## Sat Nov 16 13:42:37 2024
## emapper-2.1.12
## /data/home/zkh/miniconda3/envs/eggnog-mapper/bin/emapper.py -i /data/home/zkh/binning/bin_4635/bin/bin14/MMGS_2_bin.35.fa -m mmseqs --itype genome -o MMGS_2_bin.35 --output_dir /data/home/zkh/meta_analysis/eggnog-mapper/4635/MMGS_2_bin.35 --cpu 28
##
#query	seed_ortholog	evalue	score	eggNOG_OGs	max_annot_lvl	COG_category	Description	Preferred_name	GOs	EC	KEGG_ko	KEGG_Pathway	KEGG_Module	KEGG_Reaction	KEGG_rclass	BRITE	KEGG_TC	CAZy	BiGG_Reaction	PFAMs
MMGS2_k127_109064_0	765952.PUV_22380	5.261e-200	635.0	COG0821@1|root,COG0821@2|Bacteria,2JFII@204428|Chlamydiae	204428|Chlamydiae	I	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate	ispG	-	1.17.7.1,1.17.7.3	ko:K03526	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R08689,R10859	RC01486	ko00000,ko00001,ko00002,ko01000	-	-	-	GcpE
MMGS2_k127_1168_1	1444711.CCJF01000004_gene2189	1.255e-36	146.0	COG1011@1|root,COG1011@2|Bacteria,2JGEH@204428|Chlamydiae	204428|Chlamydiae	S	Haloacid dehalogenase-like hydrolase	-	-	-	ko:K07025	-	-	-	-	ko00000	-	-	-	HAD_2
MMGS2_k127_1201006_0	331113.SNE_A05450	2.106e-180	573.0	COG0172@1|root,COG0172@2|Bacteria,2JFDJ@204428|Chlamydiae	204428|Chlamydiae	J	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)	serS	-	6.1.1.11	ko:K01875	ko00970,map00970	M00359,M00360	R03662,R08218	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Seryl_tRNA_N,tRNA-synt_2b
MMGS2_k127_1201006_2	1321778.HMPREF1982_00173	1.464e-76	271.0	COG0477@1|root,COG2814@2|Bacteria,1TS6K@1239|Firmicutes,24AKU@186801|Clostridia	186801|Clostridia	EGP	Major Facilitator	-	-	-	ko:K08153	-	M00717	-	-	ko00000,ko00002,ko02000	2.A.1.2.8	-	-	MFS_1,Sugar_tr
MMGS2_k127_1201006_1	331113.SNE_A05460	1.461e-145	469.0	28K7C@1|root,2Z9VH@2|Bacteria,2JFID@204428|Chlamydiae	204428|Chlamydiae	S	Uncharacterised protein family (UPF0158)	CP_0235	-	-	-	-	-	-	-	-	-	-	-	UPF0158
MMGS2_k127_1201006_3	331113.SNE_A05470	8.504e-21	94.0	COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,2JFWU@204428|Chlamydiae	204428|Chlamydiae	C	2-oxoisovalerate dehydrogenase, e1 component, alpha and beta subunit	CP_0743	-	1.2.4.4	ko:K00167,ko:K11381	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	M00036	R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997	RC00027,RC00627,RC02743,RC02883,RC02949,RC02953	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	E1_dh,Transket_pyr,Transketolase_C
MMGS2_k127_1221656_4	1444711.CCJF01000005_gene247	1.46e-50	184.0	COG3880@1|root,COG3880@2|Bacteria,2JG5I@204428|Chlamydiae	204428|Chlamydiae	S	UvrB/uvrC motif	-	-	-	ko:K19411	-	-	-	-	ko00000	-	-	-	UVR
MMGS2_k127_1221656_5	596152.DesU5LDRAFT_2040	1.267e-15	79.0	2E4YG@1|root,32ZSB@2|Bacteria,1N74T@1224|Proteobacteria,42XBI@68525|delta/epsilon subdivisions,2WSNB@28221|Deltaproteobacteria,2MD29@213115|Desulfovibrionales	28221|Deltaproteobacteria	S	Protein of unknown function (DUF3309)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3309
MMGS2_k127_1221656_3	331113.SNE_A02490	5.139e-57	209.0	COG1266@1|root,COG1266@2|Bacteria,2JHB5@204428|Chlamydiae	204428|Chlamydiae	S	CAAX protease self-immunity	-	-	-	ko:K07052	-	-	-	-	ko00000	-	-	-	Abi
MMGS2_k127_1221656_1	1444711.CCJF01000005_gene242	3.184e-74	258.0	COG1496@1|root,COG1496@2|Bacteria,2JG1Z@204428|Chlamydiae	204428|Chlamydiae	S	Multi-copper polyphenol oxidoreductase laccase	-	-	-	ko:K05810	-	-	-	-	ko00000,ko01000	-	-	-	Cu-oxidase_4
MMGS2_k127_1221656_2	673862.BABL1_141	2.823e-59	221.0	COG0707@1|root,COG0707@2|Bacteria,1QU89@1224|Proteobacteria	1224|Proteobacteria	M	UDP-N-acetylglucosamine LPS N-acetylglucosamine transferase	-	-	2.4.1.315,2.4.1.46	ko:K03429,ko:K03715	ko00561,ko01100,map00561,map01100	-	R02689,R02691,R04377	RC00005,RC00059	ko00000,ko00001,ko01000,ko01003	-	GT28	-	Glyco_tran_28_C,MGDG_synth
MMGS2_k127_1221656_0	402777.KB235903_gene1681	4.954e-84	290.0	COG1506@1|root,COG1506@2|Bacteria,1G200@1117|Cyanobacteria,1H8T3@1150|Oscillatoriales	1117|Cyanobacteria	E	PFAM Prolyl oligopeptidase family	dap2	-	-	-	-	-	-	-	-	-	-	-	PD40,Peptidase_S9
MMGS2_k127_122553_3	1041146.ATZB01000001_gene4791	0.0001959	44.0	COG0454@1|root,COG0456@2|Bacteria,1RHUD@1224|Proteobacteria,2UJA3@28211|Alphaproteobacteria,4BBR9@82115|Rhizobiaceae	28211|Alphaproteobacteria	K	Acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
MMGS2_k127_122553_1	1123376.AUIU01000003_gene1644	9.526e-78	268.0	COG1476@1|root,COG1476@2|Bacteria	2|Bacteria	K	sequence-specific DNA binding	xre	-	-	-	-	-	-	-	-	-	-	-	HTH_3
MMGS2_k127_122553_2	1047013.AQSP01000142_gene217	3.336e-30	123.0	2EDCN@1|root,3378Z@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_122553_0	1123253.AUBD01000006_gene776	1.779e-126	413.0	COG3943@1|root,COG3943@2|Bacteria,1MWKW@1224|Proteobacteria,1RPNB@1236|Gammaproteobacteria,1X5PX@135614|Xanthomonadales	135614|Xanthomonadales	S	Virulence protein RhuM family	-	-	-	-	-	-	-	-	-	-	-	-	Virulence_RhuM
MMGS2_k127_1272031_3	331113.SNE_A16470	9.125e-38	145.0	2CD1E@1|root,2ZB0F@2|Bacteria,2JFU1@204428|Chlamydiae	204428|Chlamydiae	S	Bacterial SH3 domain homologues	CP_0670	-	-	-	-	-	-	-	-	-	-	-	SH3_3
MMGS2_k127_1272031_1	1444711.CCJF01000004_gene2068	1.271e-95	319.0	COG2833@1|root,COG2833@2|Bacteria,2JFXC@204428|Chlamydiae	204428|Chlamydiae	S	Protein of unknown function (DUF455)	-	-	-	-	-	-	-	-	-	-	-	-	DUF455
MMGS2_k127_1272031_0	331113.SNE_A16520	8.617e-147	476.0	COG1322@1|root,COG1322@2|Bacteria,2JFJ6@204428|Chlamydiae	204428|Chlamydiae	S	DNA recombination protein RmuC homolog	rmuC	-	-	ko:K09760	-	-	-	-	ko00000	-	-	-	RmuC
MMGS2_k127_1272031_2	331113.SNE_A16540	8.214e-84	287.0	COG1183@1|root,COG1183@2|Bacteria,2JFMU@204428|Chlamydiae	204428|Chlamydiae	I	Belongs to the CDP-alcohol phosphatidyltransferase class-I family	pssA	-	2.7.8.8	ko:K17103	ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110	M00093	R01800	RC00002,RC00017,RC02795	ko00000,ko00001,ko00002,ko01000	-	-	-	CDP-OH_P_transf
MMGS2_k127_1310270_3	1238182.C882_2167	2.042e-47	179.0	COG1432@1|root,COG1432@2|Bacteria,1MZIU@1224|Proteobacteria,2UEX0@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	NYN domain	-	-	-	-	-	-	-	-	-	-	-	-	NYN
MMGS2_k127_1310270_0	331113.SNE_A08020	1.138e-263	827.0	COG1132@1|root,COG1132@2|Bacteria,2JFRB@204428|Chlamydiae	204428|Chlamydiae	V	Lipid A export ATP-binding permease protein	msbA	-	-	ko:K02021,ko:K06147,ko:K06148	-	-	-	-	ko00000,ko02000	3.A.1,3.A.1.106,3.A.1.109,3.A.1.110,3.A.1.112,3.A.1.113,3.A.1.117,3.A.1.21	-	-	ABC_membrane,ABC_tran
MMGS2_k127_1310270_2	331113.SNE_A08010	5.476e-141	453.0	COG0825@1|root,COG0825@2|Bacteria,2JFES@204428|Chlamydiae	204428|Chlamydiae	I	Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA	accA	-	2.1.3.15,6.4.1.2	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742,R04386	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	ACCA
MMGS2_k127_1310270_4	716544.wcw_1333	6.941e-43	159.0	COG0776@1|root,COG0776@2|Bacteria,2JG67@204428|Chlamydiae	204428|Chlamydiae	L	Belongs to the bacterial histone-like protein family	ihfA	-	-	-	-	-	-	-	-	-	-	-	Bac_DNA_binding
MMGS2_k127_1310270_1	331113.SNE_A07970	1.957e-166	533.0	COG0162@1|root,COG0162@2|Bacteria,2JFHY@204428|Chlamydiae	204428|Chlamydiae	J	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)	tyrS	-	6.1.1.1	ko:K01866	ko00970,map00970	M00359,M00360	R02918	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	S4,tRNA-synt_1b
MMGS2_k127_1345169_3	68223.JNZY01000044_gene5931	1.486e-17	92.0	COG3209@1|root,COG3209@2|Bacteria,2GK1D@201174|Actinobacteria	201174|Actinobacteria	M	TIGRFAM YD repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	PT-HINT,RHS_repeat,SpvB
MMGS2_k127_1345169_1	765952.PUV_24920	1.3e-31	133.0	COG3209@1|root,COG3209@2|Bacteria,2JFH5@204428|Chlamydiae	204428|Chlamydiae	M	Rhs family	rhs1	-	-	-	-	-	-	-	-	-	-	-	DUF687,RHS_repeat
MMGS2_k127_1345169_2	1444712.BN1013_00668	4.983e-25	113.0	COG1051@1|root,COG1051@2|Bacteria	2|Bacteria	F	GDP-mannose mannosyl hydrolase activity	-	-	3.6.1.13,3.6.1.55,3.6.1.67	ko:K01515,ko:K03574,ko:K08310,ko:K19965	ko00230,ko00790,map00230,map00790	M00126	R01054,R04638	RC00002	ko00000,ko00001,ko00002,ko01000,ko03400	-	-	-	NUDIX
MMGS2_k127_1345169_0	1408445.JHXP01000025_gene524	9.626e-108	359.0	COG0488@1|root,COG0488@2|Bacteria,1MU37@1224|Proteobacteria,1RPN9@1236|Gammaproteobacteria,1JC58@118969|Legionellales	118969|Legionellales	S	ABC transporter	yheS_2	-	-	-	-	-	-	-	-	-	-	-	ABC_tran,ABC_tran_Xtn
MMGS2_k127_1345169_4	640081.Dsui_0753	1.707e-15	79.0	COG0488@1|root,COG0488@2|Bacteria,1MU37@1224|Proteobacteria,2VHGH@28216|Betaproteobacteria,2KUDD@206389|Rhodocyclales	206389|Rhodocyclales	S	of ABC transporters with duplicated ATPase	ybiT	-	-	-	-	-	-	-	-	-	-	-	ABC_tran,ABC_tran_Xtn
MMGS2_k127_135040_6	472759.Nhal_3484	7.727e-20	91.0	COG4118@1|root,COG4118@2|Bacteria	2|Bacteria	D	positive regulation of growth	-	-	-	-	-	-	-	-	-	-	-	-	PhdYeFM_antitox
MMGS2_k127_135040_4	56107.Cylst_0149	4.12e-28	118.0	COG3744@1|root,COG3744@2|Bacteria,1G5PR@1117|Cyanobacteria,1HSI7@1161|Nostocales	1117|Cyanobacteria	S	PIN domain	-	-	-	-	-	-	-	-	-	-	-	-	PIN
MMGS2_k127_135040_1	331113.SNE_A14130	6.565e-289	899.0	COG1217@1|root,COG1217@2|Bacteria,2JFS9@204428|Chlamydiae	204428|Chlamydiae	T	Elongation factor G C-terminus	typA	-	-	ko:K06207	-	-	-	-	ko00000	-	-	-	EFG_C,GTP_EFTU,GTP_EFTU_D2
MMGS2_k127_135040_2	1444711.CCJF01000005_gene1190	7.553e-168	540.0	COG2239@1|root,COG2239@2|Bacteria,2JFJ8@204428|Chlamydiae	204428|Chlamydiae	P	Acts as a magnesium transporter	-	-	-	ko:K06213	-	-	-	-	ko00000,ko02000	1.A.26.1	-	-	CBS,MgtE,MgtE_N
MMGS2_k127_135040_5	1444712.BN1013_02303	1.803e-27	115.0	COG5512@1|root,COG5512@2|Bacteria,2JGEC@204428|Chlamydiae	204428|Chlamydiae	S	Protein of unknown function (DUF721)	-	-	-	-	-	-	-	-	-	-	-	-	DUF721
MMGS2_k127_135040_0	331113.SNE_A14110	0.0	1189.0	COG0187@1|root,COG0187@2|Bacteria,2JFF2@204428|Chlamydiae	204428|Chlamydiae	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	gyrB	-	5.99.1.3	ko:K02470	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim
MMGS2_k127_135040_3	331113.SNE_A14100	2.302e-157	499.0	COG0188@1|root,COG0188@2|Bacteria,2JFMG@204428|Chlamydiae	204428|Chlamydiae	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	gyrA	-	5.99.1.3	ko:K02469	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	DNA_gyraseA_C,DNA_topoisoIV
MMGS2_k127_135258_6	331113.SNE_A06880	0.0004132	44.0	COG0697@1|root,COG0697@2|Bacteria,2JFTJ@204428|Chlamydiae	204428|Chlamydiae	EG	Permeases of the drug metabolite transporter (DMT) superfamily	CP_1064	-	-	-	-	-	-	-	-	-	-	-	EamA
MMGS2_k127_135258_1	765952.PUV_14460	2.329e-125	409.0	COG0039@1|root,COG0039@2|Bacteria,2JFTH@204428|Chlamydiae	204428|Chlamydiae	C	Catalyzes the reversible oxidation of malate to oxaloacetate	mdh	-	1.1.1.37	ko:K00024	ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00012,M00168,M00173,M00346,M00374,M00620,M00740	R00342,R07136	RC00031	ko00000,ko00001,ko00002,ko01000	-	-	-	Ldh_1_C,Ldh_1_N
MMGS2_k127_135258_2	331113.SNE_A07060	2.992e-80	275.0	28JQF@1|root,2Z9GB@2|Bacteria,2JFW5@204428|Chlamydiae	204428|Chlamydiae	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_135258_4	331113.SNE_A07070	8.167e-56	207.0	COG0665@1|root,COG0665@2|Bacteria,2JG6M@204428|Chlamydiae	204428|Chlamydiae	E	Oxidoreductase	CP_0822	-	-	-	-	-	-	-	-	-	-	-	DAO
MMGS2_k127_135258_3	765952.PUV_14920	2.199e-78	273.0	COG1235@1|root,COG1235@2|Bacteria,2JFXZ@204428|Chlamydiae	204428|Chlamydiae	S	Metallo-beta-lactamase superfamily	phnP	-	3.1.4.55	ko:K06167	ko00440,map00440	-	R10205	RC00296	ko00000,ko00001,ko01000	-	-	-	Lactamase_B_2
MMGS2_k127_135258_0	331113.SNE_A07090	1.544e-162	522.0	COG2262@1|root,COG2262@2|Bacteria,2JFSR@204428|Chlamydiae	204428|Chlamydiae	S	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis	hflX	-	-	ko:K03665	-	-	-	-	ko00000,ko03009	-	-	-	GTP-bdg_M,GTP-bdg_N,MMR_HSR1
MMGS2_k127_135258_5	331113.SNE_A07100	1.081e-50	188.0	COG2003@1|root,COG2003@2|Bacteria,2JFYH@204428|Chlamydiae	204428|Chlamydiae	L	RadC-like JAB domain	radC	-	-	ko:K03630	-	-	-	-	ko00000	-	-	-	RadC
MMGS2_k127_139523_1	331113.SNE_A04550	3.626e-72	251.0	COG0095@1|root,COG0095@2|Bacteria,2JG15@204428|Chlamydiae	204428|Chlamydiae	H	Biotin/lipoate A/B protein ligase family	lplA_1	-	6.3.1.20	ko:K03800	ko00785,ko01100,map00785,map01100	-	R07770,R07771,R11143	RC00043,RC00070,RC00090,RC00992,RC02896	ko00000,ko00001,ko01000	-	-	-	BPL_LplA_LipB
MMGS2_k127_139523_0	331113.SNE_A04620	2.632e-111	363.0	COG0442@1|root,COG0442@2|Bacteria,2JFHZ@204428|Chlamydiae	204428|Chlamydiae	J	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro)	proS	-	6.1.1.15	ko:K01881	ko00970,map00970	M00359,M00360	R03661	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,ProRS-C_1,tRNA-synt_2b
MMGS2_k127_1506400_2	716544.wcw_1670	1.47e-52	191.0	COG1108@1|root,COG1108@2|Bacteria,2JFM1@204428|Chlamydiae	204428|Chlamydiae	P	transport system membrane protein	ytgD	-	-	ko:K11709	ko02010,map02010	M00319	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.15	-	-	ABC-3
MMGS2_k127_1506400_1	331113.SNE_A05160	5.211e-137	445.0	COG0743@1|root,COG0743@2|Bacteria,2JFM0@204428|Chlamydiae	204428|Chlamydiae	I	Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)	dxr	-	1.1.1.267	ko:K00099	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05688	RC01452	ko00000,ko00001,ko00002,ko01000	-	-	-	DXPR_C,DXP_redisom_C,DXP_reductoisom
MMGS2_k127_1506400_0	331113.SNE_A05170	8.154e-140	460.0	COG0750@1|root,COG0793@1|root,COG0750@2|Bacteria,COG0793@2|Bacteria,2JFMQ@204428|Chlamydiae	204428|Chlamydiae	M	zinc metalloprotease	rseP	-	-	ko:K11749	ko02024,ko04112,map02024,map04112	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_M50
MMGS2_k127_1573592_3	765952.PUV_20700	5.89e-22	96.0	COG0537@1|root,COG0537@2|Bacteria,2JG6G@204428|Chlamydiae	204428|Chlamydiae	FG	catalytic activity	CP_0266	-	-	-	-	-	-	-	-	-	-	-	HIT
MMGS2_k127_1573592_1	1444712.BN1013_00792	4.058e-116	380.0	COG4286@1|root,COG4286@2|Bacteria,2JFGF@204428|Chlamydiae	204428|Chlamydiae	S	conserved protein related to MYG1 family	CP_0265	-	-	-	-	-	-	-	-	-	-	-	UPF0160
MMGS2_k127_1573592_0	1444711.CCJF01000004_gene2214	3.27e-265	833.0	COG1611@1|root,COG1611@2|Bacteria,2JFEZ@204428|Chlamydiae	204428|Chlamydiae	S	Belongs to the LOG family	-	-	3.2.2.10	ko:K06966	ko00230,ko00240,map00230,map00240	-	R00182,R00510	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	-
MMGS2_k127_1573592_2	331113.SNE_A15330	4.444e-74	254.0	2DM90@1|root,327AV@2|Bacteria,2JGUS@204428|Chlamydiae	204428|Chlamydiae	S	Protein of unknown function (DUF1207)	CP_0263	-	-	-	-	-	-	-	-	-	-	-	DUF1207
MMGS2_k127_1632691_1	1121406.JAEX01000005_gene3086	9.873e-42	160.0	COG0253@1|root,COG0253@2|Bacteria,1MWDH@1224|Proteobacteria,42MRX@68525|delta/epsilon subdivisions,2WMP4@28221|Deltaproteobacteria,2M99K@213115|Desulfovibrionales	28221|Deltaproteobacteria	E	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan	dapF	-	5.1.1.7	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00527	R02735	RC00302	ko00000,ko00001,ko00002,ko01000	-	-	-	DAP_epimerase
MMGS2_k127_1632691_0	331113.SNE_A20230	2.147e-253	801.0	COG0553@1|root,COG0553@2|Bacteria,2JFGJ@204428|Chlamydiae	204428|Chlamydiae	KL	SNF2 family N-terminal domain	CP_1034	-	-	-	-	-	-	-	-	-	-	-	Helicase_C,SNF2_N,SWIM
MMGS2_k127_1632691_2	331113.SNE_A12700	1.533e-14	76.0	COG1373@1|root,COG1373@2|Bacteria,2JH9D@204428|Chlamydiae	204428|Chlamydiae	S	Domain of unknown function (DUF4143)	-	-	-	ko:K07133	-	-	-	-	ko00000	-	-	-	DUF4143
MMGS2_k127_1658432_2	1033739.CAEU01000005_gene1219	1.764e-08	59.0	COG1388@1|root,COG1705@1|root,COG1388@2|Bacteria,COG1705@2|Bacteria,1UYRM@1239|Firmicutes,4HAU6@91061|Bacilli,26H58@186818|Planococcaceae	91061|Bacilli	MNU	Lysozyme subfamily 2	acmA	GO:0005575,GO:0005576	-	ko:K02395,ko:K19220,ko:K19223	-	-	-	-	ko00000,ko01000,ko01002,ko01011,ko02035	-	CBM50	-	Glucosaminidase,LysM
MMGS2_k127_1658432_1	1444712.BN1013_00330	7.613e-51	191.0	COG0796@1|root,COG0796@2|Bacteria,2JG0N@204428|Chlamydiae	204428|Chlamydiae	M	Provides the (R)-glutamate required for cell wall biosynthesis	murI	-	5.1.1.3	ko:K01776	ko00471,ko01100,map00471,map01100	-	R00260	RC00302	ko00000,ko00001,ko01000,ko01011	-	-	-	Asp_Glu_race
MMGS2_k127_1658432_0	1444712.BN1013_01832	6.505e-143	474.0	COG0513@1|root,COG0513@2|Bacteria,2JFPJ@204428|Chlamydiae	204428|Chlamydiae	L	Belongs to the DEAD box helicase family	-	-	3.6.4.13	ko:K05592	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03009,ko03019	-	-	-	DEAD,Helicase_C
MMGS2_k127_1670403_1	765952.PUV_09540	2.534e-12	68.0	COG4974@1|root,COG4974@2|Bacteria,2JHB9@204428|Chlamydiae	204428|Chlamydiae	L	IS66 C-terminal element	-	-	-	-	-	-	-	-	-	-	-	-	DDE_Tnp_IS66_C
MMGS2_k127_1670403_0	765952.PUV_09540	1.313e-109	368.0	COG4974@1|root,COG4974@2|Bacteria,2JHB9@204428|Chlamydiae	204428|Chlamydiae	L	IS66 C-terminal element	-	-	-	-	-	-	-	-	-	-	-	-	DDE_Tnp_IS66_C
MMGS2_k127_1670403_2	1437425.CSEC_1429	3.587e-12	73.0	2C8C3@1|root,3442Q@2|Bacteria,2JH7Y@204428|Chlamydiae	204428|Chlamydiae	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_1671776_0	1444711.CCJF01000005_gene359	9.188e-84	279.0	COG0488@1|root,COG0488@2|Bacteria,2JFNM@204428|Chlamydiae	204428|Chlamydiae	S	ATPase components of various ABC-type transport systems, contain duplicated ATPase	-	-	-	ko:K06158	-	-	-	-	ko00000,ko03012	-	-	-	ABC_tran,ABC_tran_Xtn
MMGS2_k127_1671776_1	1437425.CSEC_1313	2.382e-52	186.0	COG5340@1|root,COG5340@2|Bacteria,2JH3Y@204428|Chlamydiae	204428|Chlamydiae	K	Psort location Cytoplasmic, score	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_1676856_1	220341.16505640	4.347e-10	63.0	COG0732@1|root,COG0732@2|Bacteria,1MXVH@1224|Proteobacteria,1S29W@1236|Gammaproteobacteria,3ZMV8@590|Salmonella	1236|Gammaproteobacteria	V	Type I restriction modification DNA specificity domain	hsdS	-	3.1.21.3	ko:K01154	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	Methylase_S
MMGS2_k127_1676856_0	760192.Halhy_2547	1.396e-137	447.0	COG5433@1|root,COG5433@2|Bacteria,4NHJC@976|Bacteroidetes,1IPH8@117747|Sphingobacteriia	976|Bacteroidetes	L	PFAM Transposase DDE domain	-	-	-	-	-	-	-	-	-	-	-	-	DDE_Tnp_1,DDE_Tnp_1_assoc
MMGS2_k127_1743554_1	765952.PUV_20980	9.934e-101	332.0	COG1064@1|root,COG1064@2|Bacteria,2JFPF@204428|Chlamydiae	204428|Chlamydiae	C	Zinc-binding dehydrogenase	-	-	-	ko:K13979	-	-	-	-	ko00000,ko01000	-	-	-	ADH_N,ADH_zinc_N
MMGS2_k127_1743554_2	1444712.BN1013_01232	2.862e-80	273.0	COG0580@1|root,COG0580@2|Bacteria,2JGJ6@204428|Chlamydiae	204428|Chlamydiae	U	Belongs to the MIP aquaporin (TC 1.A.8) family	-	-	-	-	-	-	-	-	-	-	-	-	MIP
MMGS2_k127_1743554_4	1444711.CCJF01000005_gene1417	1.646e-34	135.0	2BVXR@1|root,32IG2@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DoxX
MMGS2_k127_1743554_0	1163617.SCD_n00704	0.0	1300.0	COG3957@1|root,COG3957@2|Bacteria,1MVSE@1224|Proteobacteria,2VIGM@28216|Betaproteobacteria	28216|Betaproteobacteria	G	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase	xfp	-	4.1.2.22,4.1.2.9	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120	-	R00761,R01621	RC00032,RC00226	ko00000,ko00001,ko01000	-	-	-	XFP,XFP_C,XFP_N
MMGS2_k127_1743554_3	247490.KSU1_D0011	4.237e-69	241.0	COG1273@1|root,COG1273@2|Bacteria,2J4I3@203682|Planctomycetes	203682|Planctomycetes	S	Ku70/Ku80 beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	Ku
MMGS2_k127_1756216_4	218497.CAB192	3.241e-30	122.0	COG0261@1|root,COG0261@2|Bacteria,2JGD4@204428|Chlamydiae	204428|Chlamydiae	J	This protein binds to 23S rRNA in the presence of protein L20	rplU	-	-	ko:K02888	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L21p
MMGS2_k127_1756216_3	1229831.M832_00320	2.04e-34	133.0	COG0211@1|root,COG0211@2|Bacteria,2JG9Q@204428|Chlamydiae	204428|Chlamydiae	J	Belongs to the bacterial ribosomal protein bL27 family	rpmA	-	-	ko:K02899	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L27
MMGS2_k127_1756216_0	331113.SNE_A03460	1.7e-127	417.0	COG0536@1|root,COG0536@2|Bacteria,2JFKD@204428|Chlamydiae	204428|Chlamydiae	S	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control	obg	GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0043021,GO:0043022,GO:0044424,GO:0044464,GO:0044877	-	ko:K03979	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	GTP1_OBG,MMR_HSR1
MMGS2_k127_1756216_1	765952.PUV_07300	1.639e-59	215.0	COG1864@1|root,COG1864@2|Bacteria,2JGAB@204428|Chlamydiae	204428|Chlamydiae	F	DNA/RNA non-specific endonuclease	-	-	-	ko:K01173	ko04210,map04210	-	-	-	ko00000,ko00001,ko03029	-	-	-	Endonuclease_NS
MMGS2_k127_1756216_2	765952.PUV_25230	1.395e-34	137.0	COG2865@1|root,COG2865@2|Bacteria	2|Bacteria	-	-	-	-	3.6.4.12	ko:K03655	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	AlbA_2,HATPase_c_4
MMGS2_k127_175860_2	1444711.CCJF01000005_gene415	5.625e-25	107.0	COG0563@1|root,COG0563@2|Bacteria	2|Bacteria	F	adenylate kinase activity	adk	-	2.7.4.3	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	M00049	R00127,R01547,R11319	RC00002	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	AAA_18,ADK,ADK_lid
MMGS2_k127_175860_0	765952.PUV_09390	2.419e-129	417.0	COG1028@1|root,COG1028@2|Bacteria,2JGTQ@204428|Chlamydiae	204428|Chlamydiae	C	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
MMGS2_k127_175860_1	658187.LDG_7093	2.76e-79	272.0	COG0500@1|root,COG2226@2|Bacteria,1R5JA@1224|Proteobacteria,1T4YK@1236|Gammaproteobacteria	1236|Gammaproteobacteria	Q	ubiE/COQ5 methyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25
MMGS2_k127_1765444_3	522772.Dacet_0308	1.869e-12	69.0	2DNS1@1|root,32YVX@2|Bacteria,2GG1X@200930|Deferribacteres	200930|Deferribacteres	S	Protein of unknown function (DUF2905)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2905
MMGS2_k127_1765444_0	264201.pc0843	3.076e-98	334.0	COG0860@1|root,COG0860@2|Bacteria,2JGVI@204428|Chlamydiae	204428|Chlamydiae	M	N-acetylmuramoyl-L-alanine amidase	-	-	-	-	-	-	-	-	-	-	-	-	Amidase_3
MMGS2_k127_1765444_1	331113.SNE_A06310	4.742e-76	261.0	COG0563@1|root,COG0563@2|Bacteria,2JG11@204428|Chlamydiae	204428|Chlamydiae	F	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism	adk	-	2.7.4.3	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	M00049	R00127,R01547,R11319	RC00002	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ADK,ADK_lid
MMGS2_k127_1765444_2	234267.Acid_0571	9.367e-22	96.0	COG0346@1|root,COG0346@2|Bacteria,3Y85T@57723|Acidobacteria	57723|Acidobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
MMGS2_k127_1774584_0	1009370.ALO_16856	2.611e-117	391.0	COG0474@1|root,COG0474@2|Bacteria,1TPF5@1239|Firmicutes,4H1X5@909932|Negativicutes	909932|Negativicutes	P	ATPase, P-type (transporting), HAD superfamily, subfamily IC	-	-	-	-	-	-	-	-	-	-	-	-	Cation_ATPase,Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase,Hydrolase_3
MMGS2_k127_1793345_2	331113.SNE_A04940	9.941e-44	161.0	COG2001@1|root,COG2001@2|Bacteria	2|Bacteria	K	Belongs to the MraZ family	mraZ	GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141	-	ko:K03925	-	-	-	-	ko00000	-	-	-	MraZ
MMGS2_k127_1793345_1	331113.SNE_A04920	4.296e-44	163.0	COG0457@1|root,COG0457@2|Bacteria,2JG8H@204428|Chlamydiae	204428|Chlamydiae	S	Tetratricopeptide repeat	CP_0330	-	-	-	-	-	-	-	-	-	-	-	TPR_19
MMGS2_k127_1793345_0	1444712.BN1013_00773	1.397e-60	214.0	2DCT2@1|root,32U08@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	PRiA4_ORF3
MMGS2_k127_1793345_4	1444712.BN1013_00773	7.259e-20	89.0	2DCT2@1|root,32U08@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	PRiA4_ORF3
MMGS2_k127_1836663_2	1122211.JMLW01000007_gene85	0.0007843	43.0	COG2253@1|root,COG2253@2|Bacteria,1R3R3@1224|Proteobacteria,1S0PT@1236|Gammaproteobacteria,1XHH4@135619|Oceanospirillales	135619|Oceanospirillales	S	Nucleotidyl transferase AbiEii toxin, Type IV TA system	-	-	-	-	-	-	-	-	-	-	-	-	AbiEii
MMGS2_k127_1836663_1	331113.SNE_A16820	7.456e-106	362.0	COG0552@1|root,COG0552@2|Bacteria,2JFD8@204428|Chlamydiae	204428|Chlamydiae	D	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)	ftsY	-	-	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2,3.A.5.7	-	-	SRP54,SRP54_N
MMGS2_k127_1836663_0	331113.SNE_A16810	3.205e-136	439.0	COG0045@1|root,COG0045@2|Bacteria,2JFW1@204428|Chlamydiae	204428|Chlamydiae	F	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit	sucC	-	6.2.1.5	ko:K01903	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00173,M00374,M00620	R00405,R02404	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	-	ATP-grasp_2,Ligase_CoA
MMGS2_k127_1841426_2	944564.HMPREF9200_1462	4.199e-104	350.0	COG0436@1|root,COG0436@2|Bacteria,1TQD6@1239|Firmicutes,4H1Y0@909932|Negativicutes	909932|Negativicutes	E	Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate	dapL	-	2.6.1.83	ko:K10206	ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230	M00527	R07613	RC00006,RC01847	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
MMGS2_k127_1841426_4	264201.pc0274	1.318e-85	289.0	COG0571@1|root,COG0571@2|Bacteria,2JFR9@204428|Chlamydiae	204428|Chlamydiae	J	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism	rnc	-	3.1.26.3	ko:K03685	ko03008,ko05205,map03008,map05205	-	-	-	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	-	-	-	Ribonucleas_3_3,dsrm
MMGS2_k127_1841426_0	1444711.CCJF01000004_gene1891	2.975e-202	640.0	COG1066@1|root,COG1066@2|Bacteria,2JFUU@204428|Chlamydiae	204428|Chlamydiae	L	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function	radA	-	-	ko:K04485	-	-	-	-	ko00000,ko03400	-	-	-	AAA_25,ATPase,ChlI,Lon_C
MMGS2_k127_1841426_3	765952.PUV_04780	5.204e-92	306.0	COG0605@1|root,COG0605@2|Bacteria,2JFX8@204428|Chlamydiae	204428|Chlamydiae	C	radicals which are normally produced within the cells and which are toxic to biological systems	sodA	-	1.15.1.1	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	-	-	-	ko00000,ko00001,ko01000	-	-	-	Sod_Fe_C,Sod_Fe_N
MMGS2_k127_1841426_1	264201.pc0269	4.935e-124	404.0	COG0777@1|root,COG0777@2|Bacteria,2JFSB@204428|Chlamydiae	204428|Chlamydiae	I	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA	accD	-	2.1.3.15,6.4.1.2	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742,R04386	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	Carboxyl_trans
MMGS2_k127_1866616_0	1229831.M832_06920	3.561e-107	356.0	COG0240@1|root,COG0240@2|Bacteria,2JFRP@204428|Chlamydiae	204428|Chlamydiae	I	Glycerol-3-phosphate dehydrogenase	gpsA	-	1.1.1.94	ko:K00057	ko00564,ko01110,map00564,map01110	-	R00842,R00844	RC00029	ko00000,ko00001,ko01000	-	-	-	NAD_Gly3P_dh_C,NAD_Gly3P_dh_N
MMGS2_k127_1866616_1	331113.SNE_A02240	5.697e-46	172.0	COG0062@1|root,COG0063@1|root,COG0062@2|Bacteria,COG0063@2|Bacteria,2JFGW@204428|Chlamydiae	204428|Chlamydiae	H	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration	nnrD	-	4.2.1.136,5.1.99.6	ko:K17758,ko:K17759	-	-	-	-	ko00000,ko01000	-	-	-	Carb_kinase,YjeF_N
MMGS2_k127_1873811_5	477228.YO5_08258	2.475e-21	95.0	COG0491@1|root,COG2897@1|root,COG0491@2|Bacteria,COG2897@2|Bacteria,1MUDN@1224|Proteobacteria,1RMMG@1236|Gammaproteobacteria,1Z2E4@136846|Pseudomonas stutzeri group	1236|Gammaproteobacteria	P	COG0491 Zn-dependent hydrolases, including glyoxylases	-	-	3.1.2.6	ko:K01069	ko00620,map00620	-	R01736	RC00004,RC00137	ko00000,ko00001,ko01000	-	-	-	Lactamase_B,Rhodanese
MMGS2_k127_1873811_1	525897.Dbac_1168	2.961e-61	216.0	COG2391@1|root,COG2391@2|Bacteria,1PUHW@1224|Proteobacteria,42UPR@68525|delta/epsilon subdivisions,2WQ7G@28221|Deltaproteobacteria,2MCFU@213115|Desulfovibrionales	28221|Deltaproteobacteria	S	Sulphur transport	-	-	-	ko:K07112	-	-	-	-	ko00000	-	-	-	Sulf_transp
MMGS2_k127_1873811_2	525897.Dbac_1169	3.782e-60	214.0	COG2391@1|root,COG2391@2|Bacteria,1RIWE@1224|Proteobacteria,42QRV@68525|delta/epsilon subdivisions,2WMUE@28221|Deltaproteobacteria,2MBG8@213115|Desulfovibrionales	28221|Deltaproteobacteria	S	Sulphur transport	-	-	-	ko:K07112	-	-	-	-	ko00000	-	-	-	Sulf_transp
MMGS2_k127_1873811_3	1117943.SFHH103_03385	1.659e-45	169.0	COG3039@1|root,COG3039@2|Bacteria,1MVTU@1224|Proteobacteria,2TVIR@28211|Alphaproteobacteria,4BHAQ@82115|Rhizobiaceae	28211|Alphaproteobacteria	L	High confidence in function and specificity	-	-	-	ko:K07481	-	-	-	-	ko00000	-	-	-	DDE_Tnp_1,DDE_Tnp_1_6,DUF772
MMGS2_k127_1873811_4	1444711.CCJF01000001_gene113	8.238e-32	128.0	2DUU4@1|root,33S9M@2|Bacteria,2JGWG@204428|Chlamydiae	204428|Chlamydiae	S	Nucleotidyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	NTP_transf_8
MMGS2_k127_1873811_6	1437425.CSEC_0996	8.204e-09	57.0	COG5340@1|root,COG5340@2|Bacteria,2JGT1@204428|Chlamydiae	204428|Chlamydiae	K	Psort location Cytoplasmic, score	-	-	-	-	-	-	-	-	-	-	-	-	AbiEi_4
MMGS2_k127_1891767_1	331113.SNE_A12610	2.498e-105	350.0	COG0592@1|root,COG0592@2|Bacteria,2JFQ0@204428|Chlamydiae	204428|Chlamydiae	L	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria	dnaN	-	2.7.7.7	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_beta,DNA_pol3_beta_2,DNA_pol3_beta_3
MMGS2_k127_1891767_2	592015.HMPREF1705_01539	1.265e-66	230.0	COG0693@1|root,COG0693@2|Bacteria,3TB17@508458|Synergistetes	508458|Synergistetes	S	TIGRFAM intracellular protease, PfpI family	-	-	3.5.1.124	ko:K05520	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	DJ-1_PfpI
MMGS2_k127_1891767_0	331113.SNE_A10700	7.578e-158	515.0	COG4166@1|root,COG4166@2|Bacteria,2JFE2@204428|Chlamydiae	204428|Chlamydiae	E	peptide ABC transporter, periplasmic	oppA_2	-	-	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25	-	-	SBP_bac_5
MMGS2_k127_1891767_6	248742.XP_005647045.1	8.001e-06	58.0	KOG2381@1|root,KOG2381@2759|Eukaryota,37QG7@33090|Viridiplantae,34P48@3041|Chlorophyta	3041|Chlorophyta	T	Phosphatidylinositol 3- and 4-kinase	-	-	-	-	-	-	-	-	-	-	-	-	PI3_PI4_kinase
MMGS2_k127_1891767_3	1089553.Tph_c00630	4.622e-58	208.0	COG1926@1|root,COG1926@2|Bacteria,1V256@1239|Firmicutes,249BZ@186801|Clostridia,42GND@68295|Thermoanaerobacterales	186801|Clostridia	F	Phosphoribosyl transferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Pribosyltran
MMGS2_k127_1891767_4	331113.SNE_A01670	8.481e-58	212.0	29ZJT@1|root,30MK2@2|Bacteria,2JG2M@204428|Chlamydiae	204428|Chlamydiae	-	-	CP_0080	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_1896339_0	643867.Ftrac_0931	1.463e-186	593.0	COG0358@1|root,COG0358@2|Bacteria,4NENT@976|Bacteroidetes,47K9B@768503|Cytophagia	976|Bacteroidetes	L	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	dnaG	-	-	ko:K02316	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	DnaB_bind,Toprim_2,Toprim_4,Toprim_N,zf-CHC2
MMGS2_k127_1896339_1	153721.MYP_1857	2.401e-14	73.0	COG0493@1|root,COG0493@2|Bacteria,4NG9R@976|Bacteroidetes,47M2V@768503|Cytophagia	976|Bacteroidetes	E	TIGRFAM glutamate synthases, NADH NADPH, small subunit	gltD	-	1.4.1.13,1.4.1.14	ko:K00266	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	-	R00093,R00114,R00248	RC00006,RC00010,RC02799	ko00000,ko00001,ko01000	-	-	-	Fer4_20,Pyr_redox_2
MMGS2_k127_1900858_0	331113.SNE_A09660	2.064e-216	683.0	COG0205@1|root,COG0205@2|Bacteria,2JFH8@204428|Chlamydiae	204428|Chlamydiae	H	Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions	pfk	-	2.7.1.90	ko:K00895	ko00010,ko00030,ko00051,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map01100,map01110,map01120,map01130	-	R00764,R02073	RC00017	ko00000,ko00001,ko01000	-	-	-	PFK
MMGS2_k127_1900858_1	1117647.M5M_05420	5.209e-50	179.0	COG1760@1|root,COG1760@2|Bacteria,1MUZN@1224|Proteobacteria,1RMJZ@1236|Gammaproteobacteria,1J51J@118884|unclassified Gammaproteobacteria	1236|Gammaproteobacteria	E	COG1760 L-serine deaminase	-	-	4.3.1.17	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	-	R00220,R00590	RC00331,RC02600	ko00000,ko00001,ko01000	-	-	-	SDH_alpha,SDH_beta
MMGS2_k127_1939357_2	765952.PUV_06060	1.259e-42	160.0	COG1420@1|root,COG1420@2|Bacteria,2JFK0@204428|Chlamydiae	204428|Chlamydiae	K	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons	hrcA	-	-	ko:K03705	-	-	-	-	ko00000,ko03000	-	-	-	HrcA
MMGS2_k127_1939357_1	264201.pc0973	5.379e-83	280.0	COG0431@1|root,COG0431@2|Bacteria,2JG3R@204428|Chlamydiae	204428|Chlamydiae	S	NADPH-dependent FMN reductase	-	-	-	-	-	-	-	-	-	-	-	-	FMN_red
MMGS2_k127_1939357_0	765952.PUV_20330	3.487e-107	357.0	COG2265@1|root,COG2265@2|Bacteria,2JFGZ@204428|Chlamydiae	204428|Chlamydiae	J	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family	-	-	2.1.1.190	ko:K03215	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	TRAM,tRNA_U5-meth_tr
MMGS2_k127_1996783_1	331113.SNE_A11180	9.648e-42	157.0	COG0563@1|root,COG0563@2|Bacteria,2JH6Z@204428|Chlamydiae	204428|Chlamydiae	F	adenylate kinase	-	-	2.7.4.3	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	M00049	R00127,R01547,R11319	RC00002	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ADK
MMGS2_k127_1996783_0	331113.SNE_A11200	3.784e-99	331.0	COG4974@1|root,COG4974@2|Bacteria,2JFCQ@204428|Chlamydiae	204428|Chlamydiae	D	Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids	xerD	-	-	ko:K04763	-	-	-	-	ko00000,ko03036	-	-	-	Phage_int_SAM_1,Phage_integrase
MMGS2_k127_20063_2	331113.SNE_A18290	0.0006968	44.0	2EFK6@1|root,33J5C@2|Bacteria,2JGIT@204428|Chlamydiae	204428|Chlamydiae	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_20063_0	331113.SNE_A18300	2.459e-43	164.0	COG1302@1|root,COG1302@2|Bacteria,2JG88@204428|Chlamydiae	204428|Chlamydiae	S	Asp23 family, cell envelope-related function	-	-	-	-	-	-	-	-	-	-	-	-	Asp23
MMGS2_k127_20063_1	331113.SNE_A18330	6.465e-23	103.0	2EUQE@1|root,33N63@2|Bacteria,2JGGV@204428|Chlamydiae	204428|Chlamydiae	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4339
MMGS2_k127_2076679_3	765952.PUV_12590	6.868e-07	51.0	COG0291@1|root,COG0291@2|Bacteria,2JGJ0@204428|Chlamydiae	204428|Chlamydiae	J	Belongs to the bacterial ribosomal protein bL35 family	rpmI	-	-	ko:K02916	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L35p
MMGS2_k127_2076679_1	331113.SNE_A13900	4.251e-46	168.0	COG0292@1|root,COG0292@2|Bacteria,2JG6Y@204428|Chlamydiae	204428|Chlamydiae	J	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit	rplT	-	-	ko:K02887	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L20
MMGS2_k127_2076679_0	1444711.CCJF01000004_gene2467	1.599e-143	463.0	COG0016@1|root,COG0016@2|Bacteria,2JFFZ@204428|Chlamydiae	204428|Chlamydiae	J	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily	pheS	-	6.1.1.20	ko:K01889	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Phe_tRNA-synt_N,tRNA-synt_2d
MMGS2_k127_2076679_2	700598.Niako_0896	1.125e-11	66.0	COG0488@1|root,COG0488@2|Bacteria,4NEHU@976|Bacteroidetes,1IP6T@117747|Sphingobacteriia	976|Bacteroidetes	S	COGs COG0488 ATPase components of ABC transporter with duplicated ATPase domains	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran,ABC_tran_Xtn
MMGS2_k127_2080255_0	56107.Cylst_2352	1.086e-163	529.0	COG0665@1|root,COG0723@1|root,COG0665@2|Bacteria,COG0723@2|Bacteria,1G0WY@1117|Cyanobacteria,1HMIN@1161|Nostocales	1117|Cyanobacteria	CE	Glycine D-amino acid oxidase (deaminating)	-	-	-	-	-	-	-	-	-	-	-	-	DAO,Rieske
MMGS2_k127_2112448_3	1101195.Meth11DRAFT_2235	4.897e-40	154.0	COG0329@1|root,COG0329@2|Bacteria,1MUCM@1224|Proteobacteria,2VIQ4@28216|Betaproteobacteria,2KM15@206350|Nitrosomonadales	206350|Nitrosomonadales	E	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)	dapA	-	4.3.3.7	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R10147	RC03062,RC03063	ko00000,ko00001,ko00002,ko01000	-	-	-	DHDPS
MMGS2_k127_2112448_5	351160.RCIX2695	2.181e-14	77.0	arCOG11653@1|root,arCOG11653@2157|Archaea,2Y5YM@28890|Euryarchaeota	28890|Euryarchaeota	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_2112448_1	580327.Tthe_0829	3.154e-72	253.0	COG5459@1|root,COG5459@2|Bacteria,1V30U@1239|Firmicutes,24GFC@186801|Clostridia	186801|Clostridia	J	PFAM Ribosomal	-	-	-	-	-	-	-	-	-	-	-	-	Rsm22
MMGS2_k127_2112448_0	331113.SNE_A00620	5.483e-93	309.0	COG0692@1|root,COG0692@2|Bacteria,2JFZR@204428|Chlamydiae	204428|Chlamydiae	L	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine	ung	-	3.2.2.27	ko:K03648	ko03410,ko05340,map03410,map05340	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	UDG
MMGS2_k127_2112448_4	1444712.BN1013_00391	1.49e-30	123.0	2E89V@1|root,332NQ@2|Bacteria,2JGEW@204428|Chlamydiae	204428|Chlamydiae	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_2112448_2	765952.PUV_18420	1.496e-57	211.0	COG0596@1|root,COG0596@2|Bacteria	2|Bacteria	S	hydrolase activity, acting on ester bonds	-	-	3.4.11.5	ko:K01259	ko00330,map00330	-	R00135	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Abhydrolase_1
MMGS2_k127_2126008_2	1444711.CCJF01000005_gene158	7.141e-60	217.0	COG0803@1|root,COG0803@2|Bacteria,2JG45@204428|Chlamydiae	204428|Chlamydiae	P	Belongs to the bacterial solute-binding protein 9 family	CP_0211	-	-	ko:K09815	ko02010,map02010	M00242	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.15.3,3.A.1.15.5	-	-	ZnuA
MMGS2_k127_2126008_1	264201.pc1806	2.088e-74	257.0	COG1121@1|root,COG1121@2|Bacteria,2JFY8@204428|Chlamydiae	204428|Chlamydiae	P	metal transport system ATP-binding protein	CP_0210	-	-	ko:K09817	ko02010,map02010	M00242	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.15.3,3.A.1.15.5	-	-	ABC_tran
MMGS2_k127_2126008_0	331113.SNE_A03510	6.778e-93	312.0	COG1108@1|root,COG1108@2|Bacteria,2JFS1@204428|Chlamydiae	204428|Chlamydiae	P	metal transport system membrane protein	CP_0209	-	-	ko:K09816	ko02010,map02010	M00242	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.15.3,3.A.1.15.5	-	-	ABC-3
MMGS2_k127_2144757_0	1444711.CCJF01000004_gene1973	1.501e-131	424.0	COG0774@1|root,COG0774@2|Bacteria,2JFHE@204428|Chlamydiae	204428|Chlamydiae	F	Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis	lpxC	-	3.5.1.108	ko:K02535	ko00540,ko01100,map00540,map01100	M00060	R04587	RC00166,RC00300	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	LpxC
MMGS2_k127_2144757_1	264201.pc0400	3.637e-70	242.0	COG0815@1|root,COG0815@2|Bacteria,2JFX7@204428|Chlamydiae	204428|Chlamydiae	M	Transfers the fatty acyl group on membrane lipoproteins	lnt	-	-	ko:K03820	-	-	-	-	ko00000,ko01000	-	GT2	-	CN_hydrolase
MMGS2_k127_2158832_2	244582.JQAK01000002_gene464	3.683e-80	271.0	COG0454@1|root,COG2320@1|root,COG0456@2|Bacteria,COG2320@2|Bacteria,1RH46@1224|Proteobacteria,2U2UV@28211|Alphaproteobacteria,47GT1@766|Rickettsiales	766|Rickettsiales	K	GrpB protein	-	-	-	-	-	-	-	-	-	-	-	-	GrpB
MMGS2_k127_2158832_1	765952.PUV_27210	4.358e-86	289.0	COG2964@1|root,COG2964@2|Bacteria	2|Bacteria	S	HTH domain	dauR	-	-	ko:K21829	-	-	-	-	ko00000,ko03000	-	-	-	HTH_22,PAS_6
MMGS2_k127_2158832_0	384765.SIAM614_26116	1.723e-147	476.0	COG0436@1|root,COG0436@2|Bacteria,1R4E6@1224|Proteobacteria,2U35J@28211|Alphaproteobacteria	28211|Alphaproteobacteria	E	COG0436 Aspartate tyrosine aromatic aminotransferase	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_1_2
MMGS2_k127_2183917_2	765952.PUV_16360	9.77e-120	394.0	COG0635@1|root,COG0635@2|Bacteria,2JFTP@204428|Chlamydiae	204428|Chlamydiae	H	Involved in the biosynthesis of porphyrin-containing compound	hemN	-	-	-	-	-	-	-	-	-	-	-	HemN_C,Radical_SAM
MMGS2_k127_2183917_3	1444712.BN1013_02334	4.547e-39	151.0	2DMAA@1|root,32BTP@2|Bacteria,2JG6W@204428|Chlamydiae	204428|Chlamydiae	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_2183917_0	765952.PUV_12300	2.157e-302	952.0	COG0567@1|root,COG0567@2|Bacteria,2JFWQ@204428|Chlamydiae	204428|Chlamydiae	C	dehydrogenase e1 component	sucA	-	1.2.4.2	ko:K00164	ko00020,ko00310,ko00380,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map00380,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00032	R00621,R01933,R01940,R03316,R08549	RC00004,RC00027,RC00627,RC02743,RC02833,RC02883	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxogl_dehyd_N,E1_dh,OxoGdeHyase_C,Transket_pyr
MMGS2_k127_2183917_1	331113.SNE_A11090	7.648e-127	415.0	COG0508@1|root,COG0508@2|Bacteria,2JFPZ@204428|Chlamydiae	204428|Chlamydiae	C	2-oxoglutarate dehydrogenase	sucB	-	2.3.1.61	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00032	R02570,R02571,R08549	RC00004,RC02727,RC02833	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl
MMGS2_k127_220026_0	1444712.BN1013_01675	8.259e-128	426.0	COG2812@1|root,COG2812@2|Bacteria,2JFRF@204428|Chlamydiae	204428|Chlamydiae	H	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity	dnaX	-	2.7.7.7	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta2,DNA_pol3_gamma3
MMGS2_k127_220026_3	1444712.BN1013_01674	3.401e-27	113.0	COG0718@1|root,COG0718@2|Bacteria,2JGDH@204428|Chlamydiae	204428|Chlamydiae	S	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection	CP_0736	-	-	ko:K09747	-	-	-	-	ko00000	-	-	-	YbaB_DNA_bd
MMGS2_k127_220026_2	765952.PUV_17480	9e-51	184.0	COG3411@1|root,COG3411@2|Bacteria,2JH6P@204428|Chlamydiae	204428|Chlamydiae	C	Ferredoxin	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_220026_1	589865.DaAHT2_0380	6.643e-127	417.0	COG1373@1|root,COG1373@2|Bacteria,1R7UA@1224|Proteobacteria,42QMY@68525|delta/epsilon subdivisions,2WK60@28221|Deltaproteobacteria,2MQ2J@213118|Desulfobacterales	28221|Deltaproteobacteria	S	Domain of unknown function (DUF4143)	-	-	-	-	-	-	-	-	-	-	-	-	AAA_14,DUF4143
MMGS2_k127_2223260_1	997346.HMPREF9374_2835	9.599e-57	209.0	COG4403@1|root,COG4403@2|Bacteria,1V13V@1239|Firmicutes,4HFSX@91061|Bacilli	91061|Bacilli	V	Lanthionine synthetase C-like protein	spaC1	-	-	ko:K20484	ko02020,ko02024,map02020,map02024	-	-	-	ko00000,ko00001	-	-	-	LANC_like
MMGS2_k127_2223260_0	765952.PUV_03460	5.735e-255	817.0	2C4IS@1|root,2Z81U@2|Bacteria	2|Bacteria	S	Lantibiotic dehydratase, C terminus	spaB	-	-	ko:K20483	ko02020,ko02024,map02020,map02024	-	-	-	ko00000,ko00001	-	-	-	Lant_dehydr_C,Lant_dehydr_N
MMGS2_k127_2223260_2	765952.PUV_16380	4.65e-35	137.0	COG0313@1|root,COG0313@2|Bacteria,2JFZE@204428|Chlamydiae	204428|Chlamydiae	H	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA	-	-	2.1.1.198	ko:K07056	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	TP_methylase
MMGS2_k127_225433_1	331113.SNE_A05030	8.055e-181	571.0	COG0362@1|root,COG0362@2|Bacteria,2JFPS@204428|Chlamydiae	204428|Chlamydiae	G	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH	gnd	-	1.1.1.343,1.1.1.44	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	M00004,M00006	R01528,R10221	RC00001,RC00539	ko00000,ko00001,ko00002,ko01000	-	-	-	6PGD,NAD_binding_2
MMGS2_k127_225433_2	1408473.JHXO01000001_gene2106	2.32e-72	254.0	COG1741@1|root,COG1741@2|Bacteria,4NGJ5@976|Bacteroidetes,2FPC1@200643|Bacteroidia	976|Bacteroidetes	S	Belongs to the pirin family	yhhW	-	-	ko:K06911	-	-	-	-	ko00000	-	-	-	Pirin
MMGS2_k127_225433_3	1354314.CHV_e0031	1.56e-06	60.0	COG5533@1|root,COG5533@2|Bacteria,4P7NN@976|Bacteroidetes	976|Bacteroidetes	O	Ubiquitin carboxyl-terminal hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	UCH
MMGS2_k127_225433_0	1444711.CCJF01000005_gene887	2.69e-312	964.0	COG0481@1|root,COG0481@2|Bacteria,2JFFF@204428|Chlamydiae	204428|Chlamydiae	J	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner	lepA	-	-	ko:K03596	ko05134,map05134	-	-	-	ko00000,ko00001	-	-	-	EFG_C,GTP_EFTU,GTP_EFTU_D2,LepA_C
MMGS2_k127_2322370_1	331113.SNE_A08230	1.678e-77	264.0	COG0331@1|root,COG0331@2|Bacteria,2JFRU@204428|Chlamydiae	204428|Chlamydiae	I	malonyl CoA-acyl carrier protein transacylase	fabD	-	2.3.1.39	ko:K00645	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	M00082	R01626,R11671	RC00004,RC00039,RC02727	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyl_transf_1
MMGS2_k127_2322370_0	1229831.M832_02960	3.016e-116	383.0	COG0332@1|root,COG0332@2|Bacteria,2JFVI@204428|Chlamydiae	204428|Chlamydiae	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids	fabH	-	2.3.1.180	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00082,M00083	R10707	RC00004,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACP_syn_III,ACP_syn_III_C
MMGS2_k127_2322370_2	331113.SNE_A08180	4.375e-65	228.0	COG0353@1|root,COG0353@2|Bacteria,2JG40@204428|Chlamydiae	204428|Chlamydiae	L	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO	recR	-	-	ko:K06187	ko03440,map03440	-	-	-	ko00000,ko00001,ko03400	-	-	-	RecR,Toprim_4
MMGS2_k127_2322370_3	331113.SNE_A08170	4.276e-56	201.0	COG4775@1|root,COG4775@2|Bacteria,2JFDS@204428|Chlamydiae	204428|Chlamydiae	M	membrane	yaeT	-	-	ko:K07277	-	-	-	-	ko00000,ko02000,ko03029	1.B.33	-	-	Bac_surface_Ag,POTRA
MMGS2_k127_2366563_0	1444712.BN1013_02491	7.406e-162	522.0	COG3451@1|root,COG3451@2|Bacteria,2JFXM@204428|Chlamydiae	204428|Chlamydiae	U	AAA-like domain	traC	-	-	ko:K12063	-	-	-	-	ko00000,ko02044	3.A.7.11.1	-	-	AAA_10,TraC_F_IV
MMGS2_k127_2398493_0	331113.SNE_A00760	3.129e-112	380.0	COG1196@1|root,COG3209@1|root,COG1196@2|Bacteria,COG3209@2|Bacteria,2JFH5@204428|Chlamydiae	2|Bacteria	M	Rhs family	-	-	-	-	-	-	-	-	-	-	-	-	RHS_repeat
MMGS2_k127_2438052_5	331113.SNE_A10100	0.0001283	47.0	COG3083@1|root,COG3083@2|Bacteria	2|Bacteria	S	sulfuric ester hydrolase activity	yejM	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K07014	-	-	-	-	ko00000	-	-	-	DUF3413,Sulfatase
MMGS2_k127_2438052_0	264201.pc0143	8.553e-186	589.0	COG0148@1|root,COG0148@2|Bacteria,2JFH6@204428|Chlamydiae	204428|Chlamydiae	F	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis	eno	-	4.2.1.11	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	M00001,M00002,M00003,M00346,M00394	R00658	RC00349	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	-	-	-	Enolase_C,Enolase_N
MMGS2_k127_2438052_1	1444711.CCJF01000005_gene565	3.046e-112	372.0	COG1162@1|root,COG1162@2|Bacteria,2JFKQ@204428|Chlamydiae	204428|Chlamydiae	S	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit	rsgA	-	3.1.3.100	ko:K06949	ko00730,ko01100,map00730,map01100	-	R00615,R02135	RC00002,RC00017	ko00000,ko00001,ko01000,ko03009	-	-	-	RsgA_GTPase,RsgA_N
MMGS2_k127_2438052_3	331113.SNE_A22460	9.29e-62	222.0	COG0566@1|root,COG0566@2|Bacteria,2JG2I@204428|Chlamydiae	204428|Chlamydiae	J	SpoU rRNA Methylase family	ysgA	-	-	ko:K03437	-	-	-	-	ko00000,ko03016	-	-	-	SpoU_methylase
MMGS2_k127_2438052_2	331113.SNE_A22420	2.425e-78	284.0	COG2208@1|root,COG2208@2|Bacteria,2JGDN@204428|Chlamydiae	204428|Chlamydiae	KT	Stage II sporulation protein E (SpoIIE)	rbsU	-	3.1.3.3	ko:K07315	-	-	-	-	ko00000,ko01000,ko03021	-	-	-	Response_reg,SpoIIE
MMGS2_k127_2438720_0	331113.SNE_A18560	7.179e-237	762.0	COG1025@1|root,COG1025@2|Bacteria,2JFKH@204428|Chlamydiae	204428|Chlamydiae	O	insulinase family	ide	-	3.4.24.56	ko:K01408	ko05010,map05010	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_M16,Peptidase_M16_C,Peptidase_M16_M
MMGS2_k127_2438720_1	331113.SNE_A18550	6.151e-102	338.0	COG0204@1|root,COG0204@2|Bacteria,2JFD3@204428|Chlamydiae	204428|Chlamydiae	I	Acyltransferase	plsB	-	2.3.1.15	ko:K00630	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R00851,R09380	RC00004,RC00039,RC00041	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyltransferase
MMGS2_k127_2464283_1	765952.PUV_10250	6.364e-85	294.0	COG3239@1|root,COG3239@2|Bacteria,2JFM8@204428|Chlamydiae	204428|Chlamydiae	C	Fatty acid desaturase	-	-	1.14.19.3	ko:K00508	ko00591,ko01100,map00591,map01100	-	R07063	RC00917	ko00000,ko00001,ko01000,ko01004	-	-	-	FA_desaturase
MMGS2_k127_2464283_0	1444711.CCJF01000005_gene549	6.36e-88	298.0	COG0845@1|root,COG0845@2|Bacteria,2JFET@204428|Chlamydiae	204428|Chlamydiae	M	Biotin-lipoyl like	-	-	-	ko:K01993	-	-	-	-	ko00000	-	-	-	HlyD_D23
MMGS2_k127_2464283_2	765952.PUV_01640	7.161e-19	87.0	COG1131@1|root,COG1131@2|Bacteria,2JFJI@204428|Chlamydiae	204428|Chlamydiae	V	ABC transporter	ybhF	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
MMGS2_k127_2501478_0	1268635.Loa_00344	6.828e-26	125.0	COG2256@1|root,COG2256@2|Bacteria,1P522@1224|Proteobacteria,1SVJ6@1236|Gammaproteobacteria,1JC4I@118969|Legionellales	2|Bacteria	L	atpase related to the helicase subunit of the holliday junction resolvase	rarA	-	-	ko:K07452,ko:K07478	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	AAA,AAA_assoc_2,MgsA_C,RuvB_N
MMGS2_k127_2502008_0	331113.SNE_A20110	4.915e-252	826.0	COG1450@1|root,COG4796@1|root,COG1450@2|Bacteria,COG4796@2|Bacteria,2JFMB@204428|Chlamydiae	204428|Chlamydiae	NU	Bacterial type II and III secretion system protein	sctC	-	-	ko:K03219	ko03070,map03070	M00332,M00542	-	-	ko00000,ko00001,ko00002,ko02044	3.A.6.1,3.A.6.3	-	-	Secretin,Secretin_N
MMGS2_k127_2502008_1	331113.SNE_A20140	5.552e-93	316.0	COG1729@1|root,COG1729@2|Bacteria	2|Bacteria	S	protein trimerization	cpoB	-	3.5.1.28	ko:K01448	ko01503,map01503	M00727	R04112	RC00064,RC00141	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	-	-	-	TPR_16,TPR_6,TolA_bind_tri,YfiO
MMGS2_k127_2502008_2	331113.SNE_A20150	6.976e-36	139.0	COG0759@1|root,COG0759@2|Bacteria,2JGCE@204428|Chlamydiae	204428|Chlamydiae	S	Haemolytic	-	-	-	-	-	-	-	-	-	-	-	-	Haemolytic
MMGS2_k127_2519516_1	1173022.Cri9333_3469	5.553e-105	347.0	COG1506@1|root,COG1506@2|Bacteria,1G200@1117|Cyanobacteria,1H8T3@1150|Oscillatoriales	1117|Cyanobacteria	E	PFAM Prolyl oligopeptidase family	dap2	-	-	-	-	-	-	-	-	-	-	-	PD40,Peptidase_S9
MMGS2_k127_2519516_4	351160.RCIX1966	1.989e-78	271.0	COG1467@1|root,arCOG04110@2157|Archaea	2157|Archaea	F	Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair	-	-	6.5.1.1	ko:K01971	ko03450,map03450	-	R00381	RC00005	ko00000,ko00001,ko01000,ko03400	-	-	-	-
MMGS2_k127_2519516_2	1161401.ASJA01000013_gene692	1.857e-104	347.0	COG1793@1|root,COG1793@2|Bacteria,1NTIR@1224|Proteobacteria,2UPWW@28211|Alphaproteobacteria	28211|Alphaproteobacteria	L	DNA ligase	-	-	6.5.1.1	ko:K01971	ko03450,map03450	-	R00381	RC00005	ko00000,ko00001,ko01000,ko03400	-	-	-	DNA_ligase_A_C,DNA_ligase_A_M,LigD_N
MMGS2_k127_2519516_6	411476.BACOVA_04131	1.33e-46	172.0	COG1793@1|root,COG1793@2|Bacteria,4NESR@976|Bacteroidetes,2FTNM@200643|Bacteroidia,4AT8Y@815|Bacteroidaceae	976|Bacteroidetes	L	DNA polymerase Ligase (LigD)	ligD	-	6.5.1.1	ko:K01971	ko03450,map03450	-	R00381	RC00005	ko00000,ko00001,ko01000,ko03400	-	-	-	DNA_ligase_A_C,DNA_ligase_A_M,LigD_N
MMGS2_k127_2519516_5	716544.wcw_1355	1.011e-66	231.0	COG0727@1|root,COG0727@2|Bacteria,2JH33@204428|Chlamydiae	204428|Chlamydiae	S	PFAM Uncharacterised protein family (UPF0153)	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_2519516_0	247490.KSU1_C1036	0.0	1022.0	COG0574@1|root,COG1080@1|root,COG0574@2|Bacteria,COG1080@2|Bacteria,2IYJS@203682|Planctomycetes	203682|Planctomycetes	G	Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate	-	-	-	-	-	-	-	-	-	-	-	-	PEP-utilizers,PEP-utilizers_C,PPDK_N
MMGS2_k127_2519516_3	331113.SNE_A02540	2.168e-91	309.0	COG1672@1|root,COG1672@2|Bacteria,2JGKE@204428|Chlamydiae	2|Bacteria	S	ATPase domain predominantly from Archaea	-	-	-	ko:K06921	-	-	-	-	ko00000	-	-	-	ATPase_2,DUF234
MMGS2_k127_2529836_2	331113.SNE_A14940	1.547e-19	91.0	COG1390@1|root,COG1390@2|Bacteria,2JG7T@204428|Chlamydiae	204428|Chlamydiae	C	Produces ATP from ADP in the presence of a proton gradient across the membrane	atpE	-	-	ko:K02121	ko00190,ko01100,map00190,map01100	M00159	-	-	ko00000,ko00001,ko00002	3.A.2.2,3.A.2.3	-	-	HrpE
MMGS2_k127_2529836_1	331113.SNE_A14930	1.769e-51	191.0	28PGQ@1|root,2ZC7E@2|Bacteria,2JFYT@204428|Chlamydiae	204428|Chlamydiae	S	Protein of unknown function (DUF2764)	CP_0687	-	-	-	-	-	-	-	-	-	-	-	DUF2764
MMGS2_k127_2529836_0	331113.SNE_A14920	1.342e-288	895.0	COG1155@1|root,COG1155@2|Bacteria,2JFIJ@204428|Chlamydiae	204428|Chlamydiae	F	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit	atpA	-	3.6.3.14,3.6.3.15	ko:K02117	ko00190,ko01100,map00190,map01100	M00159	-	-	ko00000,ko00001,ko00002,ko01000	3.A.2.2,3.A.2.3	-	-	ATP-synt_ab,ATP-synt_ab_N,ATP-synt_ab_Xtn
MMGS2_k127_2533885_0	331113.SNE_A08410	3.89e-93	314.0	COG4956@1|root,COG4956@2|Bacteria,2JFPK@204428|Chlamydiae	204428|Chlamydiae	S	TRAM domain	-	-	-	-	-	-	-	-	-	-	-	-	TRAM
MMGS2_k127_2533885_1	1444711.CCJF01000005_gene1461	2.048e-14	87.0	2DD5G@1|root,2ZGM0@2|Bacteria,2JHEC@204428|Chlamydiae	204428|Chlamydiae	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_2535143_0	523845.AQXV01000040_gene1689	6.152e-114	376.0	arCOG12080@1|root,arCOG12080@2157|Archaea,2Y30S@28890|Euryarchaeota	28890|Euryarchaeota	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_2535143_1	452471.Aasi_1443	1.077e-53	210.0	COG0515@1|root,COG0666@1|root,COG5113@1|root,COG0515@2|Bacteria,COG0666@2|Bacteria,COG5113@2|Bacteria,4NIMA@976|Bacteroidetes,47MCM@768503|Cytophagia	976|Bacteroidetes	KLT	Protein tyrosine kinase	-	-	2.7.11.1	ko:K08838,ko:K12132	-	-	-	-	ko00000,ko01000,ko01001,ko04131	-	-	-	MORN,Pkinase
MMGS2_k127_2535143_3	1380391.JIAS01000020_gene1531	8.467e-11	65.0	2DRFV@1|root,33BJD@2|Bacteria,1NM2T@1224|Proteobacteria,2UX6G@28211|Alphaproteobacteria,2JYBR@204441|Rhodospirillales	204441|Rhodospirillales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_2535143_2	1437425.CSEC_2368	6.218e-16	78.0	COG4108@1|root,COG4108@2|Bacteria,2JFKT@204428|Chlamydiae	204428|Chlamydiae	J	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP	-	-	-	ko:K02837	-	-	-	-	ko00000,ko03012	-	-	-	GTP_EFTU,RF3_C
MMGS2_k127_253596_1	1444711.CCJF01000005_gene648	5.194e-44	166.0	COG4669@1|root,COG4669@2|Bacteria,2JFMR@204428|Chlamydiae	204428|Chlamydiae	U	Type III	sctJ	-	-	ko:K03222	ko03070,map03070	M00332,M00542,M00660	-	-	ko00000,ko00001,ko00002,ko02044	3.A.6.1,3.A.6.3	-	-	YscJ_FliF
MMGS2_k127_253596_0	331113.SNE_A02940	9.325e-87	297.0	COG1216@1|root,COG1216@2|Bacteria,2JFZ9@204428|Chlamydiae	204428|Chlamydiae	S	Glycosyltransferase like family 2	-	-	-	ko:K07011	-	-	-	-	ko00000	-	-	-	Glycos_transf_2
MMGS2_k127_253596_2	3880.AET02272	7.33e-35	140.0	COG0461@1|root,KOG1377@2759|Eukaryota,37INB@33090|Viridiplantae,3GBYY@35493|Streptophyta,4JNNC@91835|fabids	35493|Streptophyta	F	Uridine 5-monophosphate	-	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010035,GO:0010038,GO:0016036,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042221,GO:0042594,GO:0044424,GO:0044444,GO:0044464,GO:0046686,GO:0050896,GO:0051716,GO:0071496	2.4.2.10,4.1.1.23	ko:K13421	ko00240,ko00983,ko01100,map00240,map00983,map01100	M00051	R00965,R01870,R08231	RC00063,RC00409,RC00611	ko00000,ko00001,ko00002,ko01000	-	-	-	OMPdecase,Pribosyltran
MMGS2_k127_2568556_1	331113.SNE_A14210	2.912e-85	297.0	COG1165@1|root,COG1165@2|Bacteria,2JG2A@204428|Chlamydiae	204428|Chlamydiae	H	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)	menD	-	2.2.1.9	ko:K02551	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R08165	RC02186	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_N
MMGS2_k127_2568556_3	163908.KB235896_gene1583	8.523e-16	82.0	COG2267@1|root,COG2267@2|Bacteria,1G0AC@1117|Cyanobacteria,1HMVI@1161|Nostocales	1117|Cyanobacteria	I	Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC)	menH	-	4.2.99.20	ko:K08680	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R08166	RC02148,RC02475	ko00000,ko00001,ko00002,ko01000	-	-	-	Abhydrolase_1,Abhydrolase_6
MMGS2_k127_2568556_0	331113.SNE_A14250	8.777e-145	462.0	COG0447@1|root,COG0447@2|Bacteria,2JFGT@204428|Chlamydiae	204428|Chlamydiae	H	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)	menB	-	4.1.3.36	ko:K01661	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R07263	RC01923	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
MMGS2_k127_2568556_2	331113.SNE_A14260	1.201e-67	240.0	COG1575@1|root,COG1575@2|Bacteria,2JG47@204428|Chlamydiae	204428|Chlamydiae	H	Belongs to the MenA family. Type 1 subfamily	menA	-	2.5.1.74	ko:K02548	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R05617,R06858,R10757	RC02935,RC02936,RC03264	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	UbiA
MMGS2_k127_2568556_4	1437425.CSEC_2084	3.503e-10	66.0	COG1441@1|root,COG1441@2|Bacteria,2JG4Q@204428|Chlamydiae	204428|Chlamydiae	H	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain	menC	-	4.2.1.113	ko:K02549	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116	R04031	RC01053	ko00000,ko00001,ko00002,ko01000	-	-	-	MR_MLE_C
MMGS2_k127_2572509_3	331113.SNE_A05030	4.573e-53	189.0	COG0362@1|root,COG0362@2|Bacteria,2JFPS@204428|Chlamydiae	204428|Chlamydiae	G	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH	gnd	-	1.1.1.343,1.1.1.44	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	M00004,M00006	R01528,R10221	RC00001,RC00539	ko00000,ko00001,ko00002,ko01000	-	-	-	6PGD,NAD_binding_2
MMGS2_k127_2572509_4	331113.SNE_A05000	1.632e-52	192.0	COG0860@1|root,COG0860@2|Bacteria,2JG43@204428|Chlamydiae	204428|Chlamydiae	M	N-acetylmuramoyl-L-alanine amidase	amiA	-	3.5.1.28	ko:K01448	ko01503,map01503	M00727	R04112	RC00064,RC00141	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	-	-	-	Amidase_3
MMGS2_k127_2572509_1	1444711.CCJF01000005_gene877	4.927e-158	512.0	COG0769@1|root,COG0769@2|Bacteria,2JFTS@204428|Chlamydiae	204428|Chlamydiae	M	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan	murE	-	6.3.2.13	ko:K01928	ko00300,ko00550,map00300,map00550	-	R02788	RC00064,RC00090	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
MMGS2_k127_2572509_0	765952.PUV_19700	3.57e-242	766.0	COG0768@1|root,COG0768@2|Bacteria,2JFH0@204428|Chlamydiae	204428|Chlamydiae	M	penicillin-binding protein	pbp3	-	3.4.16.4	ko:K03587	ko00550,ko01501,map00550,map01501	-	-	-	ko00000,ko00001,ko01000,ko01011,ko03036	-	-	-	PBP_dimer,Transpeptidase
MMGS2_k127_2572509_5	1444711.CCJF01000005_gene875	2.11e-19	92.0	2DQ1W@1|root,334EN@2|Bacteria,2JGD5@204428|Chlamydiae	204428|Chlamydiae	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_2572509_2	331113.SNE_A04960	6.991e-54	195.0	COG0275@1|root,COG0275@2|Bacteria,2JFV8@204428|Chlamydiae	204428|Chlamydiae	J	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA	rsmH	-	2.1.1.199	ko:K03438	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltransf_5
MMGS2_k127_2580200_2	264201.pc0174	4.183e-66	228.0	COG0556@1|root,COG0556@2|Bacteria,2JFI1@204428|Chlamydiae	204428|Chlamydiae	L	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage	uvrB	-	-	ko:K03702	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	Helicase_C,ResIII,UVR,UvrB
MMGS2_k127_2580200_1	331113.SNE_A22980	2.627e-137	447.0	COG0814@1|root,COG0814@2|Bacteria,2JFFY@204428|Chlamydiae	204428|Chlamydiae	E	Tryptophan/tyrosine permease family	tyrP_1	-	-	ko:K03834	-	-	-	-	ko00000,ko02000	2.A.42.1.1	-	-	Trp_Tyr_perm
MMGS2_k127_2580200_0	331113.SNE_A22990	1.384e-255	797.0	COG1351@1|root,COG1351@2|Bacteria,2JFK7@204428|Chlamydiae	204428|Chlamydiae	F	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant	CP_1126	-	-	-	-	-	-	-	-	-	-	-	Thy1
MMGS2_k127_2628566_0	331113.SNE_A23170	2.166e-161	524.0	COG4166@1|root,COG4166@2|Bacteria,2JFE2@204428|Chlamydiae	204428|Chlamydiae	E	peptide ABC transporter, periplasmic	oppA_2	-	-	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25	-	-	SBP_bac_5
MMGS2_k127_2671098_1	331113.SNE_A14430	6.049e-62	219.0	COG0631@1|root,COG0631@2|Bacteria,2JG4D@204428|Chlamydiae	204428|Chlamydiae	T	Serine threonine protein phosphatase	prpC	-	3.1.3.16	ko:K01090,ko:K20074	-	-	-	-	ko00000,ko01000,ko01009	-	-	-	PP2C_2
MMGS2_k127_2671098_0	416591.Tlet_1830	1.193e-68	248.0	COG4826@1|root,COG4826@2|Bacteria,2GDUM@200918|Thermotogae	200918|Thermotogae	O	SERine  Proteinase INhibitors	-	-	-	ko:K13963	ko05146,map05146	-	-	-	ko00000,ko00001	-	-	-	Serpin
MMGS2_k127_2671098_2	716544.wcw_0946	1.082e-27	116.0	COG1266@1|root,COG1266@2|Bacteria,2JGC1@204428|Chlamydiae	204428|Chlamydiae	S	CAAX protease self-immunity	-	-	-	ko:K07052	-	-	-	-	ko00000	-	-	-	Abi
MMGS2_k127_2674566_2	1437425.CSEC_2043	2.752e-57	212.0	COG0454@1|root,COG0456@2|Bacteria	2|Bacteria	K	acetyltransferase	yhfO	-	-	ko:K03825	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_1
MMGS2_k127_2674566_3	1437425.CSEC_1409	1.44e-47	183.0	COG0454@1|root,COG0456@2|Bacteria,2JH30@204428|Chlamydiae	204428|Chlamydiae	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
MMGS2_k127_2674566_0	1408445.JHXP01000013_gene2567	1.956e-80	273.0	COG0693@1|root,COG0693@2|Bacteria,1N8N6@1224|Proteobacteria,1S32P@1236|Gammaproteobacteria,1JGQ9@118969|Legionellales	118969|Legionellales	S	DJ-1/PfpI family	thiJ	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI
MMGS2_k127_2674566_1	1444711.CCJF01000005_gene369	6.15e-70	243.0	COG1357@1|root,COG1357@2|Bacteria,2JGAU@204428|Chlamydiae	204428|Chlamydiae	S	Pentapeptide repeats (9 copies)	-	-	-	-	-	-	-	-	-	-	-	-	Pentapeptide
MMGS2_k127_2674566_4	244581.IM40_02920	0.000171	44.0	COG3202@1|root,COG3202@2|Bacteria,1MVP5@1224|Proteobacteria,2U1N0@28211|Alphaproteobacteria	28211|Alphaproteobacteria	C	ATP ADP translocase	-	-	-	ko:K03301	-	-	-	-	ko00000	2.A.12	-	-	MFS_1,TLC
MMGS2_k127_27382_3	1444711.CCJF01000004_gene1955	0.0001643	45.0	COG0124@1|root,COG0124@2|Bacteria,2JFJ0@204428|Chlamydiae	204428|Chlamydiae	J	histidyl-tRNA synthetase	hisS	-	6.1.1.21	ko:K01892	ko00970,map00970	M00359,M00360	R03655	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,tRNA-synt_His
MMGS2_k127_27382_0	331113.SNE_A21670	1.382e-67	238.0	COG0545@1|root,COG0545@2|Bacteria,2JFN0@204428|Chlamydiae	204428|Chlamydiae	M	Peptidyl-prolyl cis-trans	mip	-	5.2.1.8	ko:K01802	-	-	-	-	ko00000,ko01000	-	-	-	FKBP_C,FKBP_N
MMGS2_k127_27382_1	1444711.CCJF01000004_gene1952	6.562e-62	216.0	COG0219@1|root,COG0219@2|Bacteria,2JG5G@204428|Chlamydiae	204428|Chlamydiae	J	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily	cspR	-	2.1.1.207	ko:K03216	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	SpoU_methylase
MMGS2_k127_27382_2	1122164.JHWF01000007_gene1135	2.742e-33	137.0	COG0834@1|root,COG1301@1|root,COG0834@2|Bacteria,COG1301@2|Bacteria,1P22C@1224|Proteobacteria,1RSGY@1236|Gammaproteobacteria	1236|Gammaproteobacteria	P	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family	-	-	-	ko:K02030	-	M00236	-	-	ko00000,ko00002,ko02000	3.A.1.3	-	-	SBP_bac_3,SDF
MMGS2_k127_2750527_0	331113.SNE_A14700	2.119e-84	293.0	COG0457@1|root,COG0515@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,2JFQ8@204428|Chlamydiae	204428|Chlamydiae	F	Together with the serine threonine kinase Pkn1, may play a role in the specific interactions with host proteins during intracellular growth	pknD	-	2.7.11.1	ko:K08884,ko:K12132	-	-	-	-	ko00000,ko01000,ko01001	-	-	-	Pkinase
MMGS2_k127_2750527_1	946362.XP_004990804.1	5.532e-09	68.0	COG0515@1|root,KOG4308@1|root,KOG0192@2759|Eukaryota,KOG4308@2759|Eukaryota	2759|Eukaryota	S	interleukin-8 biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	LRR_6,Pkinase,Pkinase_Tyr
MMGS2_k127_2750527_2	9940.ENSOARP00000012292	0.0001809	53.0	COG0790@1|root,KOG1550@2759|Eukaryota,38DKP@33154|Opisthokonta,3BJD0@33208|Metazoa,3CZ42@33213|Bilateria,48QEU@7711|Chordata,49M0W@7742|Vertebrata,3JDTQ@40674|Mammalia,4J02S@91561|Cetartiodactyla	33208|Metazoa	MOT	Sel-1 suppressor of lin-12-like 2 (C. elegans)	SEL1L2	GO:0000151,GO:0000153,GO:0000835,GO:0000836,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008593,GO:0009056,GO:0009057,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0010646,GO:0010648,GO:0012505,GO:0016020,GO:0019538,GO:0019941,GO:0023051,GO:0023057,GO:0030163,GO:0030433,GO:0031410,GO:0031982,GO:0031984,GO:0032991,GO:0033554,GO:0034976,GO:0036503,GO:0042175,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045746,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051603,GO:0051716,GO:0065007,GO:0071704,GO:0097708,GO:0098796,GO:0098827,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1902494,GO:1990234	-	ko:K14026	ko04141,map04141	M00403	-	-	ko00000,ko00001,ko00002	-	-	-	Sel1
MMGS2_k127_2755093_0	331113.SNE_A11100	4.764e-193	612.0	COG1249@1|root,COG1249@2|Bacteria,2JFG6@204428|Chlamydiae	204428|Chlamydiae	C	Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes	dld1	-	1.8.1.4	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00036,M00307,M00532	R00209,R01221,R01698,R03815,R07618,R08549	RC00004,RC00022,RC00583,RC02742,RC02833,RC02834	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pyr_redox_2,Pyr_redox_dim
MMGS2_k127_2755093_1	331113.SNE_A11160	1.128e-78	266.0	COG0316@1|root,COG0316@2|Bacteria,2JFY5@204428|Chlamydiae	204428|Chlamydiae	S	Domain of unknown function (DUF1858)	iscA	-	-	-	-	-	-	-	-	-	-	-	DUF1858,Fe-S_biosyn
MMGS2_k127_2755093_2	1229831.M832_02340	6.838e-37	140.0	COG0633@1|root,COG0633@2|Bacteria,2JGF0@204428|Chlamydiae	204428|Chlamydiae	C	2Fe-2S iron-sulfur cluster binding domain	fdxC	-	-	-	-	-	-	-	-	-	-	-	Fer2
MMGS2_k127_275753_0	765952.PUV_18630	5.342e-300	932.0	COG0073@1|root,COG0143@1|root,COG0073@2|Bacteria,COG0143@2|Bacteria,2JFFM@204428|Chlamydiae	204428|Chlamydiae	J	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation	metG	-	6.1.1.10	ko:K01874	ko00450,ko00970,map00450,map00970	M00359,M00360	R03659,R04773	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,tRNA-synt_1g,tRNA_bind
MMGS2_k127_275753_1	1444712.BN1013_01195	3.063e-60	215.0	COG0194@1|root,COG0194@2|Bacteria,2JG3V@204428|Chlamydiae	204428|Chlamydiae	F	Essential for recycling GMP and indirectly, cGMP	gmk	-	2.7.4.8	ko:K00942	ko00230,ko01100,map00230,map01100	M00050	R00332,R02090	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_kin
MMGS2_k127_275753_2	264201.pc0660	1.209e-54	202.0	COG1561@1|root,COG1561@2|Bacteria,2JG0Y@204428|Chlamydiae	204428|Chlamydiae	S	Domain of unknown function (DUF1732)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1732,YicC_N
MMGS2_k127_2771081_0	331113.SNE_A11530	9.195e-149	484.0	COG0515@1|root,COG1262@1|root,COG0515@2|Bacteria,COG1262@2|Bacteria,2JFPX@204428|Chlamydiae	204428|Chlamydiae	KLT	Together with the serine threonine kinase PknD, may play a role in the specific interactions with host proteins during intracellular growth	pkn1	-	-	-	-	-	-	-	-	-	-	-	FGE-sulfatase,Pkinase
MMGS2_k127_2771515_0	331113.SNE_A07850	2.04e-266	828.0	COG0459@1|root,COG0459@2|Bacteria,2JFDX@204428|Chlamydiae	204428|Chlamydiae	O	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions	groL	GO:0005575,GO:0005576,GO:0005623,GO:0008150,GO:0009966,GO:0009967,GO:0009986,GO:0010646,GO:0010647,GO:0018995,GO:0020003,GO:0023051,GO:0023056,GO:0030430,GO:0033643,GO:0033646,GO:0033655,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0043900,GO:0043903,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0044464,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0065007,GO:0065010,GO:1901222,GO:1901224,GO:1902531,GO:1902533,GO:2000535	-	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	-	-	-	Cpn60_TCP1
MMGS2_k127_2771515_2	331113.SNE_A07860	7.613e-32	128.0	COG0234@1|root,COG0234@2|Bacteria,2JG6X@204428|Chlamydiae	204428|Chlamydiae	O	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter	groS	-	-	ko:K04078	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	Cpn10
MMGS2_k127_2771515_1	1444711.CCJF01000005_gene1113	1.048e-220	699.0	COG1164@1|root,COG1164@2|Bacteria,2JFQ1@204428|Chlamydiae	204428|Chlamydiae	E	oligoendopeptidase F	pepF	-	-	ko:K08602	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M3,Peptidase_M3_N
MMGS2_k127_2771515_3	765952.PUV_13120	2.313e-12	67.0	COG1925@1|root,COG1925@2|Bacteria,2JGE8@204428|Chlamydiae	204428|Chlamydiae	G	PTS HPr component phosphorylation site	-	-	-	ko:K11189	-	-	-	-	ko00000,ko02000	4.A.2.1	-	-	PTS-HPr
MMGS2_k127_2774077_3	1437425.CSEC_0394	2.122e-28	116.0	COG2827@1|root,COG2827@2|Bacteria,2JH7H@204428|Chlamydiae	204428|Chlamydiae	L	GIY-YIG catalytic domain	-	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
MMGS2_k127_2774077_1	765952.PUV_03410	9.529e-90	298.0	COG2818@1|root,COG2818@2|Bacteria,2JG0U@204428|Chlamydiae	204428|Chlamydiae	L	Methyladenine glycosylase	tag	-	3.2.2.20	ko:K01246	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Adenine_glyco
MMGS2_k127_2774077_0	1437425.CSEC_0398	6.64e-147	473.0	COG0042@1|root,COG0042@2|Bacteria,2JFKN@204428|Chlamydiae	204428|Chlamydiae	J	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines	-	-	-	ko:K05541	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Dus
MMGS2_k127_2774077_2	1444711.CCJF01000005_gene945	4.951e-61	216.0	COG0431@1|root,COG0431@2|Bacteria,2JG59@204428|Chlamydiae	204428|Chlamydiae	S	NADPH-dependent FMN reductase	-	-	-	-	-	-	-	-	-	-	-	-	FMN_red
MMGS2_k127_280839_1	1444711.CCJF01000005_gene1491	2.289e-69	238.0	COG0225@1|root,COG0229@1|root,COG0225@2|Bacteria,COG0229@2|Bacteria,2JFUA@204428|Chlamydiae	204428|Chlamydiae	C	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine	msrA	-	1.8.4.11,1.8.4.12	ko:K07304,ko:K12267	-	-	-	-	ko00000,ko01000	-	-	-	PMSR,SelR
MMGS2_k127_280839_2	1042163.BRLA_c042610	1.072e-22	102.0	COG1495@1|root,COG1495@2|Bacteria,1V79S@1239|Firmicutes,4HIKP@91061|Bacilli,26X65@186822|Paenibacillaceae	91061|Bacilli	O	Belongs to the DsbB family	bdbC	-	-	ko:K03611	-	-	-	-	ko00000,ko03110	5.A.2.1	-	-	DsbB
MMGS2_k127_280839_0	331113.SNE_A17760	5.777e-153	489.0	COG0542@1|root,COG0542@2|Bacteria,2JFW9@204428|Chlamydiae	204428|Chlamydiae	O	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity	clpB	-	-	ko:K03695	ko04213,map04213	-	-	-	ko00000,ko00001,ko03110	-	-	-	AAA,AAA_2,ClpB_D2-small,Clp_N
MMGS2_k127_2846660_2	331113.SNE_A05370	3.802e-25	106.0	COG2902@1|root,COG2902@2|Bacteria,2JFGR@204428|Chlamydiae	204428|Chlamydiae	C	Bacterial NAD-glutamate dehydrogenase	gdhB	-	1.4.1.2	ko:K15371	ko00220,ko00250,ko00430,ko00910,ko01100,map00220,map00250,map00430,map00910,map01100	-	R00243	RC00006,RC02799	ko00000,ko00001,ko01000	-	-	-	Bac_GDH,ELFV_dehydrog
MMGS2_k127_2846660_0	331113.SNE_A05350	1.433e-118	392.0	COG1420@1|root,COG1420@2|Bacteria,2JFK0@204428|Chlamydiae	204428|Chlamydiae	K	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons	hrcA	-	-	ko:K03705	-	-	-	-	ko00000,ko03000	-	-	-	HrcA
MMGS2_k127_2846660_1	331113.SNE_A05340	2.737e-51	186.0	COG0576@1|root,COG0576@2|Bacteria,2JG6C@204428|Chlamydiae	204428|Chlamydiae	O	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ	grpE	-	-	ko:K03687	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	GrpE
MMGS2_k127_2849345_2	1444711.CCJF01000005_gene1632	6.457e-08	62.0	COG2982@1|root,COG2982@2|Bacteria,2JFZM@204428|Chlamydiae	204428|Chlamydiae	M	Protein involved in outer membrane biogenesis	CP_0578	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_2849345_1	865937.Gilli_0474	4.95e-36	142.0	COG3059@1|root,COG3059@2|Bacteria,4NNX8@976|Bacteroidetes,1I2AZ@117743|Flavobacteriia	976|Bacteroidetes	S	membrane	-	-	-	-	-	-	-	-	-	-	-	-	DUF417,DoxX
MMGS2_k127_2849345_0	523845.AQXV01000019_gene364	1.438e-247	783.0	COG0474@1|root,arCOG01578@2157|Archaea,2XT4B@28890|Euryarchaeota,23QDK@183939|Methanococci	183939|Methanococci	P	TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC	-	-	3.6.3.8	ko:K01537	-	-	-	-	ko00000,ko01000	3.A.3.2	-	-	Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase,Hydrolase_3
MMGS2_k127_2859476_1	1437425.CSEC_0591	0.0001844	51.0	2BWXA@1|root,33I5P@2|Bacteria,2JGHE@204428|Chlamydiae	204428|Chlamydiae	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_2859476_0	331113.SNE_A16860	1.598e-114	380.0	COG1198@1|root,COG1198@2|Bacteria,2JFSI@204428|Chlamydiae	204428|Chlamydiae	L	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA	priA	-	-	ko:K04066	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Helicase_C,ResIII
MMGS2_k127_2875013_2	1444712.BN1013_00465	2.202e-61	220.0	COG2009@1|root,COG2009@2|Bacteria,2JFCP@204428|Chlamydiae	204428|Chlamydiae	C	succinate dehydrogenase	sdhC	-	-	ko:K00241	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002	-	-	-	-
MMGS2_k127_2875013_0	765952.PUV_00540	0.0	1012.0	COG1053@1|root,COG1053@2|Bacteria,2JFSU@204428|Chlamydiae	204428|Chlamydiae	C	succinate dehydrogenase	sdhA	-	1.3.5.1,1.3.5.4	ko:K00239	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_2,Succ_DH_flav_C
MMGS2_k127_2875013_1	716544.wcw_1782	2.79e-88	294.0	COG0479@1|root,COG0479@2|Bacteria,2JFQ7@204428|Chlamydiae	204428|Chlamydiae	C	succinate dehydrogenase	sdhB	-	1.3.5.1,1.3.5.4	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2_3,Fer4_10,Fer4_17,Fer4_8
MMGS2_k127_2875912_0	716544.wcw_0842	5.907e-76	258.0	COG2096@1|root,COG2096@2|Bacteria,2JFYG@204428|Chlamydiae	204428|Chlamydiae	S	Cobalamin adenosyltransferase	-	-	2.5.1.17	ko:K00798	ko00860,ko01100,map00860,map01100	M00122	R01492,R05220,R07268	RC00533	ko00000,ko00001,ko00002,ko01000	-	-	-	Cob_adeno_trans
MMGS2_k127_2875912_1	716544.wcw_0840	2.5e-46	171.0	COG0542@1|root,COG0542@2|Bacteria,2JFW9@204428|Chlamydiae	204428|Chlamydiae	O	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity	clpB	-	-	ko:K03695	ko04213,map04213	-	-	-	ko00000,ko00001,ko03110	-	-	-	AAA,AAA_2,ClpB_D2-small,Clp_N
MMGS2_k127_2878549_2	765952.PUV_08850	4.508e-81	281.0	COG0771@1|root,COG0771@2|Bacteria,2JFMY@204428|Chlamydiae	204428|Chlamydiae	M	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)	murD	-	6.3.2.9	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	-	R02783	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase_C,Mur_ligase_M
MMGS2_k127_2878549_4	331113.SNE_A17270	1.825e-41	161.0	COG1388@1|root,COG1388@2|Bacteria,2JG8Q@204428|Chlamydiae	204428|Chlamydiae	M	Lysin motif	nlpD	-	-	-	-	-	-	-	-	-	-	-	LysM
MMGS2_k127_2878549_0	331113.SNE_A17260	1.16e-120	399.0	COG0772@1|root,COG0772@2|Bacteria,2JFCC@204428|Chlamydiae	204428|Chlamydiae	D	Belongs to the SEDS family	ftsW	-	-	ko:K03588	ko04112,map04112	-	-	-	ko00000,ko00001,ko02000,ko03036	2.A.103.1	-	-	FTSW_RODA_SPOVE
MMGS2_k127_2878549_1	331113.SNE_A17250	3.984e-81	284.0	COG0707@1|root,COG0707@2|Bacteria,2JFEE@204428|Chlamydiae	204428|Chlamydiae	M	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)	murG	-	2.4.1.227	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	-	R05032,R05662	RC00005,RC00049	ko00000,ko00001,ko01000,ko01011	-	GT28	-	Glyco_tran_28_C,Glyco_transf_28
MMGS2_k127_2878549_3	765952.PUV_13350	8.428e-48	176.0	COG0773@1|root,COG1181@1|root,COG0773@2|Bacteria,COG1181@2|Bacteria,2JFRT@204428|Chlamydiae	204428|Chlamydiae	M	belongs to the MurCDEF family	murC	-	6.3.2.4,6.3.2.8	ko:K01921,ko:K01924	ko00471,ko00473,ko00550,ko01100,ko01502,map00471,map00473,map00550,map01100,map01502	-	R01150,R03193	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Dala_Dala_lig_C,Dala_Dala_lig_N,Mur_ligase,Mur_ligase_C,Mur_ligase_M
MMGS2_k127_292532_2	925409.KI911562_gene1375	7.611e-06	51.0	COG3219@1|root,COG3219@2|Bacteria,4NTD2@976|Bacteroidetes	976|Bacteroidetes	S	Putative DNA-binding domain	-	-	-	ko:K09929	-	-	-	-	ko00000	-	-	-	DUF2063
MMGS2_k127_292532_0	880073.Calab_0380	1.018e-111	366.0	COG3220@1|root,COG3220@2|Bacteria	2|Bacteria	C	belongs to the UPF0276 family	-	-	-	ko:K09930	-	-	-	-	ko00000	-	-	-	DUF692
MMGS2_k127_292532_1	1444711.CCJF01000005_gene1539	2.196e-105	352.0	COG2898@1|root,COG2898@2|Bacteria,2JGQP@204428|Chlamydiae	204428|Chlamydiae	S	Uncharacterised conserved protein (DUF2156)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2156
MMGS2_k127_2933222_2	690850.Desaf_0357	1.808e-15	78.0	COG2155@1|root,COG2155@2|Bacteria,1N77I@1224|Proteobacteria	1224|Proteobacteria	S	Domain of unknown function (DUF378)	-	-	-	ko:K09779	-	-	-	-	ko00000	-	-	-	DUF378
MMGS2_k127_2933222_1	357244.OTBS_0662	4.752e-49	192.0	COG3104@1|root,COG3104@2|Bacteria,1MW6W@1224|Proteobacteria,2U15C@28211|Alphaproteobacteria,47FJX@766|Rickettsiales	766|Rickettsiales	E	POT family	-	-	-	ko:K03305	-	-	-	-	ko00000	2.A.17	-	-	PTR2
MMGS2_k127_2933222_0	331113.SNE_A20590	2.693e-52	195.0	COG2267@1|root,COG2267@2|Bacteria,2JH8H@204428|Chlamydiae	204428|Chlamydiae	I	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
MMGS2_k127_2937629_1	331113.SNE_A22570	4.369e-81	275.0	COG0491@1|root,COG0491@2|Bacteria,2JG0X@204428|Chlamydiae	204428|Chlamydiae	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
MMGS2_k127_2937629_2	1444711.CCJF01000005_gene317	2.135e-42	162.0	COG2264@1|root,COG2264@2|Bacteria,2JGAK@204428|Chlamydiae	204428|Chlamydiae	J	Ribosomal protein L11 methyltransferase (PrmA)	prmA	-	-	ko:K02687	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PrmA
MMGS2_k127_2937629_0	1122169.AREN01000003_gene1145	5.445e-95	322.0	COG2271@1|root,COG2271@2|Bacteria,1PND6@1224|Proteobacteria,1S0Z6@1236|Gammaproteobacteria,1JCZ0@118969|Legionellales	118969|Legionellales	G	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
MMGS2_k127_2948591_6	765869.BDW_10315	4.807e-10	61.0	COG2217@1|root,COG2217@2|Bacteria,1MU08@1224|Proteobacteria,42M2R@68525|delta/epsilon subdivisions,2MSSV@213481|Bdellovibrionales,2WJ4J@28221|Deltaproteobacteria	213481|Bdellovibrionales	P	ATPase, P-type (transporting), HAD superfamily, subfamily IC	copF	-	3.6.3.54	ko:K17686	ko01524,ko04016,map01524,map04016	-	R00086	RC00002	ko00000,ko00001,ko01000	3.A.3.5	-	-	E1-E2_ATPase,HMA,Hydrolase,YHS
MMGS2_k127_2948591_1	247490.KSU1_C0527	7.151e-151	486.0	COG2132@1|root,COG2132@2|Bacteria,2IX3N@203682|Planctomycetes	203682|Planctomycetes	Q	Multicopper oxidase	-	-	1.16.3.3	ko:K22348	-	-	-	-	ko00000,ko01000	-	-	-	Cu-oxidase_2,Cu-oxidase_3
MMGS2_k127_2948591_2	765952.PUV_15550	2.694e-103	351.0	COG1538@1|root,COG1538@2|Bacteria,2JGB1@204428|Chlamydiae	204428|Chlamydiae	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
MMGS2_k127_2948591_5	331113.SNE_A03260	3.684e-50	180.0	COG0051@1|root,COG0051@2|Bacteria,2JG78@204428|Chlamydiae	204428|Chlamydiae	J	Involved in the binding of tRNA to the ribosomes	rpsJ	-	-	ko:K02946	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S10
MMGS2_k127_2948591_0	331113.SNE_A03270	0.0	1108.0	COG0480@1|root,COG0480@2|Bacteria,2JFJN@204428|Chlamydiae	204428|Chlamydiae	J	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome	fusA	-	-	ko:K02355	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2
MMGS2_k127_2948591_3	1437425.CSEC_2003	1.613e-72	247.0	COG0049@1|root,COG0049@2|Bacteria,2JFZ4@204428|Chlamydiae	204428|Chlamydiae	J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA	rpsG	-	-	ko:K02992	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S7
MMGS2_k127_2948591_4	264201.pc0209	7.607e-68	231.0	COG0048@1|root,COG0048@2|Bacteria,2JG35@204428|Chlamydiae	204428|Chlamydiae	J	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit	rpsL	-	-	ko:K02950	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosom_S12_S23
MMGS2_k127_2949258_3	331113.SNE_A21060	2.35e-53	191.0	COG0203@1|root,COG0203@2|Bacteria,2JG4B@204428|Chlamydiae	204428|Chlamydiae	J	Ribosomal protein L17	rplQ	-	-	ko:K02879	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L17
MMGS2_k127_2949258_0	331113.SNE_A21070	1.08e-158	507.0	COG0202@1|root,COG0202@2|Bacteria,2JFH2@204428|Chlamydiae	204428|Chlamydiae	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	rpoA	-	2.7.7.6	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	RNA_pol_A_CTD,RNA_pol_A_bac,RNA_pol_L
MMGS2_k127_2949258_2	1444711.CCJF01000004_gene2004	5.804e-56	198.0	COG0100@1|root,COG0100@2|Bacteria,2JG17@204428|Chlamydiae	204428|Chlamydiae	J	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome	rpsK	-	-	ko:K02948	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S11
MMGS2_k127_2949258_4	716544.wcw_1483	1.117e-51	185.0	COG0099@1|root,COG0099@2|Bacteria,2JG65@204428|Chlamydiae	204428|Chlamydiae	J	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits	rpsM	-	-	ko:K02952	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S13
MMGS2_k127_2949258_1	331113.SNE_A21100	5.727e-124	401.0	COG0201@1|root,COG0201@2|Bacteria,2JFDR@204428|Chlamydiae	204428|Chlamydiae	U	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently	secY	-	-	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5	-	-	SecY
MMGS2_k127_2980990_3	765952.PUV_12630	3.341e-08	56.0	COG0859@1|root,COG0859@2|Bacteria,2JFJF@204428|Chlamydiae	204428|Chlamydiae	M	Glycosyltransferase family 9 (heptosyltransferase)	waaC	-	-	ko:K02841	ko00540,ko01100,map00540,map01100	M00080	-	-	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT9	-	Glyco_transf_9
MMGS2_k127_2980990_1	1444711.CCJF01000004_gene2468	3.383e-54	200.0	COG0564@1|root,COG0564@2|Bacteria,2JG7S@204428|Chlamydiae	204428|Chlamydiae	J	Pseudouridine synthase	rluC	-	5.4.99.24	ko:K06179	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2
MMGS2_k127_2980990_0	1444711.CCJF01000005_gene1204	4.024e-139	457.0	COG0260@1|root,COG0260@2|Bacteria,2JFEQ@204428|Chlamydiae	204428|Chlamydiae	E	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides	pepA	-	3.4.11.1	ko:K01255	ko00480,ko01100,map00480,map01100	-	R00899,R04951	RC00096,RC00141	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_M17,Peptidase_M17_N
MMGS2_k127_2980990_2	331113.SNE_A08520	2.074e-46	173.0	COG0629@1|root,COG0629@2|Bacteria,2JG9D@204428|Chlamydiae	204428|Chlamydiae	L	Single-stranded DNA-binding protein	ssb	-	-	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	-	-	-	ko00000,ko00001,ko03029,ko03032,ko03400	-	-	-	SSB
MMGS2_k127_3019991_2	589865.DaAHT2_2101	3.284e-23	101.0	COG0640@1|root,COG0640@2|Bacteria	2|Bacteria	K	DNA-binding transcription factor activity	ybzH	-	-	-	-	-	-	-	-	-	-	-	DUF43,HTH_20,HTH_5
MMGS2_k127_3019991_3	690850.Desaf_2484	1.183e-15	81.0	COG2391@1|root,COG2391@2|Bacteria,1RDQK@1224|Proteobacteria,42RU6@68525|delta/epsilon subdivisions,2WNJT@28221|Deltaproteobacteria,2MBSU@213115|Desulfovibrionales	28221|Deltaproteobacteria	S	Sulphur transport	-	-	-	ko:K07112	-	-	-	-	ko00000	-	-	-	Sulf_transp
MMGS2_k127_3019991_4	571166.KI421509_gene1126	5.594e-11	63.0	COG2391@1|root,COG2391@2|Bacteria,1R5DN@1224|Proteobacteria,2U2XY@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	YeeE YedE family protein	-	-	-	ko:K07112	-	-	-	-	ko00000	-	-	-	Sulf_transp
MMGS2_k127_3019991_1	243231.GSU2311	5.322e-35	141.0	COG2391@1|root,COG2391@2|Bacteria,1RIWE@1224|Proteobacteria,42QRV@68525|delta/epsilon subdivisions,2WMUE@28221|Deltaproteobacteria,43V97@69541|Desulfuromonadales	28221|Deltaproteobacteria	S	Sulphur transport	-	-	-	ko:K07112	-	-	-	-	ko00000	-	-	-	Sulf_transp
MMGS2_k127_3019991_0	1437425.CSEC_0402	2.843e-82	277.0	COG3049@1|root,COG3049@2|Bacteria,2JGED@204428|Chlamydiae	2|Bacteria	M	Penicillin V acylase and related amidases	-	-	3.5.1.24	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100	-	R02797,R03975,R03977,R04486,R04487,R05835	RC00090,RC00096	ko00000,ko00001,ko01000	-	-	-	CBAH
MMGS2_k127_3022258_0	331113.SNE_A18030	2.375e-135	445.0	COG2870@1|root,COG2870@2|Bacteria,2JFQT@204428|Chlamydiae	204428|Chlamydiae	H	pfkB family carbohydrate kinase	hldE	-	2.7.1.167,2.7.7.70	ko:K03272	ko00540,ko01100,map00540,map01100	M00064	R05644,R05646	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	PfkB
MMGS2_k127_3022258_1	945713.IALB_3193	4.68e-99	334.0	COG0451@1|root,COG0451@2|Bacteria	2|Bacteria	GM	ADP-glyceromanno-heptose 6-epimerase activity	hldD	-	5.1.3.20	ko:K03274	ko00540,ko01100,map00540,map01100	M00064	R05176	RC01291	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Epimerase
MMGS2_k127_3022258_2	1444711.CCJF01000004_gene2380	3.65e-73	256.0	COG1947@1|root,COG1947@2|Bacteria,2JFYM@204428|Chlamydiae	204428|Chlamydiae	F	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol	ispE	-	2.7.1.148	ko:K00919	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05634	RC00002,RC01439	ko00000,ko00001,ko00002,ko01000	-	-	-	GHMP_kinases_N
MMGS2_k127_3022258_3	331113.SNE_A18060	1.143e-42	160.0	COG0359@1|root,COG0359@2|Bacteria,2JG41@204428|Chlamydiae	204428|Chlamydiae	J	binds to the 23S rRNA	rplI	-	-	ko:K02939	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L9_C,Ribosomal_L9_N
MMGS2_k127_3022258_5	1437425.CSEC_1021	9.689e-24	103.0	COG0238@1|root,COG0238@2|Bacteria,2JGBA@204428|Chlamydiae	204428|Chlamydiae	J	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit	rpsR	-	-	ko:K02963	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S18
MMGS2_k127_3022258_4	1444711.CCJF01000004_gene2377	3.174e-29	118.0	COG0360@1|root,COG0360@2|Bacteria,2JG6I@204428|Chlamydiae	204428|Chlamydiae	J	Binds together with S18 to 16S ribosomal RNA	rpsF	-	-	ko:K02990	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	-	-	-	Ribosomal_S6
MMGS2_k127_3039946_0	909663.KI867151_gene3071	3.525e-72	257.0	COG0775@1|root,COG0775@2|Bacteria,1NT95@1224|Proteobacteria,42YW6@68525|delta/epsilon subdivisions,2WTRQ@28221|Deltaproteobacteria	28221|Deltaproteobacteria	F	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_3064983_2	546271.Selsp_1453	1.052e-35	141.0	COG0652@1|root,COG0652@2|Bacteria,1TRHW@1239|Firmicutes,4H408@909932|Negativicutes	909932|Negativicutes	M	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides	ppiB	-	-	-	-	-	-	-	-	-	-	-	Pro_isomerase
MMGS2_k127_3064983_0	331113.SNE_A09810	1.82e-183	587.0	COG0531@1|root,COG0531@2|Bacteria,2JFCI@204428|Chlamydiae	204428|Chlamydiae	E	Amino acid permease	xasA	-	-	ko:K20265	ko02024,map02024	-	-	-	ko00000,ko00001,ko02000	2.A.3.7.1,2.A.3.7.3	-	-	AA_permease_2
MMGS2_k127_3064983_1	331113.SNE_A09800	4.016e-136	441.0	COG2256@1|root,COG2256@2|Bacteria,2JFSV@204428|Chlamydiae	204428|Chlamydiae	L	MgsA AAA+ ATPase C terminal	rarA	-	-	ko:K07478	-	-	-	-	ko00000	-	-	-	AAA,AAA_assoc_2,MgsA_C,RuvB_N
MMGS2_k127_3069985_1	1444712.BN1013_00581	1.206e-16	79.0	COG0667@1|root,COG0667@2|Bacteria,2JGZ2@204428|Chlamydiae	204428|Chlamydiae	C	Aldo/keto reductase family	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
MMGS2_k127_3069985_0	716544.wcw_1792	2.421e-54	208.0	COG1396@1|root,COG1396@2|Bacteria,2JH7U@204428|Chlamydiae	204428|Chlamydiae	K	sequence-specific DNA binding	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_3080482_0	933262.AXAM01000022_gene3247	1.238e-154	501.0	COG1672@1|root,COG1672@2|Bacteria,1MWJX@1224|Proteobacteria,42R4K@68525|delta/epsilon subdivisions,2WPWZ@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	ATPase domain predominantly from Archaea	-	-	-	ko:K06921	-	-	-	-	ko00000	-	-	-	ATPase_2,DUF234
MMGS2_k127_3080482_1	331113.SNE_A10990	1.681e-145	466.0	COG0623@1|root,COG0623@2|Bacteria,2JFHT@204428|Chlamydiae	204428|Chlamydiae	I	Enoyl- acyl-carrier-protein reductase NADH	fabI	-	1.3.1.10,1.3.1.9	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	M00083,M00572	R01404,R04429,R04430,R04724,R04725,R04955,R04956,R04958,R04959,R04961,R04962,R04966,R04967,R04969,R04970,R07765,R10118,R10122,R11671	RC00052,RC00076,RC00120	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
MMGS2_k127_3080482_2	331113.SNE_A11020	5.158e-36	152.0	COG1466@1|root,COG1466@2|Bacteria,2JG2N@204428|Chlamydiae	204428|Chlamydiae	L	dna polymerase III delta subunit	-	-	2.7.7.7	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta
MMGS2_k127_3082450_0	1499967.BAYZ01000026_gene1631	1.439e-84	299.0	COG0367@1|root,COG0367@2|Bacteria,2NNKE@2323|unclassified Bacteria	2|Bacteria	E	PFAM asparagine synthase	asnB	-	6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	-	R00578	RC00010	ko00000,ko00001,ko01000,ko01002	-	-	-	Asn_synthase,GATase_7
MMGS2_k127_3082450_1	396588.Tgr7_3169	1.073e-50	189.0	COG0110@1|root,COG0110@2|Bacteria,1N6SQ@1224|Proteobacteria,1SCHA@1236|Gammaproteobacteria,1WZU8@135613|Chromatiales	135613|Chromatiales	S	Bacterial transferase hexapeptide (six repeats)	-	-	-	ko:K18234	-	-	-	-	ko00000,ko01000,ko01504	-	-	-	Hexapep
MMGS2_k127_3082450_2	886293.Sinac_3502	7.388e-46	179.0	COG0500@1|root,COG2226@2|Bacteria,2IXEP@203682|Planctomycetes	203682|Planctomycetes	Q	O-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Dimerisation2,Methyltransf_2
MMGS2_k127_3085882_2	227941.CCA_00836	3.485e-19	93.0	COG0526@1|root,COG0526@2|Bacteria,2JFZU@204428|Chlamydiae	204428|Chlamydiae	CO	Thioredoxin-like	dsbJ	-	5.3.4.1	ko:K01829	-	-	-	-	ko00000,ko01000	-	-	-	Thioredoxin_7
MMGS2_k127_3085882_1	1444711.CCJF01000005_gene125	3.397e-51	191.0	COG1442@1|root,COG1442@2|Bacteria,2JG80@204428|Chlamydiae	204428|Chlamydiae	M	glycosyl transferase family 8	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_8
MMGS2_k127_3085882_6	1211813.CAPH01000006_gene1562	7.927e-05	52.0	COG1266@1|root,COG1266@2|Bacteria,4NMMK@976|Bacteroidetes,2FP40@200643|Bacteroidia,22VAS@171550|Rikenellaceae	976|Bacteroidetes	S	CAAX protease self-immunity	sagE	-	-	ko:K07052	-	-	-	-	ko00000	-	-	-	Abi
MMGS2_k127_3085882_0	1444711.CCJF01000004_gene2364	8.934e-234	739.0	COG0210@1|root,COG0210@2|Bacteria,2JFGH@204428|Chlamydiae	204428|Chlamydiae	L	UvrD-like helicase C-terminal domain	pcrA-A	-	3.6.4.12	ko:K03657	ko03420,ko03430,map03420,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	UvrD-helicase,UvrD_C
MMGS2_k127_3085882_4	1229831.M832_06040	2.259e-10	67.0	COG0594@1|root,COG0594@2|Bacteria	2|Bacteria	J	ribonuclease P activity	rnpA	GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031123,GO:0031404,GO:0031974,GO:0031981,GO:0032991,GO:0033204,GO:0034414,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042301,GO:0042779,GO:0042780,GO:0042781,GO:0043167,GO:0043168,GO:0043170,GO:0043199,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043628,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901681,GO:1902494,GO:1902555,GO:1905267,GO:1905348,GO:1990904	3.1.26.5	ko:K03536,ko:K08998	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Ribonuclease_P
MMGS2_k127_3085882_5	1408417.JHYB01000005_gene32	1.028e-09	62.0	COG0230@1|root,COG0230@2|Bacteria,3WU02@544448|Tenericutes	544448|Tenericutes	J	Belongs to the bacterial ribosomal protein bL34 family	rpmH	-	-	ko:K02914	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L34
MMGS2_k127_3085882_3	716544.wcw_0804	1.956e-15	77.0	COG0257@1|root,COG0257@2|Bacteria,2JGHY@204428|Chlamydiae	204428|Chlamydiae	J	Ribosomal protein L36	rpmJ	-	-	ko:K02919	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L36
MMGS2_k127_3174324_0	1444711.CCJF01000005_gene328	2.643e-53	192.0	COG0817@1|root,COG0817@2|Bacteria,2JG3D@204428|Chlamydiae	204428|Chlamydiae	L	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group	ruvC	-	3.1.22.4	ko:K01159	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	RuvC
MMGS2_k127_3174324_1	716544.wcw_1787	2.689e-49	182.0	COG0632@1|root,COG0632@2|Bacteria,2JG4N@204428|Chlamydiae	204428|Chlamydiae	L	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB	ruvA	-	3.6.4.12	ko:K03550	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	HHH_5,RuvA_C,RuvA_N
MMGS2_k127_3174324_2	331113.SNE_A09540	2.429e-16	90.0	COG1073@1|root,COG1073@2|Bacteria,2JGI8@204428|Chlamydiae	204428|Chlamydiae	S	Chlamydia CHLPS protein (DUF818)	-	-	-	-	-	-	-	-	-	-	-	-	DUF818
MMGS2_k127_3177518_0	1124780.ANNU01000010_gene3620	7.713e-178	565.0	COG0582@1|root,COG0582@2|Bacteria,4NDZJ@976|Bacteroidetes,47KC7@768503|Cytophagia	976|Bacteroidetes	L	Phage integrase SAM-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase
MMGS2_k127_3177518_1	1121481.AUAS01000005_gene1911	1.365e-12	70.0	COG3549@1|root,COG3549@2|Bacteria,4NW85@976|Bacteroidetes	976|Bacteroidetes	S	PFAM Plasmid maintenance system killer	-	-	-	ko:K07334	-	-	-	-	ko00000,ko02048	-	-	-	HigB-like_toxin
MMGS2_k127_318320_3	331113.SNE_A08740	1.433e-08	58.0	COG1560@1|root,COG1560@2|Bacteria,2JH1S@204428|Chlamydiae	204428|Chlamydiae	M	Bacterial lipid A biosynthesis acyltransferase	CP_0676	-	2.3.1.241	ko:K02517	ko00540,ko01100,map00540,map01100	M00060	R05146	RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Lip_A_acyltrans
MMGS2_k127_318320_1	331113.SNE_A08750	6.925e-101	341.0	COG0438@1|root,COG0438@2|Bacteria	2|Bacteria	M	transferase activity, transferring glycosyl groups	rfaG	-	-	ko:K02844	ko00540,ko01100,map00540,map01100	M00080	-	-	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT4	-	Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1
MMGS2_k127_318320_0	331113.SNE_A08760	9.229e-157	505.0	COG1624@1|root,COG1624@2|Bacteria,2JFIM@204428|Chlamydiae	204428|Chlamydiae	S	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria	CP_0674	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_318320_2	331113.SNE_A08770	4.625e-12	66.0	COG1624@1|root,COG1624@2|Bacteria,2JFE0@204428|Chlamydiae	204428|Chlamydiae	S	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria	dacA	-	-	-	-	-	-	-	-	-	-	-	DisA_N
MMGS2_k127_324415_0	331113.SNE_A05370	0.0	1240.0	COG2902@1|root,COG2902@2|Bacteria,2JFGR@204428|Chlamydiae	204428|Chlamydiae	C	Bacterial NAD-glutamate dehydrogenase	gdhB	-	1.4.1.2	ko:K15371	ko00220,ko00250,ko00430,ko00910,ko01100,map00220,map00250,map00430,map00910,map01100	-	R00243	RC00006,RC02799	ko00000,ko00001,ko01000	-	-	-	Bac_GDH,ELFV_dehydrog
MMGS2_k127_324415_1	331113.SNE_A05380	3.382e-39	147.0	COG2217@1|root,COG2217@2|Bacteria,2JFGU@204428|Chlamydiae	204428|Chlamydiae	P	E1-E2 ATPase	cadA	-	3.6.3.3,3.6.3.5	ko:K01534	-	-	-	-	ko00000,ko01000	3.A.3.6	-	-	E1-E2_ATPase,Hydrolase
MMGS2_k127_3275595_0	264201.pc1151	2.809e-20	101.0	29XK7@1|root,30JBA@2|Bacteria,2JG3A@204428|Chlamydiae	204428|Chlamydiae	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_3285041_0	331113.SNE_A03040	5.08e-162	522.0	COG0306@1|root,COG0306@2|Bacteria,2JFPI@204428|Chlamydiae	204428|Chlamydiae	P	Phosphate	CP_0067	-	-	ko:K03306	-	-	-	-	ko00000	2.A.20	-	-	PHO4
MMGS2_k127_3299329_2	331113.SNE_A00500	1.939e-28	119.0	COG0457@1|root,COG0457@2|Bacteria	331113.SNE_A00500|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_3299329_0	4432.XP_010243709.1	2.096e-132	437.0	COG0297@1|root,2QQTU@2759|Eukaryota,37R9T@33090|Viridiplantae,3GG40@35493|Streptophyta	35493|Streptophyta	O	Belongs to the glycosyltransferase 1 family. Bacterial plant glycogen synthase subfamily	-	GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005976,GO:0005982,GO:0006073,GO:0008150,GO:0008152,GO:0009011,GO:0009058,GO:0009059,GO:0009250,GO:0009507,GO:0009536,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0019252,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0071704,GO:1901576	2.4.1.21	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	M00565	R02421	RC00005	ko00000,ko00001,ko00002,ko01000,ko01003	-	GT5	-	Glyco_transf_5,Glycos_transf_1
MMGS2_k127_3299329_1	331113.SNE_A18150	8.486e-57	203.0	COG0558@1|root,COG0558@2|Bacteria,2JFZD@204428|Chlamydiae	204428|Chlamydiae	I	Belongs to the CDP-alcohol phosphatidyltransferase class-I family	pgsA	-	2.7.8.5	ko:K00995	ko00564,ko01100,map00564,map01100	-	R01801	RC00002,RC00017,RC02795	ko00000,ko00001,ko01000	-	-	-	CDP-OH_P_transf
MMGS2_k127_3307755_1	69042.WH5701_06631	8.246e-59	211.0	COG1373@1|root,COG1373@2|Bacteria,1GRNG@1117|Cyanobacteria,1H2G8@1129|Synechococcus	1117|Cyanobacteria	S	Domain of unknown function (DUF4143)	-	-	-	-	-	-	-	-	-	-	-	-	AAA_14,DUF4143
MMGS2_k127_3307755_2	264462.Bd0909	2.813e-31	127.0	COG1764@1|root,COG1764@2|Bacteria,1RJIP@1224|Proteobacteria	1224|Proteobacteria	O	redox protein regulator of disulfide bond formation	-	-	-	-	-	-	-	-	-	-	-	-	OsmC
MMGS2_k127_3307755_0	331113.SNE_A16650	5.339e-140	456.0	COG0265@1|root,COG0265@2|Bacteria,2JFTT@204428|Chlamydiae	204428|Chlamydiae	O	Periplasmic serine endoprotease DegP-like	htrA	GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564	3.4.21.107	ko:K04771	ko01503,ko02020,map01503,map02020	M00728	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	-	-	-	PDZ_2,Trypsin_2
MMGS2_k127_3318956_2	331113.SNE_A19280	4.953e-70	263.0	COG4625@1|root,COG4625@2|Bacteria,2JGCS@204428|Chlamydiae	204428|Chlamydiae	U	Autotransporter beta-domain	-	-	-	-	-	-	-	-	-	-	-	-	Autotransporter,PATR
MMGS2_k127_3318956_1	264201.pc0226	7.298e-103	346.0	COG0369@1|root,COG0369@2|Bacteria,2JFKP@204428|Chlamydiae	204428|Chlamydiae	P	sulfite reductase	cysJ	-	1.8.1.2	ko:K00380	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00176	R00858	RC00065	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_1,NAD_binding_1
MMGS2_k127_3318956_0	331113.SNE_A21950	7.71e-254	790.0	COG0008@1|root,COG0008@2|Bacteria,2JFU2@204428|Chlamydiae	204428|Chlamydiae	J	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)	gltX	-	6.1.1.17	ko:K01885	ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120	M00121,M00359,M00360	R05578	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016	-	-	-	tRNA-synt_1c
MMGS2_k127_3318956_3	318829.MGG_03977T0	0.0002845	49.0	KOG1721@1|root,KOG1721@2759|Eukaryota,3931M@33154|Opisthokonta,3NW8N@4751|Fungi,3QPS4@4890|Ascomycota,211WX@147550|Sordariomycetes,41NSC@639021|Magnaporthales	4751|Fungi	K	Zinc finger, C2H2 type	AZF1	GO:0000976,GO:0000977,GO:0000978,GO:0000981,GO:0000982,GO:0000987,GO:0001012,GO:0001067,GO:0001077,GO:0001228,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009743,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060237,GO:0060255,GO:0065007,GO:0070887,GO:0071310,GO:0071322,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901700,GO:1901701,GO:1902680,GO:1903338,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	zf-C2H2
MMGS2_k127_3347159_1	983920.Y88_1172	1.96e-73	257.0	COG1249@1|root,COG1249@2|Bacteria,1MVVE@1224|Proteobacteria,2TSG7@28211|Alphaproteobacteria,2K312@204457|Sphingomonadales	204457|Sphingomonadales	C	pyridine	-	-	1.6.1.1	ko:K00322	ko00760,ko01100,map00760,map01100	-	R00112	RC00001	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2,Pyr_redox_dim
MMGS2_k127_3347159_0	997346.HMPREF9374_3329	6.038e-91	309.0	COG0604@1|root,COG0604@2|Bacteria,1TPGA@1239|Firmicutes,4HBKZ@91061|Bacilli,27B8C@186824|Thermoactinomycetaceae	91061|Bacilli	C	Zinc-binding dehydrogenase	qor	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_zinc_N,ADH_zinc_N_2
MMGS2_k127_3347159_2	331113.SNE_A02960	8.486e-38	149.0	COG0859@1|root,COG0859@2|Bacteria	2|Bacteria	M	ADP-heptose-lipopolysaccharide heptosyltransferase activity	-	-	-	ko:K02843	ko00540,ko01100,map00540,map01100	M00080	-	-	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT9	-	Glyco_transf_9
MMGS2_k127_3351241_4	572479.Hprae_1080	2.256e-33	136.0	COG0289@1|root,COG0289@2|Bacteria,1TR9D@1239|Firmicutes,248FY@186801|Clostridia,3WAWV@53433|Halanaerobiales	186801|Clostridia	E	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate	dapB	-	1.17.1.8	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R04198,R04199	RC00478	ko00000,ko00001,ko00002,ko01000	-	-	-	DapB_C,DapB_N
MMGS2_k127_3351241_1	1444712.BN1013_01450	2.492e-106	351.0	COG2877@1|root,COG2877@2|Bacteria,2JFD5@204428|Chlamydiae	204428|Chlamydiae	M	Belongs to the KdsA family	kdsA	-	2.5.1.55	ko:K01627	ko00540,ko01100,map00540,map01100	M00063	R03254	RC00435	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	DAHP_synth_1
MMGS2_k127_3351241_5	331113.SNE_A19440	1.589e-24	111.0	2ETBM@1|root,33KVJ@2|Bacteria,2JGJI@204428|Chlamydiae	204428|Chlamydiae	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_3351241_3	331113.SNE_A19450	3.811e-59	222.0	2EJY2@1|root,32RJ1@2|Bacteria,2JG98@204428|Chlamydiae	204428|Chlamydiae	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_3351241_0	1444711.CCJF01000005_gene845	6.366e-108	354.0	COG1137@1|root,COG1137@2|Bacteria,2JFFD@204428|Chlamydiae	204428|Chlamydiae	S	ABC transporter	lptB	-	-	ko:K06861	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	1.B.42.1	-	-	ABC_tran
MMGS2_k127_3351241_2	765952.PUV_24730	7.211e-101	341.0	COG3202@1|root,COG3202@2|Bacteria,2JFSE@204428|Chlamydiae	204428|Chlamydiae	P	TLC ATP/ADP transporter	-	-	-	ko:K03301	-	-	-	-	ko00000	2.A.12	-	-	TLC
MMGS2_k127_3357077_3	1211114.ALIP01000112_gene1798	3.214e-21	102.0	COG3746@1|root,COG3746@2|Bacteria,1R9AP@1224|Proteobacteria,1RS2N@1236|Gammaproteobacteria,1X2Z1@135614|Xanthomonadales	135614|Xanthomonadales	P	Phosphate-selective porin O and P	-	-	-	ko:K07221	-	-	-	-	ko00000,ko02000	1.B.5.1	-	-	Porin_O_P
MMGS2_k127_3357077_1	331113.SNE_A01190	1.334e-59	219.0	COG0457@1|root,COG0457@2|Bacteria,2JFXG@204428|Chlamydiae	204428|Chlamydiae	S	Tetratricopeptide repeat	CP_0145	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_3357077_4	946235.CAER01000045_gene1395	1.942e-16	83.0	COG0346@1|root,COG0346@2|Bacteria,1VAEF@1239|Firmicutes,4HGTX@91061|Bacilli,23KQ8@182709|Oceanobacillus	91061|Bacilli	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
MMGS2_k127_3357077_0	765952.PUV_21480	2.501e-115	380.0	COG3386@1|root,COG3386@2|Bacteria	2|Bacteria	G	gluconolactonase activity	gnl	GO:0003674,GO:0003824,GO:0004341,GO:0016787,GO:0016788,GO:0052689	3.1.1.17	ko:K01053	ko00030,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00030,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220	M00129	R01519,R02933,R03751	RC00537,RC00983	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	SGL
MMGS2_k127_3357077_2	1034943.BN1094_01896	2.054e-51	193.0	COG0697@1|root,COG0697@2|Bacteria,1MZXM@1224|Proteobacteria,1RZPB@1236|Gammaproteobacteria,1JF2Q@118969|Legionellales	118969|Legionellales	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
MMGS2_k127_3367605_3	742743.HMPREF9453_02107	8.165e-17	85.0	COG2865@1|root,COG2865@2|Bacteria,1TS3T@1239|Firmicutes,4H3J4@909932|Negativicutes	909932|Negativicutes	K	Putative DNA-binding domain	-	-	3.6.4.12	ko:K03655	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	AlbA_2,HATPase_c_4
MMGS2_k127_3367605_0	765952.PUV_09540	1.208e-112	381.0	COG4974@1|root,COG4974@2|Bacteria,2JHB9@204428|Chlamydiae	204428|Chlamydiae	L	IS66 C-terminal element	-	-	-	-	-	-	-	-	-	-	-	-	DDE_Tnp_IS66_C
MMGS2_k127_3367605_2	765952.PUV_09520	2.702e-24	106.0	COG3436@1|root,COG3436@2|Bacteria,2JHDT@204428|Chlamydiae	204428|Chlamydiae	L	IS66 Orf2 like protein	-	-	-	ko:K07484	-	-	-	-	ko00000	-	-	-	TnpB_IS66
MMGS2_k127_3367605_4	1298598.JCM21714_4763	0.000107	49.0	COG2963@1|root,COG2963@2|Bacteria,1VK5J@1239|Firmicutes,4HRD9@91061|Bacilli	91061|Bacilli	L	transposase activity	-	-	-	-	-	-	-	-	-	-	-	-	HTH_Tnp_1
MMGS2_k127_3367605_1	671143.DAMO_2322	2.988e-77	261.0	COG2865@1|root,COG2865@2|Bacteria,2NRI7@2323|unclassified Bacteria	2|Bacteria	K	Putative ATP-dependent DNA helicase recG C-terminal	-	-	3.6.4.12	ko:K03655	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	AlbA_2,DUF4365,HATPase_c_4
MMGS2_k127_3374486_1	765952.PUV_08820	9.037e-67	239.0	COG4641@1|root,COG4641@2|Bacteria,2JGU8@204428|Chlamydiae	204428|Chlamydiae	S	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_2
MMGS2_k127_3374486_0	1444711.CCJF01000005_gene1720	5.683e-135	436.0	COG1284@1|root,COG1284@2|Bacteria,2JFIE@204428|Chlamydiae	204428|Chlamydiae	S	Uncharacterized protein conserved in bacteria (DUF2179)	yqfU	-	-	-	-	-	-	-	-	-	-	-	DUF2179,YitT_membrane
MMGS2_k127_3374486_2	1444711.CCJF01000005_gene1719	2.386e-11	69.0	2EVWB@1|root,33PA0@2|Bacteria,2JGI1@204428|Chlamydiae	204428|Chlamydiae	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_3374486_4	1437425.CSEC_2235	0.0004857	43.0	COG0496@1|root,COG0496@2|Bacteria,2JFU0@204428|Chlamydiae	204428|Chlamydiae	F	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates	surE	-	3.1.3.5	ko:K03787	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346	RC00017	ko00000,ko00001,ko01000	-	-	-	SurE
MMGS2_k127_3386405_0	1124780.ANNU01000006_gene2895	5.188e-156	505.0	COG0232@1|root,COG0232@2|Bacteria,4NENM@976|Bacteroidetes,47KD3@768503|Cytophagia	976|Bacteroidetes	F	Deoxyguanosinetriphosphate triphosphohydrolase-like protein	dgt	-	3.1.5.1	ko:K01129	ko00230,map00230	-	R01856	RC00017	ko00000,ko00001,ko01000	-	-	-	HD,HD_assoc
MMGS2_k127_3401905_0	331113.SNE_A20270	2.561e-128	417.0	COG0112@1|root,COG0112@2|Bacteria,2JFEM@204428|Chlamydiae	204428|Chlamydiae	E	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism	glyA	-	2.1.2.1	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	M00140,M00141,M00346,M00532	R00945,R09099	RC00022,RC00112,RC01583,RC02958	ko00000,ko00001,ko00002,ko01000	-	-	-	SHMT
MMGS2_k127_3401905_2	331113.SNE_A20410	5.442e-83	283.0	COG1579@1|root,COG1579@2|Bacteria,2JFRJ@204428|Chlamydiae	204428|Chlamydiae	S	C4-type zinc ribbon domain	CP_0228	-	-	ko:K07164	-	-	-	-	ko00000	-	-	-	zf-RING_7
MMGS2_k127_3401905_1	331113.SNE_A20420	5.648e-120	392.0	COG4974@1|root,COG4974@2|Bacteria,2JFEU@204428|Chlamydiae	204428|Chlamydiae	D	Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids	xerC	-	-	ko:K03733	-	-	-	-	ko00000,ko03036	-	-	-	Phage_int_SAM_1,Phage_integrase
MMGS2_k127_3401905_3	765952.PUV_03180	4.508e-76	259.0	COG0488@1|root,COG0488@2|Bacteria,2JFJQ@204428|Chlamydiae	204428|Chlamydiae	S	ABC transporter, ATP-binding protein	yjjK	-	-	-	-	-	-	-	-	-	-	-	ABC_tran,ABC_tran_Xtn
MMGS2_k127_3434713_1	716544.wcw_0023	6.526e-68	239.0	2CK4I@1|root,2ZBXP@2|Bacteria,2JFZG@204428|Chlamydiae	204428|Chlamydiae	S	Virulence plasmid protein pGP6-D-related protein	CP_1067	-	-	-	-	-	-	-	-	-	-	-	UPF0137
MMGS2_k127_3434713_0	768670.Calni_0061	5.241e-145	473.0	COG0015@1|root,COG0015@2|Bacteria,2GF5P@200930|Deferribacteres	200930|Deferribacteres	F	Adenylosuccinate lyase C-terminus	-	-	4.3.2.2	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	M00048,M00049	R01083,R04559	RC00379,RC00444,RC00445	ko00000,ko00001,ko00002,ko01000	-	-	-	ADSL_C,Lyase_1
MMGS2_k127_3434713_2	1444712.BN1013_00189	2.979e-66	230.0	COG1452@1|root,COG1452@2|Bacteria,2JGPM@204428|Chlamydiae	204428|Chlamydiae	M	Glycosyl hydrolase family 63 C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_63
MMGS2_k127_3437190_2	264201.pc0475	1.066e-07	53.0	COG1925@1|root,COG1925@2|Bacteria,2JG8W@204428|Chlamydiae	204428|Chlamydiae	G	PTS HPr component phosphorylation site	-	-	-	ko:K11189	-	-	-	-	ko00000,ko02000	4.A.2.1	-	-	PTS-HPr
MMGS2_k127_3437190_0	331113.SNE_A05660	1.184e-161	527.0	COG1080@1|root,COG1080@2|Bacteria,2JFGB@204428|Chlamydiae	204428|Chlamydiae	G	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)	ptsI	-	2.7.3.9	ko:K08483	ko02060,map02060	-	-	-	ko00000,ko00001,ko01000,ko02000	8.A.7	-	-	PEP-utilisers_N,PEP-utilizers,PEP-utilizers_C
MMGS2_k127_3437190_1	331113.SNE_A04440	9.672e-79	274.0	COG2518@1|root,COG2518@2|Bacteria	2|Bacteria	O	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins	-	-	2.1.1.77	ko:K00573	-	-	-	-	ko00000,ko01000	-	-	-	Methyltransf_25,Methyltransf_31,rRNA_methylase
MMGS2_k127_3439866_3	234267.Acid_4230	3.474e-150	488.0	COG1249@1|root,COG1249@2|Bacteria,3Y3KM@57723|Acidobacteria	57723|Acidobacteria	C	Pyridine nucleotide-disulphide oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	Pyr_redox_2,Pyr_redox_dim
MMGS2_k127_3439866_4	717606.PaecuDRAFT_1128	2.522e-08	59.0	COG3011@1|root,COG3011@2|Bacteria,1V7DJ@1239|Firmicutes,4HIUD@91061|Bacilli,26YKY@186822|Paenibacillaceae	91061|Bacilli	S	Thiol-disulfide oxidoreductase DCC	yuxK	-	-	-	-	-	-	-	-	-	-	-	DUF393
MMGS2_k127_3439866_2	1444711.CCJF01000004_gene2455	2.083e-212	674.0	COG0358@1|root,COG0358@2|Bacteria,2JFUG@204428|Chlamydiae	204428|Chlamydiae	L	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	dnaG	-	-	ko:K02316	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	DnaB_bind,Toprim_2,Toprim_N,zf-CHC2
MMGS2_k127_3439866_0	1444711.CCJF01000005_gene1089	4.733e-280	884.0	COG0249@1|root,COG0249@2|Bacteria,2JFCU@204428|Chlamydiae	204428|Chlamydiae	L	that it carries out the mismatch recognition step. This protein has a weak ATPase activity	mutS	-	-	ko:K03555	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	MutS_I,MutS_II,MutS_III,MutS_IV,MutS_V
MMGS2_k127_3439866_1	331113.SNE_A18280	6.994e-217	689.0	COG0322@1|root,COG0322@2|Bacteria,2JFUB@204428|Chlamydiae	204428|Chlamydiae	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision	uvrC	-	-	ko:K03703	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	GIY-YIG,HHH_5,UVR,UvrC_HhH_N
MMGS2_k127_3442204_0	1123368.AUIS01000009_gene2470	1.167e-91	308.0	COG1301@1|root,COG1301@2|Bacteria,1MU0Q@1224|Proteobacteria,1RMEN@1236|Gammaproteobacteria	1236|Gammaproteobacteria	U	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family	gltP	-	-	ko:K03309	-	-	-	-	ko00000	2.A.23	-	-	SDF
MMGS2_k127_3442204_2	264462.Bd1967	1.145e-85	289.0	COG1187@1|root,COG1187@2|Bacteria,1MUCE@1224|Proteobacteria,42NI7@68525|delta/epsilon subdivisions,2MTQ3@213481|Bdellovibrionales,2WNPX@28221|Deltaproteobacteria	213481|Bdellovibrionales	J	Belongs to the pseudouridine synthase RsuA family	rluB	-	5.4.99.21,5.4.99.22	ko:K06178,ko:K06182	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2,S4
MMGS2_k127_3442204_1	1437425.CSEC_2079	1.799e-87	301.0	COG0337@1|root,COG0337@2|Bacteria,2JFXP@204428|Chlamydiae	204428|Chlamydiae	E	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)	aroB	-	4.2.3.4	ko:K01735	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R03083	RC00847	ko00000,ko00001,ko00002,ko01000	-	-	-	DHQ_synthase
MMGS2_k127_3442204_3	1444711.CCJF01000005_gene259	1.184e-60	222.0	COG0564@1|root,COG0564@2|Bacteria,2JG28@204428|Chlamydiae	204428|Chlamydiae	J	RNA pseudouridylate synthase	-	-	5.4.99.23,5.4.99.28,5.4.99.29	ko:K06177,ko:K06180	-	-	-	-	ko00000,ko01000,ko03009,ko03016	-	-	-	PseudoU_synth_2
MMGS2_k127_3442204_4	1232410.KI421421_gene3694	3.391e-42	160.0	COG0545@1|root,COG0545@2|Bacteria,1RDA1@1224|Proteobacteria,42QU4@68525|delta/epsilon subdivisions,2WMRQ@28221|Deltaproteobacteria,43SHI@69541|Desulfuromonadales	28221|Deltaproteobacteria	M	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase	-	-	5.2.1.8	ko:K03772,ko:K03773	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	FKBP_C,FKBP_N
MMGS2_k127_3451262_0	765952.PUV_04160	7.163e-184	584.0	COG1160@1|root,COG1160@2|Bacteria,2JFJG@204428|Chlamydiae	204428|Chlamydiae	S	GTPase that plays an essential role in the late steps of ribosome biogenesis	der	-	-	ko:K03977	-	-	-	-	ko00000,ko03009	-	-	-	KH_dom-like,MMR_HSR1
MMGS2_k127_3451262_1	331113.SNE_A12700	8.57e-135	441.0	COG1373@1|root,COG1373@2|Bacteria,2JH9D@204428|Chlamydiae	204428|Chlamydiae	S	Domain of unknown function (DUF4143)	-	-	-	ko:K07133	-	-	-	-	ko00000	-	-	-	DUF4143
MMGS2_k127_3451262_2	765952.PUV_11970	1.563e-12	70.0	2CI30@1|root,2ZTEA@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_352099_0	1444711.CCJF01000005_gene895	2.606e-154	511.0	COG4284@1|root,COG4284@2|Bacteria,2JFIR@204428|Chlamydiae	204428|Chlamydiae	G	UTP--glucose-1-phosphate uridylyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	UDPGP
MMGS2_k127_352099_3	331113.SNE_A18870	2.863e-28	115.0	COG5531@1|root,COG5531@2|Bacteria,2JGCA@204428|Chlamydiae	204428|Chlamydiae	B	SWI complex, BAF60b domains	-	-	-	-	-	-	-	-	-	-	-	-	SWIB
MMGS2_k127_352099_2	40149.OMERI01G36180.1	5.162e-67	235.0	COG1211@1|root,2QUUE@2759|Eukaryota,37JBI@33090|Viridiplantae,3G9FM@35493|Streptophyta,3KYDY@4447|Liliopsida,3IA1I@38820|Poales	35493|Streptophyta	I	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	ISPD	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046490,GO:0050518,GO:0070567,GO:0071704,GO:0090407,GO:1901135,GO:1901576	2.7.7.60	ko:K00991	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05633	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	IspD
MMGS2_k127_352099_1	1444711.CCJF01000005_gene899	1.367e-83	285.0	COG0101@1|root,COG0101@2|Bacteria,2JFJC@204428|Chlamydiae	204428|Chlamydiae	J	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs	truA1	-	5.4.99.12	ko:K06173	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	PseudoU_synth_1
MMGS2_k127_3530870_1	679926.Mpet_2335	9.097e-110	364.0	COG0531@1|root,arCOG00009@2157|Archaea,2XUU6@28890|Euryarchaeota,2NAJQ@224756|Methanomicrobia	224756|Methanomicrobia	E	PFAM amino acid permease-associated region	-	-	-	ko:K20265	ko02024,map02024	-	-	-	ko00000,ko00001,ko02000	2.A.3.7.1,2.A.3.7.3	-	-	AA_permease_2
MMGS2_k127_3530870_2	331113.SNE_A13250	3.789e-105	351.0	COG2239@1|root,COG2239@2|Bacteria,2JG1N@204428|Chlamydiae	204428|Chlamydiae	P	Divalent cation transporter	-	-	-	ko:K06213	-	-	-	-	ko00000,ko02000	1.A.26.1	-	-	CBS,MgtE
MMGS2_k127_3530870_3	264201.pc1046	4.16e-88	298.0	COG0500@1|root,COG2226@2|Bacteria,2JHHE@204428|Chlamydiae	204428|Chlamydiae	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_25
MMGS2_k127_3530870_0	1437425.CSEC_1348	2.501e-213	679.0	COG0449@1|root,COG0449@2|Bacteria,2JFJR@204428|Chlamydiae	204428|Chlamydiae	M	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source	glmS	-	2.6.1.16	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	-	R00768	RC00010,RC00163,RC02752	ko00000,ko00001,ko01000,ko01002	-	-	-	GATase_6,SIS
MMGS2_k127_3530870_4	331113.SNE_A11690	1.116e-57	213.0	COG2114@1|root,COG2770@1|root,COG3290@1|root,COG2114@2|Bacteria,COG2770@2|Bacteria,COG3290@2|Bacteria	2|Bacteria	T	protein histidine kinase activity	cyaA	-	2.1.1.80,3.1.1.61,4.6.1.1	ko:K01768,ko:K13924	ko00230,ko02020,ko02025,ko02030,ko04113,ko04213,map00230,map02020,map02025,map02030,map04113,map04213	M00506,M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	Guanylate_cyc,HAMP,HATPase_c,HWE_HK,HisKA,PAS,PAS_3,dCache_1
MMGS2_k127_3551988_1	1123368.AUIS01000038_gene37	1.721e-68	238.0	COG1073@1|root,COG1073@2|Bacteria,1RDAY@1224|Proteobacteria,1S4YT@1236|Gammaproteobacteria,2ND78@225057|Acidithiobacillales	225057|Acidithiobacillales	S	Dienelactone hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	DLH
MMGS2_k127_3551988_2	484770.UFO1_3612	8.4e-26	114.0	2AFQE@1|root,315S9@2|Bacteria,1VN9M@1239|Firmicutes	1239|Firmicutes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_3551988_0	716544.wcw_0439	1.404e-152	489.0	COG0482@1|root,COG0482@2|Bacteria,2JFX1@204428|Chlamydiae	204428|Chlamydiae	J	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34	trmU	-	2.8.1.13	ko:K00566	ko04122,map04122	-	R08700	RC02313,RC02315	ko00000,ko00001,ko01000,ko03016	-	-	-	tRNA_Me_trans
MMGS2_k127_3587566_0	331113.SNE_A10740	3.631e-103	349.0	COG0477@1|root,COG0477@2|Bacteria,2JGWH@204428|Chlamydiae	204428|Chlamydiae	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
MMGS2_k127_3587566_3	331113.SNE_A03620	3.906e-58	209.0	COG0564@1|root,COG0564@2|Bacteria,2JG1U@204428|Chlamydiae	204428|Chlamydiae	J	RNA pseudouridylate synthase	-	-	5.4.99.23	ko:K06180	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2
MMGS2_k127_3587566_1	1444711.CCJF01000005_gene136	1.988e-98	329.0	COG0566@1|root,COG0566@2|Bacteria,2JFQK@204428|Chlamydiae	204428|Chlamydiae	J	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family	spoU_1	-	-	ko:K03437	-	-	-	-	ko00000,ko03016	-	-	-	SpoU_methylase,SpoU_sub_bind
MMGS2_k127_3587566_2	1444711.CCJF01000005_gene137	5.993e-89	299.0	COG1092@1|root,COG1092@2|Bacteria,2JFQ3@204428|Chlamydiae	204428|Chlamydiae	H	S-adenosylmethionine-dependent methyltransferase	CP_0221	-	2.1.1.191	ko:K06969	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltrans_SAM
MMGS2_k127_3615240_0	1444711.CCJF01000005_gene1811	1.591e-79	271.0	COG1515@1|root,COG1515@2|Bacteria,2JGYK@204428|Chlamydiae	204428|Chlamydiae	L	Endonuclease V	-	-	3.1.21.7	ko:K05982	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	Endonuclease_5
MMGS2_k127_3615240_1	215803.DB30_5568	5.074e-58	209.0	COG0242@1|root,COG0242@2|Bacteria,1NV75@1224|Proteobacteria,43B54@68525|delta/epsilon subdivisions,2X6IQ@28221|Deltaproteobacteria,2YV5U@29|Myxococcales	28221|Deltaproteobacteria	J	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions	-	-	3.5.1.88	ko:K01462	-	-	-	-	ko00000,ko01000	-	-	-	Pep_deformylase
MMGS2_k127_3615240_2	391625.PPSIR1_21554	5.609e-41	164.0	COG5361@1|root,COG5361@2|Bacteria,1NBVB@1224|Proteobacteria	1224|Proteobacteria	S	Neurotransmitter-gated ion-channel ligand binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Neur_chan_LBD,Neur_chan_memb
MMGS2_k127_3685252_0	331113.SNE_A22620	0.0	1493.0	COG0506@1|root,COG1012@1|root,COG0506@2|Bacteria,COG1012@2|Bacteria,2JFQE@204428|Chlamydiae	204428|Chlamydiae	CE	Belongs to the aldehyde dehydrogenase family	putA	-	1.2.1.88,1.5.5.2	ko:K13821	ko00250,ko00330,ko01100,ko01110,ko01130,map00250,map00330,map01100,map01110,map01130	-	R00245,R00707,R00708,R01253,R04444,R04445,R05051	RC00080,RC00083,RC00216,RC00242,RC00255	ko00000,ko00001,ko01000,ko03000	-	-	-	Aldedh,Pro_dh
MMGS2_k127_3690269_1	670292.JH26_16595	6.401e-62	218.0	COG2230@1|root,COG2230@2|Bacteria,1R1FZ@1224|Proteobacteria,2TZ1A@28211|Alphaproteobacteria	28211|Alphaproteobacteria	M	Mycolic acid cyclopropane synthetase	-	-	-	-	-	-	-	-	-	-	-	-	CMAS
MMGS2_k127_3690269_2	1121413.JMKT01000010_gene765	6.941e-40	150.0	COG4430@1|root,COG4430@2|Bacteria,1QZ57@1224|Proteobacteria,43DEF@68525|delta/epsilon subdivisions,2X8KC@28221|Deltaproteobacteria,2MHIS@213115|Desulfovibrionales	28221|Deltaproteobacteria	S	Putative tRNA binding domain	-	-	-	ko:K06878	-	-	-	-	ko00000	-	-	-	tRNA_bind
MMGS2_k127_3690269_0	765952.PUV_24770	3.24e-272	846.0	COG0017@1|root,COG2606@1|root,COG0017@2|Bacteria,COG2606@2|Bacteria,2JGS0@204428|Chlamydiae	204428|Chlamydiae	J	Aminoacyl-tRNA editing domain	-	-	6.1.1.23	ko:K09759	ko00970,map00970	M00360	R03647,R05577	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_2,tRNA_anti-codon,tRNA_edit
MMGS2_k127_3690313_2	688269.Theth_1053	5.436e-47	172.0	COG1490@1|root,COG1490@2|Bacteria,2GCYQ@200918|Thermotogae	200918|Thermotogae	J	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality	dtd	GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360	-	ko:K07560	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Tyr_Deacylase
MMGS2_k127_3690313_1	1444711.CCJF01000005_gene823	1.751e-77	267.0	COG1723@1|root,COG1723@2|Bacteria,2JG0Z@204428|Chlamydiae	204428|Chlamydiae	S	Uncharacterised ACR, YagE family COG1723	yagE	-	-	-	-	-	-	-	-	-	-	-	DUF155
MMGS2_k127_3690313_0	716544.wcw_1593	1.558e-256	797.0	COG1274@1|root,COG1274@2|Bacteria,2JFEW@204428|Chlamydiae	204428|Chlamydiae	F	Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle	pckG	-	4.1.1.32	ko:K01596	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko03320,ko04068,ko04151,ko04152,ko04910,ko04920,ko04922,ko04931,ko04964,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map03320,map04068,map04151,map04152,map04910,map04920,map04922,map04931,map04964	M00003	R00431,R00726	RC00002,RC02741	ko00000,ko00001,ko00002,ko01000	-	-	-	PEPCK_C,PEPCK_N
MMGS2_k127_3709535_1	1437425.CSEC_2034	2.488e-96	319.0	COG0702@1|root,COG0702@2|Bacteria,2JFGP@204428|Chlamydiae	204428|Chlamydiae	GM	Protein of unknown function (DUF2867)	ybjT	-	-	-	-	-	-	-	-	-	-	-	DUF2867,NAD_binding_10
MMGS2_k127_3709535_2	765952.PUV_06100	4.154e-63	223.0	COG0288@1|root,COG0288@2|Bacteria,2JGJ5@204428|Chlamydiae	204428|Chlamydiae	P	Reversible hydration of carbon dioxide	cynT	-	4.2.1.1	ko:K01673	ko00910,map00910	-	R00132,R10092	RC02807	ko00000,ko00001,ko01000	-	-	-	Pro_CA
MMGS2_k127_3709535_3	1227453.C444_09360	8.002e-05	55.0	COG2304@1|root,arCOG02900@2157|Archaea,2XTZ0@28890|Euryarchaeota,23SRA@183963|Halobacteria	183963|Halobacteria	S	von Willebrand factor, type A	-	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	VWA
MMGS2_k127_3709535_0	331113.SNE_A15500	2.316e-112	368.0	COG1132@1|root,COG1132@2|Bacteria,2JFIQ@204428|Chlamydiae	204428|Chlamydiae	V	ABC transporter transmembrane region	-	-	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
MMGS2_k127_3747728_3	1366050.N234_25635	1.088e-13	74.0	COG3039@1|root,COG3039@2|Bacteria,1MXTN@1224|Proteobacteria,2VQ35@28216|Betaproteobacteria,1K68B@119060|Burkholderiaceae	28216|Betaproteobacteria	L	Transposase	-	-	-	-	-	-	-	-	-	-	-	-	DDE_Tnp_1,DDE_Tnp_1_5
MMGS2_k127_3747728_1	156889.Mmc1_2789	1.018e-46	174.0	COG3039@1|root,COG3039@2|Bacteria,1MXTN@1224|Proteobacteria,2TYT4@28211|Alphaproteobacteria	28211|Alphaproteobacteria	L	Transposase	-	-	-	-	-	-	-	-	-	-	-	-	DDE_Tnp_1,DDE_Tnp_1_5
MMGS2_k127_3747728_4	1348635.BBJY01000006_gene465	9.944e-06	49.0	COG3039@1|root,COG3039@2|Bacteria,1MXTN@1224|Proteobacteria,1RM94@1236|Gammaproteobacteria,1XVGA@135623|Vibrionales	135623|Vibrionales	L	User locus_tag	-	-	-	-	-	-	-	-	-	-	-	-	DDE_Tnp_1,DDE_Tnp_1_5
MMGS2_k127_3747728_2	1454007.JAUG01000012_gene2440	1.218e-27	119.0	29MEY@1|root,308CU@2|Bacteria,4NNFU@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_3747728_0	1094980.Mpsy_1938	2.338e-53	192.0	COG1373@1|root,arCOG03168@2157|Archaea,2Y8HI@28890|Euryarchaeota,2N9H5@224756|Methanomicrobia	224756|Methanomicrobia	S	Domain of unknown function (DUF4143)	-	-	-	ko:K07133	-	-	-	-	ko00000	-	-	-	AAA_14,DUF4143
MMGS2_k127_3809730_0	331113.SNE_A21610	2.273e-187	595.0	COG2271@1|root,COG2271@2|Bacteria,2JFUY@204428|Chlamydiae	204428|Chlamydiae	G	Hexose phosphate transport protein	uhpC	-	-	ko:K07783	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.1.4.4,2.A.1.4.6	-	-	MFS_1
MMGS2_k127_3809730_1	331113.SNE_A21600	1.018e-179	572.0	COG0587@1|root,COG0587@2|Bacteria,2JFDD@204428|Chlamydiae	204428|Chlamydiae	L	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The alpha chain is the DNA polymerase (By similarity)	dnaE	-	2.7.7.7	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_alpha,HHH_6,PHP
MMGS2_k127_381157_2	765952.PUV_01110	9.621e-12	72.0	COG1388@1|root,COG1388@2|Bacteria,2JGAD@204428|Chlamydiae	204428|Chlamydiae	M	Lysin motif	-	-	-	-	-	-	-	-	-	-	-	-	LysM
MMGS2_k127_381157_1	1444711.CCJF01000005_gene214	1.047e-81	279.0	COG2885@1|root,COG2885@2|Bacteria,2JG4H@204428|Chlamydiae	204428|Chlamydiae	M	Belongs to the ompA family	pal	-	-	ko:K03640	-	-	-	-	ko00000,ko02000	2.C.1.2	-	-	OmpA
MMGS2_k127_381157_0	1444711.CCJF01000005_gene213	1.45e-133	434.0	COG0823@1|root,COG0823@2|Bacteria,2JFJD@204428|Chlamydiae	204428|Chlamydiae	U	Involved in the TonB-independent uptake of proteins	tolB	-	-	ko:K03641	-	-	-	-	ko00000,ko02000	2.C.1.2	-	-	PD40
MMGS2_k127_3811853_0	1444711.CCJF01000005_gene1184	4.206e-261	822.0	COG1331@1|root,COG1331@2|Bacteria,2JFE4@204428|Chlamydiae	204428|Chlamydiae	O	Protein of unknown function, DUF255	yyaL	-	-	ko:K06888	-	-	-	-	ko00000	-	-	-	Thioredox_DsbH
MMGS2_k127_3811853_1	765952.PUV_18230	4.369e-79	269.0	COG1039@1|root,COG1039@2|Bacteria,2JFW4@204428|Chlamydiae	204428|Chlamydiae	L	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	rnhC	-	3.1.26.4	ko:K03471	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	DUF3378,RNase_HII
MMGS2_k127_3824068_0	929562.Emtol_0377	3.384e-103	346.0	COG0664@1|root,COG0745@1|root,COG0664@2|Bacteria,COG0745@2|Bacteria,4NFB1@976|Bacteroidetes,47JY7@768503|Cytophagia	976|Bacteroidetes	K	Transcriptional regulator, Crp Fnr family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,Response_reg,cNMP_binding
MMGS2_k127_3824068_1	1123278.KB893610_gene4511	3.679e-37	144.0	COG0642@1|root,COG2205@2|Bacteria,4NG0Y@976|Bacteroidetes,47JUV@768503|Cytophagia	976|Bacteroidetes	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS,PAS_9,Response_reg
MMGS2_k127_3832194_1	716544.wcw_1314	4.982e-16	82.0	COG0525@1|root,COG0525@2|Bacteria,2JFDH@204428|Chlamydiae	204428|Chlamydiae	J	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner	valS	-	6.1.1.9	ko:K01873	ko00970,map00970	M00359,M00360	R03665	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,Val_tRNA-synt_C,tRNA-synt_1
MMGS2_k127_3832194_0	497965.Cyan7822_3505	3.309e-38	153.0	COG5533@1|root,COG5533@2|Bacteria,1G67R@1117|Cyanobacteria	1117|Cyanobacteria	O	PFAM Opioid growth factor receptor (OGFr) conserved region	-	-	-	-	-	-	-	-	-	-	-	-	OGFr_N
MMGS2_k127_3832194_2	331113.SNE_A02860	4.792e-13	79.0	COG3468@1|root,COG3468@2|Bacteria,2JHAK@204428|Chlamydiae	204428|Chlamydiae	MU	outer membrane autotransporter barrel domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_3846883_0	331113.SNE_A17980	1.276e-115	384.0	COG0624@1|root,COG0624@2|Bacteria,2JFTI@204428|Chlamydiae	204428|Chlamydiae	E	Peptidase dimerisation domain	-	-	-	-	-	-	-	-	-	-	-	-	M20_dimer,Peptidase_M20
MMGS2_k127_3846883_3	264201.pc1585	3.932e-10	62.0	2DYDY@1|root,349AE@2|Bacteria,2JHAU@204428|Chlamydiae	204428|Chlamydiae	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_3846883_1	331113.SNE_A18000	1.481e-98	334.0	COG0501@1|root,COG0501@2|Bacteria,2JFUN@204428|Chlamydiae	204428|Chlamydiae	O	Peptidase family M48	-	-	-	ko:K03799	-	M00743	-	-	ko00000,ko00002,ko01000,ko01002	-	-	-	Peptidase_M48
MMGS2_k127_3846883_2	1285586.H131_21067	1.132e-32	137.0	COG0739@1|root,COG0739@2|Bacteria,1UX3M@1239|Firmicutes,4ICUN@91061|Bacilli,3IZYP@400634|Lysinibacillus	91061|Bacilli	M	Peptidase family M23	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
MMGS2_k127_3850003_1	1444712.BN1013_00418	7.463e-81	295.0	COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,2JFS4@204428|Chlamydiae	204428|Chlamydiae	DM	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)	wzc	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_3850003_0	1444712.BN1013_00419	5.699e-112	365.0	COG1596@1|root,COG1596@2|Bacteria,2JFRQ@204428|Chlamydiae	204428|Chlamydiae	M	Polysaccharide biosynthesis/export protein	wza	-	-	ko:K01991	ko02026,map02026	-	-	-	ko00000,ko00001,ko02000	1.B.18	-	-	Poly_export,SLBB
MMGS2_k127_3859924_3	765952.PUV_14770	1.005e-18	89.0	COG0125@1|root,COG0125@2|Bacteria,2JH6T@204428|Chlamydiae	204428|Chlamydiae	F	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis	tmk	-	2.7.4.9	ko:K00943	ko00240,ko01100,map00240,map01100	M00053	R02094,R02098	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	Thymidylate_kin
MMGS2_k127_3859924_2	331113.SNE_A14080	2.755e-28	124.0	COG0470@1|root,COG0470@2|Bacteria,2JGB3@204428|Chlamydiae	204428|Chlamydiae	L	DNA polymerase III	holB	-	2.7.7.7	ko:K02341,ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta2
MMGS2_k127_3859924_1	246437.XP_006170933.1	2.506e-34	142.0	COG5599@1|root,KOG0791@2759|Eukaryota,39S5A@33154|Opisthokonta,3BHUJ@33208|Metazoa,3D2JB@33213|Bilateria,480PT@7711|Chordata,48XHW@7742|Vertebrata,3JFCD@40674|Mammalia,35P76@314146|Euarchontoglires	33208|Metazoa	T	delta-catenin binding	PTPRJ	GO:0001558,GO:0001568,GO:0001570,GO:0001726,GO:0001772,GO:0001775,GO:0001932,GO:0001933,GO:0001944,GO:0001952,GO:0001954,GO:0002252,GO:0002253,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002429,GO:0002443,GO:0002444,GO:0002446,GO:0002682,GO:0002683,GO:0002684,GO:0002685,GO:0002687,GO:0002688,GO:0002690,GO:0002757,GO:0002764,GO:0002768,GO:0003008,GO:0003013,GO:0003018,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005102,GO:0005161,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005887,GO:0005911,GO:0006464,GO:0006469,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006935,GO:0006950,GO:0006955,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007399,GO:0007417,GO:0007507,GO:0007596,GO:0007599,GO:0008013,GO:0008015,GO:0008150,GO:0008152,GO:0008285,GO:0009605,GO:0009611,GO:0009653,GO:0009892,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0010001,GO:0010469,GO:0010543,GO:0010563,GO:0010572,GO:0010605,GO:0010640,GO:0010642,GO:0010646,GO:0010647,GO:0010648,GO:0010758,GO:0010759,GO:0010810,GO:0010811,GO:0012505,GO:0012506,GO:0016020,GO:0016021,GO:0016192,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019220,GO:0019222,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0022008,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030054,GO:0030141,GO:0030154,GO:0030155,GO:0030193,GO:0030194,GO:0030308,GO:0030334,GO:0030335,GO:0030336,GO:0030659,GO:0030667,GO:0031090,GO:0031224,GO:0031226,GO:0031252,GO:0031253,GO:0031256,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0031410,GO:0031982,GO:0032101,GO:0032103,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032587,GO:0032879,GO:0032940,GO:0033673,GO:0035239,GO:0035295,GO:0035335,GO:0035579,GO:0036211,GO:0036230,GO:0040008,GO:0040011,GO:0040012,GO:0040013,GO:0040017,GO:0042058,GO:0042059,GO:0042060,GO:0042063,GO:0042119,GO:0042127,GO:0042221,GO:0042325,GO:0042326,GO:0042330,GO:0042578,GO:0042581,GO:0042802,GO:0042995,GO:0043086,GO:0043114,GO:0043116,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043299,GO:0043312,GO:0043405,GO:0043407,GO:0043408,GO:0043409,GO:0043412,GO:0043549,GO:0044087,GO:0044089,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0045055,GO:0045295,GO:0045321,GO:0045785,GO:0045859,GO:0045926,GO:0045936,GO:0046903,GO:0048008,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048709,GO:0048731,GO:0048856,GO:0048869,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050817,GO:0050818,GO:0050820,GO:0050851,GO:0050852,GO:0050854,GO:0050856,GO:0050858,GO:0050860,GO:0050865,GO:0050867,GO:0050878,GO:0050896,GO:0050918,GO:0050920,GO:0050921,GO:0051019,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051270,GO:0051271,GO:0051272,GO:0051338,GO:0051348,GO:0051716,GO:0051893,GO:0051894,GO:0051896,GO:0051897,GO:0051898,GO:0060242,GO:0060255,GO:0061041,GO:0065007,GO:0065008,GO:0065009,GO:0070097,GO:0070851,GO:0071622,GO:0071675,GO:0071704,GO:0071900,GO:0071901,GO:0071944,GO:0072358,GO:0072359,GO:0080090,GO:0080134,GO:0090109,GO:0090303,GO:0097708,GO:0098588,GO:0098590,GO:0098805,GO:0099503,GO:0120025,GO:0120038,GO:0140096,GO:1900046,GO:1900048,GO:1901184,GO:1901185,GO:1901564,GO:1901888,GO:1901890,GO:1902531,GO:1902532,GO:1902533,GO:1903034,GO:1903036,GO:1903391,GO:1903393,GO:1905521,GO:1905523,GO:2000145,GO:2000146,GO:2000147,GO:2000272	3.1.3.48	ko:K05698	ko04520,map04520	-	-	-	ko00000,ko00001,ko01000,ko01009,ko04090	-	-	-	Y_phosphatase,fn3
MMGS2_k127_3859924_0	765952.PUV_10140	9.089e-73	250.0	COG0061@1|root,COG0061@2|Bacteria,2JFSA@204428|Chlamydiae	204428|Chlamydiae	F	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP	ppnK	-	2.7.1.23	ko:K00858	ko00760,ko01100,map00760,map01100	-	R00104	RC00002,RC00078	ko00000,ko00001,ko01000	-	-	-	NAD_kinase
MMGS2_k127_3869905_1	264201.pc1545	6.163e-15	78.0	2CG3Q@1|root,336U3@2|Bacteria,2JGDW@204428|Chlamydiae	204428|Chlamydiae	S	Histone H1-like protein Hc1	hctA	-	-	-	-	-	-	-	-	-	-	-	Hc1
MMGS2_k127_3869905_0	716544.wcw_0204	3.867e-52	192.0	COG2265@1|root,COG2265@2|Bacteria,2JFX6@204428|Chlamydiae	204428|Chlamydiae	J	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family	rumA	-	-	-	-	-	-	-	-	-	-	-	tRNA_U5-meth_tr
MMGS2_k127_3907035_0	1340493.JNIF01000004_gene43	0.0	1113.0	COG0058@1|root,COG0058@2|Bacteria,3Y65H@57723|Acidobacteria	57723|Acidobacteria	G	PFAM glycosyl transferase, family 35	-	-	2.4.1.1	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	-	R02111	-	ko00000,ko00001,ko01000	-	GT35	-	DUF3417,Phosphorylase
MMGS2_k127_3907035_2	1444711.CCJF01000004_gene1850	2.389e-43	161.0	COG0251@1|root,COG0251@2|Bacteria,2JG9B@204428|Chlamydiae	204428|Chlamydiae	J	Endoribonuclease L-PSP	-	-	3.5.99.10	ko:K09022	-	-	R11098,R11099	RC03275,RC03354	ko00000,ko01000	-	-	-	Ribonuc_L-PSP
MMGS2_k127_3907035_1	933262.AXAM01000012_gene1803	1.321e-56	200.0	COG1373@1|root,COG1373@2|Bacteria,1R9U4@1224|Proteobacteria	1224|Proteobacteria	S	ATPase (AAA superfamily	-	-	-	-	-	-	-	-	-	-	-	-	AAA_14,DUF4143
MMGS2_k127_3907035_4	1411685.U062_02363	2.142e-12	68.0	COG1373@1|root,COG1373@2|Bacteria,1R9U4@1224|Proteobacteria,1SMVA@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Domain of unknown function (DUF4143)	-	-	-	-	-	-	-	-	-	-	-	-	AAA_14,DUF4143
MMGS2_k127_3907035_3	933262.AXAM01000012_gene1803	1.933e-19	90.0	COG1373@1|root,COG1373@2|Bacteria,1R9U4@1224|Proteobacteria	1224|Proteobacteria	S	ATPase (AAA superfamily	-	-	-	-	-	-	-	-	-	-	-	-	AAA_14,DUF4143
MMGS2_k127_3907035_5	998674.ATTE01000001_gene421	1.868e-05	49.0	COG3264@1|root,COG3264@2|Bacteria,1MWSA@1224|Proteobacteria,1RMYY@1236|Gammaproteobacteria,460MA@72273|Thiotrichales	72273|Thiotrichales	M	Mechanosensitive ion channel	-	-	-	-	-	-	-	-	-	-	-	-	MS_channel
MMGS2_k127_3935018_0	716544.wcw_1325	1.244e-87	297.0	COG0722@1|root,COG0722@2|Bacteria,2JFMF@204428|Chlamydiae	204428|Chlamydiae	E	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)	aroF	-	2.5.1.54	ko:K01626	ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024	M00022	R01826	RC00435	ko00000,ko00001,ko00002,ko01000	-	-	-	DAHP_synth_1
MMGS2_k127_3935018_2	648757.Rvan_2835	5.764e-18	85.0	COG3177@1|root,COG3177@2|Bacteria,1MV69@1224|Proteobacteria,2U0GI@28211|Alphaproteobacteria,3N87B@45401|Hyphomicrobiaceae	28211|Alphaproteobacteria	S	Fic/DOC family N-terminal	-	-	-	-	-	-	-	-	-	-	-	-	Fic,Fic_N
MMGS2_k127_3935018_1	673862.BABL1_27	2.151e-49	194.0	COG1524@1|root,COG1524@2|Bacteria,1R5V5@1224|Proteobacteria,430H4@68525|delta/epsilon subdivisions,2WVV3@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Type I phosphodiesterase / nucleotide pyrophosphatase	phoK	-	-	-	-	-	-	-	-	-	-	-	Phosphodiest
MMGS2_k127_3965503_0	331113.SNE_A03310	1.107e-153	507.0	COG0793@1|root,COG0793@2|Bacteria,2JFDY@204428|Chlamydiae	204428|Chlamydiae	M	Belongs to the peptidase S41A family	tsp	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PDZ,PDZ_2,Peptidase_S41
MMGS2_k127_3965503_1	1437425.CSEC_1995	1.222e-26	113.0	COG0582@1|root,COG0582@2|Bacteria	2|Bacteria	L	DNA integration	-	-	-	-	-	-	-	-	-	-	-	-	Phage_integrase
MMGS2_k127_3980943_2	765952.PUV_19370	5.538e-93	312.0	COG0496@1|root,COG0496@2|Bacteria,2JFU0@204428|Chlamydiae	204428|Chlamydiae	F	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates	surE	-	3.1.3.5	ko:K03787	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346	RC00017	ko00000,ko00001,ko01000	-	-	-	SurE
MMGS2_k127_3980943_0	331113.SNE_A06000	3.409e-165	532.0	COG0591@1|root,COG0591@2|Bacteria,2JFMA@204428|Chlamydiae	204428|Chlamydiae	E	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	putP	-	-	ko:K11928	-	-	-	-	ko00000,ko02000	2.A.21.2	-	-	SSF
MMGS2_k127_3980943_1	331113.SNE_A06010	1.475e-104	346.0	COG0037@1|root,COG0037@2|Bacteria,2JFSJ@204428|Chlamydiae	204428|Chlamydiae	H	Belongs to the TtcA family	ttcA	-	-	-	-	-	-	-	-	-	-	-	ATP_bind_3
MMGS2_k127_3980943_3	1121472.AQWN01000008_gene2033	1.221e-09	63.0	COG0653@1|root,COG0653@2|Bacteria,1TPEY@1239|Firmicutes,247N2@186801|Clostridia,260C9@186807|Peptococcaceae	186801|Clostridia	U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane	secA	-	-	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4	-	-	Helicase_C,SEC-C,SecA_DEAD,SecA_PP_bind,SecA_SW
MMGS2_k127_4064258_6	771875.Ferpe_1339	1.568e-14	75.0	COG0223@1|root,COG0223@2|Bacteria,2GC8D@200918|Thermotogae	200918|Thermotogae	J	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus	fmt	GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	2.1.2.9	ko:K00604	ko00670,ko00970,map00670,map00970	-	R03940	RC00026,RC00165	ko00000,ko00001,ko01000	-	-	-	Formyl_trans_C,Formyl_trans_N
MMGS2_k127_4064258_1	331113.SNE_A21390	1.282e-134	433.0	COG1043@1|root,COG1043@2|Bacteria,2JFJZ@204428|Chlamydiae	204428|Chlamydiae	M	Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	lpxA	-	2.3.1.129	ko:K00677	ko00540,ko01100,ko01503,map00540,map01100,map01503	M00060	R04567	RC00039,RC00055	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Acetyltransf_11,Hexapep
MMGS2_k127_4064258_4	331113.SNE_A21400	3.86e-64	223.0	COG0764@1|root,COG0764@2|Bacteria,2JG3H@204428|Chlamydiae	204428|Chlamydiae	I	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs	fabZ	-	4.2.1.59	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04428,R04535,R04537,R04544,R04568,R04954,R04965,R07764,R10117,R10121	RC00831,RC01095	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	FabA
MMGS2_k127_4064258_3	331113.SNE_A21410	1.66e-105	350.0	COG0774@1|root,COG0774@2|Bacteria,2JFHE@204428|Chlamydiae	204428|Chlamydiae	F	Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis	lpxC	-	3.5.1.108	ko:K02535	ko00540,ko01100,map00540,map01100	M00060	R04587	RC00166,RC00300	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	LpxC
MMGS2_k127_4064258_0	331113.SNE_A21420	5.177e-137	454.0	COG0815@1|root,COG0815@2|Bacteria,2JFX7@204428|Chlamydiae	204428|Chlamydiae	M	Transfers the fatty acyl group on membrane lipoproteins	lnt	-	-	ko:K03820	-	-	-	-	ko00000,ko01000	-	GT2	-	CN_hydrolase
MMGS2_k127_4064258_5	765952.PUV_23100	9.404e-24	106.0	COG2259@1|root,COG2259@2|Bacteria,2JGJ1@204428|Chlamydiae	204428|Chlamydiae	S	DoxX	-	-	-	ko:K15977	-	-	-	-	ko00000	-	-	-	DoxX
MMGS2_k127_4064258_2	765952.PUV_23110	3.129e-127	417.0	COG0144@1|root,COG0144@2|Bacteria,2JFP8@204428|Chlamydiae	204428|Chlamydiae	J	Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family	rsmB	-	-	-	-	-	-	-	-	-	-	-	Methyltr_RsmB-F
MMGS2_k127_4084463_2	331113.SNE_A05910	1.77e-20	96.0	COG2271@1|root,COG2271@2|Bacteria	2|Bacteria	G	transmembrane transporter activity	-	-	-	ko:K08166	-	-	-	-	ko00000,ko02000	2.A.1.3.10	-	-	MFS_1
MMGS2_k127_4084463_0	697282.Mettu_0566	1.787e-176	581.0	COG3280@1|root,COG3280@2|Bacteria,1QTVK@1224|Proteobacteria,1T1IP@1236|Gammaproteobacteria,1XDND@135618|Methylococcales	135618|Methylococcales	G	Alpha amylase, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Alpha-amylase
MMGS2_k127_4084463_1	1203611.KB894542_gene590	3.026e-100	342.0	COG1640@1|root,COG1640@2|Bacteria,4NF7Z@976|Bacteroidetes,2FMBZ@200643|Bacteroidia,22UYW@171550|Rikenellaceae	976|Bacteroidetes	G	Starch binding domain	malQ	-	2.4.1.25	ko:K00705	ko00500,ko01100,map00500,map01100	-	R05196	RC00049	ko00000,ko00001,ko01000	-	GH77	-	CBM_20,Glyco_hydro_77
MMGS2_k127_408521_2	331113.SNE_A07320	2.286e-41	163.0	COG0671@1|root,COG0671@2|Bacteria	2|Bacteria	I	phosphatidate phosphatase activity	yveB	-	2.7.4.29	ko:K19803	-	-	R11186	RC00002	ko00000,ko01000,ko01005	-	-	-	PAP2
MMGS2_k127_408521_0	331113.SNE_A07330	2.383e-64	233.0	COG0795@1|root,COG0795@2|Bacteria,2JG1G@204428|Chlamydiae	204428|Chlamydiae	S	YjgP YjgQ family	CP_0860	-	-	ko:K11720	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko02000	1.B.42.1	-	-	YjgP_YjgQ
MMGS2_k127_408521_1	331113.SNE_A07340	6.26e-60	218.0	COG0795@1|root,COG0795@2|Bacteria,2JG0P@204428|Chlamydiae	204428|Chlamydiae	S	Predicted permease YjgP/YjgQ family	-	-	-	ko:K07091	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko02000	1.B.42.1	-	-	YjgP_YjgQ
MMGS2_k127_4109378_1	331113.SNE_A04320	1.786e-70	251.0	COG0156@1|root,COG0156@2|Bacteria,2JFFU@204428|Chlamydiae	204428|Chlamydiae	H	Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA	bioF_2	-	2.3.1.47	ko:K00652	ko00780,ko01100,map00780,map01100	M00123,M00573,M00577	R03210,R10124	RC00004,RC00039,RC02725	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
MMGS2_k127_4109378_0	1444711.CCJF01000004_gene1876	8.912e-211	664.0	COG0021@1|root,COG0021@2|Bacteria,2JFFT@204428|Chlamydiae	204428|Chlamydiae	G	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate	tkt	-	2.2.1.1	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01067,R01641,R01830,R06590	RC00032,RC00226,RC00571,RC01560	ko00000,ko00001,ko00002,ko01000	-	-	-	Transket_pyr,Transketolase_C,Transketolase_N
MMGS2_k127_4133465_2	765952.PUV_11550	4.802e-42	159.0	COG2166@1|root,COG2166@2|Bacteria,2JG8A@204428|Chlamydiae	204428|Chlamydiae	S	Fe-S metabolism associated domain	sufE	-	-	ko:K02426	-	-	-	-	ko00000	-	-	-	SufE
MMGS2_k127_4133465_3	1444712.BN1013_00805	2.731e-34	132.0	COG0361@1|root,COG0361@2|Bacteria,2JG9T@204428|Chlamydiae	204428|Chlamydiae	J	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex	infA	-	-	ko:K02518	-	-	-	-	ko00000,ko03012	-	-	-	eIF-1a
MMGS2_k127_4133465_0	331113.SNE_A15190	1e-226	705.0	COG0050@1|root,COG0050@2|Bacteria,2JFRG@204428|Chlamydiae	204428|Chlamydiae	J	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis	tuf	-	-	ko:K02358	-	-	-	-	ko00000,ko03012,ko03029,ko04147	-	-	-	GTP_EFTU,GTP_EFTU_D2,GTP_EFTU_D3
MMGS2_k127_4133465_5	331113.SNE_A15180	6.782e-10	63.0	COG0690@1|root,COG0690@2|Bacteria,2JGDB@204428|Chlamydiae	204428|Chlamydiae	U	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation	secE	-	-	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2	-	-	SecE
MMGS2_k127_4133465_1	765952.PUV_19860	3.449e-77	261.0	COG0250@1|root,COG0250@2|Bacteria,2JG0K@204428|Chlamydiae	204428|Chlamydiae	K	Participates in transcription elongation, termination and antitermination	nusG	-	-	ko:K02601	-	-	-	-	ko00000,ko03009,ko03021	-	-	-	KOW,NusG
MMGS2_k127_4133465_4	1444712.BN1013_00811	4.658e-32	126.0	COG0080@1|root,COG0080@2|Bacteria,2JG1I@204428|Chlamydiae	204428|Chlamydiae	J	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors	rplK	-	-	ko:K02867	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L11,Ribosomal_L11_N
MMGS2_k127_4177198_0	331113.SNE_A18750	1.419e-106	350.0	COG0217@1|root,COG0217@2|Bacteria,2JFMK@204428|Chlamydiae	204428|Chlamydiae	K	Transcriptional Regulatory Protein	CP_0176	-	-	-	-	-	-	-	-	-	-	-	Transcrip_reg
MMGS2_k127_4177198_3	1444711.CCJF01000005_gene964	1.325e-44	168.0	COG1670@1|root,COG1670@2|Bacteria,2JGRB@204428|Chlamydiae	204428|Chlamydiae	J	FR47-like protein	-	-	-	ko:K03825	-	-	-	-	ko00000,ko01000	-	-	-	-
MMGS2_k127_4177198_2	331113.SNE_A18770	1.096e-46	173.0	COG1670@1|root,COG1670@2|Bacteria,2JHHU@204428|Chlamydiae	204428|Chlamydiae	J	Acetyltransferase (GNAT) domain	-	-	-	ko:K03825	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_1
MMGS2_k127_4177198_1	331113.SNE_A18780	1.322e-74	252.0	COG1186@1|root,COG1186@2|Bacteria,2JFVB@204428|Chlamydiae	204428|Chlamydiae	J	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA	prfB	-	-	ko:K02836	-	-	-	-	ko00000,ko03012	-	-	-	PCRF,RF-1
MMGS2_k127_4223043_0	331113.SNE_A22190	8.292e-96	324.0	COG0616@1|root,COG0616@2|Bacteria,2JFFW@204428|Chlamydiae	204428|Chlamydiae	OU	Peptidase family S49	sohB	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S49
MMGS2_k127_4223043_3	331113.SNE_A22140	3.356e-50	184.0	COG0558@1|root,COG0558@2|Bacteria,2JG6R@204428|Chlamydiae	204428|Chlamydiae	I	Belongs to the CDP-alcohol phosphatidyltransferase class-I family	pgsA_1	-	2.7.8.5	ko:K00995	ko00564,ko01100,map00564,map01100	-	R01801	RC00002,RC00017,RC02795	ko00000,ko00001,ko01000	-	-	-	CDP-OH_P_transf
MMGS2_k127_4223043_1	331113.SNE_A22130	1.628e-57	206.0	COG0586@1|root,COG0586@2|Bacteria,2JG5K@204428|Chlamydiae	204428|Chlamydiae	S	SNARE associated Golgi protein	-	-	-	-	-	-	-	-	-	-	-	-	SNARE_assoc
MMGS2_k127_4223043_2	331113.SNE_A22110	1.273e-54	197.0	COG3202@1|root,COG3202@2|Bacteria,2JFQD@204428|Chlamydiae	204428|Chlamydiae	P	ADP,ATP carrier protein	tlcA-C	-	-	ko:K03301	-	-	-	-	ko00000	2.A.12	-	-	TLC
MMGS2_k127_4225110_7	264201.pc0190	1.57e-27	112.0	COG0396@1|root,COG0396@2|Bacteria,2JFF7@204428|Chlamydiae	204428|Chlamydiae	O	ABC transporter	sufC	-	-	ko:K09013	-	-	-	-	ko00000,ko02000	-	-	-	ABC_tran
MMGS2_k127_4225110_1	1444711.CCJF01000005_gene632	8.749e-112	375.0	COG0719@1|root,COG0719@2|Bacteria,2JFQN@204428|Chlamydiae	204428|Chlamydiae	O	Uncharacterized protein family (UPF0051)	sufD	-	-	ko:K09015	-	-	-	-	ko00000	-	-	-	UPF0051
MMGS2_k127_4225110_0	1444711.CCJF01000005_gene633	4.837e-149	481.0	COG0520@1|root,COG0520@2|Bacteria,2JFTA@204428|Chlamydiae	204428|Chlamydiae	E	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine	sufS	-	2.8.1.7,4.4.1.16	ko:K11717	ko00450,ko01100,map00450,map01100	-	R03599,R11528	RC00961,RC01789,RC02313	ko00000,ko00001,ko01000	-	-	-	Aminotran_5
MMGS2_k127_4225110_4	331113.SNE_A23410	1.613e-53	204.0	COG3468@1|root,COG3468@2|Bacteria,2JHAK@204428|Chlamydiae	204428|Chlamydiae	MU	outer membrane autotransporter barrel domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_4225110_3	331113.SNE_A02880	7.043e-81	277.0	COG4791@1|root,COG4791@2|Bacteria,2JFXE@204428|Chlamydiae	204428|Chlamydiae	U	type III secretion inner membrane protein SctT	sctT	-	-	ko:K03228	ko03070,map03070	M00332,M00542,M00660	-	-	ko00000,ko00001,ko00002,ko02044	3.A.6.1,3.A.6.3	-	-	Bac_export_1
MMGS2_k127_4225110_6	331113.SNE_A02890	2.62e-31	124.0	COG4794@1|root,COG4794@2|Bacteria,2JGCB@204428|Chlamydiae	204428|Chlamydiae	U	type III secretion inner membrane protein SctS	sctS	-	-	ko:K03227	ko03070,map03070	M00332,M00542,M00660	-	-	ko00000,ko00001,ko00002,ko02044	3.A.6.1,3.A.6.3	-	-	Bac_export_3
MMGS2_k127_4225110_2	331113.SNE_A02900	1.167e-92	311.0	COG4790@1|root,COG4790@2|Bacteria,2JHI6@204428|Chlamydiae	204428|Chlamydiae	U	Type III secretion inner membrane protein SctR	sctR	-	-	ko:K03226	ko03070,map03070	M00332,M00542,M00660	-	-	ko00000,ko00001,ko00002,ko02044	3.A.6.1,3.A.6.3	-	-	FliP
MMGS2_k127_4225110_5	331113.SNE_A02910	2.827e-33	131.0	COG1317@1|root,COG1317@2|Bacteria,2JG0V@204428|Chlamydiae	204428|Chlamydiae	NU	Type III	yscL	-	-	ko:K03223	ko03070,map03070	M00332,M00660	-	-	ko00000,ko00001,ko00002,ko02044	3.A.6.1,3.A.6.3	-	-	FliH
MMGS2_k127_4250024_1	765952.PUV_15200	3.827e-46	172.0	COG0346@1|root,COG0346@2|Bacteria,2JGH2@204428|Chlamydiae	204428|Chlamydiae	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
MMGS2_k127_4250024_3	765952.PUV_15190	1.106e-34	134.0	COG1673@1|root,COG1673@2|Bacteria,2JH4W@204428|Chlamydiae	204428|Chlamydiae	S	EVE domain	-	-	-	-	-	-	-	-	-	-	-	-	EVE
MMGS2_k127_4250024_6	765952.PUV_15180	9.069e-06	47.0	COG1846@1|root,COG1846@2|Bacteria,2JH1B@204428|Chlamydiae	204428|Chlamydiae	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR
MMGS2_k127_4250024_4	765952.PUV_15180	3.882e-31	123.0	COG1846@1|root,COG1846@2|Bacteria,2JH1B@204428|Chlamydiae	204428|Chlamydiae	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR
MMGS2_k127_4250024_2	243231.GSU1367	2.067e-41	160.0	COG5340@1|root,COG5340@2|Bacteria,1RGNP@1224|Proteobacteria,42UD1@68525|delta/epsilon subdivisions,2WQPR@28221|Deltaproteobacteria	28221|Deltaproteobacteria	K	Psort location Cytoplasmic, score	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_4250024_0	243231.GSU1368	2.016e-86	294.0	COG2253@1|root,COG2253@2|Bacteria,1NHYV@1224|Proteobacteria,43ABR@68525|delta/epsilon subdivisions,2WSTM@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Nucleotidyl transferase AbiEii toxin, Type IV TA system	-	-	-	-	-	-	-	-	-	-	-	-	AbiEii
MMGS2_k127_4250024_5	331113.SNE_A07870	5.069e-06	52.0	COG0317@1|root,COG0317@2|Bacteria,2JH69@204428|Chlamydiae	204428|Chlamydiae	KT	Endonuclease/Exonuclease/phosphatase family	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_4332172_1	1444711.CCJF01000005_gene604	9.911e-120	390.0	COG0772@1|root,COG0772@2|Bacteria,2JFPV@204428|Chlamydiae	204428|Chlamydiae	D	Belongs to the SEDS family	rodA	-	-	ko:K05837	-	-	-	-	ko00000,ko03036	-	-	-	FTSW_RODA_SPOVE
MMGS2_k127_4332172_2	331113.SNE_A03180	5.897e-45	167.0	2CDQ1@1|root,32TFM@2|Bacteria,2JG96@204428|Chlamydiae	204428|Chlamydiae	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_4332172_0	697282.Mettu_3431	3.569e-126	411.0	COG2217@1|root,COG2217@2|Bacteria,1MU08@1224|Proteobacteria,1RN2C@1236|Gammaproteobacteria,1XEHC@135618|Methylococcales	135618|Methylococcales	P	haloacid dehalogenase-like hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	E1-E2_ATPase,Hydrolase
MMGS2_k127_4340692_0	331113.SNE_A04850	9.028e-188	595.0	COG0593@1|root,COG0593@2|Bacteria,2JFNG@204428|Chlamydiae	204428|Chlamydiae	L	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids	dnaA2	-	-	ko:K02313	ko02020,ko04112,map02020,map04112	-	-	-	ko00000,ko00001,ko03032,ko03036	-	-	-	Bac_DnaA,Bac_DnaA_C,DnaA_N
MMGS2_k127_4340692_1	269799.Gmet_1071	2.362e-36	140.0	COG3617@1|root,COG3617@2|Bacteria,1QX1C@1224|Proteobacteria,42R8T@68525|delta/epsilon subdivisions,2WQ1T@28221|Deltaproteobacteria	28221|Deltaproteobacteria	K	BRO family, N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Bro-N
MMGS2_k127_4349876_1	886293.Sinac_3058	8.237e-47	173.0	COG1249@1|root,COG1249@2|Bacteria,2IY39@203682|Planctomycetes	203682|Planctomycetes	C	Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase	sthA	-	1.6.1.1	ko:K00322	ko00760,ko01100,map00760,map01100	-	R00112	RC00001	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2,Pyr_redox_dim
MMGS2_k127_4349876_0	331113.SNE_A03020	0.0	1075.0	COG0058@1|root,COG0058@2|Bacteria,2JGP1@204428|Chlamydiae	204428|Chlamydiae	G	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties	glgP	-	2.4.1.1	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	-	R02111	-	ko00000,ko00001,ko01000	-	GT35	-	Phosphorylase
MMGS2_k127_4349876_2	331113.SNE_A03000	2.177e-17	85.0	COG0834@1|root,COG0834@2|Bacteria,2JG7C@204428|Chlamydiae	204428|Chlamydiae	ET	Periplasmic amino acid-binding protein	fliY	-	-	ko:K02030	-	M00236	-	-	ko00000,ko00002,ko02000	3.A.1.3	-	-	SBP_bac_3
MMGS2_k127_4365763_0	765952.PUV_25430	1.086e-130	426.0	COG0859@1|root,COG0859@2|Bacteria,2JFNJ@204428|Chlamydiae	204428|Chlamydiae	M	Glycosyltransferase family 9 (heptosyltransferase)	rfaF	-	-	ko:K02843	ko00540,ko01100,map00540,map01100	M00080	-	-	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT9	-	Glyco_transf_9
MMGS2_k127_4365763_1	331113.SNE_A02200	4.18e-99	332.0	COG0859@1|root,COG0859@2|Bacteria	2|Bacteria	M	ADP-heptose-lipopolysaccharide heptosyltransferase activity	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_9,TPR_2
MMGS2_k127_4365763_2	1437425.CSEC_1528	5.367e-57	208.0	COG4284@1|root,COG4284@2|Bacteria,2JFER@204428|Chlamydiae	204428|Chlamydiae	G	UDP-N-acetylglucosamine pyrophosphorylase	CP_1013	-	2.7.7.23,2.7.7.83	ko:K00972	ko00520,ko01100,ko01130,map00520,map01100,map01130	M00361,M00362	R00416	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	UDPGP
MMGS2_k127_4375137_1	1444711.CCJF01000005_gene1667	9.917e-60	214.0	COG2175@1|root,COG2175@2|Bacteria,2JGX4@204428|Chlamydiae	204428|Chlamydiae	Q	Taurine catabolism dioxygenase TauD, TfdA family	-	-	-	-	-	-	-	-	-	-	-	-	TauD
MMGS2_k127_4375137_0	331113.SNE_A21850	3.659e-232	741.0	COG0341@1|root,COG0342@1|root,COG0341@2|Bacteria,COG0342@2|Bacteria,2JFRC@204428|Chlamydiae	204428|Chlamydiae	U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA	secD	-	-	ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	2.A.6.4	-	-	SecD_SecF
MMGS2_k127_4390803_3	1444711.CCJF01000004_gene1839	9.997e-73	251.0	COG2265@1|root,COG2265@2|Bacteria,2JFX6@204428|Chlamydiae	204428|Chlamydiae	J	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family	rumA	-	-	-	-	-	-	-	-	-	-	-	tRNA_U5-meth_tr
MMGS2_k127_4390803_4	331113.SNE_A03870	5.802e-37	143.0	COG1862@1|root,COG1862@2|Bacteria,2JGA9@204428|Chlamydiae	204428|Chlamydiae	U	The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF- YajC-YidC subcomplex facilitates these functions	yajC	-	-	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2	-	-	YajC
MMGS2_k127_4390803_2	264201.pc1536	5.877e-77	272.0	COG1409@1|root,COG1409@2|Bacteria,2JFSW@204428|Chlamydiae	204428|Chlamydiae	S	Purple acid Phosphatase, N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos,Pur_ac_phosph_N
MMGS2_k127_4390803_0	331113.SNE_A03900	8.261e-244	766.0	COG0326@1|root,COG0326@2|Bacteria,2JFDI@204428|Chlamydiae	204428|Chlamydiae	O	chaperone protein htpG	htpG	-	-	ko:K04079	ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418	-	-	-	ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147	-	-	-	HATPase_c_3,HSP90
MMGS2_k127_4390803_1	1444711.CCJF01000004_gene1853	3.325e-155	500.0	COG0171@1|root,COG0388@1|root,COG0171@2|Bacteria,COG0388@2|Bacteria,2JFG4@204428|Chlamydiae	204428|Chlamydiae	H	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source	nadE	-	6.3.5.1	ko:K01950	ko00760,ko01100,map00760,map01100	M00115	R00257	RC00010,RC00100	ko00000,ko00001,ko00002,ko01000	-	-	-	CN_hydrolase,NAD_synthase
MMGS2_k127_4484773_1	331113.SNE_A12670	8.671e-63	222.0	COG0166@1|root,COG0166@2|Bacteria,2JFI4@204428|Chlamydiae	204428|Chlamydiae	F	glucose-6-phosphate isomerase	pgi	-	5.3.1.9	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	M00001,M00004,M00114	R02739,R02740,R03321	RC00376,RC00563	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	PGI
MMGS2_k127_4484773_2	331113.SNE_A12710	2.869e-20	100.0	2ED9E@1|root,3375V@2|Bacteria,2JGFV@204428|Chlamydiae	204428|Chlamydiae	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_4484773_0	716544.wcw_0722	3.284e-69	241.0	COG0220@1|root,COG0220@2|Bacteria,2JG2D@204428|Chlamydiae	204428|Chlamydiae	J	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA	trmB	-	2.1.1.33	ko:K03439	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Methyltransf_4
MMGS2_k127_449619_4	331113.SNE_A11320	2.488e-23	101.0	COG0721@1|root,COG0721@2|Bacteria,2JGEI@204428|Chlamydiae	204428|Chlamydiae	J	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)	gatC	-	6.3.5.6,6.3.5.7	ko:K02435	ko00970,ko01100,map00970,map01100	-	R03905,R04212	RC00010	ko00000,ko00001,ko01000,ko03029	-	-	-	Glu-tRNAGln
MMGS2_k127_449619_1	1444712.BN1013_01554	8.165e-184	587.0	COG0154@1|root,COG0154@2|Bacteria,2JFF1@204428|Chlamydiae	204428|Chlamydiae	J	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)	gatA	-	6.3.5.6,6.3.5.7	ko:K02433	ko00970,ko01100,map00970,map01100	-	R03905,R04212	RC00010	ko00000,ko00001,ko01000,ko03029	-	-	-	Amidase
MMGS2_k127_449619_0	331113.SNE_A11300	5.001e-207	655.0	COG0064@1|root,COG0064@2|Bacteria,2JFE7@204428|Chlamydiae	204428|Chlamydiae	J	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)	gatB	-	6.3.5.6,6.3.5.7	ko:K02434	ko00970,ko01100,map00970,map01100	-	R03905,R04212	RC00010	ko00000,ko00001,ko01000,ko03029	-	-	-	GatB_N,GatB_Yqey
MMGS2_k127_449619_2	331113.SNE_A11240	4.926e-88	308.0	COG1538@1|root,COG1538@2|Bacteria,2JG63@204428|Chlamydiae	204428|Chlamydiae	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
MMGS2_k127_449619_3	243231.GSU1610	1.453e-44	171.0	COG0845@1|root,COG0845@2|Bacteria,1MW65@1224|Proteobacteria,42NJG@68525|delta/epsilon subdivisions,2WJ8R@28221|Deltaproteobacteria,43US6@69541|Desulfuromonadales	28221|Deltaproteobacteria	M	Biotin-lipoyl like	-	-	-	ko:K07799	ko02020,map02020	M00648	-	-	ko00000,ko00001,ko00002,ko02000	8.A.1	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
MMGS2_k127_4509353_1	331113.SNE_A05780	2.309e-166	540.0	COG1109@1|root,COG1109@2|Bacteria,2JFUP@204428|Chlamydiae	204428|Chlamydiae	G	Phosphoglucomutase phosphomannomutase	pgcA	-	5.4.2.8	ko:K01840	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	M00114	R01818	RC00408	ko00000,ko00001,ko00002,ko01000	-	-	-	PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV
MMGS2_k127_4509353_2	716544.wcw_1412	1.391e-56	206.0	COG0300@1|root,COG0300@2|Bacteria,2JG4K@204428|Chlamydiae	204428|Chlamydiae	S	Enoyl-(Acyl carrier protein) reductase	-	-	-	ko:K07124	-	-	-	-	ko00000	-	-	-	adh_short
MMGS2_k127_4509353_0	331113.SNE_A05720	2.409e-246	778.0	COG1480@1|root,COG1480@2|Bacteria,2JFF5@204428|Chlamydiae	204428|Chlamydiae	S	Metal dependent phosphohydrolases with conserved 'HD' motif.	yqfF	-	-	ko:K07037	-	-	-	-	ko00000	-	-	-	7TM-7TMR_HD,7TMR-HDED,HD
MMGS2_k127_452370_2	690850.Desaf_2283	7.616e-35	141.0	COG4097@1|root,COG4097@2|Bacteria,1MV9P@1224|Proteobacteria,436QA@68525|delta/epsilon subdivisions,2X1CK@28221|Deltaproteobacteria,2MESE@213115|Desulfovibrionales	28221|Deltaproteobacteria	P	Ferric reductase like transmembrane component	-	-	-	-	-	-	-	-	-	-	-	-	Ferric_reduct,NAD_binding_1
MMGS2_k127_452370_0	765952.PUV_17750	5.678e-61	213.0	COG1610@1|root,COG1610@2|Bacteria,2JH0E@204428|Chlamydiae	204428|Chlamydiae	S	Yqey-like protein	-	-	-	ko:K09117	-	-	-	-	ko00000	-	-	-	YqeY
MMGS2_k127_452370_1	864069.MicloDRAFT_00056960	6.793e-47	171.0	COG1064@1|root,COG1064@2|Bacteria,1MUTT@1224|Proteobacteria,2TTYY@28211|Alphaproteobacteria,1JSZJ@119045|Methylobacteriaceae	28211|Alphaproteobacteria	S	Alcohol dehydrogenase GroES-like domain	-	-	-	ko:K13979	-	-	-	-	ko00000,ko01000	-	-	-	ADH_N,ADH_zinc_N
MMGS2_k127_4560843_2	331113.SNE_A05790	9.356e-48	174.0	COG0727@1|root,COG0727@2|Bacteria,2JG8E@204428|Chlamydiae	204428|Chlamydiae	S	Putative zinc- or iron-chelating domain	-	-	-	ko:K06940	-	-	-	-	ko00000	-	-	-	CxxCxxCC
MMGS2_k127_4560843_1	331113.SNE_A05800	4.869e-79	273.0	COG1409@1|root,COG1409@2|Bacteria,2JH5T@204428|Chlamydiae	204428|Chlamydiae	S	Calcineurin-like phosphoesterase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos
MMGS2_k127_4560843_0	331113.SNE_A05870	1.405e-212	672.0	COG0459@1|root,COG0459@2|Bacteria,2JFHN@204428|Chlamydiae	204428|Chlamydiae	O	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions	CP_0968	-	-	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	-	-	-	Cpn60_TCP1
MMGS2_k127_4593017_1	643867.Ftrac_0093	1.369e-50	188.0	COG3599@1|root,COG3599@2|Bacteria,4NQDF@976|Bacteroidetes,47QRC@768503|Cytophagia	976|Bacteroidetes	D	TIGRFAM DivIVA domain	divIVA	-	-	ko:K04074	-	-	-	-	ko00000,ko03036	-	-	-	DivIVA
MMGS2_k127_4593017_0	313606.M23134_02445	2.826e-93	312.0	COG2319@1|root,COG2319@2|Bacteria,4NH20@976|Bacteroidetes,47JUN@768503|Cytophagia	976|Bacteroidetes	S	PFAM WD domain, G-beta repeat	-	-	-	-	-	-	-	-	-	-	-	-	WD40
MMGS2_k127_4610464_4	1304885.AUEY01000093_gene1587	2.557e-16	82.0	COG2161@1|root,COG2161@2|Bacteria,1NBSZ@1224|Proteobacteria,4332I@68525|delta/epsilon subdivisions,2WXB2@28221|Deltaproteobacteria,2MPCN@213118|Desulfobacterales	28221|Deltaproteobacteria	D	Antitoxin Phd_YefM, type II toxin-antitoxin system	-	-	-	-	-	-	-	-	-	-	-	-	PhdYeFM_antitox
MMGS2_k127_4610464_2	1304885.AUEY01000093_gene1586	3.975e-34	135.0	COG1487@1|root,COG1487@2|Bacteria,1RIB5@1224|Proteobacteria,42W91@68525|delta/epsilon subdivisions,2WRAU@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	PIN domain	-	-	-	ko:K07062	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	PIN
MMGS2_k127_4610464_1	716544.wcw_0960	1.898e-39	154.0	COG2242@1|root,COG2242@2|Bacteria	2|Bacteria	H	protein methyltransferase activity	-	-	-	-	-	-	-	-	-	-	-	-	DOT1,Glycos_transf_2,Hexapep,Methyltransf_21,Methyltransf_25
MMGS2_k127_4610464_3	1121024.AUCD01000007_gene1970	1.301e-20	96.0	COG2154@1|root,COG2154@2|Bacteria,1VERE@1239|Firmicutes,4HPDC@91061|Bacilli,27HMQ@186828|Carnobacteriaceae	91061|Bacilli	H	Pterin 4 alpha carbinolamine dehydratase	phhB	-	4.2.1.96	ko:K01724	ko00790,map00790	-	R04734	RC01208	ko00000,ko00001,ko01000,ko04147	-	-	-	Pterin_4a
MMGS2_k127_4610464_0	331113.SNE_A01680	1.076e-59	212.0	COG0494@1|root,COG0494@2|Bacteria,2JH2H@204428|Chlamydiae	204428|Chlamydiae	L	nUDIX hydrolase	-	-	3.6.1.13	ko:K01515	ko00230,map00230	-	R01054	RC00002	ko00000,ko00001,ko01000	-	-	-	NUDIX
MMGS2_k127_4618618_2	331113.SNE_A17650	1.421e-175	553.0	COG4789@1|root,COG4789@2|Bacteria,2JFH4@204428|Chlamydiae	204428|Chlamydiae	U	Type III secretion inner membrane protein SctV	sctV	-	-	ko:K03230	ko03070,map03070	M00332,M00542,M00660	-	-	ko00000,ko00001,ko00002,ko02044	3.A.6.1,3.A.6.3	-	-	FHIPEP
MMGS2_k127_4618618_3	331113.SNE_A17670	1.65e-92	317.0	28N7M@1|root,2ZBCA@2|Bacteria,2JFPY@204428|Chlamydiae	204428|Chlamydiae	S	Type III secretion regulator YopN LcrE InvE MxiC	lcrE	-	-	ko:K04058	ko03070,map03070	M00332	-	-	ko00000,ko00001,ko00002,ko02044	-	-	-	HrpJ
MMGS2_k127_4618618_4	331113.SNE_A17680	6.425e-28	118.0	2EA1R@1|root,33471@2|Bacteria,2JGDJ@204428|Chlamydiae	204428|Chlamydiae	S	Tir chaperone protein (CesT) family	sycE	-	-	-	-	-	-	-	-	-	-	-	CesT
MMGS2_k127_4618618_0	331113.SNE_A17880	6.616e-177	569.0	COG1640@1|root,COG1640@2|Bacteria,2JFE9@204428|Chlamydiae	204428|Chlamydiae	G	4-alpha-glucanotransferase	malQ	-	2.4.1.25	ko:K00705	ko00500,ko01100,map00500,map01100	-	R05196	RC00049	ko00000,ko00001,ko01000	-	GH77	-	Glyco_hydro_77
MMGS2_k127_4618618_1	331113.SNE_A17720	8.737e-177	567.0	COG0457@1|root,COG2912@1|root,COG0457@2|Bacteria,COG2912@2|Bacteria,2JFGS@204428|Chlamydiae	204428|Chlamydiae	S	Transglutaminase-like superfamily	CP_0628	-	-	-	-	-	-	-	-	-	-	-	TPR_8,Transglut_core2
MMGS2_k127_4618618_6	716544.wcw_p0002	0.0003328	44.0	COG3657@1|root,COG3657@2|Bacteria	2|Bacteria	K	addiction module killer protein	-	-	-	-	-	-	-	-	-	-	-	-	Gp49
MMGS2_k127_4618618_5	716544.wcw_p0003	6.76e-20	93.0	293JK@1|root,2ZR1M@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_4624819_1	1437425.CSEC_1523	5.765e-75	257.0	COG0605@1|root,COG0605@2|Bacteria,2JG4M@204428|Chlamydiae	204428|Chlamydiae	C	Iron/manganese superoxide dismutases, C-terminal domain	chrC	-	1.15.1.1	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	-	-	-	ko00000,ko00001,ko01000	-	-	-	Sod_Fe_C
MMGS2_k127_4624819_0	1444711.CCJF01000005_gene1603	1.252e-92	313.0	COG0053@1|root,COG0053@2|Bacteria,2JGP4@204428|Chlamydiae	204428|Chlamydiae	P	Cation efflux family	-	-	-	-	-	-	-	-	-	-	-	-	Cation_efflux,ZT_dimer
MMGS2_k127_4624819_2	1437425.CSEC_0393	1.633e-21	98.0	COG1186@1|root,COG1186@2|Bacteria,2JH72@204428|Chlamydiae	204428|Chlamydiae	J	RF-1 domain	-	-	-	-	-	-	-	-	-	-	-	-	RF-1
MMGS2_k127_4639690_2	1444711.CCJF01000004_gene1966	2.519e-49	182.0	COG0030@1|root,COG0030@2|Bacteria,2JFY7@204428|Chlamydiae	204428|Chlamydiae	J	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits	ksgA	-	2.1.1.182	ko:K02528	-	-	R10716	RC00003,RC03257	ko00000,ko01000,ko03009	-	-	-	RrnaAD
MMGS2_k127_4639690_1	331113.SNE_A21500	1.732e-74	265.0	COG1686@1|root,COG1686@2|Bacteria,2JFGM@204428|Chlamydiae	204428|Chlamydiae	M	D-alanyl-D-alanine carboxypeptidase	dacC	-	3.4.16.4	ko:K07258	ko00550,ko01100,map00550,map01100	-	-	-	ko00000,ko00001,ko01000,ko01002,ko01011	-	-	-	PBP5_C,Peptidase_S11
MMGS2_k127_4639690_3	331113.SNE_A21510	2.843e-41	156.0	2E7DZ@1|root,331X1@2|Bacteria,2JGFH@204428|Chlamydiae	204428|Chlamydiae	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_4639690_5	331113.SNE_A21570	1.163e-24	108.0	COG2172@1|root,COG2172@2|Bacteria,2JGEA@204428|Chlamydiae	204428|Chlamydiae	T	Histidine kinase-like ATPase domain	rsbW	-	-	-	-	-	-	-	-	-	-	-	HATPase_c_2
MMGS2_k127_4639690_4	331113.SNE_A21580	3.706e-28	121.0	2EF13@1|root,338U8@2|Bacteria,2JGFP@204428|Chlamydiae	204428|Chlamydiae	S	Lipopolysaccharide-assembly	-	-	-	-	-	-	-	-	-	-	-	-	LptE
MMGS2_k127_4639690_0	331113.SNE_A21590	1.217e-78	271.0	COG1729@1|root,COG4105@1|root,COG1729@2|Bacteria,COG4105@2|Bacteria,2JG42@204428|Chlamydiae	204428|Chlamydiae	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_6
MMGS2_k127_4656346_0	1437425.CSEC_2263	1.029e-129	419.0	COG0024@1|root,COG0024@2|Bacteria,2JFE5@204428|Chlamydiae	204428|Chlamydiae	E	Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed	map	-	3.4.11.18	ko:K01265	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M24,SEC-C
MMGS2_k127_4656346_5	1123366.TH3_21534	4.207e-05	51.0	COG4625@1|root,COG4625@2|Bacteria	2|Bacteria	T	pathogenesis	Z012_00010	-	-	-	-	-	-	-	-	-	-	-	Autotransporter,Peptidase_S8
MMGS2_k127_4656346_1	331113.SNE_A17920	4.519e-69	241.0	COG0101@1|root,COG0101@2|Bacteria,2JG1S@204428|Chlamydiae	204428|Chlamydiae	J	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs	truA2	-	5.4.99.12	ko:K06173	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	PseudoU_synth_1
MMGS2_k127_4656346_3	331113.SNE_A17910	4.07e-50	184.0	COG2095@1|root,COG2095@2|Bacteria,2JG4G@204428|Chlamydiae	204428|Chlamydiae	U	UPF0056 inner membrane protein	-	-	-	ko:K05595	-	-	-	-	ko00000,ko02000	2.A.95.1	-	-	MarC
MMGS2_k127_4656346_2	264201.pc0688	1.138e-58	216.0	COG1502@1|root,COG1502@2|Bacteria,2JG2C@204428|Chlamydiae	204428|Chlamydiae	I	Phospholipase D family protein	CP_0428	-	-	-	-	-	-	-	-	-	-	-	PLDc_2
MMGS2_k127_4656346_4	331113.SNE_A17800	3.045e-36	139.0	COG0227@1|root,COG0227@2|Bacteria,2JGBN@204428|Chlamydiae	204428|Chlamydiae	J	Ribosomal L28 family	rpmB	-	-	ko:K02902	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L28
MMGS2_k127_4680288_3	1121451.DESAM_10269	4.364e-07	58.0	COG0406@1|root,COG0406@2|Bacteria,1RKST@1224|Proteobacteria,42XUP@68525|delta/epsilon subdivisions,2WUVF@28221|Deltaproteobacteria	28221|Deltaproteobacteria	G	Histidine phosphatase superfamily (branch 1)	-	-	-	-	-	-	-	-	-	-	-	-	His_Phos_1
MMGS2_k127_4680288_0	1158292.JPOE01000002_gene3547	8.77e-149	483.0	COG0438@1|root,COG0535@1|root,COG0438@2|Bacteria,COG0535@2|Bacteria,1NB81@1224|Proteobacteria,2VVMC@28216|Betaproteobacteria	28216|Betaproteobacteria	M	Glycosyl transferase 4-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
MMGS2_k127_4680288_1	502025.Hoch_0783	1.996e-135	439.0	COG0438@1|root,COG0535@1|root,COG0438@2|Bacteria,COG0535@2|Bacteria,1PEJK@1224|Proteobacteria,43A11@68525|delta/epsilon subdivisions,2X9V1@28221|Deltaproteobacteria,2YWWH@29|Myxococcales	28221|Deltaproteobacteria	M	Iron-sulfur cluster-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Radical_SAM,SPASM
MMGS2_k127_4680288_2	502025.Hoch_0784	5.914e-52	188.0	COG0500@1|root,COG2226@2|Bacteria,1PXEH@1224|Proteobacteria	1224|Proteobacteria	Q	WG containing repeat	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_2
MMGS2_k127_469551_1	331113.SNE_A10450	1.228e-133	445.0	COG4166@1|root,COG4166@2|Bacteria,2JFKE@204428|Chlamydiae	2|Bacteria	E	transmembrane transport	oppA	GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464	-	ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00439	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25	-	-	SBP_bac_5
MMGS2_k127_469551_4	716544.wcw_1570	1.219e-76	261.0	COG0522@1|root,COG0522@2|Bacteria,2JFKA@204428|Chlamydiae	204428|Chlamydiae	J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit	rpsD	-	-	ko:K02986	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S4,S4
MMGS2_k127_469551_2	331113.SNE_A19200	2.276e-111	368.0	COG1054@1|root,COG1054@2|Bacteria,2JFNW@204428|Chlamydiae	204428|Chlamydiae	S	Belongs to the UPF0176 family	yceA	-	-	ko:K07146	-	-	-	-	ko00000	-	-	-	Rhodanese,Rhodanese_C
MMGS2_k127_469551_6	331113.SNE_A19180	2.032e-29	126.0	COG0350@1|root,COG0350@2|Bacteria,2JH8K@204428|Chlamydiae	204428|Chlamydiae	L	6-O-methylguanine DNA methyltransferase, DNA binding domain	-	-	2.1.1.63	ko:K00567	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DNA_binding_1
MMGS2_k127_469551_3	331113.SNE_A19170	4.813e-87	298.0	COG2849@1|root,COG2849@2|Bacteria,2JG13@204428|Chlamydiae	204428|Chlamydiae	S	repeat protein	CP_0153	-	-	-	-	-	-	-	-	-	-	-	MORN_2
MMGS2_k127_469551_0	331113.SNE_A19150	2.995e-190	615.0	COG0072@1|root,COG0073@1|root,COG0072@2|Bacteria,COG0073@2|Bacteria,2JFCR@204428|Chlamydiae	204428|Chlamydiae	J	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily	pheT	-	6.1.1.20	ko:K01890	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	B3_4,B5,FDX-ACB,tRNA_bind
MMGS2_k127_469551_5	331113.SNE_A19130	1.214e-38	153.0	COG1388@1|root,COG1388@2|Bacteria,2JGB6@204428|Chlamydiae	204428|Chlamydiae	M	Lysin motif	-	-	-	-	-	-	-	-	-	-	-	-	LysM
MMGS2_k127_470304_2	297246.lpp1089	1.207e-32	133.0	COG1670@1|root,COG2320@1|root,COG1670@2|Bacteria,COG2320@2|Bacteria,1RH46@1224|Proteobacteria,1SREN@1236|Gammaproteobacteria,1JCRK@118969|Legionellales	118969|Legionellales	J	GrpB protein	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3,DUF4111,GrpB
MMGS2_k127_470304_1	187272.Mlg_0268	1.736e-37	150.0	COG2928@1|root,COG2928@2|Bacteria,1R79M@1224|Proteobacteria,1S6CC@1236|Gammaproteobacteria,1WZFF@135613|Chromatiales	135613|Chromatiales	S	Protein of unknown function (DUF502)	-	-	-	-	-	-	-	-	-	-	-	-	DUF502
MMGS2_k127_470304_3	716544.wcw_1270	9.751e-14	73.0	COG2036@1|root,33IMA@2|Bacteria,2JHG5@204428|Chlamydiae	204428|Chlamydiae	B	protein heterodimerization activity	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_470304_0	309801.trd_0582	3.82e-132	428.0	COG1064@1|root,COG1064@2|Bacteria,2G829@200795|Chloroflexi,27YST@189775|Thermomicrobia	189775|Thermomicrobia	S	Alcohol dehydrogenase GroES-like domain	-	-	1.1.1.1	ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	-	R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310	RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273	ko00000,ko00001,ko01000	-	-	-	ADH_N
MMGS2_k127_4747617_1	1283300.ATXB01000001_gene207	5.593e-07	55.0	COG3385@1|root,COG3385@2|Bacteria,1PHKQ@1224|Proteobacteria,1SIFZ@1236|Gammaproteobacteria	1224|Proteobacteria	L	DDE superfamily endonuclease	-	-	-	-	-	-	-	-	-	-	-	-	DDE_5
MMGS2_k127_4747880_2	84531.JMTZ01000023_gene4219	5.531e-51	198.0	COG1538@1|root,COG1538@2|Bacteria,1MUZZ@1224|Proteobacteria,1RQEP@1236|Gammaproteobacteria,1X3VF@135614|Xanthomonadales	135614|Xanthomonadales	M	Outer membrane efflux protein	mdtP	-	-	-	-	-	-	-	-	-	-	-	OEP
MMGS2_k127_4747880_1	331113.SNE_A10520	8.113e-106	356.0	COG1566@1|root,COG1566@2|Bacteria,2JFUF@204428|Chlamydiae	204428|Chlamydiae	V	HlyD membrane-fusion protein of T1SS	emrA	-	-	ko:K03543	-	M00701	-	-	ko00000,ko00002,ko02000	8.A.1.1	-	-	Biotin_lipoyl_2,HlyD_3
MMGS2_k127_4747880_0	1123393.KB891326_gene224	1.274e-129	430.0	COG0477@1|root,COG2814@2|Bacteria,1MU1I@1224|Proteobacteria,2VJGS@28216|Betaproteobacteria,1KRP0@119069|Hydrogenophilales	119069|Hydrogenophilales	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
MMGS2_k127_4774133_2	452652.KSE_09250	1.048e-69	246.0	COG0111@1|root,COG0111@2|Bacteria,2HD2J@201174|Actinobacteria,2M4NS@2063|Kitasatospora	201174|Actinobacteria	C	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain	-	-	1.1.1.399,1.1.1.95	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R01513	RC00031	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh,2-Hacid_dh_C
MMGS2_k127_4774133_3	1122169.AREN01000001_gene976	5.47e-52	199.0	COG0477@1|root,COG2814@2|Bacteria,1MW19@1224|Proteobacteria,1RMSZ@1236|Gammaproteobacteria,1JE3D@118969|Legionellales	118969|Legionellales	EGP	Sugar (and other) transporter	-	-	-	ko:K08154	-	-	-	-	ko00000,ko02000	2.A.1.2.9	-	-	MFS_1
MMGS2_k127_4774133_0	1444712.BN1013_01435	2.895e-209	659.0	COG0017@1|root,COG0017@2|Bacteria,2JFVT@204428|Chlamydiae	204428|Chlamydiae	J	tRNA synthetases class II (D, K and N)	asnS	-	6.1.1.22	ko:K01893	ko00970,map00970	M00359,M00360	R03648	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_2,tRNA_anti-codon
MMGS2_k127_4774133_1	331113.SNE_A19230	4.561e-78	265.0	COG0648@1|root,COG0648@2|Bacteria,2JFHU@204428|Chlamydiae	204428|Chlamydiae	L	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin	nfo	-	3.1.21.2	ko:K01151	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	AP_endonuc_2
MMGS2_k127_4791894_0	571166.KI421510_gene89	7.527e-147	478.0	COG3177@1|root,COG3177@2|Bacteria,1MXWY@1224|Proteobacteria,2U3KT@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Fic/DOC family	-	-	-	-	-	-	-	-	-	-	-	-	Fic
MMGS2_k127_4791894_1	466038.KI421440_gene1399	1.29e-13	73.0	COG2154@1|root,COG2154@2|Bacteria,1RH99@1224|Proteobacteria,2UCDA@28211|Alphaproteobacteria,4BQY8@82117|unclassified Alphaproteobacteria	28211|Alphaproteobacteria	H	Pterin 4 alpha carbinolamine dehydratase	phhB	-	4.2.1.96	ko:K01724	ko00790,map00790	-	R04734	RC01208	ko00000,ko00001,ko01000,ko04147	-	-	-	Pterin_4a
MMGS2_k127_4805195_2	331113.SNE_A15950	2.973e-40	153.0	COG0681@1|root,COG0681@2|Bacteria,2JFVN@204428|Chlamydiae	204428|Chlamydiae	U	Belongs to the peptidase S26 family	lepB	-	3.4.21.89	ko:K03100	ko02024,ko03060,map02024,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S24
MMGS2_k127_4805195_0	1444711.CCJF01000005_gene825	2.578e-107	366.0	COG0728@1|root,COG0728@2|Bacteria,2JFGY@204428|Chlamydiae	204428|Chlamydiae	S	Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane	murJ	-	-	ko:K03980	-	-	-	-	ko00000,ko01011,ko02000	2.A.66.4	-	-	MVIN
MMGS2_k127_4805195_1	331113.SNE_A10490	1.719e-77	268.0	COG4166@1|root,COG4166@2|Bacteria,2JFE2@204428|Chlamydiae	204428|Chlamydiae	E	peptide ABC transporter, periplasmic	oppA_2	-	-	ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25	-	-	SBP_bac_5
MMGS2_k127_4809028_0	153721.MYP_724	3.813e-56	207.0	COG2027@1|root,COG2027@2|Bacteria,4NGIQ@976|Bacteroidetes,47K1Y@768503|Cytophagia	976|Bacteroidetes	M	PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C	dacB	-	3.4.16.4	ko:K07259	ko00550,map00550	-	-	-	ko00000,ko00001,ko01000,ko01002,ko01011	-	-	-	Peptidase_S13
MMGS2_k127_481583_0	1437425.CSEC_2246	2.161e-150	487.0	COG0557@1|root,COG0557@2|Bacteria,2JFD4@204428|Chlamydiae	204428|Chlamydiae	J	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs	rnr	-	-	ko:K12573	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03016,ko03019	-	-	-	OB_RNB,RNB,S1
MMGS2_k127_481583_3	331113.SNE_A09320	6.665e-45	169.0	COG1011@1|root,COG1011@2|Bacteria,2JHBS@204428|Chlamydiae	204428|Chlamydiae	S	Haloacid dehalogenase-like hydrolase	-	-	3.1.3.10	ko:K07025,ko:K20866	ko00010,ko01120,map00010,map01120	-	R00947	RC00078	ko00000,ko00001,ko01000	-	-	-	HAD_2
MMGS2_k127_481583_1	331113.SNE_A09340	3.237e-111	366.0	COG0190@1|root,COG0190@2|Bacteria,2JFJ9@204428|Chlamydiae	204428|Chlamydiae	F	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate	folD	-	1.5.1.5,3.5.4.9	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	M00140,M00377	R01220,R01655	RC00202,RC00578	ko00000,ko00001,ko00002,ko01000	-	-	-	THF_DHG_CYH,THF_DHG_CYH_C
MMGS2_k127_481583_2	331113.SNE_A09350	3.889e-84	287.0	COG0483@1|root,COG0483@2|Bacteria,2JG08@204428|Chlamydiae	204428|Chlamydiae	G	Inositol monophosphatase family	suhB	-	3.1.3.25	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	M00131	R01185,R01186,R01187	RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	Inositol_P
MMGS2_k127_4894987_0	1268635.Loa_00344	7.313e-37	162.0	COG2256@1|root,COG2256@2|Bacteria,1P522@1224|Proteobacteria,1SVJ6@1236|Gammaproteobacteria,1JC4I@118969|Legionellales	2|Bacteria	L	atpase related to the helicase subunit of the holliday junction resolvase	rarA	-	-	ko:K07452,ko:K07478	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	AAA,AAA_assoc_2,MgsA_C,RuvB_N
MMGS2_k127_4967831_1	1437425.CSEC_1288	3.9e-34	136.0	COG1309@1|root,COG1309@2|Bacteria,2JFYZ@204428|Chlamydiae	204428|Chlamydiae	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
MMGS2_k127_4967831_3	477974.Daud_0399	2.621e-19	89.0	COG3039@1|root,COG3039@2|Bacteria,1TRBK@1239|Firmicutes,24DZ0@186801|Clostridia,262XU@186807|Peptococcaceae	186801|Clostridia	L	PFAM transposase, IS4 family protein	-	-	-	-	-	-	-	-	-	-	-	-	DDE_Tnp_1,DUF772
MMGS2_k127_4967831_2	331113.SNE_A09470	1.616e-19	89.0	COG0267@1|root,COG0267@2|Bacteria,2JGJK@204428|Chlamydiae	204428|Chlamydiae	J	Belongs to the bacterial ribosomal protein bL33 family	rpmG	-	-	ko:K02913	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L33
MMGS2_k127_4967831_0	331113.SNE_A09460	5.283e-96	332.0	COG4591@1|root,COG4591@2|Bacteria,2JHHC@204428|Chlamydiae	204428|Chlamydiae	M	FtsX-like permease family	-	-	-	ko:K09808	ko02010,map02010	M00255	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.125	-	-	FtsX
MMGS2_k127_4991548_2	331113.SNE_A12100	2.656e-26	112.0	COG1950@1|root,COG1950@2|Bacteria,2JGJZ@204428|Chlamydiae	204428|Chlamydiae	S	Mycobacterial 4 TMS phage holin, superfamily IV	-	-	-	ko:K08972	-	-	-	-	ko00000	-	-	-	Phage_holin_4_2
MMGS2_k127_4991548_0	768671.ThimaDRAFT_1828	7.472e-101	344.0	COG1301@1|root,COG1301@2|Bacteria,1MU0Q@1224|Proteobacteria,1RMEN@1236|Gammaproteobacteria,1WWIC@135613|Chromatiales	135613|Chromatiales	U	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family	-	-	-	-	-	-	-	-	-	-	-	-	SDF
MMGS2_k127_4991548_1	1249627.D779_2374	1.501e-35	141.0	COG1301@1|root,COG1301@2|Bacteria,1MU0Q@1224|Proteobacteria,1RMEN@1236|Gammaproteobacteria,1WWIC@135613|Chromatiales	135613|Chromatiales	U	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family	-	-	-	-	-	-	-	-	-	-	-	-	SDF
MMGS2_k127_4993129_0	331113.SNE_A18190	0.0	1111.0	COG0751@1|root,COG0752@1|root,COG0751@2|Bacteria,COG0752@2|Bacteria,2JFPU@204428|Chlamydiae	204428|Chlamydiae	J	Multifunctional fusion protein	glyQS	GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0016874,GO:0016875,GO:0046983,GO:0140098,GO:0140101	6.1.1.14	ko:K14164	ko00970,map00970	M00360	R03654	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko03016	-	-	-	DALR_1,tRNA-synt_2e,tRNA_synt_2f
MMGS2_k127_5023009_0	1437425.CSEC_2036	1.988e-230	721.0	COG2217@1|root,COG2217@2|Bacteria,2JGVR@204428|Chlamydiae	204428|Chlamydiae	P	E1-E2 ATPase	-	-	-	-	-	-	-	-	-	-	-	-	E1-E2_ATPase,Hydrolase
MMGS2_k127_5023009_1	765952.PUV_15240	8.949e-143	465.0	COG4097@1|root,COG4097@2|Bacteria,2JGUG@204428|Chlamydiae	204428|Chlamydiae	C	Ferric reductase like transmembrane component	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_8,Ferric_reduct,NAD_binding_1
MMGS2_k127_5067088_0	1408444.JHYC01000018_gene307	5.791e-139	450.0	COG0582@1|root,COG0582@2|Bacteria,1MWBN@1224|Proteobacteria,1RPD0@1236|Gammaproteobacteria,1JDMK@118969|Legionellales	118969|Legionellales	L	Phage integrase family	-	-	-	-	-	-	-	-	-	-	-	-	Phage_integrase
MMGS2_k127_5067088_1	765952.PUV_17630	4.62e-88	294.0	COG3896@1|root,COG3896@2|Bacteria,2JGFS@204428|Chlamydiae	204428|Chlamydiae	V	Chloramphenicol phosphotransferase-like protein	-	-	-	ko:K18554	-	-	-	-	br01600,ko00000,ko01000,ko01504	-	-	-	CPT
MMGS2_k127_5067088_2	765952.PUV_18030	2.628e-07	55.0	COG1961@1|root,COG1961@2|Bacteria,2JGRW@204428|Chlamydiae	204428|Chlamydiae	L	Resolvase, N terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Resolvase,Zn_ribbon_recom
MMGS2_k127_5067088_3	1121447.JONL01000001_gene735	2.465e-06	49.0	2EG8N@1|root,33A0G@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_507988_9	1444712.BN1013_00283	1.533e-10	62.0	COG1199@1|root,COG1199@2|Bacteria,2JFNF@204428|Chlamydiae	204428|Chlamydiae	L	helicase dinG	dinG	-	3.6.4.12	ko:K03722	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DEAD,DEAD_2,Helicase_C_2,ResIII
MMGS2_k127_507988_1	1033802.SSPSH_001952	9.792e-87	300.0	COG1448@1|root,COG1448@2|Bacteria,1MUT0@1224|Proteobacteria,1RN02@1236|Gammaproteobacteria	1236|Gammaproteobacteria	E	aminotransferase	aspC	-	2.6.1.1,2.6.1.57	ko:K00813,ko:K00832	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	M00024,M00025,M00034,M00040	R00355,R00694,R00734,R00896,R01731,R02433,R02619,R05052,R07396,R10845	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
MMGS2_k127_507988_2	1444711.CCJF01000005_gene489	3.254e-64	233.0	COG1792@1|root,COG1792@2|Bacteria,2JGR9@204428|Chlamydiae	204428|Chlamydiae	M	rod shape-determining protein MreC	-	-	-	-	-	-	-	-	-	-	-	-	MreC
MMGS2_k127_507988_10	1028800.RG540_PA16020	2.929e-05	49.0	COG3177@1|root,COG3177@2|Bacteria,1MX0V@1224|Proteobacteria,2U26G@28211|Alphaproteobacteria,4BDAM@82115|Rhizobiaceae	28211|Alphaproteobacteria	S	Fic/DOC family	-	-	-	-	-	-	-	-	-	-	-	-	Fic
MMGS2_k127_507988_8	1304872.JAGC01000009_gene291	1.785e-12	70.0	COG2161@1|root,COG2161@2|Bacteria,1N7B5@1224|Proteobacteria,42V0B@68525|delta/epsilon subdivisions,2WS9N@28221|Deltaproteobacteria,2MFFA@213115|Desulfovibrionales	28221|Deltaproteobacteria	D	Antitoxin Phd_YefM, type II toxin-antitoxin system	-	-	-	-	-	-	-	-	-	-	-	-	PhdYeFM_antitox
MMGS2_k127_507988_6	65093.PCC7418_3175	9.783e-20	91.0	COG2026@1|root,COG2026@2|Bacteria,1G9CX@1117|Cyanobacteria	1117|Cyanobacteria	DJ	COGs COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system	-	-	-	ko:K06218	-	-	-	-	ko00000,ko02048	-	-	-	ParE_toxin
MMGS2_k127_507988_3	1444711.CCJF01000005_gene244	9.791e-55	205.0	COG1887@1|root,COG1887@2|Bacteria,2JG2U@204428|Chlamydiae	204428|Chlamydiae	M	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase	-	-	-	-	-	-	-	-	-	-	-	-	Glyphos_transf
MMGS2_k127_507988_4	1444712.BN1013_01928	4.598e-49	194.0	COG0631@1|root,COG0631@2|Bacteria,2JH9S@204428|Chlamydiae	204428|Chlamydiae	T	Protein phosphatase 2C	-	-	3.1.3.16	ko:K17506	-	-	-	-	ko00000,ko01000,ko01009	-	-	-	PP2C
MMGS2_k127_507988_0	673862.BABL1_262	1.778e-88	307.0	COG0438@1|root,COG0438@2|Bacteria	2|Bacteria	M	transferase activity, transferring glycosyl groups	wbbI	GO:0003674,GO:0003824,GO:0008194,GO:0008378,GO:0008921,GO:0016740,GO:0016757,GO:0016758,GO:0035250	-	-	-	-	-	-	-	-	-	iAF1260.b2034,iBWG_1329.BWG_1824,iECDH10B_1368.ECDH10B_2184,iECDH1ME8569_1439.ECDH1ME8569_1971,iECSF_1327.ECSF_1923,iEcDH1_1363.EcDH1_1623,iJO1366.b2034,iY75_1357.Y75_RS10645	-
MMGS2_k127_507988_7	121759.XP_010759807.1	3.707e-14	78.0	COG3774@1|root,2SNUI@2759|Eukaryota,3A4J6@33154|Opisthokonta,3P4KE@4751|Fungi,3R2TB@4890|Ascomycota,20H9I@147545|Eurotiomycetes,3B4HZ@33183|Onygenales,3FQNT@34383|Onygenales incertae sedis	4751|Fungi	M	Glycosyltransferase sugar-binding region containing DXD motif	-	-	-	-	-	-	-	-	-	-	-	-	Gly_transf_sug
MMGS2_k127_5150621_1	1444712.BN1013_00015	8.326e-89	296.0	28M7J@1|root,2ZAKZ@2|Bacteria,2JFRK@204428|Chlamydiae	204428|Chlamydiae	S	Protein of unknown function (DUF2709)	CP_0089	-	-	-	-	-	-	-	-	-	-	-	DUF2709
MMGS2_k127_5150621_0	716544.wcw_1707	4.318e-126	412.0	COG0334@1|root,COG0334@2|Bacteria,2JFWZ@204428|Chlamydiae	204428|Chlamydiae	C	Belongs to the Glu Leu Phe Val dehydrogenases family	ldh	-	1.4.1.9	ko:K00263	ko00280,ko00290,ko01100,ko01110,ko01130,map00280,map00290,map01100,map01110,map01130	-	R01088,R01434,R02196	RC00006,RC00036	ko00000,ko00001,ko01000	-	-	-	ELFV_dehydrog,ELFV_dehydrog_N
MMGS2_k127_5158489_2	102129.Lepto7375DRAFT_6748	2.048e-13	71.0	COG2402@1|root,COG2402@2|Bacteria,1G6UZ@1117|Cyanobacteria,1HCNZ@1150|Oscillatoriales	1117|Cyanobacteria	S	nucleic acid-binding protein	-	-	-	ko:K07065	-	-	-	-	ko00000	-	-	-	PIN
MMGS2_k127_5158489_1	886293.Sinac_0388	1.746e-82	286.0	COG1621@1|root,COG1621@2|Bacteria,2IZ2Q@203682|Planctomycetes	203682|Planctomycetes	G	beta-fructofuranosidase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_5158489_0	1437425.CSEC_1399	1.056e-99	341.0	COG1680@1|root,COG1680@2|Bacteria,2JG21@204428|Chlamydiae	204428|Chlamydiae	V	Domain of unknown function (DUF3471)	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,DUF3471
MMGS2_k127_5158489_3	1041146.ATZB01000005_gene6097	4.232e-11	64.0	COG3177@1|root,COG3177@2|Bacteria,1MV69@1224|Proteobacteria,2TT3J@28211|Alphaproteobacteria,4B7UK@82115|Rhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF4172)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4172,Fic
MMGS2_k127_5159405_1	716544.wcw_0315	4.286e-80	276.0	COG0104@1|root,COG0104@2|Bacteria,2JFRZ@204428|Chlamydiae	204428|Chlamydiae	F	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP	purA	-	6.3.4.4	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	M00049	R01135	RC00458,RC00459	ko00000,ko00001,ko00002,ko01000	-	-	-	Adenylsucc_synt
MMGS2_k127_5159405_0	331113.SNE_A21760	7.586e-93	311.0	COG0020@1|root,COG0020@2|Bacteria,2JFZ2@204428|Chlamydiae	204428|Chlamydiae	H	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids	uppS	-	2.5.1.31	ko:K00806	ko00900,ko01110,map00900,map01110	-	R06447	RC00279,RC02839	ko00000,ko00001,ko01000,ko01006	-	-	-	Prenyltransf
MMGS2_k127_5159405_3	331113.SNE_A21750	6.007e-61	220.0	COG4589@1|root,COG4589@2|Bacteria,2JHI7@204428|Chlamydiae	204428|Chlamydiae	S	Cytidylyltransferase family	cdsA	-	2.7.7.41	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	M00093	R01799	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_1
MMGS2_k127_5159405_4	331113.SNE_A21740	2.564e-53	205.0	COG0283@1|root,COG0283@2|Bacteria,2JFEA@204428|Chlamydiae	204428|Chlamydiae	F	Belongs to the cytidylate kinase family. Type 1 subfamily	cmk	-	2.7.4.25	ko:K00945	ko00240,ko01100,map00240,map01100	M00052	R00158,R00512,R01665	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	Cytidylate_kin
MMGS2_k127_5159405_2	331113.SNE_A21730	4.469e-67	246.0	COG0204@1|root,COG0204@2|Bacteria,2JG8Z@204428|Chlamydiae	204428|Chlamydiae	I	Acyltransferase	plsC	-	2.3.1.51	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R02241,R09381	RC00004,RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyltransferase
MMGS2_k127_5159405_5	331113.SNE_A21710	1.195e-35	138.0	COG3118@1|root,COG3118@2|Bacteria,2JG8T@204428|Chlamydiae	204428|Chlamydiae	O	Belongs to the thioredoxin family	trxA	-	-	ko:K03671	ko04621,ko05418,map04621,map05418	-	-	-	ko00000,ko00001,ko03110	-	-	-	Thioredoxin
MMGS2_k127_5160740_0	264201.pc0257	8.866e-105	346.0	COG1121@1|root,COG1121@2|Bacteria,2JFS6@204428|Chlamydiae	204428|Chlamydiae	P	Part of an ATP-driven transport system CPn0346 CPn0347 CPn0348 CPn0349 for a metal. Probably responsible for energy coupling to the transport system	CP_0412	-	-	ko:K11710	ko02010,map02010	M00319	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.15	-	-	ABC_tran
MMGS2_k127_5160740_1	1444712.BN1013_00529	1.793e-94	316.0	COG0803@1|root,COG0803@2|Bacteria,2JFSX@204428|Chlamydiae	204428|Chlamydiae	P	Belongs to the bacterial solute-binding protein 9 family	troA	-	-	ko:K11707	ko02010,map02010	M00319	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.15	-	-	ZnuA
MMGS2_k127_51702_1	331113.SNE_A02340	6.054e-108	360.0	COG0768@1|root,COG0768@2|Bacteria,2JFNP@204428|Chlamydiae	204428|Chlamydiae	M	penicillin-binding protein	pbp2	-	-	-	-	-	-	-	-	-	-	-	PBP_dimer,Transpeptidase
MMGS2_k127_51702_0	716544.wcw_1933	4.363e-114	374.0	COG0052@1|root,COG0052@2|Bacteria,2JFQ4@204428|Chlamydiae	204428|Chlamydiae	J	Belongs to the universal ribosomal protein uS2 family	rpsB	-	-	ko:K02967	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S2
MMGS2_k127_51702_2	264201.pc0137	1.016e-102	341.0	COG0264@1|root,COG0264@2|Bacteria,2JFNI@204428|Chlamydiae	204428|Chlamydiae	J	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome	tsf	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	-	ko:K02357	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	EF_TS
MMGS2_k127_51702_3	331113.SNE_A02400	1.172e-92	309.0	COG0528@1|root,COG0528@2|Bacteria,2JG3X@204428|Chlamydiae	204428|Chlamydiae	F	Catalyzes the reversible phosphorylation of UMP to UDP	pyrH	-	2.7.4.22	ko:K09903	ko00240,ko01100,map00240,map01100	-	R00158	RC00002	ko00000,ko00001,ko01000	-	-	-	AA_kinase
MMGS2_k127_51702_4	264201.pc1876	2.462e-27	113.0	COG0233@1|root,COG0233@2|Bacteria,2JFYW@204428|Chlamydiae	204428|Chlamydiae	J	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another	frr	-	-	ko:K02838	-	-	-	-	ko00000,ko03012	-	-	-	RRF
MMGS2_k127_517093_0	909663.KI867150_gene1101	1.674e-98	327.0	COG1533@1|root,COG1533@2|Bacteria,1MW0H@1224|Proteobacteria,42T6P@68525|delta/epsilon subdivisions,2X5AV@28221|Deltaproteobacteria	28221|Deltaproteobacteria	L	radical SAM domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Radical_SAM
MMGS2_k127_5180189_3	1278073.MYSTI_00784	0.000139	54.0	COG0666@1|root,COG4282@1|root,COG0666@2|Bacteria,COG4282@2|Bacteria,1RBYV@1224|Proteobacteria,42TI1@68525|delta/epsilon subdivisions	1224|Proteobacteria	G	PFAM Ankyrin	-	-	-	-	-	-	-	-	-	-	-	-	Ank,Ank_2,Ank_3,Ank_4,Ank_5
MMGS2_k127_5180189_2	1235792.C808_04432	8.652e-10	61.0	COG5433@1|root,COG5433@2|Bacteria	2|Bacteria	L	transposase activity	ydcC	-	-	-	-	-	-	-	-	-	-	-	DDE_Tnp_1,DDE_Tnp_1_assoc
MMGS2_k127_5180189_1	331113.SNE_A00980	1.01e-29	133.0	28KZP@1|root,2ZAEV@2|Bacteria,2JFFR@204428|Chlamydiae	204428|Chlamydiae	-	-	CP_1057	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_5180189_0	331113.SNE_A00990	2.765e-83	287.0	COG1450@1|root,COG1450@2|Bacteria,2JFRY@204428|Chlamydiae	204428|Chlamydiae	NU	general secretion pathway protein D	gspD	-	-	ko:K02453	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	Secretin,Secretin_N
MMGS2_k127_5195882_2	1444711.CCJF01000005_gene1155	7.547e-05	49.0	COG1605@1|root,COG1605@2|Bacteria	2|Bacteria	E	Chorismate mutase	aroQ	GO:0003674,GO:0003824,GO:0004106,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005623,GO:0006082,GO:0006520,GO:0006558,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016053,GO:0016853,GO:0016866,GO:0017144,GO:0019438,GO:0019752,GO:0042597,GO:0042802,GO:0042803,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046417,GO:0046983,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223	4.2.1.51,5.4.99.5	ko:K04093,ko:K04518	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00024,M00025	R00691,R01373,R01715	RC00360,RC03116	ko00000,ko00001,ko00002,ko01000	-	-	-	CM_2
MMGS2_k127_5195882_1	331113.SNE_A02780	1.995e-35	150.0	COG3468@1|root,COG3468@2|Bacteria	2|Bacteria	MU	cell adhesion	-	-	-	ko:K02024	-	-	-	-	ko00000,ko02000	1.B.3.1.1	-	-	Autotransporter,NIDO,OMP_b-brl,VPEP
MMGS2_k127_5195882_0	331113.SNE_A11980	3.808e-119	397.0	COG0169@1|root,COG0710@1|root,COG0169@2|Bacteria,COG0710@2|Bacteria,2JFIF@204428|Chlamydiae	204428|Chlamydiae	E	Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)	aroE	GO:0000166,GO:0003674,GO:0003824,GO:0003855,GO:0004764,GO:0005488,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615	1.1.1.25,4.2.1.10	ko:K13832	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R02413,R03084	RC00206,RC00848	ko00000,ko00001,ko00002,ko01000	-	-	-	DHquinase_I,Shikimate_DH,Shikimate_dh_N
MMGS2_k127_5200335_0	1230343.CANP01000027_gene1994	6.911e-25	108.0	COG2062@1|root,COG2062@2|Bacteria,1RGWQ@1224|Proteobacteria,1S9W7@1236|Gammaproteobacteria,1JEYS@118969|Legionellales	118969|Legionellales	T	Histidine phosphatase superfamily (branch 1)	sixA	-	-	ko:K08296	-	-	-	-	ko00000,ko01000	-	-	-	His_Phos_1
MMGS2_k127_5200335_1	331113.SNE_A07690	5.563e-06	50.0	COG0507@1|root,COG0507@2|Bacteria,2JFJU@204428|Chlamydiae	204428|Chlamydiae	L	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity	-	-	3.1.11.5	ko:K03581	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	AAA_30,HHH_4,HHH_5,UvrD_C_2
MMGS2_k127_5212179_0	765952.PUV_02930	0.0	1234.0	COG1197@1|root,COG1197@2|Bacteria,2JFGI@204428|Chlamydiae	204428|Chlamydiae	L	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site	mfd	-	-	ko:K03723	ko03420,map03420	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	CarD_CdnL_TRCF,DEAD,Helicase_C,TRCF
MMGS2_k127_5212179_1	716544.wcw_0234	2.599e-126	417.0	COG0013@1|root,COG0013@2|Bacteria,2JFU9@204428|Chlamydiae	204428|Chlamydiae	J	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain	alaS	-	6.1.1.7	ko:K01872	ko00970,map00970	M00359,M00360	R03038	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DHHA1,tRNA-synt_2c,tRNA_SAD
MMGS2_k127_5225843_0	765952.PUV_17070	9.178e-173	552.0	COG1875@1|root,COG1875@2|Bacteria,2JFG7@204428|Chlamydiae	204428|Chlamydiae	T	phosphate starvation-inducible protein PhoH	phoH	-	-	ko:K07175	-	-	-	-	ko00000	-	-	-	PIN_4,PhoH
MMGS2_k127_5225843_1	331113.SNE_A23390	9.409e-26	118.0	COG3468@1|root,COG3468@2|Bacteria	2|Bacteria	MU	cell adhesion	-	-	-	ko:K02024	-	-	-	-	ko00000,ko02000	1.B.3.1.1	-	-	Autotransporter,NIDO,OMP_b-brl,VPEP
MMGS2_k127_5246998_0	1444712.BN1013_00189	1.802e-271	850.0	COG1452@1|root,COG1452@2|Bacteria,2JGPM@204428|Chlamydiae	204428|Chlamydiae	M	Glycosyl hydrolase family 63 C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_63
MMGS2_k127_5246998_1	903818.KI912268_gene660	5.198e-22	100.0	COG0329@1|root,COG0329@2|Bacteria,3Y3V8@57723|Acidobacteria	57723|Acidobacteria	E	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)	dapA	-	4.3.3.7	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R10147	RC03062,RC03063	ko00000,ko00001,ko00002,ko01000	-	-	-	DHDPS
MMGS2_k127_5257183_7	331113.SNE_A07570	6.565e-14	72.0	COG0541@1|root,COG0541@2|Bacteria,2JFVZ@204428|Chlamydiae	204428|Chlamydiae	U	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY	ffh	-	3.6.5.4	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko01000,ko02044	3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9	-	-	SRP54,SRP54_N,SRP_SPB
MMGS2_k127_5257183_2	1437425.CSEC_2296	8.511e-75	261.0	COG2890@1|root,COG2890@2|Bacteria,2JFZB@204428|Chlamydiae	204428|Chlamydiae	J	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif	hemK	-	2.1.1.297	ko:K02493	-	-	R10806	RC00003,RC03279	ko00000,ko01000,ko03012	-	-	-	MTS
MMGS2_k127_5257183_1	1444711.CCJF01000005_gene1772	1.04e-149	481.0	COG0216@1|root,COG0216@2|Bacteria,2JFRI@204428|Chlamydiae	204428|Chlamydiae	J	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA	prfA	-	-	ko:K02835	-	-	-	-	ko00000,ko03012	-	-	-	PCRF,RF-1
MMGS2_k127_5257183_5	765952.PUV_18830	6.095e-36	139.0	COG0254@1|root,COG0254@2|Bacteria,2JG9J@204428|Chlamydiae	204428|Chlamydiae	J	Ribosomal protein L31	rpmE2	-	-	ko:K02909	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L31
MMGS2_k127_5257183_8	1437425.CSEC_0506	1.542e-13	72.0	COG0590@1|root,COG0590@2|Bacteria,2JGFE@204428|Chlamydiae	204428|Chlamydiae	FJ	tRNA wobble adenosine to inosine editing	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_5257183_3	765952.PUV_10480	2.063e-54	194.0	COG0590@1|root,COG0590@2|Bacteria,2JFZJ@204428|Chlamydiae	204428|Chlamydiae	FJ	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)	tadA	-	3.5.4.33	ko:K11991	-	-	R10223	RC00477	ko00000,ko01000,ko03016	-	-	-	MafB19-deam
MMGS2_k127_5257183_4	331113.SNE_A07500	3.731e-44	161.0	COG0184@1|root,COG0184@2|Bacteria,2JG4W@204428|Chlamydiae	204428|Chlamydiae	J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA	rpsO	-	-	ko:K02956	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S15
MMGS2_k127_5257183_0	1444711.CCJF01000005_gene1781	1.008e-278	875.0	COG1185@1|root,COG1185@2|Bacteria,2JFFK@204428|Chlamydiae	204428|Chlamydiae	J	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction	pnp	-	2.7.7.8	ko:K00962	ko00230,ko00240,ko03018,map00230,map00240,map03018	M00394	R00437,R00438,R00439,R00440	RC02795	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	-	-	-	KH_1,PNPase,RNase_PH,RNase_PH_C,S1
MMGS2_k127_5257183_6	429009.Adeg_1465	1.076e-31	131.0	COG0406@1|root,COG0406@2|Bacteria,1V6ES@1239|Firmicutes,24JDV@186801|Clostridia,42G0T@68295|Thermoanaerobacterales	186801|Clostridia	G	PFAM Phosphoglycerate mutase	pspA	-	3.1.3.3,3.1.3.73	ko:K02226,ko:K22305	ko00260,ko00680,ko00860,ko01100,ko01120,ko01130,map00260,map00680,map00860,map01100,map01120,map01130	M00122	R00582,R04594,R11173	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	His_Phos_1
MMGS2_k127_5298086_1	1444712.BN1013_01187	2.579e-127	416.0	COG1198@1|root,COG1198@2|Bacteria,2JFSI@204428|Chlamydiae	204428|Chlamydiae	L	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA	priA	-	-	ko:K04066	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Helicase_C,ResIII
MMGS2_k127_5298086_2	48698.ENSPFOP00000010294	1.26e-22	105.0	2DAPC@1|root,2S5G9@2759|Eukaryota,3A0GW@33154|Opisthokonta,3BHKC@33208|Metazoa,3CZTQ@33213|Bilateria,48ANH@7711|Chordata,490XV@7742|Vertebrata,4A2X5@7898|Actinopterygii	33208|Metazoa	S	Thiamine triphosphatase	THTPA	GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0017144,GO:0019637,GO:0034641,GO:0042357,GO:0042723,GO:0043167,GO:0043169,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050333,GO:0051186,GO:0071704,GO:0072527,GO:1901360,GO:1901564	3.6.1.28	ko:K05307	ko00730,ko01100,map00730,map01100	-	R00618	RC00002	ko00000,ko00001,ko01000	-	-	-	CYTH
MMGS2_k127_5298086_0	331113.SNE_A16900	2.753e-317	987.0	COG1190@1|root,COG3382@1|root,COG1190@2|Bacteria,COG3382@2|Bacteria,2JFIC@204428|Chlamydiae	204428|Chlamydiae	J	Belongs to the class-II aminoacyl-tRNA synthetase family	lysS	-	6.1.1.6	ko:K04567	ko00970,map00970	M00359,M00360	R03658	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_2,tRNA_anti-codon
MMGS2_k127_5343174_1	331113.SNE_A00450	2.912e-150	497.0	COG1196@1|root,COG1196@2|Bacteria,2JFIZ@204428|Chlamydiae	204428|Chlamydiae	D	nuclear chromosome segregation	CP_1081	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_5343174_0	1408444.JHYC01000037_gene1886	3.31e-246	779.0	COG0441@1|root,COG0441@2|Bacteria,1MUP2@1224|Proteobacteria,1RMYE@1236|Gammaproteobacteria,1JCZI@118969|Legionellales	1236|Gammaproteobacteria	J	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)	thrS	-	6.1.1.3	ko:K01868	ko00970,map00970	M00359,M00360	R03663	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,TGS,tRNA-synt_2b,tRNA_SAD
MMGS2_k127_5343174_2	1444711.CCJF01000005_gene398	1.035e-25	106.0	COG1192@1|root,COG1192@2|Bacteria,2JFK5@204428|Chlamydiae	204428|Chlamydiae	D	Cellulose biosynthesis protein BcsQ	minD	-	-	ko:K03496	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	AAA_31
MMGS2_k127_5355573_0	716544.wcw_1432	2.28e-49	185.0	COG1968@1|root,COG1968@2|Bacteria,2JG7Z@204428|Chlamydiae	204428|Chlamydiae	V	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin	uppP	-	3.6.1.27	ko:K06153	ko00550,map00550	-	R05627	RC00002	ko00000,ko00001,ko01000,ko01011	-	-	-	BacA
MMGS2_k127_5355573_1	331113.SNE_A05570	9.812e-46	173.0	COG1674@1|root,COG1674@2|Bacteria,2JFN4@204428|Chlamydiae	204428|Chlamydiae	D	Essential cell division protein that coordinates cell division and chromosome segregation. The N-terminus is involved in assembly of the cell-division machinery. The C-terminus functions as a DNA motor that moves dsDNA in an ATP-dependent manner towards the dif recombination site, which is located within the replication terminus region. Required for activation of the Xer recombinase, allowing activation of chromosome unlinking by recombination (By similarity)	ftsK	-	-	ko:K03466	-	-	-	-	ko00000,ko03036	3.A.12	-	-	FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma
MMGS2_k127_5371426_2	331113.SNE_A17870	2.185e-41	154.0	COG1452@1|root,COG1452@2|Bacteria,2JGPM@204428|Chlamydiae	2|Bacteria	M	Glycosyl hydrolase family 63 C-terminal domain	-	-	-	ko:K22110	-	-	-	-	ko00000,ko02000	1.B.35.1,1.B.35.2	-	-	Glyco_hydro_63
MMGS2_k127_5371426_1	331113.SNE_A00740	1.245e-109	364.0	COG0837@1|root,COG0837@2|Bacteria,2JH4J@204428|Chlamydiae	204428|Chlamydiae	H	Glucokinase	glk	-	2.7.1.2	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R00299,R01600,R01786	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	Glucokinase
MMGS2_k127_5371426_0	765952.PUV_00070	1.108e-165	527.0	COG0468@1|root,COG0468@2|Bacteria,2JFVU@204428|Chlamydiae	204428|Chlamydiae	L	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage	recA	-	-	ko:K03553	ko03440,map03440	M00729	-	-	ko00000,ko00001,ko00002,ko03400	-	-	-	RecA
MMGS2_k127_5371426_3	1444711.CCJF01000005_gene441	8.403e-40	151.0	COG0142@1|root,COG0142@2|Bacteria,2JFYA@204428|Chlamydiae	204428|Chlamydiae	H	Belongs to the FPP GGPP synthase family	ispA	-	2.5.1.1,2.5.1.10,2.5.1.29	ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00364,M00366	R01658,R02003,R02061	RC00279	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	polyprenyl_synt
MMGS2_k127_5386234_2	1009370.ALO_01579	1.329e-07	65.0	COG0666@1|root,COG0666@2|Bacteria,1V7AY@1239|Firmicutes,4H628@909932|Negativicutes	909932|Negativicutes	S	Ankyrin repeats (3 copies)	-	-	-	-	-	-	-	-	-	-	-	-	Ank_2,Ank_4
MMGS2_k127_5386234_3	1279017.AQYJ01000026_gene22	0.0002065	44.0	2DU2E@1|root,33NN7@2|Bacteria,1P5P1@1224|Proteobacteria,1SV3F@1236|Gammaproteobacteria	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_5386234_0	331113.SNE_A19420	4.305e-295	929.0	2CCDD@1|root,2Z99Z@2|Bacteria,2JFXI@204428|Chlamydiae	204428|Chlamydiae	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_5386234_1	639282.DEFDS_0394	4.403e-17	81.0	COG1373@1|root,COG1373@2|Bacteria	2|Bacteria	V	ATPase (AAA superfamily	-	-	-	ko:K07133	-	-	-	-	ko00000	-	-	-	AAA_14
MMGS2_k127_5388940_4	400682.PAC_15722598	7.403e-05	48.0	COG0666@1|root,KOG4177@2759|Eukaryota	2759|Eukaryota	I	spectrin binding	-	-	-	-	-	-	-	-	-	-	-	-	Ank,Ank_2,Ank_3,Ank_4,DUF3447,DUF676,F-box-like
MMGS2_k127_5388940_1	716544.wcw_0294	1.77e-131	430.0	28N6X@1|root,2ZBBQ@2|Bacteria,2JFR2@204428|Chlamydiae	204428|Chlamydiae	S	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
MMGS2_k127_5388940_0	331113.SNE_A02070	0.0	1329.0	COG0653@1|root,COG0653@2|Bacteria,2JFI8@204428|Chlamydiae	204428|Chlamydiae	U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane	secA	-	-	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4	-	-	Helicase_C,SEC-C,SecA_DEAD,SecA_PP_bind,SecA_SW
MMGS2_k127_5388940_2	1444711.CCJF01000005_gene324	4.794e-93	314.0	COG0688@1|root,COG0688@2|Bacteria,2JFMN@204428|Chlamydiae	204428|Chlamydiae	I	Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)	psd	-	4.1.1.65	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	M00093	R02055	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	PS_Dcarbxylase
MMGS2_k127_5388940_3	1444711.CCJF01000005_gene326	2.935e-88	296.0	COG0177@1|root,COG0177@2|Bacteria,2JFYD@204428|Chlamydiae	204428|Chlamydiae	L	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate	nth	-	4.2.99.18	ko:K10773	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	HhH-GPD
MMGS2_k127_5411181_1	866536.Belba_1233	4.375e-93	309.0	COG0228@1|root,COG0228@2|Bacteria,4NNY8@976|Bacteroidetes,47PR5@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the bacterial ribosomal protein bS16 family	rpsP	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02959	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	-	-	-	Ribosomal_S16
MMGS2_k127_5411181_0	1189612.A33Q_2243	1.664e-94	312.0	COG0806@1|root,COG0806@2|Bacteria,4NQF0@976|Bacteroidetes,47QUB@768503|Cytophagia	976|Bacteroidetes	J	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes	rimM	-	-	ko:K02860	-	-	-	-	ko00000,ko03009	-	-	-	PRC,RimM
MMGS2_k127_5411181_2	1120965.AUBV01000008_gene2097	7.365e-56	196.0	COG0336@1|root,COG0336@2|Bacteria,4NF2Q@976|Bacteroidetes,47MGG@768503|Cytophagia	976|Bacteroidetes	J	Belongs to the RNA methyltransferase TrmD family	trmD	GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.1.1.228	ko:K00554	-	-	R00597	RC00003,RC00334	ko00000,ko01000,ko03016	-	-	-	tRNA_m1G_MT
MMGS2_k127_542082_2	1122983.BAJY01000005_gene604	1.272e-92	318.0	COG0381@1|root,COG0381@2|Bacteria,4NGBD@976|Bacteroidetes,2FM5D@200643|Bacteroidia	976|Bacteroidetes	M	UDP-N-acetylglucosamine 2-epimerase	epsC	-	5.1.3.14	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	M00362	R00420	RC00290	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Epimerase_2
MMGS2_k127_542082_0	635013.TherJR_0957	1.388e-188	602.0	COG0463@1|root,COG1216@1|root,COG0463@2|Bacteria,COG1216@2|Bacteria,1TQEM@1239|Firmicutes,25F59@186801|Clostridia,267C7@186807|Peptococcaceae	186801|Clostridia	M	PFAM Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_4,Glycos_transf_2
MMGS2_k127_542082_3	765952.PUV_20010	1.865e-30	131.0	COG0671@1|root,COG0671@2|Bacteria,2JHAV@204428|Chlamydiae	204428|Chlamydiae	I	Acid phosphatase homologues	-	-	-	-	-	-	-	-	-	-	-	-	PAP2
MMGS2_k127_542082_1	765952.PUV_03240	2.361e-101	337.0	COG2081@1|root,COG2081@2|Bacteria,2JFEJ@204428|Chlamydiae	204428|Chlamydiae	S	HI0933-like protein	-	-	-	ko:K07007	-	-	-	-	ko00000	-	-	-	HI0933_like
MMGS2_k127_5446735_3	331113.SNE_A08960	5.335e-58	209.0	COG1452@1|root,COG1452@2|Bacteria,2JFGN@204428|Chlamydiae	204428|Chlamydiae	M	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane	CP_0756	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_5446735_4	765952.PUV_12790	7.529e-42	159.0	COG0242@1|root,COG0242@2|Bacteria,2JG53@204428|Chlamydiae	204428|Chlamydiae	J	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions	def	-	3.5.1.88	ko:K01462	-	-	-	-	ko00000,ko01000	-	-	-	Pep_deformylase
MMGS2_k127_5446735_5	331113.SNE_A08920	2.072e-26	111.0	COG1314@1|root,COG1314@2|Bacteria,2JGDG@204428|Chlamydiae	204428|Chlamydiae	U	Preprotein translocase SecG subunit	secG	-	-	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2	-	-	SecG
MMGS2_k127_5446735_2	667014.Thein_1412	3.397e-79	271.0	COG0149@1|root,COG0149@2|Bacteria,2GGX1@200940|Thermodesulfobacteria	200940|Thermodesulfobacteria	G	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)	tpiA	-	5.3.1.1	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003	R01015	RC00423	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	TIM
MMGS2_k127_5446735_1	765952.PUV_10110	1.214e-129	427.0	COG1570@1|root,COG1570@2|Bacteria,2JFHH@204428|Chlamydiae	204428|Chlamydiae	L	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides	xseA	-	3.1.11.6	ko:K03601	ko03430,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exonuc_VII_L,tRNA_anti_2
MMGS2_k127_5446735_6	1444711.CCJF01000005_gene1380	3.262e-16	81.0	COG1722@1|root,COG1722@2|Bacteria,2JGDI@204428|Chlamydiae	204428|Chlamydiae	L	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides	xseB	-	3.1.11.6	ko:K03602	ko03430,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exonuc_VII_S
MMGS2_k127_5446735_0	331113.SNE_A08880	1.071e-130	425.0	COG1154@1|root,COG1154@2|Bacteria,2JFSC@204428|Chlamydiae	204428|Chlamydiae	F	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)	dxs	-	2.2.1.7	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	M00096	R05636	RC00032	ko00000,ko00001,ko00002,ko01000	-	-	-	DXP_synthase_N,Transket_pyr,Transketolase_C
MMGS2_k127_5492664_1	331113.SNE_A05560	1.048e-54	196.0	COG0745@1|root,COG1235@1|root,COG0745@2|Bacteria,COG1235@2|Bacteria	2|Bacteria	P	May be involved in the transport of PQQ or its precursor to the periplasm	elaC	-	3.1.26.11	ko:K00784	ko03013,map03013	-	-	-	ko00000,ko00001,ko01000,ko03016	-	-	-	Lactamase_B_2
MMGS2_k127_5492664_0	1444711.CCJF01000004_gene2053	3.567e-104	344.0	COG1235@1|root,COG1235@2|Bacteria,2JFDF@204428|Chlamydiae	204428|Chlamydiae	S	Metallo-beta-lactamase superfamily	yycJ	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_2
MMGS2_k127_5492664_2	227941.CCA_00324	1.438e-35	138.0	COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,2JFWU@204428|Chlamydiae	204428|Chlamydiae	C	2-oxoisovalerate dehydrogenase, e1 component, alpha and beta subunit	CP_0743	-	1.2.4.4	ko:K00167,ko:K11381	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	M00036	R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997	RC00027,RC00627,RC02743,RC02883,RC02949,RC02953	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	E1_dh,Transket_pyr,Transketolase_C
MMGS2_k127_5506334_1	1237149.C900_02130	1.377e-21	96.0	COG3670@1|root,COG3670@2|Bacteria,4NSB3@976|Bacteroidetes,47REW@768503|Cytophagia	976|Bacteroidetes	Q	Retinal pigment epithelial membrane protein	-	-	-	-	-	-	-	-	-	-	-	-	RPE65
MMGS2_k127_5506334_2	1437425.CSEC_0280	9.89e-19	89.0	COG3237@1|root,COG3237@2|Bacteria,2JHAX@204428|Chlamydiae	204428|Chlamydiae	S	CsbD-like	-	-	-	-	-	-	-	-	-	-	-	-	CsbD
MMGS2_k127_5506334_0	673862.BABL1_346	4.98e-71	257.0	COG1115@1|root,COG1115@2|Bacteria,1MUI3@1224|Proteobacteria,42MG1@68525|delta/epsilon subdivisions,2WKHE@28221|Deltaproteobacteria	28221|Deltaproteobacteria	E	PFAM sodium alanine symporter	-	-	-	ko:K03310	-	-	-	-	ko00000	2.A.25	-	-	Na_Ala_symp
MMGS2_k127_5514342_2	1183438.GKIL_3469	2.336e-47	175.0	COG1216@1|root,COG1216@2|Bacteria,1G2HS@1117|Cyanobacteria	1117|Cyanobacteria	M	Glycosyl transferase, family 2	-	-	-	ko:K20444	-	-	-	-	ko00000,ko01000,ko01005,ko02000	4.D.1.3	GT2,GT4	-	Glyco_trans_1_4,Glycos_transf_2,TPR_1,TPR_11,TPR_16,TPR_2,TPR_8
MMGS2_k127_5514342_3	55529.EKX41933	1.909e-24	110.0	COG0790@1|root,KOG1550@2759|Eukaryota	55529.EKX41933|-	T	ERAD pathway	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_5514342_1	331113.SNE_A01980	2.376e-129	420.0	COG0320@1|root,COG0320@2|Bacteria,2JFWH@204428|Chlamydiae	204428|Chlamydiae	H	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives	lipA	-	2.8.1.8	ko:K03644	ko00785,ko01100,map00785,map01100	-	R07767,R07768	RC01978	ko00000,ko00001,ko01000	-	-	-	LIAS_N,Radical_SAM
MMGS2_k127_5514342_0	331113.SNE_A01990	4.758e-205	646.0	COG1249@1|root,COG1249@2|Bacteria,2JFIX@204428|Chlamydiae	204428|Chlamydiae	C	The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of 3 enzymatic components branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity)	lpdA	-	1.8.1.4	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00036,M00307,M00532	R00209,R01221,R01698,R03815,R07618,R08549	RC00004,RC00022,RC00583,RC02742,RC02833,RC02834	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pyr_redox_2,Pyr_redox_dim
MMGS2_k127_5514342_4	331113.SNE_A02000	1.173e-21	101.0	2E888@1|root,332MB@2|Bacteria,2JGF8@204428|Chlamydiae	204428|Chlamydiae	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_5514342_5	112098.XP_008609195.1	0.0004119	48.0	COG0666@1|root,KOG4177@2759|Eukaryota	2759|Eukaryota	I	spectrin binding	ANKLE1	GO:0000003,GO:0000018,GO:0000019,GO:0000280,GO:0002682,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003824,GO:0004518,GO:0004519,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005637,GO:0005639,GO:0005737,GO:0006139,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0006997,GO:0006998,GO:0007049,GO:0007059,GO:0007127,GO:0008104,GO:0008150,GO:0008152,GO:0009892,GO:0009987,GO:0010256,GO:0010605,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016787,GO:0016788,GO:0019219,GO:0019222,GO:0019866,GO:0022402,GO:0022414,GO:0031090,GO:0031224,GO:0031229,GO:0031300,GO:0031301,GO:0031323,GO:0031324,GO:0031490,GO:0031965,GO:0031967,GO:0031975,GO:0033036,GO:0034397,GO:0034398,GO:0034613,GO:0034641,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044446,GO:0044453,GO:0044464,GO:0044821,GO:0045132,GO:0045141,GO:0045143,GO:0045184,GO:0045595,GO:0045910,GO:0045934,GO:0045950,GO:0046483,GO:0046907,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050000,GO:0050789,GO:0050793,GO:0050794,GO:0051052,GO:0051053,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051239,GO:0051276,GO:0051303,GO:0051321,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0060255,GO:0061024,GO:0061982,GO:0065007,GO:0070192,GO:0070197,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090220,GO:0090304,GO:0090305,GO:0097159,GO:0097240,GO:0098813,GO:0140013,GO:1901360,GO:1901363,GO:1901532,GO:1903046,GO:1903706,GO:1905453,GO:1905456,GO:2000026,GO:2001020,GO:2001022	2.7.11.1	ko:K08843,ko:K21411	-	-	-	-	ko00000,ko01000,ko01001,ko03400	-	-	-	Ank_2,Ank_3,Ank_4,CorA,Ion_trans,LEM,PARP,Pkinase
MMGS2_k127_5515697_1	331113.SNE_A08770	3.001e-91	305.0	COG1624@1|root,COG1624@2|Bacteria,2JFE0@204428|Chlamydiae	204428|Chlamydiae	S	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria	dacA	-	-	-	-	-	-	-	-	-	-	-	DisA_N
MMGS2_k127_5515697_4	331113.SNE_A14040	4.744e-77	262.0	COG0847@1|root,COG0847@2|Bacteria,2JG5Z@204428|Chlamydiae	204428|Chlamydiae	L	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease	-	-	2.7.7.7	ko:K02342,ko:K13288	ko00230,ko00240,ko01100,ko03008,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03008,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03009,ko03019,ko03032,ko03400	-	-	-	RNase_T
MMGS2_k127_5515697_5	1437882.AZRU01000010_gene541	5.153e-42	159.0	COG0783@1|root,COG0783@2|Bacteria,1RAC5@1224|Proteobacteria,1S2H7@1236|Gammaproteobacteria,1YDZD@136841|Pseudomonas aeruginosa group	1236|Gammaproteobacteria	P	Belongs to the Dps family	dps	-	-	ko:K04047	-	-	-	-	ko00000,ko03036	-	-	-	Ferritin
MMGS2_k127_5515697_6	716544.wcw_0794	1.859e-27	117.0	COG0781@1|root,COG0781@2|Bacteria,2JGAM@204428|Chlamydiae	204428|Chlamydiae	K	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons	nusB	-	-	ko:K03625	-	-	-	-	ko00000,ko03009,ko03021	-	-	-	NusB
MMGS2_k127_5515697_0	331113.SNE_A13990	9.273e-96	324.0	COG0812@1|root,COG0812@2|Bacteria,2JFHG@204428|Chlamydiae	204428|Chlamydiae	M	Cell wall formation	murB	-	1.3.1.98	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	-	R03191,R03192	RC02639	ko00000,ko00001,ko01000,ko01011	-	-	-	FAD_binding_4,MurB_C
MMGS2_k127_5515697_2	331113.SNE_A13980	2.847e-83	284.0	COG0613@1|root,COG0613@2|Bacteria,2JFUH@204428|Chlamydiae	204428|Chlamydiae	S	DNA polymerase alpha chain like domain	-	-	3.1.3.97	ko:K07053	-	-	R00188,R11188	RC00078	ko00000,ko01000	-	-	-	PHP
MMGS2_k127_5515697_3	1444711.CCJF01000004_gene2347	5.381e-80	279.0	COG0285@1|root,COG0285@2|Bacteria,2JFSY@204428|Chlamydiae	204428|Chlamydiae	H	Mur ligase middle domain	folC	-	6.3.2.12,6.3.2.17	ko:K11754	ko00790,ko01100,map00790,map01100	M00126,M00841	R00942,R02237,R04241	RC00064,RC00090,RC00162	ko00000,ko00001,ko00002,ko01000	-	-	-	Mur_ligase_C,Mur_ligase_M
MMGS2_k127_5518609_0	331113.SNE_A19580	0.0	1034.0	COG0553@1|root,COG4715@1|root,COG0553@2|Bacteria,COG4715@2|Bacteria,2JFDP@204428|Chlamydiae	204428|Chlamydiae	KL	SNF2 family	CP_1020	-	-	-	-	-	-	-	-	-	-	-	Helicase_C,SNF2_N,SNF2_assoc,SWIM
MMGS2_k127_5518609_2	331113.SNE_A19590	1.921e-104	357.0	COG0544@1|root,COG0544@2|Bacteria,2JG2G@204428|Chlamydiae	204428|Chlamydiae	D	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase	tig	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	-	ko:K03545	-	-	-	-	ko00000	-	-	-	Trigger_C,Trigger_N
MMGS2_k127_5518609_3	227941.CCA_00920	2.789e-86	289.0	COG0740@1|root,COG0740@2|Bacteria,2JFNY@204428|Chlamydiae	204428|Chlamydiae	O	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins	clpP2	-	3.4.21.92	ko:K01358	ko04112,ko04212,map04112,map04212	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	CLP_protease
MMGS2_k127_5518609_1	331113.SNE_A19610	5.332e-160	508.0	COG1219@1|root,COG1219@2|Bacteria,2JFSH@204428|Chlamydiae	204428|Chlamydiae	O	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP	clpX	-	-	ko:K03544	ko04112,map04112	-	-	-	ko00000,ko00001,ko03110	-	-	-	AAA_2,ClpB_D2-small,zf-C4_ClpX
MMGS2_k127_5541496_1	1437425.CSEC_0786	9.956e-130	423.0	COG1760@1|root,COG1760@2|Bacteria,2JFH3@204428|Chlamydiae	204428|Chlamydiae	E	Serine dehydratase beta chain	sdaA	-	4.3.1.17	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230	-	R00220,R00590	RC00331,RC02600	ko00000,ko00001,ko01000	-	-	-	SDH_alpha,SDH_beta
MMGS2_k127_5541496_0	1444711.CCJF01000005_gene1405	4.376e-249	780.0	COG0504@1|root,COG0504@2|Bacteria,2JFCN@204428|Chlamydiae	204428|Chlamydiae	F	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates	pyrG	-	6.3.4.2	ko:K01937	ko00240,ko01100,map00240,map01100	M00052	R00571,R00573	RC00010,RC00074	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_synth_N,GATase
MMGS2_k127_5541496_2	331113.SNE_A09560	9.571e-32	129.0	COG0816@1|root,COG0816@2|Bacteria,2JGC0@204428|Chlamydiae	204428|Chlamydiae	J	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA	-	-	-	ko:K07447	-	-	-	-	ko00000,ko01000	-	-	-	RuvX
MMGS2_k127_5541496_3	331113.SNE_A09530	1.119e-27	113.0	COG0364@1|root,COG0364@2|Bacteria,2JFEN@204428|Chlamydiae	204428|Chlamydiae	G	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone	zwf	-	1.1.1.363,1.1.1.49	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	M00004,M00006,M00008	R00835,R02736,R10907	RC00001,RC00066	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	G6PD_C,G6PD_N
MMGS2_k127_5548875_3	331113.SNE_A06490	7.663e-74	256.0	COG0531@1|root,COG0531@2|Bacteria,2JFMI@204428|Chlamydiae	204428|Chlamydiae	E	Solute carrier family 12	-	-	-	-	-	-	-	-	-	-	-	-	AA_permease,SLC12
MMGS2_k127_5548875_2	1444712.BN1013_01051	4.142e-86	287.0	COG1678@1|root,COG1678@2|Bacteria,2JFR0@204428|Chlamydiae	204428|Chlamydiae	K	Belongs to the UPF0301 (AlgH) family	yqgE	-	-	ko:K07735	-	-	-	-	ko00000,ko03000	-	-	-	DUF179
MMGS2_k127_5548875_0	331113.SNE_A10800	1.283e-119	394.0	COG1463@1|root,COG1463@2|Bacteria,2JFN3@204428|Chlamydiae	204428|Chlamydiae	Q	MlaD protein	-	-	-	ko:K02067	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaD
MMGS2_k127_5548875_1	331113.SNE_A10810	5.211e-106	349.0	COG1127@1|root,COG1127@2|Bacteria,2JFQY@204428|Chlamydiae	204428|Chlamydiae	Q	ABC transporter	mkl	-	-	ko:K02065	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	ABC_tran
MMGS2_k127_5554943_0	716544.wcw_1585	2.033e-52	192.0	COG1544@1|root,COG1544@2|Bacteria,2JFY2@204428|Chlamydiae	204428|Chlamydiae	J	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase	hpf	-	-	ko:K05808	-	-	-	-	ko00000,ko03009	-	-	-	Ribosom_S30AE_C,Ribosomal_S30AE
MMGS2_k127_5554943_2	765952.PUV_16860	3.266e-31	128.0	COG4748@1|root,COG4748@2|Bacteria	2|Bacteria	NT	type I restriction enzyme	-	-	-	ko:K07504	-	-	-	-	ko00000	-	-	-	HSDR_N,HSDR_N_2
MMGS2_k127_5554943_1	716544.wcw_1580	4.525e-48	190.0	COG2604@1|root,COG2604@2|Bacteria,2JFK8@204428|Chlamydiae	204428|Chlamydiae	S	Protein of unknown function DUF115	-	-	-	-	-	-	-	-	-	-	-	-	MAF_flag10
MMGS2_k127_5554943_3	765952.PUV_16760	4.739e-25	109.0	COG2849@1|root,COG2849@2|Bacteria,2JGES@204428|Chlamydiae	204428|Chlamydiae	S	MORN repeat variant	-	-	-	-	-	-	-	-	-	-	-	-	MORN_2
MMGS2_k127_5571002_4	264201.pc0519	9.607e-06	47.0	COG0110@1|root,COG0110@2|Bacteria,2JGJT@204428|Chlamydiae	204428|Chlamydiae	S	Bacterial transferase hexapeptide (six repeats)	vat	-	-	ko:K18234	-	-	-	-	ko00000,ko01000,ko01504	-	-	-	Hexapep
MMGS2_k127_5571002_2	77635.BISU_1262	2.59e-07	55.0	COG2173@1|root,COG2173@2|Bacteria,2HZRJ@201174|Actinobacteria	201174|Actinobacteria	M	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide	-	-	3.4.13.22	ko:K08641	ko01502,ko02020,map01502,map02020	M00651	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	-	-	-	Peptidase_M15
MMGS2_k127_5571002_3	47716.JOFH01000063_gene6137	3.151e-06	52.0	COG0237@1|root,COG2173@1|root,COG0237@2|Bacteria,COG2173@2|Bacteria,2HZRJ@201174|Actinobacteria	201174|Actinobacteria	M	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide	-	-	3.4.13.22	ko:K08641	ko01502,ko02020,map01502,map02020	M00651	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	-	-	-	Peptidase_M15
MMGS2_k127_5571002_0	765952.PUV_20810	3.639e-151	490.0	COG0591@1|root,COG0591@2|Bacteria,2JGMB@204428|Chlamydiae	204428|Chlamydiae	E	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	CP_0268	-	-	ko:K03307	-	-	-	-	ko00000	2.A.21	-	-	SSF
MMGS2_k127_5571002_1	1444712.BN1013_00770	5.21e-61	213.0	COG1794@1|root,COG1794@2|Bacteria,2JH00@204428|Chlamydiae	204428|Chlamydiae	M	Asp/Glu/Hydantoin racemase	-	-	-	-	-	-	-	-	-	-	-	-	Asp_Glu_race
MMGS2_k127_5588739_1	331113.SNE_A12300	1.94e-30	121.0	COG0516@1|root,COG0516@2|Bacteria,2JGRE@204428|Chlamydiae	204428|Chlamydiae	C	IMP dehydrogenase / GMP reductase domain	guaB	-	1.1.1.205	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	M00050	R01130,R08240	RC00143,RC02207	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	IMPDH
MMGS2_k127_5588739_0	716544.wcw_0042	1.323e-87	295.0	COG0463@1|root,COG0463@2|Bacteria,2JFTY@204428|Chlamydiae	204428|Chlamydiae	M	Glycosyl transferase family 2	waaE	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
MMGS2_k127_5597550_1	331113.SNE_A18460	1.625e-60	218.0	COG1506@1|root,COG1506@2|Bacteria,2JHHT@204428|Chlamydiae	204428|Chlamydiae	E	peptidase	-	-	-	ko:K06889	-	-	-	-	ko00000	-	-	-	-
MMGS2_k127_5597550_0	331113.SNE_A18470	3.484e-96	329.0	COG0763@1|root,COG0763@2|Bacteria,2JFD2@204428|Chlamydiae	204428|Chlamydiae	M	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	lpxB	-	2.4.1.182	ko:K00748	ko00540,ko01100,map00540,map01100	M00060	R04606	RC00005,RC00059	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT19	-	LAB_N,LpxB
MMGS2_k127_5597550_2	1444711.CCJF01000005_gene980	2.141e-31	128.0	COG1399@1|root,COG1399@2|Bacteria,2JGBM@204428|Chlamydiae	204428|Chlamydiae	S	metal-binding, possibly nucleic acid-binding protein	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_5597550_4	264201.pc1315	8.062e-14	73.0	COG0333@1|root,COG0333@2|Bacteria,2JGJS@204428|Chlamydiae	204428|Chlamydiae	J	Belongs to the bacterial ribosomal protein bL32 family	rpmF	-	-	ko:K02911	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	-	-	-	Ribosomal_L32p
MMGS2_k127_5597550_3	608506.COB47_1379	2.269e-20	95.0	COG0416@1|root,COG0416@2|Bacteria,1TPXS@1239|Firmicutes,247KW@186801|Clostridia,42F74@68295|Thermoanaerobacterales	186801|Clostridia	I	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA	plsX	-	2.3.1.15	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R00851,R09380	RC00004,RC00039,RC00041	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	FA_synthesis
MMGS2_k127_5647864_1	765952.PUV_23400	2.28e-05	50.0	COG3209@1|root,COG3209@2|Bacteria,2JFH5@204428|Chlamydiae	204428|Chlamydiae	M	Rhs family	rhs1	-	-	-	-	-	-	-	-	-	-	-	DUF687,RHS_repeat
MMGS2_k127_5647864_0	765952.PUV_23400	7.49e-58	220.0	COG3209@1|root,COG3209@2|Bacteria,2JFH5@204428|Chlamydiae	204428|Chlamydiae	M	Rhs family	rhs1	-	-	-	-	-	-	-	-	-	-	-	DUF687,RHS_repeat
MMGS2_k127_5662184_0	765952.PUV_25740	3.386e-218	686.0	COG0305@1|root,COG0305@2|Bacteria,2JFQP@204428|Chlamydiae	204428|Chlamydiae	L	Participates in initiation and elongation during chromosome replication	dnaB	-	3.6.4.12	ko:K02314	ko03030,ko04112,map03030,map04112	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	DnaB,DnaB_C
MMGS2_k127_5662184_1	264201.pc1151	3.888e-48	184.0	29XK7@1|root,30JBA@2|Bacteria,2JG3A@204428|Chlamydiae	204428|Chlamydiae	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_5684822_2	1095747.HMPREF1049_1782	9.454e-07	51.0	COG0771@1|root,COG0771@2|Bacteria,378DR@32066|Fusobacteria	32066|Fusobacteria	D	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)	murD	-	6.3.2.9	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	-	R02783	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase_C,Mur_ligase_M
MMGS2_k127_5684822_0	331113.SNE_A17290	3.906e-174	554.0	COG0472@1|root,COG0472@2|Bacteria,2JFHV@204428|Chlamydiae	204428|Chlamydiae	M	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan	mraY	-	2.7.8.13	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	-	R05629,R05630	RC00002,RC02753	ko00000,ko00001,ko01000,ko01011	9.B.146	-	-	Glycos_transf_4,MraY_sig1
MMGS2_k127_5684822_1	331113.SNE_A17300	1.489e-96	331.0	COG0770@1|root,COG0770@2|Bacteria,2JFWE@204428|Chlamydiae	204428|Chlamydiae	M	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein	murF	-	6.3.2.10	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	-	R04573,R04617	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
MMGS2_k127_624199_0	744872.Spica_0535	6.475e-111	367.0	COG1088@1|root,COG1088@2|Bacteria,2J5ND@203691|Spirochaetes	203691|Spirochaetes	M	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily	rfbB	-	4.2.1.46	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	M00793	R06513	RC00402	ko00000,ko00001,ko00002,ko01000	-	-	-	GDP_Man_Dehyd
MMGS2_k127_624199_1	331113.SNE_A02600	7.152e-71	248.0	COG1212@1|root,COG1212@2|Bacteria,2JFZ3@204428|Chlamydiae	204428|Chlamydiae	F	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria	kdsB	-	2.7.7.38	ko:K00979	ko00540,ko01100,map00540,map01100	M00063	R03351,R11396	RC00152,RC00910	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	CTP_transf_3
MMGS2_k127_624199_2	765952.PUV_01720	5.437e-62	241.0	COG3209@1|root,COG3209@2|Bacteria,2JFH5@204428|Chlamydiae	204428|Chlamydiae	M	Rhs family	rhs1	-	-	-	-	-	-	-	-	-	-	-	DUF687,RHS_repeat
MMGS2_k127_647967_0	1444711.CCJF01000005_gene385	8.784e-75	273.0	COG1074@1|root,COG1074@2|Bacteria,2JFIP@204428|Chlamydiae	204428|Chlamydiae	L	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA	recB	-	3.1.11.5	ko:K03582	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	PDDEXK_1,UvrD-helicase,UvrD_C
MMGS2_k127_647967_1	1444711.CCJF01000005_gene386	1.721e-50	196.0	COG1330@1|root,COG1330@2|Bacteria,2JFNT@204428|Chlamydiae	204428|Chlamydiae	L	Exodeoxyribonuclease V, gamma subunit	recC	-	3.1.11.5	ko:K03583	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exonuc_V_gamma
MMGS2_k127_66518_3	331113.SNE_A07240	4.179e-36	139.0	COG0621@1|root,COG0621@2|Bacteria,2JFWW@204428|Chlamydiae	204428|Chlamydiae	J	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine	miaB	-	2.8.4.3	ko:K06168	-	-	R10645,R10646,R10647	RC00003,RC00980,RC03221,RC03222	ko00000,ko01000,ko03016	-	-	-	Radical_SAM,TRAM,UPF0004
MMGS2_k127_66518_0	331113.SNE_A07200	2.62e-245	774.0	COG0272@1|root,COG0272@2|Bacteria,2JFKS@204428|Chlamydiae	204428|Chlamydiae	L	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA	ligA	-	6.5.1.2	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	-	R00382	RC00005	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	BRCT,DNA_ligase_OB,DNA_ligase_ZBD,DNA_ligase_aden,HHH_2,HHH_5
MMGS2_k127_66518_2	264201.pc1762	3.494e-41	164.0	2C1EI@1|root,31PGH@2|Bacteria,2JG5Y@204428|Chlamydiae	204428|Chlamydiae	-	-	CP_0278	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_66518_1	1444711.CCJF01000005_gene1288	5.816e-173	552.0	COG0621@1|root,COG0621@2|Bacteria,2JFUS@204428|Chlamydiae	204428|Chlamydiae	J	Catalyzes the methylthiolation of N6- threonylcarbamoyladenosine (t(6)A), leading to the formation of 2- methylthio-N6-threonylcarbamoyladenosine (ms(2)t(6)A) at position 37 in tRNAs that read codons beginning with adenine	mtaB	-	2.8.4.5	ko:K18707	-	-	R10649	RC00003,RC03221	ko00000,ko01000,ko03016	-	-	-	Radical_SAM,UPF0004
MMGS2_k127_667062_3	1173021.ALWA01000035_gene3699	5.383e-27	127.0	COG2319@1|root,COG3903@1|root,COG2319@2|Bacteria,COG3903@2|Bacteria,1FZVW@1117|Cyanobacteria	1117|Cyanobacteria	A	WD domain, G-beta repeat	-	-	-	-	-	-	-	-	-	-	-	-	NB-ARC,WD40
MMGS2_k127_667062_0	331113.SNE_A02300	1.436e-116	383.0	COG0451@1|root,COG0451@2|Bacteria,2JFQM@204428|Chlamydiae	204428|Chlamydiae	M	Polysaccharide biosynthesis protein	gAE4	-	5.1.3.6	ko:K08679	ko00520,ko01100,map00520,map01100	-	R01385	RC00289	ko00000,ko00001,ko01000	-	-	-	Epimerase,GDP_Man_Dehyd
MMGS2_k127_667062_1	331113.SNE_A07820	1.372e-103	349.0	COG3475@1|root,COG3475@2|Bacteria,2JGSS@204428|Chlamydiae	204428|Chlamydiae	M	LicD family	-	-	-	-	-	-	-	-	-	-	-	-	LicD
MMGS2_k127_667062_2	331113.SNE_A11780	9.381e-40	155.0	2AUKY@1|root,31K9Q@2|Bacteria	2|Bacteria	S	Lipid A 3-O-deacylase (PagL)	-	-	-	-	-	-	-	-	-	-	-	-	PagL
MMGS2_k127_667062_4	5722.XP_001303225.1	5.465e-07	61.0	COG0666@1|root,KOG0504@2759|Eukaryota	2759|Eukaryota	I	protein ubiquitination	-	-	-	ko:K15502,ko:K15503	-	-	-	-	ko00000,ko01009,ko03400	-	-	-	Ank,Ank_2,Ank_3,Ank_4,Ank_5,DUF3447
MMGS2_k127_682620_0	1444711.CCJF01000005_gene901	8.358e-86	293.0	COG3108@1|root,COG3108@2|Bacteria,2JG29@204428|Chlamydiae	204428|Chlamydiae	S	Peptidase M15	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M15_3
MMGS2_k127_715222_0	1444711.CCJF01000005_gene1825	7.863e-105	347.0	COG0500@1|root,COG1215@1|root,COG0500@2|Bacteria,COG1215@2|Bacteria,2JGWA@204428|Chlamydiae	204428|Chlamydiae	M	Anp1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_4
MMGS2_k127_715222_1	1444711.CCJF01000005_gene943	1.029e-70	252.0	COG1078@1|root,COG1078@2|Bacteria	2|Bacteria	S	dGTPase activity	-	-	-	ko:K06885	-	-	-	-	ko00000	-	-	-	HD
MMGS2_k127_733492_3	1444711.CCJF01000004_gene2166	7.996e-37	142.0	COG0132@1|root,COG0132@2|Bacteria	2|Bacteria	H	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring	bioD	GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.1.1.197,6.3.3.3	ko:K01935,ko:K02169	ko00780,ko01100,map00780,map01100	M00123,M00572,M00573,M00577	R03182,R09543	RC00003,RC00460,RC00868	ko00000,ko00001,ko00002,ko01000	-	-	-	AAA_26
MMGS2_k127_733492_2	1444711.CCJF01000004_gene2165	3.566e-121	399.0	COG0156@1|root,COG0156@2|Bacteria	2|Bacteria	E	8-amino-7-oxononanoate synthase activity	bioF	-	2.3.1.47	ko:K00652	ko00780,ko01100,map00780,map01100	M00123,M00573,M00577	R03210,R10124	RC00004,RC00039,RC02725	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	iSB619.SA_RS12695	Aminotran_1_2
MMGS2_k127_733492_0	1437425.CSEC_2050	2.931e-147	471.0	COG0502@1|root,COG0502@2|Bacteria,2JGM4@204428|Chlamydiae	204428|Chlamydiae	H	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism	bioB	-	2.8.1.6	ko:K01012	ko00780,ko01100,map00780,map01100	M00123,M00573,M00577	R01078	RC00441	ko00000,ko00001,ko00002,ko01000	-	-	-	BATS,Radical_SAM
MMGS2_k127_733492_1	1444712.BN1013_00762	1.821e-127	412.0	COG1777@1|root,COG1777@2|Bacteria,2JG25@204428|Chlamydiae	204428|Chlamydiae	K	ROK family	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_738993_0	1304874.JAFY01000005_gene1554	5.705e-52	191.0	COG5421@1|root,COG5421@2|Bacteria,3TAD9@508458|Synergistetes	508458|Synergistetes	L	Transposase DDE domain	-	-	-	-	-	-	-	-	-	-	-	-	DDE_Tnp_1
MMGS2_k127_773839_0	716544.wcw_0863	2.664e-97	335.0	COG4166@1|root,COG4166@2|Bacteria,2JFKE@204428|Chlamydiae	204428|Chlamydiae	E	transmembrane transport	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_773839_1	264201.pc0765	3.391e-80	274.0	COG0527@1|root,COG0527@2|Bacteria,2JFUC@204428|Chlamydiae	204428|Chlamydiae	E	Amino acid kinase family	lysC	-	2.7.2.4	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R00480	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase
MMGS2_k127_818982_1	985867.AEWF01000006_gene578	7.421e-87	293.0	COG0477@1|root,COG2814@2|Bacteria,1MW19@1224|Proteobacteria,2TRQD@28211|Alphaproteobacteria,47F3X@766|Rickettsiales	766|Rickettsiales	EGP	Major Facilitator Superfamily	-	-	-	ko:K07552	-	-	-	-	ko00000,ko02000	2.A.1.2	-	-	MFS_1
MMGS2_k127_818982_2	381764.Fnod_0495	2.009e-85	308.0	COG0514@1|root,COG0514@2|Bacteria,2GDD1@200918|Thermotogae	200918|Thermotogae	L	TIGRFAM ATP-dependent DNA helicase, RecQ family	-	-	3.6.4.12	ko:K03654	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,Helicase_C,Pribosyltran
MMGS2_k127_818982_3	244581.IM40_08400	9.68e-80	284.0	2AKN5@1|root,31BEM@2|Bacteria,1Q79A@1224|Proteobacteria,2VDDX@28211|Alphaproteobacteria,47G2N@766|Rickettsiales	766|Rickettsiales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_818982_5	331113.SNE_A07870	3.344e-07	55.0	COG0317@1|root,COG0317@2|Bacteria,2JH69@204428|Chlamydiae	204428|Chlamydiae	KT	Endonuclease/Exonuclease/phosphatase family	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_818982_6	331113.SNE_A07870	2.041e-06	51.0	COG0317@1|root,COG0317@2|Bacteria,2JH69@204428|Chlamydiae	204428|Chlamydiae	KT	Endonuclease/Exonuclease/phosphatase family	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_818982_0	1437425.CSEC_1646	1.951e-143	466.0	COG0477@1|root,COG2814@2|Bacteria,2JG4R@204428|Chlamydiae	204428|Chlamydiae	EGP	Sugar (and other) transporter	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
MMGS2_k127_818982_4	1353529.M899_2142	1.211e-55	205.0	COG3091@1|root,COG3091@2|Bacteria,1R1VA@1224|Proteobacteria,43DBF@68525|delta/epsilon subdivisions,2X8HF@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	SprT-like family	-	-	-	-	-	-	-	-	-	-	-	-	DUF2786,SprT-like
MMGS2_k127_825411_1	243161.TC_0114	7.166e-28	113.0	2AU0F@1|root,31JKB@2|Bacteria	2|Bacteria	S	COG NOG14600 non supervised orthologous group	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_825411_2	441769.ABFU01000136_gene3470	0.0003688	44.0	29XEQ@1|root,30J4Y@2|Bacteria,1U437@1239|Firmicutes,4IDV7@91061|Bacilli,1ZJYP@1386|Bacillus	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MMGS2_k127_825411_0	765952.PUV_21400	7.272e-82	289.0	COG1073@1|root,COG1073@2|Bacteria	2|Bacteria	S	thiolester hydrolase activity	-	-	-	ko:K06889	-	-	-	-	ko00000	-	-	-	BAAT_C,Bile_Hydr_Trans
MMGS2_k127_870815_0	331113.SNE_A22060	9.79e-100	331.0	28M7J@1|root,2ZAKZ@2|Bacteria,2JFRK@204428|Chlamydiae	204428|Chlamydiae	S	Protein of unknown function (DUF2709)	CP_0089	-	-	-	-	-	-	-	-	-	-	-	DUF2709
MMGS2_k127_870815_2	765952.PUV_27610	9.213e-30	123.0	COG0802@1|root,COG0802@2|Bacteria,2JG7U@204428|Chlamydiae	204428|Chlamydiae	S	Threonylcarbamoyl adenosine biosynthesis protein TsaE	tsaE	-	-	ko:K06925	-	-	-	-	ko00000,ko03016	-	-	-	TsaE
MMGS2_k127_870815_1	1437425.CSEC_1963	9.121e-52	189.0	COG0218@1|root,COG0218@2|Bacteria,2JG1C@204428|Chlamydiae	204428|Chlamydiae	D	Necessary for normal cell division and for the maintenance of normal septation	engB	-	-	ko:K03978	-	-	-	-	ko00000,ko03036	-	-	-	MMR_HSR1
MMGS2_k127_91058_2	1444711.CCJF01000004_gene2060	4.15e-11	64.0	COG1925@1|root,COG1925@2|Bacteria,2JG8W@204428|Chlamydiae	204428|Chlamydiae	G	PTS HPr component phosphorylation site	-	-	-	ko:K11189	-	-	-	-	ko00000,ko02000	4.A.2.1	-	-	PTS-HPr
MMGS2_k127_91058_1	1437425.CSEC_0703	3.974e-122	399.0	COG1493@1|root,COG1493@2|Bacteria,2JFSZ@204428|Chlamydiae	204428|Chlamydiae	H	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr)	hprK	-	-	ko:K06023	-	-	-	-	ko00000,ko01000	-	-	-	Hpr_kinase_C,Hpr_kinase_N
MMGS2_k127_91058_0	331113.SNE_A05620	7.588e-191	603.0	COG1252@1|root,COG1252@2|Bacteria,2JFCT@204428|Chlamydiae	204428|Chlamydiae	C	Pyridine nucleotide-disulphide oxidoreductase	ndh	-	1.6.99.3	ko:K03885	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2
MMGS2_k127_981373_0	331113.SNE_A23130	2.684e-100	334.0	COG0782@1|root,COG1747@1|root,COG0782@2|Bacteria,COG1747@2|Bacteria,2JFR7@204428|Chlamydiae	204428|Chlamydiae	K	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides	greA	-	-	-	-	-	-	-	-	-	-	-	GreA_GreB,GreA_GreB_N
MMGS2_k127_981373_1	331113.SNE_A23140	2.227e-72	249.0	COG0127@1|root,COG0127@2|Bacteria,2JG0G@204428|Chlamydiae	204428|Chlamydiae	F	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions	yggV	-	3.6.1.66	ko:K02428	ko00230,map00230	-	R00426,R00720,R01855,R02100,R02720,R03531	RC00002	ko00000,ko00001,ko01000	-	-	-	Ham1p_like
MMGS2_k127_981373_3	765952.PUV_08240	6.464e-06	51.0	COG1254@1|root,COG1254@2|Bacteria,2JGGR@204428|Chlamydiae	204428|Chlamydiae	C	Acylphosphatase	-	-	3.6.1.7	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	-	R00317,R01421,R01515	RC00043	ko00000,ko00001,ko01000	-	-	-	Acylphosphatase
MMGS2_k127_981373_2	716544.wcw_1972	2.515e-49	180.0	COG0042@1|root,COG0042@2|Bacteria,2JFI0@204428|Chlamydiae	204428|Chlamydiae	H	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines	dusB	-	-	ko:K05540	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Dus
MMGS2_k127_990772_0	331113.SNE_A01700	1.374e-87	307.0	COG0323@1|root,COG0323@2|Bacteria,2JFM7@204428|Chlamydiae	204428|Chlamydiae	L	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex	mutL	-	-	ko:K03572	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	DNA_mis_repair,HATPase_c_3,MutL_C
MMGS2_k127_990772_1	264201.pc1880	3.91e-65	234.0	COG0006@1|root,COG0006@2|Bacteria,2JFYS@204428|Chlamydiae	204428|Chlamydiae	E	Creatinase/Prolidase N-terminal domain	pepP	-	3.4.11.9	ko:K01262	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Creatinase_N,Peptidase_M24
## 832 queries scanned
## Total time (seconds): 102.89810991287231
## Rate: 8.09 q/s