3759689_10 552811.Dehly_1047 7.478e-12 72.0 COG0640@1|root,COG1669@1|root,COG0640@2|Bacteria,COG1669@2|Bacteria,2G76P@200795|Chloroflexi 200795|Chloroflexi L PFAM DNA polymerase, beta domain protein region - - - ko:K07075 - - - - ko00000 - - - NTP_transf_2 HKD3_k127_3759689_9 671143.DAMO_3051 1.373e-34 136.0 COG2361@1|root,COG2361@2|Bacteria 2|Bacteria S Protein of unknown function DUF86 - - - - - - - - - - - - DUF86 HKD3_k127_3759689_7 1379270.AUXF01000007_gene963 6.985e-53 204.0 COG0006@1|root,COG0006@2|Bacteria,1ZUQY@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Aminopeptidase P, N-terminal domain - - 3.4.11.9 ko:K01262 - - - - ko00000,ko01000,ko01002 - - - AMP_N,Peptidase_M24 HKD3_k127_3759689_8 243274.THEMA_00315 1.135e-52 196.0 COG1234@1|root,COG1234@2|Bacteria,2GC4E@200918|Thermotogae 200918|Thermotogae S PFAM beta-lactamase domain protein - - 3.1.26.11 ko:K00784 ko03013,map03013 - - - ko00000,ko00001,ko01000,ko03016 - - - Lactamase_B,Lactamase_B_2 HKD3_k127_3759689_3 340099.Teth39_0432 1.511e-155 503.0 COG1115@1|root,COG1115@2|Bacteria,1TNZP@1239|Firmicutes,247S6@186801|Clostridia,42FA0@68295|Thermoanaerobacterales 186801|Clostridia E amino acid carrier protein agcS - - ko:K03310 - - - - ko00000 2.A.25 - - Na_Ala_symp HKD3_k127_3759689_1 861299.J421_6085 4.106e-308 962.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,1ZSND@142182|Gemmatimonadetes 142182|Gemmatimonadetes EU Dienelactone hydrolase family - - - - - - - - - - - - PD40,Peptidase_S9 HKD3_k127_3759689_6 279238.Saro_3068 1.973e-76 274.0 COG1502@1|root,COG1502@2|Bacteria 2|Bacteria I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol - - - ko:K06131 ko00564,ko01100,map00564,map01100 - R07390 RC00017 ko00000,ko00001,ko01000 - - - PLDc_2 HKD3_k127_3759689_0 879212.DespoDRAFT_00867 0.0 1142.0 COG1924@1|root,COG3580@1|root,COG3581@1|root,COG1924@2|Bacteria,COG3580@2|Bacteria,COG3581@2|Bacteria,1PKG6@1224|Proteobacteria,42MY4@68525|delta/epsilon subdivisions,2WJFI@28221|Deltaproteobacteria,2MIP0@213118|Desulfobacterales 68525|delta/epsilon subdivisions I BadF BadG BcrA BcrD - - - - - - - - - - - - BcrAD_BadFG,DUF2229 HKD3_k127_3759689_4 1379270.AUXF01000003_gene3638 2.888e-131 434.0 COG4805@1|root,COG4805@2|Bacteria,1ZUMK@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Bacterial protein of unknown function (DUF885) - - - - - - - - - - - - DUF885 HKD3_k127_3770121_0 1499967.BAYZ01000009_gene5328 2.055e-44 183.0 COG1971@1|root,COG1971@2|Bacteria 2|Bacteria P manganese ion transmembrane transporter activity - - - - - - - - - - - - Mntp HKD3_k127_3773466_2 234267.Acid_7187 3.613e-05 50.0 COG0457@1|root,COG0457@2|Bacteria,3Y3RA@57723|Acidobacteria 57723|Acidobacteria M SMART Tetratricopeptide - - - - - - - - - - - - PMT_2,TPR_1,TPR_11,TPR_16,TPR_17,TPR_2,TPR_8 HKD3_k127_3773466_0 234267.Acid_7005 6.743e-96 353.0 COG1629@1|root,COG4771@2|Bacteria,3Y3HA@57723|Acidobacteria 57723|Acidobacteria P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg,TonB_dep_Rec HKD3_k127_3773466_1 588932.JHOF01000027_gene1613 4.433e-24 103.0 COG2885@1|root,COG2885@2|Bacteria,1RDG7@1224|Proteobacteria,2U8K5@28211|Alphaproteobacteria,2KGIE@204458|Caulobacterales 204458|Caulobacterales M Belongs to the ompA family - - - - - - - - - - - - OmpA HKD3_k127_3779241_0 452637.Oter_1890 8.704e-232 732.0 COG0577@1|root,COG0577@2|Bacteria,46UZM@74201|Verrucomicrobia 74201|Verrucomicrobia V MacB-like periplasmic core domain - - - - - - - - - - - - FtsX,MacB_PCD HKD3_k127_3782123_1 1047013.AQSP01000126_gene2733 8.368e-75 267.0 COG0673@1|root,COG0673@2|Bacteria 2|Bacteria S inositol 2-dehydrogenase activity - - - - - - - - - - - - GFO_IDH_MocA,PmoA HKD3_k127_3782123_0 1047013.AQSP01000126_gene2734 9.667e-277 874.0 COG0383@1|root,COG0383@2|Bacteria,2NQ98@2323|unclassified Bacteria 2|Bacteria G Alpha mannosidase, middle domain - - 3.2.1.24 ko:K01191 ko00511,map00511 - - - ko00000,ko00001,ko01000,ko04131 - GH38 - Alpha-mann_mid,Glyco_hydro_38,Glyco_hydro_38C HKD3_k127_3782123_2 572478.Vdis_0367 7.172e-06 58.0 COG3387@1|root,arCOG03285@2157|Archaea,2XRPP@28889|Crenarchaeota 28889|Crenarchaeota G Glucoamylase - - - - - - - - - - - - Glyco_hydro_15 HKD3_k127_3800075_1 379066.GAU_2808 4.24e-09 64.0 2FCBU@1|root,344FF@2|Bacteria,1ZU39@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HKD3_k127_3800075_0 861299.J421_4478 1.261e-66 237.0 COG1574@1|root,COG1574@2|Bacteria,1ZU9S@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Amidohydrolase family - - - - - - - - - - - - Amidohydro_3 HKD3_k127_3802247_9 243231.GSU2665 1.286e-39 156.0 COG0845@1|root,COG0845@2|Bacteria,1MX0G@1224|Proteobacteria,42RBE@68525|delta/epsilon subdivisions,2WN7J@28221|Deltaproteobacteria 28221|Deltaproteobacteria M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 HKD3_k127_3802247_10 398767.Glov_0167 7.527e-33 148.0 COG1309@1|root,COG1309@2|Bacteria,1NM2A@1224|Proteobacteria,42XG6@68525|delta/epsilon subdivisions,2WT4U@28221|Deltaproteobacteria 28221|Deltaproteobacteria K Bacterial regulatory proteins, tetR family - - - - - - - - - - - - TetR_N HKD3_k127_3802247_13 1121920.AUAU01000017_gene1225 8.157e-17 86.0 COG0748@1|root,COG0748@2|Bacteria,3Y2Q3@57723|Acidobacteria 57723|Acidobacteria P Pyridoxamine 5'-phosphate oxidase - - - ko:K07226 - - - - ko00000 - - - DUF2470,Pyrid_oxidase_2 HKD3_k127_3802247_4 1267535.KB906767_gene4776 6.634e-64 240.0 COG2197@1|root,COG2197@2|Bacteria,3Y6T2@57723|Acidobacteria,2JMQ5@204432|Acidobacteriia 204432|Acidobacteriia T PFAM Response regulator receiver domain - - - - - - - - - - - - GerE,Response_reg HKD3_k127_3802247_8 765420.OSCT_1462 1.726e-40 168.0 COG4585@1|root,COG4585@2|Bacteria,2G8KS@200795|Chloroflexi 200795|Chloroflexi T Histidine kinase-like ATPases - - - - - - - - - - - - GAF_2,HATPase_c,HisKA_3,PAS_3,PAS_9 HKD3_k127_3802247_1 671143.DAMO_1541 6.039e-146 473.0 COG1215@1|root,COG1215@2|Bacteria,2NNSB@2323|unclassified Bacteria 2|Bacteria M transferase activity, transferring glycosyl groups gpgS - 2.4.1.266 ko:K13693 - - - - ko00000,ko01000,ko01003 - GT81 - - HKD3_k127_3802247_5 671143.DAMO_1540 6.314e-60 217.0 COG3769@1|root,COG3769@2|Bacteria,2NR7G@2323|unclassified Bacteria 2|Bacteria S haloacid dehalogenase-like hydrolase mpgP GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050897 2.4.1.217,3.1.3.70 ko:K05947,ko:K07026 ko00051,map00051 - R05768,R05790 RC00005,RC00017,RC00397,RC02748 ko00000,ko00001,ko01000,ko01003 - - - Hydrolase_3 HKD3_k127_3802247_0 909663.KI867151_gene3008 8.164e-152 494.0 COG0463@1|root,COG0463@2|Bacteria,1R547@1224|Proteobacteria,42PDC@68525|delta/epsilon subdivisions,2WKYW@28221|Deltaproteobacteria,2MR35@213462|Syntrophobacterales 28221|Deltaproteobacteria M glycosyl transferase family 2 - - 2.4.1.268 ko:K21349 - - - - ko00000,ko01000 - GT81 - Glycos_transf_2 HKD3_k127_3802247_12 290397.Adeh_3000 1.007e-19 98.0 COG0668@1|root,COG0668@2|Bacteria,1N2GE@1224|Proteobacteria,42XYJ@68525|delta/epsilon subdivisions,2WSKT@28221|Deltaproteobacteria 28221|Deltaproteobacteria M PFAM Conserved TM helix repeat-containing protein - - - - - - - - - - - - TM_helix HKD3_k127_3802247_2 192952.MM_3198 2.39e-124 413.0 COG1073@1|root,arCOG01661@2157|Archaea,2XVIC@28890|Euryarchaeota,2NANZ@224756|Methanomicrobia 224756|Methanomicrobia S Alpha/beta hydrolase family - - - ko:K06889 - - - - ko00000 - - - Peptidase_S9 HKD3_k127_3802247_14 1278078.G419_06592 2.17e-13 83.0 COG1188@1|root,COG1188@2|Bacteria,2IQ6F@201174|Actinobacteria,4G239@85025|Nocardiaceae 201174|Actinobacteria J Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit S4 paralog hslR - - ko:K04762 - - - - ko00000,ko03110 - - - S4 HKD3_k127_3802247_7 378806.STAUR_2821 3.569e-42 162.0 COG0127@1|root,COG0127@2|Bacteria,1MUK5@1224|Proteobacteria,42NGT@68525|delta/epsilon subdivisions,2WK3E@28221|Deltaproteobacteria,2YVIB@29|Myxococcales 28221|Deltaproteobacteria F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions rdgB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 ko:K02428 ko00230,map00230 - R00426,R00720,R01855,R02100,R02720,R03531 RC00002 ko00000,ko00001,ko01000 - - iAF987.Gmet_1875 Ham1p_like HKD3_k127_3802247_3 696281.Desru_0932 8.422e-93 314.0 COG0689@1|root,COG0689@2|Bacteria,1TQM3@1239|Firmicutes,25E5P@186801|Clostridia,26123@186807|Peptococcaceae 186801|Clostridia J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates rph - 2.7.7.56,3.6.1.66 ko:K00989,ko:K02428 ko00230,map00230 - R00426,R00720,R01855,R02100,R02720,R03531 RC00002 ko00000,ko00001,ko01000,ko03016 - - - Ham1p_like,RNase_PH,RNase_PH_C HKD3_k127_3802247_11 56780.SYN_01917 9.176e-21 102.0 COG5401@1|root,COG5401@2|Bacteria,1Q1JB@1224|Proteobacteria,437B0@68525|delta/epsilon subdivisions,2X2FP@28221|Deltaproteobacteria,2MSEV@213462|Syntrophobacterales 28221|Deltaproteobacteria S Sporulation and spore germination - - - - - - - - - - - - Germane HKD3_k127_3802247_6 1047013.AQSP01000139_gene2398 4.15e-44 178.0 COG0860@1|root,COG0860@2|Bacteria,2NPCZ@2323|unclassified Bacteria 2|Bacteria M Ami_3 lytC_1 - 3.5.1.28 ko:K01448 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 - - - Amidase_3,SH3_3,SLH HKD3_k127_3803843_1 383372.Rcas_0264 7.68e-135 453.0 COG5184@1|root,COG5184@2|Bacteria,2G8WU@200795|Chloroflexi,3765G@32061|Chloroflexia 32061|Chloroflexia DZ PFAM regulator of chromosome condensation, RCC1 - - - - - - - - - - - - - HKD3_k127_3803843_2 215803.DB30_5952 1.442e-67 235.0 COG4636@1|root,COG4636@2|Bacteria,1RCFH@1224|Proteobacteria,437EF@68525|delta/epsilon subdivisions,2X2KT@28221|Deltaproteobacteria,2Z042@29|Myxococcales 28221|Deltaproteobacteria S Putative restriction endonuclease - - - - - - - - - - - - Uma2 HKD3_k127_3803843_0 234267.Acid_4393 6.975e-142 473.0 COG0515@1|root,COG0515@2|Bacteria 234267.Acid_4393|- KLT protein kinase activity - - - - - - - - - - - - - HKD3_k127_3818721_7 234267.Acid_3960 2.166e-24 104.0 COG0111@1|root,COG0111@2|Bacteria,3Y7TQ@57723|Acidobacteria 57723|Acidobacteria EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding - - 1.1.1.399,1.1.1.95 ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R01513 RC00031 ko00000,ko00001,ko00002,ko01000,ko04147 - - - 2-Hacid_dh,2-Hacid_dh_C HKD3_k127_3818721_1 1191523.MROS_0721 2.834e-137 451.0 COG1932@1|root,COG1932@2|Bacteria 2|Bacteria E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine serC GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 M00020,M00124 R04173,R05085 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_5 HKD3_k127_3818721_9 616991.JPOO01000003_gene142 5.388e-15 78.0 2E9FG@1|root,333NU@2|Bacteria,4NXF1@976|Bacteroidetes,1IAS7@117743|Flavobacteriia,23HFB@178469|Arenibacter 976|Bacteroidetes - - - - - - - - - - - - - - MtN3_slv HKD3_k127_3818721_6 375286.mma_2596 5.426e-82 283.0 COG0288@1|root,COG0288@2|Bacteria,1NGFN@1224|Proteobacteria,2VUIT@28216|Betaproteobacteria,476WJ@75682|Oxalobacteraceae 28216|Betaproteobacteria H Reversible hydration of carbon dioxide - - 4.2.1.1 ko:K01673 ko00910,map00910 - R00132,R10092 RC02807 ko00000,ko00001,ko01000 - - - Pro_CA HKD3_k127_3818721_3 861299.J421_5631 1.211e-120 394.0 2BZ6M@1|root,2Z7HW@2|Bacteria 2|Bacteria S InterPro IPR010496 - - - - - - - - - - - - DUF1080 HKD3_k127_3818721_8 1384056.N787_11340 2.106e-20 104.0 COG1359@1|root,COG1359@2|Bacteria 2|Bacteria S Antibiotic biosynthesis monooxygenase yphI - 1.14.99.57 ko:K06996,ko:K21481 - - - - ko00000,ko01000 - - - ABM HKD3_k127_3818721_5 1122194.AUHU01000007_gene92 7.412e-98 330.0 COG3507@1|root,COG3507@2|Bacteria,1R10E@1224|Proteobacteria 1224|Proteobacteria G Belongs to the glycosyl hydrolase 43 family - - - - - - - - - - - - Glyco_hydro_43 HKD3_k127_3818721_2 1379270.AUXF01000007_gene1012 3.417e-121 412.0 COG4447@1|root,COG4447@2|Bacteria 2|Bacteria S cellulose binding - - - - - - - - - - - - BNR,Sortilin-Vps10 HKD3_k127_3818721_10 1197130.BAFM01000006_gene1329 4.338e-05 53.0 COG1487@1|root,arCOG02219@2157|Archaea,2XX7I@28890|Euryarchaeota,23VMN@183963|Halobacteria 183963|Halobacteria V Toxic component of a toxin-antitoxin (TA) module. An RNase - - - ko:K18828 - - - - ko00000,ko01000,ko02048,ko03016 - - - PIN HKD3_k127_3818721_0 880073.Calab_0633 7.252e-201 633.0 COG2403@1|root,COG2403@2|Bacteria,2NNTB@2323|unclassified Bacteria 2|Bacteria S cyclic 2,3-diphosphoglycerate synthetase activity cpgS - - ko:K05716 - - R03298 RC00900 ko00000,ko01000 - - - cobW HKD3_k127_3818721_4 204669.Acid345_1822 1.047e-103 340.0 COG4992@1|root,COG4992@2|Bacteria,3Y40B@57723|Acidobacteria,2JHYT@204432|Acidobacteriia 204432|Acidobacteriia E TIGRFAM ornithine aminotransferase - - 2.6.1.13 ko:K00819 ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130 - R00667 RC00006,RC00062 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_3 HKD3_k127_3820651_1 1122604.JONR01000001_gene1749 1.182e-66 240.0 COG3832@1|root,COG4978@1|root,COG3832@2|Bacteria,COG4978@2|Bacteria,1RDMX@1224|Proteobacteria,1S914@1236|Gammaproteobacteria,1XC1N@135614|Xanthomonadales 135614|Xanthomonadales KT Polyketide cyclase / dehydrase and lipid transport - - - - - - - - - - - - GyrI-like,Polyketide_cyc2 HKD3_k127_3820651_0 1382306.JNIM01000001_gene3093 2.562e-143 474.0 COG0318@1|root,COG0318@2|Bacteria,2G5K4@200795|Chloroflexi 200795|Chloroflexi IQ PFAM AMP-dependent synthetase and ligase - - - ko:K00666 - - - - ko00000,ko01000,ko01004 - - - AMP-binding,AMP-binding_C HKD3_k127_3820651_2 483219.LILAB_24175 1.747e-20 100.0 COG2267@1|root,COG2267@2|Bacteria,1QW7I@1224|Proteobacteria,43AJ9@68525|delta/epsilon subdivisions,2X5ZK@28221|Deltaproteobacteria,2Z1Z0@29|Myxococcales 28221|Deltaproteobacteria I TAP-like protein - - - - - - - - - - - - Abhydrolase_1,Abhydrolase_4 HKD3_k127_3821431_2 246194.CHY_1575 9.023e-54 195.0 COG0168@1|root,COG0168@2|Bacteria,1TQ4S@1239|Firmicutes,247Q3@186801|Clostridia,42ESC@68295|Thermoanaerobacterales 186801|Clostridia P TIGRFAM potassium uptake protein, TrkH family ktrB - - ko:K03498 - - - - ko00000,ko02000 2.A.38.1,2.A.38.4 - - TrkH HKD3_k127_3821431_3 861299.J421_3591 1.108e-46 177.0 COG1028@1|root,COG1028@2|Bacteria,1ZTNC@142182|Gemmatimonadetes 142182|Gemmatimonadetes IQ KR domain - - 1.5.1.33 ko:K03793 - - - - ko00000,ko01000 - - - adh_short_C2 HKD3_k127_3821431_0 861299.J421_0324 2.428e-69 251.0 COG0436@1|root,COG0436@2|Bacteria 2|Bacteria E Aminotransferase - - 2.6.1.1 ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 - R00355,R00694,R00734,R00896,R02433,R02619,R05052 RC00006 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 HKD3_k127_3821431_1 309801.trd_1612 4.099e-67 241.0 COG2515@1|root,COG2515@2|Bacteria,2G6PX@200795|Chloroflexi,27YZ5@189775|Thermomicrobia 189775|Thermomicrobia E Pyridoxal-phosphate dependent enzyme - - 4.4.1.15 ko:K05396 ko00270,map00270 - R01874 RC00382 ko00000,ko00001,ko01000 - - - PALP HKD3_k127_3821431_4 1280944.HY17_10310 2.933e-29 131.0 COG1236@1|root,COG1236@2|Bacteria,1MUDD@1224|Proteobacteria,2TVFM@28211|Alphaproteobacteria 28211|Alphaproteobacteria J exonuclease of the beta-lactamase fold involved in RNA processing - - - ko:K07576 - - - - ko00000 - - - Beta-Casp,Lactamase_B,RMMBL HKD3_k127_3822679_4 1047013.AQSP01000043_gene53 1.756e-05 47.0 COG0217@1|root,COG0217@2|Bacteria,2NNSI@2323|unclassified Bacteria 2|Bacteria K Transcriptional regulatory protein yebC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - - - - - - - - - - Transcrip_reg HKD3_k127_3822679_2 509191.AEDB02000103_gene3772 6.534e-44 167.0 COG0817@1|root,COG0817@2|Bacteria,1V3N9@1239|Firmicutes,24HMI@186801|Clostridia,3WIS5@541000|Ruminococcaceae 186801|Clostridia L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group ruvC - 3.1.22.4 ko:K01159 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - RuvC HKD3_k127_3822679_1 234267.Acid_0956 1.643e-50 195.0 COG0632@1|root,COG0632@2|Bacteria,3Y4KI@57723|Acidobacteria 57723|Acidobacteria L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB ruvA - 3.6.4.12 ko:K03550 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - HHH_5,RuvA_C,RuvA_N HKD3_k127_3822679_0 1005048.CFU_0710 1.308e-139 451.0 COG2255@1|root,COG2255@2|Bacteria,1MU38@1224|Proteobacteria,2VH0J@28216|Betaproteobacteria,473CR@75682|Oxalobacteraceae 28216|Betaproteobacteria L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing ruvB - 3.6.4.12 ko:K03551 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - RuvB_C,RuvB_N HKD3_k127_3822679_3 926566.Terro_0959 4.852e-36 158.0 COG0332@1|root,COG0332@2|Bacteria,3Y2Z5@57723|Acidobacteria,2JIAW@204432|Acidobacteriia 204432|Acidobacteriia I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids fabH - 2.3.1.180 ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00082,M00083 R10707 RC00004,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - ACP_syn_III,ACP_syn_III_C HKD3_k127_3829314_4 1121918.ARWE01000001_gene1136 2.383e-61 216.0 COG3005@1|root,COG3005@2|Bacteria,1QYGG@1224|Proteobacteria,42NFU@68525|delta/epsilon subdivisions,2WKHN@28221|Deltaproteobacteria,43UCU@69541|Desulfuromonadales 28221|Deltaproteobacteria C Doubled CXXCH motif (Paired_CXXCH_1) - - - - - - - - - - - - Paired_CXXCH_1 HKD3_k127_3829314_0 316067.Geob_3159 5.526e-156 506.0 COG3043@1|root,COG3043@2|Bacteria,1RG8Q@1224|Proteobacteria,42S2W@68525|delta/epsilon subdivisions,2WNP8@28221|Deltaproteobacteria,43V2D@69541|Desulfuromonadales 28221|Deltaproteobacteria C Doubled CXXCH motif (Paired_CXXCH_1) pccJ - - - - - - - - - - - Paired_CXXCH_1 HKD3_k127_3829314_3 243231.GSU2493 7.805e-64 231.0 COG3391@1|root,COG3391@2|Bacteria,1NUYI@1224|Proteobacteria,42ZRG@68525|delta/epsilon subdivisions,2WV3C@28221|Deltaproteobacteria 28221|Deltaproteobacteria S amine dehydrogenase activity - - - - - - - - - - - - NHL HKD3_k127_3829314_2 404589.Anae109_2067 2.884e-66 248.0 COG0457@1|root,COG0457@2|Bacteria,1PFUI@1224|Proteobacteria,42W2K@68525|delta/epsilon subdivisions,2WRN3@28221|Deltaproteobacteria 404589.Anae109_2067|- S TPR repeat-containing protein - - - - - - - - - - - - - HKD3_k127_3829314_6 371731.Rsw2DRAFT_2582 0.0006577 50.0 COG0642@1|root,COG0784@1|root,COG2198@1|root,COG0784@2|Bacteria,COG2198@2|Bacteria,COG2205@2|Bacteria,1R5C7@1224|Proteobacteria,2TS7V@28211|Alphaproteobacteria,1FCGD@1060|Rhodobacter 28211|Alphaproteobacteria T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c,Response_reg HKD3_k127_3829314_1 443143.GM18_0320 7.217e-128 426.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2WKJX@28221|Deltaproteobacteria,43S25@69541|Desulfuromonadales 28221|Deltaproteobacteria T Domains REC, sigma54 interaction, HTH8 - - - - - - - - - - - - HTH_8,Response_reg,Sigma54_activat HKD3_k127_3829314_5 290397.Adeh_0503 2.062e-19 89.0 COG0642@1|root,COG2205@2|Bacteria 290397.Adeh_0503|- T PhoQ Sensor - - - - - - - - - - - - - HKD3_k127_3829700_25 1121423.JONT01000028_gene669 0.0006629 48.0 COG0823@1|root,COG3291@1|root,COG4254@1|root,COG0823@2|Bacteria,COG3291@2|Bacteria,COG4254@2|Bacteria 2|Bacteria UW PFAM FecR protein - - 3.4.24.3 ko:K01387 - - - - ko00000,ko01000,ko01002,ko02042 - - - DUF5050,FecR,PKD,Peptidase_M9 HKD3_k127_3829700_20 1047013.AQSP01000122_gene2228 4.452e-08 57.0 294GU@1|root,2ZRWK@2|Bacteria,2NRXQ@2323|unclassified Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_3829700_0 1047013.AQSP01000122_gene2229 8.007e-218 707.0 COG2192@1|root,COG2192@2|Bacteria,2NNRR@2323|unclassified Bacteria 2|Bacteria O Carbamoyltransferase C-terminus - - - ko:K00612 - - - - ko00000,ko01000 - - - Carbam_trans_C,Carbam_trans_N HKD3_k127_3829700_4 870187.Thini_3469 1.346e-83 310.0 COG0500@1|root,COG2226@2|Bacteria 2|Bacteria Q methyltransferase - - - - - - - - - - - - Methyltransf_11,Methyltransf_25,Methyltransf_31 HKD3_k127_3829700_23 1057002.KB905370_gene3667 4.904e-06 60.0 28PFV@1|root,2ZC6X@2|Bacteria,1RBB6@1224|Proteobacteria,2U6AX@28211|Alphaproteobacteria,4BDBU@82115|Rhizobiaceae 28211|Alphaproteobacteria - - - - - - - - - - - - - - Lipase_GDSL_2 HKD3_k127_3829700_24 1210884.HG799464_gene10957 7.287e-05 54.0 COG1413@1|root,COG1413@2|Bacteria,2J011@203682|Planctomycetes 203682|Planctomycetes C E-Z type HEAT repeats - - - - - - - - - - - - HEAT_2 HKD3_k127_3829700_11 194439.CT0273 7.763e-29 134.0 COG2244@1|root,COG2244@2|Bacteria,1FD8T@1090|Chlorobi 1090|Chlorobi S Polysaccharide biosynthesis protein - - - - - - - - - - - - Polysacc_synt,Polysacc_synt_C HKD3_k127_3829700_7 565033.GACE_0916 5.433e-60 231.0 COG1032@1|root,arCOG01356@2157|Archaea,2XU04@28890|Euryarchaeota,245XG@183980|Archaeoglobi 183980|Archaeoglobi C SMART Elongator protein 3 MiaB NifB - - - - - - - - - - - - B12-binding,Radical_SAM HKD3_k127_3829700_6 529709.PYCH_15050 5.221e-60 217.0 COG0463@1|root,arCOG00894@2157|Archaea,2XWXA@28890|Euryarchaeota,242RY@183968|Thermococci 183968|Thermococci M GtrA-like protein - - 2.4.1.83 ko:K00721 ko00510,ko01100,map00510,map01100 - R01009 RC00005 ko00000,ko00001,ko01000,ko01003 - GT2 - Glycos_transf_2,GtrA HKD3_k127_3829700_17 1192034.CAP_8903 2.964e-15 89.0 2DY49@1|root,3482V@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_3829700_18 1499967.BAYZ01000090_gene4941 8.025e-15 89.0 2DDA6@1|root,2ZH98@2|Bacteria 2|Bacteria S Dolichyl-phosphate-mannose-protein mannosyltransferase - - - - - - - - - - - - PMT HKD3_k127_3829700_19 443143.GM18_2487 1.65e-14 87.0 COG3014@1|root,COG3014@2|Bacteria 2|Bacteria S protein conserved in bacteria - - - - - - - - - - - - PMT_2 HKD3_k127_3829700_12 237368.SCABRO_03406 5.154e-26 123.0 COG0535@1|root,COG0535@2|Bacteria 2|Bacteria I radical SAM domain protein - - - - - - - - - - - - Fer4_12,Fer4_14,Radical_SAM,SPASM HKD3_k127_3829700_1 497964.CfE428DRAFT_2531 3.322e-157 528.0 COG1216@1|root,COG4976@1|root,COG1216@2|Bacteria,COG4976@2|Bacteria,46W0C@74201|Verrucomicrobia 74201|Verrucomicrobia S Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 HKD3_k127_3829700_2 1128421.JAGA01000003_gene3091 2.41e-146 496.0 COG4485@1|root,COG4485@2|Bacteria,2NP78@2323|unclassified Bacteria 2|Bacteria S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - YfhO HKD3_k127_3829700_8 290397.Adeh_4091 2.744e-43 176.0 2CHM7@1|root,2ZV0T@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_3829700_15 470704.XP_007754828.1 1.937e-17 92.0 COG0500@1|root,KOG1269@2759|Eukaryota,38FGK@33154|Opisthokonta,3NYCG@4751|Fungi,3QX15@4890|Ascomycota,20SQ0@147545|Eurotiomycetes 4751|Fungi I Putative S-adenosyl-L-methionine-dependent methyltransferase - - - - - - - - - - - - Methyltransf_31 HKD3_k127_3829700_10 1121033.AUCF01000004_gene5071 4.757e-35 147.0 COG1247@1|root,COG1247@2|Bacteria 2|Bacteria M phosphinothricin N-acetyltransferase activity - - - - - - - - - - - - Acetyltransf_1,Acetyltransf_10,Acetyltransf_7 HKD3_k127_3829700_9 880073.Calab_2316 7.586e-43 179.0 COG0726@1|root,COG0726@2|Bacteria,2NRRE@2323|unclassified Bacteria 2|Bacteria G polysaccharide deacetylase walW - - - - - - - - - - - - HKD3_k127_3829700_14 304371.MCP_0143 9.794e-21 105.0 COG0438@1|root,arCOG01403@2157|Archaea,2XTRH@28890|Euryarchaeota,2N9R4@224756|Methanomicrobia 224756|Methanomicrobia M Glycosyl transferase 4-like - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 HKD3_k127_3829700_16 868595.Desca_1954 4.219e-16 87.0 COG0500@1|root,COG0500@2|Bacteria,1VJS9@1239|Firmicutes,24TBM@186801|Clostridia 186801|Clostridia Q PFAM Methyltransferase type 11 - - - - - - - - - - - - Methyltransf_11 HKD3_k127_3829700_22 326427.Cagg_1851 8.526e-07 62.0 COG1807@1|root,COG1807@2|Bacteria,2GBKC@200795|Chloroflexi,376Q4@32061|Chloroflexia 32061|Chloroflexia M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - - - - - - - - - - - HKD3_k127_3829700_13 246197.MXAN_5202 7.44e-26 115.0 COG1610@1|root,COG1610@2|Bacteria,1RGZS@1224|Proteobacteria,42SH8@68525|delta/epsilon subdivisions,2WQ3S@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Yqey-like protein yqeY - - ko:K09117 - - - - ko00000 - - - YqeY HKD3_k127_3829700_3 880072.Desac_2552 6.004e-87 300.0 COG0728@1|root,COG0728@2|Bacteria,1MUH0@1224|Proteobacteria,42M28@68525|delta/epsilon subdivisions,2WJPF@28221|Deltaproteobacteria,2MQKP@213462|Syntrophobacterales 28221|Deltaproteobacteria S Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane murJ - - ko:K03980 - - - - ko00000,ko01011,ko02000 2.A.66.4 - - MVIN HKD3_k127_3832577_1 1267533.KB906733_gene3362 7.39e-41 170.0 COG0457@1|root,COG3710@1|root,COG5616@1|root,COG0457@2|Bacteria,COG3710@2|Bacteria,COG5616@2|Bacteria,3Y7E7@57723|Acidobacteria,2JKGS@204432|Acidobacteriia 204432|Acidobacteriia K Transcriptional regulatory protein, C terminal - - - - - - - - - - - - Trans_reg_C HKD3_k127_3832577_2 767817.Desgi_1265 1.723e-34 141.0 COG1595@1|root,COG1595@2|Bacteria,1TS3M@1239|Firmicutes,24IW2@186801|Clostridia,262RV@186807|Peptococcaceae 186801|Clostridia K Belongs to the sigma-70 factor family. ECF subfamily algU - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 HKD3_k127_3832577_0 443143.GM18_3663 3.625e-106 354.0 COG0488@1|root,COG0488@2|Bacteria,1MU37@1224|Proteobacteria,42M2A@68525|delta/epsilon subdivisions,2WIJY@28221|Deltaproteobacteria,43TDR@69541|Desulfuromonadales 28221|Deltaproteobacteria S PFAM ABC transporter related - - - ko:K06158 - - - - ko00000,ko03012 - - - ABC_tran,ABC_tran_CTD,ABC_tran_Xtn HKD3_k127_3841881_0 234267.Acid_2734 0.0 1039.0 COG1629@1|root,COG4771@2|Bacteria,3Y2WI@57723|Acidobacteria 57723|Acidobacteria P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg,Plug HKD3_k127_3841881_4 861299.J421_0382 3.824e-118 393.0 COG1940@1|root,COG1940@2|Bacteria,1ZV0J@142182|Gemmatimonadetes 142182|Gemmatimonadetes GK ROK family - - - - - - - - - - - - ROK HKD3_k127_3841881_8 743719.PaelaDRAFT_2935 2.298e-69 243.0 COG1028@1|root,COG1028@2|Bacteria,1TSNP@1239|Firmicutes,4IPV4@91061|Bacilli,26RT2@186822|Paenibacillaceae 91061|Bacilli IQ KR domain - - 1.1.1.100 ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short_C2 HKD3_k127_3841881_2 518766.Rmar_1170 5.566e-132 436.0 COG2271@1|root,COG2271@2|Bacteria,4NE7R@976|Bacteroidetes 976|Bacteroidetes G Major Facilitator exuT - - ko:K08191 - - - - ko00000,ko02000 2.A.1.14.2 - - MFS_1 HKD3_k127_3841881_12 223926.28809277 5.752e-32 128.0 2E4R1@1|root,32ZJK@2|Bacteria,1N8FZ@1224|Proteobacteria,1SAJ2@1236|Gammaproteobacteria,1XXUY@135623|Vibrionales 135623|Vibrionales S Nitrous oxide-stimulated promoter - - - - - - - - - - - - YgbA_NO HKD3_k127_3841881_13 456442.Mboo_2313 2.589e-09 69.0 COG5485@1|root,arCOG06513@2157|Archaea,2Y3E5@28890|Euryarchaeota 28890|Euryarchaeota S SnoaL-like polyketide cyclase - - - - - - - - - - - - SnoaL HKD3_k127_3841881_7 1123242.JH636434_gene5302 1.542e-95 331.0 COG1520@1|root,COG1520@2|Bacteria,2IYRB@203682|Planctomycetes 1123242.JH636434_gene5302|- S beta-propeller repeat - - - - - - - - - - - - - HKD3_k127_3841881_5 336407.RBE_0383 1.294e-116 387.0 COG1373@1|root,COG1373@2|Bacteria,1NQGE@1224|Proteobacteria 1224|Proteobacteria S Domain of unknown function (DUF4143) - - - - - - - - - - - - AAA_14,DUF4143 HKD3_k127_3841881_6 1122611.KB903952_gene6150 1.603e-98 325.0 COG0225@1|root,COG0225@2|Bacteria,2GJ1S@201174|Actinobacteria,4EFI4@85012|Streptosporangiales 201174|Actinobacteria O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine msrA - 1.8.4.11 ko:K07304 - - - - ko00000,ko01000 - - - PMSR HKD3_k127_3841881_9 404589.Anae109_1741 4.127e-69 248.0 COG2606@1|root,COG2606@2|Bacteria,1RGX5@1224|Proteobacteria,42RNH@68525|delta/epsilon subdivisions,2X5NY@28221|Deltaproteobacteria,2Z0TQ@29|Myxococcales 28221|Deltaproteobacteria H Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily - - - ko:K03976 - - - - ko00000,ko01000,ko03016 - - - tRNA_edit HKD3_k127_3841881_10 234267.Acid_1760 1.281e-61 217.0 COG0566@1|root,COG0566@2|Bacteria,3Y4WG@57723|Acidobacteria 57723|Acidobacteria J SpoU rRNA Methylase family - - - - - - - - - - - - SpoU_methylase HKD3_k127_3841881_14 794903.OPIT5_05610 2.454e-05 50.0 28X6Y@1|root,2ZJ59@2|Bacteria,46WIZ@74201|Verrucomicrobia,3K8DC@414999|Opitutae 414999|Opitutae - - - - - - - - - - - - - - - HKD3_k127_3841881_1 1123508.JH636439_gene1738 2.038e-180 581.0 COG2252@1|root,COG2252@2|Bacteria 2|Bacteria S purine nucleobase transmembrane transporter activity yicO - - ko:K06901 - - - - ko00000,ko02000 2.A.1.40 - - Xan_ur_permease HKD3_k127_3841881_3 243231.GSU1723 2.67e-119 404.0 COG0668@1|root,COG0668@2|Bacteria,1N66N@1224|Proteobacteria,42MXP@68525|delta/epsilon subdivisions,2WMI1@28221|Deltaproteobacteria,43S3A@69541|Desulfuromonadales 28221|Deltaproteobacteria M Mechanosensitive ion channel - - - - - - - - - - - - MS_channel HKD3_k127_3841881_11 215803.DB30_0967 5.328e-33 129.0 COG0174@1|root,COG0174@2|Bacteria,1MU6V@1224|Proteobacteria,43BWY@68525|delta/epsilon subdivisions,2X77Q@28221|Deltaproteobacteria,2YXSH@29|Myxococcales 28221|Deltaproteobacteria E Glutamine synthetase, beta-Grasp domain glnA - 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 - R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 - - - Gln-synt_C,Gln-synt_N HKD3_k127_3856254_3 1047013.AQSP01000139_gene2329 5.323e-155 525.0 COG2091@1|root,COG2091@2|Bacteria 2|Bacteria H lysine biosynthetic process via aminoadipic acid - - - - - - - - - - - - CBM9_1 HKD3_k127_3856254_7 661478.OP10G_0376 4.829e-23 113.0 COG0526@1|root,COG0526@2|Bacteria 2|Bacteria CO cell redox homeostasis - - - - - - - - - - - - AhpC-TSA,DUF2092,Redoxin HKD3_k127_3856254_8 886379.AEWI01000078_gene2003 5.996e-16 84.0 COG4232@1|root,COG4232@2|Bacteria,4NEW6@976|Bacteroidetes,2FNDE@200643|Bacteroidia,3XJW1@558415|Marinilabiliaceae 976|Bacteroidetes CO Disulphide bond corrector protein DsbC dsbD - 1.8.1.8 ko:K04084 - - - - ko00000,ko01000,ko03110 5.A.1.1 - - DsbC,DsbD,Thioredoxin_7 HKD3_k127_3856254_1 1382356.JQMP01000001_gene1155 1.547e-186 593.0 COG1350@1|root,COG1350@2|Bacteria,2G5YY@200795|Chloroflexi,27XSD@189775|Thermomicrobia 189775|Thermomicrobia E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine - - 4.2.1.20 ko:K06001 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722 RC00209,RC00210,RC00700,RC00701,RC02868 ko00000,ko00001,ko00002,ko01000 - - - PALP HKD3_k127_3856254_4 398767.Glov_0712 2.917e-146 473.0 COG0371@1|root,COG0371@2|Bacteria,1MWAE@1224|Proteobacteria,42PJS@68525|delta/epsilon subdivisions,2WJ69@28221|Deltaproteobacteria 28221|Deltaproteobacteria C PFAM Iron-containing alcohol dehydrogenase - - 1.1.1.6 ko:K00005 ko00561,ko00640,ko01100,map00561,map00640,map01100 - R01034,R10715,R10717 RC00029,RC00117,RC00670 ko00000,ko00001,ko01000 - - - Fe-ADH HKD3_k127_3856254_2 521674.Plim_2077 9.352e-184 582.0 COG0156@1|root,COG0156@2|Bacteria,2IX0H@203682|Planctomycetes 203682|Planctomycetes H Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA kbl - 2.3.1.29 ko:K00639 ko00260,map00260 - R00371 RC00004,RC00394 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 HKD3_k127_3856254_0 1379270.AUXF01000001_gene2513 9.325e-237 745.0 COG0154@1|root,COG0154@2|Bacteria,1ZT8R@142182|Gemmatimonadetes 2|Bacteria J Amidase gatA - 3.5.1.4 ko:K01426 ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120 - R02540,R03096,R03180,R03909,R05551,R05590 RC00010,RC00100,RC00950,RC01025 ko00000,ko00001,ko01000 - - - Amidase HKD3_k127_3856254_9 1007104.SUS17_1731 2.519e-12 76.0 COG2832@1|root,COG2832@2|Bacteria,1N7BI@1224|Proteobacteria,2UFAC@28211|Alphaproteobacteria,2K6I4@204457|Sphingomonadales 204457|Sphingomonadales S Protein of unknown function (DUF454) - - - ko:K09790 - - - - ko00000 - - - DUF454 HKD3_k127_3856254_6 459349.CLOAM0177 1.031e-41 160.0 COG3404@1|root,COG3643@1|root,COG3404@2|Bacteria,COG3643@2|Bacteria,2NNXZ@2323|unclassified Bacteria 2|Bacteria E Formiminotransferase-cyclodeaminase ftcD - 2.1.2.5,4.3.1.4 ko:K00603,ko:K13990 ko00340,ko00670,ko01100,map00340,map00670,map01100 - R02287,R02302,R03189 RC00165,RC00221,RC00223,RC00688,RC00870 ko00000,ko00001,ko01000,ko03036,ko04147 - - - FTCD,FTCD_C,FTCD_N HKD3_k127_3896294_3 370438.PTH_1584 5.863e-112 379.0 COG1012@1|root,COG1454@1|root,COG1012@2|Bacteria,COG1454@2|Bacteria,1TPB4@1239|Firmicutes,247IQ@186801|Clostridia,2611D@186807|Peptococcaceae 186801|Clostridia C belongs to the iron- containing alcohol dehydrogenase family adhE - 1.1.1.1,1.2.1.10 ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 - R00228,R00623,R00754,R01172,R04880,R05233,R05234,R06917,R06927 RC00004,RC00050,RC00088,RC00099,RC00116,RC00184,RC00649,RC01195 ko00000,ko00001,ko01000 - - - Aldedh,Fe-ADH HKD3_k127_3896294_0 635013.TherJR_0525 5.42e-265 833.0 COG0427@1|root,COG1670@1|root,COG0427@2|Bacteria,COG1670@2|Bacteria,1TPHC@1239|Firmicutes,247V0@186801|Clostridia,260IW@186807|Peptococcaceae 186801|Clostridia C PFAM Acetyl-CoA hydrolase transferase cat - - ko:K18122 ko00650,ko01100,ko01200,map00650,map01100,map01200 - R05336 RC00012,RC00014 ko00000,ko00001,ko01000 - - - AcetylCoA_hyd_C,AcetylCoA_hydro HKD3_k127_3896294_2 1313301.AUGC01000008_gene386 4.648e-151 492.0 COG0156@1|root,COG0156@2|Bacteria,4NFBU@976|Bacteroidetes 976|Bacteroidetes E Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA kbl - 2.3.1.29 ko:K00639 ko00260,map00260 - R00371 RC00004,RC00394 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 HKD3_k127_3896294_5 493475.GARC_5136 1.046e-06 53.0 COG0236@1|root,COG0236@2|Bacteria 2|Bacteria IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis acpP-7 - - - - - - - - - - - PP-binding HKD3_k127_3896294_1 1380763.BG53_03300 1.396e-178 575.0 COG0365@1|root,COG0365@2|Bacteria,1TQTI@1239|Firmicutes,4H9PN@91061|Bacilli,26TDB@186822|Paenibacillaceae 91061|Bacilli I catalyzes the conversion of acetate and CoA to acetyl-CoA acsA_1 - 6.2.1.1 ko:K01895 ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200 M00357 R00235,R00236,R00316,R00926,R01354 RC00004,RC00012,RC00043,RC00070,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000,ko01004 - - - AMP-binding,AMP-binding_C HKD3_k127_3896294_4 477974.Daud_0470 1.082e-15 83.0 COG0736@1|root,COG0736@2|Bacteria,1VA0T@1239|Firmicutes,24RC0@186801|Clostridia,262C8@186807|Peptococcaceae 186801|Clostridia I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein acpS - 2.7.8.7 ko:K00997 ko00770,map00770 - R01625 RC00002 ko00000,ko00001,ko01000 - - iHN637.CLJU_RS01470 ACPS HKD3_k127_3909668_7 251221.35211557 1.717e-40 173.0 COG1404@1|root,COG2706@1|root,COG2931@1|root,COG1404@2|Bacteria,COG2706@2|Bacteria,COG2931@2|Bacteria 2|Bacteria Q calcium- and calmodulin-responsive adenylate cyclase activity - - - - - - - - - - - - FG-GAP,HemolysinCabind,P_proprotein,Peptidase_S8,VCBS HKD3_k127_3909668_8 204669.Acid345_2450 2.919e-36 160.0 COG1572@1|root,COG1572@2|Bacteria 2|Bacteria NU bacterial-type flagellum-dependent cell motility - - - - - - - - - - - - CARDB,Collagen,fn3 HKD3_k127_3909668_12 375286.mma_0961 2.824e-22 110.0 COG2801@1|root,COG2801@2|Bacteria,1MVXQ@1224|Proteobacteria,2VQF1@28216|Betaproteobacteria,478J0@75682|Oxalobacteraceae 28216|Betaproteobacteria L Product type h extrachromosomal origin - - - ko:K07497 - - - - ko00000 - - - HTH_21,rve HKD3_k127_3909668_15 401053.AciPR4_1361 7.694e-12 72.0 COG2165@1|root,COG2165@2|Bacteria,3Y4X6@57723|Acidobacteria,2JJEP@204432|Acidobacteriia 204432|Acidobacteriia NU Prokaryotic N-terminal methylation motif - - - ko:K02650 ko02020,map02020 - - - ko00000,ko00001,ko02035,ko02044 3.A.15.2 - - N_methyl HKD3_k127_3909668_0 1123248.KB893316_gene4636 1.193e-138 471.0 COG0531@1|root,COG0531@2|Bacteria,4NDU2@976|Bacteroidetes,1IPFZ@117747|Sphingobacteriia 976|Bacteroidetes E amino acid - - - ko:K03294 - - - - ko00000 2.A.3.2 - - AA_permease_2,AA_permease_C HKD3_k127_3909668_3 1382359.JIAL01000001_gene2793 1.024e-73 260.0 COG2133@1|root,COG2133@2|Bacteria,3Y98P@57723|Acidobacteria,2JP56@204432|Acidobacteriia 204432|Acidobacteriia G pyrroloquinoline quinone binding - - - - - - - - - - - - - HKD3_k127_3909668_4 330214.NIDE2766 2.779e-70 241.0 COG1403@1|root,COG1403@2|Bacteria,3J0VM@40117|Nitrospirae 40117|Nitrospirae L HNH nucleases - - - - - - - - - - - - HNH_5 HKD3_k127_3909668_11 1122243.KB903782_gene274 9.492e-28 122.0 COG0791@1|root,COG0791@2|Bacteria,1N0EE@1224|Proteobacteria,1RP3P@1236|Gammaproteobacteria,3NRGK@468|Moraxellaceae 1236|Gammaproteobacteria M NlpC/P60 family - - - - - - - - - - - - NLPC_P60 HKD3_k127_3909668_14 1210884.HG799468_gene13714 1.301e-13 81.0 COG4900@1|root,COG4900@2|Bacteria,2IZSC@203682|Planctomycetes 203682|Planctomycetes - - - - - - - - - - - - - - - HKD3_k127_3909668_10 452637.Oter_4612 4.588e-29 131.0 COG5549@1|root,COG5549@2|Bacteria,46UKP@74201|Verrucomicrobia,3KA3E@414999|Opitutae 2|Bacteria O Immunoglobulin I-set domain protein - - 3.2.1.4,3.4.24.40 ko:K01179,ko:K01406 ko00500,ko01100,ko01503,map00500,map01100,map01503 - R06200,R11307,R11308 - ko00000,ko00001,ko01000,ko01002 - GH5,GH9 - CBM60,DUF4214,Glyco_hydro_16,HemolysinCabind,Peptidase_M10,Peptidase_M10_C,Reprolysin_4,W_rich_C HKD3_k127_3909668_6 378806.STAUR_6742 7.412e-57 206.0 COG0744@1|root,COG0744@2|Bacteria,1RDAQ@1224|Proteobacteria,42MBJ@68525|delta/epsilon subdivisions,2WNWX@28221|Deltaproteobacteria 28221|Deltaproteobacteria M Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors mtgA - 2.4.1.129 ko:K03814 ko00550,map00550 - - - ko00000,ko00001,ko01000,ko01003,ko01011 - GT51 - Transgly HKD3_k127_3909668_1 290397.Adeh_2994 9.413e-102 344.0 COG0075@1|root,COG0075@2|Bacteria,1MWHJ@1224|Proteobacteria,42MBH@68525|delta/epsilon subdivisions,2WK79@28221|Deltaproteobacteria,2YV9G@29|Myxococcales 28221|Deltaproteobacteria H aminotransferase - - 2.6.1.44,2.6.1.45,2.6.1.51 ko:K00830 ko00250,ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko04146,map00250,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map04146 M00346,M00532 R00369,R00372,R00585,R00588 RC00006,RC00008,RC00018 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_5 HKD3_k127_3909668_2 1125863.JAFN01000001_gene1971 1.365e-78 272.0 COG0329@1|root,COG0329@2|Bacteria,1MXI1@1224|Proteobacteria 1224|Proteobacteria EM Belongs to the DapA family yagE GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005975,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016830,GO:0016832,GO:0019520,GO:0019752,GO:0032787,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0046176,GO:0046395,GO:0047440,GO:0071704,GO:0072329,GO:1901575 4.1.2.28,4.3.3.7 ko:K01714,ko:K22397 ko00040,ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00040,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R01782,R10147 RC00307,RC00572,RC03062,RC03063 ko00000,ko00001,ko00002,ko01000 - - - DHDPS HKD3_k127_3909668_5 903818.KI912268_gene2181 1.915e-61 241.0 COG1629@1|root,COG4771@2|Bacteria 2|Bacteria P TonB-dependent receptor - - - - - - - - - - - - CarboxypepD_reg,Plug,TonB_dep_Rec HKD3_k127_3909668_13 595460.RRSWK_02116 1.259e-14 82.0 COG0515@1|root,COG0515@2|Bacteria 595460.RRSWK_02116|- KLT protein kinase activity - - - - - - - - - - - - - HKD3_k127_391289_1 768706.Desor_0896 7.858e-33 139.0 COG2059@1|root,COG2059@2|Bacteria,1V43H@1239|Firmicutes,24JTX@186801|Clostridia,261U1@186807|Peptococcaceae 186801|Clostridia P chromate transporter - - - ko:K07240 - - - - ko00000,ko02000 2.A.51.1 - - Chromate_transp HKD3_k127_391289_0 1121428.DESHY_60114___1 6.208e-38 156.0 COG0455@1|root,COG0455@2|Bacteria,1V1FH@1239|Firmicutes,24DP7@186801|Clostridia,2628E@186807|Peptococcaceae 186801|Clostridia D bacterial-type flagellum organization - - - - - - - - - - - - CbiA HKD3_k127_3937540_14 644282.Deba_1521 7.996e-13 79.0 COG4191@1|root,COG4191@2|Bacteria,1N4YV@1224|Proteobacteria,42UJD@68525|delta/epsilon subdivisions,2WR5P@28221|Deltaproteobacteria 28221|Deltaproteobacteria F PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - - - - - - - - - - HATPase_c HKD3_k127_3937540_7 644282.Deba_1522 2.425e-49 188.0 COG0613@1|root,COG0613@2|Bacteria,1N68X@1224|Proteobacteria,42TYN@68525|delta/epsilon subdivisions,2WR34@28221|Deltaproteobacteria 28221|Deltaproteobacteria S PHP-associated - - 3.1.3.97 ko:K07053 - - R00188,R11188 RC00078 ko00000,ko01000 - - - PHP_C HKD3_k127_3937540_11 1408473.JHXO01000006_gene1336 6.114e-23 102.0 COG4109@1|root,COG4109@2|Bacteria,4NTA0@976|Bacteroidetes,2FTZ6@200643|Bacteroidia 976|Bacteroidetes K DRTGG domain - - - - - - - - - - - - DRTGG HKD3_k127_3937540_4 1121472.AQWN01000001_gene35 9.849e-90 312.0 COG2000@1|root,COG2221@1|root,COG4624@1|root,COG2000@2|Bacteria,COG2221@2|Bacteria,COG4624@2|Bacteria,1TRB4@1239|Firmicutes,24BF5@186801|Clostridia,264N7@186807|Peptococcaceae 186801|Clostridia C Putative Fe-S cluster - - - - - - - - - - - - FeS,Fe_hyd_lg_C,Fer4,Fer4_10,Fer4_9 HKD3_k127_3937540_8 1304874.JAFY01000007_gene2013 3.003e-39 157.0 COG2172@1|root,COG2172@2|Bacteria,3TB7G@508458|Synergistetes 508458|Synergistetes T anti-sigma regulatory factor - - - - - - - - - - - - HATPase_c,HATPase_c_2 HKD3_k127_3937540_13 572547.Amico_0672 1.243e-13 83.0 COG4109@1|root,COG4109@2|Bacteria,3TBCK@508458|Synergistetes 508458|Synergistetes K PFAM DRTGG domain - - - - - - - - - - - - DRTGG HKD3_k127_3937540_2 880073.Calab_3046 8.129e-107 354.0 COG0493@1|root,COG1148@1|root,COG0493@2|Bacteria,COG1148@2|Bacteria,2NNUW@2323|unclassified Bacteria 2|Bacteria C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 ko:K03388 ko00680,ko01100,ko01120,ko01200,map00680,map01100,map01120,map01200 M00356,M00357,M00563,M00567 R04540,R11928,R11931,R11943,R11944 RC00011 ko00000,ko00001,ko00002,ko01000 - - - Fer4,Fer4_20,Fer4_7,Pyr_redox_2,Pyr_redox_3 HKD3_k127_3937540_3 452637.Oter_3676 1.366e-103 345.0 COG2048@1|root,COG2048@2|Bacteria 2|Bacteria C Heterodisulfide reductase, subunit B hdrB - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 ko:K03389 ko00680,ko01100,ko01120,ko01200,map00680,map01100,map01120,map01200 M00356,M00357,M00563,M00567 R04540,R11928,R11931,R11943,R11944 RC00011 ko00000,ko00001,ko00002,ko01000 - - - CCG HKD3_k127_3937540_6 880073.Calab_3048 3.508e-55 212.0 COG1150@1|root,COG1150@2|Bacteria,2NQ2K@2323|unclassified Bacteria 2|Bacteria C 4Fe-4S dicluster domain hdrC - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 ko:K03389,ko:K03390,ko:K16887,ko:K18930 ko00680,ko01100,ko01120,ko01200,map00680,map01100,map01120,map01200 M00356,M00357,M00563,M00567 R04540,R11928,R11931,R11943,R11944 RC00011 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_3424 CCG,FAD-oxidase_C,FAD_binding_4,Fer4_17,Fer4_7,Fer4_8,Fer4_9 HKD3_k127_3937540_10 526227.Mesil_1591 1.651e-24 109.0 COG1959@1|root,COG1959@2|Bacteria,1WIBU@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus K Transcriptional regulator, BadM Rrf2 family - - - - - - - - - - - - Rrf2 HKD3_k127_3937540_5 502025.Hoch_6459 5.461e-60 217.0 COG0563@1|root,COG0563@2|Bacteria,1MXCZ@1224|Proteobacteria,42M8E@68525|delta/epsilon subdivisions,2WJH0@28221|Deltaproteobacteria,2YV4U@29|Myxococcales 28221|Deltaproteobacteria F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism adk GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 M00049 R00127,R01547,R11319 RC00002 ko00000,ko00001,ko00002,ko01000,ko04147 - - - ADK,ADK_lid HKD3_k127_3937540_0 1195236.CTER_4163 1.216e-139 457.0 COG0637@1|root,COG0637@2|Bacteria,1VSTY@1239|Firmicutes,24Z1J@186801|Clostridia 186801|Clostridia S Haloacid dehalogenase-like hydrolase - - - - - - - - - - - - HAD_2 HKD3_k127_3937540_12 1173028.ANKO01000220_gene584 5.252e-14 86.0 COG1556@1|root,COG1556@2|Bacteria 2|Bacteria S LUD domain lldG - - ko:K00782 - - - - ko00000 - - - LUD_dom HKD3_k127_3937540_1 1521187.JPIM01000077_gene1101 1.321e-134 446.0 COG0247@1|root,COG1139@1|root,COG0247@2|Bacteria,COG1139@2|Bacteria,2G665@200795|Chloroflexi,37659@32061|Chloroflexia 32061|Chloroflexia C TIGRFAM iron-sulfur cluster binding protein - - - ko:K18929 - - - - ko00000 - - - DUF3390,Fer4_7,Fer4_8,LUD_dom HKD3_k127_3937540_9 867845.KI911784_gene603 2.684e-25 107.0 COG0247@1|root,COG0247@2|Bacteria,2G70Q@200795|Chloroflexi,376AS@32061|Chloroflexia 32061|Chloroflexia C Cysteine-rich domain - - - ko:K18928 - - - - ko00000 - - - CCG HKD3_k127_393929_3 502025.Hoch_3223 1.628e-20 92.0 COG0642@1|root,COG0642@2|Bacteria,1QX5P@1224|Proteobacteria,43BYA@68525|delta/epsilon subdivisions,2X796@28221|Deltaproteobacteria,2Z3E9@29|Myxococcales 28221|Deltaproteobacteria T His Kinase A (phosphoacceptor) domain - - 2.7.13.3 ko:K07709 ko02020,map02020 M00499 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HATPase_c,HisKA HKD3_k127_393929_0 502025.Hoch_3222 1.256e-144 474.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2WIT0@28221|Deltaproteobacteria,2YUB5@29|Myxococcales 28221|Deltaproteobacteria T response regulator - - - ko:K10943 ko02020,ko05111,map02020,map05111 M00515 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat HKD3_k127_393929_1 595460.RRSWK_05050 1.2e-114 386.0 COG1409@1|root,COG1409@2|Bacteria 2|Bacteria S acid phosphatase activity - - - - - - - - - - - - Metallophos,Pur_ac_phosph_N HKD3_k127_393929_2 595460.RRSWK_05050 1.134e-66 235.0 COG1409@1|root,COG1409@2|Bacteria 2|Bacteria S acid phosphatase activity - - - - - - - - - - - - Metallophos,Pur_ac_phosph_N HKD3_k127_3940943_1 269799.Gmet_0138 2.169e-114 386.0 COG5316@1|root,COG5316@2|Bacteria,1QCVP@1224|Proteobacteria,42QA4@68525|delta/epsilon subdivisions,2WKD1@28221|Deltaproteobacteria,43SDE@69541|Desulfuromonadales 28221|Deltaproteobacteria S Domain of unknown function (DUF4139) - - - - - - - - - - - - DUF4139,DUF4140 HKD3_k127_3940943_3 234267.Acid_1868 6.457e-05 55.0 COG4447@1|root,COG4447@2|Bacteria 2|Bacteria S cellulose binding - - - - - - - - - - - - PSII_BNR HKD3_k127_3940943_2 682795.AciX8_0272 2.871e-31 136.0 COG1595@1|root,COG1595@2|Bacteria,3Y7TB@57723|Acidobacteria,2JMZD@204432|Acidobacteriia 204432|Acidobacteriia K DNA-templated transcription, initiation - - - ko:K03088 - - - - ko00000,ko03021 - - - - HKD3_k127_3940943_0 388413.ALPR1_09800 1.423e-210 668.0 COG4447@1|root,COG4447@2|Bacteria,4NESU@976|Bacteroidetes,47NMF@768503|Cytophagia 976|Bacteroidetes G Sortilin, neurotensin receptor 3, - - - - - - - - - - - - BNR_6,Sortilin-Vps10 HKD3_k127_3951564_2 1125863.JAFN01000001_gene1373 0.0001373 48.0 2DD8H@1|root,2ZH1Z@2|Bacteria,1PBE0@1224|Proteobacteria,432B3@68525|delta/epsilon subdivisions,2WY4T@28221|Deltaproteobacteria 28221|Deltaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_3951564_0 1121920.AUAU01000006_gene302 1.325e-57 209.0 COG0500@1|root,COG2226@2|Bacteria 2|Bacteria Q methyltransferase - - - - - - - - - - - - Methyltransf_11 HKD3_k127_3951564_1 1286093.C266_14487 1.202e-09 69.0 COG1629@1|root,COG4771@2|Bacteria,1MX42@1224|Proteobacteria,2VMI9@28216|Betaproteobacteria,1JZXH@119060|Burkholderiaceae 28216|Betaproteobacteria P TonB-dependent hemoglobin transferrin lactoferrin bhuR - - ko:K16087 - - - - ko00000,ko02000 1.B.14.2 - - Plug,STN,TonB_dep_Rec HKD3_k127_3953321_0 342610.Patl_0130 9.48e-165 540.0 COG3537@1|root,COG3537@2|Bacteria,1MXCY@1224|Proteobacteria,1RYV7@1236|Gammaproteobacteria,2Q0TW@267888|Pseudoalteromonadaceae 1236|Gammaproteobacteria G Alpha-1,2-mannosidase - - - - - - - - - - - - Glyco_hydro_92 HKD3_k127_3957114_1 234267.Acid_6747 2.913e-87 291.0 COG0459@1|root,COG0459@2|Bacteria,3Y37I@57723|Acidobacteria 57723|Acidobacteria O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions groL - - ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 - - - ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 - - - Cpn60_TCP1 HKD3_k127_3957114_5 706587.Desti_2581 5.267e-39 147.0 COG0234@1|root,COG0234@2|Bacteria,1MZ2X@1224|Proteobacteria,42U7E@68525|delta/epsilon subdivisions,2WPZP@28221|Deltaproteobacteria,2MS7H@213462|Syntrophobacterales 28221|Deltaproteobacteria O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter groS GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - ko:K04078 - - - - ko00000,ko03029,ko03110 - - - Cpn10 HKD3_k127_3957114_0 1382359.JIAL01000001_gene2033 8.317e-115 377.0 COG0152@1|root,COG0152@2|Bacteria,3Y2KX@57723|Acidobacteria,2JIG6@204432|Acidobacteriia 204432|Acidobacteriia F SAICAR synthetase purC - 6.3.2.6,6.3.4.13 ko:K01923,ko:K13713 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04144,R04591 RC00064,RC00090,RC00162,RC00166 ko00000,ko00001,ko00002,ko01000 - - - SAICAR_synt HKD3_k127_3957114_4 243231.GSU1488 4.992e-41 164.0 COG0392@1|root,COG0392@2|Bacteria,1N7DR@1224|Proteobacteria,42N4R@68525|delta/epsilon subdivisions,2WS5Z@28221|Deltaproteobacteria,43TTU@69541|Desulfuromonadales 28221|Deltaproteobacteria S Lysylphosphatidylglycerol synthase TM region - - - ko:K07027 - - - - ko00000,ko02000 4.D.2 - - LPG_synthase_TM HKD3_k127_3957114_3 204669.Acid345_4041 1.016e-57 220.0 COG1327@1|root,COG1327@2|Bacteria,3Y4GA@57723|Acidobacteria,2JJC7@204432|Acidobacteriia 204432|Acidobacteriia K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes nrdR - - ko:K07738 - - - - ko00000,ko03000 - - - ATP-cone HKD3_k127_3957114_6 56780.SYN_02715 0.000672 51.0 29GM5@1|root,303IT@2|Bacteria,1Q2CN@1224|Proteobacteria,437Z0@68525|delta/epsilon subdivisions,2X38V@28221|Deltaproteobacteria,2MSFD@213462|Syntrophobacterales 28221|Deltaproteobacteria S Domain of unknown function (DUF4390) - - - - - - - - - - - - DUF4390 HKD3_k127_3957114_2 1125863.JAFN01000001_gene1651 9.446e-64 240.0 COG5000@1|root,COG5000@2|Bacteria,1MWKZ@1224|Proteobacteria,42MCN@68525|delta/epsilon subdivisions,2WIYA@28221|Deltaproteobacteria 28221|Deltaproteobacteria T histidine kinase HAMP region domain protein ntrY - 2.7.13.3 ko:K13598 ko02020,map02020 M00498 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HAMP,HATPase_c,HisKA,PAS,PAS_4 HKD3_k127_3973337_6 497964.CfE428DRAFT_2165 0.0007587 49.0 COG2010@1|root,COG2010@2|Bacteria 2|Bacteria C Cytochrome c - - - - - - - - - - - - PSCyt1,PSCyt2,PSD1 HKD3_k127_3973337_4 243090.RB2226 0.0001742 51.0 COG2319@1|root,COG3064@1|root,COG2319@2|Bacteria,COG3064@2|Bacteria,2IY5Q@203682|Planctomycetes 203682|Planctomycetes M WD domain, G-beta repeat - - - - - - - - - - - - Big_2,PSCyt1,PSCyt2,PSD1,WD40 HKD3_k127_3973337_3 1384056.N787_08145 2.827e-05 55.0 COG1404@1|root,COG3291@1|root,COG1404@2|Bacteria,COG3291@2|Bacteria 2|Bacteria S metallopeptidase activity fpp2 - - - - - - - - - - - PKD,Peptidase_M43 HKD3_k127_3973337_1 1336235.JAEG01000003_gene3645 3.598e-50 183.0 COG2259@1|root,COG2259@2|Bacteria,1RIVG@1224|Proteobacteria,2UATI@28211|Alphaproteobacteria,4BEWF@82115|Rhizobiaceae 28211|Alphaproteobacteria S DoxX - - - ko:K15977 - - - - ko00000 - - - DoxX HKD3_k127_3973337_0 1077972.ARGLB_064_00320 3.507e-88 300.0 COG3591@1|root,COG3591@2|Bacteria,2I3KX@201174|Actinobacteria 201174|Actinobacteria E Trypsin-like serine protease - - - - - - - - - - - - Trypsin HKD3_k127_3973337_2 69395.JQLZ01000002_gene1573 8.119e-43 162.0 COG1522@1|root,COG1522@2|Bacteria,1MX7R@1224|Proteobacteria,2VG6I@28211|Alphaproteobacteria 28211|Alphaproteobacteria K helix_turn_helix ASNC type - - - ko:K03719 - - - - ko00000,ko03000,ko03036 - - - AsnC_trans_reg,HTH_24 HKD3_k127_4003055_2 925409.KI911562_gene683 9.257e-29 120.0 COG1181@1|root,COG1181@2|Bacteria,4P8F6@976|Bacteroidetes 2|Bacteria M Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain - - 6.3.2.4 ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 - R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Dala_Dala_lig_C,Dala_Dala_lig_N HKD3_k127_4003055_0 925409.KI911562_gene684 2.363e-173 555.0 COG1181@1|root,COG2940@1|root,COG1181@2|Bacteria,COG2940@2|Bacteria,4P8F6@976|Bacteroidetes 2|Bacteria M Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain - - 6.3.2.4 ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 - R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Ank,Dala_Dala_lig_C,Dala_Dala_lig_N,SET HKD3_k127_4003055_1 347834.RHE_CH03735 8.95e-125 417.0 COG1007@1|root,COG1007@2|Bacteria,1MV56@1224|Proteobacteria,2U2YQ@28211|Alphaproteobacteria,4B9S7@82115|Rhizobiaceae 28211|Alphaproteobacteria C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoN2 - 1.6.5.3 ko:K00343 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Proton_antipo_M HKD3_k127_400885_3 314607.KB13_1288 1.322e-24 105.0 COG0776@1|root,COG0776@2|Bacteria,1MZ5B@1224|Proteobacteria,2VU4V@28216|Betaproteobacteria,1KQZD@119066|unclassified Betaproteobacteria 28216|Betaproteobacteria L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions hupB - - ko:K03530 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding HKD3_k127_400885_0 335543.Sfum_3063 3.625e-51 196.0 COG0793@1|root,COG0793@2|Bacteria,1MU39@1224|Proteobacteria,42MHD@68525|delta/epsilon subdivisions,2WJKC@28221|Deltaproteobacteria,2MQ40@213462|Syntrophobacterales 28221|Deltaproteobacteria M PDZ domain (Also known as DHR or GLGF) ctpA - 3.4.21.102 ko:K03797 - - - - ko00000,ko01000,ko01002 - - - PDZ,PDZ_2,Peptidase_S41 HKD3_k127_400885_1 1442599.JAAN01000043_gene410 8.63e-35 151.0 COG4942@1|root,COG4942@2|Bacteria,1MY3E@1224|Proteobacteria,1RPQP@1236|Gammaproteobacteria,1X50B@135614|Xanthomonadales 135614|Xanthomonadales D Peptidase M23 - - - - - - - - - - - - Peptidase_M23 HKD3_k127_400885_2 314230.DSM3645_26774 7.357e-26 109.0 COG3379@1|root,COG3379@2|Bacteria,2IXA8@203682|Planctomycetes 203682|Planctomycetes S Type I phosphodiesterase / nucleotide pyrophosphatase - - - - - - - - - - - - Phosphodiest HKD3_k127_4011752_0 232721.Ajs_2415 6.225e-27 118.0 COG1595@1|root,COG1595@2|Bacteria,1MVPD@1224|Proteobacteria,2VQPE@28216|Betaproteobacteria,4ADGF@80864|Comamonadaceae 28216|Betaproteobacteria K PFAM sigma-70 region 2 domain protein - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 HKD3_k127_4011752_1 1191523.MROS_2231 5.367e-06 48.0 COG2309@1|root,COG2309@2|Bacteria 2|Bacteria E aminopeptidase activity - - - - - - - - - - - - Peptidase_M29 HKD3_k127_4052630_0 573413.Spirs_3355 1.064e-185 596.0 COG4231@1|root,COG4231@2|Bacteria,2J5C0@203691|Spirochaetes 203691|Spirochaetes C Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates - - 1.2.7.8 ko:K00179 - - - - br01601,ko00000,ko01000 - - - POR_N,TPP_enzyme_C HKD3_k127_4052630_2 545695.TREAZ_3595 1.852e-57 225.0 COG1014@1|root,COG1014@2|Bacteria,2J7I3@203691|Spirochaetes 203691|Spirochaetes C Pyruvate ferredoxin/flavodoxin oxidoreductase - - 1.2.7.8 ko:K00180 - - - - br01601,ko00000,ko01000 - - - POR HKD3_k127_4052630_1 1047013.AQSP01000098_gene2568 1.301e-168 555.0 COG1042@1|root,COG1042@2|Bacteria,2NNW5@2323|unclassified Bacteria 2|Bacteria C synthetase (ADP forming), alpha - - 6.2.1.13 ko:K01905,ko:K09181,ko:K22224 ko00010,ko00620,ko00640,ko01100,ko01120,map00010,map00620,map00640,map01100,map01120 - R00229,R00920 RC00004,RC00012,RC00014 ko00000,ko00001,ko01000,ko01004 - - - ATP-grasp_5,CoA_binding_2,Succ_CoA_lig HKD3_k127_4052630_3 1184267.A11Q_79 2.222e-49 184.0 2AY4N@1|root,31Q6J@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_4052630_5 204669.Acid345_2182 2.244e-15 79.0 2CBGA@1|root,32RQS@2|Bacteria,3Y586@57723|Acidobacteria,2JJU2@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - HKD3_k127_4052630_4 1134474.O59_002919 5.283e-43 162.0 COG0330@1|root,COG0330@2|Bacteria,1P8ZI@1224|Proteobacteria,1RUQU@1236|Gammaproteobacteria,1FI0E@10|Cellvibrio 1236|Gammaproteobacteria O prohibitin homologues - - - - - - - - - - - - Band_7 HKD3_k127_4055113_1 765911.Thivi_1825 2.761e-99 325.0 COG3808@1|root,COG3808@2|Bacteria,1MUQ3@1224|Proteobacteria,1RN4K@1236|Gammaproteobacteria,1WVYF@135613|Chromatiales 135613|Chromatiales C pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for hppA - 3.6.1.1 ko:K15987 ko00190,map00190 - - - ko00000,ko00001,ko01000 3.A.10.1 - - H_PPase HKD3_k127_4055113_0 588932.JHOF01000026_gene325 3.943e-108 360.0 COG0604@1|root,COG0604@2|Bacteria,1MX8A@1224|Proteobacteria,2TR1J@28211|Alphaproteobacteria,2KFJF@204458|Caulobacterales 204458|Caulobacterales C NAD(P)H quinone oxidoreductase, PIG3 family - - - - - - - - - - - - ADH_N,ADH_zinc_N,ADH_zinc_N_2 HKD3_k127_4088641_1 1187851.A33M_1387 4.332e-50 192.0 COG2010@1|root,COG2010@2|Bacteria,1MV6D@1224|Proteobacteria,2TT9U@28211|Alphaproteobacteria 28211|Alphaproteobacteria C Cytochrome c, mono- and diheme variants - - - - - - - - - - - - Cytochrom_C,Cytochrome_CBB3 HKD3_k127_4088641_2 1187851.A33M_1387 1.084e-20 100.0 COG2010@1|root,COG2010@2|Bacteria,1MV6D@1224|Proteobacteria,2TT9U@28211|Alphaproteobacteria 28211|Alphaproteobacteria C Cytochrome c, mono- and diheme variants - - - - - - - - - - - - Cytochrom_C,Cytochrome_CBB3 HKD3_k127_4088641_0 479434.Sthe_0311 6.683e-63 224.0 COG1215@1|root,COG1215@2|Bacteria,2G6BS@200795|Chloroflexi,27Y06@189775|Thermomicrobia 189775|Thermomicrobia M Glycosyltransferase like family 2 - - - - - - - - - - - - Glycos_transf_2 HKD3_k127_4133874_11 1142394.PSMK_13110 1.386e-58 211.0 COG1082@1|root,COG1082@2|Bacteria,2IXZ6@203682|Planctomycetes 203682|Planctomycetes G isomerase - - - - - - - - - - - - AP_endonuc_2 HKD3_k127_4133874_0 1123240.ATVO01000008_gene2479 2.785e-210 669.0 COG0154@1|root,COG0154@2|Bacteria,1MUVQ@1224|Proteobacteria,2TV11@28211|Alphaproteobacteria,2K0M0@204457|Sphingomonadales 204457|Sphingomonadales J Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit - - 3.5.1.4 ko:K01426 ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120 - R02540,R03096,R03180,R03909,R05551,R05590 RC00010,RC00100,RC00950,RC01025 ko00000,ko00001,ko01000 - - - Amidase HKD3_k127_4133874_16 926554.KI912668_gene5166 1.53e-05 57.0 COG1428@1|root,COG1428@2|Bacteria,1WI9A@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus F PFAM deoxynucleoside kinase - - - - - - - - - - - - dNK HKD3_k127_4133874_12 42256.RradSPS_0743 3.808e-31 142.0 COG1807@1|root,COG1807@2|Bacteria 2|Bacteria M 4-amino-4-deoxy-L-arabinose transferase activity - - - - - - - - - - - - DUF2723,PMT_2 HKD3_k127_4133874_5 497964.CfE428DRAFT_2630 1.313e-147 477.0 COG1571@1|root,COG1571@2|Bacteria,46UI2@74201|Verrucomicrobia 74201|Verrucomicrobia S tRNA wobble cytosine modification - - - - - - - - - - - - - HKD3_k127_4133874_4 1396141.BATP01000034_gene4149 4.266e-157 505.0 COG4260@1|root,COG4260@2|Bacteria,46UVR@74201|Verrucomicrobia,2IV4M@203494|Verrucomicrobiae 203494|Verrucomicrobiae S SPFH domain-Band 7 family - - - - - - - - - - - - Band_7_1,HTH_17 HKD3_k127_4133874_9 316067.Geob_2932 4.753e-74 270.0 COG1875@1|root,COG1875@2|Bacteria,1MUX1@1224|Proteobacteria,42MK9@68525|delta/epsilon subdivisions,2WJ1C@28221|Deltaproteobacteria,43UHM@69541|Desulfuromonadales 28221|Deltaproteobacteria T SMART Nucleotide binding protein, PINc phoH1 - - ko:K07175 - - - - ko00000 - - - PIN_4,PhoH HKD3_k127_4133874_6 290397.Adeh_2106 5.692e-116 383.0 COG0053@1|root,COG0053@2|Bacteria,1MUDS@1224|Proteobacteria,42NCJ@68525|delta/epsilon subdivisions,2WM7V@28221|Deltaproteobacteria,2Z1U0@29|Myxococcales 28221|Deltaproteobacteria P Dimerisation domain of Zinc Transporter - - - - - - - - - - - - Cation_efflux,ZT_dimer HKD3_k127_4133874_10 926556.Echvi_2036 1.018e-73 256.0 COG0726@1|root,COG0726@2|Bacteria,4NFJP@976|Bacteroidetes,47JTA@768503|Cytophagia 976|Bacteroidetes G Glycosyl hydrolase family 9 - - 3.2.1.4 ko:K01179 ko00500,ko01100,map00500,map01100 - R06200,R11307,R11308 - ko00000,ko00001,ko01000 - GH5,GH9 - CelD_N,Glyco_hydro_9,Polysacc_deac_1 HKD3_k127_4133874_2 1267535.KB906767_gene3945 3.64e-171 564.0 COG1874@1|root,COG1874@2|Bacteria,3Y2WD@57723|Acidobacteria,2JIC9@204432|Acidobacteriia 204432|Acidobacteriia G Beta-galactosidase trimerisation domain - - 3.2.1.23 ko:K12308 ko00052,map00052 - R01105 RC00452 ko00000,ko00001,ko01000 - - - Glyco_hydro_42,Glyco_hydro_42C,Glyco_hydro_42M HKD3_k127_4133874_14 1112212.JH584235_gene2729 3.782e-18 87.0 COG1278@1|root,COG1278@2|Bacteria,1QRMX@1224|Proteobacteria,2V17U@28211|Alphaproteobacteria,2KB7U@204457|Sphingomonadales 204457|Sphingomonadales K Cold shock protein domain - - - - - - - - - - - - CSD HKD3_k127_4133874_7 1288494.EBAPG3_7640 5.363e-92 325.0 COG0790@1|root,COG0790@2|Bacteria,1MWPA@1224|Proteobacteria,2VM3A@28216|Betaproteobacteria,3727A@32003|Nitrosomonadales 28216|Betaproteobacteria S Sel1-like repeats. - - - ko:K07126 - - - - ko00000 - - - Sel1 HKD3_k127_4133874_18 1121935.AQXX01000042_gene4588 0.0005188 52.0 COG4733@1|root,COG4733@2|Bacteria,1R55I@1224|Proteobacteria,1S5X2@1236|Gammaproteobacteria 1236|Gammaproteobacteria D cellulase activity - - - - - - - - - - - - - HKD3_k127_4133874_8 1121904.ARBP01000005_gene4578 2.638e-83 289.0 COG1082@1|root,COG1082@2|Bacteria,4NIWS@976|Bacteroidetes,47K4W@768503|Cytophagia 976|Bacteroidetes G Xylose isomerase domain protein TIM barrel - - - - - - - - - - - - AP_endonuc_2,AP_endonuc_2_N HKD3_k127_4133874_1 595460.RRSWK_04532 9.858e-178 567.0 COG0673@1|root,COG0673@2|Bacteria,2IXPT@203682|Planctomycetes 203682|Planctomycetes S PFAM oxidoreductase - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C HKD3_k127_4133874_17 479435.Kfla_6359 0.0001461 47.0 COG1249@1|root,COG1249@2|Bacteria,2I3I8@201174|Actinobacteria,4DTF8@85009|Propionibacteriales 201174|Actinobacteria C FAD dependent oxidoreductase - - - - - - - - - - - - FAD_oxidored HKD3_k127_4133874_13 1189612.A33Q_1380 9.708e-20 99.0 COG1053@1|root,COG1053@2|Bacteria,4NG56@976|Bacteroidetes,47NX7@768503|Cytophagia 976|Bacteroidetes C FAD dependent oxidoreductase - - - - - - - - - - - - FAD_oxidored HKD3_k127_4133874_15 452637.Oter_2278 8.851e-08 56.0 COG1073@1|root,COG3250@1|root,COG1073@2|Bacteria,COG3250@2|Bacteria,46Z55@74201|Verrucomicrobia,3K7F1@414999|Opitutae 414999|Opitutae G alpha-L-rhamnosidase - - - - - - - - - - - - Glyco_hydro_106 HKD3_k127_4133874_3 234267.Acid_4393 6.287e-159 530.0 COG0515@1|root,COG0515@2|Bacteria 234267.Acid_4393|- KLT protein kinase activity - - - - - - - - - - - - - HKD3_k127_4144108_0 1048983.EL17_03605 5.259e-123 409.0 COG0006@1|root,COG0006@2|Bacteria,4NF0F@976|Bacteroidetes,47JWC@768503|Cytophagia 976|Bacteroidetes E Metallopeptidase family M24 - - - - - - - - - - - - Peptidase_M24 HKD3_k127_4144108_1 234267.Acid_0070 1.078e-74 271.0 COG0642@1|root,COG2205@2|Bacteria,3Y2W3@57723|Acidobacteria 57723|Acidobacteria T Histidine kinase - - 2.7.13.3 ko:K07646 ko02020,map02020 M00454 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - DUF4118,HATPase_c,HisKA HKD3_k127_4144108_2 234267.Acid_0071 2.231e-70 256.0 COG0745@1|root,COG0745@2|Bacteria,3Y4Q8@57723|Acidobacteria 57723|Acidobacteria K Two component transcriptional regulator, winged helix family - - - ko:K07667 ko02020,ko02024,map02020,map02024 M00454 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C HKD3_k127_4144108_3 204669.Acid345_0512 1.481e-64 227.0 COG2156@1|root,COG2156@2|Bacteria,3Y49M@57723|Acidobacteria,2JJ0W@204432|Acidobacteriia 204432|Acidobacteriia P Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex kdpC - 3.6.3.12 ko:K01548 ko02020,map02020 - - - ko00000,ko00001,ko01000 3.A.3.7 - - KdpC HKD3_k127_4144108_4 1279038.KB907340_gene1491 3.579e-22 96.0 COG2216@1|root,COG2216@2|Bacteria,1MU7D@1224|Proteobacteria,2TREM@28211|Alphaproteobacteria,2JQRV@204441|Rhodospirillales 204441|Rhodospirillales P Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system kdpB - 3.6.3.12 ko:K01547 ko02020,map02020 - - - ko00000,ko00001,ko01000 3.A.3.7 - - E1-E2_ATPase,Hydrolase HKD3_k127_4156914_0 1163407.UU7_05698 1.309e-69 244.0 COG1228@1|root,COG1228@2|Bacteria,1R6NP@1224|Proteobacteria,1SZBD@1236|Gammaproteobacteria,1X5QW@135614|Xanthomonadales 135614|Xanthomonadales Q Amidohydrolase family - - - - - - - - - - - - Amidohydro_1 HKD3_k127_4192189_3 234267.Acid_2988 3.428e-191 602.0 COG0296@1|root,COG2382@1|root,COG0296@2|Bacteria,COG2382@2|Bacteria,3Y2ZN@57723|Acidobacteria 57723|Acidobacteria GP Putative esterase - - - ko:K07214 - - - - ko00000 - - - Esterase HKD3_k127_4192189_4 694427.Palpr_1656 3.868e-190 623.0 COG3507@1|root,COG3507@2|Bacteria,4NEMG@976|Bacteroidetes,2FPP1@200643|Bacteroidia,22WTR@171551|Porphyromonadaceae 2|Bacteria G F5 8 type C domain - - - - - - - - - - - - CBM_35,F5_F8_type_C,Glyco_hydro_43 HKD3_k127_4192189_5 639030.JHVA01000001_gene2108 2.287e-59 208.0 COG0627@1|root,COG0627@2|Bacteria,3Y63W@57723|Acidobacteria,2JMD1@204432|Acidobacteriia 204432|Acidobacteriia S Putative esterase - - - - - - - - - - - - Esterase HKD3_k127_4192189_2 278963.ATWD01000001_gene4179 1.74e-194 629.0 COG3534@1|root,COG3534@2|Bacteria,3Y2MY@57723|Acidobacteria,2JKIM@204432|Acidobacteriia 204432|Acidobacteriia G alpha-L-arabinofuranosidase - - 3.2.1.55 ko:K01209 ko00520,map00520 - R01762 - ko00000,ko00001,ko01000 - GH51 - - HKD3_k127_4192189_1 1346791.M529_12250 1.027e-217 687.0 COG3534@1|root,COG3534@2|Bacteria,1R699@1224|Proteobacteria,2U4S3@28211|Alphaproteobacteria,2K1HM@204457|Sphingomonadales 204457|Sphingomonadales G Alpha-L-arabinofuranosidase C-terminus - - 3.2.1.55 ko:K01209 ko00520,map00520 - R01762 - ko00000,ko00001,ko01000 - GH51 - Alpha-L-AF_C HKD3_k127_4192189_0 925409.KI911562_gene527 1.822e-299 935.0 28I5V@1|root,2Z891@2|Bacteria,4NF4U@976|Bacteroidetes 976|Bacteroidetes G Glycosyl hydrolase family 9 - - - - - - - - - - - - CelD_N,Glyco_hydro_9 HKD3_k127_4251890_3 1496688.ER33_14330 8.918e-84 287.0 COG2085@1|root,COG2085@2|Bacteria,1G18H@1117|Cyanobacteria 1117|Cyanobacteria S NADP oxidoreductase coenzyme F420-dependent - - 1.5.1.40 ko:K06988 - - - - ko00000,ko01000 - - - F420_oxidored HKD3_k127_4251890_1 1379270.AUXF01000002_gene1205 8.027e-121 392.0 COG0693@1|root,COG0693@2|Bacteria 2|Bacteria S protein deglycation - - 3.5.1.124 ko:K05520 - - - - ko00000,ko01000,ko01002 - - - DJ-1_PfpI HKD3_k127_4251890_2 1385935.N836_00410 2.688e-89 304.0 COG0583@1|root,COG0583@2|Bacteria,1G3WW@1117|Cyanobacteria,1HB8H@1150|Oscillatoriales 1117|Cyanobacteria K Bacterial regulatory helix-turn-helix protein, lysR family - - - - - - - - - - - - HTH_1,LysR_substrate HKD3_k127_4251890_0 1121405.dsmv_3003 0.0 3445.0 COG3459@1|root,COG3459@2|Bacteria,1MVNX@1224|Proteobacteria,42PFN@68525|delta/epsilon subdivisions,2WJVD@28221|Deltaproteobacteria 28221|Deltaproteobacteria G glycosyltransferase 36 associated - - 2.4.1.20 ko:K00702,ko:K13688 ko00500,ko01100,map00500,map01100 - R00952 RC00049 ko00000,ko00001,ko01000,ko01003 - GH94,GT36,GT84 - Glyco_hydro_36,Glyco_transf_36,Glycoamylase HKD3_k127_426681_0 1278073.MYSTI_06128 5.773e-70 253.0 COG4531@1|root,COG4531@2|Bacteria,1REHQ@1224|Proteobacteria,42TZ1@68525|delta/epsilon subdivisions,2WQ6N@28221|Deltaproteobacteria 28221|Deltaproteobacteria P ABC-type Zn2 transport system, periplasmic component surface adhesin - - - - - - - - - - - - - HKD3_k127_426681_3 1191523.MROS_0042 2.337e-30 127.0 COG2010@1|root,COG2010@2|Bacteria 2|Bacteria C Cytochrome c actE - - - - - - - - - - - Cytochrome_CBB3,DUF3341 HKD3_k127_426681_2 1184267.A11Q_1509 4.295e-34 137.0 COG2010@1|root,COG2010@2|Bacteria,1RDVX@1224|Proteobacteria,42WYA@68525|delta/epsilon subdivisions,2MTWM@213481|Bdellovibrionales,2WT1Y@28221|Deltaproteobacteria 213481|Bdellovibrionales C Protein of unknown function (DUF3341) - - - - - - - - - - - - DUF3341 HKD3_k127_426681_1 264462.Bd1609 7.091e-69 238.0 COG5557@1|root,COG5557@2|Bacteria,1PFX4@1224|Proteobacteria,42PIE@68525|delta/epsilon subdivisions,2MTQJ@213481|Bdellovibrionales,2WM3C@28221|Deltaproteobacteria 213481|Bdellovibrionales C Polysulphide reductase moz - - ko:K00185 - - - - ko00000 5.A.3 - - DUF3341,NrfD HKD3_k127_428431_0 1267535.KB906767_gene2552 3.999e-190 609.0 COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,3Y3BP@57723|Acidobacteria,2JMMF@204432|Acidobacteriia 204432|Acidobacteriia M Tricorn protease PDZ domain - - - ko:K08676 - - - - ko00000,ko01000,ko01002 - - - PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ HKD3_k127_4286638_3 234267.Acid_4535 2.011e-76 265.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,3Y6A7@57723|Acidobacteria 57723|Acidobacteria KLT Protein tyrosine kinase - - - - - - - - - - - - PD40,Pkinase HKD3_k127_4286638_2 903818.KI912268_gene2016 4.399e-147 474.0 COG0502@1|root,COG0502@2|Bacteria 2|Bacteria H biotin synthase activity hydE - 2.8.1.6 ko:K01012 ko00780,ko01100,map00780,map01100 M00123,M00573,M00577 R01078 RC00441 ko00000,ko00001,ko00002,ko01000 - - - BATS,Radical_SAM HKD3_k127_4286638_1 903818.KI912268_gene1779 6.127e-192 629.0 COG0486@1|root,COG0486@2|Bacteria 2|Bacteria S GTPase activity hydF - 4.1.99.19 ko:K03150,ko:K03650 ko00730,ko01100,map00730,map01100 - R08701,R10246 RC00053,RC00209,RC00870,RC01434,RC03095 ko00000,ko00001,ko01000,ko03016 - - - MMR_HSR1 HKD3_k127_4286638_0 903818.KI912268_gene1782 1.566e-200 636.0 COG1027@1|root,COG1027@2|Bacteria,3Y3XS@57723|Acidobacteria 57723|Acidobacteria E Fumarase C C-terminus - - 4.3.1.1 ko:K01744 ko00250,ko01100,map00250,map01100 - R00490 RC00316,RC02799 ko00000,ko00001,ko01000 - - - FumaraseC_C,Lyase_1 HKD3_k127_4286638_4 234267.Acid_1594 2.825e-41 156.0 COG1725@1|root,COG1725@2|Bacteria,3Y5VN@57723|Acidobacteria 57723|Acidobacteria K helix_turn_helix gluconate operon transcriptional repressor - - - ko:K07979 - - - - ko00000,ko03000 - - - GntR HKD3_k127_4286638_5 234267.Acid_1595 5.18e-41 156.0 COG0330@1|root,COG0330@2|Bacteria 2|Bacteria O stress-induced mitochondrial fusion hflC - - - - - - - - - - - Band_7 HKD3_k127_4294931_9 1122951.ATUE01000007_gene819 4.397e-10 68.0 COG2937@1|root,COG2937@2|Bacteria,1MWZ6@1224|Proteobacteria,1RM7K@1236|Gammaproteobacteria,3NIHA@468|Moraxellaceae 1236|Gammaproteobacteria I Belongs to the GPAT DAPAT family plsB GO:0003674,GO:0003824,GO:0004366,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006629,GO:0006631,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0019752,GO:0031224,GO:0031226,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.3.1.15 ko:K00631 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R00851,R09380 RC00004,RC00039,RC00041 ko00000,ko00001,ko00002,ko01000,ko01004 - - iECs_1301.ECs5024,iG2583_1286.G2583_4866 Acyltransferase HKD3_k127_4294931_0 1303518.CCALI_00772 9.031e-132 428.0 COG0473@1|root,COG0473@2|Bacteria 2|Bacteria CE 3-isopropylmalate dehydrogenase activity icd - 1.1.1.41 ko:K00030 ko00020,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010 R00709 RC00114 br01601,ko00000,ko00001,ko00002,ko01000 - - - Iso_dh HKD3_k127_4294931_12 742723.HMPREF9477_01944 0.0004187 54.0 COG3959@1|root,COG3959@2|Bacteria,1TT51@1239|Firmicutes,247IK@186801|Clostridia,27IB5@186928|unclassified Lachnospiraceae 186801|Clostridia G overlaps another CDS with the same product name tktA - 2.2.1.1 ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R01067,R01641,R01830,R06590 RC00032,RC00226,RC00571,RC01560 ko00000,ko00001,ko00002,ko01000 - - - Transketolase_N HKD3_k127_4294931_10 234267.Acid_4033 1.376e-07 65.0 COG2304@1|root,COG2304@2|Bacteria,3Y3DR@57723|Acidobacteria 57723|Acidobacteria S oxidoreductase activity - - - - - - - - - - - - - HKD3_k127_4294931_2 479434.Sthe_3469 8.523e-69 242.0 COG0171@1|root,COG0171@2|Bacteria,2G5QP@200795|Chloroflexi,27YNR@189775|Thermomicrobia 189775|Thermomicrobia H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses nadE - 6.3.1.5,6.3.5.1 ko:K01916,ko:K01950 ko00760,ko01100,map00760,map01100 M00115 R00189,R00257 RC00010,RC00100 ko00000,ko00001,ko00002,ko01000 - - - CN_hydrolase,NAD_synthase HKD3_k127_4294931_1 383372.Rcas_3592 1.64e-84 292.0 COG2605@1|root,COG2605@2|Bacteria 2|Bacteria G GHMP kinase - - - - - - - - - - - - CTP_transf_like,GHMP_kinases_C,GHMP_kinases_N HKD3_k127_4294931_13 29306.JOBE01000102_gene49 0.0008226 51.0 COG2133@1|root,COG3291@1|root,COG3828@1|root,COG2133@2|Bacteria,COG3291@2|Bacteria,COG3828@2|Bacteria,2GJFY@201174|Actinobacteria 201174|Actinobacteria G Glucose sorbosone - - - - - - - - - - - - CBM_6,DUF1080,GSDH,PKD,ThuA HKD3_k127_4294931_7 266117.Rxyl_2945 5.678e-22 98.0 COG2329@1|root,COG2329@2|Bacteria 2|Bacteria S heme oxygenase (decyclizing) activity - - - - - - - - - - - - ABM HKD3_k127_4294931_14 1279017.AQYJ01000022_gene2613 0.0009024 51.0 COG1262@1|root,COG1262@2|Bacteria,1NQ5K@1224|Proteobacteria,1RQVS@1236|Gammaproteobacteria,46674@72275|Alteromonadaceae 1236|Gammaproteobacteria S PEGA domain - - - - - - - - - - - - FGE-sulfatase,PEGA HKD3_k127_4294931_3 457396.CSBG_01578 1.532e-36 159.0 COG0535@1|root,COG0535@2|Bacteria,1TR52@1239|Firmicutes,247SB@186801|Clostridia,36E8H@31979|Clostridiaceae 186801|Clostridia C Radical SAM domain protein - - - - - - - - - - - - Fer4_12,Fer4_14,Radical_SAM,SPASM HKD3_k127_4294931_4 927658.AJUM01000034_gene567 6.678e-33 146.0 29X8I@1|root,30IXV@2|Bacteria,4P0MB@976|Bacteroidetes 976|Bacteroidetes - - - - - - - - - - - - - - - HKD3_k127_4294931_5 525373.HMPREF0766_10859 1.197e-28 124.0 COG4589@1|root,COG4589@2|Bacteria,4NT8F@976|Bacteroidetes 976|Bacteroidetes S Cytidylyltransferase family - - 2.7.7.41 ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 M00093 R01799 RC00002 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_1 HKD3_k127_4294931_8 1121372.AULK01000001_gene2499 4.605e-14 85.0 COG1597@1|root,COG1597@2|Bacteria,2GJ3K@201174|Actinobacteria,4FKAS@85023|Microbacteriaceae 201174|Actinobacteria I Diacylglycerol kinase catalytic domain - - - - - - - - - - - - DAGK_cat HKD3_k127_4294931_6 1123248.KB893359_gene2011 2.004e-28 122.0 COG0558@1|root,COG0558@2|Bacteria,4NHGH@976|Bacteroidetes,1IT19@117747|Sphingobacteriia 976|Bacteroidetes I CDP-alcohol phosphatidyltransferase - - 2.7.8.5 ko:K00995 ko00564,ko01100,map00564,map01100 - R01801 RC00002,RC00017,RC02795 ko00000,ko00001,ko01000 - - - CDP-OH_P_transf HKD3_k127_431085_1 1452718.JBOY01000024_gene350 1.837e-129 421.0 COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,1RMBN@1236|Gammaproteobacteria 1236|Gammaproteobacteria V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran HKD3_k127_431085_2 1304885.AUEY01000002_gene359 8.525e-104 351.0 COG0845@1|root,COG0845@2|Bacteria,1MU78@1224|Proteobacteria,42Q4P@68525|delta/epsilon subdivisions,2WJHQ@28221|Deltaproteobacteria,2MJRC@213118|Desulfobacterales 28221|Deltaproteobacteria M Biotin-lipoyl like - - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 HKD3_k127_431085_0 1380394.JADL01000013_gene761 1.499e-230 722.0 COG0366@1|root,COG0366@2|Bacteria,1PDXT@1224|Proteobacteria 1224|Proteobacteria G alpha amylase, catalytic region - - - - - - - - - - - - Alpha-amylase HKD3_k127_431085_3 1267534.KB906755_gene4015 1.443e-16 82.0 2E3FB@1|root,32YE4@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_4319338_3 243365.CV_3928 0.0002223 43.0 2DNW1@1|root,32ZFG@2|Bacteria,1N4M9@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - HKD3_k127_4319338_0 1185876.BN8_04256 8.248e-88 311.0 COG0296@1|root,COG1680@1|root,COG0296@2|Bacteria,COG1680@2|Bacteria,4NG6Z@976|Bacteroidetes,47PR8@768503|Cytophagia 976|Bacteroidetes V Beta-lactamase - - - - - - - - - - - - AMPK1_CBM,Beta-lactamase HKD3_k127_4319338_1 1408473.JHXO01000012_gene274 6.664e-51 191.0 COG1453@1|root,COG1453@2|Bacteria,4NGCW@976|Bacteroidetes,2FPG8@200643|Bacteroidia 976|Bacteroidetes S Tat pathway signal sequence domain protein - - - ko:K07079 - - - - ko00000 - - - Aldo_ket_red,Fer4_17 HKD3_k127_4326311_0 1189612.A33Q_0275 1.924e-140 465.0 COG0673@1|root,COG0673@2|Bacteria,4NH13@976|Bacteroidetes,47JJW@768503|Cytophagia 976|Bacteroidetes S PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA HKD3_k127_4337945_3 1396141.BATP01000022_gene294 9.275e-146 471.0 COG0673@1|root,COG0673@2|Bacteria,46U7B@74201|Verrucomicrobia,2IV4V@203494|Verrucomicrobiae 203494|Verrucomicrobiae S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA HKD3_k127_4337945_7 357808.RoseRS_3453 2.896e-94 319.0 COG3828@1|root,COG3828@2|Bacteria,2G61G@200795|Chloroflexi 200795|Chloroflexi S Trehalose utilisation - - - ko:K09992 - - - - ko00000 - - - ThuA HKD3_k127_4337945_6 518766.Rmar_1623 1.648e-96 323.0 COG3291@1|root,COG3291@2|Bacteria,4PMYH@976|Bacteroidetes 976|Bacteroidetes S Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 HKD3_k127_4337945_10 575540.Isop_0468 3.101e-67 243.0 COG0500@1|root,COG1215@1|root,COG1215@2|Bacteria,COG2226@2|Bacteria,2J55B@203682|Planctomycetes 203682|Planctomycetes H Methylase involved in ubiquinone menaquinone biosynthesis - - - - - - - - - - - - Methyltransf_11 HKD3_k127_4337945_5 926549.KI421517_gene1530 1.095e-136 453.0 COG0673@1|root,COG0673@2|Bacteria,4NEN5@976|Bacteroidetes,47JNX@768503|Cytophagia 976|Bacteroidetes S PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C HKD3_k127_4337945_0 1047013.AQSP01000126_gene2740 0.0 1078.0 COG2866@1|root,COG2866@2|Bacteria,2NQNH@2323|unclassified Bacteria 2|Bacteria E Zinc carboxypeptidase - - - ko:K14054 - - - - ko00000 - - - AstE_AspA,Peptidase_M14 HKD3_k127_4337945_4 1089547.KB913013_gene1776 3.898e-137 448.0 COG0520@1|root,COG0520@2|Bacteria,4NF4G@976|Bacteroidetes,47M48@768503|Cytophagia 976|Bacteroidetes E Aminotransferase class-V - - - - - - - - - - - - Aminotran_5 HKD3_k127_4337945_11 234267.Acid_1441 1.106e-54 209.0 COG0639@1|root,COG0639@2|Bacteria 2|Bacteria T phosphoprotein phosphatase activity - - - - - - - - - - - - Metallophos HKD3_k127_4337945_2 401526.TcarDRAFT_1976 1.922e-203 651.0 COG2759@1|root,COG2759@2|Bacteria,1TP6N@1239|Firmicutes,4H1XW@909932|Negativicutes 909932|Negativicutes H Belongs to the formate--tetrahydrofolate ligase family fhs - 6.3.4.3 ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R00943 RC00026,RC00111 ko00000,ko00001,ko00002,ko01000 - - - FTHFS HKD3_k127_4337945_1 1042377.AFPJ01000028_gene2288 2.383e-224 729.0 COG0457@1|root,COG0457@2|Bacteria,1N0A9@1224|Proteobacteria,1RZSZ@1236|Gammaproteobacteria,466AY@72275|Alteromonadaceae 1236|Gammaproteobacteria S COG0457 FOG TPR repeat - - - - - - - - - - - - TPR_16,TPR_2,TPR_7 HKD3_k127_4337945_9 1122176.KB903551_gene4256 1.315e-73 280.0 COG4409@1|root,COG4409@2|Bacteria,4NI5M@976|Bacteroidetes,1IU97@117747|Sphingobacteriia 976|Bacteroidetes G exo-alpha-(2->6)-sialidase activity - - - - - - - - - - - - BNR_2 HKD3_k127_4337945_8 1189612.A33Q_2411 4.31e-79 273.0 COG4221@1|root,COG4221@2|Bacteria,4PKIR@976|Bacteroidetes,47X98@768503|Cytophagia 976|Bacteroidetes S KR domain - - - - - - - - - - - - adh_short_C2 HKD3_k127_4337945_12 700015.Corgl_1596 3.256e-24 107.0 2DT5B@1|root,33ISI@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_4352217_8 497964.CfE428DRAFT_2978 1.289e-55 196.0 COG0665@1|root,COG0665@2|Bacteria,46TKJ@74201|Verrucomicrobia 74201|Verrucomicrobia E FAD dependent oxidoreductase - - - - - - - - - - - - FAD_oxidored HKD3_k127_4352217_10 479437.Elen_1971 2.186e-27 128.0 COG2731@1|root,COG2731@2|Bacteria,2HV2Y@201174|Actinobacteria,4CW7H@84998|Coriobacteriia 84998|Coriobacteriia G Domain of unknown function (DUF386) - - - - - - - - - - - - DUF386 HKD3_k127_4352217_3 1150600.ADIARSV_4037 7.602e-129 432.0 28HII@1|root,2Z7TZ@2|Bacteria,4NHR6@976|Bacteroidetes,1INR1@117747|Sphingobacteriia 976|Bacteroidetes - - - - - - - - - - - - - - - HKD3_k127_4352217_4 240016.ABIZ01000001_gene1588 3.213e-106 377.0 COG0673@1|root,COG0673@2|Bacteria,46TM9@74201|Verrucomicrobia,2ITZ3@203494|Verrucomicrobiae 203494|Verrucomicrobiae S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA HKD3_k127_4352217_1 1121904.ARBP01000011_gene1436 1.115e-158 521.0 COG4948@1|root,COG4948@2|Bacteria,4NFH1@976|Bacteroidetes,47MTW@768503|Cytophagia 976|Bacteroidetes M Enolase C-terminal domain-like - - - - - - - - - - - - MR_MLE_C HKD3_k127_4352217_7 1089547.KB913013_gene1513 8.398e-78 278.0 COG1082@1|root,COG1082@2|Bacteria,4NIG9@976|Bacteroidetes,47NIT@768503|Cytophagia 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2 HKD3_k127_4352217_2 1122605.KB893647_gene368 2.585e-153 507.0 COG0673@1|root,COG0673@2|Bacteria,4P16C@976|Bacteroidetes,1IWQM@117747|Sphingobacteriia 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA HKD3_k127_4352217_9 1340493.JNIF01000003_gene1284 4.023e-29 126.0 COG0607@1|root,COG0607@2|Bacteria 2|Bacteria P Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - ko:K03892 - - - - ko00000,ko03000 - - - HTH_20,HTH_5,Rhodanese HKD3_k127_4352217_0 204669.Acid345_1624 0.0 1127.0 COG4447@1|root,COG4447@2|Bacteria,3Y2SN@57723|Acidobacteria,2JIF7@204432|Acidobacteriia 204432|Acidobacteriia S Sortilin, neurotensin receptor 3, - - - - - - - - - - - - Sortilin-Vps10 HKD3_k127_4352217_5 1122176.KB903549_gene1286 1.251e-103 356.0 COG0793@1|root,COG0793@2|Bacteria,4NM82@976|Bacteroidetes,1IXME@117747|Sphingobacteriia 976|Bacteroidetes M N-terminal domain of Peptidase_S41 in eukaryotic IRBP - - - - - - - - - - - - Peptidase_S41,Peptidase_S41_N,TPR_2 HKD3_k127_4352217_6 1122179.KB890443_gene1216 2.445e-95 335.0 COG1680@1|root,COG1680@2|Bacteria 2|Bacteria V peptidase activity - - - - - - - - - - - - Beta-lactamase HKD3_k127_436853_3 331678.Cphamn1_0650 1.371e-31 137.0 COG3794@1|root,COG3794@2|Bacteria 2|Bacteria C PFAM blue (type 1) copper domain protein - - - - - - - - - - - - CarboxypepD_reg HKD3_k127_436853_4 1396418.BATQ01000106_gene5357 9.148e-22 108.0 28IVM@1|root,2Z8U0@2|Bacteria,46S57@74201|Verrucomicrobia,2IVM9@203494|Verrucomicrobiae 203494|Verrucomicrobiae - - - - - - - - - - - - - - - HKD3_k127_436853_2 1123278.KB893548_gene4716 1.305e-34 138.0 COG2010@1|root,COG2010@2|Bacteria,4NN91@976|Bacteroidetes,47PSM@768503|Cytophagia 976|Bacteroidetes C Haem-binding domain - - - - - - - - - - - - Haem_bd HKD3_k127_436853_0 204669.Acid345_1420 3.107e-89 312.0 COG0750@1|root,COG0750@2|Bacteria,3Y2KN@57723|Acidobacteria,2JI1B@204432|Acidobacteriia 204432|Acidobacteriia M Peptidase family M50 - - - ko:K11749 ko02024,ko04112,map02024,map04112 - - - ko00000,ko00001,ko01000,ko01002 - - - PDZ_2,Peptidase_M50 HKD3_k127_436853_1 398767.Glov_2714 2.592e-67 234.0 COG0743@1|root,COG0743@2|Bacteria,1MU4G@1224|Proteobacteria,42NI1@68525|delta/epsilon subdivisions,2WK14@28221|Deltaproteobacteria 28221|Deltaproteobacteria I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) dxr GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 ko:K00099 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05688 RC01452 ko00000,ko00001,ko00002,ko01000 - - - DXPR_C,DXP_redisom_C,DXP_reductoisom HKD3_k127_4652014_3 1123248.KB893319_gene4021 2.371e-112 369.0 COG2272@1|root,COG2272@2|Bacteria,4NF5N@976|Bacteroidetes,1IRFR@117747|Sphingobacteriia 976|Bacteroidetes I Belongs to the type-B carboxylesterase lipase family - - - ko:K03929 - - - - ko00000,ko01000 - CE10 - COesterase HKD3_k127_4652014_1 1128421.JAGA01000001_gene2274 1.359e-127 416.0 COG1940@1|root,COG1940@2|Bacteria,2NQJS@2323|unclassified Bacteria 2|Bacteria GK ROK family scrK - 2.7.1.2,2.7.1.4 ko:K00845,ko:K00847 ko00010,ko00051,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00051,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R00760,R00867,R01600,R01786,R03920 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - ROK HKD3_k127_4652014_0 1396418.BATQ01000020_gene5046 2.943e-205 646.0 COG0477@1|root,COG2814@2|Bacteria,46TKN@74201|Verrucomicrobia,2IU9N@203494|Verrucomicrobiae 203494|Verrucomicrobiae EGP Sugar (and other) transporter - - - - - - - - - - - - Sugar_tr HKD3_k127_4652014_2 1121920.AUAU01000005_gene1038 1.262e-116 394.0 COG1228@1|root,COG1228@2|Bacteria,3Y4IP@57723|Acidobacteria 57723|Acidobacteria Q PFAM amidohydrolase - - - - - - - - - - - - Amidohydro_1 HKD3_k127_4652014_9 670487.Ocepr_2013 1.939e-30 134.0 2E55P@1|root,32ZYJ@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_4652014_6 1040989.AWZU01000035_gene1764 2.316e-45 172.0 COG2020@1|root,COG2020@2|Bacteria,1R7G6@1224|Proteobacteria,2VG1Y@28211|Alphaproteobacteria,3K6HR@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria O Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - - - - - - - - - - ICMT,PEMT HKD3_k127_4652014_12 204669.Acid345_1455 1.358e-08 59.0 COG0457@1|root,COG0515@1|root,COG5616@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,COG5616@2|Bacteria,3Y2HR@57723|Acidobacteria,2JI02@204432|Acidobacteriia 204432|Acidobacteriia KLT Tetratricopeptide repeats - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase,TPR_11,TPR_16,TPR_2,Trans_reg_C HKD3_k127_4652014_4 211165.AJLN01000116_gene2992 1.588e-80 284.0 COG0500@1|root,COG2226@2|Bacteria,1G96Z@1117|Cyanobacteria 1117|Cyanobacteria Q Methyltransferase domain - - - - - - - - - - - - - HKD3_k127_4652014_13 1300350.DSW25_02420 2.72e-05 48.0 COG3410@1|root,COG3410@2|Bacteria,1PRQ3@1224|Proteobacteria,2U2KB@28211|Alphaproteobacteria,3ZYKW@60136|Sulfitobacter 28211|Alphaproteobacteria S Uncharacterized conserved protein (DUF2075) - - - - - - - - - - - - DUF2075 HKD3_k127_4652014_11 419947.MRA_2623A 3.494e-09 63.0 COG2002@1|root,COG2002@2|Bacteria,2HANT@201174|Actinobacteria 201174|Actinobacteria K toxin-antitoxin pair type II binding - - - - - - - - - - - - - HKD3_k127_4652014_10 1385521.N803_10960 8.915e-10 68.0 COG1848@1|root,COG1848@2|Bacteria,2IR37@201174|Actinobacteria 201174|Actinobacteria S Toxic component of a toxin-antitoxin (TA) module. An RNase - GO:0005575,GO:0005576 - - - - - - - - - - PIN HKD3_k127_4652014_5 420662.Mpe_A3611 1.156e-69 243.0 COG1708@1|root,COG1708@2|Bacteria,1RCAH@1224|Proteobacteria,2WAA3@28216|Betaproteobacteria,1KNX1@119065|unclassified Burkholderiales 28216|Betaproteobacteria S TRANSCRIPTIONal - - - - - - - - - - - - - HKD3_k127_4652014_7 1123504.JQKD01000042_gene4670 2.665e-39 151.0 2AXM7@1|root,31PMG@2|Bacteria,1RIYV@1224|Proteobacteria,2VUMG@28216|Betaproteobacteria,4AFSP@80864|Comamonadaceae 28216|Betaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_4652014_8 1144275.COCOR_01591 4.896e-32 140.0 COG0457@1|root,COG2819@1|root,COG0457@2|Bacteria,COG2819@2|Bacteria,1R54Q@1224|Proteobacteria 1224|Proteobacteria S hydrolase of the alpha beta superfamily - - - ko:K07017 - - - - ko00000 - - - Esterase HKD3_k127_4736002_2 936589.HMPREF1521_1762 2.829e-15 80.0 COG0203@1|root,COG0203@2|Bacteria,1V6JQ@1239|Firmicutes,4H4TR@909932|Negativicutes 909932|Negativicutes J Ribosomal protein L17 rplQ - - ko:K02879 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L17 HKD3_k127_4736002_1 1384054.N790_05345 3.96e-52 194.0 COG0730@1|root,COG0730@2|Bacteria,1PGTZ@1224|Proteobacteria,1RPMM@1236|Gammaproteobacteria,1X5WN@135614|Xanthomonadales 135614|Xanthomonadales S membrane transporter protein - - - ko:K07090 - - - - ko00000 - - - TauE HKD3_k127_4736002_0 204669.Acid345_4753 5.378e-83 279.0 COG0480@1|root,COG0480@2|Bacteria,3Y2RR@57723|Acidobacteria,2JI85@204432|Acidobacteriia 204432|Acidobacteriia J Elongation factor G, domain IV - - - ko:K02355 - - - - ko00000,ko03012,ko03029 - - - EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2 HKD3_k127_4745445_2 1382306.JNIM01000001_gene1210 0.0003133 43.0 COG2267@1|root,COG2267@2|Bacteria,2GBHH@200795|Chloroflexi 200795|Chloroflexi I Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) menH - 4.2.99.20 ko:K08680 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R08166 RC02148,RC02475 ko00000,ko00001,ko00002,ko01000 - - - Abhydrolase_1,Abhydrolase_6 HKD3_k127_4745445_1 234267.Acid_5630 2.489e-73 257.0 COG2897@1|root,COG2897@2|Bacteria,3Y7T0@57723|Acidobacteria 57723|Acidobacteria M Rhodanese Homology Domain - - 2.8.1.1,2.8.1.2 ko:K01011 ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122 - R01931,R03105,R03106 RC00214 ko00000,ko00001,ko01000 - - - Rhodanese HKD3_k127_4745445_0 103733.JNYO01000031_gene1607 5.457e-99 327.0 COG0112@1|root,COG0112@2|Bacteria,2GK7U@201174|Actinobacteria,4DZ2J@85010|Pseudonocardiales 201174|Actinobacteria E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism glyA - 2.1.2.1 ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 M00140,M00141,M00346,M00532 R00945,R09099 RC00022,RC00112,RC01583,RC02958 ko00000,ko00001,ko00002,ko01000 - - - SHMT HKD3_k127_4835618_2 880073.Calab_1428 7.243e-172 559.0 COG1894@1|root,COG1894@2|Bacteria,2NNM1@2323|unclassified Bacteria 2|Bacteria C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain hoxF - 1.12.1.3,1.6.5.3 ko:K00335,ko:K05587,ko:K18331 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - 2Fe-2S_thioredx,Complex1_51K,Fer4,NADH_4Fe-4S,SLBB HKD3_k127_4835618_3 880073.Calab_1429 5.232e-54 196.0 COG1905@1|root,COG1905@2|Bacteria,2NPSB@2323|unclassified Bacteria 2|Bacteria C Thioredoxin-like [2Fe-2S] ferredoxin - - 1.12.1.4,1.6.5.3 ko:K00334,ko:K17999 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - 2Fe-2S_thioredx HKD3_k127_4835618_4 880073.Calab_1430 1.954e-53 196.0 COG2344@1|root,COG2344@2|Bacteria,2NPI1@2323|unclassified Bacteria 2|Bacteria K Modulates transcription in response to changes in cellular NADH NAD( ) redox state rex - - ko:K01926 - - - - ko00000,ko03000 - - - CoA_binding,Put_DNA-bind_N HKD3_k127_4835618_1 882.DVU_1765 8.601e-202 639.0 COG0502@1|root,COG0502@2|Bacteria,1MXK0@1224|Proteobacteria,42Q6J@68525|delta/epsilon subdivisions,2WKXA@28221|Deltaproteobacteria,2M7TR@213115|Desulfovibrionales 28221|Deltaproteobacteria C Biotin and Thiamin Synthesis associated - - 4.1.99.19 ko:K03150 ko00730,ko01100,map00730,map01100 - R10246 RC01434,RC03095 ko00000,ko00001,ko01000 - - - BATS,Radical_SAM HKD3_k127_4835618_5 1122182.KB903813_gene2562 3.104e-11 76.0 COG1807@1|root,COG1807@2|Bacteria,2I8W7@201174|Actinobacteria,4D94G@85008|Micromonosporales 201174|Actinobacteria M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - - - - - - - - - - - HKD3_k127_4835618_6 867845.KI911784_gene358 0.0001396 55.0 COG1807@1|root,COG4783@1|root,COG1807@2|Bacteria,COG4783@2|Bacteria,2G9FD@200795|Chloroflexi,374XJ@32061|Chloroflexia 32061|Chloroflexia M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - - - - - - - - - - PMT_2,TPR_16,TPR_8 HKD3_k127_4835618_0 1210884.HG799469_gene14157 4.104e-280 880.0 COG1506@1|root,COG1506@2|Bacteria 2|Bacteria E serine-type peptidase activity - - 3.4.14.5 ko:K01278 ko04974,map04974 - - - ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 - - - DPPIV_N,Peptidase_S9 HKD3_k127_4838043_0 1303518.CCALI_02898 8.713e-76 259.0 COG0209@1|root,COG0209@2|Bacteria 2|Bacteria F ribonucleoside-diphosphate reductase activity nrdJ - 1.17.4.1 ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R02017,R02018,R02019,R02024 RC00613 ko00000,ko00001,ko00002,ko01000,ko03400 - - - Ribonuc_red_2_N,Ribonuc_red_lgC HKD3_k127_4838043_5 234267.Acid_4188 4.012e-10 70.0 COG1266@1|root,COG1266@2|Bacteria,3Y5CJ@57723|Acidobacteria 57723|Acidobacteria S PFAM Abortive infection protein - - - ko:K07052 - - - - ko00000 - - - Abi HKD3_k127_4838043_1 1128421.JAGA01000002_gene389 2.634e-66 245.0 COG1807@1|root,COG1807@2|Bacteria 2|Bacteria M 4-amino-4-deoxy-L-arabinose transferase activity - - - - - - - - - - - - PMT_2 HKD3_k127_4838043_3 644282.Deba_2085 9.693e-33 146.0 COG0438@1|root,COG0438@2|Bacteria,1PIF6@1224|Proteobacteria,42VFS@68525|delta/epsilon subdivisions,2WWFB@28221|Deltaproteobacteria 28221|Deltaproteobacteria M Glycosyl transferases group 1 - - - - - - - - - - - - Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1 HKD3_k127_4838043_2 383372.Rcas_2343 1.052e-63 232.0 COG0500@1|root,COG2226@2|Bacteria,2GACE@200795|Chloroflexi,37588@32061|Chloroflexia 32061|Chloroflexia Q PFAM Methyltransferase type 11 - - - - - - - - - - - - Methyltransf_11 HKD3_k127_4838043_4 357808.RoseRS_3471 8.076e-16 91.0 COG0438@1|root,COG0438@2|Bacteria,2GB6D@200795|Chloroflexi,3753H@32061|Chloroflexia 32061|Chloroflexia M PFAM glycosyl transferase group 1 - - - - - - - - - - - - Glyco_trans_1_4,Glyco_transf_4 HKD3_k127_4845150_4 684949.ATTJ01000003_gene3164 1.012e-15 79.0 COG1073@1|root,COG1073@2|Bacteria 2|Bacteria S thiolester hydrolase activity - - - - - - - - - - - - Abhydrolase_1,Abhydrolase_6 HKD3_k127_4845150_3 986075.CathTA2_1582 1.035e-19 100.0 COG1295@1|root,COG1295@2|Bacteria,1U7HM@1239|Firmicutes,4H9MJ@91061|Bacilli 91061|Bacilli E Belongs to the UPF0761 family yihY - - ko:K07058 - - - - ko00000 - - - Virul_fac_BrkB HKD3_k127_4845150_0 234267.Acid_7180 1.546e-210 675.0 COG1331@1|root,COG1331@2|Bacteria,3Y3AA@57723|Acidobacteria 57723|Acidobacteria O Protein of unknown function, DUF255 - - - ko:K06888 - - - - ko00000 - - - GlcNAc_2-epim,Thioredox_DsbH HKD3_k127_4845150_2 243231.GSU1762 5.796e-43 172.0 COG0457@1|root,COG0457@2|Bacteria,1QXNU@1224|Proteobacteria,43C4R@68525|delta/epsilon subdivisions,2X7F5@28221|Deltaproteobacteria,43SFM@69541|Desulfuromonadales 28221|Deltaproteobacteria S Peptidase MA superfamily - - - - - - - - - - - - Peptidase_MA_2,TPR_16,TPR_2,TPR_8 HKD3_k127_4845150_1 1047013.AQSP01000144_gene927 8.924e-163 525.0 COG3533@1|root,COG3533@2|Bacteria,2NNW0@2323|unclassified Bacteria 2|Bacteria S Beta-L-arabinofuranosidase, GH127 - - - ko:K09955 - - - - ko00000 - - - F5_F8_type_C,Glyco_hydro_127 HKD3_k127_4859345_2 573413.Spirs_4285 1.931e-17 83.0 COG0646@1|root,COG0685@1|root,COG0646@2|Bacteria,COG0685@2|Bacteria,2JBCT@203691|Spirochaetes 203691|Spirochaetes E Methylenetetrahydrofolate reductase - - 1.5.1.20,2.1.1.10 ko:K00297,ko:K00547 ko00270,ko00670,ko00720,ko01100,ko01110,ko01120,ko01200,ko01523,map00270,map00670,map00720,map01100,map01110,map01120,map01200,map01523 M00377 R00650,R01224,R07168 RC00003,RC00035,RC00081 ko00000,ko00001,ko00002,ko01000 - - - MTHFR,S-methyl_trans HKD3_k127_4859345_0 391937.NA2_08766 3.537e-137 441.0 COG1741@1|root,COG1741@2|Bacteria,1MWIP@1224|Proteobacteria,2TRHR@28211|Alphaproteobacteria,43NHA@69277|Phyllobacteriaceae 28211|Alphaproteobacteria S Belongs to the pirin family yhhW - - ko:K06911 - - - - ko00000 - - - Pirin,Pirin_C HKD3_k127_4859345_1 880073.Calab_1706 2.81e-28 121.0 COG3339@1|root,COG3339@2|Bacteria 2|Bacteria S Protein of unknown function (DUF1232) - - - - - - - - - - - - DUF1232 HKD3_k127_4865830_0 296591.Bpro_0638 7.051e-87 289.0 COG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2VI23@28216|Betaproteobacteria,4ABS4@80864|Comamonadaceae 28216|Betaproteobacteria S Tripartite tricarboxylate transporter family receptor - - - - - - - - - - - - TctC HKD3_k127_4868187_0 768671.ThimaDRAFT_4559 4.013e-130 426.0 COG0659@1|root,COG0659@2|Bacteria,1MWDF@1224|Proteobacteria,1SYC8@1236|Gammaproteobacteria,1WXWA@135613|Chromatiales 135613|Chromatiales U sulphate transporter - - - - - - - - - - - - STAS,Sulfate_transp HKD3_k127_4868187_1 204669.Acid345_2054 5.614e-104 366.0 COG4389@1|root,COG4389@2|Bacteria,3Y4EU@57723|Acidobacteria,2JKDZ@204432|Acidobacteriia 204432|Acidobacteriia L Site-specific recombinase - - - - - - - - - - - - SpecificRecomb HKD3_k127_4914498_2 1214065.BAGV01000052_gene1862 1.568e-08 56.0 COG0505@1|root,COG0505@2|Bacteria,1MUB9@1224|Proteobacteria,1RMAW@1236|Gammaproteobacteria,282IC@191675|unclassified Enterobacteriaceae 1236|Gammaproteobacteria F Belongs to the CarA family carA GO:0000050,GO:0003674,GO:0003824,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005951,GO:0006082,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0032991,GO:0034641,GO:0034654,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046394,GO:0046483,GO:0055086,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - iAPECO1_1312.APECO1_1950,iUTI89_1310.UTI89_C0036,ic_1306.c0040 CPSase_sm_chain,GATase HKD3_k127_4914498_1 880072.Desac_1041 2.677e-114 377.0 COG0505@1|root,COG0505@2|Bacteria,1MUB9@1224|Proteobacteria,42KZG@68525|delta/epsilon subdivisions,2WIQ5@28221|Deltaproteobacteria 28221|Deltaproteobacteria F Belongs to the CarA family carA - 6.3.5.5 ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - - CPSase_sm_chain,GATase HKD3_k127_4914498_0 290397.Adeh_1729 8.707e-126 406.0 COG0458@1|root,COG0458@2|Bacteria,1MUDZ@1224|Proteobacteria,42MGK@68525|delta/epsilon subdivisions,2WJQH@28221|Deltaproteobacteria,2YUKG@29|Myxococcales 28221|Deltaproteobacteria F Carbamoyl-phosphate synthetase ammonia chain carB - 6.3.5.5 ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - - CPSase_L_D2,CPSase_L_D3,MGS HKD3_k127_4921001_1 314278.NB231_07442 3.973e-14 78.0 2E3RZ@1|root,32YPK@2|Bacteria,1NJYT@1224|Proteobacteria,1SHP1@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_4921001_0 1198452.Jab_1c15190 2.401e-238 760.0 COG1629@1|root,COG4771@2|Bacteria,1MU9K@1224|Proteobacteria,2VJSU@28216|Betaproteobacteria,472GB@75682|Oxalobacteraceae 28216|Betaproteobacteria P TonB dependent receptor - - - - - - - - - - - - Plug,TonB_dep_Rec HKD3_k127_4944303_0 1267533.KB906733_gene3534 5.2e-212 672.0 COG2936@1|root,COG2936@2|Bacteria,3Y2WR@57723|Acidobacteria,2JIVN@204432|Acidobacteriia 204432|Acidobacteriia S X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - ko:K06978 - - - - ko00000 - - - PepX_C,Peptidase_S15 HKD3_k127_4951599_1 1047013.AQSP01000142_gene204 1.454e-41 159.0 COG1082@1|root,COG1082@2|Bacteria 2|Bacteria G myo-inosose-2 dehydratase activity - - - - - - - - - - - - AP_endonuc_2 HKD3_k127_4951599_0 1047013.AQSP01000142_gene207 1.128e-168 540.0 COG0591@1|root,COG0591@2|Bacteria 2|Bacteria E symporter activity - - - ko:K03307 - - - - ko00000 2.A.21 - - SSF HKD3_k127_4958464_0 717785.HYPMC_1741 3.494e-68 244.0 COG2207@1|root,COG2207@2|Bacteria,1MX23@1224|Proteobacteria,2TT6H@28211|Alphaproteobacteria,3N99C@45401|Hyphomicrobiaceae 28211|Alphaproteobacteria K Arabinose-binding domain of AraC transcription regulator, N-term - - - - - - - - - - - - Arabinose_bd,HTH_18 HKD3_k127_4958464_1 631362.Thi970DRAFT_01797 2.5e-40 159.0 COG2067@1|root,COG2067@2|Bacteria,1RJIQ@1224|Proteobacteria,1SAC1@1236|Gammaproteobacteria,1WZ89@135613|Chromatiales 135613|Chromatiales I long-chain fatty acid transport protein - - - - - - - - - - - - - HKD3_k127_4961063_1 292459.STH1623 6.861e-111 369.0 COG1111@1|root,COG1205@1|root,COG1111@2|Bacteria,COG1205@2|Bacteria,1TSPA@1239|Firmicutes 1239|Firmicutes L COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine yprA GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - ko:K06877 - - - - ko00000 - - - DEAD,DUF1998,Helicase_C HKD3_k127_4961063_0 1499683.CCFF01000013_gene324 7.117e-195 632.0 COG0252@1|root,COG0252@2|Bacteria,1TPP9@1239|Firmicutes,248F3@186801|Clostridia,36EB6@31979|Clostridiaceae 186801|Clostridia EJ L-asparaginase - - 3.5.1.1 ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 - R00485 RC00010,RC02798 ko00000,ko00001,ko01000 - - - Asparaginase HKD3_k127_4961063_2 1499683.CCFF01000013_gene325 3.463e-96 335.0 COG2511@1|root,COG2511@2|Bacteria,1UPG0@1239|Firmicutes,25HFT@186801|Clostridia 186801|Clostridia J GatB/GatE catalytic domain - - - - - - - - - - - - GatB_N HKD3_k127_4968382_1 1047013.AQSP01000139_gene2342 9.832e-70 254.0 COG1529@1|root,COG1529@2|Bacteria,2NPHP@2323|unclassified Bacteria 2|Bacteria C Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - 1.17.1.4 ko:K11177 ko00230,ko01100,ko01120,map00230,map01100,map01120 M00546 R01768,R02103 RC00143 ko00000,ko00001,ko00002,ko01000 - - - Ald_Xan_dh_C,Ald_Xan_dh_C2 HKD3_k127_4968382_2 1047013.AQSP01000139_gene2343 2.236e-63 222.0 COG2080@1|root,COG2080@2|Bacteria,2NPPX@2323|unclassified Bacteria 2|Bacteria C PFAM 2Fe-2S -binding - - 1.2.5.3,1.3.99.16 ko:K03518,ko:K07302,ko:K13483 ko00230,ko01100,ko01120,map00230,map01100,map01120 M00546 R01768,R02103,R11168 RC00143,RC02800 ko00000,ko00001,ko00002,ko01000 - - - Fer2,Fer2_2 HKD3_k127_4968382_0 1382359.JIAL01000001_gene1908 5.681e-274 856.0 COG1506@1|root,COG1506@2|Bacteria,3Y3EW@57723|Acidobacteria,2JNZU@204432|Acidobacteriia 204432|Acidobacteriia E Dipeptidyl peptidase IV (DPP IV) N-terminal region - - - - - - - - - - - - DPPIV_N,Peptidase_S9 HKD3_k127_5005199_17 1379270.AUXF01000001_gene2260 3.788e-52 189.0 COG2318@1|root,COG2318@2|Bacteria,1ZUV6@142182|Gemmatimonadetes 142182|Gemmatimonadetes S DinB family - - - - - - - - - - - - DinB HKD3_k127_5005199_13 1384056.N787_06875 1.796e-74 260.0 arCOG08211@1|root,2ZBM3@2|Bacteria,1RIRV@1224|Proteobacteria,1SFXN@1236|Gammaproteobacteria,1X59H@135614|Xanthomonadales 135614|Xanthomonadales - - - - - - - - - - - - - - - HKD3_k127_5005199_12 448385.sce1085 4.313e-85 294.0 COG2006@1|root,COG2006@2|Bacteria,1QMGX@1224|Proteobacteria,42PRJ@68525|delta/epsilon subdivisions,2WMFN@28221|Deltaproteobacteria,2Z073@29|Myxococcales 28221|Deltaproteobacteria S Domain of unknown function (DUF362) - - - - - - - - - - - - DUF362 HKD3_k127_5005199_11 1121440.AUMA01000009_gene671 1.243e-89 306.0 COG0500@1|root,COG0500@2|Bacteria,1QW86@1224|Proteobacteria,42N1Q@68525|delta/epsilon subdivisions,2WJJS@28221|Deltaproteobacteria,2MA1B@213115|Desulfovibrionales 28221|Deltaproteobacteria Q O-methyltransferase, family 2 - - - - - - - - - - - - Dimerisation2,Methyltransf_2 HKD3_k127_5005199_22 1232410.KI421416_gene2621 9.512e-36 144.0 2EF9T@1|root,3392P@2|Bacteria,1P8J3@1224|Proteobacteria,4324V@68525|delta/epsilon subdivisions,2WYC0@28221|Deltaproteobacteria 28221|Deltaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_5005199_0 234267.Acid_3259 8.623e-297 923.0 COG1297@1|root,COG1297@2|Bacteria,3Y3SD@57723|Acidobacteria 57723|Acidobacteria S OPT oligopeptide transporter protein - - - - - - - - - - - - OPT HKD3_k127_5005199_6 452637.Oter_2238 4.4e-164 559.0 COG0441@1|root,COG0572@1|root,COG0441@2|Bacteria,COG0572@2|Bacteria 2|Bacteria F uridine kinase udk - 2.7.1.48 ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 - R00513,R00516,R00517,R00962,R00964,R00967,R00968,R00970,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PRK HKD3_k127_5005199_23 379066.GAU_3037 6.663e-35 136.0 COG2350@1|root,COG2350@2|Bacteria 2|Bacteria S YCII-related domain - - - ko:K09780 - - - - ko00000 - - - YCII HKD3_k127_5005199_4 234267.Acid_3623 3.428e-202 644.0 COG3653@1|root,COG3653@2|Bacteria,3Y3Q2@57723|Acidobacteria 57723|Acidobacteria Q D-aminoacylase domain protein - - 3.5.1.81,3.5.2.3 ko:K01465,ko:K06015 ko00240,ko01100,map00240,map01100 M00051 R01993,R02192 RC00064,RC00328,RC00632 ko00000,ko00001,ko00002,ko01000 - - - Amidohydro_3 HKD3_k127_5005199_1 314230.DSM3645_08942 4.987e-225 711.0 COG0405@1|root,COG0405@2|Bacteria,2IWWP@203682|Planctomycetes 203682|Planctomycetes E gamma-glutamyltransferase - - 2.3.2.2,3.4.19.13 ko:K00681 ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100 - R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935 RC00064,RC00090,RC00096 ko00000,ko00001,ko01000,ko01002 - - - G_glu_transpept HKD3_k127_5005199_18 1267534.KB906755_gene4288 7.614e-52 209.0 COG0524@1|root,COG0524@2|Bacteria,3Y659@57723|Acidobacteria,2JKSQ@204432|Acidobacteriia 204432|Acidobacteriia G pfkB family carbohydrate kinase - - 2.7.1.184 ko:K18478 - - R10970 RC00002,RC00017 ko00000,ko01000 - - - PfkB HKD3_k127_5005199_10 262724.TT_C1770 1.679e-93 321.0 COG0686@1|root,COG0686@2|Bacteria,1WIQ6@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus C Belongs to the AlaDH PNT family - - 1.4.1.1 ko:K00259 ko00250,ko00430,ko01100,map00250,map00430,map01100 - R00396 RC00008 ko00000,ko00001,ko01000 - - - AlaDh_PNT_C,AlaDh_PNT_N HKD3_k127_5005199_5 383372.Rcas_3773 2.369e-165 542.0 COG0427@1|root,COG0427@2|Bacteria,2G60V@200795|Chloroflexi,376DI@32061|Chloroflexia 32061|Chloroflexia C PFAM acetyl-CoA hydrolase transferase - - 3.1.2.1 ko:K01067 ko00620,map00620 - R00227 RC00004,RC00012 ko00000,ko00001,ko01000 - - - AcetylCoA_hyd_C,AcetylCoA_hydro HKD3_k127_5005199_19 1121013.P873_12075 9.975e-48 181.0 COG1215@1|root,COG1215@2|Bacteria 2|Bacteria M transferase activity, transferring glycosyl groups - - - - - - - - - - - - Glycos_transf_2 HKD3_k127_5005199_20 861299.J421_6079 6.128e-44 170.0 COG4242@1|root,COG4242@2|Bacteria,1ZUD4@142182|Gemmatimonadetes 142182|Gemmatimonadetes PQ Peptidase family S51 - - 3.4.15.6 ko:K13282 - - R09722 RC00064,RC00141 ko00000,ko01000,ko01002 - - - Peptidase_S51 HKD3_k127_5005199_3 1121920.AUAU01000009_gene1911 6.488e-217 691.0 COG3104@1|root,COG3104@2|Bacteria 2|Bacteria E oligopeptide transport - - - ko:K03305 - - - - ko00000 2.A.17 - - MFS_1 HKD3_k127_5005199_21 1283300.ATXB01000001_gene2112 2.72e-41 155.0 COG3411@1|root,COG3411@2|Bacteria,1MZR4@1224|Proteobacteria,1T12G@1236|Gammaproteobacteria 1236|Gammaproteobacteria C Ferredoxin - - - - - - - - - - - - - HKD3_k127_5005199_2 671143.DAMO_0874 5.002e-219 687.0 COG0065@1|root,COG0065@2|Bacteria,2NP2K@2323|unclassified Bacteria 2|Bacteria E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate leuC GO:0003674,GO:0003824,GO:0003861,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009316,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 4.2.1.33,4.2.1.35 ko:K01703 ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 M00432,M00535 R03896,R03898,R03968,R04001,R08620,R08624,R08628,R08634,R08641,R08645,R10170 RC00497,RC00976,RC00977,RC01041,RC01046,RC03072 br01601,ko00000,ko00001,ko00002,ko01000 - - iEcE24377_1341.EcE24377A_0075,iPC815.YPO0531,iSB619.SA_RS10700 Aconitase HKD3_k127_5005199_16 118166.JH976537_gene1463 7.904e-60 223.0 COG0066@1|root,COG0066@2|Bacteria,1G2Y2@1117|Cyanobacteria,1H95M@1150|Oscillatoriales 1117|Cyanobacteria E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate leuD - 4.2.1.33,4.2.1.35 ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R03896,R03898,R03968,R04001,R10170 RC00976,RC00977,RC01041,RC01046,RC03072 br01601,ko00000,ko00001,ko00002,ko01000 - - - Aconitase_C HKD3_k127_5005199_14 278963.ATWD01000001_gene1624 8.688e-73 255.0 COG0583@1|root,COG0583@2|Bacteria,3Y31P@57723|Acidobacteria,2JIC0@204432|Acidobacteriia 204432|Acidobacteriia K Transcriptional regulator, LysR - - - - - - - - - - - - HTH_1,LysR_substrate HKD3_k127_5005199_8 289376.THEYE_A0650 1.107e-139 456.0 COG0119@1|root,COG0119@2|Bacteria,3J0F7@40117|Nitrospirae 40117|Nitrospirae E Belongs to the alpha-IPM synthase homocitrate synthase family leuA - 2.3.3.13 ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 M00432 R01213 RC00004,RC00470,RC02754 br01601,ko00000,ko00001,ko00002,ko01000 - - - HMGL-like,LeuA_dimer HKD3_k127_5005199_9 1121920.AUAU01000037_gene2737 2.446e-120 397.0 COG0473@1|root,COG0473@2|Bacteria,3Y38Z@57723|Acidobacteria 57723|Acidobacteria CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate leuB - 1.1.1.85 ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R00994,R04426,R10052 RC00084,RC00417,RC03036 br01601,ko00000,ko00001,ko00002,ko01000 - - - Iso_dh HKD3_k127_5005199_15 378806.STAUR_6546 6.051e-71 258.0 COG3384@1|root,COG3384@2|Bacteria,1RB6Z@1224|Proteobacteria,43ACS@68525|delta/epsilon subdivisions,2X5SK@28221|Deltaproteobacteria,2YXTW@29|Myxococcales 28221|Deltaproteobacteria S Catalytic LigB subunit of aromatic ring-opening dioxygenase - - - ko:K15777 ko00965,map00965 - R08836 RC00387 ko00000,ko00001,ko01000 - - - LigB HKD3_k127_5005199_7 1047013.AQSP01000140_gene2494 4.757e-155 505.0 COG2234@1|root,COG2234@2|Bacteria,2NRCG@2323|unclassified Bacteria 2|Bacteria E Peptidase family M28 - - - - - - - - - - - - PA,Peptidase_M28 HKD3_k127_50152_3 1340493.JNIF01000004_gene151 5.06e-43 159.0 COG5557@1|root,COG5557@2|Bacteria,3Y3NS@57723|Acidobacteria 57723|Acidobacteria C PFAM Polysulphide reductase, NrfD - - - ko:K00185 - - - - ko00000 5.A.3 - - NrfD HKD3_k127_50152_1 1128421.JAGA01000003_gene2872 3.414e-70 243.0 COG2010@1|root,COG2010@2|Bacteria,2NPSE@2323|unclassified Bacteria 2|Bacteria C Protein of unknown function (DUF3341) - - - - - - - - - - - - DUF3341 HKD3_k127_50152_2 204669.Acid345_3000 2.196e-69 240.0 COG2010@1|root,COG2010@2|Bacteria,3Y2MN@57723|Acidobacteria,2JI6T@204432|Acidobacteriia 204432|Acidobacteriia C Cytochrome C oxidase, cbb3-type, subunit III - - - - - - - - - - - - Cytochrome_CBB3 HKD3_k127_50152_0 1128421.JAGA01000003_gene2874 2.095e-104 352.0 COG4531@1|root,COG4531@2|Bacteria,2NP5Y@2323|unclassified Bacteria 2|Bacteria P ABC-type Zn2 transport system, periplasmic component surface adhesin actF - - - - - - - - - - - - HKD3_k127_5020577_0 1198114.AciX9_1276 1.744e-77 264.0 COG1239@1|root,COG1239@2|Bacteria,3Y3FM@57723|Acidobacteria,2JHY2@204432|Acidobacteriia 204432|Acidobacteriia H Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX - - 6.6.1.1 ko:K03405 ko00860,ko01100,ko01110,map00860,map01100,map01110 - R03877 RC01012 ko00000,ko00001,ko01000 - - - Sigma54_activat HKD3_k127_5020577_1 204669.Acid345_2317 5.021e-36 142.0 COG2172@1|root,COG2172@2|Bacteria 2|Bacteria T sigma factor antagonist activity - - 2.7.11.1 ko:K04757,ko:K17752 - - - - ko00000,ko01000,ko01001,ko03021 - - - HATPase_c,HATPase_c_2,Response_reg,SpoIIE HKD3_k127_5020577_2 526224.Bmur_0482 2.129e-11 67.0 2DFN7@1|root,2ZSE0@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_5058694_5 756272.Plabr_2728 1.425e-05 47.0 COG1278@1|root,COG1278@2|Bacteria,2J13Y@203682|Planctomycetes 203682|Planctomycetes K COG1278 Cold shock - - - ko:K03704 - - - - ko00000,ko03000 - - - CSD HKD3_k127_5058694_2 1294143.H681_07380 5.157e-101 335.0 COG1794@1|root,COG1794@2|Bacteria,1MV03@1224|Proteobacteria,1RMHT@1236|Gammaproteobacteria 1236|Gammaproteobacteria M Belongs to the aspartate glutamate racemases family ygeA GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0030203,GO:0034645,GO:0036361,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0047661,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 5.1.1.13 ko:K01779 ko00250,ko01054,map00250,map01054 - R00491 RC00302 ko00000,ko00001,ko01000 - - - Asp_Glu_race HKD3_k127_5058694_3 246194.CHY_1233 6.138e-60 239.0 COG0685@1|root,COG0685@2|Bacteria,1UHX4@1239|Firmicutes,25E62@186801|Clostridia,42FH6@68295|Thermoanaerobacterales 186801|Clostridia C Methylenetetrahydrofolate reductase metF - 1.5.1.20 ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 M00377 R01224,R07168 RC00081 ko00000,ko00001,ko00002,ko01000 - - - MTHFR HKD3_k127_5058694_0 1382306.JNIM01000001_gene665 0.0 1219.0 COG0646@1|root,COG1410@1|root,COG0646@2|Bacteria,COG1410@2|Bacteria,2G5Y6@200795|Chloroflexi 200795|Chloroflexi H Methionine synthase B12-binding module cap domain protein - - 2.1.1.13,2.1.1.258 ko:K00548,ko:K15023 ko00270,ko00450,ko00670,ko00720,ko01100,ko01110,ko01120,ko01200,ko01230,map00270,map00450,map00670,map00720,map01100,map01110,map01120,map01200,map01230 M00017,M00377 R00946,R02289,R09365,R10243 RC00004,RC00035,RC00113,RC01144,RC01241,RC02871,RC02977 ko00000,ko00001,ko00002,ko01000 - - - B12-binding,B12-binding_2,Met_synt_B12,Pterin_bind,S-methyl_trans HKD3_k127_5058694_1 1121481.AUAS01000016_gene2629 7.77e-123 409.0 COG0477@1|root,COG2814@2|Bacteria,4NE09@976|Bacteroidetes,47MBV@768503|Cytophagia 976|Bacteroidetes EGP Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family xylE - - ko:K02100,ko:K03444,ko:K08138 - - - - ko00000,ko02000 2.A.1.1,2.A.1.1.2,2.A.1.1.3 - - Sugar_tr HKD3_k127_5058694_4 926550.CLDAP_30280 1.577e-37 160.0 COG2971@1|root,COG2971@2|Bacteria,2G6Y6@200795|Chloroflexi 200795|Chloroflexi G BadF/BadG/BcrA/BcrD ATPase family - - - - - - - - - - - - BcrAD_BadFG HKD3_k127_5058694_6 1005994.GTGU_01699 1.999e-05 53.0 COG1482@1|root,COG1482@2|Bacteria,1P6JR@1224|Proteobacteria,1RYBP@1236|Gammaproteobacteria 1236|Gammaproteobacteria G mannose-6-phosphate isomerase - - - - - - - - - - - - - HKD3_k127_5059304_0 1254432.SCE1572_23550 0.0 1361.0 COG0493@1|root,COG0543@1|root,COG0493@2|Bacteria,COG0543@2|Bacteria,1Q2ZJ@1224|Proteobacteria,438P5@68525|delta/epsilon subdivisions,2X8TH@28221|Deltaproteobacteria,2YXE6@29|Myxococcales 28221|Deltaproteobacteria CEH Pyridine nucleotide-disulphide oxidoreductase - - - - - - - - - - - - Pyr_redox_2 HKD3_k127_5059304_3 517418.Ctha_1363 2.146e-14 85.0 COG1254@1|root,COG1254@2|Bacteria,1FEAS@1090|Chlorobi 1090|Chlorobi C Belongs to the acylphosphatase family - - 3.6.1.7 ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 - R00317,R01421,R01515 RC00043 ko00000,ko00001,ko01000 - - - Acylphosphatase HKD3_k127_5059304_1 1340493.JNIF01000004_gene1003 9.191e-58 211.0 COG0503@1|root,COG0503@2|Bacteria,3Y30R@57723|Acidobacteria 57723|Acidobacteria F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis apt - 2.4.2.7 ko:K00759 ko00230,ko01100,map00230,map01100 - R00190,R01229,R04378 RC00063 ko00000,ko00001,ko01000,ko04147 - - - Pribosyltran HKD3_k127_5059304_2 289376.THEYE_A2098 3.498e-26 121.0 COG2885@1|root,COG2885@2|Bacteria,3J17Q@40117|Nitrospirae 40117|Nitrospirae M Belongs to the ompA family - - - ko:K03640 - - - - ko00000,ko02000 2.C.1.2 - - OmpA HKD3_k127_5112206_2 344747.PM8797T_32305 4.552e-45 169.0 COG1215@1|root,COG1215@2|Bacteria,2IXXE@203682|Planctomycetes 203682|Planctomycetes M PFAM Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 HKD3_k127_5112206_0 1125863.JAFN01000001_gene1044 5.122e-117 386.0 COG1087@1|root,COG1087@2|Bacteria,1MUHI@1224|Proteobacteria,42N94@68525|delta/epsilon subdivisions,2WJH4@28221|Deltaproteobacteria 28221|Deltaproteobacteria M Belongs to the NAD(P)-dependent epimerase dehydratase family galE - 5.1.3.2,5.1.3.5 ko:K01784,ko:K12448 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R01473,R02984 RC00289,RC00528 ko00000,ko00001,ko00002,ko01000 - - - Epimerase,GDP_Man_Dehyd HKD3_k127_5112206_1 290397.Adeh_4305 1.286e-85 288.0 COG1004@1|root,COG1004@2|Bacteria,1MW5U@1224|Proteobacteria,42MDV@68525|delta/epsilon subdivisions,2WJ3T@28221|Deltaproteobacteria,2YZCY@29|Myxococcales 28221|Deltaproteobacteria C UDP binding domain ugd - 1.1.1.22 ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 M00014,M00129,M00361,M00362 R00286 RC00291 ko00000,ko00001,ko00002,ko01000 - - - UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N HKD3_k127_5114284_0 760192.Halhy_2059 1.449e-263 829.0 COG4447@1|root,COG4447@2|Bacteria,4NESU@976|Bacteroidetes,1IW7V@117747|Sphingobacteriia 976|Bacteroidetes S Sortilin, neurotensin receptor 3, - - - - - - - - - - - - Sortilin-Vps10 HKD3_k127_5114284_3 1192034.CAP_4308 1.434e-112 391.0 COG1409@1|root,COG1409@2|Bacteria,1R4EJ@1224|Proteobacteria 1224|Proteobacteria S Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - - - - - - - - - - Metallophos HKD3_k127_5114284_6 526227.Mesil_0100 6.356e-43 161.0 COG2905@1|root,COG2905@2|Bacteria,1WJV4@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus T signal-transduction protein containing cAMP-binding and CBS domains - - - - - - - - - - - - CBS HKD3_k127_5114284_5 290397.Adeh_0200 7.68e-77 269.0 COG1612@1|root,COG1612@2|Bacteria,1PV6F@1224|Proteobacteria,4303Y@68525|delta/epsilon subdivisions,2WVAK@28221|Deltaproteobacteria,2YUJ2@29|Myxococcales 28221|Deltaproteobacteria O cytochrome oxidase assembly ctaA - - ko:K02259 ko00190,ko00860,ko01100,ko01110,ko02020,ko04714,map00190,map00860,map01100,map01110,map02020,map04714 M00154 R07412 RC00769 ko00000,ko00001,ko00002,ko03029 3.D.4.4 - - COX15-CtaA HKD3_k127_5114284_4 1340434.AXVA01000005_gene4748 2.384e-77 265.0 COG0274@1|root,COG0274@2|Bacteria,1TPAJ@1239|Firmicutes,4HAAJ@91061|Bacilli,1ZCZ6@1386|Bacillus 91061|Bacilli F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate deoC - 4.1.2.4 ko:K01619 ko00030,map00030 - R01066 RC00436,RC00437 ko00000,ko00001,ko01000 - - - DeoC HKD3_k127_5114284_8 1280390.CBQR020000033_gene723 5.727e-13 72.0 2EGKD@1|root,33ACM@2|Bacteria,1VKRN@1239|Firmicutes,4HSEX@91061|Bacilli 91061|Bacilli - - - - - - - - - - - - - - - HKD3_k127_5114284_2 1408473.JHXO01000005_gene1746 1.143e-119 403.0 COG3119@1|root,COG3119@2|Bacteria,4NFRB@976|Bacteroidetes,2FQ3G@200643|Bacteroidia 976|Bacteroidetes P Arylsulfatase - - 3.1.6.1 ko:K01130 ko00140,ko00600,map00140,map00600 - R03980,R04856 RC00128,RC00231 ko00000,ko00001,ko01000 - - - Sulfatase,Sulfatase_C HKD3_k127_5114284_1 1040989.AWZU01000057_gene5068 6.281e-128 417.0 COG2706@1|root,COG2706@2|Bacteria,1MUKZ@1224|Proteobacteria,2U0UA@28211|Alphaproteobacteria,3JXGE@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria G Lactonase, 7-bladed beta-propeller - - - - - - - - - - - - Lactonase HKD3_k127_5117560_10 1122603.ATVI01000005_gene3502 1.221e-20 102.0 COG0457@1|root,COG5616@1|root,COG0457@2|Bacteria,COG5616@2|Bacteria,1MUMZ@1224|Proteobacteria,1T5SE@1236|Gammaproteobacteria,1XDE6@135614|Xanthomonadales 135614|Xanthomonadales S Tetratricopeptide repeat - - - - - - - - - - - - TPR_19 HKD3_k127_5117560_7 686340.Metal_3696 1.177e-32 132.0 2ED2F@1|root,336ZC@2|Bacteria,1N758@1224|Proteobacteria,1SE5R@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Protein of unknown function (DUF2442) - - - - - - - - - - - - DUF2442 HKD3_k127_5117560_6 316067.Geob_1146 1.866e-35 143.0 COG1487@1|root,COG1487@2|Bacteria,1RIB5@1224|Proteobacteria,42W91@68525|delta/epsilon subdivisions,2WRAU@28221|Deltaproteobacteria 28221|Deltaproteobacteria S PIN domain - - - ko:K07062 - - - - ko00000,ko01000,ko02048 - - - PIN HKD3_k127_5117560_8 1304885.AUEY01000093_gene1587 2.608e-24 104.0 COG2161@1|root,COG2161@2|Bacteria,1NBSZ@1224|Proteobacteria,4332I@68525|delta/epsilon subdivisions,2WXB2@28221|Deltaproteobacteria,2MPCN@213118|Desulfobacterales 28221|Deltaproteobacteria D Antitoxin Phd_YefM, type II toxin-antitoxin system - - - - - - - - - - - - PhdYeFM_antitox HKD3_k127_5117560_4 215803.DB30_5952 1.622e-68 242.0 COG4636@1|root,COG4636@2|Bacteria,1RCFH@1224|Proteobacteria,437EF@68525|delta/epsilon subdivisions,2X2KT@28221|Deltaproteobacteria,2Z042@29|Myxococcales 28221|Deltaproteobacteria S Putative restriction endonuclease - - - - - - - - - - - - Uma2 HKD3_k127_5117560_0 760192.Halhy_2059 3.633e-242 777.0 COG4447@1|root,COG4447@2|Bacteria,4NESU@976|Bacteroidetes,1IW7V@117747|Sphingobacteriia 976|Bacteroidetes S Sortilin, neurotensin receptor 3, - - - - - - - - - - - - Sortilin-Vps10 HKD3_k127_5117560_9 234267.Acid_6834 1.887e-23 115.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,3Y3FE@57723|Acidobacteria 2|Bacteria KU WD40 domain protein beta Propeller - - 2.7.11.1 ko:K08884,ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PD40,Pkinase,WD40 HKD3_k127_5117560_2 234267.Acid_0024 4.127e-87 316.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,3Y3FE@57723|Acidobacteria 2|Bacteria KU WD40 domain protein beta Propeller - - 2.7.11.1 ko:K08884,ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PD40,Pkinase,WD40 HKD3_k127_5117560_5 419947.MRA_1849 2.106e-48 176.0 COG1848@1|root,COG1848@2|Bacteria 2|Bacteria G Toxic component of a toxin-antitoxin (TA) module. An RNase - GO:0005575,GO:0005576 - ko:K07064 - - - - ko00000 - - - PIN HKD3_k127_5117560_11 419947.MRA_1850 2.559e-18 87.0 2BE1Z@1|root,327SM@2|Bacteria,2HDGJ@201174|Actinobacteria 201174|Actinobacteria - - - - - - - - - - - - - - - HKD3_k127_5117560_3 204669.Acid345_1536 9.699e-83 295.0 COG0531@1|root,COG0531@2|Bacteria,3Y4PR@57723|Acidobacteria,2JJPB@204432|Acidobacteriia 204432|Acidobacteriia E Amino acid permease - - - ko:K20265 ko02024,map02024 - - - ko00000,ko00001,ko02000 2.A.3.7.1,2.A.3.7.3 - - AA_permease_2 HKD3_k127_5117560_1 383372.Rcas_0264 1.041e-128 441.0 COG5184@1|root,COG5184@2|Bacteria,2G8WU@200795|Chloroflexi,3765G@32061|Chloroflexia 32061|Chloroflexia DZ PFAM regulator of chromosome condensation, RCC1 - - - - - - - - - - - - - HKD3_k127_5133237_1 1198232.CYCME_1453 5.017e-36 145.0 COG1232@1|root,COG1232@2|Bacteria,1QX3T@1224|Proteobacteria,1T3RT@1236|Gammaproteobacteria 1236|Gammaproteobacteria H Flavin containing amine oxidoreductase - - - - - - - - - - - - Amino_oxidase HKD3_k127_5133237_0 211165.AJLN01000104_gene6576 3.056e-99 335.0 COG1216@1|root,COG1216@2|Bacteria,1G0PG@1117|Cyanobacteria 1117|Cyanobacteria M Glycosyl transferase, family 2 - - - - - - - - - - - - Glycos_transf_2 HKD3_k127_5146432_0 1121920.AUAU01000004_gene856 2.413e-202 636.0 COG0065@1|root,COG0065@2|Bacteria 2|Bacteria E 3-isopropylmalate dehydratase activity hacA - 4.2.1.33,4.2.1.35 ko:K01703 ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 M00432,M00535 R03896,R03898,R03968,R04001,R08620,R08624,R08628,R08634,R08641,R08645,R10170 RC00497,RC00976,RC00977,RC01041,RC01046,RC03072 br01601,ko00000,ko00001,ko00002,ko01000 - - - Aconitase HKD3_k127_5146432_2 1121920.AUAU01000004_gene855 3.957e-53 208.0 COG0066@1|root,COG0066@2|Bacteria 2|Bacteria E 3-isopropylmalate dehydratase activity leuD - 4.2.1.33,4.2.1.35 ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R03896,R03898,R03968,R04001,R10170 RC00976,RC00977,RC01041,RC01046,RC03072 br01601,ko00000,ko00001,ko00002,ko01000 - - - Aconitase_C HKD3_k127_5146432_3 196490.AUEZ01000005_gene3573 5.781e-10 71.0 COG0071@1|root,COG0071@2|Bacteria,1N7C7@1224|Proteobacteria,2UFRX@28211|Alphaproteobacteria,3JYE3@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria O Hsp20/alpha crystallin family - - - ko:K13993 ko04141,map04141 - - - ko00000,ko00001,ko03110 - - - HSP20 HKD3_k127_5146432_1 264732.Moth_1083 2.037e-75 271.0 COG1692@1|root,COG1692@2|Bacteria,1TR9P@1239|Firmicutes,24967@186801|Clostridia,42EQD@68295|Thermoanaerobacterales 186801|Clostridia S PFAM Metallophosphoesterase - - - ko:K09769 - - - - ko00000 - - - YmdB HKD3_k127_5146985_1 292415.Tbd_0010 2.413e-45 171.0 COG0550@1|root,COG1754@1|root,COG0550@2|Bacteria,COG1754@2|Bacteria,1MUFZ@1224|Proteobacteria,2VHUF@28216|Betaproteobacteria 28216|Betaproteobacteria L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone topA - 5.99.1.2 ko:K03168 - - - - ko00000,ko01000,ko03032,ko03400 - - - Topoisom_bac,Toprim,Toprim_C_rpt,zf-C4_Topoisom HKD3_k127_5146985_0 1120971.AUCA01000011_gene2979 1.665e-159 513.0 COG1206@1|root,COG1206@2|Bacteria,1TP67@1239|Firmicutes,4HB27@91061|Bacilli,277XV@186823|Alicyclobacillaceae 91061|Bacilli J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs trmFO GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 ko:K04094 - - - - ko00000,ko01000,ko03016,ko03036 - - - GIDA HKD3_k127_5151521_1 1242864.D187_007692 9.252e-94 317.0 COG1893@1|root,COG1893@2|Bacteria,1MX5M@1224|Proteobacteria,42UE5@68525|delta/epsilon subdivisions,2WQDA@28221|Deltaproteobacteria,2Z36R@29|Myxococcales 28221|Deltaproteobacteria H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - 1.1.1.169 ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R02472 RC00726 ko00000,ko00001,ko00002,ko01000 - - - ApbA,ApbA_C HKD3_k127_5151521_2 323848.Nmul_A2615 4.96e-79 278.0 COG0560@1|root,COG0560@2|Bacteria,1RA1A@1224|Proteobacteria,2VMGV@28216|Betaproteobacteria,3723W@32003|Nitrosomonadales 28216|Betaproteobacteria E TIGRFAM HAD-superfamily hydrolase, subfamily IB (PSPase-like) - - - - - - - - - - - - HAD HKD3_k127_5151521_0 251221.35210936 1.343e-130 439.0 COG1574@1|root,COG1574@2|Bacteria,1G40U@1117|Cyanobacteria 1117|Cyanobacteria S Amidohydrolase family - - - - - - - - - - - - Amidohydro_3 HKD3_k127_523781_2 1125863.JAFN01000001_gene1090 1.425e-85 301.0 COG0618@1|root,COG0618@2|Bacteria,1N0JS@1224|Proteobacteria,42P1S@68525|delta/epsilon subdivisions,2WJV0@28221|Deltaproteobacteria 28221|Deltaproteobacteria S PFAM phosphoesterase, RecJ domain protein - - - - - - - - - - - - DHH,DHHA1 HKD3_k127_523781_6 1042209.HK44_003460 0.0009347 51.0 COG1752@1|root,COG1752@2|Bacteria,1MX8Y@1224|Proteobacteria,1RUPZ@1236|Gammaproteobacteria,1YRS6@136843|Pseudomonas fluorescens group 1236|Gammaproteobacteria S Patatin-like phospholipase - - - - - - - - - - - - Patatin HKD3_k127_523781_3 1382359.JIAL01000001_gene880 1.204e-48 179.0 COG0782@1|root,COG0782@2|Bacteria,3Y49X@57723|Acidobacteria,2JJ1A@204432|Acidobacteriia 204432|Acidobacteriia K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides greA - - ko:K03624 - - - - ko00000,ko03021 - - - GreA_GreB,GreA_GreB_N HKD3_k127_523781_4 1122611.KB904007_gene7775 1.078e-31 135.0 COG0566@1|root,COG0566@2|Bacteria,2GJI6@201174|Actinobacteria,4EH5S@85012|Streptosporangiales 201174|Actinobacteria J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family tsnR - - ko:K03437 - - - - ko00000,ko03016 - - - SpoU_methylase,SpoU_sub_bind HKD3_k127_523781_0 555079.Toce_0666 4.769e-165 531.0 COG2256@1|root,COG2256@2|Bacteria,1TPVV@1239|Firmicutes,247X2@186801|Clostridia,42FF6@68295|Thermoanaerobacterales 186801|Clostridia L AAA ATPase, central domain protein rarA - - ko:K07478 - - - - ko00000 - - - AAA,AAA_assoc_2,MgsA_C,RuvB_N HKD3_k127_523781_1 1382359.JIAL01000001_gene816 2.385e-126 426.0 COG0323@1|root,COG0323@2|Bacteria,3Y2T3@57723|Acidobacteria,2JI29@204432|Acidobacteriia 204432|Acidobacteriia L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex mutL - - ko:K03572 ko03430,map03430 - - - ko00000,ko00001,ko03400 - - - DNA_mis_repair,HATPase_c_3,MutL_C HKD3_k127_523781_5 1131814.JAFO01000001_gene1435 2.997e-05 47.0 COG0598@1|root,COG0598@2|Bacteria,1MW8W@1224|Proteobacteria,2U20B@28211|Alphaproteobacteria,3EY7K@335928|Xanthobacteraceae 28211|Alphaproteobacteria P CorA-like Mg2+ transporter protein - - - ko:K16074 - - - - ko00000,ko02000 1.A.35.4 - - CorA HKD3_k127_5260544_7 379066.GAU_0228 2.795e-10 68.0 COG1680@1|root,COG1680@2|Bacteria,1ZUDN@142182|Gemmatimonadetes 142182|Gemmatimonadetes V Beta-lactamase - - - - - - - - - - - - Beta-lactamase HKD3_k127_5260544_0 1379698.RBG1_1C00001G1677 9.123e-104 347.0 COG3239@1|root,COG3239@2|Bacteria,2NNTZ@2323|unclassified Bacteria 2|Bacteria I Fatty acid desaturase des - 1.14.19.23,1.14.19.45 ko:K10255 ko02020,map02020 - - - ko00000,ko00001,ko01000,ko01004 - - - FA_desaturase HKD3_k127_5260544_5 1267535.KB906767_gene4763 1.171e-31 139.0 COG0457@1|root,COG0457@2|Bacteria,3Y3JH@57723|Acidobacteria,2JI8K@204432|Acidobacteriia 204432|Acidobacteriia S Tetratricopeptide repeat - - - - - - - - - - - - TPR_16 HKD3_k127_5260544_1 1169144.KB910957_gene3884 1.118e-100 338.0 COG3938@1|root,COG3938@2|Bacteria,1TQ61@1239|Firmicutes,4HCR7@91061|Bacilli,1ZDCA@1386|Bacillus 91061|Bacilli E Proline racemase - GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0018112,GO:0019752,GO:0036361,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0047661,GO:0071704,GO:1901564 5.1.1.4 ko:K01777 ko00330,ko01100,map00330,map01100 - R01255 RC00479 ko00000,ko00001,ko01000 - - - Pro_racemase HKD3_k127_5260544_6 1267535.KB906767_gene3620 1.596e-19 100.0 COG1965@1|root,COG1965@2|Bacteria 2|Bacteria P Belongs to the frataxin family cyaY GO:0003674,GO:0003824,GO:0004322,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006790,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008198,GO:0008199,GO:0009987,GO:0016043,GO:0016226,GO:0016491,GO:0016530,GO:0016722,GO:0016724,GO:0018282,GO:0018283,GO:0019538,GO:0019725,GO:0022607,GO:0030003,GO:0031163,GO:0033554,GO:0034599,GO:0034986,GO:0036211,GO:0042221,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0050896,GO:0051186,GO:0051536,GO:0051537,GO:0051540,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071704,GO:0071840,GO:0098771,GO:0140104,GO:1901564 1.16.3.1 ko:K06202,ko:K19054 ko00860,map00860 - R00078 RC02758 ko00000,ko00001,ko01000,ko03029 - - iECW_1372.ECW_m4108,iEKO11_1354.EKO11_4552,iWFL_1372.ECW_m4108 Frataxin_Cyay HKD3_k127_5260544_4 204669.Acid345_2058 1.792e-32 139.0 COG2304@1|root,COG2304@2|Bacteria,3Y38P@57723|Acidobacteria,2JIRN@204432|Acidobacteriia 204432|Acidobacteriia S von Willebrand factor, type A - - - ko:K07114 - - - - ko00000,ko02000 1.A.13.2.2,1.A.13.2.3 - - VWA,VWA_2 HKD3_k127_5260544_2 1121930.AQXG01000001_gene1105 7.483e-75 282.0 COG1470@1|root,COG1629@1|root,COG1470@2|Bacteria,COG4771@2|Bacteria,4NFQD@976|Bacteroidetes,1IPUD@117747|Sphingobacteriia 976|Bacteroidetes P TonB-dependent receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - CarbopepD_reg_2,Plug,TonB_dep_Rec HKD3_k127_5283533_0 1047013.AQSP01000126_gene2731 7.592e-185 587.0 COG0446@1|root,COG1142@1|root,COG1251@1|root,COG2080@1|root,COG0446@2|Bacteria,COG1142@2|Bacteria,COG1251@2|Bacteria,COG2080@2|Bacteria,2NP2E@2323|unclassified Bacteria 2|Bacteria C FAD dependent oxidoreductase - - 1.12.5.1,1.2.5.3,1.3.99.16,1.7.1.15 ko:K00205,ko:K00362,ko:K02573,ko:K03518,ko:K05927,ko:K07302 ko00680,ko00910,ko01100,ko01120,ko01200,map00680,map00910,map01100,map01120,map01200 M00530,M00567 R00787,R03015,R08060,R11168,R11743 RC00176,RC00197,RC00323,RC02800 ko00000,ko00001,ko00002,ko01000 - - - Fer2,Fer2_2,Fer2_4,Fer2_BFD,Fer4,Fer4_20,Fer4_7,GXGXG,NiFe_hyd_SSU_C,Oxidored_q6,Pyr_redox_2 HKD3_k127_5283533_1 1499967.BAYZ01000149_gene6774 9.608e-137 449.0 COG0665@1|root,COG0665@2|Bacteria,2NP0X@2323|unclassified Bacteria 2|Bacteria E FAD dependent oxidoreductase - - 1.5.3.1 ko:K00303 ko00260,ko01100,map00260,map01100 - R00610 RC00060,RC00557 ko00000,ko00001,ko01000 - - - DAO,Fer2_BFD HKD3_k127_5295463_1 945713.IALB_2152 1.684e-118 389.0 COG2309@1|root,COG2309@2|Bacteria 2|Bacteria E aminopeptidase activity - - - - - - - - - - - - Peptidase_M29 HKD3_k127_5295463_5 204669.Acid345_1027 3.228e-26 116.0 COG1595@1|root,COG1595@2|Bacteria,3Y4HK@57723|Acidobacteria,2JJAJ@204432|Acidobacteriia 204432|Acidobacteriia K TIGRFAM RNA polymerase sigma factor, sigma-70 family - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 HKD3_k127_5295463_6 204669.Acid345_1029 1.129e-07 64.0 2DMGW@1|root,32REM@2|Bacteria,3Y4XX@57723|Acidobacteria,2JJER@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - zf-B_box HKD3_k127_5295463_2 234267.Acid_5500 7.643e-78 274.0 COG0652@1|root,COG0652@2|Bacteria 2|Bacteria O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides ppiB - 5.2.1.8 ko:K01802,ko:K03767,ko:K03768 ko01503,ko04217,map01503,map04217 - - - ko00000,ko00001,ko01000,ko03110,ko04147 - - - HemolysinCabind,Pro_isomerase HKD3_k127_5295463_3 1121405.dsmv_3775 1.371e-70 244.0 COG2080@1|root,COG2080@2|Bacteria,1RD8C@1224|Proteobacteria,42S8R@68525|delta/epsilon subdivisions,2X5W1@28221|Deltaproteobacteria,2MK5S@213118|Desulfobacterales 28221|Deltaproteobacteria C [2Fe-2S] binding domain - - 1.3.99.16 ko:K07302,ko:K13483 ko00230,ko01100,ko01120,map00230,map01100,map01120 M00546 R01768,R02103 RC00143 ko00000,ko00001,ko00002,ko01000 - - - Fer2,Fer2_2 HKD3_k127_5295463_0 706587.Desti_3922 6.957e-285 894.0 COG1529@1|root,COG1529@2|Bacteria,1MUEA@1224|Proteobacteria,42MER@68525|delta/epsilon subdivisions,2WIYV@28221|Deltaproteobacteria,2MR87@213462|Syntrophobacterales 28221|Deltaproteobacteria C aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - 1.17.1.4 ko:K11177 ko00230,ko01100,ko01120,map00230,map01100,map01120 M00546 R01768,R02103 RC00143 ko00000,ko00001,ko00002,ko01000 - - - Ald_Xan_dh_C,Ald_Xan_dh_C2,Fer2_2 HKD3_k127_5295463_4 706587.Desti_3923 4.82e-47 182.0 COG1319@1|root,COG1319@2|Bacteria,1MVJS@1224|Proteobacteria,42RX4@68525|delta/epsilon subdivisions,2WNBJ@28221|Deltaproteobacteria,2MQZF@213462|Syntrophobacterales 28221|Deltaproteobacteria C CO dehydrogenase flavoprotein C-terminal domain - - 1.17.1.4 ko:K11178 ko00230,ko01100,ko01120,map00230,map01100,map01120 M00546 R01768,R02103 RC00143 ko00000,ko00001,ko00002,ko01000 - - - CO_deh_flav_C,FAD_binding_5 HKD3_k127_5299401_6 977880.RALTA_A0015 5.773e-08 62.0 COG2020@1|root,COG2020@2|Bacteria,1R47K@1224|Proteobacteria,2VPZR@28216|Betaproteobacteria,1K6ZR@119060|Burkholderiaceae 28216|Betaproteobacteria O isoprenylcysteine carboxyl methyltransferase - - - - - - - - - - - - ICMT,PEMT HKD3_k127_5299401_2 1047013.AQSP01000120_gene937 1.323e-182 579.0 COG4030@1|root,COG4030@2|Bacteria 2|Bacteria M Protein of unknown function (DUF2961) - - - - - - - - - - - - DUF2961 HKD3_k127_5299401_1 234267.Acid_1003 7.32e-215 682.0 COG2407@1|root,COG2407@2|Bacteria,3Y63P@57723|Acidobacteria 57723|Acidobacteria G Converts the aldose L-fucose into the corresponding ketose L-fuculose - - - - - - - - - - - - - HKD3_k127_5299401_0 1047013.AQSP01000092_gene315 0.0 1040.0 COG3250@1|root,COG3250@2|Bacteria,2NQEM@2323|unclassified Bacteria 2|Bacteria G Glycosyl hydrolases family 2, TIM barrel domain lacZ GO:0003674,GO:0003824,GO:0004553,GO:0004565,GO:0005575,GO:0005975,GO:0005984,GO:0005988,GO:0005990,GO:0008150,GO:0008152,GO:0009056,GO:0009311,GO:0009313,GO:0009341,GO:0009987,GO:0015925,GO:0016052,GO:0016787,GO:0016798,GO:0032991,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0046352,GO:0071704,GO:1901575,GO:1902494 3.2.1.23,3.2.1.31 ko:K01190,ko:K01195 ko00040,ko00052,ko00511,ko00531,ko00600,ko00860,ko00944,ko00983,ko01100,ko01110,ko04142,map00040,map00052,map00511,map00531,map00600,map00860,map00944,map00983,map01100,map01110,map04142 M00014,M00076,M00077,M00078,M00129 R01105,R01478,R01678,R03355,R04783,R04979,R06114,R07818,R08127,R08260,R10830 RC00049,RC00055,RC00171,RC00452,RC00529,RC00530,RC00714,RC01251 ko00000,ko00001,ko00002,ko01000 - - - Bgal_small_N,DUF4981,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N HKD3_k127_5299401_7 290315.Clim_1059 1.252e-07 63.0 COG1452@1|root,COG1452@2|Bacteria,1FEGW@1090|Chlorobi 1090|Chlorobi M Putative MetA-pathway of phenol degradation - - - - - - - - - - - - Phenol_MetA_deg HKD3_k127_5299401_5 234267.Acid_1239 5.404e-44 185.0 COG2208@1|root,COG2208@2|Bacteria 2|Bacteria T phosphoserine phosphatase activity icfG - 3.1.3.3 ko:K07315 - - - - ko00000,ko01000,ko03021 - - - GAF,GAF_2,HAMP,Response_reg,SpoIIE HKD3_k127_5299401_3 1047013.AQSP01000019_gene976 1.486e-107 376.0 COG0616@1|root,COG0616@2|Bacteria,2NNKU@2323|unclassified Bacteria 2|Bacteria OU Peptidase family S49 sppA - - ko:K04773 - - - - ko00000,ko01000,ko01002 - - - Peptidase_S49 HKD3_k127_5299401_4 338963.Pcar_1050 3.914e-84 303.0 COG0760@1|root,COG0760@2|Bacteria,1MWV0@1224|Proteobacteria,42MPK@68525|delta/epsilon subdivisions,2WJM1@28221|Deltaproteobacteria,43RYI@69541|Desulfuromonadales 28221|Deltaproteobacteria O SurA N-terminal domain nifM - 5.2.1.8 ko:K03770 - - - - ko00000,ko01000,ko03110 - - - Rotamase,Rotamase_2,Rotamase_3,SurA_N_3 HKD3_k127_531178_0 795666.MW7_1847 3.135e-62 225.0 COG1562@1|root,COG1562@2|Bacteria,1MX4W@1224|Proteobacteria,2VJ13@28216|Betaproteobacteria,1JZMV@119060|Burkholderiaceae 28216|Betaproteobacteria I Phytoene synthase hpnD - 2.5.1.32,2.5.1.99 ko:K02291 ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110 M00097 R02065,R04218,R07270,R10177 RC00362,RC01101,RC02869 ko00000,ko00001,ko00002,ko01000,ko01006 - - - SQS_PSY HKD3_k127_531178_1 391625.PPSIR1_11225 3.125e-43 172.0 COG1232@1|root,COG1232@2|Bacteria,1NQUH@1224|Proteobacteria 1224|Proteobacteria H squalene-associated FAD-dependent desaturase hpnE - 1.17.8.1 ko:K21677 - - - - ko00000,ko01000 - - - Amino_oxidase HKD3_k127_5323695_4 518766.Rmar_2391 2.95e-40 151.0 COG5434@1|root,COG5434@2|Bacteria,4NEM8@976|Bacteroidetes 976|Bacteroidetes G Belongs to the glycosyl hydrolase 28 family - - - - - - - - - - - - Glyco_hydro_28,Glyco_hydro_88,Pectate_lyase_3 HKD3_k127_5323695_1 883126.HMPREF9710_04662 1.165e-118 397.0 COG4225@1|root,COG4225@2|Bacteria,1MU2J@1224|Proteobacteria 1224|Proteobacteria S Glycosyl Hydrolase Family 88 - - - - - - - - - - - - Glyco_hydro_88 HKD3_k127_5323695_3 452637.Oter_4265 1.234e-73 263.0 COG4677@1|root,COG4677@2|Bacteria 2|Bacteria G pectinesterase activity - - - - - - - - - - - - DUF4861 HKD3_k127_5323695_5 404589.Anae109_1581 3.034e-25 111.0 COG0425@1|root,COG0425@2|Bacteria,1N08X@1224|Proteobacteria,42RUG@68525|delta/epsilon subdivisions,2WNNK@28221|Deltaproteobacteria 28221|Deltaproteobacteria O Belongs to the sulfur carrier protein TusA family yedF - - - - - - - - - - - DrsE,TusA HKD3_k127_5323695_2 883126.HMPREF9710_04582 3.738e-99 338.0 COG0657@1|root,COG0657@2|Bacteria,1N5QB@1224|Proteobacteria,2VPXR@28216|Betaproteobacteria,474PV@75682|Oxalobacteraceae 28216|Betaproteobacteria I alpha/beta hydrolase fold xynB - - - - - - - - - - - Abhydrolase_3,Peptidase_S9 HKD3_k127_5323695_0 861299.J421_5624 2.263e-176 567.0 COG4948@1|root,COG4948@2|Bacteria 2|Bacteria M carboxylic acid catabolic process - - 3.2.1.20 ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 - R00028,R00801,R00802,R06087,R06088 RC00028,RC00049,RC00077 ko00000,ko00001,ko01000 - GH31 - GH97_C,GH97_N,Glyco_hydro_97 HKD3_k127_5330200_3 1121104.AQXH01000002_gene717 2.114e-133 437.0 COG4447@1|root,COG4447@2|Bacteria,4NESU@976|Bacteroidetes,1IW7V@117747|Sphingobacteriia 976|Bacteroidetes S Sortilin, neurotensin receptor 3, - - - - - - - - - - - - Sortilin-Vps10 HKD3_k127_5330200_10 1249627.D779_3486 5.22e-21 99.0 COG1863@1|root,COG1863@2|Bacteria,1N7MB@1224|Proteobacteria,1SCQX@1236|Gammaproteobacteria,1WYUR@135613|Chromatiales 135613|Chromatiales P PFAM cation antiporter - - - ko:K05569 - - - - ko00000,ko02000 2.A.63.1,2.A.63.2 - - MNHE HKD3_k127_5330200_12 1121878.AUGL01000001_gene468 5.329e-05 50.0 COG2212@1|root,COG2212@2|Bacteria,1N90U@1224|Proteobacteria,1SCXI@1236|Gammaproteobacteria 1236|Gammaproteobacteria P Multiple resistance and pH regulation protein F - - - ko:K05570 - - - - ko00000,ko02000 2.A.63.1,2.A.63.2 - - MrpF_PhaF HKD3_k127_5330200_9 648757.Rvan_1093 3.081e-27 114.0 COG1320@1|root,COG1320@2|Bacteria,1Q00A@1224|Proteobacteria,2UCBA@28211|Alphaproteobacteria,3N7G1@45401|Hyphomicrobiaceae 28211|Alphaproteobacteria P Na+/H+ antiporter subunit - - - ko:K05571 - - - - ko00000,ko02000 2.A.63.1,2.A.63.2 - - PhaG_MnhG_YufB HKD3_k127_5330200_8 1123368.AUIS01000004_gene134 1.243e-50 195.0 COG1563@1|root,COG1563@2|Bacteria,1RB3N@1224|Proteobacteria,1S74H@1236|Gammaproteobacteria 1236|Gammaproteobacteria P Domain related to MnhB subunit of Na+/H+ antiporter - - - - - - - - - - - - DUF4040,MnhB HKD3_k127_5330200_11 1278073.MYSTI_06809 2.775e-17 88.0 COG1006@1|root,COG1006@2|Bacteria,1N7TX@1224|Proteobacteria,43388@68525|delta/epsilon subdivisions,2WXIS@28221|Deltaproteobacteria 28221|Deltaproteobacteria P NADH-ubiquinone/plastoquinone oxidoreductase chain 4L - - - ko:K05567 - - - - ko00000,ko02000 2.A.63.1,2.A.63.2 - - Oxidored_q2 HKD3_k127_5330200_4 1123368.AUIS01000004_gene136 6.741e-116 391.0 COG0651@1|root,COG0651@2|Bacteria,1MURB@1224|Proteobacteria,1RYB4@1236|Gammaproteobacteria 1236|Gammaproteobacteria CP Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter MnhD subunit - - - - - - - - - - - - Proton_antipo_M,Proton_antipo_N HKD3_k127_5330200_1 1123368.AUIS01000004_gene137 1.101e-192 636.0 COG0651@1|root,COG0651@2|Bacteria,1QU5Z@1224|Proteobacteria,1T20X@1236|Gammaproteobacteria 1236|Gammaproteobacteria CP PFAM NADH Ubiquinone plastoquinone (complex I) - - - ko:K05568 - - - - ko00000,ko02000 2.A.63.1,2.A.63.2 - - Proton_antipo_M,Proton_antipo_N HKD3_k127_5330200_5 713586.KB900536_gene2691 9.076e-92 324.0 COG0651@1|root,COG0651@2|Bacteria,1N6BY@1224|Proteobacteria,1RR4C@1236|Gammaproteobacteria,1WWFY@135613|Chromatiales 135613|Chromatiales CP PFAM NADH Ubiquinone plastoquinone (complex I) - - - - - - - - - - - - Proton_antipo_M HKD3_k127_5330200_2 452637.Oter_3627 4.87e-166 534.0 COG1055@1|root,COG1055@2|Bacteria,46S61@74201|Verrucomicrobia,3K7MJ@414999|Opitutae 414999|Opitutae P Putative Na+/H+ antiporter - - - - - - - - - - - - Na_H_antiport_3 HKD3_k127_5330200_0 671143.DAMO_2206 5.363e-268 839.0 COG0488@1|root,COG0488@2|Bacteria,2NNP9@2323|unclassified Bacteria 2|Bacteria S ABC transporter uup GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010528,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031323,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0070894,GO:0071944,GO:0080090,GO:0097159,GO:1901363 - ko:K15738 - - - - ko00000,ko02000 3.A.1.120.6 - - ABC_tran,ABC_tran_CTD,ABC_tran_Xtn HKD3_k127_5330200_6 452637.Oter_0578 7.775e-86 295.0 COG0491@1|root,COG0491@2|Bacteria 2|Bacteria GM Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - - - - - - - - - - Lactamase_B HKD3_k127_5330200_7 1267533.KB906736_gene1246 3.946e-63 243.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,3Y2PK@57723|Acidobacteria,2JM7T@204432|Acidobacteriia 204432|Acidobacteriia KLTU Protein kinase domain - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PD40,Pkinase HKD3_k127_5388641_6 391735.Veis_2116 2.422e-80 279.0 COG4952@1|root,COG4952@2|Bacteria,1PSSV@1224|Proteobacteria,2VNT0@28216|Betaproteobacteria,4AGPZ@80864|Comamonadaceae 28216|Betaproteobacteria G isomerase - - 5.3.1.14 ko:K01820 ko00040,ko00051,ko01120,map00040,map00051,map01120 - R01906,R02437,R06589 RC00376,RC00434,RC00516 ko00000,ko00001,ko01000 - - - AP_endonuc_2 HKD3_k127_5388641_0 1382359.JIAL01000001_gene736 7.156e-280 888.0 COG3250@1|root,COG3250@2|Bacteria,3Y3MQ@57723|Acidobacteria,2JKAJ@204432|Acidobacteriia 204432|Acidobacteriia G alpha-L-rhamnosidase - - - - - - - - - - - - Glyco_hydro_106 HKD3_k127_5388641_3 382464.ABSI01000007_gene4164 3.346e-194 615.0 COG1457@1|root,COG1457@2|Bacteria,46TUH@74201|Verrucomicrobia 74201|Verrucomicrobia F Belongs to the purine-cytosine permease (2.A.39) family - - - - - - - - - - - - - HKD3_k127_5388641_4 794903.OPIT5_17300 1.887e-159 508.0 COG0656@1|root,COG0656@2|Bacteria,46XFN@74201|Verrucomicrobia,3K9CQ@414999|Opitutae 414999|Opitutae S Aldo/keto reductase family - - 1.1.1.2 ko:K00002 ko00010,ko00040,ko00561,ko00930,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00040,map00561,map00930,map01100,map01110,map01120,map01130,map01220 M00014 R00746,R01041,R01481,R05231 RC00087,RC00088,RC00099,RC00108 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Aldo_ket_red HKD3_k127_5388641_2 234267.Acid_2859 1.007e-196 617.0 COG1063@1|root,COG1063@2|Bacteria,3Y2H8@57723|Acidobacteria 2|Bacteria E PFAM Alcohol dehydrogenase yphC - 1.1.1.1 ko:K13953 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 - R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310 RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273 ko00000,ko00001,ko01000 - - iECW_1372.ECW_m2771,iWFL_1372.ECW_m2771 ADH_N,ADH_zinc_N HKD3_k127_5388641_5 926550.CLDAP_13620 1.45e-153 496.0 COG1063@1|root,COG1063@2|Bacteria,2G7MF@200795|Chloroflexi 200795|Chloroflexi C PFAM Alcohol dehydrogenase GroES domain protein - - 1.1.1.14 ko:K00008 ko00040,ko00051,ko01100,map00040,map00051,map01100 M00014 R00875,R01896 RC00085,RC00102 ko00000,ko00001,ko00002,ko01000 - - - ADH_N,ADH_N_assoc,ADH_zinc_N HKD3_k127_5388641_1 1122194.AUHU01000003_gene2343 4.592e-232 745.0 COG1554@1|root,COG1554@2|Bacteria,1QBJK@1224|Proteobacteria 1224|Proteobacteria G hydrolase, family 65, central catalytic - - - - - - - - - - - - - HKD3_k127_5388641_7 452637.Oter_1358 7.039e-42 157.0 COG3254@1|root,COG3254@2|Bacteria,46XUW@74201|Verrucomicrobia,3K8BE@414999|Opitutae 414999|Opitutae J Involved in the anomeric conversion of L-rhamnose - - 5.1.3.32 ko:K03534 - - R10819 RC00563 ko00000,ko01000 - - - rhaM HKD3_k127_5388641_8 1304880.JAGB01000002_gene1773 5.147e-11 65.0 COG1874@1|root,COG1874@2|Bacteria,1TQN6@1239|Firmicutes,2488V@186801|Clostridia 186801|Clostridia G beta-galactosidase pbg - 3.2.1.23 ko:K12308 ko00052,map00052 - R01105 RC00452 ko00000,ko00001,ko01000 - - - Glyco_hydro_42,Glyco_hydro_42C,Glyco_hydro_42M HKD3_k127_5404801_1 1047013.AQSP01000140_gene2463 2.469e-46 174.0 COG0438@1|root,COG0438@2|Bacteria,2NQE7@2323|unclassified Bacteria 2|Bacteria M Glycosyl transferases group 1 - - - - - - - - - - - - Glycos_transf_1 HKD3_k127_5404801_0 1047013.AQSP01000140_gene2462 2.856e-90 316.0 COG0438@1|root,COG0438@2|Bacteria,2NQE7@2323|unclassified Bacteria 2|Bacteria M Glycosyl transferases group 1 - - - - - - - - - - - - Glycos_transf_1 HKD3_k127_5404801_2 1047013.AQSP01000140_gene2461 5.776e-21 96.0 COG0438@1|root,COG0438@2|Bacteria,2NQED@2323|unclassified Bacteria 2|Bacteria M Glycosyl transferases group 1 - - - - - - - - - - - - Glyco_trans_1_4,Glycos_transf_1 HKD3_k127_5475943_0 204669.Acid345_3108 1.516e-238 769.0 COG0028@1|root,COG0028@2|Bacteria,3Y3GJ@57723|Acidobacteria,2JI90@204432|Acidobacteriia 204432|Acidobacteriia EH Acetolactate synthase, large subunit - - 2.2.1.6 ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N HKD3_k127_5475943_1 330214.NIDE3406 3.871e-236 746.0 COG0129@1|root,COG0129@2|Bacteria,3J0ES@40117|Nitrospirae 40117|Nitrospirae EG Dehydratase family ilvD - 4.2.1.9 ko:K01687 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R01209,R04441,R05070 RC00468,RC01714 ko00000,ko00001,ko00002,ko01000 - - - ILVD_EDD HKD3_k127_5475943_12 56780.SYN_01299 7.85e-100 338.0 COG0077@1|root,COG1605@1|root,COG0077@2|Bacteria,COG1605@2|Bacteria,1MU60@1224|Proteobacteria,42MGN@68525|delta/epsilon subdivisions,2WJET@28221|Deltaproteobacteria,2MR0Y@213462|Syntrophobacterales 28221|Deltaproteobacteria E Chorismate mutase type II pheA - 4.2.1.51,5.4.99.5 ko:K04518,ko:K14170 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00024,M00025 R00691,R01373,R01715 RC00360,RC03116 ko00000,ko00001,ko00002,ko01000 - - - ACT,CM_2,PDT HKD3_k127_5475943_20 886293.Sinac_5019 4.556e-19 93.0 COG0589@1|root,COG0589@2|Bacteria,2J0XB@203682|Planctomycetes 203682|Planctomycetes T Universal stress protein - - - - - - - - - - - - Usp HKD3_k127_5475943_18 1288963.ADIS_3847 3.583e-68 238.0 COG1434@1|root,COG1434@2|Bacteria,4NI3S@976|Bacteroidetes,47NUZ@768503|Cytophagia 976|Bacteroidetes S DUF218 domain - - - - - - - - - - - - DUF218 HKD3_k127_5475943_7 1210884.HG799469_gene14163 6.715e-139 456.0 COG0666@1|root,COG1520@1|root,COG0666@2|Bacteria,COG1520@2|Bacteria,2J2A4@203682|Planctomycetes 203682|Planctomycetes S beta-propeller repeat - - - - - - - - - - - - PQQ_2,PQQ_3 HKD3_k127_5475943_11 344747.PM8797T_00512 5.14e-104 351.0 COG1520@1|root,COG1520@2|Bacteria,2IXSV@203682|Planctomycetes 203682|Planctomycetes S PQQ-like domain - - - - - - - - - - - - PQQ_2 HKD3_k127_5475943_6 344747.PM8797T_21598 2.382e-154 501.0 COG1520@1|root,COG1520@2|Bacteria,2IXCF@203682|Planctomycetes 203682|Planctomycetes S PQQ-like domain - - - - - - - - - - - - PQQ_2,PQQ_3 HKD3_k127_5475943_15 344747.PM8797T_21408 9.729e-80 296.0 COG1520@1|root,COG1520@2|Bacteria,2IYZY@203682|Planctomycetes 203682|Planctomycetes S protein kinase related protein - - - - - - - - - - - - PQQ_2,PQQ_3 HKD3_k127_5475943_10 314230.DSM3645_13770 1.434e-109 372.0 COG0438@1|root,COG0438@2|Bacteria,2IXZX@203682|Planctomycetes 203682|Planctomycetes M PFAM Glycosyl transferase, group 1 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 HKD3_k127_5475943_17 1123242.JH636434_gene3519 2.535e-71 249.0 COG1136@1|root,COG1136@2|Bacteria,2IZ2X@203682|Planctomycetes 203682|Planctomycetes V Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner - - - ko:K02003,ko:K09810 ko02010,map02010 M00255,M00258 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.125 - - ABC_tran HKD3_k127_5475943_3 1123242.JH636435_gene1557 4.208e-178 606.0 COG0577@1|root,COG4591@1|root,COG0577@2|Bacteria,COG4591@2|Bacteria,2IYHP@203682|Planctomycetes 203682|Planctomycetes V FtsX-like permease family - - - - - - - - - - - - FtsX,MacB_PCD HKD3_k127_5475943_14 1123242.JH636434_gene5302 3.774e-90 314.0 COG1520@1|root,COG1520@2|Bacteria,2IYRB@203682|Planctomycetes 1123242.JH636434_gene5302|- S beta-propeller repeat - - - - - - - - - - - - - HKD3_k127_5475943_13 314230.DSM3645_24005 4.497e-99 337.0 COG1520@1|root,COG1520@2|Bacteria,2IYEA@203682|Planctomycetes 203682|Planctomycetes S PQQ-like domain - - - - - - - - - - - - PQQ_2,PQQ_3 HKD3_k127_5475943_9 314230.DSM3645_20627 2.24e-112 394.0 COG1520@1|root,COG1520@2|Bacteria,2IWR8@203682|Planctomycetes 203682|Planctomycetes S beta-propeller repeat - - - - - - - - - - - - PQQ_2 HKD3_k127_5475943_8 1210884.HG799469_gene14163 3.609e-127 427.0 COG0666@1|root,COG1520@1|root,COG0666@2|Bacteria,COG1520@2|Bacteria,2J2A4@203682|Planctomycetes 203682|Planctomycetes S beta-propeller repeat - - - - - - - - - - - - PQQ_2,PQQ_3 HKD3_k127_5475943_5 1463854.JOHT01000008_gene5798 2.41e-160 523.0 COG3525@1|root,COG3525@2|Bacteria,2H28J@201174|Actinobacteria 201174|Actinobacteria G hydrolase family 20, catalytic - - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - Glyco_hydro_20,Glyco_hydro_20b HKD3_k127_5475943_4 1089553.Tph_c08060 2.141e-161 537.0 COG0493@1|root,COG3383@1|root,COG0493@2|Bacteria,COG3383@2|Bacteria,1TQ1A@1239|Firmicutes,248EK@186801|Clostridia,42EUY@68295|Thermoanaerobacterales 186801|Clostridia C PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - 1.17.1.10,1.17.1.9,1.97.1.9 ko:K00123,ko:K12527,ko:K15022 ko00450,ko00630,ko00680,ko00720,ko01100,ko01120,ko01200,map00450,map00630,map00680,map00720,map01100,map01120,map01200 M00377 R00134,R00519,R07229 RC02420,RC02796 ko00000,ko00001,ko00002,ko01000 - - - Fe_hyd_SSU,Fe_hyd_lg_C,Fer2_4,Fer4,Fer4_20,Fer4_9,Molybdop_Fe4S4,Molybdopterin,Pyr_redox_2,Pyr_redox_3 HKD3_k127_5475943_2 351627.Csac_0620 3.977e-209 698.0 COG1894@1|root,COG1894@2|Bacteria,1TQB0@1239|Firmicutes,2483E@186801|Clostridia,42I0X@68295|Thermoanaerobacterales 186801|Clostridia C NADH-ubiquinone oxidoreductase-F iron-sulfur binding region nuoF2 - 1.12.1.3,1.6.5.3 ko:K00335,ko:K18331 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - 2Fe-2S_thioredx,Complex1_51K,Fer4,Fer4_20,NADH_4Fe-4S,Pyr_redox_2,SLBB HKD3_k127_5475943_16 1168034.FH5T_01555 3.368e-75 272.0 COG0348@1|root,COG0348@2|Bacteria,4NPVD@976|Bacteroidetes,2FTEY@200643|Bacteroidia 976|Bacteroidetes C FMN-binding domain protein - - - - - - - - - - - - Fer4_5 HKD3_k127_5475943_19 595460.RRSWK_06186 1.91e-38 151.0 2DVMZ@1|root,33WFQ@2|Bacteria 2|Bacteria - - - - - ko:K03616 - - - - ko00000 - - - - HKD3_k127_5482520_0 1185876.BN8_04114 3.064e-193 624.0 COG0412@1|root,COG0412@2|Bacteria,4PMKB@976|Bacteroidetes,47Y3P@768503|Cytophagia 976|Bacteroidetes Q Dienelactone hydrolase - - - - - - - - - - - - - HKD3_k127_5482520_1 1225184.ALXE01000068_gene307 6.471e-70 262.0 COG5297@1|root,COG5297@2|Bacteria,1NNDR@1224|Proteobacteria,1RQSB@1236|Gammaproteobacteria 1236|Gammaproteobacteria G Protein of unknown function (DUF1593) - - - - - - - - - - - - DUF1593 HKD3_k127_5486802_0 1121472.AQWN01000002_gene2261 7.205e-153 497.0 COG0519@1|root,COG0519@2|Bacteria,1TPG8@1239|Firmicutes,2487F@186801|Clostridia,26041@186807|Peptococcaceae 186801|Clostridia F Catalyzes the synthesis of GMP from XMP guaA - 6.3.5.2 ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002 - - - GATase,GMP_synt_C,NAD_synthase,tRNA_Me_trans HKD3_k127_5486802_7 1123392.AQWL01000004_gene2698 1.25e-10 74.0 COG1520@1|root,COG1520@2|Bacteria,1MXIJ@1224|Proteobacteria,2VHH5@28216|Betaproteobacteria,1KSC6@119069|Hydrogenophilales 119069|Hydrogenophilales M PQQ-like domain - - - ko:K17713 - - - - ko00000,ko02000 1.B.33.1 - - PQQ_2,PQQ_3 HKD3_k127_5486802_3 404589.Anae109_3408 8.083e-54 218.0 COG5000@1|root,COG5000@2|Bacteria,1MWKZ@1224|Proteobacteria,42MCN@68525|delta/epsilon subdivisions,2WIYA@28221|Deltaproteobacteria,2YUYF@29|Myxococcales 28221|Deltaproteobacteria T Histidine kinase ntrY - 2.7.13.3 ko:K13598 ko02020,map02020 M00498 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HAMP,HATPase_c,HisKA,PAS,PAS_4 HKD3_k127_5486802_2 553385.JEMF01000022_gene3170 1.687e-55 207.0 COG1183@1|root,COG1183@2|Bacteria,1MWD9@1224|Proteobacteria,1RPBB@1236|Gammaproteobacteria,1XIQ5@135619|Oceanospirillales 135619|Oceanospirillales I Belongs to the CDP-alcohol phosphatidyltransferase class-I family pssA - 2.7.8.8 ko:K17103 ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110 M00093 R01800 RC00002,RC00017,RC02795 ko00000,ko00001,ko00002,ko01000 - - - CDP-OH_P_transf HKD3_k127_5486802_1 1380347.JNII01000007_gene549 1.365e-62 221.0 COG0688@1|root,COG0688@2|Bacteria,2GMMF@201174|Actinobacteria,4EWEE@85013|Frankiales 201174|Actinobacteria I Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) psd GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 4.1.1.65 ko:K01613 ko00564,ko01100,ko01110,map00564,map01100,map01110 M00093 R02055 RC00299 ko00000,ko00001,ko00002,ko01000 - - - PS_Dcarbxylase HKD3_k127_5486802_8 234267.Acid_0472 0.0004836 51.0 2ETRB@1|root,33M8W@2|Bacteria,3Y5ZS@57723|Acidobacteria 57723|Acidobacteria S Protein of unknown function (DUF465) - - - - - - - - - - - - DUF465 HKD3_k127_5486802_6 1121472.AQWN01000002_gene2206 8.477e-24 111.0 COG0454@1|root,COG0456@2|Bacteria,1V6KU@1239|Firmicutes,24J9Z@186801|Clostridia,26220@186807|Peptococcaceae 186801|Clostridia K This enzyme acetylates the N-terminal alanine of ribosomal protein S18 rimI - 2.3.1.128 ko:K03789 - - - - ko00000,ko01000,ko03009 - - - Acetyltransf_1,Acetyltransf_10 HKD3_k127_5486802_5 404589.Anae109_3702 4.15e-24 111.0 COG1214@1|root,COG1214@2|Bacteria,1MXPH@1224|Proteobacteria,42RIT@68525|delta/epsilon subdivisions,2WP64@28221|Deltaproteobacteria,2Z1V2@29|Myxococcales 28221|Deltaproteobacteria O Glycoprotease family yeaZ - 2.3.1.234 ko:K01409,ko:K14742 - - R10648 RC00070,RC00416 ko00000,ko01000,ko03016 - - - Peptidase_M22 HKD3_k127_5486802_4 639030.JHVA01000001_gene313 4.955e-35 140.0 COG0249@1|root,COG0249@2|Bacteria,3Y2J5@57723|Acidobacteria,2JHTC@204432|Acidobacteriia 204432|Acidobacteriia L that it carries out the mismatch recognition step. This protein has a weak ATPase activity mutS - - ko:K03555 ko03430,map03430 - - - ko00000,ko00001,ko03400 - - - MutS_I,MutS_II,MutS_III,MutS_IV,MutS_V HKD3_k127_5490803_0 204669.Acid345_0466 0.0 1764.0 COG0508@1|root,COG4770@1|root,COG4799@1|root,COG0508@2|Bacteria,COG4770@2|Bacteria,COG4799@2|Bacteria 2|Bacteria I CoA carboxylase activity - - 2.1.3.1,2.1.3.15,2.3.1.12,3.2.1.1,6.4.1.3 ko:K00627,ko:K01176,ko:K01966,ko:K03646,ko:K17489 ko00010,ko00020,ko00280,ko00500,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko04973,map00010,map00020,map00280,map00500,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map04973 M00307,M00373,M00741 R00209,R00353,R01859,R02108,R02112,R02569,R11262 RC00004,RC00040,RC00097,RC00609,RC02742,RC02857 br01601,ko00000,ko00001,ko00002,ko01000,ko02000 2.C.1.2 GH13 - ACC_central,Alpha-amylase,Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CBM_48,CPSase_L_D2,Carboxyl_trans,DUF349,Gram_pos_anchor,PUD,YSIRK_signal HKD3_k127_5490803_23 379066.GAU_3340 1.964e-26 114.0 COG0454@1|root,COG0456@2|Bacteria 2|Bacteria K acetyltransferase - - - - - - - - - - - - Acetyltransf_1,Acetyltransf_10 HKD3_k127_5490803_26 187272.Mlg_1184 1.428e-15 86.0 2DN81@1|root,32W0Z@2|Bacteria,1MZF2@1224|Proteobacteria,1S9F7@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_5490803_6 1121920.AUAU01000016_gene1288 5.32e-134 434.0 COG1013@1|root,COG1013@2|Bacteria,3Y514@57723|Acidobacteria 57723|Acidobacteria C Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - 1.2.7.11,1.2.7.3 ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C HKD3_k127_5490803_3 1121920.AUAU01000016_gene1289 6.013e-241 762.0 COG0674@1|root,COG1014@1|root,COG0674@2|Bacteria,COG1014@2|Bacteria 2|Bacteria C Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin - - 1.2.7.11,1.2.7.3 ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - PFOR_II,POR,POR_N,Transketolase_C HKD3_k127_5490803_8 1238182.C882_0426 1.154e-128 417.0 COG1940@1|root,COG1940@2|Bacteria,1MU94@1224|Proteobacteria,2TRRU@28211|Alphaproteobacteria,2JQ4F@204441|Rhodospirillales 204441|Rhodospirillales GK ROK family - - 2.7.1.4 ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 - R00760,R00867,R03920 RC00002,RC00017 ko00000,ko00001,ko01000 - - - ROK HKD3_k127_5490803_24 639030.JHVA01000001_gene1715 3.688e-23 107.0 2BYAI@1|root,315Y9@2|Bacteria,3Y52S@57723|Acidobacteria,2JJJK@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - HKD3_k127_5490803_20 335543.Sfum_1596 1.435e-38 154.0 COG0204@1|root,COG0204@2|Bacteria,1MY51@1224|Proteobacteria,42S1J@68525|delta/epsilon subdivisions,2WP2S@28221|Deltaproteobacteria,2MRQY@213462|Syntrophobacterales 28221|Deltaproteobacteria I Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family plsC - 2.3.1.51 ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R02241,R09381 RC00004,RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Acyltransferase HKD3_k127_5490803_13 401526.TcarDRAFT_2301 6.055e-96 321.0 COG0543@1|root,COG0543@2|Bacteria,1TP6D@1239|Firmicutes,4H2FP@909932|Negativicutes 909932|Negativicutes C PFAM oxidoreductase FAD NAD(P)-binding domain protein pyrK_1 - 1.18.1.2,1.19.1.1 ko:K00528 - - R10159 - ko00000,ko01000 - - - DHODB_Fe-S_bind,FAD_binding_6,NAD_binding_1 HKD3_k127_5490803_4 264732.Moth_1517 6.94e-191 610.0 COG0493@1|root,COG0493@2|Bacteria,1TQ1A@1239|Firmicutes,248EK@186801|Clostridia,42EUY@68295|Thermoanaerobacterales 186801|Clostridia C PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase gltA - 1.4.1.13,1.4.1.14 ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 - R00093,R00114,R00248 RC00006,RC00010,RC02799 ko00000,ko00001,ko01000 - - - Fer4_20,Pyr_redox_2 HKD3_k127_5490803_22 1297742.A176_04094 7.234e-33 134.0 COG1678@1|root,COG1678@2|Bacteria,1RCXM@1224|Proteobacteria,42SD7@68525|delta/epsilon subdivisions,2WPI5@28221|Deltaproteobacteria,2YVK5@29|Myxococcales 28221|Deltaproteobacteria K Belongs to the UPF0301 (AlgH) family - - - ko:K07735 - - - - ko00000,ko03000 - - - DUF179 HKD3_k127_5490803_5 861299.J421_4428 1.619e-138 452.0 COG0761@1|root,COG0761@2|Bacteria,1ZTGU@142182|Gemmatimonadetes 142182|Gemmatimonadetes C LytB protein - - 1.17.7.4 ko:K03527 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05884,R08210 RC01137,RC01487 ko00000,ko00001,ko00002,ko01000 - - - LYTB HKD3_k127_5490803_27 1267534.KB906759_gene2025 1.164e-05 54.0 COG3678@1|root,COG3678@2|Bacteria,3Y5A6@57723|Acidobacteria,2JJQD@204432|Acidobacteriia 204432|Acidobacteriia NPTU Heavy-metal resistance - - - - - - - - - - - - Metal_resist HKD3_k127_5490803_17 1047013.AQSP01000118_gene1234 1.017e-66 248.0 COG1538@1|root,COG1538@2|Bacteria,2NP5D@2323|unclassified Bacteria 2|Bacteria MU Outer membrane efflux protein tolC - - ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 1.B.17,2.A.6.2 - - OEP HKD3_k127_5490803_19 1089553.Tph_c02240 4.033e-51 198.0 COG0845@1|root,COG0845@2|Bacteria,1V2JZ@1239|Firmicutes,24A5A@186801|Clostridia,42GMT@68295|Thermoanaerobacterales 186801|Clostridia M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K13888 - M00709 - - ko00000,ko00002,ko02000 8.A.1 - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 HKD3_k127_5490803_2 690850.Desaf_3621 3.316e-284 906.0 COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,42MF6@68525|delta/epsilon subdivisions,2WJ8D@28221|Deltaproteobacteria,2M7S1@213115|Desulfovibrionales 28221|Deltaproteobacteria V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran HKD3_k127_5490803_15 269799.Gmet_3038 5.003e-87 310.0 COG0845@1|root,COG0845@2|Bacteria,1MU8D@1224|Proteobacteria,42NVA@68525|delta/epsilon subdivisions,2WMQK@28221|Deltaproteobacteria,43SP7@69541|Desulfuromonadales 28221|Deltaproteobacteria M Biotin-lipoyl like - - - ko:K02005 - - - - ko00000 - - - HlyD_D23 HKD3_k127_5490803_14 278957.ABEA03000041_gene2086 1.216e-88 301.0 COG1136@1|root,COG1136@2|Bacteria,46SKR@74201|Verrucomicrobia,3K7HB@414999|Opitutae 414999|Opitutae V ABC transporter - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_5490803_9 497964.CfE428DRAFT_5023 4.031e-120 402.0 COG0577@1|root,COG0577@2|Bacteria,46U7K@74201|Verrucomicrobia 74201|Verrucomicrobia V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD HKD3_k127_5490803_12 880073.Calab_1414 9.035e-97 329.0 COG0388@1|root,COG0388@2|Bacteria,2NPKU@2323|unclassified Bacteria 2|Bacteria S Carbon-nitrogen hydrolase - - 3.5.1.53 ko:K12251 ko00330,ko01100,map00330,map01100 - R01152 RC00096 ko00000,ko00001,ko01000 - - - CN_hydrolase HKD3_k127_5490803_21 309801.trd_1324 1.079e-33 137.0 COG0801@1|root,COG0801@2|Bacteria,2G6YT@200795|Chloroflexi,27YCY@189775|Thermomicrobia 189775|Thermomicrobia H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) - - 2.7.6.3 ko:K00950 ko00790,ko01100,map00790,map01100 M00126,M00841 R03503 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - HPPK HKD3_k127_5490803_25 234267.Acid_1164 5.934e-17 85.0 COG1734@1|root,COG1734@2|Bacteria,3Y5PJ@57723|Acidobacteria 57723|Acidobacteria K Prokaryotic dksA/traR C4-type zinc finger - - - ko:K06204 ko02026,map02026 - - - ko00000,ko00001,ko03000,ko03009,ko03021 - - - zf-dskA_traR HKD3_k127_5490803_11 330214.NIDE0351 5.554e-114 402.0 COG3127@1|root,COG3127@2|Bacteria 2|Bacteria Q FtsX-like permease family MA20_43810 - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD HKD3_k127_5490803_16 1382359.JIAL01000001_gene200 1.804e-74 258.0 COG4181@1|root,COG4181@2|Bacteria,3Y3RU@57723|Acidobacteria,2JI42@204432|Acidobacteriia 204432|Acidobacteriia Q ABC transporter - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_5490803_18 1307759.JOMJ01000004_gene2632 3.094e-51 190.0 COG2755@1|root,COG2755@2|Bacteria,1RCXZ@1224|Proteobacteria,42SUC@68525|delta/epsilon subdivisions,2WPR4@28221|Deltaproteobacteria,2MAWJ@213115|Desulfovibrionales 28221|Deltaproteobacteria E PFAM lipolytic protein G-D-S-L family - - 3.1.1.5 ko:K10804 ko01040,map01040 - - - ko00000,ko00001,ko01000,ko01004 - - - Lipase_GDSL_2 HKD3_k127_5490803_7 479434.Sthe_2434 1.662e-133 449.0 COG0166@1|root,COG0176@1|root,COG0166@2|Bacteria,COG0176@2|Bacteria,2G67J@200795|Chloroflexi,27XXA@189775|Thermomicrobia 189775|Thermomicrobia G Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway tal - 2.2.1.2,5.3.1.9 ko:K13810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00004,M00007,M00114 R01827,R02739,R02740,R03321 RC00376,RC00439,RC00563,RC00604 ko00000,ko00001,ko00002,ko01000 - - - PGI,TAL_FSA HKD3_k127_5490803_1 1121920.AUAU01000008_gene1589 0.0 1759.0 COG0674@1|root,COG1013@1|root,COG1014@1|root,COG1149@1|root,COG0674@2|Bacteria,COG1013@2|Bacteria,COG1014@2|Bacteria,COG1149@2|Bacteria,3Y415@57723|Acidobacteria 57723|Acidobacteria C Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin - - 1.2.7.1 ko:K03737 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00173,M00307 R01196,R10866 RC00004,RC02742 br01601,ko00000,ko00001,ko00002,ko01000 - - - EKR,Fer4_16,PFOR_II,POR,POR_N,TPP_enzyme_C HKD3_k127_5490803_10 1121920.AUAU01000008_gene1590 1.614e-119 411.0 COG0167@1|root,COG0167@2|Bacteria,3Y464@57723|Acidobacteria 57723|Acidobacteria F Catalyzes the conversion of dihydroorotate to orotate - - 1.3.98.1 ko:K00226 ko00240,ko01100,map00240,map01100 M00051 R01867 RC00051 ko00000,ko00001,ko00002,ko01000 - - - DHO_dh HKD3_k127_5626070_10 234267.Acid_3693 2.213e-43 169.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,3Y78P@57723|Acidobacteria 57723|Acidobacteria KLTU Protein tyrosine kinase - - - - - - - - - - - - PD40,Pkinase HKD3_k127_5626070_7 234267.Acid_7677 3.337e-56 202.0 COG1595@1|root,COG1595@2|Bacteria,3Y7UW@57723|Acidobacteria 57723|Acidobacteria K ECF sigma factor - - - - - - - - - - - - Sigma70_ECF HKD3_k127_5626070_13 1009370.ALO_06578 1.611e-09 71.0 COG0727@1|root,COG0727@2|Bacteria,1U20W@1239|Firmicutes,4H3W0@909932|Negativicutes 909932|Negativicutes S Putative zinc- or iron-chelating domain - - - ko:K18475 - - - - ko00000,ko01000,ko02035 - - - CxxCxxCC HKD3_k127_5626070_11 266940.Krad_1884 6.261e-25 121.0 COG1597@1|root,COG1597@2|Bacteria,2GK3P@201174|Actinobacteria 201174|Actinobacteria I Diacylglycerol kinase - - 2.7.1.107 ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 - R02240 RC00002,RC00017 ko00000,ko00001,ko01000 - - - DAGK_cat HKD3_k127_5626070_3 1183438.GKIL_2463 5.073e-135 454.0 COG0379@1|root,COG0379@2|Bacteria,1G17Q@1117|Cyanobacteria 1117|Cyanobacteria H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate nadA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 ko:K03517 ko00760,ko01100,map00760,map01100 M00115 R04292 RC01119 ko00000,ko00001,ko00002,ko01000 - - - NadA HKD3_k127_5626070_5 671143.DAMO_2599 2.825e-76 265.0 COG0157@1|root,COG0157@2|Bacteria,2NP3F@2323|unclassified Bacteria 2|Bacteria H Belongs to the NadC ModD family modD - 2.4.2.19 ko:K00767,ko:K03813 ko00760,ko01100,map00760,map01100 M00115 R03348 RC02877 ko00000,ko00001,ko00002,ko01000 - - - QRPTase_C,QRPTase_N HKD3_k127_5626070_0 671143.DAMO_2600 1.478e-225 721.0 COG0029@1|root,COG0029@2|Bacteria,2NNMD@2323|unclassified Bacteria 2|Bacteria H Catalyzes the oxidation of L-aspartate to iminoaspartate nadB GO:0000166,GO:0001716,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008734,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0015922,GO:0016491,GO:0016638,GO:0016641,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044318,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.3.5.4,1.4.3.16 ko:K00244,ko:K00278 ko00020,ko00190,ko00250,ko00620,ko00650,ko00720,ko00760,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00250,map00620,map00650,map00720,map00760,map01100,map01110,map01120,map01130,map01200,map02020 M00009,M00011,M00115,M00150,M00173 R00357,R00481,R02164 RC00006,RC00045,RC02566 ko00000,ko00001,ko00002,ko01000 - - iAF1260.b2574,iBWG_1329.BWG_2338,iECDH10B_1368.ECDH10B_2742,iECDH1ME8569_1439.ECDH1ME8569_2501,iETEC_1333.ETEC_2787,iEcDH1_1363.EcDH1_1094,iJN678.nadB,iJO1366.b2574,iJR904.b2574,iLF82_1304.LF82_1433,iNRG857_1313.NRG857_12785,iSbBS512_1146.nadB,iY75_1357.Y75_RS13445,iYL1228.KPN_02899 FAD_binding_2,Succ_DH_flav_C HKD3_k127_5626070_9 1003200.AXXA_04004 1.974e-48 175.0 COG1917@1|root,COG1917@2|Bacteria,1RGXQ@1224|Proteobacteria,2VSZH@28216|Betaproteobacteria,3T4FT@506|Alcaligenaceae 28216|Betaproteobacteria S Cupin 2, conserved barrel domain protein - - - - - - - - - - - - - HKD3_k127_5626070_8 450851.PHZ_c2574 3.299e-51 207.0 COG2234@1|root,COG2234@2|Bacteria,1MUZ7@1224|Proteobacteria,2TRSJ@28211|Alphaproteobacteria,2KG5D@204458|Caulobacterales 204458|Caulobacterales S PA domain - - - - - - - - - - - - PA,Peptidase_M28 HKD3_k127_5626070_1 234267.Acid_6728 7.901e-177 562.0 COG1914@1|root,COG1914@2|Bacteria,3Y3EU@57723|Acidobacteria 57723|Acidobacteria P PFAM natural resistance-associated macrophage protein - - - - - - - - - - - - Nramp HKD3_k127_5626070_2 1267535.KB906767_gene4077 1.79e-146 476.0 COG2239@1|root,COG2239@2|Bacteria,3Y3WD@57723|Acidobacteria,2JI0X@204432|Acidobacteriia 204432|Acidobacteriia P MgtE intracellular N domain - - - - - - - - - - - - CBS,MgtE_N HKD3_k127_5626070_12 1128421.JAGA01000003_gene2880 5.37e-20 93.0 2ASAK@1|root,31HPU@2|Bacteria,2NQ6K@2323|unclassified Bacteria 2|Bacteria S Prokaryotic Cytochrome C oxidase subunit IV - - 1.9.3.1 ko:K02277 ko00190,ko01100,map00190,map01100 M00155 - - ko00000,ko00001,ko00002,ko01000 3.D.4.4 - - COX4_pro HKD3_k127_5626070_6 1340493.JNIF01000004_gene143 9.434e-73 252.0 COG1845@1|root,COG1845@2|Bacteria,3Y414@57723|Acidobacteria 57723|Acidobacteria C PFAM cytochrome c oxidase, subunit III - - 1.9.3.1 ko:K02276 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.4,3.D.4.6 - - COX3 HKD3_k127_5626070_4 234267.Acid_0498 1.436e-84 282.0 COG0843@1|root,COG0843@2|Bacteria,3Y2X6@57723|Acidobacteria 57723|Acidobacteria C Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B - - 1.9.3.1 ko:K02274 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.2,3.D.4.3,3.D.4.4,3.D.4.6 - - COX1 HKD3_k127_562775_0 1379270.AUXF01000002_gene1507 6.776e-153 492.0 COG1680@1|root,COG1680@2|Bacteria,1ZUDN@142182|Gemmatimonadetes 142182|Gemmatimonadetes V Beta-lactamase - - - - - - - - - - - - Beta-lactamase HKD3_k127_562775_2 378806.STAUR_5253 2.334e-63 244.0 COG0664@1|root,COG3264@1|root,COG0664@2|Bacteria,COG3264@2|Bacteria,1QX62@1224|Proteobacteria,42S57@68525|delta/epsilon subdivisions,2WNY0@28221|Deltaproteobacteria,2YVPP@29|Myxococcales 28221|Deltaproteobacteria MT Mechanosensitive ion channel - - - - - - - - - - - - MS_channel,cNMP_binding HKD3_k127_562775_3 580332.Slit_2046 1.097e-35 151.0 COG4784@1|root,COG4784@2|Bacteria,1QXTD@1224|Proteobacteria,2WHJ6@28216|Betaproteobacteria 28216|Betaproteobacteria S Peptidase family M48 - - - - - - - - - - - - Peptidase_M48 HKD3_k127_562775_1 56780.SYN_01481 9.664e-94 338.0 COG2114@1|root,COG4252@1|root,COG2114@2|Bacteria,COG4252@2|Bacteria,1MV1V@1224|Proteobacteria,42N5S@68525|delta/epsilon subdivisions,2WIUS@28221|Deltaproteobacteria,2MQZ2@213462|Syntrophobacterales 28221|Deltaproteobacteria T Adenylyl cyclase class-3 4 guanylyl cyclase - - 4.6.1.1 ko:K01768 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000 - - - CHASE2,Guanylate_cyc HKD3_k127_562775_4 34007.IT40_01995 1.045e-33 135.0 COG2423@1|root,COG2423@2|Bacteria,1N3EI@1224|Proteobacteria,2TT7X@28211|Alphaproteobacteria,2PW7Z@265|Paracoccus 28211|Alphaproteobacteria E Ornithine cyclodeaminase/mu-crystallin family eutC - 4.3.1.12 ko:K01750 ko00330,ko01110,ko01130,ko01230,map00330,map01110,map01130,map01230 - R00671 RC00354 ko00000,ko00001,ko01000 - - - OCD_Mu_crystall HKD3_k127_5630780_5 1469607.KK073768_gene3530 1.572e-57 201.0 COG0458@1|root,COG0458@2|Bacteria,1G00J@1117|Cyanobacteria,1HJHR@1161|Nostocales 1117|Cyanobacteria F PFAM Carbamoyl-phosphate synthase L chain, ATP binding domain carB GO:0000050,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.5.5 ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - - CPSase_L_D2,CPSase_L_D3,MGS HKD3_k127_5630780_2 321332.CYB_1236 1.796e-125 420.0 COG0505@1|root,COG0505@2|Bacteria,1G19V@1117|Cyanobacteria,1GYPV@1129|Synechococcus 1117|Cyanobacteria F Carbamoyl-phosphate synthetase glutamine chain carA GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - - CPSase_sm_chain,GATase HKD3_k127_5630780_8 593750.Metfor_1452 8.7e-06 59.0 arCOG03264@1|root,arCOG03264@2157|Archaea 2157|Archaea - - - - - - - - - - - - - - PEGA HKD3_k127_5630780_7 929712.KI912613_gene1213 2.215e-21 111.0 COG0515@1|root,COG0515@2|Bacteria,2HMAN@201174|Actinobacteria 201174|Actinobacteria KLT Serine threonine protein kinase - - - - - - - - - - - - Pkinase HKD3_k127_5630780_3 1089550.ATTH01000001_gene2287 9.374e-84 299.0 COG4365@1|root,COG4365@2|Bacteria,4NGCF@976|Bacteroidetes,1FJ16@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes S Bacillithiol biosynthesis BshC bshC - - ko:K22136 - - - - ko00000 - - - BshC HKD3_k127_5630780_0 204669.Acid345_1065 1.293e-145 501.0 COG0744@1|root,COG0744@2|Bacteria,3Y42I@57723|Acidobacteria,2JI7Q@204432|Acidobacteriia 204432|Acidobacteriia M Transglycosylase - - 2.4.1.129,3.4.16.4 ko:K05365 ko00550,map00550 - R04519 RC00005,RC00049 ko00000,ko00001,ko01000,ko01003,ko01011 - GT51 - Transgly,Transpeptidase HKD3_k127_5630780_4 204669.Acid345_2647 3.329e-58 212.0 COG1975@1|root,COG1975@2|Bacteria,3Y54Y@57723|Acidobacteria,2JP44@204432|Acidobacteriia 204432|Acidobacteriia C XdhC and CoxI family - - - ko:K07402 - - - - ko00000 - - - XdhC_C,XdhC_CoxI HKD3_k127_5630780_1 1280390.CBQR020000102_gene2505 2.852e-133 437.0 COG0402@1|root,COG0402@2|Bacteria,1TP43@1239|Firmicutes,4HBV3@91061|Bacilli,26RWE@186822|Paenibacillaceae 91061|Bacilli F Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine mtaD - - - - - - - - - - - Amidohydro_1 HKD3_k127_5630780_6 1297742.A176_01841 9.652e-35 139.0 COG1420@1|root,COG1420@2|Bacteria,1MVX4@1224|Proteobacteria,42MTI@68525|delta/epsilon subdivisions,2WIXW@28221|Deltaproteobacteria,2YUQ9@29|Myxococcales 28221|Deltaproteobacteria K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons hrcA - - ko:K03705 - - - - ko00000,ko03000 - - - HrcA,HrcA_DNA-bdg HKD3_k127_5650249_1 861299.J421_0969 6.255e-60 209.0 COG3119@1|root,COG3119@2|Bacteria,1ZUXF@142182|Gemmatimonadetes 142182|Gemmatimonadetes P Domain of unknown function (DUF4976) - - - - - - - - - - - - DUF4976,Sulfatase HKD3_k127_5650249_0 1123392.AQWL01000004_gene2665 1.603e-217 685.0 COG0046@1|root,COG0047@1|root,COG0046@2|Bacteria,COG0047@2|Bacteria,1MYN4@1224|Proteobacteria,2VHTE@28216|Betaproteobacteria,1KSEI@119069|Hydrogenophilales 119069|Hydrogenophilales F CobB/CobQ-like glutamine amidotransferase domain - - 6.3.5.3 ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04463 RC00010,RC01160 ko00000,ko00001,ko00002,ko01000 - - - AIRS_C,GATase_5 HKD3_k127_5655112_7 861299.J421_0095 1.482e-09 61.0 COG1739@1|root,COG1739@2|Bacteria,1ZTND@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Domain of unknown function (DUF1949) - - - - - - - - - - - - DUF1949,UPF0029 HKD3_k127_5655112_5 204669.Acid345_0264 4.361e-24 103.0 COG0789@1|root,COG0789@2|Bacteria,3Y7ZC@57723|Acidobacteria 57723|Acidobacteria K MerR, DNA binding - - - - - - - - - - - - MerR_1 HKD3_k127_5655112_4 522772.Dacet_1597 5.68e-37 159.0 COG1618@1|root,COG1618@2|Bacteria 2|Bacteria F nucleotide phosphatase activity, acting on free nucleotides mobA - 2.7.4.9,2.7.7.77,3.6.1.15,3.6.1.55,3.6.3.29,3.6.3.34 ko:K00943,ko:K02013,ko:K02017,ko:K03574,ko:K03752,ko:K06928 ko00230,ko00240,ko00730,ko00790,ko01100,ko02010,map00230,map00240,map00730,map00790,map01100,map02010 M00053,M00189,M00240 R00086,R00615,R02094,R02098,R11581 RC00002 ko00000,ko00001,ko00002,ko01000,ko02000,ko03400 3.A.1.14,3.A.1.8 - - DUF2478,NTPase_1 HKD3_k127_5655112_3 156889.Mmc1_2110 2.472e-49 198.0 COG1453@1|root,COG1453@2|Bacteria,1RAU3@1224|Proteobacteria 1224|Proteobacteria S PFAM aldo keto reductase - - - ko:K07079 - - - - ko00000 - - - Aldo_ket_red HKD3_k127_5655112_0 1121104.AQXH01000001_gene1902 1.807e-130 451.0 COG2866@1|root,COG2866@2|Bacteria,4NH4I@976|Bacteroidetes 976|Bacteroidetes E Peptidase M14 - - - - - - - - - - - - Peptidase_M14 HKD3_k127_5655112_2 929703.KE386491_gene756 2.166e-66 256.0 COG2866@1|root,COG2866@2|Bacteria,4NHBS@976|Bacteroidetes,47MR4@768503|Cytophagia 976|Bacteroidetes E Zinc carboxypeptidase - - - - - - - - - - - - Peptidase_M14 HKD3_k127_5655112_1 1047013.AQSP01000097_gene1961 6.797e-71 246.0 COG4122@1|root,COG4122@2|Bacteria,2NPV6@2323|unclassified Bacteria 2|Bacteria S Methyltransferase domain mdmC - - - - - - - - - - - Methyltransf_24,Methyltransf_3 HKD3_k127_5676127_12 443143.GM18_0593 4.602e-07 63.0 COG4733@1|root,COG4932@1|root,COG4733@2|Bacteria,COG4932@2|Bacteria,1RHT8@1224|Proteobacteria,430B7@68525|delta/epsilon subdivisions,2WVNE@28221|Deltaproteobacteria 28221|Deltaproteobacteria M Fibronectin type 3 domain - - - ko:K20276 ko02024,map02024 - - - ko00000,ko00001 - - - - HKD3_k127_5676127_5 1254432.SCE1572_14995 1.319e-128 420.0 COG0722@1|root,COG0722@2|Bacteria,1MU5Q@1224|Proteobacteria,42PQY@68525|delta/epsilon subdivisions,2WJXE@28221|Deltaproteobacteria,2YUH0@29|Myxococcales 28221|Deltaproteobacteria E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) aroF - 2.5.1.54 ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 M00022 R01826 RC00435 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_2375 DAHP_synth_1 HKD3_k127_5676127_6 765912.Thimo_1793 6.675e-110 363.0 COG1230@1|root,COG1230@2|Bacteria,1MVQB@1224|Proteobacteria,1RMR8@1236|Gammaproteobacteria,1WWFG@135613|Chromatiales 135613|Chromatiales P TIGRFAM cation diffusion facilitator family transporter - - - ko:K16264 - - - - ko00000,ko02000 2.A.4.1 - - Cation_efflux HKD3_k127_5676127_3 234267.Acid_5293 3.72e-141 479.0 COG1680@1|root,COG1680@2|Bacteria 2|Bacteria V peptidase activity - - - - - - - - - - - - Beta-lactamase HKD3_k127_5676127_2 234267.Acid_0092 7.52e-166 540.0 COG2272@1|root,COG2272@2|Bacteria,3Y2GS@57723|Acidobacteria 57723|Acidobacteria I Belongs to the type-B carboxylesterase lipase family - - - ko:K03929 - - - - ko00000,ko01000 - CE10 - COesterase HKD3_k127_5676127_0 660470.Theba_2126 1.006e-211 681.0 COG0405@1|root,COG0405@2|Bacteria,2GCYN@200918|Thermotogae 200918|Thermotogae M PFAM Gamma-glutamyltranspeptidase - - 2.3.2.2,3.4.19.13 ko:K00681 ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100 - R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935 RC00064,RC00090,RC00096 ko00000,ko00001,ko01000,ko01002 - - - G_glu_transpept HKD3_k127_5676127_11 1235835.C814_01874 1.499e-44 168.0 28NEN@1|root,2ZBH5@2|Bacteria,1VH0Z@1239|Firmicutes,24IXB@186801|Clostridia 186801|Clostridia - - - - - - - - - - - - - - - HKD3_k127_5676127_7 1230342.CTM_09951 1.915e-94 327.0 COG4666@1|root,COG4666@2|Bacteria,1VRFB@1239|Firmicutes,24BX2@186801|Clostridia,36QP7@31979|Clostridiaceae 186801|Clostridia S Tripartite ATP-independent periplasmic transporter, DctM component - - - - - - - - - - - - DctM HKD3_k127_5676127_4 1410653.JHVC01000002_gene4496 4.233e-132 430.0 COG3608@1|root,COG3608@2|Bacteria,1UFCN@1239|Firmicutes,24EAK@186801|Clostridia,36QK4@31979|Clostridiaceae 186801|Clostridia S Succinylglutamate desuccinylase / Aspartoacylase family - - - - - - - - - - - - AstE_AspA HKD3_k127_5676127_1 1210884.HG799464_gene10774 1.338e-175 586.0 COG1228@1|root,COG1228@2|Bacteria,2IYFS@203682|Planctomycetes 203682|Planctomycetes Q COG1228 Imidazolonepropionase and related - - 3.5.1.25 ko:K01443 ko00520,ko01130,map00520,map01130 - R02059 RC00166,RC00300 ko00000,ko00001,ko01000 - - - Amidohydro_1 HKD3_k127_5676127_10 1210884.HG799464_gene10774 6.608e-59 223.0 COG1228@1|root,COG1228@2|Bacteria,2IYFS@203682|Planctomycetes 203682|Planctomycetes Q COG1228 Imidazolonepropionase and related - - 3.5.1.25 ko:K01443 ko00520,ko01130,map00520,map01130 - R02059 RC00166,RC00300 ko00000,ko00001,ko01000 - - - Amidohydro_1 HKD3_k127_5676127_8 644282.Deba_1127 2.708e-89 330.0 COG1629@1|root,COG4771@2|Bacteria,1MWKN@1224|Proteobacteria,42MNM@68525|delta/epsilon subdivisions,2WMEW@28221|Deltaproteobacteria 28221|Deltaproteobacteria P COGs COG1629 Outer membrane receptor protein mostly Fe transport - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - Plug,TonB_dep_Rec HKD3_k127_5676127_9 595460.RRSWK_06183 2.639e-65 248.0 COG1520@1|root,COG1520@2|Bacteria 2|Bacteria S amino acid activation for nonribosomal peptide biosynthetic process - - - - - - - - - - - - PQQ_2 HKD3_k127_570232_0 1047013.AQSP01000094_gene29 4.329e-104 353.0 COG1058@1|root,COG1546@1|root,COG1058@2|Bacteria,COG1546@2|Bacteria,2NP0G@2323|unclassified Bacteria 2|Bacteria S Belongs to the CinA family cinA GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 ko:K03742,ko:K03743 ko00760,map00760 - R02322 RC00100 ko00000,ko00001,ko01000 - - - CinA,MoCF_biosynth HKD3_k127_570232_1 517417.Cpar_1697 1.424e-27 119.0 COG1267@1|root,COG1267@2|Bacteria,1FE6P@1090|Chlorobi 1090|Chlorobi I PFAM phosphatidylglycerophosphatase A - - 3.1.3.27 ko:K01095 ko00564,ko01100,map00564,map01100 - R02029 RC00017 ko00000,ko00001,ko01000 - - - PgpA HKD3_k127_570232_2 338963.Pcar_3078 1.191e-07 63.0 COG1714@1|root,COG1714@2|Bacteria,1NHVN@1224|Proteobacteria,42XXU@68525|delta/epsilon subdivisions,2WT22@28221|Deltaproteobacteria,43SSP@69541|Desulfuromonadales 28221|Deltaproteobacteria S RDD family - - - - - - - - - - - - RDD HKD3_k127_5717726_2 653045.Strvi_3737 3.354e-09 63.0 COG4225@1|root,COG4225@2|Bacteria,2I8PZ@201174|Actinobacteria 201174|Actinobacteria G Glycosyl Hydrolase Family 88 - - 3.2.1.172 ko:K15532 - - - - ko00000,ko01000 - GH105 - Glyco_hydro_88 HKD3_k127_5717726_0 1340493.JNIF01000003_gene4144 5.791e-310 990.0 COG1629@1|root,COG4771@2|Bacteria,3Y3KA@57723|Acidobacteria 57723|Acidobacteria P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg HKD3_k127_5717726_1 1040989.AWZU01000030_gene855 7.225e-113 368.0 COG4952@1|root,COG4952@2|Bacteria,1PSSV@1224|Proteobacteria,2TSCI@28211|Alphaproteobacteria,3JWBH@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria M isomerase rhaI - 5.3.1.14 ko:K01820 ko00040,ko00051,ko01120,map00040,map00051,map01120 - R01906,R02437,R06589 RC00376,RC00434,RC00516 ko00000,ko00001,ko01000 - - - AP_endonuc_2 HKD3_k127_5746781_7 1379270.AUXF01000003_gene3810 2.617e-38 144.0 COG0605@1|root,COG0605@2|Bacteria,1ZT7S@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Destroys radicals which are normally produced within the cells and which are toxic to biological systems - - 1.15.1.1 ko:K04564 ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016 - - - ko00000,ko00001,ko01000 - - - Sod_Fe_C,Sod_Fe_N HKD3_k127_5746781_2 502025.Hoch_5710 1.146e-132 445.0 COG0490@1|root,COG1226@1|root,COG4651@1|root,COG0490@2|Bacteria,COG1226@2|Bacteria,COG4651@2|Bacteria,1MV34@1224|Proteobacteria,42MEM@68525|delta/epsilon subdivisions,2WK23@28221|Deltaproteobacteria,2YX01@29|Myxococcales 28221|Deltaproteobacteria P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family - - - ko:K03455,ko:K11747 - - - - ko00000,ko02000 2.A.37,2.A.37.1.2 - - Na_H_Exchanger,TrkA_C,TrkA_N HKD3_k127_5746781_3 497964.CfE428DRAFT_1241 4.048e-100 347.0 COG0318@1|root,COG0318@2|Bacteria 2|Bacteria IQ PFAM AMP-dependent synthetase and ligase - - - - - - - - - - - - GH3 HKD3_k127_5746781_6 1173022.Cri9333_2221 5.274e-39 155.0 2DBEV@1|root,2Z8UT@2|Bacteria,1G3XJ@1117|Cyanobacteria,1HA4M@1150|Oscillatoriales 1117|Cyanobacteria - - - - - - - - - - - - - - - HKD3_k127_5746781_5 1499967.BAYZ01000095_gene4140 6.527e-45 177.0 28K6C@1|root,2Z9UT@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - Acetyltransf_1 HKD3_k127_5746781_1 1499967.BAYZ01000095_gene4141 6.686e-140 456.0 COG1032@1|root,COG1032@2|Bacteria,2NQU0@2323|unclassified Bacteria 2|Bacteria C Elongator protein 3, MiaB family, Radical SAM - - - - - - - - - - - - B12-binding,DUF4070,Radical_SAM HKD3_k127_5746781_0 1499967.BAYZ01000095_gene4143 1.093e-162 523.0 COG1032@1|root,COG1032@2|Bacteria,2NQU0@2323|unclassified Bacteria 2|Bacteria C Elongator protein 3, MiaB family, Radical SAM - - - - - - - - - - - - B12-binding,DUF4070,Radical_SAM HKD3_k127_5746781_8 889378.Spiaf_0442 2.287e-19 104.0 COG1487@1|root,COG1487@2|Bacteria 2|Bacteria S nuclease activity vapC GO:0001666,GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016787,GO:0016788,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0034641,GO:0036293,GO:0040008,GO:0043170,GO:0043207,GO:0044237,GO:0044238,GO:0044403,GO:0044419,GO:0045926,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051701,GO:0051704,GO:0051707,GO:0060255,GO:0065007,GO:0070482,GO:0071704,GO:0075136,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:2000112,GO:2000113 - - - - - - - - - - PIN HKD3_k127_5746781_4 760192.Halhy_2059 2.065e-63 223.0 COG4447@1|root,COG4447@2|Bacteria,4NESU@976|Bacteroidetes,1IW7V@117747|Sphingobacteriia 976|Bacteroidetes S Sortilin, neurotensin receptor 3, - - - - - - - - - - - - Sortilin-Vps10 HKD3_k127_575949_1 234267.Acid_4393 1.92e-100 336.0 COG0515@1|root,COG0515@2|Bacteria 234267.Acid_4393|- KLT protein kinase activity - - - - - - - - - - - - - HKD3_k127_575949_2 1122185.N792_01200 2.923e-86 302.0 COG0531@1|root,COG0531@2|Bacteria,1MUA2@1224|Proteobacteria,1RQ1P@1236|Gammaproteobacteria,1X5A0@135614|Xanthomonadales 135614|Xanthomonadales E amino acid - - - - - - - - - - - - AA_permease_2 HKD3_k127_575949_0 861299.J421_1935 2.165e-267 845.0 COG2091@1|root,COG2091@2|Bacteria,1ZU9H@142182|Gemmatimonadetes 142182|Gemmatimonadetes H lysine biosynthetic process via aminoadipic acid - - - - - - - - - - - - - HKD3_k127_575949_4 56110.Oscil6304_2112 1.919e-62 225.0 COG1656@1|root,COG1656@2|Bacteria,1G344@1117|Cyanobacteria,1HAHV@1150|Oscillatoriales 1117|Cyanobacteria S Mut7-C ubiquitin - - - ko:K09122 - - - - ko00000 - - - Mut7-C,Ub-Mut7C HKD3_k127_575949_6 638303.Thal_0640 2.355e-48 185.0 COG1173@1|root,COG1173@2|Bacteria,2G3I0@200783|Aquificae 200783|Aquificae P PFAM binding-protein-dependent transport systems inner membrane component - - - ko:K02034 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - BPD_transp_1,OppC_N HKD3_k127_575949_5 321327.CYA_2362 5.902e-50 192.0 COG0601@1|root,COG0601@2|Bacteria,1G23K@1117|Cyanobacteria,1H47A@1129|Synechococcus 1117|Cyanobacteria P ABC-type dipeptide oligopeptide nickel transport - - 2.4.2.7 ko:K00759,ko:K02033 ko00230,ko01100,ko02024,map00230,map01100,map02024 M00239 R00190,R01229,R04378 RC00063 ko00000,ko00001,ko00002,ko01000,ko02000,ko04147 3.A.1.5 - - BPD_transp_1 HKD3_k127_575949_7 1254432.SCE1572_21780 8.152e-37 158.0 COG0784@1|root,COG4191@1|root,COG0784@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,42M1R@68525|delta/epsilon subdivisions,2WK3J@28221|Deltaproteobacteria,2YUC3@29|Myxococcales 28221|Deltaproteobacteria T signal transduction histidine kinase - - - - - - - - - - - - HATPase_c,HisKA,PAS_4,PAS_8,Response_reg HKD3_k127_575949_3 1487953.JMKF01000052_gene1657 1.538e-65 231.0 COG1253@1|root,COG1253@2|Bacteria,1G16U@1117|Cyanobacteria,1H75A@1150|Oscillatoriales 1117|Cyanobacteria S PFAM CBS domain - - - ko:K03699 - - - - ko00000,ko02042 - - - CBS,CorC_HlyC,DUF21 HKD3_k127_5761235_4 1267535.KB906767_gene3018 2.581e-16 79.0 COG0776@1|root,COG0776@2|Bacteria,3Y5E1@57723|Acidobacteria,2JJN0@204432|Acidobacteriia 204432|Acidobacteriia L Bacterial DNA-binding protein - - - ko:K03530 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding HKD3_k127_5761235_2 502025.Hoch_4278 1.337e-47 196.0 COG0642@1|root,COG2205@2|Bacteria 502025.Hoch_4278|- T PhoQ Sensor - - - - - - - - - - - - - HKD3_k127_5761235_3 882.DVU_2084 4.651e-27 127.0 COG0747@1|root,COG0747@2|Bacteria,1MUZH@1224|Proteobacteria,42MFK@68525|delta/epsilon subdivisions,2WKBU@28221|Deltaproteobacteria,2M7XJ@213115|Desulfovibrionales 28221|Deltaproteobacteria E extracellular solute-binding protein, family 5 - - - ko:K02035,ko:K13893 ko02010,ko02024,map02010,map02024 M00239,M00349 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.21,3.A.1.5.24 - - SBP_bac_5 HKD3_k127_5761235_1 243231.GSU1446 4.048e-54 208.0 COG0641@1|root,COG0641@2|Bacteria,1R7G1@1224|Proteobacteria,42PI5@68525|delta/epsilon subdivisions,2WIK2@28221|Deltaproteobacteria,43T2A@69541|Desulfuromonadales 28221|Deltaproteobacteria C PFAM Radical SAM domain protein - - - ko:K06871 - - - - ko00000 - - - Fer4_12,Radical_SAM HKD3_k127_5761235_0 667014.Thein_1806 5.885e-101 340.0 COG2204@1|root,COG2204@2|Bacteria,2GHIR@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria T Bacterial regulatory protein, Fis family - - - - - - - - - - - - HTH_8,Response_reg,Sigma54_activat HKD3_k127_5787215_5 204669.Acid345_1164 3.611e-86 290.0 COG2057@1|root,COG2057@2|Bacteria,3Y3EC@57723|Acidobacteria,2JIV4@204432|Acidobacteriia 204432|Acidobacteriia I Coenzyme A transferase - - 2.8.3.5 ko:K01029 ko00072,ko00280,ko00650,map00072,map00280,map00650 - R00410 RC00014 ko00000,ko00001,ko01000 - - - CoA_trans HKD3_k127_5787215_4 1111479.AXAR01000003_gene1517 1.334e-93 313.0 COG1788@1|root,COG1788@2|Bacteria,1V21Q@1239|Firmicutes,4HB3E@91061|Bacilli,279JQ@186823|Alicyclobacillaceae 91061|Bacilli I Coenzyme A transferase scoA - 2.8.3.5 ko:K01028 ko00072,ko00280,ko00650,map00072,map00280,map00650 - R00410 RC00014 ko00000,ko00001,ko01000 - - - CoA_trans HKD3_k127_5787215_10 110663.KI911558_gene2378 0.0002709 53.0 COG0287@1|root,COG0287@2|Bacteria,1G0P0@1117|Cyanobacteria,1GYSP@1129|Synechococcus 1117|Cyanobacteria C Prephenate dehydrogenase tyrA - 1.3.1.78 ko:K15226 ko00400,ko01100,ko01110,ko01230,map00400,map01100,map01110,map01230 M00040 R00733 RC00125 ko00000,ko00001,ko00002,ko01000 - - - PDH HKD3_k127_5787215_1 234267.Acid_7885 6.555e-144 464.0 COG2876@1|root,COG2876@2|Bacteria,3Y2SV@57723|Acidobacteria 57723|Acidobacteria E NeuB family - - 2.5.1.54 ko:K03856 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R01826 RC00435 ko00000,ko00001,ko00002,ko01000 - - - DAHP_synth_1 HKD3_k127_5787215_7 234267.Acid_7887 6.884e-62 241.0 COG0159@1|root,COG0159@2|Bacteria,3Y3X2@57723|Acidobacteria 57723|Acidobacteria E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate trpA - 4.2.1.20 ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722 RC00209,RC00210,RC00700,RC00701,RC02868 ko00000,ko00001,ko00002,ko01000 - - - Trp_syntA HKD3_k127_5787215_0 478741.JAFS01000002_gene375 3.538e-156 514.0 COG0133@1|root,COG0133@2|Bacteria,46SHR@74201|Verrucomicrobia,37G1U@326457|unclassified Verrucomicrobia 74201|Verrucomicrobia E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine trpB - 4.2.1.20 ko:K01696 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722 RC00209,RC00210,RC00700,RC00701,RC02868 ko00000,ko00001,ko00002,ko01000 - - - PALP HKD3_k127_5787215_9 1125863.JAFN01000001_gene2403 6.979e-50 197.0 COG0135@1|root,COG0135@2|Bacteria,1RA87@1224|Proteobacteria,42QQ3@68525|delta/epsilon subdivisions,2WNPH@28221|Deltaproteobacteria 28221|Deltaproteobacteria E Belongs to the TrpF family trpF - 5.3.1.24 ko:K01817 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R03509 RC00945 ko00000,ko00001,ko00002,ko01000 - - - PRAI HKD3_k127_5787215_8 1463934.JOCF01000018_gene3976 1.405e-52 207.0 COG0134@1|root,COG0134@2|Bacteria,2GIVV@201174|Actinobacteria 201174|Actinobacteria E Belongs to the TrpC family trpC GO:0000162,GO:0000287,GO:0003674,GO:0003824,GO:0004425,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016020,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0042401,GO:0042430,GO:0042435,GO:0043167,GO:0043169,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046219,GO:0046391,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0071944,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.48 ko:K01609 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R03508 RC00944 ko00000,ko00001,ko00002,ko01000 - - - IGPS HKD3_k127_5787215_3 264732.Moth_1340 2.537e-94 321.0 COG0547@1|root,COG0547@2|Bacteria,1TP8U@1239|Firmicutes,247WY@186801|Clostridia,42EK5@68295|Thermoanaerobacterales 186801|Clostridia F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) trpD - 2.4.2.18,4.1.3.27 ko:K00766,ko:K13497 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R00985,R00986,R01073 RC00010,RC00440,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 - - - Glycos_trans_3N,Glycos_transf_3 HKD3_k127_5787215_6 240015.ACP_2879 1.34e-65 241.0 COG0512@1|root,COG0512@2|Bacteria,3Y36D@57723|Acidobacteria,2JHQS@204432|Acidobacteriia 204432|Acidobacteriia EH Peptidase C26 - - 4.1.3.27 ko:K01658 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 M00023 R00985,R00986 RC00010,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 - - - GATase HKD3_k127_5787215_2 309801.trd_0102 3.31e-105 346.0 COG0147@1|root,COG0147@2|Bacteria,2G5M7@200795|Chloroflexi,27XZ8@189775|Thermomicrobia 189775|Thermomicrobia H Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia trpE - 4.1.3.27 ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 M00023 R00985,R00986 RC00010,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 - - - Anth_synt_I_N,Chorismate_bind HKD3_k127_5805650_0 234267.Acid_1201 2.477e-205 648.0 COG3591@1|root,COG3591@2|Bacteria,3Y2TU@57723|Acidobacteria 57723|Acidobacteria E Peptidase S46 - - - - - - - - - - - - Peptidase_S46 HKD3_k127_5805650_3 383407.XOC_2137 5.917e-10 66.0 COG0586@1|root,COG0607@1|root,COG0586@2|Bacteria,COG0607@2|Bacteria,1R6F1@1224|Proteobacteria,1S4IC@1236|Gammaproteobacteria,1X62F@135614|Xanthomonadales 135614|Xanthomonadales P Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide - - - - - - - - - - - - Rhodanese,SNARE_assoc HKD3_k127_5805650_2 204669.Acid345_1574 1.045e-24 114.0 COG2834@1|root,COG2834@2|Bacteria,3Y4XE@57723|Acidobacteria,2JJK4@204432|Acidobacteriia 204432|Acidobacteriia M outer membrane lipoprotein carrier protein LolA - - - ko:K03634 - - - - ko00000 - - - LolA HKD3_k127_5805650_1 1047013.AQSP01000036_gene1385 1.113e-61 234.0 COG4796@1|root,COG4796@2|Bacteria 2|Bacteria U Type ii and iii secretion system protein pulQ - - ko:K02453 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - Cohesin,STN,Secretin,Secretin_N HKD3_k127_59362_3 309799.DICTH_1837 1.305e-06 57.0 COG3134@1|root,COG3134@2|Bacteria 2|Bacteria I Outer membrane lipoprotein - - - - - - - - - - - - Crystall HKD3_k127_59362_1 118173.KB235914_gene3422 9.825e-49 177.0 COG1487@1|root,COG1487@2|Bacteria,1G66B@1117|Cyanobacteria,1HBVV@1150|Oscillatoriales 1117|Cyanobacteria S PIN domain - - - - - - - - - - - - PIN HKD3_k127_59362_4 1500301.JQMF01000014_gene4646 3.825e-05 57.0 COG2002@1|root,COG2002@2|Bacteria,1NAMP@1224|Proteobacteria,2UIV2@28211|Alphaproteobacteria,4BG8F@82115|Rhizobiaceae 28211|Alphaproteobacteria K SpoVT / AbrB like domain - - - - - - - - - - - - MazE_antitoxin,PrlF_antitoxin HKD3_k127_59362_2 1386089.N865_05350 2.628e-10 73.0 COG4733@1|root,COG4733@2|Bacteria,2I7XV@201174|Actinobacteria,4FK2V@85021|Intrasporangiaceae 201174|Actinobacteria M Fibronectin type III domain - - - - - - - - - - - - fn3 HKD3_k127_59362_0 694427.Palpr_2031 1.257e-90 319.0 COG0726@1|root,COG0726@2|Bacteria,4PHZE@976|Bacteroidetes,2G204@200643|Bacteroidia,2311I@171551|Porphyromonadaceae 976|Bacteroidetes G Polysaccharide deacetylase - - - - - - - - - - - - Polysacc_deac_1 HKD3_k127_5941167_1 1191523.MROS_0721 2.118e-78 273.0 COG1932@1|root,COG1932@2|Bacteria 2|Bacteria E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine serC GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 M00020,M00124 R04173,R05085 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_5 HKD3_k127_5941167_0 234267.Acid_3960 5.167e-128 419.0 COG0111@1|root,COG0111@2|Bacteria,3Y7TQ@57723|Acidobacteria 57723|Acidobacteria EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding - - 1.1.1.399,1.1.1.95 ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R01513 RC00031 ko00000,ko00001,ko00002,ko01000,ko04147 - - - 2-Hacid_dh,2-Hacid_dh_C HKD3_k127_6007049_2 880072.Desac_1408 9.088e-68 246.0 COG0402@1|root,COG0402@2|Bacteria,1MVPA@1224|Proteobacteria,42MJ7@68525|delta/epsilon subdivisions,2WIRS@28221|Deltaproteobacteria,2MRK6@213462|Syntrophobacterales 28221|Deltaproteobacteria F Amidohydrolase family - - 3.5.4.40 ko:K20810 ko00130,ko01110,map00130,map01110 - R10695 RC00477 ko00000,ko00001,ko01000 - - - Amidohydro_1 HKD3_k127_6007049_0 103733.JNYO01000021_gene6810 9.251e-149 489.0 COG0044@1|root,COG0044@2|Bacteria,2GK4A@201174|Actinobacteria,4DXP0@85010|Pseudonocardiales 201174|Actinobacteria F Amidohydrolase family hyuA - 3.5.2.2 ko:K01464 ko00240,ko00410,ko00770,ko00983,ko01100,map00240,map00410,map00770,map00983,map01100 M00046 R02269,R03055,R08227 RC00632,RC00680 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Amidohydro_1 HKD3_k127_6007049_3 926560.KE387023_gene2884 8.867e-57 208.0 COG2318@1|root,COG2318@2|Bacteria,1WMM8@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S Mycothiol maleylpyruvate isomerase N-terminal domain - - - - - - - - - - - - DinB_2 HKD3_k127_6007049_4 1144275.COCOR_01398 5.819e-53 192.0 COG0346@1|root,COG0346@2|Bacteria,1RIAM@1224|Proteobacteria,43827@68525|delta/epsilon subdivisions,2X3CD@28221|Deltaproteobacteria,2YVE1@29|Myxococcales 28221|Deltaproteobacteria E Glyoxalase-like domain - - - - - - - - - - - - Glyoxalase HKD3_k127_6007049_6 1121920.AUAU01000030_gene2713 4.948e-45 168.0 2E6X5@1|root,331GM@2|Bacteria,3Y5N8@57723|Acidobacteria 57723|Acidobacteria - - - - - - - - - - - - - - - HKD3_k127_6007049_7 671143.DAMO_0171 1.825e-42 157.0 2C82G@1|root,32RK9@2|Bacteria,2NRTP@2323|unclassified Bacteria 2|Bacteria S Protein of unknown function (DUF4242) - - - - - - - - - - - - DUF4242 HKD3_k127_6007049_8 1499967.BAYZ01000118_gene3252 1.659e-41 156.0 COG0662@1|root,COG0662@2|Bacteria,2NRIV@2323|unclassified Bacteria 2|Bacteria G Cupin domain - - - - - - - - - - - - Cupin_2 HKD3_k127_6007049_1 1123371.ATXH01000019_gene624 1.262e-127 421.0 COG1060@1|root,COG1060@2|Bacteria,2GH1Z@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria H Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) mqnC - 1.21.98.1 ko:K11784 ko00130,ko01110,map00130,map01110 - R08588 RC02329 ko00000,ko00001,ko01000 - - - Radical_SAM HKD3_k127_6007049_5 880073.Calab_0467 4.173e-47 178.0 COG1427@1|root,COG1427@2|Bacteria,2NRPR@2323|unclassified Bacteria 2|Bacteria S Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) mqnA - 1.21.98.1,4.2.1.151 ko:K07081,ko:K11782,ko:K11784 ko00130,ko01110,map00130,map01110 - R08588,R10666 RC02329,RC03232 ko00000,ko00001,ko01000 - - - VitK2_biosynth HKD3_k127_6025702_2 795359.TOPB45_0383 2.132e-35 143.0 COG3945@1|root,COG3945@2|Bacteria 2|Bacteria P hemerythrin HHE cation binding domain - - - - - - - - - - - - Hemerythrin HKD3_k127_6025702_0 452637.Oter_3628 2.343e-131 433.0 COG4198@1|root,COG4198@2|Bacteria,46S83@74201|Verrucomicrobia,3K7UU@414999|Opitutae 414999|Opitutae S Protein of unknown function (DUF1015) - - - - - - - - - - - - DUF1015 HKD3_k127_6025702_1 234267.Acid_3960 1.253e-121 400.0 COG0111@1|root,COG0111@2|Bacteria,3Y7TQ@57723|Acidobacteria 57723|Acidobacteria EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding - - 1.1.1.399,1.1.1.95 ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R01513 RC00031 ko00000,ko00001,ko00002,ko01000,ko04147 - - - 2-Hacid_dh,2-Hacid_dh_C HKD3_k127_6046007_0 1379270.AUXF01000002_gene1723 1.863e-119 414.0 COG4772@1|root,COG4772@2|Bacteria,1ZSWK@142182|Gemmatimonadetes 142182|Gemmatimonadetes P TonB dependent receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - Plug,TonB_dep_Rec HKD3_k127_6046007_1 686578.AFFX01000005_gene4205 8.352e-49 180.0 COG3201@1|root,COG3201@2|Bacteria,1RHIW@1224|Proteobacteria,1T0MT@1236|Gammaproteobacteria 1236|Gammaproteobacteria H nicotinamide mononucleotide transporter pnuC - - ko:K03811 - - - - ko00000,ko02000 4.B.1.1 - - NMN_transporter HKD3_k127_6046007_2 861299.J421_0953 8.388e-38 156.0 COG3172@1|root,COG3172@2|Bacteria,1ZU4R@142182|Gemmatimonadetes 142182|Gemmatimonadetes H AAA domain - - - - - - - - - - - - AAA_28 HKD3_k127_6047175_2 1191523.MROS_0484 2.32e-18 88.0 COG4773@1|root,COG4773@2|Bacteria 2|Bacteria P Receptor - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug,TonB_dep_Rec HKD3_k127_6047175_1 204669.Acid345_2300 2.997e-194 631.0 COG5316@1|root,COG5316@2|Bacteria,3Y46P@57723|Acidobacteria,2JMJ4@204432|Acidobacteriia 204432|Acidobacteriia S Domain of unknown function (DUF4139) - - - - - - - - - - - - DUF4139 HKD3_k127_6047175_0 234267.Acid_6523 1.801e-230 742.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,3Y6FN@57723|Acidobacteria 57723|Acidobacteria EU Dienelactone hydrolase family - - - - - - - - - - - - PD40,Peptidase_S9 HKD3_k127_6067645_11 1385517.N800_12025 1.62e-92 310.0 COG1136@1|root,COG1136@2|Bacteria,1MU45@1224|Proteobacteria,1RR3R@1236|Gammaproteobacteria,1X57K@135614|Xanthomonadales 135614|Xanthomonadales V ABC transporter - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_6067645_20 1047013.AQSP01000143_gene2009 2.073e-45 183.0 COG0457@1|root,COG0457@2|Bacteria 1047013.AQSP01000143_gene2009|- S peptidyl-tyrosine sulfation - - - - - - - - - - - - - HKD3_k127_6067645_21 330214.NIDE4311 4.15e-34 135.0 COG1585@1|root,COG1585@2|Bacteria 2|Bacteria OU cellular response to DNA damage stimulus - - - ko:K07340 - - - - ko00000 - - - NfeD HKD3_k127_6067645_6 330214.NIDE4312 1.135e-131 426.0 COG0330@1|root,COG0330@2|Bacteria,3J0NF@40117|Nitrospirae 40117|Nitrospirae O prohibitin homologues - - - - - - - - - - - - Band_7 HKD3_k127_6067645_18 452637.Oter_0576 1.806e-52 209.0 COG1506@1|root,COG1506@2|Bacteria 2|Bacteria E serine-type peptidase activity - - - - - - - - - - - - AXE1,DLH,Peptidase_S9 HKD3_k127_6067645_3 1499967.BAYZ01000186_gene3977 1.162e-181 583.0 COG1148@1|root,COG1148@2|Bacteria 2|Bacteria C 4fe-4S ferredoxin, iron-sulfur binding domain protein hdrA - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 ko:K03388 ko00680,ko01100,ko01120,ko01200,map00680,map01100,map01120,map01200 M00356,M00357,M00563,M00567 R04540,R11928,R11931,R11943,R11944 RC00011 ko00000,ko00001,ko00002,ko01000 - - - Fer4,Fer4_6,Fer4_7,Pyr_redox_2 HKD3_k127_6067645_13 886293.Sinac_6637 1.261e-79 276.0 COG1163@1|root,COG1163@2|Bacteria,2IWYP@203682|Planctomycetes 203682|Planctomycetes S TGS domain - - - ko:K06944 - - - - ko00000 - - - MMR_HSR1,TGS HKD3_k127_6067645_2 886293.Sinac_0949 2.056e-226 728.0 COG3250@1|root,COG3250@2|Bacteria,2IWTW@203682|Planctomycetes 203682|Planctomycetes G Glycosyl hydrolases family 2 - - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N,Glyco_hydro_43 HKD3_k127_6067645_17 234267.Acid_7677 1.218e-52 192.0 COG1595@1|root,COG1595@2|Bacteria,3Y7UW@57723|Acidobacteria 57723|Acidobacteria K ECF sigma factor - - - - - - - - - - - - Sigma70_ECF HKD3_k127_6067645_7 204669.Acid345_4118 9.942e-113 398.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,3Y2PK@57723|Acidobacteria,2JM7T@204432|Acidobacteriia 57723|Acidobacteria KLTU Protein kinase domain - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PD40,Pkinase HKD3_k127_6067645_0 1267535.KB906767_gene5533 1.109e-290 930.0 COG1629@1|root,COG1629@2|Bacteria,3Y2ZU@57723|Acidobacteria,2JHPF@204432|Acidobacteriia 204432|Acidobacteriia P PFAM TonB-dependent Receptor Plug - - - - - - - - - - - - CarboxypepD_reg,Plug HKD3_k127_6067645_12 243090.RB2092 7.71e-80 275.0 COG2159@1|root,COG2159@2|Bacteria 2|Bacteria E amidohydrolase - - - - - - - - - - - - Amidohydro_2 HKD3_k127_6067645_19 755732.Fluta_0638 5.078e-51 193.0 COG3204@1|root,COG3204@2|Bacteria,4NNIP@976|Bacteroidetes,1I2A1@117743|Flavobacteriia,2PBKP@246874|Cryomorphaceae 976|Bacteroidetes S SdiA-regulated - - - - - - - - - - - - SdiA-regulated HKD3_k127_6067645_9 497964.CfE428DRAFT_0725 1.501e-106 353.0 COG1082@1|root,COG1082@2|Bacteria 2|Bacteria G myo-inosose-2 dehydratase activity - - - - - - - - - - - - AP_endonuc_2,AP_endonuc_2_N HKD3_k127_6067645_4 485918.Cpin_1804 6.941e-167 540.0 COG2730@1|root,COG2730@2|Bacteria,4NF3J@976|Bacteroidetes,1IRPS@117747|Sphingobacteriia 976|Bacteroidetes G Putative collagen-binding domain of a collagenase - - - - - - - - - - - - Collagen_bind_2,DUF4038 HKD3_k127_6067645_14 290397.Adeh_3883 2.547e-66 248.0 COG1032@1|root,COG1032@2|Bacteria,1MWR0@1224|Proteobacteria,42PFW@68525|delta/epsilon subdivisions,2WJ1N@28221|Deltaproteobacteria,2Z1PP@29|Myxococcales 28221|Deltaproteobacteria C B12 binding domain - - - - - - - - - - - - B12-binding,Radical_SAM,TPR_14,TPR_16 HKD3_k127_6067645_10 1172188.KB911823_gene406 7.555e-100 338.0 2CA6T@1|root,33MFF@2|Bacteria,2H6N9@201174|Actinobacteria 201174|Actinobacteria - - - - - - - - - - - - - - - HKD3_k127_6067645_5 452637.Oter_2474 2.424e-148 502.0 COG1752@1|root,COG1752@2|Bacteria,46UXK@74201|Verrucomicrobia 74201|Verrucomicrobia E Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate - - - - - - - - - - - - GMC_oxred_C,GMC_oxred_N HKD3_k127_6067645_1 864051.BurJ1DRAFT_4836 1.359e-280 871.0 COG1502@1|root,COG1502@2|Bacteria,1R4EZ@1224|Proteobacteria,2VUDH@28216|Betaproteobacteria 28216|Betaproteobacteria I PLD-like domain - - - - - - - - - - - - PLDc_2 HKD3_k127_6067645_8 6669.EFX90299 1.464e-112 394.0 COG2304@1|root,2QRPK@2759|Eukaryota,38DTU@33154|Opisthokonta,3BAKW@33208|Metazoa,3D0NY@33213|Bilateria 33208|Metazoa S von Willebrand factor type A domain - - - - - - - - - - - - VIT,VWA_3 HKD3_k127_6067645_22 479434.Sthe_1380 1.31e-22 102.0 COG0789@1|root,COG0789@2|Bacteria,2G9V5@200795|Chloroflexi,27ZCT@189775|Thermomicrobia 189775|Thermomicrobia K helix_turn_helix, mercury resistance - - - - - - - - - - - - MerR_1 HKD3_k127_6067645_15 1300345.LF41_1458 8.081e-66 241.0 COG2309@1|root,COG2309@2|Bacteria 2|Bacteria E aminopeptidase activity - - - ko:K19689 - - - - ko00000,ko01000,ko01002 - - - HTH_20,Peptidase_M29 HKD3_k127_6067645_16 1157708.KB907450_gene5746 5.994e-61 217.0 COG1680@1|root,COG1680@2|Bacteria,1MY4Y@1224|Proteobacteria,2VRGQ@28216|Betaproteobacteria,4ADHS@80864|Comamonadaceae 28216|Betaproteobacteria V Beta-lactamase - - - - - - - - - - - - Beta-lactamase HKD3_k127_6076247_0 1123242.JH636436_gene344 3.651e-56 201.0 COG5658@1|root,COG5658@2|Bacteria,2J142@203682|Planctomycetes 203682|Planctomycetes S SdpI/YhfL protein family - - - - - - - - - - - - DUF1648,SdpI HKD3_k127_6076247_2 1121946.AUAX01000014_gene1201 1.821e-05 58.0 2DMGS@1|root,32RE8@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_6076247_1 1340493.JNIF01000003_gene3161 9.556e-08 58.0 COG1629@1|root,COG3485@1|root,COG3485@2|Bacteria,COG4771@2|Bacteria,3Y3ZU@57723|Acidobacteria 57723|Acidobacteria P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg,Plug,TonB_dep_Rec HKD3_k127_6079883_10 1968.JOEV01000065_gene8824 4.074e-35 157.0 COG0574@1|root,COG0574@2|Bacteria 2|Bacteria G Belongs to the PEP-utilizing enzyme family - - 2.7.9.2 ko:K01007 ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200 M00173,M00374 R00199 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_2101 PPDK_N HKD3_k127_6079883_1 1191523.MROS_1690 2.76e-203 656.0 COG0280@1|root,COG0281@1|root,COG0280@2|Bacteria,COG0281@2|Bacteria 2|Bacteria C malic enzyme maeB GO:0003674,GO:0003824,GO:0004470,GO:0004473,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0055114 1.1.1.38,1.1.1.40,2.3.1.8 ko:K00027,ko:K00029,ko:K00625,ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,ko02020,map00430,map00620,map00640,map00680,map00710,map00720,map01100,map01120,map01200,map02020 M00169,M00172,M00357,M00579 R00214,R00216,R00230,R00921 RC00004,RC00105,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_1637 Malic_M,PTA_PTB,malic HKD3_k127_6079883_2 861299.J421_6016 1.306e-165 550.0 COG2091@1|root,COG2091@2|Bacteria,1ZUKI@142182|Gemmatimonadetes 142182|Gemmatimonadetes H lysine biosynthetic process via aminoadipic acid - - - - - - - - - - - - - HKD3_k127_6079883_0 1047013.AQSP01000111_gene1667 8.693e-223 706.0 COG4690@1|root,COG4690@2|Bacteria 2|Bacteria E dipeptidase activity - - - - - - - - - - - - Peptidase_C69 HKD3_k127_6079883_8 240015.ACP_2335 1.436e-67 237.0 COG0106@1|root,COG0106@2|Bacteria,3Y4TG@57723|Acidobacteria,2JKDT@204432|Acidobacteriia 204432|Acidobacteriia E Belongs to the HisA HisF family - - 5.3.1.16 ko:K01814 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04640 RC00945 ko00000,ko00001,ko00002,ko01000 - - - His_biosynth HKD3_k127_6079883_5 240015.ACP_2336 4.115e-82 285.0 COG0107@1|root,COG0107@2|Bacteria,3Y2MG@57723|Acidobacteria,2JI7H@204432|Acidobacteriia 204432|Acidobacteriia E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit hisF - - ko:K02500 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04558 RC00010,RC01190,RC01943 ko00000,ko00001,ko00002,ko01000 - - - His_biosynth HKD3_k127_6079883_9 240015.ACP_2337 1.112e-46 186.0 COG0118@1|root,COG0118@2|Bacteria,3Y5DZ@57723|Acidobacteria,2JKDU@204432|Acidobacteriia 204432|Acidobacteriia E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR hisH - - ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04558 RC00010,RC01190,RC01943 ko00000,ko00001,ko00002,ko01000 - - - GATase HKD3_k127_6079883_6 1267533.KB906734_gene3664 3.546e-77 272.0 COG0131@1|root,COG0131@2|Bacteria,3Y3DU@57723|Acidobacteria,2JHMN@204432|Acidobacteriia 204432|Acidobacteriia E Imidazoleglycerol-phosphate dehydratase hisB - 4.2.1.19 ko:K01693 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R03457 RC00932 ko00000,ko00001,ko00002,ko01000 - - - IGPD HKD3_k127_6079883_7 1382359.JIAL01000001_gene1159 1.227e-68 251.0 COG0079@1|root,COG0079@2|Bacteria,3Y3M6@57723|Acidobacteria,2JIS3@204432|Acidobacteriia 204432|Acidobacteriia E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily hisC - 2.6.1.9 ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 M00026 R00694,R00734,R03243 RC00006,RC00888 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_1_2 HKD3_k127_6079883_4 234267.Acid_3855 6.65e-89 307.0 COG0141@1|root,COG0141@2|Bacteria,3Y2N7@57723|Acidobacteria 57723|Acidobacteria E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine hisD - 1.1.1.23 ko:K00013 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R01158,R01163,R03012 RC00099,RC00242,RC00463 ko00000,ko00001,ko00002,ko01000 - - - Histidinol_dh HKD3_k127_6079883_3 234267.Acid_3856 1.823e-90 301.0 COG0040@1|root,COG0040@2|Bacteria,3Y31Q@57723|Acidobacteria 57723|Acidobacteria E ATP phosphoribosyltransferase hisG - 2.4.2.17 ko:K00765 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R01071 RC02819,RC03200 ko00000,ko00001,ko00002,ko01000 - - - HisG,HisG_C HKD3_k127_6098894_0 1000565.METUNv1_02832 2.735e-242 758.0 COG2308@1|root,COG2308@2|Bacteria,1MUAD@1224|Proteobacteria,2VI55@28216|Betaproteobacteria,2KV17@206389|Rhodocyclales 206389|Rhodocyclales S Circularly permuted ATP-grasp type 2 - - - - - - - - - - - - CP_ATPgrasp_2 HKD3_k127_6111830_19 56780.SYN_01090 4.695e-12 67.0 COG3829@1|root,COG3829@2|Bacteria,1NU8B@1224|Proteobacteria,43BKG@68525|delta/epsilon subdivisions,2X6YU@28221|Deltaproteobacteria 28221|Deltaproteobacteria KT Transcriptional regulator, Fis family - - - ko:K02584 ko02020,map02020 - - - ko00000,ko00001,ko03000 - - - GAF,GAF_2,HTH_8,PAS_9,Sigma54_activat HKD3_k127_6111830_13 643648.Slip_1894 1.435e-46 175.0 28JE3@1|root,2Z98B@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - AbiEii HKD3_k127_6111830_4 644966.Tmar_0077 6.389e-139 459.0 COG0008@1|root,COG1384@1|root,COG0008@2|Bacteria,COG1384@2|Bacteria,1TPJC@1239|Firmicutes,2482P@186801|Clostridia,3WCIN@538999|Clostridiales incertae sedis 186801|Clostridia J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) gltX - 6.1.1.17 ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 M00121,M00359,M00360 R05578 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 - - - tRNA-synt_1c HKD3_k127_6111830_2 344747.PM8797T_21598 1.501e-147 483.0 COG1520@1|root,COG1520@2|Bacteria,2IXCF@203682|Planctomycetes 203682|Planctomycetes S PQQ-like domain - - - - - - - - - - - - PQQ_2,PQQ_3 HKD3_k127_6111830_3 1168034.FH5T_18125 1.642e-145 475.0 COG1520@1|root,COG1520@2|Bacteria 2|Bacteria S amino acid activation for nonribosomal peptide biosynthetic process - - - - - - - - - - - - PQQ_2 HKD3_k127_6111830_15 1267533.KB906735_gene4737 8.475e-30 126.0 COG1595@1|root,COG1595@2|Bacteria 2|Bacteria K DNA-templated transcription, initiation - - - - - - - - - - - - Sigma70_r2,Sigma70_r4_2 HKD3_k127_6111830_6 1499967.BAYZ01000182_gene4451 4.167e-110 371.0 COG1109@1|root,COG1109@2|Bacteria,2NNM3@2323|unclassified Bacteria 2|Bacteria G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III glmM - 5.4.2.10,5.4.2.2,5.4.2.8 ko:K01840,ko:K03431,ko:K15778 ko00010,ko00030,ko00051,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 M00114 R00959,R01057,R01818,R02060,R08639 RC00408 ko00000,ko00001,ko00002,ko01000 - - - PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV HKD3_k127_6111830_5 1499967.BAYZ01000182_gene4451 1.923e-137 467.0 COG1109@1|root,COG1109@2|Bacteria,2NNM3@2323|unclassified Bacteria 2|Bacteria G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III glmM - 5.4.2.10,5.4.2.2,5.4.2.8 ko:K01840,ko:K03431,ko:K15778 ko00010,ko00030,ko00051,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 M00114 R00959,R01057,R01818,R02060,R08639 RC00408 ko00000,ko00001,ko00002,ko01000 - - - PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV HKD3_k127_6111830_12 344747.PM8797T_03249 6.272e-50 186.0 COG0500@1|root,COG2226@2|Bacteria,2IZZG@203682|Planctomycetes 203682|Planctomycetes Q Methyltransferase domain - - - - - - - - - - - - Methyltransf_25 HKD3_k127_6111830_9 344747.PM8797T_03244 6.03e-68 246.0 COG0644@1|root,COG0644@2|Bacteria,2IZDK@203682|Planctomycetes 203682|Planctomycetes C FAD binding domain - - 1.3.99.38 ko:K21401 - - - - ko00000,ko01000 - - - FAD_binding_3 HKD3_k127_6111830_7 344747.PM8797T_03239 4.759e-110 374.0 COG3424@1|root,COG3424@2|Bacteria,2IYDA@203682|Planctomycetes 203682|Planctomycetes Q Chalcone and stilbene synthases, C-terminal domain - - - - - - - - - - - - Chal_sti_synt_C,Chal_sti_synt_N HKD3_k127_6111830_1 709991.Odosp_3390 1.67e-192 629.0 COG3534@1|root,COG3534@2|Bacteria,4NHR5@976|Bacteroidetes,2G2XU@200643|Bacteroidia,231K5@171551|Porphyromonadaceae 976|Bacteroidetes G Alpha-L-arabinofuranosidase C-terminus - - 3.2.1.55 ko:K01209 ko00520,map00520 - R01762 - ko00000,ko00001,ko01000 - GH51 - Alpha-L-AF_C HKD3_k127_6111830_10 575590.HMPREF0156_00812 2.791e-60 218.0 COG1262@1|root,COG5492@1|root,COG1262@2|Bacteria,COG5492@2|Bacteria,4NEUZ@976|Bacteroidetes 976|Bacteroidetes KLT PFAM Formylglycine-generating sulfatase enzyme - - - - - - - - - - - - Big_2,FGE-sulfatase HKD3_k127_6111830_14 326427.Cagg_1002 1.107e-39 166.0 COG5617@1|root,COG5617@2|Bacteria 2|Bacteria M Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - HKD3_k127_6111830_11 1125863.JAFN01000001_gene1546 1.593e-50 190.0 28PU4@1|root,2ZCF6@2|Bacteria,1RBK2@1224|Proteobacteria,43B3E@68525|delta/epsilon subdivisions,2X6H4@28221|Deltaproteobacteria 28221|Deltaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_6111830_8 477184.KYC_14537 2.316e-86 297.0 COG2242@1|root,COG2242@2|Bacteria,1R0I9@1224|Proteobacteria,2VRVM@28216|Betaproteobacteria,3T1H7@506|Alcaligenaceae 28216|Betaproteobacteria H COG0500 SAM-dependent methyltransferases - - - - - - - - - - - - Methyltransf_31 HKD3_k127_6111830_20 523794.Lebu_0216 9.026e-06 49.0 COG5403@1|root,COG5403@2|Bacteria,37B87@32066|Fusobacteria 32066|Fusobacteria S Bacterial protein of unknown function (DUF937) - - - - - - - - - - - - DUF937 HKD3_k127_6111830_16 338963.Pcar_2064 8.733e-27 111.0 COG2261@1|root,COG2261@2|Bacteria,1NE11@1224|Proteobacteria 1224|Proteobacteria S transglycosylase associated protein - - - - - - - - - - - - Transgly_assoc HKD3_k127_6111830_17 1320556.AVBP01000021_gene341 8.156e-22 97.0 COG3360@1|root,COG3360@2|Bacteria,1N6YT@1224|Proteobacteria,2UKPX@28211|Alphaproteobacteria,43QUB@69277|Phyllobacteriaceae 28211|Alphaproteobacteria S Dodecin - - - ko:K09165 - - - - ko00000 - - - Dodecin HKD3_k127_6111830_0 622637.KE124774_gene1454 4.687e-283 874.0 COG3119@1|root,COG3119@2|Bacteria,1MUJH@1224|Proteobacteria,2TSB8@28211|Alphaproteobacteria 28211|Alphaproteobacteria P arylsulfatase A aslA - 3.1.6.1 ko:K01130 ko00140,ko00600,map00140,map00600 - R03980,R04856 RC00128,RC00231 ko00000,ko00001,ko01000 - - - Sulfatase,Sulfatase_C HKD3_k127_6111902_14 765911.Thivi_0676 4.248e-75 259.0 COG2084@1|root,COG2084@2|Bacteria,1MUGU@1224|Proteobacteria,1RQ2D@1236|Gammaproteobacteria,1WXUX@135613|Chromatiales 135613|Chromatiales I 6-phosphogluconate dehydrogenase, NAD-binding - - 1.1.1.31,1.1.1.60 ko:K00020,ko:K00042 ko00280,ko00630,ko01100,map00280,map00630,map01100 - R01745,R01747,R05066 RC00099 ko00000,ko00001,ko01000 - - - NAD_binding_11,NAD_binding_2 HKD3_k127_6111902_4 234267.Acid_0968 1.264e-205 649.0 COG1012@1|root,COG1012@2|Bacteria,3Y3V5@57723|Acidobacteria 57723|Acidobacteria C Belongs to the aldehyde dehydrogenase family - - 1.2.1.28 ko:K00141,ko:K22187 ko00040,ko00622,ko00623,ko00627,ko01100,ko01120,ko01220,map00040,map00622,map00623,map00627,map01100,map01120,map01220 M00537,M00538 R01293,R01419,R05289,R05663,R05664,R07667,R11768 RC00075,RC00080 ko00000,ko00001,ko00002,ko01000 - - - Aldedh HKD3_k127_6111902_9 234267.Acid_4580 1.943e-115 404.0 COG1680@1|root,COG1680@2|Bacteria 2|Bacteria V peptidase activity dap - 3.4.11.19 ko:K01266 - - - - ko00000,ko01000,ko01002 - - - Beta-lactamase,DAP_B HKD3_k127_6111902_20 1499967.BAYZ01000159_gene535 1.213e-55 196.0 COG1917@1|root,COG1917@2|Bacteria,2NQ91@2323|unclassified Bacteria 2|Bacteria S AraC-like ligand binding domain - - - - - - - - - - - - Cupin_2 HKD3_k127_6111902_17 596324.TREVI0001_0424 9.666e-70 258.0 COG3142@1|root,COG3142@2|Bacteria,2J7H5@203691|Spirochaetes 203691|Spirochaetes P Participates in the control of copper homeostasis cutC - - ko:K06201 - - - - ko00000 - - - CutC HKD3_k127_6111902_1 1047013.AQSP01000144_gene927 9.638e-292 919.0 COG3533@1|root,COG3533@2|Bacteria,2NNW0@2323|unclassified Bacteria 2|Bacteria S Beta-L-arabinofuranosidase, GH127 - - - ko:K09955 - - - - ko00000 - - - F5_F8_type_C,Glyco_hydro_127 HKD3_k127_6111902_18 794903.OPIT5_00615 4.256e-68 239.0 COG2131@1|root,COG2131@2|Bacteria,46WJA@74201|Verrucomicrobia,3K7XK@414999|Opitutae 414999|Opitutae F dCMP deaminase - - 3.5.4.12 ko:K01493 ko00240,ko01100,map00240,map01100 M00429 R01663 RC00074 ko00000,ko00001,ko00002,ko01000,ko02044 - - - dCMP_cyt_deam_1 HKD3_k127_6111902_23 243231.GSU1762 2.064e-40 164.0 COG0457@1|root,COG0457@2|Bacteria,1QXNU@1224|Proteobacteria,43C4R@68525|delta/epsilon subdivisions,2X7F5@28221|Deltaproteobacteria,43SFM@69541|Desulfuromonadales 28221|Deltaproteobacteria S Peptidase MA superfamily - - - - - - - - - - - - Peptidase_MA_2,TPR_16,TPR_2,TPR_8 HKD3_k127_6111902_26 28229.ND2E_3536 7.316e-15 82.0 2DSYW@1|root,33HZI@2|Bacteria,1NKP8@1224|Proteobacteria,1SISV@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_6111902_3 234267.Acid_7180 4.934e-212 679.0 COG1331@1|root,COG1331@2|Bacteria,3Y3AA@57723|Acidobacteria 57723|Acidobacteria O Protein of unknown function, DUF255 - - - ko:K06888 - - - - ko00000 - - - GlcNAc_2-epim,Thioredox_DsbH HKD3_k127_6111902_25 986075.CathTA2_1582 8.024e-17 93.0 COG1295@1|root,COG1295@2|Bacteria,1U7HM@1239|Firmicutes,4H9MJ@91061|Bacilli 91061|Bacilli E Belongs to the UPF0761 family yihY - - ko:K07058 - - - - ko00000 - - - Virul_fac_BrkB HKD3_k127_6111902_2 1382306.JNIM01000001_gene2570 3.612e-255 797.0 COG4799@1|root,COG4799@2|Bacteria,2G61R@200795|Chloroflexi 200795|Chloroflexi I PFAM carboxyl transferase - - 2.1.3.15,6.4.1.3,6.4.1.4 ko:K01969,ko:K15052 ko00280,ko00720,ko01100,ko01200,map00280,map00720,map01100,map01200 M00036,M00376 R01859,R04138 RC00097,RC00367,RC00609,RC00942 ko00000,ko00001,ko00002,ko01000 - - - Carboxyl_trans HKD3_k127_6111902_15 1128421.JAGA01000002_gene1141 5.352e-75 262.0 COG1024@1|root,COG1024@2|Bacteria,2NR3A@2323|unclassified Bacteria 2|Bacteria I Enoyl-CoA hydratase/isomerase atuE - 4.2.1.18,4.2.1.57 ko:K13766,ko:K13779 ko00280,ko00281,ko01100,map00280,map00281,map01100 M00036 R02085,R03493 RC00941,RC02416 ko00000,ko00001,ko00002,ko01000 - - - ECH_1 HKD3_k127_6111902_5 765420.OSCT_1603 2.374e-162 528.0 COG4770@1|root,COG4770@2|Bacteria,2GBIE@200795|Chloroflexi,374S0@32061|Chloroflexia 32061|Chloroflexia I Carbamoyl-phosphate synthetase large chain domain protein - - 6.4.1.4 ko:K01968 ko00280,ko01100,map00280,map01100 M00036 R04138 RC00367,RC00942 ko00000,ko00001,ko00002,ko01000 - - - Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2 HKD3_k127_6111902_27 1089544.KB912942_gene954 9.697e-14 81.0 COG4770@1|root,COG4770@2|Bacteria,2GIZP@201174|Actinobacteria,4DZTM@85010|Pseudonocardiales 201174|Actinobacteria I Acetyl propionyl-CoA carboxylase, alpha subunit accA2 - 6.4.1.1,6.4.1.3,6.4.1.4 ko:K01959,ko:K01965,ko:K01968 ko00020,ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01120,ko01130,ko01200,ko01230,map00020,map00280,map00620,map00630,map00640,map00720,map01100,map01120,map01130,map01200,map01230 M00036,M00173,M00373,M00620,M00741 R00344,R01859,R04138 RC00040,RC00097,RC00367,RC00609,RC00942 ko00000,ko00001,ko00002,ko01000 - - iNJ661.Rv0973c Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2 HKD3_k127_6111902_11 1096546.WYO_4178 1.954e-85 300.0 COG0119@1|root,COG0119@2|Bacteria,1MUMX@1224|Proteobacteria,2TT1R@28211|Alphaproteobacteria,1JTWJ@119045|Methylobacteriaceae 28211|Alphaproteobacteria H PFAM pyruvate carboxyltransferase hmgL - 4.1.3.4 ko:K01640 ko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146 M00036,M00088 R01360,R08090 RC00502,RC00503,RC01118,RC01946 ko00000,ko00001,ko00002,ko01000 - - - HMGL-like HKD3_k127_6111902_16 269796.Rru_A2862 7.21e-72 252.0 COG2267@1|root,COG2267@2|Bacteria,1NK3M@1224|Proteobacteria,2TRP8@28211|Alphaproteobacteria,2JS7D@204441|Rhodospirillales 204441|Rhodospirillales I hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - - - - - - - - - - Abhydrolase_1,Abhydrolase_6 HKD3_k127_6111902_10 471854.Dfer_1708 6.018e-108 375.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NHS5@976|Bacteroidetes,47MWY@768503|Cytophagia 976|Bacteroidetes EU Peptidase S9 prolyl oligopeptidase active site domain protein - - 3.4.19.1 ko:K01303 - - - - ko00000,ko01000,ko01002 - - - PD40,Peptidase_S9 HKD3_k127_6111902_12 1122221.JHVI01000026_gene1334 8.918e-84 287.0 COG2819@1|root,COG2819@2|Bacteria,1WMFX@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S Putative esterase - - - ko:K07017 - - - - ko00000 - - - Esterase HKD3_k127_6111902_19 575594.ACOH01000003_gene750 3.081e-60 238.0 COG0515@1|root,COG0515@2|Bacteria,1TP3F@1239|Firmicutes,4H9KD@91061|Bacilli,3F4G6@33958|Lactobacillaceae 91061|Bacilli KLT serine threonine protein kinase prkC GO:0002237,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009847,GO:0009987,GO:0010033,GO:0010243,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0032494,GO:0032502,GO:0036211,GO:0042221,GO:0042834,GO:0043170,GO:0043207,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070887,GO:0071216,GO:0071219,GO:0071224,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0071944,GO:0097367,GO:0140096,GO:1901564,GO:1901698,GO:1901699,GO:1901700,GO:1901701 2.7.11.1 ko:K08884,ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PASTA,Pkinase HKD3_k127_6111902_7 234267.Acid_3935 1.058e-147 484.0 COG1181@1|root,COG1181@2|Bacteria,3Y9AM@57723|Acidobacteria 57723|Acidobacteria M ATP-grasp domain - - - - - - - - - - - - ATP-grasp_4 HKD3_k127_6111902_21 926550.CLDAP_38560 1.347e-48 177.0 COG1764@1|root,COG1764@2|Bacteria,2G6W8@200795|Chloroflexi 200795|Chloroflexi O PFAM OsmC family protein - - - ko:K04063 - - - - ko00000 - - - OsmC HKD3_k127_6111902_24 1254432.SCE1572_32100 5.195e-34 142.0 COG0524@1|root,COG0524@2|Bacteria,1MUUC@1224|Proteobacteria,42M1U@68525|delta/epsilon subdivisions 1224|Proteobacteria G PFAM PfkB domain protein - - 2.7.1.15,2.7.1.4 ko:K00847,ko:K00852 ko00030,ko00051,ko00500,ko00520,ko01100,map00030,map00051,map00500,map00520,map01100 - R00760,R00867,R01051,R02750,R03920 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PfkB HKD3_k127_6111902_13 1125863.JAFN01000001_gene825 3.911e-75 265.0 arCOG09742@1|root,2ZBGR@2|Bacteria,1R9H3@1224|Proteobacteria,42XHN@68525|delta/epsilon subdivisions,2WT8H@28221|Deltaproteobacteria 28221|Deltaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_6111902_22 671143.DAMO_2747 1.417e-42 172.0 COG2378@1|root,COG2378@2|Bacteria,2NPY6@2323|unclassified Bacteria 2|Bacteria K WYL domain - - - ko:K13572 - - - - ko00000,ko03051 - - - HTH_11,WYL HKD3_k127_6111902_8 237368.SCABRO_02885 4.705e-139 464.0 COG1064@1|root,COG1064@2|Bacteria,2IY4H@203682|Planctomycetes 203682|Planctomycetes C alcohol dehydrogenase - - 1.1.1.1 ko:K13953 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 - R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310 RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273 ko00000,ko00001,ko01000 - - - ADH_N,ADH_zinc_N HKD3_k127_6111902_6 714943.Mucpa_5246 1.298e-155 512.0 COG1740@1|root,COG1740@2|Bacteria,4NK1F@976|Bacteroidetes,1IRKT@117747|Sphingobacteriia 976|Bacteroidetes C COGs COG1740 Ni Fe-hydrogenase I small subunit - - 1.12.99.6 ko:K06282 ko00633,ko01120,map00633,map01120 - R08034 RC00250 ko00000,ko00001,ko01000 - - - NiFe_hyd_SSU_C,Oxidored_q6 HKD3_k127_6111902_0 880073.Calab_3389 5.395e-296 915.0 COG0374@1|root,COG0374@2|Bacteria 2|Bacteria C Belongs to the NiFe NiFeSe hydrogenase large subunit family hyaB GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016151,GO:0016491,GO:0022900,GO:0030288,GO:0030313,GO:0031975,GO:0032991,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0044569,GO:0045333,GO:0046872,GO:0046914,GO:0055114,GO:0071944,GO:1902494 1.12.99.6 ko:K06281 ko00633,ko01120,map00633,map01120 - R08034 RC00250 ko00000,ko00001,ko01000 - - iSbBS512_1146.SbBS512_E2342 NiFeSe_Hases HKD3_k127_6115081_8 469378.Ccur_06850 3.446e-45 171.0 COG0283@1|root,COG0283@2|Bacteria,2H3SI@201174|Actinobacteria,4CV84@84998|Coriobacteriia 84998|Coriobacteriia F Belongs to the cytidylate kinase family. Type 1 subfamily cmk - 2.7.4.25 ko:K00945 ko00240,ko01100,map00240,map01100 M00052 R00158,R00512,R01665 RC00002 ko00000,ko00001,ko00002,ko01000 - - - Acyltransferase,Cytidylate_kin HKD3_k127_6115081_2 1242864.D187_002677 2.19e-108 363.0 COG1073@1|root,COG1073@2|Bacteria,1R4QH@1224|Proteobacteria,43C0C@68525|delta/epsilon subdivisions,2WKKS@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Alpha/beta hydrolase family - - - - - - - - - - - - - HKD3_k127_6115081_4 338966.Ppro_2070 1.3e-80 280.0 COG1187@1|root,COG1187@2|Bacteria,1MUCE@1224|Proteobacteria,42NI7@68525|delta/epsilon subdivisions,2WNPX@28221|Deltaproteobacteria,43U1Z@69541|Desulfuromonadales 28221|Deltaproteobacteria J Belongs to the pseudouridine synthase RsuA family rluB - 5.4.99.21,5.4.99.22 ko:K06178,ko:K06182 - - - - ko00000,ko01000,ko03009 - - - PseudoU_synth_2,S4 HKD3_k127_6115081_10 330214.NIDE1418 2.297e-43 170.0 COG1386@1|root,COG1386@2|Bacteria,3J15Z@40117|Nitrospirae 40117|Nitrospirae D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves scpB - - ko:K06024 - - - - ko00000,ko03036 - - - SMC_ScpB HKD3_k127_6115081_7 243231.GSU1832 3.509e-51 209.0 COG1354@1|root,COG1354@2|Bacteria,1MVCN@1224|Proteobacteria,42RG5@68525|delta/epsilon subdivisions,2WNRE@28221|Deltaproteobacteria,43SVJ@69541|Desulfuromonadales 28221|Deltaproteobacteria D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves scpA - - ko:K05896 - - - - ko00000,ko03036 - - - SMC_ScpA HKD3_k127_6115081_1 648996.Theam_1168 7.803e-114 376.0 COG0180@1|root,COG0180@2|Bacteria,2G3J1@200783|Aquificae 200783|Aquificae J Tryptophanyl-tRNA synthetase trpS GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 ko:K01867 ko00970,map00970 M00359,M00360 R03664 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_1b HKD3_k127_6115081_0 1267534.KB906756_gene503 1.896e-136 454.0 COG0322@1|root,COG0322@2|Bacteria,3Y2Y7@57723|Acidobacteria,2JI6E@204432|Acidobacteriia 204432|Acidobacteriia L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision uvrC - - ko:K03703 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - GIY-YIG,HHH_5,UVR,UvrC_HhH_N HKD3_k127_6115081_9 1267535.KB906767_gene3789 5.25e-45 189.0 COG0558@1|root,COG0558@2|Bacteria,3Y427@57723|Acidobacteria,2JID7@204432|Acidobacteriia 204432|Acidobacteriia I Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - 2.7.8.5 ko:K00995 ko00564,ko01100,map00564,map01100 - R01801 RC00002,RC00017,RC02795 ko00000,ko00001,ko01000 - - - CDP-OH_P_transf HKD3_k127_6115081_5 880073.Calab_0822 1.747e-70 245.0 COG1435@1|root,COG1435@2|Bacteria,2NP88@2323|unclassified Bacteria 2|Bacteria F Thymidine kinase tdk GO:0003674,GO:0003824,GO:0004797,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 ko:K00857 ko00240,ko00983,ko01100,map00240,map00983,map01100 - R01567,R02099,R08233 RC00002,RC00017 ko00000,ko00001,ko01000 - - iLJ478.TM0401 TK HKD3_k127_6115081_6 1267533.KB906735_gene5056 7.751e-52 190.0 COG0231@1|root,COG0231@2|Bacteria,3Y373@57723|Acidobacteria,2JIEA@204432|Acidobacteriia 204432|Acidobacteriia J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase - - - ko:K02356 - - - - ko00000,ko03012 - - - EFP,EFP_N,Elong-fact-P_C HKD3_k127_6115081_11 760142.Hipma_1083 2.878e-26 113.0 COG0071@1|root,COG0071@2|Bacteria,1N7C7@1224|Proteobacteria,42U0T@68525|delta/epsilon subdivisions,2WQ7I@28221|Deltaproteobacteria,2M76J@213113|Desulfurellales 28221|Deltaproteobacteria O CS domain hspA-1 - - ko:K13993 ko04141,map04141 - - - ko00000,ko00001,ko03110 - - - HSP20 HKD3_k127_6115081_3 1121403.AUCV01000017_gene4541 4.303e-87 302.0 COG0265@1|root,COG0265@2|Bacteria,1MU63@1224|Proteobacteria,42NB6@68525|delta/epsilon subdivisions,2WIWE@28221|Deltaproteobacteria,2MHQQ@213118|Desulfobacterales 28221|Deltaproteobacteria M Belongs to the peptidase S1C family - - 3.4.21.107 ko:K04771 ko01503,ko02020,map01503,map02020 M00728 - - ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 - - - PDZ_2,Trypsin_2 HKD3_k127_6121112_2 1444309.JAQG01000033_gene2967 8.146e-80 273.0 COG1162@1|root,COG1162@2|Bacteria,1TP8Q@1239|Firmicutes,4H9PJ@91061|Bacilli,26R2G@186822|Paenibacillaceae 91061|Bacilli S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit rsgA_2 - 3.1.3.100 ko:K06949 ko00730,ko01100,map00730,map01100 - R00615,R02135 RC00002,RC00017 ko00000,ko00001,ko01000,ko03009 - - - RsgA_GTPase HKD3_k127_6121112_4 215803.DB30_2834 8.049e-53 194.0 COG2353@1|root,COG2353@2|Bacteria,1R9XD@1224|Proteobacteria,42T4I@68525|delta/epsilon subdivisions,2X5P2@28221|Deltaproteobacteria,2Z36K@29|Myxococcales 28221|Deltaproteobacteria S YceI-like domain - - - - - - - - - - - - YceI HKD3_k127_6121112_0 234267.Acid_4346 8.787e-246 784.0 COG0154@1|root,COG0154@2|Bacteria,3Y3IP@57723|Acidobacteria 57723|Acidobacteria J Amidase - - 3.5.1.4 ko:K01426 ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120 - R02540,R03096,R03180,R03909,R05551,R05590 RC00010,RC00100,RC00950,RC01025 ko00000,ko00001,ko01000 - - - Amidase HKD3_k127_6121112_1 234267.Acid_2720 3.865e-136 452.0 COG0624@1|root,COG0624@2|Bacteria,3Y2UM@57723|Acidobacteria 57723|Acidobacteria E Peptidase dimerisation domain - - - - - - - - - - - - M20_dimer,Peptidase_M20 HKD3_k127_6121112_3 526227.Mesil_1171 1.885e-54 204.0 COG4221@1|root,COG4221@2|Bacteria,1WIDQ@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S Belongs to the short-chain dehydrogenases reductases (SDR) family - - - - - - - - - - - - adh_short HKD3_k127_6134372_3 370438.PTH_0237 1.066e-10 73.0 COG0600@1|root,COG0600@2|Bacteria,1TR6A@1239|Firmicutes,247VM@186801|Clostridia,261A3@186807|Peptococcaceae 186801|Clostridia P Binding-protein-dependent transport system inner membrane component - - - ko:K02050,ko:K15552 ko00920,ko02010,map00920,map02010 M00188,M00435 - - ko00000,ko00001,ko00002,ko02000 3.A.1.16,3.A.1.17,3.A.1.17.1,3.A.1.17.4 - - BPD_transp_1 HKD3_k127_6134372_1 485913.Krac_2850 2.124e-97 325.0 COG1116@1|root,COG1116@2|Bacteria,2G6KP@200795|Chloroflexi 200795|Chloroflexi P ATPases associated with a variety of cellular activities - - - ko:K02049 - M00188 - - ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 - - ABC_tran HKD3_k127_6134372_0 1459636.NTE_03132 1.472e-104 353.0 COG0715@1|root,arCOG01803@2157|Archaea,41SG5@651137|Thaumarchaeota 651137|Thaumarchaeota P TIGRFAM ABC transporter, substrate-binding protein, aliphatic sulfonates family - - - ko:K02051 - M00188 - - ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 - - NMT1_2 HKD3_k127_6134372_2 309801.trd_0812 1.548e-17 85.0 COG1254@1|root,COG1254@2|Bacteria,2G728@200795|Chloroflexi,27YMW@189775|Thermomicrobia 189775|Thermomicrobia C Acylphosphatase - - 3.6.1.7 ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 - R00317,R01421,R01515 RC00043 ko00000,ko00001,ko01000 - - - Acylphosphatase HKD3_k127_6147636_9 1500257.JQNM01000010_gene639 1.931e-17 83.0 COG0436@1|root,COG0436@2|Bacteria,1MX43@1224|Proteobacteria,2TV9C@28211|Alphaproteobacteria,4B9EH@82115|Rhizobiaceae 28211|Alphaproteobacteria E Aminotransferase class I and II - - - - - - - - - - - - Aminotran_1_2 HKD3_k127_6147636_4 926569.ANT_27540 4.645e-80 283.0 COG0460@1|root,COG0460@2|Bacteria,2G6PU@200795|Chloroflexi 200795|Chloroflexi E homoserine dehydrogenase metM - 1.1.1.3 ko:K00003 ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230 M00017,M00018 R01773,R01775 RC00087 ko00000,ko00001,ko00002,ko01000 - - - ACT,Homoserine_dh,NAD_binding_3 HKD3_k127_6147636_0 644966.Tmar_1754 3.749e-128 422.0 COG1804@1|root,COG1804@2|Bacteria,1TP54@1239|Firmicutes,24AFB@186801|Clostridia,3WD6V@538999|Clostridiales incertae sedis 186801|Clostridia C acyl-CoA transferase carnitine dehydratase - - 2.8.3.19 ko:K18702 - - - - ko00000,ko01000 - - - CoA_transf_3 HKD3_k127_6147636_3 861299.J421_3743 7.815e-83 298.0 COG2805@1|root,COG2805@2|Bacteria,1ZSTM@142182|Gemmatimonadetes 142182|Gemmatimonadetes NU Type II/IV secretion system protein - - - ko:K02669 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - T2SSE HKD3_k127_6147636_7 1041930.Mtc_0196 8.346e-32 141.0 arCOG03980@1|root,arCOG03980@2157|Archaea,2Y3V0@28890|Euryarchaeota,2NAVB@224756|Methanomicrobia 224756|Methanomicrobia M Dolichyl-phosphate-mannose-protein mannosyltransferase - - - - - - - - - - - - PMT_2 HKD3_k127_6147636_8 1380391.JIAS01000012_gene4138 3.404e-31 130.0 COG0546@1|root,COG0546@2|Bacteria,1RDDY@1224|Proteobacteria,2U79T@28211|Alphaproteobacteria,2JSSB@204441|Rhodospirillales 204441|Rhodospirillales S Phosphoglycolate phosphatase cbbZ - 3.1.3.18 ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 - R01334 RC00017 ko00000,ko00001,ko01000 - - - HAD_2 HKD3_k127_6147636_6 530564.Psta_4202 1.466e-47 173.0 COG0720@1|root,COG0720@2|Bacteria,2J000@203682|Planctomycetes 203682|Planctomycetes H COG0720 6-pyruvoyl-tetrahydropterin synthase - - 4.1.2.50,4.2.3.12 ko:K01737 ko00790,ko01100,map00790,map01100 M00842,M00843 R04286,R09959 RC01117,RC02846,RC02847 ko00000,ko00001,ko00002,ko01000,ko03016 - - - PTPS HKD3_k127_6147636_5 530564.Psta_4201 2.78e-50 186.0 COG0603@1|root,COG0603@2|Bacteria,2IZ5W@203682|Planctomycetes 203682|Planctomycetes F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) - - 6.3.4.20 ko:K06920 ko00790,ko01100,map00790,map01100 - R09978 RC00959 ko00000,ko00001,ko01000,ko03016 - - - QueC HKD3_k127_6147636_11 1123256.KB907944_gene423 4.733e-05 57.0 COG3595@1|root,COG3595@2|Bacteria,1P19T@1224|Proteobacteria,1RRSR@1236|Gammaproteobacteria,1X62K@135614|Xanthomonadales 135614|Xanthomonadales S Putative adhesin - - - - - - - - - - - - DUF4097 HKD3_k127_6147636_1 485913.Krac_7537 1.706e-115 383.0 COG1899@1|root,COG1899@2|Bacteria,2G9B5@200795|Chloroflexi 200795|Chloroflexi O Deoxyhypusine synthase - - - - - - - - - - - - DS HKD3_k127_6147636_10 661478.OP10G_0291 5.106e-16 86.0 2DXBK@1|root,344A0@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_6147636_2 1340493.JNIF01000003_gene4593 3.885e-89 315.0 COG2199@1|root,COG2203@1|root,COG3437@1|root,COG2199@2|Bacteria,COG2203@2|Bacteria,COG3437@2|Bacteria,3Y9F7@57723|Acidobacteria 57723|Acidobacteria T HD domain - - - - - - - - - - - - GAF_2,GGDEF HKD3_k127_6153829_3 340.xcc-b100_4464 5.799e-15 78.0 COG0486@1|root,COG0486@2|Bacteria,1MUCQ@1224|Proteobacteria,1RN5S@1236|Gammaproteobacteria,1X3DW@135614|Xanthomonadales 135614|Xanthomonadales J Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 mnmE - - ko:K03650 - - R08701 RC00053,RC00209,RC00870 ko00000,ko01000,ko03016 - - - MMR_HSR1,MnmE_helical,TrmE_N HKD3_k127_6153829_4 439292.Bsel_0266 7.581e-09 59.0 COG3369@1|root,COG3369@2|Bacteria,1VFK3@1239|Firmicutes,4HNHY@91061|Bacilli,26Q1C@186821|Sporolactobacillaceae 91061|Bacilli S Iron-binding zinc finger CDGSH type - - - - - - - - - - - - zf-CDGSH HKD3_k127_6153829_0 1379270.AUXF01000002_gene1184 2.269e-97 328.0 COG5504@1|root,COG5504@2|Bacteria,1ZTCN@142182|Gemmatimonadetes 142182|Gemmatimonadetes O Zn-dependent protease - - - - - - - - - - - - - HKD3_k127_6153829_2 861299.J421_0895 6.602e-33 140.0 COG0705@1|root,COG0705@2|Bacteria,1ZSWV@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Rhomboid family - - - - - - - - - - - - Rhomboid HKD3_k127_6153829_1 471852.Tcur_3455 2.905e-50 181.0 COG1181@1|root,COG1181@2|Bacteria,2GITC@201174|Actinobacteria,4EI19@85012|Streptosporangiales 201174|Actinobacteria M Belongs to the D-alanine--D-alanine ligase family ddl - 6.3.2.4 ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 - R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Dala_Dala_lig_C,Dala_Dala_lig_N HKD3_k127_6173789_0 1449351.RISW2_12335 1.828e-66 235.0 COG0138@1|root,COG0138@2|Bacteria,1MUDQ@1224|Proteobacteria,2TRMY@28211|Alphaproteobacteria,4KM74@93682|Roseivivax 28211|Alphaproteobacteria F Bifunctional purine biosynthesis protein PurH purH - 2.1.2.3,3.5.4.10 ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 M00048 R01127,R04560 RC00026,RC00263,RC00456 ko00000,ko00001,ko00002,ko01000,ko04147 - - - AICARFT_IMPCHas,MGS HKD3_k127_6173789_1 330214.NIDE2553 3.076e-48 181.0 COG2870@1|root,COG2870@2|Bacteria,3J0GT@40117|Nitrospirae 40117|Nitrospirae M Phosphomethylpyrimidine kinase - - 2.7.1.167,2.7.7.70 ko:K03272 ko00540,ko01100,map00540,map01100 M00064 R05644,R05646 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko01005 - - - PfkB HKD3_k127_6175142_5 1517681.HW45_18600 1.14e-66 240.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,1RMCK@1236|Gammaproteobacteria,1XVEB@135623|Vibrionales 135623|Vibrionales T COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - - - - - - - - - - HTH_8,Response_reg,Sigma54_activat HKD3_k127_6175142_2 1047013.AQSP01000128_gene454 9.537e-121 398.0 COG0404@1|root,COG0404@2|Bacteria,2NNSR@2323|unclassified Bacteria 2|Bacteria E The glycine cleavage system catalyzes the degradation of glycine gcvT - 2.1.2.10 ko:K00605 ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200 M00532 R01221,R02300,R04125 RC00022,RC00069,RC00183,RC02834 ko00000,ko00001,ko00002,ko01000 - - - GCV_T,GCV_T_C HKD3_k127_6175142_7 639030.JHVA01000001_gene1686 9.883e-41 156.0 COG0509@1|root,COG0509@2|Bacteria,3Y51Z@57723|Acidobacteria,2JJI2@204432|Acidobacteriia 204432|Acidobacteriia E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein gcvH - - ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 M00532 R01221 RC00022,RC02834 ko00000,ko00001,ko00002 - - - GCV_H HKD3_k127_6175142_0 929556.Solca_4446 0.0 1151.0 COG0403@1|root,COG1003@1|root,COG0403@2|Bacteria,COG1003@2|Bacteria,4NEDE@976|Bacteroidetes,1INQX@117747|Sphingobacteriia 976|Bacteroidetes E The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor gcvP - 1.4.4.2 ko:K00281,ko:K00283 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 M00532 R01221,R03425 RC00022,RC00929,RC02834,RC02880 ko00000,ko00001,ko00002,ko01000 - - - Aminotran_5,GDC-P HKD3_k127_6175142_6 330214.NIDE3737 1.403e-64 238.0 COG0115@1|root,COG0115@2|Bacteria,3J0BM@40117|Nitrospirae 2|Bacteria E Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family pabC - 2.6.1.42,4.1.3.38 ko:K00826,ko:K02619 ko00270,ko00280,ko00290,ko00770,ko00790,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map00790,map01100,map01110,map01130,map01210,map01230 M00019,M00036,M00119,M00570 R01090,R01214,R02199,R05553,R10991 RC00006,RC00036,RC01843,RC02148 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_4 HKD3_k127_6175142_3 370438.PTH_0657 1.526e-116 394.0 COG0062@1|root,COG0063@1|root,COG0062@2|Bacteria,COG0063@2|Bacteria,1TNZE@1239|Firmicutes,2480H@186801|Clostridia,260CR@186807|Peptococcaceae 186801|Clostridia H Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration nnrD - 4.2.1.136,5.1.99.6 ko:K17758,ko:K17759 - - - - ko00000,ko01000 - - - ACPS,Carb_kinase,YjeF_N HKD3_k127_6175142_8 518766.Rmar_2519 9.853e-33 132.0 COG0802@1|root,COG0802@2|Bacteria,4NS89@976|Bacteroidetes,1FJHQ@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes S Threonylcarbamoyl adenosine biosynthesis protein TsaE yjeE - - ko:K06925 - - - - ko00000,ko03016 - - - TsaE HKD3_k127_6175142_1 1123296.JQKE01000031_gene1760 4.334e-178 572.0 COG0516@1|root,COG0517@1|root,COG0516@2|Bacteria,COG0517@2|Bacteria,1MUJM@1224|Proteobacteria,2VH9X@28216|Betaproteobacteria,2KPQ2@206351|Neisseriales 206351|Neisseriales F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth guaB - 1.1.1.205 ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 M00050 R01130,R08240 RC00143,RC02207 ko00000,ko00001,ko00002,ko01000,ko04147 - - - CBS,IMPDH,NMO HKD3_k127_6175142_4 671143.DAMO_0682 1.707e-85 294.0 COG0653@1|root,COG0653@2|Bacteria,2NNRK@2323|unclassified Bacteria 2|Bacteria U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane secA GO:0000166,GO:0002790,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006457,GO:0006605,GO:0006810,GO:0006886,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015627,GO:0015628,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032991,GO:0033036,GO:0033220,GO:0034613,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042802,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061077,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:0098776,GO:1901265,GO:1901363,GO:1904680 - ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4 - - Helicase_C,SEC-C,SecA_DEAD,SecA_PP_bind,SecA_SW HKD3_k127_6183988_11 926569.ANT_24970 1.309e-16 84.0 COG0016@1|root,COG0016@2|Bacteria,2G5T1@200795|Chloroflexi 200795|Chloroflexi J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily pheS - 6.1.1.20 ko:K01889 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Phe_tRNA-synt_N,tRNA-synt_2d HKD3_k127_6183988_12 1244869.H261_05829 0.0001065 51.0 COG4314@1|root,COG4314@2|Bacteria,1N3G0@1224|Proteobacteria 1224|Proteobacteria C lipoprotein involved in nitrous oxide reduction - - - ko:K19342 - - - - ko00000 - - - NosL HKD3_k127_6183988_5 1408445.JHXP01000029_gene1823 3.291e-92 317.0 COG0520@1|root,COG0520@2|Bacteria,1R4SM@1224|Proteobacteria,1RQR6@1236|Gammaproteobacteria,1JFV3@118969|Legionellales 118969|Legionellales E Cys/Met metabolism PLP-dependent enzyme - - - - - - - - - - - - Aminotran_5 HKD3_k127_6183988_10 639030.JHVA01000001_gene1070 1.661e-22 102.0 2D0AC@1|root,32T87@2|Bacteria,3Y56N@57723|Acidobacteria,2JJNM@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - HKD3_k127_6183988_7 671143.DAMO_0834 5.292e-52 192.0 COG1183@1|root,COG1183@2|Bacteria,2NR1K@2323|unclassified Bacteria 2|Bacteria I phosphatidylcholine synthase activity pcs GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0050520,GO:0071704,GO:0090407,GO:1901576 2.7.8.24,2.7.8.8 ko:K01004,ko:K17103 ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110 M00093 R01800,R05794 RC00002,RC00017,RC02795 ko00000,ko00001,ko00002,ko01000 - - - CDP-OH_P_transf HKD3_k127_6183988_8 502025.Hoch_0107 4.445e-37 153.0 COG0564@1|root,COG0564@2|Bacteria,1MVJ5@1224|Proteobacteria,42PI3@68525|delta/epsilon subdivisions,2WJN3@28221|Deltaproteobacteria,2YZZD@29|Myxococcales 28221|Deltaproteobacteria J Belongs to the pseudouridine synthase RluA family - - 5.4.99.23,5.4.99.28,5.4.99.29 ko:K06177,ko:K06180 - - - - ko00000,ko01000,ko03009,ko03016 - - - PseudoU_synth_2 HKD3_k127_6183988_1 1379270.AUXF01000005_gene333 3.754e-170 545.0 COG0534@1|root,COG0534@2|Bacteria,1ZT8D@142182|Gemmatimonadetes 142182|Gemmatimonadetes V MatE - - - - - - - - - - - - MatE HKD3_k127_6183988_0 378806.STAUR_5298 4.83e-195 620.0 COG1115@1|root,COG1115@2|Bacteria,1MUI3@1224|Proteobacteria,42MG1@68525|delta/epsilon subdivisions,2WKHE@28221|Deltaproteobacteria,2YYCK@29|Myxococcales 28221|Deltaproteobacteria E Sodium:alanine symporter family - - - ko:K03310 - - - - ko00000 2.A.25 - - Na_Ala_symp HKD3_k127_6183988_2 290512.Paes_0260 3.772e-117 394.0 COG0498@1|root,COG0498@2|Bacteria,1FDCN@1090|Chlorobi 1090|Chlorobi H TIGRFAM threonine synthase - - 4.2.3.1 ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 M00018 R01466,R05086 RC00017,RC00526 ko00000,ko00001,ko00002,ko01000 - - - PALP,Thr_synth_N HKD3_k127_6183988_6 269798.CHU_0074 2.913e-72 260.0 COG0083@1|root,COG0083@2|Bacteria,4NE2M@976|Bacteroidetes,47KGY@768503|Cytophagia 976|Bacteroidetes E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate thrB - 2.7.1.39 ko:K00872 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 M00018 R01771 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - GHMP_kinases_C,GHMP_kinases_N HKD3_k127_6183988_13 1267535.KB906767_gene2173 0.0004955 52.0 COG2304@1|root,COG2304@2|Bacteria,3Y3QQ@57723|Acidobacteria,2JHV1@204432|Acidobacteriia 204432|Acidobacteriia S von Willebrand factor, type A - - - - - - - - - - - - VWA HKD3_k127_6183988_4 269799.Gmet_1782 3.185e-99 331.0 COG0861@1|root,COG0861@2|Bacteria,1MWC9@1224|Proteobacteria,42MZB@68525|delta/epsilon subdivisions,2WKV4@28221|Deltaproteobacteria,43TDE@69541|Desulfuromonadales 28221|Deltaproteobacteria P Integral membrane protein TerC family - - - - - - - - - - - - TerC HKD3_k127_6183988_3 644282.Deba_2007 9.578e-116 381.0 COG2013@1|root,COG2013@2|Bacteria,1NBBE@1224|Proteobacteria,42N2E@68525|delta/epsilon subdivisions,2WJFV@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Mitochondrial biogenesis AIM24 - - - - - - - - - - - - AIM24,DUF4339 HKD3_k127_6183988_9 926550.CLDAP_09650 9.056e-26 123.0 COG4907@1|root,COG4907@2|Bacteria 2|Bacteria P membrane protein (DUF2207) yciQ GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - - - - - - - - - - DUF2207 HKD3_k127_6184488_1 1123504.JQKD01000003_gene619 3.676e-28 126.0 COG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2VHK8@28216|Betaproteobacteria,4AH4P@80864|Comamonadaceae 28216|Betaproteobacteria S Tripartite tricarboxylate transporter family receptor - - - - - - - - - - - - TctC HKD3_k127_6184488_0 1158292.JPOE01000005_gene827 4.53e-72 259.0 COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2VNJM@28216|Betaproteobacteria,1KJ86@119065|unclassified Burkholderiales 28216|Betaproteobacteria IQ AMP-binding enzyme C-terminal domain - - 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding,AMP-binding_C HKD3_k127_6187726_7 1304883.KI912532_gene67 0.0001019 55.0 COG1450@1|root,COG1450@2|Bacteria,1MVNC@1224|Proteobacteria,2VMZA@28216|Betaproteobacteria,2KU73@206389|Rhodocyclales 206389|Rhodocyclales NU Secretin N-terminal domain - - - ko:K02453,ko:K12282 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - STN,Secretin,Secretin_N_2 HKD3_k127_6187726_3 1487953.JMKF01000024_gene2384 2.736e-32 145.0 COG3225@1|root,COG3225@2|Bacteria,1G0JN@1117|Cyanobacteria,1H8SY@1150|Oscillatoriales 1117|Cyanobacteria N transport system involved in gliding motility, auxiliary component - - - - - - - - - - - - ABC_transp_aux HKD3_k127_6187726_1 395961.Cyan7425_4024 2.072e-44 177.0 COG1277@1|root,COG1277@2|Bacteria,1G272@1117|Cyanobacteria,3KH1I@43988|Cyanothece 1117|Cyanobacteria S PFAM ABC-2 type transporter - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_2,ABC2_membrane_3 HKD3_k127_6187726_0 644966.Tmar_0471 8.018e-79 276.0 COG1131@1|root,COG1131@2|Bacteria,1TQUS@1239|Firmicutes,25AZ1@186801|Clostridia 186801|Clostridia V ABC-type multidrug transport system ATPase component - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_6187726_6 243275.TDE_2531 7.199e-10 64.0 299SZ@1|root,2ZWV7@2|Bacteria,2JAY3@203691|Spirochaetes 203691|Spirochaetes - - - - - - - - - - - - - - - HKD3_k127_6187726_2 879212.DespoDRAFT_02821 1.071e-38 149.0 COG5573@1|root,COG5573@2|Bacteria,1N9U9@1224|Proteobacteria,42X8Z@68525|delta/epsilon subdivisions,2WT8G@28221|Deltaproteobacteria,2MMB8@213118|Desulfobacterales 28221|Deltaproteobacteria S PIN domain - - - - - - - - - - - - PIN HKD3_k127_6187726_5 204669.Acid345_0367 8.347e-11 72.0 COG1136@1|root,COG1136@2|Bacteria,3Y2J0@57723|Acidobacteria,2JIKD@204432|Acidobacteriia 204432|Acidobacteriia V ABC transporter - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_6187726_4 1047013.AQSP01000090_gene672 1.256e-24 111.0 2DF8J@1|root,2ZQXQ@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_6200009_0 1267535.KB906767_gene4699 2.273e-207 675.0 COG4447@1|root,COG4447@2|Bacteria,3Y2MX@57723|Acidobacteria 2|Bacteria S cellulose binding - - - - - - - - - - - - BNR,Sortilin-Vps10 HKD3_k127_6225903_1 1196324.A374_17599 2.333e-72 266.0 COG3227@1|root,COG3227@2|Bacteria,1TP08@1239|Firmicutes,4H9S6@91061|Bacilli 91061|Bacilli E COG3227 Zinc metalloprotease (elastase) npr GO:0005575,GO:0005576 3.4.24.28 ko:K01400 - - - - ko00000,ko01000,ko01002 - - - FTP,PepSY,Peptidase_M4,Peptidase_M4_C HKD3_k127_6225903_3 324602.Caur_1511 2.315e-23 111.0 COG2227@1|root,COG2227@2|Bacteria 2|Bacteria H 3-demethylubiquinone-9 3-O-methyltransferase activity - - - ko:K06219 - - - - ko00000 - - - Methyltransf_11,Methyltransf_23,Methyltransf_25 HKD3_k127_6225903_0 1340493.JNIF01000004_gene20 4.318e-210 668.0 COG1032@1|root,COG1032@2|Bacteria,3Y2FN@57723|Acidobacteria 57723|Acidobacteria C PFAM Radical SAM - - - - - - - - - - - - Radical_SAM HKD3_k127_6225903_2 886293.Sinac_1080 1.013e-43 163.0 COG0800@1|root,COG0800@2|Bacteria,2IXBP@203682|Planctomycetes 203682|Planctomycetes G PFAM KDPG and KHG aldolase - - 4.1.2.14,4.1.3.42 ko:K01625 ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200 M00008,M00061,M00308,M00631 R00470,R05605 RC00307,RC00308,RC00435 ko00000,ko00001,ko00002,ko01000 - - - Aldolase HKD3_k127_6229818_30 1121859.KB890740_gene3836 6.234e-17 81.0 COG3119@1|root,COG3119@2|Bacteria,4NFRB@976|Bacteroidetes 976|Bacteroidetes P Arylsulfatase - - - - - - - - - - - - Sulfatase,Sulfatase_C HKD3_k127_6229818_18 1267535.KB906767_gene4246 3.147e-58 209.0 COG3119@1|root,COG3119@2|Bacteria,3Y679@57723|Acidobacteria 57723|Acidobacteria P Sulfatase - - - - - - - - - - - - Sulfatase,Sulfatase_C HKD3_k127_6229818_1 1122138.AQUZ01000019_gene8188 1.057e-188 603.0 COG2133@1|root,COG2133@2|Bacteria 2|Bacteria G pyrroloquinoline quinone binding sndH - - - - - - - - - - - GSDH HKD3_k127_6229818_22 247639.MGP2080_04535 1.415e-37 143.0 28HGK@1|root,2Z7SE@2|Bacteria,1R43R@1224|Proteobacteria,1RRJ2@1236|Gammaproteobacteria,1J4YD@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria S Malonate/sodium symporter MadM subunit madM - - - - - - - - - - - MadM HKD3_k127_6229818_3 278963.ATWD01000001_gene2872 3.129e-154 497.0 COG4975@1|root,COG4975@2|Bacteria,3Y2SZ@57723|Acidobacteria,2JITY@204432|Acidobacteriia 204432|Acidobacteriia G Sugar transport protein - - - - - - - - - - - - Sugar_transport HKD3_k127_6229818_23 632335.Calkr_1386 2.866e-33 136.0 COG5573@1|root,COG5573@2|Bacteria,1V7GS@1239|Firmicutes,24JFR@186801|Clostridia,42GMN@68295|Thermoanaerobacterales 186801|Clostridia S PFAM PilT protein domain protein - - - - - - - - - - - - PIN HKD3_k127_6229818_25 661478.OP10G_4489 1.129e-29 126.0 2A52F@1|root,30TQU@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_6229818_21 1379270.AUXF01000002_gene1304 6.139e-39 151.0 COG5573@1|root,COG5573@2|Bacteria 2|Bacteria K PIN domain vapC - - - - - - - - - - - PIN HKD3_k127_6229818_10 448385.sce1259 7.652e-98 332.0 COG0287@1|root,COG1605@1|root,COG0287@2|Bacteria,COG1605@2|Bacteria,1QA4K@1224|Proteobacteria,42V3B@68525|delta/epsilon subdivisions,2WRIN@28221|Deltaproteobacteria,2YW0I@29|Myxococcales 28221|Deltaproteobacteria E Prephenate dehydrogenase chorismate mutase - - 1.3.1.12 ko:K00210 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 M00025 R01728 RC00125 ko00000,ko00001,ko00002,ko01000 - - - CM_2,PDH HKD3_k127_6229818_15 38833.XP_003060778.1 1.113e-74 264.0 COG0115@1|root,KOG0975@2759|Eukaryota,37IQ3@33090|Viridiplantae,34GZ7@3041|Chlorophyta 3041|Chlorophyta E Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family - - 2.6.1.42 ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00036,M00119,M00570 R01090,R01214,R02199,R10991 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_4 HKD3_k127_6229818_20 1125701.HMPREF1221_01616 8.239e-44 181.0 COG2407@1|root,COG2407@2|Bacteria 2|Bacteria G Converts the aldose L-fucose into the corresponding ketose L-fuculose - - - - - - - - - - - - - HKD3_k127_6229818_5 234267.Acid_2175 1.65e-133 435.0 COG0673@1|root,COG0673@2|Bacteria,3Y32B@57723|Acidobacteria 57723|Acidobacteria S Oxidoreductase domain protein - - - - - - - - - - - - GFO_IDH_MocA HKD3_k127_6229818_12 234267.Acid_6601 9.021e-90 327.0 COG0265@1|root,COG2203@1|root,COG2208@1|root,COG0265@2|Bacteria,COG2203@2|Bacteria,COG2208@2|Bacteria,3Y4A2@57723|Acidobacteria 57723|Acidobacteria KT Sigma factor PP2C-like phosphatases - - 3.1.3.3 ko:K07315 - - - - ko00000,ko01000,ko03021 - - - GAF_3,RibD_C,SpoIIE HKD3_k127_6229818_7 234267.Acid_5786 5.862e-126 420.0 COG0265@1|root,COG0265@2|Bacteria,3Y2WB@57723|Acidobacteria 57723|Acidobacteria O PFAM peptidase S1 and S6, chymotrypsin Hap - - 3.4.21.107 ko:K04771 ko01503,ko02020,map01503,map02020 M00728 - - ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 - - - PDZ_2,Trypsin_2 HKD3_k127_6229818_9 452637.Oter_1728 4.271e-99 342.0 COG0642@1|root,COG2205@2|Bacteria,46TKR@74201|Verrucomicrobia,3K7YS@414999|Opitutae 452637.Oter_1728|- T histidine kinase HAMP region domain protein - - - - - - - - - - - - - HKD3_k127_6229818_13 596152.DesU5LDRAFT_0203 3.035e-84 286.0 COG0745@1|root,COG0745@2|Bacteria,1MU67@1224|Proteobacteria,42N90@68525|delta/epsilon subdivisions,2WJUU@28221|Deltaproteobacteria,2MA2P@213115|Desulfovibrionales 28221|Deltaproteobacteria T response regulator, receiver - - - ko:K02483 - - - - ko00000,ko02022 - - - Response_reg,Trans_reg_C HKD3_k127_6229818_34 247490.KSU1_B0532 1.762e-10 68.0 COG0288@1|root,COG0288@2|Bacteria 2|Bacteria P reversible hydration of carbon dioxide - - 4.2.1.1 ko:K01673 ko00910,map00910 - R00132,R10092 RC02807 ko00000,ko00001,ko01000 - - - Pro_CA HKD3_k127_6229818_8 309801.trd_A0425 1.126e-115 396.0 COG2268@1|root,COG2268@2|Bacteria,2GBEI@200795|Chloroflexi,27Z5S@189775|Thermomicrobia 189775|Thermomicrobia S Flotillin - - - ko:K07192 ko04910,map04910 - - - ko00000,ko00001,ko03036,ko04131,ko04147 - - - Band_7,Flot HKD3_k127_6229818_32 1121346.KB899841_gene1090 2.827e-12 75.0 COG1585@1|root,COG1585@2|Bacteria,1V90J@1239|Firmicutes,4HM5R@91061|Bacilli,26TT4@186822|Paenibacillaceae 91061|Bacilli OU Membrane protein implicated in regulation of membrane protease activity - - - - - - - - - - - - NfeD HKD3_k127_6229818_33 304371.MCP_0443 7.022e-12 79.0 COG0457@1|root,arCOG03032@2157|Archaea 2157|Archaea T PFAM TPR repeat-containing protein - - - - - - - - - - - - TPR_1,TPR_11,TPR_16,TPR_17,TPR_19,TPR_2,TPR_8 HKD3_k127_6229818_11 439235.Dalk_1881 7.724e-96 342.0 COG0457@1|root,COG1807@1|root,COG0457@2|Bacteria,COG1807@2|Bacteria,1R092@1224|Proteobacteria,43CRV@68525|delta/epsilon subdivisions,2X7ZG@28221|Deltaproteobacteria 28221|Deltaproteobacteria M Tetratricopeptide repeat - - - - - - - - - - - - PMT_2 HKD3_k127_6229818_0 1121930.AQXG01000018_gene756 1.275e-232 752.0 COG1506@1|root,COG1506@2|Bacteria,4NDVD@976|Bacteroidetes,1IR4H@117747|Sphingobacteriia 976|Bacteroidetes E peptidase S9 prolyl oligopeptidase active site domain protein - - - - - - - - - - - - Peptidase_S9 HKD3_k127_6229818_4 1379698.RBG1_1C00001G0607 1.719e-137 466.0 COG0457@1|root,COG0515@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,2NQNE@2323|unclassified Bacteria 2|Bacteria T Serine threonine protein kinase - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PASTA,Pkinase,TPR_2,TPR_8 HKD3_k127_6229818_19 234267.Acid_0090 6.972e-52 192.0 COG0526@1|root,COG0526@2|Bacteria 2|Bacteria CO cell redox homeostasis msrA - 1.1.98.6,1.8.1.9,1.8.4.11,1.8.4.12 ko:K00384,ko:K12057,ko:K12267,ko:K21636 ko00230,ko00240,ko00450,ko01100,map00230,map00240,map00450,map01100 M00053 R02016,R03596,R09372,R11633,R11634,R11635,R11636 RC00013,RC00613,RC02518,RC02873 ko00000,ko00001,ko00002,ko01000,ko02044 3.A.7.11.1 - - AhpC-TSA,PMSR,Pyr_redox_2,SelR,Thioredoxin,Thioredoxin_3,Thioredoxin_7,TraF HKD3_k127_6229818_26 234267.Acid_0090 4.696e-24 115.0 COG0526@1|root,COG0526@2|Bacteria 2|Bacteria CO cell redox homeostasis msrA - 1.1.98.6,1.8.1.9,1.8.4.11,1.8.4.12 ko:K00384,ko:K12057,ko:K12267,ko:K21636 ko00230,ko00240,ko00450,ko01100,map00230,map00240,map00450,map01100 M00053 R02016,R03596,R09372,R11633,R11634,R11635,R11636 RC00013,RC00613,RC02518,RC02873 ko00000,ko00001,ko00002,ko01000,ko02044 3.A.7.11.1 - - AhpC-TSA,PMSR,Pyr_redox_2,SelR,Thioredoxin,Thioredoxin_3,Thioredoxin_7,TraF HKD3_k127_6229818_2 234267.Acid_3971 6.218e-160 514.0 COG1252@1|root,COG1252@2|Bacteria,3Y308@57723|Acidobacteria 57723|Acidobacteria C PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - 1.6.99.3 ko:K03885 ko00190,map00190 - - - ko00000,ko00001,ko01000 - - - Pyr_redox_2 HKD3_k127_6229818_28 382464.ABSI01000010_gene3866 2.782e-19 96.0 2DX1N@1|root,32V2J@2|Bacteria 2|Bacteria S Protein of unknown function (DUF3788) - - - - - - - - - - - - DUF3788 HKD3_k127_6229818_27 234267.Acid_4263 4.7e-22 112.0 COG2304@1|root,COG2304@2|Bacteria,3Y2IE@57723|Acidobacteria 2|Bacteria S PFAM von Willebrand factor type A - - - ko:K07114,ko:K12511 - - - - ko00000,ko02000,ko02044 1.A.13.2.2,1.A.13.2.3 - - FHA,VWA,VWA_2 HKD3_k127_6229818_31 1379270.AUXF01000004_gene2876 5.704e-14 80.0 28WI0@1|root,314YJ@2|Bacteria,1ZV2B@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HKD3_k127_6229818_16 497964.CfE428DRAFT_0921 1.857e-59 220.0 COG4112@1|root,COG4112@2|Bacteria,46V3C@74201|Verrucomicrobia 74201|Verrucomicrobia - - - - - - - - - - - - - - - HKD3_k127_6229818_29 866536.Belba_0530 5.619e-19 96.0 COG0457@1|root,COG0457@2|Bacteria,4NJ7M@976|Bacteroidetes,47N78@768503|Cytophagia 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_2,TPR_6,TPR_8 HKD3_k127_6229818_24 694427.Palpr_2946 5.975e-33 132.0 2BFHQ@1|root,329BH@2|Bacteria,4P73M@976|Bacteroidetes,2FZWT@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - HKD3_k127_6229818_14 1142394.PSMK_12900 2.957e-83 302.0 COG2103@1|root,COG2103@2|Bacteria 2|Bacteria G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate - - 4.2.1.126 ko:K07106 ko00520,ko01100,map00520,map01100 - R08555 RC00397,RC00746 ko00000,ko00001,ko01000 - - - - HKD3_k127_6229818_17 706587.Desti_4875 9.328e-59 211.0 COG2220@1|root,COG2220@2|Bacteria,1QB9E@1224|Proteobacteria,42N7W@68525|delta/epsilon subdivisions,2WNMC@28221|Deltaproteobacteria,2MQPI@213462|Syntrophobacterales 28221|Deltaproteobacteria S Beta-lactamase superfamily domain - - - - - - - - - - - - Lactamase_B_3 HKD3_k127_6229818_6 234267.Acid_5749 3.447e-131 446.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria 2|Bacteria U Involved in the tonB-independent uptake of proteins - - 2.7.11.1 ko:K08884,ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PD40,Pkinase,WD40 HKD3_k127_6274284_2 693977.Deipr_0211 1.431e-57 209.0 COG0566@1|root,COG0566@2|Bacteria,1WIZZ@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family - - 2.1.1.185 ko:K03218 - - - - ko00000,ko01000,ko03009 - - - SpoU_methylase,SpoU_sub_bind HKD3_k127_6274284_0 1047013.AQSP01000138_gene1020 3.697e-150 490.0 COG0008@1|root,COG0008@2|Bacteria,2NNMZ@2323|unclassified Bacteria 2|Bacteria J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) gltX GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.17,6.1.1.24 ko:K01885,ko:K09698 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 M00121,M00359,M00360 R03651,R05578 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 - - - tRNA-synt_1c HKD3_k127_6274284_1 401526.TcarDRAFT_0127 9.449e-88 303.0 COG0245@1|root,COG1211@1|root,COG0245@2|Bacteria,COG1211@2|Bacteria,1V3P0@1239|Firmicutes,4H2VG@909932|Negativicutes 909932|Negativicutes H Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) ispF - 2.7.7.60,4.6.1.12 ko:K01770,ko:K12506 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05633,R05637 RC00002,RC01440 ko00000,ko00001,ko00002,ko01000 - - - IspD,YgbB HKD3_k127_6274284_5 1499967.BAYZ01000050_gene2795 3.08e-32 135.0 COG3382@1|root,COG3382@2|Bacteria,2NPUN@2323|unclassified Bacteria 2|Bacteria S B3/4 domain - - - - - - - - - - - - B3_4 HKD3_k127_6274284_3 1340493.JNIF01000003_gene2985 2.47e-46 181.0 COG0204@1|root,COG0204@2|Bacteria,3Y4EM@57723|Acidobacteria 57723|Acidobacteria I Phosphate acyltransferases - - 2.3.1.51 ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R02241,R09381 RC00004,RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Acyltransferase HKD3_k127_6274284_4 234267.Acid_1863 1.638e-38 146.0 COG4956@1|root,COG4956@2|Bacteria,3Y2RT@57723|Acidobacteria 57723|Acidobacteria S Large family of predicted nucleotide-binding domains - - - - - - - - - - - - TRAM HKD3_k127_6274727_6 998674.ATTE01000001_gene970 2.909e-06 51.0 COG1881@1|root,COG1881@2|Bacteria,1NQK5@1224|Proteobacteria,1S0T6@1236|Gammaproteobacteria 1236|Gammaproteobacteria S YHYH protein - - - - - - - - - - - - PBP,YHYH HKD3_k127_6274727_1 1394178.AWOO02000018_gene6642 1.376e-34 154.0 COG1262@1|root,COG1262@2|Bacteria,2GK9Q@201174|Actinobacteria,4EH55@85012|Streptosporangiales 201174|Actinobacteria S Sulfatase-modifying factor enzyme 1 - GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005509,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016667,GO:0016670,GO:0018158,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046872,GO:0046914,GO:0055114,GO:0071704,GO:0120147,GO:1901564,GO:1903135,GO:1903136 - - - - - - - - - - FGE-sulfatase HKD3_k127_6274727_0 1304872.JAGC01000003_gene2354 5.557e-119 417.0 COG1520@1|root,COG1520@2|Bacteria,1NYGT@1224|Proteobacteria,42TY0@68525|delta/epsilon subdivisions,2WQ74@28221|Deltaproteobacteria,2M9SS@213115|Desulfovibrionales 28221|Deltaproteobacteria S Arylsulfotransferase (ASST) - - - - - - - - - - - - Arylsulfotran_2,Arylsulfotrans HKD3_k127_6274727_5 243231.GSU0330 2.355e-11 73.0 COG3031@1|root,COG3031@2|Bacteria 2|Bacteria U protein transport across the cell outer membrane gspC - - ko:K02452,ko:K02463 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - PDZ_2,T2SSC HKD3_k127_6274727_4 323259.Mhun_0420 7.845e-13 81.0 COG3291@1|root,COG4870@1|root,arCOG03991@1|root,arCOG02510@2157|Archaea,arCOG03607@2157|Archaea,arCOG03991@2157|Archaea,arCOG05189@2157|Archaea,2XWQ1@28890|Euryarchaeota 28890|Euryarchaeota O Papain family cysteine protease - - - - - - - - - - - - PKD,Peptidase_C1 HKD3_k127_6274727_2 760192.Halhy_1558 1.763e-30 137.0 COG0265@1|root,COG1262@1|root,COG0265@2|Bacteria,COG1262@2|Bacteria,4NEUZ@976|Bacteroidetes,1IY04@117747|Sphingobacteriia 976|Bacteroidetes O PFAM Formylglycine-generating sulfatase enzyme - - - - - - - - - - - - FGE-sulfatase,Peptidase_C14,Trypsin_2 HKD3_k127_6274727_3 192952.MM_1588 1.231e-17 89.0 COG3291@1|root,arCOG02510@2157|Archaea,arCOG05189@2157|Archaea,2Y30D@28890|Euryarchaeota,2NAGI@224756|Methanomicrobia 224756|Methanomicrobia S Periplasmic copper-binding protein (NosD) - - - - - - - - - - - - NosD,PKD HKD3_k127_6278394_0 5911.EAR90273 4.402e-28 130.0 COG0457@1|root,COG3914@1|root,KOG0591@1|root,KOG0591@2759|Eukaryota,KOG1124@2759|Eukaryota,KOG4626@2759|Eukaryota,3ZD0M@5878|Ciliophora 5878|Ciliophora GOT TPR Domain containing protein - - - - - - - - - - - - Pkinase,TPR_1,TPR_8 HKD3_k127_6290992_0 234267.Acid_5688 1.006e-190 620.0 COG1009@1|root,COG1009@2|Bacteria,3Y2VS@57723|Acidobacteria 2|Bacteria CP NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein nuoL-1 - 1.6.5.3 ko:K00341 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Proton_antipo_C,Proton_antipo_M,Proton_antipo_N HKD3_k127_6302763_3 870187.Thini_3576 1.028e-16 84.0 COG4118@1|root,COG4118@2|Bacteria 2|Bacteria D positive regulation of growth - - 3.1.3.5 ko:K01081 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 - R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346 RC00017 ko00000,ko00001,ko01000 - - - PhdYeFM_antitox HKD3_k127_6302763_2 671143.DAMO_0789 1.498e-45 173.0 COG3744@1|root,COG3744@2|Bacteria,2NRIX@2323|unclassified Bacteria 2|Bacteria S PIN domain - - - - - - - - - - - - PIN HKD3_k127_6302763_0 1121396.KB893111_gene1921 1.447e-114 381.0 COG2843@1|root,COG2843@2|Bacteria,1P1MG@1224|Proteobacteria,42UTJ@68525|delta/epsilon subdivisions,2X5J6@28221|Deltaproteobacteria,2MKI5@213118|Desulfobacterales 28221|Deltaproteobacteria M Bacterial capsule synthesis protein PGA_cap - - - ko:K07282 - - - - ko00000 - - - PGA_cap HKD3_k127_6302763_1 1121396.KB893111_gene1919 3.608e-98 332.0 COG1181@1|root,COG1181@2|Bacteria,1MX3I@1224|Proteobacteria,42SA1@68525|delta/epsilon subdivisions,2WNIR@28221|Deltaproteobacteria 68525|delta/epsilon subdivisions F Belongs to the D-alanine--D-alanine ligase family - - 6.3.2.4 ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 - R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Dala_Dala_lig_C HKD3_k127_6308391_8 794903.OPIT5_01685 3.805e-30 124.0 COG1538@1|root,COG1538@2|Bacteria,46U6A@74201|Verrucomicrobia,3K9BH@414999|Opitutae 414999|Opitutae MU Outer membrane efflux protein - - - ko:K18139 ko01501,ko02024,map01501,map02024 M00642,M00643,M00647,M00718,M00768,M00822 - - ko00000,ko00001,ko00002,ko01504,ko02000 1.B.17,2.A.6.2 - - OEP HKD3_k127_6308391_10 204669.Acid345_2978 1.65e-09 66.0 2CIGC@1|root,33XM2@2|Bacteria,3Y7X9@57723|Acidobacteria,2JN04@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - HKD3_k127_6308391_9 368407.Memar_1772 2.086e-17 91.0 COG1226@1|root,arCOG01958@2157|Archaea 2157|Archaea P COG1226 Kef-type K transport systems - - - ko:K10716 - - - - ko00000,ko02000 1.A.1.1,1.A.1.13,1.A.1.17,1.A.1.24,1.A.1.25,1.A.1.6 - - Ion_trans_2,TrkA_N HKD3_k127_6308391_1 768671.ThimaDRAFT_4559 8.951e-199 634.0 COG0659@1|root,COG0659@2|Bacteria,1MWDF@1224|Proteobacteria,1SYC8@1236|Gammaproteobacteria,1WXWA@135613|Chromatiales 135613|Chromatiales U sulphate transporter - - - - - - - - - - - - STAS,Sulfate_transp HKD3_k127_6308391_4 204669.Acid345_2054 1.031e-109 380.0 COG4389@1|root,COG4389@2|Bacteria,3Y4EU@57723|Acidobacteria,2JKDZ@204432|Acidobacteriia 204432|Acidobacteriia L Site-specific recombinase - - - - - - - - - - - - SpecificRecomb HKD3_k127_6308391_5 391625.PPSIR1_25911 3.583e-92 313.0 COG0668@1|root,COG0668@2|Bacteria,1N596@1224|Proteobacteria,42Z2D@68525|delta/epsilon subdivisions,2WU1J@28221|Deltaproteobacteria,2YUYR@29|Myxococcales 28221|Deltaproteobacteria M Mechanosensitive ion channel - - - ko:K03442 - - - - ko00000,ko02000 1.A.23.2 - - MS_channel HKD3_k127_6308391_7 566466.NOR53_2636 1.215e-41 169.0 29D6U@1|root,3004T@2|Bacteria,1R9I1@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - HKD3_k127_6308391_6 246197.MXAN_4007 3.352e-60 227.0 COG3637@1|root,COG3637@2|Bacteria,1QXUM@1224|Proteobacteria 1224|Proteobacteria M Domain of unknown function (DUF3943) - - - - - - - - - - - - DUF3943 HKD3_k127_6308391_2 1278073.MYSTI_05376 2.946e-194 622.0 COG2211@1|root,COG2211@2|Bacteria,1QTSE@1224|Proteobacteria,43C8U@68525|delta/epsilon subdivisions,2X7J6@28221|Deltaproteobacteria,2Z3H1@29|Myxococcales 28221|Deltaproteobacteria G Acetyl-coenzyme A transporter 1 - - - ko:K08218 ko01501,map01501 M00628 - - ko00000,ko00001,ko00002,ko02000 2.A.1.25 - - MFS_1 HKD3_k127_6308391_3 1454004.AW11_00194 7.403e-148 492.0 COG3264@1|root,COG3264@2|Bacteria,1QUDC@1224|Proteobacteria,2VJMG@28216|Betaproteobacteria 28216|Betaproteobacteria M mechanosensitive ion channel - - - - - - - - - - - - MS_channel HKD3_k127_6308391_0 1236959.BAMT01000001_gene1175 7.076e-253 793.0 COG0046@1|root,COG0047@1|root,COG0046@2|Bacteria,COG0047@2|Bacteria,1MYN4@1224|Proteobacteria,2VHTE@28216|Betaproteobacteria,2KKQX@206350|Nitrosomonadales 206350|Nitrosomonadales F Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate purL - 6.3.5.3 ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04463 RC00010,RC01160 ko00000,ko00001,ko00002,ko01000 - - - AIRS_C,GATase_5 HKD3_k127_6330974_0 234267.Acid_7763 5.013e-193 633.0 COG1200@1|root,COG1200@2|Bacteria,3Y31Z@57723|Acidobacteria 57723|Acidobacteria L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) recG - 3.6.4.12 ko:K03655 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C,RecG_wedge HKD3_k127_6330974_2 349124.Hhal_2308 1.157e-29 134.0 COG0742@1|root,COG0742@2|Bacteria,1MXKW@1224|Proteobacteria,1RN21@1236|Gammaproteobacteria,1WY3H@135613|Chromatiales 135613|Chromatiales L Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle - - 2.1.1.171 ko:K08316 - - R07234 RC00003 ko00000,ko01000,ko03009 - - - Cons_hypoth95 HKD3_k127_6330974_1 234267.Acid_7275 1.403e-62 222.0 COG0669@1|root,COG0669@2|Bacteria,3Y4B6@57723|Acidobacteria 57723|Acidobacteria H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate coaD - 2.7.7.3 ko:K00954 ko00770,ko01100,map00770,map01100 M00120 R03035 RC00002 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_like HKD3_k127_6331461_1 234267.Acid_2664 3.133e-150 481.0 COG2755@1|root,COG2755@2|Bacteria 2|Bacteria E lipolytic protein G-D-S-L family - - - - - - - - - - - - Cadherin,Cellulase,Lipase_GDSL_2,PA14,RicinB_lectin_2 HKD3_k127_6331461_0 861299.J421_4518 6.942e-263 828.0 COG3534@1|root,COG3534@2|Bacteria 2|Bacteria G alpha-L-arabinofuranosidase - - 3.2.1.55 ko:K01209 ko00520,map00520 - R01762 - ko00000,ko00001,ko01000 - GH51 - Alpha-L-AF_C HKD3_k127_6331461_3 991905.SL003B_3944 7.841e-50 189.0 COG1237@1|root,COG1237@2|Bacteria,1NK2I@1224|Proteobacteria,2TTSG@28211|Alphaproteobacteria 28211|Alphaproteobacteria S beta-lactamase - - 2.5.1.105 ko:K06897 ko00790,map00790 - R10339 RC00121 ko00000,ko00001,ko01000 - - - Lactamase_B HKD3_k127_6331461_2 525904.Tter_2323 2.835e-66 237.0 COG0684@1|root,COG0684@2|Bacteria 2|Bacteria H ribonuclease inhibitor activity - - - - - - - - - - - - RraA-like HKD3_k127_6413685_2 357808.RoseRS_0683 4.626e-51 201.0 COG0438@1|root,COG0438@2|Bacteria,2G6Z9@200795|Chloroflexi,3755I@32061|Chloroflexia 32061|Chloroflexia M PFAM glycosyl transferase group 1 - - - - - - - - - - - - Glyco_trans_1_4,Glycos_transf_1 HKD3_k127_6413685_4 1232410.KI421424_gene1780 3.884e-37 143.0 COG0838@1|root,COG0838@2|Bacteria,1RGUT@1224|Proteobacteria,42UPV@68525|delta/epsilon subdivisions,2WQB6@28221|Deltaproteobacteria,43UXF@69541|Desulfuromonadales 28221|Deltaproteobacteria C NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 nuoA - 1.6.5.3 ko:K00330 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q4 HKD3_k127_6413685_1 671143.DAMO_1605 5.705e-70 240.0 COG0377@1|root,COG0377@2|Bacteria,2NP84@2323|unclassified Bacteria 2|Bacteria C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoB - 1.6.5.3 ko:K00331 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q6 HKD3_k127_6413685_5 1150626.PHAMO_270203 3.922e-32 132.0 COG0852@1|root,COG0852@2|Bacteria,1MX4B@1224|Proteobacteria,2TSMT@28211|Alphaproteobacteria,2JR93@204441|Rhodospirillales 204441|Rhodospirillales C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoC - 1.6.5.3 ko:K00332 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Complex1_30kDa HKD3_k127_6413685_3 546274.EIKCOROL_01302 2.334e-49 186.0 COG0279@1|root,COG0279@2|Bacteria,1NJ8X@1224|Proteobacteria,2VN12@28216|Betaproteobacteria,2KPW6@206351|Neisseriales 206351|Neisseriales G Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate gmhA - 5.3.1.28 ko:K03271 ko00540,ko01100,map00540,map01100 M00064 R05645,R09768,R09769 RC00434 ko00000,ko00001,ko00002,ko01000,ko01005 - - - SIS_2 HKD3_k127_6413685_0 326427.Cagg_1046 1.377e-98 328.0 COG0649@1|root,COG0649@2|Bacteria,2G5MM@200795|Chloroflexi,3751Y@32061|Chloroflexia 32061|Chloroflexia C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoD1 - 1.6.5.3 ko:K00333 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Complex1_49kDa HKD3_k127_6425981_1 234267.Acid_0490 5.198e-73 248.0 COG0243@1|root,COG0437@1|root,COG0243@2|Bacteria,COG0437@2|Bacteria,3Y2Z0@57723|Acidobacteria 57723|Acidobacteria C 4Fe-4S dicluster domain - - - ko:K00184 - - - - ko00000 5.A.3 - - Fer4_7,Molydop_binding HKD3_k127_6425981_0 1128421.JAGA01000003_gene2871 8.096e-217 680.0 COG5557@1|root,COG5557@2|Bacteria,2NNNQ@2323|unclassified Bacteria 2|Bacteria C Polysulphide reductase, NrfD nrfD - - ko:K00185 - - - - ko00000 5.A.3 - - DUF3341,NrfD HKD3_k127_6425981_3 1128421.JAGA01000003_gene2872 1.063e-67 234.0 COG2010@1|root,COG2010@2|Bacteria,2NPSE@2323|unclassified Bacteria 2|Bacteria C Protein of unknown function (DUF3341) - - - - - - - - - - - - DUF3341 HKD3_k127_6425981_2 204669.Acid345_3000 9.05e-68 237.0 COG2010@1|root,COG2010@2|Bacteria,3Y2MN@57723|Acidobacteria,2JI6T@204432|Acidobacteriia 204432|Acidobacteriia C Cytochrome C oxidase, cbb3-type, subunit III - - - - - - - - - - - - Cytochrome_CBB3 HKD3_k127_6435954_3 1121439.dsat_0427 2.122e-24 102.0 COG1830@1|root,COG1830@2|Bacteria,1MW9N@1224|Proteobacteria,42PEB@68525|delta/epsilon subdivisions,2WM0Y@28221|Deltaproteobacteria,2M98D@213115|Desulfovibrionales 28221|Deltaproteobacteria G PFAM deoxyribose-phosphate aldolase phospho-2-dehydro-3-deoxyheptonate aldolase fbaB - 4.1.2.13 ko:K11645 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00003 R01068,R01070,R01829,R02568 RC00438,RC00439,RC00603,RC00604 ko00000,ko00001,ko00002,ko01000 - - - DeoC HKD3_k127_6435954_4 1121920.AUAU01000001_gene2260 1.771e-19 102.0 COG2827@1|root,COG2827@2|Bacteria 2|Bacteria L Endonuclease containing a URI domain yhbQ GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - ko:K07461 - - - - ko00000 - - - GIY-YIG HKD3_k127_6435954_2 1121468.AUBR01000001_gene508 1.704e-28 127.0 COG0836@1|root,COG0836@2|Bacteria,1TPC9@1239|Firmicutes,24908@186801|Clostridia,42FA6@68295|Thermoanaerobacterales 186801|Clostridia M PFAM Nucleotidyl transferase manC - 2.7.7.13,5.3.1.8 ko:K00971,ko:K16011 ko00051,ko00520,ko01100,ko01110,ko01130,ko02025,map00051,map00520,map01100,map01110,map01130,map02025 M00114,M00361,M00362 R00885,R01819 RC00002,RC00376 ko00000,ko00001,ko00002,ko01000 - - - MannoseP_isomer,NTP_transferase HKD3_k127_6435954_6 1297742.A176_04135 2.97e-07 58.0 2EFSR@1|root,339IR@2|Bacteria 2|Bacteria S Protein of unknown function (DUF2934) - - - - - - - - - - - - DUF2934 HKD3_k127_6435954_5 1291050.JAGE01000001_gene2388 1.184e-16 92.0 COG0604@1|root,COG0604@2|Bacteria,1TT5J@1239|Firmicutes,24H1R@186801|Clostridia 186801|Clostridia C alcohol dehydrogenase - - - - - - - - - - - - - HKD3_k127_6435954_1 1234364.AMSF01000077_gene1855 3.881e-32 128.0 COG1695@1|root,COG1695@2|Bacteria,1N3KH@1224|Proteobacteria,1SAGS@1236|Gammaproteobacteria,1XAJV@135614|Xanthomonadales 135614|Xanthomonadales K Transcriptional regulator PadR-like family - - - - - - - - - - - - PadR HKD3_k127_6435954_0 861299.J421_5652 1.246e-106 354.0 COG3669@1|root,COG3669@2|Bacteria 2|Bacteria G Alpha-L-fucosidase - - 3.2.1.51 ko:K01206 ko00511,map00511 - - - ko00000,ko00001,ko01000,ko04147 - GH29 - Alpha_L_fucos HKD3_k127_6449540_21 864051.BurJ1DRAFT_3799 2.534e-05 52.0 COG2937@1|root,COG2937@2|Bacteria,1MWZ6@1224|Proteobacteria,2W5VT@28216|Betaproteobacteria 28216|Betaproteobacteria I Belongs to the GPAT DAPAT family plsB - 2.3.1.15 ko:K00631 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R00851,R09380 RC00004,RC00039,RC00041 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Acyltransferase HKD3_k127_6449540_10 1128421.JAGA01000003_gene2936 4.383e-83 286.0 COG0506@1|root,COG0506@2|Bacteria,2NPED@2323|unclassified Bacteria 2|Bacteria E Proline dehydrogenase - - - ko:K00318 ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130 - R10507 RC00083 ko00000,ko00001,ko01000 - - - Pro_dh HKD3_k127_6449540_6 234267.Acid_1304 2.824e-108 390.0 COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,3Y3SU@57723|Acidobacteria 2|Bacteria P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg,Plug,TonB_dep_Rec HKD3_k127_6449540_8 1267533.KB906733_gene3362 1.457e-95 335.0 COG0457@1|root,COG3710@1|root,COG5616@1|root,COG0457@2|Bacteria,COG3710@2|Bacteria,COG5616@2|Bacteria,3Y7E7@57723|Acidobacteria,2JKGS@204432|Acidobacteriia 204432|Acidobacteriia K Transcriptional regulatory protein, C terminal - - - - - - - - - - - - Trans_reg_C HKD3_k127_6449540_22 443144.GM21_2127 0.0002961 52.0 COG5492@1|root,COG5492@2|Bacteria,1QYX0@1224|Proteobacteria 1224|Proteobacteria N Protein of unknown function (DUF3443) - - - - - - - - - - - - Big_2,DUF3443 HKD3_k127_6449540_19 571.MC52_30130 3.706e-07 59.0 COG3385@1|root,COG3385@2|Bacteria,1RBZF@1224|Proteobacteria,1S381@1236|Gammaproteobacteria 1236|Gammaproteobacteria L Transposase DDE domain - - - - - - - - - - - - DDE_Tnp_1 HKD3_k127_6449540_3 404589.Anae109_2847 1.928e-127 422.0 COG0823@1|root,COG0823@2|Bacteria,1QW3I@1224|Proteobacteria,42YA5@68525|delta/epsilon subdivisions,2WU6I@28221|Deltaproteobacteria,2Z3J0@29|Myxococcales 28221|Deltaproteobacteria U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 HKD3_k127_6449540_4 1469245.JFBG01000027_gene1490 1.121e-117 394.0 COG0617@1|root,COG0617@2|Bacteria,1MU2X@1224|Proteobacteria,1RPFJ@1236|Gammaproteobacteria,1WWKR@135613|Chromatiales 135613|Chromatiales J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases cca - 2.7.7.72 ko:K00974 ko03013,map03013 - R09382,R09383,R09384,R09386 RC00078 ko00000,ko00001,ko01000,ko03016 - - - HD,PolyA_pol,PolyA_pol_RNAbd HKD3_k127_6449540_0 639030.JHVA01000001_gene841 1.223e-232 746.0 COG0204@1|root,COG1022@1|root,COG0204@2|Bacteria,COG1022@2|Bacteria,3Y3GW@57723|Acidobacteria,2JHKK@204432|Acidobacteriia 204432|Acidobacteriia I Phosphate acyltransferases - - 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding,AMP-binding_C,Acyltransferase,PP-binding HKD3_k127_6449540_18 448385.sce3861 2.754e-22 114.0 COG0457@1|root,COG0789@1|root,COG0457@2|Bacteria,COG0789@2|Bacteria,1PQD2@1224|Proteobacteria,4323R@68525|delta/epsilon subdivisions,2WXJB@28221|Deltaproteobacteria,2Z10C@29|Myxococcales 28221|Deltaproteobacteria K Tetratricopeptide repeat - - - - - - - - - - - - MerR_1,TPR_1,TPR_17,TPR_8 HKD3_k127_6449540_5 1162668.LFE_1855 9.711e-117 387.0 COG0489@1|root,COG0489@2|Bacteria,3J0Z6@40117|Nitrospirae 40117|Nitrospirae D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP - - - ko:K03593 - - - - ko00000,ko03029,ko03036 - - - ParA HKD3_k127_6449540_2 472759.Nhal_2027 2.4e-146 482.0 COG0778@1|root,COG0778@2|Bacteria,1Q0G9@1224|Proteobacteria,1RS1G@1236|Gammaproteobacteria,1WXVJ@135613|Chromatiales 135613|Chromatiales C TIGRFAM SagB-type dehydrogenase domain - - - - - - - - - - - - Nitroreductase HKD3_k127_6449540_16 319225.Plut_0343 1.204e-44 184.0 COG5000@1|root,COG5000@2|Bacteria 2|Bacteria T phosphorelay sensor kinase activity - - - - - - - - - - - - HAMP,HATPase_c,HisKA,PAS,PAS_4,PAS_9,dCache_1 HKD3_k127_6449540_1 324925.Ppha_1319 9.114e-151 489.0 COG2204@1|root,COG2204@2|Bacteria 2|Bacteria T phosphorelay signal transduction system - - - ko:K02481,ko:K07713,ko:K07714 ko02020,map02020 M00499,M00500 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat HKD3_k127_6449540_20 880073.Calab_2923 1.338e-05 58.0 290EY@1|root,2ZN47@2|Bacteria,2NRVY@2323|unclassified Bacteria 880073.Calab_2923|- - - - - - - - - - - - - - - - HKD3_k127_6449540_15 880073.Calab_2922 6.161e-57 222.0 28K48@1|root,2Z9T8@2|Bacteria,2NR0P@2323|unclassified Bacteria 2|Bacteria S Domain of unknown function (DUF4405) - - - - - - - - - - - - DUF4405 HKD3_k127_6449540_17 485915.Dret_1862 1.199e-26 111.0 COG0450@1|root,COG0450@2|Bacteria,1NBK9@1224|Proteobacteria,42VFJ@68525|delta/epsilon subdivisions,2WRB3@28221|Deltaproteobacteria,2MDBU@213115|Desulfovibrionales 28221|Deltaproteobacteria O PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - - - - - - - - - - AhpC-TSA HKD3_k127_6449540_11 713586.KB900536_gene1627 5.699e-77 259.0 COG0450@1|root,COG0450@2|Bacteria,1MWPY@1224|Proteobacteria,1RN4S@1236|Gammaproteobacteria 1236|Gammaproteobacteria O alkyl hydroperoxide reductase ahpC GO:0003674,GO:0003824,GO:0004601,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009321,GO:0009605,GO:0009636,GO:0009970,GO:0009987,GO:0009991,GO:0010033,GO:0016209,GO:0016491,GO:0016667,GO:0016671,GO:0016684,GO:0019725,GO:0030003,GO:0031667,GO:0031668,GO:0031669,GO:0032843,GO:0032991,GO:0033194,GO:0033195,GO:0033212,GO:0033214,GO:0033554,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071496,GO:0097237,GO:0098754,GO:0098771,GO:0098869,GO:1901700,GO:1902494,GO:1990204,GO:1990748 1.11.1.15 ko:K03386 ko04214,map04214 - - - ko00000,ko00001,ko01000,ko04147 - - - 1-cysPrx_C,AhpC-TSA HKD3_k127_6449540_13 1121920.AUAU01000013_gene1709 4.375e-66 232.0 arCOG10401@1|root,2ZA7Y@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_6449540_12 323259.Mhun_1323 2.206e-76 265.0 COG2014@1|root,arCOG03216@2157|Archaea 2157|Archaea S Putative heavy-metal chelation - - - ko:K09138 - - - - ko00000 - - - DUF364,DUF4213 HKD3_k127_6449540_14 177437.HRM2_13950 3.043e-64 242.0 2AJX3@1|root,31AK2@2|Bacteria,1NWRV@1224|Proteobacteria,4300K@68525|delta/epsilon subdivisions,2WVGP@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Putative outer membrane beta-barrel porin, MtrB/PioB - - - - - - - - - - - - MtrB_PioB HKD3_k127_6449540_9 243231.GSU2203 5.149e-88 301.0 COG3005@1|root,COG3005@2|Bacteria,1RHMA@1224|Proteobacteria,43DN4@68525|delta/epsilon subdivisions,2X6GA@28221|Deltaproteobacteria 28221|Deltaproteobacteria C Cytochrome c3 - - - - - - - - - - - - Paired_CXXCH_1 HKD3_k127_6449540_7 269799.Gmet_2689 3.266e-104 344.0 COG0372@1|root,COG0372@2|Bacteria,1MUKX@1224|Proteobacteria,42N8U@68525|delta/epsilon subdivisions,2WJAN@28221|Deltaproteobacteria,43UBB@69541|Desulfuromonadales 28221|Deltaproteobacteria H Belongs to the citrate synthase family gltA - 2.3.3.1 ko:K01647 ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00740 R00351 RC00004,RC00067 br01601,ko00000,ko00001,ko00002,ko01000 - - - Citrate_synt HKD3_k127_6452754_0 316056.RPC_0703 2.195e-283 875.0 COG0493@1|root,COG0543@1|root,COG0493@2|Bacteria,COG0543@2|Bacteria,1MU2H@1224|Proteobacteria,2TQK5@28211|Alphaproteobacteria,3JSD0@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - 1.4.1.13,1.4.1.14 ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 - R00093,R00114,R00248 RC00006,RC00010,RC02799 ko00000,ko00001,ko01000 - - - DHODB_Fe-S_bind,Fer4_20,Pyr_redox_2 HKD3_k127_6453309_0 765911.Thivi_1388 4.524e-61 218.0 COG2015@1|root,COG2015@2|Bacteria,1MU82@1224|Proteobacteria,1RMHR@1236|Gammaproteobacteria 1236|Gammaproteobacteria Q COG2015 Alkyl sulfatase and related hydrolases BDS1 - - - - - - - - - - - Alkyl_sulf_C,Alkyl_sulf_dimr,Lactamase_B HKD3_k127_6453309_2 1041146.ATZB01000008_gene2191 5.973e-10 69.0 2DHNV@1|root,300EI@2|Bacteria,1PQR7@1224|Proteobacteria,2V33F@28211|Alphaproteobacteria,4BK3B@82115|Rhizobiaceae 28211|Alphaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_6453309_1 1212548.B381_16805 7.478e-36 149.0 COG0583@1|root,COG0583@2|Bacteria,1RI7F@1224|Proteobacteria,1S8C2@1236|Gammaproteobacteria,1Z3Q7@136846|Pseudomonas stutzeri group 1236|Gammaproteobacteria K Bacterial regulatory helix-turn-helix protein, lysR family - - - - - - - - - - - - HTH_1,LysR_substrate HKD3_k127_6453309_3 1218074.BAXZ01000006_gene1785 9.578e-08 55.0 COG3103@1|root,COG4991@2|Bacteria,1N1ZX@1224|Proteobacteria,2VSMT@28216|Betaproteobacteria,1K8ZW@119060|Burkholderiaceae 28216|Betaproteobacteria T Bacterial SH3 domain homologues - - - - - - - - - - - - SH3_3,SH3_4 HKD3_k127_6461968_1 555779.Dthio_PD2814 1.067e-106 352.0 COG1830@1|root,COG1830@2|Bacteria,1MW9N@1224|Proteobacteria,42PEB@68525|delta/epsilon subdivisions,2WM0Y@28221|Deltaproteobacteria,2M98D@213115|Desulfovibrionales 28221|Deltaproteobacteria G PFAM deoxyribose-phosphate aldolase phospho-2-dehydro-3-deoxyheptonate aldolase fbaB - 4.1.2.13 ko:K11645 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00003 R01068,R01070,R01829,R02568 RC00438,RC00439,RC00603,RC00604 ko00000,ko00001,ko00002,ko01000 - - - DeoC HKD3_k127_6461968_0 357808.RoseRS_0181 7.208e-141 456.0 COG1373@1|root,COG1373@2|Bacteria 2|Bacteria V ATPase (AAA superfamily - - - ko:K07133 - - - - ko00000 - - - AAA_14,DUF4143 HKD3_k127_6461968_3 522306.CAP2UW1_2189 7.116e-73 255.0 2E3TX@1|root,32YRB@2|Bacteria,1NAJY@1224|Proteobacteria,2VX3D@28216|Betaproteobacteria 28216|Betaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_6461968_4 204669.Acid345_0206 1.576e-49 181.0 COG2989@1|root,COG2989@2|Bacteria,3Y2YW@57723|Acidobacteria,2JIFK@204432|Acidobacteriia 2|Bacteria S ErfK YbiS YcfS YnhG family protein ycbB - - ko:K21470 - - - - ko00000,ko01002,ko01011 - - - PG_binding_1,YkuD HKD3_k127_6461968_5 517417.Cpar_2041 6.559e-49 181.0 COG3187@1|root,COG3187@2|Bacteria 2|Bacteria O response to heat - - - - - - - - - - - - META HKD3_k127_6461968_2 1385519.N801_12800 4.906e-93 322.0 COG3540@1|root,COG3540@2|Bacteria,2IMZY@201174|Actinobacteria 201174|Actinobacteria P PhoD-like phosphatase - - 3.1.3.1 ko:K01113 ko00790,ko01100,ko02020,map00790,map01100,map02020 M00126 R04620 RC00017 ko00000,ko00001,ko00002,ko01000 - - - PhoD HKD3_k127_6461968_7 316275.VSAL_I1765 1.53e-19 99.0 COG0671@1|root,COG0671@2|Bacteria,1N3TP@1224|Proteobacteria,1SADV@1236|Gammaproteobacteria,1Y2AB@135623|Vibrionales 135623|Vibrionales I Acid phosphatase homologues - - - - - - - - - - - - PAP2 HKD3_k127_6461968_6 324925.Ppha_0246 5.133e-28 121.0 COG4775@1|root,COG4775@2|Bacteria,1FDNH@1090|Chlorobi 1090|Chlorobi M Surface antigen - - - - - - - - - - - - Bac_surface_Ag HKD3_k127_6477509_0 1265505.ATUG01000003_gene591 7.986e-71 248.0 COG2804@1|root,COG2804@2|Bacteria,1R5CG@1224|Proteobacteria,42YMR@68525|delta/epsilon subdivisions,2WUA4@28221|Deltaproteobacteria,2MN3B@213118|Desulfobacterales 28221|Deltaproteobacteria NU Type II secretion system (T2SS), protein E, N-terminal domain - - - - - - - - - - - - T2SSE,T2SSE_N HKD3_k127_6477509_1 1210884.HG799463_gene10120 8.327e-58 203.0 COG2706@1|root,COG2706@2|Bacteria,2IY02@203682|Planctomycetes 203682|Planctomycetes G COG2706 3-carboxymuconate cyclase - - 3.1.1.31 ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 M00004,M00006,M00008 R02035 RC00537 ko00000,ko00001,ko00002,ko01000 - - - Lactonase HKD3_k127_6477509_5 456442.Mboo_1771 2.436e-06 52.0 arCOG07904@1|root,arCOG07904@2157|Archaea 2157|Archaea - - - - - - - - - - - - - - Mut7-C HKD3_k127_6477509_3 929556.Solca_2680 1.235e-49 190.0 COG2885@1|root,COG2885@2|Bacteria,4NI3U@976|Bacteroidetes,1IQ3S@117747|Sphingobacteriia 976|Bacteroidetes M Belongs to the ompA family - - - ko:K03286 - - - - ko00000,ko02000 1.B.6 - - OMP_b-brl_2,OmpA HKD3_k127_6477509_4 555779.Dthio_PD1671 2.097e-12 72.0 COG1994@1|root,COG1994@2|Bacteria,1NSFF@1224|Proteobacteria,42STM@68525|delta/epsilon subdivisions,2WPAD@28221|Deltaproteobacteria,2MB8X@213115|Desulfovibrionales 28221|Deltaproteobacteria S PFAM peptidase M50 - - - - - - - - - - - - Peptidase_M50 HKD3_k127_6477509_2 234267.Acid_4321 2.749e-55 214.0 COG5002@1|root,COG5002@2|Bacteria 2|Bacteria T protein histidine kinase activity - - - - - - - - - - - - HATPase_c,HisKA HKD3_k127_6487081_11 204669.Acid345_1602 2.794e-08 61.0 COG4968@1|root,COG4968@2|Bacteria,3Y98E@57723|Acidobacteria,2JP4Y@204432|Acidobacteriia 57723|Acidobacteria NU Pfam:N_methyl_2 - - - - - - - - - - - - N_methyl HKD3_k127_6487081_10 204669.Acid345_1602 3.959e-09 68.0 COG4968@1|root,COG4968@2|Bacteria,3Y98E@57723|Acidobacteria,2JP4Y@204432|Acidobacteriia 57723|Acidobacteria NU Pfam:N_methyl_2 - - - - - - - - - - - - N_methyl HKD3_k127_6487081_8 404589.Anae109_3126 7.895e-29 130.0 COG1651@1|root,COG4243@1|root,COG1651@2|Bacteria,COG4243@2|Bacteria,1QSA7@1224|Proteobacteria,42T4Y@68525|delta/epsilon subdivisions,2WPNT@28221|Deltaproteobacteria 28221|Deltaproteobacteria O Thiol disulfide interchange protein dsbA - - - - - - - - - - - - DSBA,Thioredoxin_4,VKOR HKD3_k127_6487081_1 204669.Acid345_1571 1.143e-88 302.0 COG1131@1|root,COG1131@2|Bacteria,3Y7J3@57723|Acidobacteria,2JMS8@204432|Acidobacteriia 204432|Acidobacteriia V ABC transporter - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_6487081_4 330214.NIDE3434 2.198e-57 217.0 COG1277@1|root,COG1277@2|Bacteria 2|Bacteria - - pilI - - - - - - - - - - - ABC2_membrane_2 HKD3_k127_6487081_7 204669.Acid345_1573 3.842e-42 175.0 COG0457@1|root,COG0457@2|Bacteria 204669.Acid345_1573|- S peptidyl-tyrosine sulfation - - - - - - - - - - - - - HKD3_k127_6487081_3 243231.GSU2043 4.622e-63 231.0 COG1989@1|root,COG1989@2|Bacteria,1MUZF@1224|Proteobacteria,42S2A@68525|delta/epsilon subdivisions,2WMQ8@28221|Deltaproteobacteria,43TK2@69541|Desulfuromonadales 28221|Deltaproteobacteria M Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue pilD - 3.4.23.43 ko:K02654 - M00331 - - ko00000,ko00002,ko01000,ko01002,ko02035,ko02044 3.A.15.2 - - DiS_P_DiS,Peptidase_A24 HKD3_k127_6487081_2 682795.AciX8_2025 8.69e-85 295.0 COG0337@1|root,COG0337@2|Bacteria,3Y2T4@57723|Acidobacteria,2JI0C@204432|Acidobacteriia 204432|Acidobacteriia E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) aroB - 4.2.3.4 ko:K01735 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R03083 RC00847 ko00000,ko00001,ko00002,ko01000 - - - DHQ_synthase HKD3_k127_6487081_0 1304880.JAGB01000002_gene2254 8.299e-199 631.0 COG0442@1|root,COG0442@2|Bacteria,1TRBV@1239|Firmicutes,249PY@186801|Clostridia 186801|Clostridia J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS proS GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.15 ko:K01881 ko00970,map00970 M00359,M00360 R03661 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - HGTP_anticodon,ProRS-C_1,tRNA-synt_2b HKD3_k127_6487081_5 335543.Sfum_0692 1.265e-56 208.0 COG0805@1|root,COG0805@2|Bacteria,1MVAY@1224|Proteobacteria,42MM7@68525|delta/epsilon subdivisions,2WKJW@28221|Deltaproteobacteria,2MQFF@213462|Syntrophobacterales 28221|Deltaproteobacteria U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides tatC - - ko:K03118 ko03060,ko03070,map03060,map03070 M00336 - - ko00000,ko00001,ko00002,ko02044 2.A.64 - - TatC HKD3_k127_6487081_9 1047013.AQSP01000099_gene1496 8.491e-17 85.0 COG1826@1|root,COG1826@2|Bacteria,2NQ3N@2323|unclassified Bacteria 2|Bacteria U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system tatA - - ko:K03116,ko:K03117,ko:K03646 ko03060,ko03070,map03060,map03070 M00336 - - ko00000,ko00001,ko00002,ko02000,ko02044 2.A.64,2.C.1.2 - - MttA_Hcf106 HKD3_k127_6487081_6 671143.DAMO_2530 2.268e-54 204.0 COG0793@1|root,COG0793@2|Bacteria,2NNVZ@2323|unclassified Bacteria 2|Bacteria M Belongs to the peptidase S41A family ctpA - 3.4.21.102 ko:K03797 - - - - ko00000,ko01000,ko01002 - - - PDZ,PDZ_2,Peptidase_S41 HKD3_k127_6513090_5 1121957.ATVL01000009_gene1201 4.122e-104 343.0 COG2170@1|root,COG2170@2|Bacteria,4NFFP@976|Bacteroidetes,47KG2@768503|Cytophagia 976|Bacteroidetes S ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity ybdK - - ko:K06048 - - - - ko00000,ko01000 - - - GCS2 HKD3_k127_6513090_4 926550.CLDAP_22640 9.232e-114 377.0 COG0189@1|root,COG0189@2|Bacteria,2G864@200795|Chloroflexi 200795|Chloroflexi HJ ligase activity - - - - - - - - - - - - - HKD3_k127_6513090_6 316274.Haur_4830 1.112e-96 344.0 COG2308@1|root,COG2308@2|Bacteria,2G7ZB@200795|Chloroflexi,3754D@32061|Chloroflexia 32061|Chloroflexia S Evidence 4 Homologs of previously reported genes of - - - - - - - - - - - - CP_ATPgrasp_2 HKD3_k127_6513090_11 485918.Cpin_5941 7.661e-06 59.0 COG0518@1|root,COG0518@2|Bacteria,4NGC3@976|Bacteroidetes,1IPYJ@117747|Sphingobacteriia 976|Bacteroidetes F GMP synthase-glutamine amidotransferase - - - - - - - - - - - - GATase HKD3_k127_6513090_7 945713.IALB_2676 1.549e-57 209.0 COG4947@1|root,COG4947@2|Bacteria 2|Bacteria P esterase XK27_05675 - - - - - - - - - - - Esterase HKD3_k127_6513090_10 1288484.APCS01000059_gene2811 1.403e-07 58.0 COG0607@1|root,COG0607@2|Bacteria,1WJYP@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus P COG0607 Rhodanese-related sulfurtransferase - - - - - - - - - - - - Rhodanese HKD3_k127_6513090_0 671143.DAMO_2283 0.0 1242.0 COG0474@1|root,COG0474@2|Bacteria,2NNSC@2323|unclassified Bacteria 2|Bacteria P Cation transporter/ATPase, N-terminus - - 3.6.3.8 ko:K01537 - - - - ko00000,ko01000 3.A.3.2 - - Cation_ATPase,Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase,Hydrolase_3 HKD3_k127_6513090_1 861299.J421_0240 8.633e-193 632.0 COG2091@1|root,COG2091@2|Bacteria,1ZUPU@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Carbohydrate family 9 binding domain-like - - - - - - - - - - - - CBM9_1 HKD3_k127_6513090_8 344747.PM8797T_30312 8.335e-36 141.0 COG0589@1|root,COG0589@2|Bacteria,2J042@203682|Planctomycetes 203682|Planctomycetes T COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - - - - - - - - - - Usp HKD3_k127_6513090_3 401053.AciPR4_0365 5.402e-124 413.0 COG0165@1|root,COG0165@2|Bacteria,3Y7F3@57723|Acidobacteria,2JM7C@204432|Acidobacteriia 204432|Acidobacteriia E Argininosuccinate lyase C-terminal - - 4.3.2.1 ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 M00029,M00844,M00845 R01086 RC00445,RC00447 ko00000,ko00001,ko00002,ko01000,ko04147 - - - ASL_C2,Lyase_1 HKD3_k127_6513090_2 861299.J421_1758 6.224e-188 603.0 COG0591@1|root,COG0591@2|Bacteria,1ZT93@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Sodium:solute symporter family - - - - - - - - - - - - SSF HKD3_k127_6513090_9 395961.Cyan7425_1646 1.529e-22 102.0 COG2402@1|root,COG2402@2|Bacteria,1G56E@1117|Cyanobacteria,3KJUH@43988|Cyanothece 1117|Cyanobacteria S nucleic acid-binding protein, contains PIN domain - - - ko:K07065 - - - - ko00000 - - - PIN HKD3_k127_6541937_4 391587.KAOT1_12237 7.278e-21 96.0 COG1520@1|root,COG1520@2|Bacteria,4NHPR@976|Bacteroidetes,1HXXS@117743|Flavobacteriia 976|Bacteroidetes G Arylsulfotransferase (ASST) - - - - - - - - - - - - Arylsulfotrans HKD3_k127_6541937_0 573370.DMR_01530 1.769e-185 601.0 COG3678@1|root,COG4932@1|root,COG3678@2|Bacteria,COG4932@2|Bacteria 2|Bacteria M domain protein espK GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - ko:K02005,ko:K06006,ko:K07803,ko:K13735,ko:K18491,ko:K20276 ko02020,ko02024,ko04550,ko05100,map02020,map02024,map04550,map05100 - - - ko00000,ko00001,ko03000,ko03110 - - - CarboxypepD_reg,LTXXQ HKD3_k127_6541937_3 886377.Murru_3307 4.435e-53 199.0 COG3291@1|root,COG3291@2|Bacteria,4NH7R@976|Bacteroidetes,1IJC3@117743|Flavobacteriia 976|Bacteroidetes S Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 HKD3_k127_6541937_1 234267.Acid_2466 1.5e-110 389.0 COG0457@1|root,COG0515@1|root,COG5616@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,COG5616@2|Bacteria,3Y6VR@57723|Acidobacteria 57723|Acidobacteria KLT Protein tyrosine kinase - - 2.7.11.1 ko:K08282,ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase HKD3_k127_6541937_2 1379270.AUXF01000001_gene1966 8.296e-73 262.0 2CESB@1|root,2Z8UZ@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_6542323_4 614083.AWQR01000009_gene555 3.482e-09 59.0 COG5606@1|root,COG5606@2|Bacteria,1NA3S@1224|Proteobacteria,2VT34@28216|Betaproteobacteria,4AFPZ@80864|Comamonadaceae 28216|Betaproteobacteria K Helix-turn-helix domain - - - - - - - - - - - - HTH_37 HKD3_k127_6542323_2 1121015.N789_13020 5.87e-33 139.0 COG0123@1|root,COG0123@2|Bacteria,1MU7P@1224|Proteobacteria,1RPVZ@1236|Gammaproteobacteria 1236|Gammaproteobacteria BQ COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - - - - - - - - - - Hist_deacetyl HKD3_k127_6542323_5 648757.Rvan_0649 1.265e-06 51.0 COG5573@1|root,COG5573@2|Bacteria,1N454@1224|Proteobacteria,2UDGY@28211|Alphaproteobacteria 28211|Alphaproteobacteria S PIN domain - - - - - - - - - - - - PIN HKD3_k127_6542323_0 1185876.BN8_02199 1.178e-159 511.0 2DBK2@1|root,2Z9Q1@2|Bacteria,4NET4@976|Bacteroidetes,47MUQ@768503|Cytophagia 976|Bacteroidetes - - - - - - - - - - - - - - - HKD3_k127_6542323_1 1254432.SCE1572_07790 3.26e-154 507.0 COG0348@1|root,COG1143@1|root,COG0348@2|Bacteria,COG1143@2|Bacteria,1MY5M@1224|Proteobacteria,43BPV@68525|delta/epsilon subdivisions,2WJVS@28221|Deltaproteobacteria,2YW51@29|Myxococcales 28221|Deltaproteobacteria C 4Fe-4S binding domain - - - - - - - - - - - - Fer4,Fer4_5,Fer4_7 HKD3_k127_6542323_3 502025.Hoch_5084 7.467e-24 102.0 COG1842@1|root,COG1842@2|Bacteria,1R9B6@1224|Proteobacteria 1224|Proteobacteria KT Phage shock protein A, PspA - - - ko:K03969 - - - - ko00000 - - - PspA_IM30 HKD3_k127_6628398_1 589865.DaAHT2_0475 3.479e-213 669.0 COG1523@1|root,COG1523@2|Bacteria,1MU19@1224|Proteobacteria,42P3J@68525|delta/epsilon subdivisions,2WKFS@28221|Deltaproteobacteria 28221|Deltaproteobacteria G Belongs to the glycosyl hydrolase 13 family - - 3.2.1.68 ko:K01214 ko00500,ko01100,ko01110,map00500,map01100,map01110 M00565 R09995,R11261 - ko00000,ko00001,ko00002,ko01000 - CBM48,GH13 - Alpha-amylase,CBM_48 HKD3_k127_6628398_2 266117.Rxyl_2544 3.914e-44 168.0 COG0045@1|root,COG1042@1|root,COG1670@1|root,COG0045@2|Bacteria,COG1042@2|Bacteria,COG1670@2|Bacteria,2GKN1@201174|Actinobacteria,4CRR1@84995|Rubrobacteria 84995|Rubrobacteria C CoA-binding - - - ko:K09181 - - - - ko00000 - - - ATP-grasp_5,Acetyltransf_3,CoA_binding_2,Succ_CoA_lig HKD3_k127_6628398_4 1499967.BAYZ01000103_gene3780 5.114e-37 164.0 COG0457@1|root,COG0457@2|Bacteria 1499967.BAYZ01000103_gene3780|- S peptidyl-tyrosine sulfation - - - - - - - - - - - - - HKD3_k127_6628398_3 1267535.KB906767_gene4940 2.382e-41 158.0 COG2318@1|root,COG2318@2|Bacteria,3Y579@57723|Acidobacteria,2JJPN@204432|Acidobacteriia 204432|Acidobacteriia S DinB family - - - - - - - - - - - - DinB HKD3_k127_6628398_5 1267533.KB906733_gene2807 2.289e-06 61.0 28K04@1|root,2Z9Q3@2|Bacteria,3Y344@57723|Acidobacteria,2JHZP@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - HKD3_k127_6628398_0 234267.Acid_0926 8.317e-224 705.0 COG1473@1|root,COG1473@2|Bacteria 2|Bacteria S N-acetyldiaminopimelate deacetylase activity - - - ko:K12941 - - - - ko00000,ko01002 - - - M20_dimer,Peptidase_M20 HKD3_k127_6684874_1 1071679.BG57_06720 4.2e-50 192.0 COG0628@1|root,COG0628@2|Bacteria,1MVX7@1224|Proteobacteria,2VIIX@28216|Betaproteobacteria,1K383@119060|Burkholderiaceae 28216|Betaproteobacteria S AI-2E family transporter - - - - - - - - - - - - AI-2E_transport HKD3_k127_6684874_3 391625.PPSIR1_01377 2.308e-07 58.0 COG1882@1|root,COG1882@2|Bacteria,1MWBF@1224|Proteobacteria,42M5J@68525|delta/epsilon subdivisions,2WJAK@28221|Deltaproteobacteria 28221|Deltaproteobacteria C formate C-acetyltransferase glycine radical - - 2.3.1.54 ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 - R00212,R06987 RC00004,RC01181,RC02742,RC02833 ko00000,ko00001,ko01000 - - - Gly_radical,PFL-like HKD3_k127_6684874_2 243231.GSU2101 4.291e-34 138.0 COG1882@1|root,COG1882@2|Bacteria,1MWBF@1224|Proteobacteria,42M5J@68525|delta/epsilon subdivisions,2WJAK@28221|Deltaproteobacteria,43TNZ@69541|Desulfuromonadales 28221|Deltaproteobacteria C Glycine radical - - 2.3.1.54,4.1.99.11,4.3.99.4 ko:K00656,ko:K07540,ko:K20038 ko00620,ko00623,ko00640,ko00650,ko01100,ko01120,ko01220,map00620,map00623,map00640,map00650,map01100,map01120,map01220 M00418 R00212,R05598,R06987 RC00004,RC01181,RC01433,RC01434,RC02742,RC02833 ko00000,ko00001,ko00002,ko01000 - - - Gly_radical,PFL-like HKD3_k127_6684874_4 309807.SRU_0734 0.0001065 51.0 2DMHT@1|root,32RN3@2|Bacteria,4NPZK@976|Bacteroidetes 976|Bacteroidetes S PEGA domain - - - - - - - - - - - - PEGA HKD3_k127_6684874_5 864051.BurJ1DRAFT_3207 0.000107 49.0 COG0399@1|root,COG0399@2|Bacteria,1MUMJ@1224|Proteobacteria,2VQRJ@28216|Betaproteobacteria 28216|Betaproteobacteria M Putative transposase - - - - - - - - - - - - Y2_Tnp,Zn_Tnp_IS91 HKD3_k127_6684874_0 243231.GSU2101 1.478e-167 531.0 COG1882@1|root,COG1882@2|Bacteria,1MWBF@1224|Proteobacteria,42M5J@68525|delta/epsilon subdivisions,2WJAK@28221|Deltaproteobacteria,43TNZ@69541|Desulfuromonadales 28221|Deltaproteobacteria C Glycine radical - - 2.3.1.54,4.1.99.11,4.3.99.4 ko:K00656,ko:K07540,ko:K20038 ko00620,ko00623,ko00640,ko00650,ko01100,ko01120,ko01220,map00620,map00623,map00640,map00650,map01100,map01120,map01220 M00418 R00212,R05598,R06987 RC00004,RC01181,RC01433,RC01434,RC02742,RC02833 ko00000,ko00001,ko00002,ko01000 - - - Gly_radical,PFL-like HKD3_k127_6760659_2 1267534.KB906755_gene4541 6.04e-35 151.0 2DBAV@1|root,2Z84I@2|Bacteria,3Y2PF@57723|Acidobacteria,2JIIF@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - HKD3_k127_6760659_0 596152.DesU5LDRAFT_3017 2.204e-124 410.0 COG1373@1|root,COG1373@2|Bacteria,1MWBT@1224|Proteobacteria,42NJU@68525|delta/epsilon subdivisions,2WJP4@28221|Deltaproteobacteria,2MGF1@213115|Desulfovibrionales 28221|Deltaproteobacteria S Domain of unknown function (DUF4143) - - - ko:K07133 - - - - ko00000 - - - AAA_14,DUF4143 HKD3_k127_6760659_1 278957.ABEA03000135_gene1751 4.913e-58 206.0 COG0823@1|root,COG0823@2|Bacteria 2|Bacteria U Involved in the tonB-independent uptake of proteins - - - - - - - - - - - - PD40 HKD3_k127_6800072_1 518766.Rmar_1781 2.058e-68 242.0 COG0842@1|root,COG0842@2|Bacteria,4NDU0@976|Bacteroidetes 976|Bacteroidetes V transport, permease protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 HKD3_k127_6800072_0 1191523.MROS_0938 1.351e-95 337.0 COG0842@1|root,COG0842@2|Bacteria 2|Bacteria V Transport permease protein ybhR GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006855,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0015562,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0033554,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0071944 - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 HKD3_k127_6800072_2 627192.SLG_07210 1.375e-09 70.0 COG0457@1|root,COG0457@2|Bacteria,1R20U@1224|Proteobacteria,2U3F2@28211|Alphaproteobacteria,2K34W@204457|Sphingomonadales 204457|Sphingomonadales S Tetratricopeptide repeat - - - - - - - - - - - - TPR_16 HKD3_k127_6854548_1 1183438.GKIL_2463 6.454e-145 465.0 COG0379@1|root,COG0379@2|Bacteria,1G17Q@1117|Cyanobacteria 1117|Cyanobacteria H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate nadA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 ko:K03517 ko00760,ko01100,map00760,map01100 M00115 R04292 RC01119 ko00000,ko00001,ko00002,ko01000 - - - NadA HKD3_k127_6854548_2 1894.JOER01000010_gene2320 5.396e-28 126.0 COG1597@1|root,COG1597@2|Bacteria,2GK3P@201174|Actinobacteria 201174|Actinobacteria I Diacylglycerol kinase dagK GO:0003674,GO:0003824,GO:0004143,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006643,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.107 ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 - R02240 RC00002,RC00017 ko00000,ko00001,ko01000 - - - DAGK_cat HKD3_k127_6854548_3 411473.RUMCAL_01251 3.979e-06 59.0 COG0727@1|root,COG0727@2|Bacteria,1TSB6@1239|Firmicutes,24AQ9@186801|Clostridia,3WIXE@541000|Ruminococcaceae 186801|Clostridia S N-methylation of lysine residues in flagellin K00599 - - - ko:K18475 - - - - ko00000,ko01000,ko02035 - - - CxxCxxCC HKD3_k127_6854548_0 234267.Acid_0778 1.33e-186 592.0 COG2379@1|root,COG2379@2|Bacteria,3Y2XC@57723|Acidobacteria 57723|Acidobacteria G MOFRL family - - 2.7.1.165 ko:K11529 ko00030,ko00260,ko00561,ko00630,ko00680,ko01100,ko01120,ko01130,ko01200,map00030,map00260,map00561,map00630,map00680,map01100,map01120,map01130,map01200 M00346 R08572 RC00002,RC00428 ko00000,ko00001,ko00002,ko01000 - - - DUF4147,MOFRL HKD3_k127_6867333_19 484770.UFO1_3005 0.0002345 49.0 COG2706@1|root,COG2706@2|Bacteria,1TQ3J@1239|Firmicutes,4H65I@909932|Negativicutes 909932|Negativicutes G Lactonase, 7-bladed beta-propeller - - - - - - - - - - - - Lactonase HKD3_k127_6867333_10 1110502.TMO_1674 1.802e-76 268.0 COG2951@1|root,COG2951@2|Bacteria,1MUZ3@1224|Proteobacteria,2TRP0@28211|Alphaproteobacteria,2JPCF@204441|Rhodospirillales 204441|Rhodospirillales M Lytic murein transglycosylase mltB - - ko:K08305 - - - - ko00000,ko01000,ko01011 - GH103 - PG_binding_1,SLT_2 HKD3_k127_6867333_1 1191523.MROS_0031 1.898e-270 842.0 COG4146@1|root,COG4146@2|Bacteria 2|Bacteria S symporter activity - - - ko:K03307 - - - - ko00000 2.A.21 - - SSF HKD3_k127_6867333_17 1521187.JPIM01000044_gene3296 1.439e-29 121.0 COG0640@1|root,COG0640@2|Bacteria,2GAXH@200795|Chloroflexi,377I1@32061|Chloroflexia 32061|Chloroflexia K helix_turn_helix, Arsenical Resistance Operon Repressor - - - - - - - - - - - - HTH_20 HKD3_k127_6867333_12 671143.DAMO_2827 4.775e-57 209.0 COG3260@1|root,COG3260@2|Bacteria,2NRM4@2323|unclassified Bacteria 2|Bacteria C NADH ubiquinone oxidoreductase, 20 Kd subunit hycG - - - - - - - - - - - Oxidored_q6 HKD3_k127_6867333_2 671143.DAMO_2828 4.536e-163 544.0 COG0651@1|root,COG0651@2|Bacteria,2NR9Z@2323|unclassified Bacteria 2|Bacteria CP Proton-conducting membrane transporter hyfB GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - ko:K12137,ko:K15828 - - - - ko00000,ko01000 - - iB21_1397.B21_02538,iECBD_1354.ECBD_1002,iECB_1328.ECB_02573,iECD_1391.ECD_02573,iECED1_1282.ECED1_3174,iECO111_1330.ECO111_3443,iECO26_1355.ECO26_3788,iECP_1309.ECP_2686,iEKO11_1354.EKO11_1252,iEcHS_1320.EcHS_A2859,iLF82_1304.LF82_1065,iNRG857_1313.NRG857_13330 Proton_antipo_M,Proton_antipo_N HKD3_k127_6867333_9 330214.NIDE4264 1.194e-96 325.0 COG0650@1|root,COG0650@2|Bacteria,3J0RR@40117|Nitrospirae 40117|Nitrospirae C NADH dehydrogenase - - - - - - - - - - - - NADHdh HKD3_k127_6867333_15 671143.DAMO_2830 5.171e-40 156.0 COG4237@1|root,COG4237@2|Bacteria 2|Bacteria C Hydrogenase 4 membrane hyfE GO:0008150,GO:0040007 - ko:K12140 - - - - ko00000,ko01000 - - - - HKD3_k127_6867333_6 671143.DAMO_2831 1.18e-109 371.0 COG0651@1|root,COG0651@2|Bacteria,2NS4P@2323|unclassified Bacteria 2|Bacteria CP Proton-conducting membrane transporter hyfF GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0033554,GO:0044425,GO:0044464,GO:0050896,GO:0051716,GO:0071944 - ko:K12141 - - - - ko00000,ko01000 - - iECIAI39_1322.ECIAI39_2625,iZ_1308.Z3746 Proton_antipo_M,Proton_antipo_N HKD3_k127_6867333_3 671143.DAMO_2832 1.098e-152 519.0 COG3261@1|root,COG3262@1|root,COG3261@2|Bacteria,COG3262@2|Bacteria 2|Bacteria C NADH dehydrogenase (ubiquinone) activity hycE - - ko:K14089 - - - - ko00000 - - - Complex1_30kDa,Complex1_49kDa,NiFeSe_Hases HKD3_k127_6867333_14 744872.Spica_1828 1.381e-42 164.0 COG0317@1|root,COG0317@2|Bacteria,2J5Q1@203691|Spirochaetes 203691|Spirochaetes KT Metal dependent phosphohydrolases with conserved 'HD' motif. - - 2.7.6.5,3.1.7.2 ko:K01139 ko00230,map00230 - R00336,R00429 RC00002,RC00078 ko00000,ko00001,ko01000,ko03009 - - - - HKD3_k127_6867333_16 204669.Acid345_2480 1.434e-35 139.0 COG0662@1|root,COG0662@2|Bacteria,3Y8AX@57723|Acidobacteria 57723|Acidobacteria G Cupin 2, conserved barrel domain protein - - - - - - - - - - - - - HKD3_k127_6867333_4 204669.Acid345_3656 2.878e-135 443.0 COG3191@1|root,COG3191@2|Bacteria 2|Bacteria EQ aminopeptidase activity dmpA - 3.4.11.19 ko:K01266 - - - - ko00000,ko01000,ko01002 - - - Peptidase_S58 HKD3_k127_6867333_8 1254432.SCE1572_34120 8.565e-103 363.0 COG2234@1|root,COG2234@2|Bacteria,1R56X@1224|Proteobacteria,43823@68525|delta/epsilon subdivisions,2X3C5@28221|Deltaproteobacteria,2YVD0@29|Myxococcales 28221|Deltaproteobacteria S Peptidase family M28 - - - - - - - - - - - - Peptidase_M28 HKD3_k127_6867333_0 234267.Acid_5900 3.478e-298 953.0 COG4447@1|root,COG4447@2|Bacteria 2|Bacteria S cellulose binding - - - - - - - - - - - - Sortilin-Vps10 HKD3_k127_6867333_13 204669.Acid345_4177 1.522e-55 203.0 COG0558@1|root,COG0558@2|Bacteria,3Y4PW@57723|Acidobacteria,2JJI0@204432|Acidobacteriia 204432|Acidobacteriia I CDP-alcohol phosphatidyltransferase - - - - - - - - - - - - CDP-OH_P_transf HKD3_k127_6867333_18 234267.Acid_3570 6.037e-18 94.0 COG2246@1|root,COG2246@2|Bacteria,3Y5HC@57723|Acidobacteria 57723|Acidobacteria S GtrA-like protein - - - - - - - - - - - - GtrA HKD3_k127_6867333_11 1232410.KI421413_gene756 4.513e-67 237.0 COG1272@1|root,COG1272@2|Bacteria,1PGRH@1224|Proteobacteria,42SPM@68525|delta/epsilon subdivisions,2WMYY@28221|Deltaproteobacteria,43UPP@69541|Desulfuromonadales 28221|Deltaproteobacteria S Haemolysin-III related - - - ko:K11068 - - - - ko00000,ko02042 - - - HlyIII HKD3_k127_6867333_7 309807.SRU_0737 1.108e-105 357.0 COG0432@1|root,COG0432@2|Bacteria,4PE9F@976|Bacteroidetes,1FIKK@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes S Pfam Uncharacterised protein family UPF0047 - - - - - - - - - - - - - HKD3_k127_6867333_5 1144275.COCOR_00825 1.751e-129 417.0 COG0174@1|root,COG0174@2|Bacteria,1MU6V@1224|Proteobacteria,43BWY@68525|delta/epsilon subdivisions,2X77Q@28221|Deltaproteobacteria 28221|Deltaproteobacteria H Glutamine synthetase glnA - 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 - R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 - - - Gln-synt_C,Gln-synt_N HKD3_k127_6977431_2 1047013.AQSP01000138_gene1041 6.282e-39 168.0 COG1452@1|root,COG1452@2|Bacteria,2NPN2@2323|unclassified Bacteria 2|Bacteria M involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane lptD GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0006810,GO:0008150,GO:0008643,GO:0008645,GO:0009279,GO:0015267,GO:0015288,GO:0015749,GO:0015750,GO:0015751,GO:0015757,GO:0016020,GO:0019867,GO:0022803,GO:0022829,GO:0022857,GO:0030312,GO:0030313,GO:0031975,GO:0034219,GO:0044462,GO:0044464,GO:0046323,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:1904659 - ko:K04744,ko:K09774,ko:K22110 - - - - ko00000,ko02000 1.B.35.1,1.B.35.2,1.B.42.1 - iAF987.Gmet_2474,iECO111_1330.ECO111_4695,iECSF_1327.ECSF_3725,iEcSMS35_1347.EcSMS35_4260 KdgM,OstA,OstA_2,OstA_C HKD3_k127_6977431_1 1242864.D187_005833 6.611e-75 268.0 COG0285@1|root,COG0285@2|Bacteria,1MVCH@1224|Proteobacteria,42N08@68525|delta/epsilon subdivisions,2WIW9@28221|Deltaproteobacteria,2YUTG@29|Myxococcales 28221|Deltaproteobacteria H Belongs to the folylpolyglutamate synthase family folC - 6.3.2.12,6.3.2.17 ko:K11754 ko00790,ko01100,map00790,map01100 M00126,M00841 R00942,R02237,R04241 RC00064,RC00090,RC00162 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_2475 Mur_ligase_C,Mur_ligase_M HKD3_k127_6977431_0 443144.GM21_0896 6.774e-107 353.0 COG0777@1|root,COG0777@2|Bacteria,1MW8G@1224|Proteobacteria,42MAB@68525|delta/epsilon subdivisions,2WP9B@28221|Deltaproteobacteria,43U3E@69541|Desulfuromonadales 28221|Deltaproteobacteria I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA accD - 2.1.3.15,6.4.1.2 ko:K01963 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04386 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 - - - Carboxyl_trans HKD3_k127_720431_4 1379270.AUXF01000003_gene3552 2.451e-29 123.0 COG3055@1|root,COG3055@2|Bacteria 2|Bacteria G Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - - - - - - - - - - Collagen_bind_2,DUF5060,Kelch_1,Kelch_6,Malectin,NPCBM HKD3_k127_720431_1 324602.Caur_2587 3.239e-117 389.0 COG2008@1|root,COG2008@2|Bacteria,2G5XG@200795|Chloroflexi,374UV@32061|Chloroflexia 32061|Chloroflexia E aromatic amino acid beta-eliminating lyase threonine aldolase - - 4.1.2.48 ko:K01620 ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230 - R00751,R06171 RC00312,RC00372 ko00000,ko00001,ko01000 - - - Beta_elim_lyase HKD3_k127_720431_3 1499967.BAYZ01000009_gene5266 1.033e-44 169.0 COG1335@1|root,COG1335@2|Bacteria 2|Bacteria Q hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides yddQ - 3.5.1.19 ko:K08281 ko00760,ko01100,map00760,map01100 - R01268 RC00100 ko00000,ko00001,ko01000 - - - Isochorismatase HKD3_k127_720431_0 243231.GSU0830 0.0 1184.0 COG3696@1|root,COG3696@2|Bacteria,1NUIV@1224|Proteobacteria,42M0A@68525|delta/epsilon subdivisions,2WIQY@28221|Deltaproteobacteria 28221|Deltaproteobacteria P Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - ko:K07787,ko:K15726 ko02020,map02020 - - - ko00000,ko00001,ko02000 2.A.6.1.2,2.A.6.1.4 - - ACR_tran HKD3_k127_720431_2 404380.Gbem_1940 2.466e-47 186.0 COG0845@1|root,COG0845@2|Bacteria,1MX8W@1224|Proteobacteria,42SYF@68525|delta/epsilon subdivisions,2WPNQ@28221|Deltaproteobacteria 28221|Deltaproteobacteria M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K15727 - - - - ko00000,ko02000 8.A.1.2.1 - - HlyD_D23 HKD3_k127_720431_5 859657.RPSI07_mp0459 4.923e-20 103.0 COG1538@1|root,COG1538@2|Bacteria,1R6S1@1224|Proteobacteria,2VMHP@28216|Betaproteobacteria,1K39N@119060|Burkholderiaceae 28216|Betaproteobacteria MU membrane cusC - - ko:K15725 - - - - ko00000,ko02000 1.B.17.2.2 - - OEP HKD3_k127_7242012_20 880073.Calab_1405 7.102e-15 77.0 COG1373@1|root,COG1373@2|Bacteria 2|Bacteria V ATPase (AAA superfamily - - - ko:K07133 - - - - ko00000 - - - AAA_14,DUF4143 HKD3_k127_7242012_18 1122221.JHVI01000026_gene1308 1.22e-22 100.0 2DNRM@1|root,32YT2@2|Bacteria 2|Bacteria S Protein of unknown function (DUF2442) - - - - - - - - - - - - DUF2442 HKD3_k127_7242012_21 1411123.JQNH01000001_gene2699 1.004e-12 77.0 2C5EY@1|root,32YQJ@2|Bacteria,1N8K7@1224|Proteobacteria,2UGJ4@28211|Alphaproteobacteria 28211|Alphaproteobacteria S Domain of unknown function (DUF4160) - - - - - - - - - - - - DUF4160 HKD3_k127_7242012_0 234267.Acid_4393 2.872e-158 531.0 COG0515@1|root,COG0515@2|Bacteria 234267.Acid_4393|- KLT protein kinase activity - - - - - - - - - - - - - HKD3_k127_7242012_19 243275.TDE_0878 1.465e-15 78.0 COG5450@1|root,COG5450@2|Bacteria,2J8UM@203691|Spirochaetes 203691|Spirochaetes K Bacterial antitoxin of type II TA system, VapB - - - - - - - - - - - - VapB_antitoxin HKD3_k127_7242012_24 113355.CM001775_gene1018 4.035e-07 58.0 COG1487@1|root,COG1487@2|Bacteria,1G736@1117|Cyanobacteria 1117|Cyanobacteria S PIN domain - - - - - - - - - - - - PIN HKD3_k127_7242012_23 240015.ACP_0455 6.321e-11 67.0 COG1314@1|root,COG1314@2|Bacteria,3Y56S@57723|Acidobacteria,2JJVA@204432|Acidobacteriia 204432|Acidobacteriia U Preprotein translocase SecG subunit - - - ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 - - SecG HKD3_k127_7242012_5 370438.PTH_2721 1.024e-84 287.0 COG0149@1|root,COG0149@2|Bacteria,1TP2F@1239|Firmicutes,248JN@186801|Clostridia,260CH@186807|Peptococcaceae 186801|Clostridia G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) tpiA - 5.3.1.1 ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003 R01015 RC00423 ko00000,ko00001,ko00002,ko01000,ko04147 - - - TIM HKD3_k127_7242012_2 234267.Acid_4421 6.699e-144 467.0 COG0126@1|root,COG0126@2|Bacteria,3Y2T7@57723|Acidobacteria 57723|Acidobacteria F Belongs to the phosphoglycerate kinase family pgk - 2.7.2.3 ko:K00927 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01512 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000,ko04147 - - - PGK HKD3_k127_7242012_1 1120985.AUMI01000014_gene898 1.638e-144 468.0 COG0057@1|root,COG0057@2|Bacteria,1TNYU@1239|Firmicutes,4H298@909932|Negativicutes 909932|Negativicutes C Belongs to the glyceraldehyde-3-phosphate dehydrogenase family gap - 1.2.1.12 ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01061 RC00149 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 - - - Gp_dh_C,Gp_dh_N HKD3_k127_7242012_4 671143.DAMO_1644 1.269e-94 328.0 COG1519@1|root,COG1519@2|Bacteria,2NP5A@2323|unclassified Bacteria 2|Bacteria M 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) kdtA - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 ko:K02527 ko00540,ko01100,map00540,map01100 M00060,M00080 R04658,R05074,R09763 RC00009,RC00077,RC00247 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT30 - Glycos_transf_1,Glycos_transf_N HKD3_k127_7242012_14 269799.Gmet_2347 7.908e-40 170.0 COG1663@1|root,COG1663@2|Bacteria,1MU8G@1224|Proteobacteria,42PA2@68525|delta/epsilon subdivisions,2WNJ4@28221|Deltaproteobacteria,43SX0@69541|Desulfuromonadales 28221|Deltaproteobacteria F Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) lpxK - 2.7.1.130 ko:K00912 ko00540,ko01100,map00540,map01100 M00060 R04657 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko01005 - - - LpxK HKD3_k127_7242012_11 1047013.AQSP01000135_gene1573 3.391e-48 196.0 COG1560@1|root,COG1560@2|Bacteria,2NPD7@2323|unclassified Bacteria 2|Bacteria M Lipid A biosynthesis htrB - 2.3.1.241 ko:K02517 ko00540,ko01100,map00540,map01100 M00060 R05146 RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Lip_A_acyltrans HKD3_k127_7242012_8 671143.DAMO_1641 1.427e-56 221.0 COG0241@1|root,COG0859@1|root,COG0241@2|Bacteria,COG0859@2|Bacteria,2NPK4@2323|unclassified Bacteria 2|Bacteria E D,D-heptose 1,7-bisphosphate phosphatase rfaF - 2.7.1.167,2.7.7.70,3.1.3.82,3.1.3.83,5.3.1.28 ko:K02841,ko:K02843,ko:K02849,ko:K03271,ko:K03272,ko:K03273 ko00540,ko01100,map00540,map01100 M00064,M00080 R05644,R05645,R05646,R05647,R09768,R09769,R09771 RC00002,RC00017,RC00078,RC00434 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT9 - Glyco_transf_9,Hydrolase_like HKD3_k127_7242012_12 243231.GSU2084 7.138e-45 174.0 COG0241@1|root,COG0241@2|Bacteria,1RDGR@1224|Proteobacteria,42SCB@68525|delta/epsilon subdivisions,2WPEA@28221|Deltaproteobacteria,43UQ7@69541|Desulfuromonadales 28221|Deltaproteobacteria E TIGRFAM D,D-heptose 1,7-bisphosphate phosphatase gmhB - 3.1.3.82,3.1.3.83 ko:K03273 ko00540,ko01100,map00540,map01100 M00064 R05647,R09771 RC00017 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Hydrolase_like HKD3_k127_7242012_10 290397.Adeh_2610 3.654e-50 189.0 COG0615@1|root,COG0615@2|Bacteria,1REW3@1224|Proteobacteria,42SGQ@68525|delta/epsilon subdivisions,2WPTP@28221|Deltaproteobacteria 28221|Deltaproteobacteria H Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose rfaE - - - - - - - - - - - CTP_transf_like HKD3_k127_7242012_9 401053.AciPR4_3802 2.13e-50 192.0 COG0859@1|root,COG0859@2|Bacteria,3Y3EJ@57723|Acidobacteria,2JIYJ@204432|Acidobacteriia 204432|Acidobacteriia M PFAM glycosyl transferase family 9 - - - ko:K02841 ko00540,ko01100,map00540,map01100 M00080 - - ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT9 - Glyco_transf_9 HKD3_k127_7242012_16 204669.Acid345_4722 1.318e-28 121.0 COG2020@1|root,COG2020@2|Bacteria,3Y4P4@57723|Acidobacteria,2JJJZ@204432|Acidobacteriia 204432|Acidobacteriia O Phospholipid methyltransferase - - - - - - - - - - - - PEMT HKD3_k127_7242012_15 404589.Anae109_2451 1.031e-39 161.0 COG2812@1|root,COG2812@2|Bacteria,1QVB3@1224|Proteobacteria,42SBC@68525|delta/epsilon subdivisions,2WPCK@28221|Deltaproteobacteria,2YVD8@29|Myxococcales 28221|Deltaproteobacteria L DNA polymerase III holB - 2.7.7.7 ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_delta2,DNApol3-delta_C HKD3_k127_7242012_7 1125863.JAFN01000001_gene297 1.392e-56 206.0 COG1774@1|root,COG1774@2|Bacteria,1MZBX@1224|Proteobacteria,42NE3@68525|delta/epsilon subdivisions,2WK98@28221|Deltaproteobacteria 28221|Deltaproteobacteria D PFAM PSP1 domain protein - - - - - - - - - - - - PSP1 HKD3_k127_7242012_6 933262.AXAM01000094_gene2197 3.032e-72 265.0 COG1995@1|root,COG1995@2|Bacteria,1MX5W@1224|Proteobacteria,42NJJ@68525|delta/epsilon subdivisions,2WJGI@28221|Deltaproteobacteria,2MHYF@213118|Desulfobacterales 28221|Deltaproteobacteria H Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) pdxA - 1.1.1.262,1.1.1.408,1.1.1.409 ko:K00097,ko:K22024 ko00750,ko01100,map00750,map01100 M00124 R05681,R05837,R07406 RC00089,RC00675,RC01475 ko00000,ko00001,ko00002,ko01000 - - - PdxA HKD3_k127_7242012_13 246194.CHY_0290 5.39e-44 178.0 COG0691@1|root,COG0691@2|Bacteria,1V3IJ@1239|Firmicutes,24HD6@186801|Clostridia,42GC6@68295|Thermoanaerobacterales 186801|Clostridia J Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene smpB - - ko:K03664 - - - - ko00000 - - - SmpB HKD3_k127_7242012_22 224325.AF_0303 2.144e-12 75.0 arCOG07506@1|root,arCOG07506@2157|Archaea,2Y04Z@28890|Euryarchaeota 28890|Euryarchaeota - - - - - - - - - - - - - - - HKD3_k127_7242012_3 326427.Cagg_1968 2.261e-143 466.0 COG0399@1|root,COG0399@2|Bacteria,2G7J4@200795|Chloroflexi,3772V@32061|Chloroflexia 32061|Chloroflexia E aromatic amino acid beta-eliminating lyase threonine aldolase - - - - - - - - - - - - DegT_DnrJ_EryC1 HKD3_k127_7242012_17 401526.TcarDRAFT_0718 3.415e-23 114.0 COG1301@1|root,COG1301@2|Bacteria,1TPME@1239|Firmicutes,4H2D2@909932|Negativicutes 909932|Negativicutes C Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family gltP - - ko:K11102 - - - - ko00000,ko02000 2.A.23.1.1,2.A.23.1.2 - - SDF HKD3_k127_7247937_0 404589.Anae109_3100 1.988e-231 727.0 COG0280@1|root,COG0857@1|root,COG0280@2|Bacteria,COG0857@2|Bacteria,1QTS5@1224|Proteobacteria,42MPY@68525|delta/epsilon subdivisions,2WJ2V@28221|Deltaproteobacteria 28221|Deltaproteobacteria C belongs to the CobB CobQ family pta - 2.3.1.8 ko:K00625,ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 M00357,M00579 R00230,R00921 RC00004,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_1035 AAA_26,DRTGG,PTA_PTB HKD3_k127_7247937_1 1321778.HMPREF1982_04499 7.804e-145 468.0 COG0624@1|root,COG0624@2|Bacteria,1TR99@1239|Firmicutes,248DC@186801|Clostridia,267KB@186813|unclassified Clostridiales 186801|Clostridia E Peptidase dimerisation domain dapE - - - - - - - - - - - M20_dimer,Peptidase_M20 HKD3_k127_7257578_2 1121859.KB890755_gene1259 1.354e-06 59.0 COG4775@1|root,COG4775@2|Bacteria,4NHNW@976|Bacteroidetes,47QHX@768503|Cytophagia 976|Bacteroidetes M Surface antigen - - - - - - - - - - - - Bac_surface_Ag HKD3_k127_7257578_0 404589.Anae109_0243 7.174e-150 487.0 COG2010@1|root,COG2010@2|Bacteria,1RJJ2@1224|Proteobacteria,42SCM@68525|delta/epsilon subdivisions,2WPS4@28221|Deltaproteobacteria 28221|Deltaproteobacteria C Cytochrome c pcmF - - - - - - - - - - - Cytochrom_C HKD3_k127_7257578_1 290397.Adeh_2404 8.485e-65 227.0 COG1290@1|root,COG1290@2|Bacteria,1MV97@1224|Proteobacteria,42MD6@68525|delta/epsilon subdivisions,2WMNX@28221|Deltaproteobacteria,2Z31Y@29|Myxococcales 28221|Deltaproteobacteria C Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - - - - - - - - - - Cytochrom_B_C,Cytochrome_B HKD3_k127_7258988_0 1396141.BATP01000003_gene5228 8.248e-148 474.0 COG0451@1|root,COG0451@2|Bacteria,46XPQ@74201|Verrucomicrobia,2IWC3@203494|Verrucomicrobiae 203494|Verrucomicrobiae GM ADP-glyceromanno-heptose 6-epimerase activity - - - - - - - - - - - - - HKD3_k127_7259558_0 234267.Acid_7693 3.14e-262 821.0 COG0674@1|root,COG1014@1|root,COG0674@2|Bacteria,COG1014@2|Bacteria,3Y3NX@57723|Acidobacteria 57723|Acidobacteria C Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg - - 1.2.7.11,1.2.7.3 ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - POR,POR_N HKD3_k127_7259558_2 1267534.KB906754_gene3783 6.233e-157 501.0 COG1013@1|root,COG1013@2|Bacteria,3Y3NE@57723|Acidobacteria,2JIEM@204432|Acidobacteriia 204432|Acidobacteriia C Pyruvate ferredoxin oxidoreductase beta subunit C terminal - - 1.2.7.11,1.2.7.3 ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - PFO_beta_C,TPP_enzyme_C HKD3_k127_7259558_7 1232410.KI421424_gene1665 3.32e-53 192.0 COG0105@1|root,COG0105@2|Bacteria,1R9ZA@1224|Proteobacteria,42RIR@68525|delta/epsilon subdivisions,2WP3R@28221|Deltaproteobacteria,43SGP@69541|Desulfuromonadales 28221|Deltaproteobacteria F NDK ndk GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 ko:K00940 ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016 M00049,M00050,M00052,M00053 R00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895 RC00002 ko00000,ko00001,ko00002,ko01000,ko04131 - - - NDK HKD3_k127_7259558_3 269799.Gmet_1913 9.977e-134 438.0 COG0124@1|root,COG0124@2|Bacteria,1MV2K@1224|Proteobacteria,42MG0@68525|delta/epsilon subdivisions,2WJE1@28221|Deltaproteobacteria,43TYY@69541|Desulfuromonadales 28221|Deltaproteobacteria J PFAM tRNA synthetase, class II (G, H, P and S) hisS - 6.1.1.21 ko:K01892 ko00970,map00970 M00359,M00360 R03655 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - HGTP_anticodon,tRNA-synt_His HKD3_k127_7259558_1 1047013.AQSP01000138_gene1038 8.37e-190 609.0 COG0173@1|root,COG0173@2|Bacteria,2NNP3@2323|unclassified Bacteria 2|Bacteria J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) aspS GO:0003674,GO:0003824,GO:0004812,GO:0004815,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006422,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.12 ko:K01876 ko00970,map00970 M00359,M00360 R05577 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - iJN678.aspS,iSFV_1184.SFV_1868 GAD,tRNA-synt_2,tRNA_anti-codon HKD3_k127_7259558_4 204669.Acid345_3538 1.734e-111 369.0 COG1702@1|root,COG1702@2|Bacteria,3Y3RM@57723|Acidobacteria,2JI4V@204432|Acidobacteriia 204432|Acidobacteriia T PhoH-like protein - - - ko:K06217 - - - - ko00000 - - - PhoH HKD3_k127_7259558_8 404589.Anae109_2711 3.361e-18 100.0 COG0319@1|root,COG0319@2|Bacteria,1MZ67@1224|Proteobacteria,42TCJ@68525|delta/epsilon subdivisions,2X5PW@28221|Deltaproteobacteria,2Z2ZQ@29|Myxococcales 28221|Deltaproteobacteria J Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA ybeY - - ko:K07042 - - - - ko00000,ko03009 - - - UPF0054 HKD3_k127_7259558_6 234267.Acid_7713 1.008e-61 235.0 COG1253@1|root,COG1253@2|Bacteria,3Y3MC@57723|Acidobacteria 57723|Acidobacteria S PFAM CBS domain - - - - - - - - - - - - CBS,CorC_HlyC,DUF21 HKD3_k127_7259558_5 243231.GSU2226 1.506e-83 292.0 COG1159@1|root,COG1159@2|Bacteria,1MUKT@1224|Proteobacteria,42MUR@68525|delta/epsilon subdivisions,2WJC8@28221|Deltaproteobacteria,43TV2@69541|Desulfuromonadales 28221|Deltaproteobacteria S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism era - - ko:K03595 - - - - ko00000,ko03009,ko03029 - - - KH_2,MMR_HSR1 HKD3_k127_7261189_13 767031.HMPREF9137_0316 3.017e-09 59.0 COG1624@1|root,COG1624@2|Bacteria,4NG3Z@976|Bacteroidetes,2FN6K@200643|Bacteroidia 976|Bacteroidetes S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria dacA - - - - - - - - - - - DisA_N HKD3_k127_7261189_15 653733.Selin_2327 1.187e-07 63.0 COG4856@1|root,COG4856@2|Bacteria 2|Bacteria O YbbR-like protein ybbR GO:0008150,GO:0031279,GO:0031281,GO:0043085,GO:0044093,GO:0045761,GO:0045762,GO:0050790,GO:0051339,GO:0051349,GO:0065007,GO:0065009 - - - - - - - - - - YbbR HKD3_k127_7261189_2 682795.AciX8_1037 2.433e-116 395.0 COG1109@1|root,COG1109@2|Bacteria,3Y36F@57723|Acidobacteria,2JHU9@204432|Acidobacteriia 204432|Acidobacteriia G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate glmM - 5.4.2.10 ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 - R02060 RC00408 ko00000,ko00001,ko01000 - - - PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV HKD3_k127_7261189_1 156889.Mmc1_1606 7.233e-131 423.0 COG1830@1|root,COG1830@2|Bacteria,1MWJW@1224|Proteobacteria,2U27K@28211|Alphaproteobacteria 28211|Alphaproteobacteria G COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes - - 2.3.1.245,4.1.2.13 ko:K08321,ko:K11645 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko02024,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map02024 M00001,M00003 R01068,R01070,R01829,R02568 RC00438,RC00439,RC00603,RC00604 ko00000,ko00001,ko00002,ko01000 - - - DeoC HKD3_k127_7261189_10 1122962.AULH01000001_gene1661 1.325e-53 196.0 COG0036@1|root,COG0036@2|Bacteria,1N0HT@1224|Proteobacteria,2UU1Q@28211|Alphaproteobacteria 28211|Alphaproteobacteria G Ribulose-phosphate 3 epimerase family - - - - - - - - - - - - Ribul_P_3_epim HKD3_k127_7261189_0 156889.Mmc1_1605 9.596e-185 623.0 COG3347@1|root,COG4221@1|root,COG3347@2|Bacteria,COG4221@2|Bacteria,1QVWU@1224|Proteobacteria,2TWVU@28211|Alphaproteobacteria 28211|Alphaproteobacteria IQ Short chain dehydrogenase - - - - - - - - - - - - Aldolase_II HKD3_k127_7261189_5 398767.Glov_2526 1.424e-80 275.0 COG0854@1|root,COG0854@2|Bacteria,1MU9W@1224|Proteobacteria,42NZY@68525|delta/epsilon subdivisions,2WJDY@28221|Deltaproteobacteria,43UAY@69541|Desulfuromonadales 28221|Deltaproteobacteria H Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate pdxJ GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 ko:K03474 ko00750,ko01100,map00750,map01100 M00124 R05838 RC01476 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_1885 PdxJ HKD3_k127_7261189_14 1206729.BAFZ01000164_gene5586 1.107e-07 64.0 COG1073@1|root,COG1073@2|Bacteria,2GNB6@201174|Actinobacteria,4FXHV@85025|Nocardiaceae 201174|Actinobacteria S Protein involved in hydrolase activity - - - - - - - - - - - - Hydrolase_4 HKD3_k127_7261189_12 589865.DaAHT2_0817 3.595e-20 104.0 COG0457@1|root,COG0457@2|Bacteria,1N0Q1@1224|Proteobacteria,42TBT@68525|delta/epsilon subdivisions,2WQ96@28221|Deltaproteobacteria,2MK73@213118|Desulfobacterales 28221|Deltaproteobacteria S Tetratricopeptide repeat - - - - - - - - - - - - TPR_1,TPR_16,TPR_2,TPR_6,TPR_8 HKD3_k127_7261189_16 338963.Pcar_0249 7.611e-06 51.0 2DGEV@1|root,2ZVPG@2|Bacteria,1QZ5A@1224|Proteobacteria,43CFW@68525|delta/epsilon subdivisions,2X7QX@28221|Deltaproteobacteria,43ST3@69541|Desulfuromonadales 28221|Deltaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_7261189_3 469383.Cwoe_5009 4.964e-98 333.0 COG1052@1|root,COG1052@2|Bacteria,2I2RK@201174|Actinobacteria,4CPZ9@84995|Rubrobacteria 84995|Rubrobacteria CH D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding - - 1.1.1.26 ko:K00015 ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120 - R00717,R01388 RC00031,RC00042 ko00000,ko00001,ko01000 - - - 2-Hacid_dh,2-Hacid_dh_C HKD3_k127_7261189_8 867845.KI911784_gene502 1.273e-58 214.0 COG0177@1|root,COG0177@2|Bacteria,2G6A1@200795|Chloroflexi,375YQ@32061|Chloroflexia 32061|Chloroflexia L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate nth - 4.2.99.18 ko:K10773 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - HhH-GPD HKD3_k127_7261189_11 1121422.AUMW01000018_gene1901 3.864e-26 116.0 COG0652@1|root,COG0652@2|Bacteria,1TRHW@1239|Firmicutes,247XN@186801|Clostridia,262PU@186807|Peptococcaceae 186801|Clostridia O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides - - 5.2.1.8 ko:K03768 - - - - ko00000,ko01000,ko03110 - - - Pro_isomerase HKD3_k127_7261189_7 671143.DAMO_0383 2.789e-73 258.0 COG1801@1|root,COG1801@2|Bacteria,2NPDU@2323|unclassified Bacteria 2|Bacteria S Protein of unknown function DUF72 - - - - - - - - - - - - DUF72 HKD3_k127_7261189_6 671143.DAMO_3114 6.205e-78 265.0 COG0602@1|root,COG0602@2|Bacteria,2NPEM@2323|unclassified Bacteria 2|Bacteria H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds queE - 1.97.1.4,4.3.99.3 ko:K04068,ko:K10026 ko00790,ko01100,map00790,map01100 - R04710,R10002 RC02989 ko00000,ko00001,ko01000,ko03016 - - iAF987.Gmet_1658 Fer4_14,Radical_SAM HKD3_k127_7261189_4 1125863.JAFN01000001_gene2317 2.781e-88 301.0 COG0603@1|root,COG0603@2|Bacteria,1MU5V@1224|Proteobacteria,42MKZ@68525|delta/epsilon subdivisions,2WING@28221|Deltaproteobacteria 28221|Deltaproteobacteria F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) queC - 6.3.4.20 ko:K06920 ko00790,ko01100,map00790,map01100 - R09978 RC00959 ko00000,ko00001,ko01000,ko03016 - - iAF987.Gmet_3075 QueC HKD3_k127_7261189_9 1382304.JNIL01000001_gene3057 7.95e-58 209.0 COG0013@1|root,COG0013@2|Bacteria,1TSBZ@1239|Firmicutes,4HADV@91061|Bacilli 91061|Bacilli J Alanyl-tRNA synthetase alaS_2 - 6.1.1.7 ko:K01872 ko00970,map00970 M00359,M00360 R03038 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - DHHA1,tRNA-synt_2c,tRNA_SAD HKD3_k127_7264455_0 1283300.ATXB01000001_gene388 1.04e-316 977.0 COG3119@1|root,COG3119@2|Bacteria,1MV92@1224|Proteobacteria,1RPDE@1236|Gammaproteobacteria 1236|Gammaproteobacteria P COG3119 Arylsulfatase A and related enzymes - - 3.1.6.1 ko:K01130 ko00140,ko00600,map00140,map00600 - R03980,R04856 RC00128,RC00231 ko00000,ko00001,ko01000 - - - Sulfatase HKD3_k127_7265010_1 1089547.KB913014_gene4854 6.767e-12 75.0 COG2304@1|root,COG2304@2|Bacteria,4P2FK@976|Bacteroidetes,47UP9@768503|Cytophagia 976|Bacteroidetes S oxidoreductase activity - - - - - - - - - - - - VWA HKD3_k127_7265010_0 1502852.FG94_04531 2.604e-33 134.0 COG2931@1|root,COG2931@2|Bacteria,1PGUW@1224|Proteobacteria,2VY3D@28216|Betaproteobacteria,477AP@75682|Oxalobacteraceae 28216|Betaproteobacteria Q Domain of unknown function (DUF4214) - - - - - - - - - - - - DUF4214 HKD3_k127_7267303_1 1144275.COCOR_03213 6.009e-98 340.0 COG1921@1|root,COG1921@2|Bacteria,1MWXI@1224|Proteobacteria,42MU7@68525|delta/epsilon subdivisions,2WJFQ@28221|Deltaproteobacteria,2YU5T@29|Myxococcales 28221|Deltaproteobacteria H Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis selA GO:0003674,GO:0003824,GO:0004125,GO:0006139,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097056,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901576 2.9.1.1 ko:K01042 ko00450,ko00970,map00450,map00970 - R08219 RC01246 ko00000,ko00001,ko01000 - - - Se-cys_synth_N,SelA HKD3_k127_7267303_10 1121918.ARWE01000001_gene2796 3.03e-07 62.0 COG3266@1|root,COG3266@2|Bacteria,1N3DN@1224|Proteobacteria,42TS8@68525|delta/epsilon subdivisions,2WR5F@28221|Deltaproteobacteria,43SPH@69541|Desulfuromonadales 28221|Deltaproteobacteria S domain, Protein - - - - - - - - - - - - - HKD3_k127_7267303_6 649639.Bcell_0298 6.383e-27 113.0 COG1278@1|root,COG1278@2|Bacteria,1VEE0@1239|Firmicutes,4HNJC@91061|Bacilli,1ZHSU@1386|Bacillus 91061|Bacilli K Cold shock cspA GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - ko:K03704 - - - - ko00000,ko03000 - - - CSD HKD3_k127_7267303_0 1267533.KB906733_gene3416 5.041e-146 485.0 COG0138@1|root,COG0138@2|Bacteria,3Y2QI@57723|Acidobacteria,2JHSU@204432|Acidobacteriia 204432|Acidobacteriia F Bifunctional purine biosynthesis protein PurH purH - 2.1.2.3,3.5.4.10 ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 M00048 R01127,R04560 RC00026,RC00263,RC00456 ko00000,ko00001,ko00002,ko01000,ko04147 - - - AICARFT_IMPCHas,MGS HKD3_k127_7267303_3 1340493.JNIF01000003_gene4163 1.836e-64 226.0 COG1595@1|root,COG1595@2|Bacteria 2|Bacteria K DNA-templated transcription, initiation - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 HKD3_k127_7267303_2 330214.NIDE2553 4.001e-71 267.0 COG2870@1|root,COG2870@2|Bacteria,3J0GT@40117|Nitrospirae 40117|Nitrospirae M Phosphomethylpyrimidine kinase - - 2.7.1.167,2.7.7.70 ko:K03272 ko00540,ko01100,map00540,map01100 M00064 R05644,R05646 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko01005 - - - PfkB HKD3_k127_7267303_4 1047013.AQSP01000138_gene1046 7.032e-46 182.0 COG3307@1|root,COG3307@2|Bacteria,2NQ25@2323|unclassified Bacteria 2|Bacteria M O-Antigen ligase - - - ko:K18814 - - - - ko00000,ko02000 9.B.67.1 - - Wzy_C HKD3_k127_7267303_5 1047013.AQSP01000138_gene1047 6.189e-44 174.0 COG0859@1|root,COG0859@2|Bacteria,2NP5P@2323|unclassified Bacteria 2|Bacteria M Glycosyl transferase, family 9 - - - ko:K02843,ko:K02849 ko00540,ko01100,map00540,map01100 M00080 - - ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT9 - Glyco_transf_9 HKD3_k127_7267303_8 1047013.AQSP01000138_gene1048 2.375e-15 81.0 COG2835@1|root,COG2835@2|Bacteria,2NQ60@2323|unclassified Bacteria 2|Bacteria S Trm112p-like protein ycaR GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.7.1.130 ko:K00912,ko:K09791 ko00540,ko01100,map00540,map01100 M00060 R04657 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Trm112p HKD3_k127_7267881_6 1081640.AGFU01000068_gene3591 1.303e-51 193.0 COG0820@1|root,COG0820@2|Bacteria,1MUYK@1224|Proteobacteria,2TQT3@28211|Alphaproteobacteria,2K0CT@204457|Sphingomonadales 204457|Sphingomonadales J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs rlmN - 2.1.1.192 ko:K06941 - - - - ko00000,ko01000,ko03009 - - - Radical_SAM HKD3_k127_7267881_4 234267.Acid_7201 5.821e-122 404.0 COG0612@1|root,COG0612@2|Bacteria,3Y3M9@57723|Acidobacteria 57723|Acidobacteria S Belongs to the peptidase M16 family - - - - - - - - - - - - Peptidase_M16,Peptidase_M16_C HKD3_k127_7267881_2 1121430.JMLG01000005_gene785 4.571e-158 511.0 COG0015@1|root,COG0015@2|Bacteria,1TPMM@1239|Firmicutes,2485N@186801|Clostridia,260RX@186807|Peptococcaceae 186801|Clostridia F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily purB - 4.3.2.2 ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048,M00049 R01083,R04559 RC00379,RC00444,RC00445 ko00000,ko00001,ko00002,ko01000 - - - ADSL_C,Lyase_1 HKD3_k127_7267881_0 1232410.KI421413_gene539 1.537e-188 603.0 COG0034@1|root,COG0034@2|Bacteria,1MU0V@1224|Proteobacteria,42MDB@68525|delta/epsilon subdivisions,2WITV@28221|Deltaproteobacteria,43RZA@69541|Desulfuromonadales 28221|Deltaproteobacteria F Glutamine amidotransferases class-II purF - 2.4.2.14 ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048 R01072 RC00010,RC02724,RC02752 ko00000,ko00001,ko00002,ko01000,ko01002 - - - GATase_6,GATase_7,Pribosyltran HKD3_k127_7267881_3 401053.AciPR4_0505 2.32e-122 401.0 COG0150@1|root,COG0150@2|Bacteria,3Y2GN@57723|Acidobacteria,2JITJ@204432|Acidobacteriia 204432|Acidobacteriia F Phosphoribosylformylglycinamidine cyclo-ligase purM - 6.3.3.1 ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04208 RC01100 ko00000,ko00001,ko00002,ko01000 - - - AIRS,AIRS_C HKD3_k127_7267881_5 443143.GM18_1766 1.897e-69 241.0 COG0299@1|root,COG0299@2|Bacteria,1MWN1@1224|Proteobacteria,42R30@68525|delta/epsilon subdivisions,2WJT0@28221|Deltaproteobacteria,43UEY@69541|Desulfuromonadales 28221|Deltaproteobacteria F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate purN - 2.1.2.2 ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 M00048 R04325,R04326 RC00026,RC00197,RC01128 ko00000,ko00001,ko00002,ko01000 - - - Formyl_trans_N HKD3_k127_7267881_1 926569.ANT_07690 6.349e-163 524.0 COG0162@1|root,COG0162@2|Bacteria,2G64J@200795|Chloroflexi 200795|Chloroflexi J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) tyrS - 6.1.1.1 ko:K01866 ko00970,map00970 M00359,M00360 R02918 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - S4,tRNA-synt_1b HKD3_k127_7286944_2 234267.Acid_2691 3.364e-05 46.0 COG0673@1|root,COG0673@2|Bacteria,3Y3V4@57723|Acidobacteria 57723|Acidobacteria S PFAM oxidoreductase domain protein - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C HKD3_k127_7286944_0 1185876.BN8_02139 1.135e-227 736.0 COG2866@1|root,COG2866@2|Bacteria,4NGIE@976|Bacteroidetes,47N2M@768503|Cytophagia 976|Bacteroidetes E Zinc carboxypeptidase - - - - - - - - - - - - Peptidase_M14 HKD3_k127_7286944_1 397287.C807_01823 1.553e-36 149.0 COG4976@1|root,COG4976@2|Bacteria,1USUS@1239|Firmicutes,25AW2@186801|Clostridia,27M13@186928|unclassified Lachnospiraceae 186801|Clostridia S ubiE/COQ5 methyltransferase family - - - - - - - - - - - - Methyltransf_11 HKD3_k127_7288440_1 1089553.Tph_c28380 5.53e-45 175.0 COG1947@1|root,COG1947@2|Bacteria,1TPXV@1239|Firmicutes,24898@186801|Clostridia,42GD3@68295|Thermoanaerobacterales 186801|Clostridia F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol ispE - 2.7.1.148 ko:K00919 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05634 RC00002,RC01439 ko00000,ko00001,ko00002,ko01000 - - - GHMP_kinases_C,GHMP_kinases_N HKD3_k127_7288440_0 1267533.KB906733_gene3415 8.694e-51 203.0 COG0457@1|root,COG0457@2|Bacteria,3Y35N@57723|Acidobacteria,2JHIM@204432|Acidobacteriia 204432|Acidobacteriia S Tetratricopeptide repeat - - - - - - - - - - - - TPR_16,TPR_19,TPR_2,TPR_6,TPR_7,TPR_8 HKD3_k127_7290243_1 1158345.JNLL01000001_gene173 3.984e-18 95.0 COG3137@1|root,COG3137@2|Bacteria,2G4AG@200783|Aquificae 200783|Aquificae M Protein of unknown function, DUF481 - - - ko:K07283 - - - - ko00000 - - - DUF481 HKD3_k127_7290243_2 1267535.KB906767_gene1549 3.067e-13 76.0 COG1664@1|root,COG1664@2|Bacteria 2|Bacteria M Polymer-forming cytoskeletal - - - - - - - - - - - - Bactofilin HKD3_k127_7290243_0 1047013.AQSP01000071_gene1930 9.993e-116 381.0 COG1077@1|root,COG1077@2|Bacteria,2NNVU@2323|unclassified Bacteria 2|Bacteria D MreB/Mbl protein mreB GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0005886,GO:0007049,GO:0008150,GO:0008360,GO:0009987,GO:0016020,GO:0019954,GO:0022402,GO:0022414,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0032505,GO:0042802,GO:0043093,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051301,GO:0051302,GO:0051782,GO:0051983,GO:0065007,GO:0065008,GO:0071944 - ko:K03569 - - - - ko00000,ko02048,ko03036,ko04812 1.A.33.1,9.B.157.1 - - MreB_Mbl HKD3_k127_7291589_1 1379270.AUXF01000005_gene449 1.913e-131 450.0 COG0577@1|root,COG0577@2|Bacteria,1ZUCK@142182|Gemmatimonadetes 142182|Gemmatimonadetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD HKD3_k127_7291589_0 861299.J421_1415 2.573e-161 517.0 COG0577@1|root,COG0577@2|Bacteria,1ZUG3@142182|Gemmatimonadetes 142182|Gemmatimonadetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD HKD3_k127_7291589_3 861299.J421_2900 5.236e-112 374.0 COG0577@1|root,COG0577@2|Bacteria,1ZUN6@142182|Gemmatimonadetes 142182|Gemmatimonadetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD HKD3_k127_7291589_2 1379270.AUXF01000005_gene454 2.584e-117 390.0 COG0577@1|root,COG0577@2|Bacteria,1ZSU3@142182|Gemmatimonadetes 142182|Gemmatimonadetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD HKD3_k127_7314102_5 886293.Sinac_6582 1.574e-42 158.0 COG0780@1|root,COG0780@2|Bacteria,2J07W@203682|Planctomycetes 203682|Planctomycetes H Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) queF - 1.7.1.13 ko:K09457 ko00790,ko01100,map00790,map01100 - R07605 RC01875 ko00000,ko00001,ko01000,ko03016 - - - QueF HKD3_k127_7314102_8 448385.sce1473 1.349e-19 97.0 COG1193@1|root,COG1193@2|Bacteria,1NCS6@1224|Proteobacteria,42VGJ@68525|delta/epsilon subdivisions,2WRA6@28221|Deltaproteobacteria,2YVNG@29|Myxococcales 28221|Deltaproteobacteria L Smr domain - - - - - - - - - - - - Smr HKD3_k127_7314102_1 886293.Sinac_6154 1.128e-190 625.0 COG2866@1|root,COG2866@2|Bacteria,2IXPH@203682|Planctomycetes 203682|Planctomycetes E PFAM Zinc carboxypeptidase - - - - - - - - - - - - Peptidase_M14 HKD3_k127_7314102_0 234267.Acid_0830 3.491e-218 696.0 COG2936@1|root,COG2936@2|Bacteria,3Y2WR@57723|Acidobacteria 57723|Acidobacteria S X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - ko:K06978 - - - - ko00000 - - - PepX_C,Peptidase_S15 HKD3_k127_7314102_4 1047013.AQSP01000140_gene2489 1.163e-61 229.0 COG0739@1|root,COG0739@2|Bacteria,2NPTX@2323|unclassified Bacteria 2|Bacteria M Peptidase family M23 yebA - - - - - - - - - - - OapA,Peptidase_M23 HKD3_k127_7314102_6 1340493.JNIF01000003_gene1551 9.56e-36 157.0 COG2318@1|root,COG2318@2|Bacteria,3Y503@57723|Acidobacteria 57723|Acidobacteria S DinB family - - - - - - - - - - - - DinB_2 HKD3_k127_7314102_2 404589.Anae109_0318 7.506e-153 499.0 COG1640@1|root,COG1640@2|Bacteria,1QTVJ@1224|Proteobacteria,42PZB@68525|delta/epsilon subdivisions,2WK77@28221|Deltaproteobacteria,2YVA7@29|Myxococcales 28221|Deltaproteobacteria G 4-alpha-glucanotransferase malQ - 2.4.1.25 ko:K00705 ko00500,ko01100,map00500,map01100 - R05196 RC00049 ko00000,ko00001,ko01000 - GH77 - Glyco_hydro_77 HKD3_k127_7314102_3 234267.Acid_5283 7.173e-122 402.0 COG0436@1|root,COG0436@2|Bacteria,3Y2VQ@57723|Acidobacteria 57723|Acidobacteria E PFAM Aminotransferase class I and II - - - - - - - - - - - - Aminotran_1_2 HKD3_k127_7314102_7 1519464.HY22_07105 3.09e-20 94.0 COG1506@1|root,COG1506@2|Bacteria 2|Bacteria E serine-type peptidase activity - - - - - - - - - - - - Peptidase_S9 HKD3_k127_7322509_1 671143.DAMO_1432 6.735e-40 156.0 COG4636@1|root,COG4636@2|Bacteria,2NRM2@2323|unclassified Bacteria 2|Bacteria S Putative restriction endonuclease - - - - - - - - - - - - Uma2 HKD3_k127_7322509_2 1121920.AUAU01000009_gene1864 1.017e-23 113.0 COG0457@1|root,COG0457@2|Bacteria,3Y5YE@57723|Acidobacteria 57723|Acidobacteria S Tetratricopeptide repeat - - - - - - - - - - - - - HKD3_k127_7322509_3 521674.Plim_2357 2.635e-14 82.0 COG0457@1|root,COG0457@2|Bacteria,2J3CZ@203682|Planctomycetes 203682|Planctomycetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_16,TPR_2 HKD3_k127_7322509_0 1340493.JNIF01000004_gene304 3.523e-53 204.0 COG1404@1|root,COG5164@1|root,COG1404@2|Bacteria,COG5164@2|Bacteria,3Y5WB@57723|Acidobacteria 57723|Acidobacteria O PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - - - - - - - - - - PA,Peptidase_S8 HKD3_k127_732262_1 402777.KB235903_gene663 8.608e-17 92.0 COG2755@1|root,COG2755@2|Bacteria,1G060@1117|Cyanobacteria,1H9JP@1150|Oscillatoriales 1117|Cyanobacteria E GDSL-like Lipase/Acylhydrolase - - - - - - - - - - - - Lipase_GDSL HKD3_k127_732262_0 886293.Sinac_2261 3.066e-110 371.0 COG1696@1|root,COG1696@2|Bacteria,2IX06@203682|Planctomycetes 203682|Planctomycetes M membrane protein involved in D-alanine - - - - - - - - - - - - MBOAT HKD3_k127_7337047_2 1191523.MROS_2800 8.272e-72 246.0 COG0334@1|root,COG0334@2|Bacteria 2|Bacteria E glutamate dehydrogenase [NAD(P)+] activity gluD GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.2,1.4.1.3,1.4.1.4 ko:K00260,ko:K00261,ko:K00262 ko00220,ko00250,ko00430,ko00471,ko00910,ko01100,ko01200,ko04217,ko04964,map00220,map00250,map00430,map00471,map00910,map01100,map01200,map04217,map04964 M00740 R00243,R00248 RC00006,RC02799 ko00000,ko00001,ko00002,ko01000,ko04147 - - iJN678.gdhA ELFV_dehydrog,ELFV_dehydrog_N HKD3_k127_7337047_0 861299.J421_3227 6.926e-165 530.0 COG0334@1|root,COG0334@2|Bacteria,1ZSQB@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Glutamate/Leucine/Phenylalanine/Valine dehydrogenase - - 1.4.1.3 ko:K00261 ko00220,ko00250,ko00471,ko00910,ko01100,ko01200,ko04217,ko04964,map00220,map00250,map00471,map00910,map01100,map01200,map04217,map04964 M00740 R00243,R00248 RC00006,RC02799 ko00000,ko00001,ko00002,ko01000,ko04147 - - - ELFV_dehydrog,ELFV_dehydrog_N HKD3_k127_7337047_1 292459.STH2466 8.701e-95 315.0 COG1884@1|root,COG1884@2|Bacteria,1TQAD@1239|Firmicutes,24BDK@186801|Clostridia 186801|Clostridia I PFAM Methylmalonyl-CoA mutase - - 5.4.99.2 ko:K01848 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00375,M00376,M00741 R00833 RC00395 ko00000,ko00001,ko00002,ko01000 - - - MM_CoA_mutase HKD3_k127_7341612_0 234267.Acid_3450 2.631e-104 351.0 COG0520@1|root,COG0520@2|Bacteria,3Y4TH@57723|Acidobacteria 57723|Acidobacteria E Aminotransferase class-V - - - - - - - - - - - - Aminotran_5 HKD3_k127_7347832_7 545694.TREPR_0668 3.326e-19 90.0 COG0248@1|root,COG0248@2|Bacteria,2J5XU@203691|Spirochaetes 203691|Spirochaetes FP Ppx GppA phosphatase family - - 3.6.1.11,3.6.1.40 ko:K01524 ko00230,map00230 - R03409 RC00002 ko00000,ko00001,ko01000 - - - HD,Ppx-GppA HKD3_k127_7347832_0 649747.HMPREF0083_00362 4.342e-199 646.0 COG0855@1|root,COG0855@2|Bacteria,1TNZM@1239|Firmicutes,4HA88@91061|Bacilli,26SKK@186822|Paenibacillaceae 91061|Bacilli P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) ppk - 2.7.4.1 ko:K00937 ko00190,ko03018,map00190,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - PP_kinase,PP_kinase_C,PP_kinase_N HKD3_k127_7347832_4 289376.THEYE_A0955 1.29e-118 409.0 COG3876@1|root,COG3876@2|Bacteria 2|Bacteria G Protein conserved in bacteria - - - - - - - - - - - - DUF1343 HKD3_k127_7347832_2 926550.CLDAP_28980 6.992e-133 433.0 COG1085@1|root,COG1085@2|Bacteria,2G6K5@200795|Chloroflexi 200795|Chloroflexi H TIGRFAM galactose-1-phosphate uridylyltransferase galT - 2.7.7.12 ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 M00362,M00554,M00632 R00955 RC00002 ko00000,ko00001,ko00002,ko01000 - - - GalP_UDP_tr_C,GalP_UDP_transf HKD3_k127_7347832_1 926549.KI421517_gene463 9.304e-195 622.0 COG2234@1|root,COG2234@2|Bacteria,4NFDJ@976|Bacteroidetes,47KZX@768503|Cytophagia 976|Bacteroidetes S PA domain - - - - - - - - - - - - PA,Peptidase_M28 HKD3_k127_7347832_3 204669.Acid345_4068 1.624e-125 431.0 COG1752@1|root,COG4775@1|root,COG1752@2|Bacteria,COG4775@2|Bacteria,3Y4B2@57723|Acidobacteria,2JJ4V@204432|Acidobacteriia 204432|Acidobacteriia M Patatin-like phospholipase - - - ko:K07001 - - - - ko00000 - - - Bac_surface_Ag,Patatin HKD3_k127_7347832_5 330214.NIDE2608 1.382e-65 239.0 COG1943@1|root,COG1943@2|Bacteria 2|Bacteria L Transposase - - - - - - - - - - - - HTH_23,Y1_Tnp HKD3_k127_7347832_6 1192034.CAP_1062 9.93e-48 197.0 COG0515@1|root,COG2114@1|root,COG4753@1|root,COG0515@2|Bacteria,COG2114@2|Bacteria,COG4753@2|Bacteria,1PYP4@1224|Proteobacteria,42QP0@68525|delta/epsilon subdivisions,2X7E7@28221|Deltaproteobacteria,2Z3FW@29|Myxococcales 28221|Deltaproteobacteria T serine threonine protein kinase - - - - - - - - - - - - Guanylate_cyc,Pkinase,Response_reg HKD3_k127_7354231_2 234267.Acid_1333 3.528e-12 67.0 COG1012@1|root,COG1012@2|Bacteria 2|Bacteria C belongs to the aldehyde dehydrogenase family eutE GO:0003674,GO:0003824,GO:0004029,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.87 ko:K04021,ko:K13922 ko00620,ko00640,ko01100,ko01120,map00620,map00640,map01100,map01120 - R00228,R09097 RC00004,RC00184,RC01195 ko00000,ko00001,ko01000 - - - Aldedh HKD3_k127_7354231_3 935836.JAEL01000013_gene4531 1.641e-07 56.0 COG4576@1|root,COG4576@2|Bacteria,1VEI4@1239|Firmicutes,4IKJM@91061|Bacilli,1ZHI4@1386|Bacillus 91061|Bacilli CQ Ethanolamine utilisation protein EutN/carboxysome - - - ko:K04028 - - - - ko00000 - - - EutN_CcmL HKD3_k127_7354231_1 278957.ABEA03000086_gene2503 1.583e-12 77.0 COG4576@1|root,COG4576@2|Bacteria,46WMY@74201|Verrucomicrobia,3K8EE@414999|Opitutae 414999|Opitutae CQ Ethanolamine utilisation protein EutN/carboxysome - - - - - - - - - - - - EutN_CcmL HKD3_k127_7354231_0 234267.Acid_1334 4.052e-115 384.0 COG0235@1|root,COG0235@2|Bacteria,3Y66P@57723|Acidobacteria 57723|Acidobacteria G Class II Aldolase and Adducin N-terminal domain - - - - - - - - - - - - Aldolase_II HKD3_k127_7355151_2 1120972.AUMH01000018_gene1933 1.111e-116 390.0 COG1082@1|root,COG1082@2|Bacteria,1TPJT@1239|Firmicutes,4H9KJ@91061|Bacilli,278WS@186823|Alicyclobacillaceae 91061|Bacilli G AP endonuclease family 2 C terminus - - - - - - - - - - - - AP_endonuc_2,AP_endonuc_2_N HKD3_k127_7355151_1 357808.RoseRS_2880 7.074e-128 419.0 COG0673@1|root,COG0673@2|Bacteria,2G5VF@200795|Chloroflexi,377Y2@32061|Chloroflexia 32061|Chloroflexia S PFAM oxidoreductase domain protein - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C HKD3_k127_7355151_0 1379270.AUXF01000002_gene1624 1.463e-150 481.0 COG0031@1|root,COG0031@2|Bacteria,1ZTHE@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Pyridoxal-phosphate dependent enzyme - - 2.5.1.47 ko:K01738 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 M00021 R00897,R03601,R04859 RC00020,RC02814,RC02821 ko00000,ko00001,ko00002,ko01000 - - - PALP HKD3_k127_7355151_4 378806.STAUR_2347 1.482e-74 278.0 COG1045@1|root,COG1045@2|Bacteria,1MVFX@1224|Proteobacteria,42MND@68525|delta/epsilon subdivisions,2WJC3@28221|Deltaproteobacteria,2YY80@29|Myxococcales 28221|Deltaproteobacteria E serine O-acetyltransferase cysE - 2.3.1.30 ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 M00021 R00586 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 - - - Hexapep,SATase_N HKD3_k127_7355151_3 2002.JOEQ01000005_gene3672 3.506e-85 298.0 COG0421@1|root,COG0421@2|Bacteria,2I3HX@201174|Actinobacteria,4EHKS@85012|Streptosporangiales 201174|Actinobacteria E Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - - - - - - - - - - Spermine_synth HKD3_k127_7360260_5 1340493.JNIF01000003_gene2554 1.425e-06 57.0 COG0799@1|root,COG0799@2|Bacteria,3Y5SD@57723|Acidobacteria 57723|Acidobacteria S Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation rsfS - - ko:K09710 - - - - ko00000,ko03009 - - - RsfS HKD3_k127_7360260_3 1232410.KI421412_gene397 7.224e-34 143.0 COG1057@1|root,COG1057@2|Bacteria,1RD0J@1224|Proteobacteria,42SD9@68525|delta/epsilon subdivisions,2WPPN@28221|Deltaproteobacteria,43TRZ@69541|Desulfuromonadales 28221|Deltaproteobacteria F Cytidylyltransferase-like nadD GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 ko:K00969 ko00760,ko01100,map00760,map01100 M00115 R00137,R03005 RC00002 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_3200 CTP_transf_like HKD3_k127_7360260_0 1499967.BAYZ01000165_gene6646 2.44e-118 389.0 COG0536@1|root,COG0536@2|Bacteria,2NNS6@2323|unclassified Bacteria 2|Bacteria S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control obg GO:0000003,GO:0000160,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019954,GO:0023052,GO:0030436,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035556,GO:0035639,GO:0036094,GO:0043021,GO:0043022,GO:0043167,GO:0043168,GO:0043934,GO:0044424,GO:0044464,GO:0044877,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - ko:K03979 - - - - ko00000,ko01000,ko03009 - - - DUF1967,GTP1_OBG,MMR_HSR1 HKD3_k127_7360260_2 1198114.AciX9_1168 1.601e-54 203.0 COG2186@1|root,COG2186@2|Bacteria,3Y47U@57723|Acidobacteria,2JI8P@204432|Acidobacteriia 204432|Acidobacteriia K FCD - - - ko:K05799 - - - - ko00000,ko03000 - - - FCD,GntR HKD3_k127_7360260_4 1408444.JHYC01000025_gene95 3.894e-11 75.0 COG1475@1|root,COG1475@2|Bacteria,1MW2E@1224|Proteobacteria,1RN65@1236|Gammaproteobacteria,1JDWP@118969|Legionellales 118969|Legionellales K Belongs to the ParB family parB_2 - - ko:K03497 - - - - ko00000,ko03000,ko03036,ko04812 - - - ParBc HKD3_k127_7360260_1 880070.Cycma_4709 1.747e-90 308.0 COG0673@1|root,COG0673@2|Bacteria,4NGHJ@976|Bacteroidetes,47NH0@768503|Cytophagia 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C HKD3_k127_7361515_8 314285.KT71_03137 1.326e-28 123.0 COG0834@1|root,COG1301@1|root,COG0834@2|Bacteria,COG1301@2|Bacteria,1P22C@1224|Proteobacteria,1RSGY@1236|Gammaproteobacteria,1J8Z6@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - ko:K02030 - M00236 - - ko00000,ko00002,ko02000 3.A.1.3 - - SBP_bac_3,SDF HKD3_k127_7361515_5 1144307.PMI04_03383 3.04e-57 206.0 2C38E@1|root,33Z2K@2|Bacteria,1MY9G@1224|Proteobacteria,2U9BB@28211|Alphaproteobacteria,2K5SY@204457|Sphingomonadales 204457|Sphingomonadales - - - - - - - - - - - - - - - HKD3_k127_7361515_1 1340493.JNIF01000004_gene791 3.986e-135 450.0 COG0515@1|root,COG0515@2|Bacteria 1340493.JNIF01000004_gene791|- KLT protein kinase activity - - - - - - - - - - - - - HKD3_k127_7361515_4 448385.sce6976 7.055e-84 303.0 COG1413@1|root,COG3202@1|root,COG1413@2|Bacteria,COG3202@2|Bacteria 2|Bacteria C ATP:ADP antiporter activity - - - ko:K01932,ko:K03301 - - - - ko00000,ko01000 2.A.12 - - Glyco_transf_4,Glycos_transf_1,HEAT_2,TLC HKD3_k127_7361515_2 448385.sce6263 3.433e-100 343.0 COG3202@1|root,COG3202@2|Bacteria,1MVP5@1224|Proteobacteria,438CB@68525|delta/epsilon subdivisions,2X3MN@28221|Deltaproteobacteria,2YWIY@29|Myxococcales 28221|Deltaproteobacteria C ATP ADP translocase - - - ko:K03301 - - - - ko00000 2.A.12 - - - HKD3_k127_7361515_7 234267.Acid_5255 4.981e-29 127.0 2B11W@1|root,31TFA@2|Bacteria,3Y4Z8@57723|Acidobacteria 57723|Acidobacteria - - - - - - - - - - - - - - - HKD3_k127_7361515_3 1379698.RBG1_1C00001G0194 3.646e-93 321.0 COG3211@1|root,COG3540@1|root,COG3211@2|Bacteria,COG3540@2|Bacteria,2NS16@2323|unclassified Bacteria 2|Bacteria P PhoD-like phosphatase phoX - 3.1.3.1 ko:K01113,ko:K07093 ko00790,ko01100,ko02020,map00790,map01100,map02020 M00126 R04620 RC00017 ko00000,ko00001,ko00002,ko01000 - - - DUF839 HKD3_k127_7361515_9 667014.Thein_0968 3.014e-18 99.0 COG0671@1|root,COG0671@2|Bacteria 2|Bacteria I phosphatidate phosphatase activity - GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009605,GO:0009607,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0042578,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0046467,GO:0046493,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0071704,GO:0075136,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.27 ko:K19302 ko00550,map00550 - R05627 RC00002 ko00000,ko00001,ko01000,ko01011 - - - LPG_synthase_TM,PAP2 HKD3_k127_7361515_0 404589.Anae109_3731 5.441e-162 543.0 COG4775@1|root,COG4775@2|Bacteria 2|Bacteria M membrane organization - - - - - - - - - - - - Bac_surface_Ag,CarboxypepD_reg,Laminin_G_3,POTRA HKD3_k127_7361515_6 1123073.KB899241_gene3078 9.999e-39 147.0 COG1554@1|root,COG1554@2|Bacteria,1NZ6Z@1224|Proteobacteria,1T320@1236|Gammaproteobacteria,1XD7M@135614|Xanthomonadales 135614|Xanthomonadales G Glycosyl hydrolase family 65, N-terminal domain - - 3.2.1.51 ko:K15923 ko00511,map00511 - - - ko00000,ko00001,ko01000 - GH95 - Glyco_hyd_65N_2 HKD3_k127_7367844_0 234267.Acid_4393 1.861e-125 427.0 COG0515@1|root,COG0515@2|Bacteria 234267.Acid_4393|- KLT protein kinase activity - - - - - - - - - - - - - HKD3_k127_7370112_3 1121920.AUAU01000018_gene1781 1.266e-56 201.0 COG0439@1|root,COG0439@2|Bacteria,3Y2QZ@57723|Acidobacteria 57723|Acidobacteria I acetyl-CoA carboxylase, biotin carboxylase - - 6.3.4.14,6.4.1.2 ko:K01961 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04385 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 - - - Biotin_carb_C,Biotin_carb_N,CPSase_L_D2 HKD3_k127_7370112_5 682795.AciX8_1564 1.745e-34 140.0 COG0352@1|root,COG0352@2|Bacteria,3Y4Y5@57723|Acidobacteria,2JJM3@204432|Acidobacteriia 204432|Acidobacteriia H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) thiE - 2.5.1.3 ko:K00788 ko00730,ko01100,map00730,map01100 M00127 R03223,R10712 RC00224,RC03255,RC03397 ko00000,ko00001,ko00002,ko01000 - - - TMP-TENI HKD3_k127_7370112_0 251221.35212231 1.271e-169 551.0 COG0531@1|root,COG0531@2|Bacteria,1G2VF@1117|Cyanobacteria 1117|Cyanobacteria E PFAM Amino acid permease - - - ko:K03294 - - - - ko00000 2.A.3.2 - - AA_permease_2 HKD3_k127_7370112_2 338963.Pcar_3127 3.454e-85 293.0 COG1226@1|root,COG1226@2|Bacteria,1MU1R@1224|Proteobacteria,42MW6@68525|delta/epsilon subdivisions,2WIYU@28221|Deltaproteobacteria,43UJB@69541|Desulfuromonadales 28221|Deltaproteobacteria P Ion channel - - - ko:K10716 - - - - ko00000,ko02000 1.A.1.1,1.A.1.13,1.A.1.17,1.A.1.24,1.A.1.25,1.A.1.6 - - Ion_trans_2,TrkA_C,TrkA_N HKD3_k127_7370112_1 204669.Acid345_4424 2.815e-91 317.0 COG0190@1|root,COG0190@2|Bacteria,3Y2IN@57723|Acidobacteria,2JIT2@204432|Acidobacteriia 204432|Acidobacteriia F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate folD - 1.5.1.5,3.5.4.9 ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R01220,R01655 RC00202,RC00578 ko00000,ko00001,ko00002,ko01000 - - - THF_DHG_CYH,THF_DHG_CYH_C HKD3_k127_7370112_4 1122919.KB905563_gene2547 3.705e-35 141.0 COG0237@1|root,COG0237@2|Bacteria,1V6FS@1239|Firmicutes,4HII3@91061|Bacilli,26WY5@186822|Paenibacillaceae 91061|Bacilli H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A coaE GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 ko:K00859 ko00770,ko01100,map00770,map01100 M00120 R00130 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - iSB619.SA_RS08510 CoaE HKD3_k127_7370782_4 234267.Acid_5351 5.297e-67 237.0 COG0682@1|root,COG0682@2|Bacteria,3Y4HT@57723|Acidobacteria 57723|Acidobacteria M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins lgt - - ko:K13292 - - - - ko00000,ko01000 - - - LGT HKD3_k127_7370782_3 370438.PTH_1818 1.425e-83 289.0 COG0564@1|root,COG0564@2|Bacteria,1TPCM@1239|Firmicutes,247Y2@186801|Clostridia,2607F@186807|Peptococcaceae 186801|Clostridia J Responsible for synthesis of pseudouridine from uracil rluD - 5.4.99.23 ko:K06180 - - - - ko00000,ko01000,ko03009 - - - PseudoU_synth_2,S4 HKD3_k127_7370782_5 742738.HMPREF9460_01340 1.553e-34 141.0 COG0494@1|root,COG0494@2|Bacteria,1V6F5@1239|Firmicutes,24JFS@186801|Clostridia,268ZS@186813|unclassified Clostridiales 186801|Clostridia L NUDIX domain nudF - 3.6.1.13 ko:K01515 ko00230,map00230 - R01054 RC00002 ko00000,ko00001,ko01000 - - - NUDIX HKD3_k127_7370782_0 234267.Acid_5892 1.33e-245 769.0 COG1032@1|root,COG1032@2|Bacteria 2|Bacteria C radical SAM domain protein - - - ko:K22318 - - - - ko00000 - - - B12-binding,Radical_SAM HKD3_k127_7370782_2 234267.Acid_1085 1.03e-83 287.0 COG0123@1|root,COG0123@2|Bacteria,3Y46F@57723|Acidobacteria 57723|Acidobacteria BQ Histone deacetylase domain - - - - - - - - - - - - Hist_deacetyl HKD3_k127_7370782_1 661478.OP10G_3435 4.551e-125 409.0 COG0466@1|root,COG0466@2|Bacteria 2|Bacteria O ATP-dependent peptidase activity lon - 3.4.21.53 ko:K01338 ko04112,map04112 - - - ko00000,ko00001,ko01000,ko01002 - - - AAA,LON_substr_bdg,Lon_C HKD3_k127_7385510_5 472759.Nhal_3531 4.122e-42 164.0 2CNMZ@1|root,32SHD@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_7385510_2 292459.STH832 6.437e-126 415.0 COG0626@1|root,COG0626@2|Bacteria,1TPC7@1239|Firmicutes,25E6I@186801|Clostridia 186801|Clostridia E PFAM Cys Met metabolism megL - 2.5.1.48,4.4.1.11 ko:K01739,ko:K01761 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 M00017 R00654,R00999,R01288,R02508,R03217,R03260,R04770,R04944,R04945,R04946 RC00020,RC00056,RC00069,RC00196,RC00348,RC00420,RC01209,RC01210,RC02848,RC02866 ko00000,ko00001,ko00002,ko01000 - - - Cys_Met_Meta_PP HKD3_k127_7385510_1 1230341.MJ3_09373 3.549e-126 421.0 COG0591@1|root,COG0591@2|Bacteria,1TXVZ@1239|Firmicutes,4HE4E@91061|Bacilli 91061|Bacilli E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - ko:K14387 ko04725,ko05231,map04725,map05231 - - - ko00000,ko00001,ko02000 2.A.21.8 - - SSF HKD3_k127_7385510_0 251221.35212555 5.035e-240 766.0 COG2366@1|root,COG2366@2|Bacteria,1G4M5@1117|Cyanobacteria 1117|Cyanobacteria S penicillin amidase - - 3.5.1.11 ko:K01434 ko00311,ko01130,map00311,map01130 - R02170 RC00166,RC00328 ko00000,ko00001,ko01000,ko01002 - - - Penicil_amidase HKD3_k127_7385510_3 742725.HMPREF9450_00619 3.171e-92 324.0 COG0407@1|root,COG0407@2|Bacteria,4NTJT@976|Bacteroidetes 976|Bacteroidetes H Uroporphyrinogen decarboxylase (URO-D) - - - - - - - - - - - - URO-D HKD3_k127_7385510_4 234267.Acid_6968 4.446e-66 233.0 COG5012@1|root,COG5012@2|Bacteria,3Y88D@57723|Acidobacteria 57723|Acidobacteria S B12 binding domain - - - - - - - - - - - - B12-binding,B12-binding_2 HKD3_k127_7385510_6 379066.GAU_2031 8.347e-35 136.0 COG0531@1|root,COG0531@2|Bacteria,1ZUQJ@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Amino acid permease - - - ko:K03294 - - - - ko00000 2.A.3.2 - - AA_permease_2 HKD3_k127_7386210_4 1499967.BAYZ01000074_gene2146 5.498e-190 616.0 COG2414@1|root,COG2414@2|Bacteria,2NP2Q@2323|unclassified Bacteria 2|Bacteria C Aldehyde ferredoxin oxidoreductase, N-terminal domain - - 1.2.7.5 ko:K03738 ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200 M00309 R08571 RC00242 ko00000,ko00001,ko00002,ko01000 - - - AFOR_C,AFOR_N HKD3_k127_7386210_8 243231.GSU2921 1.063e-63 237.0 COG0646@1|root,COG1410@1|root,COG0646@2|Bacteria,COG1410@2|Bacteria,1MV6G@1224|Proteobacteria,42NHZ@68525|delta/epsilon subdivisions,2WJ2H@28221|Deltaproteobacteria,43U7R@69541|Desulfuromonadales 28221|Deltaproteobacteria H Methionine synthase B12-binding module cap domain protein metH - 2.1.1.13 ko:K00548 ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230 M00017 R00946,R09365 RC00035,RC00113,RC01241 ko00000,ko00001,ko00002,ko01000 - - - B12-binding,B12-binding_2,Met_synt_B12,Pterin_bind,S-methyl_trans HKD3_k127_7386210_9 935948.KE386495_gene1221 1.594e-62 224.0 COG5012@1|root,COG5012@2|Bacteria,1V1P0@1239|Firmicutes,24G08@186801|Clostridia,42FJI@68295|Thermoanaerobacterales 186801|Clostridia S Methionine synthase B12-binding module cap domain protein - - 2.1.1.13 ko:K00548 ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230 M00017 R00946,R09365 RC00035,RC00113,RC01241 ko00000,ko00001,ko00002,ko01000 - - - B12-binding,B12-binding_2 HKD3_k127_7386210_14 272559.BF9343_0734 3.98e-17 91.0 COG1410@1|root,COG1410@2|Bacteria,4NQ85@976|Bacteroidetes,2FMYK@200643|Bacteroidia,4APAQ@815|Bacteroidaceae 976|Bacteroidetes E Vitamin B12 dependent methionine synthase, activation domain protein - - - - - - - - - - - - Met_synt_B12 HKD3_k127_7386210_7 1047013.AQSP01000134_gene1338 3.581e-120 403.0 COG5598@1|root,COG5598@2|Bacteria,2NQTC@2323|unclassified Bacteria 2|Bacteria H Trimethylamine methyltransferase (MTTB) - - 2.1.1.250 ko:K14083 ko00680,ko01120,ko01200,map00680,map01120,map01200 M00563 R09124,R10016 RC00035,RC00732,RC01144,RC02984 ko00000,ko00001,ko00002,ko01000 - - - MTTB HKD3_k127_7386210_15 1230343.CANP01000031_gene2509 2.034e-12 72.0 COG2340@1|root,COG2340@2|Bacteria,1NGQM@1224|Proteobacteria,1T6NF@1236|Gammaproteobacteria,1JDXC@118969|Legionellales 118969|Legionellales S Cysteine-rich secretory protein family - - - - - - - - - - - - CAP HKD3_k127_7386210_6 1379698.RBG1_1C00001G0607 9.03e-123 423.0 COG0457@1|root,COG0515@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,2NQNE@2323|unclassified Bacteria 2|Bacteria T Serine threonine protein kinase - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PASTA,Pkinase,TPR_2,TPR_8 HKD3_k127_7386210_2 313628.LNTAR_22894 1.606e-247 784.0 COG1501@1|root,COG1501@2|Bacteria 2|Bacteria G Belongs to the glycosyl hydrolase 31 family - - 3.2.1.177 ko:K01811 - - - - ko00000,ko01000 - GH31 - DUF4968,DUF5110,Gal_mutarotas_2,Glyco_hydro_31 HKD3_k127_7386210_13 326427.Cagg_1682 5.844e-28 116.0 COG0640@1|root,COG0640@2|Bacteria 2|Bacteria K DNA-binding transcription factor activity MA20_23570 - - ko:K03892 - - - - ko00000,ko03000 - - - HTH_34 HKD3_k127_7386210_1 1267534.KB906758_gene2265 8.15e-321 994.0 COG2936@1|root,COG2936@2|Bacteria,3Y33N@57723|Acidobacteria 57723|Acidobacteria S Hydrolase CocE NonD family - - - - - - - - - - - - PepX_C,Peptidase_S15 HKD3_k127_7386210_11 278963.ATWD01000002_gene672 3.24e-52 198.0 COG3595@1|root,COG3595@2|Bacteria,3Y4HG@57723|Acidobacteria,2JJ7G@204432|Acidobacteriia 204432|Acidobacteriia S Putative adhesin - - - - - - - - - - - - DUF4097 HKD3_k127_7386210_3 251229.Chro_0877 2.947e-195 627.0 COG1132@1|root,COG1132@2|Bacteria,1G1JY@1117|Cyanobacteria,3VINJ@52604|Pleurocapsales 1117|Cyanobacteria V ABC-type multidrug transport system ATPase and permease - - - ko:K06147 - - - - ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 - - ABC_membrane,ABC_tran HKD3_k127_7386210_16 1185876.BN8_02298 2.838e-05 55.0 COG4319@1|root,COG4319@2|Bacteria,4NRVE@976|Bacteroidetes,47QDU@768503|Cytophagia 976|Bacteroidetes S Domain of unknown function (DUF4440) - - - - - - - - - - - - DUF4440 HKD3_k127_7386210_0 1047013.AQSP01000142_gene203 0.0 1223.0 COG4447@1|root,COG4447@2|Bacteria 2|Bacteria S cellulose binding - - - - - - - - - - - - Sortilin-Vps10 HKD3_k127_7386210_5 671143.DAMO_0966 7.564e-165 526.0 COG0517@1|root,COG1994@1|root,COG0517@2|Bacteria,COG1994@2|Bacteria,2NPE1@2323|unclassified Bacteria 2|Bacteria S Peptidase family M50 spoIVFB GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - ko:K06212,ko:K06402 - - - - ko00000,ko01000,ko01002,ko02000 1.A.16.1.1,1.A.16.1.3 - - CBS,Form_Nir_trans,Peptidase_M50 HKD3_k127_7386210_12 1191523.MROS_0710 2.231e-35 144.0 COG0545@1|root,COG0652@1|root,COG2234@1|root,COG0545@2|Bacteria,COG0652@2|Bacteria,COG2234@2|Bacteria 2|Bacteria DZ aminopeptidase activity ppiC - 5.2.1.8 ko:K01802,ko:K03767,ko:K03768 ko01503,ko04217,map01503,map04217 - - - ko00000,ko00001,ko01000,ko03110,ko04147 - - - FKBP_C,FKBP_N,Peptidase_M28,Pro_isomerase HKD3_k127_7402197_3 404589.Anae109_1805 3.896e-21 93.0 COG3005@1|root,COG3005@2|Bacteria,1QYG3@1224|Proteobacteria,43CC8@68525|delta/epsilon subdivisions,2X7N4@28221|Deltaproteobacteria 28221|Deltaproteobacteria C Cytochrome c3 - - - - - - - - - - - - Paired_CXXCH_1 HKD3_k127_7402197_0 290397.Adeh_2001 2.624e-80 276.0 COG2864@1|root,COG2864@2|Bacteria,1NJEJ@1224|Proteobacteria,42NQM@68525|delta/epsilon subdivisions,2WK76@28221|Deltaproteobacteria 28221|Deltaproteobacteria C denitrification pathway - - - - - - - - - - - - Ni_hydr_CYTB HKD3_k127_7402197_2 1382356.JQMP01000004_gene531 1.379e-44 183.0 COG1971@1|root,COG1971@2|Bacteria,2G8IE@200795|Chloroflexi,27YSN@189775|Thermomicrobia 189775|Thermomicrobia P Probably functions as a manganese efflux pump - - - - - - - - - - - - - HKD3_k127_7402197_1 404589.Anae109_1807 7.435e-49 188.0 COG0501@1|root,COG0501@2|Bacteria 2|Bacteria O metalloendopeptidase activity - - - ko:K03799 - M00743 - - ko00000,ko00002,ko01000,ko01002 - - - Peptidase_M48,Peptidase_M56 HKD3_k127_7402197_5 404589.Anae109_1809 4.04e-15 85.0 COG4585@1|root,COG4585@2|Bacteria,1N0JE@1224|Proteobacteria,42UG3@68525|delta/epsilon subdivisions,2WQFT@28221|Deltaproteobacteria,2Z1DF@29|Myxococcales 28221|Deltaproteobacteria T Histidine kinase - - - - - - - - - - - - HAMP,HATPase_c,HisKA_3 HKD3_k127_7414985_1 338969.Rfer_0259 3.552e-94 323.0 COG3303@1|root,COG3303@2|Bacteria,1PEVM@1224|Proteobacteria,2VMWI@28216|Betaproteobacteria 28216|Betaproteobacteria C Doubled CXXCH motif (Paired_CXXCH_1) - - - - - - - - - - - - Paired_CXXCH_1 HKD3_k127_7414985_0 204669.Acid345_4549 7.949e-248 798.0 COG1197@1|root,COG1197@2|Bacteria,3Y3IE@57723|Acidobacteria,2JIHQ@204432|Acidobacteriia 204432|Acidobacteriia L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site mfd - - ko:K03723 ko03420,map03420 - - - ko00000,ko00001,ko01000,ko03400 - - - CarD_CdnL_TRCF,DEAD,Helicase_C,TRCF HKD3_k127_7436906_1 1267533.KB906733_gene3215 6.286e-140 476.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,3Y2PK@57723|Acidobacteria,2JM7T@204432|Acidobacteriia 204432|Acidobacteriia KLTU Protein kinase domain - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PD40,Pkinase HKD3_k127_7436906_4 1278073.MYSTI_02901 6.742e-101 337.0 COG1475@1|root,COG1475@2|Bacteria 2|Bacteria K chromosome segregation - - - ko:K03497 - - - - ko00000,ko03000,ko03036,ko04812 - - - ParBc HKD3_k127_7436906_5 234267.Acid_3611 4.024e-86 298.0 COG1734@1|root,COG2208@1|root,COG1734@2|Bacteria,COG2208@2|Bacteria,3Y4RV@57723|Acidobacteria 57723|Acidobacteria KT Sigma factor PP2C-like phosphatases - - - - - - - - - - - - SpoIIE HKD3_k127_7436906_3 926569.ANT_29640 9.276e-105 361.0 COG0407@1|root,COG0407@2|Bacteria 2|Bacteria H Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III - - 4.1.1.37 ko:K01599 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R03197,R04972 RC00872 ko00000,ko00001,ko00002,ko01000 - - - URO-D HKD3_k127_7436906_2 234267.Acid_2658 5.548e-112 377.0 COG4409@1|root,COG4692@1|root,COG4409@2|Bacteria,COG4692@2|Bacteria 2|Bacteria G BNR repeat-like domain - - 3.2.1.40 ko:K05989 - - - - ko00000,ko01000 - - - BNR_2 HKD3_k127_7436906_0 1121033.AUCF01000012_gene984 8.358e-141 470.0 COG3203@1|root,COG3203@2|Bacteria,1MXEB@1224|Proteobacteria,2U8WW@28211|Alphaproteobacteria,2JSKJ@204441|Rhodospirillales 204441|Rhodospirillales M Protein of unknown function (DUF1302) - - - - - - - - - - - - DUF1302 HKD3_k127_7436906_6 1226994.AMZB01000116_gene2527 2.867e-23 102.0 28H52@1|root,2Z7HQ@2|Bacteria,1MXTF@1224|Proteobacteria,1RN8H@1236|Gammaproteobacteria,1YCWG@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria S Protein of unknown function (DUF1329) - - - - - - - - - - - - DUF1329 HKD3_k127_7438511_7 1237149.C900_01851 2.969e-07 55.0 COG0577@1|root,COG0577@2|Bacteria,4NI0C@976|Bacteroidetes,47M9R@768503|Cytophagia 976|Bacteroidetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD HKD3_k127_7438511_4 700598.Niako_7010 6.146e-89 326.0 COG2234@1|root,COG2234@2|Bacteria,4NIAY@976|Bacteroidetes,1IVXK@117747|Sphingobacteriia 976|Bacteroidetes S Peptidase family M28 - - - - - - - - - - - - Peptidase_M28 HKD3_k127_7438511_2 330214.NIDE3501 2.87e-170 561.0 COG4907@1|root,COG4907@2|Bacteria 2|Bacteria P membrane protein (DUF2207) yciQ GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - - - - - - - - - - DUF2207 HKD3_k127_7438511_6 479432.Sros_2687 9.594e-38 148.0 COG1704@1|root,COG1704@2|Bacteria,2GPS4@201174|Actinobacteria 201174|Actinobacteria J LemA family - - - ko:K03744 - - - - ko00000 - - - LemA HKD3_k127_7438511_0 1235803.C825_01835 1.166e-320 1054.0 28IXK@1|root,2Z8VG@2|Bacteria,4NHBH@976|Bacteroidetes,2FMQA@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - HKD3_k127_7438511_1 1267535.KB906767_gene5009 2.405e-280 934.0 COG0457@1|root,COG0457@2|Bacteria,3Y4J2@57723|Acidobacteria 57723|Acidobacteria S Domain of unknown function (DUF5107) - - - - - - - - - - - - DUF5107 HKD3_k127_7438511_3 886293.Sinac_1472 1.017e-119 394.0 COG1131@1|root,COG1131@2|Bacteria,2IY2I@203682|Planctomycetes 203682|Planctomycetes V AAA domain, putative AbiEii toxin, Type IV TA system - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_7438511_5 1123508.JH636441_gene3665 1.009e-48 180.0 COG0842@1|root,COG0842@2|Bacteria,2IY6D@203682|Planctomycetes 203682|Planctomycetes V ABC-2 type transporter - - - - - - - - - - - - ABC2_membrane HKD3_k127_7448320_31 391735.Veis_2524 2.157e-11 64.0 COG3547@1|root,COG3547@2|Bacteria,1MXKJ@1224|Proteobacteria,2VQ8S@28216|Betaproteobacteria,4AJA3@80864|Comamonadaceae 28216|Betaproteobacteria L transposase IS116 IS110 IS902 family protein - - - ko:K07486 - - - - ko00000 - - - DEDD_Tnp_IS110,Transposase_20 HKD3_k127_7448320_10 1122604.JONR01000001_gene1749 9.11e-65 238.0 COG3832@1|root,COG4978@1|root,COG3832@2|Bacteria,COG4978@2|Bacteria,1RDMX@1224|Proteobacteria,1S914@1236|Gammaproteobacteria,1XC1N@135614|Xanthomonadales 135614|Xanthomonadales KT Polyketide cyclase / dehydrase and lipid transport - - - - - - - - - - - - GyrI-like,Polyketide_cyc2 HKD3_k127_7448320_33 767031.HMPREF9137_1610 8.163e-08 65.0 COG3103@1|root,COG3103@2|Bacteria,4NIB7@976|Bacteroidetes,2FQFE@200643|Bacteroidia 976|Bacteroidetes T Sh3 type 3 domain protein - - - - - - - - - - - - - HKD3_k127_7448320_19 443143.GM18_3937 7.387e-49 185.0 COG2834@1|root,COG2834@2|Bacteria,1MXW0@1224|Proteobacteria,42QPE@68525|delta/epsilon subdivisions,2WN39@28221|Deltaproteobacteria,43VVR@69541|Desulfuromonadales 28221|Deltaproteobacteria M Outer membrane lipoprotein-sorting protein - - - - - - - - - - - - LolA_like HKD3_k127_7448320_24 292415.Tbd_0653 3.399e-31 127.0 COG0399@1|root,COG0399@2|Bacteria,1N0QW@1224|Proteobacteria,2VVHG@28216|Betaproteobacteria 28216|Betaproteobacteria M 23S rRNA-intervening sequence protein - - - - - - - - - - - - 23S_rRNA_IVP HKD3_k127_7448320_0 443144.GM21_0455 1.135e-164 554.0 COG0577@1|root,COG4591@1|root,COG0577@2|Bacteria,COG4591@2|Bacteria,1NR2V@1224|Proteobacteria,42YIK@68525|delta/epsilon subdivisions,2WUNG@28221|Deltaproteobacteria 28221|Deltaproteobacteria MV MacB-like periplasmic core domain lolE-2 - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD HKD3_k127_7448320_12 316067.Geob_2021 3.332e-62 242.0 COG1136@1|root,COG1136@2|Bacteria,1MU45@1224|Proteobacteria,4308T@68525|delta/epsilon subdivisions,2WKJ3@28221|Deltaproteobacteria 28221|Deltaproteobacteria V PFAM ABC transporter lolD-2 - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_7448320_1 1499967.BAYZ01000195_gene3106 8.089e-134 447.0 COG1807@1|root,COG1807@2|Bacteria,2NPZC@2323|unclassified Bacteria 2|Bacteria M Dolichyl-phosphate-mannose-protein mannosyltransferase MA20_19960 - - - - - - - - - - - PMT_2 HKD3_k127_7448320_27 1255043.TVNIR_0026 1.3e-26 115.0 COG1669@1|root,COG1669@2|Bacteria,1NMHI@1224|Proteobacteria 1224|Proteobacteria S Nucleotidyltransferase domain - - - - - - - - - - - - NTP_transf_2 HKD3_k127_7448320_23 748658.KB907312_gene1095 1.874e-39 158.0 COG2445@1|root,COG2445@2|Bacteria 2|Bacteria S Protein of unknown function DUF86 - - - - - - - - - - - - DUF86 HKD3_k127_7448320_3 880073.Calab_0806 1.02e-128 419.0 COG1351@1|root,COG1351@2|Bacteria,2NPQ2@2323|unclassified Bacteria 2|Bacteria F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant thyX - 2.1.1.148 ko:K03465 ko00240,ko00670,ko01100,map00240,map00670,map01100 - R06613 RC00022,RC00332 ko00000,ko00001,ko01000 - - - Thy1 HKD3_k127_7448320_32 690850.Desaf_2301 3.855e-09 59.0 COG0695@1|root,COG0695@2|Bacteria,1P8SJ@1224|Proteobacteria,42XTX@68525|delta/epsilon subdivisions,2WXS8@28221|Deltaproteobacteria,2ME3F@213115|Desulfovibrionales 28221|Deltaproteobacteria O Glutaredoxin - - - ko:K03676 - - - - ko00000,ko03110 - - - Glutaredoxin HKD3_k127_7448320_26 324602.Caur_0726 3.647e-29 123.0 COG0824@1|root,COG0824@2|Bacteria,2G7HH@200795|Chloroflexi,377ME@32061|Chloroflexia 32061|Chloroflexia S PFAM thioesterase superfamily protein - - - ko:K07107 - - - - ko00000,ko01000 - - - 4HBT_2 HKD3_k127_7448320_5 404589.Anae109_0137 5.427e-97 330.0 COG0477@1|root,COG2814@2|Bacteria,1MVSH@1224|Proteobacteria,42NA4@68525|delta/epsilon subdivisions,2WNXT@28221|Deltaproteobacteria,2YV4W@29|Myxococcales 28221|Deltaproteobacteria EGP of the major facilitator superfamily agmP - - ko:K08151 - M00668 - - ko00000,ko00002,ko01504,ko02000 2.A.1.2.38,2.A.1.2.39,2.A.1.2.4,2.A.1.2.41,2.A.1.2.68,2.A.1.2.75 - - MFS_1,MFS_1_like,Sugar_tr HKD3_k127_7448320_20 671143.DAMO_2862 7.502e-49 180.0 COG0242@1|root,COG0242@2|Bacteria 2|Bacteria J peptide deformylase activity def2 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 ko:K01462 - - - - ko00000,ko01000 - - - Pep_deformylase HKD3_k127_7448320_18 266117.Rxyl_0013 3.102e-50 186.0 COG1051@1|root,COG1051@2|Bacteria 2|Bacteria F GDP-mannose mannosyl hydrolase activity nudC_1 - 3.6.1.13 ko:K01515 ko00230,map00230 - R01054 RC00002 ko00000,ko00001,ko01000 - - - NUDIX,Nudix_N_2 HKD3_k127_7448320_4 671143.DAMO_2787 9.288e-108 365.0 COG0301@1|root,COG0301@2|Bacteria,2NPBT@2323|unclassified Bacteria 2|Bacteria H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS thiI GO:0000049,GO:0002937,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017144,GO:0018130,GO:0019438,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0042364,GO:0042723,GO:0042724,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.8.1.4 ko:K03151 ko00730,ko01100,ko04122,map00730,map01100,map04122 - R07461 - ko00000,ko00001,ko01000,ko03016 - - iECNA114_1301.ECNA114_0400,iECO26_1355.ECO26_0455,iECSF_1327.ECSF_0383,iSDY_1059.SDY_0307 THUMP,ThiI HKD3_k127_7448320_11 575540.Isop_3497 1.532e-62 234.0 COG3349@1|root,COG3349@2|Bacteria,2IXN4@203682|Planctomycetes 203682|Planctomycetes E TIGRFAM squalene-associated FAD-dependent desaturase - - - - - - - - - - - - Amino_oxidase HKD3_k127_7448320_13 330214.NIDE1520 1.067e-58 225.0 COG1562@1|root,COG1562@2|Bacteria,3J17J@40117|Nitrospirae 40117|Nitrospirae I Squalene/phytoene synthase - - 2.5.1.32,2.5.1.99 ko:K02291 ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110 M00097 R02065,R04218,R07270,R10177 RC00362,RC01101,RC02869 ko00000,ko00001,ko00002,ko01000,ko01006 - - - SQS_PSY HKD3_k127_7448320_8 1123368.AUIS01000001_gene2032 4.627e-70 252.0 COG1562@1|root,COG1562@2|Bacteria,1N6J2@1224|Proteobacteria,1S3EY@1236|Gammaproteobacteria 1236|Gammaproteobacteria I Squalene/phytoene synthase - - - - - - - - - - - - SQS_PSY HKD3_k127_7448320_17 1379270.AUXF01000004_gene3280 1.184e-50 197.0 COG2096@1|root,COG2096@2|Bacteria,1ZT4I@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Cobalamin adenosyltransferase - - 2.5.1.17 ko:K00798 ko00860,ko01100,map00860,map01100 M00122 R01492,R05220,R07268 RC00533 ko00000,ko00001,ko00002,ko01000 - - - Cob_adeno_trans HKD3_k127_7448320_7 330214.NIDE1914 1.262e-85 289.0 COG1194@1|root,COG1194@2|Bacteria,3J160@40117|Nitrospirae 40117|Nitrospirae L FES - - - ko:K03575 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - HhH-GPD HKD3_k127_7448320_29 330214.NIDE1915 1.116e-22 102.0 COG0494@1|root,COG0494@2|Bacteria 2|Bacteria L nUDIX hydrolase mutY - 3.6.1.55 ko:K03574,ko:K03575 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - HhH-GPD,NUDIX,NUDIX_4 HKD3_k127_7448320_21 1297742.A176_05888 5.873e-46 180.0 COG0404@1|root,COG0404@2|Bacteria,1QX3Y@1224|Proteobacteria,43BWD@68525|delta/epsilon subdivisions,2X775@28221|Deltaproteobacteria,2YVVR@29|Myxococcales 28221|Deltaproteobacteria E Glycine cleavage T-protein C-terminal barrel domain - - 2.1.2.10 ko:K00605,ko:K06980 ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200 M00532 R01221,R02300,R04125 RC00022,RC00069,RC00183,RC02834 ko00000,ko00001,ko00002,ko01000,ko03016 - - - GCV_T,GCV_T_C HKD3_k127_7448320_22 1502852.FG94_04425 1.276e-44 183.0 COG1073@1|root,COG1073@2|Bacteria,1R67P@1224|Proteobacteria,2WCMH@28216|Betaproteobacteria,477WK@75682|Oxalobacteraceae 28216|Betaproteobacteria S Serine aminopeptidase, S33 - - - - - - - - - - - - Hydrolase_4 HKD3_k127_7448320_30 1160718.SU9_18800 1.12e-15 80.0 COG1674@1|root,COG1716@1|root,COG1674@2|Bacteria,COG1716@2|Bacteria,2GKQG@201174|Actinobacteria 201174|Actinobacteria DT Forkhead associated domain - - - ko:K03466 - - - - ko00000,ko03036 3.A.12 - - FHA,FtsK_SpoIIIE,Yop-YscD_cpl HKD3_k127_7448320_16 1125863.JAFN01000001_gene1846 6.326e-52 190.0 COG0491@1|root,COG0491@2|Bacteria,1MUDN@1224|Proteobacteria,42QWD@68525|delta/epsilon subdivisions,2WN14@28221|Deltaproteobacteria 28221|Deltaproteobacteria S beta-lactamase domain protein ycbL - - - - - - - - - - - Lactamase_B HKD3_k127_7448320_14 1002340.AFCF01000034_gene3610 2.29e-57 223.0 COG1171@1|root,COG1171@2|Bacteria,1MVWJ@1224|Proteobacteria,2TQN9@28211|Alphaproteobacteria,34ER8@302485|Phaeobacter 28211|Alphaproteobacteria E Pyridoxal-phosphate dependent enzyme eutB - 4.3.1.19 ko:K01754 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230 M00570 R00220,R00996 RC00418,RC02600 ko00000,ko00001,ko00002,ko01000 - - - PALP HKD3_k127_7448320_15 204669.Acid345_1455 1.105e-56 225.0 COG0457@1|root,COG0515@1|root,COG5616@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,COG5616@2|Bacteria,3Y2HR@57723|Acidobacteria,2JI02@204432|Acidobacteriia 204432|Acidobacteriia KLT Tetratricopeptide repeats - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase,TPR_11,TPR_16,TPR_2,Trans_reg_C HKD3_k127_7448320_6 589865.DaAHT2_0467 6.621e-91 317.0 COG0477@1|root,COG2814@2|Bacteria,1QW2F@1224|Proteobacteria,43BTU@68525|delta/epsilon subdivisions,2X74Q@28221|Deltaproteobacteria,2MKZZ@213118|Desulfobacterales 28221|Deltaproteobacteria EGP Transmembrane secretion effector - - - - - - - - - - - - MFS_1,MFS_3 HKD3_k127_7448320_25 215803.DB30_1833 2.365e-29 126.0 COG1595@1|root,COG1595@2|Bacteria,1MX7T@1224|Proteobacteria,42URE@68525|delta/epsilon subdivisions,2WR5V@28221|Deltaproteobacteria,2YY8T@29|Myxococcales 28221|Deltaproteobacteria K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 HKD3_k127_7448320_9 525904.Tter_0097 7.119e-65 228.0 COG0321@1|root,COG0321@2|Bacteria,2NPE7@2323|unclassified Bacteria 2|Bacteria H Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate lipB GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181,2.8.1.8 ko:K03644,ko:K03801 ko00785,ko01100,map00785,map01100 - R07766,R07767,R07768,R07769 RC00039,RC00992,RC01978,RC02867 ko00000,ko00001,ko01000 - - - BPL_LplA_LipB HKD3_k127_7448320_2 204669.Acid345_4350 4.915e-133 439.0 COG0508@1|root,COG0508@2|Bacteria,3Y3CV@57723|Acidobacteria,2JHPY@204432|Acidobacteriia 204432|Acidobacteriia C e3 binding domain - - 2.3.1.61 ko:K00658 ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00032 R02570,R02571,R08549 RC00004,RC02727,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - 2-oxoacid_dh,Biotin_lipoyl,E3_binding HKD3_k127_7448320_28 378806.STAUR_4671 4.46e-26 108.0 COG1249@1|root,COG1249@2|Bacteria,1MU2U@1224|Proteobacteria,42N8Y@68525|delta/epsilon subdivisions,2WIR7@28221|Deltaproteobacteria,2YTYX@29|Myxococcales 28221|Deltaproteobacteria C dihydrolipoamide dehydrogenase lpdA - 1.8.1.4 ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00036,M00307,M00532 R00209,R01221,R01698,R03815,R07618,R08549 RC00004,RC00022,RC00583,RC02742,RC02833,RC02834 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 - - - Pyr_redox_2,Pyr_redox_dim HKD3_k127_7460706_1 861299.J421_0590 1.028e-49 178.0 COG2337@1|root,COG2337@2|Bacteria 2|Bacteria T Toxic component of a toxin-antitoxin (TA) module - - - ko:K07171 - - - - ko00000,ko01000,ko02048 - - - PemK_toxin HKD3_k127_7460706_3 234267.Acid_0036 2.046e-19 106.0 COG2304@1|root,COG2304@2|Bacteria,3Y3DR@57723|Acidobacteria 57723|Acidobacteria S oxidoreductase activity - - - - - - - - - - - - - HKD3_k127_7460706_0 880073.Calab_0341 1.208e-205 646.0 COG2986@1|root,COG2986@2|Bacteria,2NQHF@2323|unclassified Bacteria 2|Bacteria E Aromatic amino acid lyase hutH - 4.3.1.3 ko:K01745 ko00340,ko01100,map00340,map01100 M00045 R01168 RC00361 ko00000,ko00001,ko00002,ko01000 - - - Lyase_aromatic HKD3_k127_7467236_13 880072.Desac_0010 5.881e-21 96.0 COG0044@1|root,COG0044@2|Bacteria,1MVXY@1224|Proteobacteria,42MJ9@68525|delta/epsilon subdivisions,2WJH8@28221|Deltaproteobacteria,2MQ49@213462|Syntrophobacterales 28221|Deltaproteobacteria F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily pyrC GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 ko:K01465 ko00240,ko01100,map00240,map01100 M00051 R01993 RC00632 ko00000,ko00001,ko00002,ko01000 - - - Amidohydro_1 HKD3_k127_7467236_1 292459.STH1257 7.039e-125 407.0 COG0540@1|root,COG0540@2|Bacteria,1TQ96@1239|Firmicutes,2496D@186801|Clostridia 186801|Clostridia F Belongs to the ATCase OTCase family pyrB - 2.1.3.2 ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R01397 RC00064,RC02850 ko00000,ko00001,ko00002,ko01000 - - - OTCace,OTCace_N HKD3_k127_7467236_6 1121468.AUBR01000026_gene2950 5.111e-69 241.0 COG2065@1|root,COG2065@2|Bacteria,1V3GV@1239|Firmicutes,24FQD@186801|Clostridia,42G0W@68295|Thermoanaerobacterales 186801|Clostridia F Belongs to the purine pyrimidine phosphoribosyltransferase family. PyrR subfamily pyrR - 2.4.2.9 ko:K02825 ko00240,ko01100,map00240,map01100 - R00966 RC00063 ko00000,ko00001,ko01000,ko03000 - - iHN637.CLJU_RS05275 Pribosyltran HKD3_k127_7467236_11 1047013.AQSP01000028_gene2076 4.895e-35 153.0 COG3379@1|root,COG3379@2|Bacteria 2|Bacteria S Type I phosphodiesterase / nucleotide pyrophosphatase - - - - - - - - - - - - Phosphodiest,Sulfotransfer_1,TPR_16,TPR_19 HKD3_k127_7467236_9 338966.Ppro_2630 3.304e-54 200.0 COG0543@1|root,COG0543@2|Bacteria,1RF43@1224|Proteobacteria,42RQK@68525|delta/epsilon subdivisions,2WNJU@28221|Deltaproteobacteria,43U15@69541|Desulfuromonadales 28221|Deltaproteobacteria C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( ) pyrK - - ko:K02823 ko00240,ko01100,map00240,map01100 - - - ko00000,ko00001 - - - DHODB_Fe-S_bind,FAD_binding_6,NAD_binding_1 HKD3_k127_7467236_4 203275.BFO_0020 2.05e-102 354.0 COG0167@1|root,COG0167@2|Bacteria,4NDVB@976|Bacteroidetes,2FPMW@200643|Bacteroidia,22XED@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily pyrD GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.98.1 ko:K00226,ko:K17828 ko00240,ko01100,map00240,map01100 M00051 R01867,R01869 RC00051 ko00000,ko00001,ko00002,ko01000 - - - DHO_dh HKD3_k127_7467236_7 370438.PTH_1805 2.177e-57 218.0 COG0284@1|root,COG0284@2|Bacteria,1TPPH@1239|Firmicutes,24DII@186801|Clostridia,261JP@186807|Peptococcaceae 186801|Clostridia F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) pyrF - 4.1.1.23 ko:K01591 ko00240,ko01100,map00240,map01100 M00051 R00965 RC00409 ko00000,ko00001,ko00002,ko01000 - - - OMPdecase HKD3_k127_7467236_12 1047013.AQSP01000135_gene1612 3.806e-32 134.0 COG2885@1|root,COG2885@2|Bacteria,2NPMV@2323|unclassified Bacteria 2|Bacteria M OmpA family pal - - ko:K03640 - - - - ko00000,ko02000 2.C.1.2 - - OmpA HKD3_k127_7467236_10 383372.Rcas_3055 7.664e-37 150.0 COG0500@1|root,COG2226@2|Bacteria,2G9CY@200795|Chloroflexi,375EP@32061|Chloroflexia 32061|Chloroflexia Q Methyltransferase type 12 - - - - - - - - - - - - Methyltransf_11 HKD3_k127_7467236_14 479434.Sthe_0808 3.597e-14 87.0 COG1807@1|root,COG1807@2|Bacteria,2GBE9@200795|Chloroflexi,27Z44@189775|Thermomicrobia 2|Bacteria M Protein of unknown function (DUF2723) - - - - - - - - - - - - PMT_2 HKD3_k127_7467236_5 1125863.JAFN01000001_gene1414 8.356e-88 298.0 COG1606@1|root,COG1606@2|Bacteria,1R7UZ@1224|Proteobacteria,42Q6V@68525|delta/epsilon subdivisions,2WKIM@28221|Deltaproteobacteria 28221|Deltaproteobacteria S PFAM asparagine synthase - - - ko:K06864 - - - - ko00000 - - - Asn_synthase,NAD_synthase,QueC HKD3_k127_7467236_15 401053.AciPR4_0456 4.826e-09 59.0 arCOG13401@1|root,33MMV@2|Bacteria,3Y5TE@57723|Acidobacteria,2JNR5@204432|Acidobacteriia 204432|Acidobacteriia - - - - - ko:K05826 - M00031,M00763 - - ko00000,ko00001,ko00002 - - - - HKD3_k127_7467236_16 404589.Anae109_2205 8.476e-08 62.0 COG4567@1|root,COG4567@2|Bacteria,1RD7J@1224|Proteobacteria,42UKS@68525|delta/epsilon subdivisions,2WQV2@28221|Deltaproteobacteria 28221|Deltaproteobacteria T response regulator - - - ko:K15012 ko02020,map02020 M00523 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg HKD3_k127_7467236_2 479434.Sthe_1848 1.351e-116 389.0 COG1253@1|root,COG1253@2|Bacteria,2G6DE@200795|Chloroflexi,27YYU@189775|Thermomicrobia 189775|Thermomicrobia S Transporter associated domain - - - - - - - - - - - - CBS,CorC_HlyC,DUF21 HKD3_k127_7467236_0 1304878.AUGD01000037_gene5396 1.162e-183 598.0 COG2217@1|root,COG2608@1|root,COG2217@2|Bacteria,COG2608@2|Bacteria,1MU08@1224|Proteobacteria,2TR56@28211|Alphaproteobacteria,3JRCG@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria P E1-E2 ATPase cadA - 3.6.3.3,3.6.3.5 ko:K01534 - - - - ko00000,ko01000 3.A.3.6 - - E1-E2_ATPase,Hydrolase HKD3_k127_7467236_3 234267.Acid_4515 1.033e-107 357.0 COG1131@1|root,COG1131@2|Bacteria,3Y6FZ@57723|Acidobacteria 57723|Acidobacteria V ABC transporter - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_7467236_8 1382359.JIAL01000001_gene1268 1.321e-56 218.0 COG1277@1|root,COG1277@2|Bacteria,3Y6D0@57723|Acidobacteria 57723|Acidobacteria S ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_2 HKD3_k127_7483156_1 861299.J421_2845 1.96e-37 162.0 COG0823@1|root,COG4775@1|root,COG0823@2|Bacteria,COG4775@2|Bacteria,1ZSWP@142182|Gemmatimonadetes 142182|Gemmatimonadetes MU WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 HKD3_k127_7483156_0 1379698.RBG1_1C00001G0708 1.458e-48 182.0 COG0010@1|root,COG0010@2|Bacteria,2NPGU@2323|unclassified Bacteria 2|Bacteria E Arginase family speB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 3.5.3.11 ko:K01480 ko00330,ko01100,map00330,map01100 M00133 R01157 RC00024,RC00329 ko00000,ko00001,ko00002,ko01000 - - - Arginase HKD3_k127_7490658_4 1121920.AUAU01000007_gene506 7.686e-127 410.0 COG0477@1|root,COG2814@2|Bacteria,3Y6YQ@57723|Acidobacteria 57723|Acidobacteria EGP Major Facilitator Superfamily - - - - - - - - - - - - MFS_1 HKD3_k127_7490658_1 1047013.AQSP01000113_gene739 2.59e-222 715.0 COG4868@1|root,COG4868@2|Bacteria,2NQM9@2323|unclassified Bacteria 2|Bacteria S Domain of unknown function (DUF1846) XK27_07020 - - - - - - - - - - - DUF1846 HKD3_k127_7490658_2 452637.Oter_2107 2.647e-211 666.0 COG0034@1|root,COG0034@2|Bacteria,46SSU@74201|Verrucomicrobia 74201|Verrucomicrobia F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine purF - 2.4.2.14 ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048 R01072 RC00010,RC02724,RC02752 ko00000,ko00001,ko00002,ko01000,ko01002 - - - GATase_7 HKD3_k127_7490658_0 234267.Acid_5423 6.38e-236 738.0 COG1838@1|root,COG1951@1|root,COG1838@2|Bacteria,COG1951@2|Bacteria,3Y4NM@57723|Acidobacteria 57723|Acidobacteria C Fumarate hydratase (Fumerase) - - 4.2.1.2 ko:K01676 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00173,M00374 R01082 RC00443 ko00000,ko00001,ko00002,ko01000 - - - Fumerase HKD3_k127_7490658_5 247490.KSU1_B0196 1.058e-42 165.0 COG4798@1|root,COG4798@2|Bacteria,2J4ZF@203682|Planctomycetes 203682|Planctomycetes S Methyltransferase domain - - - - - - - - - - - - Methyltransf_31 HKD3_k127_7490658_6 292459.STH3180 1.737e-32 136.0 COG0314@1|root,COG1977@1|root,COG0314@2|Bacteria,COG1977@2|Bacteria,1V3V0@1239|Firmicutes,24QVX@186801|Clostridia 186801|Clostridia H Molybdopterin converting factor subunit - - 2.8.1.12 ko:K03635,ko:K21142 ko00790,ko01100,ko04122,map00790,map01100,map04122 - R09395 RC02507 ko00000,ko00001,ko01000 - - - MoaE,ThiS HKD3_k127_7490658_7 1128421.JAGA01000002_gene1039 6.607e-13 71.0 COG0314@1|root,COG1977@1|root,COG0314@2|Bacteria,COG1977@2|Bacteria,2NR4E@2323|unclassified Bacteria 2|Bacteria H MoaE protein moaD GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016782,GO:0016783,GO:0018130,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0030366,GO:0032324,GO:0034641,GO:0042278,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.7.7.77,2.8.1.12,4.6.1.17 ko:K03635,ko:K03636,ko:K03637,ko:K03752,ko:K21142 ko00790,ko01100,ko04122,map00790,map01100,map04122 - R09395,R11372,R11581 RC02507,RC03425 ko00000,ko00001,ko01000 - - iE2348C_1286.E2348C_0736,iEC55989_1330.EC55989_0827,iG2583_1286.G2583_1012,iLF82_1304.LF82_1368,iNRG857_1313.NRG857_03495,iSFV_1184.SFV_0767,iSF_1195.SF0734,iSFxv_1172.SFxv_0800,iSSON_1240.SSON_0763,iS_1188.S0775 MoaE,ThiS HKD3_k127_7490658_3 289376.THEYE_A0369 2.89e-143 464.0 COG0216@1|root,COG0216@2|Bacteria,3J0F6@40117|Nitrospirae 40117|Nitrospirae J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA prfA - - ko:K02835 - - - - ko00000,ko03012 - - - PCRF,RF-1 HKD3_k127_7519687_3 204669.Acid345_3426 3.747e-141 462.0 COG0646@1|root,COG0685@1|root,COG0646@2|Bacteria,COG0685@2|Bacteria,3Y3YD@57723|Acidobacteria,2JIG8@204432|Acidobacteriia 204432|Acidobacteriia E homocysteine S-methyltransferase - - 1.5.1.20,2.1.1.10 ko:K00297,ko:K00547 ko00270,ko00670,ko00720,ko01100,ko01110,ko01120,ko01200,ko01523,map00270,map00670,map00720,map01100,map01110,map01120,map01200,map01523 M00377 R00650,R01224,R07168 RC00003,RC00035,RC00081 ko00000,ko00001,ko00002,ko01000 - - - MTHFR,S-methyl_trans HKD3_k127_7519687_0 215803.DB30_8886 9.359e-240 790.0 COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,43C3Q@68525|delta/epsilon subdivisions 1224|Proteobacteria V AcrB/AcrD/AcrF family - - - ko:K07787 ko02020,map02020 - - - ko00000,ko00001,ko02000 2.A.6.1.4 - - ACR_tran HKD3_k127_7519687_5 1121015.N789_13675 2.097e-30 134.0 COG0845@1|root,COG0845@2|Bacteria,1MUFW@1224|Proteobacteria,1RQJ9@1236|Gammaproteobacteria,1X3WY@135614|Xanthomonadales 135614|Xanthomonadales M Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - - - - - - - - - - HlyD_D23 HKD3_k127_7519687_6 1149133.ppKF707_5274 2.485e-30 135.0 COG1538@1|root,COG1538@2|Bacteria,1NEZC@1224|Proteobacteria,1RZB6@1236|Gammaproteobacteria,1YFE8@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria MU Outer membrane efflux protein czcC - - ko:K15725 - - - - ko00000,ko02000 1.B.17.2.2 - - OEP HKD3_k127_7519687_4 1278073.MYSTI_00915 9.607e-101 339.0 COG4447@1|root,COG4447@2|Bacteria,1N3YV@1224|Proteobacteria 1224|Proteobacteria S cellulose binding - - - - - - - - - - - - PSII_BNR HKD3_k127_7519687_2 330214.NIDE3598 6.718e-144 462.0 COG0702@1|root,COG0702@2|Bacteria 2|Bacteria GM epimerase - - - - - - - - - - - - NmrA HKD3_k127_7519687_1 1379270.AUXF01000002_gene1760 5.516e-237 784.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,1ZU9M@142182|Gemmatimonadetes 142182|Gemmatimonadetes EU Serine hydrolase (FSH1) - - - - - - - - - - - - PD40,Peptidase_S9 HKD3_k127_7557519_0 744872.Spica_0555 0.0 1270.0 COG1924@1|root,COG3580@1|root,COG3581@1|root,COG1924@2|Bacteria,COG3580@2|Bacteria,COG3581@2|Bacteria,2J5ZA@203691|Spirochaetes 203691|Spirochaetes I CoA-substrate-specific enzyme activase - - - - - - - - - - - - BcrAD_BadFG,DUF2229 HKD3_k127_7557519_4 1121405.dsmv_2218 2.528e-140 466.0 COG1960@1|root,COG1960@2|Bacteria,1NU73@1224|Proteobacteria,42Z96@68525|delta/epsilon subdivisions,2WTTK@28221|Deltaproteobacteria,2MN2J@213118|Desulfobacterales 28221|Deltaproteobacteria I Acyl-CoA dehydrogenase, C-terminal domain - - - - - - - - - - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N HKD3_k127_7557519_3 926569.ANT_13690 2.28e-218 688.0 COG2407@1|root,COG2407@2|Bacteria,2G84V@200795|Chloroflexi 200795|Chloroflexi G L-fucose isomerase, C-terminal domain - - - - - - - - - - - - Fucose_iso_C HKD3_k127_7557519_2 452637.Oter_1383 3.545e-228 722.0 COG1069@1|root,COG1069@2|Bacteria,46UI3@74201|Verrucomicrobia,3K769@414999|Opitutae 414999|Opitutae G FGGY family of carbohydrate kinases, C-terminal domain - - 2.7.1.16 ko:K00853 ko00040,ko01100,map00040,map01100 - R01526,R02439 RC00002,RC00538 ko00000,ko00001,ko01000 - - - FGGY_C,FGGY_N HKD3_k127_7557519_8 518766.Rmar_0470 9.762e-77 264.0 COG0235@1|root,COG0235@2|Bacteria,4NGMP@976|Bacteroidetes 976|Bacteroidetes G Pfam Class II Aldolase and Adducin N-terminal domain araD - 5.1.3.4 ko:K03077 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 M00550 R05850 RC01479 ko00000,ko00001,ko00002,ko01000 - - - Aldolase_II HKD3_k127_7557519_5 572479.Hprae_0459 5.892e-140 466.0 COG4690@1|root,COG4690@2|Bacteria,1TQ0F@1239|Firmicutes,248K3@186801|Clostridia 186801|Clostridia E Dipeptidase pepD - - ko:K08659 - - - - ko00000,ko01000,ko01002 - - - Peptidase_C69 HKD3_k127_7557519_6 1444711.CCJF01000004_gene2102 9.8e-135 449.0 COG2939@1|root,COG2939@2|Bacteria,2JFP4@204428|Chlamydiae 204428|Chlamydiae E Serine carboxypeptidase - - - - - - - - - - - - Peptidase_S10 HKD3_k127_7557519_13 933262.AXAM01000011_gene1792 8.978e-07 54.0 COG4118@1|root,COG4118@2|Bacteria 2|Bacteria D positive regulation of growth - GO:0008150,GO:0040008,GO:0045927,GO:0048518,GO:0050789,GO:0065007 - - - - - - - - - - PhdYeFM_antitox HKD3_k127_7557519_7 584708.Apau_2293 5.74e-111 382.0 COG0514@1|root,COG0514@2|Bacteria,3TAMF@508458|Synergistetes 508458|Synergistetes L ATP-dependent DNA helicase RecQ - - - - - - - - - - - - DEAD,HRDC,Helicase_C,RQC,RecQ_Zn_bind HKD3_k127_7557519_11 215803.DB30_3755 1.519e-37 151.0 COG0454@1|root,COG0456@2|Bacteria,1N2EC@1224|Proteobacteria,437FF@68525|delta/epsilon subdivisions,2X2N2@28221|Deltaproteobacteria,2YZX8@29|Myxococcales 28221|Deltaproteobacteria K FR47-like protein - - - - - - - - - - - - Acetyltransf_1 HKD3_k127_7557519_9 1121920.AUAU01000008_gene1542 1.388e-59 216.0 COG2267@1|root,COG2267@2|Bacteria,3Y9C5@57723|Acidobacteria 57723|Acidobacteria I Serine aminopeptidase, S33 - - - - - - - - - - - - Abhydrolase_1 HKD3_k127_7557519_12 926549.KI421517_gene2983 4.86e-17 93.0 29XKX@1|root,30JC5@2|Bacteria,4P6BI@976|Bacteroidetes,47WP4@768503|Cytophagia 976|Bacteroidetes S Pfam:DUF2029 - - - - - - - - - - - - GT87 HKD3_k127_7557519_1 1047013.AQSP01000142_gene185 0.0 1217.0 COG4447@1|root,COG4447@2|Bacteria,2NQ6W@2323|unclassified Bacteria 2|Bacteria S Por secretion system C-terminal sorting domain-containing protein - - - - - - - - - - - - BNR,Sortilin-Vps10 HKD3_k127_7557519_10 1120956.JHZK01000001_gene3184 2.689e-56 207.0 COG3005@1|root,COG3005@2|Bacteria,1R4UP@1224|Proteobacteria,2TZ0I@28211|Alphaproteobacteria 28211|Alphaproteobacteria C Cytochrome c3 - - - - - - - - - - - - Paired_CXXCH_1 HKD3_k127_7619839_6 234267.Acid_3719 2.796e-100 331.0 COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,3Y3BP@57723|Acidobacteria 57723|Acidobacteria M Tricorn protease homolog - - - ko:K08676 - - - - ko00000,ko01000,ko01002 - - - PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ HKD3_k127_7619839_0 331869.BAL199_13628 3.76e-301 940.0 COG0507@1|root,COG0507@2|Bacteria,1MW43@1224|Proteobacteria,2TQWC@28211|Alphaproteobacteria,4BRQS@82117|unclassified Alphaproteobacteria 28211|Alphaproteobacteria L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity recD2 - 3.1.11.5 ko:K01144,ko:K03581 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - AAA_30,HHH_4,HHH_5,UvrD_C_2 HKD3_k127_7619839_8 1519464.HY22_01680 3.581e-18 96.0 COG0612@1|root,COG0612@2|Bacteria,1FENV@1090|Chlorobi 1090|Chlorobi S Peptidase M16 inactive domain - - - - - - - - - - - - Peptidase_M16,Peptidase_M16_C HKD3_k127_7619839_7 1408473.JHXO01000001_gene2057 9.501e-76 267.0 COG1409@1|root,COG1409@2|Bacteria,4NPFR@976|Bacteroidetes,2G2Q5@200643|Bacteroidia 976|Bacteroidetes S Calcineurin-like phosphoesterase superfamily domain - - - - - - - - - - - - Metallophos HKD3_k127_7619839_4 929556.Solca_1540 3.649e-184 619.0 COG0383@1|root,COG0383@2|Bacteria,4NGF5@976|Bacteroidetes,1IPJQ@117747|Sphingobacteriia 976|Bacteroidetes G Glycosyl hydrolases family 38 N-terminal domain - - - - - - - - - - - - Glyco_hydro_38,Glyco_hydro_38C HKD3_k127_7619839_3 234267.Acid_4619 1.511e-230 737.0 COG0531@1|root,COG0531@2|Bacteria,3Y2RG@57723|Acidobacteria 57723|Acidobacteria E Amino acid permease - - - - - - - - - - - - AA_permease_2 HKD3_k127_7619839_5 1382359.JIAL01000001_gene959 5.021e-133 434.0 COG0642@1|root,COG2205@2|Bacteria,3Y33Y@57723|Acidobacteria,2JHWF@204432|Acidobacteriia 204432|Acidobacteriia T Osmosensitive K channel His kinase sensor - - 2.7.13.3 ko:K07646 ko02020,map02020 M00454 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - KdpD,Usp HKD3_k127_7619839_1 204669.Acid345_0510 2.438e-269 839.0 COG2060@1|root,COG2060@2|Bacteria,3Y2YP@57723|Acidobacteria,2JIFM@204432|Acidobacteriia 204432|Acidobacteriia P Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane kdpA - 3.6.3.12 ko:K01546 ko02020,map02020 - - - ko00000,ko00001,ko01000 3.A.3.7 - - KdpA HKD3_k127_7619839_2 682795.AciX8_0330 1.695e-258 836.0 COG2216@1|root,COG2216@2|Bacteria,3Y302@57723|Acidobacteria,2JHQI@204432|Acidobacteriia 204432|Acidobacteriia P Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system kdpB - 3.6.3.12 ko:K01547 ko02020,map02020 - - - ko00000,ko00001,ko01000 3.A.3.7 - - E1-E2_ATPase,Hydrolase HKD3_k127_7678591_1 639030.JHVA01000001_gene2292 1.949e-82 286.0 COG0415@1|root,COG0415@2|Bacteria,3Y31R@57723|Acidobacteria,2JHWQ@204432|Acidobacteriia 204432|Acidobacteriia L PFAM DNA photolyase, FAD-binding - - 4.1.99.3 ko:K01669 - - - - ko00000,ko01000,ko03400 - - - DNA_photolyase,FAD_binding_7 HKD3_k127_7678591_4 1304883.KI912532_gene360 6.008e-39 158.0 COG0789@1|root,COG5012@1|root,COG0789@2|Bacteria,COG5012@2|Bacteria,1R2NF@1224|Proteobacteria,2VJDG@28216|Betaproteobacteria,2KW35@206389|Rhodocyclales 206389|Rhodocyclales K B12 binding domain - - - ko:K22491 - - - - ko00000,ko03000 - - - B12-binding,B12-binding_2,MerR_1 HKD3_k127_7678591_2 530564.Psta_4322 1.111e-54 199.0 COG2335@1|root,COG2335@2|Bacteria,2IZDI@203682|Planctomycetes 203682|Planctomycetes M COG2335 Secreted and surface protein containing fasciclin-like repeats - - - - - - - - - - - - Fasciclin HKD3_k127_7678591_0 903818.KI912268_gene1318 1.898e-178 572.0 COG0702@1|root,COG0702@2|Bacteria,3Y7DF@57723|Acidobacteria 57723|Acidobacteria GM Protein of unknown function (DUF2867) - - - - - - - - - - - - DUF2867,NAD_binding_10 HKD3_k127_7678591_3 518766.Rmar_1764 4.137e-51 193.0 COG3408@1|root,COG3408@2|Bacteria,4PJ05@976|Bacteroidetes,1FJS7@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - - - - - - - - - - - HKD3_k127_7741997_0 1121481.AUAS01000007_gene1195 2.78e-93 328.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NHS5@976|Bacteroidetes,47MWY@768503|Cytophagia 976|Bacteroidetes EU Peptidase S9 prolyl oligopeptidase active site domain protein - - 3.4.19.1 ko:K01303 - - - - ko00000,ko01000,ko01002 - - - PD40,Peptidase_S9 HKD3_k127_7742429_4 926560.KE387025_gene4063 7.688e-48 178.0 COG0317@1|root,COG0317@2|Bacteria,1WMN8@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus KT HD domain - - - - - - - - - - - - HD_4 HKD3_k127_7742429_6 471854.Dfer_0264 1.36e-16 94.0 COG4733@1|root,COG4733@2|Bacteria,4NK2V@976|Bacteroidetes,47P6C@768503|Cytophagia 976|Bacteroidetes G PFAM Fibronectin type III domain - - - - - - - - - - - - fn3 HKD3_k127_7742429_0 237368.SCABRO_03229 1.361e-120 415.0 COG3291@1|root,COG4733@1|root,COG3291@2|Bacteria,COG4733@2|Bacteria 2|Bacteria S cellulase activity - - - - - - - - - - - - CBM_6,Laminin_G_3,PKD,PPC,Phage-tail_3,Reprolysin_3,fn3 HKD3_k127_7742429_1 234267.Acid_6537 2.326e-111 381.0 COG1073@1|root,COG1073@2|Bacteria,3Y6M5@57723|Acidobacteria 57723|Acidobacteria S alpha beta - - - - - - - - - - - - - HKD3_k127_7742429_3 1120966.AUBU01000005_gene3545 3.055e-74 275.0 COG0520@1|root,COG0520@2|Bacteria,4NF4G@976|Bacteroidetes,47M48@768503|Cytophagia 976|Bacteroidetes E Aminotransferase class-V - - - - - - - - - - - - Aminotran_5 HKD3_k127_7742429_5 1210884.HG799463_gene9933 1.83e-46 178.0 COG0596@1|root,COG0596@2|Bacteria,2J4WT@203682|Planctomycetes 203682|Planctomycetes S Serine aminopeptidase, S33 - - - - - - - - - - - - - HKD3_k127_7742429_2 251221.35212674 9.477e-108 360.0 COG0265@1|root,COG0265@2|Bacteria,1G3M4@1117|Cyanobacteria 1117|Cyanobacteria O Domain present in PSD-95, Dlg, and ZO-1/2. - - - - - - - - - - - - PDZ_2,Trypsin_2 HKD3_k127_7746588_2 1121920.AUAU01000011_gene220 5.939e-165 536.0 COG3104@1|root,COG3104@2|Bacteria 2|Bacteria E oligopeptide transport - - - ko:K03305 - - - - ko00000 2.A.17 - - MFS_1,PTR2 HKD3_k127_7746588_0 671143.DAMO_1249 1.469e-251 806.0 COG1615@1|root,COG1615@2|Bacteria,2NQSF@2323|unclassified Bacteria 2|Bacteria S Uncharacterised protein family (UPF0182) - GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - ko:K09118 - - - - ko00000 - - - UPF0182 HKD3_k127_7746588_5 443143.GM18_3375 1.039e-48 198.0 COG2206@1|root,COG2206@2|Bacteria,1MW7F@1224|Proteobacteria,42PHB@68525|delta/epsilon subdivisions,2WMJX@28221|Deltaproteobacteria,43S0A@69541|Desulfuromonadales 28221|Deltaproteobacteria T PFAM metal-dependent phosphohydrolase HD sub domain - - - - - - - - - - - - HD,HD_5,KOW HKD3_k127_7746588_3 1047013.AQSP01000052_gene2598 2.166e-161 524.0 COG1760@1|root,COG1760@2|Bacteria,2NQRY@2323|unclassified Bacteria 2|Bacteria E Serine dehydratase alpha chain - - 4.3.1.17 ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 - R00220,R00590 RC00331,RC02600 ko00000,ko00001,ko01000 - - - SDH_alpha,SDH_beta HKD3_k127_7746588_6 518766.Rmar_0611 1.132e-41 162.0 COG1376@1|root,COG1376@2|Bacteria,4P35B@976|Bacteroidetes 976|Bacteroidetes S L,D-transpeptidase catalytic domain - - - - - - - - - - - - YkuD HKD3_k127_7746588_4 518766.Rmar_0610 1.479e-54 207.0 COG3034@1|root,COG3034@2|Bacteria,4NU5W@976|Bacteroidetes 976|Bacteroidetes M L,D-transpeptidase catalytic domain - - - - - - - - - - - - YkuD HKD3_k127_7746588_8 927658.AJUM01000034_gene468 2.959e-12 75.0 2FFT5@1|root,347QA@2|Bacteria,4P5W2@976|Bacteroidetes 976|Bacteroidetes - - - - - - - - - - - - - - DUF4398 HKD3_k127_7746588_7 234267.Acid_4150 8.307e-20 89.0 COG0607@1|root,32YCZ@2|Bacteria,3Y5Z1@57723|Acidobacteria 57723|Acidobacteria P Protein of unknown function (DUF2892) - - - - - - - - - - - - DUF2892 HKD3_k127_7746588_9 404589.Anae109_4087 6.591e-12 74.0 COG0589@1|root,COG0589@2|Bacteria,1RA7K@1224|Proteobacteria,42V2P@68525|delta/epsilon subdivisions,2WRFB@28221|Deltaproteobacteria 28221|Deltaproteobacteria T Universal stress protein - - - - - - - - - - - - Usp HKD3_k127_7746588_1 395961.Cyan7425_2047 1.403e-220 702.0 COG0841@1|root,COG0841@2|Bacteria,1G21T@1117|Cyanobacteria,3KH9Q@43988|Cyanothece 1117|Cyanobacteria V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ACR_tran HKD3_k127_7748720_2 234267.Acid_7510 1.457e-189 622.0 COG1629@1|root,COG4771@2|Bacteria,3Y3KA@57723|Acidobacteria 57723|Acidobacteria P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg HKD3_k127_7748720_0 760192.Halhy_5869 3.848e-199 630.0 COG0673@1|root,COG0673@2|Bacteria,4NHDS@976|Bacteroidetes,1IQ1R@117747|Sphingobacteriia 976|Bacteroidetes S Oxidoreductase domain protein - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C HKD3_k127_7748720_3 290397.Adeh_0338 1.926e-138 460.0 COG3829@1|root,COG3829@2|Bacteria,1NU8B@1224|Proteobacteria,42M2E@68525|delta/epsilon subdivisions,2WKAB@28221|Deltaproteobacteria,2YWDZ@29|Myxococcales 28221|Deltaproteobacteria K Transcriptional regulator, Fis family - - - - - - - - - - - - HTH_8,Sigma54_activat,V4R,XylR_N HKD3_k127_7748720_6 382464.ABSI01000010_gene3242 1.053e-52 197.0 COG1913@1|root,COG1913@2|Bacteria,46WX0@74201|Verrucomicrobia,2IVPQ@203494|Verrucomicrobiae 203494|Verrucomicrobiae S Peptidase family M54 - - - - - - - - - - - - Peptidase_M54 HKD3_k127_7748720_5 1267533.KB906738_gene2071 1.492e-113 376.0 COG0535@1|root,COG0535@2|Bacteria,3Y3TY@57723|Acidobacteria,2JM20@204432|Acidobacteriia 204432|Acidobacteriia S 4Fe-4S single cluster domain - - - - - - - - - - - - Fer4_12,Radical_SAM HKD3_k127_7748720_4 861299.J421_0779 2.718e-117 404.0 COG0652@1|root,COG0652@2|Bacteria,1ZTYX@142182|Gemmatimonadetes 142182|Gemmatimonadetes O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides - - 5.2.1.8 ko:K03768 - - - - ko00000,ko01000,ko03110 - - - Pro_isomerase HKD3_k127_7748720_1 497964.CfE428DRAFT_1254 4.093e-198 627.0 COG4581@1|root,COG4581@2|Bacteria,46STC@74201|Verrucomicrobia 74201|Verrucomicrobia L DEAD DEAH box helicase - - - - - - - - - - - - DEAD,DUF3516,Helicase_C HKD3_k127_7754605_0 987059.RBXJA2T_04763 3.131e-43 161.0 COG0346@1|root,COG0346@2|Bacteria,1N1D4@1224|Proteobacteria,2WE8C@28216|Betaproteobacteria 28216|Betaproteobacteria E glyoxalase bleomycin resistance protein dioxygenase - - - - - - - - - - - - Glyoxalase HKD3_k127_7754605_2 1348657.M622_17275 2.159e-30 126.0 COG1278@1|root,COG1278@2|Bacteria,1N6Q5@1224|Proteobacteria,2VV0X@28216|Betaproteobacteria,2KZUI@206389|Rhodocyclales 206389|Rhodocyclales K Cold shock protein domain - - - ko:K03704 - - - - ko00000,ko03000 - - - CSD HKD3_k127_7754605_1 62928.azo2602 3.335e-39 148.0 COG0361@1|root,COG0361@2|Bacteria,1MZFU@1224|Proteobacteria,2VU4I@28216|Betaproteobacteria,2KWYD@206389|Rhodocyclales 206389|Rhodocyclales J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex - - - ko:K02518 - - - - ko00000,ko03012 - - - eIF-1a HKD3_k127_7754605_3 264198.Reut_B4212 1.53e-20 102.0 COG0664@1|root,COG0664@2|Bacteria,1MVGE@1224|Proteobacteria,2W0HP@28216|Betaproteobacteria,1KC4V@119060|Burkholderiaceae 28216|Betaproteobacteria K helix_turn_helix, cAMP Regulatory protein - - - ko:K01420 - - - - ko00000,ko03000 - - - HTH_Crp_2,cNMP_binding HKD3_k127_7754605_4 1217710.F969_02006 6.2e-10 64.0 COG4166@1|root,COG4166@2|Bacteria,1R87R@1224|Proteobacteria,1S4M3@1236|Gammaproteobacteria,3NKR5@468|Moraxellaceae 1236|Gammaproteobacteria E Bacterial extracellular solute-binding proteins, family 5 Middle hbpA - - - - - - - - - - - SBP_bac_5 HKD3_k127_7759757_3 398767.Glov_1237 3.797e-22 97.0 COG0777@1|root,COG0777@2|Bacteria,1MW8G@1224|Proteobacteria,42MAB@68525|delta/epsilon subdivisions,2WP9B@28221|Deltaproteobacteria,43U3E@69541|Desulfuromonadales 28221|Deltaproteobacteria I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA accD - 2.1.3.15,6.4.1.2 ko:K01963 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04386 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 - - - Carboxyl_trans HKD3_k127_7759757_1 671143.DAMO_2311 5.797e-62 223.0 COG1428@1|root,COG1428@2|Bacteria,2NPEH@2323|unclassified Bacteria 2|Bacteria F Deoxynucleoside kinase dgk - 2.7.1.113 ko:K15518 ko00230,map00230 - R01967 RC00002,RC00017 ko00000,ko00001,ko01000 - - - HPPK,dNK HKD3_k127_7759757_0 204669.Acid345_2187 1.104e-122 403.0 COG4948@1|root,COG4948@2|Bacteria,3Y2QQ@57723|Acidobacteria,2JITG@204432|Acidobacteriia 204432|Acidobacteriia M Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) menC - 4.2.1.113 ko:K02549 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R04031 RC01053 ko00000,ko00001,ko00002,ko01000 - - - MR_MLE_C,MR_MLE_N HKD3_k127_7759757_2 1278073.MYSTI_05126 1.376e-49 203.0 COG0652@1|root,COG1413@1|root,COG0652@2|Bacteria,COG1413@2|Bacteria,1R4KH@1224|Proteobacteria,42R08@68525|delta/epsilon subdivisions,2WWSG@28221|Deltaproteobacteria,2YVBS@29|Myxococcales 28221|Deltaproteobacteria M Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD - - 5.2.1.8 ko:K03768 - - - - ko00000,ko01000,ko03110 - - - HEAT_2,Pro_isomerase HKD3_k127_7762638_2 1379270.AUXF01000003_gene3435 7.951e-83 283.0 COG1209@1|root,COG1209@2|Bacteria,1ZUDP@142182|Gemmatimonadetes 142182|Gemmatimonadetes M Nucleotidyl transferase - - 2.7.7.24 ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 M00793 R02328 RC00002 ko00000,ko00001,ko00002,ko01000 - - - NTP_transferase HKD3_k127_7762638_1 1379270.AUXF01000003_gene3436 2.173e-101 357.0 COG0153@1|root,COG0153@2|Bacteria,1ZU6F@142182|Gemmatimonadetes 142182|Gemmatimonadetes G Belongs to the GHMP kinase family galK - 2.7.1.6 ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00554,M00632 R01092 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko04147 - - - GHMP_kinases_C,GHMP_kinases_N,GalKase_gal_bdg HKD3_k127_7762638_0 234267.Acid_1375 1.647e-197 647.0 COG0738@1|root,COG0738@2|Bacteria,3Y324@57723|Acidobacteria 57723|Acidobacteria G PFAM Major facilitator superfamily - - - ko:K02429 - - - - ko00000,ko02000 2.A.1.7 - - MFS_1 HKD3_k127_7801644_2 448385.sce4565 2.433e-09 64.0 COG2132@1|root,COG2132@2|Bacteria,1MU0J@1224|Proteobacteria,42QJP@68525|delta/epsilon subdivisions,2WMET@28221|Deltaproteobacteria 28221|Deltaproteobacteria Q Multicopper oxidase ompC - 1.16.3.3 ko:K22350 - - - - ko00000,ko01000 - - - Cu-oxidase_2 HKD3_k127_7801644_1 1382359.JIAL01000001_gene562 5.117e-17 91.0 COG1917@1|root,COG1917@2|Bacteria,3Y5JM@57723|Acidobacteria,2JN7Y@204432|Acidobacteriia 204432|Acidobacteriia S Cupin domain - - - - - - - - - - - - Cupin_2 HKD3_k127_7801644_0 926566.Terro_3683 8.625e-50 184.0 COG2152@1|root,COG2152@2|Bacteria,3Y5H3@57723|Acidobacteria,2JM4K@204432|Acidobacteriia 204432|Acidobacteriia G Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 HKD3_k127_7835334_1 243090.RB4127 2.02e-46 179.0 COG3568@1|root,COG3568@2|Bacteria,2IZ9W@203682|Planctomycetes 203682|Planctomycetes S PFAM Endonuclease Exonuclease phosphatase - - - - - - - - - - - - Exo_endo_phos HKD3_k127_7835334_0 290397.Adeh_2227 1.106e-94 312.0 COG2838@1|root,COG2838@2|Bacteria,1MV6Q@1224|Proteobacteria,42MY0@68525|delta/epsilon subdivisions,2WM7X@28221|Deltaproteobacteria,2YUEI@29|Myxococcales 28221|Deltaproteobacteria C Isocitrate dehydrogenase icd - 1.1.1.42 ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 M00009,M00010,M00173,M00740 R00267,R00268,R01899 RC00001,RC00084,RC00114,RC00626,RC02801 br01601,ko00000,ko00001,ko00002,ko01000 - - - IDH HKD3_k127_7880102_3 639282.DEFDS_1074 3.264e-122 398.0 COG0280@1|root,COG0281@1|root,COG0280@2|Bacteria,COG0281@2|Bacteria,2GETU@200930|Deferribacteres 200930|Deferribacteres C Malic enzyme, NAD binding domain - - 1.1.1.40 ko:K00029 ko00620,ko00710,ko01100,ko01120,ko01200,map00620,map00710,map01100,map01120,map01200 M00169,M00172 R00216 RC00105 ko00000,ko00001,ko00002,ko01000 - - - Malic_M,PTA_PTB,malic HKD3_k127_7880102_2 215803.DB30_5331 1.364e-138 456.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2WIT0@28221|Deltaproteobacteria,2YUJU@29|Myxococcales 28221|Deltaproteobacteria T response regulator - - - ko:K07713 ko02020,map02020 M00499 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat HKD3_k127_7880102_5 448385.sce7929 2.103e-54 203.0 COG4191@1|root,COG4191@2|Bacteria,1MY5P@1224|Proteobacteria,42MTA@68525|delta/epsilon subdivisions,2WJ9Q@28221|Deltaproteobacteria,2YUZA@29|Myxococcales 28221|Deltaproteobacteria T Histidine kinase - - - - - - - - - - - - 4HB_MCP_1,CHASE3,HAMP,HATPase_c,HisKA HKD3_k127_7880102_0 1121920.AUAU01000012_gene2677 5.368e-254 794.0 COG0281@1|root,COG0281@2|Bacteria,3Y43V@57723|Acidobacteria 57723|Acidobacteria C Malic enzyme, NAD binding domain - - 1.1.1.38 ko:K00027 ko00620,ko01200,ko02020,map00620,map01200,map02020 - R00214 RC00105 ko00000,ko00001,ko01000 - - - Malic_M,malic HKD3_k127_7880102_6 1408254.T458_08615 1.793e-53 191.0 COG1970@1|root,COG1970@2|Bacteria,1VA14@1239|Firmicutes,4HKIA@91061|Bacilli,26YAQ@186822|Paenibacillaceae 91061|Bacilli M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell mscL GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - ko:K03282 - - - - ko00000,ko02000 1.A.22.1 - - MscL HKD3_k127_7880102_7 1123376.AUIU01000011_gene1137 1.316e-39 156.0 COG0546@1|root,COG0546@2|Bacteria 2|Bacteria S glycolate biosynthetic process gph1 - 3.1.3.18 ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 - R01334 RC00017 ko00000,ko00001,ko01000 - - - HAD,HAD_2,Hydrolase_like HKD3_k127_7880102_13 330084.JNYZ01000011_gene7119 5.231e-13 78.0 COG1131@1|root,COG1131@2|Bacteria,2GJ0Y@201174|Actinobacteria,4E25M@85010|Pseudonocardiales 201174|Actinobacteria V PFAM ABC transporter - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_7880102_9 1128421.JAGA01000003_gene3229 9.636e-27 121.0 COG2890@1|root,COG2890@2|Bacteria 2|Bacteria J protein-(glutamine-N5) methyltransferase activity - - - - - - - - - - - - Methyltransf_25,NodS,PIG-L HKD3_k127_7880102_4 215803.DB30_0285 9.966e-58 214.0 COG0613@1|root,COG0613@2|Bacteria,1QV9S@1224|Proteobacteria,43BP1@68525|delta/epsilon subdivisions,2X70C@28221|Deltaproteobacteria,2YWF9@29|Myxococcales 28221|Deltaproteobacteria S DNA polymerase alpha chain like domain - - 3.1.3.97 ko:K07053 - - R00188,R11188 RC00078 ko00000,ko01000 - - - PHP HKD3_k127_7880102_10 1121441.AUCX01000009_gene2470 2.106e-26 121.0 COG0735@1|root,COG0735@2|Bacteria,1RDWJ@1224|Proteobacteria,42MN8@68525|delta/epsilon subdivisions,2X5PR@28221|Deltaproteobacteria,2MBC8@213115|Desulfovibrionales 28221|Deltaproteobacteria K Belongs to the Fur family fur - - ko:K03711 - - - - ko00000,ko03000 - - - FUR HKD3_k127_7880102_8 1162668.LFE_0723 6.67e-34 133.0 COG0316@1|root,COG0316@2|Bacteria,3J0TZ@40117|Nitrospirae 40117|Nitrospirae S Belongs to the HesB IscA family - - - ko:K15724 - - - - ko00000 - - - Fe-S_biosyn HKD3_k127_7880102_1 1382356.JQMP01000004_gene337 7.435e-168 546.0 COG1012@1|root,COG1012@2|Bacteria,2G5NY@200795|Chloroflexi,27XK3@189775|Thermomicrobia 189775|Thermomicrobia C Aldehyde dehydrogenase family - - - - - - - - - - - - Aldedh HKD3_k127_7880102_12 926566.Terro_1299 2.668e-13 79.0 COG4914@1|root,COG4914@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - DUF2204 HKD3_k127_7880102_11 1340493.JNIF01000003_gene2325 2.456e-23 101.0 COG0577@1|root,COG0577@2|Bacteria 2|Bacteria V efflux transmembrane transporter activity macB_1 - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD HKD3_k127_7937291_0 1267535.KB906767_gene448 4.013e-164 531.0 COG0595@1|root,COG0595@2|Bacteria,3Y2NH@57723|Acidobacteria,2JI53@204432|Acidobacteriia 204432|Acidobacteriia S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay rnj - - ko:K12574 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - Lactamase_B,RMMBL HKD3_k127_7937291_1 1382359.JIAL01000001_gene136 1.992e-82 291.0 COG1674@1|root,COG1674@2|Bacteria,3Y3CJ@57723|Acidobacteria,2JHRN@204432|Acidobacteriia 204432|Acidobacteriia D Ftsk_gamma - - - ko:K03466 - - - - ko00000,ko03036 3.A.12 - - FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma HKD3_k127_8008237_2 749414.SBI_04631 1.334e-45 190.0 COG0488@1|root,COG2319@1|root,COG0488@2|Bacteria,COG2319@2|Bacteria,2GJN3@201174|Actinobacteria 201174|Actinobacteria F WD-40 repeat - - - - - - - - - - - - ANAPC4_WD40,HTH_3,HTH_31,WD40 HKD3_k127_8008237_3 999547.KI421500_gene1302 3.813e-13 75.0 COG2267@1|root,COG2267@2|Bacteria,1PB1R@1224|Proteobacteria,2TVHB@28211|Alphaproteobacteria 28211|Alphaproteobacteria I Alpha beta hydrolase - - - - - - - - - - - - Abhydrolase_1,Abhydrolase_6,Hydrolase_4 HKD3_k127_8008237_1 1212548.B381_05761 6.023e-51 187.0 COG0590@1|root,COG0590@2|Bacteria,1RGU0@1224|Proteobacteria,1S60Z@1236|Gammaproteobacteria,1Z2UE@136846|Pseudomonas stutzeri group 1236|Gammaproteobacteria FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) tadA GO:0002097,GO:0002100,GO:0003674,GO:0003824,GO:0004000,GO:0005488,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008251,GO:0008270,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0034470,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0046914,GO:0052717,GO:0071704,GO:0090304,GO:1901360 3.5.4.33 ko:K11991 - - R10223 RC00477 ko00000,ko01000,ko03016 - - - MafB19-deam,dCMP_cyt_deam_1 HKD3_k127_8008237_4 1123376.AUIU01000014_gene709 4.866e-13 77.0 COG0484@1|root,COG0484@2|Bacteria 2|Bacteria O heat shock protein binding - - - - - - - - - - - - Cytochrom_CIII,Cytochrom_c3_2,Cytochrome_C7,PKD HKD3_k127_8008237_0 292415.Tbd_1072 0.0 1060.0 COG2132@1|root,COG2132@2|Bacteria,1MU0J@1224|Proteobacteria,2VS7B@28216|Betaproteobacteria 28216|Betaproteobacteria Q Multicopper oxidase - - - - - - - - - - - - Cu-oxidase_2 HKD3_k127_8086675_5 1499967.BAYZ01000159_gene506 2.858e-15 78.0 28JE3@1|root,2Z98B@2|Bacteria,2NQ8M@2323|unclassified Bacteria 2|Bacteria - - - - - - - - - - - - - - AbiEii HKD3_k127_8086675_1 234267.Acid_3250 6.908e-112 374.0 COG0626@1|root,COG0626@2|Bacteria 2|Bacteria E cystathionine gamma-synthase activity megL - 2.5.1.48,2.5.1.49,4.4.1.11,4.4.1.8 ko:K01739,ko:K01740,ko:K01760,ko:K01761,ko:K10764 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 M00017 R00654,R00782,R00999,R01286,R01287,R01288,R02408,R02508,R03217,R03260,R04770,R04859,R04941,R04944,R04945,R04946 RC00020,RC00056,RC00069,RC00196,RC00348,RC00382,RC00420,RC00488,RC00710,RC01209,RC01210,RC01245,RC02303,RC02821,RC02848,RC02866 ko00000,ko00001,ko00002,ko01000 - - - Cys_Met_Meta_PP HKD3_k127_8086675_0 1267535.KB906767_gene2998 0.0 1178.0 COG0553@1|root,COG0553@2|Bacteria,3Y61F@57723|Acidobacteria 57723|Acidobacteria L SNF2 Helicase protein - - - - - - - - - - - - DUF3670,Helicase_C,SNF2_N HKD3_k127_8086675_2 1267535.KB906767_gene2997 7.571e-89 320.0 COG4279@1|root,COG4279@2|Bacteria,3Y8KE@57723|Acidobacteria 57723|Acidobacteria S SWIM zinc finger - - - - - - - - - - - - SWIM HKD3_k127_8086675_6 266117.Rxyl_0586 1.797e-10 64.0 COG1476@1|root,COG1598@1|root,COG1476@2|Bacteria,COG1598@2|Bacteria 2|Bacteria N PFAM Uncharacterised protein family UPF0150 - - - ko:K03088,ko:K07110 - - - - ko00000,ko03000,ko03021 - - - HTH_3,HTH_31,Peptidase_M78 HKD3_k127_8086675_4 765420.OSCT_1752 3.247e-16 80.0 COG1724@1|root,COG1724@2|Bacteria,2G9TH@200795|Chloroflexi 200795|Chloroflexi N HicA toxin of bacterial toxin-antitoxin, - - - - - - - - - - - - HicA_toxin HKD3_k127_8086675_7 545264.KB898746_gene840 8.511e-06 56.0 COG2445@1|root,COG2445@2|Bacteria,1RD67@1224|Proteobacteria,1SAKV@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Protein of unknown function DUF86 - - - - - - - - - - - - DUF86 HKD3_k127_8086675_3 220664.PFL_2851 2.101e-24 109.0 COG3637@1|root,COG3637@2|Bacteria,1R3Z1@1224|Proteobacteria 1224|Proteobacteria M Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - - - - - - - - - - - HKD3_k127_8088302_4 861299.J421_1829 2.703e-109 357.0 COG1506@1|root,COG1506@2|Bacteria,1ZSYK@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Prolyl oligopeptidase family - - - - - - - - - - - - Peptidase_S9 HKD3_k127_8088302_14 589865.DaAHT2_2282 0.0002497 53.0 COG4970@1|root,COG4970@2|Bacteria,1Q0DU@1224|Proteobacteria,42W7A@68525|delta/epsilon subdivisions,2WS6U@28221|Deltaproteobacteria,2MKVN@213118|Desulfobacterales 28221|Deltaproteobacteria NU Type II transport protein GspH - - - ko:K08084 - - - - ko00000,ko02044 3.A.15.2 - - GspH,N_methyl HKD3_k127_8088302_7 1047013.AQSP01000066_gene718 2.44e-38 167.0 COG3419@1|root,COG3419@2|Bacteria 2|Bacteria NU Tfp pilus assembly protein tip-associated adhesin pilY1 - - ko:K02674 - - - - ko00000,ko02035,ko02044 - - - Neisseria_PilC,VWA_2 HKD3_k127_8088302_12 1125863.JAFN01000001_gene2185 2.113e-06 61.0 COG1404@1|root,COG4966@1|root,COG1404@2|Bacteria,COG4966@2|Bacteria 2|Bacteria NU pilus assembly protein PilW - - 3.4.21.62 ko:K01342,ko:K02672,ko:K20276 ko02024,map02024 - - - ko00000,ko00001,ko01000,ko01002,ko02035,ko02044,ko03110 - - - N_methyl,PPC,Peptidase_C2,PilW HKD3_k127_8088302_13 439235.Dalk_3174 2.959e-06 59.0 COG0457@1|root,COG0457@2|Bacteria 439235.Dalk_3174|- S peptidyl-tyrosine sulfation - - - - - - - - - - - - - HKD3_k127_8088302_0 1379270.AUXF01000003_gene3608 0.0 1530.0 COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,1ZSS1@142182|Gemmatimonadetes 142182|Gemmatimonadetes O Tricorn protease homolog - - - ko:K08676 - - - - ko00000,ko01000,ko01002 - - - PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ HKD3_k127_8088302_2 1191523.MROS_0619 8.029e-261 857.0 COG1022@1|root,COG1022@2|Bacteria 2|Bacteria I Amp-dependent synthetase and ligase - - 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding HKD3_k127_8088302_1 761193.Runsl_4224 5.584e-289 922.0 COG1554@1|root,COG1554@2|Bacteria,4NEWW@976|Bacteroidetes,47JFT@768503|Cytophagia 976|Bacteroidetes G Glycosyl hydrolase family 65, N-terminal domain - - 3.2.1.51 ko:K15923 ko00511,map00511 - - - ko00000,ko00001,ko01000 - GH95 - Glyco_hyd_65N_2 HKD3_k127_8088302_8 1219035.NT2_02_00530 5.395e-25 112.0 COG0500@1|root,COG2226@2|Bacteria,1PVPS@1224|Proteobacteria,2TREE@28211|Alphaproteobacteria,2JZZE@204457|Sphingomonadales 204457|Sphingomonadales Q ubiquinone menaquinone biosynthesis - - - - - - - - - - - - Methyltransf_11,Methyltransf_25,Methyltransf_31 HKD3_k127_8088302_10 1184609.KILIM_031_00410 7.244e-19 91.0 COG1848@1|root,COG1848@2|Bacteria,2GRA5@201174|Actinobacteria 201174|Actinobacteria S Toxic component of a toxin-antitoxin (TA) module. An RNase - - - ko:K07064 - - - - ko00000 - - - PIN HKD3_k127_8088302_11 526225.Gobs_0798 6.875e-15 79.0 COG4118@1|root,COG4118@2|Bacteria,2GZW9@201174|Actinobacteria,4EWJT@85013|Frankiales 201174|Actinobacteria D Antitoxin component of a toxin-antitoxin (TA) module - - - - - - - - - - - - PhdYeFM_antitox HKD3_k127_8088302_5 344747.PM8797T_21733 1.619e-102 349.0 COG3356@1|root,COG3356@2|Bacteria,2IX5S@203682|Planctomycetes 2|Bacteria S Neutral/alkaline non-lysosomal ceramidase, N-terminal - - - - - - - - - - - - Ceramidase_alk HKD3_k127_8088302_3 177439.DP0087 1.959e-167 541.0 COG0318@1|root,COG0318@2|Bacteria,1QVGC@1224|Proteobacteria,43BUA@68525|delta/epsilon subdivisions 1224|Proteobacteria IQ AMP-binding enzyme C-terminal domain - - 2.3.1.40,6.2.1.20 ko:K05939 ko00071,ko00564,map00071,map00564 - R01406,R04864 RC00014,RC00039,RC00041 ko00000,ko00001,ko01000 - - - AMP-binding HKD3_k127_8088302_9 1267534.KB906755_gene4541 5.755e-19 102.0 2DBAV@1|root,2Z84I@2|Bacteria,3Y2PF@57723|Acidobacteria,2JIIF@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - HKD3_k127_8088302_6 1121396.KB893111_gene1920 1.066e-47 183.0 COG0796@1|root,COG0796@2|Bacteria 2|Bacteria M Provides the (R)-glutamate required for cell wall biosynthesis - - 5.1.1.3 ko:K01776 ko00471,ko01100,map00471,map01100 - R00260 RC00302 ko00000,ko00001,ko01000,ko01011 - - - Asp_Glu_race HKD3_k127_8111893_3 1303518.CCALI_00807 1.129e-34 147.0 COG0553@1|root,COG0553@2|Bacteria 2|Bacteria L helicase activity hepA - - - - - - - - - - - Helicase_C,ResIII,SNF2_N HKD3_k127_8111893_0 1267535.KB906767_gene1018 6.749e-218 697.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,3Y3IB@57723|Acidobacteria 57723|Acidobacteria EU Prolyl oligopeptidase family - - - - - - - - - - - - PD40,Peptidase_S9 HKD3_k127_8111893_2 1267535.KB906767_gene3093 6.827e-41 172.0 COG1413@1|root,COG1413@2|Bacteria 2|Bacteria C deoxyhypusine monooxygenase activity - - - - - - - - - - - - HEAT_2,HEAT_PBS HKD3_k127_8111893_1 234267.Acid_7247 1.387e-54 197.0 COG1595@1|root,COG1595@2|Bacteria,3Y815@57723|Acidobacteria 57723|Acidobacteria K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 HKD3_k127_8292037_5 671143.DAMO_2206 6.915e-40 159.0 COG0488@1|root,COG0488@2|Bacteria,2NNP9@2323|unclassified Bacteria 2|Bacteria S ABC transporter uup GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010528,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031323,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0070894,GO:0071944,GO:0080090,GO:0097159,GO:1901363 - ko:K15738 - - - - ko00000,ko02000 3.A.1.120.6 - - ABC_tran,ABC_tran_CTD,ABC_tran_Xtn HKD3_k127_8292037_1 452637.Oter_3627 3.786e-167 537.0 COG1055@1|root,COG1055@2|Bacteria,46S61@74201|Verrucomicrobia,3K7MJ@414999|Opitutae 414999|Opitutae P Putative Na+/H+ antiporter - - - - - - - - - - - - Na_H_antiport_3 HKD3_k127_8292037_3 1158165.KB898876_gene1364 5.565e-90 319.0 COG0651@1|root,COG0651@2|Bacteria,1N6BY@1224|Proteobacteria,1RR4C@1236|Gammaproteobacteria,1WWFY@135613|Chromatiales 135613|Chromatiales CP PFAM NADH Ubiquinone plastoquinone (complex I) - - - - - - - - - - - - Proton_antipo_M HKD3_k127_8292037_0 1123368.AUIS01000004_gene137 1.801e-201 645.0 COG0651@1|root,COG0651@2|Bacteria,1QU5Z@1224|Proteobacteria,1T20X@1236|Gammaproteobacteria 1236|Gammaproteobacteria CP PFAM NADH Ubiquinone plastoquinone (complex I) - - - ko:K05568 - - - - ko00000,ko02000 2.A.63.1,2.A.63.2 - - Proton_antipo_M,Proton_antipo_N HKD3_k127_8292037_2 1123368.AUIS01000004_gene136 1.197e-118 399.0 COG0651@1|root,COG0651@2|Bacteria,1MURB@1224|Proteobacteria,1RYB4@1236|Gammaproteobacteria 1236|Gammaproteobacteria CP Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter MnhD subunit - - - - - - - - - - - - Proton_antipo_M,Proton_antipo_N HKD3_k127_8292037_8 1278073.MYSTI_06809 1.419e-18 88.0 COG1006@1|root,COG1006@2|Bacteria,1N7TX@1224|Proteobacteria,43388@68525|delta/epsilon subdivisions,2WXIS@28221|Deltaproteobacteria 28221|Deltaproteobacteria P NADH-ubiquinone/plastoquinone oxidoreductase chain 4L - - - ko:K05567 - - - - ko00000,ko02000 2.A.63.1,2.A.63.2 - - Oxidored_q2 HKD3_k127_8292037_4 1123368.AUIS01000004_gene134 1.628e-53 200.0 COG1563@1|root,COG1563@2|Bacteria,1RB3N@1224|Proteobacteria,1S74H@1236|Gammaproteobacteria 1236|Gammaproteobacteria P Domain related to MnhB subunit of Na+/H+ antiporter - - - - - - - - - - - - DUF4040,MnhB HKD3_k127_8292037_6 649638.Trad_1680 7.01e-25 109.0 COG1320@1|root,COG1320@2|Bacteria 2|Bacteria P monovalent cation:proton antiporter activity - - - ko:K05571 - - - - ko00000,ko02000 2.A.63.1,2.A.63.2 - - PhaG_MnhG_YufB HKD3_k127_8292037_9 1121127.JAFA01000002_gene1562 1.726e-05 51.0 COG2212@1|root,COG2212@2|Bacteria,1N90U@1224|Proteobacteria,2W7B3@28216|Betaproteobacteria,1KE8Y@119060|Burkholderiaceae 28216|Betaproteobacteria P Multiple resistance and pH regulation protein F (MrpF / PhaF) - - - - - - - - - - - - MrpF_PhaF HKD3_k127_8292037_7 1249627.D779_3486 1.04e-20 101.0 COG1863@1|root,COG1863@2|Bacteria,1N7MB@1224|Proteobacteria,1SCQX@1236|Gammaproteobacteria,1WYUR@135613|Chromatiales 135613|Chromatiales P PFAM cation antiporter - - - ko:K05569 - - - - ko00000,ko02000 2.A.63.1,2.A.63.2 - - MNHE HKD3_k127_8292732_15 926566.Terro_4169 3.779e-22 100.0 COG0443@1|root,COG0443@2|Bacteria,3Y2F8@57723|Acidobacteria,2JIVF@204432|Acidobacteriia 204432|Acidobacteriia O heat shock protein 70 - - - ko:K04043,ko:K04044 ko03018,ko04212,ko05152,map03018,map04212,map05152 - - - ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 1.A.33,1.A.33.1 - - HSP70 HKD3_k127_8292732_12 1267535.KB906767_gene1459 1.084e-36 150.0 COG0633@1|root,COG0633@2|Bacteria,3Y4T7@57723|Acidobacteria,2JJFT@204432|Acidobacteriia 204432|Acidobacteriia C 2Fe-2S iron-sulfur cluster binding domain - - - ko:K04755 - - - - ko00000 - - - Fer2 HKD3_k127_8292732_14 240015.ACP_2551 1.516e-23 101.0 COG2975@1|root,COG2975@2|Bacteria,3Y5I4@57723|Acidobacteria,2JJZY@204432|Acidobacteriia 204432|Acidobacteriia S FeS assembly protein IscX - - - - - - - - - - - - Fe-S_assembly HKD3_k127_8292732_5 204536.SULAZ_1484 3.613e-93 313.0 COG2107@1|root,COG2107@2|Bacteria,2G4EE@200783|Aquificae 200783|Aquificae S Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) mqnD - - ko:K11785 ko00130,ko01110,map00130,map01110 - R08589 RC02330 ko00000,ko00001,ko01000 - - - VitK2_biosynth HKD3_k127_8292732_10 1123508.JH636441_gene3281 2.072e-44 180.0 COG1196@1|root,COG1196@2|Bacteria,2J4NQ@203682|Planctomycetes 203682|Planctomycetes D Methyltransferase FkbM domain - - - - - - - - - - - - Methyltransf_21 HKD3_k127_8292732_13 278963.ATWD01000001_gene1753 2.108e-34 152.0 COG0614@1|root,COG0614@2|Bacteria,3Y7Z8@57723|Acidobacteria 57723|Acidobacteria P Periplasmic binding protein - - - - - - - - - - - - Peripla_BP_2 HKD3_k127_8292732_7 105559.Nwat_2269 1.429e-80 281.0 COG0609@1|root,COG0609@2|Bacteria,1MV9W@1224|Proteobacteria,1RMDF@1236|Gammaproteobacteria,1WWFW@135613|Chromatiales 135613|Chromatiales P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily - - - ko:K02015 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14 - - FecCD HKD3_k127_8292732_8 1041930.Mtc_1719 1.707e-61 225.0 COG1120@1|root,arCOG00199@2157|Archaea,2XTTV@28890|Euryarchaeota,2NA71@224756|Methanomicrobia 224756|Methanomicrobia E ATPases associated with a variety of cellular activities - - 3.6.3.34 ko:K02013 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.14 - - ABC_tran HKD3_k127_8292732_3 234267.Acid_0122 9.931e-99 353.0 COG4206@1|root,COG4206@2|Bacteria,3Y42S@57723|Acidobacteria 57723|Acidobacteria H TonB-dependent Receptor Plug Domain - - - ko:K02014,ko:K16092 - - - - ko00000,ko02000 1.B.14,1.B.14.3 - - CarboxypepD_reg,Plug,TonB_dep_Rec HKD3_k127_8292732_0 290397.Adeh_0372 1.617e-133 439.0 COG1060@1|root,COG1060@2|Bacteria,1QN23@1224|Proteobacteria,42M6Z@68525|delta/epsilon subdivisions,2WJ4C@28221|Deltaproteobacteria,2YYN9@29|Myxococcales 28221|Deltaproteobacteria H Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate mqnE - 1.21.98.1,2.5.1.120,2.5.1.77 ko:K11779,ko:K11784,ko:K18285 ko00130,ko00680,ko01110,ko01120,map00130,map00680,map01110,map01120 M00378 R08588,R09396,R10667 RC00021,RC01381,RC02329,RC03002,RC03007,RC03234 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_3391 Radical_SAM HKD3_k127_8292732_6 1340493.JNIF01000003_gene2784 4.03e-82 291.0 COG0673@1|root,COG0673@2|Bacteria,3Y3V4@57723|Acidobacteria 2|Bacteria S PFAM oxidoreductase domain protein - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C HKD3_k127_8292732_2 324925.Ppha_0843 4.805e-112 377.0 COG0451@1|root,COG0451@2|Bacteria 2|Bacteria GM ADP-glyceromanno-heptose 6-epimerase activity - - 1.1.1.219 ko:K00091 - - - - ko00000,ko01000 - - - Epimerase HKD3_k127_8292732_4 1382304.JNIL01000001_gene3207 2.599e-96 319.0 COG0605@1|root,COG0605@2|Bacteria,1TPXT@1239|Firmicutes,4HA6U@91061|Bacilli,2781X@186823|Alicyclobacillaceae 91061|Bacilli P Destroys radicals which are normally produced within the cells and which are toxic to biological systems sodA - 1.15.1.1 ko:K04564 ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016 - - - ko00000,ko00001,ko01000 - - - Sod_Fe_C,Sod_Fe_N HKD3_k127_8292732_16 304371.MCP_1850 6.025e-08 58.0 COG1225@1|root,arCOG00310@2157|Archaea 2157|Archaea O alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - 1.11.1.15 ko:K03564 - - - - ko00000,ko01000 - - - AhpC-TSA HKD3_k127_8292732_17 441769.ABFU01000066_gene1881 1.242e-05 49.0 COG1225@1|root,COG1225@2|Bacteria,1V24A@1239|Firmicutes,4HFUX@91061|Bacilli,1ZEQT@1386|Bacillus 91061|Bacilli O Redoxin - - - - - - - - - - - - AhpC-TSA HKD3_k127_8292732_11 234267.Acid_2934 9.367e-38 150.0 COG3945@1|root,COG3945@2|Bacteria,3Y5T8@57723|Acidobacteria 57723|Acidobacteria S Hemerythrin HHE cation binding domain - - - - - - - - - - - - Hemerythrin HKD3_k127_8292732_9 1232410.KI421426_gene1437 2.39e-46 179.0 arCOG11509@1|root,31KIR@2|Bacteria,1RGVE@1224|Proteobacteria,42T74@68525|delta/epsilon subdivisions,2WPQ8@28221|Deltaproteobacteria,43UQJ@69541|Desulfuromonadales 28221|Deltaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_8292732_1 671143.DAMO_1611 3.664e-114 378.0 COG0303@1|root,COG0303@2|Bacteria,2NP4N@2323|unclassified Bacteria 2|Bacteria H MoeA N-terminal region (domain I and II) moeA - 2.10.1.1 ko:K03750,ko:K07219 ko00790,ko01100,map00790,map01100 - R09735 RC03462 ko00000,ko00001,ko01000 - - - MoCF_biosynth,MoeA_C,MoeA_N,PBP_like HKD3_k127_8301077_1 1123368.AUIS01000004_gene137 2.561e-128 417.0 COG0651@1|root,COG0651@2|Bacteria,1QU5Z@1224|Proteobacteria,1T20X@1236|Gammaproteobacteria 1236|Gammaproteobacteria CP PFAM NADH Ubiquinone plastoquinone (complex I) - - - ko:K05568 - - - - ko00000,ko02000 2.A.63.1,2.A.63.2 - - Proton_antipo_M,Proton_antipo_N HKD3_k127_8301077_3 713586.KB900536_gene2691 5.437e-91 321.0 COG0651@1|root,COG0651@2|Bacteria,1N6BY@1224|Proteobacteria,1RR4C@1236|Gammaproteobacteria,1WWFY@135613|Chromatiales 135613|Chromatiales CP PFAM NADH Ubiquinone plastoquinone (complex I) - - - - - - - - - - - - Proton_antipo_M HKD3_k127_8301077_0 452637.Oter_3627 1.899e-163 527.0 COG1055@1|root,COG1055@2|Bacteria,46S61@74201|Verrucomicrobia,3K7MJ@414999|Opitutae 414999|Opitutae P Putative Na+/H+ antiporter - - - - - - - - - - - - Na_H_antiport_3 HKD3_k127_8301077_2 671143.DAMO_2206 1.276e-98 325.0 COG0488@1|root,COG0488@2|Bacteria,2NNP9@2323|unclassified Bacteria 2|Bacteria S ABC transporter uup GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010528,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031323,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0070894,GO:0071944,GO:0080090,GO:0097159,GO:1901363 - ko:K15738 - - - - ko00000,ko02000 3.A.1.120.6 - - ABC_tran,ABC_tran_CTD,ABC_tran_Xtn HKD3_k127_8460249_4 575540.Isop_2477 4.081e-104 346.0 COG0673@1|root,COG0673@2|Bacteria,2IXFW@203682|Planctomycetes 203682|Planctomycetes S dehydrogenases and related proteins - - - - - - - - - - - - GFO_IDH_MocA HKD3_k127_8460249_5 575540.Isop_1244 1.984e-100 337.0 COG3622@1|root,COG3622@2|Bacteria,2IYNY@203682|Planctomycetes 203682|Planctomycetes G Xylose isomerase-like TIM barrel - - 5.3.1.22 ko:K01816 ko00630,ko01100,map00630,map01100 - R01394 RC00511 ko00000,ko00001,ko01000 - - - AP_endonuc_2 HKD3_k127_8460249_0 1267535.KB906767_gene4851 9.272e-184 587.0 COG3669@1|root,COG3669@2|Bacteria 2|Bacteria G Alpha-L-fucosidase - - - - - - - - - - - - Alpha_L_fucos HKD3_k127_8460249_3 243231.GSU1538 1.067e-138 452.0 COG1858@1|root,COG1858@2|Bacteria,1MV70@1224|Proteobacteria,42N38@68525|delta/epsilon subdivisions,2WK56@28221|Deltaproteobacteria 28221|Deltaproteobacteria C cytochrome c peroxidase - - - - - - - - - - - - CCP_MauG,Cytochrom_C HKD3_k127_8460249_9 1370120.AUWR01000054_gene2920 6.092e-13 69.0 COG1487@1|root,COG1487@2|Bacteria,2INNM@201174|Actinobacteria,23BPH@1762|Mycobacteriaceae 201174|Actinobacteria S ribonuclease activity - - - - - - - - - - - - PIN HKD3_k127_8460249_6 525897.Dbac_2439 3.503e-42 159.0 COG4852@1|root,COG4852@2|Bacteria,1MZHP@1224|Proteobacteria,42TD7@68525|delta/epsilon subdivisions,2WPIH@28221|Deltaproteobacteria,2MF5C@213115|Desulfovibrionales 28221|Deltaproteobacteria S Predicted membrane protein (DUF2177) - - - - - - - - - - - - DUF2177 HKD3_k127_8460249_10 652103.Rpdx1_1479 4.029e-09 64.0 2E6S2@1|root,331C5@2|Bacteria,1RH06@1224|Proteobacteria,2U98E@28211|Alphaproteobacteria,3K6MG@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_8460249_1 945713.IALB_1428 8.726e-179 574.0 COG0436@1|root,COG0436@2|Bacteria 2|Bacteria E Aminotransferase alaC - - - - - - - - - - - Aminotran_1_2 HKD3_k127_8460249_8 1340493.JNIF01000003_gene3766 5.971e-35 154.0 296JB@1|root,2ZTUW@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_8460249_2 344747.PM8797T_20468 4.242e-149 480.0 COG1649@1|root,COG1649@2|Bacteria,2J26N@203682|Planctomycetes 203682|Planctomycetes S PFAM Uncharacterised BCR, COG1649 - - - - - - - - - - - - - HKD3_k127_8460249_7 1267535.KB906767_gene4539 6.952e-38 153.0 COG2823@1|root,COG2823@2|Bacteria,3Y7ZV@57723|Acidobacteria 57723|Acidobacteria S Periplasmic or secreted lipoprotein - - - - - - - - - - - - - HKD3_k127_8460489_0 1340493.JNIF01000003_gene1504 5.055e-116 380.0 COG1131@1|root,COG1131@2|Bacteria,3Y4YH@57723|Acidobacteria 57723|Acidobacteria V ABC transporter - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_8460489_5 1121272.KB903249_gene1593 8.03e-32 142.0 COG2133@1|root,COG3537@1|root,COG2133@2|Bacteria,COG3537@2|Bacteria,2GRVP@201174|Actinobacteria,4DBCG@85008|Micromonosporales 201174|Actinobacteria G PA14 - - - - - - - - - - - - CBM_35,DUF1080,F5_F8_type_C,PA14,Ricin_B_lectin HKD3_k127_8460489_3 1340493.JNIF01000003_gene1505 1.007e-59 228.0 2F2X8@1|root,33VSU@2|Bacteria,3Y7XB@57723|Acidobacteria 57723|Acidobacteria - - - - - - - - - - - - - - - HKD3_k127_8460489_2 744872.Spica_2005 8.671e-63 222.0 COG0745@1|root,COG0745@2|Bacteria,2J86T@203691|Spirochaetes 203691|Spirochaetes K COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - ko:K07658 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C HKD3_k127_8460489_1 234267.Acid_1102 3.161e-64 241.0 COG0642@1|root,COG2205@2|Bacteria,3Y4AU@57723|Acidobacteria 57723|Acidobacteria T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HisKA HKD3_k127_8460489_6 357808.RoseRS_3483 8.6e-29 122.0 2DN0I@1|root,32UR2@2|Bacteria,2G8Y2@200795|Chloroflexi,375Q5@32061|Chloroflexia 32061|Chloroflexia S Domain of unknown function (DUF4405) - - - - - - - - - - - - DUF4405 HKD3_k127_8460489_4 313603.FB2170_11916 4.727e-45 178.0 COG2091@1|root,COG2091@2|Bacteria,4NFQ6@976|Bacteroidetes,1HZHJ@117743|Flavobacteriia,2PIWB@252356|Maribacter 976|Bacteroidetes H lysine biosynthetic process via aminoadipic acid - - - - - - - - - - - - CBM9_1 HKD3_k127_8460558_3 1168065.DOK_06190 1.101e-05 53.0 COG3178@1|root,COG3178@2|Bacteria,1MXCH@1224|Proteobacteria,1RQ1Q@1236|Gammaproteobacteria,1J50Q@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria S related to Ser Thr protein kinases - GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006022,GO:0006040,GO:0006082,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.1.221 ko:K07102 ko00520,ko01100,map00520,map01100 - R08968,R11024 RC00002,RC00078 ko00000,ko00001,ko01000 - - - APH HKD3_k127_8460558_1 404589.Anae109_3818 1.199e-35 150.0 COG1208@1|root,COG1208@2|Bacteria,1MUYJ@1224|Proteobacteria,42MX5@68525|delta/epsilon subdivisions,2WKAF@28221|Deltaproteobacteria,2Z2Y6@29|Myxococcales 28221|Deltaproteobacteria M Nucleotidyl transferase - - 2.7.7.13,5.4.2.8 ko:K00966,ko:K16881 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 M00114,M00361,M00362 R00885,R01818 RC00002,RC00408 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_3178 Hexapep,NTP_transferase,PGM_PMM_I,PGM_PMM_II,PGM_PMM_III HKD3_k127_8460558_2 596152.DesU5LDRAFT_1737 4.705e-24 109.0 COG1437@1|root,COG1437@2|Bacteria,1N326@1224|Proteobacteria,42U83@68525|delta/epsilon subdivisions,2WQQR@28221|Deltaproteobacteria,2MBY3@213115|Desulfovibrionales 28221|Deltaproteobacteria F PFAM Adenylate cyclase - - 4.6.1.1 ko:K05873 ko00230,map00230 - R00089,R00434 RC00295 ko00000,ko00001,ko01000 - - - CYTH HKD3_k127_8460558_0 443143.GM18_2661 1.803e-72 258.0 COG1565@1|root,COG1565@2|Bacteria,1N3CJ@1224|Proteobacteria,42VQA@68525|delta/epsilon subdivisions,2WUV1@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Putative S-adenosyl-L-methionine-dependent methyltransferase - - - - - - - - - - - - Methyltransf_28 HKD3_k127_8474551_8 1128421.JAGA01000002_gene1840 2.182e-23 102.0 COG2270@1|root,COG2270@2|Bacteria,2NP3G@2323|unclassified Bacteria 2|Bacteria S Vacuole effluxer Atg22 like yxiO - - ko:K06902 ko04138,map04138 - - - ko00000,ko00001,ko02000,ko04131 2.A.1.24,9.A.15.1 - - ATG22,MFS_1 HKD3_k127_8474551_7 1123253.AUBD01000004_gene1116 1.053e-29 126.0 COG1186@1|root,COG1186@2|Bacteria,1RH75@1224|Proteobacteria,1S5YQ@1236|Gammaproteobacteria,1X6MZ@135614|Xanthomonadales 135614|Xanthomonadales J Protein chain release factor B - - - ko:K15034 - - - - ko00000,ko03012 - - - RF-1 HKD3_k127_8474551_3 356851.JOAN01000029_gene4992 3.383e-77 273.0 COG1409@1|root,COG1409@2|Bacteria,2GIT1@201174|Actinobacteria,4DM0J@85008|Micromonosporales 201174|Actinobacteria S Calcineurin-like phosphoesterase - - - - - - - - - - - - Metallophos HKD3_k127_8474551_2 1464048.JNZS01000020_gene2256 1.042e-83 289.0 COG1409@1|root,COG1409@2|Bacteria,2IM97@201174|Actinobacteria,4D9VR@85008|Micromonosporales 201174|Actinobacteria S Calcineurin-like phosphoesterase - - 3.1.3.1 ko:K01077 ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020 M00126 R02135,R04620 RC00017 ko00000,ko00001,ko00002,ko00537,ko01000,ko04147 - - - Metallophos HKD3_k127_8474551_6 1499967.BAYZ01000090_gene4944 5.832e-55 204.0 COG1215@1|root,COG1215@2|Bacteria,2NRME@2323|unclassified Bacteria 2|Bacteria M Glycosyltransferase like family 2 - - - - - - - - - - - - Glycos_transf_2 HKD3_k127_8474551_4 649747.HMPREF0083_01933 1.778e-57 215.0 COG2208@1|root,COG3829@1|root,COG2208@2|Bacteria,COG3829@2|Bacteria,1TS3B@1239|Firmicutes,4HCRR@91061|Bacilli,26RAI@186822|Paenibacillaceae 91061|Bacilli T response regulator rsbU - 3.1.3.3 ko:K07315 - - - - ko00000,ko01000,ko03021 - - - PAS_3,PAS_9,Response_reg,SpoIIE HKD3_k127_8474551_5 402777.KB235904_gene2694 2.365e-57 224.0 COG1807@1|root,COG1807@2|Bacteria,1GI8H@1117|Cyanobacteria,1HETH@1150|Oscillatoriales 1117|Cyanobacteria M Dolichyl-phosphate-mannose-protein mannosyltransferase - - - - - - - - - - - - PMT_2 HKD3_k127_8474551_0 379066.GAU_3714 4.011e-226 717.0 COG2866@1|root,COG2866@2|Bacteria,1ZT9V@142182|Gemmatimonadetes 2|Bacteria E Zn_pept - - - - - - - - - - - - Peptidase_M14 HKD3_k127_8474551_1 880073.Calab_1424 2.702e-108 362.0 COG5002@1|root,COG5002@2|Bacteria 2|Bacteria T protein histidine kinase activity - - 2.7.13.3 ko:K02484,ko:K07636 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HATPase_c,HisKA,PAS_9 HKD3_k127_8477677_0 234267.Acid_4580 5.485e-120 406.0 COG1680@1|root,COG1680@2|Bacteria 2|Bacteria V peptidase activity dap - 3.4.11.19 ko:K01266 - - - - ko00000,ko01000,ko01002 - - - Beta-lactamase,DAP_B HKD3_k127_8477677_1 1499967.BAYZ01000159_gene535 6.336e-19 86.0 COG1917@1|root,COG1917@2|Bacteria,2NQ91@2323|unclassified Bacteria 2|Bacteria S AraC-like ligand binding domain - - - - - - - - - - - - Cupin_2 HKD3_k127_8477754_5 243231.GSU2916 2.365e-45 181.0 COG4191@1|root,COG4191@2|Bacteria,1R5Q1@1224|Proteobacteria,42TFH@68525|delta/epsilon subdivisions,2WPEH@28221|Deltaproteobacteria 28221|Deltaproteobacteria T Histidine kinase HAMP - - - - - - - - - - - - HAMP,HATPase_c,HisKA HKD3_k127_8477754_1 234267.Acid_5396 1.776e-237 782.0 COG1629@1|root,COG1629@2|Bacteria 2|Bacteria P transport - - - - - - - - - - - - CarboxypepD_reg,Plug,TonB_dep_Rec HKD3_k127_8477754_2 983328.AFGH01000038_gene1709 2.543e-88 309.0 COG1495@1|root,COG1495@2|Bacteria,1R9CU@1224|Proteobacteria,42Q8M@68525|delta/epsilon subdivisions,2YN52@29547|Epsilonproteobacteria 29547|Epsilonproteobacteria C Disulfide bond formation protein DsbB dsbI - - ko:K03611 - - - - ko00000,ko03110 5.A.2.1 - - DsbB HKD3_k127_8477754_6 1267534.KB906757_gene1077 3.699e-42 159.0 COG5646@1|root,COG5646@2|Bacteria,3Y6CJ@57723|Acidobacteria,2JM3Q@204432|Acidobacteriia 204432|Acidobacteriia S Domain of unknown function (DU1801) - - - - - - - - - - - - DUF1801 HKD3_k127_8477754_4 706587.Desti_1456 7.915e-64 222.0 COG1225@1|root,COG1225@2|Bacteria,1RD4R@1224|Proteobacteria,42RHG@68525|delta/epsilon subdivisions,2WQ59@28221|Deltaproteobacteria 28221|Deltaproteobacteria O PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen prx-4 - 1.11.1.15 ko:K03564 - - - - ko00000,ko01000 - - - AhpC-TSA HKD3_k127_8477754_3 452637.Oter_1075 2.95e-71 248.0 arCOG09454@1|root,30G4A@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_8477754_7 682795.AciX8_1038 6.935e-22 109.0 COG2304@1|root,COG2304@2|Bacteria,3Y7I6@57723|Acidobacteria,2JMVP@204432|Acidobacteriia 204432|Acidobacteriia S von Willebrand factor type A domain - - - - - - - - - - - - VWA HKD3_k127_8477754_8 1121920.AUAU01000011_gene232 7.323e-15 76.0 COG2104@1|root,COG2104@2|Bacteria 2|Bacteria H thiamine diphosphate biosynthetic process thiS - 2.8.1.10 ko:K03149,ko:K03154 ko00730,ko01100,ko04122,map00730,map01100,map04122 - R10247 RC03096,RC03097,RC03461 ko00000,ko00001,ko01000 - - - ThiS HKD3_k127_8477754_0 1121920.AUAU01000011_gene231 0.0 1039.0 COG2414@1|root,COG2414@2|Bacteria 2|Bacteria C aldehyde ferredoxin oxidoreductase activity - - 1.2.7.5 ko:K03738 ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200 M00309 R08571 RC00242 ko00000,ko00001,ko00002,ko01000 - - - AFOR_C,AFOR_N HKD3_k127_8487224_1 1227488.C477_20865 8.665e-44 179.0 COG0642@1|root,arCOG02330@1|root,arCOG02330@2157|Archaea,arCOG02358@2157|Archaea,2Y7KE@28890|Euryarchaeota 28890|Euryarchaeota T Histidine kinase - - - - - - - - - - - - GAF_2,HATPase_c,HisKA,PAS_3,PAS_4 HKD3_k127_8487224_0 204669.Acid345_0972 3.767e-64 228.0 COG2197@1|root,COG2197@2|Bacteria,3Y2WY@57723|Acidobacteria,2JIR0@204432|Acidobacteriia 204432|Acidobacteriia K helix_turn_helix, Lux Regulon - - - - - - - - - - - - GerE,Response_reg HKD3_k127_8491434_3 869213.JCM21142_83145 7.808e-09 61.0 COG4775@1|root,COG4775@2|Bacteria,4NF9N@976|Bacteroidetes,47JAP@768503|Cytophagia 976|Bacteroidetes M Calcineurin-like phosphoesterase - - - - - - - - - - - - Bac_surface_Ag,Metallophos,ShlB HKD3_k127_8491434_0 247634.GPB2148_1892 2.654e-120 401.0 COG3202@1|root,COG3202@2|Bacteria,1QXXQ@1224|Proteobacteria,1S2KU@1236|Gammaproteobacteria 1236|Gammaproteobacteria C TLC ATP/ADP transporter - - - - - - - - - - - - TLC HKD3_k127_8491434_2 43989.cce_3138 5.261e-20 98.0 2AKEX@1|root,31B6C@2|Bacteria,1GM13@1117|Cyanobacteria,3KIX2@43988|Cyanothece 1117|Cyanobacteria S Protein of unknown function (DUF3011) - - - - - - - - - - - - DUF3011 HKD3_k127_8491434_1 1121405.dsmv_1479 8.998e-31 129.0 COG0834@1|root,COG0834@2|Bacteria,1MWDK@1224|Proteobacteria,42NVT@68525|delta/epsilon subdivisions,2WJ9C@28221|Deltaproteobacteria,2MI3N@213118|Desulfobacterales 28221|Deltaproteobacteria ET Ligated ion channel L-glutamate- and glycine-binding site - - - ko:K02030 - M00236 - - ko00000,ko00002,ko02000 3.A.1.3 - - SBP_bac_3 HKD3_k127_8500376_1 1144275.COCOR_01071 4.311e-25 111.0 COG4770@1|root,COG4770@2|Bacteria,1RJYU@1224|Proteobacteria,42WT6@68525|delta/epsilon subdivisions,2WSN5@28221|Deltaproteobacteria,2YVN7@29|Myxococcales 28221|Deltaproteobacteria I Biotin-requiring enzyme - - - - - - - - - - - - Biotin_lipoyl HKD3_k127_8500376_0 1267534.KB906758_gene2360 1.533e-131 432.0 COG0439@1|root,COG0439@2|Bacteria,3Y3FH@57723|Acidobacteria,2JKRD@204432|Acidobacteriia 204432|Acidobacteriia I Biotin carboxylase C-terminal domain - - 6.3.4.14,6.4.1.2 ko:K01961 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04385 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 - - - Biotin_carb_C,Biotin_carb_N,CPSase_L_D2 HKD3_k127_8501416_7 582744.Msip34_0359 4.425e-15 74.0 2E4YG@1|root,32ZSB@2|Bacteria,1N74T@1224|Proteobacteria,2VVYY@28216|Betaproteobacteria,2KN8H@206350|Nitrosomonadales 206350|Nitrosomonadales S Protein of unknown function (DUF3309) - - - - - - - - - - - - DUF3309 HKD3_k127_8501416_8 1162668.LFE_1067 4.843e-11 70.0 COG1734@1|root,COG1734@2|Bacteria,3J0R1@40117|Nitrospirae 40117|Nitrospirae T Prokaryotic dksA/traR C4-type zinc finger - - - ko:K06204 ko02026,map02026 - - - ko00000,ko00001,ko03000,ko03009,ko03021 - - - zf-dskA_traR HKD3_k127_8501416_11 1266925.JHVX01000001_gene2468 2.521e-10 63.0 2EFZF@1|root,339RM@2|Bacteria,1NH6S@1224|Proteobacteria,2W8JG@28216|Betaproteobacteria,373T2@32003|Nitrosomonadales 28216|Betaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_8501416_4 234267.Acid_6188 1.405e-77 266.0 COG0664@1|root,COG0664@2|Bacteria,3Y69P@57723|Acidobacteria 57723|Acidobacteria K Cyclic nucleotide-monophosphate binding domain - - - - - - - - - - - - HTH_Crp_2,cNMP_binding HKD3_k127_8501416_1 204669.Acid345_2910 3.104e-140 459.0 COG2271@1|root,COG2271@2|Bacteria,3Y2VG@57723|Acidobacteria,2JIWZ@204432|Acidobacteriia 204432|Acidobacteriia G Major Facilitator Superfamily - - - ko:K08191 - - - - ko00000,ko02000 2.A.1.14.2 - - MFS_1 HKD3_k127_8501416_3 204669.Acid345_2909 5.54e-88 297.0 COG0363@1|root,COG0363@2|Bacteria,3Y51I@57723|Acidobacteria,2JK9X@204432|Acidobacteriia 204432|Acidobacteriia G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase - - 3.5.99.6 ko:K02564 ko00520,ko01100,map00520,map01100 - R00765 RC00163 ko00000,ko00001,ko01000 - - - Glucosamine_iso HKD3_k127_8501416_9 237368.SCABRO_03088 7.463e-11 73.0 COG0392@1|root,COG0392@2|Bacteria 2|Bacteria M lysyltransferase activity - - - ko:K07027 - - - - ko00000,ko02000 4.D.2 - - LPG_synthase_TM HKD3_k127_8501416_2 266117.Rxyl_3138 2.1e-124 407.0 COG1533@1|root,COG1533@2|Bacteria,2GM31@201174|Actinobacteria,4CQAG@84995|Rubrobacteria 84995|Rubrobacteria L Radical SAM - - - - - - - - - - - - Radical_SAM HKD3_k127_8501416_0 573065.Astex_3679 1.624e-169 557.0 COG0477@1|root,COG2814@2|Bacteria,1MVKJ@1224|Proteobacteria,2U3NF@28211|Alphaproteobacteria,2KFSU@204458|Caulobacterales 204458|Caulobacterales U Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family - - - - - - - - - - - - Sugar_tr HKD3_k127_8501416_5 545695.TREAZ_2569 2.164e-60 225.0 COG0407@1|root,COG0407@2|Bacteria,2JA7B@203691|Spirochaetes 203691|Spirochaetes H Uroporphyrinogen decarboxylase (URO-D) - - 4.1.1.37 ko:K01599 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R03197,R04972 RC00872 ko00000,ko00001,ko00002,ko01000 - - - URO-D HKD3_k127_8501416_6 1205680.CAKO01000029_gene5240 1.072e-40 161.0 COG5507@1|root,COG5507@2|Bacteria,1RHC1@1224|Proteobacteria,2UC7A@28211|Alphaproteobacteria 28211|Alphaproteobacteria S RNA signal recognition particle 4.5S RNA - - - - - - - - - - - - DUF1428 HKD3_k127_8501416_10 234267.Acid_4684 1.938e-10 66.0 COG1225@1|root,COG1225@2|Bacteria 2|Bacteria O peroxiredoxin activity - - - ko:K02199 - - - - ko00000,ko03110 - - - AhpC-TSA,Redoxin HKD3_k127_8510021_9 1121346.KB899823_gene2357 6.908e-55 202.0 COG1131@1|root,COG1131@2|Bacteria,1TPZR@1239|Firmicutes,4HB36@91061|Bacilli,26QC0@186822|Paenibacillaceae 91061|Bacilli V ABC transporter, ATP-binding protein CcmA - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_8510021_15 445975.COLSTE_02307 7.471e-24 105.0 COG1725@1|root,COG1725@2|Bacteria,2IT01@201174|Actinobacteria,4CW4J@84998|Coriobacteriia 84998|Coriobacteriia K helix_turn_helix gluconate operon transcriptional repressor - - - ko:K07979 - - - - ko00000,ko03000 - - - GntR HKD3_k127_8510021_13 452637.Oter_1881 4.835e-29 124.0 COG1680@1|root,COG4319@1|root,COG1680@2|Bacteria,COG4319@2|Bacteria,46V0A@74201|Verrucomicrobia,3K85Q@414999|Opitutae 414999|Opitutae V beta-lactamase - - - - - - - - - - - - Beta-lactamase HKD3_k127_8510021_16 67593.Physo143078 8.094e-23 114.0 COG0666@1|root,KOG4177@2759|Eukaryota,3QDFE@4776|Peronosporales 4776|Peronosporales M Ankyrin repeats (many copies) - - - - - - - - - - - - Ank_2,Ank_3 HKD3_k127_8510021_12 452637.Oter_1824 8.988e-35 153.0 COG0823@1|root,COG0823@2|Bacteria 2|Bacteria U Involved in the tonB-independent uptake of proteins - - - - - - - - - - - - OmpA,PD40 HKD3_k127_8510021_10 1185876.BN8_01449 1.399e-47 192.0 COG3403@1|root,COG3403@2|Bacteria,4PNZ7@976|Bacteroidetes,47YRG@768503|Cytophagia 976|Bacteroidetes S YqcI/YcgG family - - - - - - - - - - - - - HKD3_k127_8510021_20 1005962.W1Q7I8 1.367e-07 64.0 COG0666@1|root,KOG0504@2759|Eukaryota,3A6XG@33154|Opisthokonta,3P5JB@4751|Fungi,3QUGY@4890|Ascomycota,3RUW7@4891|Saccharomycetes 4751|Fungi S Saccharomyces cerevisiae YCR051W - GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464 - ko:K06867 - - - - ko00000 - - - Ank_2,Ank_4,Ank_5 HKD3_k127_8510021_17 1278073.MYSTI_07470 3.701e-21 109.0 COG0491@1|root,COG0491@2|Bacteria,1Q2NG@1224|Proteobacteria,4389J@68525|delta/epsilon subdivisions,2X3IZ@28221|Deltaproteobacteria,2YWA6@29|Myxococcales 28221|Deltaproteobacteria S Metallo-beta-lactamase superfamily - - - - - - - - - - - - Lactamase_B HKD3_k127_8510021_8 929703.KE386491_gene2187 1.2e-77 267.0 COG3752@1|root,COG3752@2|Bacteria,4NJXA@976|Bacteroidetes,47PJY@768503|Cytophagia 976|Bacteroidetes S 3-oxo-5-alpha-steroid 4-dehydrogenase - - - - - - - - - - - - DUF1295 HKD3_k127_8510021_6 393305.YE1188 4.582e-97 331.0 COG0329@1|root,COG0329@2|Bacteria,1R53X@1224|Proteobacteria,1RRVA@1236|Gammaproteobacteria,41DWT@629|Yersinia 1236|Gammaproteobacteria EM Dihydrodipicolinate synthetase family nanA - 4.1.3.3 ko:K01639 ko00520,map00520 - R01811 RC00159,RC00600 ko00000,ko00001,ko01000 - - - DHDPS HKD3_k127_8510021_4 243090.RB3348 2.547e-144 467.0 COG2942@1|root,COG2942@2|Bacteria,2J1EQ@203682|Planctomycetes 203682|Planctomycetes G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) - - 5.1.3.11,5.1.3.8 ko:K01787,ko:K16213 ko00520,map00520 - R01207,R01445,R10810 RC00289,RC00290 ko00000,ko00001,ko01000 - - - GlcNAc_2-epim HKD3_k127_8510021_2 1168034.FH5T_13860 1.1e-169 559.0 COG2271@1|root,COG2271@2|Bacteria,4NFKX@976|Bacteroidetes,2FPKV@200643|Bacteroidia 976|Bacteroidetes G Transporter, major facilitator family protein - - - ko:K08191 - - - - ko00000,ko02000 2.A.1.14.2 - - MFS_1 HKD3_k127_8510021_14 323848.Nmul_A0751 1.669e-26 115.0 COG0545@1|root,COG0545@2|Bacteria,1RDA1@1224|Proteobacteria,2VSIG@28216|Betaproteobacteria,3736W@32003|Nitrosomonadales 28216|Betaproteobacteria M Peptidyl-prolyl cis-trans isomerase fkpA - 5.2.1.8 ko:K01802,ko:K03772 - - - - ko00000,ko01000,ko03110 - - - FKBP_C HKD3_k127_8510021_1 1168034.FH5T_14340 1.25e-195 625.0 COG3669@1|root,COG3669@2|Bacteria,4NE74@976|Bacteroidetes,2FMB0@200643|Bacteroidia 976|Bacteroidetes G Alpha-L-fucosidase - - 3.2.1.51 ko:K01206 ko00511,map00511 - - - ko00000,ko00001,ko01000,ko04147 - GH29 - Alpha_L_fucos HKD3_k127_8510021_21 718252.FP2_32320 2.507e-06 59.0 COG1752@1|root,COG1752@2|Bacteria,1UBYN@1239|Firmicutes,247V3@186801|Clostridia,3WJ3G@541000|Ruminococcaceae 186801|Clostridia S Psort location Cytoplasmic, score 8.96 - - - ko:K07001 - - - - ko00000 - - - Patatin HKD3_k127_8510021_19 1123377.AUIV01000011_gene2106 3.083e-16 89.0 2BQK0@1|root,32JG2@2|Bacteria,1MYHR@1224|Proteobacteria,1TD82@1236|Gammaproteobacteria,1XAAT@135614|Xanthomonadales 135614|Xanthomonadales - - - - - - - - - - - - - - - HKD3_k127_8510021_18 292415.Tbd_1579 1.083e-17 87.0 COG1531@1|root,COG1531@2|Bacteria,1N7PM@1224|Proteobacteria,2VW0Y@28216|Betaproteobacteria 28216|Betaproteobacteria AJ Protein of unknown function (DUF504) - - - - - - - - - - - - DUF504 HKD3_k127_8510021_11 706587.Desti_1672 3.053e-42 160.0 COG0432@1|root,COG0432@2|Bacteria,1N5SN@1224|Proteobacteria,42SJC@68525|delta/epsilon subdivisions,2WP9F@28221|Deltaproteobacteria,2MRXI@213462|Syntrophobacterales 28221|Deltaproteobacteria S Uncharacterised protein family UPF0047 - - - - - - - - - - - - UPF0047 HKD3_k127_8510021_7 1209072.ALBT01000032_gene2120 7.195e-90 310.0 COG2055@1|root,COG2055@2|Bacteria,1MWQY@1224|Proteobacteria,1T9WS@1236|Gammaproteobacteria,1FHUU@10|Cellvibrio 1236|Gammaproteobacteria C Malate/L-lactate dehydrogenase - - - - - - - - - - - - Ldh_2 HKD3_k127_8510021_0 290397.Adeh_1764 1.134e-223 707.0 COG3303@1|root,COG3303@2|Bacteria,1P8CP@1224|Proteobacteria,42MXS@68525|delta/epsilon subdivisions,2WKEK@28221|Deltaproteobacteria 28221|Deltaproteobacteria P Seven times multi-haem cytochrome CxxCH - - - - - - - - - - - - Cytochrome_C554,Multi-haem_cyto HKD3_k127_8510021_5 153721.MYP_1907 4.326e-118 387.0 COG0823@1|root,COG0823@2|Bacteria,4NG4S@976|Bacteroidetes,47KMG@768503|Cytophagia 976|Bacteroidetes U WD40-like Beta Propeller Repeat tolB3 - - - - - - - - - - - PD40 HKD3_k127_8510021_3 234267.Acid_4275 3.482e-147 481.0 COG1073@1|root,COG1073@2|Bacteria,3Y652@57723|Acidobacteria 57723|Acidobacteria G alpha beta - - - - - - - - - - - - - HKD3_k127_8512251_4 1267534.KB906755_gene4829 3.736e-21 106.0 COG3485@1|root,COG3485@2|Bacteria 2|Bacteria Q protocatechuate 3,4-dioxygenase activity - - - - - - - - - - - - CarboxypepD_reg,Dioxygenase_C,TonB_dep_Rec HKD3_k127_8512251_1 1267535.KB906767_gene4838 1.814e-105 368.0 COG0457@1|root,COG3119@1|root,COG0457@2|Bacteria,COG3119@2|Bacteria 2|Bacteria P arylsulfatase activity - - - - - - - - - - - - Sulfatase,TPR_1,TPR_11,TPR_16,TPR_19,TPR_2,TPR_8 HKD3_k127_8512251_0 1254432.SCE1572_37375 1.334e-174 566.0 COG0122@1|root,COG2169@1|root,COG0122@2|Bacteria,COG2169@2|Bacteria,1QTXM@1224|Proteobacteria,42N8C@68525|delta/epsilon subdivisions,2WM3N@28221|Deltaproteobacteria,2YUFY@29|Myxococcales 28221|Deltaproteobacteria K AlkA N-terminal domain - - 3.2.2.21 ko:K13529,ko:K13530 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03000,ko03400 - - - Ada_Zn_binding,AlkA_N,HTH_18,HhH-GPD HKD3_k127_8512251_3 1101192.KB910516_gene1525 8.496e-50 194.0 COG0350@1|root,COG0350@2|Bacteria,1N2YQ@1224|Proteobacteria,2TRRN@28211|Alphaproteobacteria,1JURW@119045|Methylobacteriaceae 28211|Alphaproteobacteria L 6-O-methylguanine DNA methyltransferase, DNA binding domain ogt - 2.1.1.63 ko:K00567 - - - - ko00000,ko01000,ko03400 - - - DNA_binding_1,Methyltransf_1N HKD3_k127_8512251_2 1047013.AQSP01000126_gene2731 6.245e-50 184.0 COG0446@1|root,COG1142@1|root,COG1251@1|root,COG2080@1|root,COG0446@2|Bacteria,COG1142@2|Bacteria,COG1251@2|Bacteria,COG2080@2|Bacteria,2NP2E@2323|unclassified Bacteria 2|Bacteria C FAD dependent oxidoreductase - - 1.12.5.1,1.2.5.3,1.3.99.16,1.7.1.15 ko:K00205,ko:K00362,ko:K02573,ko:K03518,ko:K05927,ko:K07302 ko00680,ko00910,ko01100,ko01120,ko01200,map00680,map00910,map01100,map01120,map01200 M00530,M00567 R00787,R03015,R08060,R11168,R11743 RC00176,RC00197,RC00323,RC02800 ko00000,ko00001,ko00002,ko01000 - - - Fer2,Fer2_2,Fer2_4,Fer2_BFD,Fer4,Fer4_20,Fer4_7,GXGXG,NiFe_hyd_SSU_C,Oxidored_q6,Pyr_redox_2 HKD3_k127_8515033_35 463191.SSEG_10365 0.0003622 52.0 COG1366@1|root,COG1366@2|Bacteria,2IR28@201174|Actinobacteria 201174|Actinobacteria T Belongs to the anti-sigma-factor antagonist family - - - - - - - - - - - - STAS_2 HKD3_k127_8515033_32 583355.Caka_3112 8.233e-15 85.0 COG1285@1|root,COG1285@2|Bacteria,46VKA@74201|Verrucomicrobia 74201|Verrucomicrobia S Domain of unknown function (DUF4956) - - - - - - - - - - - - DUF4956 HKD3_k127_8515033_18 671143.DAMO_1104 3.884e-50 197.0 COG3746@1|root,COG3746@2|Bacteria,2NRQ1@2323|unclassified Bacteria 2|Bacteria P phosphate-selective porin O and P - - - ko:K07221 - - - - ko00000,ko02000 1.B.5.1 - - Porin_O_P HKD3_k127_8515033_14 234267.Acid_4036 2.339e-61 227.0 COG5337@1|root,COG5337@2|Bacteria 2|Bacteria M Spore coat protein CotH - - - - - - - - - - - - CotH,Lectin_C HKD3_k127_8515033_6 1519464.HY22_08585 1.206e-100 347.0 COG0248@1|root,COG0248@2|Bacteria,1FDDR@1090|Chlorobi 1090|Chlorobi FP PFAM Ppx GppA phosphatase - - 3.6.1.11,3.6.1.40 ko:K01524 ko00230,map00230 - R03409 RC00002 ko00000,ko00001,ko01000 - - - HD,Ppx-GppA HKD3_k127_8515033_12 1267535.KB906767_gene4620 9.019e-64 231.0 COG2234@1|root,COG2234@2|Bacteria,3Y406@57723|Acidobacteria,2JIRZ@204432|Acidobacteriia 204432|Acidobacteriia S Peptidase family M28 - - - - - - - - - - - - Peptidase_M28 HKD3_k127_8515033_9 234267.Acid_1856 4.374e-70 260.0 COG1716@1|root,COG2203@1|root,COG2208@1|root,COG1716@2|Bacteria,COG2203@2|Bacteria,COG2208@2|Bacteria,3Y45M@57723|Acidobacteria 57723|Acidobacteria T Inner membrane component of T3SS, cytoplasmic domain - - - - - - - - - - - - FHA,GAF_2,SpoIIE HKD3_k127_8515033_31 269799.Gmet_1151 3.183e-15 85.0 COG0705@1|root,COG0705@2|Bacteria,1MYFP@1224|Proteobacteria,42P0V@68525|delta/epsilon subdivisions,2WJGR@28221|Deltaproteobacteria,43TXX@69541|Desulfuromonadales 28221|Deltaproteobacteria S Rhomboid family - - - ko:K07059 - - - - ko00000 - - - DnaJ_C,Rhomboid HKD3_k127_8515033_28 469383.Cwoe_5897 1.091e-25 122.0 COG5542@1|root,COG5542@2|Bacteria,2HNS4@201174|Actinobacteria,4CPZM@84995|Rubrobacteria 84995|Rubrobacteria S Mannosyltransferase (PIG-V) - - - - - - - - - - - - Mannosyl_trans2 HKD3_k127_8515033_0 323261.Noc_1459 1.297e-311 991.0 COG0265@1|root,COG0308@1|root,COG2234@1|root,COG0265@2|Bacteria,COG0308@2|Bacteria,COG2234@2|Bacteria,1MV86@1224|Proteobacteria,1SYTD@1236|Gammaproteobacteria,1X2IM@135613|Chromatiales 135613|Chromatiales EO Peptidase family M28 - - - - - - - - - - - - PDZ_2,Peptidase_M1,Peptidase_M28 HKD3_k127_8515033_17 1047013.AQSP01000099_gene1507 2.828e-54 211.0 COG3016@1|root,COG3016@2|Bacteria,2NRWX@2323|unclassified Bacteria 2|Bacteria S Haem-binding uptake, Tiki superfamily, ChaN - - - - - - - - - - - - Cofac_haem_bdg,PDZ_2 HKD3_k127_8515033_1 671143.DAMO_2624 1.665e-234 751.0 COG0466@1|root,COG0466@2|Bacteria,2NNNN@2323|unclassified Bacteria 2|Bacteria O ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner lon - 3.4.21.53 ko:K01338 ko04112,map04112 - - - ko00000,ko00001,ko01000,ko01002 - - - AAA,LON_substr_bdg,Lon_C HKD3_k127_8515033_11 1232410.KI421412_gene406 1.159e-66 246.0 COG1193@1|root,COG1193@2|Bacteria,1QYV7@1224|Proteobacteria 1224|Proteobacteria L Glycosyl transferase family 1 - - - - - - - - - - - - - HKD3_k127_8515033_25 446470.Snas_1211 8.3e-33 136.0 COG3963@1|root,COG3963@2|Bacteria,2I93P@201174|Actinobacteria 2|Bacteria I Phospholipid N-methyltransferase - - - - - - - - - - - - Methyltransf_21,Methyltransf_25,RrnaAD HKD3_k127_8515033_30 1261545.MBE-HAL_0470 2.053e-19 98.0 COG2129@1|root,arCOG01145@2157|Archaea,2XV9E@28890|Euryarchaeota,23V3B@183963|Halobacteria 183963|Halobacteria S phosphoesterases, related to the Icc protein - - - - - - - - - - - - Metallophos,Metallophos_2 HKD3_k127_8515033_19 671143.DAMO_1604 3.099e-48 177.0 COG1143@1|root,COG1143@2|Bacteria,2NPQR@2323|unclassified Bacteria 2|Bacteria C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoI GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.6.5.3 ko:K00337,ko:K00338 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - iNJ661.Rv3153 Fer4 HKD3_k127_8515033_7 204669.Acid345_4032 2.272e-97 336.0 COG2972@1|root,COG2972@2|Bacteria,3Y3NH@57723|Acidobacteria,2JHT4@204432|Acidobacteriia 204432|Acidobacteriia T Histidine kinase - - 2.7.13.3 ko:K02478 - - - - ko00000,ko01000,ko01001,ko02022 - - - 5TM-5TMR_LYT,HATPase_c,His_kinase HKD3_k127_8515033_10 204669.Acid345_1001 9.574e-69 244.0 COG3279@1|root,COG3279@2|Bacteria,3Y3HR@57723|Acidobacteria,2JIXA@204432|Acidobacteriia 204432|Acidobacteriia T Two component transcriptional regulator, LytTR family - - - ko:K02477,ko:K07705 ko02020,map02020 M00492 - - ko00000,ko00001,ko00002,ko02022 - - - LytTR,Response_reg HKD3_k127_8515033_23 234267.Acid_0799 8.029e-39 156.0 COG0681@1|root,COG0681@2|Bacteria,3Y49Z@57723|Acidobacteria 57723|Acidobacteria U Belongs to the peptidase S26 family - - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24 HKD3_k127_8515033_4 290397.Adeh_2886 1.512e-144 479.0 COG1022@1|root,COG1022@2|Bacteria,1MU4D@1224|Proteobacteria,42N2G@68525|delta/epsilon subdivisions,2WIXB@28221|Deltaproteobacteria 28221|Deltaproteobacteria I PFAM AMP-dependent synthetase and ligase - - 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding HKD3_k127_8515033_13 644966.Tmar_1095 3.591e-63 236.0 COG0111@1|root,COG0111@2|Bacteria,1TSDK@1239|Firmicutes,247Q4@186801|Clostridia 186801|Clostridia EH D-isomer specific 2-hydroxyacid dehydrogenase - - 1.1.1.79,1.1.1.81 ko:K12972 ko00260,ko00620,ko00630,ko01100,ko01110,ko01120,map00260,map00620,map00630,map01100,map01110,map01120 - R00465,R01388,R01392,R02527 RC00031,RC00042,RC00670 ko00000,ko00001,ko01000 - - - 2-Hacid_dh,2-Hacid_dh_C HKD3_k127_8515033_20 1449076.JOOE01000001_gene2320 8.73e-46 173.0 COG0315@1|root,COG0315@2|Bacteria,1RCYZ@1224|Proteobacteria,2U747@28211|Alphaproteobacteria,2K4GG@204457|Sphingomonadales 204457|Sphingomonadales H Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) moaC - 4.6.1.17 ko:K03637 ko00790,ko01100,ko04122,map00790,map01100,map04122 - R11372 RC03425 ko00000,ko00001,ko01000 - - - MoaC HKD3_k127_8515033_2 204669.Acid345_4203 1.136e-232 743.0 COG1297@1|root,COG1297@2|Bacteria,3Y2UT@57723|Acidobacteria,2JHIU@204432|Acidobacteriia 204432|Acidobacteriia S Oligopeptide transporter OPT - - - - - - - - - - - - OPT HKD3_k127_8515033_24 1167006.UWK_03182 1.89e-35 157.0 28JRZ@1|root,2Z9HI@2|Bacteria,1R52Z@1224|Proteobacteria,42R46@68525|delta/epsilon subdivisions,2WMF2@28221|Deltaproteobacteria,2MHVF@213118|Desulfobacterales 28221|Deltaproteobacteria S Domain of unknown function (DUF4126) - - - - - - - - - - - - DUF4126 HKD3_k127_8515033_22 204669.Acid345_0553 8.836e-45 170.0 COG1329@1|root,COG1329@2|Bacteria,3Y4ZG@57723|Acidobacteria,2JMXA@204432|Acidobacteriia 204432|Acidobacteriia K CarD-like/TRCF domain - - - ko:K07736 - - - - ko00000,ko03000 - - - CarD_CdnL_TRCF HKD3_k127_8515033_26 517418.Ctha_0991 3.982e-31 142.0 COG1629@1|root,COG4771@2|Bacteria 2|Bacteria P TonB-dependent receptor - - - ko:K02014,ko:K16087 - - - - ko00000,ko02000 1.B.14,1.B.14.2 - - CarbopepD_reg_2,Plug,TonB_dep_Rec HKD3_k127_8515033_3 640512.BC1003_0729 1.621e-198 625.0 COG3328@1|root,COG3328@2|Bacteria,1MU4P@1224|Proteobacteria,2VKD6@28216|Betaproteobacteria,1K2MR@119060|Burkholderiaceae 28216|Betaproteobacteria L PFAM transposase mutator type - - - - - - - - - - - - Transposase_mut HKD3_k127_8515033_15 694427.Palpr_1632 2.483e-61 218.0 2DMP1@1|root,32SS8@2|Bacteria,4NQY9@976|Bacteroidetes,2FUWG@200643|Bacteroidia 976|Bacteroidetes S Belongs to the UPF0311 family - - - - - - - - - - - - DUF3237 HKD3_k127_8515033_8 913325.N799_04975 1.985e-87 298.0 COG2801@1|root,COG2801@2|Bacteria,1MVXQ@1224|Proteobacteria,1RR4F@1236|Gammaproteobacteria,1X5HK@135614|Xanthomonadales 135614|Xanthomonadales L Transposase and inactivated derivatives - - - ko:K07497 - - - - ko00000 - - - HTH_21,rve HKD3_k127_8515033_5 1173020.Cha6605_0968 2.629e-116 386.0 COG2267@1|root,COG2267@2|Bacteria,1G771@1117|Cyanobacteria 2|Bacteria I Alpha/beta hydrolase family - - - - - - - - - - - - Abhydrolase_1,Hydrolase_4 HKD3_k127_8515033_21 886293.Sinac_7080 3.062e-45 171.0 COG3832@1|root,COG3832@2|Bacteria,2J0ET@203682|Planctomycetes 203682|Planctomycetes S Activator of Hsp90 ATPase homolog 1-like protein - - - - - - - - - - - - AHSA1 HKD3_k127_8515033_29 338969.Rfer_0057 5.117e-22 106.0 COG5455@1|root,COG5455@2|Bacteria,1RJ9A@1224|Proteobacteria,2VRVC@28216|Betaproteobacteria,4AF8K@80864|Comamonadaceae 28216|Betaproteobacteria T Histidine kinase - - - - - - - - - - - - RcnB HKD3_k127_8515033_16 1267535.KB906767_gene423 4.709e-59 209.0 COG1649@1|root,COG1649@2|Bacteria,3Y6SC@57723|Acidobacteria,2JM8G@204432|Acidobacteriia 204432|Acidobacteriia S Hypothetical glycosyl hydrolase 6 - - - - - - - - - - - - GHL6,Glyco_hydro_42M HKD3_k127_8523926_1 452637.Oter_4283 2.968e-310 970.0 COG0657@1|root,COG0657@2|Bacteria,46TU9@74201|Verrucomicrobia,3KA3K@414999|Opitutae 414999|Opitutae I Glycosyl hydrolase family 65, N-terminal domain - - 3.2.1.51 ko:K15923 ko00511,map00511 - - - ko00000,ko00001,ko01000 - GH95 - Glyco_hyd_65N_2 HKD3_k127_8523926_9 575540.Isop_0606 4.015e-38 156.0 COG1413@1|root,COG1413@2|Bacteria,2J0ZX@203682|Planctomycetes 203682|Planctomycetes C Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 HKD3_k127_8523926_5 909663.KI867150_gene1590 3.9e-128 428.0 COG1538@1|root,COG1538@2|Bacteria,1MUA8@1224|Proteobacteria,42NKZ@68525|delta/epsilon subdivisions,2WIRB@28221|Deltaproteobacteria,2MQZS@213462|Syntrophobacterales 28221|Deltaproteobacteria M PFAM Outer membrane efflux protein - - - ko:K18139 ko01501,ko02024,map01501,map02024 M00642,M00643,M00647,M00718,M00768,M00822 - - ko00000,ko00001,ko00002,ko01504,ko02000 1.B.17,2.A.6.2 - - OEP HKD3_k127_8523926_0 903818.KI912268_gene3319 0.0 1485.0 COG0841@1|root,COG0841@2|Bacteria,3Y2TW@57723|Acidobacteria 57723|Acidobacteria V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran HKD3_k127_8523926_4 56780.SYN_02075 2.623e-133 436.0 COG0845@1|root,COG0845@2|Bacteria,1MU78@1224|Proteobacteria,42NHV@68525|delta/epsilon subdivisions,2WJBA@28221|Deltaproteobacteria,2MR20@213462|Syntrophobacterales 28221|Deltaproteobacteria M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family acrA - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - Biotin_lipoyl_2,HlyD,HlyD_3,HlyD_D23 HKD3_k127_8523926_11 667014.Thein_0138 2.457e-16 87.0 COG1309@1|root,COG1309@2|Bacteria,2GIHE@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria K Domain of unknown function (DUF1956) - - - - - - - - - - - - DUF1956,TetR_N HKD3_k127_8523926_7 1131730.BAVI_16857 8.991e-64 237.0 COG2159@1|root,COG2159@2|Bacteria,1UZI6@1239|Firmicutes 1239|Firmicutes G Amidohydrolase - - - - - - - - - - - - Amidohydro_2 HKD3_k127_8523926_10 1054217.TALC_00596 1.977e-28 120.0 COG1545@1|root,arCOG01285@2157|Archaea,2XXGF@28890|Euryarchaeota,241SY@183967|Thermoplasmata 183967|Thermoplasmata V DUF35 OB-fold domain, acyl-CoA-associated - - - ko:K07068 - - - - ko00000 - - - DUF35_N,OB_aCoA_assoc HKD3_k127_8523926_3 269797.Mbar_A0550 1.555e-134 438.0 COG0183@1|root,arCOG01278@2157|Archaea,2XT38@28890|Euryarchaeota,2N94P@224756|Methanomicrobia 224756|Methanomicrobia I PFAM Thiolase - - 2.3.1.9 ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 M00088,M00095,M00373,M00374,M00375 R00238,R01177 RC00004,RC00326 ko00000,ko00001,ko00002,ko01000,ko04147 - - iAF692.Mbar_A0550 Thiolase_C,Thiolase_N HKD3_k127_8523926_2 523845.AQXV01000053_gene747 5.702e-138 447.0 COG3425@1|root,arCOG01767@2157|Archaea,2XTWE@28890|Euryarchaeota,23Q7Q@183939|Methanococci 183939|Methanococci I Belongs to the UPF0219 family - - 2.3.3.10 ko:K01641 ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130 M00088,M00095 R01978 RC00004,RC00503 ko00000,ko00001,ko00002,ko01000 - - - ACP_syn_III_C,HMG_CoA_synt_N HKD3_k127_8523926_6 497964.CfE428DRAFT_6227 1.44e-76 266.0 COG0676@1|root,COG0676@2|Bacteria,46VKE@74201|Verrucomicrobia 74201|Verrucomicrobia G Aldose 1-epimerase - - 5.1.3.15 ko:K01792 ko00010,ko01100,ko01110,ko01120,ko01130,map00010,map01100,map01110,map01120,map01130 - R02739 RC00563 ko00000,ko00001,ko01000 - - - Aldose_epim HKD3_k127_8523926_8 1121920.AUAU01000017_gene1231 3.154e-50 185.0 COG2259@1|root,COG2259@2|Bacteria 2|Bacteria S methylamine metabolic process Z012_09115 - - ko:K15977 - - - - ko00000 - - - DoxX HKD3_k127_8523926_12 1123269.NX02_27290 1.93e-13 72.0 COG1785@1|root,COG1785@2|Bacteria,1MXI2@1224|Proteobacteria,2TTUZ@28211|Alphaproteobacteria,2K1RI@204457|Sphingomonadales 204457|Sphingomonadales P Belongs to the alkaline phosphatase family - - 3.1.3.1 ko:K01077 ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020 M00126 R02135,R04620 RC00017 ko00000,ko00001,ko00002,ko00537,ko01000,ko04147 - - - Alk_phosphatase HKD3_k127_8532786_2 316067.Geob_3549 9.315e-38 141.0 COG0372@1|root,COG0372@2|Bacteria,1MUKX@1224|Proteobacteria,42N8U@68525|delta/epsilon subdivisions,2WJAN@28221|Deltaproteobacteria,43UBB@69541|Desulfuromonadales 28221|Deltaproteobacteria H Belongs to the citrate synthase family gltA - 2.3.3.1 ko:K01647 ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00740 R00351 RC00004,RC00067 br01601,ko00000,ko00001,ko00002,ko01000 - - - Citrate_synt HKD3_k127_8532786_1 641524.ADICYQ_0766 3.973e-158 505.0 COG3507@1|root,COG3507@2|Bacteria,4NEIZ@976|Bacteroidetes,47NFQ@768503|Cytophagia 976|Bacteroidetes G Belongs to the glycosyl hydrolase 43 family - - - - - - - - - - - - Glyco_hydro_43 HKD3_k127_8532786_0 1191523.MROS_1690 3.338e-184 589.0 COG0280@1|root,COG0281@1|root,COG0280@2|Bacteria,COG0281@2|Bacteria 2|Bacteria C malic enzyme maeB GO:0003674,GO:0003824,GO:0004470,GO:0004473,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0055114 1.1.1.38,1.1.1.40,2.3.1.8 ko:K00027,ko:K00029,ko:K00625,ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,ko02020,map00430,map00620,map00640,map00680,map00710,map00720,map01100,map01120,map01200,map02020 M00169,M00172,M00357,M00579 R00214,R00216,R00230,R00921 RC00004,RC00105,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_1637 Malic_M,PTA_PTB,malic HKD3_k127_8549205_3 639030.JHVA01000001_gene837 9.87e-08 60.0 COG1629@1|root,COG4771@2|Bacteria,3Y7A5@57723|Acidobacteria,2JKGX@204432|Acidobacteriia 204432|Acidobacteriia P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg,Plug HKD3_k127_8549205_1 1123073.KB899241_gene2627 2.276e-74 270.0 COG2755@1|root,COG2755@2|Bacteria,1RE9P@1224|Proteobacteria,1SF9P@1236|Gammaproteobacteria,1X5EE@135614|Xanthomonadales 135614|Xanthomonadales E GDSL-like Lipase/Acylhydrolase - - - - - - - - - - - - Lipase_GDSL_2 HKD3_k127_8549205_0 1492737.FEM08_17300 4.454e-240 766.0 COG3525@1|root,COG3525@2|Bacteria,4NEQN@976|Bacteroidetes,1HWKP@117743|Flavobacteriia,2NSVQ@237|Flavobacterium 976|Bacteroidetes G Domain of unknown function (DUF4838) - - - - - - - - - - - - DUF4838,F5_F8_type_C,Glyco_hydro_20b,Glyco_hydro_67N HKD3_k127_8549205_2 660470.Theba_0493 6.706e-41 154.0 COG4690@1|root,COG4690@2|Bacteria 2|Bacteria E dipeptidase activity - - - - - - - - - - - - Peptidase_C69 HKD3_k127_8551750_0 204669.Acid345_3245 2.737e-187 592.0 COG0296@1|root,COG2382@1|root,COG0296@2|Bacteria,COG2382@2|Bacteria,3Y2ZN@57723|Acidobacteria,2JP2N@204432|Acidobacteriia 204432|Acidobacteriia GP Putative esterase - - - ko:K07214 - - - - ko00000 - - - Esterase HKD3_k127_8551750_1 709986.Deima_0117 2.027e-130 433.0 COG4188@1|root,COG4188@2|Bacteria 2|Bacteria KT dienelactone hydrolase - - - - - - - - - - - - PAF-AH_p_II HKD3_k127_8565505_1 666685.R2APBS1_2150 7.672e-20 94.0 COG1087@1|root,COG1087@2|Bacteria,1MUHI@1224|Proteobacteria,1RMTU@1236|Gammaproteobacteria,1X5QC@135614|Xanthomonadales 135614|Xanthomonadales M Male sterility protein - - 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 - - - Epimerase HKD3_k127_8565505_0 243365.CV_1007 5.331e-126 411.0 COG2334@1|root,COG2334@2|Bacteria,1MU2Q@1224|Proteobacteria,2VI9A@28216|Betaproteobacteria,2KQPE@206351|Neisseriales 206351|Neisseriales F A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response srkA - - - - - - - - - - - APH HKD3_k127_8569190_2 204669.Acid345_2395 3.548e-82 289.0 COG0457@1|root,COG0515@1|root,COG5616@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,COG5616@2|Bacteria 2|Bacteria S cAMP biosynthetic process - - 2.7.11.1 ko:K08282,ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase,TPR_16,TPR_2,TPR_8 HKD3_k127_8569190_5 278957.ABEA03000091_gene676 4.634e-52 195.0 COG1451@1|root,COG1451@2|Bacteria,46VW6@74201|Verrucomicrobia,3K7I9@414999|Opitutae 414999|Opitutae S Protein of unknown function DUF45 - - - ko:K07043 - - - - ko00000 - - - DUF45 HKD3_k127_8569190_4 1089550.ATTH01000001_gene1831 5.351e-58 225.0 COG0515@1|root,COG0515@2|Bacteria,4NPN9@976|Bacteroidetes,1FJI6@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes KLT Protein tyrosine kinase - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - NERD,Pkinase,TPR_12,TPR_8 HKD3_k127_8569190_1 1047013.AQSP01000097_gene1963 1.27e-126 433.0 COG2091@1|root,COG2091@2|Bacteria,2NQ9X@2323|unclassified Bacteria 2|Bacteria H Carbohydrate family 9 binding domain-like - - - - - - - - - - - - CBM9_1 HKD3_k127_8569190_0 237609.PSAKL28_25280 3.018e-155 534.0 COG4623@1|root,COG4623@2|Bacteria,1MWDS@1224|Proteobacteria,1RM8W@1236|Gammaproteobacteria 1236|Gammaproteobacteria M Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella mltF2 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - ko:K18691 - - - - ko00000,ko01000,ko01011 - - - SBP_bac_3,SLT HKD3_k127_8569190_3 1234364.AMSF01000070_gene2161 2.52e-81 284.0 COG0111@1|root,COG0111@2|Bacteria,1MU5Z@1224|Proteobacteria,1RPEY@1236|Gammaproteobacteria,1X4WZ@135614|Xanthomonadales 1236|Gammaproteobacteria EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family - - 1.1.1.399,1.1.1.95 ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R01513 RC00031 ko00000,ko00001,ko00002,ko01000,ko04147 - - - 2-Hacid_dh,2-Hacid_dh_C HKD3_k127_8569190_7 485916.Dtox_1160 0.00013 51.0 2C539@1|root,33HA4@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_8569190_6 195253.Syn6312_1997 5.738e-14 73.0 2E5P1@1|root,330DP@2|Bacteria,1G84E@1117|Cyanobacteria,1H1KP@1129|Synechococcus 1117|Cyanobacteria S Protein of unknown function (DUF2442) - - - - - - - - - - - - DUF2442 HKD3_k127_8597975_1 234267.Acid_2413 3.675e-60 218.0 COG3212@1|root,COG3212@2|Bacteria 2|Bacteria T peptidase - - - - - - - - - - - - PepSY HKD3_k127_8597975_3 1294143.H681_11855 6.184e-29 131.0 COG1538@1|root,COG1538@2|Bacteria,1NEZC@1224|Proteobacteria,1RZB6@1236|Gammaproteobacteria 1236|Gammaproteobacteria MU COG1538 Outer membrane protein czcC - - ko:K15725 - - - - ko00000,ko02000 1.B.17.2.2 - - OEP HKD3_k127_8597975_2 1344012.ATMI01000041_gene304 9.251e-30 132.0 COG0845@1|root,COG0845@2|Bacteria,1MW65@1224|Proteobacteria,1RQ67@1236|Gammaproteobacteria,4BU12@82986|Tatumella 1236|Gammaproteobacteria M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family mdtA GO:0008150,GO:0008219,GO:0009987,GO:0012501 - ko:K07799,ko:K21135 ko02020,map02020 M00648,M00822 - - ko00000,ko00001,ko00002,ko02000 2.A.6.2.35,8.A.1 - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 HKD3_k127_8597975_0 861299.J421_1964 5.328e-70 258.0 COG0841@1|root,COG0841@2|Bacteria 2|Bacteria V transmembrane transporter activity swrC - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran HKD3_k127_8605799_0 234267.Acid_7736 4.948e-64 239.0 COG4206@1|root,COG4206@2|Bacteria 2|Bacteria H cobalamin-transporting ATPase activity - - - - - - - - - - - - CarbopepD_reg_2,Plug HKD3_k127_8605799_1 642492.Clole_1154 0.0001025 46.0 COG1433@1|root,COG1433@2|Bacteria,1V7KS@1239|Firmicutes,24J98@186801|Clostridia 186801|Clostridia S TIGRFAM C_GCAxxG_C_C family - - - - - - - - - - - - C_GCAxxG_C_C HKD3_k127_8610631_8 1123371.ATXH01000012_gene1431 9.54e-40 149.0 COG1158@1|root,COG1158@2|Bacteria,2GGXS@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template rho - - ko:K03628 ko03018,map03018 - - - ko00000,ko00001,ko03019,ko03021 - - - ATP-synt_ab,Rho_N,Rho_RNA_bind HKD3_k127_8610631_3 861299.J421_1606 5.146e-130 422.0 COG0667@1|root,COG0667@2|Bacteria 2|Bacteria C Aldo Keto reductase ydjG - - - - - - - - - - - Aldo_ket_red HKD3_k127_8610631_9 555079.Toce_2074 2.597e-26 111.0 COG0254@1|root,COG0254@2|Bacteria,1VEGU@1239|Firmicutes,24QNZ@186801|Clostridia,42H2T@68295|Thermoanaerobacterales 186801|Clostridia J Binds the 23S rRNA rpmE - - ko:K02909 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L31 HKD3_k127_8610631_1 760192.Halhy_0394 2.754e-262 832.0 COG1554@1|root,COG1554@2|Bacteria,4NEWW@976|Bacteroidetes,1IQS8@117747|Sphingobacteriia 976|Bacteroidetes G Alpha-L-fucosidase - - 3.2.1.51 ko:K15923 ko00511,map00511 - - - ko00000,ko00001,ko01000 - GH95 - Glyco_hyd_65N_2 HKD3_k127_8610631_4 234267.Acid_2378 1.845e-110 370.0 COG1680@1|root,COG1680@2|Bacteria 2|Bacteria V peptidase activity - - - - - - - - - - - - Beta-lactamase,Fib_succ_major HKD3_k127_8610631_5 861299.J421_1618 4.399e-104 356.0 COG1680@1|root,COG1680@2|Bacteria,1ZTJS@142182|Gemmatimonadetes 142182|Gemmatimonadetes V Beta-lactamase - - - - - - - - - - - - Beta-lactamase HKD3_k127_8610631_7 633149.Bresu_1257 5.483e-49 181.0 2DEWU@1|root,2ZPJP@2|Bacteria,1N6PP@1224|Proteobacteria,2UI8P@28211|Alphaproteobacteria,2KJAY@204458|Caulobacterales 204458|Caulobacterales - - - - - - - - - - - - - - - HKD3_k127_8610631_0 234267.Acid_1582 7.668e-311 962.0 COG2936@1|root,COG2936@2|Bacteria,3Y684@57723|Acidobacteria 57723|Acidobacteria S X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - ko:K06978 - - - - ko00000 - - - PepX_C,Peptidase_S15 HKD3_k127_8610631_6 56780.SYN_00384 4.718e-49 193.0 COG3359@1|root,COG3359@2|Bacteria,1R5KG@1224|Proteobacteria,4309C@68525|delta/epsilon subdivisions,2WVJ7@28221|Deltaproteobacteria 28221|Deltaproteobacteria L RNase_H superfamily - - - ko:K07502 - - - - ko00000 - - - RNase_H_2 HKD3_k127_8610631_2 234267.Acid_0769 2.344e-148 482.0 COG1111@1|root,COG1205@1|root,COG1111@2|Bacteria,COG1205@2|Bacteria,3Y61D@57723|Acidobacteria 57723|Acidobacteria L Domain of unknown function (DUF1998) - - - ko:K06877 - - - - ko00000 - - - DEAD,DUF1998,Helicase_C HKD3_k127_8610901_1 379066.GAU_3104 4.091e-35 147.0 COG1196@1|root,COG1196@2|Bacteria,1ZU8V@142182|Gemmatimonadetes 142182|Gemmatimonadetes D nuclear chromosome segregation - - - - - - - - - - - - - HKD3_k127_8610901_0 1379270.AUXF01000001_gene2297 4.552e-82 299.0 COG1572@1|root,COG2304@1|root,COG1572@2|Bacteria,COG2304@2|Bacteria,1ZUB7@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Aerotolerance regulator N-terminal - - - - - - - - - - - - BatA,VWA_2 HKD3_k127_8617718_4 521098.Aaci_2000 3.815e-80 270.0 COG0481@1|root,COG0481@2|Bacteria,1TP0G@1239|Firmicutes,4HASA@91061|Bacilli,2788E@186823|Alicyclobacillaceae 91061|Bacilli M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner lepA - - ko:K03596 ko05134,map05134 - - - ko00000,ko00001 - - - EFG_C,EFG_II,GTP_EFTU,GTP_EFTU_D2,LepA_C HKD3_k127_8617718_0 290397.Adeh_0670 2.327e-184 595.0 COG1215@1|root,COG1215@2|Bacteria,1MX08@1224|Proteobacteria,42MS6@68525|delta/epsilon subdivisions,2WIYE@28221|Deltaproteobacteria,2YUMA@29|Myxococcales 28221|Deltaproteobacteria M Glycosyl transferase family 21 - - - - - - - - - - - - Glyco_tranf_2_3 HKD3_k127_8617718_3 401526.TcarDRAFT_1531 1.161e-81 279.0 COG1691@1|root,COG1691@2|Bacteria,1TP0Z@1239|Firmicutes,4H25Y@909932|Negativicutes 909932|Negativicutes S AIR carboxylase - - - ko:K06898 - - - - ko00000 - - - AIRC HKD3_k127_8617718_1 997346.HMPREF9374_0020 6.888e-132 452.0 COG1193@1|root,COG1193@2|Bacteria,1TP5W@1239|Firmicutes,4H9NZ@91061|Bacilli,27AZ8@186824|Thermoactinomycetaceae 91061|Bacilli L Small MutS-related domain mutS2 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - ko:K07456 ko03430,map03430 - - - ko00000,ko00001,ko03400 - - - MutS_V,Smr HKD3_k127_8617718_2 1267533.KB906741_gene516 9.686e-100 368.0 COG0358@1|root,COG0358@2|Bacteria,3Y366@57723|Acidobacteria,2JIHT@204432|Acidobacteriia 204432|Acidobacteriia L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication dnaG - - ko:K02316 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - DnaB_bind,Toprim_2,Toprim_N,zf-CHC2 HKD3_k127_8620609_0 1396418.BATQ01000106_gene5318 9.979e-109 357.0 COG1966@1|root,COG1966@2|Bacteria,46SC3@74201|Verrucomicrobia,2IU78@203494|Verrucomicrobiae 203494|Verrucomicrobiae T 5TM C-terminal transporter carbon starvation CstA - - - - - - - - - - - - CstA,CstA_5TM HKD3_k127_8620609_2 1123376.AUIU01000014_gene713 6.266e-56 216.0 COG0500@1|root,COG0500@2|Bacteria,3J1BA@40117|Nitrospirae 40117|Nitrospirae Q Thiopurine S-methyltransferase (TPMT) - - - - - - - - - - - - - HKD3_k127_8620609_1 379066.GAU_0097 5.154e-98 348.0 COG2234@1|root,COG2234@2|Bacteria 2|Bacteria DZ aminopeptidase activity - - - ko:K07004 - - - - ko00000 - - - PKD,PPC,Peptidase_M10,Peptidase_M28,SLH HKD3_k127_8626806_0 1047013.AQSP01000142_gene204 4.407e-78 267.0 COG1082@1|root,COG1082@2|Bacteria 2|Bacteria G myo-inosose-2 dehydratase activity - - - - - - - - - - - - AP_endonuc_2 HKD3_k127_8626806_1 1047013.AQSP01000126_gene2736 1.097e-77 270.0 COG1028@1|root,COG1028@2|Bacteria,2NQUH@2323|unclassified Bacteria 2|Bacteria IQ Enoyl-(Acyl carrier protein) reductase - - - - - - - - - - - - adh_short_C2 HKD3_k127_8626806_2 1045855.DSC_07845 5.024e-05 56.0 COG3408@1|root,COG3408@2|Bacteria,1QU1Q@1224|Proteobacteria,1RRX2@1236|Gammaproteobacteria,1X4YN@135614|Xanthomonadales 135614|Xanthomonadales G coagulation factor 5 8 type - - - - - - - - - - - - Bac_rhamnosid6H,F5_F8_type_C,GDE_C HKD3_k127_8626806_3 1163408.UU9_14590 0.0002007 54.0 COG3459@1|root,COG3459@2|Bacteria,1MVNX@1224|Proteobacteria,1RMW9@1236|Gammaproteobacteria,1X3E9@135614|Xanthomonadales 135614|Xanthomonadales G COG3459 Cellobiose phosphorylase - - - - - - - - - - - - Glyco_hydro_36,Glyco_transf_36,Glycoamylase HKD3_k127_86437_3 706587.Desti_4777 1.576e-52 207.0 COG0471@1|root,COG1055@1|root,COG0471@2|Bacteria,COG1055@2|Bacteria,1N58G@1224|Proteobacteria 1224|Proteobacteria P Symporter - - - - - - - - - - - - Na_sulph_symp HKD3_k127_86437_0 671143.DAMO_1876 8.573e-163 524.0 COG2204@1|root,COG2204@2|Bacteria 2|Bacteria T phosphorelay signal transduction system nla6 - - ko:K02481 - - - - ko00000,ko02022 - - - HTH_8,Response_reg,Sigma54_activat HKD3_k127_86437_2 671143.DAMO_1877 6.575e-85 304.0 COG5000@1|root,COG5000@2|Bacteria,2NQZA@2323|unclassified Bacteria 2|Bacteria T Multi-sensor signal transduction histidine kinase ntrB - 2.7.13.3 ko:K07710 ko02020,map02020 M00500 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HATPase_c,HisKA,PAS,PAS_4,PAS_8 HKD3_k127_86437_1 1304872.JAGC01000003_gene2364 1.542e-139 468.0 28I8B@1|root,2Z8B5@2|Bacteria,1MUNM@1224|Proteobacteria,42NZH@68525|delta/epsilon subdivisions,2WKHB@28221|Deltaproteobacteria,2M9ZJ@213115|Desulfovibrionales 28221|Deltaproteobacteria P Cytochrome c bacterial - - - - - - - - - - - - Cytochrome_cB HKD3_k127_86437_4 1047013.AQSP01000118_gene1233 1.228e-17 93.0 COG2304@1|root,COG2304@2|Bacteria 2|Bacteria IU oxidoreductase activity - - - ko:K12511 - - - - ko00000,ko02044 - - - FHA,VWA,VWA_2 HKD3_k127_8649747_1 762984.HMPREF9445_02412 5.735e-13 79.0 28HHD@1|root,2Z7T3@2|Bacteria,4NGWB@976|Bacteroidetes,2FQ08@200643|Bacteroidia,4AKI9@815|Bacteroidaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - DUF3810 HKD3_k127_8649747_0 290397.Adeh_0476 4.363e-99 330.0 COG0068@1|root,COG0068@2|Bacteria,1MVP8@1224|Proteobacteria,42M3G@68525|delta/epsilon subdivisions,2WJ51@28221|Deltaproteobacteria,2YTV0@29|Myxococcales 28221|Deltaproteobacteria O Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide hypF - - ko:K04656 - - - - ko00000 - - - Acylphosphatase,Sua5_yciO_yrdC,zf-HYPF HKD3_k127_8657128_12 379066.GAU_3550 6.149e-09 61.0 COG0591@1|root,COG0591@2|Bacteria 2|Bacteria E symporter activity - - - ko:K03307 - - - - ko00000 2.A.21 - - SSF HKD3_k127_8657128_8 485913.Krac_9229 3.057e-44 172.0 COG2945@1|root,COG2945@2|Bacteria,2G9MQ@200795|Chloroflexi 200795|Chloroflexi S hydrolase of the alpha beta - - - ko:K07018 - - - - ko00000 - - - Hydrolase_4 HKD3_k127_8657128_9 926549.KI421517_gene2560 2.342e-31 132.0 COG3358@1|root,COG3358@2|Bacteria,4NNWJ@976|Bacteroidetes,47Q5N@768503|Cytophagia 976|Bacteroidetes S Protein of unknown function (DUF1684) - - - ko:K09164 - - - - ko00000 - - - DUF1684 HKD3_k127_8657128_0 234267.Acid_0759 2.25e-260 834.0 COG1506@1|root,COG1506@2|Bacteria 2|Bacteria E serine-type peptidase activity - - - - - - - - - - - - DUF2920,Peptidase_S9 HKD3_k127_8657128_1 986075.CathTA2_1937 2.71e-165 532.0 COG0624@1|root,COG0624@2|Bacteria,1TP2D@1239|Firmicutes,4HB9G@91061|Bacilli 91061|Bacilli E COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases dapE - - - - - - - - - - - M20_dimer,Peptidase_M20 HKD3_k127_8657128_2 1267535.KB906767_gene1877 3.629e-157 513.0 COG3604@1|root,COG3604@2|Bacteria,3Y9A3@57723|Acidobacteria 57723|Acidobacteria KT Sigma-54 interaction domain - - - - - - - - - - - - HTH_8,Sigma54_activat HKD3_k127_8657128_5 385682.AFSL01000023_gene2176 2.246e-64 242.0 COG1538@1|root,COG1538@2|Bacteria,4NG42@976|Bacteroidetes,2FMZB@200643|Bacteroidia,3XJ3I@558415|Marinilabiliaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP HKD3_k127_8657128_3 1168034.FH5T_04605 9.218e-75 282.0 COG1566@1|root,COG1566@2|Bacteria,4PKGF@976|Bacteroidetes,2G3GB@200643|Bacteroidia 976|Bacteroidetes V Auxiliary transport protein, membrane fusion protein (MFP) family protein farA - - ko:K01993 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 HKD3_k127_8657128_7 385682.AFSL01000023_gene2174 7.583e-59 219.0 COG1511@1|root,COG1511@2|Bacteria,4PMJF@976|Bacteroidetes,2G0DE@200643|Bacteroidia,3XKAE@558415|Marinilabiliaceae 976|Bacteroidetes S ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 HKD3_k127_8657128_4 864069.MicloDRAFT_00014040 3.053e-67 256.0 COG0842@1|root,COG1566@1|root,COG0842@2|Bacteria,COG1566@2|Bacteria,1R4QG@1224|Proteobacteria,2TRYM@28211|Alphaproteobacteria 28211|Alphaproteobacteria V COG0842 ABC-type multidrug transport system, permease component - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 HKD3_k127_8657128_11 637389.Acaty_c1602 5.729e-11 75.0 COG1309@1|root,COG1309@2|Bacteria,1Q9E2@1224|Proteobacteria,1TD5N@1236|Gammaproteobacteria,2NCC3@225057|Acidithiobacillales 225057|Acidithiobacillales K Bacterial regulatory proteins, tetR family - - - ko:K09017 - - - - ko00000,ko03000 - - - TetR_N HKD3_k127_8657128_10 1278304.JAFR01000007_gene258 4.286e-20 101.0 COG2021@1|root,COG2021@2|Bacteria 2|Bacteria E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine - - - ko:K16264 - - - - ko00000,ko02000 2.A.4.1 - - Abhydrolase_1,Abhydrolase_6 HKD3_k127_8657128_6 234267.Acid_6581 1.348e-63 220.0 COG0183@1|root,COG0183@2|Bacteria,3Y7RP@57723|Acidobacteria 57723|Acidobacteria I Thiolase, C-terminal domain - - - - - - - - - - - - Thiolase_C,Thiolase_N HKD3_k127_8693694_0 682795.AciX8_3026 6.625e-261 823.0 COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria 2|Bacteria M serine-type peptidase activity tri1 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - ko:K08676 - - - - ko00000,ko01000,ko01002 - - - PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ HKD3_k127_8711481_0 1121920.AUAU01000002_gene2135 2.44e-152 490.0 COG1355@1|root,COG1355@2|Bacteria 2|Bacteria C regulation of microtubule-based process - - - ko:K06990 - - - - ko00000,ko04812 - - - Memo HKD3_k127_8711481_1 404380.Gbem_2303 6.349e-45 165.0 COG0412@1|root,COG0412@2|Bacteria,1NKIB@1224|Proteobacteria,42RZH@68525|delta/epsilon subdivisions,2WNXN@28221|Deltaproteobacteria 28221|Deltaproteobacteria Q Dienelactone hydrolase family - - - - - - - - - - - - DLH HKD3_k127_8731568_0 378806.STAUR_3958 3.803e-140 463.0 COG2866@1|root,COG2866@2|Bacteria,1R6VU@1224|Proteobacteria,438RX@68525|delta/epsilon subdivisions,2X3YQ@28221|Deltaproteobacteria,2YXMI@29|Myxococcales 28221|Deltaproteobacteria E Zinc carboxypeptidase - - - - - - - - - - - - Peptidase_M14 HKD3_k127_8731568_1 1121017.AUFG01000032_gene408 4.069e-92 319.0 COG0174@1|root,COG0174@2|Bacteria,2GMN1@201174|Actinobacteria,4FEXR@85021|Intrasporangiaceae 201174|Actinobacteria E glutamine synthetase - - 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 - R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 - - - Gln-synt_C,Gln-synt_N HKD3_k127_8731568_2 234267.Acid_2148 9.329e-82 295.0 COG0612@1|root,COG0612@2|Bacteria,3Y77X@57723|Acidobacteria 57723|Acidobacteria S Insulinase (Peptidase family M16) - - - - - - - - - - - - Peptidase_M16,Peptidase_M16_C HKD3_k127_8749666_2 335543.Sfum_1996 1.978e-84 299.0 COG1355@1|root,COG2078@1|root,COG1355@2|Bacteria,COG2078@2|Bacteria,1MXK5@1224|Proteobacteria,42R55@68525|delta/epsilon subdivisions,2WN4E@28221|Deltaproteobacteria,2MQCK@213462|Syntrophobacterales 28221|Deltaproteobacteria S Memo-like protein - - - ko:K06990 - - - - ko00000,ko04812 - - - Memo HKD3_k127_8749666_1 237368.SCABRO_03950 7.707e-101 342.0 COG1180@1|root,COG1180@2|Bacteria,2IYWA@203682|Planctomycetes 203682|Planctomycetes C Radical SAM superfamily - - - - - - - - - - - - Fer4_12,Radical_SAM HKD3_k127_8749666_0 335543.Sfum_2670 5.304e-140 458.0 COG0626@1|root,COG0626@2|Bacteria,1MU57@1224|Proteobacteria,42M67@68525|delta/epsilon subdivisions,2WJQX@28221|Deltaproteobacteria,2MQ8M@213462|Syntrophobacterales 28221|Deltaproteobacteria E PFAM Cys Met metabolism - - 4.4.1.11,4.4.1.8 ko:K01760,ko:K01761 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 M00017 R00654,R00782,R01286,R02408,R04770,R04941 RC00056,RC00069,RC00196,RC00348,RC00382,RC00488,RC00710,RC01209,RC01210,RC01245,RC02303 ko00000,ko00001,ko00002,ko01000 - - - Cys_Met_Meta_PP HKD3_k127_8749666_3 1267535.KB906767_gene3031 3.769e-16 83.0 2B11W@1|root,31TFA@2|Bacteria,3Y4Z8@57723|Acidobacteria,2JJT4@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - HKD3_k127_8755041_1 379066.GAU_3714 4.387e-51 184.0 COG2866@1|root,COG2866@2|Bacteria,1ZT9V@142182|Gemmatimonadetes 2|Bacteria E Zn_pept - - - - - - - - - - - - Peptidase_M14 HKD3_k127_8755041_0 402777.KB235904_gene2694 5.617e-54 213.0 COG1807@1|root,COG1807@2|Bacteria,1GI8H@1117|Cyanobacteria,1HETH@1150|Oscillatoriales 1117|Cyanobacteria M Dolichyl-phosphate-mannose-protein mannosyltransferase - - - - - - - - - - - - PMT_2 HKD3_k127_8755758_4 234267.Acid_4919 7.749e-44 160.0 COG1413@1|root,COG1413@2|Bacteria 2|Bacteria C deoxyhypusine monooxygenase activity - - - - - - - - - - - - DUF1080,HEAT_2,HEAT_PBS HKD3_k127_8755758_8 864702.OsccyDRAFT_3187 0.0001653 55.0 COG1835@1|root,COG1835@2|Bacteria,1G3VY@1117|Cyanobacteria,1HAJE@1150|Oscillatoriales 1117|Cyanobacteria I Acyltransferase family - - - - - - - - - - - - Acyl_transf_3 HKD3_k127_8755758_2 1337936.IJ00_01670 8.168e-118 403.0 COG1680@1|root,COG1680@2|Bacteria,1G5Z2@1117|Cyanobacteria,1HIVF@1161|Nostocales 1117|Cyanobacteria V Beta-lactamase - - - - - - - - - - - - Beta-lactamase HKD3_k127_8755758_7 1565129.JSFF01000002_gene3572 4.157e-05 53.0 COG3637@1|root,COG3637@2|Bacteria,1RICQ@1224|Proteobacteria,1SF8S@1236|Gammaproteobacteria,2QBM3@267890|Shewanellaceae 1236|Gammaproteobacteria M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl HKD3_k127_8755758_5 1210884.HG799464_gene10603 2.293e-12 80.0 2A5PP@1|root,30UEI@2|Bacteria,2J4IH@203682|Planctomycetes 1210884.HG799464_gene10603|- - - - - - - - - - - - - - - - HKD3_k127_8755758_6 1283299.AUKG01000002_gene4967 3.565e-12 74.0 COG1595@1|root,COG1595@2|Bacteria,2IDUR@201174|Actinobacteria,4CQGF@84995|Rubrobacteria 84995|Rubrobacteria K Sigma-70, region 4 - - - - - - - - - - - - Sigma70_r2,Sigma70_r4_2 HKD3_k127_8755758_1 1121439.dsat_1081 6.167e-128 443.0 COG0168@1|root,COG0168@2|Bacteria,1MUIJ@1224|Proteobacteria,42MPV@68525|delta/epsilon subdivisions,2WJBH@28221|Deltaproteobacteria,2M8CP@213115|Desulfovibrionales 28221|Deltaproteobacteria P Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA trkH - - ko:K03498 - - - - ko00000,ko02000 2.A.38.1,2.A.38.4 - - TrkH HKD3_k127_8755758_3 207559.Dde_2030 4.752e-90 317.0 COG0569@1|root,COG0569@2|Bacteria,1MW8R@1224|Proteobacteria,42NWZ@68525|delta/epsilon subdivisions,2WJU7@28221|Deltaproteobacteria,2M895@213115|Desulfovibrionales 28221|Deltaproteobacteria P TrkA-N domain protein trkA - - ko:K03499 - - - - ko00000,ko02000 2.A.38.1,2.A.38.4 - - TrkA_C,TrkA_N HKD3_k127_8755758_0 335543.Sfum_1470 0.0 1133.0 COG0058@1|root,COG0058@2|Bacteria,1MW4J@1224|Proteobacteria,42N22@68525|delta/epsilon subdivisions,2WIMH@28221|Deltaproteobacteria,2MQBA@213462|Syntrophobacterales 28221|Deltaproteobacteria G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties glgP - 2.4.1.1 ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 - R02111 - ko00000,ko00001,ko01000 - GT35 - Phosphorylase HKD3_k127_8762394_2 1254432.SCE1572_04435 5.495e-192 625.0 COG1266@1|root,COG1668@1|root,COG1266@2|Bacteria,COG1668@2|Bacteria,1R3RG@1224|Proteobacteria,43B64@68525|delta/epsilon subdivisions,2X6JN@28221|Deltaproteobacteria,2YVQ4@29|Myxococcales 28221|Deltaproteobacteria CP sodium ABC transporter, permease - - - ko:K09696 ko02010,ko02020,map02010,map02020 M00253 - - ko00000,ko00001,ko00002,ko02000 3.A.1.115 - - ABC2_membrane_2,Abi HKD3_k127_8762394_3 1519464.HY22_00050 1.721e-114 377.0 COG0604@1|root,COG0604@2|Bacteria 2|Bacteria C NADPH:quinone reductase activity - - - - - - - - - - - - ADH_N,ADH_zinc_N HKD3_k127_8762394_6 1499967.BAYZ01000027_gene1815 1.315e-91 314.0 COG0407@1|root,COG0407@2|Bacteria 2|Bacteria H Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III - - 4.1.1.37 ko:K01599 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R03197,R04972 RC00872 ko00000,ko00001,ko00002,ko01000 - - - URO-D HKD3_k127_8762394_5 1379698.RBG1_1C00001G0813 1.261e-102 345.0 COG0667@1|root,COG0667@2|Bacteria 2|Bacteria C Aldo Keto reductase - - - ko:K07079 - - - - ko00000 - - - Aldo_ket_red HKD3_k127_8762394_0 234267.Acid_0094 3.833e-298 939.0 COG1960@1|root,COG1960@2|Bacteria 2|Bacteria I acyl-CoA dehydrogenase activity fadE23 - 1.3.8.7 ko:K00249 ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320 M00013,M00036,M00087 R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754 RC00052,RC00068,RC00076,RC00095,RC00148,RC00246 ko00000,ko00001,ko00002,ko01000 - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N HKD3_k127_8762394_4 1304874.JAFY01000002_gene575 7.861e-103 349.0 COG1748@1|root,COG1748@2|Bacteria 2|Bacteria E saccharopine dehydrogenase activity lysDH - 1.4.1.18 ko:K19064 ko00960,ko01100,ko01110,map00960,map01100,map01110 - R00446,R02317 RC00062,RC00694 ko00000,ko00001,ko01000 - - - ELFV_dehydrog,Sacchrp_dh_C,Sacchrp_dh_NADP HKD3_k127_8762394_7 1254432.SCE1572_07365 6.373e-79 271.0 COG2818@1|root,COG2818@2|Bacteria,1R9X5@1224|Proteobacteria,42QWV@68525|delta/epsilon subdivisions,2WMPT@28221|Deltaproteobacteria,2Z0H3@29|Myxococcales 28221|Deltaproteobacteria L Methyladenine glycosylase tag - 3.2.2.20 ko:K01246 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Adenine_glyco HKD3_k127_8762394_10 886293.Sinac_2556 5.821e-32 127.0 COG0526@1|root,COG1331@1|root,COG0526@2|Bacteria,COG1331@2|Bacteria,2J28Y@203682|Planctomycetes 203682|Planctomycetes CO Peptidase M56 - - - - - - - - - - - - CarboxypepD_reg HKD3_k127_8762394_13 864051.BurJ1DRAFT_3468 2.27e-11 73.0 COG0526@1|root,COG0526@2|Bacteria,1RHMS@1224|Proteobacteria,2VUYK@28216|Betaproteobacteria,1KMFJ@119065|unclassified Burkholderiales 28216|Betaproteobacteria CO Thioredoxin-like - - 5.3.4.1 ko:K01829 - - - - ko00000,ko01000 - - - Thioredoxin_7 HKD3_k127_8762394_11 251221.35213547 8.234e-32 133.0 COG3682@1|root,COG3682@2|Bacteria 2|Bacteria K negative regulation of transcription, DNA-templated - - - - - - - - - - - - Penicillinase_R HKD3_k127_8762394_12 1183438.GKIL_1583 8.27e-22 111.0 COG1413@1|root,COG4219@1|root,COG1413@2|Bacteria,COG4219@2|Bacteria 2|Bacteria C deoxyhypusine monooxygenase activity - - - - - - - - - - - - HEAT_2,PT-HINT,Peptidase_M56,Sulfatase HKD3_k127_8762394_1 1267535.KB906767_gene656 2.681e-218 701.0 COG1032@1|root,COG1032@2|Bacteria,3Y2FN@57723|Acidobacteria,2JI6W@204432|Acidobacteriia 204432|Acidobacteriia C PFAM Radical SAM - - - - - - - - - - - - Radical_SAM HKD3_k127_8762394_8 1114959.SZMC14600_16301 7.994e-66 246.0 COG3023@1|root,COG3023@2|Bacteria,2HVMQ@201174|Actinobacteria 201174|Actinobacteria V N-Acetylmuramoyl-L-alanine amidase - - - - - - - - - - - - - HKD3_k127_8762394_9 1499967.BAYZ01000148_gene1758 4.766e-37 149.0 28JNG@1|root,2Z9ES@2|Bacteria,2NPDF@2323|unclassified Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_8766643_13 234267.Acid_0817 4.936e-35 143.0 COG1579@1|root,COG1579@2|Bacteria,3Y509@57723|Acidobacteria 57723|Acidobacteria S C4-type zinc ribbon domain - - - ko:K07164 - - - - ko00000 - - - zf-RING_7 HKD3_k127_8766643_10 103733.JNYO01000012_gene2606 2.2e-37 147.0 COG0328@1|root,COG0406@1|root,COG0328@2|Bacteria,COG0406@2|Bacteria,2GJ9R@201174|Actinobacteria,4E04U@85010|Pseudonocardiales 201174|Actinobacteria GL phosphoglycerate mutase rnhA GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005488,GO:0006139,GO:0006401,GO:0006725,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016891,GO:0016893,GO:0017144,GO:0018130,GO:0019438,GO:0019439,GO:0032296,GO:0033013,GO:0033014,GO:0034641,GO:0034655,GO:0042364,GO:0042578,GO:0043170,GO:0043755,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046700,GO:0051186,GO:0051188,GO:0071667,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 3.1.26.4,3.1.3.73 ko:K02226,ko:K22316 ko00860,ko01100,ko03030,map00860,map01100,map03030 M00122 R04594,R11173 RC00017 ko00000,ko00001,ko00002,ko01000,ko03032 - - - His_Phos_1,RVT_3 HKD3_k127_8766643_6 1214101.BN159_1825 9.596e-102 346.0 COG0665@1|root,COG0665@2|Bacteria,2GNAE@201174|Actinobacteria 201174|Actinobacteria E PFAM FAD dependent oxidoreductase - - 1.5.3.1 ko:K00303 ko00260,ko01100,map00260,map01100 - R00610 RC00060,RC00557 ko00000,ko00001,ko01000 - - - DAO HKD3_k127_8766643_4 797209.ZOD2009_13017 6.912e-126 424.0 COG0076@1|root,arCOG00027@2157|Archaea,2Y37G@28890|Euryarchaeota,23ZDQ@183963|Halobacteria 183963|Halobacteria E COG0076 Glutamate decarboxylase and related PLP-dependent proteins - - - - - - - - - - - - Pyridoxal_deC HKD3_k127_8766643_3 1382359.JIAL01000001_gene1024 1.041e-182 601.0 COG1505@1|root,COG1505@2|Bacteria,3Y2UH@57723|Acidobacteria,2JI70@204432|Acidobacteriia 204432|Acidobacteriia E Prolyl oligopeptidase - - 3.4.21.26 ko:K01322 ko04614,map04614 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S9,Peptidase_S9_N HKD3_k127_8766643_7 1279038.KB907348_gene3100 4.687e-62 230.0 COG0790@1|root,COG0790@2|Bacteria,1MWPA@1224|Proteobacteria,2TR2B@28211|Alphaproteobacteria,2JQWU@204441|Rhodospirillales 204441|Rhodospirillales O COG0790 FOG TPR repeat, SEL1 subfamily - - - ko:K07126 - - - - ko00000 - - - Sel1 HKD3_k127_8766643_22 1266925.JHVX01000001_gene2543 3.137e-05 55.0 291G3@1|root,2ZP2V@2|Bacteria,1P6N6@1224|Proteobacteria,2W5IT@28216|Betaproteobacteria,374CY@32003|Nitrosomonadales 28216|Betaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_8766643_0 1267533.KB906735_gene5020 2.626e-209 677.0 COG0457@1|root,COG0515@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,3Y67Y@57723|Acidobacteria 57723|Acidobacteria KLT Protein tyrosine kinase - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase,TPR_12,TPR_8 HKD3_k127_8766643_12 204669.Acid345_4392 2.045e-35 147.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,3Y333@57723|Acidobacteria 57723|Acidobacteria KLTU Involved in the tonB-independent uptake of proteins - - - - - - - - - - - - PD40,Pkinase HKD3_k127_8766643_21 204669.Acid345_4392 4.417e-07 62.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,3Y333@57723|Acidobacteria 57723|Acidobacteria KLTU Involved in the tonB-independent uptake of proteins - - - - - - - - - - - - PD40,Pkinase HKD3_k127_8766643_8 488538.SAR116_1277 7.933e-53 199.0 COG3741@1|root,COG3741@2|Bacteria,1N949@1224|Proteobacteria,2US2U@28211|Alphaproteobacteria 28211|Alphaproteobacteria E N-formylglutamate amidohydrolase - - - - - - - - - - - - FGase HKD3_k127_8766643_16 1121920.AUAU01000005_gene960 2.615e-23 108.0 28T9S@1|root,2ZFID@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_8766643_18 1304874.JAFY01000007_gene2252 5.156e-18 98.0 COG4783@1|root,COG4783@2|Bacteria,3TA2J@508458|Synergistetes 508458|Synergistetes S Peptidase family M48 - - - - - - - - - - - - Peptidase_M48 HKD3_k127_8766643_9 1265505.ATUG01000002_gene2495 2.017e-46 177.0 COG2020@1|root,COG2020@2|Bacteria,1MWU6@1224|Proteobacteria,42X7G@68525|delta/epsilon subdivisions,2WSX9@28221|Deltaproteobacteria,2MM84@213118|Desulfobacterales 28221|Deltaproteobacteria O methyltransferase activity - - - - - - - - - - - - NnrU,PEMT HKD3_k127_8766643_15 1379270.AUXF01000001_gene1926 1.055e-23 104.0 COG1529@1|root,COG1529@2|Bacteria,1ZUQ4@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - 1.3.99.16 ko:K07303 - - - - ko00000,ko01000 - - - Ald_Xan_dh_C2 HKD3_k127_8766643_23 1408473.JHXO01000002_gene3989 3.625e-05 55.0 COG2020@1|root,COG2020@2|Bacteria,4NXS4@976|Bacteroidetes 976|Bacteroidetes O Methyltransferase - - - - - - - - - - - - ICMT,PEMT HKD3_k127_8766643_19 1121013.P873_09745 4.8e-15 78.0 2ATJ5@1|root,31J35@2|Bacteria,1QGTA@1224|Proteobacteria,1TE8Y@1236|Gammaproteobacteria,1X946@135614|Xanthomonadales 135614|Xanthomonadales - - - - - - - - - - - - - - - HKD3_k127_8766643_1 1210884.HG799463_gene10120 1.532e-204 647.0 COG2706@1|root,COG2706@2|Bacteria,2IY02@203682|Planctomycetes 203682|Planctomycetes G COG2706 3-carboxymuconate cyclase - - 3.1.1.31 ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 M00004,M00006,M00008 R02035 RC00537 ko00000,ko00001,ko00002,ko01000 - - - Lactonase HKD3_k127_8766643_17 1125863.JAFN01000001_gene2333 6.665e-23 100.0 COG2161@1|root,COG2161@2|Bacteria,1R2Q0@1224|Proteobacteria 1224|Proteobacteria D Antitoxin Phd_YefM, type II toxin-antitoxin system - - - - - - - - - - - - PhdYeFM_antitox HKD3_k127_8766643_11 1125863.JAFN01000001_gene2334 7.164e-36 142.0 COG3744@1|root,COG3744@2|Bacteria,1RJ4K@1224|Proteobacteria,42WUI@68525|delta/epsilon subdivisions,2WT5M@28221|Deltaproteobacteria 28221|Deltaproteobacteria S PIN domain - - - - - - - - - - - - PIN HKD3_k127_8766643_20 1382304.JNIL01000001_gene874 3.397e-11 74.0 COG1434@1|root,COG1434@2|Bacteria,1VA42@1239|Firmicutes,4HP7F@91061|Bacilli,279XP@186823|Alicyclobacillaceae 91061|Bacilli S DUF218 domain - - - - - - - - - - - - DUF218 HKD3_k127_8766643_14 1265505.ATUG01000002_gene2495 9.844e-29 122.0 COG2020@1|root,COG2020@2|Bacteria,1MWU6@1224|Proteobacteria,42X7G@68525|delta/epsilon subdivisions,2WSX9@28221|Deltaproteobacteria,2MM84@213118|Desulfobacterales 28221|Deltaproteobacteria O methyltransferase activity - - - - - - - - - - - - NnrU,PEMT HKD3_k127_8766643_2 1267534.KB906759_gene1961 9.657e-191 604.0 COG4948@1|root,COG4948@2|Bacteria,3Y46A@57723|Acidobacteria,2JNZS@204432|Acidobacteriia 204432|Acidobacteriia M Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - - - - - - - - - - MR_MLE_C HKD3_k127_8766643_5 234267.Acid_0873 5.722e-105 366.0 COG0457@1|root,COG0515@1|root,COG5616@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,COG5616@2|Bacteria,3Y6VR@57723|Acidobacteria 57723|Acidobacteria KLT Protein tyrosine kinase - - 2.7.11.1 ko:K08282,ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase HKD3_k127_8801553_0 580332.Slit_0499 1.564e-205 665.0 COG1450@1|root,COG1450@2|Bacteria,1MUUA@1224|Proteobacteria,2VI7X@28216|Betaproteobacteria 28216|Betaproteobacteria NU general secretion pathway protein D gspD - - ko:K02453 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - Secretin,Secretin_N HKD3_k127_8801553_1 1123261.AXDW01000005_gene2550 7.237e-52 190.0 COG1595@1|root,COG1595@2|Bacteria,1RD9G@1224|Proteobacteria,1S82R@1236|Gammaproteobacteria,1X7PT@135614|Xanthomonadales 135614|Xanthomonadales K Sigma-70 region 2 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 HKD3_k127_8801553_4 420662.Mpe_A1758 2.516e-28 123.0 COG0810@1|root,COG0810@2|Bacteria,1RG9G@1224|Proteobacteria,2WEFK@28216|Betaproteobacteria,1KMCV@119065|unclassified Burkholderiales 28216|Betaproteobacteria M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - ko:K03832 - - - - ko00000,ko02000 2.C.1.1 - - - HKD3_k127_8801553_2 338969.Rfer_1118 1.547e-49 180.0 COG0848@1|root,COG0848@2|Bacteria,1RHDF@1224|Proteobacteria,2VT16@28216|Betaproteobacteria,4AI0X@80864|Comamonadaceae 28216|Betaproteobacteria U Biopolymer transport protein ExbD/TolR exbD2 - - ko:K03559 - - - - ko00000,ko02000 1.A.30.2.1 - - ExbD HKD3_k127_8801553_3 338969.Rfer_1119 6.727e-49 177.0 COG0848@1|root,COG0848@2|Bacteria,1MZ6M@1224|Proteobacteria,2VSVW@28216|Betaproteobacteria,4ADW4@80864|Comamonadaceae 28216|Betaproteobacteria U PFAM Biopolymer transport protein ExbD TolR exbD1 - - ko:K03559 - - - - ko00000,ko02000 1.A.30.2.1 - - ExbD HKD3_k127_8812111_1 903818.KI912268_gene2429 1.809e-89 299.0 COG0231@1|root,COG0231@2|Bacteria,3Y2GH@57723|Acidobacteria 57723|Acidobacteria J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase - - - ko:K02356 - - - - ko00000,ko03012 - - - EFP,EFP_N,Elong-fact-P_C HKD3_k127_8812111_0 886293.Sinac_3668 5.062e-101 341.0 COG0534@1|root,COG0534@2|Bacteria,2IX5Q@203682|Planctomycetes 203682|Planctomycetes V COG0534 Na -driven multidrug efflux pump - - - ko:K03327 - - - - ko00000,ko02000 2.A.66.1 - - MatE HKD3_k127_8847599_0 1123248.KB893381_gene944 2.61e-300 932.0 COG1874@1|root,COG1874@2|Bacteria,4PPRG@976|Bacteroidetes 976|Bacteroidetes G Hypothetical glycosyl hydrolase 6 - - - - - - - - - - - - GHL6 HKD3_k127_8848173_0 861299.J421_6085 1.311e-169 539.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,1ZSND@142182|Gemmatimonadetes 142182|Gemmatimonadetes EU Dienelactone hydrolase family - - - - - - - - - - - - PD40,Peptidase_S9 HKD3_k127_8848173_2 760568.Desku_2837 6.423e-30 131.0 COG3437@1|root,COG3437@2|Bacteria,1TQ0S@1239|Firmicutes,24800@186801|Clostridia,260BC@186807|Peptococcaceae 186801|Clostridia T TIGRFAM Diguanylate cyclase - - - - - - - - - - - - GGDEF,HD,HD_5 HKD3_k127_8848173_1 652103.Rpdx1_0901 8.46e-31 122.0 COG0662@1|root,COG0662@2|Bacteria,1NG5P@1224|Proteobacteria,2UMGS@28211|Alphaproteobacteria,3K68C@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria G Cupin domain - - - - - - - - - - - - Cupin_2 HKD3_k127_8867207_3 448385.sce1649 4.894e-32 130.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2WIT0@28221|Deltaproteobacteria,2YX5F@29|Myxococcales 28221|Deltaproteobacteria T response regulator nla19 - - ko:K07713 ko02020,map02020 M00499 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat HKD3_k127_8867207_2 1125863.JAFN01000001_gene2827 1.081e-63 233.0 COG3852@1|root,COG3852@2|Bacteria,1NTTH@1224|Proteobacteria,42MC9@68525|delta/epsilon subdivisions,2WIYS@28221|Deltaproteobacteria 28221|Deltaproteobacteria T PFAM ATP-binding region, ATPase domain protein gnfL - 2.7.13.3 ko:K02668,ko:K07708,ko:K07709 ko02020,map02020 M00497,M00499,M00501 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035 - - - HATPase_c,HisKA,PAS,PAS_4,PAS_8 HKD3_k127_8867207_0 1047013.AQSP01000131_gene1823 3.269e-155 498.0 COG3608@1|root,COG3608@2|Bacteria,2NQNJ@2323|unclassified Bacteria 2|Bacteria S succinylglutamate desuccinylase aspartoacylase pgp1 - - ko:K06987,ko:K07402 - - - - ko00000 - - - AstE_AspA,Peptidase_M99,Peptidase_M99_C,Peptidase_M99_m HKD3_k127_8867207_4 457415.HMPREF1006_01318 7.298e-06 50.0 2EQNC@1|root,33I8A@2|Bacteria,3TBT0@508458|Synergistetes 508458|Synergistetes - - - - - - - - - - - - - - - HKD3_k127_8867207_1 1047013.AQSP01000131_gene1822 9.453e-73 250.0 COG4666@1|root,COG4666@2|Bacteria,2NQNY@2323|unclassified Bacteria 2|Bacteria S Tripartite ATP-independent periplasmic transporter, DctM component - - - - - - - - - - - - - HKD3_k127_8887800_8 1396141.BATP01000022_gene294 1.033e-60 211.0 COG0673@1|root,COG0673@2|Bacteria,46U7B@74201|Verrucomicrobia,2IV4V@203494|Verrucomicrobiae 203494|Verrucomicrobiae S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA HKD3_k127_8887800_0 1122138.AQUZ01000014_gene6984 7.866e-292 924.0 COG4354@1|root,COG4354@2|Bacteria,2I9UI@201174|Actinobacteria,4DTFP@85009|Propionibacteriales 201174|Actinobacteria G beta-glucosidase 2, glycosyl-hydrolase family 116 N-term - - - - - - - - - - - - DUF608,Glyco_hydr_116N HKD3_k127_8887800_9 1120949.KB903294_gene4175 5.269e-60 216.0 COG4976@1|root,COG4976@2|Bacteria,2IRMM@201174|Actinobacteria,4DFHM@85008|Micromonosporales 201174|Actinobacteria S ubiE/COQ5 methyltransferase family - - - - - - - - - - - - Methyltransf_11 HKD3_k127_8887800_10 1121920.AUAU01000006_gene301 6.061e-50 184.0 2BYAB@1|root,32R2Z@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HKD3_k127_8887800_7 1448139.AI20_14475 1.756e-63 229.0 COG0775@1|root,COG0775@2|Bacteria,1NQYT@1224|Proteobacteria,1S1NE@1236|Gammaproteobacteria 1236|Gammaproteobacteria F Phosphorylase superfamily - - 3.2.2.9 ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 M00034,M00609 R00194,R01401 RC00063,RC00318 ko00000,ko00001,ko00002,ko01000 - - - PNP_UDP_1 HKD3_k127_8887800_5 234267.Acid_4729 4.57e-68 246.0 COG0457@1|root,COG0457@2|Bacteria,3Y7Q5@57723|Acidobacteria 57723|Acidobacteria S Tetratricopeptide repeat - - - - - - - - - - - - TPR_8 HKD3_k127_8887800_14 269800.Tfu_2403 3.604e-11 76.0 COG2234@1|root,COG2234@2|Bacteria,2IDP0@201174|Actinobacteria,4EFH8@85012|Streptosporangiales 201174|Actinobacteria S PA domain - - - - - - - - - - - - PA,Peptidase_M28 HKD3_k127_8887800_3 452637.Oter_3515 1.506e-77 287.0 COG4745@1|root,COG4745@2|Bacteria,46T45@74201|Verrucomicrobia,3K9I6@414999|Opitutae 414999|Opitutae M Dolichyl-phosphate-mannose-protein mannosyltransferase - - - - - - - - - - - - PMT_2 HKD3_k127_8887800_4 452637.Oter_3514 9.989e-72 256.0 2F286@1|root,33V6C@2|Bacteria,46V8R@74201|Verrucomicrobia,3K9H5@414999|Opitutae 414999|Opitutae - - - - - - - - - - - - - - - HKD3_k127_8887800_15 1340493.JNIF01000003_gene1556 3.258e-06 60.0 COG1413@1|root,COG1413@2|Bacteria 2|Bacteria C deoxyhypusine monooxygenase activity cpeZ - - ko:K05384,ko:K05386 ko00196,ko01100,map00196,map01100 - - - ko00000,ko00001,ko00194 - - - HEAT,HEAT_2 HKD3_k127_8887800_1 1396418.BATQ01000067_gene1748 4.121e-142 466.0 COG0673@1|root,COG0673@2|Bacteria 2|Bacteria S inositol 2-dehydrogenase activity - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C HKD3_k127_8887800_2 1123278.KB893566_gene2189 1.29e-114 379.0 COG1619@1|root,COG1619@2|Bacteria,4NF5Q@976|Bacteroidetes,47KS4@768503|Cytophagia 976|Bacteroidetes V peptidase U61 LD-carboxypeptidase A ldcA - 3.4.17.13 ko:K01297 - - - - ko00000,ko01000,ko01002,ko01011 - - - Peptidase_S66 HKD3_k127_8887800_6 506534.Rhein_3893 1.219e-66 243.0 COG1082@1|root,COG1082@2|Bacteria,1QEV8@1224|Proteobacteria,1RZ1S@1236|Gammaproteobacteria 1236|Gammaproteobacteria G COG1082 Sugar phosphate isomerases epimerases - - - - - - - - - - - - AP_endonuc_2 HKD3_k127_8887800_11 234267.Acid_3429 5.344e-39 149.0 COG1652@1|root,COG1652@2|Bacteria,3Y84E@57723|Acidobacteria 57723|Acidobacteria S Lysin motif - - - - - - - - - - - - LysM HKD3_k127_8887800_12 29581.BW37_01941 1.97e-25 114.0 COG3753@1|root,COG3753@2|Bacteria,1N7FF@1224|Proteobacteria,2VVTK@28216|Betaproteobacteria,4753V@75682|Oxalobacteraceae 28216|Betaproteobacteria S Bacterial protein of unknown function (DUF937) - - - - - - - - - - - - DUF937 HKD3_k127_8887800_13 697281.Mahau_0731 6.168e-18 83.0 COG1082@1|root,COG1082@2|Bacteria,1TPJT@1239|Firmicutes,24A6G@186801|Clostridia,42FZ0@68295|Thermoanaerobacterales 186801|Clostridia G protein TIM barrel - - - - - - - - - - - - AP_endonuc_2,AP_endonuc_2_N HKD3_k127_8900981_6 234267.Acid_3938 1.077e-23 110.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria 2|Bacteria U Involved in the tonB-independent uptake of proteins - - 2.7.11.1 ko:K08884,ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PD40,Pkinase,WD40 HKD3_k127_8900981_1 290397.Adeh_0431 3.896e-104 344.0 COG0708@1|root,COG0708@2|Bacteria,1MVII@1224|Proteobacteria,42NY7@68525|delta/epsilon subdivisions,2WIXK@28221|Deltaproteobacteria,2Z364@29|Myxococcales 28221|Deltaproteobacteria L Endonuclease/Exonuclease/phosphatase family - - 3.1.11.2 ko:K01142 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Exo_endo_phos HKD3_k127_8900981_4 882.DVU_2485 3.69e-51 199.0 COG1271@1|root,COG1271@2|Bacteria,1QXQF@1224|Proteobacteria,42NKJ@68525|delta/epsilon subdivisions,2WKHM@28221|Deltaproteobacteria,2M95S@213115|Desulfovibrionales 28221|Deltaproteobacteria C oxidase subunit - - - ko:K08738 ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 3.D.4.6 - - - HKD3_k127_8900981_2 880073.Calab_2195 1.686e-102 355.0 COG1271@1|root,COG2010@1|root,COG1271@2|Bacteria,COG2010@2|Bacteria 2|Bacteria C Cytochrome c - - 1.10.3.14 ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00153 R11325 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.4.3 - - Cyt_bd_oxida_I,Cytochrome_CBB3 HKD3_k127_8900981_3 383372.Rcas_3579 1.338e-92 318.0 COG1032@1|root,COG1032@2|Bacteria,2G86N@200795|Chloroflexi,37640@32061|Chloroflexia 32061|Chloroflexia C SMART Elongator protein 3 MiaB NifB - - - - - - - - - - - - Radical_SAM HKD3_k127_8900981_5 671143.DAMO_0482 4.859e-32 134.0 COG1011@1|root,COG1011@2|Bacteria,2NQ1K@2323|unclassified Bacteria 2|Bacteria S Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - ko:K07025 - - - - ko00000 - - - HAD_2,Hydrolase,Hydrolase_like HKD3_k127_8900981_0 1449049.JONW01000012_gene215 6.564e-147 477.0 COG1228@1|root,COG1228@2|Bacteria,1MVAF@1224|Proteobacteria,2U4WG@28211|Alphaproteobacteria,2KIAY@204458|Caulobacterales 204458|Caulobacterales Q Amidohydrolase family - - - - - - - - - - - - Amidohydro_1 HKD3_k127_8900981_8 1288963.ADIS_0033 2.714e-08 63.0 COG2234@1|root,COG2234@2|Bacteria,4NENF@976|Bacteroidetes,47JMS@768503|Cytophagia 976|Bacteroidetes S Peptidase, M28 - - - - - - - - - - - - Peptidase_M28 HKD3_k127_8905152_1 1502724.FF80_03790 8.567e-08 58.0 COG4188@1|root,COG4188@2|Bacteria,1MW6H@1224|Proteobacteria,2TTRH@28211|Alphaproteobacteria 28211|Alphaproteobacteria S dienelactone hydrolase - - - - - - - - - - - - PAF-AH_p_II HKD3_k127_8905152_0 521045.Kole_0946 1.515e-51 200.0 COG1775@1|root,COG1775@2|Bacteria,2GCQE@200918|Thermotogae 200918|Thermotogae E PFAM 2-hydroxyglutaryl-CoA dehydratase D-component - - - - - - - - - - - - HGD-D HKD3_k127_8907928_2 1036674.A28LD_0671 7.278e-08 55.0 2DPEU@1|root,331SS@2|Bacteria,1NDKB@1224|Proteobacteria,1RTE7@1236|Gammaproteobacteria,2QG29@267893|Idiomarinaceae 1236|Gammaproteobacteria S Golgi phosphoprotein 3 (GPP34) - - - - - - - - - - - - GPP34 HKD3_k127_8907928_0 452637.Oter_3040 8.042e-100 336.0 COG2819@1|root,COG2819@2|Bacteria,46W78@74201|Verrucomicrobia,3K9WA@414999|Opitutae 74201|Verrucomicrobia S Putative esterase - - - ko:K07017 - - - - ko00000 - - - Esterase HKD3_k127_8907928_1 1382359.JIAL01000001_gene2102 2.245e-13 74.0 COG1629@1|root,COG1629@2|Bacteria,3Y2N1@57723|Acidobacteria,2JIIP@204432|Acidobacteriia 204432|Acidobacteriia P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg HKD3_k127_89081_3 1114856.C496_23548 2.621e-31 140.0 COG0553@1|root,arCOG00871@2157|Archaea,2XTQ1@28890|Euryarchaeota,23SWF@183963|Halobacteria 183963|Halobacteria L COG0553 Superfamily II DNA RNA helicases, SNF2 family - - - - - - - - - - - - Helicase_C,SNF2_N HKD3_k127_89081_0 1303518.CCALI_00805 6.704e-81 305.0 COG0827@1|root,COG1002@1|root,COG0827@2|Bacteria,COG1002@2|Bacteria 2|Bacteria V DNA modification - - - - - - - - - - - - Eco57I,N6_Mtase HKD3_k127_89081_2 1191523.MROS_1542 9.907e-53 190.0 COG2193@1|root,COG2193@2|Bacteria 2|Bacteria P ferroxidase activity bfr GO:0003674,GO:0003824,GO:0004322,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0016491,GO:0016722,GO:0016724,GO:0019725,GO:0030003,GO:0033212,GO:0033214,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0071944,GO:0098771 1.16.3.1 ko:K03594 ko00860,map00860 - R00078 RC02758 ko00000,ko00001,ko01000 - - - Ferritin HKD3_k127_89081_1 1210884.HG799463_gene10078 2.27e-53 207.0 COG1228@1|root,COG1228@2|Bacteria,2J1M0@203682|Planctomycetes 203682|Planctomycetes Q Amidohydrolase family - - - - - - - - - - - - Amidohydro_1 HKD3_k127_8927117_0 1347392.CCEZ01000020_gene911 2.94e-150 484.0 COG1228@1|root,COG1228@2|Bacteria,1UI33@1239|Firmicutes,25EC2@186801|Clostridia,36DJF@31979|Clostridiaceae 186801|Clostridia E Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation iadA - - ko:K01305 - - - - ko00000,ko01000,ko01002 - - - Amidohydro_1,Amidohydro_3 HKD3_k127_8927117_1 1047013.AQSP01000097_gene1947 2.942e-129 430.0 COG1288@1|root,COG1288@2|Bacteria,2NNZE@2323|unclassified Bacteria 2|Bacteria S C4-dicarboxylate anaerobic carrier arcD GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - - - - - - - - - - DcuC HKD3_k127_8933424_3 404589.Anae109_1833 8.445e-33 128.0 COG4380@1|root,COG4380@2|Bacteria,1NJYS@1224|Proteobacteria,42X1E@68525|delta/epsilon subdivisions,2WTEE@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Putative bacterial lipoprotein (DUF799) - - - - - - - - - - - - DUF799 HKD3_k127_8933424_2 243231.GSU2497 1.181e-78 275.0 2EUMZ@1|root,33N3U@2|Bacteria,1NUNW@1224|Proteobacteria,42ZFD@68525|delta/epsilon subdivisions,2WV00@28221|Deltaproteobacteria 28221|Deltaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_8933424_1 316067.Geob_3161 1.2e-97 343.0 COG0760@1|root,COG0760@2|Bacteria,1NQ2Y@1224|Proteobacteria,42XX8@68525|delta/epsilon subdivisions,2WSSQ@28221|Deltaproteobacteria 28221|Deltaproteobacteria O PPIC-type PPIASE domain - - - - - - - - - - - - Rotamase_2 HKD3_k127_8933424_0 316067.Geob_3160 6.215e-164 545.0 COG3005@1|root,COG3005@2|Bacteria,1QYGG@1224|Proteobacteria,42NFU@68525|delta/epsilon subdivisions,2WKHN@28221|Deltaproteobacteria,43UCU@69541|Desulfuromonadales 28221|Deltaproteobacteria C Doubled CXXCH motif (Paired_CXXCH_1) - - - - - - - - - - - - Paired_CXXCH_1 HKD3_k127_8940831_1 269799.Gmet_1203 9.774e-55 198.0 COG4420@1|root,COG4420@2|Bacteria,1RIDY@1224|Proteobacteria,42WI7@68525|delta/epsilon subdivisions,2WSAF@28221|Deltaproteobacteria,43VM2@69541|Desulfuromonadales 28221|Deltaproteobacteria S Protein of unknown function (DUF1003) - - - - - - - - - - - - DUF1003 HKD3_k127_8940831_0 935948.KE386495_gene1290 1.809e-174 589.0 COG0383@1|root,COG0383@2|Bacteria,1V0Q3@1239|Firmicutes,24AMV@186801|Clostridia,42I1U@68295|Thermoanaerobacterales 186801|Clostridia G Alpha mannosidase, middle domain - - - - - - - - - - - - Alpha-mann_mid,Glyco_hydro_38,Glyco_hydro_38C HKD3_k127_8982120_1 368407.Memar_2101 1.061e-06 57.0 arCOG03397@1|root,arCOG03397@2157|Archaea,2Y1K8@28890|Euryarchaeota,2NA5D@224756|Methanomicrobia 224756|Methanomicrobia S Protein of unknown function (DUF3303) - - - - - - - - - - - - DUF3303 HKD3_k127_8982120_0 215803.DB30_1425 7.931e-62 233.0 COG1404@1|root,COG1404@2|Bacteria,1MU3S@1224|Proteobacteria,42N7D@68525|delta/epsilon subdivisions,2WKJS@28221|Deltaproteobacteria,2YTZI@29|Myxococcales 28221|Deltaproteobacteria M Belongs to the peptidase S8 family - - - ko:K14645 ko02024,map02024 - - - ko00000,ko00001,ko01000,ko01002,ko03110 - - - Peptidase_S8 HKD3_k127_8987336_0 880073.Calab_0806 2.571e-67 234.0 COG1351@1|root,COG1351@2|Bacteria,2NPQ2@2323|unclassified Bacteria 2|Bacteria F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant thyX - 2.1.1.148 ko:K03465 ko00240,ko00670,ko01100,map00240,map00670,map01100 - R06613 RC00022,RC00332 ko00000,ko00001,ko01000 - - - Thy1 HKD3_k127_8987336_1 1128421.JAGA01000002_gene1731 2.424e-22 112.0 COG1807@1|root,COG1807@2|Bacteria 2|Bacteria M 4-amino-4-deoxy-L-arabinose transferase activity - - - - - - - - - - - - PMT_2 HKD3_k127_898884_0 880073.Calab_1275 4.52e-139 450.0 COG0039@1|root,COG0039@2|Bacteria,2NNY8@2323|unclassified Bacteria 2|Bacteria C Catalyzes the reversible oxidation of malate to oxaloacetate mdh GO:0003674,GO:0003824,GO:0004470,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019752,GO:0030060,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 ko:K00024 ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00012,M00168,M00173,M00346,M00374,M00620,M00740 R00342,R07136 RC00031 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_1360 Ldh_1_C,Ldh_1_N HKD3_k127_898884_1 1232410.KI421421_gene3580 6.289e-83 282.0 COG1212@1|root,COG1212@2|Bacteria,1MUUU@1224|Proteobacteria,42PTX@68525|delta/epsilon subdivisions,2WMQW@28221|Deltaproteobacteria,43TY0@69541|Desulfuromonadales 28221|Deltaproteobacteria M Cytidylyltransferase kdsB - 2.7.7.38 ko:K00979 ko00540,ko01100,map00540,map01100 M00063 R03351,R11396 RC00152,RC00910 ko00000,ko00001,ko00002,ko01000,ko01005 - - - CTP_transf_3 HKD3_k127_898884_2 903818.KI912269_gene278 5.023e-73 256.0 COG0504@1|root,COG0504@2|Bacteria,3Y2MH@57723|Acidobacteria 57723|Acidobacteria F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates pyrG - 6.3.4.2 ko:K01937 ko00240,ko01100,map00240,map01100 M00052 R00571,R00573 RC00010,RC00074 ko00000,ko00001,ko00002,ko01000 - - - CTP_synth_N,GATase HKD3_k127_9004607_5 861299.J421_1965 2.139e-38 151.0 COG2020@1|root,COG2020@2|Bacteria,1ZU79@142182|Gemmatimonadetes 142182|Gemmatimonadetes O Phospholipid methyltransferase - - - - - - - - - - - - PEMT HKD3_k127_9004607_8 1340493.JNIF01000003_gene3800 1.11e-16 92.0 COG2823@1|root,COG2823@2|Bacteria 2|Bacteria S hyperosmotic response - - - - - - - - - - - - BON HKD3_k127_9004607_1 1382306.JNIM01000001_gene1966 1.074e-178 574.0 COG0076@1|root,COG0076@2|Bacteria,2G7N6@200795|Chloroflexi 200795|Chloroflexi E Pyridoxal-dependent decarboxylase conserved domain - - 4.1.1.105,4.1.1.28,4.1.2.27 ko:K01593,ko:K01634 ko00350,ko00360,ko00380,ko00600,ko00901,ko00950,ko00965,ko01100,ko01110,ko04071,ko04726,ko04728,ko05030,ko05031,ko05034,map00350,map00360,map00380,map00600,map00901,map00950,map00965,map01100,map01110,map04071,map04726,map04728,map05030,map05031,map05034 M00037,M00042,M00100 R00685,R00699,R00736,R02080,R02464,R02701,R04909,R06516 RC00264,RC00299,RC00721,RC01266 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Pyridoxal_deC HKD3_k127_9004607_3 1121438.JNJA01000007_gene1640 1.512e-52 206.0 COG0457@1|root,COG0457@2|Bacteria,1RIYN@1224|Proteobacteria,42T31@68525|delta/epsilon subdivisions,2WPYY@28221|Deltaproteobacteria,2M9SE@213115|Desulfovibrionales 28221|Deltaproteobacteria S SGNH hydrolase-like domain, acetyltransferase AlgX - - - - - - - - - - - - ALGX HKD3_k127_9004607_2 941449.dsx2_0368 4.124e-109 377.0 COG1696@1|root,COG1696@2|Bacteria,1MUXN@1224|Proteobacteria,42MIR@68525|delta/epsilon subdivisions,2WJ85@28221|Deltaproteobacteria,2M8UI@213115|Desulfovibrionales 28221|Deltaproteobacteria M PFAM membrane bound O-acyl transferase MBOAT - - - ko:K19294 - - - - ko00000 - - - MBOAT HKD3_k127_9004607_6 292459.STH949 9.339e-32 134.0 COG1489@1|root,COG1489@2|Bacteria,1V1GZ@1239|Firmicutes,24A0M@186801|Clostridia 186801|Clostridia S Belongs to the SfsA family sfsA - - ko:K06206 - - - - ko00000 - - - SfsA HKD3_k127_9004607_0 1380600.AUYN01000001_gene2885 1.278e-216 699.0 COG3540@1|root,COG3540@2|Bacteria,4NFXQ@976|Bacteroidetes,1HY2S@117743|Flavobacteriia 976|Bacteroidetes P PhoD-like phosphatase - - - - - - - - - - - - PhoD HKD3_k127_9004607_7 1121468.AUBR01000096_gene781 2.64e-19 94.0 2AII4@1|root,31902@2|Bacteria,1VY3B@1239|Firmicutes,251KQ@186801|Clostridia,42IFA@68295|Thermoanaerobacterales 186801|Clostridia S Nucleotidyl transferase of unknown function (DUF2204) - - - - - - - - - - - - - HKD3_k127_9004607_4 1123277.KB893186_gene5486 2.96e-39 159.0 COG0845@1|root,COG0845@2|Bacteria,4NIJI@976|Bacteroidetes,47KW8@768503|Cytophagia 976|Bacteroidetes M TIGRFAM efflux transporter, RND family, MFP subunit - - - ko:K02005 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,OEP HKD3_k127_9023769_3 1168067.JAGP01000001_gene2210 9.316e-24 111.0 COG1309@1|root,COG1309@2|Bacteria 2|Bacteria K transcriptional regulator - - - - - - - - - - - - TetR_C_3,TetR_C_4,TetR_N HKD3_k127_9023769_2 518766.Rmar_1777 6.391e-49 193.0 COG1566@1|root,COG1566@2|Bacteria,4PKPZ@976|Bacteroidetes 976|Bacteroidetes V HlyD family secretion protein - - - ko:K01993 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 HKD3_k127_9023769_1 518766.Rmar_1778 9.398e-92 313.0 COG1131@1|root,COG1131@2|Bacteria,4NFW9@976|Bacteroidetes,1FIPW@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes V PFAM ABC transporter related - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_9023769_4 1192034.CAP_0337 6.654e-23 113.0 COG1538@1|root,COG1538@2|Bacteria,1MWX5@1224|Proteobacteria,42SGU@68525|delta/epsilon subdivisions,2WPBP@28221|Deltaproteobacteria,2YVU1@29|Myxococcales 28221|Deltaproteobacteria MU Outer membrane efflux protein - - - ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 1.B.17,2.A.6.2 - - OEP HKD3_k127_9023769_0 234267.Acid_5990 4.849e-106 352.0 COG1131@1|root,COG1131@2|Bacteria,3Y3VU@57723|Acidobacteria 57723|Acidobacteria V AAA domain, putative AbiEii toxin, Type IV TA system - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HKD3_k127_9023769_5 1123368.AUIS01000024_gene949 1.473e-22 108.0 COG0842@1|root,COG0842@2|Bacteria,1MW5R@1224|Proteobacteria,1RPB4@1236|Gammaproteobacteria,2NBU9@225057|Acidithiobacillales 225057|Acidithiobacillales V ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 HKD3_k127_9028176_5 1267535.KB906767_gene2974 3.552e-96 327.0 COG2271@1|root,COG2271@2|Bacteria 2|Bacteria G transmembrane transporter activity - - - - - - - - - - - - MFS_1 HKD3_k127_9028176_3 497964.CfE428DRAFT_4153 9.262e-111 383.0 COG0329@1|root,COG0329@2|Bacteria,46UU4@74201|Verrucomicrobia 74201|Verrucomicrobia EM Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate - - 4.3.3.7 ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R10147 RC03062,RC03063 ko00000,ko00001,ko00002,ko01000 - - - DHDPS HKD3_k127_9028176_4 1381123.AYOD01000035_gene3383 2.075e-102 341.0 COG3836@1|root,COG3836@2|Bacteria,1MUSG@1224|Proteobacteria,2TT2W@28211|Alphaproteobacteria,43JQZ@69277|Phyllobacteriaceae 28211|Alphaproteobacteria G Belongs to the HpcH HpaI aldolase family hpcH GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0008150,GO:0008152,GO:0016829,GO:0016830,GO:0016832,GO:0044238,GO:0044424,GO:0044464,GO:0071704 4.1.2.20,4.1.2.52 ko:K01630,ko:K02510 ko00053,ko00350,ko01120,map00053,map00350,map01120 - R01645,R01647,R02754,R03277 RC00307,RC00435,RC00572,RC00574,RC03057 ko00000,ko00001,ko01000 - - - HpcH_HpaI HKD3_k127_9028176_1 1005395.CSV86_22336 3.607e-195 617.0 COG2271@1|root,COG2271@2|Bacteria,1MVPS@1224|Proteobacteria,1RNMV@1236|Gammaproteobacteria,1YV1E@136845|Pseudomonas putida group 1236|Gammaproteobacteria G major facilitator superfamily gudP GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0015711,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0044425,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944 - ko:K03535 - - - - ko00000,ko02000 2.A.1.14.1 - iSSON_1240.SSON_2946 MFS_1 HKD3_k127_9028176_0 1121033.AUCF01000047_gene145 5.159e-221 692.0 COG4948@1|root,COG4948@2|Bacteria,1NAKW@1224|Proteobacteria,2U12J@28211|Alphaproteobacteria 28211|Alphaproteobacteria M mandelate racemase muconate lactonizing gudD - 4.2.1.40 ko:K01706 ko00053,ko01100,map00053,map01100 - R02752,R08056 RC00543 ko00000,ko00001,ko01000 - - - MR_MLE_C,MR_MLE_N HKD3_k127_9028176_6 1123508.JH636443_gene4957 2.853e-78 280.0 COG3356@1|root,COG3356@2|Bacteria,2IXX5@203682|Planctomycetes 203682|Planctomycetes S PFAM Neutral alkaline nonlysosomal ceramidase - - - - - - - - - - - - Ceramidase_alk HKD3_k127_9028176_2 378806.STAUR_3005 1.238e-124 416.0 COG1249@1|root,COG1249@2|Bacteria,1MVVE@1224|Proteobacteria,42Z7G@68525|delta/epsilon subdivisions,2WU0D@28221|Deltaproteobacteria,2YU48@29|Myxococcales 28221|Deltaproteobacteria C Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain sthA - 1.6.1.1 ko:K00322 ko00760,ko01100,map00760,map01100 - R00112 RC00001 ko00000,ko00001,ko01000 - - - Pyr_redox_2,Pyr_redox_dim HKD3_k127_9029366_1 1411123.JQNH01000001_gene1616 7.325e-112 368.0 COG0465@1|root,COG0465@2|Bacteria,1MU6J@1224|Proteobacteria,2TRNK@28211|Alphaproteobacteria 28211|Alphaproteobacteria O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins - - - ko:K03798 - M00742 - - ko00000,ko00002,ko01000,ko01002,ko03110 - - - AAA,FtsH_ext,Peptidase_M41 HKD3_k127_9029366_0 761193.Runsl_4658 1.923e-152 492.0 COG0673@1|root,COG0673@2|Bacteria,4NEC6@976|Bacteroidetes,47KZS@768503|Cytophagia 976|Bacteroidetes S PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA HKD3_k127_9029366_5 305900.GV64_11940 1.669e-47 175.0 COG0590@1|root,COG0590@2|Bacteria 2|Bacteria FJ tRNA wobble adenosine to inosine editing tadA - 3.5.4.3,3.5.4.33 ko:K01487,ko:K11991 ko00230,ko01100,map00230,map01100 - R01676,R10223 RC00204,RC00477 ko00000,ko00001,ko01000,ko03016 - - - MafB19-deam,dCMP_cyt_deam_1 HKD3_k127_9029366_7 1123242.JH636436_gene22 2.636e-45 170.0 COG3011@1|root,COG3011@2|Bacteria,2J08P@203682|Planctomycetes 203682|Planctomycetes S Protein of unknown function, DUF393 - - - - - - - - - - - - DUF393 HKD3_k127_9029366_6 290315.Clim_1053 5.316e-47 179.0 COG1280@1|root,COG1280@2|Bacteria 2|Bacteria E homoserine transmembrane transporter activity chpE - - ko:K06600,ko:K06895 - - - - ko00000,ko02000,ko02035 2.A.75.1,2.A.76 - - LysE HKD3_k127_9029366_4 1434325.AZQN01000011_gene3742 2.158e-59 214.0 28N6F@1|root,2ZBBB@2|Bacteria,4NGM1@976|Bacteroidetes,47P0U@768503|Cytophagia 976|Bacteroidetes - - - - - - - - - - - - - - - HKD3_k127_9029366_3 243231.GSU0206 1.23e-82 286.0 COG0428@1|root,COG0428@2|Bacteria,1MWEZ@1224|Proteobacteria,42NT2@68525|delta/epsilon subdivisions,2WJM5@28221|Deltaproteobacteria,43SQR@69541|Desulfuromonadales 28221|Deltaproteobacteria P ZIP Zinc transporter zupT - - ko:K07238 - - - - ko00000,ko02000 2.A.5.5 - - Zip HKD3_k127_9029366_2 522306.CAP2UW1_1318 3.84e-98 330.0 COG3597@1|root,COG3597@2|Bacteria,1QG9J@1224|Proteobacteria,2VIRR@28216|Betaproteobacteria 28216|Betaproteobacteria P Tellurite resistance protein TerB - - - - - - - - - - - - DUF533,TerB HKD3_k127_9053465_3 292459.STH2399 4.894e-30 130.0 COG0745@1|root,COG0745@2|Bacteria,1VHJ1@1239|Firmicutes,24QWF@186801|Clostridia 186801|Clostridia T PFAM response regulator receiver - - - - - - - - - - - - Response_reg HKD3_k127_9053465_2 1121440.AUMA01000016_gene133 3.358e-30 130.0 COG0745@1|root,COG0745@2|Bacteria,1MY2Z@1224|Proteobacteria,42MP1@68525|delta/epsilon subdivisions,2WJPD@28221|Deltaproteobacteria,2M7S0@213115|Desulfovibrionales 28221|Deltaproteobacteria T PFAM response regulator receiver phoB - - ko:K07657 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C HKD3_k127_9053465_5 1125863.JAFN01000001_gene865 2.47e-17 94.0 COG0265@1|root,COG0265@2|Bacteria,1MU63@1224|Proteobacteria,42NB6@68525|delta/epsilon subdivisions,2WIWE@28221|Deltaproteobacteria 28221|Deltaproteobacteria M Belongs to the peptidase S1C family degP-2 - 3.4.21.107 ko:K04771 ko01503,ko02020,map01503,map02020 M00728 - - ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 - - - PDZ_2,Trypsin_2 HKD3_k127_9053465_7 272630.MexAM1_META1p3744 1.14e-05 52.0 COG0642@1|root,COG2205@2|Bacteria,1NRP8@1224|Proteobacteria,2TWG2@28211|Alphaproteobacteria,1JSYM@119045|Methylobacteriaceae 28211|Alphaproteobacteria T histidine kinase A domain protein - - 2.7.13.3 ko:K07647,ko:K07678 ko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111 M00455,M00475 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - CHASE8,EAL,HAMP,HATPase_c,HisKA,Hpt,Response_reg HKD3_k127_9053465_4 102129.Lepto7375DRAFT_2341 2.216e-29 137.0 COG0392@1|root,COG0392@2|Bacteria,1G41A@1117|Cyanobacteria,1HD8Q@1150|Oscillatoriales 1117|Cyanobacteria S Lysylphosphatidylglycerol synthase TM region - - - ko:K07027 - - - - ko00000,ko02000 4.D.2 - - LPG_synthase_TM HKD3_k127_9053465_0 933262.AXAM01000098_gene3457 1.749e-98 343.0 COG4232@1|root,COG4232@2|Bacteria,1MU8W@1224|Proteobacteria,42MVQ@68525|delta/epsilon subdivisions,2WMS6@28221|Deltaproteobacteria,2MNJX@213118|Desulfobacterales 28221|Deltaproteobacteria CO Cytochrome C biogenesis protein transmembrane region dsbD - 1.8.1.8 ko:K04084 - - - - ko00000,ko01000,ko03110 5.A.1.1 - - DsbC,DsbD,Thioredoxin_7 HKD3_k127_9053465_6 344747.PM8797T_11454 5.881e-09 69.0 COG1331@1|root,COG4232@1|root,COG1331@2|Bacteria,COG4232@2|Bacteria,2IX0N@203682|Planctomycetes 203682|Planctomycetes O COG1331 Highly conserved protein containing a thioredoxin domain - - - ko:K06888 - - - - ko00000 - - - DsbC,GlcNAc_2-epim,Thioredox_DsbH HKD3_k127_9053465_1 671143.DAMO_1616 9.285e-44 175.0 COG1034@1|root,COG1034@2|Bacteria 2|Bacteria C ATP synthesis coupled electron transport nuoG - 1.6.5.3 ko:K00336 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Fer2_4,Molybdop_Fe4S4,Molybdopterin,NADH-G_4Fe-4S_3 HKD3_k127_9088767_2 690850.Desaf_3186 5.203e-69 244.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42P8Q@68525|delta/epsilon subdivisions,2WK2B@28221|Deltaproteobacteria,2MABU@213115|Desulfovibrionales 28221|Deltaproteobacteria T two component, sigma54 specific, transcriptional regulator, Fis family - - - ko:K11384 ko02020,map02020 M00505 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat HKD3_k127_9088767_1 1340493.JNIF01000003_gene3123 2.323e-119 406.0 COG1858@1|root,COG1858@2|Bacteria,3Y46D@57723|Acidobacteria 57723|Acidobacteria P Di-haem cytochrome c peroxidase - - 1.11.1.5 ko:K00428 - - - - ko00000,ko01000 - - - CCP_MauG,Cytochrom_C HKD3_k127_9088767_3 180281.CPCC7001_420 4.093e-43 164.0 COG1528@1|root,COG1528@2|Bacteria,1G39Z@1117|Cyanobacteria,22THC@167375|Cyanobium 1117|Cyanobacteria P Ferritin-like domain - - 1.16.3.2 ko:K02217 - - - - ko00000,ko01000 - - - Ferritin HKD3_k127_9088767_4 1408422.JHYF01000011_gene3399 2.959e-17 84.0 COG3478@1|root,COG3478@2|Bacteria,1VKSK@1239|Firmicutes,24WD3@186801|Clostridia 186801|Clostridia S Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) - - - - - - - - - - - - - HKD3_k127_9088767_0 1047013.AQSP01000142_gene165 8.451e-204 653.0 COG3591@1|root,COG3591@2|Bacteria,2NQEJ@2323|unclassified Bacteria 2|Bacteria E Peptidase S46 - - - - - - - - - - - - Peptidase_S46 HKD3_k127_908936_1 1157637.KB892105_gene1898 1.147e-19 90.0 COG2057@1|root,COG2057@2|Bacteria,2GKV9@201174|Actinobacteria 201174|Actinobacteria I 3-oxoacid CoA-transferase, B subunit scoB - 2.8.3.5 ko:K01027,ko:K01029 ko00072,ko00280,ko00650,map00072,map00280,map00650 - R00410 RC00014 ko00000,ko00001,ko01000 - - - CoA_trans HKD3_k127_908936_0 861299.J421_3908 7.136e-40 156.0 COG1595@1|root,COG1595@2|Bacteria,1ZT3B@142182|Gemmatimonadetes 142182|Gemmatimonadetes K ECF sigma factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 HKD3_k127_908936_2 56780.SYN_00516 4.422e-12 78.0 COG1664@1|root,COG1664@2|Bacteria,1MUS9@1224|Proteobacteria,43BNZ@68525|delta/epsilon subdivisions,2X70B@28221|Deltaproteobacteria 28221|Deltaproteobacteria M Polymer-forming cytoskeletal - - - - - - - - - - - - - HKD3_k127_9108543_2 246194.CHY_1370 1.933e-19 90.0 COG0479@1|root,COG0479@2|Bacteria,1TP17@1239|Firmicutes,24AN0@186801|Clostridia,42H51@68295|Thermoanaerobacterales 186801|Clostridia C 2Fe-2S iron-sulfur cluster binding domain - - 1.3.5.1,1.3.5.4 ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 - - - Fer2_3,Fer4_8 HKD3_k127_9108543_3 246194.CHY_1371 2.185e-14 81.0 COG2142@1|root,COG2142@2|Bacteria 2|Bacteria C succinate dehydrogenase activity sdhD - - ko:K00242,ko:K00246 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020 M00009,M00011,M00149,M00150,M00173 R02164 RC00045 ko00000,ko00001,ko00002 - - - Sdh_cyt HKD3_k127_9108543_1 246194.CHY_1372 1.95e-32 131.0 COG2009@1|root,COG2009@2|Bacteria,1VKGI@1239|Firmicutes,24VB1@186801|Clostridia 186801|Clostridia C TIGRFAM Succinate dehydrogenase, cytochrome b556 subunit - - - ko:K00241 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002 - - - Sdh_cyt HKD3_k127_9108543_0 246194.CHY_1373 3.09e-231 728.0 COG1053@1|root,COG1053@2|Bacteria,1TPAR@1239|Firmicutes,247SY@186801|Clostridia,42FNP@68295|Thermoanaerobacterales 186801|Clostridia C fumarate reductase, flavoprotein subunit sdhA - 1.3.5.1,1.3.5.4 ko:K00239,ko:K00244 ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,ko05134,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020,map05134 M00009,M00011,M00149,M00150,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 - - - FAD_binding_2,Succ_DH_flav_C HKD3_k127_91273_5 344747.PM8797T_24941 5.27e-72 247.0 COG3119@1|root,COG3119@2|Bacteria,2IX9T@203682|Planctomycetes 203682|Planctomycetes P COG3119 Arylsulfatase A and related enzymes - - - - - - - - - - - - DUF4976,Sulfatase HKD3_k127_91273_2 880073.Calab_0643 1.26e-114 382.0 COG1940@1|root,COG1940@2|Bacteria 2|Bacteria GK ROK family - - 2.7.1.188,2.7.1.2,2.7.1.214,2.7.1.60,5.1.3.9 ko:K00845,ko:K13967,ko:K19979,ko:K20433 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko00525,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map00525,map01100,map01110,map01120,map01130,map01200 M00001,M00549,M00814,M00815 R00299,R01600,R01786,R02087,R02705,R11185,R11234 RC00002,RC00017,RC00290 ko00000,ko00001,ko00002,ko01000 - - - ROK HKD3_k127_91273_1 880073.Calab_0644 2.523e-129 447.0 COG0738@1|root,COG0738@2|Bacteria,2NQUK@2323|unclassified Bacteria 2|Bacteria G Major Facilitator Superfamily - - - - - - - - - - - - MFS_1 HKD3_k127_91273_0 1077285.AGDG01000002_gene2050 4.627e-295 924.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMMF@200643|Bacteroidia,4ANZU@815|Bacteroidaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Alginate_lyase,Glyco_hydro_92 HKD3_k127_91273_3 204669.Acid345_1052 1.221e-83 308.0 COG0457@1|root,COG0515@1|root,COG5616@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,COG5616@2|Bacteria,3Y2HR@57723|Acidobacteria,2JI02@204432|Acidobacteriia 204432|Acidobacteriia KLT Tetratricopeptide repeats - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase,TPR_11,TPR_16,TPR_2,Trans_reg_C HKD3_k127_91273_6 234267.Acid_0107 1.143e-20 101.0 COG1366@1|root,COG1366@2|Bacteria,3Y4U6@57723|Acidobacteria 57723|Acidobacteria T Belongs to the anti-sigma-factor antagonist family - - - ko:K04749 - - - - ko00000,ko03021 - - - STAS HKD3_k127_91273_4 1183438.GKIL_2082 1.324e-75 257.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,1GDGA@1117|Cyanobacteria 1117|Cyanobacteria EU Prolyl oligopeptidase family - - - - - - - - - - - - PD40,Peptidase_S9 HKD3_k127_91629_3 1123278.KB893546_gene5018 9.084e-57 204.0 COG2993@1|root,COG3278@1|root,COG2993@2|Bacteria,COG3278@2|Bacteria,4NEGM@976|Bacteroidetes,47MI5@768503|Cytophagia 976|Bacteroidetes C Belongs to the heme-copper respiratory oxidase family ccoN - 1.9.3.1 ko:K15862 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 - - ko00000,ko00001,ko00002,ko01000 3.D.4.3 - - COX1,FixO HKD3_k127_91629_4 762903.Pedsa_0370 2.698e-42 162.0 COG2010@1|root,COG2010@2|Bacteria,4NFMJ@976|Bacteroidetes,1IRZW@117747|Sphingobacteriia 976|Bacteroidetes C PFAM Cytochrome c, class I ccoP - - ko:K00406 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 - - ko00000,ko00001,ko00002 3.D.4.3 - - Cytochrome_CBB3,FixP_N HKD3_k127_91629_1 756272.Plabr_3049 1.282e-95 332.0 COG0348@1|root,COG0348@2|Bacteria,2IXC7@203682|Planctomycetes 203682|Planctomycetes C IG-like fold at C-terminal of FixG, putative oxidoreductase - - - - - - - - - - - - Fer4_18,Fer4_5,FixG_C HKD3_k127_91629_7 379066.GAU_3779 4.83e-09 68.0 COG5456@1|root,COG5456@2|Bacteria,1ZUVU@142182|Gemmatimonadetes 142182|Gemmatimonadetes P FixH - - - - - - - - - - - - FixH HKD3_k127_91629_0 379066.GAU_3781 3.068e-171 577.0 COG2217@1|root,COG2608@1|root,COG2217@2|Bacteria,COG2608@2|Bacteria,1ZU8D@142182|Gemmatimonadetes 142182|Gemmatimonadetes P Putative metal-binding domain of cation transport ATPase - - 3.6.3.4 ko:K01533 - - R00086 RC00002 ko00000,ko01000 3.A.3.5 - - ATPase-cat_bd,E1-E2_ATPase,HMA,Hydrolase HKD3_k127_91629_6 1151127.KB906326_gene421 9.961e-10 64.0 COG3197@1|root,COG3197@2|Bacteria,1NG90@1224|Proteobacteria,1SGQG@1236|Gammaproteobacteria,1YQXP@136843|Pseudomonas fluorescens group 1236|Gammaproteobacteria P Cytochrome oxidase maturation protein ccoS - - - - - - - - - - - FixS HKD3_k127_91629_5 504472.Slin_5664 4.884e-35 145.0 COG2010@1|root,COG2010@2|Bacteria,4NF0A@976|Bacteroidetes,47J8Z@768503|Cytophagia 976|Bacteroidetes C PFAM Class III cytochrome C family actA - - - - - - - - - - - Cytochrom_C,Cytochrom_CIII,Cytochrome_C7 HKD3_k127_91629_2 765869.BDW_05540 1.647e-77 286.0 COG0243@1|root,COG0437@1|root,COG0243@2|Bacteria,COG0437@2|Bacteria,1MU1B@1224|Proteobacteria,42NEG@68525|delta/epsilon subdivisions,2MTN3@213481|Bdellovibrionales,2WKHA@28221|Deltaproteobacteria 213481|Bdellovibrionales C iron-sulfur binding actB - - ko:K00184 - - - - ko00000 5.A.3 - - Fer4_7,Molybdop_Fe4S4,Molybdopterin,Molydop_binding HKD3_k127_9222400_8 1192034.CAP_5609 1.173e-89 309.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,1P64D@1224|Proteobacteria,439PY@68525|delta/epsilon subdivisions,2X51T@28221|Deltaproteobacteria,2YZZT@29|Myxococcales 28221|Deltaproteobacteria KLTU Protein kinase domain - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase HKD3_k127_9222400_6 204669.Acid345_4390 1.046e-131 454.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,3Y69R@57723|Acidobacteria,2JKIQ@204432|Acidobacteriia 204432|Acidobacteriia KLT Protein kinase domain - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PD40,Pkinase HKD3_k127_9222400_4 204669.Acid345_4117 3.984e-142 479.0 COG0457@1|root,COG0515@1|root,COG5616@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,COG5616@2|Bacteria,3Y2HR@57723|Acidobacteria,2JI02@204432|Acidobacteriia 204432|Acidobacteriia KLT Tetratricopeptide repeats - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase,TPR_11,TPR_16,TPR_2,Trans_reg_C HKD3_k127_9222400_2 234267.Acid_5940 6.001e-173 587.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,3Y2PK@57723|Acidobacteria 57723|Acidobacteria KLTU WD40 domain protein beta Propeller - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase HKD3_k127_9222400_5 639030.JHVA01000001_gene1214 7.253e-137 466.0 COG0515@1|root,COG5616@1|root,COG0515@2|Bacteria,COG5616@2|Bacteria,3Y2HR@57723|Acidobacteria,2JI02@204432|Acidobacteriia 2|Bacteria KLT Tetratricopeptide repeats - - 2.7.11.1 ko:K08282,ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase,TPR_16,TPR_2,TPR_8 HKD3_k127_9222400_13 1267535.KB906767_gene4448 3.866e-27 124.0 COG2304@1|root,COG2304@2|Bacteria,3Y30G@57723|Acidobacteria,2JIK2@204432|Acidobacteriia 204432|Acidobacteriia S PFAM von Willebrand factor type A - - - - - - - - - - - - VWA,VWA_2,VWA_3 HKD3_k127_9222400_16 278963.ATWD01000002_gene794 2.828e-07 64.0 2EXAB@1|root,33QKZ@2|Bacteria,3Y6WS@57723|Acidobacteria 57723|Acidobacteria - - - - - - - - - - - - - - - HKD3_k127_9222400_12 1123393.KB891316_gene2013 7.41e-38 147.0 COG0025@1|root,COG0025@2|Bacteria,1QTZ5@1224|Proteobacteria,2WGIC@28216|Betaproteobacteria 28216|Betaproteobacteria P Zn-finger in ubiquitin-hydrolases and other protein - - - - - - - - - - - - zf-UBP HKD3_k127_9222400_1 1395571.TMS3_0107090 1.259e-176 568.0 COG1262@1|root,COG1262@2|Bacteria,1MUNC@1224|Proteobacteria,1RQI4@1236|Gammaproteobacteria 1236|Gammaproteobacteria Q methyltransferase sumf2 - - - - - - - - - - - DinB_2,FGE-sulfatase,Methyltransf_11,Methyltransf_12,Methyltransf_23,Methyltransf_25,Methyltransf_31 HKD3_k127_9222400_9 1254432.SCE1572_37350 5.682e-86 295.0 COG4301@1|root,COG4301@2|Bacteria,1MUCG@1224|Proteobacteria,42SR8@68525|delta/epsilon subdivisions,2WPN0@28221|Deltaproteobacteria,2Z0GW@29|Myxococcales 28221|Deltaproteobacteria S Histidine-specific methyltransferase, SAM-dependent - - 2.1.1.44 ko:K18911 ko00340,map00340 - R01169 RC00003,RC02308 ko00000,ko00001,ko01000 - - - Methyltransf_33 HKD3_k127_9222400_0 1267535.KB906767_gene4658 3.448e-285 888.0 COG0492@1|root,COG3437@1|root,COG0492@2|Bacteria,COG3437@2|Bacteria,3Y3TK@57723|Acidobacteria,2JIM5@204432|Acidobacteriia 204432|Acidobacteriia KOT Pyridine nucleotide-disulphide oxidoreductase - - 1.8.1.9 ko:K00384 ko00450,map00450 - R02016,R03596,R09372 RC00013,RC02518,RC02873 ko00000,ko00001,ko01000 - - - Pyr_redox_2,Pyr_redox_3,Response_reg HKD3_k127_9222400_15 1267533.KB906738_gene2404 1.549e-13 70.0 COG4191@1|root,COG4191@2|Bacteria,3Y9CT@57723|Acidobacteria,2JP6N@204432|Acidobacteriia 204432|Acidobacteriia T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c,cNMP_binding HKD3_k127_9222400_3 1267535.KB906767_gene4657 8.864e-170 543.0 COG3852@1|root,COG3852@2|Bacteria,3Y3JR@57723|Acidobacteria,2JIY1@204432|Acidobacteriia 204432|Acidobacteriia T Cyclic nucleotide-monophosphate binding domain - - - - - - - - - - - - HATPase_c,cNMP_binding HKD3_k127_9222400_11 204669.Acid345_0838 1.04e-43 172.0 COG2208@1|root,COG2208@2|Bacteria,3Y6VQ@57723|Acidobacteria,2JKZZ@204432|Acidobacteriia 204432|Acidobacteriia KT Sigma factor PP2C-like phosphatases - - - - - - - - - - - - SpoIIE HKD3_k127_9222400_14 1297570.MESS4_670034 1.535e-18 97.0 2D8WY@1|root,32TS4@2|Bacteria,1N2W6@1224|Proteobacteria,2UDGB@28211|Alphaproteobacteria 28211|Alphaproteobacteria - - - - - - - - - - - - - - - HKD3_k127_9222400_10 1303518.CCALI_02490 2.308e-48 185.0 COG1082@1|root,COG1082@2|Bacteria 2|Bacteria G myo-inosose-2 dehydratase activity - - - - - - - - - - - - AP_endonuc_2 HKD3_k127_9222400_7 1499967.BAYZ01000074_gene2145 4.615e-131 434.0 COG0235@1|root,COG0235@2|Bacteria 2|Bacteria G Class ii aldolase - - 2.2.1.8,4.1.2.17 ko:K01628,ko:K18847 ko00051,ko01120,map00051,map01120 - R02262 RC00603,RC00604 ko00000,ko00001,ko01000 - - - Aldolase_II HKD3_k127_9287832_0 420662.Mpe_A1015 1.649e-108 356.0 COG1703@1|root,COG1703@2|Bacteria,1MVI0@1224|Proteobacteria,2VIRF@28216|Betaproteobacteria,1KJBP@119065|unclassified Burkholderiales 28216|Betaproteobacteria E ArgK protein argK - - ko:K07588 - - - - ko00000,ko01000 - - - ArgK HKD3_k127_9287832_1 1157708.KB907461_gene1559 5.545e-31 135.0 COG3391@1|root,COG3391@2|Bacteria,1NT97@1224|Proteobacteria,2VSR3@28216|Betaproteobacteria,4AG0Z@80864|Comamonadaceae 28216|Betaproteobacteria G NHL repeat - - - - - - - - - - - - NHL HKD3_k127_9292400_0 935863.AWZR01000006_gene1393 8.048e-184 588.0 COG1012@1|root,COG1012@2|Bacteria,1MY2V@1224|Proteobacteria,1RQG6@1236|Gammaproteobacteria,1X5BE@135614|Xanthomonadales 135614|Xanthomonadales C Ketoglutarate semialdehyde dehydrogenase - - 1.2.1.26 ko:K13877 ko00040,ko00053,map00040,map00053 - R00264 RC00080 ko00000,ko00001,ko01000 - - - Aldedh HKD3_k127_9292400_1 266117.Rxyl_0545 5.372e-45 166.0 COG3970@1|root,COG3970@2|Bacteria,2GN7V@201174|Actinobacteria 201174|Actinobacteria S fumarylacetoacetate (FAA) hydrolase - - 4.2.1.141 ko:K14259 ko00040,map00040 - R09186 RC00429 ko00000,ko00001,ko01000 - - - FAA_hydrolase HKD3_k127_9382615_1 1047013.AQSP01000123_gene1542 5.294e-167 537.0 COG2204@1|root,COG2204@2|Bacteria,2NP3X@2323|unclassified Bacteria 2|Bacteria T COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains ntrX - - ko:K13599 ko02020,map02020 M00498 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat HKD3_k127_9382615_4 338963.Pcar_3083 2.774e-89 312.0 COG0265@1|root,COG0265@2|Bacteria,1MU63@1224|Proteobacteria,42NB6@68525|delta/epsilon subdivisions,2WIWE@28221|Deltaproteobacteria,43UDA@69541|Desulfuromonadales 28221|Deltaproteobacteria M PFAM peptidase S1 and S6, chymotrypsin Hap degP - 3.4.21.107 ko:K04771 ko01503,ko02020,map01503,map02020 M00728 - - ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 - - - PDZ_2,Trypsin_2 HKD3_k127_9382615_0 1121430.JMLG01000005_gene768 2.326e-205 659.0 COG0272@1|root,COG0272@2|Bacteria,1TPQ3@1239|Firmicutes,248AX@186801|Clostridia,260BN@186807|Peptococcaceae 186801|Clostridia L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA ligA - 6.5.1.2 ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 - R00382 RC00005 ko00000,ko00001,ko01000,ko03032,ko03400 - - - BRCT,DNA_ligase_OB,DNA_ligase_ZBD,DNA_ligase_aden,HHH_2,HHH_5 HKD3_k127_9382615_6 1125863.JAFN01000001_gene236 8.328e-81 281.0 COG0142@1|root,COG0142@2|Bacteria,1MUK6@1224|Proteobacteria,42M1B@68525|delta/epsilon subdivisions,2WK2M@28221|Deltaproteobacteria 28221|Deltaproteobacteria H Belongs to the FPP GGPP synthase family ispB - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 ko:K02523,ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00364,M00366 R01658,R02003,R02061,R09248 RC00279 ko00000,ko00001,ko00002,ko01000,ko01006 - - - polyprenyl_synt HKD3_k127_9382615_9 370438.PTH_0070 3.862e-59 214.0 COG0084@1|root,COG0084@2|Bacteria,1TNY1@1239|Firmicutes,248HE@186801|Clostridia,260P1@186807|Peptococcaceae 186801|Clostridia L TIGRFAM hydrolase, TatD family tatD - - ko:K03424 - - - - ko00000,ko01000 - - - TatD_DNase HKD3_k127_9382615_14 330214.NIDE2927 3.598e-30 125.0 COG0073@1|root,COG0143@1|root,COG0073@2|Bacteria,COG0143@2|Bacteria,3J0AI@40117|Nitrospirae 40117|Nitrospirae J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation metG - 6.1.1.10 ko:K01874 ko00450,ko00970,map00450,map00970 M00359,M00360 R03659,R04773 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,tRNA-synt_1g,tRNA_bind HKD3_k127_9382615_3 1499967.BAYZ01000118_gene3244 2.756e-102 349.0 COG1641@1|root,COG1641@2|Bacteria,2NNX0@2323|unclassified Bacteria 2|Bacteria S Protein of unknown function DUF111 larC - 4.99.1.12 ko:K06898,ko:K09121 - - - - ko00000,ko01000 - - - DUF111 HKD3_k127_9382615_11 1303518.CCALI_01020 1.836e-52 194.0 COG2003@1|root,COG2003@2|Bacteria 2|Bacteria L Belongs to the UPF0758 family radC - - ko:K03630 - - - - ko00000 - - - HHH,RadC HKD3_k127_9382615_7 266117.Rxyl_1341 1.651e-77 268.0 COG0846@1|root,COG0846@2|Bacteria,2GJI3@201174|Actinobacteria,4CU5Y@84995|Rubrobacteria 84995|Rubrobacteria K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form - - - ko:K12410 - - - - ko00000,ko01000 - - - SIR2 HKD3_k127_9382615_2 706587.Desti_0932 1.955e-136 451.0 COG0471@1|root,COG0471@2|Bacteria,1MUSA@1224|Proteobacteria,42MAP@68525|delta/epsilon subdivisions,2WIYI@28221|Deltaproteobacteria 28221|Deltaproteobacteria P PFAM Sodium sulphate symporter sdcS - - ko:K14445 - - - - ko00000,ko02000 2.A.47.1 - - Na_sulph_symp HKD3_k127_9382615_12 477974.Daud_1604 3.759e-48 184.0 COG0253@1|root,COG0253@2|Bacteria,1TPMN@1239|Firmicutes,24AGY@186801|Clostridia,260JZ@186807|Peptococcaceae 186801|Clostridia E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan dapF - 5.1.1.7 ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00527 R02735 RC00302 ko00000,ko00001,ko00002,ko01000 - - - DAP_epimerase HKD3_k127_9382615_15 222534.KB893783_gene5326 3.618e-24 111.0 COG0500@1|root,COG2226@2|Bacteria 2|Bacteria Q methyltransferase - - - - - - - - - - - - Methyltransf_11,Methyltransf_25,Methyltransf_31 HKD3_k127_9382615_5 489825.LYNGBM3L_22490 3.02e-87 308.0 COG0578@1|root,COG0578@2|Bacteria,1G1T3@1117|Cyanobacteria,1H86N@1150|Oscillatoriales 1117|Cyanobacteria C FAD dependent oxidoreductase - - 1.1.5.3 ko:K00111 ko00564,ko01110,map00564,map01110 - R00848 RC00029 ko00000,ko00001,ko01000 - - - DAO,DAO_C HKD3_k127_9382615_13 292459.STH2430 1.322e-47 195.0 COG1490@1|root,COG1490@2|Bacteria,1V6GH@1239|Firmicutes,24J90@186801|Clostridia 186801|Clostridia J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality dtd - - ko:K07560 - - - - ko00000,ko01000,ko03016 - - - Tyr_Deacylase HKD3_k127_9382615_8 269799.Gmet_3336 2.17e-72 252.0 COG0037@1|root,COG0037@2|Bacteria,1MW5Q@1224|Proteobacteria,42MMC@68525|delta/epsilon subdivisions,2WN12@28221|Deltaproteobacteria,43TI0@69541|Desulfuromonadales 28221|Deltaproteobacteria J Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system ttcA - - ko:K14058 - - - - ko00000,ko03016 - - - ATP_bind_3 HKD3_k127_9382615_10 1128421.JAGA01000002_gene1063 1.088e-52 199.0 COG0438@1|root,COG0438@2|Bacteria 2|Bacteria M transferase activity, transferring glycosyl groups - - - - - - - - - - - - Glycos_transf_1 HKD3_k127_9382615_16 1499967.BAYZ01000005_gene5436 7.283e-15 79.0 COG0457@1|root,COG1807@1|root,COG0457@2|Bacteria,COG1807@2|Bacteria,2NQY2@2323|unclassified Bacteria 2|Bacteria M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - - - - - - - - - - DUF2723,PMT,PMT_2,TPR_19 HKD3_k127_9436100_0 93220.LV28_16715 2.358e-17 84.0 COG2960@1|root,COG2960@2|Bacteria,1N7AH@1224|Proteobacteria,2VVR4@28216|Betaproteobacteria,1K9GB@119060|Burkholderiaceae 28216|Betaproteobacteria S Membrane fusogenic activity yqiC - - ko:K09806 - - - - ko00000 - - - BMFP HKD3_k127_9540085_0 1449049.JONW01000005_gene1182 0.0 1161.0 COG1882@1|root,COG1882@2|Bacteria,1MWBF@1224|Proteobacteria,2TT7K@28211|Alphaproteobacteria 28211|Alphaproteobacteria C formate C-acetyltransferase glycine radical - - 2.3.1.54 ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 - R00212,R06987 RC00004,RC01181,RC02742,RC02833 ko00000,ko00001,ko01000 - - - Gly_radical,PFL-like HKD3_k127_9540085_1 1449049.JONW01000005_gene1184 5.549e-240 755.0 COG1760@1|root,COG1760@2|Bacteria,1MUZN@1224|Proteobacteria,2TR3D@28211|Alphaproteobacteria,2KFZ2@204458|Caulobacterales 1224|Proteobacteria E Serine dehydratase - - 4.3.1.17 ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 - R00220,R00590 RC00331,RC02600 ko00000,ko00001,ko01000 - - - SDH_alpha,SDH_beta HKD3_k127_9540085_3 1210884.HG799469_gene14136 5.101e-13 76.0 COG2197@1|root,COG2197@2|Bacteria,2IZND@203682|Planctomycetes 203682|Planctomycetes K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - - - - - - - - - - GerE,Response_reg HKD3_k127_9540085_2 1506583.JQJY01000001_gene551 3.183e-27 112.0 COG0252@1|root,COG0252@2|Bacteria,4NFKG@976|Bacteroidetes,1I02F@117743|Flavobacteriia,2NUFC@237|Flavobacterium 976|Bacteroidetes EJ Belongs to the asparaginase 1 family ansB - 3.5.1.1 ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 - R00485 RC00010,RC02798 ko00000,ko00001,ko01000 - - - Asparaginase HKD3_k127_967614_4 1006000.GKAS_02123 1.053e-77 268.0 COG1028@1|root,COG1028@2|Bacteria,1MU6X@1224|Proteobacteria,1RMBB@1236|Gammaproteobacteria 1236|Gammaproteobacteria IQ reductase fabG GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0030497,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0048037,GO:0050661,GO:0050662,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.1.1.100 ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - iAF1260.b1093,iAPECO1_1312.APECO1_174,iBWG_1329.BWG_0941,iE2348C_1286.E2348C_1185,iEC55989_1330.EC55989_1205,iECABU_c1320.ECABU_c13060,iECDH10B_1368.ECDH10B_1165,iECDH1ME8569_1439.ECDH1ME8569_1028,iECED1_1282.ECED1_1236,iECIAI39_1322.ECIAI39_2068,iECNA114_1301.ECNA114_1150,iECO103_1326.ECO103_1138,iECOK1_1307.ECOK1_1200,iECP_1309.ECP_1085,iECS88_1305.ECS88_1107,iECSE_1348.ECSE_1157,iECSF_1327.ECSF_0992,iECUMN_1333.ECUMN_1268,iECW_1372.ECW_m1201,iEKO11_1354.EKO11_2741,iETEC_1333.ETEC_1158,iEcDH1_1363.EcDH1_2554,iEcE24377_1341.EcE24377A_1214,iEcHS_1320.EcHS_A1215,iEcSMS35_1347.EcSMS35_2034,iEcolC_1368.EcolC_2508,iG2583_1286.G2583_1353,iJN746.PP_1914,iJO1366.b1093,iJR904.b1093,iSBO_1134.SBO_1970,iSFV_1184.SFV_1113,iSF_1195.SF1097,iSFxv_1172.SFxv_1249,iSSON_1240.SSON_1113,iS_1188.S1177,iSbBS512_1146.SbBS512_E2231,iUMN146_1321.UM146_11860,iUMNK88_1353.UMNK88_1363,iUTI89_1310.UTI89_C1218,iWFL_1372.ECW_m1201,iY75_1357.Y75_RS05710 adh_short_C2 HKD3_k127_967614_2 204669.Acid345_4573 2.724e-98 332.0 COG0331@1|root,COG0331@2|Bacteria,3Y2TE@57723|Acidobacteria,2JI6J@204432|Acidobacteriia 204432|Acidobacteriia I malonyl CoA-acyl carrier protein transacylase - - 2.3.1.39 ko:K00645 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 M00082 R01626,R11671 RC00004,RC00039,RC02727 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Acyl_transf_1 HKD3_k127_967614_3 243231.GSU1600 8.781e-89 303.0 COG0416@1|root,COG0416@2|Bacteria,1MVM3@1224|Proteobacteria,42NRV@68525|delta/epsilon subdivisions,2WIXX@28221|Deltaproteobacteria,43T0B@69541|Desulfuromonadales 28221|Deltaproteobacteria I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA plsX - 2.3.1.15 ko:K03621 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R00851,R09380 RC00004,RC00039,RC00041 ko00000,ko00001,ko00002,ko01000,ko01004 - - - FA_synthesis HKD3_k127_967614_10 1382359.JIAL01000001_gene525 1.761e-20 95.0 COG0333@1|root,COG0333@2|Bacteria,3Y5HY@57723|Acidobacteria,2JJZ9@204432|Acidobacteriia 204432|Acidobacteriia J Ribosomal L32p protein family rpmF - - ko:K02911 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011,ko03029 - - - Ribosomal_L32p HKD3_k127_967614_9 1123371.ATXH01000038_gene1358 2.39e-25 111.0 COG1399@1|root,COG1399@2|Bacteria,2GHV8@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria S Uncharacterized ACR, COG1399 - - - ko:K07040 - - - - ko00000 - - - DUF177 HKD3_k127_967614_1 289376.THEYE_A0539 1.074e-111 384.0 COG0232@1|root,COG0232@2|Bacteria 2|Bacteria F Belongs to the dGTPase family. Type 2 subfamily dgt GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 ko:K01129 ko00230,map00230 - R01856 RC00017 ko00000,ko00001,ko01000 - - - HD,HD_assoc HKD3_k127_967614_0 234267.Acid_6503 3.305e-139 455.0 COG1015@1|root,COG1015@2|Bacteria,3Y6GB@57723|Acidobacteria 57723|Acidobacteria G Metalloenzyme superfamily - - 5.4.2.7 ko:K01839 ko00030,ko00230,map00030,map00230 - R01057,R02749 RC00408 ko00000,ko00001,ko01000 - - - Metalloenzyme HKD3_k127_967614_11 246194.CHY_1393 2.633e-13 73.0 COG1923@1|root,COG1923@2|Bacteria,1VEGI@1239|Firmicutes,24QIM@186801|Clostridia,42GUT@68295|Thermoanaerobacterales 186801|Clostridia J RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs hfq - - ko:K03666 ko02024,ko03018,ko05111,map02024,map03018,map05111 - - - ko00000,ko00001,ko03019,ko03036 - - - Hfq HKD3_k127_967614_6 234267.Acid_1297 2.369e-65 245.0 COG0324@1|root,COG0324@2|Bacteria,3Y3CE@57723|Acidobacteria 57723|Acidobacteria J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) miaA - 2.5.1.75 ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 - R01122 RC02820 ko00000,ko00001,ko01000,ko01006,ko03016 - - - IPPT HKD3_k127_967614_12 1267534.KB906754_gene3712 1.214e-06 60.0 COG0810@1|root,COG0810@2|Bacteria,3Y3T5@57723|Acidobacteria,2JHKT@204432|Acidobacteriia 204432|Acidobacteriia M TonB C terminal - - - - - - - - - - - - TonB_2,TonB_C HKD3_k127_967614_7 1089550.ATTH01000001_gene1686 1.143e-54 209.0 COG0500@1|root,COG2226@2|Bacteria,4NEDR@976|Bacteroidetes,1FJ8B@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) menG - 2.1.1.163,2.1.1.201 ko:K03183 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116,M00117 R04990,R04993,R06859,R08774,R09736 RC00003,RC01253,RC01662 ko00000,ko00001,ko00002,ko01000 - - - Ubie_methyltran HKD3_k127_967614_8 1121091.AUMP01000003_gene2787 2.337e-48 181.0 COG0163@1|root,COG0163@2|Bacteria,1V3JV@1239|Firmicutes,4HFZX@91061|Bacilli 91061|Bacilli H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN ubiX - 2.5.1.129 ko:K03186 ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220 M00117 R01238,R02952,R03367,R04985,R04986,R11225 RC00391,RC00814,RC03392 ko00000,ko00001,ko00002,ko01000 - - - Flavoprotein HKD3_k127_967614_5 234267.Acid_1310 1.477e-77 269.0 COG0382@1|root,COG0382@2|Bacteria,3Y3CW@57723|Acidobacteria 57723|Acidobacteria H PFAM UbiA prenyltransferase - - 2.5.1.39 ko:K03179 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00117 R05000,R05615 RC00209,RC02895 ko00000,ko00001,ko00002,ko01000,ko01006 - - - UbiA HKD3_k127_970758_1 861299.J421_6019 6.668e-65 226.0 COG0531@1|root,COG0531@2|Bacteria,1ZSQW@142182|Gemmatimonadetes 2|Bacteria E Amino acid permease frlA GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006040,GO:0006082,GO:0006520,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0009056,GO:0009063,GO:0009987,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0016054,GO:0019752,GO:0022804,GO:0022857,GO:0030389,GO:0030392,GO:0030393,GO:0031224,GO:0031226,GO:0034220,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044425,GO:0044459,GO:0044464,GO:0046348,GO:0046395,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0098656,GO:1901135,GO:1901136,GO:1901281,GO:1901564,GO:1901565,GO:1901575,GO:1902475,GO:1903825,GO:1905039 - ko:K03294,ko:K19540 - - - - ko00000,ko02000 2.A.3.2,2.A.3.8.17 - iAF1260.b3370,iB21_1397.B21_03173,iBWG_1329.BWG_3062,iEC042_1314.EC042_3632,iEC55989_1330.EC55989_3776,iECBD_1354.ECBD_0378,iECB_1328.ECB_03221,iECDH10B_1368.ECDH10B_3546,iECDH1ME8569_1439.ECDH1ME8569_3250,iECD_1391.ECD_03221,iECIAI1_1343.ECIAI1_3509,iECO111_1330.ECO111_4180,iECO26_1355.ECO26_4459,iETEC_1333.ETEC_3621,iEcDH1_1363.EcDH1_0342,iJO1366.b3370,iSSON_1240.SSON_3502,iUMNK88_1353.UMNK88_4136,iY75_1357.Y75_RS20365 AA_permease_2 HKD3_k127_970758_0 1047013.AQSP01000108_gene2058 8.533e-136 459.0 COG2091@1|root,COG2091@2|Bacteria,2NQGR@2323|unclassified Bacteria 2|Bacteria H lysine biosynthetic process via aminoadipic acid - - - - - - - - - - - - CBM9_1 ## 3168 queries scanned ## Total time (seconds): 18.495767831802368 ## Rate: 171.28 q/s