## Sat Nov 16 01:21:53 2024 ## emapper-2.1.12 ## /data/home/zkh/miniconda3/envs/eggnog-mapper/bin/emapper.py -i /data/home/zkh/binning/bin_4635/bin/bin10/HSJS_2_bin.36.fa -m mmseqs --itype genome -o HSJS_2_bin.36 --output_dir /data/home/zkh/meta_analysis/eggnog-mapper/4635/HSJS_2_bin.36 --cpu 28 ## #query seed_ortholog evalue score eggNOG_OGs max_annot_lvl COG_category Description Preferred_name GOs EC KEGG_ko KEGG_Pathway KEGG_Module KEGG_Reaction KEGG_rclass BRITE KEGG_TC CAZy BiGG_Reaction PFAMs HSJS2_k127_1005869_0 1379270.AUXF01000005_gene804 4.144e-65 237.0 COG1208@1|root,COG1208@2|Bacteria,1ZSVN@142182|Gemmatimonadetes 142182|Gemmatimonadetes JM Sugar nucleotidyl transferase - - - - - - - - - - - - NTP_transf_4 HSJS2_k127_1005869_1 861299.J421_3169 1.77e-61 223.0 COG1235@1|root,COG1235@2|Bacteria,1ZTN8@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Metallo-beta-lactamase superfamily - - - - - - - - - - - - Lactamase_B_2 HSJS2_k127_1005869_2 311402.Avi_2518 1.961e-48 184.0 COG0750@1|root,COG0750@2|Bacteria,1MU91@1224|Proteobacteria,2TQXJ@28211|Alphaproteobacteria,4BAI7@82115|Rhizobiaceae 28211|Alphaproteobacteria M zinc metalloprotease rseP - - ko:K11749 ko02024,ko04112,map02024,map04112 - - - ko00000,ko00001,ko01000,ko01002 - - - PDZ_2,Peptidase_M50 HSJS2_k127_1015340_3 861299.J421_3910 1.274e-13 84.0 COG1664@1|root,COG1664@2|Bacteria 2|Bacteria M Polymer-forming cytoskeletal - - - - - - - - - - - - Bactofilin HSJS2_k127_1015340_2 861299.J421_3911 2.775e-33 140.0 COG4758@1|root,COG4758@2|Bacteria 2|Bacteria KT membrane yvqF - - ko:K11622 ko02020,map02020 - - - ko00000,ko00001 - - - DUF2154 HSJS2_k127_1015340_1 861299.J421_3913 3.134e-56 206.0 COG1912@1|root,COG1912@2|Bacteria,1ZTIH@142182|Gemmatimonadetes 142182|Gemmatimonadetes S S-adenosyl-l-methionine hydroxide adenosyltransferase - - - ko:K22205 - - - - ko00000,ko01000 - - - SAM_adeno_trans HSJS2_k127_1015340_0 309801.trd_0526 1.094e-88 301.0 COG0489@1|root,COG0489@2|Bacteria,2G60P@200795|Chloroflexi,27XJW@189775|Thermomicrobia 189775|Thermomicrobia D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP - - - ko:K03593 - - - - ko00000,ko03029,ko03036 - - - FeS_assembly_P,ParA HSJS2_k127_102494_1 1230476.C207_05878 3.248e-05 55.0 COG0457@1|root,COG0457@2|Bacteria,1R8QI@1224|Proteobacteria,2U3CP@28211|Alphaproteobacteria,3JUFE@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria S Tetratricopeptide repeat - - - - - - - - - - - - TPR_16,TPR_19 HSJS2_k127_102494_0 155864.EDL933_0764 2.151e-05 56.0 COG0745@1|root,COG0745@2|Bacteria,1MWZ5@1224|Proteobacteria,1RNY2@1236|Gammaproteobacteria,3XP6Y@561|Escherichia 1236|Gammaproteobacteria K KDP operon transcriptional regulatory protein KdpE kdpE GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0001121,GO:0001130,GO:0001131,GO:0001140,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - ko:K07667 ko02020,ko02024,map02020,map02024 M00454 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C HSJS2_k127_1026600_0 232721.Ajs_2164 1.839e-152 490.0 COG0574@1|root,COG1080@1|root,COG0574@2|Bacteria,COG1080@2|Bacteria,1MU0R@1224|Proteobacteria,2VHNJ@28216|Betaproteobacteria,4AGI0@80864|Comamonadaceae 28216|Betaproteobacteria H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate - - 2.7.9.2 ko:K01007 ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200 M00173,M00374 R00199 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000 - - - PEP-utilizers,PEP-utilizers_C,PPDK_N HSJS2_k127_1034194_0 1045855.DSC_15610 2.663e-70 255.0 COG2173@1|root,COG2173@2|Bacteria,1RENK@1224|Proteobacteria,1S3SJ@1236|Gammaproteobacteria,1X64M@135614|Xanthomonadales 135614|Xanthomonadales M Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide ddpX - 3.4.13.22 ko:K08641 ko01502,ko02020,map01502,map02020 M00651 - - ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504 - - - Peptidase_M15 HSJS2_k127_1034194_1 1267535.KB906767_gene4248 8.028e-22 104.0 COG2318@1|root,COG2318@2|Bacteria,3Y82J@57723|Acidobacteria,2JN4W@204432|Acidobacteriia 204432|Acidobacteriia S Protein of unknown function (DUF664) - - - - - - - - - - - - DinB_2 HSJS2_k127_1035917_2 1121920.AUAU01000019_gene2602 2.605e-39 162.0 COG1477@1|root,COG1477@2|Bacteria,3Y4B0@57723|Acidobacteria 57723|Acidobacteria H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein - - 2.7.1.180 ko:K03734 - - - - ko00000,ko01000 - - - ApbE HSJS2_k127_1035917_0 861299.J421_3861 7.634e-88 299.0 COG0110@1|root,COG0110@2|Bacteria 2|Bacteria S O-acyltransferase activity - - - - - - - - - - - - Hexapep,Hexapep_2 HSJS2_k127_1035917_1 861299.J421_3591 8.718e-53 206.0 COG1028@1|root,COG1028@2|Bacteria,1ZTNC@142182|Gemmatimonadetes 142182|Gemmatimonadetes IQ KR domain - - 1.5.1.33 ko:K03793 - - - - ko00000,ko01000 - - - adh_short_C2 HSJS2_k127_1035917_3 1238182.C882_1436 9.281e-16 83.0 COG4191@1|root,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TZQK@28211|Alphaproteobacteria,2JZ4N@204441|Rhodospirillales 204441|Rhodospirillales T Histidine Phosphotransfer domain - - - - - - - - - - - - HAMP,HATPase_c,HisKA,Hpt,Response_reg HSJS2_k127_1036271_4 1283300.ATXB01000001_gene1438 4.739e-06 52.0 COG3832@1|root,COG3832@2|Bacteria,1QSD0@1224|Proteobacteria,1SQHN@1236|Gammaproteobacteria,1XGHU@135618|Methylococcales 135618|Methylococcales S Polyketide cyclase / dehydrase and lipid transport - - - - - - - - - - - - Polyketide_cyc2 HSJS2_k127_1036271_5 765910.MARPU_05375 0.0001931 54.0 COG0457@1|root,COG3063@1|root,COG0457@2|Bacteria,COG3063@2|Bacteria,1MXMD@1224|Proteobacteria,1RSI5@1236|Gammaproteobacteria,1WX0E@135613|Chromatiales 135613|Chromatiales U PEP-CTERM system TPR-repeat lipoprotein - - - - - - - - - - - - TPR_16,TPR_19,TPR_4,TPR_8 HSJS2_k127_1036271_2 394221.Mmar10_1457 1.825e-10 74.0 COG5616@1|root,COG5616@2|Bacteria,1NSKC@1224|Proteobacteria,2TWZ1@28211|Alphaproteobacteria,44159@69657|Hyphomonadaceae 28211|Alphaproteobacteria K cAMP biosynthetic process - - - - - - - - - - - - Guanylate_cyc,Trans_reg_C HSJS2_k127_1036271_3 479433.Caci_1944 9.9e-08 62.0 2DG6U@1|root,2ZURF@2|Bacteria,2HCGM@201174|Actinobacteria 201174|Actinobacteria - - - - - - - - - - - - - - - HSJS2_k127_1036271_1 519989.ECTPHS_02766 3.868e-14 83.0 COG3137@1|root,COG3137@2|Bacteria,1MWI4@1224|Proteobacteria,1RN4J@1236|Gammaproteobacteria,1WZ1V@135613|Chromatiales 135613|Chromatiales M Protein of unknown function, DUF481 - - - ko:K07283 - - - - ko00000 - - - DUF481 HSJS2_k127_1036271_0 1121930.AQXG01000001_gene1300 1.739e-176 569.0 COG2931@1|root,COG2931@2|Bacteria,4NFV5@976|Bacteroidetes,1IYME@117747|Sphingobacteriia 976|Bacteroidetes Q Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - - - - - - - - - - VCBS HSJS2_k127_1040526_2 1439940.BAY1663_03096 4.226e-58 214.0 COG1597@1|root,COG1597@2|Bacteria,1MY37@1224|Proteobacteria,1RMX9@1236|Gammaproteobacteria 1236|Gammaproteobacteria I the in vivo substrate is yegS GO:0001727,GO:0003674,GO:0003824,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0030258,GO:0044237,GO:0044238,GO:0044255,GO:0046834,GO:0071704 - - - - - - - - - - DAGK_cat HSJS2_k127_1040526_0 585199.HMPREF0577_1839 2.369e-135 441.0 COG1740@1|root,COG1740@2|Bacteria,2GKF2@201174|Actinobacteria 201174|Actinobacteria C Small subunit hoxK - 1.12.99.6 ko:K06282 ko00633,ko01120,map00633,map01120 - R08034 RC00250 ko00000,ko00001,ko01000 - - - NiFe_hyd_SSU_C,Oxidored_q6 HSJS2_k127_1040526_1 404380.Gbem_1368 2.938e-65 226.0 COG0374@1|root,COG0374@2|Bacteria,1MWFJ@1224|Proteobacteria,42M4S@68525|delta/epsilon subdivisions,2WJQS@28221|Deltaproteobacteria 28221|Deltaproteobacteria C Belongs to the NiFe NiFeSe hydrogenase large subunit family - - 1.12.99.6 ko:K06281 ko00633,ko01120,map00633,map01120 - R08034 RC00250 ko00000,ko00001,ko01000 - - - NiFeSe_Hases HSJS2_k127_1040731_0 1033802.SSPSH_000928 2.24e-157 517.0 COG0060@1|root,COG0060@2|Bacteria,1MVBQ@1224|Proteobacteria,1RMTF@1236|Gammaproteobacteria 1236|Gammaproteobacteria J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) ileS - 6.1.1.5 ko:K01870 ko00970,map00970 M00359,M00360 R03656 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,tRNA-synt_1 HSJS2_k127_1040731_1 1379270.AUXF01000005_gene662 1.277e-48 176.0 COG1734@1|root,COG1734@2|Bacteria,1ZTP9@142182|Gemmatimonadetes 142182|Gemmatimonadetes T Prokaryotic dksA/traR C4-type zinc finger - - - - - - - - - - - - zf-dskA_traR HSJS2_k127_1040731_3 1379270.AUXF01000005_gene663 2.479e-34 138.0 COG0597@1|root,COG0597@2|Bacteria,1ZTWA@142182|Gemmatimonadetes 142182|Gemmatimonadetes M This protein specifically catalyzes the removal of signal peptides from prolipoproteins - - 3.4.23.36 ko:K03101 ko03060,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_A8 HSJS2_k127_1040731_2 1379270.AUXF01000005_gene665 4.466e-39 153.0 COG0564@1|root,COG0564@2|Bacteria,1ZSXN@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Responsible for synthesis of pseudouridine from uracil - - 5.4.99.23 ko:K06180 - - - - ko00000,ko01000,ko03009 - - - PseudoU_synth_2,S4 HSJS2_k127_1044363_1 861299.J421_3171 5.09e-85 295.0 COG0836@1|root,COG0836@2|Bacteria,1ZT5Z@142182|Gemmatimonadetes 142182|Gemmatimonadetes M Nucleotidyl transferase - - 2.7.7.13 ko:K00971 ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110 M00114,M00361,M00362 R00885 RC00002 ko00000,ko00001,ko00002,ko01000 - - - NTP_transferase HSJS2_k127_1044363_0 1125863.JAFN01000001_gene394 3.299e-147 483.0 COG0172@1|root,COG0172@2|Bacteria,1MUJF@1224|Proteobacteria,42M7H@68525|delta/epsilon subdivisions,2WIT7@28221|Deltaproteobacteria 28221|Deltaproteobacteria J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) serS - 6.1.1.11 ko:K01875 ko00970,map00970 M00359,M00360 R03662,R08218 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - iAF987.Gmet_3528 Seryl_tRNA_N,tRNA-synt_2b HSJS2_k127_1044363_3 1379270.AUXF01000005_gene810 1.423e-73 262.0 COG5000@1|root,COG5000@2|Bacteria,1ZSKZ@142182|Gemmatimonadetes 142182|Gemmatimonadetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c HSJS2_k127_1044363_2 1089544.KB912942_gene5403 7.398e-75 260.0 COG0210@1|root,COG0210@2|Bacteria,2GISS@201174|Actinobacteria,4DZQT@85010|Pseudonocardiales 201174|Actinobacteria L ATP-dependent DNA helicase pcrA GO:0000018,GO:0000166,GO:0000287,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0009892,GO:0009987,GO:0010605,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0030312,GO:0030554,GO:0031323,GO:0031324,GO:0032392,GO:0032508,GO:0032552,GO:0032554,GO:0032558,GO:0032564,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0036094,GO:0040007,GO:0042623,GO:0043138,GO:0043140,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0045910,GO:0045934,GO:0046483,GO:0046872,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051276,GO:0051716,GO:0060255,GO:0060542,GO:0060543,GO:0065007,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - UvrD-helicase,UvrD_C HSJS2_k127_1051663_0 861299.J421_2825 9.48e-214 685.0 COG1198@1|root,COG1198@2|Bacteria,1ZTE9@142182|Gemmatimonadetes 142182|Gemmatimonadetes L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA priA - - ko:K04066 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C HSJS2_k127_1051663_1 1379270.AUXF01000004_gene3235 3.92e-68 260.0 COG1403@1|root,COG1403@2|Bacteria,1ZTF1@142182|Gemmatimonadetes 142182|Gemmatimonadetes L HNH nucleases - - - - - - - - - - - - HNH_5 HSJS2_k127_1051663_6 1047013.AQSP01000099_gene1496 2.021e-12 73.0 COG1826@1|root,COG1826@2|Bacteria,2NQ3N@2323|unclassified Bacteria 2|Bacteria U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system tatA - - ko:K03116,ko:K03117,ko:K03646 ko03060,ko03070,map03060,map03070 M00336 - - ko00000,ko00001,ko00002,ko02000,ko02044 2.A.64,2.C.1.2 - - MttA_Hcf106 HSJS2_k127_1051663_5 583355.Caka_1655 8.207e-13 80.0 COG3568@1|root,COG3568@2|Bacteria,46V1K@74201|Verrucomicrobia,3K764@414999|Opitutae 414999|Opitutae L Endonuclease/Exonuclease/phosphatase family - - - - - - - - - - - - Exo_endo_phos HSJS2_k127_1051663_3 1005999.GLGR_1794 7.021e-38 155.0 COG4589@1|root,COG4589@2|Bacteria,1MX58@1224|Proteobacteria,1RRAG@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Phosphatidate cytidylyltransferase ynbB GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009273,GO:0009987,GO:0016020,GO:0042546,GO:0044085,GO:0044464,GO:0071554,GO:0071840,GO:0071944 2.7.7.41 ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 M00093 R01799 RC00002 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_1 HSJS2_k127_1051663_4 243090.RB11253 2.484e-23 108.0 COG0558@1|root,COG0558@2|Bacteria 2|Bacteria I Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - 2.7.8.5 ko:K00995 ko00564,ko01100,map00564,map01100 - R01801 RC00002,RC00017,RC02795 ko00000,ko00001,ko01000 - - - CDP-OH_P_transf HSJS2_k127_1051663_2 246197.MXAN_4334 2.465e-38 163.0 COG3386@1|root,COG3386@2|Bacteria,1RE3R@1224|Proteobacteria,42SFJ@68525|delta/epsilon subdivisions,2WPY7@28221|Deltaproteobacteria,2YV98@29|Myxococcales 28221|Deltaproteobacteria G PFAM SMP-30 Gluconolaconase - - - - - - - - - - - - - HSJS2_k127_1055303_2 1379270.AUXF01000005_gene457 1.713e-98 328.0 COG1136@1|root,COG1136@2|Bacteria,1ZSKH@142182|Gemmatimonadetes 142182|Gemmatimonadetes V membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides macB - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HSJS2_k127_1055303_5 379066.GAU_1145 4.541e-85 297.0 COG0577@1|root,COG0577@2|Bacteria,1ZUU2@142182|Gemmatimonadetes 142182|Gemmatimonadetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD HSJS2_k127_1055303_6 861299.J421_2900 8.657e-82 287.0 COG0577@1|root,COG0577@2|Bacteria,1ZUN6@142182|Gemmatimonadetes 142182|Gemmatimonadetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD HSJS2_k127_1055303_3 379066.GAU_1135 1.485e-86 310.0 COG2120@1|root,COG2120@2|Bacteria,1ZTDK@142182|Gemmatimonadetes 142182|Gemmatimonadetes S GlcNAc-PI de-N-acetylase - - - ko:K01463 - - - - ko00000,ko01000 - - - PIG-L HSJS2_k127_1055303_4 861299.J421_2892 2.775e-85 297.0 COG1104@1|root,COG1104@2|Bacteria,1ZSXD@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Aminotransferase class-V - - 2.8.1.7 ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 - R07460,R11528,R11529 RC01789,RC02313 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 - - - Aminotran_5 HSJS2_k127_1055303_1 379066.GAU_1130 5.041e-114 385.0 COG0482@1|root,COG0482@2|Bacteria,1ZST7@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 mnmA - 2.8.1.13 ko:K00566 ko04122,map04122 - R08700 RC02313,RC02315 ko00000,ko00001,ko01000,ko03016 - - - tRNA_Me_trans HSJS2_k127_1055303_0 861299.J421_2890 2.555e-121 399.0 COG0484@1|root,COG0484@2|Bacteria,1ZT5T@142182|Gemmatimonadetes 142182|Gemmatimonadetes O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins - - - ko:K03686 - - - - ko00000,ko03029,ko03110 - - - DnaJ,DnaJ_C,DnaJ_CXXCXGXG HSJS2_k127_1055303_10 638302.HMPREF0908_1797 9.46e-24 109.0 COG0576@1|root,COG0576@2|Bacteria,1V6G2@1239|Firmicutes,4H4K0@909932|Negativicutes 909932|Negativicutes O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ grpE - - ko:K03687 - - - - ko00000,ko03029,ko03110 - - - GrpE HSJS2_k127_1055303_7 1408254.T458_18130 1.437e-44 174.0 COG2267@1|root,COG2267@2|Bacteria,1UZ5S@1239|Firmicutes,4HEHP@91061|Bacilli,275E1@186822|Paenibacillaceae 91061|Bacilli I Serine aminopeptidase, S33 - - 3.1.1.5 ko:K01048 ko00564,map00564 - - - ko00000,ko00001,ko01000 - - - Hydrolase_4 HSJS2_k127_1055303_8 69042.WH5701_01460 2.12e-36 143.0 COG1058@1|root,COG1546@1|root,COG1058@2|Bacteria,COG1546@2|Bacteria,1G0IZ@1117|Cyanobacteria,1GYEI@1129|Synechococcus 1117|Cyanobacteria S Belongs to the CinA family cinA - 3.5.1.42 ko:K03742 ko00760,map00760 - R02322 RC00100 ko00000,ko00001,ko01000 - - - CinA,MoCF_biosynth HSJS2_k127_1055303_9 1379270.AUXF01000005_gene391 6.546e-34 143.0 COG0558@1|root,COG0558@2|Bacteria,1ZSXG@142182|Gemmatimonadetes 142182|Gemmatimonadetes I CDP-alcohol phosphatidyltransferase - - 2.7.8.5 ko:K00995 ko00564,ko01100,map00564,map01100 - R01801 RC00002,RC00017,RC02795 ko00000,ko00001,ko01000 - - - CDP-OH_P_transf HSJS2_k127_1055303_11 869210.Marky_0784 2.839e-19 91.0 COG1100@1|root,COG1100@2|Bacteria,1WJAD@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S PFAM ADP-ribosylation factor family - - - ko:K06883 - - - - ko00000 - - - Arf HSJS2_k127_1058916_0 1047013.AQSP01000079_gene2041 1.037e-114 383.0 COG0841@1|root,COG0841@2|Bacteria,2NQI6@2323|unclassified Bacteria 2|Bacteria V AcrB/AcrD/AcrF family mdtC - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran HSJS2_k127_1058916_3 861299.J421_2904 9.088e-11 76.0 COG1538@1|root,COG1538@2|Bacteria,1ZSMB@142182|Gemmatimonadetes 142182|Gemmatimonadetes MU Outer membrane efflux protein - - - ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 1.B.17,2.A.6.2 - - OEP HSJS2_k127_1058916_2 1047013.AQSP01000079_gene2044 1.079e-54 208.0 COG0845@1|root,COG0845@2|Bacteria,2NR3D@2323|unclassified Bacteria 2|Bacteria M Biotin-lipoyl like - - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 HSJS2_k127_1058916_1 243233.MCA0142 4.44e-114 377.0 COG0387@1|root,COG0387@2|Bacteria,1N1MR@1224|Proteobacteria,1S1GI@1236|Gammaproteobacteria 1236|Gammaproteobacteria P Sodium/calcium exchanger protein - - - ko:K07300 - - - - ko00000,ko02000 2.A.19 - - Na_Ca_ex HSJS2_k127_1067832_3 469383.Cwoe_2550 1.457e-19 90.0 COG0068@1|root,COG0068@2|Bacteria,2GJYF@201174|Actinobacteria 201174|Actinobacteria O Belongs to the carbamoyltransferase HypF family hypF - - ko:K04656 - - - - ko00000 - - - Acylphosphatase,Sua5_yciO_yrdC,zf-HYPF HSJS2_k127_1067832_2 469383.Cwoe_2536 8.519e-32 126.0 COG0298@1|root,COG0298@2|Bacteria,2HRGE@201174|Actinobacteria,4CTFV@84995|Rubrobacteria 84995|Rubrobacteria O HupF/HypC family - - - ko:K04653 - - - - ko00000 - - - HupF_HypC HSJS2_k127_1067832_4 1394178.AWOO02000017_gene6812 1.545e-09 65.0 COG0298@1|root,COG0298@2|Bacteria,2GXP3@201174|Actinobacteria 201174|Actinobacteria O HupF/HypC family - - - ko:K04653 - - - - ko00000 - - - HupF_HypC HSJS2_k127_1067832_0 469383.Cwoe_2538 8.652e-214 668.0 COG0409@1|root,COG0409@2|Bacteria,2HRXM@201174|Actinobacteria,4CU0U@84995|Rubrobacteria 84995|Rubrobacteria O Hydrogenase formation hypA family - - - ko:K04654 - - - - ko00000 - - - HypD HSJS2_k127_1067832_1 469383.Cwoe_2539 5.107e-76 260.0 COG0309@1|root,COG0309@2|Bacteria,2GJ7N@201174|Actinobacteria 201174|Actinobacteria O hydrogenase expression formation protein HypE hypE - - ko:K04655 - - - - ko00000 - - - AIRS,AIRS_C HSJS2_k127_1077040_0 1329516.JPST01000014_gene634 1.118e-178 576.0 COG0188@1|root,COG0188@2|Bacteria,1TP2Z@1239|Firmicutes,4HAHY@91061|Bacilli,27B3B@186824|Thermoactinomycetaceae 91061|Bacilli L DNA Topoisomerase IV gyrA - 5.99.1.3 ko:K02469 - - - - ko00000,ko01000,ko03032,ko03400 - - - DNA_gyraseA_C,DNA_topoisoIV HSJS2_k127_1079245_0 861299.J421_3143 5.005e-141 458.0 COG0044@1|root,COG0044@2|Bacteria,1ZT4U@142182|Gemmatimonadetes 142182|Gemmatimonadetes F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily pyrC - 3.5.2.3 ko:K01465 ko00240,ko01100,map00240,map01100 M00051 R01993 RC00632 ko00000,ko00001,ko00002,ko01000 - - - Amidohydro_1 HSJS2_k127_1079245_3 379066.GAU_1518 3.192e-05 57.0 COG1196@1|root,COG1196@2|Bacteria,1ZU4J@142182|Gemmatimonadetes 142182|Gemmatimonadetes D Zinc finger domain - - - - - - - - - - - - - HSJS2_k127_1079245_2 1158318.ATXC01000001_gene1114 8.589e-09 59.0 COG0268@1|root,COG0268@2|Bacteria 2|Bacteria J rRNA binding rpsT GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02968 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S20p HSJS2_k127_1079245_1 292459.STH1803 1.135e-19 93.0 COG1354@1|root,COG1354@2|Bacteria,1TRW3@1239|Firmicutes,249VW@186801|Clostridia 186801|Clostridia D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves scpA - - ko:K05896 - - - - ko00000,ko03036 - - - SMC_ScpA HSJS2_k127_1095329_11 525146.Ddes_0515 3.937e-24 113.0 COG0750@1|root,COG0750@2|Bacteria,1MU91@1224|Proteobacteria,42NJ0@68525|delta/epsilon subdivisions,2WJ7A@28221|Deltaproteobacteria,2M971@213115|Desulfovibrionales 28221|Deltaproteobacteria M SMART PDZ DHR GLGF domain protein rseP - - ko:K11749 ko02024,ko04112,map02024,map04112 - - - ko00000,ko00001,ko01000,ko01002 - - - PDZ,PDZ_2,Peptidase_M50 HSJS2_k127_1095329_8 1033810.HLPCO_001694 1.857e-41 160.0 COG0454@1|root,COG0456@2|Bacteria 2|Bacteria K acetyltransferase - - - - - - - - - - - - Acetyltransf_1 HSJS2_k127_1095329_9 1415754.JQMK01000007_gene1898 2.999e-38 161.0 COG2199@1|root,COG2199@2|Bacteria,1NV1F@1224|Proteobacteria,1RS44@1236|Gammaproteobacteria,46CHY@72275|Alteromonadaceae 1236|Gammaproteobacteria T PAS fold - - 2.7.7.65 ko:K20960 ko05111,map05111 - - - ko00000,ko00001,ko01000 - - - GGDEF,PAS,PAS_3,PAS_4 HSJS2_k127_1095329_10 1123360.thalar_00960 1.597e-37 149.0 29681@1|root,2ZTI1@2|Bacteria,1RA8W@1224|Proteobacteria,2U6CU@28211|Alphaproteobacteria 28211|Alphaproteobacteria S Peptidase M50B-like - - - - - - - - - - - - Peptidase_M50B HSJS2_k127_1095329_3 1304275.C41B8_10895 1.704e-104 356.0 COG0297@1|root,COG0297@2|Bacteria,1MUGM@1224|Proteobacteria,1RNMP@1236|Gammaproteobacteria 1236|Gammaproteobacteria G Synthesizes alpha-1,4-glucan chains using ADP-glucose glgA - 2.4.1.21 ko:K00703 ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026 M00565 R02421 RC00005 ko00000,ko00001,ko00002,ko01000,ko01003 - GT5 - Glyco_transf_5,Glycos_transf_1 HSJS2_k127_1095329_2 1163617.SCD_n02431 5.967e-124 414.0 COG0448@1|root,COG0448@2|Bacteria,1MVTC@1224|Proteobacteria,2VIP2@28216|Betaproteobacteria 28216|Betaproteobacteria H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans glgC - 2.7.7.27 ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 M00565 R00948 RC00002 ko00000,ko00001,ko00002,ko01000 - - - NTP_transferase HSJS2_k127_1095329_12 272844.PAB0381 7.596e-16 89.0 COG2306@1|root,arCOG05760@2157|Archaea,2XX0W@28890|Euryarchaeota,243ZF@183968|Thermococci 183968|Thermococci S Protein of unknown function (DUF402) - - - ko:K09145 - - - - ko00000 - - - DUF402 HSJS2_k127_1095329_0 1232410.KI421415_gene3026 2.203e-150 501.0 COG1024@1|root,COG1250@1|root,COG1024@2|Bacteria,COG1250@2|Bacteria,1MU9P@1224|Proteobacteria,42MQS@68525|delta/epsilon subdivisions,2X28Y@28221|Deltaproteobacteria,43U5A@69541|Desulfuromonadales 28221|Deltaproteobacteria I 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain - - - - - - - - - - - - 3HCDH,3HCDH_N,ECH_1 HSJS2_k127_1095329_7 880073.Calab_2383 5.723e-43 169.0 COG0739@1|root,COG0739@2|Bacteria,2NPG3@2323|unclassified Bacteria 2|Bacteria M Peptidase family M23 - - - ko:K21471 - - - - ko00000,ko01000,ko01002,ko01011 - - - Peptidase_M23 HSJS2_k127_1095329_1 1297581.H919_10808 2.024e-134 446.0 COG0073@1|root,COG0143@1|root,COG0073@2|Bacteria,COG0143@2|Bacteria,1TPA1@1239|Firmicutes,4H9VC@91061|Bacilli,21W9P@150247|Anoxybacillus 91061|Bacilli J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation metG GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 ko:K01874 ko00450,ko00970,map00450,map00970 M00359,M00360 R03659,R04773 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,tRNA-synt_1g,tRNA_bind HSJS2_k127_1095329_6 861299.J421_2654 2.159e-82 295.0 COG1774@1|root,COG1774@2|Bacteria,1ZTE8@142182|Gemmatimonadetes 142182|Gemmatimonadetes S PSP1 C-terminal conserved region - - - - - - - - - - - - PSP1 HSJS2_k127_1095329_4 429009.Adeg_0438 1.534e-98 333.0 COG0825@1|root,COG0825@2|Bacteria,1UHNS@1239|Firmicutes,25E47@186801|Clostridia,42F9F@68295|Thermoanaerobacterales 186801|Clostridia I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA accA - 2.1.3.15,6.4.1.2 ko:K01962 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04386 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 - - - ACCA HSJS2_k127_1095329_5 1379270.AUXF01000004_gene3141 4.041e-94 321.0 COG0587@1|root,COG0587@2|Bacteria,1ZT8N@142182|Gemmatimonadetes 142182|Gemmatimonadetes L Helix-hairpin-helix motif - - 2.7.7.7 ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_alpha,HHH_6,PHP HSJS2_k127_1098756_1 861299.J421_3392 3.644e-53 200.0 COG0285@1|root,COG0285@2|Bacteria,1ZSRP@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Mur ligase middle domain - - 6.3.2.12,6.3.2.17 ko:K11754 ko00790,ko01100,map00790,map01100 M00126,M00841 R00942,R02237,R04241 RC00064,RC00090,RC00162 ko00000,ko00001,ko00002,ko01000 - - - Mur_ligase_M HSJS2_k127_1098756_3 379066.GAU_3064 1.084e-46 179.0 28NYH@1|root,2ZBVN@2|Bacteria,1ZTSS@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Disulphide isomerase - - - - - - - - - - - - Disulph_isomer HSJS2_k127_1098756_0 861299.J421_3391 1.376e-128 424.0 COG0124@1|root,COG0124@2|Bacteria,1ZSXX@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Histidyl-tRNA synthetase hisS - 6.1.1.21 ko:K01892 ko00970,map00970 M00359,M00360 R03655 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_His HSJS2_k127_1098756_2 861299.J421_3390 5.265e-48 173.0 COG0442@1|root,COG0442@2|Bacteria,1ZT48@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) proS - 6.1.1.15 ko:K01881 ko00970,map00970 M00359,M00360 R03661 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - HGTP_anticodon,ProRS-C_1,tRNA-synt_2b HSJS2_k127_1104772_0 706587.Desti_3137 2.795e-188 600.0 COG1331@1|root,COG1331@2|Bacteria,1MUUT@1224|Proteobacteria,42MP3@68525|delta/epsilon subdivisions,2WJ7Y@28221|Deltaproteobacteria,2MQ5N@213462|Syntrophobacterales 28221|Deltaproteobacteria O Protein of unknown function, DUF255 yyaL - - ko:K06888 - - - - ko00000 - - - GlcNAc_2-epim,Thioredox_DsbH HSJS2_k127_1112756_0 861299.J421_3319 1.012e-118 395.0 COG0452@1|root,COG0452@2|Bacteria,1ZV19@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine - - 4.1.1.36,6.3.2.5 ko:K13038 ko00770,ko01100,map00770,map01100 M00120 R03269,R04231 RC00064,RC00090,RC00822 ko00000,ko00001,ko00002,ko01000 - - - DFP,Flavoprotein HSJS2_k127_1112756_4 861299.J421_3320 2.301e-11 69.0 28VAR@1|root,2ZHDJ@2|Bacteria,1ZU25@142182|Gemmatimonadetes 142182|Gemmatimonadetes K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits rpoZ - - - - - - - - - - - RNA_pol_Rpb6 HSJS2_k127_1112756_3 555079.Toce_1022 1.495e-46 180.0 COG0194@1|root,COG0194@2|Bacteria,1TP0M@1239|Firmicutes,24HEX@186801|Clostridia,42ENR@68295|Thermoanaerobacterales 186801|Clostridia F Essential for recycling GMP and indirectly, cGMP gmk - 2.7.4.8 ko:K00942 ko00230,ko01100,map00230,map01100 M00050 R00332,R02090 RC00002 ko00000,ko00001,ko00002,ko01000 - - - Guanylate_kin HSJS2_k127_1112756_2 861299.J421_3322 5.055e-51 192.0 COG1561@1|root,COG1561@2|Bacteria,1ZT99@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Domain of unknown function (DUF1732) - - - - - - - - - - - - DUF1732,YicC_N HSJS2_k127_1112756_1 1125863.JAFN01000001_gene890 1.673e-91 304.0 COG0538@1|root,COG0538@2|Bacteria,1MW3J@1224|Proteobacteria,42M56@68525|delta/epsilon subdivisions,2WJ8W@28221|Deltaproteobacteria 28221|Deltaproteobacteria C PFAM isocitrate isopropylmalate dehydrogenase icd - 1.1.1.42 ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 M00009,M00010,M00173,M00740 R00267,R00268,R01899 RC00001,RC00084,RC00114,RC00626,RC02801 br01601,ko00000,ko00001,ko00002,ko01000 - - - Iso_dh HSJS2_k127_1122299_0 1379270.AUXF01000005_gene572 1.517e-127 424.0 COG0008@1|root,COG0008@2|Bacteria,1ZSSX@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) gltX - 6.1.1.17 ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 M00121,M00359,M00360 R05578 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 - - - tRNA-synt_1c HSJS2_k127_1122299_1 1292034.OR37_02111 1.939e-20 97.0 COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,2TUX3@28211|Alphaproteobacteria,2KI6F@204458|Caulobacterales 204458|Caulobacterales I Belongs to the thiolase family - - 2.3.1.9 ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 M00088,M00095,M00373,M00374,M00375 R00238,R01177 RC00004,RC00326 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Thiolase_C,Thiolase_N HSJS2_k127_1172552_0 861299.J421_2847 2.953e-201 640.0 COG0209@1|root,COG0209@2|Bacteria,1ZSU9@142182|Gemmatimonadetes 142182|Gemmatimonadetes F Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen - - 1.17.4.1 ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R02017,R02018,R02019,R02024 RC00613 ko00000,ko00001,ko00002,ko01000,ko03400 - - - Ribonuc_red_lgC,Ribonuc_red_lgN HSJS2_k127_1177531_1 472759.Nhal_0414 7.42e-96 332.0 COG2433@1|root,COG2433@2|Bacteria,1QW3W@1224|Proteobacteria,1T2RV@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Pfam Transposase IS66 - - - - - - - - - - - - - HSJS2_k127_1177531_2 671143.DAMO_2903 3.033e-28 123.0 COG4659@1|root,COG4659@2|Bacteria 2|Bacteria C FMN binding rnfG GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - ko:K03612 - - - - ko00000 - - - FMN_bind HSJS2_k127_1177531_3 861299.J421_3920 4.667e-12 70.0 2F9BP@1|root,341NP@2|Bacteria,1ZTX1@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_1177531_0 861299.J421_3918 4.939e-111 364.0 COG0516@1|root,COG0517@1|root,COG0516@2|Bacteria,COG0517@2|Bacteria,1ZTG9@142182|Gemmatimonadetes 142182|Gemmatimonadetes F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth guaB - 1.1.1.205 ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 M00050 R01130,R08240 RC00143,RC02207 ko00000,ko00001,ko00002,ko01000,ko04147 - - - CBS,IMPDH HSJS2_k127_1178176_2 1131269.AQVV01000011_gene2523 1.64e-38 151.0 COG0489@1|root,COG0489@2|Bacteria 2|Bacteria D protein tyrosine kinase activity - - - ko:K03593 - - - - ko00000,ko03029,ko03036 - - - ParA HSJS2_k127_1178176_3 518766.Rmar_1087 3.66e-24 109.0 2DBWZ@1|root,2ZBKJ@2|Bacteria,4NMS8@976|Bacteroidetes,1FK4J@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes S HmuY protein - - - - - - - - - - - - HmuY HSJS2_k127_1178176_1 690850.Desaf_1167 4.882e-138 464.0 COG0475@1|root,COG1226@1|root,COG0475@2|Bacteria,COG1226@2|Bacteria,1MV34@1224|Proteobacteria,42MEM@68525|delta/epsilon subdivisions,2WK23@28221|Deltaproteobacteria,2M809@213115|Desulfovibrionales 28221|Deltaproteobacteria P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family - - - ko:K03455,ko:K11747 - - - - ko00000,ko02000 2.A.37,2.A.37.1.2 - - Na_H_Exchanger,TrkA_C,TrkA_N HSJS2_k127_1178176_0 1379270.AUXF01000003_gene3500 1.036e-183 596.0 COG4108@1|root,COG4108@2|Bacteria,1ZSMR@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP prfC - - ko:K02837 - - - - ko00000,ko03012 - - - GTP_EFTU,RF3_C HSJS2_k127_1187623_0 1380391.JIAS01000015_gene243 6.637e-171 548.0 COG0154@1|root,COG0154@2|Bacteria,1MWWQ@1224|Proteobacteria,2TSN9@28211|Alphaproteobacteria,2JRCA@204441|Rhodospirillales 204441|Rhodospirillales J Amidase - - 3.5.1.4 ko:K01426 ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120 - R02540,R03096,R03180,R03909,R05551,R05590 RC00010,RC00100,RC00950,RC01025 ko00000,ko00001,ko01000 - - - Amidase HSJS2_k127_1192038_3 1082931.KKY_2436 4.809e-13 71.0 2EFVW@1|root,339N3@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HSJS2_k127_1192038_1 313612.L8106_27941 1.061e-34 140.0 COG0432@1|root,COG0432@2|Bacteria,1G61Z@1117|Cyanobacteria,1HBAH@1150|Oscillatoriales 1117|Cyanobacteria S Uncharacterised protein family UPF0047 - - - - - - - - - - - - UPF0047 HSJS2_k127_1192038_0 861299.J421_3762 5.482e-83 291.0 COG0648@1|root,COG0648@2|Bacteria,1ZSY0@142182|Gemmatimonadetes 142182|Gemmatimonadetes L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin nfo - 3.1.21.2 ko:K01151 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - AP_endonuc_2 HSJS2_k127_1192038_2 1500893.JQNB01000001_gene1458 2.849e-20 91.0 COG1972@1|root,COG1972@2|Bacteria,1MXXX@1224|Proteobacteria,1RMBX@1236|Gammaproteobacteria,1X3AE@135614|Xanthomonadales 135614|Xanthomonadales F Na dependent nucleoside transporter yeiM - - ko:K03317 - - - - ko00000 2.A.41 - - Gate,Nucleos_tra2_C,Nucleos_tra2_N HSJS2_k127_1208345_0 264732.Moth_1644 4.116e-244 782.0 COG0013@1|root,COG0013@2|Bacteria,1TPK6@1239|Firmicutes,248M3@186801|Clostridia,42EUK@68295|Thermoanaerobacterales 186801|Clostridia J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain alaS - 6.1.1.7 ko:K01872 ko00970,map00970 M00359,M00360 R03038 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - DHHA1,tRNA-synt_2c,tRNA_SAD HSJS2_k127_1208345_5 1410634.JHVD01000001_gene1590 5.031e-19 94.0 COG2137@1|root,COG2137@2|Bacteria,2GMRF@201174|Actinobacteria 201174|Actinobacteria S regulatory protein RecX recX GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - ko:K03565 - - - - ko00000,ko03400 - - - RecX HSJS2_k127_1208345_2 351607.Acel_1492 3.536e-149 485.0 COG0468@1|root,COG0468@2|Bacteria,2GJ4P@201174|Actinobacteria,4ERDP@85013|Frankiales 201174|Actinobacteria L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage recA GO:0000150,GO:0000166,GO:0000287,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009432,GO:0009605,GO:0009628,GO:0009650,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030145,GO:0030554,GO:0031668,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042148,GO:0042221,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046677,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363 - ko:K03553 ko03440,map03440 M00729 - - ko00000,ko00001,ko00002,ko03400 - - - RecA HSJS2_k127_1208345_1 344747.PM8797T_07207 1.096e-228 736.0 COG0433@1|root,COG0433@2|Bacteria,2IY71@203682|Planctomycetes 203682|Planctomycetes L AAA-like domain - - - - - - - - - - - - DUF853,DUF87,PDDEXK_1 HSJS2_k127_1208345_4 1120956.JHZK01000030_gene13 1.385e-23 103.0 COG3360@1|root,COG3360@2|Bacteria 2|Bacteria P Dodecin - - - ko:K09165 - - - - ko00000 - - - Dodecin HSJS2_k127_1208345_3 309807.SRU_1423 2.142e-88 301.0 COG2008@1|root,COG2008@2|Bacteria,4NEIH@976|Bacteroidetes,1FIQX@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes E Beta-eliminating lyase - - 4.1.2.48 ko:K01620 ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230 - R00751,R06171 RC00312,RC00372 ko00000,ko00001,ko01000 - - - Beta_elim_lyase HSJS2_k127_1230610_3 667014.Thein_2165 1.993e-44 168.0 COG1109@1|root,COG1109@2|Bacteria,2GHQ7@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III - - 5.4.2.2,5.4.2.8 ko:K15778 ko00010,ko00030,ko00051,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 M00114 R00959,R01057,R01818,R08639 RC00408 ko00000,ko00001,ko00002,ko01000 - - - PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV HSJS2_k127_1230610_1 316067.Geob_0475 1.061e-108 375.0 COG1007@1|root,COG1007@2|Bacteria,1MV56@1224|Proteobacteria,42P7Z@68525|delta/epsilon subdivisions,2WK06@28221|Deltaproteobacteria 28221|Deltaproteobacteria C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoN - 1.6.5.3 ko:K00343 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Proton_antipo_M HSJS2_k127_1230610_0 1379698.RBG1_1C00001G1061 8.73e-173 560.0 COG1008@1|root,COG1008@2|Bacteria,2NNQ9@2323|unclassified Bacteria 2|Bacteria C NADH-quinone oxidoreductase, chain M nuoM-1 - 1.6.5.3 ko:K00342 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q5_N,Proton_antipo_M HSJS2_k127_1230610_2 398767.Glov_3127 2.992e-93 317.0 COG1009@1|root,COG1009@2|Bacteria,1MW2M@1224|Proteobacteria,42KZE@68525|delta/epsilon subdivisions,2WIPT@28221|Deltaproteobacteria,43TW3@69541|Desulfuromonadales 28221|Deltaproteobacteria C NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein nuoL-1 - 1.6.5.3 ko:K00341 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Proton_antipo_C,Proton_antipo_M,Proton_antipo_N HSJS2_k127_1238644_2 1430440.MGMSRv2_3937 4.468e-85 291.0 COG0147@1|root,COG0147@2|Bacteria,1MVBJ@1224|Proteobacteria,2TRWB@28211|Alphaproteobacteria,2JPJN@204441|Rhodospirillales 204441|Rhodospirillales EH COG0147 Anthranilate para-aminobenzoate synthases component I pabB - 2.6.1.85 ko:K01665,ko:K13950 ko00790,map00790 - R01716 RC00010,RC01418 ko00000,ko00001,ko01000 - - - Aminotran_4,Anth_synt_I_N,Chorismate_bind,GATase HSJS2_k127_1238644_3 349163.Acry_1233 6.11e-62 233.0 COG0512@1|root,COG0547@1|root,COG0512@2|Bacteria,COG0547@2|Bacteria,1MUPV@1224|Proteobacteria,2TR8S@28211|Alphaproteobacteria,2JQYM@204441|Rhodospirillales 204441|Rhodospirillales E Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) trpD - 2.4.2.18,4.1.3.27 ko:K00766,ko:K13497 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R00985,R00986,R01073 RC00010,RC00440,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 - - - GATase,Glycos_trans_3N,Glycos_transf_3 HSJS2_k127_1238644_0 765910.MARPU_00480 2.312e-124 415.0 COG0606@1|root,COG0606@2|Bacteria,1MU4R@1224|Proteobacteria,1RMB9@1236|Gammaproteobacteria,1WWMF@135613|Chromatiales 135613|Chromatiales O PFAM Magnesium chelatase, ChlI subunit - - - ko:K07391 - - - - ko00000 - - - ChlI,Mg_chelatase,Mg_chelatase_C HSJS2_k127_1238644_1 502025.Hoch_2634 5.677e-92 310.0 COG0778@1|root,COG0778@2|Bacteria,1PG5G@1224|Proteobacteria,431RK@68525|delta/epsilon subdivisions,2WWKP@28221|Deltaproteobacteria 28221|Deltaproteobacteria C Nitroreductase - - - - - - - - - - - - - HSJS2_k127_1238644_4 292459.STH1751 1.261e-17 95.0 COG0697@1|root,COG0697@2|Bacteria,1V3QH@1239|Firmicutes,24I9P@186801|Clostridia 186801|Clostridia EG Permeases of the drug metabolite transporter (DMT) - - - ko:K03298 - - - - ko00000,ko02000 2.A.7.3 - - EamA HSJS2_k127_1253730_14 580331.Thit_1005 1.611e-09 63.0 COG0632@1|root,COG0632@2|Bacteria,1V3KF@1239|Firmicutes,24JKV@186801|Clostridia,42G9A@68295|Thermoanaerobacterales 186801|Clostridia L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB ruvA - 3.6.4.12 ko:K03550 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - HHH_5,RuvA_C,RuvA_N HSJS2_k127_1253730_0 1379270.AUXF01000004_gene3254 1.641e-145 468.0 COG2255@1|root,COG2255@2|Bacteria,1ZT9W@142182|Gemmatimonadetes 142182|Gemmatimonadetes L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing ruvB - 3.6.4.12 ko:K03551 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - RuvB_C,RuvB_N HSJS2_k127_1253730_2 1379270.AUXF01000004_gene3256 1.217e-118 392.0 COG0809@1|root,COG0809@2|Bacteria,1ZSV2@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) queA - 2.4.99.17 ko:K07568 - - - - ko00000,ko01000,ko03016 - - - Queuosine_synth HSJS2_k127_1253730_1 500633.CLOHIR_00908 1.937e-125 415.0 COG0343@1|root,COG0343@2|Bacteria,1TNZ4@1239|Firmicutes,247NJ@186801|Clostridia,25QE3@186804|Peptostreptococcaceae 186801|Clostridia F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) tgt - 2.4.2.29 ko:K00773 - - R03789,R10209 RC00063 ko00000,ko01000,ko03016 - - - TGT HSJS2_k127_1253730_11 1120792.JAFV01000001_gene497 1.345e-19 91.0 COG1862@1|root,COG1862@2|Bacteria,1MZT2@1224|Proteobacteria,2UBZ6@28211|Alphaproteobacteria,36YT3@31993|Methylocystaceae 28211|Alphaproteobacteria U Preprotein translocase subunit yajC - - ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 - - YajC HSJS2_k127_1253730_9 1268635.Loa_00599 1.543e-43 166.0 COG0242@1|root,COG0242@2|Bacteria,1RA2P@1224|Proteobacteria,1S247@1236|Gammaproteobacteria,1JC8J@118969|Legionellales 118969|Legionellales J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions def GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 ko:K01462 - - - - ko00000,ko01000 - - - Pep_deformylase HSJS2_k127_1253730_6 477974.Daud_1592 2.136e-76 267.0 COG0223@1|root,COG0223@2|Bacteria,1TQ32@1239|Firmicutes,248ED@186801|Clostridia,260EN@186807|Peptococcaceae 186801|Clostridia J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus fmt - 2.1.2.9 ko:K00604 ko00670,ko00970,map00670,map00970 - R03940 RC00026,RC00165 ko00000,ko00001,ko01000 - - - Formyl_trans_C,Formyl_trans_N HSJS2_k127_1253730_10 479434.Sthe_1493 1.529e-33 138.0 COG0352@1|root,COG0352@2|Bacteria,2G9BW@200795|Chloroflexi,27YDG@189775|Thermomicrobia 189775|Thermomicrobia H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) - - 2.5.1.3 ko:K00788 ko00730,ko01100,map00730,map01100 M00127 R03223,R10712 RC00224,RC03255,RC03397 ko00000,ko00001,ko00002,ko01000 - - - TMP-TENI HSJS2_k127_1253730_13 287.DR97_3347 6.419e-14 75.0 COG2104@1|root,COG2104@2|Bacteria,1N8P3@1224|Proteobacteria,1SCZM@1236|Gammaproteobacteria,1YKN9@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria H ThiS family thiS - - ko:K03154 ko04122,map04122 - - - ko00000,ko00001 - - - ThiS HSJS2_k127_1253730_3 316067.Geob_1587 1.828e-93 317.0 COG2022@1|root,COG2022@2|Bacteria,1N0N5@1224|Proteobacteria,42MNC@68525|delta/epsilon subdivisions,2WIUI@28221|Deltaproteobacteria,43TNT@69541|Desulfuromonadales 28221|Deltaproteobacteria H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S thiG GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 ko:K03149 ko00730,ko01100,map00730,map01100 - R10247 RC03096,RC03097,RC03461 ko00000,ko00001,ko01000 - - - ThiG HSJS2_k127_1253730_7 861299.J421_2565 3.153e-66 251.0 COG0144@1|root,COG0781@1|root,COG0144@2|Bacteria,COG0781@2|Bacteria,1ZTGM@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA - - 2.1.1.176 ko:K03500 - - - - ko00000,ko01000,ko03009 - - - Methyltr_RsmB-F,NusB HSJS2_k127_1253730_12 390989.JOEG01000021_gene2675 1.554e-15 88.0 COG0515@1|root,COG2815@1|root,COG0515@2|Bacteria,COG2815@2|Bacteria,2GJ1J@201174|Actinobacteria,4D8KT@85008|Micromonosporales 201174|Actinobacteria KLT serine threonine protein kinase pknL GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018107,GO:0018193,GO:0018210,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0036211,GO:0042304,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 2.7.11.1 ko:K08884,ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PASTA,Pkinase HSJS2_k127_1253730_15 385682.AFSL01000019_gene2288 4.892e-09 69.0 COG4856@1|root,COG4856@2|Bacteria,4NHJQ@976|Bacteroidetes,2FM3I@200643|Bacteroidia,3XJ50@558415|Marinilabiliaceae 976|Bacteroidetes S YbbR-like protein - - - - - - - - - - - - YbbR HSJS2_k127_1253730_4 861299.J421_2560 1.447e-91 324.0 COG0533@1|root,COG0533@2|Bacteria,1ZT0P@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction tsaD - 2.3.1.234 ko:K01409 - - R10648 RC00070,RC00416 ko00000,ko01000,ko03016 - - - Peptidase_M22 HSJS2_k127_1253730_8 861299.J421_2559 7.351e-62 231.0 COG0682@1|root,COG0682@2|Bacteria,1ZSYY@142182|Gemmatimonadetes 142182|Gemmatimonadetes M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins lgt - - ko:K13292 - - - - ko00000,ko01000 - - - LGT HSJS2_k127_1253730_5 861299.J421_2338 1.229e-80 301.0 COG4775@1|root,COG4775@2|Bacteria,1ZSY7@142182|Gemmatimonadetes 2|Bacteria M Surface antigen - - - ko:K07277,ko:K07278 - - - - ko00000,ko02000,ko03029 1.B.33,1.B.33.2.4 - - Bac_surface_Ag,CarboxypepD_reg,Laminin_G_3,POTRA HSJS2_k127_1260324_3 1143323.M787_0053 1.288e-08 66.0 2DM90@1|root,327AV@2|Bacteria,2JGUS@204428|Chlamydiae 204428|Chlamydiae S Protein of unknown function (DUF1207) CP_0263 - - - - - - - - - - - DUF1207 HSJS2_k127_1260324_0 519442.Huta_1538 5.882e-39 153.0 COG1522@1|root,arCOG01580@2157|Archaea,2XWJA@28890|Euryarchaeota,23V54@183963|Halobacteria 183963|Halobacteria K COG1522 Transcriptional regulators asnC1 - - - - - - - - - - - AsnC_trans_reg,HTH_24 HSJS2_k127_1260324_2 639030.JHVA01000001_gene1847 5.6e-14 82.0 COG1413@1|root,COG1413@2|Bacteria,3Y76M@57723|Acidobacteria 57723|Acidobacteria C PBS lyase HEAT-like repeat - - - - - - - - - - - - HEAT_2 HSJS2_k127_1260324_1 861299.J421_0306 7.315e-22 99.0 COG1413@1|root,COG1413@2|Bacteria,1ZTQY@142182|Gemmatimonadetes 142182|Gemmatimonadetes C HEAT repeats - - - - - - - - - - - - HEAT_2 HSJS2_k127_1278085_0 1121382.JQKG01000017_gene1834 1.458e-230 743.0 COG0466@1|root,COG0466@2|Bacteria,1WISX@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus O ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner lon2 - 3.4.21.53 ko:K01338 ko04112,map04112 - - - ko00000,ko00001,ko01000,ko01002 - - - AAA,LON_substr_bdg,Lon_C HSJS2_k127_1279025_1 367299.JOEE01000001_gene1522 3.086e-35 137.0 COG5552@1|root,COG5552@2|Bacteria,2IQKN@201174|Actinobacteria,4FHCP@85021|Intrasporangiaceae 201174|Actinobacteria S Uncharacterized conserved protein (DUF2277) - - - - - - - - - - - - DUF2277 HSJS2_k127_1279025_0 1379270.AUXF01000003_gene3431 2.442e-118 404.0 COG0308@1|root,COG0308@2|Bacteria,1ZUT0@142182|Gemmatimonadetes 2|Bacteria E Peptidase family M1 domain - - - - - - - - - - - - Peptidase_M1 HSJS2_k127_1279025_2 1379270.AUXF01000004_gene2933 5.86e-26 113.0 COG2755@1|root,COG2755@2|Bacteria,1ZU6K@142182|Gemmatimonadetes 142182|Gemmatimonadetes E lipolytic protein G-D-S-L family - - - - - - - - - - - - - HSJS2_k127_1297271_1 861299.J421_1740 1.077e-125 416.0 COG1629@1|root,COG4773@1|root,COG4771@2|Bacteria,COG4773@2|Bacteria,1ZV7N@142182|Gemmatimonadetes 142182|Gemmatimonadetes P TonB-dependent Receptor Plug Domain - - - - - - - - - - - - CarboxypepD_reg,Plug HSJS2_k127_1297271_4 1216976.AX27061_5127 1.341e-13 77.0 COG5455@1|root,COG5455@2|Bacteria,1N3PU@1224|Proteobacteria 1224|Proteobacteria S response to cobalt ion cigR - - - - - - - - - - - RcnB HSJS2_k127_1297271_0 1210884.HG799465_gene11386 1.554e-184 584.0 COG4948@1|root,COG4948@2|Bacteria,2IY85@203682|Planctomycetes 203682|Planctomycetes M Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - 4.2.1.171 ko:K21624 ko00330,map00330 - R11625 - ko00000,ko00001,ko01000 - - - MR_MLE_C,MR_MLE_N HSJS2_k127_1297271_2 1382356.JQMP01000003_gene2521 2.271e-69 248.0 COG2423@1|root,COG2423@2|Bacteria,2G6BQ@200795|Chloroflexi,27XIZ@189775|Thermomicrobia 189775|Thermomicrobia E Ornithine cyclodeaminase/mu-crystallin family - - 4.3.1.12 ko:K01750 ko00330,ko01110,ko01130,ko01230,map00330,map01110,map01130,map01230 - R00671 RC00354 ko00000,ko00001,ko01000 - - - OCD_Mu_crystall HSJS2_k127_1297271_3 1111728.ATYS01000006_gene1092 1.328e-24 109.0 COG4283@1|root,COG4283@2|Bacteria,1QHXP@1224|Proteobacteria,1S8S9@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Protein of unknown function (DUF1706) - - - - - - - - - - - - DUF1706 HSJS2_k127_1297352_1 861299.J421_3294 5.293e-78 268.0 COG0377@1|root,COG0377@2|Bacteria,1ZT85@142182|Gemmatimonadetes 142182|Gemmatimonadetes C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient - - 1.6.5.3 ko:K00331 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q6 HSJS2_k127_1297352_3 379066.GAU_1662 1.001e-34 136.0 COG0838@1|root,COG0838@2|Bacteria,1ZTKK@142182|Gemmatimonadetes 142182|Gemmatimonadetes C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoA - 1.6.5.3 ko:K00330 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q4 HSJS2_k127_1297352_4 685035.ADAE01000008_gene2909 1.074e-14 86.0 COG2267@1|root,COG2267@2|Bacteria,1QUPE@1224|Proteobacteria,2TT7G@28211|Alphaproteobacteria,2K0DI@204457|Sphingomonadales 204457|Sphingomonadales I Alpha/beta hydrolase family - - - ko:K06049 - - - - ko00000 - - - Abhydrolase_1,Abhydrolase_4,Abhydrolase_6 HSJS2_k127_1297352_0 861299.J421_3296 7.135e-94 310.0 COG0717@1|root,COG0717@2|Bacteria,1ZSN3@142182|Gemmatimonadetes 142182|Gemmatimonadetes F dUTPase dcd - 3.5.4.13 ko:K01494 ko00240,ko01100,map00240,map01100 M00053 R00568,R02325 RC00074 ko00000,ko00001,ko00002,ko01000 - - - dUTPase HSJS2_k127_1297352_2 378806.STAUR_2938 2.024e-36 151.0 COG2363@1|root,COG2363@2|Bacteria,1MZX3@1224|Proteobacteria,42UHB@68525|delta/epsilon subdivisions,2WQHM@28221|Deltaproteobacteria,2YVPY@29|Myxococcales 28221|Deltaproteobacteria S Protein of unknown function (DUF423) - - - - - - - - - - - - DUF423 HSJS2_k127_1316587_4 292459.STH1996 0.0001504 52.0 COG0517@1|root,COG0517@2|Bacteria,1V9ZB@1239|Firmicutes,25ESC@186801|Clostridia 186801|Clostridia S PFAM CBS domain containing protein - - - - - - - - - - - - CBS HSJS2_k127_1316587_2 42256.RradSPS_2502 1.009e-72 252.0 COG1853@1|root,COG1853@2|Bacteria 2|Bacteria S FMN binding - - - - - - - - - - - - Flavin_Reduct,Putative_PNPOx HSJS2_k127_1316587_0 42256.RradSPS_2501 1.404e-124 421.0 COG0624@1|root,COG0624@2|Bacteria,2GMH2@201174|Actinobacteria,4CQUX@84995|Rubrobacteria 84995|Rubrobacteria E Peptidase M20 - - 3.4.17.11 ko:K01295 - - - - ko00000,ko01000,ko01002 - - - M20_dimer,Peptidase_M20 HSJS2_k127_1316587_1 42256.RradSPS_2500 2.507e-117 407.0 COG3367@1|root,COG3367@2|Bacteria 2|Bacteria M COGs COG3367 conserved - - 2.4.1.18 ko:K16149 ko00500,ko01100,ko01110,map00500,map01100,map01110 M00565 R02110 - ko00000,ko00001,ko00002,ko01000 - GH57 - DUF1611,DUF1611_N,Peptidase_S8 HSJS2_k127_1316587_3 1267533.KB906734_gene4429 4.847e-31 125.0 COG2010@1|root,COG2010@2|Bacteria 2|Bacteria C Cytochrome c - - - - - - - - - - - - Cytochrome_CBB3,DUF1080,Phenol_MetA_deg HSJS2_k127_1316661_1 861299.J421_3538 3.209e-41 165.0 COG0760@1|root,COG0760@2|Bacteria,1ZTD1@142182|Gemmatimonadetes 142182|Gemmatimonadetes O SurA N-terminal domain - - 5.2.1.8 ko:K03770 - - - - ko00000,ko01000,ko03110 - - - Rotamase_2,SurA_N_2 HSJS2_k127_1316661_3 1121377.KB906403_gene3099 2.1e-10 64.0 COG1826@1|root,COG1826@2|Bacteria,1WKJH@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system tatA - - ko:K03116 ko03060,ko03070,map03060,map03070 M00336 - - ko00000,ko00001,ko00002,ko02044 2.A.64 - - MttA_Hcf106 HSJS2_k127_1316661_4 1379270.AUXF01000006_gene28 2.662e-08 59.0 2FH8C@1|root,3492Q@2|Bacteria,1ZTXE@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Domain of unknown function (DUF4321) - - - - - - - - - - - - DUF4321 HSJS2_k127_1316661_0 379066.GAU_1932 2.663e-92 314.0 COG0142@1|root,COG0142@2|Bacteria,1ZT7D@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Polyprenyl synthetase - - 2.5.1.90 ko:K02523 ko00900,ko01110,map00900,map01110 - R09248 RC00279 ko00000,ko00001,ko01000,ko01006 - - - polyprenyl_synt HSJS2_k127_1316661_2 338966.Ppro_0646 9.117e-12 74.0 COG0457@1|root,COG0457@2|Bacteria,1NSRW@1224|Proteobacteria,42YBG@68525|delta/epsilon subdivisions,2WTZ6@28221|Deltaproteobacteria,43TDF@69541|Desulfuromonadales 28221|Deltaproteobacteria S Tetratricopeptide repeat - - - - - - - - - - - - TPR_16,TPR_19 HSJS2_k127_1319734_1 247490.KSU1_C1633 6.641e-180 597.0 COG0166@1|root,COG0176@1|root,COG0166@2|Bacteria,COG0176@2|Bacteria,2IY2M@203682|Planctomycetes 203682|Planctomycetes H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway tal - 2.2.1.2 ko:K00616 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007 R01827 RC00439,RC00604 ko00000,ko00001,ko00002,ko01000 - - - TAL_FSA HSJS2_k127_1319734_2 255470.cbdbA628 6.343e-49 191.0 COG0698@1|root,COG0698@2|Bacteria,2G6SM@200795|Chloroflexi,34DAX@301297|Dehalococcoidia 301297|Dehalococcoidia G Ribose/Galactose Isomerase rpiB - 5.3.1.6 ko:K01808 ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R01056,R09030 RC00376,RC00434 ko00000,ko00001,ko00002,ko01000 - - - LacAB_rpiB HSJS2_k127_1319734_0 1123368.AUIS01000001_gene1896 1.039e-274 872.0 COG0021@1|root,COG0021@2|Bacteria,1MUEY@1224|Proteobacteria,1SJQ1@1236|Gammaproteobacteria,2NDRU@225057|Acidithiobacillales 225057|Acidithiobacillales G Transketolase, thiamine diphosphate binding domain - - 2.2.1.1 ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R01067,R01641,R01830,R06590 RC00032,RC00226,RC00571,RC01560 ko00000,ko00001,ko00002,ko01000 - - - Transket_pyr,Transketolase_C,Transketolase_N HSJS2_k127_1319734_3 370438.PTH_1585 1.048e-43 171.0 COG1640@1|root,COG1640@2|Bacteria,1W5VQ@1239|Firmicutes,25E46@186801|Clostridia,2610T@186807|Peptococcaceae 186801|Clostridia G PFAM glycoside hydrolase family 77 malQ - 2.4.1.25 ko:K00705 ko00500,ko01100,map00500,map01100 - R05196 RC00049 ko00000,ko00001,ko01000 - GH77 - Glyco_hydro_77 HSJS2_k127_1330290_2 319225.Plut_1081 4.003e-41 156.0 COG1131@1|root,COG1131@2|Bacteria,1FDMR@1090|Chlorobi 1090|Chlorobi V PFAM ABC transporter related - - - - - - - - - - - - ABC_tran HSJS2_k127_1330290_0 861299.J421_1776 1.527e-109 362.0 COG1131@1|root,COG1131@2|Bacteria,1ZTMK@142182|Gemmatimonadetes 142182|Gemmatimonadetes V AAA domain, putative AbiEii toxin, Type IV TA system - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HSJS2_k127_1330290_1 861299.J421_1775 6.603e-95 332.0 COG0842@1|root,COG0842@2|Bacteria,1ZTNY@142182|Gemmatimonadetes 142182|Gemmatimonadetes U ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 HSJS2_k127_1345635_0 379066.GAU_0638 6.483e-175 564.0 COG0745@1|root,COG0745@2|Bacteria,1ZTEW@142182|Gemmatimonadetes 142182|Gemmatimonadetes KT PglZ domain - - - - - - - - - - - - PglZ,Response_reg HSJS2_k127_1345635_1 879243.Poras_0727 9.767e-117 398.0 COG1132@1|root,COG1132@2|Bacteria,4NE2D@976|Bacteroidetes,2FMUK@200643|Bacteroidia,22VY0@171551|Porphyromonadaceae 976|Bacteroidetes V ABC transporter, ATP-binding protein msbA - - ko:K06147,ko:K11085 ko02010,map02010 - - - ko00000,ko00001,ko01000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 - - ABC_membrane,ABC_tran HSJS2_k127_1345635_2 648996.Theam_0005 6.35e-07 57.0 COG0438@1|root,COG0438@2|Bacteria,2G49S@200783|Aquificae 200783|Aquificae M PFAM Glycosyl transferase, group 1 - - 2.4.1.87 ko:K00743 ko00601,map00601 - R05978,R06169 - ko00000,ko00001,ko01000,ko01003 - GT6 - Glyco_transf_4,Glycos_transf_1 HSJS2_k127_1345680_0 1379270.AUXF01000006_gene21 6.819e-66 255.0 COG1452@1|root,COG1452@2|Bacteria,1ZT14@142182|Gemmatimonadetes 142182|Gemmatimonadetes M involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane - - - - - - - - - - - - - HSJS2_k127_1345680_1 861299.J421_3548 4.098e-54 198.0 COG0805@1|root,COG0805@2|Bacteria,1ZTHN@142182|Gemmatimonadetes 142182|Gemmatimonadetes U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes tatC - - ko:K03118 ko03060,ko03070,map03060,map03070 M00336 - - ko00000,ko00001,ko00002,ko02044 2.A.64 - - TatC HSJS2_k127_1345680_2 1379698.RBG1_1C00001G1448 1.207e-46 173.0 COG1327@1|root,COG1327@2|Bacteria,2NPEU@2323|unclassified Bacteria 2|Bacteria K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes nrdR GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008144,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - ko:K07738 - - - - ko00000,ko03000 - - - ATP-cone HSJS2_k127_1345680_3 861299.J421_3549 3.007e-32 134.0 COG1729@1|root,COG1729@2|Bacteria,1ZTU4@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Outer membrane lipoprotein - - - - - - - - - - - - TPR_6 HSJS2_k127_1358065_1 1196835.A458_05600 4.321e-64 226.0 COG0518@1|root,COG0519@1|root,COG0518@2|Bacteria,COG0519@2|Bacteria,1MU2A@1224|Proteobacteria,1RP81@1236|Gammaproteobacteria,1Z0DM@136846|Pseudomonas stutzeri group 1236|Gammaproteobacteria F Catalyzes the synthesis of GMP from XMP guaA GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002 - - iJN746.PP_1032,iSF_1195.SF2553,iSFxv_1172.SFxv_2808,iS_1188.S2725,iYL1228.KPN_02833 GATase,GMP_synt_C,NAD_synthase HSJS2_k127_1358065_0 861299.J421_3390 2.368e-156 502.0 COG0442@1|root,COG0442@2|Bacteria,1ZT48@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) proS - 6.1.1.15 ko:K01881 ko00970,map00970 M00359,M00360 R03661 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - HGTP_anticodon,ProRS-C_1,tRNA-synt_2b HSJS2_k127_135917_3 643562.Daes_1416 9.888e-36 142.0 COG1259@1|root,COG1259@2|Bacteria,1RFFV@1224|Proteobacteria,42SCI@68525|delta/epsilon subdivisions,2WPWT@28221|Deltaproteobacteria,2M8KC@213115|Desulfovibrionales 28221|Deltaproteobacteria S Bifunctional nuclease - - - ko:K08999 - - - - ko00000 - - - DNase-RNase HSJS2_k127_135917_0 886293.Sinac_1569 9.447e-168 538.0 COG0499@1|root,COG0499@2|Bacteria,2IXKQ@203682|Planctomycetes 203682|Planctomycetes H May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine ahcY - 3.3.1.1 ko:K01251 ko00270,ko01100,map00270,map01100 M00035 R00192,R04936 RC00056,RC00069,RC01161,RC01243 ko00000,ko00001,ko00002,ko01000,ko01009,ko04147 - - - AdoHcyase,AdoHcyase_NAD HSJS2_k127_135917_1 889378.Spiaf_0011 9.653e-120 419.0 COG0192@1|root,COG0192@2|Bacteria,2J6MD@203691|Spirochaetes 203691|Spirochaetes H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme metK - 2.5.1.6 ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 M00034,M00035,M00368,M00609 R00177,R04771 RC00021,RC01211 ko00000,ko00001,ko00002,ko01000 - - - S-AdoMet_synt_C,S-AdoMet_synt_M,S-AdoMet_synt_N HSJS2_k127_135917_2 1444309.JAQG01000016_gene683 3.551e-105 361.0 COG1080@1|root,COG1080@2|Bacteria,1TPK8@1239|Firmicutes,4H9VD@91061|Bacilli,26QD5@186822|Paenibacillaceae 91061|Bacilli G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) - - 2.7.3.9 ko:K08483 ko02060,map02060 - - - ko00000,ko00001,ko01000,ko02000 8.A.7 - - PEP-utilisers_N,PEP-utilizers,PEP-utilizers_C HSJS2_k127_1362885_0 518766.Rmar_0355 8.225e-33 145.0 COG1629@1|root,COG4771@2|Bacteria,4NTQD@976|Bacteroidetes 976|Bacteroidetes P TonB-dependent Receptor Plug - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,Plug,TonB_dep_Rec HSJS2_k127_1362885_1 861299.J421_1645 1.655e-05 49.0 2A4CF@1|root,30SY3@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - Yip1 HSJS2_k127_1364640_0 760192.Halhy_5338 5.465e-87 302.0 COG2072@1|root,COG2072@2|Bacteria 2|Bacteria P N,N-dimethylaniline monooxygenase activity - - - - - - - - - - - - K_oxygenase,Pyr_redox_2,Pyr_redox_3 HSJS2_k127_1364640_1 266779.Meso_0348 3.17e-60 219.0 2E3HM@1|root,32YG7@2|Bacteria,1NM0U@1224|Proteobacteria,2TZYE@28211|Alphaproteobacteria,43RX1@69277|Phyllobacteriaceae 28211|Alphaproteobacteria - - - - - - - - - - - - - - - HSJS2_k127_1364640_2 477974.Daud_0884 9.357e-18 86.0 COG2227@1|root,COG2227@2|Bacteria,1UGIP@1239|Firmicutes,24KA4@186801|Clostridia,2626I@186807|Peptococcaceae 186801|Clostridia H PFAM O-methyltransferase family 2 - - - - - - - - - - - - Methyltransf_2 HSJS2_k127_1416562_2 861299.J421_3003 8.141e-90 302.0 COG1960@1|root,COG1960@2|Bacteria,1ZSRC@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Acyl-CoA dehydrogenase, C-terminal domain - - - - - - - - - - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N HSJS2_k127_1416562_1 861299.J421_3004 2.725e-140 462.0 COG0334@1|root,COG0334@2|Bacteria,1ZTBQ@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Glutamate/Leucine/Phenylalanine/Valine dehydrogenase - - 1.4.1.9 ko:K00263 ko00280,ko00290,ko01100,ko01110,ko01130,map00280,map00290,map01100,map01110,map01130 - R01088,R01434,R02196 RC00006,RC00036 ko00000,ko00001,ko01000 - - - ELFV_dehydrog,ELFV_dehydrog_N HSJS2_k127_1416562_0 1089548.KI783301_gene3099 1.779e-159 531.0 COG0112@1|root,COG0112@2|Bacteria,1TQVM@1239|Firmicutes,4HA5K@91061|Bacilli,3WE62@539002|Bacillales incertae sedis 91061|Bacilli E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism glyA - 2.1.2.1 ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 M00140,M00141,M00346,M00532 R00945,R09099 RC00022,RC00112,RC01583,RC02958 ko00000,ko00001,ko00002,ko01000 - - - SHMT HSJS2_k127_1416562_3 1089550.ATTH01000001_gene767 1.272e-31 131.0 COG1739@1|root,COG1739@2|Bacteria,4NF0D@976|Bacteroidetes,1FJ9B@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes S Domain of unknown function (DUF1949) yigZ - - - - - - - - - - - UPF0029 HSJS2_k127_1441420_2 1206725.BAFU01000044_gene2112 5.358e-16 92.0 COG3214@1|root,COG3214@2|Bacteria,2GK0T@201174|Actinobacteria,4FVI4@85025|Nocardiaceae 201174|Actinobacteria S Winged helix DNA-binding domain - - - - - - - - - - - - HTH_42 HSJS2_k127_1441420_0 479432.Sros_2905 4.771e-107 363.0 COG0154@1|root,COG0154@2|Bacteria,2GKPZ@201174|Actinobacteria,4EHYD@85012|Streptosporangiales 201174|Actinobacteria J Amidase - - 3.5.1.4 ko:K01426 ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120 - R02540,R03096,R03180,R03909,R05551,R05590 RC00010,RC00100,RC00950,RC01025 ko00000,ko00001,ko01000 - - - Amidase HSJS2_k127_1441420_1 891968.Anamo_1247 1.449e-34 133.0 COG1878@1|root,COG1878@2|Bacteria,3TCHY@508458|Synergistetes 508458|Synergistetes S Putative cyclase - - - - - - - - - - - - Cyclase HSJS2_k127_1486899_0 861299.J421_0577 1.161e-18 97.0 COG1404@1|root,COG3291@1|root,COG1404@2|Bacteria,COG3291@2|Bacteria,1ZV5J@142182|Gemmatimonadetes 2|Bacteria O Subtilase family - - 3.2.1.14,3.4.21.50 ko:K01183,ko:K01337,ko:K14645 ko00520,ko01100,ko02024,map00520,map01100,map02024 - R01206,R02334 RC00467 ko00000,ko00001,ko01000,ko01002,ko03110 - GH18 - Inhibitor_I9,PKD,PPC,P_proprotein,Peptidase_M14,Peptidase_S8 HSJS2_k127_1486899_1 926559.JoomaDRAFT_3326 1.042e-10 61.0 COG1012@1|root,COG1012@2|Bacteria,4NEB7@976|Bacteroidetes,1HXNG@117743|Flavobacteriia 976|Bacteroidetes C Aldehyde dehydrogenase sad - 1.2.1.16,1.2.1.20,1.2.1.3,1.2.1.79 ko:K00128,ko:K00135 ko00010,ko00053,ko00071,ko00250,ko00280,ko00310,ko00330,ko00340,ko00350,ko00380,ko00410,ko00561,ko00620,ko00625,ko00650,ko00760,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00250,map00280,map00310,map00330,map00340,map00350,map00380,map00410,map00561,map00620,map00625,map00650,map00760,map00903,map00981,map01100,map01110,map01120,map01130 M00027,M00135 R00264,R00631,R00710,R00713,R00714,R00904,R01752,R01986,R02401,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146 RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500 ko00000,ko00001,ko00002,ko01000 - - - Aldedh HSJS2_k127_1523930_4 1121472.AQWN01000001_gene115 1.278e-23 101.0 COG5405@1|root,COG5405@2|Bacteria,1TPXK@1239|Firmicutes,24FS4@186801|Clostridia,261JH@186807|Peptococcaceae 186801|Clostridia O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery hslV - 3.4.25.2 ko:K01419 - - - - ko00000,ko01000,ko01002 - - - Proteasome HSJS2_k127_1523930_0 379066.GAU_2503 6.261e-177 571.0 COG1220@1|root,COG1220@2|Bacteria,1ZSVP@142182|Gemmatimonadetes 142182|Gemmatimonadetes O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis hslU - - ko:K03667 - - - - ko00000,ko03110 - - - AAA_2,ClpB_D2-small HSJS2_k127_1523930_2 385682.AFSL01000003_gene1905 4.892e-110 368.0 COG0404@1|root,COG0404@2|Bacteria,4NF7S@976|Bacteroidetes,2FPDM@200643|Bacteroidia,3XJ88@558415|Marinilabiliaceae 976|Bacteroidetes E Aminomethyltransferase folate-binding domain gcvT - 2.1.2.10 ko:K00605 ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200 M00532 R01221,R02300,R04125 RC00022,RC00069,RC00183,RC02834 ko00000,ko00001,ko00002,ko01000 - - - GCV_T,GCV_T_C HSJS2_k127_1523930_3 861299.J421_3956 9.88e-43 175.0 COG0521@1|root,COG0521@2|Bacteria,1ZU2Z@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Probable molybdopterin binding domain - - 2.7.7.75 ko:K03831 ko00790,ko01100,ko04122,map00790,map01100,map04122 - R09726 RC00002 ko00000,ko00001,ko01000 - - - MoCF_biosynth HSJS2_k127_1523930_1 861299.J421_3955 3.053e-127 426.0 COG2204@1|root,COG2204@2|Bacteria,1ZSWY@142182|Gemmatimonadetes 142182|Gemmatimonadetes T Bacterial regulatory protein, Fis family - - - - - - - - - - - - HTH_8,Sigma54_activat HSJS2_k127_1527062_5 1487953.JMKF01000058_gene5079 2.959e-35 138.0 COG2135@1|root,COG2135@2|Bacteria,1G1SA@1117|Cyanobacteria,1HAGW@1150|Oscillatoriales 1117|Cyanobacteria S Belongs to the SOS response-associated peptidase family - - - - - - - - - - - - SRAP HSJS2_k127_1527062_2 314225.ELI_11015 1.534e-46 176.0 COG1309@1|root,COG1309@2|Bacteria,1RA4T@1224|Proteobacteria,2U0G2@28211|Alphaproteobacteria,2K7V1@204457|Sphingomonadales 204457|Sphingomonadales K Bacterial transcriptional repressor C-terminal - - - - - - - - - - - - TetR_C_13,TetR_N HSJS2_k127_1527062_3 234267.Acid_2204 2.064e-46 180.0 COG0698@1|root,COG0698@2|Bacteria 2|Bacteria G galactose-6-phosphate isomerase activity upp - 2.4.2.9,5.3.1.6 ko:K00761,ko:K01808 ko00030,ko00051,ko00240,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00240,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R00966,R01056,R09030 RC00063,RC00376,RC00434 ko00000,ko00001,ko00002,ko01000 - - - LacAB_rpiB,UPRTase HSJS2_k127_1527062_1 1191523.MROS_1910 4.958e-73 265.0 COG0274@1|root,COG0274@2|Bacteria 2|Bacteria F deoxyribose-phosphate aldolase activity deoC GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 2.7.1.15,4.1.2.4,5.4.2.8,5.4.3.3 ko:K00852,ko:K01619,ko:K01840,ko:K01844 ko00030,ko00051,ko00310,ko00520,ko01100,ko01110,ko01130,map00030,map00051,map00310,map00520,map01100,map01110,map01130 M00114 R01051,R01066,R01818,R02750,R02852,R03275 RC00002,RC00017,RC00408,RC00436,RC00437,RC00719 ko00000,ko00001,ko00002,ko01000 - - iSB619.SA_RS00835,iYO844.BSU39420 DeoC,Lys-AminoMut_A HSJS2_k127_1527062_0 56110.Oscil6304_5272 7.896e-94 311.0 COG4577@1|root,COG4577@2|Bacteria,1G0GA@1117|Cyanobacteria,1H73J@1150|Oscillatoriales 1117|Cyanobacteria CQ PFAM BMC domain - - - - - - - - - - - - BMC HSJS2_k127_1527062_4 1499967.BAYZ01000012_gene2485 1.97e-38 146.0 COG4577@1|root,COG4577@2|Bacteria,2NRBW@2323|unclassified Bacteria 2|Bacteria CQ COGs COG4577 Carbon dioxide concentrating mechanism carboxysome shell protein - - - ko:K04027 - - - - ko00000 - - - BMC HSJS2_k127_1527062_6 215803.DB30_1142 8.795e-27 112.0 COG4576@1|root,COG4576@2|Bacteria,1RIK4@1224|Proteobacteria,4362N@68525|delta/epsilon subdivisions,2X9F2@28221|Deltaproteobacteria,2Z246@29|Myxococcales 28221|Deltaproteobacteria CQ Ethanolamine utilisation protein EutN/carboxysome - - - - - - - - - - - - EutN_CcmL HSJS2_k127_1530871_0 118163.Ple7327_4031 6.724e-178 578.0 COG1166@1|root,COG1166@2|Bacteria,1G1C4@1117|Cyanobacteria,3VIBA@52604|Pleurocapsales 1117|Cyanobacteria E Catalyzes the biosynthesis of agmatine from arginine speA - 4.1.1.19 ko:K01585 ko00330,ko01100,map00330,map01100 M00133 R00566 RC00299 ko00000,ko00001,ko00002,ko01000 - - - Orn_Arg_deC_N HSJS2_k127_1530871_4 379066.GAU_2304 6.659e-64 234.0 COG3595@1|root,COG3595@2|Bacteria,1ZTJA@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Putative adhesin - - - - - - - - - - - - DUF4097 HSJS2_k127_1530871_9 1089550.ATTH01000001_gene1932 4.036e-49 192.0 COG1714@1|root,COG1714@2|Bacteria 2|Bacteria S RDD family - - - - - - - - - - - - RDD HSJS2_k127_1530871_12 1340493.JNIF01000003_gene3264 1.655e-32 142.0 COG0265@1|root,COG0265@2|Bacteria,3Y4AJ@57723|Acidobacteria 57723|Acidobacteria O PDZ DHR GLGF domain protein - - - - - - - - - - - - PDZ_2 HSJS2_k127_1530871_10 1128421.JAGA01000002_gene1321 1.291e-37 156.0 COG1597@1|root,COG1597@2|Bacteria,2NR9K@2323|unclassified Bacteria 2|Bacteria I Diacylglycerol kinase catalytic domain (presumed) dagK GO:0003674,GO:0003824,GO:0004143,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237 2.7.1.107 ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 - R02240 RC00002,RC00017 ko00000,ko00001,ko01000 - - - DAGK_cat HSJS2_k127_1530871_8 414684.RC1_3385 3.413e-51 196.0 COG0135@1|root,COG0135@2|Bacteria,1RA5Q@1224|Proteobacteria,2U5E8@28211|Alphaproteobacteria 28211|Alphaproteobacteria E N-(5'phosphoribosyl)anthranilate (PRA) isomerase - - 5.3.1.24 ko:K01817 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R03509 RC00945 ko00000,ko00001,ko00002,ko01000 - - - PRAI HSJS2_k127_1530871_13 216591.BCAM0869 3.315e-30 127.0 COG0545@1|root,COG0545@2|Bacteria,1RDA1@1224|Proteobacteria,2VSIG@28216|Betaproteobacteria,1K7PD@119060|Burkholderiaceae 28216|Betaproteobacteria G peptidyl-prolyl cis-trans isomerase fkpA - 5.2.1.8 ko:K01802,ko:K03772 - - - - ko00000,ko01000,ko03110 - - - FKBP_C HSJS2_k127_1530871_5 670487.Ocepr_0982 1.68e-54 202.0 COG0730@1|root,COG0730@2|Bacteria,1WJ68@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S membrane transporter protein - - - ko:K07090 - - - - ko00000 - - - TauE HSJS2_k127_1530871_16 1121085.AUCI01000002_gene4020 8.984e-08 57.0 2BFS6@1|root,329M0@2|Bacteria,1UBZZ@1239|Firmicutes,4INFW@91061|Bacilli,1ZNF2@1386|Bacillus 91061|Bacilli S OsmC-like protein - - - - - - - - - - - - OsmC HSJS2_k127_1530871_7 1249627.D779_4106 6.046e-52 196.0 COG0229@1|root,COG0229@2|Bacteria,1RGWC@1224|Proteobacteria,1S5WI@1236|Gammaproteobacteria,1WYPS@135613|Chromatiales 135613|Chromatiales O Belongs to the MsrB Met sulfoxide reductase family msrB - 1.8.4.12 ko:K07305 - - - - ko00000,ko01000 - - - SelR HSJS2_k127_1530871_14 379066.GAU_2220 1.596e-29 123.0 2EQTX@1|root,33IDK@2|Bacteria,1ZUY7@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_1530871_2 1523503.JPMY01000021_gene3050 1.16e-67 245.0 COG3217@1|root,COG3217@2|Bacteria,1REVG@1224|Proteobacteria,1SYD6@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Fe-S protein ycbX - - ko:K07140 - - - - ko00000 - - - MOSC,MOSC_N HSJS2_k127_1530871_15 1082705.JIBP01000015_gene1167 7.992e-08 63.0 28HSZ@1|root,2Z7ZZ@2|Bacteria,1PKZD@1224|Proteobacteria,1RY25@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - HSJS2_k127_1530871_6 448385.sce8117 9.925e-54 203.0 COG2267@1|root,COG2267@2|Bacteria,1NYNM@1224|Proteobacteria,43CA0@68525|delta/epsilon subdivisions,2X7KG@28221|Deltaproteobacteria,2YVW6@29|Myxococcales 28221|Deltaproteobacteria I alpha/beta hydrolase fold - - - - - - - - - - - - Abhydrolase_1,Abhydrolase_6 HSJS2_k127_1530871_11 648996.Theam_0005 8.758e-36 157.0 COG0438@1|root,COG0438@2|Bacteria,2G49S@200783|Aquificae 200783|Aquificae M PFAM Glycosyl transferase, group 1 - - 2.4.1.87 ko:K00743 ko00601,map00601 - R05978,R06169 - ko00000,ko00001,ko01000,ko01003 - GT6 - Glyco_transf_4,Glycos_transf_1 HSJS2_k127_1530871_3 519989.ECTPHS_10521 4.226e-65 251.0 COG0429@1|root,COG0429@2|Bacteria,1MWV1@1224|Proteobacteria,1RN39@1236|Gammaproteobacteria,1WWM3@135613|Chromatiales 135613|Chromatiales S PFAM Alpha beta hydrolase - - - ko:K07019 - - - - ko00000 - - - Abhydrolase_1,Hydrolase_4 HSJS2_k127_1530871_1 861299.J421_2864 1.155e-116 404.0 COG2133@1|root,COG2133@2|Bacteria 2|Bacteria G pyrroloquinoline quinone binding - - - - - - - - - - - - CBM_2,GSDH HSJS2_k127_1561658_1 1144275.COCOR_00262 1.186e-119 403.0 COG5000@1|root,COG5000@2|Bacteria,1MWKZ@1224|Proteobacteria,4345U@68525|delta/epsilon subdivisions,2X20T@28221|Deltaproteobacteria,2YVEZ@29|Myxococcales 28221|Deltaproteobacteria T PAS domain - - - - - - - - - - - - HATPase_c,PAS HSJS2_k127_1561658_0 926566.Terro_2393 4.876e-157 509.0 COG2204@1|root,COG2204@2|Bacteria,3Y33M@57723|Acidobacteria,2JHW9@204432|Acidobacteriia 204432|Acidobacteriia T response regulator - - - - - - - - - - - - HTH_8,Response_reg,Sigma54_activat HSJS2_k127_1561658_2 234267.Acid_6481 7.79e-99 336.0 COG1136@1|root,COG1136@2|Bacteria,3Y2J0@57723|Acidobacteria 57723|Acidobacteria V PFAM ABC transporter - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HSJS2_k127_1561658_3 1340493.JNIF01000003_gene4404 1.531e-26 115.0 COG0845@1|root,COG0845@2|Bacteria,3Y2FV@57723|Acidobacteria 57723|Acidobacteria M TIGRFAM efflux transporter, RND family, MFP subunit - - - - - - - - - - - - HlyD_3,HlyD_D23 HSJS2_k127_1563302_5 861299.J421_2074 6.442e-27 127.0 COG1668@1|root,COG1668@2|Bacteria,1ZTID@142182|Gemmatimonadetes 142182|Gemmatimonadetes CP ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 HSJS2_k127_1563302_1 240015.ACP_1742 4.535e-84 293.0 COG4152@1|root,COG4152@2|Bacteria,3Y2NV@57723|Acidobacteria,2JHVX@204432|Acidobacteriia 204432|Acidobacteriia S pfam abc - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran,DUF4162 HSJS2_k127_1563302_4 713586.KB900536_gene2189 4.201e-42 165.0 COG0500@1|root,COG2226@2|Bacteria,1MX8I@1224|Proteobacteria,1RMAU@1236|Gammaproteobacteria,1WWSM@135613|Chromatiales 135613|Chromatiales H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) ubiE - 2.1.1.163,2.1.1.201 ko:K03183 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116,M00117 R04990,R04993,R06859,R08774,R09736 RC00003,RC01253,RC01662 ko00000,ko00001,ko00002,ko01000 - - - Ubie_methyltran HSJS2_k127_1563302_2 861299.J421_3994 2.552e-64 226.0 COG3417@1|root,COG3417@2|Bacteria 2|Bacteria M Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b) lpoB GO:0000270,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0019899,GO:0030203,GO:0030234,GO:0030312,GO:0030313,GO:0031241,GO:0031975,GO:0034645,GO:0042546,GO:0043085,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044093,GO:0044237,GO:0044249,GO:0044260,GO:0044425,GO:0044462,GO:0044464,GO:0050790,GO:0065007,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0098552,GO:0098772,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 - ko:K07337,ko:K21008 ko02025,map02025 - - - ko00000,ko00001 - - - LpoB HSJS2_k127_1563302_6 349124.Hhal_1831 1.26e-22 113.0 COG3014@1|root,COG3014@2|Bacteria,1PD4S@1224|Proteobacteria,1RQ8Y@1236|Gammaproteobacteria 1236|Gammaproteobacteria S protein conserved in bacteria - - - ko:K09859 - - - - ko00000 - - - - HSJS2_k127_1563302_0 861299.J421_2988 9.891e-142 479.0 COG0457@1|root,COG0659@1|root,COG0457@2|Bacteria,COG0659@2|Bacteria 2|Bacteria P secondary active sulfate transmembrane transporter activity - - - - - - - - - - - - - HSJS2_k127_1563302_7 443144.GM21_0922 7.082e-10 61.0 COG3932@1|root,COG3932@2|Bacteria,1N0FN@1224|Proteobacteria 1224|Proteobacteria S ABC-type transport system, permease components - - - - - - - - - - - - ExoD HSJS2_k127_1564190_4 383372.Rcas_1300 4.092e-14 80.0 COG2373@1|root,COG2373@2|Bacteria,2G5XN@200795|Chloroflexi 200795|Chloroflexi S PFAM alpha-2-macroglobulin domain protein - - - ko:K06894 - - - - ko00000 - - - A2M,A2M_N,A2M_N_2,Big_5,MG1 HSJS2_k127_1564190_3 379066.GAU_2157 1.057e-17 98.0 2EFCU@1|root,3395Q@2|Bacteria,1ZTVZ@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_1564190_1 861299.J421_3755 1.751e-72 260.0 COG0643@1|root,COG0643@2|Bacteria,1ZSPB@142182|Gemmatimonadetes 142182|Gemmatimonadetes NT Histidine kinase-like ATPases - - - - - - - - - - - - - HSJS2_k127_1564190_2 861299.J421_3754 1.413e-61 231.0 COG0524@1|root,COG0524@2|Bacteria,1ZTFD@142182|Gemmatimonadetes 142182|Gemmatimonadetes G Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway - - - - - - - - - - - - - HSJS2_k127_1564190_0 861299.J421_3753 8.65e-102 337.0 COG1940@1|root,COG1940@2|Bacteria,1ZT66@142182|Gemmatimonadetes 142182|Gemmatimonadetes GK ROK family - - 2.7.1.2 ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - ROK HSJS2_k127_1575234_2 861299.J421_2828 2.426e-30 126.0 COG0735@1|root,COG0735@2|Bacteria,1ZTN4@142182|Gemmatimonadetes 142182|Gemmatimonadetes P Ferric uptake regulator family - - - ko:K03711 - - - - ko00000,ko03000 - - - FUR HSJS2_k127_1575234_1 1379270.AUXF01000002_gene1195 6.578e-54 196.0 COG0461@1|root,COG0461@2|Bacteria,1ZTMR@142182|Gemmatimonadetes 142182|Gemmatimonadetes F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) pyrE - 2.4.2.10 ko:K00762 ko00240,ko01100,map00240,map01100 M00051 R01870 RC00611 ko00000,ko00001,ko00002,ko01000 - - - Pribosyltran HSJS2_k127_1575234_0 525904.Tter_0599 6.443e-83 285.0 COG0506@1|root,COG0506@2|Bacteria,2NPED@2323|unclassified Bacteria 2|Bacteria E Proline dehydrogenase - - - ko:K00318 ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130 - R10507 RC00083 ko00000,ko00001,ko01000 - - - Pro_dh HSJS2_k127_1583041_1 519442.Huta_2329 9.181e-06 51.0 COG0474@1|root,arCOG01578@2157|Archaea,2XT4B@28890|Euryarchaeota,23T61@183963|Halobacteria 183963|Halobacteria P COG0474 Cation transport ATPase - - 3.6.3.8 ko:K01537 - - - - ko00000,ko01000 3.A.3.2 - - Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase HSJS2_k127_1583041_0 247490.KSU1_C1036 2.813e-201 645.0 COG0574@1|root,COG1080@1|root,COG0574@2|Bacteria,COG1080@2|Bacteria,2IYJS@203682|Planctomycetes 203682|Planctomycetes G Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate - - - - - - - - - - - - PEP-utilizers,PEP-utilizers_C,PPDK_N HSJS2_k127_1595341_5 861299.J421_3452 4.573e-27 115.0 COG0030@1|root,COG0030@2|Bacteria,1ZT2M@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits ksgA - 2.1.1.182 ko:K02528 - - R10716 RC00003,RC03257 ko00000,ko01000,ko03009 - - - RrnaAD HSJS2_k127_1595341_3 861299.J421_3451 9.436e-49 181.0 COG2344@1|root,COG2344@2|Bacteria,1ZTJV@142182|Gemmatimonadetes 142182|Gemmatimonadetes K Modulates transcription in response to changes in cellular NADH NAD( ) redox state rex - - ko:K01926 - - - - ko00000,ko03000 - - - CoA_binding,Put_DNA-bind_N HSJS2_k127_1595341_2 709991.Odosp_0151 1.368e-71 257.0 COG2235@1|root,COG2235@2|Bacteria,4NHKZ@976|Bacteroidetes,2FRKB@200643|Bacteroidia 976|Bacteroidetes E Amidinotransferase - - 3.5.3.6 ko:K01478 ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130 - R00552 RC00177 ko00000,ko00001,ko01000 - - - Amidinotransf HSJS2_k127_1595341_4 861299.J421_3450 4.987e-44 183.0 COG0847@1|root,COG0847@2|Bacteria,1ZTNH@142182|Gemmatimonadetes 142182|Gemmatimonadetes L EXOIII - - 2.7.7.7 ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - RNase_T HSJS2_k127_1595341_0 1379270.AUXF01000006_gene81 1.546e-93 316.0 COG0491@1|root,COG0491@2|Bacteria,1ZT7V@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Metallo-beta-lactamase superfamily - - - - - - - - - - - - Lactamase_B HSJS2_k127_1595341_6 761193.Runsl_2852 9.001e-19 95.0 2CM2H@1|root,32SDI@2|Bacteria,4NSAF@976|Bacteroidetes,47R71@768503|Cytophagia 976|Bacteroidetes S Putative lumazine-binding - - - - - - - - - - - - Lumazine_bd_2 HSJS2_k127_1595341_1 861299.J421_3000 8.355e-77 263.0 COG0183@1|root,COG0183@2|Bacteria,1ZTGX@142182|Gemmatimonadetes 142182|Gemmatimonadetes I Thiolase, C-terminal domain - - 2.3.1.9 ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 M00088,M00095,M00373,M00374,M00375 R00238,R01177 RC00004,RC00326 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Thiolase_C,Thiolase_N HSJS2_k127_160176_1 28444.JODQ01000006_gene792 8.64e-31 133.0 COG0584@1|root,COG0584@2|Bacteria,2GJ5W@201174|Actinobacteria,4EIE7@85012|Streptosporangiales 201174|Actinobacteria C Glycerophosphoryl diester phosphodiesterase family glpQ2 - 3.1.4.46 ko:K01126 ko00564,map00564 - R01030,R01470 RC00017,RC00425 ko00000,ko00001,ko01000 - - - GDPD HSJS2_k127_160176_0 1379270.AUXF01000003_gene3443 4.413e-148 475.0 COG0473@1|root,COG0473@2|Bacteria,1ZTDX@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Isocitrate/isopropylmalate dehydrogenase - - 1.1.1.41 ko:K00030 ko00020,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010 R00709 RC00114 br01601,ko00000,ko00001,ko00002,ko01000 - - - Iso_dh HSJS2_k127_1604747_3 1123504.JQKD01000029_gene4228 5.701e-21 93.0 COG0290@1|root,COG0290@2|Bacteria,1RDD2@1224|Proteobacteria,2VQ19@28216|Betaproteobacteria,4AAWJ@80864|Comamonadaceae 28216|Betaproteobacteria J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins infC - - ko:K02520 - - - - ko00000,ko03012,ko03029 - - - IF3_C,IF3_N HSJS2_k127_1604747_4 350688.Clos_1977 1.02e-16 81.0 COG0291@1|root,COG0291@2|Bacteria,1VF5W@1239|Firmicutes,24QJD@186801|Clostridia,36MNG@31979|Clostridiaceae 186801|Clostridia J Belongs to the bacterial ribosomal protein bL35 family rpmI - - ko:K02916 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L35p HSJS2_k127_1604747_2 379066.GAU_1876 9.999e-39 147.0 COG0292@1|root,COG0292@2|Bacteria,1ZTUF@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit rplT - - ko:K02887 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L20 HSJS2_k127_1604747_1 428125.CLOLEP_02088 4.089e-106 355.0 COG0016@1|root,COG0016@2|Bacteria,1TPFW@1239|Firmicutes,2486E@186801|Clostridia,3WGWV@541000|Ruminococcaceae 186801|Clostridia J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily pheS - 6.1.1.20 ko:K01889 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Phe_tRNA-synt_N,tRNA-synt_2d HSJS2_k127_1604747_0 574087.Acear_0398 3.726e-115 391.0 COG0072@1|root,COG0072@2|Bacteria,1TP98@1239|Firmicutes,248BJ@186801|Clostridia,3WAH1@53433|Halanaerobiales 186801|Clostridia J TIGRFAM phenylalanyl-tRNA synthetase, beta subunit pheT GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 ko:K01890 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - B3_4,B5,FDX-ACB,tRNA-synt_2d,tRNA_bind HSJS2_k127_1607769_0 886293.Sinac_3585 6.641e-52 200.0 COG1807@1|root,COG1807@2|Bacteria 2|Bacteria M 4-amino-4-deoxy-L-arabinose transferase activity - - - ko:K14340 - - - - ko00000,ko01000,ko01003 - - - PMT_2 HSJS2_k127_1607769_1 886293.Sinac_3585 2.248e-37 156.0 COG1807@1|root,COG1807@2|Bacteria 2|Bacteria M 4-amino-4-deoxy-L-arabinose transferase activity - - - ko:K14340 - - - - ko00000,ko01000,ko01003 - - - PMT_2 HSJS2_k127_161008_0 314264.ROS217_10207 2.364e-82 281.0 COG0156@1|root,COG0156@2|Bacteria,1MVVH@1224|Proteobacteria,2TQYP@28211|Alphaproteobacteria,46N9E@74030|Roseovarius 28211|Alphaproteobacteria H Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA kbl - 2.3.1.29 ko:K00639 ko00260,map00260 - R00371 RC00004,RC00394 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 HSJS2_k127_1627439_1 379066.GAU_0558 3.392e-89 320.0 COG0646@1|root,COG0685@1|root,COG0646@2|Bacteria,COG0685@2|Bacteria,1ZT6C@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Methylenetetrahydrofolate reductase - - 1.5.1.20,2.1.1.10 ko:K00297,ko:K00547 ko00270,ko00670,ko00720,ko01100,ko01110,ko01120,ko01200,ko01523,map00270,map00670,map00720,map01100,map01110,map01120,map01200,map01523 M00377 R00650,R01224,R07168 RC00003,RC00035,RC00081 ko00000,ko00001,ko00002,ko01000 - - - MTHFR,S-methyl_trans HSJS2_k127_1627439_0 349124.Hhal_2154 1.05e-110 366.0 COG0646@1|root,COG1410@1|root,COG0646@2|Bacteria,COG1410@2|Bacteria,1MV6G@1224|Proteobacteria,1RMYD@1236|Gammaproteobacteria,1WW84@135613|Chromatiales 135613|Chromatiales E Vitamin B12 dependent methionine synthase activation metH - 2.1.1.13 ko:K00548 ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230 M00017 R00946,R09365 RC00035,RC00113,RC01241 ko00000,ko00001,ko00002,ko01000 - - - B12-binding,B12-binding_2,Met_synt_B12,Pterin_bind,S-methyl_trans HSJS2_k127_16614_0 1305836.AXVE01000011_gene683 4.091e-98 333.0 COG0018@1|root,COG0018@2|Bacteria,1TPEZ@1239|Firmicutes,4HAR3@91061|Bacilli,26CVI@186818|Planococcaceae 91061|Bacilli J Arginyl-tRNA synthetase argS GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 ko:K01887 ko00970,map00970 M00359,M00360 R03646 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - Arg_tRNA_synt_N,DALR_1,tRNA-synt_1d HSJS2_k127_16614_1 1379270.AUXF01000005_gene721 2.757e-93 316.0 COG0150@1|root,COG0150@2|Bacteria,1ZSQJ@142182|Gemmatimonadetes 142182|Gemmatimonadetes F AIR synthase related protein, C-terminal domain purM - 6.3.3.1 ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04208 RC01100 ko00000,ko00001,ko00002,ko01000 - - - AIRS,AIRS_C HSJS2_k127_1671078_1 639282.DEFDS_1886 2.714e-135 451.0 COG0055@1|root,COG0055@2|Bacteria,2GEQN@200930|Deferribacteres 200930|Deferribacteres C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits atpD - 3.6.3.14 ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194,ko01000 3.A.2.1 - - ATP-synt_ab,ATP-synt_ab_N HSJS2_k127_1671078_3 861299.J421_2628 5.859e-89 303.0 COG0224@1|root,COG0224@2|Bacteria,1ZSZR@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex atpG - - ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - ATP-synt HSJS2_k127_1671078_0 861299.J421_2627 9.292e-235 736.0 COG0056@1|root,COG0056@2|Bacteria,1ZSNY@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit atpA - 3.6.3.14 ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194,ko01000 3.A.2.1 - - ATP-synt_ab,ATP-synt_ab_C,ATP-synt_ab_N HSJS2_k127_1671078_8 861299.J421_3944 1.287e-31 132.0 COG0712@1|root,COG0712@2|Bacteria,1ZTP8@142182|Gemmatimonadetes 142182|Gemmatimonadetes C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation atpH - - ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - OSCP HSJS2_k127_1671078_9 861299.J421_3945 6.233e-27 117.0 COG0711@1|root,COG0711@2|Bacteria,1ZTPY@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) atpF - - ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - ATP-synt_B HSJS2_k127_1671078_10 379066.GAU_2489 1.12e-15 80.0 COG0636@1|root,COG0636@2|Bacteria,1ZU1W@142182|Gemmatimonadetes 142182|Gemmatimonadetes C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation atpE - - ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - ATP-synt_C HSJS2_k127_1671078_5 861299.J421_3947 3.682e-68 244.0 COG0356@1|root,COG0356@2|Bacteria,1ZSQ5@142182|Gemmatimonadetes 142182|Gemmatimonadetes C it plays a direct role in the translocation of protons across the membrane atpB - - ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194,ko03110 3.A.2.1 - - ATP-synt_A HSJS2_k127_1671078_2 861299.J421_3951 9.792e-129 420.0 COG0714@1|root,COG0714@2|Bacteria,1ZT5U@142182|Gemmatimonadetes 142182|Gemmatimonadetes S ATPase family associated with various cellular activities (AAA) - - - ko:K03924 - - - - ko00000,ko01000 - - - AAA_3 HSJS2_k127_1671078_4 926692.AZYG01000007_gene1278 4.916e-83 291.0 COG1253@1|root,COG1253@2|Bacteria,1TPN0@1239|Firmicutes,2489N@186801|Clostridia,3WAE6@53433|Halanaerobiales 186801|Clostridia S CBS domain - - - - - - - - - - - - CBS,CorC_HlyC,DUF21 HSJS2_k127_1671078_6 379066.GAU_2351 1.577e-51 191.0 COG1989@1|root,COG1989@2|Bacteria,1ZT9K@142182|Gemmatimonadetes 142182|Gemmatimonadetes NOU Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue - - 3.4.23.43 ko:K02654 - M00331 - - ko00000,ko00002,ko01000,ko01002,ko02035,ko02044 3.A.15.2 - - DiS_P_DiS,Peptidase_A24 HSJS2_k127_1671078_7 760568.Desku_0644 1.385e-33 136.0 COG0566@1|root,COG0566@2|Bacteria,1V3JP@1239|Firmicutes,248DV@186801|Clostridia,265M1@186807|Peptococcaceae 186801|Clostridia J RNA 2'-O ribose methyltransferase substrate binding spoU - - ko:K03437 - - - - ko00000,ko03016 - - - SpoU_methylase,SpoU_sub_bind HSJS2_k127_1671853_1 861299.J421_3251 9.42e-95 324.0 COG1137@1|root,COG1137@2|Bacteria,1ZT4S@142182|Gemmatimonadetes 142182|Gemmatimonadetes S ABC transporter - - - ko:K06861 ko02010,map02010 M00320 - - ko00000,ko00001,ko00002,ko01000,ko02000 1.B.42.1 - - ABC_tran HSJS2_k127_1671853_0 861299.J421_3250 7.71e-182 582.0 COG1508@1|root,COG1508@2|Bacteria,1ZT13@142182|Gemmatimonadetes 142182|Gemmatimonadetes K Sigma-54 factor, Activator interacting domain (AID) - - - ko:K03092 ko02020,ko05111,map02020,map05111 - - - ko00000,ko00001,ko03021 - - - Sigma54_AID,Sigma54_CBD,Sigma54_DBD HSJS2_k127_1671853_2 1379698.RBG1_1C00001G1315 1.127e-74 279.0 COG0463@1|root,COG0463@2|Bacteria,2NP2G@2323|unclassified Bacteria 2|Bacteria M Glycosyltransferase like family 2 arnC - 2.4.1.83 ko:K00721 ko00510,ko01100,map00510,map01100 - R01009 RC00005 ko00000,ko00001,ko01000,ko01003 - GT2 - Glycos_transf_2 HSJS2_k127_1684916_0 861299.J421_0795 1.799e-100 337.0 COG0156@1|root,COG0156@2|Bacteria,1ZST6@142182|Gemmatimonadetes 2|Bacteria H Beta-eliminating lyase bioF GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.3.1.29,2.3.1.47 ko:K00639,ko:K00652 ko00260,ko00780,ko01100,map00260,map00780,map01100 M00123,M00573,M00577 R00371,R03210,R10124 RC00004,RC00039,RC00394,RC02725 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_1_2 HSJS2_k127_1684916_1 525904.Tter_0551 8.455e-94 318.0 COG3294@1|root,COG3294@2|Bacteria,2NR9E@2323|unclassified Bacteria 2|Bacteria S PFAM metal-dependent phosphohydrolase HD sub domain - - - ko:K09163 - - - - ko00000 - - - HD HSJS2_k127_1684916_2 740709.A10D4_00735 5.548e-55 201.0 COG1073@1|root,COG1073@2|Bacteria,1RIWI@1224|Proteobacteria,1S0GF@1236|Gammaproteobacteria 1236|Gammaproteobacteria S alpha beta mhpC - - ko:K06889 - - - - ko00000 - - - Hydrolase_4 HSJS2_k127_1697399_1 861299.J421_1780 1.567e-60 216.0 COG1309@1|root,COG1309@2|Bacteria 2|Bacteria K transcriptional regulator - - - ko:K09017 - - - - ko00000,ko03000 - - - TetR_C_3,TetR_N HSJS2_k127_1697399_0 404589.Anae109_4185 1.634e-127 421.0 COG3424@1|root,COG3424@2|Bacteria,1MUDX@1224|Proteobacteria,42S7Y@68525|delta/epsilon subdivisions,2WNF3@28221|Deltaproteobacteria,2YZHC@29|Myxococcales 28221|Deltaproteobacteria Q Chalcone and stilbene synthases, C-terminal domain - - 2.3.1.233 ko:K16167,ko:K19580 - - R10965 RC00004 ko00000,ko01000,ko01008 - - - Chal_sti_synt_C,Chal_sti_synt_N HSJS2_k127_1705365_5 1123256.KB907929_gene3348 6.507e-14 74.0 COG0849@1|root,COG0849@2|Bacteria,1MUSR@1224|Proteobacteria,1RMXY@1236|Gammaproteobacteria,1X3BK@135614|Xanthomonadales 135614|Xanthomonadales D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring ftsA - - ko:K03590 ko04112,map04112 - - - ko00000,ko00001,ko03036,ko04812 - - - FtsA,SHS2_FTSA HSJS2_k127_1705365_0 1379270.AUXF01000005_gene695 1.128e-142 465.0 COG0206@1|root,COG0206@2|Bacteria,1ZSNH@142182|Gemmatimonadetes 142182|Gemmatimonadetes D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity ftsZ - - ko:K03531 ko04112,map04112 - - - ko00000,ko00001,ko02048,ko03036,ko04812 - - - FtsZ_C,Tubulin HSJS2_k127_1705365_3 396588.Tgr7_2406 2.19e-56 209.0 COG0739@1|root,COG0739@2|Bacteria,1MVTF@1224|Proteobacteria,1RM7S@1236|Gammaproteobacteria,1WX4H@135613|Chromatiales 135613|Chromatiales M PFAM peptidase - - - - - - - - - - - - OapA,Peptidase_M23 HSJS2_k127_1705365_4 379066.GAU_1441 1.752e-34 151.0 COG1572@1|root,COG1572@2|Bacteria,1ZSTW@142182|Gemmatimonadetes 142182|Gemmatimonadetes NU bacterial-type flagellum-dependent cell motility - - - - - - - - - - - - - HSJS2_k127_1705365_1 379066.GAU_1442 2.505e-81 282.0 COG0552@1|root,COG0552@2|Bacteria,1ZTBT@142182|Gemmatimonadetes 142182|Gemmatimonadetes D Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) ftsY - - ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2,3.A.5.7 - - SRP54,SRP54_N HSJS2_k127_1705365_2 861299.J421_3084 2.186e-58 214.0 COG1200@1|root,COG1200@2|Bacteria,1ZT3C@142182|Gemmatimonadetes 142182|Gemmatimonadetes L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) recG - 3.6.4.12 ko:K03655 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C,RecG_wedge HSJS2_k127_1713642_0 861299.J421_3598 1.268e-45 180.0 COG1071@1|root,COG1071@2|Bacteria,1ZT5G@142182|Gemmatimonadetes 2|Bacteria C The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) bfmBA - 1.2.4.1,1.2.4.4 ko:K00161,ko:K11381,ko:K21416 ko00010,ko00020,ko00280,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00280,map00620,map00640,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00036,M00307 R00014,R00209,R01699,R03270,R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997 RC00004,RC00027,RC00627,RC02742,RC02743,RC02744,RC02882,RC02883,RC02949,RC02953 br01601,ko00000,ko00001,ko00002,ko01000 - - - E1_dh,Transket_pyr,Transketolase_C HSJS2_k127_1723194_3 1041138.KB890253_gene4126 4.19e-06 49.0 COG3488@1|root,COG3488@2|Bacteria,1MXUW@1224|Proteobacteria,2TS75@28211|Alphaproteobacteria,4B7PZ@82115|Rhizobiaceae 28211|Alphaproteobacteria C Thiol oxidoreductase - - - - - - - - - - - - DHOR HSJS2_k127_1723194_2 290397.Adeh_3146 7.198e-20 97.0 COG0723@1|root,COG0723@2|Bacteria 2|Bacteria C oxidoreductase activity, acting on diphenols and related substances as donors - - - - - - - - - - - - Rieske HSJS2_k127_1723194_1 421072.IO89_10280 2.045e-54 213.0 COG1730@1|root,COG1730@2|Bacteria,4NHZT@976|Bacteroidetes,1HZM3@117743|Flavobacteriia 976|Bacteroidetes O unfolded protein binding - - - - - - - - - - - - - HSJS2_k127_1723194_0 1379270.AUXF01000001_gene2469 1.248e-67 239.0 COG2866@1|root,COG2866@2|Bacteria,1ZT9V@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Zn_pept - - - - - - - - - - - - Peptidase_M14 HSJS2_k127_1723294_0 247490.KSU1_C1314 6.353e-96 329.0 COG0535@1|root,COG0535@2|Bacteria,2J2KS@203682|Planctomycetes 203682|Planctomycetes S Proto-chlorophyllide reductase 57 kD subunit - - - - - - - - - - - - PCP_red,Radical_SAM,SPASM HSJS2_k127_1723294_1 330214.NIDE0901 1.251e-50 191.0 COG1271@1|root,COG1271@2|Bacteria 2|Bacteria C aerobic electron transport chain - - 1.10.3.14 ko:K00425,ko:K08738 ko00190,ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00190,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416 M00153,M00595 R10151,R11325 RC00061,RC03151,RC03152 ko00000,ko00001,ko00002,ko01000 3.D.4.3,3.D.4.6 - - Cyt_bd_oxida_I,Cytochrome_CBB3 HSJS2_k127_1728683_0 316274.Haur_4289 1.183e-73 264.0 COG0171@1|root,COG0388@1|root,COG0171@2|Bacteria,COG0388@2|Bacteria,2G7JV@200795|Chloroflexi,375WH@32061|Chloroflexia 32061|Chloroflexia H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source - - 6.3.1.5 ko:K01916 ko00760,ko01100,map00760,map01100 M00115 R00189 RC00100 ko00000,ko00001,ko00002,ko01000 - - - NAD_synthase HSJS2_k127_1728683_1 342610.Patl_1496 1.817e-13 79.0 COG1266@1|root,COG1266@2|Bacteria 2|Bacteria V CAAX protease self-immunity - - - ko:K07052 - - - - ko00000 - - - Abi HSJS2_k127_1728683_2 452637.Oter_3355 2.453e-07 64.0 COG3746@1|root,COG3746@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - Porin_O_P HSJS2_k127_1730818_1 861299.J421_1368 4.607e-55 205.0 COG0312@1|root,COG0312@2|Bacteria,1ZSYW@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Putative modulator of DNA gyrase - - - - - - - - - - - - PmbA_TldD HSJS2_k127_1730818_2 411154.GFO_1603 3.495e-19 94.0 28P6F@1|root,2ZC14@2|Bacteria,4NMZU@976|Bacteroidetes,1I1J4@117743|Flavobacteriia 976|Bacteroidetes - - - - - - - - - - - - - - - HSJS2_k127_1730818_0 861299.J421_4471 4.514e-128 414.0 COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,1ZT89@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Transketolase, pyrimidine binding domain - - 1.2.4.4 ko:K11381 ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130 M00036 R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997 RC00027,RC00627,RC02743,RC02883,RC02949,RC02953 br01601,ko00000,ko00001,ko00002,ko01000 - - - E1_dh,Transket_pyr,Transketolase_C HSJS2_k127_173216_0 517418.Ctha_2706 3.375e-225 716.0 COG0841@1|root,COG0841@2|Bacteria,1FDJ5@1090|Chlorobi 1090|Chlorobi V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ACR_tran HSJS2_k127_173216_1 1303518.CCALI_01175 1.192e-15 80.0 COG0607@1|root,32YCZ@2|Bacteria 2|Bacteria P Sulfurtransferase - - - - - - - - - - - - DUF2892 HSJS2_k127_1734308_0 379066.GAU_1953 3.474e-220 694.0 COG0556@1|root,COG0556@2|Bacteria,1ZSQS@142182|Gemmatimonadetes 142182|Gemmatimonadetes L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage uvrB - - ko:K03702 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - Helicase_C,ResIII,UVR,UvrB HSJS2_k127_1736958_9 861299.J421_3521 3.721e-06 53.0 2FKVD@1|root,34CFS@2|Bacteria,1ZV4C@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_1736958_8 379066.GAU_1913 6.148e-35 147.0 COG4464@1|root,COG4464@2|Bacteria,1ZTQH@142182|Gemmatimonadetes 142182|Gemmatimonadetes GM protein tyrosine phosphatase activity - - 3.1.3.48 ko:K01104 - - - - ko00000,ko01000 - - - - HSJS2_k127_1736958_6 861299.J421_3519 1.16e-47 179.0 COG0279@1|root,COG0279@2|Bacteria,1ZTY5@142182|Gemmatimonadetes 142182|Gemmatimonadetes G SIS domain - - 5.3.1.28 ko:K03271 ko00540,ko01100,map00540,map01100 M00064 R05645,R09768,R09769 RC00434 ko00000,ko00001,ko00002,ko01000,ko01005 - - - SIS_2 HSJS2_k127_1736958_3 861299.J421_3513 1.121e-87 310.0 COG0617@1|root,COG0617@2|Bacteria,1ZSKW@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Probable RNA and SrmB- binding site of polymerase A - - 2.7.7.72 ko:K00974 ko03013,map03013 - R09382,R09383,R09384,R09386 RC00078 ko00000,ko00001,ko01000,ko03016 - - - PolyA_pol,PolyA_pol_RNAbd,tRNA_NucTran2_2 HSJS2_k127_1736958_0 861299.J421_3508 1.668e-149 491.0 COG2256@1|root,COG2256@2|Bacteria,1ZTCA@142182|Gemmatimonadetes 142182|Gemmatimonadetes L MgsA AAA+ ATPase C terminal - - - ko:K07478 - - - - ko00000 - - - AAA_assoc_2,MgsA_C,RuvB_N HSJS2_k127_1736958_1 861299.J421_3506 7.83e-128 424.0 COG2262@1|root,COG2262@2|Bacteria,1ZSYM@142182|Gemmatimonadetes 142182|Gemmatimonadetes S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis hflX - - ko:K03665 - - - - ko00000,ko03009 - - - GTP-bdg_M,GTP-bdg_N,MMR_HSR1 HSJS2_k127_1736958_4 321327.CYA_2272 3.169e-84 286.0 COG0854@1|root,COG0854@2|Bacteria,1G0QW@1117|Cyanobacteria,1GZKF@1129|Synechococcus 1117|Cyanobacteria H Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate pdxJ GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 ko:K03474 ko00750,ko01100,map00750,map01100 M00124 R05838 RC01476 ko00000,ko00001,ko00002,ko01000 - - - PdxJ HSJS2_k127_1736958_5 379066.GAU_1245 2.861e-56 216.0 COG0392@1|root,COG0392@2|Bacteria,1ZT5W@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Lysylphosphatidylglycerol synthase TM region - - - ko:K07027 - - - - ko00000,ko02000 4.D.2 - - LPG_synthase_TM HSJS2_k127_1736958_7 370438.PTH_0096 2.75e-44 183.0 COG1947@1|root,COG1947@2|Bacteria,1TPXV@1239|Firmicutes,24898@186801|Clostridia,261HE@186807|Peptococcaceae 186801|Clostridia F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol ispE - 2.7.1.148 ko:K00919 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05634 RC00002,RC01439 ko00000,ko00001,ko00002,ko01000 - - - GHMP_kinases_C,GHMP_kinases_N HSJS2_k127_1736958_2 448385.sce0363 1.212e-103 349.0 COG0515@1|root,COG0515@2|Bacteria,1P913@1224|Proteobacteria,4377Q@68525|delta/epsilon subdivisions,2X28Z@28221|Deltaproteobacteria,2YUDY@29|Myxococcales 28221|Deltaproteobacteria KLT Protein kinase domain - - - - - - - - - - - - Pkinase HSJS2_k127_1737848_0 443143.GM18_3379 2.478e-127 424.0 COG0513@1|root,COG0513@2|Bacteria,1MU49@1224|Proteobacteria,42MGZ@68525|delta/epsilon subdivisions,2WIY6@28221|Deltaproteobacteria 28221|Deltaproteobacteria L Belongs to the DEAD box helicase family rhlE-2 - 3.6.4.13 ko:K11927 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - DEAD,Helicase_C HSJS2_k127_1737848_1 706436.HMPREF9074_08024 2.226e-18 87.0 COG0405@1|root,COG0405@2|Bacteria,4NF2H@976|Bacteroidetes,1HXTC@117743|Flavobacteriia,1EQ8X@1016|Capnocytophaga 976|Bacteroidetes M gamma-glutamyltransferase ggt - 2.3.2.2,3.4.19.13 ko:K00681 ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100 - R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935 RC00064,RC00090,RC00096 ko00000,ko00001,ko01000,ko01002 - - - G_glu_transpept HSJS2_k127_1741140_0 880073.Calab_2849 3.35e-64 241.0 COG0823@1|root,COG4775@1|root,COG0823@2|Bacteria,COG4775@2|Bacteria,2NQSG@2323|unclassified Bacteria 2|Bacteria MU WD40-like Beta Propeller Repeat - - - ko:K03641,ko:K07277 - - - - ko00000,ko02000,ko03029 1.B.33,2.C.1.2 - - BSP,Bac_surface_Ag,PD40,Peptidase_MA_2 HSJS2_k127_1758876_0 1379270.AUXF01000006_gene164 5.349e-75 262.0 COG1974@1|root,COG1974@2|Bacteria,1ZSSM@142182|Gemmatimonadetes 142182|Gemmatimonadetes K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair lexA - 3.4.21.88 ko:K01356 - M00729 - - ko00000,ko00002,ko01000,ko01002,ko03400 - - - LexA_DNA_bind,Peptidase_S24 HSJS2_k127_1758876_1 36874.HQ34_02095 1.611e-28 121.0 COG0101@1|root,COG0101@2|Bacteria,4NFDC@976|Bacteroidetes,2FP2H@200643|Bacteroidia,22WF1@171551|Porphyromonadaceae 976|Bacteroidetes J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs truA - 5.4.99.12 ko:K06173 - - - - ko00000,ko01000,ko03016 - - - PseudoU_synth_1 HSJS2_k127_1769173_0 1408254.T458_11300 1.525e-51 199.0 COG1194@1|root,COG1194@2|Bacteria,1TPUT@1239|Firmicutes,4H9UM@91061|Bacilli,26SYT@186822|Paenibacillaceae 91061|Bacilli L Adenine glycosylase mutY - - ko:K03575 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - EndIII_4Fe-2S,HhH-GPD,NUDIX_4 HSJS2_k127_1769173_1 335543.Sfum_0057 1.292e-40 160.0 COG0253@1|root,COG0253@2|Bacteria,1MWDH@1224|Proteobacteria,42MRX@68525|delta/epsilon subdivisions,2WMP4@28221|Deltaproteobacteria,2MQD5@213462|Syntrophobacterales 28221|Deltaproteobacteria E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan dapF - 5.1.1.7 ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00527 R02735 RC00302 ko00000,ko00001,ko00002,ko01000 - - - DAP_epimerase HSJS2_k127_1794948_2 497321.C664_08788 0.0001682 46.0 COG0507@1|root,COG0507@2|Bacteria,1MW43@1224|Proteobacteria,2VGZ6@28216|Betaproteobacteria 28216|Betaproteobacteria L A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD recD2 - 3.1.11.5 ko:K03581 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - AAA_30,HHH_4,HHH_5,UvrD_C_2 HSJS2_k127_1794948_0 518766.Rmar_1529 8.5e-44 166.0 COG2094@1|root,COG2094@2|Bacteria,4NP22@976|Bacteroidetes,1FJ9P@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes L Belongs to the DNA glycosylase MPG family mpg - 3.2.2.21 ko:K03652 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Pur_DNA_glyco HSJS2_k127_1794948_1 1297742.A176_01664 1.505e-37 150.0 COG2355@1|root,COG2355@2|Bacteria,1MWEW@1224|Proteobacteria,42NXB@68525|delta/epsilon subdivisions,2WMBF@28221|Deltaproteobacteria,2YW82@29|Myxococcales 28221|Deltaproteobacteria E Membrane dipeptidase (Peptidase family M19) - - 3.4.13.19 ko:K01273 - - - - ko00000,ko00537,ko01000,ko01002,ko04147 - - - Peptidase_M19 HSJS2_k127_1814110_2 861299.J421_3137 1.059e-25 117.0 COG0542@1|root,COG0542@2|Bacteria,1ZT9Z@142182|Gemmatimonadetes 142182|Gemmatimonadetes O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE clpB - - ko:K03695 ko04213,map04213 - - - ko00000,ko00001,ko03110 - - - AAA,AAA_2,ClpB_D2-small,Clp_N HSJS2_k127_1814110_4 3656.XP_008457420.1 4.62e-14 85.0 COG0071@1|root,KOG0710@2759|Eukaryota,37Y9H@33090|Viridiplantae,3GX6U@35493|Streptophyta,4JVYJ@91835|fabids 35493|Streptophyta O Belongs to the small heat shock protein (HSP20) family - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - ko:K13993 ko04141,map04141 - - - ko00000,ko00001,ko03110 - - - HSP20 HSJS2_k127_1814110_1 379066.GAU_3855 5.657e-41 166.0 COG0767@1|root,COG0767@2|Bacteria,1ZUC4@142182|Gemmatimonadetes 142182|Gemmatimonadetes Q Permease MlaE - - - ko:K02066 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - MlaE HSJS2_k127_1814110_0 1379270.AUXF01000004_gene3177 8.254e-58 223.0 COG1127@1|root,COG1127@2|Bacteria,1ZT5N@142182|Gemmatimonadetes 142182|Gemmatimonadetes Q ABC transporter - - - ko:K02065 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - ABC_tran HSJS2_k127_1814110_3 908612.HMPREF9720_1976 3.572e-18 95.0 COG1463@1|root,COG1463@2|Bacteria,4NHT9@976|Bacteroidetes,2FPK9@200643|Bacteroidia,22UF5@171550|Rikenellaceae 976|Bacteroidetes Q virulence factor Mce family protein - - - ko:K02067 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - MlaD HSJS2_k127_1818653_3 945713.IALB_2287 1.461e-35 142.0 COG1595@1|root,COG1595@2|Bacteria 2|Bacteria K DNA-templated transcription, initiation sigH GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016987,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0043254,GO:0044087,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 HSJS2_k127_1818653_2 240292.Ava_3892 1.215e-54 200.0 COG2135@1|root,COG2135@2|Bacteria,1G1SA@1117|Cyanobacteria,1HM2J@1161|Nostocales 1117|Cyanobacteria S Belongs to the SOS response-associated peptidase family - - - - - - - - - - - - SRAP HSJS2_k127_1818653_1 1128421.JAGA01000003_gene3727 6.679e-149 482.0 COG0274@1|root,COG0274@2|Bacteria 2|Bacteria F deoxyribose-phosphate aldolase activity deoC - 4.1.2.4 ko:K01619 ko00030,map00030 - R01066 RC00436,RC00437 ko00000,ko00001,ko01000 - - - DeoC HSJS2_k127_1818653_0 649638.Trad_0840 0.0 1129.0 COG1012@1|root,COG1012@2|Bacteria,1WIGH@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus C Belongs to the aldehyde dehydrogenase family - - 1.2.1.3 ko:K00128 ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130 M00135 R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146 RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500 ko00000,ko00001,ko00002,ko01000 - - - Aldedh HSJS2_k127_1818653_4 546414.Deide_16480 6.157e-08 55.0 COG1335@1|root,COG1335@2|Bacteria 2|Bacteria Q hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides - - 3.5.1.19 ko:K08281 ko00760,ko01100,map00760,map01100 - R01268 RC00100 ko00000,ko00001,ko01000 - - - Isochorismatase,MDMPI_N HSJS2_k127_1836604_1 937777.Deipe_2633 1.063e-76 261.0 COG4864@1|root,COG4864@2|Bacteria,1WI32@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S UPF0365 protein - - - - - - - - - - - - YdfA_immunity HSJS2_k127_1836604_0 945713.IALB_2104 6.53e-93 322.0 COG1030@1|root,COG1030@2|Bacteria 2|Bacteria - - nfeD - - ko:K07403 - - - - ko00000 - - - NfeD,Peptidase_S49,SDH_sah HSJS2_k127_1859594_0 768671.ThimaDRAFT_1160 7.975e-205 649.0 COG0458@1|root,COG0458@2|Bacteria,1MUDZ@1224|Proteobacteria,1RPIU@1236|Gammaproteobacteria,1WVW8@135613|Chromatiales 135613|Chromatiales EF Belongs to the CarB family carB - 6.3.5.5 ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - - CPSase_L_D2,CPSase_L_D3,MGS HSJS2_k127_1864470_2 1521187.JPIM01000051_gene3479 7.651e-47 177.0 COG1162@1|root,COG1162@2|Bacteria,2G5IS@200795|Chloroflexi,375B8@32061|Chloroflexia 32061|Chloroflexia S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit rsgA - 3.1.3.100 ko:K06949 ko00730,ko01100,map00730,map01100 - R00615,R02135 RC00002,RC00017 ko00000,ko00001,ko01000,ko03009 - - - RsgA_GTPase,RsgA_N HSJS2_k127_1864470_3 1307436.PBF_09053 4.412e-44 168.0 COG0822@1|root,COG0822@2|Bacteria,1V3H9@1239|Firmicutes,4HIJ0@91061|Bacilli,1ZFQ8@1386|Bacillus 91061|Bacilli C COG0822 NifU homolog involved in Fe-S cluster formation nifU GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016740,GO:0016782,GO:0019538,GO:0019725,GO:0030003,GO:0036455,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071704,GO:0097428,GO:0098771,GO:1901564 - ko:K04488 - - - - ko00000 - - - NifU_N HSJS2_k127_1864470_0 76114.ebA6367 3.901e-139 458.0 COG0520@1|root,COG0520@2|Bacteria,1MUPD@1224|Proteobacteria,2VIQW@28216|Betaproteobacteria,2KUXB@206389|Rhodocyclales 206389|Rhodocyclales E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - 2.8.1.7,4.4.1.16 ko:K11717 ko00450,ko01100,map00450,map01100 - R03599,R11528 RC00961,RC01789,RC02313 ko00000,ko00001,ko01000 - - - Aminotran_5 HSJS2_k127_1864470_4 471852.Tcur_2226 2.545e-26 112.0 COG2146@1|root,COG2146@2|Bacteria,2IQK7@201174|Actinobacteria,4EK27@85012|Streptosporangiales 201174|Actinobacteria P Rieske-like [2Fe-2S] domain sufE - - ko:K05710 ko00360,ko01120,ko01220,map00360,map01120,map01220 M00545 R06782,R06783 RC00098 br01602,ko00000,ko00001,ko00002 - - - Rieske HSJS2_k127_1864470_1 266117.Rxyl_0168 1.41e-94 321.0 COG0719@1|root,COG0719@2|Bacteria,2GJNV@201174|Actinobacteria,4CQXR@84995|Rubrobacteria 84995|Rubrobacteria O Uncharacterized protein family (UPF0051) - - - ko:K09015 - - - - ko00000 - - - UPF0051 HSJS2_k127_1878183_0 1192034.CAP_3532 1.472e-161 525.0 COG0488@1|root,COG0488@2|Bacteria,1MU37@1224|Proteobacteria,42M2A@68525|delta/epsilon subdivisions,2WJ41@28221|Deltaproteobacteria,2YUJJ@29|Myxococcales 28221|Deltaproteobacteria S ABC transporter, ATP-binding protein - - - - - - - - - - - - ABC_tran,ABC_tran_Xtn HSJS2_k127_1878387_4 1267535.KB906767_gene2888 6.954e-48 177.0 COG1236@1|root,COG1236@2|Bacteria,3Y6U0@57723|Acidobacteria,2JMFJ@204432|Acidobacteriia 204432|Acidobacteriia J Beta-Casp domain - - - ko:K07576 - - - - ko00000 - - - Beta-Casp,Lactamase_B,Lactamase_B_6,RMMBL HSJS2_k127_1878387_2 118163.Ple7327_1459 8.636e-73 254.0 COG1611@1|root,COG1611@2|Bacteria,1G0YF@1117|Cyanobacteria 1117|Cyanobacteria S lysine decarboxylase - - 3.2.2.10 ko:K06966 ko00230,ko00240,map00230,map00240 - R00182,R00510 RC00063,RC00318 ko00000,ko00001,ko01000 - - - Lysine_decarbox HSJS2_k127_1878387_3 211114.JOEF01000006_gene2399 2.506e-56 208.0 28HIR@1|root,2Z7U4@2|Bacteria,2GN2S@201174|Actinobacteria,4E2KI@85010|Pseudonocardiales 201174|Actinobacteria S succinate dehydrogenase sdhC - - ko:K00241 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002 - - - Sdh_cyt HSJS2_k127_1878387_0 240015.ACP_0102 5.209e-316 977.0 COG1053@1|root,COG1053@2|Bacteria,3Y2MQ@57723|Acidobacteria,2JIC4@204432|Acidobacteriia 204432|Acidobacteriia C Succinate dehydrogenase or fumarate reductase, flavoprotein subunit - - 1.3.5.1,1.3.5.4 ko:K00239 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 - - - FAD_binding_2,Succ_DH_flav_C HSJS2_k127_1878387_1 1121920.AUAU01000004_gene645 5.354e-111 379.0 COG0479@1|root,COG0479@2|Bacteria,3Y3XR@57723|Acidobacteria 57723|Acidobacteria C 2Fe-2S iron-sulfur cluster binding domain - - 1.3.5.1,1.3.5.4 ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 - - - Fer2_3,Fer4_7,Fer4_8 HSJS2_k127_1878387_6 1122138.AQUZ01000054_gene5902 2.823e-17 90.0 COG0819@1|root,COG0819@2|Bacteria,2IGXQ@201174|Actinobacteria 201174|Actinobacteria K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4-amino-5-aminomethyl-2-methylpyrimidine to 4-amino- 5-hydroxymethyl-2-methylpyrimidine (HMP) - - - ko:K20896 ko00730,ko01100,map00730,map01100 - R09993,R11313 RC00197,RC02832 ko00000,ko00001,ko01000 - - - TENA_THI-4 HSJS2_k127_1878387_5 479435.Kfla_1296 1.137e-18 93.0 COG2340@1|root,COG2340@2|Bacteria,2GM57@201174|Actinobacteria,4DSJN@85009|Propionibacteriales 201174|Actinobacteria S Cysteine-rich secretory protein family - - - - - - - - - - - - CAP HSJS2_k127_1894745_0 861299.J421_3077 1.775e-84 295.0 COG0773@1|root,COG0773@2|Bacteria,1ZSQG@142182|Gemmatimonadetes 142182|Gemmatimonadetes M Belongs to the MurCDEF family murC - 6.3.2.8 ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 - R03193 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M HSJS2_k127_1894745_2 1384484.AEQU_2003 2.232e-48 185.0 COG0812@1|root,COG0812@2|Bacteria,2GIV2@201174|Actinobacteria,4CUE7@84998|Coriobacteriia 84998|Coriobacteriia M Cell wall formation murB - 1.3.1.98 ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 - R03191,R03192 RC02639 ko00000,ko00001,ko01000,ko01011 - - - FAD_binding_4,MurB_C HSJS2_k127_1894745_3 264732.Moth_0847 6.572e-06 57.0 COG1589@1|root,COG1589@2|Bacteria,1VEMW@1239|Firmicutes,24QKM@186801|Clostridia,42JBV@68295|Thermoanaerobacterales 186801|Clostridia D POTRA domain, FtsQ-type ftsQ - - ko:K03589 ko04112,map04112 - - - ko00000,ko00001,ko03036 - - - FtsQ,POTRA_1 HSJS2_k127_1894745_1 1379270.AUXF01000005_gene693 1.557e-81 295.0 COG0849@1|root,COG0849@2|Bacteria,1ZSRE@142182|Gemmatimonadetes 142182|Gemmatimonadetes D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring ftsA - - ko:K03590 ko04112,map04112 - - - ko00000,ko00001,ko03036,ko04812 - - - FtsA,SHS2_FTSA HSJS2_k127_1898077_2 1379270.AUXF01000006_gene185 2.405e-80 277.0 COG3185@1|root,COG3185@2|Bacteria,1ZT5D@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Acyclic terpene utilisation family protein AtuA - - - - - - - - - - - - AtuA HSJS2_k127_1898077_0 861299.J421_3346 7.748e-233 734.0 COG4799@1|root,COG4799@2|Bacteria,1ZTGB@142182|Gemmatimonadetes 142182|Gemmatimonadetes I Carboxyl transferase domain - - - - - - - - - - - - Carboxyl_trans HSJS2_k127_1898077_3 861299.J421_3347 2.92e-62 217.0 COG2185@1|root,COG2185@2|Bacteria,1ZTNN@142182|Gemmatimonadetes 142182|Gemmatimonadetes I B12 binding domain - - 5.4.99.2 ko:K01849 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00375,M00376,M00741 R00833 RC00395 ko00000,ko00001,ko00002,ko01000 - - - B12-binding HSJS2_k127_1898077_1 861299.J421_3349 1.631e-228 722.0 COG1884@1|root,COG1884@2|Bacteria,1ZUKS@142182|Gemmatimonadetes 142182|Gemmatimonadetes I Methylmalonyl-CoA mutase - - 5.4.99.13,5.4.99.2 ko:K01848,ko:K11942 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00375,M00376,M00741 R00833 RC00395 ko00000,ko00001,ko00002,ko01000 - - - MM_CoA_mutase HSJS2_k127_1945013_5 679926.Mpet_2492 3.314e-21 96.0 COG0473@1|root,arCOG01163@2157|Archaea,2XT99@28890|Euryarchaeota,2N94T@224756|Methanomicrobia 224756|Methanomicrobia C PFAM isocitrate isopropylmalate dehydrogenase aksF - 1.1.1.87 ko:K10978 ko00300,ko00680,ko01100,ko01120,ko01130,ko01210,ko01230,map00300,map00680,map01100,map01120,map01130,map01210,map01230 M00608 R01934,R01936,R04862,R08214,R08215 RC00084,RC00114,RC00626 br01601,ko00000,ko00001,ko00002,ko01000 - - - Iso_dh HSJS2_k127_1945013_0 404589.Anae109_0064 4.036e-151 487.0 COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,42MSR@68525|delta/epsilon subdivisions,2WIXG@28221|Deltaproteobacteria,2Z30V@29|Myxococcales 28221|Deltaproteobacteria I Thiolase, C-terminal domain - - 2.3.1.16,2.3.1.9 ko:K00626,ko:K07508 ko00062,ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00062,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 M00085,M00087,M00088,M00095,M00373,M00374,M00375 R00238,R00391,R00927,R01177,R03778,R03858,R03991,R04546,R04742,R04747 RC00004,RC00326,RC00405,RC01702 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Thiolase_C,Thiolase_N HSJS2_k127_1945013_3 706587.Desti_1112 5.097e-90 308.0 COG0330@1|root,COG0330@2|Bacteria,1MUM8@1224|Proteobacteria,42NX0@68525|delta/epsilon subdivisions,2WISZ@28221|Deltaproteobacteria,2MQ9P@213462|Syntrophobacterales 28221|Deltaproteobacteria O PFAM Band 7 protein - - - - - - - - - - - - Band_7 HSJS2_k127_1945013_6 1379270.AUXF01000002_gene1802 1.635e-14 83.0 2FK9E@1|root,34BX2@2|Bacteria,1ZTYM@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_1945013_2 204669.Acid345_1212 1.039e-108 359.0 COG1250@1|root,COG1250@2|Bacteria,3Y3S5@57723|Acidobacteria,2JI6S@204432|Acidobacteriia 57723|Acidobacteria I 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain - - 1.1.1.157 ko:K00074 ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120 - R01976,R05576,R06941 RC00029,RC00117 ko00000,ko00001,ko01000 - - - 3HCDH,3HCDH_N HSJS2_k127_1945013_4 861299.J421_2731 1.278e-88 306.0 COG1195@1|root,COG1195@2|Bacteria,1ZSRU@142182|Gemmatimonadetes 142182|Gemmatimonadetes L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP recF - - ko:K03629 ko03440,map03440 - - - ko00000,ko00001,ko03400 - - - SMC_N HSJS2_k127_1945013_7 1283299.AUKG01000001_gene1759 2.535e-06 57.0 COG5512@1|root,COG5512@2|Bacteria 2|Bacteria L Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives - - - - - - - - - - - - DUF721 HSJS2_k127_1945013_1 195103.CPF_0006 9.746e-121 397.0 COG0187@1|root,COG0187@2|Bacteria,1TQ0R@1239|Firmicutes,248AV@186801|Clostridia,36DYE@31979|Clostridiaceae 186801|Clostridia L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner gyrB - 5.99.1.3 ko:K02470 - - - - ko00000,ko01000,ko03032,ko03400 - - - DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim HSJS2_k127_1957738_2 1313421.JHBV01000039_gene2728 1.314e-37 147.0 294EW@1|root,2ZRUR@2|Bacteria,4NPA3@976|Bacteroidetes 976|Bacteroidetes S Protein of unknown function (DUF1569) - - - - - - - - - - - - DUF1569 HSJS2_k127_1957738_0 1124780.ANNU01000023_gene3139 1.057e-55 201.0 COG0590@1|root,COG0590@2|Bacteria,4NNMU@976|Bacteroidetes,47PPK@768503|Cytophagia 976|Bacteroidetes FJ MafB19-like deaminase guaD - 3.5.4.3 ko:K01487 ko00230,ko01100,map00230,map01100 - R01676 RC00204 ko00000,ko00001,ko01000 - - - MafB19-deam,dCMP_cyt_deam_1 HSJS2_k127_1957738_1 926566.Terro_0850 9.697e-50 186.0 COG1529@1|root,COG1529@2|Bacteria,3Y6BF@57723|Acidobacteria 57723|Acidobacteria C aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - 1.2.5.3 ko:K03520 - - R11168 RC02800 ko00000,ko01000 - - - Ald_Xan_dh_C,Ald_Xan_dh_C2 HSJS2_k127_1979927_4 693977.Deipr_0785 2.087e-05 57.0 COG0515@1|root,COG3391@1|root,COG0515@2|Bacteria,COG3391@2|Bacteria,1WIDK@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus KLT Serine threonine protein kinase - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - NHL,Pkinase HSJS2_k127_1979927_3 714943.Mucpa_3894 2.577e-13 82.0 2C7TI@1|root,2Z9KQ@2|Bacteria,4NJ91@976|Bacteroidetes,1IU4F@117747|Sphingobacteriia 976|Bacteroidetes - - - - - - - - - - - - - - - HSJS2_k127_1979927_2 1379270.AUXF01000004_gene2995 9.171e-26 113.0 COG2839@1|root,COG2839@2|Bacteria,1ZUVE@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Protein of unknown function (DUF456) - - - ko:K09793 - - - - ko00000 - - - DUF456 HSJS2_k127_1979927_1 118166.JH976537_gene2038 7.636e-74 253.0 COG2818@1|root,COG2818@2|Bacteria,1G5Y1@1117|Cyanobacteria,1HF1X@1150|Oscillatoriales 1117|Cyanobacteria L Methyladenine glycosylase - - 3.2.2.20 ko:K01246 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Adenine_glyco HSJS2_k127_1979927_0 102232.GLO73106DRAFT_00015860 1.48e-146 479.0 COG0405@1|root,COG0405@2|Bacteria,1G20A@1117|Cyanobacteria 1117|Cyanobacteria E PFAM Gamma-glutamyltranspeptidase - - 2.3.2.2,3.4.19.13 ko:K00681 ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100 - R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935 RC00064,RC00090,RC00096 ko00000,ko00001,ko01000,ko01002 - - - G_glu_transpept HSJS2_k127_198395_1 1089552.KI911559_gene3510 1.486e-52 204.0 COG1120@1|root,COG1120@2|Bacteria,1MWPV@1224|Proteobacteria,2TRCW@28211|Alphaproteobacteria,2JRK2@204441|Rhodospirillales 204441|Rhodospirillales HP ATPases associated with a variety of cellular activities - - 3.6.3.34 ko:K02013 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.14 - - ABC_tran HSJS2_k127_198395_0 379066.GAU_0496 1.787e-54 199.0 COG0609@1|root,COG0609@2|Bacteria,1ZTAA@142182|Gemmatimonadetes 2|Bacteria P FecCD transport family btuC - 3.6.3.34 ko:K02013,ko:K02015 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.14 - - FecCD HSJS2_k127_2010290_3 1203190.CAJP01000031_gene1096 7.891e-25 109.0 COG0126@1|root,COG0126@2|Bacteria,2GJC6@201174|Actinobacteria,22JPV@1653|Corynebacteriaceae 201174|Actinobacteria F Belongs to the phosphoglycerate kinase family pgk GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044464,GO:0071944 2.7.2.3,5.3.1.1 ko:K00927,ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01015,R01512 RC00002,RC00043,RC00423 ko00000,ko00001,ko00002,ko01000,ko04147 - - - PGK HSJS2_k127_2010290_0 1379270.AUXF01000006_gene212 1.783e-140 454.0 COG0057@1|root,COG0057@2|Bacteria,1ZSTF@142182|Gemmatimonadetes 142182|Gemmatimonadetes G Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain - - 1.2.1.12 ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01061 RC00149 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 - - - Gp_dh_C,Gp_dh_N HSJS2_k127_2010290_4 861299.J421_3311 4.549e-23 116.0 COG1040@1|root,COG1040@2|Bacteria,1ZTS5@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Phosphoribosyl transferase domain - - - - - - - - - - - - Pribosyltran HSJS2_k127_2010290_1 266117.Rxyl_1362 5.52e-42 165.0 COG0169@1|root,COG0169@2|Bacteria,2GPQQ@201174|Actinobacteria,4CQ8W@84995|Rubrobacteria 84995|Rubrobacteria E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) aroE - 1.1.1.25 ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02413 RC00206 ko00000,ko00001,ko00002,ko01000 - - - Shikimate_DH,Shikimate_dh_N HSJS2_k127_2010290_2 379066.GAU_1682 1.647e-27 122.0 COG0394@1|root,COG0394@2|Bacteria,1ZTSE@142182|Gemmatimonadetes 142182|Gemmatimonadetes T Low molecular weight phosphatase family - - 3.1.3.48 ko:K01104 - - - - ko00000,ko01000 - - - LMWPc HSJS2_k127_2010290_5 525245.HMPREF0044_0874 1.095e-08 61.0 COG0009@1|root,COG0009@2|Bacteria,2GK2X@201174|Actinobacteria,4D3PC@85005|Actinomycetales 201174|Actinobacteria J Belongs to the SUA5 family - - 2.7.7.87 ko:K07566 - - R10463 RC00745 ko00000,ko01000,ko03009,ko03016 - - - Sua5_yciO_yrdC HSJS2_k127_201856_2 861299.J421_1779 2.332e-42 166.0 COG1538@1|root,COG1538@2|Bacteria 2|Bacteria MU efflux transmembrane transporter activity - - - - - - - - - - - - OEP HSJS2_k127_201856_1 861299.J421_1778 1.942e-66 240.0 COG1566@1|root,COG1566@2|Bacteria 2|Bacteria V PFAM secretion protein HlyD family protein - - - ko:K01993,ko:K02005 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 HSJS2_k127_201856_0 861299.J421_1777 5.044e-72 246.0 COG1131@1|root,COG1131@2|Bacteria,1ZTMK@142182|Gemmatimonadetes 2|Bacteria V AAA domain, putative AbiEii toxin, Type IV TA system - - - ko:K01990,ko:K13926 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HSJS2_k127_203138_4 1227497.C491_04165 4.844e-80 274.0 COG1024@1|root,arCOG00239@2157|Archaea,2XTF0@28890|Euryarchaeota,23SMM@183963|Halobacteria 183963|Halobacteria I Belongs to the enoyl-CoA hydratase isomerase family ech4 - 4.2.1.17 ko:K01715 ko00650,ko01200,map00650,map01200 - R03026 RC00831 ko00000,ko00001,ko01000 - - - ECH_1 HSJS2_k127_203138_3 1448860.BBJO01000014_gene1290 4.188e-98 329.0 COG1250@1|root,arCOG00250@2157|Archaea,2XT9S@28890|Euryarchaeota,23TDY@183963|Halobacteria 183963|Halobacteria I 3-hydroxyacyl-CoA dehydrogenase hbd3 - 1.1.1.157 ko:K00074 ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120 - R01976,R05576,R06941 RC00029,RC00117 ko00000,ko00001,ko01000 - - - 3HCDH,3HCDH_N HSJS2_k127_203138_6 996637.SGM_0825 0.0003054 51.0 COG0454@1|root,COG0456@2|Bacteria,2GQGN@201174|Actinobacteria 201174|Actinobacteria K acetyltransferase - - - - - - - - - - - - Acetyltransf_1 HSJS2_k127_203138_5 1382304.JNIL01000001_gene2953 4.286e-61 228.0 COG1024@1|root,COG1024@2|Bacteria,1TQ2V@1239|Firmicutes,4HBT0@91061|Bacilli,279HF@186823|Alicyclobacillaceae 91061|Bacilli I Enoyl-CoA hydratase/isomerase paaG - 5.3.3.18 ko:K15866 ko00360,ko01120,map00360,map01120 - R09837,R09839 RC00004,RC00326,RC02689,RC03003 ko00000,ko00001,ko01000 - - - ECH_1 HSJS2_k127_203138_1 562970.Btus_1243 5.883e-155 501.0 COG0183@1|root,COG0183@2|Bacteria,1TP07@1239|Firmicutes,4H9RJ@91061|Bacilli,277YV@186823|Alicyclobacillaceae 91061|Bacilli I Belongs to the thiolase family pcaF - 2.3.1.174,2.3.1.223,2.3.1.9 ko:K00626,ko:K02615 ko00071,ko00072,ko00280,ko00310,ko00360,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00360,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 M00088,M00095,M00373,M00374,M00375 R00238,R00829,R01177,R09839 RC00004,RC00326,RC03003 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Thiolase_C,Thiolase_N HSJS2_k127_203138_0 1379698.RBG1_1C00001G0805 3.395e-189 606.0 COG1012@1|root,COG1012@2|Bacteria,2NNWB@2323|unclassified Bacteria 2|Bacteria C Belongs to the aldehyde dehydrogenase family aldH - 1.2.1.3 ko:K00128,ko:K00138 ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130 M00135 R00264,R00631,R00710,R00711,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146 RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500 ko00000,ko00001,ko00002,ko01000 - - - Aldedh HSJS2_k127_203138_2 1379698.RBG1_1C00001G0806 4.135e-117 384.0 COG1024@1|root,COG1024@2|Bacteria,2NPAC@2323|unclassified Bacteria 2|Bacteria I Belongs to the enoyl-CoA hydratase isomerase family - - 4.2.1.17 ko:K01715 ko00650,ko01200,map00650,map01200 - R03026 RC00831 ko00000,ko00001,ko01000 - - - ECH_1 HSJS2_k127_2060188_1 1125863.JAFN01000001_gene1010 1.458e-116 390.0 COG0534@1|root,COG0534@2|Bacteria,1R3WH@1224|Proteobacteria,42Q54@68525|delta/epsilon subdivisions,2WM10@28221|Deltaproteobacteria 28221|Deltaproteobacteria V Mate efflux family protein - - - - - - - - - - - - - HSJS2_k127_2060188_0 309807.SRU_1156 1.13e-160 536.0 COG5276@1|root,COG5276@2|Bacteria,4NDUD@976|Bacteroidetes,1FIMC@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes S repeat protein - - - - - - - - - - - - CarboxypepD_reg,LVIVD,MAM,TSP_3,fn3 HSJS2_k127_2060188_2 1385935.N836_09725 1.125e-42 167.0 COG2267@1|root,COG2267@2|Bacteria,1G0AC@1117|Cyanobacteria,1HHSQ@1150|Oscillatoriales 1117|Cyanobacteria I Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) menH - 4.2.99.20 ko:K08680 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R08166 RC02148,RC02475 ko00000,ko00001,ko00002,ko01000 - - - Abhydrolase_1,Abhydrolase_6 HSJS2_k127_2060188_3 40571.JOEA01000014_gene1746 1.878e-24 108.0 COG3795@1|root,COG3795@2|Bacteria,2IQMR@201174|Actinobacteria,4E4JZ@85010|Pseudonocardiales 201174|Actinobacteria S YCII-related domain - - - - - - - - - - - - YCII HSJS2_k127_2063538_4 1367847.JCM7686_2882 1.035e-06 59.0 COG0436@1|root,COG0436@2|Bacteria,1MW0Z@1224|Proteobacteria,2TRPK@28211|Alphaproteobacteria,2PVHY@265|Paracoccus 28211|Alphaproteobacteria E Catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate aatA - 2.6.1.1 ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 - R00355,R00694,R00734,R00896,R02433,R02619,R05052 RC00006 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 HSJS2_k127_2063538_3 929712.KI912613_gene1907 4.215e-09 63.0 COG0314@1|root,COG0315@1|root,COG0314@2|Bacteria,COG0315@2|Bacteria,2IHR6@201174|Actinobacteria,4CU2W@84995|Rubrobacteria 84995|Rubrobacteria H MoaE protein - - - - - - - - - - - - MoaC,MoaE,ThiS HSJS2_k127_2063538_2 1480694.DC28_13815 7.447e-28 122.0 COG0314@1|root,COG0314@2|Bacteria 2|Bacteria H molybdopterin synthase activity moaE GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016782,GO:0016783,GO:0018130,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0030366,GO:0032324,GO:0034641,GO:0042278,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.7.7.80,2.8.1.11,2.8.1.12 ko:K03635,ko:K21147 ko00790,ko01100,ko04122,map00790,map01100,map04122 - R07459,R07461,R09395 RC00043,RC02507 ko00000,ko00001,ko01000 - - - MoCF_biosynth,MoaE HSJS2_k127_2063538_1 379066.GAU_1671 6.595e-113 381.0 COG2896@1|root,COG2896@2|Bacteria,1ZSMN@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate moaA - 4.1.99.22 ko:K03639 ko00790,ko01100,ko04122,map00790,map01100,map04122 - R09394 RC03420 ko00000,ko00001,ko01000 - - - Fer4_12,Mob_synth_C,Radical_SAM HSJS2_k127_2063538_0 861299.J421_3301 5.373e-129 420.0 COG0039@1|root,COG0039@2|Bacteria,1ZSV3@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Catalyzes the reversible oxidation of malate to oxaloacetate mdh - 1.1.1.37 ko:K00024 ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00012,M00168,M00173,M00346,M00374,M00620,M00740 R00342,R07136 RC00031 ko00000,ko00001,ko00002,ko01000 - - - Ldh_1_C,Ldh_1_N HSJS2_k127_2081192_2 1379270.AUXF01000005_gene524 1.451e-44 173.0 COG0193@1|root,COG0193@2|Bacteria,1ZTKT@142182|Gemmatimonadetes 142182|Gemmatimonadetes J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis pth - 3.1.1.29 ko:K01056 - - - - ko00000,ko01000,ko03012 - - - Pept_tRNA_hydro HSJS2_k127_2081192_3 574087.Acear_0089 2.896e-40 158.0 COG1825@1|root,COG1825@2|Bacteria,1VA38@1239|Firmicutes,24N24@186801|Clostridia,3WBPT@53433|Halanaerobiales 186801|Clostridia J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance ctc - - ko:K02897 ko03010,map03010 M00178 - - ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L25p,Ribosomal_TL5_C HSJS2_k127_2081192_0 1379270.AUXF01000005_gene526 1.036e-127 417.0 COG0462@1|root,COG0462@2|Bacteria,1ZT7Q@142182|Gemmatimonadetes 142182|Gemmatimonadetes F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) prs - 2.7.6.1 ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 M00005 R01049 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - Pribosyl_synth,Pribosyltran_N HSJS2_k127_2081192_1 309807.SRU_1548 1.61e-65 233.0 COG1331@1|root,COG1331@2|Bacteria,4NFE2@976|Bacteroidetes,1FIJF@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes O Protein of unknown function, DUF255 - - - ko:K06888 - - - - ko00000 - - - GlcNAc_2-epim,Thioredox_DsbH HSJS2_k127_20847_3 555079.Toce_2107 3.758e-36 138.0 COG0050@1|root,COG0050@2|Bacteria,1TPKC@1239|Firmicutes,2485I@186801|Clostridia,42EPJ@68295|Thermoanaerobacterales 186801|Clostridia J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis tuf - - ko:K02358 - - - - ko00000,ko03012,ko03029,ko04147 - - - GTP_EFTU,GTP_EFTU_D2,GTP_EFTU_D3 HSJS2_k127_20847_0 469378.Ccur_10040 2.847e-287 897.0 COG0480@1|root,COG0480@2|Bacteria,2GKB3@201174|Actinobacteria,4CU9M@84998|Coriobacteriia 84998|Coriobacteriia J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome fusA - - ko:K02355 - - - - ko00000,ko03012,ko03029 - - - EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2 HSJS2_k127_20847_2 861299.J421_2770 2.88e-55 200.0 COG0049@1|root,COG0049@2|Bacteria,1ZSQZ@142182|Gemmatimonadetes 142182|Gemmatimonadetes J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA rpsG - - ko:K02992 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S7 HSJS2_k127_20847_1 880073.Calab_2121 7.45e-64 220.0 COG0048@1|root,COG0048@2|Bacteria,2NPA7@2323|unclassified Bacteria 2|Bacteria J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit rpsL GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02950 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosom_S12_S23 HSJS2_k127_2100405_2 1051632.TPY_0230 3.669e-11 65.0 COG0054@1|root,COG0054@2|Bacteria,1V1DA@1239|Firmicutes,24FRS@186801|Clostridia 186801|Clostridia H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin ribH - 2.5.1.78 ko:K00794 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R04457 RC00960 ko00000,ko00001,ko00002,ko01000 - - - DMRL_synthase HSJS2_k127_2100405_1 483219.LILAB_31755 1.299e-24 111.0 COG0781@1|root,COG0781@2|Bacteria,1N94P@1224|Proteobacteria,42SEA@68525|delta/epsilon subdivisions,2WQP9@28221|Deltaproteobacteria,2YVKR@29|Myxococcales 28221|Deltaproteobacteria K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons nusB - - ko:K03625 - - - - ko00000,ko03009,ko03021 - - - NusB HSJS2_k127_2100405_0 861299.J421_3119 1.986e-114 388.0 COG0438@1|root,COG0438@2|Bacteria,1ZTBC@142182|Gemmatimonadetes 142182|Gemmatimonadetes M Glycosyl transferases group 1 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 HSJS2_k127_2114749_7 1070774.J07HN4v3_01661 5.352e-07 53.0 COG0438@1|root,arCOG01407@2157|Archaea,2Y8BB@28890|Euryarchaeota,24180@183963|Halobacteria 183963|Halobacteria M Glycosyl transferases group 1 - - - - - - - - - - - - Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1 HSJS2_k127_2114749_6 1042377.AFPJ01000034_gene2327 7.425e-09 61.0 COG1544@1|root,COG1544@2|Bacteria,1MZHW@1224|Proteobacteria,1S8U1@1236|Gammaproteobacteria,467QQ@72275|Alteromonadaceae 1236|Gammaproteobacteria J COG1544 Ribosome-associated protein Y (PSrp-1) yhbH GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:1990904,GO:2000112,GO:2000113 - ko:K05808 - - - - ko00000,ko03009 - - - Ribosomal_S30AE HSJS2_k127_2114749_0 379066.GAU_1477 4.929e-111 376.0 COG1493@1|root,COG1493@2|Bacteria,1ZSY3@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) hprK - - ko:K06023 - - - - ko00000,ko01000 - - - Hpr_kinase_C,Hpr_kinase_N HSJS2_k127_2114749_8 398767.Glov_2162 1.37e-06 61.0 COG2893@1|root,COG2893@2|Bacteria,1RHH7@1224|Proteobacteria,42SST@68525|delta/epsilon subdivisions,2WPWN@28221|Deltaproteobacteria 28221|Deltaproteobacteria G PFAM PTS system fructose subfamily IIA component - - 2.7.1.191 ko:K02793 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 M00276 R02630 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.6.1 - - EIIA-man HSJS2_k127_2114749_2 379066.GAU_1479 1.116e-34 140.0 COG3444@1|root,COG3444@2|Bacteria,1ZTQR@142182|Gemmatimonadetes 142182|Gemmatimonadetes G PTS system sorbose subfamily IIB component - - - ko:K19507 ko02060,map02060 M00764 - - ko00000,ko00001,ko00002,ko01000,ko02000 4.A.6.1.19 - - PTSIIB_sorb HSJS2_k127_2114749_5 861299.J421_3124 1.631e-13 79.0 COG3715@1|root,COG3715@2|Bacteria,1ZTVH@142182|Gemmatimonadetes 142182|Gemmatimonadetes G PTS system sorbose-specific iic component - - - ko:K02795 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 M00276 R02630 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.6.1 - - EII-Sor HSJS2_k127_2114749_1 379066.GAU_1481 9.739e-37 156.0 COG3716@1|root,COG3716@2|Bacteria,1ZTJH@142182|Gemmatimonadetes 142182|Gemmatimonadetes G PTS system mannose/fructose/sorbose family IID component - - - ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 M00276 R02630 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.6.1 - - EIID-AGA HSJS2_k127_2114749_3 861299.J421_3126 3.424e-24 105.0 COG1925@1|root,COG1925@2|Bacteria,1ZTYE@142182|Gemmatimonadetes 142182|Gemmatimonadetes G PTS HPr component phosphorylation site - - - ko:K11189 - - - - ko00000,ko02000 4.A.2.1 - - PTS-HPr HSJS2_k127_2114749_4 1122130.AUHN01000006_gene1957 1.341e-13 79.0 COG1080@1|root,COG1080@2|Bacteria,2GIZZ@201174|Actinobacteria 201174|Actinobacteria G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) ptsI - 2.7.3.9 ko:K08483 ko02060,map02060 - - - ko00000,ko00001,ko01000,ko02000 8.A.7 - - PEP-utilisers_N,PEP-utilizers,PEP-utilizers_C HSJS2_k127_2121786_0 903818.KI912269_gene537 6.54e-129 419.0 COG1164@1|root,COG1164@2|Bacteria 2|Bacteria E metalloendopeptidase activity pepF GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006465,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - ko:K08602 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M3,Peptidase_M3_N HSJS2_k127_2121786_3 550540.Fbal_0938 1.104e-07 61.0 COG2913@1|root,COG2913@2|Bacteria,1NAIV@1224|Proteobacteria,1SD2R@1236|Gammaproteobacteria 1236|Gammaproteobacteria J Protein of unknown function (DUF3192) - - - - - - - - - - - - DUF3192 HSJS2_k127_2121786_1 392500.Swoo_3603 1.054e-125 428.0 COG2195@1|root,COG2195@2|Bacteria,1MUWK@1224|Proteobacteria,1RP5F@1236|Gammaproteobacteria,2QA2A@267890|Shewanellaceae 1236|Gammaproteobacteria E peptidase dimerisation domain protein pepD GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0008270,GO:0009056,GO:0009987,GO:0016787,GO:0016805,GO:0019538,GO:0034641,GO:0043167,GO:0043169,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0070573,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - ko:K01270 ko00480,ko01100,map00480,map01100 - R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 - - iPC815.YPO3230,iSBO_1134.SBO_0243 M20_dimer,Peptidase_M20 HSJS2_k127_2121786_2 518766.Rmar_1754 5.264e-79 286.0 COG0457@1|root,COG0457@2|Bacteria 518766.Rmar_1754|- S peptidyl-tyrosine sulfation - - - - - - - - - - - - - HSJS2_k127_2127025_0 880073.Calab_3349 3.679e-112 378.0 COG0457@1|root,COG0457@2|Bacteria 880073.Calab_3349|- S peptidyl-tyrosine sulfation - - - - - - - - - - - - - HSJS2_k127_2127025_1 1313172.YM304_22760 6.374e-107 359.0 COG0861@1|root,COG0861@2|Bacteria,2GIWU@201174|Actinobacteria 201174|Actinobacteria P membrane protein terC - - - ko:K05794 - - - - ko00000 - - - TerC HSJS2_k127_2127025_2 869210.Marky_1642 2.572e-35 136.0 COG3033@1|root,COG3033@2|Bacteria,1WM62@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus E PFAM aromatic amino acid beta-eliminating lyase threonine aldolase tnaA - 4.1.99.1 ko:K01667 ko00380,map00380 - R00673 RC00209,RC00355 ko00000,ko00001,ko01000 - - - Beta_elim_lyase HSJS2_k127_2137981_10 1278073.MYSTI_04691 1.714e-35 142.0 COG1138@1|root,COG1138@2|Bacteria,1MUQS@1224|Proteobacteria,42P4Q@68525|delta/epsilon subdivisions,2WK5G@28221|Deltaproteobacteria,2YU4N@29|Myxococcales 28221|Deltaproteobacteria O Cytochrome c-type biogenesis protein ccmF - - ko:K02198 - - - - ko00000,ko02000 9.B.14.1 - - CcmF_C,Cytochrom_C_asm HSJS2_k127_2137981_11 751945.Theos_1608 1.193e-33 134.0 COG2332@1|root,COG2332@2|Bacteria,1WJVR@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus O Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH ccmE - - ko:K02197 - - - - ko00000 - - - CcmE HSJS2_k127_2137981_6 196162.Noca_1955 7.029e-67 234.0 COG0755@1|root,COG0755@2|Bacteria,2IIHK@201174|Actinobacteria 201174|Actinobacteria O cytochrome C assembly protein - - - ko:K02195 ko02010,map02010 M00259 - - ko00000,ko00001,ko00002,ko02000 3.A.1.107 - - Cytochrom_C_asm HSJS2_k127_2137981_8 1278073.MYSTI_04687 1.959e-46 183.0 COG2386@1|root,COG2386@2|Bacteria,1QF23@1224|Proteobacteria,42RAM@68525|delta/epsilon subdivisions,2WMS1@28221|Deltaproteobacteria,2YVDV@29|Myxococcales 28221|Deltaproteobacteria U Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes ccmB - - ko:K02194 ko02010,map02010 M00259 - - ko00000,ko00001,ko00002,ko02000 3.A.1.107 - - CcmB HSJS2_k127_2137981_9 649638.Trad_0419 1.042e-43 167.0 COG1131@1|root,COG1131@2|Bacteria,1WI8V@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus V ABC-type multidrug transport system ATPase component - - 3.6.3.41 ko:K02193 ko02010,map02010 M00259 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.107 - - ABC_tran HSJS2_k127_2137981_2 344747.PM8797T_10544 7.03e-112 378.0 COG3635@1|root,COG3635@2|Bacteria,2IY5S@203682|Planctomycetes 203682|Planctomycetes G phosphoglycerate mutase - - 5.4.2.12 ko:K15635 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000 - - - Metalloenzyme,PhosphMutase HSJS2_k127_2137981_12 861299.J421_0446 3.649e-26 121.0 2F3M0@1|root,33WE8@2|Bacteria,1ZTTF@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_2137981_0 572479.Hprae_1413 1.015e-232 744.0 COG2217@1|root,COG2217@2|Bacteria,1TP5S@1239|Firmicutes,247MW@186801|Clostridia,3WB5V@53433|Halanaerobiales 186801|Clostridia P ATPase, P-type (transporting), HAD superfamily, subfamily IC copA - 3.6.3.4,3.6.3.54 ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 - R00086 RC00002 ko00000,ko00001,ko01000 3.A.3.5 - - E1-E2_ATPase,HMA,Hydrolase HSJS2_k127_2137981_15 379066.GAU_0754 1.805e-08 64.0 2FDPQ@1|root,345QV@2|Bacteria,1ZU3Q@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_2137981_14 1278306.KB906913_gene924 1.914e-10 63.0 COG1226@1|root,COG3273@1|root,COG1226@2|Bacteria,COG3273@2|Bacteria,37C35@32066|Fusobacteria 32066|Fusobacteria P Ion channel - - - ko:K10716 - - - - ko00000,ko02000 1.A.1.1,1.A.1.13,1.A.1.17,1.A.1.24,1.A.1.25,1.A.1.6 - - Ion_trans_2,TrkA_C,TrkA_N HSJS2_k127_2137981_7 1499967.BAYZ01000016_gene6507 1.668e-57 209.0 COG1226@1|root,COG1226@2|Bacteria,2NP71@2323|unclassified Bacteria 2|Bacteria U Ion channel kch - - ko:K10716 - - - - ko00000,ko02000 1.A.1.1,1.A.1.13,1.A.1.17,1.A.1.24,1.A.1.25,1.A.1.6 - - Ion_trans_2,TrkA_C,TrkA_N HSJS2_k127_2137981_13 710111.FraQA3DRAFT_4463 2.369e-25 122.0 COG0513@1|root,COG0513@2|Bacteria,2GIUR@201174|Actinobacteria 201174|Actinobacteria L Belongs to the DEAD box helicase family deaD GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030312,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 ko:K05592,ko:K11927 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03009,ko03019 - - - DEAD,DbpA,Helicase_C HSJS2_k127_2137981_3 42256.RradSPS_0888 2.373e-109 370.0 COG1115@1|root,COG1115@2|Bacteria,2GIU2@201174|Actinobacteria 201174|Actinobacteria E amino acid carrier protein alaP - - ko:K03310 - - - - ko00000 2.A.25 - - Na_Ala_symp HSJS2_k127_2137981_4 379066.GAU_0192 2.252e-96 329.0 COG0075@1|root,COG0075@2|Bacteria,1ZTF3@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Aminotransferase class-V - - - - - - - - - - - - Aminotran_5 HSJS2_k127_2137981_1 1089548.KI783301_gene1217 2.398e-129 433.0 COG0111@1|root,COG0111@2|Bacteria,1V410@1239|Firmicutes,4H9PH@91061|Bacilli 91061|Bacilli EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family serA - 1.1.1.399,1.1.1.95 ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R01513 RC00031 ko00000,ko00001,ko00002,ko01000,ko04147 - - iYO844.BSU23070 2-Hacid_dh,2-Hacid_dh_C,ACT HSJS2_k127_2137981_5 1382359.JIAL01000001_gene1431 1.424e-87 296.0 COG0476@1|root,COG0476@2|Bacteria,3Y3IF@57723|Acidobacteria,2JIPC@204432|Acidobacteriia 204432|Acidobacteriia HP PFAM UBA THIF-type NAD FAD binding - - 2.7.7.80,2.8.1.11 ko:K21147 ko04122,map04122 - R07459,R07461 RC00043 ko00000,ko00001,ko01000 - - - Rhodanese,ThiF,ThiS HSJS2_k127_2143908_0 861299.J421_2042 6.518e-226 709.0 COG0308@1|root,COG0308@2|Bacteria,1ZU50@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Peptidase family M1 domain - - - - - - - - - - - - Peptidase_M1 HSJS2_k127_2143908_3 1231190.NA8A_16171 2.698e-71 253.0 COG1028@1|root,COG1028@2|Bacteria,1MW9A@1224|Proteobacteria,2TRFW@28211|Alphaproteobacteria,43I3E@69277|Phyllobacteriaceae 28211|Alphaproteobacteria IQ with different specificities (related to short-chain alcohol ygfF - - - - - - - - - - - adh_short_C2 HSJS2_k127_2143908_2 1231190.NA8A_16166 2.454e-71 264.0 COG1028@1|root,COG1028@2|Bacteria 1231190.NA8A_16166|- IQ oxidoreductase activity, acting on CH-OH group of donors - - - - - - - - - - - - - HSJS2_k127_2143908_1 1123253.AUBD01000005_gene136 3.063e-116 387.0 COG1972@1|root,COG1972@2|Bacteria,1MXXX@1224|Proteobacteria,1RMBX@1236|Gammaproteobacteria,1X3AE@135614|Xanthomonadales 135614|Xanthomonadales F Na dependent nucleoside transporter yeiM - - ko:K03317 - - - - ko00000 2.A.41 - - Gate,Nucleos_tra2_C,Nucleos_tra2_N HSJS2_k127_2174490_0 379066.GAU_2797 6.985e-199 630.0 COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,1ZT89@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Transketolase, pyrimidine binding domain - - 1.2.4.4 ko:K11381 ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130 M00036 R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997 RC00027,RC00627,RC02743,RC02883,RC02949,RC02953 br01601,ko00000,ko00001,ko00002,ko01000 - - - E1_dh,Transket_pyr,Transketolase_C HSJS2_k127_2194433_0 1499686.BN1079_01671 1.005e-66 239.0 COG0530@1|root,COG0530@2|Bacteria,1MU3R@1224|Proteobacteria,1RMRD@1236|Gammaproteobacteria 1236|Gammaproteobacteria P antiporter - - - ko:K07301 - - - - ko00000,ko02000 2.A.19.5 - - Na_Ca_ex HSJS2_k127_2194433_2 323261.Noc_2206 8.316e-09 59.0 COG2002@1|root,COG2002@2|Bacteria 2|Bacteria K toxin-antitoxin pair type II binding - - - - - - - - - - - - MazE_antitoxin HSJS2_k127_2194433_3 1174528.JH992898_gene946 1.659e-07 60.0 COG1848@1|root,COG1848@2|Bacteria,1G64R@1117|Cyanobacteria,1JJG4@1189|Stigonemataceae 1117|Cyanobacteria S PIN domain - - - - - - - - - - - - PIN HSJS2_k127_2194433_1 1283299.AUKG01000001_gene3257 1.968e-21 102.0 COG4198@1|root,COG4198@2|Bacteria,2GJFV@201174|Actinobacteria,4CS23@84995|Rubrobacteria 84995|Rubrobacteria S Protein of unknown function (DUF1015) - - - - - - - - - - - - DUF1015 HSJS2_k127_2218244_2 861299.J421_3954 2.249e-25 124.0 2C0MY@1|root,30KW5@2|Bacteria,1ZTVN@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_2218244_0 224324.aq_035 3.408e-33 147.0 COG2199@1|root,COG3706@2|Bacteria,2G439@200783|Aquificae 200783|Aquificae T Diguanylate cyclase - - - - - - - - - - - - GGDEF,Lactamase_B HSJS2_k127_2218244_1 518766.Rmar_1790 3.808e-29 129.0 COG1228@1|root,COG1228@2|Bacteria,4NEV0@976|Bacteroidetes 976|Bacteroidetes Q Pfam Amidohydrolase - - - - - - - - - - - - Amidohydro_1 HSJS2_k127_2227946_6 379066.GAU_0765 1.964e-43 179.0 COG0237@1|root,COG0237@2|Bacteria,1ZTM2@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A coaE - 2.7.1.24 ko:K00859 ko00770,ko01100,map00770,map01100 M00120 R00130 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - CoaE HSJS2_k127_2227946_2 378806.STAUR_5126 4.153e-71 257.0 COG0618@1|root,COG0618@2|Bacteria,1N0JS@1224|Proteobacteria,42P1S@68525|delta/epsilon subdivisions,2WJV0@28221|Deltaproteobacteria,2YYAS@29|Myxococcales 28221|Deltaproteobacteria S DHH family - - - - - - - - - - - - DHH,DHHA1 HSJS2_k127_2227946_3 1125863.JAFN01000001_gene1846 4.331e-55 200.0 COG0491@1|root,COG0491@2|Bacteria,1MUDN@1224|Proteobacteria,42QWD@68525|delta/epsilon subdivisions,2WN14@28221|Deltaproteobacteria 28221|Deltaproteobacteria S beta-lactamase domain protein ycbL - - - - - - - - - - - Lactamase_B HSJS2_k127_2227946_7 1379270.AUXF01000003_gene3855 1.205e-39 150.0 COG0316@1|root,COG0316@2|Bacteria,1ZTT0@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Iron-sulphur cluster biosynthesis - - - - - - - - - - - - Fe-S_biosyn HSJS2_k127_2227946_0 237368.SCABRO_02752 1.7e-130 426.0 COG0492@1|root,COG0492@2|Bacteria,2IX3E@203682|Planctomycetes 203682|Planctomycetes C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family trxB - 1.8.1.9 ko:K00384 ko00450,map00450 - R02016,R03596,R09372 RC00013,RC02518,RC02873 ko00000,ko00001,ko01000 - - - Pyr_redox_2 HSJS2_k127_2227946_5 264732.Moth_1085 1.872e-53 198.0 COG0613@1|root,COG0613@2|Bacteria,1TPI5@1239|Firmicutes,248H2@186801|Clostridia,42GGH@68295|Thermoanaerobacterales 186801|Clostridia S SMART phosphoesterase PHP domain protein - - 3.1.3.97 ko:K07053 - - R00188,R11188 RC00078 ko00000,ko01000 - - - PHP HSJS2_k127_2227946_4 861299.J421_4361 1.168e-54 200.0 COG1321@1|root,COG1918@1|root,COG1321@2|Bacteria,COG1918@2|Bacteria,1ZTHJ@142182|Gemmatimonadetes 142182|Gemmatimonadetes K Helix-turn-helix diphteria tox regulatory element - - - ko:K03709 - - - - ko00000,ko03000 - - - Fe_dep_repr_C,Fe_dep_repress,FeoA HSJS2_k127_2227946_1 266117.Rxyl_0738 5.412e-107 362.0 COG1363@1|root,COG1363@2|Bacteria,2ID5X@201174|Actinobacteria,4CP5U@84995|Rubrobacteria 84995|Rubrobacteria G peptidase M42 - - - - - - - - - - - - Peptidase_M42 HSJS2_k127_2227946_8 237368.SCABRO_03984 4.127e-06 48.0 COG1595@1|root,COG1595@2|Bacteria,2J0Q0@203682|Planctomycetes 203682|Planctomycetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 HSJS2_k127_222873_0 1191523.MROS_1496 5.382e-105 356.0 COG0612@1|root,COG0612@2|Bacteria 2|Bacteria L Peptidase, M16 - - - ko:K07263 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M16,Peptidase_M16_C HSJS2_k127_222873_3 760117.JN27_17805 6.732e-66 245.0 COG0612@1|root,COG0612@2|Bacteria,1MVST@1224|Proteobacteria,2VHVB@28216|Betaproteobacteria,472VG@75682|Oxalobacteraceae 28216|Betaproteobacteria S Insulinase (Peptidase family M16) - - - ko:K07263 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M16,Peptidase_M16_C HSJS2_k127_222873_4 861299.J421_0908 5.859e-45 185.0 COG0494@1|root,COG0494@2|Bacteria,1ZTQ5@142182|Gemmatimonadetes 142182|Gemmatimonadetes L NUDIX domain - - 3.6.1.13 ko:K01515 ko00230,map00230 - R01054 RC00002 ko00000,ko00001,ko01000 - - - NUDIX HSJS2_k127_222873_2 861299.J421_0907 7.892e-87 291.0 COG1595@1|root,COG1595@2|Bacteria,1ZT2V@142182|Gemmatimonadetes 142182|Gemmatimonadetes K ECF sigma factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 HSJS2_k127_222873_6 278963.ATWD01000001_gene4341 0.000417 49.0 COG5660@1|root,COG5660@2|Bacteria,3Y5KK@57723|Acidobacteria,2JJW4@204432|Acidobacteriia 204432|Acidobacteriia S Putative zinc-finger - - - - - - - - - - - - zf-HC2 HSJS2_k127_222873_5 1433126.BN938_2762 7.835e-12 76.0 COG1466@1|root,COG1466@2|Bacteria,4NEIB@976|Bacteroidetes,2FNY6@200643|Bacteroidia,22U25@171550|Rikenellaceae 976|Bacteroidetes L DNA polymerase III, delta' subunit holA - 2.7.7.7 ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_delta HSJS2_k127_222873_1 379066.GAU_3911 1.035e-97 339.0 COG0249@1|root,COG0249@2|Bacteria,1ZST5@142182|Gemmatimonadetes 142182|Gemmatimonadetes L that it carries out the mismatch recognition step. This protein has a weak ATPase activity mutS - - ko:K03555 ko03430,map03430 - - - ko00000,ko00001,ko03400 - - - MutS_I,MutS_II,MutS_III,MutS_IV,MutS_V HSJS2_k127_2234415_1 929562.Emtol_0877 9.808e-29 116.0 COG1652@1|root,COG1652@2|Bacteria,4NMED@976|Bacteroidetes,47PVU@768503|Cytophagia 976|Bacteroidetes S Lysin motif - - - - - - - - - - - - BON,LysM HSJS2_k127_2234415_0 1089550.ATTH01000001_gene1477 5.249e-193 629.0 COG5276@1|root,COG5276@2|Bacteria,4NDUD@976|Bacteroidetes,1FIMC@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes S repeat protein - - - - - - - - - - - - CarboxypepD_reg,LVIVD,MAM,TSP_3,fn3 HSJS2_k127_2251896_0 1379270.AUXF01000002_gene1397 7.677e-144 470.0 COG0673@1|root,COG0673@2|Bacteria,1ZSW3@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA HSJS2_k127_2251896_1 159087.Daro_1105 1.355e-55 205.0 COG4886@1|root,COG4886@2|Bacteria 2|Bacteria S regulation of response to stimulus - - - - - - - - - - - - CHU_C,CUB,DUF285,Flg_new,LRR_5,LRR_6,PKD HSJS2_k127_2251896_3 1313172.YM304_40300 4.939e-28 121.0 COG2335@1|root,COG2335@2|Bacteria,2GJC2@201174|Actinobacteria 201174|Actinobacteria M Fasciclin mpt GO:0005575,GO:0005576,GO:0005615,GO:0005623,GO:0005886,GO:0008150,GO:0009605,GO:0009607,GO:0016020,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043207,GO:0044403,GO:0044419,GO:0044421,GO:0044464,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0071944,GO:0075136 - - - - - - - - - - Fasciclin HSJS2_k127_2251896_5 1177594.MIC448_1150009 1.483e-06 52.0 2BD34@1|root,326QM@2|Bacteria,2HC94@201174|Actinobacteria 201174|Actinobacteria - - - - - - - - - - - - - - - HSJS2_k127_2251896_2 1449357.JQLK01000001_gene700 1.175e-31 136.0 COG2199@1|root,COG3706@2|Bacteria,1WIYY@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus T TIGRFAM diguanylate cyclase (GGDEF) domain - - - - - - - - - - - - GGDEF HSJS2_k127_2251896_4 880073.Calab_0547 4.696e-11 76.0 29YZ1@1|root,30KVZ@2|Bacteria,2NRNQ@2323|unclassified Bacteria 2|Bacteria S Capsule assembly protein Wzi - - - - - - - - - - - - Caps_assemb_Wzi HSJS2_k127_2255348_0 1262915.BN574_01701 1.175e-77 271.0 COG1488@1|root,COG1488@2|Bacteria,1TPDW@1239|Firmicutes,4H2WK@909932|Negativicutes 909932|Negativicutes H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP - - 6.3.4.21 ko:K00763 ko00760,ko01100,map00760,map01100 - R01724 RC00033 ko00000,ko00001,ko01000 - - - QRPTase_C,QRPTase_N HSJS2_k127_2255348_2 1379270.AUXF01000001_gene2602 3.871e-27 114.0 COG1278@1|root,COG1278@2|Bacteria,1ZV0Z@142182|Gemmatimonadetes 142182|Gemmatimonadetes K Ribonuclease B OB domain - - - ko:K03704 - - - - ko00000,ko03000 - - - CSD HSJS2_k127_2255348_1 1317122.ATO12_18240 5.73e-48 183.0 COG3844@1|root,COG3844@2|Bacteria,4NECS@976|Bacteroidetes,1HWY8@117743|Flavobacteriia,2YIJE@290174|Aquimarina 976|Bacteroidetes E Aminotransferase class-V kynU - 3.7.1.3 ko:K01556 ko00380,ko01100,map00380,map01100 M00038 R00987,R02668,R03936 RC00284,RC00415 ko00000,ko00001,ko00002,ko01000 - - - Aminotran_5 HSJS2_k127_2266954_0 861299.J421_3434 1.564e-146 482.0 COG0497@1|root,COG0497@2|Bacteria,1ZSV4@142182|Gemmatimonadetes 142182|Gemmatimonadetes L May be involved in recombinational repair of damaged DNA - - - ko:K03631 - - - - ko00000,ko03400 - - - SMC_N HSJS2_k127_2266954_1 379066.GAU_1865 1.099e-68 243.0 COG0061@1|root,COG0061@2|Bacteria,1ZT32@142182|Gemmatimonadetes 142182|Gemmatimonadetes F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP nadK - 2.7.1.23 ko:K00858 ko00760,ko01100,map00760,map01100 - R00104 RC00002,RC00078 ko00000,ko00001,ko01000 - - - NAD_kinase HSJS2_k127_2266954_2 555088.DealDRAFT_0733 0.0001341 45.0 COG0142@1|root,COG0142@2|Bacteria,1TPQY@1239|Firmicutes,248DE@186801|Clostridia,42JTQ@68298|Syntrophomonadaceae 186801|Clostridia H Belongs to the FPP GGPP synthase family ispA - 2.5.1.1,2.5.1.10,2.5.1.29 ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00364,M00366 R01658,R02003,R02061 RC00279 ko00000,ko00001,ko00002,ko01000,ko01006 - - - polyprenyl_synt HSJS2_k127_2275610_8 861299.J421_3551 2.226e-18 95.0 COG0823@1|root,COG0823@2|Bacteria,1ZTBK@142182|Gemmatimonadetes 142182|Gemmatimonadetes U WD40-like Beta Propeller Repeat - - - ko:K03641 - - - - ko00000,ko02000 2.C.1.2 - - PD40 HSJS2_k127_2275610_6 861299.J421_3552 1.209e-20 100.0 COG0810@1|root,COG0810@2|Bacteria,1ZTWX@142182|Gemmatimonadetes 142182|Gemmatimonadetes M TonB C terminal - - - ko:K03832 - - - - ko00000,ko02000 2.C.1.1 - - TonB_2 HSJS2_k127_2275610_4 379066.GAU_1944 3.202e-29 131.0 COG0848@1|root,COG0848@2|Bacteria,1ZTRS@142182|Gemmatimonadetes 142182|Gemmatimonadetes U Biopolymer transport protein ExbD/TolR - - - ko:K03559,ko:K03560 - - - - ko00000,ko02000 1.A.30.2.1,1.A.30.2.2 - - ExbD HSJS2_k127_2275610_2 1379270.AUXF01000006_gene14 1.414e-45 186.0 COG0811@1|root,COG0811@2|Bacteria,1ZTBF@142182|Gemmatimonadetes 142182|Gemmatimonadetes U MotA/TolQ/ExbB proton channel family - - - ko:K03562 ko01120,map01120 - - - ko00000,ko02000 1.A.30.2.2 - - MotA_ExbB HSJS2_k127_2275610_0 1121468.AUBR01000031_gene1289 1.883e-99 335.0 COG1087@1|root,COG1087@2|Bacteria,1TQ7N@1239|Firmicutes,247M9@186801|Clostridia,42F1C@68295|Thermoanaerobacterales 186801|Clostridia M PFAM NAD-dependent epimerase dehydratase - - 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 - - - Epimerase,GDP_Man_Dehyd HSJS2_k127_2275610_10 1278073.MYSTI_03459 9.04e-16 89.0 COG1652@1|root,COG1652@2|Bacteria,1MUBV@1224|Proteobacteria,42QS9@68525|delta/epsilon subdivisions,2WN3H@28221|Deltaproteobacteria,2YVFR@29|Myxococcales 28221|Deltaproteobacteria S LysM domain - - - - - - - - - - - - LysM HSJS2_k127_2275610_3 1167006.UWK_02825 1.483e-39 153.0 COG0629@1|root,COG0629@2|Bacteria,1RCWT@1224|Proteobacteria,42TV9@68525|delta/epsilon subdivisions,2WNAN@28221|Deltaproteobacteria,2MKNW@213118|Desulfobacterales 28221|Deltaproteobacteria L Single-stranded DNA-binding protein ssb - - ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 - - - ko00000,ko00001,ko03029,ko03032,ko03400 - - - SSB HSJS2_k127_2275610_5 1123288.SOV_1c03420 2.524e-26 115.0 COG0454@1|root,COG0456@2|Bacteria,1V6KU@1239|Firmicutes,4H4WN@909932|Negativicutes 909932|Negativicutes K This enzyme acetylates the N-terminal alanine of ribosomal protein S18 rimI - 2.3.1.128 ko:K03789 - - - - ko00000,ko01000,ko03009 - - - Acetyltransf_1 HSJS2_k127_2275610_9 265072.Mfla_0412 9.705e-18 96.0 COG1214@1|root,COG1214@2|Bacteria,1MXPH@1224|Proteobacteria,2VQR7@28216|Betaproteobacteria,2KMK0@206350|Nitrosomonadales 206350|Nitrosomonadales O Glycoprotease family - - - ko:K14742 - - - - ko00000,ko03016 - - - Peptidase_M22 HSJS2_k127_2275610_7 1118059.CAHC01000001_gene685 1.471e-18 98.0 COG0802@1|root,COG0802@2|Bacteria,1V6CV@1239|Firmicutes,24MSS@186801|Clostridia,3WCKY@538999|Clostridiales incertae sedis 186801|Clostridia S Threonylcarbamoyl adenosine biosynthesis protein TsaE ydiB - - ko:K06925 - - - - ko00000,ko03016 - - - TsaE HSJS2_k127_2275610_1 861299.J421_3561 1.456e-93 313.0 COG0556@1|root,COG0556@2|Bacteria,1ZSQS@142182|Gemmatimonadetes 142182|Gemmatimonadetes L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage uvrB - - ko:K03702 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - Helicase_C,ResIII,UVR,UvrB HSJS2_k127_2289846_2 379066.GAU_1687 1.21e-62 225.0 COG1573@1|root,COG1573@2|Bacteria,1ZTG5@142182|Gemmatimonadetes 142182|Gemmatimonadetes L Uracil DNA glycosylase superfamily - - 3.2.2.27 ko:K21929 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - UDG HSJS2_k127_2289846_0 697281.Mahau_2620 8.987e-147 480.0 COG0305@1|root,COG0305@2|Bacteria,1TPCT@1239|Firmicutes,247W3@186801|Clostridia,42FJ3@68295|Thermoanaerobacterales 186801|Clostridia L Participates in initiation and elongation during chromosome replication dnaB - 3.6.4.12 ko:K02314 ko03030,ko04112,map03030,map04112 - - - ko00000,ko00001,ko01000,ko03032 - - - DnaB,DnaB_C HSJS2_k127_2289846_1 379066.GAU_1685 1.843e-112 374.0 COG1066@1|root,COG1066@2|Bacteria,1ZSYF@142182|Gemmatimonadetes 142182|Gemmatimonadetes O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function radA - - ko:K04485 - - - - ko00000,ko03400 - - - ATPase HSJS2_k127_2289846_4 1089548.KI783301_gene3320 1.32e-05 49.0 COG1066@1|root,COG1066@2|Bacteria,1TQ7Y@1239|Firmicutes,4H9YC@91061|Bacilli,3WEN9@539002|Bacillales incertae sedis 91061|Bacilli O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function radA - - ko:K04485 - - - - ko00000,ko03400 - - - AAA_25,ATPase,ChlI HSJS2_k127_2289846_3 861299.J421_3315 2.973e-40 165.0 COG1211@1|root,COG1211@2|Bacteria,1ZSTV@142182|Gemmatimonadetes 142182|Gemmatimonadetes I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) ispD - 2.7.7.60 ko:K00991 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05633 RC00002 ko00000,ko00001,ko00002,ko01000 - - - IspD HSJS2_k127_2289846_5 1429851.X548_16745 0.0004237 48.0 COG0009@1|root,COG0009@2|Bacteria,1MVPM@1224|Proteobacteria,1S610@1236|Gammaproteobacteria,1X6GG@135614|Xanthomonadales 135614|Xanthomonadales J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate tsaC GO:0000049,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 2.7.7.87 ko:K07566 - - R10463 RC00745 ko00000,ko01000,ko03009,ko03016 - - - Sua5_yciO_yrdC HSJS2_k127_2292999_1 518766.Rmar_1830 8.921e-66 233.0 COG0308@1|root,COG0308@2|Bacteria,4NFNJ@976|Bacteroidetes,1FK1K@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes E Peptidase family M1 domain - - - - - - - - - - - - Peptidase_M1 HSJS2_k127_2292999_0 1313301.AUGC01000005_gene302 1.407e-94 328.0 COG0334@1|root,COG0334@2|Bacteria,4NG6Y@976|Bacteroidetes 976|Bacteroidetes E Belongs to the Glu Leu Phe Val dehydrogenases family - - 1.4.1.3 ko:K00261 ko00220,ko00250,ko00471,ko00910,ko01100,ko01200,ko04217,ko04964,map00220,map00250,map00471,map00910,map01100,map01200,map04217,map04964 M00740 R00243,R00248 RC00006,RC02799 ko00000,ko00001,ko00002,ko01000,ko04147 - - - ELFV_dehydrog,ELFV_dehydrog_N HSJS2_k127_2292999_2 926560.KE387027_gene964 1.324e-38 150.0 COG5516@1|root,COG5516@2|Bacteria,1WMR5@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S Putative stress-induced transcription regulator - - - - - - - - - - - - ABATE,zf-CGNR HSJS2_k127_2306406_2 1379270.AUXF01000002_gene1118 6.178e-10 69.0 2CDZB@1|root,3340J@2|Bacteria,1ZU24@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_2306406_1 379066.GAU_1210 1.521e-88 310.0 COG4409@1|root,COG4409@2|Bacteria,1ZUBR@142182|Gemmatimonadetes 142182|Gemmatimonadetes G exo-alpha-(2->6)-sialidase activity - - - - - - - - - - - - - HSJS2_k127_2306406_0 525897.Dbac_0042 1.491e-111 381.0 COG0402@1|root,COG0402@2|Bacteria,1MVPA@1224|Proteobacteria,42NI6@68525|delta/epsilon subdivisions,2WKI1@28221|Deltaproteobacteria,2M87X@213115|Desulfovibrionales 28221|Deltaproteobacteria F Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine mtaD - 3.5.4.28,3.5.4.31 ko:K12960 ko00270,ko01100,map00270,map01100 - R09660 RC00477 ko00000,ko00001,ko01000 - - - Amidohydro_1 HSJS2_k127_2306406_3 479432.Sros_9027 4.927e-05 56.0 2CB4F@1|root,3412D@2|Bacteria,2IM63@201174|Actinobacteria,4EPXN@85012|Streptosporangiales 201174|Actinobacteria - - - - - - - - - - - - - - - HSJS2_k127_2306704_2 1200792.AKYF01000011_gene3595 2.534e-05 52.0 COG0697@1|root,COG0697@2|Bacteria,1TPUW@1239|Firmicutes,4HDIE@91061|Bacilli,26VH3@186822|Paenibacillaceae 91061|Bacilli EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - - - - - - - - - - EamA HSJS2_k127_2306704_1 861299.J421_2906 3.182e-26 122.0 COG1402@1|root,COG1402@2|Bacteria 2|Bacteria I creatininase - - 3.5.2.10 ko:K01470,ko:K22232 ko00330,ko00562,map00330,map00562 - R01884,R11771 RC00615 ko00000,ko00001,ko01000 - - - Creatininase HSJS2_k127_2306704_0 1379270.AUXF01000005_gene458 3.727e-76 265.0 COG0845@1|root,COG0845@2|Bacteria,1ZSX4@142182|Gemmatimonadetes 142182|Gemmatimonadetes M Biotin-lipoyl like - - - ko:K02005 - - - - ko00000 - - - HlyD_D23 HSJS2_k127_2316019_3 1242864.D187_000864 2.656e-08 59.0 COG0558@1|root,COG0558@2|Bacteria,1P9BV@1224|Proteobacteria,432CD@68525|delta/epsilon subdivisions,2WX7J@28221|Deltaproteobacteria 28221|Deltaproteobacteria I Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - 2.7.8.41,2.7.8.5 ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 - R01801,R02030 RC00002,RC00017,RC02795 ko00000,ko00001,ko01000 - - - CDP-OH_P_transf HSJS2_k127_2316019_1 1207063.P24_15816 2.813e-54 209.0 COG0845@1|root,COG0845@2|Bacteria,1MUFW@1224|Proteobacteria,2U2CU@28211|Alphaproteobacteria,2JQW0@204441|Rhodospirillales 204441|Rhodospirillales M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - HlyD_D23 HSJS2_k127_2316019_2 215803.DB30_3564 2.251e-43 181.0 COG1538@1|root,COG1538@2|Bacteria,1Q54P@1224|Proteobacteria,42NQV@68525|delta/epsilon subdivisions,2X5KQ@28221|Deltaproteobacteria,2YYUS@29|Myxococcales 28221|Deltaproteobacteria M Outer membrane efflux protein - - - ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 1.B.17,2.A.6.2 - - OEP HSJS2_k127_2316019_0 1379698.RBG1_1C00001G1725 7.084e-99 333.0 COG0841@1|root,COG0841@2|Bacteria,2NNUH@2323|unclassified Bacteria 2|Bacteria V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family acrD - - ko:K03296,ko:K18138,ko:K18307 ko01501,ko01503,ko02024,map01501,map01503,map02024 M00644,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000 2.A.6.2,2.A.6.2.20,2.A.6.2.32 - - ACR_tran HSJS2_k127_233324_2 518766.Rmar_1770 2.678e-66 248.0 COG1131@1|root,COG1131@2|Bacteria,4NEH0@976|Bacteroidetes,1FJR1@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes P ABC transporter gldA - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HSJS2_k127_233324_4 309801.trd_1536 1.605e-25 119.0 COG4447@1|root,COG4447@2|Bacteria,2G8DW@200795|Chloroflexi,27YX3@189775|Thermomicrobia 189775|Thermomicrobia S cellulose binding - - - - - - - - - - - - - HSJS2_k127_233324_0 1356852.N008_07470 1.932e-179 595.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NETS@976|Bacteroidetes,47KF8@768503|Cytophagia 976|Bacteroidetes EU Dipeptidyl peptidase IV (DPP IV) N-terminal region dpp - 3.4.14.5 ko:K01278 ko04974,map04974 - - - ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 - - - DPPIV_N,Peptidase_S9 HSJS2_k127_233324_1 1131269.AQVV01000013_gene1768 4.561e-71 250.0 COG0602@1|root,COG0602@2|Bacteria 2|Bacteria H queuosine metabolic process queE - 1.97.1.4,4.3.99.3 ko:K04068,ko:K10026 ko00790,ko01100,map00790,map01100 - R04710,R10002 RC02989 ko00000,ko00001,ko01000,ko03016 - - iAF987.Gmet_1658 Fer4_14,Radical_SAM HSJS2_k127_233324_3 1191523.MROS_2048 1.764e-26 125.0 COG0737@1|root,COG3303@1|root,COG0737@2|Bacteria,COG3303@2|Bacteria 2|Bacteria C Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - 1.7.2.2 ko:K03385 ko00910,ko01120,ko05132,map00910,map01120,map05132 M00530 R05712 RC00176 ko00000,ko00001,ko00002,ko01000 - - - 5_nucleotid_C,Cytochrom_C552,Cytochrome_C554,Paired_CXXCH_1,SBP_bac_8,SLH HSJS2_k127_2352038_0 518766.Rmar_1178 2.15e-182 588.0 COG3591@1|root,COG3591@2|Bacteria,4NEAK@976|Bacteroidetes,1FJT8@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes E Peptidase S46 dpp7 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009056,GO:0009279,GO:0009986,GO:0009987,GO:0016020,GO:0016049,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030154,GO:0030312,GO:0030313,GO:0031975,GO:0032502,GO:0033218,GO:0034641,GO:0040007,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044462,GO:0044464,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048869,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - - - - - - - - - - Peptidase_S46 HSJS2_k127_2356606_0 502025.Hoch_4261 4.272e-175 559.0 COG1288@1|root,COG1288@2|Bacteria,1MY1J@1224|Proteobacteria 1224|Proteobacteria S C4-dicarboxylate anaerobic - - - - - - - - - - - - DcuC HSJS2_k127_2359556_0 861299.J421_2622 5.007e-141 453.0 COG1158@1|root,COG1158@2|Bacteria,1ZSXH@142182|Gemmatimonadetes 142182|Gemmatimonadetes K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template - - - ko:K03628 ko03018,map03018 - - - ko00000,ko00001,ko03019,ko03021 - - - ATP-synt_ab,Rho_N,Rho_RNA_bind HSJS2_k127_2368095_0 1379270.AUXF01000001_gene2723 1.027e-275 869.0 COG1506@1|root,COG1506@2|Bacteria,1ZT9R@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Dipeptidyl peptidase IV (DPP IV) N-terminal region - - 3.4.14.5 ko:K01278 ko04974,map04974 - - - ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 - - - DPPIV_N,Peptidase_S9 HSJS2_k127_2368095_1 1279019.ARQK01000049_gene40 1.139e-41 159.0 COG3678@1|root,COG3678@2|Bacteria,1MZKK@1224|Proteobacteria 1224|Proteobacteria NPTU ATP-independent chaperone mediated protein folding - - - - - - - - - - - - LTXXQ,Metal_resist HSJS2_k127_2371190_0 1242864.D187_010288 2.037e-119 406.0 COG1090@1|root,COG4276@1|root,COG1090@2|Bacteria,COG4276@2|Bacteria,1MUB4@1224|Proteobacteria,42PQ2@68525|delta/epsilon subdivisions,2WK6V@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Domain of unknown function (DUF1731) - - - ko:K07071 - - - - ko00000 - - - DUF1731,Epimerase,Polyketide_cyc HSJS2_k127_2371190_1 1232410.KI421414_gene2820 5.184e-42 169.0 COG0420@1|root,COG0420@2|Bacteria,1MXMJ@1224|Proteobacteria,42Q5U@68525|delta/epsilon subdivisions,2WINF@28221|Deltaproteobacteria,43SKW@69541|Desulfuromonadales 28221|Deltaproteobacteria L Calcineurin-like phosphoesterase sbcD-1 - - ko:K03547 - - - - ko00000,ko03400 - - - Metallophos,Metallophos_2 HSJS2_k127_2376138_0 1449357.JQLK01000001_gene145 6.276e-105 374.0 COG2366@1|root,COG2366@2|Bacteria,1WJ3J@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S peptidase S45, penicillin amidase - - 3.5.1.11 ko:K01434 ko00311,ko01130,map00311,map01130 - R02170 RC00166,RC00328 ko00000,ko00001,ko01000,ko01002 - - - Penicil_amidase HSJS2_k127_2376138_1 1382359.JIAL01000001_gene2282 4.852e-90 319.0 COG0492@1|root,COG0492@2|Bacteria,3Y2NX@57723|Acidobacteria,2JI8S@204432|Acidobacteriia 204432|Acidobacteriia O L-lysine 6-monooxygenase (NADPH-requiring) - - 1.8.1.9 ko:K00384 ko00450,map00450 - R02016,R03596,R09372 RC00013,RC02518,RC02873 ko00000,ko00001,ko01000 - - - Pyr_redox_3 HSJS2_k127_2376138_2 1382304.JNIL01000001_gene3167 5.415e-18 87.0 COG0694@1|root,COG0694@2|Bacteria 2|Bacteria O iron-sulfur cluster assembly nifU - - ko:K07126,ko:K13819 - - - - ko00000 - - - Fer2_BFD,NifU,NifU_N HSJS2_k127_2376138_3 861299.J421_3915 5.575e-05 51.0 COG0489@1|root,COG0489@2|Bacteria,1ZSW7@142182|Gemmatimonadetes 142182|Gemmatimonadetes D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP - - - ko:K03593 - - - - ko00000,ko03029,ko03036 - - - FeS_assembly_P,ParA HSJS2_k127_2380805_2 1408473.JHXO01000004_gene220 1.238e-60 227.0 COG0729@1|root,COG1752@1|root,COG0729@2|Bacteria,COG1752@2|Bacteria,4NDXY@976|Bacteroidetes,2FNEV@200643|Bacteroidia 976|Bacteroidetes M Phospholipase, patatin family - - - ko:K07001 - - - - ko00000 - - - POTRA,Patatin HSJS2_k127_2380805_0 1163408.UU9_07526 1.184e-63 226.0 COG2110@1|root,COG2110@2|Bacteria,1RCWP@1224|Proteobacteria,1S3WJ@1236|Gammaproteobacteria,1X6PT@135614|Xanthomonadales 135614|Xanthomonadales S phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - - - - - - - - - - Macro HSJS2_k127_2380805_1 749927.AMED_2797 2.302e-61 216.0 COG3214@1|root,COG3214@2|Bacteria,2GK0T@201174|Actinobacteria,4DZPY@85010|Pseudonocardiales 201174|Actinobacteria S Winged helix DNA-binding domain - - - - - - - - - - - - HTH_42 HSJS2_k127_238573_0 1196029.ALIM01000018_gene4093 4.193e-19 99.0 COG0584@1|root,COG0584@2|Bacteria,1UGF1@1239|Firmicutes,4H9QE@91061|Bacilli,1ZPVG@1386|Bacillus 91061|Bacilli C Glycerophosphoryl diester phosphodiesterase family glpQ - 3.1.4.46 ko:K01126 ko00564,map00564 - R01030,R01470 RC00017,RC00425 ko00000,ko00001,ko01000 - - - DUF1080,GDPD HSJS2_k127_238573_1 1121920.AUAU01000002_gene2089 2.45e-17 85.0 COG0119@1|root,COG0119@2|Bacteria 2|Bacteria E Belongs to the alpha-IPM synthase homocitrate synthase family leuA3 - 2.3.3.13 ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 M00432 R01213 RC00004,RC00470,RC02754 br01601,ko00000,ko00001,ko00002,ko01000 - - - HMGL-like HSJS2_k127_2393297_4 1090318.ATTI01000001_gene1600 5.97e-20 93.0 COG0441@1|root,COG0441@2|Bacteria,1MUP2@1224|Proteobacteria,2TQWI@28211|Alphaproteobacteria,2K14B@204457|Sphingomonadales 204457|Sphingomonadales J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) thrS - 6.1.1.3 ko:K01868 ko00970,map00970 M00359,M00360 R03663 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - HGTP_anticodon,TGS,tRNA-synt_2b,tRNA_SAD HSJS2_k127_2393297_1 382464.ABSI01000011_gene2976 2.358e-36 152.0 COG1917@1|root,COG1917@2|Bacteria 2|Bacteria L Cupin 2, conserved barrel domain protein - - - - - - - - - - - - Cupin_2 HSJS2_k127_2393297_3 204669.Acid345_2164 1.534e-27 125.0 COG2318@1|root,COG2318@2|Bacteria,3Y501@57723|Acidobacteria,2JJGU@204432|Acidobacteriia 204432|Acidobacteriia S DinB superfamily - - - - - - - - - - - - DinB_2 HSJS2_k127_2393297_0 309807.SRU_0894 2.177e-85 296.0 COG1680@1|root,COG1680@2|Bacteria,4NEVS@976|Bacteroidetes 976|Bacteroidetes V COG1680 Beta-lactamase class C and other penicillin binding - - - - - - - - - - - - Beta-lactamase HSJS2_k127_2393297_2 1313172.YM304_28110 1.093e-33 137.0 COG1595@1|root,COG1595@2|Bacteria,2GP9D@201174|Actinobacteria,4CN9P@84992|Acidimicrobiia 84992|Acidimicrobiia K ECF sigma factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 HSJS2_k127_2402895_0 861299.J421_4161 1.052e-82 306.0 COG1747@1|root,COG1747@2|Bacteria,1ZT0K@142182|Gemmatimonadetes 142182|Gemmatimonadetes S RNA polymerase binding - - - - - - - - - - - - - HSJS2_k127_2415856_3 797209.ZOD2009_15936 6.156e-25 107.0 COG1012@1|root,arCOG01252@2157|Archaea,2XT1Y@28890|Euryarchaeota,23RYR@183963|Halobacteria 183963|Halobacteria C COG1012 NAD-dependent aldehyde dehydrogenases - - 1.2.1.16,1.2.1.20,1.2.1.79 ko:K00135 ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120 M00027 R00713,R00714,R02401 RC00080 ko00000,ko00001,ko00002,ko01000 - - - Aldedh HSJS2_k127_2415856_1 762376.AXYL_05966 4.688e-42 169.0 COG3264@1|root,COG3264@2|Bacteria,1MWSA@1224|Proteobacteria,2VJTH@28216|Betaproteobacteria,3T8VD@506|Alcaligenaceae 28216|Betaproteobacteria M Mechanosensitive ion channel - - - ko:K05802 - - - - ko00000,ko02000 1.A.23.1.1 - - MS_channel HSJS2_k127_2415856_0 1379270.AUXF01000001_gene2683 1.4e-237 753.0 COG0008@1|root,COG0008@2|Bacteria,1ZTAC@142182|Gemmatimonadetes 142182|Gemmatimonadetes J tRNA synthetases class I (E and Q), anti-codon binding domain glnS - 6.1.1.18 ko:K01886 ko00970,ko01100,map00970,map01100 M00359,M00360 R03652 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_1c,tRNA-synt_1c_C HSJS2_k127_2415856_2 1144275.COCOR_00285 5.55e-36 147.0 COG0412@1|root,COG0412@2|Bacteria,1MW7S@1224|Proteobacteria,42S9C@68525|delta/epsilon subdivisions,2WM4G@28221|Deltaproteobacteria,2YU8Y@29|Myxococcales 28221|Deltaproteobacteria Q Dienelactone hydrolase family dlhH2 - 3.1.1.45 ko:K01061 ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130 - R03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222 RC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686 ko00000,ko00001,ko01000 - - - DLH HSJS2_k127_2429679_0 1379270.AUXF01000004_gene2971 3.375e-71 246.0 COG1198@1|root,COG1198@2|Bacteria,1ZTE9@142182|Gemmatimonadetes 142182|Gemmatimonadetes L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA priA - - ko:K04066 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C HSJS2_k127_2429679_1 861299.J421_1752 1.62e-43 177.0 2DWGD@1|root,3407S@2|Bacteria,1ZV24@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg HSJS2_k127_2429679_2 861299.J421_2819 3.014e-35 139.0 COG0123@1|root,COG0123@2|Bacteria,1ZSKN@142182|Gemmatimonadetes 142182|Gemmatimonadetes BQ Histone deacetylase domain - - - - - - - - - - - - Hist_deacetyl HSJS2_k127_2435508_1 379066.GAU_2175 2.606e-238 753.0 COG0178@1|root,COG0178@2|Bacteria,1ZT1W@142182|Gemmatimonadetes 142182|Gemmatimonadetes L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate - - - ko:K03701 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - ABC_tran HSJS2_k127_2435508_3 1396141.BATP01000003_gene5098 2.631e-70 254.0 COG1215@1|root,COG1215@2|Bacteria 2|Bacteria M transferase activity, transferring glycosyl groups exoO GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - ko:K16555,ko:K16564 - - - - ko00000,ko01000,ko01003 - GT2 - Glycos_transf_2 HSJS2_k127_2435508_0 945713.IALB_0006 2.7e-318 995.0 COG0188@1|root,COG0188@2|Bacteria 2|Bacteria L DNA topoisomerase II activity gyrA - 5.99.1.3 ko:K02469 - - - - ko00000,ko01000,ko03032,ko03400 - - - DNA_gyraseA_C,DNA_topoisoIV HSJS2_k127_2435508_2 861299.J421_2397 2.345e-88 304.0 COG1171@1|root,COG1171@2|Bacteria,1ZTBP@142182|Gemmatimonadetes 2|Bacteria E Pyridoxal-phosphate dependent enzyme - - 4.3.1.19 ko:K01754 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230 M00570 R00220,R00996 RC00418,RC02600 ko00000,ko00001,ko00002,ko01000 - - - PALP HSJS2_k127_2435508_5 861299.J421_0993 1.229e-44 171.0 COG2071@1|root,COG2071@2|Bacteria,1ZSXR@142182|Gemmatimonadetes 2|Bacteria S Peptidase C26 - - - ko:K07010 - - - - ko00000,ko01002 - - - Peptidase_C26 HSJS2_k127_2435508_4 1173028.ANKO01000116_gene5724 8.765e-50 192.0 COG0546@1|root,COG0546@2|Bacteria,1G6AW@1117|Cyanobacteria,1HCZI@1150|Oscillatoriales 1117|Cyanobacteria S haloacid dehalogenase-like hydrolase - - - - - - - - - - - - HAD_2 HSJS2_k127_2443699_2 518766.Rmar_2201 3.587e-27 115.0 COG1629@1|root,COG4771@2|Bacteria,4NDX3@976|Bacteroidetes,1FISC@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes P TonB dependent receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - CarbopepD_reg_2,CarboxypepD_reg,Plug,TonB_dep_Rec HSJS2_k127_2443699_4 880073.Calab_0143 3.77e-10 73.0 COG4219@1|root,COG4219@2|Bacteria,2NS3V@2323|unclassified Bacteria 2|Bacteria KT Peptidase M56 - - - - - - - - - - - - Amidase_6,DUF4309,DUF5301 HSJS2_k127_2443699_1 404589.Anae109_0486 4.351e-34 152.0 COG0457@1|root,COG0741@1|root,COG0457@2|Bacteria,COG0741@2|Bacteria,1MV3F@1224|Proteobacteria,42N7A@68525|delta/epsilon subdivisions,2WPM9@28221|Deltaproteobacteria 28221|Deltaproteobacteria M transglycosylase - - - ko:K08309 - - - - ko00000,ko01000,ko01011 - GH23 - SLT,TPR_16,TPR_6,TPR_8 HSJS2_k127_2443699_3 1499685.CCFJ01000047_gene3672 1.747e-23 102.0 COG1278@1|root,COG1278@2|Bacteria,1VEE0@1239|Firmicutes,4HNJC@91061|Bacilli,1ZHTU@1386|Bacillus 91061|Bacilli K Cold-shock protein cspD - - ko:K03704 - - - - ko00000,ko03000 - - - CSD HSJS2_k127_2443699_0 861299.J421_1151 7.499e-86 295.0 COG0258@1|root,COG0749@1|root,COG0258@2|Bacteria,COG0749@2|Bacteria,1ZTCF@142182|Gemmatimonadetes 142182|Gemmatimonadetes L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity polA - 2.7.7.7 ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 - R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko01000,ko03032,ko03400 - - - 5_3_exonuc,5_3_exonuc_N,DNA_pol_A,DNA_pol_A_exo1 HSJS2_k127_2462251_4 411467.BACCAP_01140 8.596e-06 49.0 COG1387@1|root,COG1387@2|Bacteria,1TRKS@1239|Firmicutes,249TM@186801|Clostridia,2699Q@186813|unclassified Clostridiales 186801|Clostridia E PHP domain - - 3.1.3.15 ko:K04486 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R03013 RC00017 ko00000,ko00001,ko00002,ko01000 - - - PHP HSJS2_k127_2462251_1 1121930.AQXG01000017_gene3140 1.519e-65 232.0 COG0131@1|root,COG0131@2|Bacteria,4NENP@976|Bacteroidetes,1IP4B@117747|Sphingobacteriia 976|Bacteroidetes E belongs to the imidazoleglycerol-phosphate dehydratase family hisB GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 ko:K01089,ko:K01693 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R03013,R03457 RC00017,RC00932 ko00000,ko00001,ko00002,ko01000 - - - Hydrolase_like,IGPD,PNK3P HSJS2_k127_2462251_3 935863.AWZR01000003_gene2601 2.615e-44 178.0 COG0118@1|root,COG0118@2|Bacteria,1MU4X@1224|Proteobacteria,1RRP3@1236|Gammaproteobacteria,1X5IB@135614|Xanthomonadales 135614|Xanthomonadales E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR hisH - - ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04558 RC00010,RC01190,RC01943 ko00000,ko00001,ko00002,ko01000 - - - GATase HSJS2_k127_2462251_2 357808.RoseRS_3192 7.749e-54 204.0 COG0106@1|root,COG0106@2|Bacteria,2G6EC@200795|Chloroflexi,376JE@32061|Chloroflexia 32061|Chloroflexia E TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase hisA GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 ko:K01814 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04640 RC00945 ko00000,ko00001,ko00002,ko01000 - - - His_biosynth HSJS2_k127_2462251_0 926560.KE387023_gene3360 3.61e-78 276.0 COG0107@1|root,COG0107@2|Bacteria,1WJ30@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit hisF GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - ko:K02500 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04558 RC00010,RC01190,RC01943 ko00000,ko00001,ko00002,ko01000 - - - His_biosynth HSJS2_k127_2471898_0 1382304.JNIL01000001_gene693 1.12e-65 233.0 COG0564@1|root,COG0564@2|Bacteria,1TPCM@1239|Firmicutes,4HBG2@91061|Bacilli,2782F@186823|Alicyclobacillaceae 91061|Bacilli J Responsible for synthesis of pseudouridine from uracil rluD GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 ko:K06180 - - - - ko00000,ko01000,ko03009 - - - PseudoU_synth_2,S4 HSJS2_k127_2471898_1 379066.GAU_1417 3.77e-19 102.0 2DUTE@1|root,33S5W@2|Bacteria,1ZSMI@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_2471898_2 56107.Cylst_0055 5.234e-10 73.0 COG0457@1|root,COG0457@2|Bacteria,1G4J0@1117|Cyanobacteria,1HJ4A@1161|Nostocales 1117|Cyanobacteria O Tetratricopeptide repeat - - - - - - - - - - - - FGE-sulfatase,TPR_1,TPR_11,TPR_16,TPR_2,TPR_8 HSJS2_k127_2481155_6 861299.J421_5987 8.494e-89 305.0 COG1793@1|root,COG3285@1|root,COG1793@2|Bacteria,COG3285@2|Bacteria 2|Bacteria L DNA ligase (ATP) activity - - 6.5.1.1 ko:K01971 ko03450,map03450 - R00381 RC00005 ko00000,ko00001,ko01000,ko03400 - - - DNA_ligase_A_C,DNA_ligase_A_M,LigD_N HSJS2_k127_2481155_7 861299.J421_5988 3.063e-80 284.0 COG1273@1|root,COG1273@2|Bacteria 2|Bacteria M With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD ku - - ko:K10979 ko03450,map03450 - - - ko00000,ko00001,ko03400 - - - Ku HSJS2_k127_2481155_10 1123073.KB899242_gene948 1.903e-39 157.0 COG0457@1|root,COG0789@1|root,COG0457@2|Bacteria,COG0789@2|Bacteria,1NP3J@1224|Proteobacteria 1224|Proteobacteria K TPR repeat - - - - - - - - - - - - MerR_1,TPR_11,TPR_16,TPR_2,TPR_6,TPR_7,TPR_8 HSJS2_k127_2481155_1 251221.35211765 2.74e-149 503.0 COG0577@1|root,COG0577@2|Bacteria 2|Bacteria V efflux transmembrane transporter activity - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD HSJS2_k127_2481155_3 518766.Rmar_1990 5.407e-125 410.0 COG4257@1|root,COG4257@2|Bacteria 2|Bacteria V antibiotic catabolic process - - - ko:K18235 - - - - ko00000,ko01000,ko01504 - - - DUF5011 HSJS2_k127_2481155_12 1131269.AQVV01000040_gene1643 1.996e-25 111.0 COG0254@1|root,COG0254@2|Bacteria 2|Bacteria J rRNA binding rpmE GO:0008150,GO:0040007 - ko:K02909 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L31 HSJS2_k127_2481155_2 861299.J421_2936 1.248e-125 412.0 COG0216@1|root,COG0216@2|Bacteria,1ZSNT@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA prfA - - ko:K02835 - - - - ko00000,ko03012 - - - PCRF,RF-1 HSJS2_k127_2481155_9 1192034.CAP_8861 1.224e-44 175.0 COG2890@1|root,COG2890@2|Bacteria,1MXCQ@1224|Proteobacteria,42PKA@68525|delta/epsilon subdivisions,2WNH0@28221|Deltaproteobacteria,2YVC9@29|Myxococcales 28221|Deltaproteobacteria J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif prmC GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 ko:K02493 - - R10806 RC00003,RC03279 ko00000,ko01000,ko03012 - - - MTS,Methyltransf_31 HSJS2_k127_2481155_13 379066.GAU_1186 1.334e-17 87.0 COG3679@1|root,COG3679@2|Bacteria,1ZTRW@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Control of competence regulator ComK, YlbF/YmcA - - - - - - - - - - - - Com_YlbF HSJS2_k127_2481155_11 266117.Rxyl_2978 5.606e-34 143.0 COG0558@1|root,COG0558@2|Bacteria,2GYKW@201174|Actinobacteria,4CQHA@84995|Rubrobacteria 84995|Rubrobacteria I CDP-alcohol phosphatidyltransferase - - 2.7.8.5 ko:K00995 ko00564,ko01100,map00564,map01100 - R01801 RC00002,RC00017,RC02795 ko00000,ko00001,ko01000 - - - CDP-OH_P_transf HSJS2_k127_2481155_0 1121272.KB903250_gene2734 1.952e-209 658.0 COG1260@1|root,COG1260@2|Bacteria,2GJVN@201174|Actinobacteria 201174|Actinobacteria I Myo-inositol-1-phosphate synthase - - 5.5.1.4 ko:K01858 ko00521,ko00562,ko01100,ko01130,map00521,map00562,map01100,map01130 - R07324 RC01804 ko00000,ko00001,ko01000 - - - Inos-1-P_synth,NAD_binding_5 HSJS2_k127_2481155_8 1288484.APCS01000079_gene2106 6.018e-46 182.0 COG0125@1|root,COG0125@2|Bacteria,1WK3U@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis tmk GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 ko:K00943 ko00240,ko01100,map00240,map01100 M00053 R02094,R02098 RC00002 ko00000,ko00001,ko00002,ko01000 - - - Thymidylate_kin HSJS2_k127_2481155_4 861299.J421_2940 1.511e-91 321.0 COG0793@1|root,COG0793@2|Bacteria,1ZSUF@142182|Gemmatimonadetes 142182|Gemmatimonadetes M tail specific protease - - 3.4.21.102 ko:K03797 - - - - ko00000,ko01000,ko01002 - - - PDZ,Peptidase_S41 HSJS2_k127_2481155_5 861299.J421_0464 3.201e-89 320.0 COG0793@1|root,COG0793@2|Bacteria,1ZT92@142182|Gemmatimonadetes 142182|Gemmatimonadetes M tail specific protease - - 3.4.21.102 ko:K03797 - - - - ko00000,ko01000,ko01002 - - - PDZ_2,Peptidase_S41 HSJS2_k127_2491715_0 861299.J421_2748 0.0 1267.0 COG0178@1|root,COG0178@2|Bacteria,1ZTDJ@142182|Gemmatimonadetes 142182|Gemmatimonadetes L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate uvrA - - ko:K03701 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - ABC_tran HSJS2_k127_2491715_5 1379270.AUXF01000004_gene3062 1.628e-28 118.0 2E9HN@1|root,333QR@2|Bacteria,1ZTU1@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_2491715_2 1379270.AUXF01000004_gene3061 1.516e-66 237.0 COG1842@1|root,COG1842@2|Bacteria,1ZT82@142182|Gemmatimonadetes 142182|Gemmatimonadetes KT PspA/IM30 family - - - ko:K03969 - - - - ko00000 - - - PspA_IM30 HSJS2_k127_2491715_3 506534.Rhein_3210 1.024e-55 211.0 COG0483@1|root,COG0483@2|Bacteria,1MUQT@1224|Proteobacteria,1RNME@1236|Gammaproteobacteria,1WWE2@135613|Chromatiales 135613|Chromatiales G Inositol monophosphatase - - 3.1.3.25 ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 M00131 R01185,R01186,R01187 RC00078 ko00000,ko00001,ko00002,ko01000 - - - Inositol_P HSJS2_k127_2491715_1 861299.J421_2799 1.286e-119 392.0 COG0180@1|root,COG0180@2|Bacteria,1ZT3P@142182|Gemmatimonadetes 142182|Gemmatimonadetes J tRNA synthetases class I (W and Y) trpS - 6.1.1.2 ko:K01867 ko00970,map00970 M00359,M00360 R03664 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_1b HSJS2_k127_2491715_4 379066.GAU_0902 4.167e-29 126.0 COG0111@1|root,COG0111@2|Bacteria,1ZUG6@142182|Gemmatimonadetes 142182|Gemmatimonadetes EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - - - - - - - - - - 2-Hacid_dh_C HSJS2_k127_2491846_0 861299.J421_4428 1.651e-145 477.0 COG0761@1|root,COG0761@2|Bacteria,1ZTGU@142182|Gemmatimonadetes 142182|Gemmatimonadetes C LytB protein - - 1.17.7.4 ko:K03527 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05884,R08210 RC01137,RC01487 ko00000,ko00001,ko00002,ko01000 - - - LYTB HSJS2_k127_2499794_4 518766.Rmar_1007 2.303e-40 161.0 COG0589@1|root,COG0589@2|Bacteria,4NFZ5@976|Bacteroidetes,1FJR9@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes T Belongs to the universal stress protein A family - - - - - - - - - - - - Usp HSJS2_k127_2499794_8 335543.Sfum_0737 1.143e-23 105.0 COG0589@1|root,COG0589@2|Bacteria,1NDJW@1224|Proteobacteria,430KQ@68525|delta/epsilon subdivisions,2WVKY@28221|Deltaproteobacteria,2MRZ2@213462|Syntrophobacterales 28221|Deltaproteobacteria T Universal stress protein family - - - - - - - - - - - - Usp HSJS2_k127_2499794_2 187272.Mlg_2778 3.18e-51 210.0 COG0235@1|root,COG0235@2|Bacteria,1MW7B@1224|Proteobacteria,1RPIK@1236|Gammaproteobacteria 1236|Gammaproteobacteria G Catalyzes the cleavage of L-fuculose 1-phosphate to glycerone phosphate and L-lactaldehyde fucA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006004,GO:0008150,GO:0008152,GO:0008270,GO:0008738,GO:0009056,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0019317,GO:0019318,GO:0019320,GO:0019321,GO:0019323,GO:0019566,GO:0019568,GO:0019571,GO:0042354,GO:0042355,GO:0043167,GO:0043169,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046372,GO:0046872,GO:0046914,GO:0071704,GO:1901575 4.1.1.104,4.1.2.17 ko:K01628,ko:K22130 ko00051,ko01120,map00051,map01120 - R02262 RC00603,RC00604 ko00000,ko00001,ko01000 - - - Aldolase_II HSJS2_k127_2499794_0 1101190.ARWB01000001_gene3636 1.333e-121 400.0 COG0182@1|root,COG0182@2|Bacteria,1MUPM@1224|Proteobacteria,2TSPP@28211|Alphaproteobacteria,36XSQ@31993|Methylocystaceae 28211|Alphaproteobacteria J Initiation factor 2 subunit family mtnA - 5.3.1.23 ko:K08963 ko00270,ko01100,map00270,map01100 M00034 R04420 RC01151 ko00000,ko00001,ko00002,ko01000 - - - IF-2B HSJS2_k127_2499794_6 1449065.JMLL01000010_gene1165 2.671e-34 142.0 COG0346@1|root,COG0346@2|Bacteria,1RIN8@1224|Proteobacteria,2U9WM@28211|Alphaproteobacteria,43K76@69277|Phyllobacteriaceae 28211|Alphaproteobacteria E bleomycin resistance protein - - - - - - - - - - - - Glyoxalase HSJS2_k127_2499794_1 1121861.KB899917_gene3595 5.956e-70 241.0 COG0225@1|root,COG0225@2|Bacteria,1MVUS@1224|Proteobacteria,2TSAM@28211|Alphaproteobacteria,2JQN7@204441|Rhodospirillales 204441|Rhodospirillales O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine msrA - 1.8.4.11 ko:K07304 - - - - ko00000,ko01000 - - - PMSR HSJS2_k127_2499794_7 378806.STAUR_5565 6.967e-25 117.0 COG0613@1|root,COG0613@2|Bacteria 2|Bacteria Q PHP domain protein - - - - - - - - - - - - DUF3604 HSJS2_k127_2499794_5 1500890.JQNL01000001_gene124 3.944e-36 158.0 COG1670@1|root,COG1670@2|Bacteria,1N36Q@1224|Proteobacteria,1S9V1@1236|Gammaproteobacteria,1X6ZV@135614|Xanthomonadales 135614|Xanthomonadales J Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_3 HSJS2_k127_2499794_3 248742.XP_005650249.1 1.473e-46 174.0 COG0436@1|root,KOG0257@2759|Eukaryota 2759|Eukaryota E transferase activity, transferring nitrogenous groups - - - - - - - - - - - - Aminotran_1_2 HSJS2_k127_2499999_3 58123.JOFJ01000017_gene4197 5.615e-16 80.0 COG3844@1|root,COG3844@2|Bacteria,2GMJQ@201174|Actinobacteria,4EH57@85012|Streptosporangiales 201174|Actinobacteria E Aminotransferase class-V kynU - 3.7.1.3 ko:K01556 ko00380,ko01100,map00380,map01100 M00038 R00987,R02668,R03936 RC00284,RC00415 ko00000,ko00001,ko00002,ko01000 - - - Aminotran_5 HSJS2_k127_2499999_1 1003200.AXXA_18361 1.033e-56 209.0 COG1878@1|root,COG1878@2|Bacteria,1P8U5@1224|Proteobacteria,2VHG4@28216|Betaproteobacteria,3T3Q7@506|Alcaligenaceae 28216|Betaproteobacteria F Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation kynB GO:0003674,GO:0003824,GO:0004061,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043167,GO:0043169,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 ko:K07130 ko00380,ko00630,ko01100,map00380,map00630,map01100 M00038 R00988,R01959,R04911 RC00263,RC00323 ko00000,ko00001,ko00002,ko01000 - - - Cyclase HSJS2_k127_2499999_0 326427.Cagg_2469 9.24e-163 529.0 COG0493@1|root,COG0493@2|Bacteria,2G6SR@200795|Chloroflexi,374Z6@32061|Chloroflexia 32061|Chloroflexia C PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - 1.18.1.2,1.19.1.1 ko:K00528 - - R10159 - ko00000,ko01000 - - - Pyr_redox_2 HSJS2_k127_2499999_2 861299.J421_2830 2.777e-17 96.0 COG1629@1|root,COG4771@2|Bacteria,1ZU8C@142182|Gemmatimonadetes 142182|Gemmatimonadetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - Plug HSJS2_k127_250151_1 861299.J421_3942 2.401e-100 337.0 COG1208@1|root,COG1208@2|Bacteria,1ZSYR@142182|Gemmatimonadetes 142182|Gemmatimonadetes JM Nucleotidyl transferase - - 2.7.7.24 ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 M00793 R02328 RC00002 ko00000,ko00001,ko00002,ko01000 - - - NTP_transferase HSJS2_k127_250151_0 1192034.CAP_5366 4.266e-126 415.0 COG0119@1|root,COG0119@2|Bacteria,1MUNQ@1224|Proteobacteria,42MSP@68525|delta/epsilon subdivisions,2WIUZ@28221|Deltaproteobacteria,2YTZB@29|Myxococcales 28221|Deltaproteobacteria E synthase homocitrate synthase family - - 2.3.3.13 ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 M00432 R01213 RC00004,RC00470,RC02754 br01601,ko00000,ko00001,ko00002,ko01000 - - - HMGL-like HSJS2_k127_2517085_4 91464.S7335_527 1.378e-32 143.0 COG2203@1|root,COG2905@1|root,COG5002@1|root,COG2203@2|Bacteria,COG2905@2|Bacteria,COG5002@2|Bacteria,1FZYQ@1117|Cyanobacteria,1H2J6@1129|Synechococcus 1117|Cyanobacteria T T COG0642 Signal transduction histidine kinase - - - - - - - - - - - - CBS,GAF,HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_8,PAS_9,Response_reg HSJS2_k127_2517085_2 1282876.BAOK01000001_gene1241 1.215e-73 259.0 COG0530@1|root,COG0530@2|Bacteria,1MU3R@1224|Proteobacteria,2TST5@28211|Alphaproteobacteria,4BRH5@82117|unclassified Alphaproteobacteria 28211|Alphaproteobacteria P Sodium/calcium exchanger protein - - - ko:K07301 - - - - ko00000,ko02000 2.A.19.5 - - Na_Ca_ex HSJS2_k127_2517085_5 518766.Rmar_2133 6.774e-13 73.0 COG1629@1|root,COG4771@2|Bacteria,4NFKZ@976|Bacteroidetes,1FIJR@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes P TonB dependent receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - CarbopepD_reg_2,Plug,TonB_dep_Rec HSJS2_k127_2517085_1 1122604.JONR01000033_gene31 1.256e-112 372.0 COG2326@1|root,COG2326@2|Bacteria,1MVE2@1224|Proteobacteria,1RM9U@1236|Gammaproteobacteria,1X42V@135614|Xanthomonadales 135614|Xanthomonadales H polyphosphate kinase - - - - - - - - - - - - PPK2 HSJS2_k127_2517085_3 290317.Cpha266_2735 1.837e-34 142.0 COG0705@1|root,COG0705@2|Bacteria,1FDF1@1090|Chlorobi 1090|Chlorobi S PFAM Rhomboid family protein - - - - - - - - - - - - Rhomboid HSJS2_k127_2517085_0 1379270.AUXF01000002_gene1557 1.004e-139 464.0 COG2091@1|root,COG2091@2|Bacteria,1ZUQA@142182|Gemmatimonadetes 142182|Gemmatimonadetes H lysine biosynthetic process via aminoadipic acid - - - - - - - - - - - - - HSJS2_k127_2518158_2 861299.J421_3760 2.176e-58 213.0 COG2177@1|root,COG2177@2|Bacteria,1ZTDR@142182|Gemmatimonadetes 142182|Gemmatimonadetes D Part of the ABC transporter FtsEX involved in - - - ko:K09811 ko02010,map02010 M00256 - - ko00000,ko00001,ko00002,ko02000,ko03036 3.A.1.140 - - - HSJS2_k127_2518158_0 379066.GAU_2160 2.445e-70 250.0 COG2884@1|root,COG2884@2|Bacteria,1ZTHQ@142182|Gemmatimonadetes 142182|Gemmatimonadetes D ABC transporter - - - ko:K09812 ko02010,map02010 M00256 - - ko00000,ko00001,ko00002,ko02000,ko03036 3.A.1.140 - - ABC_tran HSJS2_k127_2518158_1 861299.J421_3744 2.769e-70 252.0 COG1995@1|root,COG1995@2|Bacteria,1ZT2S@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Pyridoxal phosphate biosynthetic protein PdxA - - 1.1.1.262 ko:K00097 ko00750,ko01100,map00750,map01100 M00124 R05681,R05837,R07406 RC00089,RC00675,RC01475 ko00000,ko00001,ko00002,ko01000 - - - PdxA HSJS2_k127_2533606_3 1492922.GY26_10070 3.945e-21 99.0 COG0823@1|root,COG0823@2|Bacteria,1MV09@1224|Proteobacteria,1RMCY@1236|Gammaproteobacteria,1J4F8@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria U Involved in the TonB-independent uptake of proteins tolB GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019904,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701 - ko:K03641 - - - - ko00000,ko02000 2.C.1.2 - - PD40,TolB_N HSJS2_k127_2533606_1 368407.Memar_0167 5.928e-54 208.0 COG0053@1|root,arCOG01474@2157|Archaea,2XU96@28890|Euryarchaeota,2N9HJ@224756|Methanomicrobia 224756|Methanomicrobia P Dimerisation domain of Zinc Transporter - - - - - - - - - - - - Cation_efflux,ZT_dimer HSJS2_k127_2533606_0 292459.STH881 1.245e-302 939.0 COG0365@1|root,COG0365@2|Bacteria,1TQTI@1239|Firmicutes 1239|Firmicutes I Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA acsA - 6.2.1.1 ko:K01895 ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200 M00357 R00235,R00236,R00316,R00926,R01354 RC00004,RC00012,RC00043,RC00070,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000,ko01004 - - - ACAS_N,AMP-binding,AMP-binding_C HSJS2_k127_2533606_2 290512.Paes_0269 3.155e-48 185.0 COG0744@1|root,COG0744@2|Bacteria,1FDQX@1090|Chlorobi 1090|Chlorobi M Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors mtgA - 2.4.1.129 ko:K03814 ko00550,map00550 - - - ko00000,ko00001,ko01000,ko01003,ko01011 - GT51 - Transgly HSJS2_k127_254299_4 861299.J421_3070 1.913e-69 250.0 COG0768@1|root,COG0768@2|Bacteria,1ZSYD@142182|Gemmatimonadetes 142182|Gemmatimonadetes M Penicillin binding protein transpeptidase domain - - 3.4.16.4 ko:K03587 ko00550,ko01501,map00550,map01501 - - - ko00000,ko00001,ko01000,ko01011,ko03036 - - - PBP_dimer,Transpeptidase HSJS2_k127_254299_0 861299.J421_3071 3.33e-123 422.0 COG0769@1|root,COG0769@2|Bacteria,1ZSS3@142182|Gemmatimonadetes 142182|Gemmatimonadetes M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan murE - 6.3.2.13 ko:K01928 ko00300,ko00550,map00300,map00550 - R02788 RC00064,RC00090 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M HSJS2_k127_254299_5 861299.J421_3072 1.746e-67 255.0 COG0770@1|root,COG0770@2|Bacteria,1ZT1U@142182|Gemmatimonadetes 142182|Gemmatimonadetes M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein murF - 6.3.2.10 ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 - R04573,R04617 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M HSJS2_k127_254299_1 379066.GAU_1425 1.75e-110 374.0 COG0472@1|root,COG0472@2|Bacteria,1ZT4Y@142182|Gemmatimonadetes 142182|Gemmatimonadetes M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan mraY - 2.7.8.13 ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 - R05629,R05630 RC00002,RC02753 ko00000,ko00001,ko01000,ko01011 9.B.146 - - Glycos_transf_4 HSJS2_k127_254299_2 861299.J421_3074 6.37e-87 312.0 COG0771@1|root,COG0771@2|Bacteria,1ZT38@142182|Gemmatimonadetes 142182|Gemmatimonadetes D Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) murD - 6.3.2.9 ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 - R02783 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase_C,Mur_ligase_M HSJS2_k127_254299_3 1379270.AUXF01000005_gene689 1.59e-73 276.0 COG0772@1|root,COG0772@2|Bacteria,1ZSXI@142182|Gemmatimonadetes 142182|Gemmatimonadetes D Cell cycle protein - - - ko:K03588 ko04112,map04112 - - - ko00000,ko00001,ko02000,ko03036 2.A.103.1 - - FTSW_RODA_SPOVE HSJS2_k127_254299_6 861299.J421_3076 5.114e-48 179.0 COG0707@1|root,COG0707@2|Bacteria,1ZSW5@142182|Gemmatimonadetes 142182|Gemmatimonadetes M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) murG - 2.4.1.227 ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 - R05032,R05662 RC00005,RC00049 ko00000,ko00001,ko01000,ko01011 - GT28 - Glyco_tran_28_C,Glyco_transf_28 HSJS2_k127_2549212_7 945713.IALB_1358 2.036e-21 100.0 COG0811@1|root,COG0811@2|Bacteria 2|Bacteria U bacteriocin transport exbB - - ko:K03561 - - - - ko00000,ko02000 1.A.30.2.1 - - MotA_ExbB HSJS2_k127_2549212_5 1125863.JAFN01000001_gene592 1.387e-80 289.0 COG4608@1|root,COG4608@2|Bacteria,1NU4K@1224|Proteobacteria,42TDH@68525|delta/epsilon subdivisions,2WIQT@28221|Deltaproteobacteria 28221|Deltaproteobacteria P Belongs to the ABC transporter superfamily - - - ko:K02032 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - ABC_tran,oligo_HPY HSJS2_k127_2549212_0 644966.Tmar_0290 3.373e-105 363.0 COG0444@1|root,COG0444@2|Bacteria,1TP6E@1239|Firmicutes,247NN@186801|Clostridia,3WCCK@538999|Clostridiales incertae sedis 186801|Clostridia P Belongs to the ABC transporter superfamily oppD - - ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00439 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 - - ABC_tran,oligo_HPY HSJS2_k127_2549212_2 443143.GM18_2521 2.051e-88 300.0 COG1173@1|root,COG1173@2|Bacteria,1MU26@1224|Proteobacteria,42MFP@68525|delta/epsilon subdivisions,2WJ47@28221|Deltaproteobacteria 28221|Deltaproteobacteria P PFAM binding-protein-dependent transport systems inner membrane component - - - ko:K02034 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - BPD_transp_1,OppC_N HSJS2_k127_2549212_1 517417.Cpar_0557 5.568e-91 309.0 COG0601@1|root,COG0601@2|Bacteria,1FDDB@1090|Chlorobi 1090|Chlorobi P PFAM binding-protein-dependent transport systems inner membrane component - - - ko:K02033 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - BPD_transp_1 HSJS2_k127_2549212_4 1125863.JAFN01000001_gene586 5.882e-81 291.0 COG0747@1|root,COG0747@2|Bacteria,1MUZH@1224|Proteobacteria,42MFK@68525|delta/epsilon subdivisions,2WKBU@28221|Deltaproteobacteria 28221|Deltaproteobacteria E extracellular solute-binding protein, family 5 - - - ko:K02035,ko:K13893 ko02010,ko02024,map02010,map02024 M00239,M00349 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.21,3.A.1.5.24 - - SBP_bac_5 HSJS2_k127_2549212_3 338963.Pcar_1870 1.417e-86 306.0 COG0747@1|root,COG0747@2|Bacteria,1MUZH@1224|Proteobacteria,42MFK@68525|delta/epsilon subdivisions,2WKBU@28221|Deltaproteobacteria,43S4Y@69541|Desulfuromonadales 28221|Deltaproteobacteria E Bacterial extracellular solute-binding proteins, family 5 Middle - - - ko:K02035,ko:K13893 ko02010,ko02024,map02010,map02024 M00239,M00349 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.21,3.A.1.5.24 - - SBP_bac_5 HSJS2_k127_2549212_6 861299.J421_2684 3.698e-54 200.0 COG0095@1|root,COG0095@2|Bacteria,1ZTY2@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Biotin/lipoate A/B protein ligase family - - 6.3.1.20 ko:K03800 ko00785,ko01100,map00785,map01100 - R07770,R07771,R11143 RC00043,RC00070,RC00090,RC00992,RC02896 ko00000,ko00001,ko01000 - - - BPL_LplA_LipB HSJS2_k127_2549212_8 130081.XP_005703185.1 9.704e-07 61.0 COG4188@1|root,KOG3847@2759|Eukaryota 2759|Eukaryota B 1-alkyl-2-acetylglycerophosphocholine esterase activity PLA2G7 GO:0002009,GO:0002682,GO:0002684,GO:0002685,GO:0002687,GO:0002688,GO:0002690,GO:0003674,GO:0003824,GO:0003847,GO:0004620,GO:0004623,GO:0005488,GO:0005543,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006979,GO:0007275,GO:0007596,GO:0007599,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009395,GO:0009611,GO:0009653,GO:0009790,GO:0009888,GO:0009987,GO:0010941,GO:0012505,GO:0016020,GO:0016042,GO:0016043,GO:0016298,GO:0016331,GO:0016787,GO:0016788,GO:0017144,GO:0019637,GO:0030258,GO:0030334,GO:0030335,GO:0031347,GO:0031349,GO:0031984,GO:0032101,GO:0032103,GO:0032501,GO:0032502,GO:0032879,GO:0032991,GO:0032994,GO:0033554,GO:0034358,GO:0034362,GO:0034367,GO:0034368,GO:0034369,GO:0034374,GO:0034440,GO:0034441,GO:0034599,GO:0040012,GO:0040017,GO:0042060,GO:0042175,GO:0042221,GO:0042981,GO:0043062,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046434,GO:0046469,GO:0046486,GO:0047499,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048598,GO:0048729,GO:0048856,GO:0050727,GO:0050729,GO:0050789,GO:0050794,GO:0050817,GO:0050878,GO:0050896,GO:0050920,GO:0050921,GO:0051270,GO:0051272,GO:0051716,GO:0052689,GO:0055114,GO:0060429,GO:0060548,GO:0065007,GO:0065008,GO:0070887,GO:0071675,GO:0071677,GO:0071704,GO:0071825,GO:0071827,GO:0071840,GO:0080134,GO:0090025,GO:0090026,GO:0097006,GO:0097164,GO:0098827,GO:1901564,GO:1901575,GO:1990777,GO:2000145,GO:2000147 3.1.1.47 ko:K01062 ko00565,ko01100,ko01110,ko01130,map00565,map01100,map01110,map01130 - R04452 RC00037,RC00094 ko00000,ko00001,ko01000 - - - PAF-AH_p_II HSJS2_k127_2556741_2 118166.JH976537_gene2126 4.289e-31 130.0 COG0451@1|root,COG0451@2|Bacteria,1G48F@1117|Cyanobacteria,1H82K@1150|Oscillatoriales 1117|Cyanobacteria GM Nad-dependent epimerase dehydratase - - - - - - - - - - - - Epimerase HSJS2_k127_2556741_0 580332.Slit_2268 2.101e-45 178.0 COG3797@1|root,COG3797@2|Bacteria,1N0SN@1224|Proteobacteria,2WAUM@28216|Betaproteobacteria,44WGD@713636|Nitrosomonadales 28216|Betaproteobacteria S Protein of unknown function (DUF1697) - - - - - - - - - - - - DUF1697 HSJS2_k127_2556741_1 1121378.KB899771_gene644 2.865e-45 176.0 COG0697@1|root,COG0697@2|Bacteria 2|Bacteria EG spore germination ydzE - - - - - - - - - - - EamA HSJS2_k127_256960_1 404589.Anae109_1579 2.081e-80 276.0 COG0705@1|root,COG0705@2|Bacteria,1MYFP@1224|Proteobacteria,42P0V@68525|delta/epsilon subdivisions,2WJGR@28221|Deltaproteobacteria,2YVSU@29|Myxococcales 28221|Deltaproteobacteria S Rhomboid family - - - - - - - - - - - - Rhomboid HSJS2_k127_256960_0 743721.Psesu_0508 3.832e-126 422.0 COG1972@1|root,COG1972@2|Bacteria,1MXXX@1224|Proteobacteria,1RMBX@1236|Gammaproteobacteria,1X3AE@135614|Xanthomonadales 135614|Xanthomonadales F Na dependent nucleoside transporter yeiM - - ko:K03317 - - - - ko00000 2.A.41 - - Gate,Nucleos_tra2_C,Nucleos_tra2_N HSJS2_k127_256960_3 986075.CathTA2_2027 3.101e-67 256.0 COG0005@1|root,COG0005@2|Bacteria,1TQ37@1239|Firmicutes,4HABP@91061|Bacilli 91061|Bacilli F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate punA - 2.4.2.1,2.4.2.28 ko:K00772,ko:K03783 ko00230,ko00240,ko00270,ko00760,ko01100,ko01110,map00230,map00240,map00270,map00760,map01100,map01110 M00034 R01402,R01561,R01863,R01969,R02147,R02294,R02295,R02297,R02484,R02557,R02748,R08368,R10244 RC00033,RC00063,RC00122,RC02819 ko00000,ko00001,ko00002,ko01000 - - - PNP_UDP_1 HSJS2_k127_256960_2 604331.AUHY01000011_gene220 2.625e-68 247.0 COG0351@1|root,COG0351@2|Bacteria,1WIN0@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus H Phosphomethylpyrimidine kinase thiD - 2.7.1.49,2.7.4.7 ko:K00941 ko00730,ko01100,map00730,map01100 M00127 R03471,R04509 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - Phos_pyr_kin HSJS2_k127_256960_4 867903.ThesuDRAFT_01699 1.745e-17 94.0 COG0566@1|root,COG0566@2|Bacteria,1V3JP@1239|Firmicutes,248DV@186801|Clostridia,3WCM9@538999|Clostridiales incertae sedis 186801|Clostridia J SpoU rRNA Methylase family spoU - - ko:K03437 - - - - ko00000,ko03016 - - - SpoU_methylase,SpoU_sub_bind HSJS2_k127_2577866_5 1313304.CALK_0414 0.0002643 43.0 COG1127@1|root,COG1127@2|Bacteria 2|Bacteria Q ATPase activity mkl - - ko:K02065 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - ABC_tran HSJS2_k127_2577866_1 861299.J421_3475 9.631e-67 240.0 COG1463@1|root,COG1463@2|Bacteria 2|Bacteria Q ABC-type transport system involved in resistance to organic solvents, periplasmic component ttg2C - - ko:K02067 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - MlaD HSJS2_k127_2577866_3 861299.J421_0057 2.443e-38 150.0 COG0782@1|root,COG0782@2|Bacteria,1ZTPD@142182|Gemmatimonadetes 142182|Gemmatimonadetes K Transcription elongation factor, N-terminal - - - ko:K03624 - - - - ko00000,ko03021 - - - GreA_GreB,GreA_GreB_N HSJS2_k127_2577866_2 861299.J421_3386 4.023e-57 204.0 COG1762@1|root,COG1762@2|Bacteria,1ZTIY@142182|Gemmatimonadetes 142182|Gemmatimonadetes G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 - - - ko:K02806 ko02060,map02060 - - - ko00000,ko00001,ko01000,ko02000 - - - PTS_EIIA_2 HSJS2_k127_2577866_4 1121403.AUCV01000032_gene2884 2.155e-07 61.0 COG1579@1|root,COG1579@2|Bacteria,1R7GT@1224|Proteobacteria,42P3S@68525|delta/epsilon subdivisions,2WKVG@28221|Deltaproteobacteria,2MJ11@213118|Desulfobacterales 28221|Deltaproteobacteria S C4-type zinc ribbon domain - - - ko:K07164 - - - - ko00000 - - - zf-RING_7 HSJS2_k127_2577866_0 251221.35214024 6.03e-205 653.0 COG0591@1|root,COG0591@2|Bacteria,1G1JV@1117|Cyanobacteria 1117|Cyanobacteria E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family putP - - - - - - - - - - - SSF HSJS2_k127_257847_3 861299.J421_2882 7.09e-16 87.0 COG0718@1|root,COG0718@2|Bacteria,1ZU1F@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection - - - ko:K09747 - - - - ko00000 - - - YbaB_DNA_bd HSJS2_k127_257847_0 861299.J421_2883 6.908e-70 243.0 COG0353@1|root,COG0353@2|Bacteria,1ZTJX@142182|Gemmatimonadetes 142182|Gemmatimonadetes L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO recR - - ko:K06187 ko03440,map03440 - - - ko00000,ko00001,ko03400 - - - RecR,Toprim_4 HSJS2_k127_257847_2 1379270.AUXF01000005_gene388 3.75e-20 93.0 29142@1|root,2ZNRG@2|Bacteria,1ZV6W@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_257847_1 649638.Trad_1082 2.668e-21 103.0 COG1100@1|root,COG1100@2|Bacteria,1WJAD@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S PFAM ADP-ribosylation factor family - - - ko:K06883 - - - - ko00000 - - - Arf HSJS2_k127_2580979_0 869210.Marky_1642 2.414e-181 576.0 COG3033@1|root,COG3033@2|Bacteria,1WM62@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus E PFAM aromatic amino acid beta-eliminating lyase threonine aldolase tnaA - 4.1.99.1 ko:K01667 ko00380,map00380 - R00673 RC00209,RC00355 ko00000,ko00001,ko01000 - - - Beta_elim_lyase HSJS2_k127_2580979_1 861299.J421_2433 3.272e-60 214.0 COG2316@1|root,COG2316@2|Bacteria,1ZTH6@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Metal dependent phosphohydrolases with conserved 'HD' motif. - - - - - - - - - - - - HD HSJS2_k127_2580979_2 1125863.JAFN01000001_gene1637 7.643e-44 167.0 COG0389@1|root,COG0389@2|Bacteria,1MUUH@1224|Proteobacteria,42NGG@68525|delta/epsilon subdivisions,2WIVT@28221|Deltaproteobacteria 28221|Deltaproteobacteria L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII dinB - 2.7.7.7 ko:K02346 - - - - ko00000,ko01000,ko03400 - - - IMS,IMS_C,IMS_HHH HSJS2_k127_2590674_6 1121918.ARWE01000001_gene3150 2.15e-46 172.0 COG3158@1|root,COG3158@2|Bacteria,1MUVH@1224|Proteobacteria,42P5Y@68525|delta/epsilon subdivisions,2WJEH@28221|Deltaproteobacteria 28221|Deltaproteobacteria P Transport of potassium into the cell kup - - ko:K03549 - - - - ko00000,ko02000 2.A.72 - - K_trans HSJS2_k127_2590674_3 104623.Ser39006_02654 3.337e-76 270.0 COG1808@1|root,COG1808@2|Bacteria,1NMS3@1224|Proteobacteria,1RRTC@1236|Gammaproteobacteria 1236|Gammaproteobacteria I Domain of unknown function (DUF389) - - - - - - - - - - - - DUF389 HSJS2_k127_2590674_2 439235.Dalk_1753 7.474e-109 360.0 COG0300@1|root,COG0623@1|root,COG0300@2|Bacteria,COG0623@2|Bacteria,1R090@1224|Proteobacteria,43CRU@68525|delta/epsilon subdivisions,2X7ZF@28221|Deltaproteobacteria 28221|Deltaproteobacteria I Enoyl-(Acyl carrier protein) reductase - - - - - - - - - - - - adh_short_C2 HSJS2_k127_2590674_1 391625.PPSIR1_07757 6.267e-119 399.0 COG0332@1|root,COG0332@2|Bacteria,1RB9M@1224|Proteobacteria,42YNV@68525|delta/epsilon subdivisions,2WTQM@28221|Deltaproteobacteria,2YYYC@29|Myxococcales 28221|Deltaproteobacteria I 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III - - 2.3.1.180 ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00082,M00083 R10707 RC00004,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - ACP_syn_III,ACP_syn_III_C HSJS2_k127_2590674_4 56780.SYN_01697 3.59e-65 244.0 COG0764@1|root,COG0764@2|Bacteria,1MWV8@1224|Proteobacteria 1224|Proteobacteria I Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length fabA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0008693,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016860,GO:0016863,GO:0019171,GO:0019752,GO:0032787,GO:0034017,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0047451,GO:0071704,GO:0072330,GO:1901576 4.2.1.59,5.3.3.14 ko:K01716 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00083 R04428,R04535,R04537,R04544,R04568,R04954,R04965,R07639 RC00831,RC01078,RC01095 ko00000,ko00001,ko00002,ko01000,ko01004 - - iAF1260.b0954,iB21_1397.B21_00965,iBWG_1329.BWG_0806,iE2348C_1286.E2348C_0940,iEC042_1314.EC042_1039,iECBD_1354.ECBD_2641,iECB_1328.ECB_00958,iECDH10B_1368.ECDH10B_1024,iECD_1391.ECD_00958,iECED1_1282.ECED1_0977,iECH74115_1262.ECH74115_1118,iECIAI1_1343.ECIAI1_0995,iECIAI39_1322.ECIAI39_2193,iECNA114_1301.ECNA114_1032,iECO103_1326.ECO103_1000,iECO111_1330.ECO111_1022,iECO26_1355.ECO26_1081,iECOK1_1307.ECOK1_1013,iECS88_1305.ECS88_0975,iECSF_1327.ECSF_0868,iECSP_1301.ECSP_1060,iECUMN_1333.ECUMN_1143,iECW_1372.ECW_m1064,iECs_1301.ECs1038,iEKO11_1354.EKO11_2876,iETEC_1333.ETEC_1024,iEcE24377_1341.EcE24377A_1068,iEcHS_1320.EcHS_A1063,iEcSMS35_1347.EcSMS35_2166,iEcolC_1368.EcolC_2642,iG2583_1286.G2583_1189,iJO1366.b0954,iJR904.b0954,iLF82_1304.LF82_0604,iSBO_1134.SBO_2277,iSDY_1059.SDY_0927,iSF_1195.SF0954,iSSON_1240.SSON_0958,iSbBS512_1146.SbBS512_E2362,iUMNK88_1353.UMNK88_1108,iWFL_1372.ECW_m1064,iY75_1357.Y75_RS04955,iZ_1308.Z1304,ic_1306.c1090 FabA HSJS2_k127_2590674_7 889378.Spiaf_2285 6.92e-45 177.0 COG0764@1|root,COG0764@2|Bacteria 2|Bacteria I 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity fabZ - 4.2.1.59 ko:K02372 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04428,R04535,R04537,R04544,R04568,R04954,R04965,R07764,R10117,R10121 RC00831,RC01095 ko00000,ko00001,ko00002,ko01000,ko01004 - - - FabA HSJS2_k127_2590674_0 56780.SYN_01694 7.268e-173 569.0 COG0304@1|root,COG0304@2|Bacteria,1MU1X@1224|Proteobacteria,42MUZ@68525|delta/epsilon subdivisions,2WJT6@28221|Deltaproteobacteria,2MQ97@213462|Syntrophobacterales 28221|Deltaproteobacteria I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP - - 2.3.1.41 ko:K00647 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119 RC00039,RC02728,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Ketoacyl-synt_C,ketoacyl-synt HSJS2_k127_2590674_8 889378.Spiaf_2287 6.486e-21 95.0 COG0236@1|root,COG0236@2|Bacteria 2|Bacteria IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis - GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - ko:K02078 - - - - ko00000,ko00001 - - - PP-binding HSJS2_k127_2590674_5 56780.SYN_01692 1.261e-50 188.0 COG0204@1|root,COG0204@2|Bacteria,1P3XM@1224|Proteobacteria 1224|Proteobacteria I Phosphate acyltransferases - - - - - - - - - - - - Acyltransferase HSJS2_k127_2590674_9 1469557.JSWF01000028_gene3023 0.0004037 52.0 COG2091@1|root,COG2091@2|Bacteria,4PMQE@976|Bacteroidetes 976|Bacteroidetes H Belongs to the P-Pant transferase superfamily - - - - - - - - - - - - ACPS HSJS2_k127_2598599_0 118161.KB235922_gene5786 6.091e-99 333.0 COG0053@1|root,COG0053@2|Bacteria,1G361@1117|Cyanobacteria,3VM1Q@52604|Pleurocapsales 1117|Cyanobacteria P Cation efflux family - - - - - - - - - - - - Cation_efflux,ZT_dimer HSJS2_k127_2598599_1 1313421.JHBV01000039_gene2728 4.862e-32 133.0 294EW@1|root,2ZRUR@2|Bacteria,4NPA3@976|Bacteroidetes 976|Bacteroidetes S Protein of unknown function (DUF1569) - - - - - - - - - - - - DUF1569 HSJS2_k127_2599969_2 404589.Anae109_4499 6.149e-30 124.0 COG0071@1|root,COG0071@2|Bacteria,1N7C7@1224|Proteobacteria,42U0T@68525|delta/epsilon subdivisions,2WQ7I@28221|Deltaproteobacteria 28221|Deltaproteobacteria O Belongs to the small heat shock protein (HSP20) family hspA-1 - - ko:K13993 ko04141,map04141 - - - ko00000,ko00001,ko03110 - - - HSP20 HSJS2_k127_2599969_0 28072.Nos7524_2763 5.821e-145 473.0 COG0517@1|root,COG1994@1|root,COG0517@2|Bacteria,COG1994@2|Bacteria,1GC0N@1117|Cyanobacteria,1HR0M@1161|Nostocales 1117|Cyanobacteria S Belongs to the peptidase M50B family - - - - - - - - - - - - CBS,Peptidase_M50 HSJS2_k127_2599969_1 240292.Ava_C0139 1.056e-56 206.0 COG2823@1|root,COG2823@2|Bacteria,1GBV7@1117|Cyanobacteria,1HPUI@1161|Nostocales 1117|Cyanobacteria S bacterial OsmY and nodulation domain - - - - - - - - - - - - BON HSJS2_k127_2599969_5 1236959.BAMT01000001_gene1432 1.01e-07 59.0 2DNS2@1|root,32YVY@2|Bacteria,1N9QQ@1224|Proteobacteria,2VY3B@28216|Betaproteobacteria 28216|Betaproteobacteria - - - - - - - - - - - - - - - HSJS2_k127_2599969_4 330214.NIDE4245 4.549e-25 117.0 COG1595@1|root,COG1595@2|Bacteria,3J1A1@40117|Nitrospirae 40117|Nitrospirae K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 HSJS2_k127_2599969_3 349124.Hhal_2355 2.319e-27 113.0 COG1690@1|root,COG1690@2|Bacteria,1MUHA@1224|Proteobacteria,1RMXH@1236|Gammaproteobacteria,1WW29@135613|Chromatiales 135613|Chromatiales S PFAM Uncharacterised protein family UPF0027 rtcB - 6.5.1.3 ko:K14415 - - - - ko00000,ko01000,ko03016 - - - RtcB HSJS2_k127_2612525_0 1089550.ATTH01000001_gene1477 2.67e-137 443.0 COG5276@1|root,COG5276@2|Bacteria,4NDUD@976|Bacteroidetes,1FIMC@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes S repeat protein - - - - - - - - - - - - CarboxypepD_reg,LVIVD,MAM,TSP_3,fn3 HSJS2_k127_2612525_1 309807.SRU_2333 2.116e-112 375.0 COG1804@1|root,COG1804@2|Bacteria,4NEA8@976|Bacteroidetes,1FK8Y@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes C CoA-transferase family III - - - - - - - - - - - - CoA_transf_3 HSJS2_k127_2612525_2 1267535.KB906767_gene4240 1.134e-08 64.0 COG0457@1|root,COG3710@1|root,COG5616@1|root,COG0457@2|Bacteria,COG3710@2|Bacteria,COG5616@2|Bacteria,3Y2HR@57723|Acidobacteria,2JI02@204432|Acidobacteriia 204432|Acidobacteriia KLT Tetratricopeptide repeats - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase,Trans_reg_C HSJS2_k127_261387_1 1205680.CAKO01000041_gene5517 8.769e-111 366.0 COG0152@1|root,COG0152@2|Bacteria,1MUR9@1224|Proteobacteria,2TS0T@28211|Alphaproteobacteria,2JPCI@204441|Rhodospirillales 204441|Rhodospirillales F SAICAR synthetase - - 6.3.2.6 ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04591 RC00064,RC00162 ko00000,ko00001,ko00002,ko01000 - - - SAICAR_synt HSJS2_k127_261387_3 861299.J421_3377 1.49e-15 89.0 COG1828@1|root,COG1828@2|Bacteria,1ZU3W@142182|Gemmatimonadetes 142182|Gemmatimonadetes F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL purS - 6.3.5.3 ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04463 RC00010,RC01160 ko00000,ko00001,ko00002,ko01000 - - - PurS HSJS2_k127_261387_2 518766.Rmar_2306 7.255e-90 307.0 COG0047@1|root,COG0047@2|Bacteria,4NFER@976|Bacteroidetes,1FIWZ@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL purQ - 6.3.5.3 ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04463 RC00010,RC01160 ko00000,ko00001,ko00002,ko01000 - - - GATase_5 HSJS2_k127_261387_0 379066.GAU_1737 1.364e-260 835.0 COG0046@1|root,COG0046@2|Bacteria,1ZT8W@142182|Gemmatimonadetes 142182|Gemmatimonadetes F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL purL - 6.3.5.3 ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04463 RC00010,RC01160 ko00000,ko00001,ko00002,ko01000 - - - AIRS,AIRS_C HSJS2_k127_2652231_0 545697.HMPREF0216_00974 2.148e-93 322.0 COG0557@1|root,COG0557@2|Bacteria,1TQ1G@1239|Firmicutes,247ZS@186801|Clostridia,36E8U@31979|Clostridiaceae 186801|Clostridia J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs rnr - - ko:K12573 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03016,ko03019 - - - OB_RNB,RNB,S1 HSJS2_k127_2652231_3 1379270.AUXF01000006_gene314 1.348e-23 112.0 COG1159@1|root,COG1159@2|Bacteria,1ZU0Y@142182|Gemmatimonadetes 142182|Gemmatimonadetes S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism - - - - - - - - - - - - - HSJS2_k127_2652231_4 1125863.JAFN01000001_gene531 6.228e-16 79.0 COG2835@1|root,COG2835@2|Bacteria,1Q1BG@1224|Proteobacteria,42WTN@68525|delta/epsilon subdivisions,2WSI9@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Belongs to the UPF0434 family - - - ko:K09791 - - - - ko00000 - - - Trm112p HSJS2_k127_2652231_1 1379270.AUXF01000006_gene315 3.565e-70 249.0 COG1159@1|root,COG1159@2|Bacteria,1ZUSE@142182|Gemmatimonadetes 142182|Gemmatimonadetes S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism era - - ko:K03595 - - - - ko00000,ko03009,ko03029 - - - KH_2,MMR_HSR1 HSJS2_k127_2652231_5 1048339.KB913029_gene3867 2.62e-10 65.0 2DR0Y@1|root,339QH@2|Bacteria,2GWIF@201174|Actinobacteria,4ETJG@85013|Frankiales 201174|Actinobacteria S Protein of unknown function (DUF4235) - - - - - - - - - - - - DUF4235 HSJS2_k127_2652231_2 926569.ANT_06050 8.784e-66 228.0 COG2193@1|root,COG2193@2|Bacteria,2G6RN@200795|Chloroflexi 200795|Chloroflexi P Ferritin-like domain - - 1.16.3.1 ko:K03594 ko00860,map00860 - R00078 RC02758 ko00000,ko00001,ko01000 - - - Ferritin HSJS2_k127_2675413_0 861299.J421_4171 1.446e-38 156.0 COG1612@1|root,COG1612@2|Bacteria,1ZURE@142182|Gemmatimonadetes 142182|Gemmatimonadetes O Cytochrome oxidase assembly protein - - - ko:K02259 ko00190,ko00860,ko01100,ko01110,ko02020,ko04714,map00190,map00860,map01100,map01110,map02020,map04714 M00154 R07412 RC00769 ko00000,ko00001,ko00002,ko03029 3.D.4.4 - - COX15-CtaA HSJS2_k127_2675413_1 861299.J421_4174 3.027e-32 133.0 COG1132@1|root,COG1132@2|Bacteria,1ZSP1@142182|Gemmatimonadetes 142182|Gemmatimonadetes V ABC transporter transmembrane region - - - - - - - - - - - - ABC_membrane,ABC_tran HSJS2_k127_2684664_5 1219065.VPR01S_01_03230 6.25e-52 189.0 28PFD@1|root,2ZC6I@2|Bacteria,1R8PT@1224|Proteobacteria,1S2BA@1236|Gammaproteobacteria,1XWFU@135623|Vibrionales 135623|Vibrionales - - VP2004 - - - - - - - - - - - - HSJS2_k127_2684664_4 479434.Sthe_0472 1.074e-55 207.0 COG0164@1|root,COG0164@2|Bacteria,2G6KR@200795|Chloroflexi,27YAF@189775|Thermomicrobia 189775|Thermomicrobia L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids rnhB - 3.1.26.4 ko:K03470 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - RNase_HII HSJS2_k127_2684664_6 292459.STH1471 3.847e-41 164.0 COG0335@1|root,COG0335@2|Bacteria,1V6FT@1239|Firmicutes,24J83@186801|Clostridia 186801|Clostridia J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site rplS - - ko:K02884 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L19 HSJS2_k127_2684664_2 861299.J421_3824 2.331e-87 293.0 COG0336@1|root,COG0336@2|Bacteria,1ZT8K@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Belongs to the RNA methyltransferase TrmD family trmD - 2.1.1.228 ko:K00554 - - R00597 RC00003,RC00334 ko00000,ko01000,ko03016 - - - tRNA_m1G_MT HSJS2_k127_2684664_8 926556.Echvi_1339 3.023e-21 101.0 COG0806@1|root,COG0806@2|Bacteria,4NQF0@976|Bacteroidetes,47QUB@768503|Cytophagia 976|Bacteroidetes J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes rimM - - ko:K02860 - - - - ko00000,ko03009 - - - PRC,RimM HSJS2_k127_2684664_9 525903.Taci_1417 5.36e-18 91.0 COG0228@1|root,COG0228@2|Bacteria,3TBDH@508458|Synergistetes 508458|Synergistetes J Belongs to the bacterial ribosomal protein bS16 family rpsP - - ko:K02959 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011,ko03029 - - - Ribosomal_S16 HSJS2_k127_2684664_0 1293054.HSACCH_01221 2.748e-132 436.0 COG0541@1|root,COG0541@2|Bacteria,1TP06@1239|Firmicutes,248EU@186801|Clostridia,3WAIA@53433|Halanaerobiales 186801|Clostridia U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY ffh - 3.6.5.4 ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko01000,ko02044 3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9 - - SRP54,SRP54_N,SRP_SPB HSJS2_k127_2684664_1 240015.ACP_2260 1.808e-120 414.0 COG0104@1|root,COG0104@2|Bacteria,3Y2Z9@57723|Acidobacteria,2JIIV@204432|Acidobacteriia 204432|Acidobacteriia F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP purA - 6.3.4.4 ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 M00049 R01135 RC00458,RC00459 ko00000,ko00001,ko00002,ko01000 - - - Adenylsucc_synt HSJS2_k127_2684664_3 861299.J421_2804 1.447e-60 221.0 COG0329@1|root,COG0329@2|Bacteria,1ZTGV@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Dihydrodipicolinate synthetase family - - - - - - - - - - - - DHDPS HSJS2_k127_2684664_7 644966.Tmar_1095 1.106e-37 146.0 COG0111@1|root,COG0111@2|Bacteria,1TSDK@1239|Firmicutes,247Q4@186801|Clostridia 186801|Clostridia EH D-isomer specific 2-hydroxyacid dehydrogenase - - 1.1.1.79,1.1.1.81 ko:K12972 ko00260,ko00620,ko00630,ko01100,ko01110,ko01120,map00260,map00620,map00630,map01100,map01110,map01120 - R00465,R01388,R01392,R02527 RC00031,RC00042,RC00670 ko00000,ko00001,ko01000 - - - 2-Hacid_dh,2-Hacid_dh_C HSJS2_k127_2688130_3 321327.CYA_1555 4.056e-27 122.0 COG1117@1|root,COG1117@2|Bacteria,1G0P6@1117|Cyanobacteria,1GYK5@1129|Synechococcus 1117|Cyanobacteria P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system pstB-1 - 3.6.3.27 ko:K02036 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.7 - - ABC_tran HSJS2_k127_2688130_1 518766.Rmar_1827 5.552e-103 346.0 COG0581@1|root,COG0581@2|Bacteria,4NGBA@976|Bacteroidetes,1FIYE@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes P Binding-protein-dependent transport system inner membrane component pstA - - ko:K02038 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - BPD_transp_1 HSJS2_k127_2688130_0 344747.PM8797T_06617 9.159e-114 374.0 COG0573@1|root,COG0573@2|Bacteria,2IZ0E@203682|Planctomycetes 203682|Planctomycetes P probably responsible for the translocation of the substrate across the membrane - - - ko:K02037 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - BPD_transp_1 HSJS2_k127_2688130_2 344747.PM8797T_06622 9.445e-51 184.0 COG0226@1|root,COG0226@2|Bacteria,2IYX0@203682|Planctomycetes 203682|Planctomycetes P COG0226 ABC-type phosphate transport system periplasmic - - - ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - PBP_like,PBP_like_2 HSJS2_k127_2689124_0 1379270.AUXF01000001_gene2161 0.0 1929.0 COG0674@1|root,COG1013@1|root,COG1014@1|root,COG1145@1|root,COG1146@1|root,COG0674@2|Bacteria,COG1013@2|Bacteria,COG1014@2|Bacteria,COG1145@2|Bacteria,COG1146@2|Bacteria 2|Bacteria C 4 iron, 4 sulfur cluster binding nifJ - 1.2.7.1 ko:K03737 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00173,M00307 R01196,R10866 RC00004,RC02742 br01601,ko00000,ko00001,ko00002,ko01000 - - - EKR,Fer4,Fer4_16,Fer4_6,Fer4_7,PFOR_II,POR,POR_N,TPP_enzyme_C HSJS2_k127_2689124_1 765910.MARPU_10745 2.605e-86 297.0 COG2878@1|root,COG2878@2|Bacteria,1NZIR@1224|Proteobacteria,1RPC4@1236|Gammaproteobacteria,1WWC5@135613|Chromatiales 135613|Chromatiales C Fe-S cluster - - - ko:K03616 - - - - ko00000 - - - FeS,Fer4 HSJS2_k127_2691554_0 518766.Rmar_1199 6.012e-170 543.0 COG0001@1|root,COG0001@2|Bacteria,4NDXG@976|Bacteroidetes,1FIZB@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes H Aminotransferase class-III hemL - 5.4.3.8 ko:K01845 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R02272 RC00677 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_3 HSJS2_k127_2691554_1 338963.Pcar_0769 2.541e-92 331.0 COG0407@1|root,COG0407@2|Bacteria,1MUG1@1224|Proteobacteria,42MV9@68525|delta/epsilon subdivisions,2WJZK@28221|Deltaproteobacteria,43S1P@69541|Desulfuromonadales 28221|Deltaproteobacteria H Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III hemE GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 ko:K01599 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R03197,R04972 RC00872 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_0016 URO-D HSJS2_k127_2691554_2 861299.J421_2404 5.215e-24 106.0 2DW4B@1|root,33YGG@2|Bacteria,1ZV12@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_2699073_1 1396141.BATP01000039_gene1303 1.985e-67 238.0 COG0327@1|root,COG0327@2|Bacteria,46U7Z@74201|Verrucomicrobia,2IU4W@203494|Verrucomicrobiae 203494|Verrucomicrobiae S NIF3 (NGG1p interacting factor 3) - - - - - - - - - - - - NIF3 HSJS2_k127_2699073_0 880073.Calab_0772 5.707e-162 518.0 COG0519@1|root,COG0519@2|Bacteria,2NNRS@2323|unclassified Bacteria 2|Bacteria F Catalyzes the synthesis of GMP from XMP guaA GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.3.1.128,6.3.5.2 ko:K01951,ko:K03790 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002,ko03009 - - iLJ478.TM1820 GATase,GMP_synt_C,NAD_synthase HSJS2_k127_2704335_5 379066.GAU_1269 2.824e-15 77.0 COG0640@1|root,COG0640@2|Bacteria,1ZV07@142182|Gemmatimonadetes 142182|Gemmatimonadetes K helix_turn_helix, Arsenical Resistance Operon Repressor - - - ko:K03892 - - - - ko00000,ko03000 - - - HTH_5 HSJS2_k127_2704335_1 1267533.KB906734_gene3758 1.19e-105 349.0 COG0500@1|root,COG2226@2|Bacteria,3Y4HC@57723|Acidobacteria 57723|Acidobacteria Q Hypothetical methyltransferase - - 2.1.1.137 ko:K07755 - - - - ko00000,ko01000 - - - Methyltransf_31 HSJS2_k127_2704335_0 686340.Metal_0046 3.932e-155 511.0 COG0798@1|root,COG0798@2|Bacteria,1MUXY@1224|Proteobacteria,1RP2I@1236|Gammaproteobacteria,1XF21@135618|Methylococcales 135618|Methylococcales P PFAM Bile acid sodium symporter - - - ko:K03325 - - - - ko00000,ko02000 2.A.59 - - SBF HSJS2_k127_2704335_3 84531.JMTZ01000050_gene893 7.299e-46 172.0 COG0346@1|root,COG0346@2|Bacteria,1N08M@1224|Proteobacteria,1SZRB@1236|Gammaproteobacteria,1X7PV@135614|Xanthomonadales 135614|Xanthomonadales E COG0346 Lactoylglutathione lyase and related lyases - - - - - - - - - - - - Glyoxalase HSJS2_k127_2704335_2 323261.Noc_2416 7.712e-83 284.0 COG3485@1|root,COG3485@2|Bacteria,1MV6K@1224|Proteobacteria,1S376@1236|Gammaproteobacteria,1X1QH@135613|Chromatiales 135613|Chromatiales Q Dioxygenase - - 1.13.11.3 ko:K00449 ko00362,ko00624,ko01100,ko01120,ko01220,map00362,map00624,map01100,map01120,map01220 - R01631,R03549 RC00388,RC00953 br01602,ko00000,ko00001,ko01000 - - - Dioxygenase_C HSJS2_k127_2704335_4 926560.KE387023_gene2046 5.811e-19 90.0 2C59N@1|root,30Q9K@2|Bacteria,1WN6N@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus - - - - - - - - - - - - - - - HSJS2_k127_2706392_4 861299.J421_2972 5.37e-05 52.0 28ZEQ@1|root,2ZM6A@2|Bacteria,1ZU2C@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_2706392_1 997346.HMPREF9374_0344 4.064e-38 146.0 COG0346@1|root,COG0346@2|Bacteria,1V6SC@1239|Firmicutes,4HCP5@91061|Bacilli,27C6V@186824|Thermoactinomycetaceae 91061|Bacilli E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily mce - 5.1.99.1 ko:K05606 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00373,M00375,M00376,M00741 R02765,R09979 RC00780,RC02739 ko00000,ko00001,ko00002,ko01000 - - - Glyoxalase_4 HSJS2_k127_2706392_2 379066.GAU_1250 2.472e-35 138.0 COG3118@1|root,COG3118@2|Bacteria,1ZTS0@142182|Gemmatimonadetes 142182|Gemmatimonadetes O Thioredoxin-like domain - - - ko:K03671 ko04621,ko05418,map04621,map05418 - - - ko00000,ko00001,ko03110 - - - Thioredoxin HSJS2_k127_2706392_0 861299.J421_2975 6.933e-62 224.0 COG0313@1|root,COG0313@2|Bacteria,1ZTK1@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA rsmI - 2.1.1.198 ko:K07056 - - - - ko00000,ko01000,ko03009 - - - TP_methylase HSJS2_k127_2706392_3 861299.J421_2977 7.534e-12 77.0 COG1196@1|root,COG4942@1|root,COG1196@2|Bacteria,COG4942@2|Bacteria,1ZSU8@142182|Gemmatimonadetes 142182|Gemmatimonadetes D nuclear chromosome segregation - - - - - - - - - - - - - HSJS2_k127_2708824_3 517418.Ctha_1282 3.04e-50 183.0 COG4247@1|root,COG4247@2|Bacteria,1FEBY@1090|Chlorobi 1090|Chlorobi I 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) - - 3.1.3.8 ko:K01083 ko00562,map00562 - R03371 RC00078 ko00000,ko00001,ko01000 - - - Phytase HSJS2_k127_2708824_2 1210884.HG799463_gene9434 1.316e-97 340.0 COG1524@1|root,COG1524@2|Bacteria,2J1VF@203682|Planctomycetes 203682|Planctomycetes P Type I phosphodiesterase / nucleotide pyrophosphatase - - - - - - - - - - - - Phosphodiest HSJS2_k127_2708824_0 1089550.ATTH01000001_gene1363 4.9e-244 764.0 COG4146@1|root,COG4146@2|Bacteria,4NE9S@976|Bacteroidetes,1FJZQ@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes S Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - ko:K03307 - - - - ko00000 2.A.21 - - SSF HSJS2_k127_2708824_1 1210884.HG799465_gene12236 1.624e-124 406.0 COG1506@1|root,COG1506@2|Bacteria,2IYRT@203682|Planctomycetes 203682|Planctomycetes E Dipeptidyl peptidase IV (DPP IV) - - 3.4.14.5 ko:K01278 ko04974,map04974 - - - ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 - - - DPPIV_N,Peptidase_S9 HSJS2_k127_2716171_8 1232437.KL662045_gene2159 3.09e-36 138.0 COG0050@1|root,COG0050@2|Bacteria,1MVC0@1224|Proteobacteria,42MWZ@68525|delta/epsilon subdivisions,2WJ2B@28221|Deltaproteobacteria,2MHTQ@213118|Desulfobacterales 28221|Deltaproteobacteria J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis tuf - - ko:K02358 - - - - ko00000,ko03012,ko03029,ko04147 - - - GTP_EFTU,GTP_EFTU_D2,GTP_EFTU_D3 HSJS2_k127_2716171_2 861299.J421_2757 1.678e-133 452.0 COG0215@1|root,COG0215@2|Bacteria,1ZT77@142182|Gemmatimonadetes 142182|Gemmatimonadetes J DALR_2 cysS - 6.1.1.16 ko:K01883 ko00970,map00970 M00359,M00360 R03650 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - DALR_2,tRNA-synt_1e HSJS2_k127_2716171_0 290512.Paes_1739 3.464e-227 719.0 COG0449@1|root,COG0449@2|Bacteria,1FEMH@1090|Chlorobi 1090|Chlorobi M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source - - 2.6.1.16 ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 - R00768 RC00010,RC00163,RC02752 ko00000,ko00001,ko01000,ko01002 - - - GATase_6,SIS HSJS2_k127_2716171_3 861299.J421_3894 1.03e-127 424.0 COG1109@1|root,COG1109@2|Bacteria,1ZSNW@142182|Gemmatimonadetes 142182|Gemmatimonadetes G Phosphoglucomutase/phosphomannomutase, C-terminal domain - - 5.4.2.8 ko:K01840 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 M00114 R01818 RC00408 ko00000,ko00001,ko00002,ko01000 - - - PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV HSJS2_k127_2716171_13 118168.MC7420_7189 0.0001157 50.0 COG1943@1|root,COG1943@2|Bacteria,1G5SV@1117|Cyanobacteria,1HBAQ@1150|Oscillatoriales 1117|Cyanobacteria L Transposase IS200 like - - - - - - - - - - - - Y1_Tnp HSJS2_k127_2716171_1 861299.J421_3896 1.319e-134 439.0 COG0626@1|root,COG0626@2|Bacteria,1ZT9F@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Cys/Met metabolism PLP-dependent enzyme - - 4.4.1.1 ko:K01758 ko00260,ko00270,ko00450,ko01100,ko01130,ko01230,map00260,map00270,map00450,map01100,map01130,map01230 M00338 R00782,R01001,R02408,R04770,R04930,R09366 RC00056,RC00069,RC00348,RC00382,RC00710,RC01209,RC01210,RC01245,RC02303 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Cys_Met_Meta_PP HSJS2_k127_2716171_5 1121904.ARBP01000003_gene6376 1.012e-83 291.0 COG0501@1|root,COG0501@2|Bacteria,4NT8D@976|Bacteroidetes,47RHS@768503|Cytophagia 976|Bacteroidetes O Peptidase family M48 - - - - - - - - - - - - Peptidase_M48,zf-ribbon_3 HSJS2_k127_2716171_7 1121875.KB907553_gene24 7.047e-38 159.0 COG0412@1|root,COG1262@1|root,COG2114@1|root,COG0412@2|Bacteria,COG1262@2|Bacteria,COG2114@2|Bacteria,4PPKM@976|Bacteroidetes 976|Bacteroidetes T Adenylyl- / guanylyl cyclase, catalytic domain - - - - - - - - - - - - Guanylate_cyc HSJS2_k127_2716171_11 1121904.ARBP01000052_gene3650 1.266e-14 87.0 COG1073@1|root,COG1073@2|Bacteria 2|Bacteria S thiolester hydrolase activity - - - ko:K06889 - - - - ko00000 - - - AXE1,Hydrolase_4 HSJS2_k127_2716171_4 1048834.TC41_0528 7.102e-120 405.0 COG0151@1|root,COG0151@2|Bacteria,1UHN9@1239|Firmicutes,4HA70@91061|Bacilli 91061|Bacilli F Belongs to the GARS family purD - 6.3.4.13 ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04144 RC00090,RC00166 ko00000,ko00001,ko00002,ko01000 - - iSB619.SA_RS05245,iYO844.BSU06530 GARS_A,GARS_C,GARS_N HSJS2_k127_2716171_6 867903.ThesuDRAFT_02137 1.461e-53 213.0 COG0266@1|root,COG0266@2|Bacteria,1TPM9@1239|Firmicutes,24BH2@186801|Clostridia,3WDBI@538999|Clostridiales incertae sedis 186801|Clostridia L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates fpg - 3.2.2.23,4.2.99.18 ko:K10563 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Fapy_DNA_glyco,H2TH,zf-FPG_IleRS HSJS2_k127_2716171_9 379066.GAU_2436 1.524e-31 131.0 COG0622@1|root,COG0622@2|Bacteria,1ZTSV@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Calcineurin-like phosphoesterase superfamily domain - - - ko:K07095 - - - - ko00000 - - - Metallophos_2 HSJS2_k127_2716171_10 861299.J421_3908 7.227e-19 89.0 COG1595@1|root,COG1595@2|Bacteria,1ZT3B@142182|Gemmatimonadetes 142182|Gemmatimonadetes K ECF sigma factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 HSJS2_k127_2721923_1 479434.Sthe_3254 9.356e-24 117.0 COG1287@1|root,COG1287@2|Bacteria,2G75T@200795|Chloroflexi,27XID@189775|Thermomicrobia 189775|Thermomicrobia S Dolichyl-phosphate-mannose-protein mannosyltransferase - - - - - - - - - - - - PMT_2 HSJS2_k127_2721923_0 56110.Oscil6304_1375 9.892e-88 311.0 COG0463@1|root,COG0463@2|Bacteria,1GBNJ@1117|Cyanobacteria,1HF7Y@1150|Oscillatoriales 1117|Cyanobacteria M PFAM Glycosyl transferase family 2 - - - ko:K20534 - - - - ko00000,ko01000,ko01005,ko02000 4.D.2.1.9 GT2 - Glycos_transf_2 HSJS2_k127_2721923_2 886293.Sinac_5032 1.833e-23 109.0 COG1807@1|root,COG1807@2|Bacteria,2J2ND@203682|Planctomycetes 203682|Planctomycetes M Dolichyl-phosphate-mannose-protein mannosyltransferase - - - - - - - - - - - - - HSJS2_k127_2730736_1 215803.DB30_1787 3.183e-08 56.0 COG0454@1|root,COG0456@2|Bacteria,1RAJC@1224|Proteobacteria,42WFD@68525|delta/epsilon subdivisions,2WS1W@28221|Deltaproteobacteria,2YXI3@29|Myxococcales 28221|Deltaproteobacteria K Acetyltransferase (GNAT) domain - - - ko:K03828 - - - - ko00000,ko01000 - - - Acetyltransf_1 HSJS2_k127_2730736_0 264732.Moth_1680 3.116e-212 685.0 COG0317@1|root,COG0317@2|Bacteria,1TNYZ@1239|Firmicutes,2489A@186801|Clostridia,42F3U@68295|Thermoanaerobacterales 186801|Clostridia KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance relA - 2.7.6.5 ko:K00951 ko00230,map00230 - R00429 RC00002,RC00078 ko00000,ko00001,ko01000 - - iHN637.CLJU_RS16615 ACT_4,HD_4,RelA_SpoT,TGS HSJS2_k127_2735039_2 1122919.KB905640_gene397 1.01e-10 66.0 COG5528@1|root,COG5528@2|Bacteria,1VW9Q@1239|Firmicutes,4HWSC@91061|Bacilli,26YQB@186822|Paenibacillaceae 91061|Bacilli S Predicted integral membrane protein (DUF2269) - - - - - - - - - - - - DUF2269 HSJS2_k127_2735039_1 1380391.JIAS01000015_gene215 4.609e-21 104.0 COG0515@1|root,COG0515@2|Bacteria,1QZ10@1224|Proteobacteria 1224|Proteobacteria KLT Domain of unknown function (DUF4328) - - - - - - - - - - - - DUF4328 HSJS2_k127_2735039_0 1121930.AQXG01000001_gene1261 5.359e-157 504.0 COG0841@1|root,COG0841@2|Bacteria,4NGCI@976|Bacteroidetes 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran HSJS2_k127_2759210_1 420246.GTNG_1104 2.794e-68 243.0 COG0264@1|root,COG0264@2|Bacteria,1TPFJ@1239|Firmicutes,4HBDV@91061|Bacilli,1WFZI@129337|Geobacillus 91061|Bacilli J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome tsf GO:0001871,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005623,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010467,GO:0019538,GO:0030246,GO:0030247,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2001065 - ko:K02357 - - - - ko00000,ko03012,ko03029 - - - EF_TS HSJS2_k127_2759210_0 1379270.AUXF01000006_gene121 5.027e-96 321.0 COG0528@1|root,COG0528@2|Bacteria,1ZSY2@142182|Gemmatimonadetes 142182|Gemmatimonadetes F Catalyzes the reversible phosphorylation of UMP to UDP pyrH - 2.7.4.22 ko:K09903 ko00240,ko01100,map00240,map01100 - R00158 RC00002 ko00000,ko00001,ko01000 - - - AA_kinase HSJS2_k127_2759210_2 373903.Hore_07680 3.762e-49 181.0 COG0233@1|root,COG0233@2|Bacteria,1V1F2@1239|Firmicutes,24HWS@186801|Clostridia,3WBE9@53433|Halanaerobiales 186801|Clostridia J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another frr - - ko:K02838 - - - - ko00000,ko03012 - - - RRF HSJS2_k127_2759210_3 861299.J421_3040 5.073e-42 174.0 COG0037@1|root,COG0037@2|Bacteria,1ZTK2@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine tilS - 6.3.4.19 ko:K04075 - - R09597 RC02633,RC02634 ko00000,ko01000,ko03016 - - - ATP_bind_3,TilS_C HSJS2_k127_276480_5 1121472.AQWN01000002_gene2055 7.554e-18 85.0 COG0256@1|root,COG0256@2|Bacteria,1V6DM@1239|Firmicutes,24JCS@186801|Clostridia,2627U@186807|Peptococcaceae 186801|Clostridia J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance rplR - - ko:K02881 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L18p HSJS2_k127_276480_2 572479.Hprae_1670 2.199e-60 213.0 COG0098@1|root,COG0098@2|Bacteria,1V1B1@1239|Firmicutes,24G5D@186801|Clostridia,3WAKQ@53433|Halanaerobiales 186801|Clostridia J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body rpsE - - ko:K02988 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S5,Ribosomal_S5_C HSJS2_k127_276480_6 351607.Acel_0324 8.388e-12 69.0 COG1841@1|root,COG1841@2|Bacteria,2GQV0@201174|Actinobacteria,4ETGZ@85013|Frankiales 201174|Actinobacteria J Ribosomal protein L30 rpmD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02907 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L30 HSJS2_k127_276480_4 667014.Thein_1482 1.832e-39 154.0 COG0200@1|root,COG0200@2|Bacteria,2GHVD@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria J Binds to the 23S rRNA rplO - - ko:K02876 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L27A HSJS2_k127_276480_0 861299.J421_2794 1.025e-147 482.0 COG0201@1|root,COG0201@2|Bacteria,1ZSYZ@142182|Gemmatimonadetes 142182|Gemmatimonadetes U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently secY - - ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5 - - SecY HSJS2_k127_276480_1 1120936.KB907214_gene4441 1.092e-62 222.0 COG0563@1|root,COG0563@2|Bacteria,2GJ7T@201174|Actinobacteria,4EG7R@85012|Streptosporangiales 201174|Actinobacteria F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism adk - 2.7.4.3 ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 M00049 R00127,R01547,R11319 RC00002 ko00000,ko00001,ko00002,ko01000,ko04147 - - - ADK,ADK_lid HSJS2_k127_276480_3 861299.J421_2796 3.946e-46 180.0 COG0024@1|root,COG0024@2|Bacteria,1ZTC1@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Metallopeptidase family M24 map - 3.4.11.18 ko:K01265 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M24 HSJS2_k127_2771974_7 391625.PPSIR1_04513 0.0004502 50.0 COG3409@1|root,COG3409@2|Bacteria,1NB3C@1224|Proteobacteria 1224|Proteobacteria M Peptidoglycan-binding domain 1 protein - - - - - - - - - - - - - HSJS2_k127_2771974_4 1379270.AUXF01000006_gene56 1.041e-66 241.0 COG4448@1|root,COG4448@2|Bacteria,1ZTG2@142182|Gemmatimonadetes 142182|Gemmatimonadetes E L-asparaginase II - - - - - - - - - - - - Asparaginase_II HSJS2_k127_2771974_6 861299.J421_3473 9.783e-31 139.0 COG0599@1|root,COG0599@2|Bacteria,1ZTPF@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Carboxymuconolactone decarboxylase family - - 4.1.1.44 ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 - R03470 RC00938 ko00000,ko00001,ko01000 - - - CMD HSJS2_k127_2771974_0 861299.J421_3472 9.523e-122 404.0 COG0536@1|root,COG0536@2|Bacteria,1ZSVS@142182|Gemmatimonadetes 142182|Gemmatimonadetes S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control obg - - ko:K03979 - - - - ko00000,ko01000,ko03009 - - - GTP1_OBG,MMR_HSR1 HSJS2_k127_2771974_5 279714.FuraDRAFT_2797 2.326e-53 212.0 COG0758@1|root,COG0758@2|Bacteria,1MVF6@1224|Proteobacteria,2VH3W@28216|Betaproteobacteria,2KPZT@206351|Neisseriales 206351|Neisseriales LU DNA recombination-mediator protein A dprA - - ko:K04096 - - - - ko00000 - - - DNA_processg_A HSJS2_k127_2771974_3 861299.J421_3470 6.157e-92 331.0 COG0635@1|root,COG0635@2|Bacteria,1ZSSU@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Involved in the biosynthesis of porphyrin-containing compound - - - - - - - - - - - - Radical_SAM HSJS2_k127_2771974_2 379066.GAU_1899 4.459e-95 326.0 COG1420@1|root,COG1420@2|Bacteria,1ZTER@142182|Gemmatimonadetes 142182|Gemmatimonadetes K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons hrcA - - ko:K03705 - - - - ko00000,ko03000 - - - HrcA HSJS2_k127_2771974_1 861299.J421_3468 5.411e-107 356.0 COG0484@1|root,COG0484@2|Bacteria,1ZSVD@142182|Gemmatimonadetes 142182|Gemmatimonadetes O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins - - - ko:K03686 - - - - ko00000,ko03029,ko03110 - - - DnaJ,DnaJ_C,DnaJ_CXXCXGXG HSJS2_k127_2813064_0 1122611.KB904029_gene5275 1.979e-106 383.0 COG2319@1|root,COG2319@2|Bacteria,2GJN3@201174|Actinobacteria,4EG08@85012|Streptosporangiales 201174|Actinobacteria M WD40 repeats - - - - - - - - - - - - HTH_31,WD40 HSJS2_k127_281327_0 1379270.AUXF01000004_gene2955 6.741e-68 242.0 COG0860@1|root,COG0860@2|Bacteria,1ZT6J@142182|Gemmatimonadetes 142182|Gemmatimonadetes M Ami_3 - - 3.5.1.28 ko:K01448 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 - - - Amidase_3 HSJS2_k127_281327_1 1112212.JH584235_gene592 5.62e-50 185.0 COG0663@1|root,COG0663@2|Bacteria,1RD76@1224|Proteobacteria,2U5GR@28211|Alphaproteobacteria,2K4AW@204457|Sphingomonadales 204457|Sphingomonadales S COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - - - - - - - - - - Hexapep HSJS2_k127_281327_2 266117.Rxyl_2819 3.497e-11 67.0 COG2345@1|root,COG2345@2|Bacteria 2|Bacteria K Transcriptional regulator - - - - - - - - - - - - HTH_11,HTH_20,HTH_24,HTH_5,MarR_2 HSJS2_k127_2825191_4 1203605.HMPREF1531_01683 1.058e-07 56.0 COG0210@1|root,COG0210@2|Bacteria,2GISS@201174|Actinobacteria,4DP2M@85009|Propionibacteriales 201174|Actinobacteria L UvrD-like helicase C-terminal domain pcrA GO:0000018,GO:0000166,GO:0000287,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0009892,GO:0009987,GO:0010605,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0030312,GO:0030554,GO:0031323,GO:0031324,GO:0032392,GO:0032508,GO:0032552,GO:0032554,GO:0032558,GO:0032564,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0036094,GO:0040007,GO:0042623,GO:0043138,GO:0043140,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0045910,GO:0045934,GO:0046483,GO:0046872,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051276,GO:0051716,GO:0060255,GO:0060542,GO:0060543,GO:0065007,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - UvrD-helicase,UvrD_C HSJS2_k127_2825191_1 861299.J421_3181 1.498e-78 279.0 28Q1P@1|root,2ZB8E@2|Bacteria,1ZSPA@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Zinc dependent phospholipase C - - - - - - - - - - - - Zn_dep_PLPC HSJS2_k127_2825191_3 1307761.L21SP2_1995 5.223e-24 105.0 COG0347@1|root,COG0347@2|Bacteria,2J85W@203691|Spirochaetes 203691|Spirochaetes E Belongs to the P(II) protein family - - - - - - - - - - - - - HSJS2_k127_2825191_0 1245469.S58_00090 7.409e-159 513.0 COG0766@1|root,COG0766@2|Bacteria,1MUH7@1224|Proteobacteria,2TRPH@28211|Alphaproteobacteria,3JVEC@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine murA - 2.5.1.7 ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 - R00660 RC00350 ko00000,ko00001,ko01000,ko01011 - - - EPSP_synthase HSJS2_k127_2825191_2 1125863.JAFN01000001_gene3381 3.566e-28 132.0 COG1496@1|root,COG1496@2|Bacteria,1MW2H@1224|Proteobacteria,42SE9@68525|delta/epsilon subdivisions,2WMQE@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Belongs to the multicopper oxidase YfiH RL5 family - - - ko:K05810 - - - - ko00000,ko01000 - - - Cu-oxidase_4 HSJS2_k127_283540_6 401053.AciPR4_3477 1.457e-14 74.0 COG3195@1|root,COG3195@2|Bacteria,3Y7TD@57723|Acidobacteria,2JN0F@204432|Acidobacteriia 204432|Acidobacteriia S PFAM Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase - - 4.1.1.97 ko:K16840 ko00230,ko01100,ko01120,map00230,map01100,map01120 M00546 R06604 RC01551 ko00000,ko00001,ko00002,ko01000 - - - OHCU_decarbox HSJS2_k127_283540_5 28042.GU90_05015 1.215e-34 138.0 COG2351@1|root,COG2351@2|Bacteria,2IQUN@201174|Actinobacteria,4E5V4@85010|Pseudonocardiales 201174|Actinobacteria S Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily uraH - 3.5.2.17 ko:K07127 ko00230,ko01100,ko01120,map00230,map01100,map01120 M00546 R06601 RC03393 ko00000,ko00001,ko00002,ko01000,ko02000 9.B.35.1.2,9.B.35.2 - - Transthyretin HSJS2_k127_283540_1 930169.B5T_03916 5.923e-128 423.0 COG3748@1|root,COG3748@2|Bacteria,1MWHB@1224|Proteobacteria,1RRV4@1236|Gammaproteobacteria,1XIB8@135619|Oceanospirillales 135619|Oceanospirillales S membrane - - - - - - - - - - - - Urate_ox_N HSJS2_k127_283540_0 215803.DB30_1345 1.703e-154 513.0 COG2301@1|root,COG2301@2|Bacteria,1R7U2@1224|Proteobacteria,437FH@68525|delta/epsilon subdivisions,2X2N4@28221|Deltaproteobacteria,2YTXN@29|Myxococcales 28221|Deltaproteobacteria G Belongs to the HpcH HpaI aldolase family - - - - - - - - - - - - HpcH_HpaI HSJS2_k127_283540_3 502025.Hoch_5969 3.083e-46 184.0 COG1319@1|root,COG1319@2|Bacteria,1RCRH@1224|Proteobacteria,42R7J@68525|delta/epsilon subdivisions,2WMT4@28221|Deltaproteobacteria,2Z0Y2@29|Myxococcales 28221|Deltaproteobacteria C CO dehydrogenase flavoprotein C-terminal domain - - 1.17.1.4 ko:K13479 ko00230,ko01100,ko01120,map00230,map01100,map01120 M00546 R01768,R02103 RC00143 ko00000,ko00001,ko00002,ko01000 - - - CO_deh_flav_C,FAD_binding_5 HSJS2_k127_283540_4 502025.Hoch_5970 2.943e-38 158.0 COG2080@1|root,COG2080@2|Bacteria,1MWA6@1224|Proteobacteria,42RRP@68525|delta/epsilon subdivisions,2WP0I@28221|Deltaproteobacteria,2Z3A6@29|Myxococcales 28221|Deltaproteobacteria C [2Fe-2S] binding domain - - 1.2.5.3 ko:K03518,ko:K13483 ko00230,ko01100,ko01120,map00230,map01100,map01120 M00546 R01768,R02103,R11168 RC00143,RC02800 ko00000,ko00001,ko00002,ko01000 - - - Fer2,Fer2_2 HSJS2_k127_283540_2 1267534.KB906759_gene1947 4.043e-65 229.0 COG1529@1|root,COG1529@2|Bacteria,3Y6BF@57723|Acidobacteria 57723|Acidobacteria C aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - 1.2.5.3 ko:K03520 - - R11168 RC02800 ko00000,ko01000 - - - Ald_Xan_dh_C,Ald_Xan_dh_C2 HSJS2_k127_2870560_3 765420.OSCT_2368 1.852e-71 251.0 COG1028@1|root,COG1028@2|Bacteria,2G660@200795|Chloroflexi,376R3@32061|Chloroflexia 32061|Chloroflexia IQ Belongs to the short-chain dehydrogenases reductases (SDR) family - - - - - - - - - - - - adh_short HSJS2_k127_2870560_1 1122604.JONR01000034_gene430 5.675e-106 358.0 COG0513@1|root,COG0513@2|Bacteria,1MU49@1224|Proteobacteria,1RMWA@1236|Gammaproteobacteria,1X3UF@135614|Xanthomonadales 135614|Xanthomonadales JKL Belongs to the DEAD box helicase family rhlE - 3.6.4.13 ko:K11927 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - DEAD,Helicase_C HSJS2_k127_2870560_0 861299.J421_3192 2.977e-136 452.0 COG0342@1|root,COG0342@2|Bacteria,1ZTBW@142182|Gemmatimonadetes 142182|Gemmatimonadetes U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA secD - - ko:K03072 ko03060,ko03070,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 2.A.6.4,3.A.5.2,3.A.5.7 - - SecD_SecF,Sec_GG HSJS2_k127_2870560_2 765912.Thimo_1063 2.587e-73 257.0 COG0341@1|root,COG0341@2|Bacteria,1MU74@1224|Proteobacteria,1RNTY@1236|Gammaproteobacteria,1WX0P@135613|Chromatiales 135613|Chromatiales U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA secF - - ko:K03074 ko03060,ko03070,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 2.A.6.4,3.A.5.2,3.A.5.7 - - SecD_SecF,Sec_GG HSJS2_k127_2870560_4 379066.GAU_1562 3.363e-70 248.0 COG0084@1|root,COG0084@2|Bacteria,1ZST0@142182|Gemmatimonadetes 142182|Gemmatimonadetes L TatD related DNase - - - ko:K03424 - - - - ko00000,ko01000 - - - TatD_DNase HSJS2_k127_2870560_5 502025.Hoch_3217 2.219e-09 68.0 COG0323@1|root,COG0323@2|Bacteria,1MV61@1224|Proteobacteria,42MFX@68525|delta/epsilon subdivisions,2WJ91@28221|Deltaproteobacteria,2YU35@29|Myxococcales 28221|Deltaproteobacteria L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex mutL GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - ko:K03572 ko03430,map03430 - - - ko00000,ko00001,ko03400 - - - DNA_mis_repair,HATPase_c_3,MutL_C HSJS2_k127_2883952_0 502025.Hoch_1577 3.134e-164 548.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,1P64D@1224|Proteobacteria,439PY@68525|delta/epsilon subdivisions,2X51T@28221|Deltaproteobacteria,2YZZT@29|Myxococcales 28221|Deltaproteobacteria KLTU Protein kinase domain - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase HSJS2_k127_2915916_3 1485545.JQLW01000011_gene1336 3.74e-52 199.0 COG1238@1|root,COG1238@2|Bacteria,1MWED@1224|Proteobacteria 1224|Proteobacteria O membrane MA20_20865 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - - - - - - - - - - SNARE_assoc HSJS2_k127_2915916_2 861299.J421_3240 3.629e-66 243.0 COG2518@1|root,COG2518@2|Bacteria,1ZTED@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins pcm - 2.1.1.77 ko:K00573 - - - - ko00000,ko01000 - - - PCMT HSJS2_k127_2915916_1 861299.J421_3239 4.739e-92 309.0 COG0496@1|root,COG0496@2|Bacteria,1ZT6W@142182|Gemmatimonadetes 142182|Gemmatimonadetes F Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates surE - 3.1.3.5 ko:K03787 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 - R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346 RC00017 ko00000,ko00001,ko01000 - - - SurE HSJS2_k127_2915916_5 379066.GAU_1604 4.863e-32 128.0 COG0789@1|root,COG0789@2|Bacteria,1ZTSI@142182|Gemmatimonadetes 142182|Gemmatimonadetes K helix_turn_helix, mercury resistance - - - - - - - - - - - - MerR_1 HSJS2_k127_2915916_0 243231.GSU0006 9.239e-97 337.0 COG0240@1|root,COG0240@2|Bacteria,1MUU3@1224|Proteobacteria,42NQB@68525|delta/epsilon subdivisions,2WIWW@28221|Deltaproteobacteria,43TUN@69541|Desulfuromonadales 28221|Deltaproteobacteria I NAD-dependent glycerol-3-phosphate dehydrogenase domain protein gpsA - 1.1.1.94 ko:K00057 ko00564,ko01110,map00564,map01110 - R00842,R00844 RC00029 ko00000,ko00001,ko01000 - - - NAD_Gly3P_dh_C,NAD_Gly3P_dh_N HSJS2_k127_2915916_4 498761.HM1_1986 6.149e-42 164.0 COG0344@1|root,COG0344@2|Bacteria,1VA3J@1239|Firmicutes,24JA2@186801|Clostridia 186801|Clostridia I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP plsY - 2.3.1.15 ko:K08591 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R00851,R09380 RC00004,RC00039,RC00041 ko00000,ko00001,ko00002,ko01000,ko01004 - - - G3P_acyltransf HSJS2_k127_2915916_6 999415.HMPREF9943_00442 2.21e-14 74.0 COG1160@1|root,COG1160@2|Bacteria,1TPNM@1239|Firmicutes,3VNXS@526524|Erysipelotrichia 526524|Erysipelotrichia S GTPase that plays an essential role in the late steps of ribosome biogenesis der - - ko:K03977 - - - - ko00000,ko03009 - - - KH_dom-like,MMR_HSR1 HSJS2_k127_2919439_2 1380394.JADL01000001_gene3101 1.322e-80 283.0 COG0477@1|root,COG2814@2|Bacteria,1MVSH@1224|Proteobacteria,2TUEW@28211|Alphaproteobacteria,2JV5D@204441|Rhodospirillales 204441|Rhodospirillales EGP Sugar (and other) transporter - - - ko:K08151 - M00668 - - ko00000,ko00002,ko01504,ko02000 2.A.1.2.38,2.A.1.2.39,2.A.1.2.4,2.A.1.2.41,2.A.1.2.68,2.A.1.2.75 - - MFS_1 HSJS2_k127_2919439_3 1122963.AUHB01000001_gene369 4.425e-47 180.0 COG0491@1|root,COG0491@2|Bacteria,1MVC3@1224|Proteobacteria,2TUAZ@28211|Alphaproteobacteria,36Y4U@31993|Methylocystaceae 28211|Alphaproteobacteria S Metallo-beta-lactamase superfamily MA20_07390 - 3.1.2.6 ko:K01069 ko00620,map00620 - R01736 RC00004,RC00137 ko00000,ko00001,ko01000 - - - Lactamase_B HSJS2_k127_2919439_5 59538.XP_005983646.1 8.453e-35 149.0 COG0494@1|root,KOG3904@2759|Eukaryota,39R6U@33154|Opisthokonta 33154|Opisthokonta L metal ion binding - - - ko:K13355 ko04146,map04146 - - - ko00000,ko00001,ko01000 - - - NUDIX HSJS2_k127_2919439_9 42256.RradSPS_1270 2.399e-09 69.0 COG2881@1|root,COG2881@2|Bacteria 2|Bacteria M overlaps another CDS with the same product name - - - - - - - - - - - - Yip1 HSJS2_k127_2919439_0 861299.J421_1072 2.846e-135 440.0 COG0592@1|root,COG0592@2|Bacteria,1ZT22@142182|Gemmatimonadetes 142182|Gemmatimonadetes L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria - - 2.7.7.7 ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_beta,DNA_pol3_beta_3 HSJS2_k127_2919439_1 1121091.AUMP01000041_gene4251 2.839e-118 396.0 COG0593@1|root,COG0593@2|Bacteria,1TPV7@1239|Firmicutes,4H9MW@91061|Bacilli 91061|Bacilli L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids dnaA GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - ko:K02313 ko02020,ko04112,map02020,map04112 - - - ko00000,ko00001,ko03032,ko03036 - - - Bac_DnaA,Bac_DnaA_C,DnaA_N HSJS2_k127_2919439_8 684949.ATTJ01000001_gene1893 1.276e-10 64.0 COG0230@1|root,COG0230@2|Bacteria,1WKP1@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus J Belongs to the bacterial ribosomal protein bL34 family rpmH - - ko:K02914 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L34 HSJS2_k127_2919439_7 861299.J421_1069 3.319e-13 74.0 COG0594@1|root,COG0594@2|Bacteria,1ZV89@142182|Gemmatimonadetes 142182|Gemmatimonadetes J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme rnpA - 3.1.26.5 ko:K03536 - - - - ko00000,ko01000,ko03016 - - - Ribonuclease_P HSJS2_k127_2919439_6 663278.Ethha_2798 2.008e-22 99.0 COG0759@1|root,COG0759@2|Bacteria,1VEIG@1239|Firmicutes,24QN4@186801|Clostridia,3WKGN@541000|Ruminococcaceae 186801|Clostridia S Could be involved in insertion of integral membrane proteins into the membrane yidD - - ko:K08998 - - - - ko00000 - - - Haemolytic HSJS2_k127_2919439_4 1379270.AUXF01000002_gene1186 5.17e-36 151.0 COG0706@1|root,COG0706@2|Bacteria,1ZSKV@142182|Gemmatimonadetes 142182|Gemmatimonadetes U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins yidC - - ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044,ko03029 2.A.9 - - 60KD_IMP,YidC_periplas HSJS2_k127_2962403_0 861299.J421_0308 8.798e-39 151.0 COG1595@1|root,COG1595@2|Bacteria,1ZTP3@142182|Gemmatimonadetes 142182|Gemmatimonadetes K Sigma-70 region 2 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 HSJS2_k127_2962403_1 861299.J421_2115 3.057e-07 61.0 2F7PW@1|root,34048@2|Bacteria,1ZTZH@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_2978449_7 1232410.KI421421_gene3580 3.63e-32 132.0 COG1212@1|root,COG1212@2|Bacteria,1MUUU@1224|Proteobacteria,42PTX@68525|delta/epsilon subdivisions,2WMQW@28221|Deltaproteobacteria,43TY0@69541|Desulfuromonadales 28221|Deltaproteobacteria M Cytidylyltransferase kdsB - 2.7.7.38 ko:K00979 ko00540,ko01100,map00540,map01100 M00063 R03351,R11396 RC00152,RC00910 ko00000,ko00001,ko00002,ko01000,ko01005 - - - CTP_transf_3 HSJS2_k127_2978449_9 309799.DICTH_0759 3.399e-24 108.0 COG0778@1|root,COG0778@2|Bacteria 2|Bacteria C coenzyme F420-1:gamma-L-glutamate ligase activity noxC - - - - - - - - - - - Nitroreductase,TM1586_NiRdase HSJS2_k127_2978449_1 1379270.AUXF01000006_gene261 1.967e-86 305.0 COG4974@1|root,COG4974@2|Bacteria,1ZTAH@142182|Gemmatimonadetes 142182|Gemmatimonadetes D Phage integrase, N-terminal SAM-like domain xerD - - ko:K04763 - - - - ko00000,ko03036 - - - Phage_int_SAM_1,Phage_integrase HSJS2_k127_2978449_10 861299.J421_3263 1.923e-22 105.0 COG0586@1|root,COG0586@2|Bacteria,1ZTVI@142182|Gemmatimonadetes 142182|Gemmatimonadetes S SNARE associated Golgi protein - - - - - - - - - - - - SNARE_assoc HSJS2_k127_2978449_3 379066.GAU_1631 2.929e-52 188.0 COG0245@1|root,COG0245@2|Bacteria,1ZTM5@142182|Gemmatimonadetes 142182|Gemmatimonadetes F Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) ispF - 4.6.1.12 ko:K01770 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05637 RC00002,RC01440 ko00000,ko00001,ko00002,ko01000 - - - YgbB HSJS2_k127_2978449_6 572547.Amico_1171 6.458e-35 150.0 COG0041@1|root,COG0041@2|Bacteria,3TB8R@508458|Synergistetes 508458|Synergistetes F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) purE - 5.4.99.18 ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R07405 RC01947 ko00000,ko00001,ko00002,ko01000 - - - AIRC HSJS2_k127_2978449_0 1121468.AUBR01000030_gene1226 3.72e-152 492.0 COG0304@1|root,COG0304@2|Bacteria,1TPA7@1239|Firmicutes,247VF@186801|Clostridia,42FCV@68295|Thermoanaerobacterales 186801|Clostridia I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP fabF - 2.3.1.179 ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119 RC00039,RC02728,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Ketoacyl-synt_C,ketoacyl-synt HSJS2_k127_2978449_8 1112214.AHIS01000092_gene473 1.322e-24 105.0 COG0236@1|root,COG0236@2|Bacteria,1MZ4P@1224|Proteobacteria,2UBWW@28211|Alphaproteobacteria,2K5X6@204457|Sphingomonadales 204457|Sphingomonadales IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis acpP - - ko:K02078 - - - - ko00000,ko00001 - - - PP-binding HSJS2_k127_2978449_2 861299.J421_3270 4.845e-82 284.0 COG1028@1|root,COG1028@2|Bacteria,1ZT4H@142182|Gemmatimonadetes 142182|Gemmatimonadetes IQ KR domain - - 1.1.1.100 ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short_C2 HSJS2_k127_2978449_4 861299.J421_3271 2.224e-49 182.0 COG0331@1|root,COG0331@2|Bacteria,1ZT40@142182|Gemmatimonadetes 142182|Gemmatimonadetes I Acyl transferase domain - - 2.3.1.39 ko:K00645 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 M00082 R01626,R11671 RC00004,RC00039,RC02727 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Acyl_transf_1 HSJS2_k127_3001630_5 666685.R2APBS1_3798 1.009e-17 87.0 COG2128@1|root,COG2128@2|Bacteria,1MUDM@1224|Proteobacteria,1RZGS@1236|Gammaproteobacteria,1XBRV@135614|Xanthomonadales 135614|Xanthomonadales S Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - - - - - - - - - - CMD HSJS2_k127_3001630_6 1231392.OCGS_1734 3.452e-14 75.0 COG2128@1|root,COG2128@2|Bacteria,1MUDM@1224|Proteobacteria,2TTY5@28211|Alphaproteobacteria 28211|Alphaproteobacteria I Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - - - - - - - - - - CMD HSJS2_k127_3001630_1 1128421.JAGA01000001_gene2365 5.109e-77 280.0 COG1600@1|root,COG1600@2|Bacteria,2NNWV@2323|unclassified Bacteria 2|Bacteria C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) queG GO:0003674,GO:0003824,GO:0006091,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009055,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0022900,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 ko:K18979 - - - - ko00000,ko01000,ko03016 - - - DUF1730,Fer4_16 HSJS2_k127_3001630_0 118163.Ple7327_1962 5.854e-79 269.0 COG0177@1|root,COG0177@2|Bacteria,1G1VI@1117|Cyanobacteria,3VI7V@52604|Pleurocapsales 1117|Cyanobacteria L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate nth - 4.2.99.18 ko:K10773 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - EndIII_4Fe-2S,HhH-GPD HSJS2_k127_3001630_2 211165.AJLN01000081_gene995 5.65e-64 233.0 COG0517@1|root,COG1994@1|root,COG0517@2|Bacteria,COG1994@2|Bacteria,1GIVV@1117|Cyanobacteria,1JJ9F@1189|Stigonemataceae 1117|Cyanobacteria S Peptidase family M50 - - - - - - - - - - - - CBS,Peptidase_M50 HSJS2_k127_3001630_4 391600.ABRU01000056_gene494 3.78e-27 119.0 COG1853@1|root,COG1853@2|Bacteria,1RGYM@1224|Proteobacteria,2UCHI@28211|Alphaproteobacteria,2KH3X@204458|Caulobacterales 204458|Caulobacterales S PFAM flavin reductase domain protein FMN-binding - - - - - - - - - - - - Flavin_Reduct HSJS2_k127_3001630_3 1191523.MROS_1735 2.598e-41 157.0 COG0733@1|root,COG0733@2|Bacteria 2|Bacteria S neurotransmitter:sodium symporter activity CP_0468 - - ko:K03308,ko:K03466 - - - - ko00000,ko03036 2.A.22.4,2.A.22.5,3.A.12 - - SNF HSJS2_k127_3008726_0 1121438.JNJA01000022_gene430 2.558e-34 145.0 COG4961@1|root,COG4961@2|Bacteria,1NIG7@1224|Proteobacteria,42X7K@68525|delta/epsilon subdivisions,2WSKV@28221|Deltaproteobacteria,2M9N1@213115|Desulfovibrionales 28221|Deltaproteobacteria U Putative Flp pilus-assembly TadE/G-like - - - - - - - - - - - - Tad HSJS2_k127_3008726_1 555079.Toce_0874 7.268e-12 72.0 COG1595@1|root,COG1595@2|Bacteria,1VANG@1239|Firmicutes,24APW@186801|Clostridia,42GEI@68295|Thermoanaerobacterales 186801|Clostridia K RNA polymerase sigma factor - - - - - - - - - - - - Sigma70_r2,Sigma70_r4_2 HSJS2_k127_3008726_2 1894.JOER01000017_gene4698 4.044e-05 54.0 COG5662@1|root,COG5662@2|Bacteria 2|Bacteria K AntiSigma factor - - - - - - - - - - - - RskA,zf-HC2 HSJS2_k127_3012891_2 485915.Dret_0105 1.026e-17 90.0 COG1846@1|root,COG1846@2|Bacteria,1N75F@1224|Proteobacteria,42VDI@68525|delta/epsilon subdivisions,2WR80@28221|Deltaproteobacteria,2MBUI@213115|Desulfovibrionales 28221|Deltaproteobacteria K Transcriptional regulator, marR - - - - - - - - - - - - MarR HSJS2_k127_3012891_0 861299.J421_4378 3.895e-50 189.0 COG3595@1|root,COG3595@2|Bacteria,1ZTQ0@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - DUF4097 HSJS2_k127_3012891_1 1500893.JQNB01000001_gene1615 3.816e-26 119.0 COG3595@1|root,COG3595@2|Bacteria,1P19T@1224|Proteobacteria,1RRSR@1236|Gammaproteobacteria,1X62K@135614|Xanthomonadales 135614|Xanthomonadales S Putative adhesin - - - - - - - - - - - - DUF4097 HSJS2_k127_3048246_0 861299.J421_1760 1.026e-59 227.0 COG0515@1|root,COG0515@2|Bacteria,1ZUFG@142182|Gemmatimonadetes 142182|Gemmatimonadetes KLT Protein kinase domain - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase HSJS2_k127_3084691_1 1123256.KB907926_gene752 1.811e-06 60.0 COG4775@1|root,COG4775@2|Bacteria,1QUE3@1224|Proteobacteria,1T1VJ@1236|Gammaproteobacteria 1236|Gammaproteobacteria M Psort location OuterMembrane, score - - - - - - - - - - - - Bac_surface_Ag HSJS2_k127_3090093_1 861299.J421_4119 1.935e-174 556.0 COG0534@1|root,COG0534@2|Bacteria,1ZT8D@142182|Gemmatimonadetes 142182|Gemmatimonadetes V MatE - - - - - - - - - - - - MatE HSJS2_k127_3090093_8 379066.GAU_0167 1.943e-21 105.0 COG2924@1|root,COG2924@2|Bacteria,1ZTWZ@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - - - - - - - - - - Iron_traffic HSJS2_k127_3090093_9 1121004.ATVC01000020_gene18 1.779e-06 61.0 COG0589@1|root,COG0589@2|Bacteria,1PE08@1224|Proteobacteria,2VNHV@28216|Betaproteobacteria,2KSZN@206351|Neisseriales 206351|Neisseriales T Universal stress protein family - - - - - - - - - - - - Usp HSJS2_k127_3090093_3 379066.GAU_0738 6.091e-77 272.0 COG4324@1|root,COG4324@2|Bacteria,1ZT8G@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Putative aminopeptidase - - - - - - - - - - - - Aminopep HSJS2_k127_3090093_4 861299.J421_2641 9.525e-55 217.0 COG1519@1|root,COG1519@2|Bacteria,1ZSXB@142182|Gemmatimonadetes 142182|Gemmatimonadetes M 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) - - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 ko:K02527 ko00540,ko01100,map00540,map01100 M00060,M00080 R04658,R05074,R09763 RC00009,RC00077,RC00247 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT30 - Glycos_transf_N HSJS2_k127_3090093_6 441620.Mpop_3615 2.121e-38 162.0 COG1680@1|root,COG1680@2|Bacteria,1MVPR@1224|Proteobacteria,2U5VQ@28211|Alphaproteobacteria,1JT3V@119045|Methylobacteriaceae 28211|Alphaproteobacteria V Beta-lactamase - - - - - - - - - - - - Beta-lactamase,DUF3471 HSJS2_k127_3090093_5 309807.SRU_1984 2.864e-54 199.0 2CHNQ@1|root,2Z7KM@2|Bacteria,4NHAA@976|Bacteroidetes,1FK2S@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes - - - - - - - - - - - - - - - HSJS2_k127_3090093_7 469383.Cwoe_3337 1.035e-32 137.0 COG1802@1|root,COG1802@2|Bacteria,2IS8U@201174|Actinobacteria 201174|Actinobacteria K FCD domain - - - - - - - - - - - - FCD,GntR HSJS2_k127_3090093_0 1382359.JIAL01000001_gene699 2.067e-189 616.0 COG1132@1|root,COG1132@2|Bacteria,3Y2ZR@57723|Acidobacteria,2JHJA@204432|Acidobacteriia 204432|Acidobacteriia V ABC transporter, transmembrane - - - ko:K18890 ko02010,map02010 M00707 - - ko00000,ko00001,ko00002,ko02000 3.A.1.106.13,3.A.1.106.5 - - ABC_membrane,ABC_tran HSJS2_k127_3090093_2 1379270.AUXF01000003_gene3672 8.209e-122 403.0 COG0178@1|root,COG0178@2|Bacteria,1ZT1W@142182|Gemmatimonadetes 142182|Gemmatimonadetes L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate - - - ko:K03701 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - ABC_tran HSJS2_k127_3093421_0 443143.GM18_0031 2.146e-72 254.0 COG3276@1|root,COG3276@2|Bacteria,1MWXH@1224|Proteobacteria,42M49@68525|delta/epsilon subdivisions,2WJ5G@28221|Deltaproteobacteria,43TPN@69541|Desulfuromonadales 28221|Deltaproteobacteria J Elongation factor SelB winged helix 3 selB - - ko:K03833 - - - - ko00000,ko03012 - - - GTP_EFTU,GTP_EFTU_D2,SelB-wing_2,SelB-wing_3 HSJS2_k127_3093421_1 861299.J421_3135 1.27e-41 163.0 COG1381@1|root,COG1381@2|Bacteria,1ZTHP@142182|Gemmatimonadetes 142182|Gemmatimonadetes L Involved in DNA repair and RecF pathway recombination recO - - ko:K03584 ko03440,map03440 - - - ko00000,ko00001,ko03400 - - - RecO_C,RecO_N HSJS2_k127_3093421_2 470145.BACCOP_03596 1.578e-05 52.0 COG4206@1|root,COG4206@2|Bacteria,4NED9@976|Bacteroidetes,2FNSZ@200643|Bacteroidia,4AMUF@815|Bacteroidaceae 976|Bacteroidetes H COG4206 Outer membrane cobalamin receptor protein - - - - - - - - - - - - Plug,TonB_dep_Rec HSJS2_k127_3114017_1 861299.J421_2819 2.621e-55 203.0 COG0123@1|root,COG0123@2|Bacteria,1ZSKN@142182|Gemmatimonadetes 142182|Gemmatimonadetes BQ Histone deacetylase domain - - - - - - - - - - - - Hist_deacetyl HSJS2_k127_3114017_2 861299.J421_3777 3.99e-50 198.0 COG0631@1|root,COG0631@2|Bacteria,1ZSYG@142182|Gemmatimonadetes 142182|Gemmatimonadetes T Serine/threonine phosphatases, family 2C, catalytic domain - - 3.1.3.16 ko:K20074 - - - - ko00000,ko01000,ko01009 - - - PP2C_2 HSJS2_k127_3114017_0 861299.J421_3775 2.505e-115 387.0 COG1078@1|root,COG1078@2|Bacteria,1ZT3F@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Metal dependent phosphohydrolases with conserved 'HD' motif. - - - ko:K06885 - - - - ko00000 - - - HD HSJS2_k127_3114017_4 118163.Ple7327_4428 1.041e-23 109.0 2BG65@1|root,32A2Y@2|Bacteria,1G6VZ@1117|Cyanobacteria,3VJZ3@52604|Pleurocapsales 1117|Cyanobacteria - - - - - - - - - - - - - - - HSJS2_k127_3114017_3 1379270.AUXF01000002_gene1621 4.279e-48 196.0 2EWAK@1|root,33PPB@2|Bacteria,1ZT00@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_3118757_4 861299.J421_0442 9.536e-33 133.0 COG1595@1|root,COG1595@2|Bacteria,1ZTNW@142182|Gemmatimonadetes 142182|Gemmatimonadetes K Sigma-70 region 2 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 HSJS2_k127_3118757_2 1089553.Tph_c04150 1.056e-43 169.0 COG0127@1|root,COG0127@2|Bacteria,1V6RN@1239|Firmicutes,249GK@186801|Clostridia,42GAD@68295|Thermoanaerobacterales 186801|Clostridia F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions rdgB - 3.6.1.66 ko:K02428 ko00230,map00230 - R00426,R00720,R01855,R02100,R02720,R03531 RC00002 ko00000,ko00001,ko01000 - - - Ham1p_like HSJS2_k127_3118757_1 1267535.KB906767_gene1277 7.216e-66 241.0 COG0109@1|root,COG0109@2|Bacteria,3Y3VI@57723|Acidobacteria,2JIRB@204432|Acidobacteriia 204432|Acidobacteriia O Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group ctaB - 2.5.1.141 ko:K02257 ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714 M00154 R07411 RC01786 ko00000,ko00001,ko00002,ko01000,ko01006,ko03029 - - - UbiA HSJS2_k127_3118757_3 765912.Thimo_0517 6.931e-42 174.0 COG0615@1|root,COG2870@1|root,COG0615@2|Bacteria,COG2870@2|Bacteria,1MV3Z@1224|Proteobacteria,1RMAJ@1236|Gammaproteobacteria,1WWQB@135613|Chromatiales 135613|Chromatiales H Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose hldE - 2.7.1.167,2.7.7.70 ko:K03272 ko00540,ko01100,map00540,map01100 M00064 R05644,R05646 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko01005 - - - CTP_transf_like,PfkB HSJS2_k127_3118757_0 251221.35211075 4.065e-89 314.0 COG0475@1|root,COG0475@2|Bacteria,1G03Z@1117|Cyanobacteria 1117|Cyanobacteria P PFAM Sodium hydrogen exchanger family kefB - - - - - - - - - - - Na_H_Exchanger HSJS2_k127_3119078_5 335543.Sfum_0899 1.405e-56 204.0 COG0490@1|root,COG0569@1|root,COG1226@1|root,COG0490@2|Bacteria,COG0569@2|Bacteria,COG1226@2|Bacteria,1R4J8@1224|Proteobacteria,42NKU@68525|delta/epsilon subdivisions,2WIRH@28221|Deltaproteobacteria,2MRD0@213462|Syntrophobacterales 28221|Deltaproteobacteria P Ion channel - - - - - - - - - - - - Ion_trans_2,TrkA_C,TrkA_N HSJS2_k127_3119078_2 335543.Sfum_0899 2.473e-113 375.0 COG0490@1|root,COG0569@1|root,COG1226@1|root,COG0490@2|Bacteria,COG0569@2|Bacteria,COG1226@2|Bacteria,1R4J8@1224|Proteobacteria,42NKU@68525|delta/epsilon subdivisions,2WIRH@28221|Deltaproteobacteria,2MRD0@213462|Syntrophobacterales 28221|Deltaproteobacteria P Ion channel - - - - - - - - - - - - Ion_trans_2,TrkA_C,TrkA_N HSJS2_k127_3119078_7 1307761.L21SP2_2143 2.872e-17 89.0 COG1278@1|root,COG1278@2|Bacteria 2|Bacteria K Cold shock - - - ko:K03704 - - - - ko00000,ko03000 - - - CSD HSJS2_k127_3119078_1 861299.J421_2871 1.223e-128 429.0 COG0469@1|root,COG0469@2|Bacteria,1ZSMD@142182|Gemmatimonadetes 142182|Gemmatimonadetes G Pyruvate kinase, barrel domain - - 2.7.1.40 ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 M00001,M00002,M00049,M00050 R00200,R00430,R01138,R01858,R02320 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 - - - PK,PK_C HSJS2_k127_3119078_4 861299.J421_2872 1.846e-73 273.0 COG1235@1|root,COG1235@2|Bacteria,1ZT49@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Metallo-beta-lactamase superfamily - - 3.1.4.55 ko:K06167 ko00440,map00440 - R10205 RC00296 ko00000,ko00001,ko01000 - - - Lactamase_B_2 HSJS2_k127_3119078_0 379066.GAU_2152 3.13e-265 844.0 COG0481@1|root,COG0481@2|Bacteria,1ZTGT@142182|Gemmatimonadetes 142182|Gemmatimonadetes M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner lepA - - ko:K03596 ko05134,map05134 - - - ko00000,ko00001 - - - EFG_C,GTP_EFTU,LepA_C HSJS2_k127_3119078_6 438753.AZC_2251 9.723e-35 146.0 COG0859@1|root,COG0859@2|Bacteria,1MXA2@1224|Proteobacteria,2TSXD@28211|Alphaproteobacteria,3F0VS@335928|Xanthobacteraceae 28211|Alphaproteobacteria M Glycosyltransferase family 9 (heptosyltransferase) waaF - - ko:K02843 ko00540,ko01100,map00540,map01100 M00080 - - ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT9 - Glyco_transf_9 HSJS2_k127_3119078_3 861299.J421_3753 4.05e-90 319.0 COG1940@1|root,COG1940@2|Bacteria,1ZT66@142182|Gemmatimonadetes 142182|Gemmatimonadetes GK ROK family - - 2.7.1.2 ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - ROK HSJS2_k127_3122623_0 1125863.JAFN01000001_gene929 2.696e-188 609.0 COG0272@1|root,COG0272@2|Bacteria,1MV3R@1224|Proteobacteria,42MC5@68525|delta/epsilon subdivisions,2WIT5@28221|Deltaproteobacteria 28221|Deltaproteobacteria L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA ligA GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 - R00382 RC00005 ko00000,ko00001,ko01000,ko03032,ko03400 - - - BRCT,DNA_ligase_OB,DNA_ligase_ZBD,DNA_ligase_aden,HHH_2,HHH_5 HSJS2_k127_3126922_8 1121943.KB900010_gene2731 1.434e-05 48.0 COG3391@1|root,COG5126@1|root,COG3391@2|Bacteria,COG5126@2|Bacteria,1RGAJ@1224|Proteobacteria,1S2QK@1236|Gammaproteobacteria,1XPCZ@135619|Oceanospirillales 135619|Oceanospirillales DTZ Ca2 -binding protein (EF-Hand superfamily - - - - - - - - - - - - - HSJS2_k127_3126922_5 458817.Shal_0867 6.844e-67 244.0 COG0665@1|root,COG0665@2|Bacteria,1MVIZ@1224|Proteobacteria,1RQ50@1236|Gammaproteobacteria,2QBFH@267890|Shewanellaceae 1236|Gammaproteobacteria E FAD dependent oxidoreductase - - 1.4.5.1 ko:K00285 ko00360,map00360 - R01374,R09493 RC00006,RC00025 ko00000,ko00001,ko01000 - - - DAO HSJS2_k127_3126922_0 880073.Calab_0297 8.794e-153 500.0 COG0006@1|root,COG0006@2|Bacteria,2NP8P@2323|unclassified Bacteria 2|Bacteria E Metallopeptidase family M24 pepQ GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009056,GO:0009987,GO:0016787,GO:0016805,GO:0019538,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0070573,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.11.9,3.4.13.9 ko:K01262,ko:K01271 - - - - ko00000,ko01000,ko01002 - - - AMP_N,Peptidase_M24 HSJS2_k127_3126922_6 743719.PaelaDRAFT_2762 1.153e-63 237.0 COG0491@1|root,COG0607@1|root,COG0491@2|Bacteria,COG0607@2|Bacteria,1TPE2@1239|Firmicutes,4H9WH@91061|Bacilli,26QN7@186822|Paenibacillaceae 91061|Bacilli P Rhodanese Homology Domain yrkH - - - - - - - - - - - Lactamase_B,Rhodanese HSJS2_k127_3126922_1 379066.GAU_3550 4.374e-132 438.0 COG0591@1|root,COG0591@2|Bacteria 2|Bacteria E symporter activity - - - ko:K03307 - - - - ko00000 2.A.21 - - SSF HSJS2_k127_3126922_3 118161.KB235922_gene2453 3.663e-102 344.0 COG3191@1|root,COG3191@2|Bacteria 2|Bacteria EQ aminopeptidase activity - - - - - - - - - - - - Peptidase_S58 HSJS2_k127_3126922_2 1192034.CAP_8700 4.724e-105 351.0 COG2876@1|root,COG2876@2|Bacteria,1QVAD@1224|Proteobacteria,42MU4@68525|delta/epsilon subdivisions,2WJ8Y@28221|Deltaproteobacteria,2YXNS@29|Myxococcales 28221|Deltaproteobacteria E phospho-2-dehydro-3-deoxyheptonate aldolase aroG-2 - 2.5.1.54,5.4.99.5 ko:K01626,ko:K03856,ko:K04516,ko:K13853 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 M00022,M00024,M00025 R01715,R01826 RC00435,RC03116 ko00000,ko00001,ko00002,ko01000 - - - CM_2,DAHP_synth_1 HSJS2_k127_3126922_7 502025.Hoch_5716 1.94e-56 214.0 COG1169@1|root,COG1169@2|Bacteria,1MVB7@1224|Proteobacteria,42S21@68525|delta/epsilon subdivisions,2WNRS@28221|Deltaproteobacteria,2YV7S@29|Myxococcales 28221|Deltaproteobacteria HQ chorismate binding enzyme menF - 5.4.4.2 ko:K01851,ko:K02361,ko:K02552 ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130 M00116 R01717 RC00588 ko00000,ko00001,ko00002,ko01000 - - - Chorismate_bind HSJS2_k127_3126922_4 1192034.CAP_8697 5.5e-67 257.0 COG1165@1|root,COG1165@2|Bacteria,1MVMZ@1224|Proteobacteria,42PNC@68525|delta/epsilon subdivisions,2WKSZ@28221|Deltaproteobacteria,2YUJF@29|Myxococcales 28221|Deltaproteobacteria H Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) menD - 2.2.1.9 ko:K02551 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R08165 RC02186 ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C,TPP_enzyme_M_2,TPP_enzyme_N HSJS2_k127_3127376_1 1297742.A176_03689 1.232e-30 133.0 COG2378@1|root,COG2378@2|Bacteria,1P2ZE@1224|Proteobacteria,42QIS@68525|delta/epsilon subdivisions,2WMK0@28221|Deltaproteobacteria,2YV96@29|Myxococcales 28221|Deltaproteobacteria K WYL domain - - - ko:K13573 - - - - ko00000,ko03051 - - - HTH_11,WYL HSJS2_k127_3127376_0 1379270.AUXF01000007_gene1064 5.855e-47 183.0 COG2378@1|root,COG2378@2|Bacteria 2|Bacteria K regulation of single-species biofilm formation - - - ko:K13572,ko:K13573 - - - - ko00000,ko03051 - - - WYL HSJS2_k127_3136228_1 907348.TresaDRAFT_2366 1.288e-101 339.0 COG0190@1|root,COG0190@2|Bacteria,2J5PR@203691|Spirochaetes 203691|Spirochaetes F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate folD - 1.5.1.5,3.5.4.9 ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R01220,R01655 RC00202,RC00578 ko00000,ko00001,ko00002,ko01000 - - - THF_DHG_CYH,THF_DHG_CYH_C HSJS2_k127_3136228_0 861299.J421_3441 4.918e-164 531.0 COG1418@1|root,COG1418@2|Bacteria,1ZT0I@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Endoribonuclease that initiates mRNA decay rny - - ko:K18682 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - DUF3552,HD,KH_1 HSJS2_k127_3136228_2 1379270.AUXF01000006_gene88 3.289e-14 79.0 COG3027@1|root,COG3027@2|Bacteria,1ZU4G@142182|Gemmatimonadetes 142182|Gemmatimonadetes D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division - - - ko:K09888 - - - - ko00000,ko03036 - - - ZapA HSJS2_k127_3136228_3 1458462.JNLK01000001_gene159 8.67e-13 70.0 COG0072@1|root,COG0072@2|Bacteria,1TP98@1239|Firmicutes,248BJ@186801|Clostridia,27IS8@186928|unclassified Lachnospiraceae 186801|Clostridia J Ferredoxin-fold anticodon binding domain pheT GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 ko:K01890 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - B3_4,B5,FDX-ACB,tRNA-synt_2d,tRNA_bind HSJS2_k127_3137190_0 1125863.JAFN01000001_gene2410 1.178e-158 514.0 COG1009@1|root,COG1009@2|Bacteria,1MW2M@1224|Proteobacteria,42KZE@68525|delta/epsilon subdivisions,2WIPT@28221|Deltaproteobacteria 28221|Deltaproteobacteria CP NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein nuoL-1 - 1.6.5.3 ko:K00341 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Proton_antipo_C,Proton_antipo_M,Proton_antipo_N HSJS2_k127_3137190_4 945713.IALB_1870 1.96e-25 110.0 COG0713@1|root,COG0713@2|Bacteria 2|Bacteria C ATP synthesis coupled electron transport nuoK GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 ko:K00340,ko:K05576 ko00190,ko01100,map00190,map01100 M00144,M00145 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q2 HSJS2_k127_3137190_3 1379270.AUXF01000006_gene238 3.208e-28 126.0 COG0839@1|root,COG0839@2|Bacteria,1ZTSA@142182|Gemmatimonadetes 142182|Gemmatimonadetes C NADH-ubiquinone/plastoquinone oxidoreductase chain 6 - - 1.6.5.3 ko:K00339 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q3 HSJS2_k127_3137190_2 1379270.AUXF01000006_gene237 5.648e-76 259.0 COG1143@1|root,COG1143@2|Bacteria,1ZTHB@142182|Gemmatimonadetes 142182|Gemmatimonadetes C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient - - 1.6.5.3 ko:K00338 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Fer4_7 HSJS2_k127_3137190_1 861299.J421_3288 1.672e-96 324.0 COG1005@1|root,COG1005@2|Bacteria,1ZTDY@142182|Gemmatimonadetes 142182|Gemmatimonadetes C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone - - 1.6.5.3 ko:K00337 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - NADHdh HSJS2_k127_3138068_1 945713.IALB_0608 8.841e-103 357.0 COG3591@1|root,COG3591@2|Bacteria 2|Bacteria E Belongs to the peptidase S1B family - - - - - - - - - - - - Peptidase_S46 HSJS2_k127_3138068_0 713586.KB900536_gene651 0.0 1028.0 COG1048@1|root,COG1048@2|Bacteria,1MU9T@1224|Proteobacteria,1RN5I@1236|Gammaproteobacteria,1WW6D@135613|Chromatiales 135613|Chromatiales C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate - - 4.2.1.3 ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00173,M00740 R01324,R01325,R01900 RC00497,RC00498,RC00618 br01601,ko00000,ko00001,ko00002,ko01000 - - - Aconitase,Aconitase_C HSJS2_k127_3139159_1 483219.LILAB_19040 7.09e-18 91.0 COG2761@1|root,COG2761@2|Bacteria,1NXUB@1224|Proteobacteria,42TBH@68525|delta/epsilon subdivisions,2WPJ5@28221|Deltaproteobacteria 28221|Deltaproteobacteria Q DsbA oxidoreductase - - - - - - - - - - - - DSBA HSJS2_k127_3139159_3 748658.KB907312_gene1931 8.541e-07 61.0 COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,1RM8A@1236|Gammaproteobacteria,1WVV9@135613|Chromatiales 135613|Chromatiales T Diguanylate cyclase - - - - - - - - - - - - CHASE,EAL,GGDEF,PAS,PAS_3,PAS_4,PAS_9,Response_reg,SBP_bac_3 HSJS2_k127_3139159_0 379066.GAU_2695 4.308e-103 343.0 COG1234@1|root,COG1234@2|Bacteria,1ZTG7@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA rnz - 3.1.26.11 ko:K00784 ko03013,map03013 - - - ko00000,ko00001,ko01000,ko03016 - - - Lactamase_B_2 HSJS2_k127_3139159_2 861299.J421_3422 3.812e-10 72.0 COG0128@1|root,COG0128@2|Bacteria 2|Bacteria E 3-phosphoshikimate 1-carboxyvinyltransferase activity aroA GO:0003674,GO:0003824,GO:0003866,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0071704,GO:0071944,GO:1901576 2.5.1.19 ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R03460 RC00350 ko00000,ko00001,ko00002,ko01000 - - iEC042_1314.EC042_0998,iECNA114_1301.ECNA114_0940,iECSF_1327.ECSF_0829,iPC815.YPO1390 EPSP_synthase HSJS2_k127_3142144_5 136993.KB900626_gene2703 6.733e-13 75.0 COG1357@1|root,COG1357@2|Bacteria,1N7U9@1224|Proteobacteria,2U0C2@28211|Alphaproteobacteria,36Z6Z@31993|Methylocystaceae 28211|Alphaproteobacteria S Pentapeptide repeats (8 copies) - - - - - - - - - - - - Pentapeptide HSJS2_k127_3142144_1 861299.J421_1883 1.055e-54 207.0 COG1595@1|root,COG1595@2|Bacteria,1ZV3I@142182|Gemmatimonadetes 2|Bacteria K Sigma-70, region 4 sigH GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016987,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0043254,GO:0044087,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 HSJS2_k127_3142144_6 1463821.JOGR01000007_gene375 1.273e-10 73.0 COG0607@1|root,COG0607@2|Bacteria,2IN5N@201174|Actinobacteria,4EZX0@85014|Glycomycetales 201174|Actinobacteria P Rhodanese Homology Domain - - - - - - - - - - - - Rhodanese HSJS2_k127_3142144_2 391937.NA2_15112 1.603e-49 183.0 COG3652@1|root,COG3652@2|Bacteria,1RDPI@1224|Proteobacteria,2TUSW@28211|Alphaproteobacteria,43KTZ@69277|Phyllobacteriaceae 28211|Alphaproteobacteria S Domain of unknown function (DUF4142) MA20_42090 - - ko:K08995 - - - - ko00000 - - - DUF4142 HSJS2_k127_3142144_3 1333998.M2A_2748 3.738e-15 83.0 COG3794@1|root,COG3794@2|Bacteria,1RI9G@1224|Proteobacteria,2U7KA@28211|Alphaproteobacteria 28211|Alphaproteobacteria C PFAM blue (type 1) copper domain protein - - - - - - - - - - - - Copper-bind,Cupredoxin_1 HSJS2_k127_3142144_0 1121904.ARBP01000004_gene799 6.791e-148 478.0 COG3211@1|root,COG3211@2|Bacteria,4NKFU@976|Bacteroidetes,47P4I@768503|Cytophagia 976|Bacteroidetes S Bacterial protein of unknown function (DUF839) - - - ko:K07093 - - - - ko00000 - - - DUF839 HSJS2_k127_3167547_6 379066.GAU_1929 1.152e-55 212.0 COG0760@1|root,COG0760@2|Bacteria,1ZTD1@142182|Gemmatimonadetes 142182|Gemmatimonadetes O SurA N-terminal domain - - 5.2.1.8 ko:K03770 - - - - ko00000,ko01000,ko03110 - - - Rotamase_2,SurA_N_2 HSJS2_k127_3167547_11 1379698.RBG1_1C00001G1748 1.767e-09 70.0 COG0457@1|root,COG0457@2|Bacteria,2NS1B@2323|unclassified Bacteria 2|Bacteria M Tetratricopeptide repeat - - - - - - - - - - - - - HSJS2_k127_3167547_8 251229.Chro_3074 1.073e-39 166.0 COG0757@1|root,COG0757@2|Bacteria,1G5X4@1117|Cyanobacteria,3VJSZ@52604|Pleurocapsales 1117|Cyanobacteria E Catalyzes a trans-dehydration via an enolate intermediate aroQ - 4.2.1.10 ko:K03786 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R03084 RC00848 ko00000,ko00001,ko00002,ko01000 - - - DHquinase_II HSJS2_k127_3167547_3 379066.GAU_1926 4.995e-79 287.0 COG0006@1|root,COG0006@2|Bacteria,1ZSTY@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Creatinase/Prolidase N-terminal domain - - 3.4.11.9 ko:K01262 - - - - ko00000,ko01000,ko01002 - - - Creatinase_N,Peptidase_M24 HSJS2_k127_3167547_4 518766.Rmar_0673 5.05e-58 207.0 COG0231@1|root,COG0231@2|Bacteria,4NDXA@976|Bacteroidetes,1FJ6E@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase efp GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - ko:K02356 - - - - ko00000,ko03012 - - - EFP,EFP_N,Elong-fact-P_C HSJS2_k127_3167547_9 1379270.AUXF01000006_gene34 7.562e-33 140.0 COG0511@1|root,COG0511@2|Bacteria,1ZTR1@142182|Gemmatimonadetes 142182|Gemmatimonadetes I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA - - - ko:K02160 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742 RC00040,RC00367 ko00000,ko00001,ko00002 - - - Biotin_lipoyl HSJS2_k127_3167547_0 1379270.AUXF01000006_gene36 2.897e-203 649.0 COG0439@1|root,COG0439@2|Bacteria,1ZT0Q@142182|Gemmatimonadetes 142182|Gemmatimonadetes I Biotin carboxylase C-terminal domain - - 6.3.4.14,6.4.1.2 ko:K01961 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04385 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 - - - Biotin_carb_C,Biotin_carb_N,CPSase_L_D2 HSJS2_k127_3167547_1 1379270.AUXF01000006_gene38 9.811e-191 631.0 COG1674@1|root,COG1674@2|Bacteria,1ZSPI@142182|Gemmatimonadetes 142182|Gemmatimonadetes D Ftsk_gamma - - - ko:K03466 - - - - ko00000,ko03036 3.A.12 - - FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma HSJS2_k127_3167547_10 1379270.AUXF01000005_gene501 7.926e-22 105.0 COG2834@1|root,COG2834@2|Bacteria,1ZTXG@142182|Gemmatimonadetes 142182|Gemmatimonadetes M Outer membrane lipoprotein carrier protein LolA - - - ko:K03634 - - - - ko00000 - - - LolA HSJS2_k127_3167547_2 379066.GAU_1174 5.597e-146 481.0 COG0621@1|root,COG0621@2|Bacteria,1ZT70@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 rimO - 2.8.4.4 ko:K14441 - - R10652 RC00003,RC03217 ko00000,ko01000,ko03009 - - - Radical_SAM,UPF0004 HSJS2_k127_3167547_5 861299.J421_2928 1.165e-56 219.0 COG2385@1|root,COG2385@2|Bacteria,1ZT25@142182|Gemmatimonadetes 142182|Gemmatimonadetes D Stage II sporulation protein - - - ko:K06381 - - - - ko00000 - - - SpoIID HSJS2_k127_3167547_7 861299.J421_2930 3.215e-55 203.0 COG0673@1|root,COG0673@2|Bacteria,1ZSV9@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Homoserine dehydrogenase, NAD binding domain - - - - - - - - - - - - GFO_IDH_MocA HSJS2_k127_3168318_1 1122179.KB890436_gene1328 0.0001721 53.0 COG0322@1|root,COG0322@2|Bacteria,4NGEV@976|Bacteroidetes,1IZVS@117747|Sphingobacteriia 976|Bacteroidetes L Domain of unknown function (DUF4837) - - - - - - - - - - - - DUF4837 HSJS2_k127_3168318_0 379066.GAU_0737 1.001e-180 575.0 COG0587@1|root,COG0587@2|Bacteria,1ZT8N@142182|Gemmatimonadetes 142182|Gemmatimonadetes L Helix-hairpin-helix motif - - 2.7.7.7 ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_alpha,HHH_6,PHP HSJS2_k127_3190231_3 1232410.KI421421_gene3580 2.784e-53 195.0 COG1212@1|root,COG1212@2|Bacteria,1MUUU@1224|Proteobacteria,42PTX@68525|delta/epsilon subdivisions,2WMQW@28221|Deltaproteobacteria,43TY0@69541|Desulfuromonadales 28221|Deltaproteobacteria M Cytidylyltransferase kdsB - 2.7.7.38 ko:K00979 ko00540,ko01100,map00540,map01100 M00063 R03351,R11396 RC00152,RC00910 ko00000,ko00001,ko00002,ko01000,ko01005 - - - CTP_transf_3 HSJS2_k127_3190231_0 861299.J421_3257 1.099e-241 758.0 COG0504@1|root,COG0504@2|Bacteria,1ZT0J@142182|Gemmatimonadetes 142182|Gemmatimonadetes F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates pyrG - 6.3.4.2 ko:K01937 ko00240,ko01100,map00240,map01100 M00052 R00571,R00573 RC00010,RC00074 ko00000,ko00001,ko00002,ko01000 - - - CTP_synth_N,GATase HSJS2_k127_3190231_2 1379270.AUXF01000006_gene266 4.781e-76 284.0 COG2877@1|root,COG2877@2|Bacteria,1ZUCD@142182|Gemmatimonadetes 142182|Gemmatimonadetes M DAHP synthetase I family - - 2.5.1.55 ko:K01627 ko00540,ko01100,map00540,map01100 M00063 R03254 RC00435 ko00000,ko00001,ko00002,ko01000,ko01005 - - - DAHP_synth_1 HSJS2_k127_3190231_4 379066.GAU_1622 4.762e-35 142.0 COG1778@1|root,COG1778@2|Bacteria,1ZTTG@142182|Gemmatimonadetes 142182|Gemmatimonadetes S haloacid dehalogenase-like hydrolase - - 3.1.3.45 ko:K03270 ko00540,ko01100,map00540,map01100 M00063 R03350 RC00017 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Hydrolase_3 HSJS2_k127_3190231_1 880073.Calab_3121 2.013e-88 308.0 COG0517@1|root,COG0794@1|root,COG0517@2|Bacteria,COG0794@2|Bacteria,2NNNB@2323|unclassified Bacteria 2|Bacteria M Belongs to the SIS family. GutQ KpsF subfamily kdsD - 2.5.1.55,5.3.1.13 ko:K01627,ko:K03281,ko:K06041 ko00540,ko01100,map00540,map01100 M00063 R01530,R03254 RC00435,RC00541 ko00000,ko00001,ko00002,ko01000,ko01005 2.A.49 - iAF987.Gmet_1278 CBS,SIS HSJS2_k127_3190231_6 861299.J421_3253 1.55e-13 79.0 2DWX3@1|root,342B9@2|Bacteria,1ZTXN@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Lipopolysaccharide-assembly, LptC-related - - - - - - - - - - - - LptC HSJS2_k127_3190231_5 1379270.AUXF01000006_gene270 1.023e-18 100.0 2F01D@1|root,33T57@2|Bacteria,1ZTGK@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_3204902_5 861299.J421_5741 9.289e-10 61.0 COG0596@1|root,COG1228@1|root,COG0596@2|Bacteria,COG1228@2|Bacteria,1ZV1H@142182|Gemmatimonadetes 142182|Gemmatimonadetes Q Amidohydrolase family - - - - - - - - - - - - Amidohydro_1 HSJS2_k127_3204902_0 867903.ThesuDRAFT_00057 5.061e-186 596.0 COG1003@1|root,COG1003@2|Bacteria,1TPK9@1239|Firmicutes,2480Q@186801|Clostridia,3WCD1@538999|Clostridiales incertae sedis 186801|Clostridia E The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor gcvPB - 1.4.4.2 ko:K00283 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 - R01221,R03425 RC00022,RC00929,RC02834,RC02880 ko00000,ko00001,ko01000 - - - Aminotran_5,GDC-P HSJS2_k127_3204902_2 926550.CLDAP_35210 1.469e-58 211.0 COG2220@1|root,COG2220@2|Bacteria,2G6KN@200795|Chloroflexi 200795|Chloroflexi S Belongs to the UPF0173 family - - - - - - - - - - - - Lactamase_B_2,Lactamase_B_3 HSJS2_k127_3204902_1 1118054.CAGW01000078_gene3186 8.77e-135 449.0 COG0403@1|root,COG0403@2|Bacteria,1TQGG@1239|Firmicutes,4HA7P@91061|Bacilli,26RS0@186822|Paenibacillaceae 91061|Bacilli E The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor gcvPA - 1.4.4.2 ko:K00282 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 - R01221,R03425 RC00022,RC00929,RC02834,RC02880 ko00000,ko00001,ko01000 - - - GDC-P HSJS2_k127_3204902_3 861299.J421_2686 5.369e-43 161.0 COG0509@1|root,COG0509@2|Bacteria,1ZTWD@142182|Gemmatimonadetes 142182|Gemmatimonadetes E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein gcvH - - ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 M00532 R01221 RC00022,RC02834 ko00000,ko00001,ko00002 - - - GCV_H HSJS2_k127_3204902_4 502025.Hoch_5250 4.44e-33 136.0 COG4758@1|root,COG4758@2|Bacteria,1RANH@1224|Proteobacteria 1224|Proteobacteria S Cell wall-active antibiotics response 4TMS YvqF - - - - - - - - - - - - DUF1707,DUF2154 HSJS2_k127_3234761_0 861299.J421_1151 2.893e-146 475.0 COG0258@1|root,COG0749@1|root,COG0258@2|Bacteria,COG0749@2|Bacteria,1ZTCF@142182|Gemmatimonadetes 142182|Gemmatimonadetes L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity polA - 2.7.7.7 ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 - R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko01000,ko03032,ko03400 - - - 5_3_exonuc,5_3_exonuc_N,DNA_pol_A,DNA_pol_A_exo1 HSJS2_k127_3234761_1 469382.Hbor_14530 1.859e-18 93.0 COG5530@1|root,arCOG08962@2157|Archaea,2XTAU@28890|Euryarchaeota,23T0R@183963|Halobacteria 183963|Halobacteria S integral membrane protein - - - - - - - - - - - - DUF2270 HSJS2_k127_3240189_9 1379270.AUXF01000004_gene3073 9.116e-05 55.0 29W2Z@1|root,30HMM@2|Bacteria,1ZTXQ@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_3240189_2 1379270.AUXF01000004_gene3077 8.533e-73 253.0 COG0554@1|root,COG0554@2|Bacteria,1ZTX5@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate - - 2.7.1.30 ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 - R00847 RC00002,RC00017 ko00000,ko00001,ko01000,ko04147 - - - FGGY_C,FGGY_N HSJS2_k127_3240189_1 1305735.JAFT01000005_gene1690 7.418e-81 286.0 COG0554@1|root,COG0554@2|Bacteria,1MUP7@1224|Proteobacteria,2TRD7@28211|Alphaproteobacteria,2PCUN@252301|Oceanicola 28211|Alphaproteobacteria C Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate glpK GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 - R00847 RC00002,RC00017 ko00000,ko00001,ko01000,ko04147 - - - FGGY_C,FGGY_N HSJS2_k127_3240189_5 379066.GAU_2420 9.049e-45 175.0 COG0424@1|root,COG0424@2|Bacteria,1ZTP7@142182|Gemmatimonadetes 142182|Gemmatimonadetes D Maf-like protein - - - ko:K06287 - - - - ko00000 - - - Maf HSJS2_k127_3240189_4 1121405.dsmv_2102 7.187e-50 181.0 COG1490@1|root,COG1490@2|Bacteria,1RGTV@1224|Proteobacteria,42SMU@68525|delta/epsilon subdivisions,2WP4P@28221|Deltaproteobacteria,2MK67@213118|Desulfobacterales 28221|Deltaproteobacteria J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality dtd GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - ko:K07560 - - - - ko00000,ko01000,ko03016 - - - Tyr_Deacylase HSJS2_k127_3240189_7 1123278.KB893500_gene191 5.878e-18 97.0 COG0457@1|root,COG1680@1|root,COG0457@2|Bacteria,COG1680@2|Bacteria,4NI1Z@976|Bacteroidetes,47Q5S@768503|Cytophagia 976|Bacteroidetes V Beta-lactamase - - - - - - - - - - - - Beta-lactamase,DUF3471,TPR_2,TPR_8 HSJS2_k127_3240189_8 452637.Oter_0556 1.045e-17 96.0 COG3391@1|root,COG3391@2|Bacteria,46UA2@74201|Verrucomicrobia 74201|Verrucomicrobia O PFAM NHL repeat containing protein - - - - - - - - - - - - Ig_3,NHL HSJS2_k127_3240189_3 1056820.KB900663_gene3810 4.399e-54 192.0 COG0432@1|root,COG0432@2|Bacteria,1RH13@1224|Proteobacteria,1S3VP@1236|Gammaproteobacteria,2PNX1@256005|Alteromonadales genera incertae sedis 1236|Gammaproteobacteria S Uncharacterised protein family UPF0047 yjbQ - - - - - - - - - - - UPF0047 HSJS2_k127_3240189_0 1382356.JQMP01000003_gene1584 7.085e-307 971.0 COG0045@1|root,COG1042@1|root,COG0045@2|Bacteria,COG1042@2|Bacteria,2G5QB@200795|Chloroflexi,27XKK@189775|Thermomicrobia 189775|Thermomicrobia C Succinyl-CoA ligase like flavodoxin domain - - - - - - - - - - - - ATP-grasp_5,CoA_binding_2,Succ_CoA_lig HSJS2_k127_3240189_6 264732.Moth_0675 3.565e-40 160.0 COG0507@1|root,COG0551@1|root,COG1112@1|root,COG1502@1|root,COG0507@2|Bacteria,COG0551@2|Bacteria,COG1112@2|Bacteria,COG1502@2|Bacteria,1UNF1@1239|Firmicutes,24HXY@186801|Clostridia 186801|Clostridia L AAA domain - - - - - - - - - - - - AAA_11,AAA_12,zf-C4_Topoisom HSJS2_k127_3283038_0 1089550.ATTH01000001_gene1341 1.463e-189 608.0 COG0531@1|root,COG0531@2|Bacteria,4NFFX@976|Bacteroidetes,1FJSS@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes E Amino acid permease - - - - - - - - - - - - AA_permease HSJS2_k127_3285233_5 861299.J421_2752 3.201e-81 290.0 COG1760@1|root,COG1760@2|Bacteria,1ZT3U@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Serine dehydratase alpha chain - - 4.3.1.17 ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 - R00220,R00590 RC00331,RC02600 ko00000,ko00001,ko01000 - - - SDH_alpha HSJS2_k127_3285233_6 1379270.AUXF01000004_gene3065 6.673e-65 238.0 COG1760@1|root,COG1760@2|Bacteria,1ZTFS@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Serine dehydratase beta chain - - 4.3.1.17 ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 - R00220,R00590 RC00331,RC02600 ko00000,ko00001,ko01000 - - - ACT,SDH_beta HSJS2_k127_3285233_7 861299.J421_2661 2.476e-57 209.0 COG0321@1|root,COG0321@2|Bacteria,1ZTM1@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate lipB - 2.3.1.181 ko:K03801 ko00785,ko01100,map00785,map01100 - R07766,R07769 RC00039,RC00992,RC02867 ko00000,ko00001,ko01000 - - - BPL_LplA_LipB HSJS2_k127_3285233_0 1237149.C900_00490 1.495e-141 464.0 COG1249@1|root,COG1249@2|Bacteria,4NDVC@976|Bacteroidetes,47JS2@768503|Cytophagia 976|Bacteroidetes C dihydrolipoamide dehydrogenase lpdA - 1.8.1.4 ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00036,M00307,M00532 R00209,R01221,R01698,R03815,R07618,R08549 RC00004,RC00022,RC00583,RC02742,RC02833,RC02834 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 - - - Pyr_redox_2,Pyr_redox_dim HSJS2_k127_3285233_3 861299.J421_2666 2.802e-110 372.0 COG0508@1|root,COG0508@2|Bacteria,1ZSYJ@142182|Gemmatimonadetes 142182|Gemmatimonadetes C The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) - - 2.3.1.12 ko:K00627 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200 M00307 R00209,R02569 RC00004,RC02742,RC02857 br01601,ko00000,ko00001,ko00002,ko01000 - - - 2-oxoacid_dh,Biotin_lipoyl,E3_binding HSJS2_k127_3285233_1 861299.J421_2667 2.297e-137 457.0 COG0022@1|root,COG0022@2|Bacteria,1ZTA8@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Transketolase, pyrimidine binding domain - - 1.2.4.1 ko:K00162 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00307 R00014,R00209,R01699,R03270 RC00004,RC00027,RC00627,RC02742,RC02744,RC02882 br01601,ko00000,ko00001,ko00002,ko01000 - - - Transket_pyr,Transketolase_C HSJS2_k127_3285233_4 861299.J421_2668 5.203e-105 360.0 COG1071@1|root,COG1071@2|Bacteria,1ZT5G@142182|Gemmatimonadetes 142182|Gemmatimonadetes C The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) pdhA - 1.2.4.1 ko:K00161 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00307 R00014,R00209,R01699,R03270 RC00004,RC00027,RC00627,RC02742,RC02744,RC02882 br01601,ko00000,ko00001,ko00002,ko01000 - - - E1_dh HSJS2_k127_3285233_2 1379270.AUXF01000004_gene3127 3.38e-113 375.0 COG0320@1|root,COG0320@2|Bacteria,1ZTA3@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives lipA - 2.8.1.8 ko:K03644 ko00785,ko01100,map00785,map01100 - R07767,R07768 RC01978 ko00000,ko00001,ko01000 - - - LIAS_N,Radical_SAM HSJS2_k127_3285233_8 383372.Rcas_0253 6.23e-30 135.0 COG1146@1|root,COG1146@2|Bacteria,2G75G@200795|Chloroflexi,375SD@32061|Chloroflexia 32061|Chloroflexia C PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - - - - - - - - - - Fer4,Fer4_4 HSJS2_k127_3285233_9 1048339.KB913029_gene4390 4.026e-11 75.0 COG3794@1|root,COG3794@2|Bacteria,2IR44@201174|Actinobacteria 201174|Actinobacteria C PFAM blue (type 1) copper domain protein - - - - - - - - - - - - - HSJS2_k127_3288918_1 861299.J421_2339 3.803e-74 284.0 COG2911@1|root,COG2911@2|Bacteria,1ZT97@142182|Gemmatimonadetes 2|Bacteria S TamB, inner membrane protein subunit of TAM complex tamB - - ko:K09800 - - - - ko00000,ko02000 - - - TamB HSJS2_k127_3288918_0 518766.Rmar_1819 3.139e-94 318.0 COG0501@1|root,COG0501@2|Bacteria,4PEI7@976|Bacteroidetes,1FJ5Y@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes M Belongs to the peptidase M48B family htpX - - ko:K03799 - M00743 - - ko00000,ko00002,ko01000,ko01002 - - - Peptidase_M48 HSJS2_k127_3288918_2 1128421.JAGA01000002_gene868 1.478e-24 111.0 COG1597@1|root,COG1597@2|Bacteria 2|Bacteria I lipid kinase activity mgsA - - - - - - - - - - - DAGK_cat,DSPc,MGS HSJS2_k127_3306750_0 861299.J421_3164 1.216e-160 511.0 COG0459@1|root,COG0459@2|Bacteria,1ZTC5@142182|Gemmatimonadetes 142182|Gemmatimonadetes O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions - - - ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 - - - ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 - - - Cpn60_TCP1 HSJS2_k127_3306750_1 1519464.HY22_02515 2.583e-34 135.0 COG0234@1|root,COG0234@2|Bacteria,1FE2T@1090|Chlorobi 1090|Chlorobi J Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter groS - - ko:K04078 - - - - ko00000,ko03029,ko03110 - - - Cpn10 HSJS2_k127_3306750_2 861299.J421_4052 9.479e-34 141.0 COG0515@1|root,COG0515@2|Bacteria 861299.J421_4052|- KLT protein kinase activity - - - - - - - - - - - - - HSJS2_k127_3316065_0 518766.Rmar_0596 1.266e-128 428.0 COG0301@1|root,COG0607@1|root,COG0301@2|Bacteria,COG0607@2|Bacteria 2|Bacteria P Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS thiI GO:0000049,GO:0002937,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017144,GO:0018130,GO:0019438,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0042364,GO:0042723,GO:0042724,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.8.1.4 ko:K03151 ko00730,ko01100,ko04122,map00730,map01100,map04122 - R07461 - ko00000,ko00001,ko01000,ko03016 - - iECNA114_1301.ECNA114_0400,iECO26_1355.ECO26_0455,iECSF_1327.ECSF_0383,iSDY_1059.SDY_0307 THUMP,ThiI HSJS2_k127_3316065_2 429009.Adeg_0583 4.958e-84 287.0 COG0020@1|root,COG0020@2|Bacteria,1TQTS@1239|Firmicutes,247TE@186801|Clostridia,42F7X@68295|Thermoanaerobacterales 186801|Clostridia H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids uppS - 2.5.1.31 ko:K00806 ko00900,ko01110,map00900,map01110 - R06447 RC00279,RC02839 ko00000,ko00001,ko01000,ko01006 - - - Prenyltransf HSJS2_k127_3316065_4 861299.J421_3407 1.172e-35 146.0 COG4589@1|root,COG4589@2|Bacteria,1ZTGH@142182|Gemmatimonadetes 142182|Gemmatimonadetes I Cytidylyltransferase family - - 2.7.7.41 ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 M00093 R01799 RC00002 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_1 HSJS2_k127_3316065_1 861299.J421_3406 2.368e-109 379.0 COG0743@1|root,COG0743@2|Bacteria,1ZTFR@142182|Gemmatimonadetes 142182|Gemmatimonadetes I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) dxr - 1.1.1.267 ko:K00099 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05688 RC01452 ko00000,ko00001,ko00002,ko01000 - - - DXPR_C,DXP_redisom_C,DXP_reductoisom HSJS2_k127_3316065_3 1125863.JAFN01000001_gene963 1.98e-36 145.0 COG0750@1|root,COG0750@2|Bacteria,1MU91@1224|Proteobacteria,42NJ0@68525|delta/epsilon subdivisions,2WJ7A@28221|Deltaproteobacteria 28221|Deltaproteobacteria M SMART PDZ DHR GLGF domain protein rseP - - ko:K11749 ko02024,ko04112,map02024,map04112 - - - ko00000,ko00001,ko01000,ko01002 - - - PDZ,PDZ_2,Peptidase_M50 HSJS2_k127_3326928_1 646529.Desaci_3701 6.616e-97 331.0 COG0474@1|root,COG0474@2|Bacteria,1TPF5@1239|Firmicutes,247JN@186801|Clostridia,25ZY7@186807|Peptococcaceae 186801|Clostridia P ATPase, P-type (transporting), HAD superfamily, subfamily IC - - 3.6.3.8 ko:K01537 - - - - ko00000,ko01000 3.A.3.2 - - Cation_ATPase,Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase HSJS2_k127_3326928_2 56107.Cylst_1842 1.206e-70 264.0 COG0745@1|root,COG2198@1|root,COG2202@1|root,COG2203@1|root,COG2204@1|root,COG3437@1|root,COG5002@1|root,COG0745@2|Bacteria,COG2198@2|Bacteria,COG2202@2|Bacteria,COG2203@2|Bacteria,COG2204@2|Bacteria,COG3437@2|Bacteria,COG5002@2|Bacteria,1G027@1117|Cyanobacteria,1HKPC@1161|Nostocales 1117|Cyanobacteria T COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - - - - - - - - - - GAF_2,GGDEF,HATPase_c,HisKA,Hpt,PAS_3,PAS_9,Response_reg,Trans_reg_C HSJS2_k127_3326928_0 1379698.RBG1_1C00001G1210 4.47e-124 413.0 COG2204@1|root,COG2204@2|Bacteria,2NNWS@2323|unclassified Bacteria 2|Bacteria T Two component, sigma54 specific, transcriptional regulator, Fis family nla19 - - ko:K02667,ko:K07713,ko:K07714,ko:K19641 ko02020,map02020 M00499,M00500,M00501,M00772 - - ko00000,ko00001,ko00002,ko02022,ko02035 - - - HTH_8,Response_reg,Sigma54_activat HSJS2_k127_3338704_0 626887.J057_13716 1.898e-26 122.0 COG1651@1|root,COG1651@2|Bacteria,1MX2T@1224|Proteobacteria,1SASV@1236|Gammaproteobacteria 1236|Gammaproteobacteria O COG1651 Protein-disulfide isomerase - - - - - - - - - - - - Thioredoxin_4 HSJS2_k127_3338704_1 479434.Sthe_0626 2.654e-08 56.0 COG0546@1|root,COG0546@2|Bacteria,2G9CI@200795|Chloroflexi,27YAX@189775|Thermomicrobia 200795|Chloroflexi S haloacid dehalogenase-like hydrolase - - - - - - - - - - - - HAD,HAD_2 HSJS2_k127_3339315_1 525904.Tter_1614 5.141e-35 146.0 COG0768@1|root,COG0768@2|Bacteria,2NNWR@2323|unclassified Bacteria 2|Bacteria M Penicillin-binding Protein dimerisation domain ftsI GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008144,GO:0008150,GO:0008658,GO:0008955,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0031224,GO:0031226,GO:0031406,GO:0032153,GO:0033218,GO:0033293,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:1901363,GO:1901681 3.4.16.4 ko:K03587,ko:K08384 ko00550,ko01501,map00550,map01501 - - - ko00000,ko00001,ko01000,ko01011,ko03036 - - iSSON_1240.SSON_0092 PASTA,PBP_dimer,Transpeptidase HSJS2_k127_3339315_0 861299.J421_3068 2.711e-78 275.0 COG0275@1|root,COG0275@2|Bacteria,1ZT4V@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA rsmH - 2.1.1.199 ko:K03438 - - - - ko00000,ko01000,ko03009 - - - Methyltransf_5 HSJS2_k127_3339315_2 1444309.JAQG01000057_gene4902 3.76e-20 96.0 COG2001@1|root,COG2001@2|Bacteria,1V3JD@1239|Firmicutes,4HH23@91061|Bacilli,26WUX@186822|Paenibacillaceae 91061|Bacilli K Belongs to the MraZ family mraZ GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - ko:K03925 - - - - ko00000 - - - MraZ HSJS2_k127_3347378_3 929558.SMGD1_1957 1.54e-47 183.0 COG1368@1|root,COG1368@2|Bacteria,1MVCM@1224|Proteobacteria,42P62@68525|delta/epsilon subdivisions 1224|Proteobacteria M Sulfatase mdoB GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006490,GO:0006629,GO:0008150,GO:0008152,GO:0008960,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0042597,GO:0044237,GO:0044238,GO:0044255,GO:0044464,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901576 2.7.8.20 ko:K01002 ko01100,map01100 - - - ko00000,ko01000 - - - Sulfatase HSJS2_k127_3347378_0 1121405.dsmv_3480 1.752e-143 488.0 COG1574@1|root,COG1574@2|Bacteria,1MWP2@1224|Proteobacteria,42SZ7@68525|delta/epsilon subdivisions,2WPA5@28221|Deltaproteobacteria,2MKE2@213118|Desulfobacterales 28221|Deltaproteobacteria S Amidohydrolase family - - - - - - - - - - - - Amidohydro_3 HSJS2_k127_3347378_1 1192034.CAP_7003 1.232e-123 421.0 COG0626@1|root,COG0626@2|Bacteria,1MU57@1224|Proteobacteria,42M67@68525|delta/epsilon subdivisions,2WJQX@28221|Deltaproteobacteria 28221|Deltaproteobacteria E Cys Met metabolism - - 2.5.1.48,4.4.1.11,4.4.1.8 ko:K01739,ko:K01760,ko:K01761 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 M00017 R00654,R00782,R00999,R01286,R01288,R02408,R02508,R03217,R03260,R04770,R04941,R04944,R04945,R04946 RC00020,RC00056,RC00069,RC00196,RC00348,RC00382,RC00420,RC00488,RC00710,RC01209,RC01210,RC01245,RC02303,RC02848,RC02866 ko00000,ko00001,ko00002,ko01000 - - - Cys_Met_Meta_PP HSJS2_k127_3347378_2 1255043.TVNIR_2234 1.345e-89 310.0 COG1914@1|root,COG1914@2|Bacteria,1MWET@1224|Proteobacteria,1RY2N@1236|Gammaproteobacteria 1236|Gammaproteobacteria P Mn2 and Fe2 transporters of the NRAMP family Z012_09610 - - - - - - - - - - - Nramp HSJS2_k127_3347378_5 997346.HMPREF9374_0031 8.285e-08 55.0 COG3526@1|root,COG3526@2|Bacteria,1VKFI@1239|Firmicutes,4HR9S@91061|Bacilli 91061|Bacilli O Rdx family - - - ko:K07401 - - - - ko00000 - - - Rdx HSJS2_k127_3347378_4 518766.Rmar_1178 1.176e-15 78.0 COG3591@1|root,COG3591@2|Bacteria,4NEAK@976|Bacteroidetes,1FJT8@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes E Peptidase S46 dpp7 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009056,GO:0009279,GO:0009986,GO:0009987,GO:0016020,GO:0016049,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030154,GO:0030312,GO:0030313,GO:0031975,GO:0032502,GO:0033218,GO:0034641,GO:0040007,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044462,GO:0044464,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048869,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - - - - - - - - - - Peptidase_S46 HSJS2_k127_3361093_2 861299.J421_2948 1.512e-81 287.0 COG0823@1|root,COG4775@1|root,COG0823@2|Bacteria,COG4775@2|Bacteria,1ZSUS@142182|Gemmatimonadetes 142182|Gemmatimonadetes MU Involved in the tonB-independent uptake of proteins - - - - - - - - - - - - Bac_surface_Ag,PD40 HSJS2_k127_3361093_4 648996.Theam_0121 7.172e-26 112.0 COG0799@1|root,COG0799@2|Bacteria,2G49D@200783|Aquificae 200783|Aquificae J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation rsfS - - ko:K09710 - - - - ko00000,ko03009 - - - RsfS HSJS2_k127_3361093_1 1121441.AUCX01000012_gene3272 9.18e-92 325.0 COG1461@1|root,COG1461@2|Bacteria,1NKAM@1224|Proteobacteria,42U2G@68525|delta/epsilon subdivisions,2WQBG@28221|Deltaproteobacteria,2M8TG@213115|Desulfovibrionales 28221|Deltaproteobacteria S Dihydroxyacetone kinase family - - - ko:K07030 - - - - ko00000 - - - Dak2,DegV HSJS2_k127_3361093_3 880073.Calab_2408 1.065e-39 152.0 COG0359@1|root,COG0359@2|Bacteria,2NPX4@2323|unclassified Bacteria 2|Bacteria J Binds to the 23S rRNA rplI GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02939 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L9_C,Ribosomal_L9_N HSJS2_k127_3361093_6 861299.J421_2951 1.507e-16 91.0 2F1RZ@1|root,33US3@2|Bacteria,1ZUSC@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - DUF2232 HSJS2_k127_3361093_5 1304885.AUEY01000010_gene1648 4.151e-21 94.0 COG0238@1|root,COG0238@2|Bacteria,1MZ8U@1224|Proteobacteria,42VJQ@68525|delta/epsilon subdivisions,2WR7Z@28221|Deltaproteobacteria,2MKM0@213118|Desulfobacterales 28221|Deltaproteobacteria J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit rpsR GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02963 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S18 HSJS2_k127_3361093_7 379066.GAU_1206 4.016e-16 87.0 COG0360@1|root,COG0360@2|Bacteria,1ZTYY@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Binds together with S18 to 16S ribosomal RNA rpsF - - ko:K02990 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011,ko03029 - - - Ribosomal_S6 HSJS2_k127_3361093_0 338963.Pcar_2001 1.178e-126 412.0 COG3808@1|root,COG3808@2|Bacteria,1MUQ3@1224|Proteobacteria,42N1H@68525|delta/epsilon subdivisions,2WJ0R@28221|Deltaproteobacteria,43SBR@69541|Desulfuromonadales 28221|Deltaproteobacteria C Inorganic H+ pyrophosphatase hppA - 3.6.1.1 ko:K15987 ko00190,map00190 - - - ko00000,ko00001,ko01000 3.A.10.1 - - H_PPase HSJS2_k127_3361797_0 1382304.JNIL01000001_gene1994 5.03e-314 981.0 COG0542@1|root,COG0542@2|Bacteria,1TPMU@1239|Firmicutes,4HACY@91061|Bacilli,277VJ@186823|Alicyclobacillaceae 91061|Bacilli O Belongs to the ClpA ClpB family clpC GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 - ko:K03696 ko01100,map01100 - - - ko00000,ko03110 - - - AAA,AAA_2,ClpB_D2-small,Clp_N,UVR HSJS2_k127_3361797_3 861299.J421_3216 1.832e-105 361.0 COG3869@1|root,COG3869@2|Bacteria,1ZT9I@142182|Gemmatimonadetes 142182|Gemmatimonadetes F ATP:guanido phosphotransferase, C-terminal catalytic domain - - 2.7.14.1 ko:K19405 - - R11090 RC00002,RC00203 ko00000,ko01000 - - - ATP-gua_Ptrans HSJS2_k127_3361797_6 1379270.AUXF01000006_gene306 7.177e-37 144.0 COG3880@1|root,COG3880@2|Bacteria,1ZTPQ@142182|Gemmatimonadetes 142182|Gemmatimonadetes S UvrB/uvrC motif - - - ko:K19411 - - - - ko00000 - - - UVR HSJS2_k127_3361797_5 1125863.JAFN01000001_gene3407 2.947e-76 266.0 COG1136@1|root,COG1136@2|Bacteria,1MVSQ@1224|Proteobacteria,42QNS@68525|delta/epsilon subdivisions,2WMSN@28221|Deltaproteobacteria 28221|Deltaproteobacteria V Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner lolD - - ko:K09810 ko02010,map02010 M00255 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.125 - - ABC_tran HSJS2_k127_3361797_4 1379270.AUXF01000006_gene308 3.773e-94 328.0 COG4591@1|root,COG4591@2|Bacteria,1ZT1N@142182|Gemmatimonadetes 142182|Gemmatimonadetes M MacB-like periplasmic core domain - - - ko:K09808 ko02010,map02010 M00255 - - ko00000,ko00001,ko00002,ko02000 3.A.1.125 - - FtsX,MacB_PCD HSJS2_k127_3361797_1 880073.Calab_1380 2.302e-164 539.0 COG1190@1|root,COG1190@2|Bacteria,2NNMH@2323|unclassified Bacteria 2|Bacteria J Belongs to the class-II aminoacyl-tRNA synthetase family lysS - 6.1.1.6 ko:K04567 ko00970,map00970 M00359,M00360 R03658 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - DUF4332,tRNA-synt_2,tRNA_anti-codon HSJS2_k127_3361797_2 1329516.JPST01000014_gene458 1.525e-118 389.0 COG1186@1|root,COG1186@2|Bacteria,1TPSB@1239|Firmicutes,4H9N2@91061|Bacilli,27BF4@186824|Thermoactinomycetaceae 91061|Bacilli J PCRF prfB GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - ko:K02836 - - - - ko00000,ko03012 - - - PCRF,RF-1 HSJS2_k127_3366045_1 1279009.ADICEAN_00442 1.677e-26 117.0 COG0345@1|root,COG0345@2|Bacteria,4NE6F@976|Bacteroidetes,47XP8@768503|Cytophagia 976|Bacteroidetes E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline proC - 1.5.1.2 ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 M00015 R01248,R01251,R03291,R03293 RC00054,RC00083 ko00000,ko00001,ko00002,ko01000 - - - F420_oxidored,P5CR_dimer HSJS2_k127_3366045_0 1189612.A33Q_2009 1.942e-165 528.0 COG0626@1|root,COG0626@2|Bacteria,4PKE6@976|Bacteroidetes,47KC8@768503|Cytophagia 976|Bacteroidetes E Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide - - 2.5.1.48,4.4.1.8 ko:K01739,ko:K01760 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 M00017 R00782,R00999,R01286,R01288,R02408,R02508,R03217,R03260,R04941,R04944,R04945,R04946 RC00020,RC00056,RC00069,RC00382,RC00420,RC00488,RC00710,RC01245,RC02303,RC02848,RC02866 ko00000,ko00001,ko00002,ko01000 - - - Cys_Met_Meta_PP HSJS2_k127_3375163_3 861299.J421_3749 2.703e-31 125.0 COG1721@1|root,COG1721@2|Bacteria,1ZT0H@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Protein of unknown function DUF58 - - - - - - - - - - - - DUF58 HSJS2_k127_3375163_0 1121930.AQXG01000005_gene724 1.324e-65 247.0 COG2234@1|root,COG2234@2|Bacteria,4NFDJ@976|Bacteroidetes,1IQ2M@117747|Sphingobacteriia 976|Bacteroidetes S peptidase - - - - - - - - - - - - PA,Peptidase_M28 HSJS2_k127_3375163_4 401053.AciPR4_3009 0.0002432 50.0 COG4980@1|root,COG4980@2|Bacteria,3Y5IA@57723|Acidobacteria,2JK01@204432|Acidobacteriia 204432|Acidobacteriia S YtxH-like protein - - - - - - - - - - - - YtxH HSJS2_k127_3375163_2 861299.J421_2878 1.256e-34 149.0 COG1295@1|root,COG1295@2|Bacteria,1ZTHX@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Virulence factor BrkB - - - ko:K07058 - - - - ko00000 - - - Virul_fac_BrkB HSJS2_k127_3375163_1 429009.Adeg_1493 2.172e-46 173.0 COG0691@1|root,COG0691@2|Bacteria,1V3IJ@1239|Firmicutes,24HD6@186801|Clostridia,42GC6@68295|Thermoanaerobacterales 186801|Clostridia J Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene smpB - - ko:K03664 - - - - ko00000 - - - SmpB HSJS2_k127_3382295_0 1121104.AQXH01000001_gene2028 0.0 1174.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,1IQYT@117747|Sphingobacteriia 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ACR_tran HSJS2_k127_3382295_3 518766.Rmar_0880 3.038e-56 210.0 COG0845@1|root,COG0845@2|Bacteria,4NERP@976|Bacteroidetes,1FJ10@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - HlyD_D23 HSJS2_k127_3382295_2 1121930.AQXG01000001_gene1200 3.032e-76 275.0 COG1538@1|root,COG1538@2|Bacteria,4NF4X@976|Bacteroidetes 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP HSJS2_k127_3382295_4 1223542.GM1_019_00130 1.329e-21 104.0 COG1309@1|root,COG1309@2|Bacteria,2GP91@201174|Actinobacteria,4GAVW@85026|Gordoniaceae 201174|Actinobacteria K WHG domain - - - - - - - - - - - - TetR_N,WHG HSJS2_k127_3382295_1 42256.RradSPS_2501 2.294e-100 341.0 COG0624@1|root,COG0624@2|Bacteria,2GMH2@201174|Actinobacteria,4CQUX@84995|Rubrobacteria 84995|Rubrobacteria E Peptidase M20 - - 3.4.17.11 ko:K01295 - - - - ko00000,ko01000,ko01002 - - - M20_dimer,Peptidase_M20 HSJS2_k127_33868_1 383372.Rcas_2515 2.66e-154 499.0 COG0205@1|root,COG0205@2|Bacteria,2G6CJ@200795|Chloroflexi,374WW@32061|Chloroflexia 32061|Chloroflexia F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis pfkA - 2.7.1.11,2.7.1.90 ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130 - R00756,R00764,R02073,R03236,R04779 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PFK HSJS2_k127_33868_0 309807.SRU_2275 4.343e-223 715.0 COG0531@1|root,COG0569@1|root,COG1762@1|root,COG0531@2|Bacteria,COG0569@2|Bacteria,COG1762@2|Bacteria,4NDU2@976|Bacteroidetes,1FJTH@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes EGPT Amino acid permease - - - - - - - - - - - - AA_permease,AA_permease_2,PTS_EIIA_2,TrkA_C,Usp HSJS2_k127_33868_2 1396418.BATQ01000149_gene2216 1.139e-91 312.0 COG3174@1|root,COG3174@2|Bacteria,46VTJ@74201|Verrucomicrobia 74201|Verrucomicrobia S Domain of unknown function (DUF4010) - - - - - - - - - - - - DUF4010,MgtC HSJS2_k127_3394102_3 1480694.DC28_11320 6.786e-35 152.0 COG0054@1|root,COG0054@2|Bacteria,2J7D1@203691|Spirochaetes 203691|Spirochaetes H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin ribH - 2.5.1.78 ko:K00794 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R04457 RC00960 ko00000,ko00001,ko00002,ko01000 - - - DMRL_synthase HSJS2_k127_3394102_0 404589.Anae109_2729 3.332e-161 517.0 COG0108@1|root,COG0807@1|root,COG0108@2|Bacteria,COG0807@2|Bacteria,1MU8P@1224|Proteobacteria,42N1C@68525|delta/epsilon subdivisions,2WIP5@28221|Deltaproteobacteria,2YUHV@29|Myxococcales 28221|Deltaproteobacteria H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate ribBA - 3.5.4.25,4.1.99.12 ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 M00125,M00840 R00425,R07281 RC00293,RC01792,RC01815,RC02504 ko00000,ko00001,ko00002,ko01000 - - - DHBP_synthase,GTP_cyclohydro2 HSJS2_k127_3394102_2 700508.D174_13120 1.149e-43 177.0 COG0307@1|root,COG0307@2|Bacteria,2GKC5@201174|Actinobacteria,2344A@1762|Mycobacteriaceae 201174|Actinobacteria H riboflavin synthase alpha ribE GO:0003674,GO:0003824,GO:0004746,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.9 ko:K00793 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R00066 RC00958,RC00960 ko00000,ko00001,ko00002,ko01000 - - - Lum_binding HSJS2_k127_3394102_1 861299.J421_3114 1.078e-82 289.0 COG0117@1|root,COG1985@1|root,COG0117@2|Bacteria,COG1985@2|Bacteria,1ZSNI@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate - - 1.1.1.193,3.5.4.26 ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 M00125 R03458,R03459 RC00204,RC00933 ko00000,ko00001,ko00002,ko01000 - - - RibD_C,dCMP_cyt_deam_1 HSJS2_k127_3394102_4 546271.Selsp_1016 8.978e-19 89.0 COG0150@1|root,COG0150@2|Bacteria,1TP9J@1239|Firmicutes,4H3CU@909932|Negativicutes 909932|Negativicutes F Phosphoribosylformylglycinamidine cyclo-ligase purM - 6.3.3.1 ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04208 RC01100 ko00000,ko00001,ko00002,ko01000 - - - AIRS,AIRS_C HSJS2_k127_3400628_0 518766.Rmar_2008 1.885e-179 572.0 COG1012@1|root,COG1012@2|Bacteria,4NEB7@976|Bacteroidetes,1FJ1P@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes C Aldehyde dehydrogenase family - - 1.2.1.16,1.2.1.20,1.2.1.3,1.2.1.79 ko:K00128,ko:K00135 ko00010,ko00053,ko00071,ko00250,ko00280,ko00310,ko00330,ko00340,ko00350,ko00380,ko00410,ko00561,ko00620,ko00625,ko00650,ko00760,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00250,map00280,map00310,map00330,map00340,map00350,map00380,map00410,map00561,map00620,map00625,map00650,map00760,map00903,map00981,map01100,map01110,map01120,map01130 M00027,M00135 R00264,R00631,R00710,R00713,R00714,R00904,R01752,R01986,R02401,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146 RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500 ko00000,ko00001,ko00002,ko01000 - - - Aldedh HSJS2_k127_3436347_3 469383.Cwoe_5609 7.471e-17 93.0 COG0558@1|root,COG0558@2|Bacteria,2H9R3@201174|Actinobacteria 201174|Actinobacteria I CDP-alcohol phosphatidyltransferase - - - - - - - - - - - - CDP-OH_P_transf HSJS2_k127_3436347_1 743722.Sph21_5208 1.468e-83 287.0 COG4221@1|root,COG4221@2|Bacteria,4NE1R@976|Bacteroidetes,1INN2@117747|Sphingobacteriia 976|Bacteroidetes NU Belongs to the short-chain dehydrogenases reductases (SDR) family ydfG - - - - - - - - - - - adh_short HSJS2_k127_3436347_0 861299.J421_4260 2.025e-109 379.0 COG1629@1|root,COG4771@2|Bacteria 2|Bacteria P TonB-dependent receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - CarbopepD_reg_2,Plug,TonB_dep_Rec HSJS2_k127_3436347_2 1242864.D187_006584 3.551e-68 244.0 COG0204@1|root,COG0204@2|Bacteria,1R72B@1224|Proteobacteria 1224|Proteobacteria I COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - - - - - - - - - - - - Acyltransferase HSJS2_k127_3442344_0 1121930.AQXG01000009_gene256 2.384e-199 634.0 COG1012@1|root,COG1012@2|Bacteria,4NFPJ@976|Bacteroidetes,1INP0@117747|Sphingobacteriia 976|Bacteroidetes C Belongs to the aldehyde dehydrogenase family pcd - 1.2.1.3 ko:K00128 ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130 M00135 R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146 RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500 ko00000,ko00001,ko00002,ko01000 - - - Aldedh HSJS2_k127_3442344_1 765912.Thimo_1384 4.97e-153 490.0 COG1064@1|root,COG1064@2|Bacteria,1MUTT@1224|Proteobacteria,1RPQC@1236|Gammaproteobacteria,1X2A7@135613|Chromatiales 135613|Chromatiales S alcohol dehydrogenase - - 1.1.1.1 ko:K13953 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 - R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310 RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273 ko00000,ko00001,ko01000 - - - ADH_N HSJS2_k127_3455339_2 1379270.AUXF01000005_gene516 2.271e-47 182.0 COG3170@1|root,COG3170@2|Bacteria,1ZTDF@142182|Gemmatimonadetes 142182|Gemmatimonadetes NU Protein of unknown function (DUF3108) - - - - - - - - - - - - DUF3108 HSJS2_k127_3455339_0 861299.J421_2672 1.063e-112 387.0 COG1899@1|root,COG1899@2|Bacteria 2|Bacteria O peptidyl-lysine modification to peptidyl-hypusine - - - - - - - - - - - - - HSJS2_k127_3455339_4 861299.J421_4201 8.188e-15 78.0 2CA00@1|root,344QM@2|Bacteria,1ZU1Z@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_3455339_1 1379270.AUXF01000003_gene3384 9.441e-105 356.0 COG1253@1|root,COG1253@2|Bacteria,1ZT0D@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Transporter associated domain - - - - - - - - - - - - CBS,CorC_HlyC,DUF21 HSJS2_k127_3455339_3 1379270.AUXF01000001_gene2783 2.15e-40 158.0 COG0457@1|root,COG0457@2|Bacteria,1ZSYB@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_16,TPR_2 HSJS2_k127_3505378_2 941449.dsx2_0414 2.312e-38 156.0 COG1449@1|root,COG1449@2|Bacteria,1PUYM@1224|Proteobacteria,42MQP@68525|delta/epsilon subdivisions,2WKP2@28221|Deltaproteobacteria,2M8R3@213115|Desulfovibrionales 28221|Deltaproteobacteria G Belongs to the glycosyl hydrolase 57 family - - - - - - - - - - - - DUF3536,Glyco_hydro_57 HSJS2_k127_3505378_0 1173027.Mic7113_3739 2.832e-263 847.0 COG0296@1|root,COG0296@2|Bacteria,1GD05@1117|Cyanobacteria,1HEAH@1150|Oscillatoriales 1117|Cyanobacteria G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position - - 2.4.1.18 ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 M00565 R02110 - ko00000,ko00001,ko00002,ko01000,ko04147 - CBM48,GH13 - Alpha-amylase,Alpha-amylase_C,CBM_48 HSJS2_k127_3505378_1 1121468.AUBR01000021_gene2827 1.014e-85 301.0 COG1640@1|root,COG1640@2|Bacteria,1W5VQ@1239|Firmicutes,25E46@186801|Clostridia,42FUX@68295|Thermoanaerobacterales 186801|Clostridia G 4-alpha-glucanotransferase malQ - 2.4.1.25 ko:K00705 ko00500,ko01100,map00500,map01100 - R05196 RC00049 ko00000,ko00001,ko01000 - GH77 - Glyco_hydro_77 HSJS2_k127_35157_6 479434.Sthe_3098 2.951e-32 129.0 COG1162@1|root,COG1162@2|Bacteria,2G5IS@200795|Chloroflexi,27XYY@189775|Thermomicrobia 189775|Thermomicrobia S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit rsgA - 3.1.3.100 ko:K06949 ko00730,ko01100,map00730,map01100 - R00615,R02135 RC00002,RC00017 ko00000,ko00001,ko01000,ko03009 - - - RsgA_GTPase,RsgA_N HSJS2_k127_35157_5 861299.J421_4367 6.916e-34 143.0 COG1051@1|root,COG1051@2|Bacteria,1ZU0E@142182|Gemmatimonadetes 142182|Gemmatimonadetes F NUDIX domain - - - - - - - - - - - - NUDIX HSJS2_k127_35157_7 247490.KSU1_D0904 3.911e-15 90.0 COG1807@1|root,COG1807@2|Bacteria,2J1H1@203682|Planctomycetes 203682|Planctomycetes M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - - - - - - - - - - PMT_2 HSJS2_k127_35157_1 404589.Anae109_2847 7.853e-123 405.0 COG0823@1|root,COG0823@2|Bacteria,1QW3I@1224|Proteobacteria,42YA5@68525|delta/epsilon subdivisions,2WU6I@28221|Deltaproteobacteria,2Z3J0@29|Myxococcales 28221|Deltaproteobacteria U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 HSJS2_k127_35157_8 314265.R2601_11214 1.797e-14 77.0 COG0694@1|root,COG0694@2|Bacteria,1MVQ1@1224|Proteobacteria,2TUD1@28211|Alphaproteobacteria 28211|Alphaproteobacteria O COG0694 Thioredoxin-like proteins and domains nifU - - - - - - - - - - - Nfu_N,NifU HSJS2_k127_35157_2 478741.JAFS01000001_gene1396 4.674e-109 368.0 COG0160@1|root,COG0160@2|Bacteria,46TQB@74201|Verrucomicrobia,37FW4@326457|unclassified Verrucomicrobia 74201|Verrucomicrobia E Aminotransferase class-III gabT - - - - - - - - - - - Aminotran_3 HSJS2_k127_35157_4 266117.Rxyl_2798 8.989e-73 254.0 COG1028@1|root,COG1028@2|Bacteria,2GJU1@201174|Actinobacteria,4CQ7J@84995|Rubrobacteria 84995|Rubrobacteria IQ Short-chain dehydrogenase reductase SDR - - - - - - - - - - - - adh_short_C2 HSJS2_k127_35157_9 886293.Sinac_2233 4.303e-11 75.0 COG4911@1|root,COG4911@2|Bacteria,2J02T@203682|Planctomycetes 203682|Planctomycetes S conserved protein (DUF2203) - - - - - - - - - - - - DUF2203 HSJS2_k127_35157_0 861299.J421_1323 1.033e-159 518.0 COG0137@1|root,COG0137@2|Bacteria,1ZTYP@142182|Gemmatimonadetes 142182|Gemmatimonadetes F Arginosuccinate synthase argG - 6.3.4.5 ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 M00029,M00844,M00845 R01954 RC00380,RC00629 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Arginosuc_synth HSJS2_k127_35157_3 379066.GAU_0155 1.863e-107 376.0 COG0165@1|root,COG0165@2|Bacteria,1ZSM0@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Argininosuccinate lyase C-terminal argH - 4.3.2.1 ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 M00029,M00844,M00845 R01086 RC00445,RC00447 ko00000,ko00001,ko00002,ko01000,ko04147 - - - ASL_C2,Lyase_1 HSJS2_k127_3519806_1 861299.J421_3400 3.043e-95 331.0 COG0612@1|root,COG0612@2|Bacteria,1ZSPT@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Insulinase (Peptidase family M16) - - - - - - - - - - - - Peptidase_M16,Peptidase_M16_C HSJS2_k127_3519806_0 861299.J421_3401 3.203e-161 519.0 COG1185@1|root,COG1185@2|Bacteria,1ZT7C@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction pnp - 2.7.7.8 ko:K00962 ko00230,ko00240,ko03018,map00230,map00240,map03018 M00394 R00437,R00438,R00439,R00440 RC02795 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 - - - KH_1,PNPase,RNase_PH,RNase_PH_C,S1 HSJS2_k127_3521126_3 518766.Rmar_0276 2.304e-31 132.0 COG0705@1|root,COG0705@2|Bacteria,4NIYR@976|Bacteroidetes,1FJ6W@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes S Eukaryotic integral membrane protein (DUF1751) - - 3.4.21.105 ko:K09650 - - - - ko00000,ko01000,ko01002,ko03029 - - - Rhomboid HSJS2_k127_3521126_2 349521.HCH_06188 1.694e-95 324.0 COG1181@1|root,COG1181@2|Bacteria,1MUTB@1224|Proteobacteria,1RMTM@1236|Gammaproteobacteria,1XHNJ@135619|Oceanospirillales 135619|Oceanospirillales F Belongs to the D-alanine--D-alanine ligase family ddl - 6.3.2.4 ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 - R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Dala_Dala_lig_C,Dala_Dala_lig_N HSJS2_k127_3521126_1 861299.J421_0897 6.46e-141 454.0 COG0031@1|root,COG0031@2|Bacteria,1ZTA6@142182|Gemmatimonadetes 142182|Gemmatimonadetes EK Domain in cystathionine beta-synthase and other proteins. - - 4.2.1.22 ko:K01697 ko00260,ko00270,ko01100,ko01130,ko01230,map00260,map00270,map01100,map01130,map01230 M00035,M00338 R00891,R01290,R04942 RC00056,RC00069,RC00256,RC00489,RC01246 ko00000,ko00001,ko00002,ko01000 - - - CBS,PALP HSJS2_k127_3521126_4 1183438.GKIL_1574 6.615e-07 59.0 COG0810@1|root,COG0810@2|Bacteria,1G6FF@1117|Cyanobacteria 1117|Cyanobacteria M TIGRFAM TonB family C-terminal domain - - - ko:K03832 - - - - ko00000,ko02000 2.C.1.1 - - TonB_C HSJS2_k127_3521126_0 861299.J421_0903 7.826e-143 466.0 COG0249@1|root,COG0249@2|Bacteria,1ZST5@142182|Gemmatimonadetes 142182|Gemmatimonadetes L that it carries out the mismatch recognition step. This protein has a weak ATPase activity mutS - - ko:K03555 ko03430,map03430 - - - ko00000,ko00001,ko03400 - - - MutS_I,MutS_II,MutS_III,MutS_IV,MutS_V HSJS2_k127_3553713_0 518766.Rmar_1790 3.764e-51 189.0 COG1228@1|root,COG1228@2|Bacteria,4NEV0@976|Bacteroidetes 976|Bacteroidetes Q Pfam Amidohydrolase - - - - - - - - - - - - Amidohydro_1 HSJS2_k127_3553713_2 309807.SRU_2758 1.849e-15 85.0 COG0296@1|root,COG0296@2|Bacteria 2|Bacteria G 1,4-alpha-glucan branching enzyme activity - - 2.4.1.18 ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 M00565 R02110 - ko00000,ko00001,ko00002,ko01000,ko04147 - CBM48,GH13 - AMPK1_CBM,Alpha-amylase,Alpha-amylase_C,CBM_48 HSJS2_k127_3553713_3 1111069.TCCBUS3UF1_17410 3.399e-05 57.0 COG0366@1|root,COG0366@2|Bacteria,1WIC6@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus G Alpha-amylase domain - - 3.2.1.133,3.2.1.135,3.2.1.54 ko:K01208 ko00500,ko01100,map00500,map01100 - R02112,R03122,R11262 - ko00000,ko00001,ko01000 - GH13 - AMPK1_CBM,Alpha-amylase HSJS2_k127_3553713_1 861299.J421_4541 4.295e-29 123.0 COG1595@1|root,COG1595@2|Bacteria 2|Bacteria K DNA-templated transcription, initiation sigX - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4,Sigma70_r4_2 HSJS2_k127_3553713_4 1229203.KI301992_gene2005 0.000686 44.0 COG0405@1|root,COG0405@2|Bacteria,2GJYW@201174|Actinobacteria,3UXIB@52018|unclassified Actinobacteria (class) 201174|Actinobacteria E Gamma-glutamyltranspeptidase ggt - 2.3.2.2,3.4.19.13 ko:K00681 ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100 - R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935 RC00064,RC00090,RC00096 ko00000,ko00001,ko01000,ko01002 - - - G_glu_transpept HSJS2_k127_359979_0 1123368.AUIS01000004_gene185 5.109e-59 213.0 COG0384@1|root,COG0384@2|Bacteria,1R9X4@1224|Proteobacteria,1RZ0R@1236|Gammaproteobacteria,2NCTG@225057|Acidithiobacillales 225057|Acidithiobacillales S Phenazine biosynthesis-like protein - - - - - - - - - - - - PhzC-PhzF HSJS2_k127_359979_1 443143.GM18_1507 8.545e-51 190.0 COG3842@1|root,COG3842@2|Bacteria,1MU3I@1224|Proteobacteria,42S6I@68525|delta/epsilon subdivisions,2WNNW@28221|Deltaproteobacteria 28221|Deltaproteobacteria P TOBE domain - - 3.6.3.29,3.6.3.55 ko:K02017,ko:K06857 ko02010,map02010 M00186,M00189 R10531 RC00002 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.6.2,3.A.1.6.4,3.A.1.8 - - ABC_tran,TOBE HSJS2_k127_3608118_0 861299.J421_1696 7.132e-92 313.0 COG2866@1|root,COG2866@2|Bacteria,1ZUNB@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Zinc carboxypeptidase - - - - - - - - - - - - Peptidase_M14 HSJS2_k127_3608118_1 1283300.ATXB01000001_gene988 3.631e-59 223.0 COG0647@1|root,COG0647@2|Bacteria,1QGX4@1224|Proteobacteria,1RRS1@1236|Gammaproteobacteria,1XEHN@135618|Methylococcales 135618|Methylococcales G Haloacid dehalogenase-like hydrolase - - - - - - - - - - - - Hydrolase_6,Hydrolase_like HSJS2_k127_3608118_2 1232410.KI421416_gene2600 1.074e-33 139.0 COG4198@1|root,COG4198@2|Bacteria,1NPPY@1224|Proteobacteria,42NTB@68525|delta/epsilon subdivisions,2WKNX@28221|Deltaproteobacteria,43U98@69541|Desulfuromonadales 28221|Deltaproteobacteria S Protein of unknown function (DUF1015) - - - - - - - - - - - - DUF1015 HSJS2_k127_3612231_6 237727.NAP1_06560 3.96e-20 92.0 COG0331@1|root,COG0331@2|Bacteria,1MV6N@1224|Proteobacteria,2TRTT@28211|Alphaproteobacteria,2K15H@204457|Sphingomonadales 204457|Sphingomonadales I malonyl CoA-acyl carrier protein transacylase fabD - 2.3.1.39 ko:K00645 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 M00082 R01626,R11671 RC00004,RC00039,RC02727 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Acyl_transf_1 HSJS2_k127_3612231_7 500635.MITSMUL_04540 9.104e-13 69.0 COG0333@1|root,COG0333@2|Bacteria,1VEFI@1239|Firmicutes,4H5MV@909932|Negativicutes 909932|Negativicutes J Belongs to the bacterial ribosomal protein bL32 family rpmF - - ko:K02911 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011,ko03029 - - - Ribosomal_L32p HSJS2_k127_3612231_5 1122918.KB907258_gene2651 3.445e-20 100.0 COG1399@1|root,COG1399@2|Bacteria,1VEXU@1239|Firmicutes,4HM44@91061|Bacilli,26UF3@186822|Paenibacillaceae 91061|Bacilli S metal-binding, possibly nucleic acid-binding protein - - - ko:K07040 - - - - ko00000 - - - DUF177 HSJS2_k127_3612231_4 1379270.AUXF01000006_gene247 1.304e-52 189.0 COG0105@1|root,COG0105@2|Bacteria,1ZTTD@142182|Gemmatimonadetes 142182|Gemmatimonadetes F NDK - - 2.7.4.6 ko:K00940 ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016 M00049,M00050,M00052,M00053 R00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895 RC00002 ko00000,ko00001,ko00002,ko01000,ko04131 - - - NDK HSJS2_k127_3612231_1 1379270.AUXF01000006_gene246 3.293e-133 449.0 COG0074@1|root,COG0074@2|Bacteria,1ZT20@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit sucD - 6.2.1.5 ko:K01902 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00173,M00374,M00620 R00405,R02404 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000 - - - CoA_binding,Ligase_CoA HSJS2_k127_3612231_0 861299.J421_3279 1.014e-149 484.0 COG0045@1|root,COG0045@2|Bacteria,1ZSZ4@142182|Gemmatimonadetes 142182|Gemmatimonadetes F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit sucC - 6.2.1.5 ko:K01903 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00173,M00374,M00620 R00405,R02404 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000 - - - ATP-grasp_2,Ligase_CoA HSJS2_k127_3612231_3 1379698.RBG1_1C00001G0473 3.303e-72 269.0 COG0549@1|root,COG0549@2|Bacteria,2NNKM@2323|unclassified Bacteria 2|Bacteria E Amino acid kinase family arcC GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008804,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019546,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.7.2.2 ko:K00926 ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200 - R00150,R01395 RC00002,RC00043,RC02803,RC02804 ko00000,ko00001,ko01000 - - iAPECO1_1312.APECO1_3652,iE2348C_1286.E2348C_0454,iECABU_c1320.ECABU_c31550,iECED1_1282.ECED1_0540,iECED1_1282.ECED1_3334,iECIAI39_1322.ECIAI39_3289,iECNA114_1301.ECNA114_2915,iECOK1_1307.ECOK1_3260,iECS88_1305.ECS88_3153,iECSF_1327.ECSF_2670,iECUMN_1333.ECUMN_0561,iEcE24377_1341.EcE24377A_0559,iG2583_1286.G2583_0641,iHN637.CLJU_RS13830,iJN746.PP_0999,iUMN146_1321.UM146_02150,iUTI89_1310.UTI89_C3259,ic_1306.c3452 AA_kinase HSJS2_k127_3612231_2 1123371.ATXH01000009_gene1104 3.541e-130 426.0 COG1109@1|root,COG1109@2|Bacteria,2GHQ7@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III - - 5.4.2.2,5.4.2.8 ko:K15778 ko00010,ko00030,ko00051,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 M00114 R00959,R01057,R01818,R08639 RC00408 ko00000,ko00001,ko00002,ko01000 - - - PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV HSJS2_k127_36205_2 525246.HMPREF0058_1391 1.911e-82 287.0 COG0436@1|root,COG0436@2|Bacteria,2GJ7R@201174|Actinobacteria,4D3AU@85005|Actinomycetales 201174|Actinobacteria E Aminotransferase aspC - 2.6.1.1 ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 - R00355,R00694,R00734,R00896,R02433,R02619,R05052 RC00006 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 HSJS2_k127_36205_6 379066.GAU_1674 9.742e-27 121.0 COG0776@1|root,COG0776@2|Bacteria,1ZTTN@142182|Gemmatimonadetes 142182|Gemmatimonadetes L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions - - - ko:K05788 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding HSJS2_k127_36205_4 671143.DAMO_1371 3.417e-52 196.0 COG0616@1|root,COG0616@2|Bacteria,2NPIE@2323|unclassified Bacteria 2|Bacteria OU Peptidase family S49 sppA - - ko:K04773 - - - - ko00000,ko01000,ko01002 - - - Peptidase_S49 HSJS2_k127_36205_0 1379270.AUXF01000006_gene216 8.776e-121 398.0 COG0505@1|root,COG0505@2|Bacteria,1ZT0T@142182|Gemmatimonadetes 142182|Gemmatimonadetes F Carbamoyl-phosphate synthase small chain, CPSase domain carA - 6.3.5.5 ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - - CPSase_sm_chain,GATase HSJS2_k127_36205_5 1379270.AUXF01000002_gene1806 2.985e-40 170.0 COG0328@1|root,COG0328@2|Bacteria,1ZTI8@142182|Gemmatimonadetes 142182|Gemmatimonadetes L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids - - 3.1.26.4 ko:K03469 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - RNase_H HSJS2_k127_36205_7 1379270.AUXF01000006_gene215 3.093e-18 89.0 COG1314@1|root,COG1314@2|Bacteria,1ZTZS@142182|Gemmatimonadetes 142182|Gemmatimonadetes U Preprotein translocase SecG subunit - - - ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 - - SecG HSJS2_k127_36205_3 379066.GAU_1677 2.974e-58 213.0 COG0149@1|root,COG0149@2|Bacteria,1ZSYN@142182|Gemmatimonadetes 142182|Gemmatimonadetes G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) tpiA - 5.3.1.1 ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003 R01015 RC00423 ko00000,ko00001,ko00002,ko01000,ko04147 - - - TIM HSJS2_k127_36205_1 379066.GAU_1678 5.76e-103 345.0 COG0126@1|root,COG0126@2|Bacteria,1ZT1B@142182|Gemmatimonadetes 142182|Gemmatimonadetes G Phosphoglycerate kinase pgk - 2.7.2.3 ko:K00927 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01512 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000,ko04147 - - - PGK HSJS2_k127_3621704_0 290397.Adeh_1417 3.551e-166 535.0 COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,42PMK@68525|delta/epsilon subdivisions,2X5G7@28221|Deltaproteobacteria,2Z35F@29|Myxococcales 28221|Deltaproteobacteria C Acyl-CoA dehydrogenase, N-terminal domain - - - - - - - - - - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N HSJS2_k127_3621704_9 1123253.AUBD01000008_gene509 2.457e-11 74.0 2ANYG@1|root,31H17@2|Bacteria,1QEQM@1224|Proteobacteria,1TBIW@1236|Gammaproteobacteria,1X94V@135614|Xanthomonadales 135614|Xanthomonadales - - - - - - - - - - - - - - - HSJS2_k127_3621704_2 266117.Rxyl_0687 1.624e-133 443.0 COG1262@1|root,COG1262@2|Bacteria,2GK9Q@201174|Actinobacteria,4CPQ7@84995|Rubrobacteria 84995|Rubrobacteria S DinB superfamily - - 1.14.99.50 ko:K18912 ko00340,map00340 - R11013 RC03323,RC03324 ko00000,ko00001,ko01000 - - - DinB_2,FGE-sulfatase HSJS2_k127_3621704_4 526225.Gobs_0202 2.1e-87 302.0 COG4301@1|root,COG4301@2|Bacteria,2GJAX@201174|Actinobacteria,4ERND@85013|Frankiales 201174|Actinobacteria S Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine egtD GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006547,GO:0006548,GO:0006575,GO:0006577,GO:0006578,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008213,GO:0008276,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009987,GO:0016020,GO:0016053,GO:0016054,GO:0016740,GO:0016741,GO:0019439,GO:0019538,GO:0019752,GO:0032259,GO:0034641,GO:0036211,GO:0042398,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0044464,GO:0046394,GO:0046395,GO:0046483,GO:0046700,GO:0052698,GO:0052699,GO:0052701,GO:0052703,GO:0052704,GO:0052707,GO:0052708,GO:0052709,GO:0052803,GO:0052805,GO:0071704,GO:0071944,GO:0097164,GO:0140096,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 2.1.1.44 ko:K18911 ko00340,map00340 - R01169 RC00003,RC02308 ko00000,ko00001,ko01000 - - - Methyltransf_33 HSJS2_k127_3621704_1 479434.Sthe_1947 1.395e-145 475.0 COG1282@1|root,COG1282@2|Bacteria,2GB8C@200795|Chloroflexi,27Y0C@189775|Thermomicrobia 189775|Thermomicrobia C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane - - 1.6.1.2 ko:K00325 ko00760,ko01100,map00760,map01100 - R00112 RC00001 ko00000,ko00001,ko01000 - - - PNTB HSJS2_k127_3621704_8 1173026.Glo7428_3012 2.258e-29 132.0 COG3288@1|root,COG3288@2|Bacteria,1G711@1117|Cyanobacteria 1117|Cyanobacteria C NAD(P) transhydrogenase, alpha subunit pntA-2 - 1.6.1.2 ko:K00324 ko00760,ko01100,map00760,map01100 - R00112 RC00001 ko00000,ko00001,ko01000 - - - PNTB_4TM HSJS2_k127_3621704_3 404589.Anae109_2971 1.393e-114 386.0 COG3288@1|root,COG3288@2|Bacteria,1MVXU@1224|Proteobacteria,42NHC@68525|delta/epsilon subdivisions,2WJQJ@28221|Deltaproteobacteria,2YUHD@29|Myxococcales 28221|Deltaproteobacteria C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane pntA - 1.6.1.2 ko:K00324 ko00760,ko01100,map00760,map01100 - R00112 RC00001 ko00000,ko00001,ko01000 - - - AlaDh_PNT_C,AlaDh_PNT_N,PNTB_4TM HSJS2_k127_3621704_6 861299.J421_5964 5.904e-37 147.0 28NN4@1|root,2ZBNJ@2|Bacteria,1ZTTM@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_3621704_7 861299.J421_2642 1.322e-29 131.0 COG1651@1|root,COG1651@2|Bacteria,1ZTVX@142182|Gemmatimonadetes 142182|Gemmatimonadetes O Thioredoxin - - - - - - - - - - - - Thioredoxin_4 HSJS2_k127_3621704_5 644966.Tmar_0337 5.5e-54 192.0 COG1225@1|root,COG1225@2|Bacteria,1V3N5@1239|Firmicutes,24HP8@186801|Clostridia,3WDA9@538999|Clostridiales incertae sedis 186801|Clostridia O Redoxin bcp - 1.11.1.15 ko:K03564 - - - - ko00000,ko01000 - - - AhpC-TSA HSJS2_k127_3623399_0 1089552.KI911559_gene662 1.005e-211 666.0 COG1866@1|root,COG1866@2|Bacteria,1MWXN@1224|Proteobacteria,2TRC4@28211|Alphaproteobacteria,2JQSD@204441|Rhodospirillales 204441|Rhodospirillales C Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA pckA - 4.1.1.49 ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 M00003,M00170 R00341 RC00002,RC02741 ko00000,ko00001,ko00002,ko01000 - - - PEPCK_ATP HSJS2_k127_3623399_1 243231.GSU2761 2.325e-158 506.0 COG0578@1|root,COG0578@2|Bacteria,1MUMY@1224|Proteobacteria,42N1B@68525|delta/epsilon subdivisions,2WJWS@28221|Deltaproteobacteria,43UDG@69541|Desulfuromonadales 28221|Deltaproteobacteria C PFAM FAD dependent oxidoreductase glpD - 1.1.5.3 ko:K00111 ko00564,ko01110,map00564,map01110 - R00848 RC00029 ko00000,ko00001,ko01000 - - - DAO,DAO_C HSJS2_k127_3625462_4 314260.PB2503_09364 1.265e-29 119.0 COG0346@1|root,COG0346@2|Bacteria,1RH8Z@1224|Proteobacteria,2U95P@28211|Alphaproteobacteria 28211|Alphaproteobacteria E glyoxalase bleomycin resistance protein dioxygenase - - - - - - - - - - - - Glyoxalase HSJS2_k127_3625462_5 1267534.KB906754_gene2679 3.952e-19 97.0 COG2823@1|root,COG2823@2|Bacteria,3Y3MJ@57723|Acidobacteria,2JIN1@204432|Acidobacteriia 204432|Acidobacteriia S BON domain - - - - - - - - - - - - BON HSJS2_k127_3625462_0 379066.GAU_0931 1.497e-162 538.0 COG1132@1|root,COG1132@2|Bacteria,1ZT5Y@142182|Gemmatimonadetes 142182|Gemmatimonadetes P ABC transporter transmembrane region - - - ko:K18889 ko02010,map02010 M00707 - - ko00000,ko00001,ko00002,ko02000 3.A.1.106.13,3.A.1.106.5 - - ABC_membrane,ABC_tran HSJS2_k127_3625462_1 379066.GAU_0930 3.216e-76 262.0 COG0785@1|root,COG0785@2|Bacteria,1ZTJC@142182|Gemmatimonadetes 142182|Gemmatimonadetes O Cytochrome C biogenesis protein transmembrane region - - - ko:K06196 - - - - ko00000,ko02000 5.A.1.2 - - DsbD HSJS2_k127_3625462_2 861299.J421_3916 3.515e-72 266.0 COG0618@1|root,COG0618@2|Bacteria,1ZSS0@142182|Gemmatimonadetes 142182|Gemmatimonadetes S DHH family - - 3.1.13.3,3.1.3.7 ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 - R00188,R00508 RC00078 ko00000,ko00001,ko01000,ko03400 - - - DHH,DHHA1 HSJS2_k127_3625462_3 525904.Tter_0400 1.593e-40 160.0 COG0613@1|root,COG0613@2|Bacteria 2|Bacteria Q PHP domain protein - - 3.1.3.97 ko:K07053 - - R00188,R11188 RC00078 ko00000,ko01000 - - - Glyco_trans_1_4,Glyco_transf_4,PHP,PHP_C HSJS2_k127_3633933_5 861299.J421_3967 2.824e-26 126.0 COG4974@1|root,COG4974@2|Bacteria,1ZT3T@142182|Gemmatimonadetes 142182|Gemmatimonadetes D Phage integrase, N-terminal SAM-like domain xerC - - ko:K03733 - - - - ko00000,ko03036 - - - Phage_int_SAM_1,Phage_integrase HSJS2_k127_3633933_0 65093.PCC7418_1146 5.341e-273 865.0 COG0550@1|root,COG1754@1|root,COG0550@2|Bacteria,COG1754@2|Bacteria,1G092@1117|Cyanobacteria 1117|Cyanobacteria L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone topA - 5.99.1.2 ko:K03168 - - - - ko00000,ko01000,ko03032,ko03400 - - - Topoisom_bac,Toprim,Toprim_C_rpt HSJS2_k127_3633933_6 166314.Syncc8109_2443 3.726e-26 123.0 COG0703@1|root,COG0703@2|Bacteria,1G5QW@1117|Cyanobacteria,1GYPN@1129|Synechococcus 1117|Cyanobacteria F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate aroK GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 ko:K00891 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02412 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - SKI HSJS2_k127_3633933_1 861299.J421_3974 2.15e-126 426.0 COG0082@1|root,COG0082@2|Bacteria,1ZT39@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system aroC - 4.2.3.5 ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R01714 RC00586 ko00000,ko00001,ko00002,ko01000 - - - Chorismate_synt HSJS2_k127_3633933_3 861299.J421_3976 7.24e-92 325.0 COG4796@1|root,COG4796@2|Bacteria,1ZSRT@142182|Gemmatimonadetes 142182|Gemmatimonadetes U AMIN domain - - - ko:K02666 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - AMIN,Secretin,Secretin_N HSJS2_k127_3633933_7 1379270.AUXF01000003_gene3396 3.476e-18 94.0 COG3167@1|root,COG3167@2|Bacteria,1ZTZ8@142182|Gemmatimonadetes 142182|Gemmatimonadetes NU Pilus assembly protein, PilO - - - ko:K02664 - - - - ko00000,ko02035,ko02044 - - - PilO HSJS2_k127_3633933_4 379066.GAU_2517 6.329e-33 136.0 COG3166@1|root,COG3166@2|Bacteria,1ZTR8@142182|Gemmatimonadetes 142182|Gemmatimonadetes NU Fimbrial assembly protein (PilN) - - - - - - - - - - - - PilN HSJS2_k127_3633933_2 861299.J421_3981 2.484e-108 361.0 COG4972@1|root,COG4972@2|Bacteria,1ZSYA@142182|Gemmatimonadetes 142182|Gemmatimonadetes NU Type IV pilus assembly protein PilM; - - - ko:K02662 - - - - ko00000,ko02035,ko02044 - - - PilM_2 HSJS2_k127_3633933_8 266264.Rmet_2687 0.0001999 50.0 COG4970@1|root,COG4970@2|Bacteria,1NNFJ@1224|Proteobacteria,2VY4H@28216|Betaproteobacteria,1K98D@119060|Burkholderiaceae 28216|Betaproteobacteria NU type IV pilus assembly protein FimT - - - ko:K08084 - - - - ko00000,ko02044 3.A.15.2 - - GspH,N_methyl HSJS2_k127_3635379_2 861299.J421_4357 2.409e-37 151.0 COG0577@1|root,COG0577@2|Bacteria,1ZURT@142182|Gemmatimonadetes 142182|Gemmatimonadetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD HSJS2_k127_3635379_1 861299.J421_4356 2.399e-67 246.0 COG1136@1|root,COG1136@2|Bacteria,1ZUKE@142182|Gemmatimonadetes 142182|Gemmatimonadetes V ABC transporter - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HSJS2_k127_3635379_0 861299.J421_4355 2.098e-106 374.0 2AETJ@1|root,314QN@2|Bacteria,1ZU8F@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_3635379_3 684949.ATTJ01000001_gene1661 2.912e-19 89.0 COG0535@1|root,COG0535@2|Bacteria,1WICG@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S PFAM Radical SAM superfamily - - - - - - - - - - - - Fer4_12,Radical_SAM,SPASM HSJS2_k127_3637257_0 234267.Acid_2224 6.293e-85 300.0 COG0624@1|root,COG0624@2|Bacteria,3Y7TX@57723|Acidobacteria 57723|Acidobacteria E Peptidase family M20/M25/M40 - - 3.5.1.16 ko:K01438 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028,M00845 R00669,R09107 RC00064,RC00300 ko00000,ko00001,ko00002,ko01000 - - - M20_dimer,Peptidase_M20,Peptidase_M28 HSJS2_k127_3637257_1 379066.GAU_1956 7.067e-57 208.0 COG2003@1|root,COG2003@2|Bacteria,1ZTFU@142182|Gemmatimonadetes 142182|Gemmatimonadetes E RadC-like JAB domain - - - ko:K03630 - - - - ko00000 - - - RadC HSJS2_k127_3637257_2 1123377.AUIV01000001_gene1007 4.994e-55 199.0 COG0454@1|root,COG0456@2|Bacteria,1RAJC@1224|Proteobacteria,1S1YW@1236|Gammaproteobacteria,1X6QN@135614|Xanthomonadales 135614|Xanthomonadales K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - ko:K03828 - - - - ko00000,ko01000 - - - Acetyltransf_1 HSJS2_k127_3642451_2 1267534.KB906756_gene406 5.053e-09 57.0 COG2120@1|root,COG2120@2|Bacteria,3Y3BV@57723|Acidobacteria,2JIKG@204432|Acidobacteriia 204432|Acidobacteriia S GlcNAc-PI de-N-acetylase - - - - - - - - - - - - NPCBM_assoc,PIG-L HSJS2_k127_3642451_0 379066.GAU_0394 2.025e-209 667.0 COG0591@1|root,COG0591@2|Bacteria,1ZT93@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Sodium:solute symporter family - - - - - - - - - - - - SSF HSJS2_k127_3642451_1 1397284.AYMN01000054_gene2828 1.531e-96 322.0 COG0667@1|root,COG0667@2|Bacteria,1MV2Y@1224|Proteobacteria,1RQ1X@1236|Gammaproteobacteria,4014X@613|Serratia 1236|Gammaproteobacteria C Aldo/keto reductase family mocA - - - - - - - - - - - Aldo_ket_red HSJS2_k127_3645828_4 357808.RoseRS_0824 9.2e-08 65.0 COG1807@1|root,COG1807@2|Bacteria 2|Bacteria M 4-amino-4-deoxy-L-arabinose transferase activity - - - ko:K14340 - - - - ko00000,ko01000,ko01003 - - - PMT_2 HSJS2_k127_3645828_2 1242864.D187_006518 2.601e-47 194.0 COG4485@1|root,COG4485@2|Bacteria,1NBM0@1224|Proteobacteria,42WPS@68525|delta/epsilon subdivisions,2X8PP@28221|Deltaproteobacteria 68525|delta/epsilon subdivisions S Bacterial membrane protein YfhO - - - - - - - - - - - - YfhO HSJS2_k127_3645828_3 56780.SYN_00814 9.356e-17 86.0 COG4969@1|root,COG4969@2|Bacteria,1QV9X@1224|Proteobacteria,42W4E@68525|delta/epsilon subdivisions,2X70G@28221|Deltaproteobacteria 28221|Deltaproteobacteria NU Prokaryotic N-terminal methylation motif - - - - - - - - - - - - N_methyl HSJS2_k127_3645828_0 379066.GAU_2525 1.472e-169 544.0 COG2204@1|root,COG2204@2|Bacteria,1ZSRQ@142182|Gemmatimonadetes 142182|Gemmatimonadetes T Bacterial regulatory protein, Fis family - - - - - - - - - - - - HTH_8,Response_reg,Sigma54_activat HSJS2_k127_3645828_1 1379270.AUXF01000003_gene3385 2.169e-74 280.0 COG3852@1|root,COG3852@2|Bacteria,1ZSYP@142182|Gemmatimonadetes 142182|Gemmatimonadetes T PAS domain - - 2.7.13.3 ko:K02668 ko02020,map02020 M00501 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035 - - - HATPase_c,HisKA HSJS2_k127_3645828_5 566466.NOR53_884 5.405e-06 57.0 2DUWV@1|root,33SRV@2|Bacteria,1QQST@1224|Proteobacteria,1SKRU@1236|Gammaproteobacteria,1J990@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria S TM2 domain - - - - - - - - - - - - TM2 HSJS2_k127_3666872_3 1123355.JHYO01000016_gene1912 4.958e-78 273.0 COG0733@1|root,COG0733@2|Bacteria,1MUZJ@1224|Proteobacteria,2TUE5@28211|Alphaproteobacteria,36ZHJ@31993|Methylocystaceae 28211|Alphaproteobacteria S Sodium:neurotransmitter symporter family - - - ko:K03308 - - - - ko00000 2.A.22.4,2.A.22.5 - - SNF HSJS2_k127_3666872_2 1121405.dsmv_0256 3.723e-105 353.0 COG0628@1|root,COG0628@2|Bacteria,1MVX7@1224|Proteobacteria,42N2T@68525|delta/epsilon subdivisions,2WMYV@28221|Deltaproteobacteria,2MI58@213118|Desulfobacterales 28221|Deltaproteobacteria S AI-2E family transporter - - - - - - - - - - - - AI-2E_transport HSJS2_k127_3666872_0 945713.IALB_0026 1.856e-173 554.0 COG1830@1|root,COG1830@2|Bacteria 2|Bacteria G lyase activity fbaB GO:0003674,GO:0003824,GO:0004332,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016829,GO:0016830,GO:0016832,GO:0042802,GO:0044424,GO:0044444,GO:0044464 4.1.2.13 ko:K11645 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00003 R01068,R01070,R01829,R02568 RC00438,RC00439,RC00603,RC00604 ko00000,ko00001,ko00002,ko01000 - - iETEC_1333.ETEC_2236,iSBO_1134.SBO_0918,iUMNK88_1353.UMNK88_2640 DeoC HSJS2_k127_3666872_1 1033730.CAHG01000014_gene1854 3.827e-144 481.0 COG0078@1|root,COG0078@2|Bacteria,2GJ6H@201174|Actinobacteria,4DPPU@85009|Propionibacteriales 201174|Actinobacteria E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline argF - 2.1.3.3 ko:K00611 ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230 M00029,M00844 R01398 RC00096 ko00000,ko00001,ko00002,ko01000 - - - OTCace,OTCace_N HSJS2_k127_3666872_4 309807.SRU_2357 9.638e-06 51.0 28I3N@1|root,2Z87C@2|Bacteria,4NE8P@976|Bacteroidetes,1FIUM@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes S Domain of unknown function (DUF4105) - - - - - - - - - - - - DUF4105 HSJS2_k127_3667225_0 861299.J421_3630 4.928e-61 230.0 COG0243@1|root,COG0437@1|root,COG0243@2|Bacteria,COG0437@2|Bacteria,1ZSRY@142182|Gemmatimonadetes 142182|Gemmatimonadetes C 4Fe-4S dicluster domain - - - ko:K00184 - - - - ko00000 5.A.3 - - Fer4_7,Molybdop_Fe4S4,Molybdopterin,Molydop_binding,TAT_signal HSJS2_k127_3667225_1 1184267.A11Q_1512 1.464e-37 150.0 COG3303@1|root,COG3303@2|Bacteria,1QY22@1224|Proteobacteria,43C9D@68525|delta/epsilon subdivisions,2MTWU@213481|Bdellovibrionales,2WQ1C@28221|Deltaproteobacteria 213481|Bdellovibrionales C Cytochrome c7 and related cytochrome c - - - - - - - - - - - - Cytochrome_C7 HSJS2_k127_3667244_1 504728.K649_14940 1.676e-114 386.0 COG0714@1|root,COG0714@2|Bacteria,1WKZZ@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S AAA domain (dynein-related subfamily) - - - - - - - - - - - - AAA_5 HSJS2_k127_3667244_3 525904.Tter_2232 4.583e-69 261.0 COG1319@1|root,COG1319@2|Bacteria,2NQP8@2323|unclassified Bacteria 2|Bacteria C CO dehydrogenase flavoprotein C-terminal domain - - 1.2.5.3 ko:K03519 - - R11168 RC02800 ko00000,ko01000 - - - CO_deh_flav_C,FAD_binding_5 HSJS2_k127_3667244_0 604331.AUHY01000089_gene2624 8.177e-315 981.0 COG1529@1|root,COG1529@2|Bacteria,1WKY4@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus C Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - 1.17.1.4,1.2.5.3 ko:K03520,ko:K11177 ko00230,ko01100,ko01120,map00230,map01100,map01120 M00546 R01768,R02103,R11168 RC00143,RC02800 ko00000,ko00001,ko00002,ko01000 - - - Ald_Xan_dh_C,Ald_Xan_dh_C2 HSJS2_k127_3667244_4 525904.Tter_2234 5.81e-67 240.0 COG2080@1|root,COG2080@2|Bacteria,2NPPX@2323|unclassified Bacteria 2|Bacteria C PFAM 2Fe-2S -binding coxS - 1.2.5.3,1.3.99.16 ko:K03518,ko:K07302 - - R11168 RC02800 ko00000,ko01000 - - - Fer2,Fer2_2 HSJS2_k127_3667244_5 189753.AXAS01000013_gene5785 2.432e-32 131.0 COG3427@1|root,COG3427@2|Bacteria,1RAHI@1224|Proteobacteria,2U5I0@28211|Alphaproteobacteria,3K67N@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria S Carbon monoxide dehydrogenase subunit G (CoxG) - - - ko:K09386 - - - - ko00000 - - - COXG HSJS2_k127_3667244_2 867845.KI911784_gene544 1.743e-97 334.0 COG3552@1|root,COG3552@2|Bacteria,2G5IW@200795|Chloroflexi,3769V@32061|Chloroflexia 32061|Chloroflexia S SMART von Willebrand factor, type A - - - ko:K07161 - - - - ko00000 - - - VWA_CoxE HSJS2_k127_3670701_0 880073.Calab_2466 2.248e-114 379.0 COG0714@1|root,COG0714@2|Bacteria,2NNMQ@2323|unclassified Bacteria 2|Bacteria S ATPase associated with various cellular moxR - - ko:K03924 - - - - ko00000,ko01000 - - - AAA_3 HSJS2_k127_3670701_4 1379270.AUXF01000005_gene779 4.893e-70 262.0 COG1721@1|root,COG1721@2|Bacteria,1ZSKR@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Protein of unknown function DUF58 - - - - - - - - - - - - DUF58 HSJS2_k127_3670701_6 309807.SRU_2572 2.553e-07 63.0 COG3088@1|root,COG3088@2|Bacteria 2|Bacteria O cytochrome complex assembly ccmH GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015035,GO:0015036,GO:0016020,GO:0016043,GO:0016491,GO:0016667,GO:0017003,GO:0017004,GO:0017006,GO:0018063,GO:0018193,GO:0018198,GO:0018378,GO:0019538,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071944,GO:0098552,GO:0098567,GO:1901564 - ko:K02200,ko:K04016,ko:K04017,ko:K04018 - - R05712 RC00176 ko00000 - - - CcmH HSJS2_k127_3670701_3 379066.GAU_1527 1.018e-70 262.0 COG2304@1|root,COG2304@2|Bacteria,1ZSVY@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Protein of unknown function (DUF1194) - - - ko:K07114 - - - - ko00000,ko02000 1.A.13.2.2,1.A.13.2.3 - - BatA,VWA HSJS2_k127_3670701_5 1203611.KB894543_gene1836 9.944e-25 121.0 COG2304@1|root,COG2304@2|Bacteria,4NF7Y@976|Bacteroidetes,2FN4B@200643|Bacteroidia,22U4Q@171550|Rikenellaceae 976|Bacteroidetes S Von Willebrand factor type A domain batB - - ko:K07114 - - - - ko00000,ko02000 1.A.13.2.2,1.A.13.2.3 - - BatA,VWA,VWA_2 HSJS2_k127_3670701_7 861299.J421_3153 3.918e-05 55.0 COG2304@1|root,COG2304@2|Bacteria,1ZTCZ@142182|Gemmatimonadetes 142182|Gemmatimonadetes S von Willebrand factor type A domain - - - ko:K07114 - - - - ko00000,ko02000 1.A.13.2.2,1.A.13.2.3 - - VWA_2 HSJS2_k127_3670701_2 1235279.C772_01930 2.369e-83 287.0 COG0709@1|root,COG0709@2|Bacteria,1TQCJ@1239|Firmicutes,4HB6P@91061|Bacilli,26DSS@186818|Planococcaceae 91061|Bacilli E Synthesizes selenophosphate from selenide and ATP selD - 2.7.9.3 ko:K01008 ko00450,ko01100,map00450,map01100 - R03595 RC00002,RC02878 ko00000,ko00001,ko01000,ko03016 - - - AIRS,AIRS_C HSJS2_k127_3670701_1 379066.GAU_3928 1.165e-83 284.0 COG0035@1|root,COG0035@2|Bacteria,1ZT1C@142182|Gemmatimonadetes 142182|Gemmatimonadetes F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate upp - 2.4.2.9 ko:K00761 ko00240,ko01100,map00240,map01100 - R00966 RC00063 ko00000,ko00001,ko01000 - - - UPRTase HSJS2_k127_3676147_1 861299.J421_3130 1.615e-12 76.0 COG2010@1|root,COG2010@2|Bacteria,1ZT9T@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Cytochrome c - - - - - - - - - - - - - HSJS2_k127_3676147_0 292459.STH1929 1.219e-47 185.0 COG0614@1|root,COG0614@2|Bacteria,1UNE3@1239|Firmicutes,24AKE@186801|Clostridia 186801|Clostridia P PFAM periplasmic binding protein - - - ko:K02016 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14 - - Peripla_BP_2 HSJS2_k127_3681068_3 1049564.TevJSym_ac00650 1.511e-30 127.0 COG0589@1|root,COG0589@2|Bacteria 2|Bacteria T AMP binding - - - - - - - - - - - - Usp HSJS2_k127_3681068_0 886293.Sinac_4912 1.17e-137 454.0 COG1533@1|root,COG1533@2|Bacteria,2IX0U@203682|Planctomycetes 203682|Planctomycetes L Radical SAM - - - - - - - - - - - - Radical_SAM HSJS2_k127_3681068_1 1157708.KB907450_gene6246 1.485e-53 191.0 COG3189@1|root,COG3189@2|Bacteria,1RHYB@1224|Proteobacteria,2VSIB@28216|Betaproteobacteria,4AECV@80864|Comamonadaceae 28216|Betaproteobacteria S Protein of unknown function, DUF488 - - - - - - - - - - - - DUF488 HSJS2_k127_3681068_2 765911.Thivi_0476 6.595e-34 137.0 COG1125@1|root,COG1125@2|Bacteria,1QTUC@1224|Proteobacteria,1RQWQ@1236|Gammaproteobacteria,1WXWK@135613|Chromatiales 135613|Chromatiales E pfam abc - - - ko:K05847 ko02010,map02010 M00209 - - ko00000,ko00001,ko00002,ko02000 3.A.1.12 - - ABC_tran HSJS2_k127_3684596_0 379066.GAU_1554 2.44e-146 471.0 COG0195@1|root,COG0195@2|Bacteria,1ZSNN@142182|Gemmatimonadetes 142182|Gemmatimonadetes K Participates in both transcription termination and antitermination nusA - - ko:K02600 - - - - ko00000,ko03009,ko03021 - - - HHH_5,KH_5,NusA_N HSJS2_k127_3684596_1 187272.Mlg_1950 5.886e-27 117.0 COG0779@1|root,COG0779@2|Bacteria,1RDP2@1224|Proteobacteria,1S3Y7@1236|Gammaproteobacteria,1WY8Z@135613|Chromatiales 135613|Chromatiales S Required for maturation of 30S ribosomal subunits rimP - - ko:K09748 - - - - ko00000,ko03009 - - - DUF150,DUF150_C HSJS2_k127_3684596_2 379066.GAU_1552 7.044e-08 56.0 COG1496@1|root,COG1496@2|Bacteria,1ZTTT@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Multi-copper polyphenol oxidoreductase laccase - - - ko:K05810 - - - - ko00000,ko01000 - - - Cu-oxidase_4 HSJS2_k127_3684823_2 1392489.JPOL01000002_gene936 1.412e-20 98.0 COG0101@1|root,COG0101@2|Bacteria,4NFDC@976|Bacteroidetes,1HWVP@117743|Flavobacteriia,2XITN@283735|Leeuwenhoekiella 976|Bacteroidetes J tRNA pseudouridine synthase truA GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 ko:K06173 - - - - ko00000,ko01000,ko03016 - - - PseudoU_synth_1 HSJS2_k127_3684823_1 379066.GAU_1730 3.513e-88 310.0 COG0265@1|root,COG0265@2|Bacteria,1ZTAM@142182|Gemmatimonadetes 142182|Gemmatimonadetes O Trypsin - - 3.4.21.107 ko:K04771 ko01503,ko02020,map01503,map02020 M00728 - - ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 - - - PDZ_2,Trypsin_2 HSJS2_k127_3684823_0 379066.GAU_1731 2.65e-147 481.0 COG0015@1|root,COG0015@2|Bacteria,1ZSVW@142182|Gemmatimonadetes 142182|Gemmatimonadetes F Adenylosuccinate lyase C-terminus - - 4.3.2.2 ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048,M00049 R01083,R04559 RC00379,RC00444,RC00445 ko00000,ko00001,ko00002,ko01000 - - - ADSL_C,Lyase_1 HSJS2_k127_3698889_0 388413.ALPR1_00675 2.603e-109 357.0 COG5276@1|root,COG5276@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - Big_2,DUF1566,LVIVD,Pec_lyase_C,Pectinesterase HSJS2_k127_3698889_1 388413.ALPR1_00680 1.19e-100 342.0 COG3391@1|root,COG3391@2|Bacteria 2|Bacteria CO amine dehydrogenase activity - - - - - - - - - - - - Cu_amine_oxidN1,Phytase-like HSJS2_k127_3698889_2 158189.SpiBuddy_0659 1.271e-43 169.0 COG0634@1|root,COG0634@2|Bacteria,2J8PE@203691|Spirochaetes 203691|Spirochaetes F Belongs to the purine pyrimidine phosphoribosyltransferase family hpt - 2.4.2.8 ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 - R00190,R01132,R01229,R02142,R08237,R08238,R08245 RC00063,RC00122 ko00000,ko00001,ko01000 - - - Pribosyltran HSJS2_k127_3716118_0 1379270.AUXF01000004_gene3094 7.404e-134 444.0 COG1022@1|root,COG1022@2|Bacteria,1ZT60@142182|Gemmatimonadetes 142182|Gemmatimonadetes I AMP-binding enzyme - - 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding HSJS2_k127_3716118_1 290397.Adeh_1133 1.375e-30 123.0 COG1324@1|root,COG1324@2|Bacteria,1N6TN@1224|Proteobacteria,42VE1@68525|delta/epsilon subdivisions,2WR7D@28221|Deltaproteobacteria,2Z0IS@29|Myxococcales 28221|Deltaproteobacteria P CutA1 divalent ion tolerance protein cutA - - ko:K03926 - - - - ko00000 - - - CutA1 HSJS2_k127_3716118_2 526222.Desal_3201 3.36e-13 78.0 COG0457@1|root,COG0457@2|Bacteria,1NNJ6@1224|Proteobacteria,42PBD@68525|delta/epsilon subdivisions,2WKWJ@28221|Deltaproteobacteria,2M91R@213115|Desulfovibrionales 28221|Deltaproteobacteria S Tetratricopeptide repeat - - - - - - - - - - - - PMT_2,TPR_1,TPR_11,TPR_16,TPR_17,TPR_2,TPR_8 HSJS2_k127_3718000_2 714943.Mucpa_4857 2.652e-79 275.0 COG0345@1|root,COG0345@2|Bacteria,4NE6F@976|Bacteroidetes,1IR2E@117747|Sphingobacteriia 976|Bacteroidetes E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline proC - 1.5.1.2 ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 M00015 R01248,R01251,R03291,R03293 RC00054,RC00083 ko00000,ko00001,ko00002,ko01000 - - - F420_oxidored,P5CR_dimer HSJS2_k127_3718000_1 880073.Calab_3557 2.596e-119 405.0 COG1215@1|root,COG1215@2|Bacteria,2NQN3@2323|unclassified Bacteria 2|Bacteria M transferase activity, transferring glycosyl groups - - - - - - - - - - - - Glyco_tranf_2_4,Glycos_transf_2 HSJS2_k127_3718000_5 35754.JNYJ01000039_gene10004 8.212e-41 160.0 COG1504@1|root,COG1504@2|Bacteria,2IRTB@201174|Actinobacteria,4DE4J@85008|Micromonosporales 201174|Actinobacteria S Protein of unknown function (DUF498/DUF598) - - - - - - - - - - - - DUF498 HSJS2_k127_3718000_3 502025.Hoch_4422 1.292e-78 267.0 COG0221@1|root,COG0221@2|Bacteria,1RA2F@1224|Proteobacteria,43B5T@68525|delta/epsilon subdivisions,2X6JE@28221|Deltaproteobacteria,2Z3BD@29|Myxococcales 28221|Deltaproteobacteria C Inorganic pyrophosphatase - - 3.6.1.1 ko:K01507 ko00190,map00190 - - - ko00000,ko00001,ko01000 - - - Pyrophosphatase HSJS2_k127_3718000_4 309801.trd_0578 2.853e-67 235.0 COG2080@1|root,COG2080@2|Bacteria,2GBQV@200795|Chloroflexi,27Y9S@189775|Thermomicrobia 189775|Thermomicrobia C [2Fe-2S] binding domain - - 1.2.5.3 ko:K03518 - - R11168 RC02800 ko00000,ko01000 - - - Fer2,Fer2_2 HSJS2_k127_3718000_0 1038860.AXAP01000027_gene1889 3.365e-317 997.0 COG1529@1|root,COG1529@2|Bacteria,1MUEA@1224|Proteobacteria,2TQMW@28211|Alphaproteobacteria,3JSZE@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria C Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - 1.2.5.3 ko:K03520 - - R11168 RC02800 ko00000,ko01000 - - - Ald_Xan_dh_C,Ald_Xan_dh_C2 HSJS2_k127_3732020_2 1385511.N783_05060 2.064e-05 51.0 COG0612@1|root,COG0612@2|Bacteria,1TP5I@1239|Firmicutes,4HBBF@91061|Bacilli,2Y94T@289201|Pontibacillus 91061|Bacilli O Belongs to the peptidase M16 family mlpA - - - - - - - - - - - Peptidase_M16,Peptidase_M16_C HSJS2_k127_3732020_1 861299.J421_3399 7.705e-159 510.0 COG0686@1|root,COG0686@2|Bacteria,1ZSSE@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Alanine dehydrogenase/PNT, N-terminal domain - - 1.4.1.1 ko:K00259 ko00250,ko00430,ko01100,map00250,map00430,map01100 - R00396 RC00008 ko00000,ko00001,ko01000 - - - AlaDh_PNT_C,AlaDh_PNT_N HSJS2_k127_3732020_0 861299.J421_3398 4.351e-162 516.0 COG1077@1|root,COG1077@2|Bacteria,1ZT9B@142182|Gemmatimonadetes 142182|Gemmatimonadetes D Hsp70 protein - - - ko:K03569 - - - - ko00000,ko02048,ko03036,ko04812 1.A.33.1,9.B.157.1 - - MreB_Mbl HSJS2_k127_3775500_4 234267.Acid_6493 2.944e-11 69.0 COG4319@1|root,COG4319@2|Bacteria,3Y5BE@57723|Acidobacteria 57723|Acidobacteria S Domain of unknown function (DUF4440) - - - - - - - - - - - - DUF4440,SnoaL_3 HSJS2_k127_3775500_2 1158338.JNLJ01000001_gene1054 4.096e-23 109.0 COG2151@1|root,COG2151@2|Bacteria 2|Bacteria L metal-sulfur cluster biosynthetic enzyme yitW - - ko:K02612 ko00360,ko01120,map00360,map01120 - R09838 RC02690 ko00000,ko00001 - - - FeS_assembly_P HSJS2_k127_3775500_3 448385.sce2888 1.591e-20 96.0 COG3030@1|root,COG3030@2|Bacteria,1MZJJ@1224|Proteobacteria,42VMT@68525|delta/epsilon subdivisions,2WPFB@28221|Deltaproteobacteria,2YVIK@29|Myxococcales 28221|Deltaproteobacteria S FxsA cytoplasmic membrane protein fsxA - - ko:K07113 - - - - ko00000 - - - FxsA HSJS2_k127_3775500_1 1089546.AQUI01000002_gene367 2.762e-24 108.0 COG2259@1|root,COG2259@2|Bacteria,2IQ5C@201174|Actinobacteria,4099R@622450|Actinopolysporales 201174|Actinobacteria S DoxX - - - ko:K15977 - - - - ko00000 - - - DoxX HSJS2_k127_3775500_0 1379698.RBG1_1C00001G0796 1.1e-29 129.0 COG1956@1|root,COG1956@2|Bacteria 2|Bacteria T GAF domain-containing protein yebR - 1.8.4.14 ko:K08968 ko00270,map00270 - R02025 RC00639 ko00000,ko00001,ko01000 - - - GAF,GAF_2 HSJS2_k127_378164_1 880073.Calab_1667 1.633e-47 189.0 COG1757@1|root,COG1757@2|Bacteria,2NPD8@2323|unclassified Bacteria 2|Bacteria C Na+/H+ antiporter family nhaC - - - - - - - - - - - Na_H_antiporter HSJS2_k127_378164_0 861299.J421_3141 2.106e-51 188.0 COG2065@1|root,COG2065@2|Bacteria,1ZTHG@142182|Gemmatimonadetes 142182|Gemmatimonadetes F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant pyrR - 2.4.2.9 ko:K02825 ko00240,ko01100,map00240,map01100 - R00966 RC00063 ko00000,ko00001,ko01000,ko03000 - - - Pribosyltran HSJS2_k127_3789768_0 469383.Cwoe_2550 5.349e-267 848.0 COG0068@1|root,COG0068@2|Bacteria,2GJYF@201174|Actinobacteria 201174|Actinobacteria O Belongs to the carbamoyltransferase HypF family hypF - - ko:K04656 - - - - ko00000 - - - Acylphosphatase,Sua5_yciO_yrdC,zf-HYPF HSJS2_k127_3791760_0 502025.Hoch_5025 1.862e-52 205.0 COG1752@1|root,COG1752@2|Bacteria,1R876@1224|Proteobacteria 1224|Proteobacteria S Patatin-like phospholipase - - - - - - - - - - - - Patatin HSJS2_k127_3799185_7 379066.GAU_1719 8.135e-25 116.0 COG1713@1|root,COG1713@2|Bacteria,1ZTTH@142182|Gemmatimonadetes 142182|Gemmatimonadetes H HD superfamily hydrolase involved in NAD metabolism - - 2.7.6.3 ko:K00950 ko00790,ko01100,map00790,map01100 M00126,M00841 R03503 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - - HSJS2_k127_3799185_8 309807.SRU_2547 1.485e-11 75.0 COG1316@1|root,COG1316@2|Bacteria,4P5Q5@976|Bacteroidetes,1FJHX@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes K LytR cell envelope-related transcriptional attenuator - - - - - - - - - - - - LytR_C HSJS2_k127_3799185_3 479434.Sthe_1821 6.123e-82 286.0 COG0820@1|root,COG0820@2|Bacteria,2G5SD@200795|Chloroflexi,27XRH@189775|Thermomicrobia 189775|Thermomicrobia J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs rlmN - 2.1.1.192 ko:K06941 - - - - ko00000,ko01000,ko03009 - - - Radical_SAM HSJS2_k127_3799185_0 861299.J421_3356 1.106e-184 599.0 COG0173@1|root,COG0173@2|Bacteria,1ZTFX@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) aspS - 6.1.1.12 ko:K01876 ko00970,map00970 M00359,M00360 R05577 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - GAD,tRNA-synt_2,tRNA_anti-codon HSJS2_k127_3799185_2 861299.J421_3355 1.918e-112 373.0 COG1702@1|root,COG1702@2|Bacteria,1ZSSD@142182|Gemmatimonadetes 142182|Gemmatimonadetes T PhoH-like protein - - - ko:K06217 - - - - ko00000 - - - PhoH HSJS2_k127_3799185_1 861299.J421_3354 6.274e-125 429.0 COG1480@1|root,COG1480@2|Bacteria 2|Bacteria O 7TM receptor with intracellular HD hydrolase yqfF - - ko:K07037 - - - - ko00000 - - - 7TM-7TMR_HD,7TMR-HDED,HD HSJS2_k127_3799185_6 861299.J421_3353 4.64e-26 112.0 COG0319@1|root,COG0319@2|Bacteria,1ZTUP@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA ybeY - - ko:K07042 - - - - ko00000,ko03009 - - - UPF0054 HSJS2_k127_3799185_5 477974.Daud_1152 6.371e-39 154.0 COG2928@1|root,COG2928@2|Bacteria,1V6FM@1239|Firmicutes,24JQ1@186801|Clostridia 186801|Clostridia S Protein of unknown function (DUF502) - - - - - - - - - - - - DUF502 HSJS2_k127_3799185_4 391596.PBAL39_02197 1.8e-42 165.0 COG2239@1|root,COG2239@2|Bacteria,4NGGN@976|Bacteroidetes,1IPNC@117747|Sphingobacteriia 976|Bacteroidetes P Acts as a magnesium transporter - - - ko:K06213 - - - - ko00000,ko02000 1.A.26.1 - - CBS,MgtE,MgtE_N HSJS2_k127_3802436_3 1040989.AWZU01000007_gene688 5.437e-37 141.0 COG1529@1|root,COG1529@2|Bacteria,1MUEA@1224|Proteobacteria,2TQMW@28211|Alphaproteobacteria,3JSZE@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria C Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - 1.2.5.3 ko:K03520 - - R11168 RC02800 ko00000,ko01000 - - - Ald_Xan_dh_C,Ald_Xan_dh_C2 HSJS2_k127_3802436_2 675635.Psed_2561 7.954e-75 265.0 COG1319@1|root,COG1319@2|Bacteria,2GT14@201174|Actinobacteria,4EAYW@85010|Pseudonocardiales 201174|Actinobacteria C CO dehydrogenase flavoprotein C-terminal domain - - 1.2.5.3 ko:K03519 - - R11168 RC02800 ko00000,ko01000 - - - CO_deh_flav_C,FAD_binding_5 HSJS2_k127_3802436_1 1254432.SCE1572_37890 1.276e-145 492.0 COG1953@1|root,COG1953@2|Bacteria,1MV18@1224|Proteobacteria,42X2Z@68525|delta/epsilon subdivisions,2WTRX@28221|Deltaproteobacteria,2YTSH@29|Myxococcales 28221|Deltaproteobacteria FH Permease for cytosine/purines, uracil, thiamine, allantoin - - - ko:K03457 - - - - ko00000 2.A.39 - - Transp_cyt_pur HSJS2_k127_3802436_0 1469607.KK073768_gene902 6.125e-168 554.0 COG0318@1|root,COG0318@2|Bacteria,1G2H0@1117|Cyanobacteria,1HQNE@1161|Nostocales 1117|Cyanobacteria IQ AMP-binding enzyme C-terminal domain - - - ko:K00666,ko:K18660 ko00280,map00280 - R03383 RC00004,RC00137 ko00000,ko00001,ko01000,ko01004 - - - AMP-binding,AMP-binding_C HSJS2_k127_3802436_4 1267533.KB906740_gene140 3.57e-35 146.0 COG2706@1|root,COG2706@2|Bacteria 2|Bacteria G 6-phosphogluconolactonase activity - - - - - - - - - - - - FG-GAP,VCBS HSJS2_k127_3812832_7 195522.BD01_1916 9.393e-07 58.0 COG0467@1|root,arCOG01171@2157|Archaea,2XTXF@28890|Euryarchaeota,243GB@183968|Thermococci 183968|Thermococci T KaiC - - - - - - - - - - - - ATPase HSJS2_k127_3812832_0 1089550.ATTH01000001_gene2023 1.41e-194 623.0 COG3104@1|root,COG3104@2|Bacteria,4NE8R@976|Bacteroidetes,1FJQN@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes E POT family - - - ko:K03305 - - - - ko00000 2.A.17 - - PTR2 HSJS2_k127_3812832_3 1496688.ER33_06020 3.389e-76 269.0 COG0438@1|root,COG0438@2|Bacteria,1GIW7@1117|Cyanobacteria,22T9Z@167375|Cyanobium 1117|Cyanobacteria M Glycosyltransferase Family 4 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 HSJS2_k127_3812832_6 237368.SCABRO_00501 1.363e-38 148.0 COG2154@1|root,COG2154@2|Bacteria,2J0CT@203682|Planctomycetes 203682|Planctomycetes H PFAM Pterin 4 alpha carbinolamine dehydratase - - 4.2.1.96 ko:K01724 ko00790,map00790 - R04734 RC01208 ko00000,ko00001,ko01000,ko04147 - - - Pterin_4a HSJS2_k127_3812832_5 204669.Acid345_4523 8.129e-59 224.0 COG2199@1|root,COG2203@1|root,COG2203@2|Bacteria,COG3706@2|Bacteria,3Y6D3@57723|Acidobacteria,2JKGW@204432|Acidobacteriia 2|Bacteria T diguanylate cyclase - - - - - - - - - - - - GAF,GAF_2,GGDEF,PAS_4,SpoIIE HSJS2_k127_3812832_2 1242864.D187_008090 1.314e-93 323.0 COG0265@1|root,COG0823@1|root,COG2234@1|root,COG0265@2|Bacteria,COG0823@2|Bacteria,COG2234@2|Bacteria,1MV86@1224|Proteobacteria,42Z17@68525|delta/epsilon subdivisions,2WURE@28221|Deltaproteobacteria,2YUPJ@29|Myxococcales 28221|Deltaproteobacteria O Peptidase family M28 - - - - - - - - - - - - PA,PD40,PDZ_2,Peptidase_M28 HSJS2_k127_3812832_1 330214.NIDE3501 1.126e-150 508.0 COG4907@1|root,COG4907@2|Bacteria 2|Bacteria P membrane protein (DUF2207) yciQ GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - - - - - - - - - - DUF2207 HSJS2_k127_3812832_4 330214.NIDE3500 6.667e-60 216.0 COG1704@1|root,COG1704@2|Bacteria 2|Bacteria S LemA family lemA - - ko:K03744 - - - - ko00000 - - - LemA HSJS2_k127_3812832_8 1410619.SRDD_23760 1.675e-05 50.0 COG0429@1|root,COG0429@2|Bacteria,1MWV1@1224|Proteobacteria,1RN39@1236|Gammaproteobacteria,401NG@613|Serratia 1236|Gammaproteobacteria S Hydrolase yheT GO:0003674,GO:0003824,GO:0006629,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0044237,GO:0044238,GO:0044255,GO:0050526,GO:0052689,GO:0071704 - ko:K07019 - - - - ko00000 - - - Abhydrolase_1 HSJS2_k127_3814845_0 1089550.ATTH01000001_gene534 1.541e-175 568.0 COG0471@1|root,COG0471@2|Bacteria,4NF52@976|Bacteroidetes,1FIP9@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes P Sodium:sulfate symporter transmembrane region - - - - - - - - - - - - CitMHS,TrkA_C HSJS2_k127_3814845_1 797302.Halru_0059 1.826e-11 73.0 COG5530@1|root,arCOG08962@2157|Archaea,2XTAU@28890|Euryarchaeota,23T0R@183963|Halobacteria 183963|Halobacteria S integral membrane protein - - - - - - - - - - - - DUF2270 HSJS2_k127_3831253_0 379066.GAU_1938 2.589e-23 111.0 COG1452@1|root,COG1452@2|Bacteria,1ZT14@142182|Gemmatimonadetes 142182|Gemmatimonadetes M involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane - - - - - - - - - - - - - HSJS2_k127_3831253_1 1379270.AUXF01000006_gene26 6.31e-21 107.0 COG0457@1|root,COG0457@2|Bacteria,1ZU0J@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_16,TPR_8 HSJS2_k127_383308_1 518766.Rmar_1770 2.802e-21 98.0 COG1131@1|root,COG1131@2|Bacteria,4NEH0@976|Bacteroidetes,1FJR1@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes P ABC transporter gldA - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran HSJS2_k127_383308_0 1177179.A11A3_07023 1.873e-53 211.0 COG1277@1|root,COG3225@1|root,COG1277@2|Bacteria,COG3225@2|Bacteria,1NZZ9@1224|Proteobacteria,1RP6C@1236|Gammaproteobacteria,1XNME@135619|Oceanospirillales 135619|Oceanospirillales N ABC-type transport system involved in multi-copper enzyme maturation, permease component - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_2,ABC_transp_aux HSJS2_k127_3838523_10 880072.Desac_2275 2.508e-15 77.0 COG0227@1|root,COG0227@2|Bacteria,1PTFN@1224|Proteobacteria,42V1S@68525|delta/epsilon subdivisions,2WR85@28221|Deltaproteobacteria,2MSC9@213462|Syntrophobacterales 28221|Deltaproteobacteria J Belongs to the bacterial ribosomal protein bL28 family rpmB GO:0003674,GO:0003735,GO:0005198 - ko:K02902 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L28 HSJS2_k127_3838523_6 1235835.C814_01734 4.959e-59 218.0 COG1089@1|root,COG1089@2|Bacteria,1UJFF@1239|Firmicutes,24818@186801|Clostridia,3WGYD@541000|Ruminococcaceae 186801|Clostridia M RmlD substrate binding domain - - 1.1.1.281 ko:K15856 ko00051,ko00520,map00051,map00520 - R03397,R03399 RC00182 ko00000,ko00001,ko01000 - - - GDP_Man_Dehyd HSJS2_k127_3838523_2 861299.J421_0144 1.614e-175 560.0 COG1004@1|root,COG1004@2|Bacteria,1ZTH3@142182|Gemmatimonadetes 2|Bacteria M UDP binding domain ugd - 1.1.1.22 ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 M00014,M00129,M00361,M00362 R00286 RC00291 ko00000,ko00001,ko00002,ko01000 - - - UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N HSJS2_k127_3838523_4 861299.J421_0145 1.219e-150 482.0 COG0451@1|root,COG0451@2|Bacteria,1ZUJJ@142182|Gemmatimonadetes 142182|Gemmatimonadetes GM 3-beta hydroxysteroid dehydrogenase/isomerase family - - 4.1.1.35,4.2.1.46 ko:K01710,ko:K08678 ko00520,ko00521,ko00523,ko00525,ko01055,ko01100,ko01130,map00520,map00521,map00523,map00525,map01055,map01100,map01130 M00361,M00793 R01384,R06513 RC00402,RC00508 ko00000,ko00001,ko00002,ko01000 - - - GDP_Man_Dehyd HSJS2_k127_3838523_5 1487953.JMKF01000065_gene4631 6.054e-87 300.0 COG1215@1|root,COG1215@2|Bacteria,1GHF8@1117|Cyanobacteria,1H7FV@1150|Oscillatoriales 1117|Cyanobacteria M Glycosyltransferase like family 2 - - - - - - - - - - - - Glycos_transf_2 HSJS2_k127_3838523_14 373994.Riv7116_0726 0.0001429 53.0 COG0457@1|root,COG0457@2|Bacteria,1G3AN@1117|Cyanobacteria,1HMB8@1161|Nostocales 1117|Cyanobacteria S Tetratricopeptide repeat - - - ko:K20543 - - - - ko00000,ko02000 1.B.55.3 - - TPR_14,TPR_16,TPR_19,TPR_2,TPR_8 HSJS2_k127_3838523_11 1150600.ADIARSV_3930 8.77e-11 74.0 COG4105@1|root,COG4105@2|Bacteria,4NJ5A@976|Bacteroidetes,1IPXN@117747|Sphingobacteriia 976|Bacteroidetes S outer membrane assembly lipoprotein YfiO yfiO - - ko:K05807 - - - - ko00000,ko02000 1.B.33.1 - - YfiO HSJS2_k127_3838523_8 649638.Trad_0025 8.242e-40 165.0 COG1057@1|root,COG1057@2|Bacteria,1WJ70@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) nadD - 2.7.7.18 ko:K00969 ko00760,ko01100,map00760,map01100 M00115 R00137,R03005 RC00002 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_like HSJS2_k127_3838523_0 861299.J421_3566 0.0 1143.0 COG0653@1|root,COG0653@2|Bacteria,1ZSMK@142182|Gemmatimonadetes 142182|Gemmatimonadetes U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane secA - - ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4 - - SEC-C,SecA_DEAD,SecA_PP_bind,SecA_SW HSJS2_k127_3838523_9 861299.J421_1911 6.703e-30 119.0 COG1278@1|root,COG1278@2|Bacteria 2|Bacteria K Cold shock - - - ko:K03704 - - - - ko00000,ko03000 - - - CSD HSJS2_k127_3838523_12 368407.Memar_2463 3.912e-09 64.0 COG3042@1|root,arCOG12676@2157|Archaea 2157|Archaea S Domain of unknown function (DUF333) - - - ko:K09712 - - - - ko00000 - - - DUF333 HSJS2_k127_3838523_3 266117.Rxyl_1052 1.217e-160 519.0 COG1304@1|root,COG1304@2|Bacteria,2GJA5@201174|Actinobacteria,4CP5P@84995|Rubrobacteria 84995|Rubrobacteria C FMN-dependent dehydrogenase - - 1.13.12.4 ko:K00467 ko00620,map00620 - R00319 RC01312 ko00000,ko00001,ko01000 - - - FMN_dh HSJS2_k127_3838523_7 626887.J057_05166 5.394e-48 192.0 COG0545@1|root,COG0545@2|Bacteria,1RDA1@1224|Proteobacteria,1RPMP@1236|Gammaproteobacteria,466UT@72275|Alteromonadaceae 1236|Gammaproteobacteria M COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 mip - 5.2.1.8 ko:K03772,ko:K03773 - - - - ko00000,ko01000,ko03110 - - - FKBP_C,FKBP_N HSJS2_k127_3838523_1 1116369.KB890024_gene4205 2.591e-278 865.0 COG3573@1|root,COG3573@2|Bacteria,1MVX8@1224|Proteobacteria,2TVKJ@28211|Alphaproteobacteria,43JC5@69277|Phyllobacteriaceae 28211|Alphaproteobacteria S FAD binding domain MA20_22130 - - ko:K07077 - - - - ko00000 - - - FAD_binding_2 HSJS2_k127_3838523_13 631454.N177_3479 2.203e-07 60.0 COG0729@1|root,COG0729@2|Bacteria,1MUKM@1224|Proteobacteria,2TRWD@28211|Alphaproteobacteria,1JNBV@119043|Rhodobiaceae 28211|Alphaproteobacteria M Surface antigen tamA - - ko:K07278 - - - - ko00000,ko02000 1.B.33.2.4 - - Bac_surface_Ag,POTRA HSJS2_k127_3846878_2 671143.DAMO_1145 6.936e-17 93.0 COG3842@1|root,COG3842@2|Bacteria,2NNPE@2323|unclassified Bacteria 2|Bacteria E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system gtsA - 3.6.3.25,3.6.3.30,3.6.3.31,3.6.3.55 ko:K02010,ko:K02045,ko:K02049,ko:K02068,ko:K02071,ko:K06857,ko:K10112,ko:K11072 ko00920,ko02010,map00920,map02010 M00185,M00186,M00188,M00190,M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00211,M00238,M00299,M00491,M00602,M00605,M00606 R10531 RC00002 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.1,3.A.1.10,3.A.1.11.1,3.A.1.16,3.A.1.17,3.A.1.24,3.A.1.6.1,3.A.1.6.2,3.A.1.6.3,3.A.1.6.4 - - ABC_tran,TOBE_2 HSJS2_k127_3846878_0 671143.DAMO_1144 3.209e-57 207.0 COG4662@1|root,COG4662@2|Bacteria,2NPF5@2323|unclassified Bacteria 2|Bacteria H Binding-protein-dependent transport system inner membrane component tupB - - ko:K05773 ko02010,map02010 M00186 - - ko00000,ko00001,ko00002,ko02000 3.A.1.6.2,3.A.1.6.4 - - BPD_transp_1 HSJS2_k127_3846878_1 1048339.KB913029_gene4930 2.141e-31 128.0 COG2998@1|root,COG2998@2|Bacteria,2IHMF@201174|Actinobacteria 201174|Actinobacteria H PBP superfamily domain - - - ko:K05772 ko02010,map02010 M00186 - - ko00000,ko00001,ko00002,ko02000 3.A.1.6.2,3.A.1.6.4 - - PBP_like_2 HSJS2_k127_3853435_14 204669.Acid345_4293 8.539e-07 55.0 COG2823@1|root,COG2823@2|Bacteria,3Y99E@57723|Acidobacteria,2JP08@204432|Acidobacteriia 204432|Acidobacteriia S Periplasmic or secreted lipoprotein - - - - - - - - - - - - - HSJS2_k127_3853435_10 1379270.AUXF01000003_gene3644 3.613e-38 153.0 COG2885@1|root,COG2885@2|Bacteria,1ZTR2@142182|Gemmatimonadetes 142182|Gemmatimonadetes M OmpA family - - - - - - - - - - - - OmpA HSJS2_k127_3853435_11 518766.Rmar_2296 3.607e-33 138.0 COG2345@1|root,COG2345@2|Bacteria,4PB2G@976|Bacteroidetes,1FJF8@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes K Transcriptional regulator - - - - - - - - - - - - HTH_20 HSJS2_k127_3853435_12 608538.HTH_0164 2.079e-32 133.0 COG2010@1|root,COG2010@2|Bacteria,2G54Z@200783|Aquificae 200783|Aquificae C Cytochrome C oxidase, cbb3-type, subunit III - - - - - - - - - - - - Cytochrom_C HSJS2_k127_3853435_0 1191523.MROS_1104 4.684e-307 951.0 COG4263@1|root,COG4263@2|Bacteria 2|Bacteria C nitrous-oxide reductase activity nosZ GO:0000041,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006812,GO:0006825,GO:0008150,GO:0015677,GO:0030001,GO:0042597,GO:0044464,GO:0051179,GO:0051234 1.7.2.4,1.9.3.1 ko:K00376,ko:K02275 ko00190,ko00910,ko01100,ko01120,map00190,map00910,map01100,map01120 M00155,M00529 R00081,R02804 RC00016,RC02861 ko00000,ko00001,ko00002,ko01000 3.D.4.2,3.D.4.4,3.D.4.6 - - COX2,Cupredoxin_1 HSJS2_k127_3853435_7 1048983.EL17_22590 1.115e-56 222.0 COG4314@1|root,COG4314@2|Bacteria,4NIPU@976|Bacteroidetes,47NSZ@768503|Cytophagia 976|Bacteroidetes C lipoprotein involved in nitrous oxide reduction - - - ko:K19342 - - - - ko00000 - - - NosL HSJS2_k127_3853435_2 1124780.ANNU01000013_gene3867 1.019e-107 374.0 COG3420@1|root,COG3420@2|Bacteria,4NEGT@976|Bacteroidetes,47KEF@768503|Cytophagia 976|Bacteroidetes P Periplasmic copper-binding protein (NosD) nosD - - ko:K07218 - - - - ko00000 - - - NosD HSJS2_k127_3853435_6 1122176.KB903565_gene3236 3.757e-57 211.0 COG1131@1|root,COG1131@2|Bacteria,4NG9T@976|Bacteroidetes,1IPBT@117747|Sphingobacteriia 976|Bacteroidetes V ABC-type multidrug transport system ATPase component - - - ko:K19340 ko02010,map02010 M00762 - - ko00000,ko00001,ko00002,ko02000 3.A.1.132.2 - - ABC_tran HSJS2_k127_3853435_9 985255.APHJ01000039_gene95 1.28e-45 184.0 COG1277@1|root,COG1277@2|Bacteria,4NGGR@976|Bacteroidetes,1HXF5@117743|Flavobacteriia,2P7D6@244698|Gillisia 976|Bacteroidetes S nitrous oxide - - - ko:K19341 ko02010,map02010 M00762 - - ko00000,ko00001,ko00002,ko02000 3.A.1.132.2 - - ABC2_membrane_2,ABC2_membrane_5 HSJS2_k127_3853435_13 882083.SacmaDRAFT_0336 1.524e-29 124.0 COG3824@1|root,COG3824@2|Bacteria,2IKXW@201174|Actinobacteria,4E4P1@85010|Pseudonocardiales 201174|Actinobacteria S Zincin-like metallopeptidase - - - - - - - - - - - - Zincin_1 HSJS2_k127_3853435_4 448385.sce3015 2.394e-74 274.0 COG0318@1|root,COG0318@2|Bacteria,1MW0Y@1224|Proteobacteria,42SEI@68525|delta/epsilon subdivisions,2WPEN@28221|Deltaproteobacteria,2YY7E@29|Myxococcales 28221|Deltaproteobacteria IQ AMP-binding enzyme C-terminal domain menE - 6.2.1.26 ko:K01911 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R04030 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000 - - - AMP-binding,AMP-binding_C HSJS2_k127_3853435_8 448385.sce3014 2.704e-48 191.0 COG4948@1|root,COG4948@2|Bacteria,1MU8R@1224|Proteobacteria,42WKH@68525|delta/epsilon subdivisions,2WSGE@28221|Deltaproteobacteria,2YVQV@29|Myxococcales 28221|Deltaproteobacteria H Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) menC - 4.2.1.113 ko:K02549 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R04031 RC01053 ko00000,ko00001,ko00002,ko01000 - - - MR_MLE_C,MR_MLE_N HSJS2_k127_3853435_3 448385.sce3013 3.789e-84 300.0 COG1575@1|root,COG1575@2|Bacteria,1MXQQ@1224|Proteobacteria,42S34@68525|delta/epsilon subdivisions,2X5AY@28221|Deltaproteobacteria,2Z34Z@29|Myxococcales 28221|Deltaproteobacteria H Belongs to the MenA family. Type 1 subfamily menA - 2.5.1.74 ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R05617,R06858,R10757 RC02935,RC02936,RC03264 ko00000,ko00001,ko00002,ko01000,ko01006 - - - UbiA HSJS2_k127_3853435_1 987059.RBXJA2T_13966 1.08e-135 437.0 COG0447@1|root,COG0447@2|Bacteria,1QTZ2@1224|Proteobacteria,2VJ36@28216|Betaproteobacteria,1KKKJ@119065|unclassified Burkholderiales 28216|Betaproteobacteria H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) menB - 4.1.3.36 ko:K01661,ko:K07536 ko00130,ko00362,ko01100,ko01110,ko01120,ko01220,map00130,map00362,map01100,map01110,map01120,map01220 M00116,M00540 R05592,R07263 RC01429,RC01923 ko00000,ko00001,ko00002,ko01000 - - - ECH_1 HSJS2_k127_3853435_5 1254432.SCE1572_18295 1.297e-61 229.0 COG1165@1|root,COG1165@2|Bacteria,1MVMZ@1224|Proteobacteria,42PNC@68525|delta/epsilon subdivisions,2WKSZ@28221|Deltaproteobacteria,2YUJF@29|Myxococcales 28221|Deltaproteobacteria H Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) menD - 2.2.1.9 ko:K02551 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R08165 RC02186 ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C,TPP_enzyme_M_2,TPP_enzyme_N HSJS2_k127_3884505_3 1120966.AUBU01000005_gene3720 2.1e-37 160.0 COG2988@1|root,COG2988@2|Bacteria,4NHWW@976|Bacteroidetes,47PWT@768503|Cytophagia 976|Bacteroidetes E Succinylglutamate desuccinylase / Aspartoacylase family astE - 3.5.1.96 ko:K05526 ko00330,ko01100,map00330,map01100 - R00411 RC00064,RC00090 ko00000,ko00001,ko01000 - - - AstE_AspA HSJS2_k127_3884505_0 1089550.ATTH01000001_gene1799 3.265e-212 677.0 COG0517@1|root,COG2170@1|root,COG0517@2|Bacteria,COG2170@2|Bacteria,4NGW0@976|Bacteroidetes,1FIUK@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes H Glutamate-cysteine ligase family 2(GCS2) - - - - - - - - - - - - CBS,GCS2 HSJS2_k127_3884505_2 946483.Cenrod_0353 1.17e-45 187.0 COG0726@1|root,COG0726@2|Bacteria 2|Bacteria G polysaccharide deacetylase cda1 GO:0000003,GO:0000272,GO:0003006,GO:0005575,GO:0005618,GO:0005619,GO:0005623,GO:0005631,GO:0005975,GO:0005976,GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006037,GO:0006039,GO:0006040,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009272,GO:0009277,GO:0009653,GO:0009987,GO:0010383,GO:0010927,GO:0016043,GO:0016052,GO:0016998,GO:0017144,GO:0019953,GO:0022402,GO:0022411,GO:0022413,GO:0022414,GO:0022607,GO:0030154,GO:0030312,GO:0030435,GO:0030437,GO:0030476,GO:0031160,GO:0031505,GO:0032502,GO:0032505,GO:0032989,GO:0034218,GO:0034232,GO:0034293,GO:0042244,GO:0042546,GO:0042737,GO:0043170,GO:0043934,GO:0043935,GO:0044036,GO:0044085,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044277,GO:0044426,GO:0044462,GO:0044464,GO:0044703,GO:0045229,GO:0046348,GO:0048468,GO:0048646,GO:0048856,GO:0048869,GO:0051321,GO:0051704,GO:0070590,GO:0070591,GO:0070726,GO:0070910,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0071853,GO:0071854,GO:0071940,GO:0071944,GO:0071966,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1903046 1.7.3.3,3.5.1.104,3.5.1.41,3.5.2.5 ko:K00365,ko:K01452,ko:K16842,ko:K22278 ko00230,ko00232,ko00520,ko01100,ko01120,map00230,map00232,map00520,map01100,map01120 M00546 R02106,R02333,R02425,R07981 RC00166,RC00300,RC00680,RC02107,RC02551 ko00000,ko00001,ko00002,ko01000 - - - OHCU_decarbox,Polysacc_deac_1 HSJS2_k127_3884505_1 1191523.MROS_2246 4.616e-110 389.0 COG1215@1|root,COG1215@2|Bacteria 2|Bacteria M transferase activity, transferring glycosyl groups - - - - - - - - - - - - Glyco_tranf_2_3,Glycos_transf_2 HSJS2_k127_3884505_4 1163409.UUA_16728 0.0009605 51.0 COG0457@1|root,COG0457@2|Bacteria,1QJ8K@1224|Proteobacteria,1TH6Y@1236|Gammaproteobacteria,1XA5U@135614|Xanthomonadales 135614|Xanthomonadales S Tetratricopeptide repeat - - - - - - - - - - - - - HSJS2_k127_3888078_2 379066.GAU_0638 4.091e-35 147.0 COG0745@1|root,COG0745@2|Bacteria,1ZTEW@142182|Gemmatimonadetes 142182|Gemmatimonadetes KT PglZ domain - - - - - - - - - - - - PglZ,Response_reg HSJS2_k127_3888078_0 861299.J421_3870 4.067e-89 305.0 COG0859@1|root,COG0859@2|Bacteria,1ZT3G@142182|Gemmatimonadetes 142182|Gemmatimonadetes M Glycosyltransferase family 9 (heptosyltransferase) - - - ko:K12982 - - - - ko00000,ko01000,ko01003,ko01005 - GT9 - Glyco_transf_9 HSJS2_k127_3888078_1 861299.J421_4162 2.935e-55 204.0 COG0795@1|root,COG0795@2|Bacteria,1ZTJR@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Predicted permease YjgP/YjgQ family - - - ko:K07091 ko02010,map02010 M00320 - - ko00000,ko00001,ko00002,ko02000 1.B.42.1 - - YjgP_YjgQ HSJS2_k127_3891081_1 1283299.AUKG01000001_gene1924 4.829e-12 69.0 COG0662@1|root,COG0662@2|Bacteria,2GXUC@201174|Actinobacteria,4CT1G@84995|Rubrobacteria 84995|Rubrobacteria G Mannose-6-phosphate isomerase - - - - - - - - - - - - MannoseP_isomer HSJS2_k127_3891081_0 1379270.AUXF01000001_gene2615 1.6e-259 820.0 COG0587@1|root,COG0587@2|Bacteria,1ZU9R@142182|Gemmatimonadetes 142182|Gemmatimonadetes L Helix-hairpin-helix motif - - 2.7.7.7 ko:K14162 - - - - ko00000,ko01000,ko03400 - - - DNA_pol3_alpha,HHH_6,PHP,tRNA_anti-codon HSJS2_k127_3896867_0 671143.DAMO_1588 2.459e-188 605.0 COG1138@1|root,COG1138@2|Bacteria,2NNYV@2323|unclassified Bacteria 2|Bacteria O Cytochrome C assembly protein ccmF GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0017003,GO:0017004,GO:0017006,GO:0018063,GO:0018193,GO:0018198,GO:0018378,GO:0019538,GO:0020037,GO:0022607,GO:0031224,GO:0031226,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046906,GO:0048037,GO:0065003,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564 - ko:K02198,ko:K04016 - - R05712 RC00176 ko00000,ko02000 9.B.14.1 - - CcmF_C,Cytochrom_C_asm HSJS2_k127_3896867_2 1242864.D187_007126 1.694e-42 163.0 COG0526@1|root,COG0526@2|Bacteria,1N726@1224|Proteobacteria,42U61@68525|delta/epsilon subdivisions,2WQRF@28221|Deltaproteobacteria,2YVYE@29|Myxococcales 28221|Deltaproteobacteria CO Redoxin dsbE - - ko:K02199 - - - - ko00000,ko03110 - - - AhpC-TSA HSJS2_k127_3896867_3 794846.AJQU01000006_gene987 4.658e-19 97.0 COG3088@1|root,COG3088@2|Bacteria,1MZZ5@1224|Proteobacteria,2U96P@28211|Alphaproteobacteria,4BEZ9@82115|Rhizobiaceae 28211|Alphaproteobacteria O subunit of a heme lyase cycL - - ko:K02200 - - - - ko00000 - - - CcmH HSJS2_k127_3896867_1 379066.GAU_0602 2.469e-111 366.0 COG0568@1|root,COG0568@2|Bacteria,1ZSNB@142182|Gemmatimonadetes 142182|Gemmatimonadetes K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released - - - ko:K03086 - - - - ko00000,ko03021 - - - Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4 HSJS2_k127_3918808_3 1210884.HG799466_gene12369 8.181e-05 53.0 COG0457@1|root,COG2010@1|root,COG2133@1|root,COG0457@2|Bacteria,COG2010@2|Bacteria,COG2133@2|Bacteria,2IXKV@203682|Planctomycetes 203682|Planctomycetes C Membrane-bound dehydrogenase domain - - - - - - - - - - - - Cytochrom_C HSJS2_k127_3918808_1 1382306.JNIM01000001_gene1022 3.898e-53 192.0 COG2080@1|root,COG2080@2|Bacteria,2G6NT@200795|Chloroflexi 200795|Chloroflexi C 2Fe-2S -binding domain protein - - 1.2.5.3 ko:K03518 - - R11168 RC02800 ko00000,ko01000 - - - Fer2,Fer2_2 HSJS2_k127_3918808_0 861299.J421_1048 7.939e-211 690.0 COG2091@1|root,COG2091@2|Bacteria 2|Bacteria H lysine biosynthetic process via aminoadipic acid - - - - - - - - - - - - CBM9_1 HSJS2_k127_3935128_1 861299.J421_3478 3.104e-73 263.0 COG2870@1|root,COG2870@2|Bacteria,1ZT0S@142182|Gemmatimonadetes 142182|Gemmatimonadetes G pfkB family carbohydrate kinase - - 2.7.1.167,2.7.7.70 ko:K03272 ko00540,ko01100,map00540,map01100 M00064 R05644,R05646 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko01005 - - - PfkB HSJS2_k127_3935128_0 994573.T472_0210455 3.843e-204 651.0 COG2759@1|root,COG2759@2|Bacteria,1TP6N@1239|Firmicutes,247P5@186801|Clostridia,36EI0@31979|Clostridiaceae 186801|Clostridia F Belongs to the formate--tetrahydrofolate ligase family fhs - 6.3.4.3 ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R00943 RC00026,RC00111 ko00000,ko00001,ko00002,ko01000 - - - FTHFS HSJS2_k127_3935128_2 1410613.JNKF01000016_gene2297 2.692e-33 145.0 COG0251@1|root,COG0251@2|Bacteria,4NQ8M@976|Bacteroidetes,2FT8J@200643|Bacteroidia 976|Bacteroidetes J endoribonuclease L-PSP ridA - 3.5.99.10 ko:K09022 - - R11098,R11099 RC03275,RC03354 ko00000,ko01000 - - - Ribonuc_L-PSP HSJS2_k127_3939609_1 1111454.HMPREF1250_0867 8.716e-12 68.0 COG0792@1|root,COG0792@2|Bacteria,1VFHQ@1239|Firmicutes,4H5MB@909932|Negativicutes 909932|Negativicutes L Belongs to the UPF0102 family - - - ko:K07460 - - - - ko00000 - - - UPF0102 HSJS2_k127_3939609_0 861299.J421_2881 5.455e-118 391.0 COG2812@1|root,COG2812@2|Bacteria,1ZTFV@142182|Gemmatimonadetes 142182|Gemmatimonadetes L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity dnaX - 2.7.7.7 ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_delta2,DNA_pol3_gamma3 HSJS2_k127_3956828_1 861299.J421_3009 5.219e-52 194.0 COG0611@1|root,COG0611@2|Bacteria,1ZTIU@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 thiL - 2.7.4.16 ko:K00946 ko00730,ko01100,map00730,map01100 M00127 R00617 RC00002 ko00000,ko00001,ko00002,ko01000 - - - AIRS,AIRS_C HSJS2_k127_3956828_2 1158338.JNLJ01000005_gene1412 4.407e-19 97.0 COG0330@1|root,COG0330@2|Bacteria,2G4WR@200783|Aquificae 200783|Aquificae O prohibitin homologues - - - - - - - - - - - - Band_7 HSJS2_k127_3956828_0 388051.AUFE01000014_gene6072 3.832e-160 519.0 COG0148@1|root,COG0148@2|Bacteria,1MU1N@1224|Proteobacteria,2VH7Y@28216|Betaproteobacteria,1K1WM@119060|Burkholderiaceae 28216|Betaproteobacteria F Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis eno GO:0000015,GO:0000287,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494 4.2.1.11 ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 M00001,M00002,M00003,M00346,M00394 R00658 RC00349 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 - - - Enolase_C,Enolase_N HSJS2_k127_3956828_3 751994.AGIG01000030_gene696 0.000885 46.0 COG2919@1|root,COG2919@2|Bacteria 2|Bacteria D cell cycle ftsB GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0019954,GO:0022402,GO:0022414,GO:0030428,GO:0032153,GO:0032505,GO:0042802,GO:0043093,GO:0044464,GO:0051301,GO:0071944 - ko:K05589 - - - - ko00000,ko03036 - - - DivIC HSJS2_k127_3993655_2 861299.J421_1163 9.612e-47 170.0 COG0445@1|root,COG0445@2|Bacteria,1ZT9H@142182|Gemmatimonadetes 142182|Gemmatimonadetes D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 gidA - - ko:K03495 - - R08701 RC00053,RC00209,RC00870 ko00000,ko03016,ko03036 - - - GIDA,GIDA_assoc HSJS2_k127_3993655_4 882.DVU_1192 9.597e-15 78.0 COG1254@1|root,COG1254@2|Bacteria,1QUKD@1224|Proteobacteria,42XEI@68525|delta/epsilon subdivisions,2WTAI@28221|Deltaproteobacteria 28221|Deltaproteobacteria C PFAM acylphosphatase acyP - 3.6.1.7 ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 - R00317,R01421,R01515 RC00043 ko00000,ko00001,ko01000 - - - Acylphosphatase HSJS2_k127_3993655_3 373903.Hore_04870 8.825e-34 143.0 COG0266@1|root,COG0266@2|Bacteria,1TPM9@1239|Firmicutes,24BH2@186801|Clostridia,3WAJM@53433|Halanaerobiales 186801|Clostridia L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates fpg - 3.2.2.23,4.2.99.18 ko:K10563 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Fapy_DNA_glyco,H2TH,zf-FPG_IleRS HSJS2_k127_3993655_0 1379270.AUXF01000002_gene1185 1.307e-111 389.0 COG0486@1|root,COG0486@2|Bacteria,1ZSRA@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 mnmE - - ko:K03650 - - R08701 RC00053,RC00209,RC00870 ko00000,ko01000,ko03016 - - - MMR_HSR1,MnmE_helical,TrmE_N HSJS2_k127_3993655_1 861299.J421_1067 3.515e-81 280.0 COG0706@1|root,COG0706@2|Bacteria,1ZSKV@142182|Gemmatimonadetes 142182|Gemmatimonadetes U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins yidC - - ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044,ko03029 2.A.9 - - 60KD_IMP,YidC_periplas HSJS2_k127_4018454_0 869210.Marky_1233 1.246e-146 482.0 COG1086@1|root,COG1086@2|Bacteria 2|Bacteria GM Polysaccharide biosynthesis protein - - 2.7.8.33,2.7.8.35 ko:K02851 - - R08856 RC00002 ko00000,ko01000,ko01003,ko01005 - - - Bac_transf,CoA_binding_3,Glycos_transf_4,HTH_45,LicD HSJS2_k127_4018454_1 1120954.ATXE01000002_gene687 6.175e-56 204.0 COG1187@1|root,COG1187@2|Bacteria,2GJ4N@201174|Actinobacteria,4DNT7@85009|Propionibacteriales 201174|Actinobacteria J Belongs to the pseudouridine synthase RsuA family rluB GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.19,5.4.99.22 ko:K06178,ko:K06183 - - - - ko00000,ko01000,ko03009 - - - PseudoU_synth_2,S4 HSJS2_k127_4042154_0 391625.PPSIR1_18075 3.262e-231 731.0 COG1529@1|root,COG1529@2|Bacteria,1MUEA@1224|Proteobacteria,42MER@68525|delta/epsilon subdivisions,2WIYV@28221|Deltaproteobacteria,2YW7P@29|Myxococcales 28221|Deltaproteobacteria C Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding - - 1.2.5.3 ko:K03520 - - R11168 RC02800 ko00000,ko01000 - - - Ald_Xan_dh_C,Ald_Xan_dh_C2 HSJS2_k127_4042154_1 1161401.ASJA01000009_gene1796 5.461e-25 123.0 2EH1A@1|root,33ATA@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HSJS2_k127_4042154_2 1443665.JACA01000001_gene3122 9.804e-11 72.0 COG3595@1|root,COG3595@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - DUF2807,DUF4097 HSJS2_k127_4059687_2 864069.MicloDRAFT_00003990 1.36e-22 104.0 COG0147@1|root,COG0147@2|Bacteria,1MVBJ@1224|Proteobacteria,2TRWB@28211|Alphaproteobacteria,1JREC@119045|Methylobacteriaceae 28211|Alphaproteobacteria EH PFAM Anthranilate synthase component I pabB - 2.6.1.85,4.1.3.27 ko:K01657,ko:K01665 ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025 M00023 R00985,R00986,R01716 RC00010,RC01418,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 - - - Anth_synt_I_N,Chorismate_bind HSJS2_k127_4059687_0 756272.Plabr_2668 3.735e-38 149.0 COG0720@1|root,COG0720@2|Bacteria,2IZMP@203682|Planctomycetes 203682|Planctomycetes H COG0720 6-pyruvoyl-tetrahydropterin synthase - - 4.1.2.50,4.2.3.12 ko:K01737 ko00790,ko01100,map00790,map01100 M00842,M00843 R04286,R09959 RC01117,RC02846,RC02847 ko00000,ko00001,ko00002,ko01000,ko03016 - - - PTPS HSJS2_k127_4059687_1 383372.Rcas_3539 4.224e-29 124.0 COG1514@1|root,COG1514@2|Bacteria,2G76S@200795|Chloroflexi,375YZ@32061|Chloroflexia 32061|Chloroflexia J Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester - - 3.1.4.58 ko:K01975 - - - - ko00000,ko01000,ko03016 - - - LigT_PEase HSJS2_k127_4059687_4 861299.J421_2916 6.313e-07 59.0 28R18@1|root,2ZDFV@2|Bacteria,1ZU2V@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_4059687_3 861299.J421_2921 3.605e-22 98.0 COG0681@1|root,COG0681@2|Bacteria,1ZTQ3@142182|Gemmatimonadetes 142182|Gemmatimonadetes U Signal peptidase, peptidase S26 - - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24 HSJS2_k127_406921_2 661478.OP10G_2096 1.524e-16 85.0 COG2866@1|root,COG2866@2|Bacteria 2|Bacteria E metallocarboxypeptidase activity - - - - - - - - - - - - Peptidase_M14 HSJS2_k127_406921_1 243231.GSU2559 2.746e-112 388.0 COG0248@1|root,COG0248@2|Bacteria,1MV35@1224|Proteobacteria,42NIH@68525|delta/epsilon subdivisions,2WN60@28221|Deltaproteobacteria,43UE3@69541|Desulfuromonadales 28221|Deltaproteobacteria FP metal-dependent phosphohydrolase, HD sub domain gppA-2 - 3.6.1.11,3.6.1.40 ko:K01524 ko00230,map00230 - R03409 RC00002 ko00000,ko00001,ko01000 - - - HD,Ppx-GppA HSJS2_k127_406921_0 502025.Hoch_1780 3.46e-168 535.0 COG0855@1|root,COG0855@2|Bacteria,1MUM3@1224|Proteobacteria,42NN7@68525|delta/epsilon subdivisions,2WJG7@28221|Deltaproteobacteria,2YUAP@29|Myxococcales 28221|Deltaproteobacteria H Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) ppk - 2.7.4.1 ko:K00937 ko00190,ko03018,map00190,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - PP_kinase,PP_kinase_C,PP_kinase_N HSJS2_k127_4084816_2 1379270.AUXF01000004_gene2965 1.185e-06 54.0 COG0735@1|root,COG0735@2|Bacteria,1ZTN4@142182|Gemmatimonadetes 142182|Gemmatimonadetes P Ferric uptake regulator family - - - ko:K03711 - - - - ko00000,ko03000 - - - FUR HSJS2_k127_4084816_1 1266909.AUAG01000016_gene2798 7.85e-33 134.0 COG1430@1|root,COG1430@2|Bacteria,1MZBJ@1224|Proteobacteria,1SDVD@1236|Gammaproteobacteria,1WZPY@135613|Chromatiales 135613|Chromatiales S Uncharacterized ACR, COG1430 - - - ko:K09005 - - - - ko00000 - - - DUF192 HSJS2_k127_4084816_0 266117.Rxyl_2866 1.166e-86 306.0 COG0114@1|root,COG0114@2|Bacteria,2GKWY@201174|Actinobacteria,4CPK3@84995|Rubrobacteria 84995|Rubrobacteria C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate fumC - 4.2.1.2 ko:K01679 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211 M00009,M00011,M00173,M00376 R01082 RC00443 ko00000,ko00001,ko00002,ko01000 - - - FumaraseC_C,Lyase_1 HSJS2_k127_4085117_1 1379270.AUXF01000003_gene3684 4.831e-59 221.0 COG4942@1|root,COG4942@2|Bacteria,1ZSU6@142182|Gemmatimonadetes 142182|Gemmatimonadetes D Peptidase family M23 - - - - - - - - - - - - Peptidase_M23 HSJS2_k127_4085117_0 861299.J421_3797 3.907e-61 234.0 COG0470@1|root,COG0470@2|Bacteria,1ZT21@142182|Gemmatimonadetes 142182|Gemmatimonadetes L DNA polymerase III, delta subunit - - 2.7.7.7 ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_delta2 HSJS2_k127_4085117_2 999541.bgla_1g33320 1.314e-47 182.0 COG0315@1|root,COG0315@2|Bacteria,1RCYZ@1224|Proteobacteria,2VR7B@28216|Betaproteobacteria,1K4PP@119060|Burkholderiaceae 28216|Betaproteobacteria H Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) moaC - 4.6.1.17 ko:K03637 ko00790,ko01100,ko04122,map00790,map01100,map04122 - R11372 RC03425 ko00000,ko00001,ko01000 - - - MoaC HSJS2_k127_4085117_3 379066.GAU_2227 2.313e-33 137.0 COG0741@1|root,COG0741@2|Bacteria,1ZTV6@142182|Gemmatimonadetes 142182|Gemmatimonadetes M Transglycosylase SLT domain - - - - - - - - - - - - SLT HSJS2_k127_41045_1 518766.Rmar_1442 5.504e-150 484.0 COG0577@1|root,COG0577@2|Bacteria,4NECN@976|Bacteroidetes,1FIY8@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD HSJS2_k127_41045_0 518766.Rmar_1441 2.744e-158 509.0 COG0577@1|root,COG0577@2|Bacteria,4NEBD@976|Bacteroidetes 976|Bacteroidetes V ABC-type antimicrobial peptide transport system, permease component - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD HSJS2_k127_41045_3 518766.Rmar_1440 5.167e-108 364.0 COG0845@1|root,COG0845@2|Bacteria,4NFT4@976|Bacteroidetes 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K02005 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23,OEP HSJS2_k127_41045_5 368407.Memar_0814 6.299e-67 250.0 COG1108@1|root,arCOG01006@2157|Archaea,2XTNB@28890|Euryarchaeota,2N9BQ@224756|Methanomicrobia 224756|Methanomicrobia P ABC 3 transport family - - - ko:K09816 ko02010,map02010 M00242 - - ko00000,ko00001,ko00002,ko02000 3.A.1.15.3,3.A.1.15.5 - iAF692.Mbar_A0996 ABC-3 HSJS2_k127_41045_4 335541.Swol_1890 7.768e-77 279.0 COG1121@1|root,COG1121@2|Bacteria,1TQ68@1239|Firmicutes,248F1@186801|Clostridia,42K1X@68298|Syntrophomonadaceae 186801|Clostridia P ABC transporter - - - ko:K09817 ko02010,map02010 M00242 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.15.3,3.A.1.15.5 - - ABC_tran HSJS2_k127_41045_6 1122211.JMLW01000011_gene210 1.732e-31 137.0 COG0803@1|root,COG0803@2|Bacteria,1MVW9@1224|Proteobacteria,1SWIP@1236|Gammaproteobacteria,1XPJZ@135619|Oceanospirillales 135619|Oceanospirillales P Zinc-uptake complex component A periplasmic - - - - - - - - - - - - ZnuA HSJS2_k127_41045_2 518766.Rmar_0400 4.076e-120 399.0 COG1524@1|root,COG1524@2|Bacteria,4NFFG@976|Bacteroidetes,1FJY0@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes S Type I phosphodiesterase / nucleotide pyrophosphatase - - 3.1.3.1 ko:K01113 ko00790,ko01100,ko02020,map00790,map01100,map02020 M00126 R04620 RC00017 ko00000,ko00001,ko00002,ko01000 - - - Phosphodiest HSJS2_k127_41045_7 204536.SULAZ_0431 5.211e-21 95.0 COG1278@1|root,COG1278@2|Bacteria,2G4CP@200783|Aquificae 200783|Aquificae K PFAM Cold-shock protein, DNA-binding - - - ko:K03704 - - - - ko00000,ko03000 - - - CSD HSJS2_k127_41045_8 1047013.AQSP01000132_gene1742 2.623e-07 62.0 COG3391@1|root,COG3391@2|Bacteria,2NQ4G@2323|unclassified Bacteria 2|Bacteria O NHL repeat - - - - - - - - - - - - DUF5128,NHL,TolB_like HSJS2_k127_41522_1 1121406.JAEX01000013_gene1238 5.287e-38 151.0 COG0797@1|root,COG0797@2|Bacteria,1MZ8S@1224|Proteobacteria,42PQF@68525|delta/epsilon subdivisions,2WMCA@28221|Deltaproteobacteria,2MBVF@213115|Desulfovibrionales 28221|Deltaproteobacteria M Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides rlpA - - ko:K03642 - - - - ko00000 - - - DPBB_1,SPOR HSJS2_k127_41522_0 518766.Rmar_0629 1.437e-132 440.0 COG0823@1|root,COG4775@1|root,COG0823@2|Bacteria,COG4775@2|Bacteria,4NERT@976|Bacteroidetes,1FJ3R@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes MU WD40-like Beta Propeller Repeat - - - - - - - - - - - - BSP,Bac_surface_Ag,PD40 HSJS2_k127_4406_2 1379270.AUXF01000003_gene3863 9.052e-41 160.0 COG0508@1|root,COG0508@2|Bacteria,1ZT7I@142182|Gemmatimonadetes 142182|Gemmatimonadetes C 2-oxoacid dehydrogenases acyltransferase (catalytic domain) - - 2.3.1.61 ko:K00658 ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00032 R02570,R02571,R08549 RC00004,RC02727,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - 2-oxoacid_dh,Biotin_lipoyl,E3_binding HSJS2_k127_4406_0 861299.J421_3597 8.754e-119 406.0 COG0022@1|root,COG0022@2|Bacteria,1ZT89@142182|Gemmatimonadetes 2|Bacteria C Transketolase, pyrimidine binding domain bfmBA - 1.2.4.4 ko:K00167,ko:K11381,ko:K21417 ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130 M00036 R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997 RC00027,RC00627,RC02743,RC02883,RC02949,RC02953 br01601,ko00000,ko00001,ko00002,ko01000 - - - E1_dh,Transket_pyr,Transketolase_C HSJS2_k127_4406_1 861299.J421_3598 1.956e-70 250.0 COG1071@1|root,COG1071@2|Bacteria,1ZT5G@142182|Gemmatimonadetes 2|Bacteria C The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) bfmBA - 1.2.4.1,1.2.4.4 ko:K00161,ko:K11381,ko:K21416 ko00010,ko00020,ko00280,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00280,map00620,map00640,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00036,M00307 R00014,R00209,R01699,R03270,R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997 RC00004,RC00027,RC00627,RC02742,RC02743,RC02744,RC02882,RC02883,RC02949,RC02953 br01601,ko00000,ko00001,ko00002,ko01000 - - - E1_dh,Transket_pyr,Transketolase_C HSJS2_k127_461033_1 1379270.AUXF01000005_gene601 1.015e-30 128.0 2E5IJ@1|root,3309Y@2|Bacteria,1ZTU3@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_461033_2 861299.J421_3007 5.367e-25 107.0 2EQ8R@1|root,33HV0@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HSJS2_k127_461033_0 1232410.KI421415_gene3033 3.806e-70 256.0 COG0062@1|root,COG0063@1|root,COG0062@2|Bacteria,COG0063@2|Bacteria,1MU1Q@1224|Proteobacteria,42ND6@68525|delta/epsilon subdivisions,2WIJS@28221|Deltaproteobacteria,43T92@69541|Desulfuromonadales 28221|Deltaproteobacteria H Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration nnrD - 4.2.1.136,5.1.99.6 ko:K17758,ko:K17759 - - - - ko00000,ko01000 - - - Carb_kinase,YjeF_N HSJS2_k127_473852_4 888743.HMPREF9141_0377 0.0001465 48.0 COG0705@1|root,COG0705@2|Bacteria,4NIYR@976|Bacteroidetes,2FNMJ@200643|Bacteroidia 976|Bacteroidetes S Peptidase, S54 family - - 3.4.21.105 ko:K09650 - - - - ko00000,ko01000,ko01002,ko03029 - - - Rhomboid HSJS2_k127_473852_0 1379698.RBG1_1C00001G0830 1.595e-198 639.0 COG0480@1|root,COG0480@2|Bacteria,2NNQD@2323|unclassified Bacteria 2|Bacteria J elongation factor G fusA2 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0030312,GO:0044237,GO:0044464,GO:0071944 - ko:K02355 - - - - ko00000,ko03012,ko03029 - - - EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2 HSJS2_k127_473852_1 880073.Calab_2588 2.754e-79 282.0 COG0217@1|root,COG0217@2|Bacteria,2NNSI@2323|unclassified Bacteria 2|Bacteria K Transcriptional regulatory protein yebC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - - - - - - - - - - Transcrip_reg HSJS2_k127_473852_2 1379270.AUXF01000004_gene3248 7.16e-50 183.0 COG0817@1|root,COG0817@2|Bacteria,1ZTKI@142182|Gemmatimonadetes 142182|Gemmatimonadetes L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group ruvC - 3.1.22.4 ko:K01159 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - RuvC HSJS2_k127_473852_3 1318628.MARLIPOL_08579 1.13e-19 99.0 COG0632@1|root,COG0632@2|Bacteria,1MWJR@1224|Proteobacteria,1RMET@1236|Gammaproteobacteria,466RJ@72275|Alteromonadaceae 1236|Gammaproteobacteria L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB ruvA GO:0000217,GO:0000400,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009379,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0065003,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 ko:K03550 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - HHH_5,RuvA_C,RuvA_N HSJS2_k127_47636_2 945713.IALB_0608 6.492e-60 218.0 COG3591@1|root,COG3591@2|Bacteria 2|Bacteria E Belongs to the peptidase S1B family - - - - - - - - - - - - Peptidase_S46 HSJS2_k127_47636_3 1121875.KB907548_gene1642 1.115e-52 192.0 COG3631@1|root,COG3631@2|Bacteria,4NPKS@976|Bacteroidetes,1I2EQ@117743|Flavobacteriia 976|Bacteroidetes S SnoaL-like domain - - - ko:K06893 - - - - ko00000 - - - DUF4440,SnoaL,SnoaL_2 HSJS2_k127_47636_0 1379698.RBG1_1C00001G0629 6.997e-207 658.0 COG0644@1|root,COG2440@1|root,COG0644@2|Bacteria,COG2440@2|Bacteria 2|Bacteria C oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor etf GO:0003674,GO:0003824,GO:0004174,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016645,GO:0016649,GO:0016722,GO:0017133,GO:0019866,GO:0022900,GO:0022904,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032592,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043783,GO:0044237,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045251,GO:0045333,GO:0048037,GO:0048038,GO:0048039,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070013,GO:0098573,GO:0098798,GO:1902494,GO:1990204 1.5.5.1 ko:K00311 - - - - ko00000,ko01000 - - - ETF_QO,FAD_binding_2,NAD_binding_8,Thi4 HSJS2_k127_47636_1 479434.Sthe_1967 6.57e-115 387.0 COG3004@1|root,COG3004@2|Bacteria,2G7ZG@200795|Chloroflexi 200795|Chloroflexi P ) H( ) antiporter that extrudes sodium in exchange for external protons - - - ko:K03313 - - - - ko00000,ko02000 2.A.33.1 - - Na_H_antiport_1 HSJS2_k127_47636_4 379066.GAU_0374 7.032e-48 188.0 COG0204@1|root,COG0204@2|Bacteria,1ZSY9@142182|Gemmatimonadetes 142182|Gemmatimonadetes I Phosphate acyltransferases - - 2.3.1.51 ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R02241,R09381 RC00004,RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Acyltransferase HSJS2_k127_493525_1 861299.J421_2945 2.095e-93 341.0 COG1196@1|root,COG1196@2|Bacteria,1ZSY1@142182|Gemmatimonadetes 142182|Gemmatimonadetes D Required for chromosome condensation and partitioning smc - - ko:K03529 - - - - ko00000,ko03036 - - - SMC_N,SMC_hinge HSJS2_k127_493525_2 861299.J421_2947 4.727e-14 85.0 COG3087@1|root,COG3087@2|Bacteria,1ZSYS@142182|Gemmatimonadetes 142182|Gemmatimonadetes D Sporulation related domain - - - - - - - - - - - - SPOR HSJS2_k127_493525_0 861299.J421_2948 9.807e-129 441.0 COG0823@1|root,COG4775@1|root,COG0823@2|Bacteria,COG4775@2|Bacteria,1ZSUS@142182|Gemmatimonadetes 142182|Gemmatimonadetes MU Involved in the tonB-independent uptake of proteins - - - - - - - - - - - - Bac_surface_Ag,PD40 HSJS2_k127_527088_0 1089550.ATTH01000001_gene773 1.007e-136 460.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,1FIX7@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran HSJS2_k127_527088_1 1089550.ATTH01000001_gene772 2.155e-95 324.0 COG0845@1|root,COG0845@2|Bacteria,4PEYA@976|Bacteroidetes,1FJUQ@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes M Biotin-lipoyl like - - - - - - - - - - - - HlyD_D23 HSJS2_k127_529057_2 1331060.RLDS_18520 6.267e-35 155.0 COG0823@1|root,COG1228@1|root,COG0823@2|Bacteria,COG1228@2|Bacteria,1R5P1@1224|Proteobacteria,2U0ZV@28211|Alphaproteobacteria,2KEB5@204457|Sphingomonadales 204457|Sphingomonadales QU amidohydrolase - - - - - - - - - - - - Amidohydro_1,Amidohydro_3,PD40 HSJS2_k127_529057_3 339671.Asuc_1791 2.422e-12 81.0 COG0823@1|root,COG0823@2|Bacteria,1MV09@1224|Proteobacteria,1RMCY@1236|Gammaproteobacteria,1Y6X8@135625|Pasteurellales 135625|Pasteurellales U Involved in the TonB-independent uptake of proteins tolB - - ko:K03641 - - - - ko00000,ko02000 2.C.1.2 - - PD40,TolB_N HSJS2_k127_529057_1 518766.Rmar_1743 3.129e-114 375.0 COG1082@1|root,COG1082@2|Bacteria,4NG1K@976|Bacteroidetes 976|Bacteroidetes G Xylose isomerase - - - - - - - - - - - - AP_endonuc_2 HSJS2_k127_529057_4 861299.J421_4179 6.214e-12 75.0 2C9AX@1|root,33WUH@2|Bacteria,1ZTQK@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_529057_0 861299.J421_2423 7.995e-306 985.0 COG0495@1|root,COG0495@2|Bacteria,1ZSXC@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Leucyl-tRNA synthetase, Domain 2 leuS - 6.1.1.4 ko:K01869 ko00970,map00970 M00359,M00360 R03657 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - Anticodon_1,tRNA-synt_1,tRNA-synt_1_2 HSJS2_k127_539163_3 1298863.AUEP01000003_gene2807 7.597e-38 144.0 COG0259@1|root,COG0259@2|Bacteria,2GJCR@201174|Actinobacteria,4DQT7@85009|Propionibacteriales 201174|Actinobacteria H Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) pdxH GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0010181,GO:0016491,GO:0016614,GO:0016899,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0032553,GO:0034641,GO:0036094,GO:0042364,GO:0042802,GO:0042803,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0043167,GO:0043168,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046184,GO:0046483,GO:0046983,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.4.3.5 ko:K00275 ko00750,ko01100,ko01120,map00750,map01100,map01120 M00124 R00277,R00278,R01710,R01711 RC00048,RC00116 ko00000,ko00001,ko00002,ko01000 - - iNJ661.Rv2607 PNP_phzG_C,Putative_PNPOx HSJS2_k127_539163_2 861299.J421_1521 5.166e-94 316.0 COG0614@1|root,COG0614@2|Bacteria 2|Bacteria P abc-type fe3 -hydroxamate transport system, periplasmic component fecB - - ko:K02016 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14 - - Peripla_BP_2 HSJS2_k127_539163_7 234267.Acid_5073 0.0002902 47.0 COG1918@1|root,COG1918@2|Bacteria,3Y92B@57723|Acidobacteria 57723|Acidobacteria P FeoA - - - ko:K04758 - - - - ko00000,ko02000 - - - FeoA HSJS2_k127_539163_0 234267.Acid_5074 1.776e-197 634.0 COG0370@1|root,COG0370@2|Bacteria,3Y3CZ@57723|Acidobacteria 57723|Acidobacteria P Ferrous iron transport protein B - - - ko:K04759 - - - - ko00000,ko02000 9.A.8.1 - - FeoB_C,FeoB_N,Gate HSJS2_k127_539163_1 192952.MM_3198 2.081e-110 375.0 COG1073@1|root,arCOG01661@2157|Archaea,2XVIC@28890|Euryarchaeota,2NANZ@224756|Methanomicrobia 224756|Methanomicrobia S Alpha/beta hydrolase family - - - ko:K06889 - - - - ko00000 - - - Peptidase_S9 HSJS2_k127_539163_4 493475.GARC_4186 1.648e-32 137.0 COG0393@1|root,COG0393@2|Bacteria,1N0XM@1224|Proteobacteria,1S62I@1236|Gammaproteobacteria,467E8@72275|Alteromonadaceae 1236|Gammaproteobacteria S Belongs to the UPF0145 family - - - - - - - - - - - - YbjQ_1 HSJS2_k127_539163_5 880073.Calab_0082 1.068e-30 129.0 COG1595@1|root,COG1595@2|Bacteria 2|Bacteria K DNA-templated transcription, initiation - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 HSJS2_k127_545725_2 742741.HMPREF9475_00039 2.634e-07 53.0 COG1228@1|root,COG1228@2|Bacteria,1TVY2@1239|Firmicutes,24D7Q@186801|Clostridia 186801|Clostridia Q Amidohydrolase family - - - - - - - - - - - - Amidohydro_1,Amidohydro_3 HSJS2_k127_545725_0 292459.STH3193 9.699e-262 816.0 COG2987@1|root,COG2987@2|Bacteria,1TPZ9@1239|Firmicutes,247YS@186801|Clostridia 186801|Clostridia E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate hutU - 4.2.1.49 ko:K01712 ko00340,ko01100,map00340,map01100 M00045 R02914 RC00804 ko00000,ko00001,ko00002,ko01000 - - - Urocanase,Urocanase_C,Urocanase_N HSJS2_k127_545725_1 448385.sce6976 4.963e-25 118.0 COG1413@1|root,COG3202@1|root,COG1413@2|Bacteria,COG3202@2|Bacteria 2|Bacteria C ATP:ADP antiporter activity - - - ko:K01932,ko:K03301 - - - - ko00000,ko01000 2.A.12 - - Glyco_transf_4,Glycos_transf_1,HEAT_2,TLC HSJS2_k127_558683_0 1205680.CAKO01000008_gene4203 5.129e-70 250.0 COG3616@1|root,COG3616@2|Bacteria,1N2SF@1224|Proteobacteria,2VFY5@28211|Alphaproteobacteria,2JRKP@204441|Rhodospirillales 204441|Rhodospirillales E Putative serine dehydratase domain - - - - - - - - - - - - Ala_racemase_N,D-ser_dehydrat HSJS2_k127_558683_1 379066.GAU_0474 1.206e-37 149.0 COG1595@1|root,COG1595@2|Bacteria,1ZSWF@142182|Gemmatimonadetes 142182|Gemmatimonadetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 HSJS2_k127_558683_2 330214.NIDE1608 1.515e-15 87.0 COG0296@1|root,COG0296@2|Bacteria 2|Bacteria G 1,4-alpha-glucan branching enzyme activity - - 2.4.1.18 ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 M00565 R02110 - ko00000,ko00001,ko00002,ko01000,ko04147 - CBM48,GH13 - AMPK1_CBM,Alpha-amylase,Alpha-amylase_C,CBM_48 HSJS2_k127_558683_3 379066.GAU_3900 7.783e-07 59.0 28YSJ@1|root,343H2@2|Bacteria,1ZU2N@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_559381_2 555088.DealDRAFT_0602 8.741e-06 49.0 COG0733@1|root,COG0733@2|Bacteria,1TP6B@1239|Firmicutes,2485D@186801|Clostridia 186801|Clostridia S Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family - - - ko:K03308 - - - - ko00000 2.A.22.4,2.A.22.5 - - SNF HSJS2_k127_559381_0 391625.PPSIR1_27763 2.928e-133 433.0 COG1013@1|root,COG1013@2|Bacteria,1R5BF@1224|Proteobacteria,42MRV@68525|delta/epsilon subdivisions,2WK9C@28221|Deltaproteobacteria,2YZ1X@29|Myxococcales 28221|Deltaproteobacteria C PFAM thiamine pyrophosphate protein domain protein TPP-binding - - 1.2.7.11,1.2.7.3 ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - PFO_beta_C,TPP_enzyme_C HSJS2_k127_559381_1 391625.PPSIR1_27758 1.377e-66 231.0 COG0674@1|root,COG1014@1|root,COG0674@2|Bacteria,COG1014@2|Bacteria,1NBSJ@1224|Proteobacteria,42MXV@68525|delta/epsilon subdivisions,2WIIT@28221|Deltaproteobacteria,2YY6V@29|Myxococcales 28221|Deltaproteobacteria C Pyruvate flavodoxin ferredoxin - - 1.2.7.11,1.2.7.3 ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - PFOR_II,POR,POR_N HSJS2_k127_564588_2 349161.Dred_2240 5.652e-08 65.0 COG0683@1|root,COG0683@2|Bacteria,1TPQ2@1239|Firmicutes,248H1@186801|Clostridia,260J0@186807|Peptococcaceae 186801|Clostridia E PFAM Extracellular ligand-binding receptor - - - ko:K01999 ko02010,ko02024,map02010,map02024 M00237 - - ko00000,ko00001,ko00002,ko02000 3.A.1.4 - - Peripla_BP_6 HSJS2_k127_564588_0 1379698.RBG1_1C00001G1471 8.827e-247 771.0 COG4799@1|root,COG4799@2|Bacteria,2NNWQ@2323|unclassified Bacteria 2|Bacteria I carboxyl transferase pccB - 2.1.3.15,6.4.1.3 ko:K01966 ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200 M00373,M00741 R01859 RC00097,RC00609 ko00000,ko00001,ko00002,ko01000 - - - Carboxyl_trans HSJS2_k127_564588_1 290397.Adeh_0257 3.414e-45 170.0 COG0439@1|root,COG0439@2|Bacteria,1MU4H@1224|Proteobacteria,42M14@68525|delta/epsilon subdivisions,2WIN7@28221|Deltaproteobacteria,2YUGB@29|Myxococcales 28221|Deltaproteobacteria I Biotin carboxylase C-terminal domain pccA - 6.3.4.14,6.3.4.6,6.4.1.2 ko:K01941,ko:K01961 ko00061,ko00220,ko00620,ko00640,ko00720,ko00791,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00220,map00620,map00640,map00720,map00791,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R00774,R04385 RC00040,RC00253,RC00367,RC00378 ko00000,ko00001,ko00002,ko01000 - - - Biotin_carb_C,Biotin_carb_N,CPSase_L_D2 HSJS2_k127_564821_1 1122221.JHVI01000001_gene1928 2.317e-06 55.0 COG0719@1|root,COG0719@2|Bacteria,1WJ1E@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus O TIGRFAM FeS assembly protein SufD - - - ko:K09015 - - - - ko00000 - - - UPF0051 HSJS2_k127_564821_0 926554.KI912639_gene1729 1.605e-197 620.0 COG0719@1|root,COG0719@2|Bacteria,1WIDC@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus O ABC-type transport system involved in Fe-S cluster assembly, permease component - - - ko:K09014 - - - - ko00000 - - - UPF0051 HSJS2_k127_571597_0 243231.GSU3323 1.967e-124 413.0 COG0855@1|root,COG0855@2|Bacteria,1MUM3@1224|Proteobacteria,42NN7@68525|delta/epsilon subdivisions,2WJG7@28221|Deltaproteobacteria,43STK@69541|Desulfuromonadales 28221|Deltaproteobacteria H Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) ppk - 2.7.4.1 ko:K00937 ko00190,ko03018,map00190,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - PP_kinase,PP_kinase_C,PP_kinase_N HSJS2_k127_571597_1 395493.BegalDRAFT_2015 4.185e-11 66.0 COG2062@1|root,COG2062@2|Bacteria,1PKQP@1224|Proteobacteria,1SDUE@1236|Gammaproteobacteria 1236|Gammaproteobacteria T Phosphoglycerate mutase family - - - - - - - - - - - - His_Phos_1 HSJS2_k127_586037_1 234267.Acid_1337 7.682e-21 100.0 COG0346@1|root,COG0346@2|Bacteria 2|Bacteria E lactoylglutathione lyase activity - - - ko:K03088 - - - - ko00000,ko03021 - - - Glyoxalase HSJS2_k127_586037_0 483219.LILAB_06150 2.852e-54 198.0 COG1502@1|root,COG1502@2|Bacteria,1MWUW@1224|Proteobacteria,42PV9@68525|delta/epsilon subdivisions,2WKF2@28221|Deltaproteobacteria,2YWP2@29|Myxococcales 28221|Deltaproteobacteria I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol clsA - - ko:K06131 ko00564,ko01100,map00564,map01100 - R07390 RC00017 ko00000,ko00001,ko01000 - - - PLDc_2,PLDc_N HSJS2_k127_59132_0 1123237.Salmuc_00985 1.582e-62 223.0 COG0639@1|root,COG0639@2|Bacteria,1RD8M@1224|Proteobacteria,2U7N2@28211|Alphaproteobacteria 28211|Alphaproteobacteria T COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases - - 3.1.3.16 ko:K07313 - - - - ko00000,ko01000 - - - Metallophos HSJS2_k127_59132_1 766499.C357_10387 4.422e-37 143.0 COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,1MVI9@1224|Proteobacteria,2TT1Y@28211|Alphaproteobacteria 28211|Alphaproteobacteria D protein involved in exopolysaccharide biosynthesis - - - ko:K16554 ko05111,map05111 - - - ko00000,ko00001,ko02000 8.A.3.1 - - AAA_31,GNVR,Wzz HSJS2_k127_631060_2 546414.Deide_13730 1.228e-51 201.0 COG4365@1|root,COG4365@2|Bacteria,1WIHE@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S Belongs to the BshC family bshC - - ko:K22136 - - - - ko00000 - - - BshC HSJS2_k127_631060_1 379066.GAU_1597 5.351e-96 334.0 COG0728@1|root,COG0728@2|Bacteria,1ZTCM@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane murJ - - ko:K03980 - - - - ko00000,ko01011,ko02000 2.A.66.4 - - MVIN HSJS2_k127_631060_0 379066.GAU_1598 1.814e-118 398.0 COG0322@1|root,COG0322@2|Bacteria,1ZSXE@142182|Gemmatimonadetes 142182|Gemmatimonadetes L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision uvrC - - ko:K03703 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - GIY-YIG,HHH_5,UVR,UvrC_HhH_N HSJS2_k127_63132_1 324602.Caur_2057 1.433e-51 193.0 COG0139@1|root,COG0140@1|root,COG0139@2|Bacteria,COG0140@2|Bacteria,2G6YA@200795|Chloroflexi,375HD@32061|Chloroflexia 32061|Chloroflexia E Histidine biosynthesis bifunctional protein HisIE hisI - 3.5.4.19,3.6.1.31 ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04035,R04037 RC00002,RC01055 ko00000,ko00001,ko00002,ko01000 - - - PRA-CH,PRA-PH HSJS2_k127_63132_5 1071085.KK033114_gene1181 2.539e-09 69.0 arCOG10130@1|root,arCOG10130@2157|Archaea,2XZWX@28890|Euryarchaeota,23Y13@183963|Halobacteria 183963|Halobacteria S metal-sulfur cluster biosynthetic enzyme - - - - - - - - - - - - - HSJS2_k127_63132_2 485913.Krac_12220 5.453e-33 141.0 COG3396@1|root,COG3396@2|Bacteria,2G9KQ@200795|Chloroflexi 200795|Chloroflexi S PFAM phenylacetic acid catabolic family protein - - 1.14.13.149 ko:K02611 ko00360,ko01120,map00360,map01120 - R09838 RC02690 ko00000,ko00001,ko01000 - - - PaaA_PaaC HSJS2_k127_63132_4 1198232.CYCME_2337 7.996e-11 66.0 COG3460@1|root,COG3460@2|Bacteria,1ND92@1224|Proteobacteria 1224|Proteobacteria Q Phenylacetic acid degradation B - - - - - - - - - - - - PaaB HSJS2_k127_63132_3 1120973.AQXL01000095_gene246 1.172e-26 121.0 COG2151@1|root,COG2151@2|Bacteria,1VE3S@1239|Firmicutes,4HKP6@91061|Bacilli 91061|Bacilli S Iron-sulfur cluster assembly protein - - - - - - - - - - - - FeS_assembly_P HSJS2_k127_63132_0 266117.Rxyl_1756 2.249e-53 191.0 COG3396@1|root,COG3396@2|Bacteria,2GMQ3@201174|Actinobacteria,4CQIA@84995|Rubrobacteria 84995|Rubrobacteria S phenylacetic acid catabolic - - 1.14.13.149 ko:K02609 ko00360,ko01120,map00360,map01120 - R09838 RC02690 ko00000,ko00001,ko01000 - - - PaaA_PaaC HSJS2_k127_635837_1 234267.Acid_4473 1.202e-40 163.0 COG0535@1|root,COG0535@2|Bacteria 2|Bacteria I radical SAM domain protein - - - ko:K15045 ko05164,map05164 - - - ko00000,ko00001 - - - Fer4_12,Fer4_14,Radical_SAM,SPASM HSJS2_k127_635837_0 243233.MCA1545 0.0 1255.0 COG0646@1|root,COG1410@1|root,COG0646@2|Bacteria,COG1410@2|Bacteria,1MV6G@1224|Proteobacteria,1RMYD@1236|Gammaproteobacteria,1XE0B@135618|Methylococcales 135618|Methylococcales H Vitamin B12 dependent methionine synthase, activation metH - 2.1.1.13 ko:K00548 ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230 M00017 R00946,R09365 RC00035,RC00113,RC01241 ko00000,ko00001,ko00002,ko01000 - - - B12-binding,B12-binding_2,Met_synt_B12,Pterin_bind,S-methyl_trans HSJS2_k127_643109_2 861299.J421_2469 3.275e-23 102.0 COG0646@1|root,COG0685@1|root,COG0646@2|Bacteria,COG0685@2|Bacteria,1ZT6C@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Methylenetetrahydrofolate reductase - - 1.5.1.20,2.1.1.10 ko:K00297,ko:K00547 ko00270,ko00670,ko00720,ko01100,ko01110,ko01120,ko01200,ko01523,map00270,map00670,map00720,map01100,map01110,map01120,map01200,map01523 M00377 R00650,R01224,R07168 RC00003,RC00035,RC00081 ko00000,ko00001,ko00002,ko01000 - - - MTHFR,S-methyl_trans HSJS2_k127_643109_3 1047013.AQSP01000131_gene1844 2.237e-21 109.0 COG1238@1|root,COG1238@2|Bacteria 2|Bacteria I metal cluster binding yqaA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.1.27 ko:K19302 ko00550,map00550 - R05627 RC00002 ko00000,ko00001,ko01000,ko01011 - - - SNARE_assoc HSJS2_k127_643109_4 1463825.JNXC01000021_gene7199 0.0001125 48.0 COG0631@1|root,COG0631@2|Bacteria,2GKDM@201174|Actinobacteria,4E20G@85010|Pseudonocardiales 201174|Actinobacteria T Serine/threonine phosphatases, family 2C, catalytic domain - - - - - - - - - - - - DZR,PP2C_2 HSJS2_k127_643109_1 861299.J421_3635 1.958e-51 192.0 COG0565@1|root,COG0565@2|Bacteria,1ZT19@142182|Gemmatimonadetes 142182|Gemmatimonadetes J SpoU rRNA Methylase family - - 2.1.1.200 ko:K02533,ko:K15396 - - - - ko00000,ko01000,ko03016 - - - SpoU_methylase HSJS2_k127_643109_0 330214.NIDE1289 1.951e-115 383.0 COG0058@1|root,COG0058@2|Bacteria,3J0W1@40117|Nitrospirae 40117|Nitrospirae G Carbohydrate phosphorylase - - 2.4.1.1 ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 - R02111 - ko00000,ko00001,ko01000 - GT35 - DUF3417,Phosphorylase HSJS2_k127_672386_4 1131269.AQVV01000032_gene304 3.874e-06 53.0 2DCXT@1|root,2ZFR8@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - HSJS2_k127_672386_2 861299.J421_2706 4.802e-07 60.0 2FCPE@1|root,344SN@2|Bacteria,1ZU2F@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_672386_0 1379270.AUXF01000004_gene3097 3.372e-74 254.0 COG0302@1|root,COG0302@2|Bacteria,1ZT6I@142182|Gemmatimonadetes 142182|Gemmatimonadetes H GTP cyclohydrolase I folE - 3.5.4.16 ko:K01495 ko00790,ko01100,map00790,map01100 M00126,M00841,M00842,M00843 R00428,R04639,R05046,R05048 RC00263,RC00294,RC00323,RC00945,RC01188 ko00000,ko00001,ko00002,ko01000 - - - GTP_cyclohydroI HSJS2_k127_672386_1 518766.Rmar_0192 1.715e-44 169.0 COG0720@1|root,COG0720@2|Bacteria,4NNY0@976|Bacteroidetes,1FJAI@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes H 6-pyruvoyl tetrahydropterin synthase - - 4.1.2.50,4.2.3.12 ko:K01737 ko00790,ko01100,map00790,map01100 M00842,M00843 R04286,R09959 RC01117,RC02846,RC02847 ko00000,ko00001,ko00002,ko01000,ko03016 - - - PTPS HSJS2_k127_672386_3 1869.MB27_22625 2.147e-06 57.0 COG0308@1|root,COG0308@2|Bacteria,2I936@201174|Actinobacteria,4D8M4@85008|Micromonosporales 201174|Actinobacteria E Peptidase family M1 domain - - - - - - - - - - - - Peptidase_M1 HSJS2_k127_680768_0 1403819.BATR01000154_gene5149 6.032e-115 392.0 COG0323@1|root,COG0323@2|Bacteria,46SG5@74201|Verrucomicrobia,2ITR4@203494|Verrucomicrobiae 203494|Verrucomicrobiae L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex mutL - - ko:K03572 ko03430,map03430 - - - ko00000,ko00001,ko03400 - - - DNA_mis_repair,HATPase_c_3,MutL_C HSJS2_k127_680768_2 525903.Taci_1029 1.338e-48 187.0 COG0324@1|root,COG0324@2|Bacteria,3T9T0@508458|Synergistetes 508458|Synergistetes H Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) miaA - 2.5.1.75 ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 - R01122 RC02820 ko00000,ko00001,ko01000,ko01006,ko03016 - - - IPPT HSJS2_k127_680768_1 379066.GAU_1532 4.822e-94 312.0 COG0297@1|root,COG0438@1|root,COG0297@2|Bacteria,COG0438@2|Bacteria,1ZT2W@142182|Gemmatimonadetes 142182|Gemmatimonadetes M Glycosyl transferase 4-like - - - ko:K00754 - - - - ko00000,ko01000 - GT4 - Glyco_transf_4,Glycos_transf_1 HSJS2_k127_683022_2 1449076.JOOE01000002_gene1300 1.724e-45 176.0 COG2010@1|root,COG2010@2|Bacteria,1MXXQ@1224|Proteobacteria,2U38E@28211|Alphaproteobacteria,2KCD6@204457|Sphingomonadales 204457|Sphingomonadales C Cytochrome C oxidase, cbb3-type, subunit III - - - - - - - - - - - - - HSJS2_k127_683022_0 1192034.CAP_0196 3.134e-89 308.0 COG3503@1|root,COG3503@2|Bacteria,1QQ9D@1224|Proteobacteria,431ME@68525|delta/epsilon subdivisions,2WWTB@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Protein of unknown function (DUF1624) - - - - - - - - - - - - DUF1624 HSJS2_k127_683022_1 1161401.ASJA01000012_gene892 1.02e-52 198.0 2CHCP@1|root,32S5R@2|Bacteria,1MZ97@1224|Proteobacteria,2U9KI@28211|Alphaproteobacteria,43Y10@69657|Hyphomonadaceae 28211|Alphaproteobacteria S Domain of unknown function (DU1801) - - - - - - - - - - - - DUF1801 HSJS2_k127_683022_3 56780.SYN_02013 1.579e-23 103.0 COG1539@1|root,COG1539@2|Bacteria,1QVAP@1224|Proteobacteria,43BPU@68525|delta/epsilon subdivisions,2X712@28221|Deltaproteobacteria 28221|Deltaproteobacteria H Putative molybdenum carrier - - - - - - - - - - - - MoCo_carrier HSJS2_k127_688468_1 526222.Desal_3201 6.169e-19 96.0 COG0457@1|root,COG0457@2|Bacteria,1NNJ6@1224|Proteobacteria,42PBD@68525|delta/epsilon subdivisions,2WKWJ@28221|Deltaproteobacteria,2M91R@213115|Desulfovibrionales 28221|Deltaproteobacteria S Tetratricopeptide repeat - - - - - - - - - - - - PMT_2,TPR_1,TPR_11,TPR_16,TPR_17,TPR_2,TPR_8 HSJS2_k127_688468_0 1121918.ARWE01000001_gene3484 5.815e-30 138.0 COG4399@1|root,COG4399@2|Bacteria,1R42C@1224|Proteobacteria,42Q2W@68525|delta/epsilon subdivisions,2WJIA@28221|Deltaproteobacteria,43S0C@69541|Desulfuromonadales 28221|Deltaproteobacteria S Protein of unknown function (DUF445) - - - - - - - - - - - - DUF445 HSJS2_k127_697826_2 797210.Halxa_1993 7.098e-96 322.0 COG2116@1|root,arCOG03454@2157|Archaea,2XWFN@28890|Euryarchaeota,23V4W@183963|Halobacteria 183963|Halobacteria P COG2116 Formate nitrite family of transporters - - - ko:K21990 - - - - ko00000 1.A.16.4 - - Form_Nir_trans HSJS2_k127_697826_0 1173027.Mic7113_3323 9.536e-221 706.0 COG0591@1|root,COG0591@2|Bacteria,1G1JV@1117|Cyanobacteria,1H88V@1150|Oscillatoriales 1117|Cyanobacteria E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family putP - - - - - - - - - - - SSF HSJS2_k127_697826_4 1379270.AUXF01000004_gene2957 1.434e-59 234.0 COG1472@1|root,COG1472@2|Bacteria,1ZST8@142182|Gemmatimonadetes 142182|Gemmatimonadetes G Glycosyl hydrolase family 3 N terminal domain - - 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - GH3 - Glyco_hydro_3 HSJS2_k127_697826_3 1128421.JAGA01000001_gene2309 4.88e-86 305.0 COG2377@1|root,COG2377@2|Bacteria,2NNMN@2323|unclassified Bacteria 2|Bacteria F Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling anmK GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0044237 2.7.1.170,4.2.1.126 ko:K07106,ko:K09001 ko00520,ko01100,map00520,map01100 - R08555 RC00397,RC00746 ko00000,ko00001,ko01000 - - iECABU_c1320.ECABU_c18930,iECED1_1282.ECED1_1841,ic_1306.c2032 AnmK HSJS2_k127_697826_1 1254432.SCE1572_49580 6.445e-153 504.0 COG0405@1|root,COG0405@2|Bacteria,1MUV6@1224|Proteobacteria,42NY8@68525|delta/epsilon subdivisions,2WJNT@28221|Deltaproteobacteria,2YU0V@29|Myxococcales 28221|Deltaproteobacteria M gamma-glutamyltransferase ggt - 2.3.2.2,3.4.19.13 ko:K00681 ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100 - R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935 RC00064,RC00090,RC00096 ko00000,ko00001,ko01000,ko01002 - - - G_glu_transpept HSJS2_k127_714882_7 518766.Rmar_1718 1.612e-06 51.0 COG0848@1|root,COG0848@2|Bacteria,4NKT1@976|Bacteroidetes,1FJCP@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes U Biopolymer transport protein ExbD/TolR - - - ko:K03559 - - - - ko00000,ko02000 1.A.30.2.1 - - ExbD HSJS2_k127_714882_6 880073.Calab_2425 2.022e-22 102.0 COG0848@1|root,COG0848@2|Bacteria 2|Bacteria U biopolymer transport protein - - - ko:K03559 - - - - ko00000,ko02000 1.A.30.2.1 - - ExbD HSJS2_k127_714882_5 945713.IALB_1535 7.091e-37 147.0 COG0811@1|root,COG0811@2|Bacteria 2|Bacteria U bacteriocin transport exbB - - ko:K03561 - - - - ko00000,ko02000 1.A.30.2.1 - - MotA_ExbB HSJS2_k127_714882_3 861299.J421_3044 1.689e-68 250.0 COG1624@1|root,COG1624@2|Bacteria,1ZUI8@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria dacA - 2.7.7.85 ko:K18672 - - - - ko00000,ko01000 - - - DisA_N HSJS2_k127_714882_2 1380390.JIAT01000011_gene2842 8.295e-73 254.0 COG0294@1|root,COG0294@2|Bacteria,2GJDQ@201174|Actinobacteria,4CPWZ@84995|Rubrobacteria 84995|Rubrobacteria H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives - - 2.5.1.15 ko:K00796 ko00790,ko01100,map00790,map01100 M00126,M00841 R03066,R03067 RC00121,RC00842 ko00000,ko00001,ko00002,ko01000 - - - Pterin_bind HSJS2_k127_714882_1 379066.GAU_1393 8.728e-79 270.0 COG0465@1|root,COG0465@2|Bacteria,1ZSRI@142182|Gemmatimonadetes 142182|Gemmatimonadetes O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins ftsH - - ko:K03798 - M00742 - - ko00000,ko00002,ko01000,ko01002,ko03110 - - - AAA,Peptidase_M41 HSJS2_k127_714882_0 861299.J421_3042 1.858e-168 541.0 COG0465@1|root,COG0465@2|Bacteria,1ZSRI@142182|Gemmatimonadetes 142182|Gemmatimonadetes O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins ftsH - - ko:K03798 - M00742 - - ko00000,ko00002,ko01000,ko01002,ko03110 - - - AAA,Peptidase_M41 HSJS2_k127_714882_4 1379270.AUXF01000005_gene655 1.26e-65 228.0 COG0634@1|root,COG0634@2|Bacteria,1ZTH7@142182|Gemmatimonadetes 142182|Gemmatimonadetes F Phosphoribosyl transferase domain - - 2.4.2.8 ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 - R00190,R01132,R01229,R02142,R08237,R08238,R08245 RC00063,RC00122 ko00000,ko00001,ko01000 - - - Pribosyltran HSJS2_k127_716243_1 1379270.AUXF01000001_gene2681 5.373e-24 108.0 COG0415@1|root,COG0415@2|Bacteria,1ZUPI@142182|Gemmatimonadetes 142182|Gemmatimonadetes L DNA photolyase - - 4.1.99.3 ko:K01669 - - - - ko00000,ko01000,ko03400 - - - DNA_photolyase HSJS2_k127_716243_0 322710.Avin_20870 1.782e-144 476.0 COG0457@1|root,COG0457@2|Bacteria,1N0A9@1224|Proteobacteria,1RZSZ@1236|Gammaproteobacteria 1236|Gammaproteobacteria S COG0457 FOG TPR repeat - - - - - - - - - - - - TPR_16,TPR_2,TPR_7 HSJS2_k127_724906_0 1192034.CAP_5445 7.39e-43 166.0 COG0546@1|root,COG0546@2|Bacteria,1RBMZ@1224|Proteobacteria,42RG3@68525|delta/epsilon subdivisions,2WZ2N@28221|Deltaproteobacteria,2Z16Z@29|Myxococcales 28221|Deltaproteobacteria S HAD-hyrolase-like - - 3.6.1.1 ko:K06019 ko00190,map00190 - - - ko00000,ko00001,ko01000 - - - HAD_2 HSJS2_k127_750749_0 379066.GAU_2148 1.877e-228 736.0 COG1197@1|root,COG1197@2|Bacteria,1ZT88@142182|Gemmatimonadetes 142182|Gemmatimonadetes L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site mfd - - ko:K03723 ko03420,map03420 - - - ko00000,ko00001,ko01000,ko03400 - - - CarD_CdnL_TRCF,DEAD,Helicase_C,TRCF HSJS2_k127_764421_5 1120953.AUBH01000003_gene1948 3.636e-22 110.0 COG0665@1|root,COG0665@2|Bacteria,1MU7M@1224|Proteobacteria,1RS24@1236|Gammaproteobacteria,46BT1@72275|Alteromonadaceae 1236|Gammaproteobacteria E FAD dependent oxidoreductase solA - - - - - - - - - - - DAO HSJS2_k127_764421_2 1236902.ANAS01000005_gene4834 1.055e-36 153.0 COG0346@1|root,COG0346@2|Bacteria,2GRGB@201174|Actinobacteria 201174|Actinobacteria E Glyoxalase-like domain - - - - - - - - - - - - Glyoxalase_3 HSJS2_k127_764421_3 215803.DB30_2558 2.628e-26 117.0 2DEWU@1|root,2ZPJP@2|Bacteria,1PVUN@1224|Proteobacteria,4384A@68525|delta/epsilon subdivisions,2X3E6@28221|Deltaproteobacteria,2YVNZ@29|Myxococcales 28221|Deltaproteobacteria - - - - - - - - - - - - - - - HSJS2_k127_764421_0 502025.Hoch_1451 1.703e-45 177.0 COG0662@1|root,COG0662@2|Bacteria,1RHWU@1224|Proteobacteria,42U1Z@68525|delta/epsilon subdivisions,2WQ05@28221|Deltaproteobacteria,2Z1RY@29|Myxococcales 28221|Deltaproteobacteria G Cupin domain - - - - - - - - - - - - Cupin_2 HSJS2_k127_764421_4 1535422.ND16A_3607 3.252e-22 98.0 2C42K@1|root,32TH9@2|Bacteria,1P3ER@1224|Proteobacteria,1SSSH@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - HSJS2_k127_791325_0 221027.JO40_02790 1.242e-121 407.0 COG2986@1|root,COG2986@2|Bacteria,2J72J@203691|Spirochaetes 203691|Spirochaetes E Histidine ammonia-lyase hutH - 4.3.1.3 ko:K01745 ko00340,ko01100,map00340,map01100 M00045 R01168 RC00361 ko00000,ko00001,ko00002,ko01000 - - - Lyase_aromatic HSJS2_k127_791325_1 584708.Apau_0125 5.11e-06 51.0 COG3404@1|root,COG3404@2|Bacteria,3TBGK@508458|Synergistetes 508458|Synergistetes E Formiminotransferase-cyclodeaminase - - - - - - - - - - - - FTCD_C HSJS2_k127_792479_0 479434.Sthe_1229 5.658e-91 310.0 COG2197@1|root,COG2197@2|Bacteria 2|Bacteria K response regulator - - - - - - - - - - - - GerE HSJS2_k127_792479_3 37659.JNLN01000001_gene523 2.457e-58 218.0 2E16R@1|root,3020K@2|Bacteria,1USXP@1239|Firmicutes,25083@186801|Clostridia,36RJZ@31979|Clostridiaceae 186801|Clostridia - - - - - - - - - - - - - - - HSJS2_k127_792479_2 391625.PPSIR1_22084 2.981e-66 236.0 COG3324@1|root,COG3324@2|Bacteria 2|Bacteria E translation initiation factor activity - - - ko:K06996 - - - - ko00000 - - - Glyoxalase HSJS2_k127_792479_1 1122176.KB903546_gene1013 1.947e-78 280.0 COG2866@1|root,COG2866@2|Bacteria,4NDXH@976|Bacteroidetes,1IQCS@117747|Sphingobacteriia 976|Bacteroidetes E Zinc carboxypeptidase - - - - - - - - - - - - Peptidase_M14 HSJS2_k127_792479_4 566466.NOR53_3413 7.567e-13 74.0 COG0457@1|root,COG5616@1|root,COG0457@2|Bacteria,COG5616@2|Bacteria,1MUMZ@1224|Proteobacteria,1T234@1236|Gammaproteobacteria 1236|Gammaproteobacteria K Adenylate cyclase - - - - - - - - - - - - TPR_16 HSJS2_k127_809207_1 357808.RoseRS_3070 1.905e-99 332.0 COG0803@1|root,COG0803@2|Bacteria,2G5WF@200795|Chloroflexi,375H5@32061|Chloroflexia 32061|Chloroflexia P Belongs to the bacterial solute-binding protein 9 family - - - ko:K11707 ko02010,map02010 M00319 - - ko00000,ko00001,ko00002,ko02000 3.A.1.15 - - ZnuA HSJS2_k127_809207_0 880073.Calab_1772 8.491e-110 375.0 COG1121@1|root,COG1121@2|Bacteria,2NPKC@2323|unclassified Bacteria 2|Bacteria P ATPases associated with a variety of cellular activities mntB - - ko:K09817,ko:K11710 ko02010,map02010 M00242,M00319 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.15,3.A.1.15.3,3.A.1.15.5 - iYO844.BSU30760 ABC_tran HSJS2_k127_809207_2 479434.Sthe_3154 1.217e-19 89.0 COG1108@1|root,COG1108@2|Bacteria,2G5VY@200795|Chloroflexi 200795|Chloroflexi P PFAM ABC-3 protein - - - ko:K11708 ko02010,map02010 M00319 - - ko00000,ko00001,ko00002,ko02000 3.A.1.15 - - ABC-3 HSJS2_k127_81529_0 1379270.AUXF01000003_gene3703 7.063e-226 715.0 COG1217@1|root,COG1217@2|Bacteria,1ZT8A@142182|Gemmatimonadetes 142182|Gemmatimonadetes T Elongation factor G C-terminus - - - ko:K06207 - - - - ko00000 - - - EFG_C,GTP_EFTU,GTP_EFTU_D2 HSJS2_k127_81529_1 716928.AJQT01000114_gene3025 9.655e-158 507.0 COG1879@1|root,COG1879@2|Bacteria,1NRH3@1224|Proteobacteria,2UQ07@28211|Alphaproteobacteria,4BMN7@82115|Rhizobiaceae 28211|Alphaproteobacteria G Periplasmic binding protein domain - - - ko:K02058 - M00221 - - ko00000,ko00002,ko02000 3.A.1.2 - - Peripla_BP_4 HSJS2_k127_81529_2 1121939.L861_20535 1.44e-141 457.0 COG1172@1|root,COG1172@2|Bacteria,1MUDF@1224|Proteobacteria,1RS6Q@1236|Gammaproteobacteria,1XIKQ@135619|Oceanospirillales 135619|Oceanospirillales G Belongs to the binding-protein-dependent transport system permease family - - - ko:K02057 - M00221 - - ko00000,ko00002,ko02000 3.A.1.2 - - BPD_transp_2 HSJS2_k127_81529_3 1101189.AQUO01000001_gene1962 4.431e-126 407.0 COG1129@1|root,COG1129@2|Bacteria,1MW4I@1224|Proteobacteria,2TY4S@28211|Alphaproteobacteria,2PUH7@265|Paracoccus 28211|Alphaproteobacteria G ATPases associated with a variety of cellular activities - - 3.6.3.17 ko:K02056 - M00221 - - ko00000,ko00002,ko01000,ko02000 3.A.1.2 - - ABC_tran HSJS2_k127_81529_4 716928.AJQT01000114_gene3028 6.505e-19 93.0 COG1172@1|root,COG1172@2|Bacteria,1NSB2@1224|Proteobacteria,2UPK8@28211|Alphaproteobacteria,4BCCK@82115|Rhizobiaceae 28211|Alphaproteobacteria G Branched-chain amino acid transport system / permease component - - - ko:K10440 ko02010,map02010 M00212 - - ko00000,ko00001,ko00002,ko02000 3.A.1.2.1,3.A.1.2.13,3.A.1.2.19 - - BPD_transp_2 HSJS2_k127_829285_0 861299.J421_3401 5.939e-85 293.0 COG1185@1|root,COG1185@2|Bacteria,1ZT7C@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction pnp - 2.7.7.8 ko:K00962 ko00230,ko00240,ko03018,map00230,map00240,map03018 M00394 R00437,R00438,R00439,R00440 RC02795 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 - - - KH_1,PNPase,RNase_PH,RNase_PH_C,S1 HSJS2_k127_829285_2 574087.Acear_1592 2.941e-28 121.0 COG0184@1|root,COG0184@2|Bacteria,1VA5C@1239|Firmicutes,24MRM@186801|Clostridia,3WBZV@53433|Halanaerobiales 186801|Clostridia J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome rpsO - - ko:K02956 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S15 HSJS2_k127_829285_1 861299.J421_3191 5.409e-65 229.0 COG0196@1|root,COG0196@2|Bacteria,1ZSM5@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Riboflavin kinase - - 2.7.1.26,2.7.7.2 ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R00161,R00549 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - FAD_syn,Flavokinase HSJS2_k127_865778_6 861299.J421_3456 6.175e-34 139.0 COG0280@1|root,COG0280@2|Bacteria,1ZT01@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Phosphate acetyl/butaryl transferase - - 2.3.1.8 ko:K00625 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 M00357,M00579 R00230,R00921 RC00004,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000 - - - PTA_PTB HSJS2_k127_865778_3 1123392.AQWL01000002_gene2114 1.589e-51 187.0 COG0669@1|root,COG0669@2|Bacteria,1RD9F@1224|Proteobacteria,2VMQQ@28216|Betaproteobacteria,1KRNG@119069|Hydrogenophilales 119069|Hydrogenophilales F Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate coaD - 2.7.7.3 ko:K00954 ko00770,ko01100,map00770,map01100 M00120 R03035 RC00002 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_like HSJS2_k127_865778_5 861299.J421_3458 7.571e-38 149.0 COG0742@1|root,COG0742@2|Bacteria,1ZTVS@142182|Gemmatimonadetes 142182|Gemmatimonadetes L Conserved hypothetical protein 95 - - 2.1.1.171 ko:K08316 - - R07234 RC00003 ko00000,ko01000,ko03009 - - - Cons_hypoth95 HSJS2_k127_865778_1 313596.RB2501_07435 9.023e-124 421.0 COG0608@1|root,COG0608@2|Bacteria,4NDW1@976|Bacteroidetes,1HXAP@117743|Flavobacteriia 976|Bacteroidetes L single-stranded-DNA-specific exonuclease RecJ recJ - - ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DHH,DHHA1 HSJS2_k127_865778_8 643867.Ftrac_3578 6.409e-15 83.0 COG1579@1|root,COG1579@2|Bacteria,4NE36@976|Bacteroidetes,47JBK@768503|Cytophagia 976|Bacteroidetes S Zn-ribbon protein, possibly nucleic acid-binding - - - ko:K07164 - - - - ko00000 - - - zf-RING_7 HSJS2_k127_865778_0 379066.GAU_1891 8.187e-124 419.0 COG0358@1|root,COG0358@2|Bacteria,1ZSTR@142182|Gemmatimonadetes 142182|Gemmatimonadetes L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication dnaG - - ko:K02316 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - DnaB_bind,Toprim_2,Toprim_N,zf-CHC2 HSJS2_k127_865778_2 1121468.AUBR01000015_gene2244 2.153e-112 393.0 COG1193@1|root,COG1193@2|Bacteria,1TP5W@1239|Firmicutes,248YK@186801|Clostridia,42FH2@68295|Thermoanaerobacterales 186801|Clostridia L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity mutS2 - - ko:K07456 ko03430,map03430 - - - ko00000,ko00001,ko03400 - - - MutS_V,Smr HSJS2_k127_865778_4 713586.KB900536_gene189 1.927e-39 155.0 COG0537@1|root,COG0537@2|Bacteria,1RDCJ@1224|Proteobacteria,1S3QE@1236|Gammaproteobacteria,1WYPB@135613|Chromatiales 135613|Chromatiales FG PFAM Histidine triad (HIT) protein - - - ko:K02503 - - - - ko00000,ko04147 - - - DcpS_C,HIT HSJS2_k127_865778_7 1379270.AUXF01000006_gene64 2.623e-30 134.0 COG1385@1|root,COG1385@2|Bacteria,1ZTJ2@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit - - 2.1.1.193 ko:K09761 - - - - ko00000,ko01000,ko03009 - - - Methyltrans_RNA HSJS2_k127_891568_1 861299.J421_3084 4.793e-140 459.0 COG1200@1|root,COG1200@2|Bacteria,1ZT3C@142182|Gemmatimonadetes 142182|Gemmatimonadetes L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) recG - 3.6.4.12 ko:K03655 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C,RecG_wedge HSJS2_k127_891568_0 861299.J421_3089 1.349e-177 574.0 COG0017@1|root,COG0017@2|Bacteria,1ZSTX@142182|Gemmatimonadetes 142182|Gemmatimonadetes J tRNA synthetases class II (D, K and N) asnS - 6.1.1.22 ko:K01893 ko00970,map00970 M00359,M00360 R03648 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_2,tRNA_anti-codon HSJS2_k127_891568_2 861299.J421_4475 9.129e-08 55.0 2CA9X@1|root,2ZJY8@2|Bacteria,1ZU1S@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_892059_4 194439.CT1676 5.856e-07 61.0 COG1663@1|root,COG1663@2|Bacteria,1FDUF@1090|Chlorobi 1090|Chlorobi F Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) lpxK - 2.7.1.130 ko:K00912 ko00540,ko01100,map00540,map01100 M00060 R04657 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko01005 - - - LpxK HSJS2_k127_892059_3 861299.J421_3225 2.057e-32 135.0 COG2121@1|root,COG2121@2|Bacteria,1ZTU5@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Domain of unknown function (DUF374) - - - ko:K09778 - - - - ko00000 - - - DUF374 HSJS2_k127_892059_1 1120985.AUMI01000014_gene771 1.129e-76 270.0 COG0763@1|root,COG0763@2|Bacteria,1TRP4@1239|Firmicutes,4H22C@909932|Negativicutes 909932|Negativicutes M Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell lpxB - 2.4.1.182 ko:K00748 ko00540,ko01100,map00540,map01100 M00060 R04606 RC00005,RC00059 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT19 - LpxB HSJS2_k127_892059_0 379066.GAU_1590 5.927e-77 274.0 COG0673@1|root,COG0673@2|Bacteria,1ZTES@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA HSJS2_k127_892059_2 1125863.JAFN01000001_gene3412 1.219e-73 254.0 COG1043@1|root,COG1043@2|Bacteria,1MUHQ@1224|Proteobacteria,42NPG@68525|delta/epsilon subdivisions,2WJVP@28221|Deltaproteobacteria 28221|Deltaproteobacteria M Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell lpxA - 2.3.1.129 ko:K00677 ko00540,ko01100,ko01503,map00540,map01100,map01503 M00060 R04567 RC00039,RC00055 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Acetyltransf_11,Hexapep HSJS2_k127_92626_3 1121405.dsmv_1073 2.004e-06 59.0 COG0658@1|root,COG2333@1|root,COG0658@2|Bacteria,COG2333@2|Bacteria,1MUKF@1224|Proteobacteria,42N3S@68525|delta/epsilon subdivisions,2WJ5P@28221|Deltaproteobacteria,2MI3T@213118|Desulfobacterales 28221|Deltaproteobacteria S DNA internalization-related competence protein ComEC Rec2 - - - ko:K02238 - M00429 - - ko00000,ko00002,ko02044 3.A.11.1,3.A.11.2 - - Competence,DUF4131,Lactamase_B HSJS2_k127_92626_0 379066.GAU_1454 4.874e-138 453.0 COG0621@1|root,COG0621@2|Bacteria,1ZT0Z@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine miaB - 2.8.4.3 ko:K06168 - - R10645,R10646,R10647 RC00003,RC00980,RC03221,RC03222 ko00000,ko01000,ko03016 - - - Radical_SAM,TRAM,UPF0004 HSJS2_k127_92626_4 1415780.JPOG01000001_gene2468 5.176e-06 57.0 COG2267@1|root,COG2267@2|Bacteria,1QTAP@1224|Proteobacteria,1S6CX@1236|Gammaproteobacteria,1XDA2@135614|Xanthomonadales 135614|Xanthomonadales I Serine aminopeptidase, S33 - - - - - - - - - - - - Abhydrolase_1,Abhydrolase_6 HSJS2_k127_92626_1 1379270.AUXF01000005_gene707 1.231e-10 74.0 2EYUI@1|root,33S1Q@2|Bacteria,1ZTHR@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_92626_2 861299.J421_3096 9.875e-09 63.0 2F0K0@1|root,33TNP@2|Bacteria,1ZTJU@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - HSJS2_k127_95406_7 379066.GAU_2624 0.0008996 43.0 COG1225@1|root,COG1225@2|Bacteria,1ZUGC@142182|Gemmatimonadetes 142182|Gemmatimonadetes O Redoxin - - - - - - - - - - - - AhpC-TSA HSJS2_k127_95406_4 1379270.AUXF01000001_gene2770 2.725e-22 100.0 COG1225@1|root,COG1225@2|Bacteria 2|Bacteria O peroxiredoxin activity - - 1.11.1.15 ko:K03564 - - - - ko00000,ko01000 - - - AhpC-TSA HSJS2_k127_95406_3 861299.J421_1716 7.62e-35 140.0 COG0526@1|root,COG0526@2|Bacteria,1ZTV9@142182|Gemmatimonadetes 142182|Gemmatimonadetes CO Thioredoxin-like - - - - - - - - - - - - AhpC-TSA HSJS2_k127_95406_1 861299.J421_1717 4.729e-59 215.0 COG4232@1|root,COG4232@2|Bacteria,1ZSQP@142182|Gemmatimonadetes 142182|Gemmatimonadetes CO Cytochrome C biogenesis protein transmembrane region - - 1.8.1.8 ko:K04084 - - - - ko00000,ko01000,ko03110 5.A.1.1 - - DsbD HSJS2_k127_95406_5 290317.Cpha266_0471 2.624e-07 57.0 COG0727@1|root,COG0727@2|Bacteria 2|Bacteria S metal cluster binding - - - ko:K06940 - - - - ko00000 - - - CxxCxxCC HSJS2_k127_95406_0 649638.Trad_2970 2.025e-155 507.0 COG0534@1|root,COG0534@2|Bacteria,1WMCE@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus V COGs COG0534 Na -driven multidrug efflux pump - - - ko:K03327 - - - - ko00000,ko02000 2.A.66.1 - - MatE HSJS2_k127_95406_2 713586.KB900536_gene2091 1.311e-41 166.0 COG3019@1|root,COG3019@2|Bacteria,1MZ9V@1224|Proteobacteria,1S9CQ@1236|Gammaproteobacteria,1WZ4Y@135613|Chromatiales 135613|Chromatiales S Protein of unknown function, DUF - - - - - - - - - - - - DUF411 HSJS2_k127_95406_6 234267.Acid_6293 8.409e-06 48.0 COG1846@1|root,COG1846@2|Bacteria,3Y861@57723|Acidobacteria 57723|Acidobacteria K Winged helix DNA-binding domain - - - - - - - - - - - - HTH_34 HSJS2_k127_954307_2 1120985.AUMI01000014_gene1191 3.488e-05 50.0 COG0337@1|root,COG0337@2|Bacteria,1TPKZ@1239|Firmicutes,4H2Y4@909932|Negativicutes 909932|Negativicutes E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) aroB - 4.2.3.4 ko:K01735 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R03083 RC00847 ko00000,ko00001,ko00002,ko01000 - - - DHQ_synthase HSJS2_k127_954307_0 861299.J421_2604 4.467e-134 450.0 COG0318@1|root,COG0318@2|Bacteria,1ZSXP@142182|Gemmatimonadetes 142182|Gemmatimonadetes IQ AMP-binding enzyme C-terminal domain - - - ko:K00666 - - - - ko00000,ko01000,ko01004 - - - AMP-binding,AMP-binding_C HSJS2_k127_954307_1 1379270.AUXF01000004_gene3227 7.83e-103 360.0 COG1432@1|root,COG1432@2|Bacteria,1ZSRW@142182|Gemmatimonadetes 142182|Gemmatimonadetes S OST-HTH/LOTUS domain - - - - - - - - - - - - NYN,OST-HTH HSJS2_k127_954307_3 1128398.Curi_c12270 0.0003881 44.0 COG2094@1|root,COG2094@2|Bacteria,1V1E6@1239|Firmicutes,24FRV@186801|Clostridia,2696R@186813|unclassified Clostridiales 186801|Clostridia L Methylpurine-DNA glycosylase (MPG) - - 3.2.2.21 ko:K03652 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Pur_DNA_glyco HSJS2_k127_986038_0 287986.DV20_00500 1.813e-33 145.0 COG1131@1|root,COG1131@2|Bacteria,2GIY8@201174|Actinobacteria,4DXJD@85010|Pseudonocardiales 201174|Actinobacteria V Daunorubicin resistance ABC transporter ATP-binding subunit - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran,DUF4162 HSJS2_k127_986038_3 1089550.ATTH01000001_gene1930 1.454e-10 71.0 COG1141@1|root,COG1141@2|Bacteria,4PF9R@976|Bacteroidetes,1FKC0@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes C 4Fe-4S single cluster domain of Ferredoxin I - - - - - - - - - - - - - HSJS2_k127_986038_1 1131269.AQVV01000011_gene2523 2.247e-26 113.0 COG0489@1|root,COG0489@2|Bacteria 2|Bacteria D protein tyrosine kinase activity - - - ko:K03593 - - - - ko00000,ko03029,ko03036 - - - ParA ## 1470 queries scanned ## Total time (seconds): 182.84322714805603 ## Rate: 8.04 q/s