## Mon Mar 17 05:22:06 2025 ## emapper-2.1.9 ## /home/zhangkaihang/.conda/envs/eggnog-mapper/bin/emapper.py -i /home/zhangkaihang/metadata_analysis/metawrap/paddysoil/4paddy/bin4gtdbtk/QTD1_bin.12.fa -m mmseqs --itype genome -o QTD1_bin.12 --output_dir /home/zhangkaihang/metadata_analysis/eggnog-mapper/paddysoil/4paddy/QTD1_bin.12 --cpu 8 ## #query seed_ortholog evalue score eggNOG_OGs max_annot_lvl COG_category Description Preferred_name GOs EC KEGG_ko KEGG_Pathway KEGG_Module KEGG_Reaction KEGG_rclass BRITE KEGG_TC CAZy BiGG_Reaction PFAMs QTD1_k127_1000007_5 443143.GM18_0267 2.828e-71 248.0 COG1801@1|root,COG1801@2|Bacteria,1MU7F@1224|Proteobacteria 1224|Proteobacteria S Protein of unknown function DUF72 - - - - - - - - - - - - DUF72 QTD1_k127_1000007_4 748247.AZKH_2966 1.572e-75 263.0 COG0457@1|root,COG0789@1|root,COG0457@2|Bacteria,COG0789@2|Bacteria,1N4HS@1224|Proteobacteria,2VMAM@28216|Betaproteobacteria 28216|Betaproteobacteria K Tetratricopeptide repeat - - - - - - - - - - - - TPR_16,TPR_17,TPR_7,TPR_8 QTD1_k127_1000007_1 748247.AZKH_2967 2.514e-109 361.0 COG1273@1|root,COG1273@2|Bacteria,1N4UX@1224|Proteobacteria,2W9RN@28216|Betaproteobacteria,2KZER@206389|Rhodocyclales 206389|Rhodocyclales L With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD ku - - ko:K10979 ko03450,map03450 - - - ko00000,ko00001,ko03400 - - - Ku QTD1_k127_1000007_0 1123073.KB899242_gene946 0.0 1084.0 COG1793@1|root,COG3285@1|root,COG1793@2|Bacteria,COG3285@2|Bacteria,1MVWY@1224|Proteobacteria,1RQ06@1236|Gammaproteobacteria,1X3QM@135614|Xanthomonadales 135614|Xanthomonadales L DNA ligase lig3 - 6.5.1.1 ko:K01971 ko03450,map03450 - R00381 RC00005 ko00000,ko00001,ko01000,ko03400 - - - DNA_ligase_A_C,DNA_ligase_A_M,LigD_N QTD1_k127_1000007_3 1038859.AXAU01000004_gene4428 1.659e-79 276.0 COG3571@1|root,COG3571@2|Bacteria,1RD20@1224|Proteobacteria,2U1XJ@28211|Alphaproteobacteria,3JSHJ@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria S hydrolase of the alpha beta-hydrolase fold - - - ko:K07020 - - - - ko00000 - - - Abhydrolase_6,DLH,Thioesterase QTD1_k127_1000007_2 1123073.KB899241_gene2314 4.013e-101 336.0 COG0366@1|root,COG2819@1|root,COG0366@2|Bacteria,COG2819@2|Bacteria,1RAB4@1224|Proteobacteria,1S2JK@1236|Gammaproteobacteria,1X7DU@135614|Xanthomonadales 135614|Xanthomonadales G Putative esterase - - - - - - - - - - - - Esterase QTD1_k127_1000007_6 682795.AciX8_4546 1.596e-48 178.0 COG0366@1|root,COG0366@2|Bacteria,3Y3QT@57723|Acidobacteria,2JI2C@204432|Acidobacteriia 204432|Acidobacteriia G Alpha-amylase domain - - 3.2.1.20 ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 - R00028,R00801,R00802,R06087,R06088 RC00028,RC00049,RC00077 ko00000,ko00001,ko01000 - GH31 - Alpha-amylase,DUF3459 QTD1_k127_1037847_2 582744.Msip34_0914 1.035e-56 213.0 COG0760@1|root,COG0760@2|Bacteria,1MZDK@1224|Proteobacteria,2VJZP@28216|Betaproteobacteria,2KKBZ@206350|Nitrosomonadales 206350|Nitrosomonadales M PFAM PpiC-type peptidyl-prolyl cis-trans isomerase - - 5.2.1.8 ko:K03769 - - - - ko00000,ko01000,ko03110 - - - Rotamase_3 QTD1_k127_1037847_5 383407.XOC_2710 1.487e-21 103.0 COG0271@1|root,COG0271@2|Bacteria,1QCDM@1224|Proteobacteria,1RTFD@1236|Gammaproteobacteria,1X7ES@135614|Xanthomonadales 135614|Xanthomonadales T Belongs to the BolA IbaG family - - - ko:K05527 - - - - ko00000,ko03000 - - - BolA QTD1_k127_1037847_3 1454004.AW11_00311 4.049e-37 143.0 COG2350@1|root,COG2350@2|Bacteria,1MZ9Z@1224|Proteobacteria,2VUM7@28216|Betaproteobacteria,1KQX3@119066|unclassified Betaproteobacteria 28216|Betaproteobacteria S YCII-related domain yciI - - ko:K09780 - - - - ko00000 - - - YCII QTD1_k127_1037847_4 1286093.C266_21774 1.169e-33 139.0 COG2917@1|root,COG2917@2|Bacteria,1NWIZ@1224|Proteobacteria,2VRHB@28216|Betaproteobacteria,1K076@119060|Burkholderiaceae 28216|Betaproteobacteria D probably involved in intracellular septation ispZ - - ko:K06190 - - - - ko00000 - - - IspA QTD1_k127_1037847_0 1288494.EBAPG3_1800 2.607e-83 281.0 COG0009@1|root,COG0009@2|Bacteria,1MVPM@1224|Proteobacteria,2VH4T@28216|Betaproteobacteria,3729G@32003|Nitrosomonadales 28216|Betaproteobacteria J Belongs to the SUA5 family yciO - - - - - - - - - - - Sua5_yciO_yrdC QTD1_k127_1037847_1 1123400.KB904773_gene3304 3.805e-64 226.0 COG1994@1|root,COG1994@2|Bacteria,1NSFF@1224|Proteobacteria,1S4N8@1236|Gammaproteobacteria,460HE@72273|Thiotrichales 72273|Thiotrichales S Peptidase M50 - - - - - - - - - - - - Peptidase_M50 QTD1_k127_1037847_6 682795.AciX8_4539 6.02e-09 57.0 COG0180@1|root,COG0180@2|Bacteria,3Y2VN@57723|Acidobacteria,2JHXI@204432|Acidobacteriia 204432|Acidobacteriia J aminoacyl-tRNA synthetase trpS - 6.1.1.2 ko:K01867 ko00970,map00970 M00359,M00360 R03664 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_1b QTD1_k127_1052960_11 1090319.KE386571_gene1544 1.598e-52 199.0 COG3653@1|root,COG3653@2|Bacteria,1MWWY@1224|Proteobacteria,2TSZZ@28211|Alphaproteobacteria,2K1RR@204457|Sphingomonadales 204457|Sphingomonadales Q Amidohydrolase family - - 3.5.1.81 ko:K06015 - - R02192 RC00064,RC00328 ko00000,ko01000 - - - Amidohydro_3 QTD1_k127_1052960_4 394221.Mmar10_2102 4.468e-101 350.0 COG0665@1|root,COG0665@2|Bacteria,1MVIZ@1224|Proteobacteria,2TRT9@28211|Alphaproteobacteria,43Y5F@69657|Hyphomonadaceae 28211|Alphaproteobacteria C D-amino acid dehydrogenase dadA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0008150,GO:0008152,GO:0008718,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009987,GO:0016020,GO:0016054,GO:0016491,GO:0016638,GO:0019478,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046144,GO:0046395,GO:0046416,GO:0046436,GO:0055114,GO:0055130,GO:0071704,GO:0071944,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.4.5.1 ko:K00285 ko00360,map00360 - R01374,R09493 RC00006,RC00025 ko00000,ko00001,ko01000 - - - DAO QTD1_k127_1052960_0 983917.RGE_15970 2.316e-302 932.0 COG0318@1|root,COG0318@2|Bacteria,1MUMC@1224|Proteobacteria,2VIJ8@28216|Betaproteobacteria,1KJ4H@119065|unclassified Burkholderiales 28216|Betaproteobacteria IQ PFAM AMP-dependent synthetase and ligase - - - ko:K00666 - - - - ko00000,ko01000,ko01004 - - - AMP-binding,AMP-binding_C QTD1_k127_1052960_6 1459636.NTE_00743 1.038e-92 312.0 COG3369@1|root,arCOG03174@2157|Archaea 2157|Archaea S SMART zinc finger, CDGSH-type domain protein - - - - - - - - - - - - Fer4_19,zf-CDGSH QTD1_k127_1052960_5 232721.Ajs_2697 2.055e-97 327.0 COG2326@1|root,COG2326@2|Bacteria,1MVE2@1224|Proteobacteria,2VGZV@28216|Betaproteobacteria,4AAJR@80864|Comamonadaceae 28216|Betaproteobacteria S Polyphosphate kinase 2 (PPK2) - - 2.7.4.1 ko:K22468 ko00190,ko03018,map00190,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - PPK2 QTD1_k127_1052960_7 1121920.AUAU01000007_gene506 1.208e-92 324.0 COG0477@1|root,COG2814@2|Bacteria,3Y6YQ@57723|Acidobacteria 57723|Acidobacteria EGP Major Facilitator Superfamily - - - - - - - - - - - - MFS_1 QTD1_k127_1052960_3 1123399.AQVE01000001_gene559 4.932e-130 428.0 COG0501@1|root,COG0501@2|Bacteria,1MUXT@1224|Proteobacteria,1RNKP@1236|Gammaproteobacteria,45ZWZ@72273|Thiotrichales 72273|Thiotrichales O PFAM Peptidase family M48 - - 3.4.24.84 ko:K06013 ko00900,ko01130,map00900,map01130 - R09845 RC00141 ko00000,ko00001,ko01000,ko01002,ko04147 - - - Peptidase_M48,Peptidase_M48_N QTD1_k127_1052960_14 745310.G432_09000 2.3e-09 65.0 28ZXZ@1|root,2ZMNF@2|Bacteria,1NM5Z@1224|Proteobacteria,2UWBC@28211|Alphaproteobacteria,2K81I@204457|Sphingomonadales 204457|Sphingomonadales - - - - - - - - - - - - - - - QTD1_k127_1052960_10 670292.JH26_11125 1.621e-63 226.0 COG1028@1|root,COG1028@2|Bacteria,1RA3U@1224|Proteobacteria,2U640@28211|Alphaproteobacteria 28211|Alphaproteobacteria IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - - - - - - - - - - adh_short,adh_short_C2 QTD1_k127_1052960_1 1198452.Jab_2c33660 1.002e-201 638.0 COG0624@1|root,COG0624@2|Bacteria,1MWJS@1224|Proteobacteria 1224|Proteobacteria E COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases - - - - - - - - - - - - M20_dimer,Peptidase_M20,Peptidase_M28 QTD1_k127_1052960_12 1449049.JONW01000005_gene1251 3.777e-33 136.0 COG3631@1|root,COG3631@2|Bacteria,1RDZR@1224|Proteobacteria,2UDVI@28211|Alphaproteobacteria 28211|Alphaproteobacteria S SnoaL-like domain - - - - - - - - - - - - SnoaL_2 QTD1_k127_1052960_8 234267.Acid_3826 1.042e-88 314.0 COG1807@1|root,COG1807@2|Bacteria 2|Bacteria M 4-amino-4-deoxy-L-arabinose transferase activity - - - - - - - - - - - - Glyco_transf_22,PMT_2 QTD1_k127_1052960_2 519989.ECTPHS_00430 1.12e-199 630.0 COG0104@1|root,COG0104@2|Bacteria,1MU5B@1224|Proteobacteria,1RNEW@1236|Gammaproteobacteria,1WW9J@135613|Chromatiales 135613|Chromatiales F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP purA - 6.3.4.4 ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 M00049 R01135 RC00458,RC00459 ko00000,ko00001,ko00002,ko01000 - - - Adenylsucc_synt QTD1_k127_1052960_15 765911.Thivi_0414 1.956e-08 58.0 COG3242@1|root,COG3242@2|Bacteria,1PU4I@1224|Proteobacteria,1TK3B@1236|Gammaproteobacteria,1WZE8@135613|Chromatiales 135613|Chromatiales S Uncharacterized protein conserved in bacteria (DUF2065) - - - ko:K09937 - - - - ko00000 - - - DUF2065 QTD1_k127_1052960_9 1122194.AUHU01000006_gene508 1.55e-65 240.0 COG0330@1|root,COG0330@2|Bacteria,1MV7R@1224|Proteobacteria,1RM8Z@1236|Gammaproteobacteria,465JS@72275|Alteromonadaceae 1236|Gammaproteobacteria O HflC and HflK could regulate a protease hflC GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0016020,GO:0016021,GO:0016787,GO:0019538,GO:0031224,GO:0031226,GO:0031233,GO:0032991,GO:0043086,GO:0043170,GO:0044092,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0098796,GO:0140096,GO:1901564 - ko:K04087 - M00742 - - ko00000,ko00002,ko01000 - - - Band_7 QTD1_k127_1052960_13 748247.AZKH_0813 2.395e-28 118.0 COG0330@1|root,COG0330@2|Bacteria,1MUM2@1224|Proteobacteria,2VIG2@28216|Betaproteobacteria,2KUKU@206389|Rhodocyclales 206389|Rhodocyclales O HflC and HflK could encode or regulate a protease - - - ko:K04088 - M00742 - - ko00000,ko00002,ko01000 - - - Band_7,HflK_N QTD1_k127_107685_3 1535422.ND16A_0646 1.293e-57 211.0 COG0758@1|root,COG0758@2|Bacteria,1N2UI@1224|Proteobacteria 1224|Proteobacteria LU DNA mediated transformation - - - - - - - - - - - - - QTD1_k127_107685_0 1320556.AVBP01000001_gene4455 5.472e-146 478.0 COG5598@1|root,COG5598@2|Bacteria,1R7R2@1224|Proteobacteria,2TUNM@28211|Alphaproteobacteria,43NQG@69277|Phyllobacteriaceae 28211|Alphaproteobacteria H Trimethylamine methyltransferase (MTTB) - - 2.1.1.250 ko:K14083 ko00680,ko01120,ko01200,map00680,map01120,map01200 M00563 R09124,R10016 RC00035,RC00732,RC01144,RC02984 ko00000,ko00001,ko00002,ko01000 - - - MTTB QTD1_k127_107685_2 296591.Bpro_1162 9.451e-60 225.0 COG3221@1|root,COG3221@2|Bacteria,1QJET@1224|Proteobacteria,2VIVQ@28216|Betaproteobacteria 28216|Betaproteobacteria P COG3221 ABC-type phosphate phosphonate transport system, periplasmic component - - - ko:K02044 ko02010,map02010 M00223 - - ko00000,ko00001,ko00002,ko02000 3.A.1.9 - - Phosphonate-bd QTD1_k127_107685_1 1380394.JADL01000004_gene6036 2.835e-96 325.0 COG3239@1|root,COG3239@2|Bacteria,1MXA8@1224|Proteobacteria,2TUQG@28211|Alphaproteobacteria,2JSA5@204441|Rhodospirillales 204441|Rhodospirillales I Fatty acid desaturase - - - - - - - - - - - - FA_desaturase QTD1_k127_107685_4 1122132.AQYH01000016_gene2882 2.05e-24 103.0 COG1174@1|root,COG1174@2|Bacteria,1MX8D@1224|Proteobacteria,2VETG@28211|Alphaproteobacteria,4BAJG@82115|Rhizobiaceae 28211|Alphaproteobacteria E ABC transporter yehW - - ko:K05845,ko:K05846 ko02010,map02010 M00209 - - ko00000,ko00001,ko00002,ko02000 3.A.1.12 - - BPD_transp_1 QTD1_k127_1091350_2 1502851.FG93_05443 1.323e-57 201.0 COG0477@1|root,COG0477@2|Bacteria,1MU46@1224|Proteobacteria,2TRAP@28211|Alphaproteobacteria,3JVB7@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria EGP Sugar (and other) transporter - - - - - - - - - - - - MFS_1,Sugar_tr QTD1_k127_1091350_0 1095769.CAHF01000015_gene2790 9.47e-145 482.0 COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2VH3V@28216|Betaproteobacteria,473EX@75682|Oxalobacteraceae 28216|Betaproteobacteria T TIGRFAM diguanylate cyclase (GGDEF) domain - - 2.7.7.65 ko:K21023 ko02025,map02025 - - - ko00000,ko00001,ko01000 - - - EAL,GGDEF,MHYT QTD1_k127_1091350_1 1122604.JONR01000070_gene4529 4.834e-99 344.0 COG3829@1|root,COG4191@1|root,COG3829@2|Bacteria,COG4191@2|Bacteria,1R3RN@1224|Proteobacteria,1S55D@1236|Gammaproteobacteria 1236|Gammaproteobacteria T Histidine kinase fixL - - - - - - - - - - - HATPase_c,PAS_3 QTD1_k127_1091350_3 1215092.PA6_021_00100 3.391e-18 99.0 COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,1RM8A@1236|Gammaproteobacteria 1236|Gammaproteobacteria T Diguanylate cyclase - - - - - - - - - - - - EAL,GAF,GAF_2,GGDEF,PAS,PAS_3,PAS_9,Response_reg QTD1_k127_1120125_10 1229780.BN381_130143 9.175e-09 56.0 2DREZ@1|root,33BFB@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - QTD1_k127_1120125_7 502025.Hoch_4498 2.344e-46 172.0 COG0537@1|root,COG0537@2|Bacteria,1PDTP@1224|Proteobacteria,42UAD@68525|delta/epsilon subdivisions,2WS0J@28221|Deltaproteobacteria,2Z2ZP@29|Myxococcales 28221|Deltaproteobacteria FG HIT domain - - - ko:K02503 - - - - ko00000,ko04147 - - - HIT QTD1_k127_1120125_0 56107.Cylst_3376 6.674e-205 644.0 COG1062@1|root,COG1062@2|Bacteria,1G2S4@1117|Cyanobacteria,1HJUP@1161|Nostocales 1117|Cyanobacteria C Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily frmA - 1.1.1.1,1.1.1.284 ko:K00121 ko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204 - R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R06983,R07105,R08281,R08306,R08310 RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01715,RC01734,RC02273 ko00000,ko00001,ko01000 - - - ADH_N,ADH_zinc_N QTD1_k127_1120125_4 1380391.JIAS01000011_gene4670 9.313e-85 284.0 COG3791@1|root,COG3791@2|Bacteria,1MX4A@1224|Proteobacteria,2TSAN@28211|Alphaproteobacteria,2JV7J@204441|Rhodospirillales 204441|Rhodospirillales S Glutathione-dependent formaldehyde-activating enzyme - - 4.4.1.22 ko:K03396 ko00680,ko01120,ko01200,map00680,map01120,map01200 - R06982 RC00069,RC01707 ko00000,ko00001,ko01000 - - - GFA QTD1_k127_1120125_1 69395.JQLZ01000003_gene214 1.639e-196 640.0 COG4805@1|root,COG4805@2|Bacteria,1MUBX@1224|Proteobacteria,2TSUQ@28211|Alphaproteobacteria,2KFHK@204458|Caulobacterales 204458|Caulobacterales S Bacterial protein of unknown function (DUF885) - - - - - - - - - - - - DUF885 QTD1_k127_1120125_2 1123073.KB899245_gene90 3.539e-135 445.0 COG2021@1|root,COG2021@2|Bacteria,1MVJV@1224|Proteobacteria,1RQ2N@1236|Gammaproteobacteria,1X88E@135614|Xanthomonadales 135614|Xanthomonadales E alpha/beta hydrolase fold - - - - - - - - - - - - Abhydrolase_1 QTD1_k127_1120125_3 1071679.BG57_29525 2.373e-126 415.0 COG1304@1|root,COG1304@2|Bacteria,1MUEZ@1224|Proteobacteria,2VHZV@28216|Betaproteobacteria,1KGJP@119060|Burkholderiaceae 28216|Betaproteobacteria C Dehydrogenase - - 1.1.99.31 ko:K15054 ko00627,ko01120,map00627,map01120 - R04160,R07664 RC00240 ko00000,ko00001,ko01000 - - - FMN_dh QTD1_k127_1120125_6 1049564.TevJSym_ab00470 4.235e-50 200.0 2A6A4@1|root,30V2R@2|Bacteria,1RENE@1224|Proteobacteria,1SNHE@1236|Gammaproteobacteria,1JA5P@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_1120125_8 316067.Geob_0280 4.184e-22 113.0 2DBPG@1|root,2ZA96@2|Bacteria,1QVNF@1224|Proteobacteria 2|Bacteria S Domain of unknown function (DUF4382) - - - - - - - - - - - - CarboxypepD_reg,DUF4382 QTD1_k127_1120125_5 717785.HYPMC_1655 1.177e-78 277.0 COG3975@1|root,COG3975@2|Bacteria,1N69B@1224|Proteobacteria,2U0ZK@28211|Alphaproteobacteria 28211|Alphaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_1120125_9 84531.JMTZ01000117_gene4265 6.565e-14 72.0 COG1820@1|root,COG1820@2|Bacteria,1MW8Y@1224|Proteobacteria,1RMRV@1236|Gammaproteobacteria,1X36K@135614|Xanthomonadales 135614|Xanthomonadales G Belongs to the metallo-dependent hydrolases superfamily. NagA family nagA - 3.5.1.25 ko:K01443 ko00520,ko01130,map00520,map01130 - R02059 RC00166,RC00300 ko00000,ko00001,ko01000 - - - Amidohydro_1 QTD1_k127_1130198_1 204669.Acid345_3020 4.36e-15 79.0 COG2834@1|root,COG2834@2|Bacteria,3Y7NW@57723|Acidobacteria 57723|Acidobacteria M Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - - - - - - - - - - - QTD1_k127_1130198_0 1267533.KB906739_gene2747 0.0 1292.0 COG4447@1|root,COG4447@2|Bacteria,3Y2SN@57723|Acidobacteria,2JIF7@204432|Acidobacteriia 204432|Acidobacteriia S Sortilin, neurotensin receptor 3, - - - - - - - - - - - - Sortilin-Vps10 QTD1_k127_1130216_5 1120983.KB894571_gene2622 2.891e-14 74.0 2C91B@1|root,33D4Z@2|Bacteria,1N875@1224|Proteobacteria,2UFUE@28211|Alphaproteobacteria 28211|Alphaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_1130216_3 1462527.CCDM010000002_gene971 2.157e-50 196.0 COG2855@1|root,COG2855@2|Bacteria,1TQYA@1239|Firmicutes,4HCCP@91061|Bacilli,23JQH@182709|Oceanobacillus 91061|Bacilli S Conserved hypothetical protein 698 - - - - - - - - - - - - Cons_hypoth698 QTD1_k127_1130216_2 1163407.UU7_06798 1.367e-94 314.0 COG0302@1|root,COG0302@2|Bacteria,1MY3N@1224|Proteobacteria,1RMQM@1236|Gammaproteobacteria,1X3YF@135614|Xanthomonadales 135614|Xanthomonadales F GTP cyclohydrolase folE GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 ko:K01495 ko00790,ko01100,map00790,map01100 M00126,M00841,M00842,M00843 R00428,R04639,R05046,R05048 RC00263,RC00294,RC00323,RC00945,RC01188 ko00000,ko00001,ko00002,ko01000 - - - GTP_cyclohydroI QTD1_k127_1130216_0 1000565.METUNv1_01306 2.103e-284 885.0 COG1217@1|root,COG1217@2|Bacteria,1MV5Q@1224|Proteobacteria,2VH2W@28216|Betaproteobacteria,2KUXJ@206389|Rhodocyclales 206389|Rhodocyclales T GTP-binding protein TypA typA - - ko:K06207 - - - - ko00000 - - - EFG_C,GTP_EFTU,GTP_EFTU_D2 QTD1_k127_1130216_4 1379270.AUXF01000004_gene2945 1.346e-25 111.0 2E3B5@1|root,32YAP@2|Bacteria,1ZUWQ@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Protein of unknown function (DUF2721) - - - - - - - - - - - - DUF2721 QTD1_k127_1130216_1 1122604.JONR01000029_gene3378 2.438e-142 466.0 COG4638@1|root,COG4638@2|Bacteria,1MWXW@1224|Proteobacteria,1S9NJ@1236|Gammaproteobacteria,1X5C8@135614|Xanthomonadales 135614|Xanthomonadales P COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - - 1.14.12.1,1.14.15.7 ko:K00499,ko:K16319 ko00260,ko00627,ko01120,map00260,map00627,map01120 M00637 R00823,R00825,R07409 RC00087,RC00192 br01602,ko00000,ko00001,ko00002,ko01000 - - - Rieske,Ring_hydroxyl_A QTD1_k127_116154_2 1236541.BALL01000010_gene1657 8.94e-62 222.0 COG0793@1|root,COG0793@2|Bacteria,1MU39@1224|Proteobacteria,1RMSR@1236|Gammaproteobacteria,2Q96B@267890|Shewanellaceae 1236|Gammaproteobacteria M Belongs to the peptidase S41A family prc GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016787,GO:0019538,GO:0023052,GO:0030163,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0046677,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.21.102 ko:K03797 - - - - ko00000,ko01000,ko01002 - - - BAGE,DUF3340,PDZ,Peptidase_S41 QTD1_k127_116154_0 269799.Gmet_2352 5.391e-110 365.0 COG0673@1|root,COG0673@2|Bacteria,1MV7C@1224|Proteobacteria,42NV0@68525|delta/epsilon subdivisions,2WK1Y@28221|Deltaproteobacteria,43T3I@69541|Desulfuromonadales 28221|Deltaproteobacteria S Oxidoreductase family, NAD-binding Rossmann fold gnnA - - ko:K09949 - - - - ko00000 - - iAF987.Gmet_2352 GFO_IDH_MocA,GFO_IDH_MocA_C QTD1_k127_116154_1 1215092.PA6_003_01370 2.641e-105 364.0 COG0388@1|root,COG0388@2|Bacteria,1MXG5@1224|Proteobacteria,1RP7S@1236|Gammaproteobacteria,1YCZX@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria S Carbon-nitrogen hydrolase aguB - 3.5.1.53 ko:K12251 ko00330,ko01100,map00330,map01100 - R01152 RC00096 ko00000,ko00001,ko01000 - - - CN_hydrolase QTD1_k127_1188005_0 396588.Tgr7_2456 1.924e-187 592.0 COG2609@1|root,COG2609@2|Bacteria,1MV21@1224|Proteobacteria,1RN6K@1236|Gammaproteobacteria,1WWE0@135613|Chromatiales 135613|Chromatiales C Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) aceE - 1.2.4.1 ko:K00163 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200 M00307 R00014,R00209,R01699,R03270 RC00004,RC00027,RC00627,RC02742,RC02744,RC02882 br01601,ko00000,ko00001,ko00002,ko01000 - - - Transketolase_N QTD1_k127_1188005_2 349124.Hhal_1036 1.955e-142 467.0 COG0508@1|root,COG0508@2|Bacteria,1MU7K@1224|Proteobacteria,1RNPT@1236|Gammaproteobacteria,1WW8D@135613|Chromatiales 135613|Chromatiales C The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) - - 2.3.1.12 ko:K00627 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200 M00307 R00209,R02569 RC00004,RC02742,RC02857 br01601,ko00000,ko00001,ko00002,ko01000 - - - 2-oxoacid_dh,Biotin_lipoyl,E3_binding QTD1_k127_1188005_1 228410.NE2157 4.697e-170 564.0 COG1249@1|root,COG1249@2|Bacteria,1MU2U@1224|Proteobacteria,2VI6G@28216|Betaproteobacteria,372TA@32003|Nitrosomonadales 28216|Betaproteobacteria C Pyridine nucleotide-disulphide oxidoreductase, dimerisation lpdA GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00036,M00307,M00532 R00209,R01221,R01698,R03815,R07618,R08549 RC00004,RC00022,RC00583,RC02742,RC02833,RC02834 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 - - - Biotin_lipoyl,Pyr_redox_2,Pyr_redox_dim QTD1_k127_1245384_10 1231391.AMZF01000015_gene2242 1.046e-10 63.0 COG0712@1|root,COG0712@2|Bacteria,1MVRH@1224|Proteobacteria,2VSJV@28216|Betaproteobacteria,3T93T@506|Alcaligenaceae 28216|Betaproteobacteria C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation atpH - - ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - OSCP QTD1_k127_1245384_0 1123487.KB892857_gene2498 3.197e-270 837.0 COG0056@1|root,COG0056@2|Bacteria,1MUG7@1224|Proteobacteria,2VHQU@28216|Betaproteobacteria,2KV0S@206389|Rhodocyclales 206389|Rhodocyclales C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit atpA - 3.6.3.14 ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194,ko01000 3.A.2.1 - - ATP-synt_ab,ATP-synt_ab_C,ATP-synt_ab_N QTD1_k127_1245384_5 472759.Nhal_3947 3.178e-112 370.0 COG0224@1|root,COG0224@2|Bacteria,1MU28@1224|Proteobacteria,1RNWJ@1236|Gammaproteobacteria,1WW4K@135613|Chromatiales 135613|Chromatiales C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex atpG - - ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - ATP-synt QTD1_k127_1245384_2 1123256.KB907925_gene1530 4.59e-239 755.0 COG0055@1|root,COG0055@2|Bacteria,1MUFU@1224|Proteobacteria,1RN6U@1236|Gammaproteobacteria,1X3WS@135614|Xanthomonadales 135614|Xanthomonadales C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits atpD - 3.6.3.14 ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194,ko01000 3.A.2.1 - - ATP-synt_ab,ATP-synt_ab_N QTD1_k127_1245384_8 323261.Noc_3073 2.083e-41 173.0 COG0355@1|root,COG0355@2|Bacteria,1RHE4@1224|Proteobacteria,1S25H@1236|Gammaproteobacteria,1WY0Q@135613|Chromatiales 135613|Chromatiales C Produces ATP from ADP in the presence of a proton gradient across the membrane atpC - - ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - ATP-synt_DE,ATP-synt_DE_N QTD1_k127_1245384_7 686340.Metal_2829 1.167e-58 222.0 COG4249@1|root,COG4249@2|Bacteria,1QU7W@1224|Proteobacteria,1RZ8P@1236|Gammaproteobacteria,1XG8B@135618|Methylococcales 135618|Methylococcales S Peptidase C13 family - - - - - - - - - - - - Peptidase_C13 QTD1_k127_1245384_4 292415.Tbd_2794 1.905e-152 500.0 COG1207@1|root,COG1207@2|Bacteria,1MUPH@1224|Proteobacteria,2VH54@28216|Betaproteobacteria,1KS90@119069|Hydrogenophilales 119069|Hydrogenophilales M 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase - - 2.3.1.157,2.7.7.23 ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 M00362 R00416,R05332 RC00002,RC00004,RC00166 ko00000,ko00001,ko00002,ko01000 - - - Hexapep,NTP_transf_3 QTD1_k127_1245384_1 1122603.ATVI01000011_gene2091 4.327e-268 839.0 COG0449@1|root,COG0449@2|Bacteria,1MW4K@1224|Proteobacteria,1RMVN@1236|Gammaproteobacteria,1X43R@135614|Xanthomonadales 135614|Xanthomonadales M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source glmS GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 - R00768 RC00010,RC00163,RC02752 ko00000,ko00001,ko01000,ko01002 - - - GATase_6,SIS QTD1_k127_1245384_3 1163409.UUA_15643 1.853e-175 571.0 COG0659@1|root,COG0659@2|Bacteria,1MWDF@1224|Proteobacteria,1SYC8@1236|Gammaproteobacteria,1X5E4@135614|Xanthomonadales 135614|Xanthomonadales P Sulfate permease family - - - - - - - - - - - - STAS,Sulfate_transp QTD1_k127_1245384_9 56780.SYN_01961 2.012e-16 87.0 COG3409@1|root,COG3409@2|Bacteria 2|Bacteria M Peptidoglycan-binding domain 1 protein - - - - - - - - - - - - Glyco_hydro_25,LysM,PG_binding_1,Peptidase_C14 QTD1_k127_1245384_6 1131553.JIBI01000010_gene1351 8.87e-101 334.0 COG0621@1|root,COG0621@2|Bacteria,1MU7N@1224|Proteobacteria,2VI16@28216|Betaproteobacteria,372H1@32003|Nitrosomonadales 28216|Betaproteobacteria J Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 rimO - 2.8.4.4 ko:K14441 - - R10652 RC00003,RC03217 ko00000,ko01000,ko03009 - - - Radical_SAM,TRAM,UPF0004 QTD1_k127_1263846_4 1049564.TevJSym_ar00050 0.0006968 44.0 COG3147@1|root,COG3147@2|Bacteria,1NGE3@1224|Proteobacteria,1SCGC@1236|Gammaproteobacteria,1J6N7@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria S Sporulation related domain dedD - - ko:K03749 - - - - ko00000 - - - SPOR QTD1_k127_1263846_2 765912.Thimo_2644 2.271e-24 109.0 COG1286@1|root,COG1286@2|Bacteria,1NF4G@1224|Proteobacteria,1RQ58@1236|Gammaproteobacteria,1WY7W@135613|Chromatiales 135613|Chromatiales S Colicin V production protein - - - ko:K03558 - - - - ko00000 - - - Colicin_V QTD1_k127_1263846_0 1283300.ATXB01000001_gene1631 2.975e-227 713.0 COG0034@1|root,COG0034@2|Bacteria,1MU0V@1224|Proteobacteria,1RMYA@1236|Gammaproteobacteria,1XETA@135618|Methylococcales 135618|Methylococcales F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine purF - 2.4.2.14 ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048 R01072 RC00010,RC02724,RC02752 ko00000,ko00001,ko00002,ko01000,ko01002 - - - GATase_6,Pribosyltran QTD1_k127_1263846_1 713586.KB900536_gene2981 4.235e-84 295.0 COG2379@1|root,COG2379@2|Bacteria,1MVIK@1224|Proteobacteria,1RPKA@1236|Gammaproteobacteria,1WXPP@135613|Chromatiales 135613|Chromatiales G pfam mofrl - - 2.7.1.165 ko:K11529 ko00030,ko00260,ko00561,ko00630,ko00680,ko01100,ko01120,ko01130,ko01200,map00030,map00260,map00561,map00630,map00680,map01100,map01120,map01130,map01200 M00346 R08572 RC00002,RC00428 ko00000,ko00001,ko00002,ko01000 - - - DUF4147,MOFRL QTD1_k127_1263846_3 614083.AWQR01000001_gene3031 6.16e-18 94.0 COG0515@1|root,COG0745@1|root,COG0515@2|Bacteria,COG0745@2|Bacteria,1MV1P@1224|Proteobacteria,2VKJ8@28216|Betaproteobacteria 28216|Betaproteobacteria KLT serine threonine protein kinase - - 2.7.11.1 ko:K11912,ko:K12132 ko02025,ko03070,map02025,map03070 - - - ko00000,ko00001,ko01000,ko01001,ko02044 - - - HAMP,Pkinase QTD1_k127_1268951_0 713586.KB900536_gene2210 3.157e-207 659.0 COG0210@1|root,COG0210@2|Bacteria,1MU0G@1224|Proteobacteria,1RNJI@1236|Gammaproteobacteria,1WWI3@135613|Chromatiales 135613|Chromatiales L PFAM UvrD REP helicase uvrD - 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - UvrD-helicase,UvrD_C QTD1_k127_1268951_2 768671.ThimaDRAFT_2361 8.746e-180 582.0 COG0569@1|root,COG0569@2|Bacteria,1MW8R@1224|Proteobacteria,1RNVQ@1236|Gammaproteobacteria,1WVX7@135613|Chromatiales 135613|Chromatiales P PFAM TrkA-N domain trkA - - ko:K03499 - - - - ko00000,ko02000 2.A.38.1,2.A.38.4 - - TrkA_C,TrkA_N QTD1_k127_1268951_3 395494.Galf_0133 1.259e-164 532.0 COG0168@1|root,COG0168@2|Bacteria,1MUIJ@1224|Proteobacteria,2VH82@28216|Betaproteobacteria,44W7S@713636|Nitrosomonadales 28216|Betaproteobacteria P Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA - - - ko:K03498 - - - - ko00000,ko02000 2.A.38.1,2.A.38.4 - - TrkH QTD1_k127_1268951_5 1234364.AMSF01000082_gene2993 1.165e-126 424.0 COG0477@1|root,COG2814@2|Bacteria,1QTW0@1224|Proteobacteria,1T2CZ@1236|Gammaproteobacteria 1236|Gammaproteobacteria EGP Major Facilitator proP - - ko:K03762 - - - - ko00000,ko02000 2.A.1.6.4 - iJN746.PP_2703 MFS_1,Sugar_tr QTD1_k127_1268951_4 84531.JMTZ01000055_gene2578 4.435e-143 462.0 COG1680@1|root,COG1680@2|Bacteria,1MVPR@1224|Proteobacteria,1S5WE@1236|Gammaproteobacteria,1X3ZI@135614|Xanthomonadales 135614|Xanthomonadales V beta-lactamase - - - - - - - - - - - - Beta-lactamase QTD1_k127_1268951_7 234267.Acid_7089 6.533e-20 105.0 COG3710@1|root,COG5616@1|root,COG3710@2|Bacteria,COG5616@2|Bacteria,3Y2Q2@57723|Acidobacteria 57723|Acidobacteria KU WD40-like Beta Propeller - - - - - - - - - - - - PD40,Trans_reg_C QTD1_k127_1268951_1 1123073.KB899242_gene1519 1.228e-182 594.0 COG0823@1|root,COG0823@2|Bacteria,1NKG5@1224|Proteobacteria 1224|Proteobacteria U Involved in the tonB-independent uptake of proteins - - - - - - - - - - - - PD40 QTD1_k127_1268951_6 1500893.JQNB01000001_gene1609 2.821e-47 181.0 COG2905@1|root,COG2905@2|Bacteria,1QTTR@1224|Proteobacteria,1SBBF@1236|Gammaproteobacteria,1XDAF@135614|Xanthomonadales 135614|Xanthomonadales T Domain in cystathionine beta-synthase and other proteins. - - - - - - - - - - - - CBS QTD1_k127_1268951_8 1089553.Tph_c20930 4.454e-16 83.0 COG2968@1|root,COG2968@2|Bacteria,1VB7C@1239|Firmicutes,24MYD@186801|Clostridia,42HAP@68295|Thermoanaerobacterales 186801|Clostridia S Protein of unknown function (DUF541) - - - ko:K09807 - - - - ko00000 - - - SIMPL QTD1_k127_1278568_8 913325.N799_04740 2.126e-81 279.0 COG1462@1|root,COG1462@2|Bacteria,1QURH@1224|Proteobacteria,1T2IH@1236|Gammaproteobacteria,1X5KV@135614|Xanthomonadales 135614|Xanthomonadales M protein involved in formation of curli polymers - - - - - - - - - - - - CsgG QTD1_k127_1278568_9 568706.BN118_2860 2.053e-65 231.0 COG1335@1|root,COG1335@2|Bacteria,1RARV@1224|Proteobacteria,2VQ7T@28216|Betaproteobacteria,3T5BI@506|Alcaligenaceae 28216|Betaproteobacteria Q Isochorismatase family - - - - - - - - - - - - Isochorismatase QTD1_k127_1278568_4 1392838.AWNM01000070_gene1184 5.222e-97 333.0 COG4977@1|root,COG4977@2|Bacteria,1MUDK@1224|Proteobacteria,2VHDN@28216|Betaproteobacteria,3T4BJ@506|Alcaligenaceae 28216|Betaproteobacteria K Transcriptional regulator - - - - - - - - - - - - DJ-1_PfpI,HTH_18 QTD1_k127_1278568_10 1122604.JONR01000003_gene1556 2.926e-62 221.0 COG1651@1|root,COG1651@2|Bacteria,1RGWH@1224|Proteobacteria,1S5WA@1236|Gammaproteobacteria,1X5HB@135614|Xanthomonadales 135614|Xanthomonadales O Thiol disulfide interchange protein - - - ko:K03673 ko01503,map01503 M00728 - - ko00000,ko00001,ko00002,ko03110 - - - DSBA,Thioredoxin_4 QTD1_k127_1278568_5 518766.Rmar_1612 5.551e-97 342.0 COG1446@1|root,COG1446@2|Bacteria,4NF1U@976|Bacteroidetes,1FIR4@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes E Asparaginase - - 3.4.19.5 ko:K13051 - - - - ko00000,ko01000,ko01002 - - - Asparaginase_2 QTD1_k127_1278568_3 483219.LILAB_02805 5.046e-102 342.0 COG1446@1|root,COG1446@2|Bacteria,1MWFC@1224|Proteobacteria,42NRH@68525|delta/epsilon subdivisions,2WNIB@28221|Deltaproteobacteria,2YV7G@29|Myxococcales 28221|Deltaproteobacteria E Asparaginase - - 3.4.19.5 ko:K13051 - - - - ko00000,ko01000,ko01002 - - - Asparaginase_2 QTD1_k127_1278568_0 1244869.H261_01956 0.0 1508.0 COG1038@1|root,COG1038@2|Bacteria,1NW9R@1224|Proteobacteria,2TQXU@28211|Alphaproteobacteria,2JQHD@204441|Rhodospirillales 204441|Rhodospirillales C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second - - 6.4.1.1 ko:K01958 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 M00173 R00344 RC00040,RC00367 ko00000,ko00001,ko00002,ko01000 - - - Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2,HMGL-like,PYC_OADA QTD1_k127_1278568_2 296591.Bpro_5300 1.006e-118 397.0 COG0446@1|root,COG0446@2|Bacteria,1NR3M@1224|Proteobacteria,2VJSV@28216|Betaproteobacteria,4AAZZ@80864|Comamonadaceae 28216|Betaproteobacteria O PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - 1.18.1.3 ko:K00529 ko00071,ko00360,ko01120,ko01220,map00071,map00360,map01120,map01220 M00545 R02000,R06782,R06783 RC00098 br01602,ko00000,ko00001,ko00002,ko01000 - - - AIF_C,Pyr_redox_2,Reductase_C QTD1_k127_1278568_11 686340.Metal_2278 2.752e-49 185.0 COG0347@1|root,COG0347@2|Bacteria,1RGWK@1224|Proteobacteria,1S67I@1236|Gammaproteobacteria 1236|Gammaproteobacteria K Belongs to the P(II) protein family glnK - - ko:K04751,ko:K04752 ko02020,map02020 - - - ko00000,ko00001 - - - P-II QTD1_k127_1278568_1 713586.KB900536_gene841 4.609e-122 400.0 COG0604@1|root,COG0604@2|Bacteria,1MWBD@1224|Proteobacteria,1RPCQ@1236|Gammaproteobacteria,1X2AC@135613|Chromatiales 135613|Chromatiales C N-terminal domain of oxidoreductase - - 1.6.5.5 ko:K00344 - - - - ko00000,ko01000 - - - ADH_N,ADH_zinc_N QTD1_k127_1278568_6 685778.AORL01000004_gene3476 1.748e-96 334.0 COG0531@1|root,COG0531@2|Bacteria,1RF4X@1224|Proteobacteria,2VG30@28211|Alphaproteobacteria,2KE12@204457|Sphingomonadales 204457|Sphingomonadales E Amino acid permease - - - - - - - - - - - - AA_permease_2 QTD1_k127_1278568_12 396588.Tgr7_2157 3.31e-45 171.0 COG0440@1|root,COG0440@2|Bacteria,1RAGN@1224|Proteobacteria,1S20I@1236|Gammaproteobacteria,1WXGS@135613|Chromatiales 135613|Chromatiales E TIGRFAM Acetolactate synthase, small subunit - - 2.2.1.6 ko:K01653 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 - - - ACT_5,ALS_ss_C QTD1_k127_1278568_7 1123261.AXDW01000005_gene2602 5.527e-95 320.0 COG0028@1|root,COG0028@2|Bacteria,1MU6U@1224|Proteobacteria,1RMQQ@1236|Gammaproteobacteria,1X45G@135614|Xanthomonadales 135614|Xanthomonadales E Acetolactate synthase - - 2.2.1.6 ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N QTD1_k127_1295594_1 1163617.SCD_n01749 9.017e-71 252.0 COG1807@1|root,COG1807@2|Bacteria,1NMIZ@1224|Proteobacteria,2VMHK@28216|Betaproteobacteria 28216|Betaproteobacteria M PFAM glycosyl transferase family 39 arnT - - - - - - - - - - - PMT,PMT_2 QTD1_k127_1295594_2 1500897.JQNA01000002_gene407 6.227e-25 111.0 COG2076@1|root,COG2076@2|Bacteria,1RHUW@1224|Proteobacteria,2VSEI@28216|Betaproteobacteria,1K7S1@119060|Burkholderiaceae 28216|Betaproteobacteria P Small Multidrug Resistance protein - - - - - - - - - - - - EamA,Multi_Drug_Res QTD1_k127_1295594_0 1163617.SCD_n01751 2.529e-152 494.0 COG0399@1|root,COG0399@2|Bacteria,1MUPN@1224|Proteobacteria,2VJDZ@28216|Betaproteobacteria 28216|Betaproteobacteria E Belongs to the DegT DnrJ EryC1 family - - - - - - - - - - - - DegT_DnrJ_EryC1 QTD1_k127_130247_8 395964.KE386496_gene2819 9.557e-65 234.0 COG2187@1|root,COG2187@2|Bacteria,1MU9M@1224|Proteobacteria,2TQJN@28211|Alphaproteobacteria,3NAZ0@45404|Beijerinckiaceae 28211|Alphaproteobacteria S Aminoglycoside phosphotransferase - - - - - - - - - - - - - QTD1_k127_130247_2 1304275.C41B8_17868 2.724e-191 619.0 COG1236@1|root,COG1236@2|Bacteria,1MUDD@1224|Proteobacteria,1RPZC@1236|Gammaproteobacteria 1236|Gammaproteobacteria J exonuclease of the beta-lactamase fold involved in RNA processing - - - ko:K07576 - - - - ko00000 - - - Beta-Casp,Lactamase_B,RMMBL QTD1_k127_130247_0 402626.Rpic_4385 3.957e-244 769.0 COG0465@1|root,COG0465@2|Bacteria,1MU6J@1224|Proteobacteria,2VHEM@28216|Betaproteobacteria,1K0XH@119060|Burkholderiaceae 28216|Betaproteobacteria O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins - - - ko:K03798 - M00742 - - ko00000,ko00002,ko01000,ko01002,ko03110 - - - AAA,FtsH_ext,Peptidase_M41 QTD1_k127_130247_7 1297742.A176_05554 6.418e-80 276.0 COG1796@1|root,COG1796@2|Bacteria,1QF8Z@1224|Proteobacteria,439QP@68525|delta/epsilon subdivisions,2X537@28221|Deltaproteobacteria,2Z01T@29|Myxococcales 28221|Deltaproteobacteria L Helix-hairpin-helix domain dpbF - - - - - - - - - - - HHH_5,HHH_8 QTD1_k127_130247_9 1121927.GOHSU_40_00280 3.676e-48 181.0 COG4119@1|root,COG4119@2|Bacteria,2IM6D@201174|Actinobacteria,4GE40@85026|Gordoniaceae 201174|Actinobacteria L NUDIX domain - - - - - - - - - - - - NUDIX QTD1_k127_130247_1 1123240.ATVO01000005_gene1943 3.108e-217 692.0 COG0405@1|root,COG0405@2|Bacteria,1MUV6@1224|Proteobacteria,2TQWP@28211|Alphaproteobacteria,2K18S@204457|Sphingomonadales 204457|Sphingomonadales E gamma-glutamyltransferase - - 2.3.2.2,3.4.19.13 ko:K00681 ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100 - R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935 RC00064,RC00090,RC00096 ko00000,ko00001,ko01000,ko01002 - - - G_glu_transpept QTD1_k127_130247_10 74545.EU96_1771 1.654e-37 151.0 COG1633@1|root,COG1633@2|Bacteria,1GP06@1117|Cyanobacteria,1MNKH@1212|Prochloraceae 1117|Cyanobacteria S Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - - - - - - - - - - - QTD1_k127_130247_5 1380355.JNIJ01000008_gene2004 1.369e-84 304.0 COG2421@1|root,COG2421@2|Bacteria,1MVRT@1224|Proteobacteria,2U62I@28211|Alphaproteobacteria,3JYGI@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria C Acetamidase/Formamidase family - - - - - - - - - - - - FmdA_AmdA QTD1_k127_130247_11 589865.DaAHT2_0097 1.205e-20 95.0 COG1872@1|root,COG1872@2|Bacteria 2|Bacteria I DUF167 CP_0257 - - ko:K09131 - - - - ko00000 - - - DUF167 QTD1_k127_130247_3 1317124.DW2_15795 1.97e-179 583.0 COG3511@1|root,COG3511@2|Bacteria,1MVNS@1224|Proteobacteria,2U1QU@28211|Alphaproteobacteria,2XNW2@285107|Thioclava 28211|Alphaproteobacteria M Phosphoesterase family - - 3.1.4.3 ko:K01114 ko00562,ko00564,ko00565,ko01100,ko01110,ko02024,ko04919,map00562,map00564,map00565,map01100,map01110,map02024,map04919 - R01312,R02027,R02052,R03332,R07381 RC00017,RC00425 ko00000,ko00001,ko01000,ko02042 - - - Phosphoesterase QTD1_k127_130247_4 1234364.AMSF01000024_gene3782 1.348e-95 325.0 COG0657@1|root,COG0657@2|Bacteria,1RD8A@1224|Proteobacteria,1S3TH@1236|Gammaproteobacteria,1X6NT@135614|Xanthomonadales 135614|Xanthomonadales I alpha/beta hydrolase fold aes - - - - - - - - - - - Abhydrolase_3 QTD1_k127_130247_6 1379270.AUXF01000001_gene2153 1.157e-80 277.0 2BS4J@1|root,32M5G@2|Bacteria,1ZUJX@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - QTD1_k127_1319908_1 396588.Tgr7_0189 2.43e-71 250.0 COG1192@1|root,COG1192@2|Bacteria,1QBJX@1224|Proteobacteria,1S739@1236|Gammaproteobacteria 1236|Gammaproteobacteria D involved in chromosome partitioning - - - ko:K03496 - - - - ko00000,ko03036,ko04812 - - - AAA_31,CbiA QTD1_k127_1319908_0 1479237.JMLY01000001_gene2066 1.455e-243 768.0 COG0326@1|root,COG0326@2|Bacteria,1MUUE@1224|Proteobacteria,1RNWD@1236|Gammaproteobacteria,4647F@72275|Alteromonadaceae 1236|Gammaproteobacteria O Molecular chaperone. Has ATPase activity htpG GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006950,GO:0006974,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0042623,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 - ko:K04079 ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418 - - - ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147 - - - HATPase_c,HATPase_c_3,HSP90 QTD1_k127_1319908_3 1123073.KB899241_gene2657 2.994e-53 195.0 COG2945@1|root,COG2945@2|Bacteria,1MUDY@1224|Proteobacteria,1S6R4@1236|Gammaproteobacteria,1XC0H@135614|Xanthomonadales 135614|Xanthomonadales S X-Pro dipeptidyl-peptidase (S15 family) - - - ko:K07018 - - - - ko00000 - - - Hydrolase_4 QTD1_k127_1319908_2 1300345.LF41_813 1.101e-63 227.0 COG2885@1|root,COG2885@2|Bacteria,1MYBP@1224|Proteobacteria,1RVRF@1236|Gammaproteobacteria,1X4JP@135614|Xanthomonadales 135614|Xanthomonadales M Belongs to the ompA family - - - - - - - - - - - - Gly-zipper_Omp,Gly-zipper_YMGG,OmpA QTD1_k127_1319908_4 883080.HMPREF9697_02378 2.857e-34 133.0 COG0776@1|root,COG0776@2|Bacteria,1RFWH@1224|Proteobacteria,2U9D0@28211|Alphaproteobacteria,3JZCP@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria L Belongs to the bacterial histone-like protein family hupA - - - - - - - - - - - Bac_DNA_binding QTD1_k127_1327822_14 13690.CP98_02410 2.863e-09 61.0 COG0477@1|root,COG2814@2|Bacteria,1QUTR@1224|Proteobacteria,2TW7A@28211|Alphaproteobacteria,2K3J5@204457|Sphingomonadales 204457|Sphingomonadales EGP Major Facilitator Superfamily - - - ko:K08223 - - - - ko00000,ko02000 2.A.1.35 - - MFS_1 QTD1_k127_1327822_2 1123073.KB899243_gene664 1.057e-159 516.0 COG0534@1|root,COG0534@2|Bacteria,1MVRV@1224|Proteobacteria,1RRDQ@1236|Gammaproteobacteria,1X4AT@135614|Xanthomonadales 135614|Xanthomonadales V MatE - - - - - - - - - - - - MatE QTD1_k127_1327822_10 935863.AWZR01000004_gene620 7.451e-51 192.0 COG2930@1|root,COG2930@2|Bacteria,1RHV6@1224|Proteobacteria,1SDNN@1236|Gammaproteobacteria,1X44C@135614|Xanthomonadales 135614|Xanthomonadales S Las17-binding protein actin regulator - - - - - - - - - - - - Ysc84 QTD1_k127_1327822_5 1049564.TevJSym_aj00110 4.401e-103 349.0 COG2831@1|root,COG2831@2|Bacteria,1QW38@1224|Proteobacteria,1T2R4@1236|Gammaproteobacteria,1J75U@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria U Protein of unknown function (DUF3570) - - - - - - - - - - - - DUF3570 QTD1_k127_1327822_13 1120953.AUBH01000005_gene2478 1.454e-20 95.0 2E3QA@1|root,32YN8@2|Bacteria,1N98P@1224|Proteobacteria,1SCNQ@1236|Gammaproteobacteria,468BH@72275|Alteromonadaceae 1236|Gammaproteobacteria S Domain of unknown function (DUF4266) - - - - - - - - - - - - DUF4266 QTD1_k127_1327822_8 1117647.M5M_12200 1.974e-55 198.0 COG0526@1|root,COG0526@2|Bacteria,1MZ36@1224|Proteobacteria,1S8UU@1236|Gammaproteobacteria,1J6KV@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria CO Thioredoxin-like resA - - - - - - - - - - - AhpC-TSA,Redoxin QTD1_k127_1327822_9 1121935.AQXX01000098_gene1655 3.202e-55 201.0 COG3637@1|root,COG3637@2|Bacteria,1RDPZ@1224|Proteobacteria,1S4GQ@1236|Gammaproteobacteria,1XP8B@135619|Oceanospirillales 135619|Oceanospirillales M Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - - - - - - - - - - OMP_b-brl QTD1_k127_1327822_7 349521.HCH_02595 4.743e-56 206.0 COG3807@1|root,COG3807@2|Bacteria,1RE8W@1224|Proteobacteria,1S4BU@1236|Gammaproteobacteria,1XPIQ@135619|Oceanospirillales 135619|Oceanospirillales S COG3103 SH3 domain protein - - - - - - - - - - - - OMP_b-brl,SH3_3,SH3_4 QTD1_k127_1327822_1 1049564.TevJSym_aj00060 9.617e-181 602.0 COG0823@1|root,COG0823@2|Bacteria,1R3VN@1224|Proteobacteria,1RNKG@1236|Gammaproteobacteria,1J98N@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria U COG0823 Periplasmic component of the Tol biopolymer transport system - - - - - - - - - - - - PD40 QTD1_k127_1327822_4 1453501.JELR01000002_gene1335 4.101e-118 392.0 28HN6@1|root,2Z7WJ@2|Bacteria,1R5QB@1224|Proteobacteria,1RNJN@1236|Gammaproteobacteria,4667S@72275|Alteromonadaceae 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_1327822_0 1049564.TevJSym_aj00040 1.235e-187 627.0 COG2755@1|root,COG2755@2|Bacteria,1MXTS@1224|Proteobacteria,1RTPH@1236|Gammaproteobacteria,1J9AM@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria E Concanavalin A-like lectin/glucanases superfamily - - - - - - - - - - - - Laminin_G_3 QTD1_k127_1327822_3 1085623.GNIT_3661 3.135e-126 422.0 2BWPY@1|root,2Z8BI@2|Bacteria,1QHHB@1224|Proteobacteria,1RP8D@1236|Gammaproteobacteria,4657P@72275|Alteromonadaceae 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_1327822_12 1122194.AUHU01000011_gene1676 1.264e-29 132.0 COG0526@1|root,COG0526@2|Bacteria,1MZ36@1224|Proteobacteria,1S8UU@1236|Gammaproteobacteria,4677J@72275|Alteromonadaceae 1236|Gammaproteobacteria CO Thioredoxin-like resA - - - - - - - - - - - AhpC-TSA,Redoxin QTD1_k127_1327822_11 1127673.GLIP_2934 1.857e-45 175.0 2B4XH@1|root,31XQC@2|Bacteria,1RHJF@1224|Proteobacteria,1S3S1@1236|Gammaproteobacteria,467JQ@72275|Alteromonadaceae 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_1327822_6 420662.Mpe_A1224 2.54e-58 216.0 COG0457@1|root,COG0457@2|Bacteria,1MXSS@1224|Proteobacteria,2VZB4@28216|Betaproteobacteria,1KN0Q@119065|unclassified Burkholderiales 28216|Betaproteobacteria S Tetratricopeptide repeat - - - - - - - - - - - - - QTD1_k127_1351372_2 83406.HDN1F_06900 4.636e-98 339.0 COG0488@1|root,COG0488@2|Bacteria,1MU37@1224|Proteobacteria,1RPWS@1236|Gammaproteobacteria,1J503@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria S COG0488 ATPase components of ABC transporters with duplicated ATPase domains yjjK GO:0003674,GO:0003824,GO:0005488,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:2000112,GO:2000113 3.6.3.25 ko:K06020 - - - - ko00000,ko01000 - - - ABC_tran,ABC_tran_Xtn QTD1_k127_1351372_1 1123368.AUIS01000007_gene2819 2.169e-119 391.0 COG0123@1|root,COG0123@2|Bacteria,1MU7P@1224|Proteobacteria,1RN8W@1236|Gammaproteobacteria,2NCEM@225057|Acidithiobacillales 1236|Gammaproteobacteria BQ Histone deacetylase domain - - - ko:K04768 - - - - ko00000 - - - Hist_deacetyl QTD1_k127_1351372_0 349521.HCH_03860 4.213e-203 641.0 COG0112@1|root,COG0112@2|Bacteria,1MUIS@1224|Proteobacteria,1RMHQ@1236|Gammaproteobacteria,1XH2G@135619|Oceanospirillales 135619|Oceanospirillales E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism glyA - 2.1.2.1 ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 M00140,M00141,M00346,M00532 R00945,R09099 RC00022,RC00112,RC01583,RC02958 ko00000,ko00001,ko00002,ko01000 - - - SHMT QTD1_k127_1351372_3 95619.PM1_0200995 2.742e-58 205.0 COG1327@1|root,COG1327@2|Bacteria,1RE7V@1224|Proteobacteria,1S3P9@1236|Gammaproteobacteria 1236|Gammaproteobacteria K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes nrdR GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005524,GO:0006355,GO:0008144,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - ko:K07738 - - - - ko00000,ko03000 - - - ATP-cone QTD1_k127_1361836_9 1123257.AUFV01000007_gene55 1.324e-63 224.0 COG1171@1|root,COG1171@2|Bacteria,1MVWJ@1224|Proteobacteria,1RPGU@1236|Gammaproteobacteria,1X2XV@135614|Xanthomonadales 135614|Xanthomonadales E dehydratase ilvA - 4.3.1.19 ko:K01754 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230 M00570 R00220,R00996 RC00418,RC02600 ko00000,ko00001,ko00002,ko01000 - - - PALP QTD1_k127_1361836_0 1238182.C882_4055 5.493e-180 573.0 COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,2TQQ7@28211|Alphaproteobacteria,2JQ5R@204441|Rhodospirillales 204441|Rhodospirillales I Belongs to the thiolase family - - - - - - - - - - - - Thiolase_C,Thiolase_N QTD1_k127_1361836_13 1254432.SCE1572_19585 4.395e-46 175.0 COG1280@1|root,COG1280@2|Bacteria,1R551@1224|Proteobacteria,43B5C@68525|delta/epsilon subdivisions,2X6J0@28221|Deltaproteobacteria,2Z2MK@29|Myxococcales 28221|Deltaproteobacteria E LysE type translocator - - - - - - - - - - - - LysE QTD1_k127_1361836_6 448385.sce3223 9.022e-105 370.0 COG1167@1|root,COG1167@2|Bacteria,1MV6F@1224|Proteobacteria,43ADQ@68525|delta/epsilon subdivisions,2X5TK@28221|Deltaproteobacteria 28221|Deltaproteobacteria K helix_turn_helix gluconate operon transcriptional repressor - - - ko:K00375 - - - - ko00000,ko03000 - - - Aminotran_1_2,GntR QTD1_k127_1361836_11 1304275.C41B8_09876 1.068e-53 195.0 COG0705@1|root,COG0705@2|Bacteria,1RD88@1224|Proteobacteria,1S5NF@1236|Gammaproteobacteria 1236|Gammaproteobacteria S membrane protein (homolog of Drosophila rhomboid) - - - - - - - - - - - - Rhomboid QTD1_k127_1361836_4 1123073.KB899242_gene1478 1.368e-113 374.0 COG1131@1|root,COG1131@2|Bacteria,1MUX3@1224|Proteobacteria,1RMM4@1236|Gammaproteobacteria,1X3JY@135614|Xanthomonadales 135614|Xanthomonadales V ABC-type multidrug transport system, ATPase component - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran QTD1_k127_1361836_5 1123073.KB899242_gene1477 5.871e-107 359.0 COG1277@1|root,COG1277@2|Bacteria,1NZZ9@1224|Proteobacteria,1RP6C@1236|Gammaproteobacteria,1X35D@135614|Xanthomonadales 135614|Xanthomonadales S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_2 QTD1_k127_1361836_1 1123073.KB899242_gene1476 2.365e-176 573.0 COG3225@1|root,COG3225@2|Bacteria,1MY63@1224|Proteobacteria,1RP5E@1236|Gammaproteobacteria,1X4RC@135614|Xanthomonadales 135614|Xanthomonadales N transport system involved in gliding motility, auxiliary component - - - - - - - - - - - - ABC_transp_aux QTD1_k127_1361836_15 243233.MCA1564 3.409e-28 131.0 2DM5E@1|root,31SVN@2|Bacteria,1MYKR@1224|Proteobacteria,1SF2N@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Domain of unknown function (DUF4340) - - - - - - - - - - - - DUF4340 QTD1_k127_1361836_7 1089545.KB913037_gene6024 4.56e-71 248.0 COG0346@1|root,COG0346@2|Bacteria,2IPGW@201174|Actinobacteria 201174|Actinobacteria E PFAM Glyoxalase bleomycin resistance protein dioxygenase - - 5.1.99.1 ko:K05606 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00373,M00375,M00376,M00741 R02765,R09979 RC00780,RC02739 ko00000,ko00001,ko00002,ko01000 - - - Glyoxalase QTD1_k127_1361836_16 667632.KB890220_gene2840 1.984e-05 53.0 COG3861@1|root,COG3861@2|Bacteria,1MWBU@1224|Proteobacteria,2VR9U@28216|Betaproteobacteria,1K442@119060|Burkholderiaceae 28216|Betaproteobacteria S electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - - - - - - - - - - - QTD1_k127_1361836_10 666685.R2APBS1_3144 1.926e-57 210.0 2AMY6@1|root,31CV7@2|Bacteria,1P36D@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - QTD1_k127_1361836_14 414684.RC1_1021 4.798e-36 141.0 COG3791@1|root,COG3791@2|Bacteria,1N6S5@1224|Proteobacteria,2UG0P@28211|Alphaproteobacteria,2JT7N@204441|Rhodospirillales 204441|Rhodospirillales S Glutathione-dependent formaldehyde-activating enzyme - - - - - - - - - - - - GFA QTD1_k127_1361836_12 579405.Dd703_3555 4.922e-49 194.0 COG0795@1|root,COG0795@2|Bacteria,1MVW3@1224|Proteobacteria,1RM8H@1236|Gammaproteobacteria,2JD9H@204037|Dickeya 1236|Gammaproteobacteria S PFAM permease YjgP YjgQ family protein lptG GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015920,GO:0016020,GO:0016021,GO:0031224,GO:0032991,GO:0033036,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - ko:K11720 ko02010,map02010 M00320 - - ko00000,ko00001,ko00002,ko02000 1.B.42.1 - iSSON_1240.SSON_4447 YjgP_YjgQ QTD1_k127_1361836_8 1122604.JONR01000001_gene1930 6.334e-68 244.0 COG0795@1|root,COG0795@2|Bacteria,1MUF2@1224|Proteobacteria,1RMN5@1236|Gammaproteobacteria,1X46N@135614|Xanthomonadales 135614|Xanthomonadales S permease - - - ko:K07091 ko02010,map02010 M00320 - - ko00000,ko00001,ko00002,ko02000 1.B.42.1 - - YjgP_YjgQ QTD1_k127_1361836_3 765910.MARPU_12485 8.567e-147 479.0 COG0260@1|root,COG0260@2|Bacteria,1MUF9@1224|Proteobacteria,1RNM1@1236|Gammaproteobacteria,1WW8I@135613|Chromatiales 135613|Chromatiales E Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides pepA - 3.4.11.1 ko:K01255 ko00480,ko01100,map00480,map01100 - R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 - - - Peptidase_M17,Peptidase_M17_N QTD1_k127_1361836_2 396588.Tgr7_2144 6.754e-150 479.0 COG0525@1|root,COG0525@2|Bacteria,1MV7B@1224|Proteobacteria,1RNEB@1236|Gammaproteobacteria,1WWJI@135613|Chromatiales 135613|Chromatiales J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner valS - 6.1.1.9 ko:K01873 ko00970,map00970 M00359,M00360 R03665 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,Val_tRNA-synt_C,tRNA-synt_1 QTD1_k127_1366748_1 93220.LV28_07335 7.742e-167 535.0 COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2VI0I@28216|Betaproteobacteria,1K4G7@119060|Burkholderiaceae 28216|Betaproteobacteria IQ PFAM AMP-dependent synthetase and ligase fadD - 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding,AMP-binding_C QTD1_k127_1366748_5 1042375.AFPL01000004_gene611 2.381e-63 228.0 COG2755@1|root,COG2755@2|Bacteria,1RCXZ@1224|Proteobacteria,1S3QU@1236|Gammaproteobacteria,466ZZ@72275|Alteromonadaceae 1236|Gammaproteobacteria E COG2755 Lysophospholipase L1 and related esterases tesA GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 ko:K10804 ko01040,map01040 - - - ko00000,ko00001,ko01000,ko01004 - - iECED1_1282.ECED1_0521,iLF82_1304.LF82_2242,iNRG857_1313.NRG857_02365 Lipase_GDSL_2 QTD1_k127_1366748_2 1384056.N787_02440 9.493e-87 294.0 COG4181@1|root,COG4181@2|Bacteria,1MXG9@1224|Proteobacteria,1RMG1@1236|Gammaproteobacteria,1X623@135614|Xanthomonadales 135614|Xanthomonadales Q ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran QTD1_k127_1366748_0 713586.KB900536_gene921 4.257e-189 625.0 COG3127@1|root,COG3127@2|Bacteria,1MU9R@1224|Proteobacteria,1RM8Y@1236|Gammaproteobacteria,1WX8V@135613|Chromatiales 135613|Chromatiales Q FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX QTD1_k127_1366748_4 1384054.N790_11830 2.023e-85 291.0 COG3279@1|root,COG3279@2|Bacteria,1MUE8@1224|Proteobacteria,1RMJJ@1236|Gammaproteobacteria,1X5A5@135614|Xanthomonadales 135614|Xanthomonadales KT LytTr DNA-binding domain - - - ko:K02477 - - - - ko00000,ko02022 - - - LytTR,Response_reg QTD1_k127_1366748_3 1517416.IDAT_01225 2.8e-86 300.0 COG2972@1|root,COG2972@2|Bacteria,1MXVQ@1224|Proteobacteria,1RQDA@1236|Gammaproteobacteria,2QF81@267893|Idiomarinaceae 1236|Gammaproteobacteria T Histidine kinase - - 2.7.13.3 ko:K08082 ko02020,map02020 M00493 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HATPase_c,His_kinase QTD1_k127_1366748_6 1434929.X946_2086 9.098e-10 70.0 COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2VJMN@28216|Betaproteobacteria,1K063@119060|Burkholderiaceae 28216|Betaproteobacteria T domain protein - - - ko:K03320 - - - - ko00000,ko02000 1.A.11 - - DUF2222,EAL,GGDEF,HAMP,PAS,PAS_3,PAS_4,PAS_9 QTD1_k127_1373836_6 314278.NB231_10368 2.366e-14 77.0 2E600@1|root,330PC@2|Bacteria,1N9V9@1224|Proteobacteria,1SHAU@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_1373836_5 1035191.HMPREF0185_02274 3.812e-25 121.0 COG2146@1|root,COG2146@2|Bacteria,1N72F@1224|Proteobacteria,2UCUP@28211|Alphaproteobacteria,2KH1J@204458|Caulobacterales 204458|Caulobacterales P Rieske 2Fe-2S - - - - - - - - - - - - Rieske QTD1_k127_1373836_1 1131269.AQVV01000018_gene1913 2.51e-87 310.0 COG2223@1|root,COG2223@2|Bacteria 2|Bacteria P nitrite transmembrane transporter activity ampG GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - ko:K08218,ko:K08223 ko01501,map01501 M00628 - - ko00000,ko00001,ko00002,ko02000 2.A.1.25,2.A.1.35 - iAPECO1_1312.APECO1_1578,iECOK1_1307.ECOK1_0413,iECS88_1305.ECS88_0429,iLF82_1304.LF82_0088,iNRG857_1313.NRG857_02040,iPC815.YPO3162,iUMN146_1321.UM146_15195,iUTI89_1310.UTI89_C0457 MFS_1 QTD1_k127_1373836_0 396588.Tgr7_0109 1.913e-101 345.0 COG0708@1|root,COG0708@2|Bacteria,1MVII@1224|Proteobacteria,1RN4H@1236|Gammaproteobacteria 1236|Gammaproteobacteria L Exodeoxyribonuclease III crc - 3.1.11.2 ko:K01142 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Exo_endo_phos QTD1_k127_1373836_3 1028307.EAE_06410 3.006e-78 267.0 COG0461@1|root,COG0461@2|Bacteria,1MW6F@1224|Proteobacteria,1RQYG@1236|Gammaproteobacteria,3X1WJ@547|Enterobacter 1236|Gammaproteobacteria F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) pyrE GO:0000287,GO:0003674,GO:0003824,GO:0004588,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.10 ko:K00762 ko00240,ko01100,map00240,map01100 M00051 R01870 RC00611 ko00000,ko00001,ko00002,ko01000 - - iAPECO1_1312.APECO1_2819,iECIAI39_1322.ECIAI39_4161,iEcSMS35_1347.EcSMS35_3977,iUTI89_1310.UTI89_C4186 Pribosyltran QTD1_k127_1373836_7 1163617.SCD_n00093 4.188e-13 79.0 2DPC5@1|root,331GN@2|Bacteria,1NCRC@1224|Proteobacteria,2VVUT@28216|Betaproteobacteria 28216|Betaproteobacteria S Domain of unknown function (DUF4124) - - - - - - - - - - - - DUF4124 QTD1_k127_1373836_4 1056512.D515_01651 1.112e-67 234.0 COG0756@1|root,COG0756@2|Bacteria,1RA7P@1224|Proteobacteria,1S233@1236|Gammaproteobacteria,1XWXN@135623|Vibrionales 135623|Vibrionales F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA dut - 3.6.1.23 ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 M00053 R02100,R11896 RC00002 ko00000,ko00001,ko00002,ko01000,ko03400 - - - dUTPase QTD1_k127_1373836_2 519989.ECTPHS_08708 2.725e-83 285.0 COG0452@1|root,COG0452@2|Bacteria,1MVQP@1224|Proteobacteria,1RMKQ@1236|Gammaproteobacteria,1WXCF@135613|Chromatiales 135613|Chromatiales H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine - - 4.1.1.36,6.3.2.5 ko:K13038 ko00770,ko01100,map00770,map01100 M00120 R03269,R04231 RC00064,RC00090,RC00822 ko00000,ko00001,ko00002,ko01000 - - - DFP,Flavoprotein QTD1_k127_1384151_4 682795.AciX8_1913 9.591e-94 339.0 COG4934@1|root,COG4934@2|Bacteria,3Y3PE@57723|Acidobacteria,2JIE7@204432|Acidobacteriia 204432|Acidobacteriia O PFAM Peptidase S53, propeptide - - - - - - - - - - - - Big_3_5,Pro-kuma_activ QTD1_k127_1384151_7 697282.Mettu_3360 1.633e-55 203.0 COG3118@1|root,COG3118@2|Bacteria,1RHUA@1224|Proteobacteria,1S64W@1236|Gammaproteobacteria,1XF4W@135618|Methylococcales 135618|Methylococcales O Thioredoxin - - 1.8.1.8 ko:K03672 - - - - ko00000,ko01000,ko03110 - - - Thioredoxin QTD1_k127_1384151_6 1123073.KB899242_gene985 9.669e-71 247.0 COG0681@1|root,COG0681@2|Bacteria,1R7Z4@1224|Proteobacteria,1RX6N@1236|Gammaproteobacteria,1X7HQ@135614|Xanthomonadales 135614|Xanthomonadales U Signal peptidase, peptidase S26 - - - - - - - - - - - - Peptidase_S24,Peptidase_S26 QTD1_k127_1384151_9 314230.DSM3645_12896 2.089e-41 160.0 COG3797@1|root,COG3797@2|Bacteria,2J0UW@203682|Planctomycetes 203682|Planctomycetes S Protein of unknown function (DUF1697) - - - - - - - - - - - - DUF1697 QTD1_k127_1384151_0 713586.KB900536_gene1496 4.885e-258 801.0 COG3278@1|root,COG3278@2|Bacteria,1MU18@1224|Proteobacteria,1RM7I@1236|Gammaproteobacteria,1WXK9@135613|Chromatiales 135613|Chromatiales C Belongs to the heme-copper respiratory oxidase family - - 1.9.3.1 ko:K00404 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 - - ko00000,ko00001,ko00002,ko01000 3.D.4.3 - - COX1 QTD1_k127_1384151_5 489653.NLA_5470 3.961e-80 273.0 COG2993@1|root,COG2993@2|Bacteria,1MXEY@1224|Proteobacteria,2VIJ2@28216|Betaproteobacteria,2KQ51@206351|Neisseriales 206351|Neisseriales C subunit II ccoO - - ko:K00405 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 - - ko00000,ko00001,ko00002 3.D.4.3 - - FixO QTD1_k127_1384151_12 583345.Mmol_0543 1.728e-07 54.0 COG4736@1|root,COG4736@2|Bacteria 2|Bacteria O Cbb3-type cytochrome oxidase ccoQ - - ko:K00407 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 - - ko00000,ko00001,ko00002 3.D.4.3 - - FixQ QTD1_k127_1384151_3 396588.Tgr7_0634 1.814e-95 328.0 COG2010@1|root,COG2010@2|Bacteria,1MUCW@1224|Proteobacteria,1RPYJ@1236|Gammaproteobacteria,1WWRW@135613|Chromatiales 135613|Chromatiales C C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex - - - ko:K00406 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 - - ko00000,ko00001,ko00002 3.D.4.3 - - Cytochrome_CBB3,FixP_N QTD1_k127_1384151_11 1118235.CAJH01000014_gene899 1.261e-13 74.0 2EFX9@1|root,339PI@2|Bacteria,1NI0D@1224|Proteobacteria,1SGKH@1236|Gammaproteobacteria,1X8GR@135614|Xanthomonadales 135614|Xanthomonadales - - - - - - - - - - - - - - - QTD1_k127_1384151_2 187272.Mlg_1877 1.54e-178 570.0 COG0348@1|root,COG0348@2|Bacteria,1MVFY@1224|Proteobacteria,1RMDI@1236|Gammaproteobacteria,1WWVW@135613|Chromatiales 135613|Chromatiales C TIGRFAM cytochrome c oxidase accessory protein - - - - - - - - - - - - Fer4_18,Fer4_5,FixG_C QTD1_k127_1384151_13 1265313.HRUBRA_02082 4.28e-05 51.0 COG3198@1|root,COG3198@2|Bacteria,1N75J@1224|Proteobacteria,1SC87@1236|Gammaproteobacteria,1J72I@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria S FixH ccoH - - ko:K09926 - - - - ko00000 - - - FixH QTD1_k127_1384151_1 187272.Mlg_1875 4.495e-196 638.0 COG2217@1|root,COG2608@1|root,COG2217@2|Bacteria,COG2608@2|Bacteria,1MU08@1224|Proteobacteria,1RN2C@1236|Gammaproteobacteria,1WXM6@135613|Chromatiales 135613|Chromatiales P ATPase, P-type (transporting), HAD superfamily, subfamily IC - - 3.6.3.4 ko:K01533 - - R00086 RC00002 ko00000,ko01000 3.A.3.5 - - ATPase-cat_bd,E1-E2_ATPase,HMA,Hydrolase QTD1_k127_1384151_10 1415780.JPOG01000001_gene2436 1.457e-14 74.0 COG3197@1|root,COG3197@2|Bacteria,1QSIT@1224|Proteobacteria,1RW0B@1236|Gammaproteobacteria,1X8QU@135614|Xanthomonadales 135614|Xanthomonadales P Cytochrome oxidase maturation protein - - - - - - - - - - - - FixS QTD1_k127_1384151_8 204669.Acid345_2653 3.736e-47 174.0 COG1956@1|root,COG1956@2|Bacteria,3Y4UF@57723|Acidobacteria,2JJHH@204432|Acidobacteriia 204432|Acidobacteriia T Domain present in phytochromes and cGMP-specific phosphodiesterases. - - 1.8.4.14 ko:K08968 ko00270,map00270 - R02025 RC00639 ko00000,ko00001,ko01000 - - - GAF_2 QTD1_k127_1440727_3 1122135.KB893134_gene3133 2.694e-131 430.0 COG0404@1|root,COG0404@2|Bacteria,1R3WG@1224|Proteobacteria,2U0M4@28211|Alphaproteobacteria 28211|Alphaproteobacteria E Belongs to the GcvT family - - 2.1.2.10 ko:K00605 ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200 M00532 R01221,R02300,R04125 RC00022,RC00069,RC00183,RC02834 ko00000,ko00001,ko00002,ko01000 - - - GCV_T,GCV_T_C QTD1_k127_1440727_2 1297569.MESS2_1480041 1.249e-151 495.0 COG1233@1|root,COG1233@2|Bacteria,1MV2R@1224|Proteobacteria,2TSR0@28211|Alphaproteobacteria,43GY1@69277|Phyllobacteriaceae 28211|Alphaproteobacteria Q Flavin containing amine oxidoreductase - - - - - - - - - - - - Amino_oxidase,NAD_binding_8 QTD1_k127_1440727_0 1192868.CAIU01000019_gene2652 1.419e-240 755.0 COG1233@1|root,COG1233@2|Bacteria,1MV2R@1224|Proteobacteria,2TSR0@28211|Alphaproteobacteria,43J3W@69277|Phyllobacteriaceae 28211|Alphaproteobacteria Q COG1233 Phytoene dehydrogenase and related - - - - - - - - - - - - Amino_oxidase,NAD_binding_8 QTD1_k127_1440727_1 1122135.KB893134_gene3130 3.771e-199 633.0 COG0001@1|root,COG0001@2|Bacteria,1MUY5@1224|Proteobacteria,2TU8Q@28211|Alphaproteobacteria 28211|Alphaproteobacteria H Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - 5.4.3.8 ko:K01845 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R02272 RC00677 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_3,CTP_transf_3 QTD1_k127_1454146_7 1038858.AXBA01000011_gene1464 8.255e-51 184.0 COG0372@1|root,COG0372@2|Bacteria,1MUII@1224|Proteobacteria,2TSDI@28211|Alphaproteobacteria 28211|Alphaproteobacteria C citrate synthase - - 2.3.3.1 ko:K01647 ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00740 R00351 RC00004,RC00067 br01601,ko00000,ko00001,ko00002,ko01000 - - - Citrate_synt QTD1_k127_1454146_4 1038858.AXBA01000011_gene1463 1.646e-137 455.0 COG1804@1|root,COG1804@2|Bacteria,1P68A@1224|Proteobacteria,2TR4B@28211|Alphaproteobacteria 28211|Alphaproteobacteria C carnitine dehydratase - - - - - - - - - - - - CoA_transf_3 QTD1_k127_1454146_1 1028801.RG1141_CH01030 2.13e-168 538.0 COG0620@1|root,COG0620@2|Bacteria,1MUI9@1224|Proteobacteria,2TTWK@28211|Alphaproteobacteria,4BDWB@82115|Rhizobiaceae 28211|Alphaproteobacteria E Cobalamin-independent synthase, Catalytic domain metE - 2.1.1.14,4.4.1.23 ko:K00549,ko:K22363 ko00270,ko00450,ko00625,ko01100,ko01110,ko01230,map00270,map00450,map00625,map01100,map01110,map01230 M00017 R04405,R09365,R11897,R11899 RC00035,RC00113,RC01241 ko00000,ko00001,ko00002,ko01000 - - - Meth_synt_2 QTD1_k127_1454146_0 1122137.AQXF01000004_gene1584 7.119e-215 699.0 COG4774@1|root,COG4774@2|Bacteria,1NMCN@1224|Proteobacteria,2U1C8@28211|Alphaproteobacteria 28211|Alphaproteobacteria P TonB-dependent receptor - - - - - - - - - - - - Plug,TonB_dep_Rec QTD1_k127_1454146_6 1449353.JQMQ01000005_gene499 4.351e-78 265.0 COG0346@1|root,COG0346@2|Bacteria,2HKRN@201174|Actinobacteria,2NHGV@228398|Streptacidiphilus 201174|Actinobacteria E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - - - - - - - - - - Glyoxalase QTD1_k127_1454146_5 543728.Vapar_5652 3.018e-113 379.0 COG3485@1|root,COG3485@2|Bacteria,1MX7W@1224|Proteobacteria,2VM31@28216|Betaproteobacteria,4AFA6@80864|Comamonadaceae 28216|Betaproteobacteria Q PFAM intradiol ring-cleavage dioxygenase - - 1.13.11.1,1.13.11.37 ko:K03381,ko:K04098,ko:K15253 ko00361,ko00362,ko00364,ko00623,ko01100,ko01120,ko01220,map00361,map00362,map00364,map00623,map01100,map01120,map01220 M00568 R00817,R03891,R04061,R04258,R05299,R05407,R05409,R06833,R06839,R08114,R08115,R09134 RC00388,RC00535,RC01016,RC01366 ko00000,ko00001,ko00002,ko01000 - - - Dioxygenase_C,Dioxygenase_N QTD1_k127_1454146_2 247634.GPB2148_156 2.042e-150 495.0 COG0620@1|root,COG0620@2|Bacteria,1QJ82@1224|Proteobacteria,1TH64@1236|Gammaproteobacteria,1J9IH@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria E E COG0620 Methionine synthase II (cobalamin-independent) - - - - - - - - - - - - Meth_synt_2 QTD1_k127_1454146_3 991905.SL003B_2672 6.169e-139 456.0 COG0742@1|root,COG0742@2|Bacteria,1MW6A@1224|Proteobacteria,2TQNI@28211|Alphaproteobacteria 28211|Alphaproteobacteria L ribosomal rna small subunit methyltransferase MA20_07810 - - - - - - - - - - - - QTD1_k127_1474923_14 568703.LGG_02505 6.563e-16 77.0 2DPNJ@1|root,332SC@2|Bacteria,1VEK7@1239|Firmicutes,4II74@91061|Bacilli,3FAQA@33958|Lactobacillaceae 91061|Bacilli - - - - - - - - - - - - - - - QTD1_k127_1474923_12 941770.GL622179_gene415 3.362e-19 88.0 2DN97@1|root,32W7A@2|Bacteria,1VANB@1239|Firmicutes,4HYZ4@91061|Bacilli,3F78H@33958|Lactobacillaceae 91061|Bacilli - - - - - - - - - - - - - - - QTD1_k127_1474923_8 525367.HMPREF0556_11507 3.826e-31 124.0 2DPM9@1|root,332MQ@2|Bacteria,1VGFB@1239|Firmicutes 1239|Firmicutes - - - - - - - - - - - - - - - QTD1_k127_1474923_13 198214.SF2650 2.376e-16 81.0 2DTVF@1|root,33MUB@2|Bacteria,1NIN2@1224|Proteobacteria,1SHHE@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_1474923_1 187272.Mlg_0438 1.398e-163 524.0 COG0162@1|root,COG0162@2|Bacteria,1MVUQ@1224|Proteobacteria,1RPKC@1236|Gammaproteobacteria,1WX6G@135613|Chromatiales 135613|Chromatiales J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) tyrS - 6.1.1.1 ko:K01866 ko00970,map00970 M00359,M00360 R02918 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - S4,tRNA-synt_1b QTD1_k127_1474923_3 1123261.AXDW01000002_gene1513 4.21e-101 346.0 COG0739@1|root,COG0739@2|Bacteria,1MVTF@1224|Proteobacteria,1RM7S@1236|Gammaproteobacteria,1X3R2@135614|Xanthomonadales 135614|Xanthomonadales M membrane - - - - - - - - - - - - OapA,Peptidase_M23 QTD1_k127_1474923_0 395493.BegalDRAFT_0038 2.5e-261 825.0 COG0855@1|root,COG0855@2|Bacteria,1MUM3@1224|Proteobacteria,1RNRX@1236|Gammaproteobacteria,45ZT3@72273|Thiotrichales 72273|Thiotrichales P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) ppk - 2.7.4.1 ko:K00937 ko00190,ko03018,map00190,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - PP_kinase,PP_kinase_C,PP_kinase_N QTD1_k127_1474923_2 1177181.T9A_02165 2.419e-146 479.0 COG0248@1|root,COG0248@2|Bacteria,1MV35@1224|Proteobacteria,1RN3V@1236|Gammaproteobacteria,1XHDN@135619|Oceanospirillales 135619|Oceanospirillales FP Belongs to the GppA Ppx family ppx - 3.6.1.11,3.6.1.40 ko:K01524 ko00230,map00230 - R03409 RC00002 ko00000,ko00001,ko01000 - - - HD,Ppx-GppA QTD1_k127_1474923_6 631362.Thi970DRAFT_04205 1.818e-48 175.0 COG0316@1|root,COG0316@2|Bacteria,1RHCW@1224|Proteobacteria,1S675@1236|Gammaproteobacteria,1WYPN@135613|Chromatiales 135613|Chromatiales C Iron--sulfur cluster insertion protein erpA erpA - - ko:K15724 - - - - ko00000 - - - Fe-S_biosyn QTD1_k127_1474923_10 190486.XAC0498 6.272e-30 123.0 COG1664@1|root,COG1664@2|Bacteria,1PDPX@1224|Proteobacteria,1S9XY@1236|Gammaproteobacteria,1X6WV@135614|Xanthomonadales 135614|Xanthomonadales M cell shape determination - - - - - - - - - - - - Bactofilin QTD1_k127_1474923_16 425104.Ssed_1094 1.261e-06 59.0 2DA4I@1|root,32TUN@2|Bacteria,1N0WK@1224|Proteobacteria,1S6HI@1236|Gammaproteobacteria,2Q9B2@267890|Shewanellaceae 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_1474923_5 1049564.TevJSym_bp00050 1.915e-57 205.0 COG1051@1|root,COG1051@2|Bacteria,1QU0T@1224|Proteobacteria,1T1KA@1236|Gammaproteobacteria,1JC0E@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria F Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage nudH GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019222,GO:0019439,GO:0034353,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 - ko:K08311 ko03018,map03018 - R10816 RC00002 ko00000,ko00001,ko01000,ko03019 - - - NUDIX QTD1_k127_1474923_4 305700.B447_15861 9.597e-72 254.0 COG0609@1|root,COG0609@2|Bacteria,1MV9W@1224|Proteobacteria,2VK1S@28216|Betaproteobacteria,2KVFR@206389|Rhodocyclales 206389|Rhodocyclales P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily - - - ko:K02015 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14 - - FecCD QTD1_k127_1474923_17 1280948.HY36_15925 3.689e-05 53.0 COG1595@1|root,COG1595@2|Bacteria,1RGRX@1224|Proteobacteria,2U8W5@28211|Alphaproteobacteria 28211|Alphaproteobacteria K DNA-templated transcription, initiation - - - ko:K03088 - - - - ko00000,ko03021 - - - - QTD1_k127_1474923_11 204669.Acid345_4399 2.516e-29 124.0 2DKN8@1|root,32UFB@2|Bacteria,3Y55I@57723|Acidobacteria,2JJU7@204432|Acidobacteriia 204432|Acidobacteriia S Domain of unknown function (DUF4252) - - - - - - - - - - - - DUF4252 QTD1_k127_1474923_7 204669.Acid345_4397 1.863e-32 132.0 COG1595@1|root,COG1595@2|Bacteria,3Y5BF@57723|Acidobacteria,2JJZZ@204432|Acidobacteriia 204432|Acidobacteriia K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 QTD1_k127_1474923_9 1502852.FG94_01361 4.743e-31 126.0 COG2199@1|root,COG3159@1|root,COG3159@2|Bacteria,COG3706@2|Bacteria,1R8F2@1224|Proteobacteria,2VJGD@28216|Betaproteobacteria,472P5@75682|Oxalobacteraceae 28216|Betaproteobacteria T Protein of unknown function, DUF484 - - - - - - - - - - - - DUF484,GGDEF QTD1_k127_1492581_2 342113.DM82_4103 7.747e-108 356.0 COG1113@1|root,COG1113@2|Bacteria,1MUPS@1224|Proteobacteria,2VJP4@28216|Betaproteobacteria,1K60V@119060|Burkholderiaceae 28216|Betaproteobacteria E amino acid - - - - - - - - - - - - AA_permease QTD1_k127_1492581_3 1235457.C404_23525 8.938e-60 211.0 COG2764@1|root,COG2764@2|Bacteria,1RF5T@1224|Proteobacteria,2VTA0@28216|Betaproteobacteria,1KHTX@119060|Burkholderiaceae 28216|Betaproteobacteria S glyoxalase bleomycin resistance protein dioxygenase - - - ko:K04750 - - - - ko00000 - - - Glyoxalase QTD1_k127_1492581_0 1123073.KB899241_gene2665 1.493e-261 811.0 COG1696@1|root,COG1696@2|Bacteria,1MUXN@1224|Proteobacteria,1RQ1A@1236|Gammaproteobacteria,1X64P@135614|Xanthomonadales 135614|Xanthomonadales M MBOAT, membrane-bound O-acyltransferase family - - - - - - - - - - - - MBOAT QTD1_k127_1492581_1 1123073.KB899241_gene2664 1.468e-131 430.0 2BSEF@1|root,32MGE@2|Bacteria,1N9VN@1224|Proteobacteria,1SG8G@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_1492581_5 1297863.APJF01000010_gene3112 1.507e-09 63.0 COG2135@1|root,COG2135@2|Bacteria,1RER4@1224|Proteobacteria,2U0W2@28211|Alphaproteobacteria,3JV7R@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria S Belongs to the SOS response-associated peptidase family MA20_42060 - - - - - - - - - - - SRAP QTD1_k127_1492581_4 986075.CathTA2_0103 5.907e-23 106.0 COG2135@1|root,COG2135@2|Bacteria,1TRRV@1239|Firmicutes,4HDUN@91061|Bacilli 91061|Bacilli S Belongs to the SOS response-associated peptidase family yoqW - - - - - - - - - - - SRAP QTD1_k127_1506914_1 266117.Rxyl_2529 1.662e-219 707.0 COG2902@1|root,COG2902@2|Bacteria,2GK0C@201174|Actinobacteria,4CPJ1@84995|Rubrobacteria 84995|Rubrobacteria E Bacterial NAD-glutamate dehydrogenase - - 1.4.1.2 ko:K15371 ko00220,ko00250,ko00430,ko00910,ko01100,map00220,map00250,map00430,map00910,map01100 - R00243 RC00006,RC02799 ko00000,ko00001,ko01000 - - - Bac_GDH QTD1_k127_1506914_2 1380394.JADL01000012_gene1023 7.087e-158 541.0 COG3185@1|root,COG3185@2|Bacteria,1MUVZ@1224|Proteobacteria,2TRCC@28211|Alphaproteobacteria,2JQJ4@204441|Rhodospirillales 204441|Rhodospirillales E Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal - - 1.13.11.27 ko:K00457 ko00130,ko00350,ko00360,ko01100,map00130,map00350,map00360,map01100 M00044 R01372,R02521 RC00505,RC00738 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Glyoxalase,Glyoxalase_5 QTD1_k127_1506914_5 1198452.Jab_2c14590 5.112e-42 166.0 2910Q@1|root,2ZNNC@2|Bacteria,1PCP3@1224|Proteobacteria,2W2XM@28216|Betaproteobacteria 28216|Betaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_1506914_3 187272.Mlg_0334 3.696e-110 368.0 COG1485@1|root,COG1485@2|Bacteria,1MUUW@1224|Proteobacteria,1RMTJ@1236|Gammaproteobacteria,1WW2P@135613|Chromatiales 135613|Chromatiales D Reduces the stability of FtsZ polymers in the presence of ATP zapE - - ko:K06916 - - - - ko00000,ko03036 - - - AFG1_ATPase QTD1_k127_1506914_0 472759.Nhal_2509 2.355e-268 844.0 COG0365@1|root,COG0365@2|Bacteria,1MUX7@1224|Proteobacteria,1RPGT@1236|Gammaproteobacteria,1WW8N@135613|Chromatiales 135613|Chromatiales I Acetoacetyl-CoA synthase - - 6.2.1.16 ko:K01907 ko00280,ko00650,map00280,map00650 - R01357 RC00004,RC00014 ko00000,ko00001,ko01000,ko01004 - - - ACAS_N,AMP-binding,AMP-binding_C QTD1_k127_1506914_4 913325.N799_04070 1.537e-54 192.0 COG0644@1|root,COG2440@1|root,COG0644@2|Bacteria,COG2440@2|Bacteria,1MVU6@1224|Proteobacteria,1RNY5@1236|Gammaproteobacteria,1X31X@135614|Xanthomonadales 135614|Xanthomonadales C Electron transfer flavoprotein-ubiquinone oxidoreductase etf-QO - 1.5.5.1 ko:K00311 - - - - ko00000,ko01000 - - - ETF_QO,FAD_binding_2,NAD_binding_8,Thi4 QTD1_k127_153114_1 1267533.KB906739_gene2494 1.284e-52 209.0 COG3533@1|root,COG3533@2|Bacteria,3Y6PC@57723|Acidobacteria,2JKG6@204432|Acidobacteriia 204432|Acidobacteriia S Beta-L-arabinofuranosidase, GH127 - - - ko:K09955 - - - - ko00000 - - - Glyco_hydro_127 QTD1_k127_153114_0 1090320.KB900605_gene1657 5.86e-185 604.0 28MSW@1|root,2ZB15@2|Bacteria,1PSQ1@1224|Proteobacteria,2UPF1@28211|Alphaproteobacteria,2JZWK@204457|Sphingomonadales 204457|Sphingomonadales - - - - - - - - - - - - - - - QTD1_k127_1537790_0 1380394.JADL01000016_gene458 8.232e-221 694.0 COG0466@1|root,COG0466@2|Bacteria,1MUV2@1224|Proteobacteria,2TR4E@28211|Alphaproteobacteria,2JQC9@204441|Rhodospirillales 204441|Rhodospirillales O ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner - - - - - - - - - - - - AAA,LON_substr_bdg,Lon_C QTD1_k127_1537790_2 1116472.MGMO_58c00190 1.731e-74 254.0 COG1225@1|root,COG1225@2|Bacteria,1RHSM@1224|Proteobacteria,1RQ8S@1236|Gammaproteobacteria,1XE7X@135618|Methylococcales 135618|Methylococcales O Redoxin - - - - - - - - - - - - AhpC-TSA QTD1_k127_1537790_3 243233.MCA2761 1.403e-69 240.0 COG1335@1|root,COG1335@2|Bacteria,1MUGW@1224|Proteobacteria,1RZBF@1236|Gammaproteobacteria,1XF7J@135618|Methylococcales 135618|Methylococcales Q Isochorismatase family - - 3.5.1.19 ko:K08281 ko00760,ko01100,map00760,map01100 - R01268 RC00100 ko00000,ko00001,ko01000 - - - Isochorismatase QTD1_k127_1537790_6 1191460.F959_00013 1.106e-24 113.0 2B07T@1|root,31SIM@2|Bacteria,1QQ3R@1224|Proteobacteria,1TNX2@1236|Gammaproteobacteria,3NRH7@468|Moraxellaceae 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_1537790_4 224911.27352916 1.834e-63 225.0 COG0778@1|root,COG0778@2|Bacteria,1PEMB@1224|Proteobacteria,2V61J@28211|Alphaproteobacteria,3JYA5@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria C Nitroreductase family - - - - - - - - - - - - Nitroreductase QTD1_k127_1537790_7 1122197.ATWI01000011_gene423 2.68e-23 105.0 COG0575@1|root,COG0575@2|Bacteria,1N4I3@1224|Proteobacteria,1SASF@1236|Gammaproteobacteria 1236|Gammaproteobacteria I COG0575 CDP-diglyceride synthetase - - 2.7.7.67 ko:K19664 ko00564,map00564 - R08966 RC00002 ko00000,ko00001,ko01000 - - - CarS-like QTD1_k127_1537790_1 335543.Sfum_1461 7.734e-87 298.0 COG4786@1|root,COG4786@2|Bacteria,1MZXB@1224|Proteobacteria,42MTK@68525|delta/epsilon subdivisions,2WM8U@28221|Deltaproteobacteria,2MQWV@213462|Syntrophobacterales 28221|Deltaproteobacteria N Protein of unknown function (DUF2950) - - - - - - - - - - - - DUF2950 QTD1_k127_1537790_5 335543.Sfum_2323 1.428e-55 212.0 COG3064@1|root,COG3064@2|Bacteria,1MXPS@1224|Proteobacteria,42PA3@68525|delta/epsilon subdivisions,2WM6X@28221|Deltaproteobacteria 28221|Deltaproteobacteria M Protein of unknown function (DUF3300) - - - - - - - - - - - - DUF3300 QTD1_k127_1537790_8 240015.ACP_2822 1.473e-16 85.0 COG4934@1|root,COG4934@2|Bacteria,3Y3PE@57723|Acidobacteria,2JIE7@204432|Acidobacteriia 204432|Acidobacteriia O PFAM Peptidase S53, propeptide - - - - - - - - - - - - Big_3_5,Pro-kuma_activ QTD1_k127_1544965_5 269800.Tfu_0258 1.677e-45 177.0 COG0708@1|root,COG0708@2|Bacteria,2GKEW@201174|Actinobacteria,4EGSA@85012|Streptosporangiales 201174|Actinobacteria L Endonuclease/Exonuclease/phosphatase family xthA - 3.1.11.2 ko:K01142 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Exo_endo_phos QTD1_k127_1544965_6 1267535.KB906767_gene1065 2.16e-39 150.0 COG1970@1|root,COG1970@2|Bacteria,3Y58F@57723|Acidobacteria,2JJRP@204432|Acidobacteriia 204432|Acidobacteriia M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell mscL - - ko:K03282 - - - - ko00000,ko02000 1.A.22.1 - - MscL QTD1_k127_1544965_1 1384056.N787_06465 8.146e-97 332.0 COG1404@1|root,COG1404@2|Bacteria,1MU3S@1224|Proteobacteria,1RQ7X@1236|Gammaproteobacteria,1X4WC@135614|Xanthomonadales 135614|Xanthomonadales O Subtilase family - - - - - - - - - - - - Peptidase_S8 QTD1_k127_1544965_4 1384056.N787_06460 4.068e-48 177.0 COG1595@1|root,COG1595@2|Bacteria,1MZMC@1224|Proteobacteria,1S3GT@1236|Gammaproteobacteria,1XC77@135614|Xanthomonadales 135614|Xanthomonadales K Sigma-70, region 4 - - - - - - - - - - - - Sigma70_r2,Sigma70_r4_2 QTD1_k127_1544965_3 1502852.FG94_02794 3.858e-48 181.0 COG5662@1|root,COG5662@2|Bacteria,1PX19@1224|Proteobacteria,2WCJ6@28216|Betaproteobacteria,477RB@75682|Oxalobacteraceae 28216|Betaproteobacteria K AntiSigma factor - - - - - - - - - - - - - QTD1_k127_1544965_0 331869.BAL199_01064 1.186e-124 407.0 KOG2165@1|root,2Z911@2|Bacteria,1N8JM@1224|Proteobacteria,2UQZ0@28211|Alphaproteobacteria 28211|Alphaproteobacteria S ubiquitin protein ligase binding - - - - - - - - - - - - - QTD1_k127_1544965_2 663610.JQKO01000011_gene3320 1.812e-89 299.0 COG2759@1|root,COG2759@2|Bacteria,1MUR8@1224|Proteobacteria,2TRMM@28211|Alphaproteobacteria,3NASQ@45404|Beijerinckiaceae 28211|Alphaproteobacteria F formate-tetrahydrofolate ligase activity fhs - 6.3.4.3 ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R00943 RC00026,RC00111 ko00000,ko00001,ko00002,ko01000 - - - FTHFS QTD1_k127_1555860_0 1187851.A33M_1846 2.264e-99 326.0 COG3957@1|root,COG3957@2|Bacteria,1MVSE@1224|Proteobacteria,2TU2E@28211|Alphaproteobacteria 28211|Alphaproteobacteria G D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase xfp - 4.1.2.22,4.1.2.9 ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 - R00761,R01621 RC00032,RC00226 ko00000,ko00001,ko01000 - - - XFP,XFP_C,XFP_N QTD1_k127_1555860_3 399739.Pmen_3260 2.037e-32 139.0 COG0589@1|root,COG0589@2|Bacteria,1MVZS@1224|Proteobacteria,1RPAE@1236|Gammaproteobacteria,1YF68@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria T Universal stress protein family ydaA - - ko:K14055 - - - - ko00000 - - - Usp QTD1_k127_1555860_2 1122604.JONR01000003_gene1497 6.841e-52 193.0 COG2863@1|root,COG2863@2|Bacteria,1RM00@1224|Proteobacteria,1SQEF@1236|Gammaproteobacteria 1236|Gammaproteobacteria C Cytochrome c - - - - - - - - - - - - Cytochrom_C QTD1_k127_1555860_1 267608.RSc0196 3.294e-99 339.0 28JQB@1|root,2Z9G8@2|Bacteria,1QCH9@1224|Proteobacteria,2VJJF@28216|Betaproteobacteria,1K17Y@119060|Burkholderiaceae 28216|Betaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_1556688_5 1415780.JPOG01000001_gene1488 2.939e-18 88.0 2ENKU@1|root,33G87@2|Bacteria,1NMH6@1224|Proteobacteria,1SGDI@1236|Gammaproteobacteria,1X7KN@135614|Xanthomonadales 135614|Xanthomonadales - - - - - - - - - - - - - - - QTD1_k127_1556688_3 395493.BegalDRAFT_0733 4.12e-61 220.0 COG0642@1|root,COG0642@2|Bacteria,COG2205@2|Bacteria,1NRP8@1224|Proteobacteria,1SKTW@1236|Gammaproteobacteria,4608A@72273|Thiotrichales 72273|Thiotrichales T Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - 2.7.13.3 ko:K10715 ko02020,ko02024,map02020,map02024 M00517 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - CHASE8,HATPase_c,HisKA,Hpt,Response_reg QTD1_k127_1556688_0 768671.ThimaDRAFT_2445 0.0 1261.0 COG1197@1|root,COG1197@2|Bacteria,1MUXG@1224|Proteobacteria,1RNCU@1236|Gammaproteobacteria,1WWJQ@135613|Chromatiales 135613|Chromatiales L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site mfd - - ko:K03723 ko03420,map03420 - - - ko00000,ko00001,ko01000,ko03400 - - - CarD_CdnL_TRCF,DEAD,Helicase_C,TRCF QTD1_k127_1556688_6 1198232.CYCME_1744 5.347e-09 66.0 2EC19@1|root,3360G@2|Bacteria,1PBYU@1224|Proteobacteria,1SD34@1236|Gammaproteobacteria,461FP@72273|Thiotrichales 72273|Thiotrichales S Peptidoglycan-binding protein, CsiV - - - - - - - - - - - - CsiV QTD1_k127_1556688_4 696747.NIES39_C01090 4.572e-55 207.0 COG2199@1|root,COG2202@1|root,COG3437@1|root,COG2202@2|Bacteria,COG3437@2|Bacteria,COG3706@2|Bacteria,1G2A0@1117|Cyanobacteria,1H8JI@1150|Oscillatoriales 1117|Cyanobacteria T COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - - - - - - - - - - GGDEF,PAS_4,PAS_9,Response_reg QTD1_k127_1556688_1 396588.Tgr7_1754 6.098e-105 361.0 COG1472@1|root,COG1472@2|Bacteria,1MVAJ@1224|Proteobacteria,1RMQF@1236|Gammaproteobacteria,1WXR0@135613|Chromatiales 135613|Chromatiales G Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides nagZ - 3.2.1.52 ko:K01207 ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501 M00628 R00022,R05963,R07809,R07810,R10831 RC00049 ko00000,ko00001,ko00002,ko01000 - - - Glyco_hydro_3 QTD1_k127_1556688_2 519989.ECTPHS_08423 1.079e-89 305.0 COG2265@1|root,COG2265@2|Bacteria,1MV3A@1224|Proteobacteria,1RN1D@1236|Gammaproteobacteria,1WWDA@135613|Chromatiales 135613|Chromatiales J Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA rlmD - 2.1.1.190 ko:K03215 - - - - ko00000,ko01000,ko03009 - - - TRAM,tRNA_U5-meth_tr QTD1_k127_1558377_3 944435.AXAJ01000007_gene1549 4.319e-06 50.0 COG2271@1|root,COG2271@2|Bacteria,1QW8U@1224|Proteobacteria,2VIWH@28216|Betaproteobacteria,1K20X@119060|Burkholderiaceae 28216|Betaproteobacteria G Spermidine putrescine ABC transporter substrate-binding protein - - - ko:K08177 - - - - ko00000,ko02000 2.A.1.11 - - MFS_1 QTD1_k127_1558377_0 1217718.ALOU01000061_gene474 0.0 1059.0 COG0028@1|root,COG0028@2|Bacteria,1MXDW@1224|Proteobacteria,2VI39@28216|Betaproteobacteria,1KHV1@119060|Burkholderiaceae 28216|Betaproteobacteria EH Belongs to the TPP enzyme family - - 2.2.1.6 ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N QTD1_k127_1558377_1 1169143.KB911038_gene5804 1.874e-243 756.0 COG1804@1|root,COG1804@2|Bacteria,1MU2K@1224|Proteobacteria,2VMNC@28216|Betaproteobacteria,1K01E@119060|Burkholderiaceae 28216|Betaproteobacteria C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate frc - 2.8.3.16 ko:K07749 - - - - ko00000,ko01000 - - - CoA_transf_3 QTD1_k127_1558377_2 640510.BC1001_5184 1.13e-125 408.0 COG0045@1|root,COG1042@1|root,COG0045@2|Bacteria,COG1042@2|Bacteria,1MW98@1224|Proteobacteria,2VI9R@28216|Betaproteobacteria,1K035@119060|Burkholderiaceae 28216|Betaproteobacteria C CoA-binding domain protein - - - ko:K09181 - - - - ko00000 - - - ATP-grasp_5,Acetyltransf_3,Acetyltransf_4,CoA_binding_2,Succ_CoA_lig QTD1_k127_155851_6 452662.SJA_C1-23860 9.61e-16 86.0 COG4770@1|root,COG4770@2|Bacteria,1P6RE@1224|Proteobacteria,2TRC2@28211|Alphaproteobacteria,2K27B@204457|Sphingomonadales 204457|Sphingomonadales I acetyl propionyl-CoA carboxylase, alpha subunit - - 6.4.1.4 ko:K01968 ko00280,ko01100,map00280,map01100 M00036 R04138 RC00367,RC00942 ko00000,ko00001,ko00002,ko01000 - - - Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2 QTD1_k127_155851_0 1207063.P24_11415 1.168e-248 781.0 COG4799@1|root,COG4799@2|Bacteria,1MVAX@1224|Proteobacteria,2TRA0@28211|Alphaproteobacteria,2JQ2J@204441|Rhodospirillales 204441|Rhodospirillales I Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - 6.4.1.4 ko:K01969 ko00280,ko01100,map00280,map01100 M00036 R04138 RC00367,RC00942 ko00000,ko00001,ko00002,ko01000 - - - Carboxyl_trans QTD1_k127_155851_1 1437448.AZRT01000037_gene3083 3.121e-173 551.0 COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TREJ@28211|Alphaproteobacteria,1J1AM@118882|Brucellaceae 28211|Alphaproteobacteria C Acyl-CoA dehydrogenase, C-terminal domain ivd - 1.3.8.4 ko:K00253 ko00280,ko01100,map00280,map01100 M00036 R04095 RC00246 ko00000,ko00001,ko00002,ko01000 - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N QTD1_k127_155851_5 1411123.JQNH01000001_gene612 6.163e-39 157.0 COG2186@1|root,COG2186@2|Bacteria,1R5KH@1224|Proteobacteria,2TSJE@28211|Alphaproteobacteria 28211|Alphaproteobacteria K FCD - - - - - - - - - - - - FCD,GntR QTD1_k127_155851_3 1001585.MDS_3653 6.602e-63 223.0 COG1704@1|root,COG1704@2|Bacteria,1R9YG@1224|Proteobacteria,1T06D@1236|Gammaproteobacteria,1YDPY@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria S LemA family lemA - - ko:K03744 - - - - ko00000 - - - LemA QTD1_k127_155851_4 1123257.AUFV01000012_gene2909 5.773e-47 181.0 2DKZI@1|root,310D6@2|Bacteria,1QV1U@1224|Proteobacteria,1T4NK@1236|Gammaproteobacteria,1X684@135614|Xanthomonadales 135614|Xanthomonadales S E3 Ubiquitin ligase - - - - - - - - - - - - GIDE QTD1_k127_155851_2 62928.azo1280 6.941e-115 376.0 COG0543@1|root,COG0543@2|Bacteria,1QTSK@1224|Proteobacteria,2VH0M@28216|Betaproteobacteria,2KUPK@206389|Rhodocyclales 206389|Rhodocyclales CH oxidoreductase FAD NAD(P)-binding - - 1.18.1.2,1.19.1.1 ko:K00528 - - R10159 - ko00000,ko01000 - - - FAD_binding_6,NAD_binding_1 QTD1_k127_155851_7 629773.AORY01000014_gene2565 3.871e-13 77.0 2AY99@1|root,31QBJ@2|Bacteria,1RI92@1224|Proteobacteria,2UU4D@28211|Alphaproteobacteria 28211|Alphaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_1597846_3 1432056.X781_17370 0.0001147 45.0 COG1663@1|root,COG1663@2|Bacteria,1MU8G@1224|Proteobacteria,1RMMW@1236|Gammaproteobacteria,1Y6RT@135625|Pasteurellales 135625|Pasteurellales F Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) lpxK - 2.7.1.130 ko:K00912 ko00540,ko01100,map00540,map01100 M00060 R04657 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko01005 - - - LpxK QTD1_k127_1597846_2 62928.azo1471 5.921e-19 90.0 COG2835@1|root,COG2835@2|Bacteria,1N6Y2@1224|Proteobacteria,2VW58@28216|Betaproteobacteria,2KXCI@206389|Rhodocyclales 206389|Rhodocyclales S Belongs to the UPF0434 family - - - ko:K09791 - - - - ko00000 - - - Trm112p QTD1_k127_1597846_0 713586.KB900536_gene315 6.9e-74 256.0 COG1212@1|root,COG1212@2|Bacteria,1MUUU@1224|Proteobacteria,1RMAE@1236|Gammaproteobacteria,1WWTZ@135613|Chromatiales 135613|Chromatiales M Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria kdsB - 2.7.7.38 ko:K00979 ko00540,ko01100,map00540,map01100 M00063 R03351,R11396 RC00152,RC00910 ko00000,ko00001,ko00002,ko01000,ko01005 - - - CTP_transf_3 QTD1_k127_1600025_4 1502770.JQMG01000001_gene236 3.066e-43 162.0 COG0607@1|root,COG2905@1|root,COG0607@2|Bacteria,COG2905@2|Bacteria,1R9Q1@1224|Proteobacteria,2VQGZ@28216|Betaproteobacteria,2KNP5@206350|Nitrosomonadales 206350|Nitrosomonadales PT Cyclic nucleotide-monophosphate binding domain - - - - - - - - - - - - Rhodanese,cNMP_binding QTD1_k127_1600025_2 1123257.AUFV01000001_gene1911 1.171e-50 182.0 COG3215@1|root,COG3215@2|Bacteria,1RGWZ@1224|Proteobacteria,1S4YE@1236|Gammaproteobacteria,1X6W7@135614|Xanthomonadales 135614|Xanthomonadales NU Pilus assembly protein PilZ pilZ - - ko:K02676 - - - - ko00000,ko02035,ko02044 - - - PilZ QTD1_k127_1600025_3 243233.MCA1995 1.687e-43 179.0 COG0470@1|root,COG0470@2|Bacteria,1MY1W@1224|Proteobacteria,1RNYA@1236|Gammaproteobacteria,1XDVJ@135618|Methylococcales 135618|Methylococcales L DNA polymerase III, delta' holB - 2.7.7.7 ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_delta2,DNApol3-delta_C QTD1_k127_1600025_1 1278309.KB907101_gene782 1.619e-63 225.0 COG0125@1|root,COG0125@2|Bacteria,1MV9C@1224|Proteobacteria,1S26C@1236|Gammaproteobacteria,1XJCZ@135619|Oceanospirillales 135619|Oceanospirillales F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis tmk - 2.7.4.9 ko:K00943 ko00240,ko01100,map00240,map01100 M00053 R02094,R02098 RC00002 ko00000,ko00001,ko00002,ko01000 - - - Thymidylate_kin QTD1_k127_1600025_0 1122604.JONR01000018_gene1117 2.517e-82 286.0 COG1559@1|root,COG1559@2|Bacteria,1MUQF@1224|Proteobacteria,1RMWD@1236|Gammaproteobacteria,1X31Z@135614|Xanthomonadales 135614|Xanthomonadales S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation mltG - - ko:K07082 - - - - ko00000 - - - YceG QTD1_k127_1601802_1 1282362.AEAC466_01200 5.278e-158 509.0 COG0006@1|root,COG0006@2|Bacteria,1MUZS@1224|Proteobacteria,2TRQ5@28211|Alphaproteobacteria,2KFSJ@204458|Caulobacterales 204458|Caulobacterales E Belongs to the peptidase M24B family - - 3.4.13.9 ko:K01271 - - - - ko00000,ko01000,ko01002 - - - Creatinase_N,Peptidase_M24 QTD1_k127_1601802_2 1123060.JONP01000007_gene5121 1.401e-98 331.0 COG1028@1|root,COG1028@2|Bacteria,1MWGC@1224|Proteobacteria,2TSNX@28211|Alphaproteobacteria,2JRKC@204441|Rhodospirillales 204441|Rhodospirillales IQ KR domain - - - - - - - - - - - - adh_short_C2 QTD1_k127_1601802_0 748247.AZKH_p0004 6.519e-200 631.0 COG1113@1|root,COG1113@2|Bacteria,1MUPS@1224|Proteobacteria,2VH3N@28216|Betaproteobacteria,2KXUM@206389|Rhodocyclales 206389|Rhodocyclales E Amino acid permease - - - ko:K03293 - - - - ko00000 2.A.3.1 - - AA_permease QTD1_k127_1601802_3 1121124.JNIX01000014_gene1131 7.463e-12 77.0 COG1807@1|root,COG1807@2|Bacteria,1NMIZ@1224|Proteobacteria,2TRS4@28211|Alphaproteobacteria,2KEZT@204458|Caulobacterales 204458|Caulobacterales M glycosyl transferase family 39 - - - - - - - - - - - - PMT,PMT_2 QTD1_k127_1601802_4 748280.NH8B_3251 6.418e-07 51.0 COG0845@1|root,COG0845@2|Bacteria,1MU8D@1224|Proteobacteria,2VH9K@28216|Betaproteobacteria,2KPYG@206351|Neisseriales 206351|Neisseriales M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K02005 - - - - ko00000 - - - HlyD_D23 QTD1_k127_1610852_2 870187.Thini_2691 8.597e-41 156.0 COG0515@1|root,COG0515@2|Bacteria,1QXK0@1224|Proteobacteria,1T3DE@1236|Gammaproteobacteria 1236|Gammaproteobacteria KLT serine threonine protein kinase - - 2.7.11.1 ko:K11912 ko02025,ko03070,map02025,map03070 - - - ko00000,ko00001,ko01000,ko01001,ko02044 - - - Pkinase,TIR_2 QTD1_k127_1610852_1 349521.HCH_02150 4.761e-41 166.0 COG4445@1|root,COG4445@2|Bacteria,1MVFE@1224|Proteobacteria,1RQ8Z@1236|Gammaproteobacteria,1XIJ2@135619|Oceanospirillales 135619|Oceanospirillales FJ Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA miaE - - ko:K06169 - - - - ko00000,ko01000,ko03016 - - - MiaE QTD1_k127_1610852_0 1163617.SCD_n01435 8.733e-86 291.0 COG0745@1|root,COG0745@2|Bacteria,1MY3D@1224|Proteobacteria,2VI0K@28216|Betaproteobacteria 28216|Betaproteobacteria K COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - ko:K02483 - - - - ko00000,ko02022 - - - Response_reg,Trans_reg_C QTD1_k127_1610852_3 1163617.SCD_n01434 1.946e-28 128.0 COG0642@1|root,COG3850@1|root,COG2205@2|Bacteria,COG3850@2|Bacteria,1MUAK@1224|Proteobacteria,2WGJC@28216|Betaproteobacteria 28216|Betaproteobacteria T Histidine kinase - - - - - - - - - - - - HAMP,HATPase_c,HisKA QTD1_k127_167867_0 1123392.AQWL01000005_gene3146 1.251e-271 860.0 COG0392@1|root,COG2898@1|root,COG0392@2|Bacteria,COG2898@2|Bacteria,1MXH9@1224|Proteobacteria,2VK9C@28216|Betaproteobacteria 28216|Betaproteobacteria S Uncharacterised conserved protein (DUF2156) - - 2.3.2.3 ko:K07027,ko:K14205 ko01503,ko02020,ko05150,map01503,map02020,map05150 M00726 - - ko00000,ko00001,ko00002,ko01000,ko01504,ko02000 2.A.1.3.37,4.D.2 - - DUF2156,LPG_synthase_TM QTD1_k127_167867_1 686340.Metal_1357 5.114e-56 196.0 COG0488@1|root,COG0488@2|Bacteria,1MU37@1224|Proteobacteria,1RPWS@1236|Gammaproteobacteria,1XE4C@135618|Methylococcales 135618|Methylococcales S TIGRFAM ATP-binding cassette protein, ChvD family - - - - - - - - - - - - ABC_tran,ABC_tran_Xtn QTD1_k127_1697978_1 1007104.SUS17_1781 3.77e-194 618.0 28MSW@1|root,2ZB15@2|Bacteria,1PSQ1@1224|Proteobacteria,2UPF1@28211|Alphaproteobacteria,2JZWK@204457|Sphingomonadales 204457|Sphingomonadales - - - - - - - - - - - - - - - QTD1_k127_1697978_0 1163409.UUA_17727 4.336e-267 842.0 COG1554@1|root,COG1554@2|Bacteria,1MWJE@1224|Proteobacteria,1RPN6@1236|Gammaproteobacteria,1X977@135614|Xanthomonadales 135614|Xanthomonadales G Glycosyl hydrolase family 65 central catalytic domain - - - - - - - - - - - - Glyco_hydro_65N,Glyco_hydro_65m QTD1_k127_1697978_2 1267535.KB906767_gene1119 4.618e-62 224.0 293RY@1|root,2ZR7G@2|Bacteria,3Y953@57723|Acidobacteria 57723|Acidobacteria - - - - - - - - - - - - - - - QTD1_k127_1697978_3 1248916.ANFY01000007_gene2240 1.149e-06 50.0 COG0251@1|root,COG0251@2|Bacteria,1RCX5@1224|Proteobacteria,2U74Y@28211|Alphaproteobacteria,2K6P3@204457|Sphingomonadales 204457|Sphingomonadales J Endoribonuclease L-PSP - - - - - - - - - - - - Ribonuc_L-PSP QTD1_k127_1728982_10 690850.Desaf_2570 1.377e-33 138.0 COG0454@1|root,COG0456@2|Bacteria,1RHB3@1224|Proteobacteria 1224|Proteobacteria K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - ko:K03829 - - - - ko00000,ko01000 - - - Acetyltransf_1 QTD1_k127_1728982_8 1278073.MYSTI_01900 2.993e-47 177.0 COG1670@1|root,COG1670@2|Bacteria,1N4JG@1224|Proteobacteria 1224|Proteobacteria J Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_3 QTD1_k127_1728982_11 675812.VHA_001981 4.289e-31 130.0 COG0494@1|root,COG0494@2|Bacteria,1RDMW@1224|Proteobacteria,1RPZV@1236|Gammaproteobacteria,1XUUC@135623|Vibrionales 135623|Vibrionales L COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes nudF - 3.6.1.13 ko:K01515 ko00230,map00230 - R01054 RC00002 ko00000,ko00001,ko01000 - - - NUDIX QTD1_k127_1728982_3 1297742.A176_05605 2.15e-97 338.0 COG0457@1|root,COG0457@2|Bacteria,1Q3YA@1224|Proteobacteria,437VH@68525|delta/epsilon subdivisions,2X354@28221|Deltaproteobacteria,2YUAY@29|Myxococcales 28221|Deltaproteobacteria S Peptidase family M49 - - - - - - - - - - - - Peptidase_M49 QTD1_k127_1728982_12 1449063.JMLS01000016_gene953 1.102e-06 55.0 2EG8N@1|root,33A0G@2|Bacteria,1VMHK@1239|Firmicutes,4HSIH@91061|Bacilli 91061|Bacilli - - - - - - - - - - - - - - - QTD1_k127_1728982_2 1380394.JADL01000004_gene6061 6.81e-106 361.0 COG4775@1|root,COG4775@2|Bacteria,1RDM0@1224|Proteobacteria 1224|Proteobacteria M Surface antigen - - - - - - - - - - - - Bac_surface_Ag QTD1_k127_1728982_5 1096930.L284_13075 4.691e-78 290.0 COG4773@1|root,COG4773@2|Bacteria 2|Bacteria P Receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - Plug,TonB_dep_Rec QTD1_k127_1728982_6 1123242.JH636436_gene594 5.445e-72 248.0 COG1611@1|root,COG1611@2|Bacteria,2IZK9@203682|Planctomycetes 203682|Planctomycetes S Belongs to the LOG family - - 3.2.2.10 ko:K06966 ko00230,ko00240,map00230,map00240 - R00182,R00510 RC00063,RC00318 ko00000,ko00001,ko01000 - - - Lysine_decarbox QTD1_k127_1728982_0 748280.NH8B_2704 4.12e-246 780.0 COG1529@1|root,COG1529@2|Bacteria,1QTTJ@1224|Proteobacteria,2VHB9@28216|Betaproteobacteria,2KSMJ@206351|Neisseriales 206351|Neisseriales C Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - 1.3.99.16 ko:K07303 - - - - ko00000,ko01000 - - - Ald_Xan_dh_C,Ald_Xan_dh_C2 QTD1_k127_1728982_7 1123400.KB904748_gene361 2.322e-70 242.0 COG2080@1|root,COG2080@2|Bacteria,1RD8C@1224|Proteobacteria,1S3RP@1236|Gammaproteobacteria,460UC@72273|Thiotrichales 72273|Thiotrichales C [2Fe-2S] binding domain - - 1.3.99.16 ko:K07302 - - - - ko00000,ko01000 - - - Fer2,Fer2_2 QTD1_k127_1728982_1 392499.Swit_1082 6.947e-159 518.0 COG2939@1|root,COG2939@2|Bacteria,1MW05@1224|Proteobacteria,2TS7R@28211|Alphaproteobacteria,2K0U5@204457|Sphingomonadales 28211|Alphaproteobacteria E peptidase S10 serine carboxypeptidase - - - - - - - - - - - - Peptidase_S10 QTD1_k127_1728982_4 519989.ECTPHS_12580 2.961e-80 278.0 COG0220@1|root,COG0220@2|Bacteria,1MUWJ@1224|Proteobacteria,1RMFG@1236|Gammaproteobacteria,1WY2P@135613|Chromatiales 135613|Chromatiales J catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA trmB - 2.1.1.33 ko:K03439 - - - - ko00000,ko01000,ko03016 - - - Methyltransf_4 QTD1_k127_1728982_9 414684.RC1_2503 2.327e-45 171.0 COG2095@1|root,COG2095@2|Bacteria,1MX5T@1224|Proteobacteria,2U59A@28211|Alphaproteobacteria,2JSXR@204441|Rhodospirillales 204441|Rhodospirillales U MarC family integral membrane protein - - - ko:K05595 - - - - ko00000,ko02000 2.A.95.1 - - MarC QTD1_k127_1730555_3 765911.Thivi_0083 1.093e-36 143.0 COG2060@1|root,COG2060@2|Bacteria,1MV1K@1224|Proteobacteria,1RQZU@1236|Gammaproteobacteria,1WX7W@135613|Chromatiales 135613|Chromatiales P Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane kdpA - 3.6.3.12 ko:K01546 ko02020,map02020 - - - ko00000,ko00001,ko01000 3.A.3.7 - - KdpA QTD1_k127_1730555_6 29581.BW37_04425 1.28e-21 100.0 2EK70@1|root,33DXD@2|Bacteria,1NA99@1224|Proteobacteria,2WCK9@28216|Betaproteobacteria,477U2@75682|Oxalobacteraceae 28216|Betaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_1730555_0 215803.DB30_6056 1.405e-115 379.0 COG1619@1|root,COG1619@2|Bacteria,1MWIY@1224|Proteobacteria,42Q52@68525|delta/epsilon subdivisions,2WJ3S@28221|Deltaproteobacteria,2YV3I@29|Myxococcales 28221|Deltaproteobacteria V LD-carboxypeptidase - - 3.4.17.13 ko:K01297 - - - - ko00000,ko01000,ko01002,ko01011 - - - Peptidase_S66 QTD1_k127_1730555_7 1123073.KB899241_gene2058 1.44e-10 71.0 2EGSV@1|root,33AIZ@2|Bacteria,1NGPG@1224|Proteobacteria,1SGM3@1236|Gammaproteobacteria,1X8YC@135614|Xanthomonadales 135614|Xanthomonadales S Cysteine-rich CPXCG - - - - - - - - - - - - Cys_rich_CPXG QTD1_k127_1730555_1 1219375.CM002139_gene2476 1.291e-52 198.0 COG3735@1|root,COG3735@2|Bacteria,1NARA@1224|Proteobacteria,1T12Y@1236|Gammaproteobacteria,1X4VR@135614|Xanthomonadales 135614|Xanthomonadales S TraB family gumN - - - - - - - - - - - TraB QTD1_k127_1730555_4 1089552.KI911559_gene2387 3.855e-36 148.0 COG0705@1|root,COG0705@2|Bacteria,1N258@1224|Proteobacteria 1224|Proteobacteria S PFAM Rhomboid family protein - - - - - - - - - - - - Rhomboid QTD1_k127_1730555_2 1175306.GWL_26020 2.181e-38 153.0 COG1434@1|root,COG1434@2|Bacteria,1MVW8@1224|Proteobacteria,2VSTA@28216|Betaproteobacteria,4747P@75682|Oxalobacteraceae 28216|Betaproteobacteria S DUF218 domain - - - - - - - - - - - - DUF218 QTD1_k127_1730555_5 1385935.N836_00970 1.741e-24 105.0 COG0534@1|root,COG0534@2|Bacteria 2|Bacteria V drug transmembrane transporter activity norM-2 - - ko:K03327 - - - - ko00000,ko02000 2.A.66.1 - - MatE QTD1_k127_1739462_3 760117.JN27_23400 7.835e-06 51.0 COG2900@1|root,COG2900@2|Bacteria,1NGFM@1224|Proteobacteria,2VXFA@28216|Betaproteobacteria,474ZE@75682|Oxalobacteraceae 28216|Betaproteobacteria S SlyX - - - ko:K03745 - - - - ko00000 - - - SlyX QTD1_k127_1739462_1 1123504.JQKD01000013_gene1012 1.846e-56 204.0 COG0705@1|root,COG0705@2|Bacteria,1MYFP@1224|Proteobacteria,2VQB1@28216|Betaproteobacteria,4AHHN@80864|Comamonadaceae 28216|Betaproteobacteria S Eukaryotic integral membrane protein (DUF1751) - - - - - - - - - - - - Rhomboid QTD1_k127_1739462_2 1214065.BAGV01000009_gene3317 9.785e-54 196.0 COG1671@1|root,COG1671@2|Bacteria,1RCZA@1224|Proteobacteria,1S3QM@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Belongs to the UPF0178 family yaiI - - ko:K09768 - - - - ko00000 - - - DUF188 QTD1_k127_1739462_0 243231.GSU0821 3.802e-63 232.0 296ZZ@1|root,2ZU8H@2|Bacteria,1RED2@1224|Proteobacteria,42RDU@68525|delta/epsilon subdivisions,2WPHV@28221|Deltaproteobacteria 28221|Deltaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_1745006_5 1286631.X805_08390 6.727e-38 153.0 COG0354@1|root,COG0354@2|Bacteria,1N852@1224|Proteobacteria,2VK2D@28216|Betaproteobacteria,1KJWV@119065|unclassified Burkholderiales 28216|Betaproteobacteria S Belongs to the GcvT family ygfZ - - ko:K06980 - - - - ko00000,ko03016 - - - GCV_T,GCV_T_C QTD1_k127_1745006_7 1469613.JT55_14625 8.925e-25 108.0 COG2009@1|root,COG2009@2|Bacteria,1N02N@1224|Proteobacteria,2UC47@28211|Alphaproteobacteria,3FDBZ@34008|Rhodovulum 28211|Alphaproteobacteria C Succinate dehydrogenase/Fumarate reductase transmembrane subunit sdhC GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - ko:K00241 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002 - - - Sdh_cyt QTD1_k127_1745006_6 331869.BAL199_10562 1.702e-30 133.0 COG2142@1|root,COG2142@2|Bacteria,1MZND@1224|Proteobacteria,2U94P@28211|Alphaproteobacteria,4BR1M@82117|unclassified Alphaproteobacteria 28211|Alphaproteobacteria C succinate dehydrogenase sdhD - - ko:K00242 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173 R02164 RC00045 ko00000,ko00001,ko00002 - - - Sdh_cyt QTD1_k127_1745006_0 519989.ECTPHS_11050 8.699e-308 958.0 COG1053@1|root,COG1053@2|Bacteria,1MU5M@1224|Proteobacteria,1RMU2@1236|Gammaproteobacteria,1WW72@135613|Chromatiales 135613|Chromatiales C Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily sdhA - 1.3.5.1,1.3.5.4 ko:K00239 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 - - - FAD_binding_2,Succ_DH_flav_C QTD1_k127_1745006_2 697282.Mettu_0494 4.28e-121 397.0 COG0479@1|root,COG0479@2|Bacteria,1MVHS@1224|Proteobacteria,1RNWR@1236|Gammaproteobacteria,1XERG@135618|Methylococcales 135618|Methylococcales C succinate dehydrogenase fumarate reductase sdhB - 1.3.5.1,1.3.5.4 ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 - - - Fer2_3,Fer4_17 QTD1_k127_1745006_8 1123253.AUBD01000008_gene496 2.752e-11 69.0 COG2938@1|root,COG2938@2|Bacteria,1N7P4@1224|Proteobacteria,1SCKB@1236|Gammaproteobacteria,1X883@135614|Xanthomonadales 135614|Xanthomonadales S Flavinator of succinate dehydrogenase - - - ko:K09159 - - - - ko00000,ko02048 - - - Sdh5 QTD1_k127_1745006_3 1335757.SPICUR_06225 1.106e-71 251.0 COG1595@1|root,COG1595@2|Bacteria,1MX7T@1224|Proteobacteria,1RN64@1236|Gammaproteobacteria,1WXBZ@135613|Chromatiales 135613|Chromatiales K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 QTD1_k127_1745006_11 1279019.ARQK01000028_gene1232 0.000495 51.0 COG3073@1|root,COG3073@2|Bacteria,1N9FN@1224|Proteobacteria,1SGPC@1236|Gammaproteobacteria,1WYNC@135613|Chromatiales 135613|Chromatiales T PFAM Anti sigma-E protein RseA - - - ko:K03597 - - - - ko00000,ko03021 - - - RseA_N QTD1_k127_1745006_4 1304275.C41B8_09045 1.234e-48 188.0 COG3026@1|root,COG3026@2|Bacteria,1MUQ8@1224|Proteobacteria,1RNF3@1236|Gammaproteobacteria 1236|Gammaproteobacteria T Negative regulator of sigma E activity rseB GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0044464,GO:0045152 - ko:K03598 - - - - ko00000,ko03021 - - - MucB_RseB,MucB_RseB_C QTD1_k127_1745006_9 272560.BPSL2432 1.172e-10 68.0 COG0695@1|root,COG0695@2|Bacteria,1N82H@1224|Proteobacteria,2VWG7@28216|Betaproteobacteria,1K9F5@119060|Burkholderiaceae 28216|Betaproteobacteria O PFAM glutaredoxin 2 - - - - - - - - - - - - DUF836 QTD1_k127_1745006_1 243233.MCA1466 1.408e-245 773.0 COG0481@1|root,COG0481@2|Bacteria,1MVZA@1224|Proteobacteria,1RPFB@1236|Gammaproteobacteria,1XE1C@135618|Methylococcales 135618|Methylococcales J Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner lepA - - ko:K03596 ko05134,map05134 - - - ko00000,ko00001 - - - EFG_C,EFG_II,GTP_EFTU,GTP_EFTU_D2,LepA_C QTD1_k127_1745374_14 1123073.KB899242_gene1289 1.194e-13 75.0 COG1228@1|root,COG1228@2|Bacteria,1MVAF@1224|Proteobacteria,1RQRP@1236|Gammaproteobacteria,1X3Y7@135614|Xanthomonadales 135614|Xanthomonadales Q Amidohydrolase family - - - - - - - - - - - - Amidohydro_1 QTD1_k127_1745374_10 1267535.KB906767_gene5461 2.3e-32 130.0 COG3682@1|root,COG3682@2|Bacteria,3Y8CR@57723|Acidobacteria,2JN9Z@204432|Acidobacteriia 204432|Acidobacteriia K Penicillinase repressor - - - - - - - - - - - - Penicillinase_R QTD1_k127_1745374_12 682795.AciX8_2514 7.135e-21 104.0 COG4219@1|root,COG4219@2|Bacteria,3Y63E@57723|Acidobacteria,2JK8X@204432|Acidobacteriia 204432|Acidobacteriia KT Protein of unknown function (DUF3738) - - - - - - - - - - - - DUF3738,Peptidase_M56 QTD1_k127_1745374_7 1144305.PMI02_03956 2.26e-38 147.0 COG2350@1|root,COG2350@2|Bacteria,1MZ8Y@1224|Proteobacteria,2UHFW@28211|Alphaproteobacteria,2KB02@204457|Sphingomonadales 204457|Sphingomonadales S YCII-related domain - - - ko:K09780 - - - - ko00000 - - - YCII QTD1_k127_1745374_9 1123401.JHYQ01000013_gene637 5.507e-35 139.0 COG2020@1|root,COG2020@2|Bacteria,1MZ7S@1224|Proteobacteria,1S8Y4@1236|Gammaproteobacteria,461EC@72273|Thiotrichales 72273|Thiotrichales O Phospholipid methyltransferase - - - - - - - - - - - - PEMT QTD1_k127_1745374_0 1198114.AciX9_0877 3.79e-189 602.0 COG1473@1|root,COG1473@2|Bacteria,3Y40E@57723|Acidobacteria,2JIBT@204432|Acidobacteriia 204432|Acidobacteriia S Peptidase dimerisation domain - - - - - - - - - - - - M20_dimer,Peptidase_M20 QTD1_k127_1745374_13 261292.Nit79A3_2267 1.779e-16 88.0 2E84E@1|root,332I4@2|Bacteria,1NFMY@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - QTD1_k127_1745374_8 261292.Nit79A3_2268 1.812e-35 146.0 COG4782@1|root,COG4782@2|Bacteria,1N9HN@1224|Proteobacteria 1224|Proteobacteria S Alpha/beta hydrolase of unknown function (DUF900) - - - - - - - - - - - - DUF900 QTD1_k127_1745374_6 1192124.LIG30_3003 5.938e-42 164.0 2A201@1|root,30Q9W@2|Bacteria,1MY4F@1224|Proteobacteria,2W7UN@28216|Betaproteobacteria,1KF61@119060|Burkholderiaceae 28216|Betaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_1745374_1 1101191.KI912577_gene1067 1.387e-100 342.0 COG1404@1|root,COG1404@2|Bacteria,1MU3S@1224|Proteobacteria,2TT0E@28211|Alphaproteobacteria,1JVW0@119045|Methylobacteriaceae 28211|Alphaproteobacteria O Belongs to the peptidase S8 family - - - - - - - - - - - - Peptidase_S8 QTD1_k127_1745374_11 234267.Acid_3148 1.091e-21 102.0 COG1595@1|root,COG1595@2|Bacteria 2|Bacteria K DNA-templated transcription, initiation - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 QTD1_k127_1745374_5 1173025.GEI7407_2596 2.695e-47 197.0 COG0457@1|root,COG4995@1|root,COG0457@2|Bacteria,COG4995@2|Bacteria,1G135@1117|Cyanobacteria,1H8D7@1150|Oscillatoriales 1117|Cyanobacteria M Tetratricopeptide repeat - - - - - - - - - - - - CHAT,TPR_1,TPR_10,TPR_12,TPR_7,TPR_8 QTD1_k127_1745374_3 62928.azo2405 1.233e-61 215.0 COG1764@1|root,COG1764@2|Bacteria,1RD1A@1224|Proteobacteria,2VR4T@28216|Betaproteobacteria,2KXA8@206389|Rhodocyclales 206389|Rhodocyclales O OsmC-like protein - - - - - - - - - - - - OsmC QTD1_k127_1745374_2 240016.ABIZ01000001_gene1826 1.07e-99 334.0 COG0560@1|root,COG0560@2|Bacteria,46U2B@74201|Verrucomicrobia 74201|Verrucomicrobia E haloacid dehalogenase-like hydrolase - - - - - - - - - - - - HAD QTD1_k127_1745374_4 566466.NOR53_2636 1.817e-47 189.0 29D6U@1|root,3004T@2|Bacteria,1R9I1@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - QTD1_k127_1745374_17 1346791.M529_00995 8.86e-06 48.0 COG2010@1|root,COG2133@1|root,COG2010@2|Bacteria,COG2133@2|Bacteria,1MVK5@1224|Proteobacteria,2TRN9@28211|Alphaproteobacteria 28211|Alphaproteobacteria G glucose sorbosone - - - - - - - - - - - - Cytochrome_CBB3,GSDH QTD1_k127_1745374_16 760117.JN27_10825 4.633e-10 66.0 2DSB1@1|root,33FBE@2|Bacteria,1NHY1@1224|Proteobacteria,2VYJI@28216|Betaproteobacteria 28216|Betaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_1745374_15 1123377.AUIV01000006_gene1483 7.383e-13 74.0 COG4244@1|root,COG4244@2|Bacteria,1RF4K@1224|Proteobacteria,1S637@1236|Gammaproteobacteria,1X6NV@135614|Xanthomonadales 135614|Xanthomonadales S Predicted membrane protein (DUF2231) - - - - - - - - - - - - DUF2231 QTD1_k127_1749089_7 391625.PPSIR1_00215 1.184e-23 102.0 COG4539@1|root,COG4539@2|Bacteria,1PPS4@1224|Proteobacteria,436UX@68525|delta/epsilon subdivisions,2X1IW@28221|Deltaproteobacteria,2YX1D@29|Myxococcales 28221|Deltaproteobacteria S Protein of unknown function (DUF962) - - - - - - - - - - - - DUF962 QTD1_k127_1749089_4 1205908.AKXW01000165_gene2470 2.195e-148 482.0 COG0281@1|root,COG0281@2|Bacteria,1MU0A@1224|Proteobacteria,1RN5F@1236|Gammaproteobacteria,1XSB5@135623|Vibrionales 1236|Gammaproteobacteria C malic enzyme - - 1.1.1.38,1.1.1.40 ko:K00027,ko:K00029 ko00620,ko00710,ko01100,ko01120,ko01200,ko02020,map00620,map00710,map01100,map01120,map01200,map02020 M00169,M00172 R00214,R00216 RC00105 ko00000,ko00001,ko00002,ko01000 - - - Malic_M,malic QTD1_k127_1749089_3 935567.JAES01000003_gene234 1.634e-190 602.0 COG1960@1|root,COG1960@2|Bacteria,1MUK0@1224|Proteobacteria,1RNBX@1236|Gammaproteobacteria,1X45S@135614|Xanthomonadales 135614|Xanthomonadales I Acyl-CoA dehydrogenase gcdH - 1.3.8.6 ko:K00252 ko00071,ko00310,ko00362,ko00380,ko01100,ko01120,ko01130,map00071,map00310,map00362,map00380,map01100,map01120,map01130 M00032 R02487,R02488,R10074 RC00052,RC00156 ko00000,ko00001,ko00002,ko01000 - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N QTD1_k127_1749089_1 1123073.KB899241_gene2554 1.399e-279 869.0 COG1620@1|root,COG1620@2|Bacteria,1MV13@1224|Proteobacteria,1RPNW@1236|Gammaproteobacteria,1X5B3@135614|Xanthomonadales 135614|Xanthomonadales C L-lactate permease lctP - - ko:K00427,ko:K03303 - - - - ko00000,ko02000 2.A.14,2.A.14.1.1 - - Lactate_perm QTD1_k127_1749089_6 1121921.KB898706_gene3121 3.258e-96 319.0 COG0745@1|root,COG0745@2|Bacteria,1MVCB@1224|Proteobacteria,1RM87@1236|Gammaproteobacteria,2PMM9@256005|Alteromonadales genera incertae sedis 1236|Gammaproteobacteria T Transcriptional regulatory protein, C terminal chvI GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042802,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - ko:K02483,ko:K07663 ko02020,map02020 M00449 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C QTD1_k127_1749089_5 1121937.AUHJ01000003_gene3229 7.247e-111 383.0 COG0642@1|root,COG0642@2|Bacteria,1QU3Z@1224|Proteobacteria,1T311@1236|Gammaproteobacteria,46D2F@72275|Alteromonadaceae 1236|Gammaproteobacteria T Histidine kinase - - - - - - - - - - - - CBM9_1,HATPase_c,HisKA QTD1_k127_1749089_2 396588.Tgr7_3019 1.161e-230 721.0 COG0493@1|root,COG0493@2|Bacteria,1MU2H@1224|Proteobacteria,1RMY7@1236|Gammaproteobacteria,1WXP7@135613|Chromatiales 135613|Chromatiales C Pyridine nucleotide-disulphide oxidoreductase - - 1.4.1.13,1.4.1.14 ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 - R00093,R00114,R00248 RC00006,RC00010,RC02799 ko00000,ko00001,ko01000 - - - Fer4_20,Pyr_redox_2 QTD1_k127_1749089_0 1122604.JONR01000010_gene3947 0.0 1416.0 COG0067@1|root,COG0069@1|root,COG0067@2|Bacteria,COG0069@2|Bacteria,1MU7B@1224|Proteobacteria,1RN2W@1236|Gammaproteobacteria,1X465@135614|Xanthomonadales 135614|Xanthomonadales E Glutamate synthase gltB - 1.4.1.13,1.4.1.14 ko:K00265 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 - R00093,R00114,R00248 RC00006,RC00010,RC02799 ko00000,ko00001,ko01000 - - - GATase_2,GXGXG,Glu_syn_central,Glu_synthase QTD1_k127_1766488_2 1097668.BYI23_B006060 3.506e-22 101.0 COG2010@1|root,COG2010@2|Bacteria,1N8E4@1224|Proteobacteria,2VWFV@28216|Betaproteobacteria,1K82X@119060|Burkholderiaceae 28216|Betaproteobacteria C Cytochrome c - - - - - - - - - - - - - QTD1_k127_1766488_0 392499.Swit_0921 5.01e-159 532.0 COG4773@1|root,COG4773@2|Bacteria,1R4DT@1224|Proteobacteria,2TYEM@28211|Alphaproteobacteria,2KEKY@204457|Sphingomonadales 204457|Sphingomonadales P TonB dependent receptor - - - - - - - - - - - - Plug,TonB_dep_Rec QTD1_k127_1766488_1 543728.Vapar_5896 8.855e-45 165.0 COG1529@1|root,COG1529@2|Bacteria,1QTTJ@1224|Proteobacteria,2VHB9@28216|Betaproteobacteria 28216|Betaproteobacteria C Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding - - 1.3.99.16 ko:K00256,ko:K07303 - - - - ko00000,ko01000 - - - Ald_Xan_dh_C,Ald_Xan_dh_C2 QTD1_k127_1824217_1 153496.JNAB01000002_gene1478 6.114e-43 164.0 COG4133@1|root,COG4133@2|Bacteria,1MZPC@1224|Proteobacteria,2TVBT@28211|Alphaproteobacteria,2JTHH@204441|Rhodospirillales 204441|Rhodospirillales O once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system ccmA - 3.6.3.41 ko:K02193 ko02010,map02010 M00259 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.107 - - ABC_tran QTD1_k127_1824217_2 1280946.HY29_06275 2.401e-23 111.0 2DPYS@1|root,33403@2|Bacteria,1N637@1224|Proteobacteria,2UEN9@28211|Alphaproteobacteria 28211|Alphaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_1824217_0 1123073.KB899241_gene3502 7.816e-278 868.0 COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,1RMBN@1236|Gammaproteobacteria,1X5MD@135614|Xanthomonadales 135614|Xanthomonadales V AcrB/AcrD/AcrF family - - - - - - - - - - - - ACR_tran QTD1_k127_1834282_9 2340.JV46_14340 1.106e-15 86.0 2C9YT@1|root,31Z2V@2|Bacteria,1RHIU@1224|Proteobacteria,1S6G3@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_1834282_4 1089544.KB912942_gene1763 1.696e-134 451.0 COG1392@1|root,COG1392@2|Bacteria 2|Bacteria P Protein of unknown function DUF47 - - - ko:K07220 - - - - ko00000 - - - PhoU_div QTD1_k127_1834282_1 1089544.KB912942_gene1762 4.927e-151 494.0 COG0574@1|root,COG1080@1|root,COG0574@2|Bacteria,COG1080@2|Bacteria,2GK73@201174|Actinobacteria,4E0F3@85010|Pseudonocardiales 201174|Actinobacteria G PEP-utilising enzyme, mobile domain ppdK - 2.7.9.1 ko:K01006 ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200 M00169,M00171,M00172,M00173 R00206 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000 - - - PEP-utilizers,PEP-utilizers_C,PPDK_N QTD1_k127_1834282_5 290397.Adeh_1659 4.724e-133 439.0 COG3005@1|root,COG3005@2|Bacteria,1R956@1224|Proteobacteria,42Q0X@68525|delta/epsilon subdivisions,2WMHI@28221|Deltaproteobacteria 28221|Deltaproteobacteria C NapC/NirT cytochrome c family, N-terminal region - GO:0003674,GO:0003824,GO:0005575,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0031224,GO:0044237,GO:0044425,GO:0045333,GO:0055114 - - - - - - - - - - Cytochrom_NNT QTD1_k127_1834282_2 452637.Oter_2603 9.506e-140 471.0 COG2864@1|root,COG2864@2|Bacteria 2|Bacteria C formate dehydrogenase cbcY - - - - - - - - - - - Cytochrom_c3_2,Cytochrome_C7,Ni_hydr_CYTB,Paired_CXXCH_1,Rhodanese QTD1_k127_1834282_10 1231241.Mc24_05845 3.517e-13 79.0 COG0517@1|root,COG0517@2|Bacteria 2|Bacteria S IMP dehydrogenase activity - - - ko:K04767 - - - - ko00000 - - - CBS QTD1_k127_1834282_6 640081.Dsui_1146 2.55e-83 285.0 COG2042@1|root,COG3376@2|Bacteria,1MUYH@1224|Proteobacteria,2VJDC@28216|Betaproteobacteria,2KYK1@206389|Rhodocyclales 206389|Rhodocyclales P High-affinity nickel-transport protein - - - ko:K07241 - - - - ko00000,ko02000 2.A.52.1 - - NicO QTD1_k127_1834282_11 216595.PFLU_1891 6.092e-12 72.0 COG2010@1|root,COG2993@1|root,COG2010@2|Bacteria,COG2993@2|Bacteria,1MXEY@1224|Proteobacteria 1224|Proteobacteria C COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit - - - ko:K00405 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 - - ko00000,ko00001,ko00002 3.D.4.3 - - Cytochrome_CBB3,FixO QTD1_k127_1834282_8 1304888.ATWF01000001_gene2431 3.995e-30 128.0 COG0680@1|root,COG0680@2|Bacteria,2GFQF@200930|Deferribacteres 200930|Deferribacteres C Hydrogenase maturation protease - - - ko:K03605 - - - - ko00000,ko01000,ko01002 - - - HycI QTD1_k127_1834282_7 1232410.KI421412_gene145 5.106e-51 191.0 COG1969@1|root,COG1969@2|Bacteria,1MU87@1224|Proteobacteria,42NQ3@68525|delta/epsilon subdivisions,2X8MJ@28221|Deltaproteobacteria,43TMS@69541|Desulfuromonadales 28221|Deltaproteobacteria C Domain of unknown function (DUF4405) - - - - - - - - - - - - Ni_hydr_CYTB QTD1_k127_1834282_0 398767.Glov_2055 1.061e-250 784.0 COG0374@1|root,COG0374@2|Bacteria,1MWFJ@1224|Proteobacteria,42M4S@68525|delta/epsilon subdivisions,2WJQS@28221|Deltaproteobacteria 28221|Deltaproteobacteria C Belongs to the NiFe NiFeSe hydrogenase large subunit family hyaL - 1.12.99.6 ko:K06281 ko00633,ko01120,map00633,map01120 - R08034 RC00250 ko00000,ko00001,ko01000 - - - NiFeSe_Hases QTD1_k127_1834282_3 1125863.JAFN01000001_gene3576 2.846e-135 440.0 COG1740@1|root,COG1740@2|Bacteria,1MWAC@1224|Proteobacteria,42MI0@68525|delta/epsilon subdivisions,2WIW4@28221|Deltaproteobacteria 28221|Deltaproteobacteria C TIGRFAM hydrogenase (NiFe) small subunit (hydA) hyaS - 1.12.2.1,1.12.99.6 ko:K06282,ko:K18008 ko00633,ko01120,map00633,map01120 - R08034 RC00250 ko00000,ko00001,ko01000 - - iAF987.Gmet_3332 NiFe_hyd_SSU_C,Oxidored_q6,TAT_signal QTD1_k127_1877877_4 402626.Rpic_0181 1.071e-09 61.0 COG0583@1|root,COG0583@2|Bacteria,1MWY0@1224|Proteobacteria,2VNSF@28216|Betaproteobacteria,1KGR1@119060|Burkholderiaceae 28216|Betaproteobacteria K Transcriptional regulator - - - ko:K03566 ko02026,map02026 - - - ko00000,ko00001,ko03000 - - - HTH_1,LysR_substrate QTD1_k127_1877877_3 1123261.AXDW01000004_gene2806 7.452e-25 111.0 COG1309@1|root,COG1309@2|Bacteria,1N6TK@1224|Proteobacteria,1SCNY@1236|Gammaproteobacteria,1X8B0@135614|Xanthomonadales 135614|Xanthomonadales K Bacterial regulatory proteins, tetR family - - - - - - - - - - - - TetR_N QTD1_k127_1877877_0 640511.BC1002_4996 5.098e-146 480.0 COG1538@1|root,COG1538@2|Bacteria,1MUA8@1224|Proteobacteria,2VHFP@28216|Betaproteobacteria,1K0RB@119060|Burkholderiaceae 28216|Betaproteobacteria M TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family - - - - - - - - - - - - OEP QTD1_k127_1877877_2 391038.Bphy_2410 4.637e-131 438.0 COG0845@1|root,COG0845@2|Bacteria,1MUFW@1224|Proteobacteria,2VKCK@28216|Betaproteobacteria,1K367@119060|Burkholderiaceae 28216|Betaproteobacteria M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - HlyD_D23 QTD1_k127_1877877_1 1472716.KBK24_0101300 5.525e-142 456.0 COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2VHFI@28216|Betaproteobacteria,1K4D2@119060|Burkholderiaceae 28216|Betaproteobacteria V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - ko:K18138 ko01501,ko01503,map01501,map01503 M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000 2.A.6.2 - - ACR_tran QTD1_k127_1908786_5 318996.AXAZ01000008_gene4137 1.536e-78 263.0 COG3832@1|root,COG3832@2|Bacteria,1RCZK@1224|Proteobacteria,2TV1V@28211|Alphaproteobacteria,3JUK6@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria S Activator of Hsp90 ATPase homolog 1-like protein MA20_15105 - - - - - - - - - - - AHSA1 QTD1_k127_1908786_7 1267535.KB906767_gene5521 1.501e-27 120.0 COG1678@1|root,COG1678@2|Bacteria,3Y8TX@57723|Acidobacteria 57723|Acidobacteria K Uncharacterized ACR, COG1678 - - - - - - - - - - - - DUF179 QTD1_k127_1908786_3 84531.JMTZ01000011_gene3105 6.787e-119 400.0 COG0738@1|root,COG0738@2|Bacteria,1Q64C@1224|Proteobacteria,1RQG1@1236|Gammaproteobacteria,1X58N@135614|Xanthomonadales 135614|Xanthomonadales G Major Facilitator Superfamily - - - - - - - - - - - - MFS_1 QTD1_k127_1908786_2 864051.BurJ1DRAFT_4906 2.964e-120 406.0 COG3552@1|root,COG3552@2|Bacteria,1MUHH@1224|Proteobacteria,2VNH5@28216|Betaproteobacteria,1KN9G@119065|unclassified Burkholderiales 28216|Betaproteobacteria S VWA domain containing CoxE-like protein coxE - - ko:K07161 - - - - ko00000 - - - VWA_CoxE QTD1_k127_1908786_1 983917.RGE_39270 1.755e-129 419.0 COG0714@1|root,COG0714@2|Bacteria,1MV5I@1224|Proteobacteria,2VIJR@28216|Betaproteobacteria,1KPGK@119065|unclassified Burkholderiales 28216|Betaproteobacteria O AAA domain (dynein-related subfamily) coxD - - - - - - - - - - - AAA_5 QTD1_k127_1908786_4 1123072.AUDH01000003_gene808 4.788e-93 313.0 COG1319@1|root,COG1319@2|Bacteria,1MUDB@1224|Proteobacteria,2TRA8@28211|Alphaproteobacteria,2JQRH@204441|Rhodospirillales 204441|Rhodospirillales C CO dehydrogenase flavoprotein C-terminal domain - - 1.2.5.3 ko:K03519 - - R11168 RC02800 ko00000,ko01000 - - - CO_deh_flav_C,FAD_binding_5 QTD1_k127_1908786_0 381666.H16_A0438 0.0 1249.0 COG1529@1|root,COG1529@2|Bacteria,1MUEA@1224|Proteobacteria,2VIR8@28216|Betaproteobacteria,1K1ZS@119060|Burkholderiaceae 28216|Betaproteobacteria C Aldehyde oxidase and xanthine dehydrogenase coxL - 1.2.5.3 ko:K03520 - - R11168 RC02800 ko00000,ko01000 - - - Ald_Xan_dh_C,Ald_Xan_dh_C2 QTD1_k127_1908786_6 983917.RGE_39240 2.866e-49 177.0 COG2080@1|root,COG2080@2|Bacteria,1RD8C@1224|Proteobacteria,2VQ75@28216|Betaproteobacteria,1KNM2@119065|unclassified Burkholderiales 28216|Betaproteobacteria C [2Fe-2S] binding domain coxS - 1.2.5.3 ko:K03518 - - R11168 RC02800 ko00000,ko01000 - - - Fer2,Fer2_2 QTD1_k127_1960706_12 1449976.KALB_1292 1.007e-06 54.0 COG4934@1|root,COG4934@2|Bacteria,2GMZ8@201174|Actinobacteria,4E8YH@85010|Pseudonocardiales 201174|Actinobacteria O Pro-kumamolisin, activation domain - - - ko:K08677 - - - - ko00000,ko01002 - - - He_PIG,Peptidase_S8,Pro-kuma_activ QTD1_k127_1960706_9 398767.Glov_2442 6.079e-44 173.0 COG2199@1|root,COG3706@2|Bacteria,1R7HC@1224|Proteobacteria,43BSG@68525|delta/epsilon subdivisions,2WN9P@28221|Deltaproteobacteria 28221|Deltaproteobacteria T GGDEF domain - - - - - - - - - - - - GGDEF,Response_reg QTD1_k127_1960706_10 1449049.JONW01000006_gene2762 7.717e-26 116.0 COG2867@1|root,COG2867@2|Bacteria 2|Bacteria I negative regulation of translational initiation - - - - - - - - - - - - Polyketide_cyc,Polyketide_cyc2,START QTD1_k127_1960706_2 1229205.BUPH_00701 9.608e-126 411.0 COG3938@1|root,COG3938@2|Bacteria,1NVF9@1224|Proteobacteria,2VHHY@28216|Betaproteobacteria,1K4R9@119060|Burkholderiaceae 28216|Betaproteobacteria E Belongs to the proline racemase family - GO:0003674,GO:0003824,GO:0016853,GO:0016854,GO:0016855,GO:0036361,GO:0047580,GO:0047661 5.1.1.8 ko:K12658 ko00330,map00330 - R03296 RC00479 ko00000,ko00001,ko01000 - - - Pro_racemase QTD1_k127_1960706_3 59538.XP_005961362.1 8.529e-124 406.0 COG0329@1|root,2SG3E@2759|Eukaryota,3ADVK@33154|Opisthokonta 33154|Opisthokonta EM Dihydrodipicolinate synthetase family - - - - - - - - - - - - DHDPS QTD1_k127_1960706_6 344747.PM8797T_25191 2.535e-60 214.0 COG3565@1|root,COG3565@2|Bacteria 2|Bacteria S Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - ko:K06991 - - - - ko00000 - - - Glyoxalase QTD1_k127_1960706_0 1163409.UUA_15001 0.0 1013.0 COG2234@1|root,COG2234@2|Bacteria,1R6BQ@1224|Proteobacteria,1RXCV@1236|Gammaproteobacteria,1X4AN@135614|Xanthomonadales 135614|Xanthomonadales S Transferrin receptor-like dimerisation domain - - 3.4.17.21 ko:K01301 - - - - ko00000,ko01000,ko01002 - - - PA,Peptidase_M28,TFR_dimer QTD1_k127_1960706_1 1134474.O59_003419 1.234e-148 477.0 COG0715@1|root,COG0715@2|Bacteria,1RKKF@1224|Proteobacteria 1224|Proteobacteria P NMT1-like family - - - ko:K02051 - M00188 - - ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 - - NMT1_2 QTD1_k127_1960706_7 1198452.Jab_2c16060 1.014e-55 201.0 COG1999@1|root,COG1999@2|Bacteria,1RHJ8@1224|Proteobacteria,2VR3M@28216|Betaproteobacteria,477BU@75682|Oxalobacteraceae 28216|Betaproteobacteria S SCO1/SenC - - - ko:K07152 - - - - ko00000,ko03029 - - - SCO1-SenC QTD1_k127_1960706_8 296591.Bpro_2934 4.537e-47 173.0 COG3794@1|root,COG3794@2|Bacteria,1NX9E@1224|Proteobacteria 1224|Proteobacteria C PFAM blue (type 1) copper domain protein - - - - - - - - - - - - - QTD1_k127_1960706_4 1198452.Jab_2c16080 1.644e-116 389.0 COG0600@1|root,COG0600@2|Bacteria,1MWS0@1224|Proteobacteria,2VJ3H@28216|Betaproteobacteria,476TV@75682|Oxalobacteraceae 28216|Betaproteobacteria P Binding-protein-dependent transport system inner membrane component tauC - - ko:K02050,ko:K15552,ko:K15554 ko00920,ko02010,map00920,map02010 M00188,M00435,M00436 - - ko00000,ko00001,ko00002,ko02000 3.A.1.16,3.A.1.17,3.A.1.17.1,3.A.1.17.2,3.A.1.17.4 - - BPD_transp_1 QTD1_k127_1960706_5 296591.Bpro_2936 3.152e-106 350.0 COG1116@1|root,COG1116@2|Bacteria,1MUDV@1224|Proteobacteria,2VHKA@28216|Betaproteobacteria 28216|Betaproteobacteria P Abc transporter - - - ko:K02049 - M00188 - - ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 - - AAA_assoc_C,ABC_tran QTD1_k127_1960706_11 1280953.HOC_07784 1.13e-22 104.0 COG5430@1|root,COG5430@2|Bacteria,1MZNQ@1224|Proteobacteria,2UCS1@28211|Alphaproteobacteria 28211|Alphaproteobacteria S Secreted protein - - - - - - - - - - - - SCPU QTD1_k127_1979151_1 1123257.AUFV01000007_gene148 2.615e-254 792.0 COG0465@1|root,COG0465@2|Bacteria,1MU6J@1224|Proteobacteria,1RME8@1236|Gammaproteobacteria,1X3EG@135614|Xanthomonadales 135614|Xanthomonadales O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins ftsH - - ko:K03798 - M00742 - - ko00000,ko00002,ko01000,ko01002,ko03110 - - - AAA,FtsH_ext,Peptidase_M41 QTD1_k127_1979151_2 519989.ECTPHS_07007 9.049e-73 253.0 COG0293@1|root,COG0293@2|Bacteria,1MW1C@1224|Proteobacteria,1RN5M@1236|Gammaproteobacteria,1WX98@135613|Chromatiales 135613|Chromatiales J Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit ftsJ - 2.1.1.166 ko:K02427 - - - - ko00000,ko01000,ko03009 - - - FtsJ QTD1_k127_1979151_4 1279019.ARQK01000036_gene1646 1.4e-21 102.0 COG1534@1|root,COG1534@2|Bacteria,1N8K5@1224|Proteobacteria,1SDIM@1236|Gammaproteobacteria,1WYSK@135613|Chromatiales 135613|Chromatiales J CRS1_YhbY - - - ko:K07574 - - - - ko00000,ko03009 - - - CRS1_YhbY QTD1_k127_1979151_3 1260251.SPISAL_03060 7.235e-63 220.0 COG0782@1|root,COG0782@2|Bacteria,1RCXW@1224|Proteobacteria,1S3UP@1236|Gammaproteobacteria,1WY5U@135613|Chromatiales 135613|Chromatiales K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides greA - - ko:K03624 - - - - ko00000,ko03021 - - - GreA_GreB,GreA_GreB_N QTD1_k127_1979151_0 2340.JV46_05960 0.0 1109.0 COG0458@1|root,COG0458@2|Bacteria,1MUDZ@1224|Proteobacteria,1RPIU@1236|Gammaproteobacteria,1J5E8@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria F Carbamoyl-phosphate synthetase ammonia chain carB GO:0000050,GO:0000166,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005951,GO:0006082,GO:0006139,GO:0006206,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016053,GO:0016597,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046394,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - iAF1260.b0033,iBWG_1329.BWG_0031,iECDH10B_1368.ECDH10B_0034,iECDH1ME8569_1439.ECDH1ME8569_0031,iECUMN_1333.ECUMN_0034,iEcDH1_1363.EcDH1_3566,iJN746.PP_4723,iJO1366.b0033,iJR904.b0033,iPC815.YPO0482,iY75_1357.Y75_RS00170,iYL1228.KPN_00041 CPSase_L_D2,CPSase_L_D3,MGS QTD1_k127_1988527_1 1123073.KB899241_gene2929 1.374e-221 690.0 COG0243@1|root,COG3383@1|root,COG0243@2|Bacteria,COG3383@2|Bacteria,1MW3N@1224|Proteobacteria,1RN6N@1236|Gammaproteobacteria,1XCEY@135614|Xanthomonadales 135614|Xanthomonadales C Molydopterin dinucleotide binding domain - - 1.17.1.9 ko:K00123 ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200 - R00519 RC02796 ko00000,ko00001,ko01000 - - - Molybdop_Fe4S4,Molybdopterin,Molydop_binding QTD1_k127_1988527_5 762376.AXYL_00320 2.136e-159 505.0 COG0437@1|root,COG0437@2|Bacteria,1MU1B@1224|Proteobacteria,2VHPC@28216|Betaproteobacteria,3T39P@506|Alcaligenaceae 28216|Betaproteobacteria C formate dehydrogenase fdoH - - ko:K00124 ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200 - R00519 RC02796 ko00000,ko00001 - - - Fer4_11,Fer4_4,Fer4_7,Form-deh_trans QTD1_k127_1988527_8 360910.BAV3145 1.654e-89 299.0 COG2864@1|root,COG2864@2|Bacteria,1MXFQ@1224|Proteobacteria,2VKTA@28216|Betaproteobacteria,3T8ZA@506|Alcaligenaceae 28216|Betaproteobacteria C Prokaryotic cytochrome b561 fdoI - - ko:K00127 ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200 - R00519 RC02796 ko00000,ko00001 - - - Ni_hydr_CYTB QTD1_k127_1988527_9 123899.JPQP01000003_gene1478 2.386e-82 284.0 COG3058@1|root,COG3058@2|Bacteria,1NK06@1224|Proteobacteria,2VJ30@28216|Betaproteobacteria,3T1XG@506|Alcaligenaceae 28216|Betaproteobacteria O Necessary for formate dehydrogenase activity fdhE - - ko:K02380 - - - - ko00000 - - - FdhE QTD1_k127_1988527_4 1123073.KB899241_gene2937 1.101e-177 569.0 COG1921@1|root,COG1921@2|Bacteria,1MWXI@1224|Proteobacteria,1RN73@1236|Gammaproteobacteria,1X6U6@135614|Xanthomonadales 135614|Xanthomonadales H Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis selA - 2.9.1.1 ko:K01042 ko00450,ko00970,map00450,map00970 - R08219 RC01246 ko00000,ko00001,ko01000 - - - Se-cys_synth_N,SelA QTD1_k127_1988527_0 1123073.KB899241_gene2938 1.857e-223 710.0 COG3276@1|root,COG3276@2|Bacteria,1MWXH@1224|Proteobacteria,1RQJI@1236|Gammaproteobacteria,1X7NN@135614|Xanthomonadales 135614|Xanthomonadales J Elongation factor SelB, winged helix - - - ko:K03833 - - - - ko00000,ko03012 - - - GTP_EFTU,GTP_EFTU_D2,SelB-wing_2,SelB-wing_3 QTD1_k127_1988527_6 1286093.C266_24543 9.511e-151 486.0 COG0709@1|root,COG0709@2|Bacteria,1MWFG@1224|Proteobacteria,2VJSD@28216|Betaproteobacteria,1K0WI@119060|Burkholderiaceae 28216|Betaproteobacteria H Synthesizes selenophosphate from selenide and ATP selD - 2.7.9.3 ko:K01008 ko00450,ko01100,map00450,map01100 - R03595 RC00002,RC02878 ko00000,ko00001,ko01000,ko03016 - - - AIRS,AIRS_C QTD1_k127_1988527_11 396588.Tgr7_1906 1.755e-61 216.0 COG0558@1|root,COG0558@2|Bacteria,1RCZ7@1224|Proteobacteria,1S465@1236|Gammaproteobacteria,1WXKW@135613|Chromatiales 135613|Chromatiales I Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - 2.7.8.41,2.7.8.5 ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 - R01801,R02030 RC00002,RC00017,RC02795 ko00000,ko00001,ko01000 - - - CDP-OH_P_transf QTD1_k127_1988527_2 1266914.ATUK01000010_gene1092 2.154e-201 644.0 COG0322@1|root,COG0322@2|Bacteria,1MV38@1224|Proteobacteria,1RNGV@1236|Gammaproteobacteria,1WWEF@135613|Chromatiales 135613|Chromatiales L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision uvrC - - ko:K03703 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - GIY-YIG,HHH_2,HHH_5,UVR,UvrC_HhH_N QTD1_k127_1988527_10 713587.THITH_07695 1.733e-70 258.0 COG1573@1|root,COG1573@2|Bacteria,1MW91@1224|Proteobacteria,1S2B6@1236|Gammaproteobacteria,1X0E4@135613|Chromatiales 135613|Chromatiales L Uracil DNA glycosylase superfamily - - 3.2.2.27 ko:K21929 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - UDG QTD1_k127_1988527_3 1384054.N790_03185 4.078e-190 604.0 COG3200@1|root,COG3200@2|Bacteria,1MUWF@1224|Proteobacteria,1RRMM@1236|Gammaproteobacteria,1X2YX@135614|Xanthomonadales 135614|Xanthomonadales E phospho-2-dehydro-3-deoxyheptonate aldolase dhs1 - 2.5.1.54 ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 M00022 R01826 RC00435 ko00000,ko00001,ko00002,ko01000 - - - DAHP_synth_2 QTD1_k127_1988527_7 1408445.JHXP01000004_gene766 2.355e-112 371.0 COG1748@1|root,COG1748@2|Bacteria,1MY1G@1224|Proteobacteria,1RRUZ@1236|Gammaproteobacteria,1JD4N@118969|Legionellales 118969|Legionellales E Saccharopine dehydrogenase C-terminal domain lysDH - - - - - - - - - - - Sacchrp_dh_C,Sacchrp_dh_NADP QTD1_k127_1994393_4 1163409.UUA_17717 6.501e-129 422.0 COG1629@1|root,COG4206@1|root,COG1629@2|Bacteria,COG4206@2|Bacteria,1MXVP@1224|Proteobacteria,1RS4C@1236|Gammaproteobacteria,1X4VU@135614|Xanthomonadales 135614|Xanthomonadales HP TonB-dependent receptor - - - - - - - - - - - - Plug,TonB_dep_Rec QTD1_k127_1994393_1 935863.AWZR01000006_gene1407 3.788e-148 494.0 COG0557@1|root,COG0557@2|Bacteria,1MUS6@1224|Proteobacteria,1RMQE@1236|Gammaproteobacteria,1X3WG@135614|Xanthomonadales 135614|Xanthomonadales J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs rnr - - ko:K12573 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03016,ko03019 - - - OB_RNB,RNB,S1 QTD1_k127_1994393_5 1179778.PMM47T1_11032 1.851e-71 249.0 COG0566@1|root,COG0566@2|Bacteria,1MWCM@1224|Proteobacteria,1RN2F@1236|Gammaproteobacteria 1236|Gammaproteobacteria J Specifically methylates the ribose of guanosine 2251 in 23S rRNA rlmB GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 ko:K03218 - - - - ko00000,ko01000,ko03009 - - - SpoU_methylase,SpoU_sub_bind QTD1_k127_1994393_0 1116369.KB890024_gene2253 4.688e-196 617.0 COG1960@1|root,COG1960@2|Bacteria,1MU2V@1224|Proteobacteria,2TSK3@28211|Alphaproteobacteria,43JDZ@69277|Phyllobacteriaceae 28211|Alphaproteobacteria I acyl-CoA dehydrogenase MA20_26760 - 1.3.8.7 ko:K00249 ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320 M00013,M00036,M00087 R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754 RC00052,RC00068,RC00076,RC00095,RC00148,RC00246 ko00000,ko00001,ko00002,ko01000 - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N QTD1_k127_1994393_2 1123367.C666_11180 4.314e-146 473.0 COG3173@1|root,COG3173@2|Bacteria,1MWAK@1224|Proteobacteria,2VJ31@28216|Betaproteobacteria 28216|Betaproteobacteria S Aminoglycoside phosphotransferase - - - - - - - - - - - - APH QTD1_k127_1994393_6 1158146.KB907122_gene368 3.038e-49 179.0 COG0360@1|root,COG0360@2|Bacteria,1RH82@1224|Proteobacteria,1S5VU@1236|Gammaproteobacteria,1WYA2@135613|Chromatiales 135613|Chromatiales J Binds together with S18 to 16S ribosomal RNA rpsF - - ko:K02990 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011,ko03029 - - - Ribosomal_S6 QTD1_k127_1994393_8 1042375.AFPL01000008_gene3306 1.851e-34 133.0 COG0238@1|root,COG0238@2|Bacteria,1MZ8U@1224|Proteobacteria,1S8R8@1236|Gammaproteobacteria,467T8@72275|Alteromonadaceae 1236|Gammaproteobacteria J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit rpsR GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02963 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S18 QTD1_k127_1994393_7 1158182.KB905031_gene2451 1.996e-46 176.0 COG0359@1|root,COG0359@2|Bacteria,1RD0R@1224|Proteobacteria,1S3WS@1236|Gammaproteobacteria,1WYD2@135613|Chromatiales 135613|Chromatiales J binds to the 23S rRNA rplI - - ko:K02939 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L9_C,Ribosomal_L9_N QTD1_k127_1994393_3 1260251.SPISAL_02805 2.041e-133 435.0 COG0305@1|root,COG0305@2|Bacteria,1MUG9@1224|Proteobacteria,1RPM2@1236|Gammaproteobacteria,1WW1X@135613|Chromatiales 135613|Chromatiales L it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins - - 3.6.4.12 ko:K02314 ko03030,ko04112,map03030,map04112 - - - ko00000,ko00001,ko01000,ko03032 - - - DnaB,DnaB_C,Intein_splicing,LAGLIDADG_3 QTD1_k127_1997588_2 1168059.KB899087_gene4381 2.17e-220 688.0 COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,3EYAA@335928|Xanthobacteraceae 28211|Alphaproteobacteria C Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid betB - 1.2.1.8 ko:K00130 ko00260,ko01100,map00260,map01100 M00555 R02565,R02566 RC00080 ko00000,ko00001,ko00002,ko01000 - - - Aldedh QTD1_k127_1997588_0 1125973.JNLC01000013_gene3900 3.653e-275 854.0 COG2303@1|root,COG2303@2|Bacteria,1MV19@1224|Proteobacteria,2TQKQ@28211|Alphaproteobacteria,3JWT5@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria E GMC oxidoreductase betA - 1.1.99.1 ko:K00108 ko00260,ko01100,map00260,map01100 M00555 R01025 RC00087 ko00000,ko00001,ko00002,ko01000 - - - GMC_oxred_C,GMC_oxred_N QTD1_k127_1997588_1 1112214.AHIS01000095_gene708 3.707e-227 736.0 COG1629@1|root,COG4771@2|Bacteria,1QV5Q@1224|Proteobacteria,2TWAA@28211|Alphaproteobacteria,2KEDH@204457|Sphingomonadales 204457|Sphingomonadales P TonB-dependent Receptor Plug Domain - - - - - - - - - - - - Plug,TonB_dep_Rec QTD1_k127_1997588_3 1125973.JNLC01000013_gene3910 1.759e-128 419.0 COG4977@1|root,COG4977@2|Bacteria,1NRX7@1224|Proteobacteria,2TSHD@28211|Alphaproteobacteria,3JVT0@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria K DJ-1/PfpI family - - - - - - - - - - - - DJ-1_PfpI,HTH_18 QTD1_k127_1997588_4 398767.Glov_2442 5.293e-40 167.0 COG2199@1|root,COG3706@2|Bacteria,1R7HC@1224|Proteobacteria,43BSG@68525|delta/epsilon subdivisions,2WN9P@28221|Deltaproteobacteria 28221|Deltaproteobacteria T GGDEF domain - - - - - - - - - - - - GGDEF,Response_reg QTD1_k127_1997588_7 391625.PPSIR1_23494 2.357e-05 57.0 COG2062@1|root,COG2062@2|Bacteria 2|Bacteria T phosphohistidine phosphatase, SixA - - - - - - - - - - - - His_Phos_1 QTD1_k127_1997588_5 608534.GCWU000341_01599 6.486e-30 124.0 COG1225@1|root,COG1225@2|Bacteria,1V3N5@1239|Firmicutes,24HP8@186801|Clostridia,2PS8Z@265975|Oribacterium 186801|Clostridia O Antioxidant, AhpC TSA family bcp - 1.11.1.15 ko:K03564 - - - - ko00000,ko01000 - - - AhpC-TSA QTD1_k127_1997588_8 545696.HOLDEFILI_02195 0.0003133 43.0 COG1605@1|root,COG1605@2|Bacteria 2|Bacteria E Chorismate mutase aroK - 1.1.1.25,2.7.1.71,5.4.99.5 ko:K00014,ko:K00891,ko:K04092,ko:K04516 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022,M00024,M00025 R01715,R02412,R02413 RC00002,RC00078,RC00206,RC03116 ko00000,ko00001,ko00002,ko01000 - - - CM_2,SKI QTD1_k127_1997588_6 765913.ThidrDRAFT_0989 1.141e-06 55.0 COG0582@1|root,COG0582@2|Bacteria,1MWBN@1224|Proteobacteria,1RPD0@1236|Gammaproteobacteria,1WYV7@135613|Chromatiales 135613|Chromatiales L Belongs to the 'phage' integrase family - - - - - - - - - - - - Phage_integrase QTD1_k127_2003193_3 391625.PPSIR1_22374 2.5e-110 372.0 COG0531@1|root,COG0531@2|Bacteria,1MXNJ@1224|Proteobacteria,42MGQ@68525|delta/epsilon subdivisions,2WSUN@28221|Deltaproteobacteria 28221|Deltaproteobacteria E PFAM amino acid permease-associated region - - - ko:K03294 - - - - ko00000 2.A.3.2 - - AA_permease_2 QTD1_k127_2003193_1 1161401.ASJA01000001_gene295 3.885e-122 409.0 COG0477@1|root,COG2814@2|Bacteria,1MVSH@1224|Proteobacteria,2TUEW@28211|Alphaproteobacteria,43WI7@69657|Hyphomonadaceae 28211|Alphaproteobacteria EGP COG0477 Permeases of the major facilitator superfamily tetA - - ko:K08151 - M00668 - - ko00000,ko00002,ko01504,ko02000 2.A.1.2.38,2.A.1.2.39,2.A.1.2.4,2.A.1.2.41,2.A.1.2.68,2.A.1.2.75 - - MFS_1,Sugar_tr QTD1_k127_2003193_0 1122604.JONR01000013_gene3243 4.139e-136 443.0 COG3511@1|root,COG3511@2|Bacteria,1R78F@1224|Proteobacteria,1S2GR@1236|Gammaproteobacteria,1X929@135614|Xanthomonadales 135614|Xanthomonadales M Phosphoesterase family - - - - - - - - - - - - Phosphoesterase QTD1_k127_2003193_7 1163407.UU7_08875 1.272e-22 110.0 2AMRT@1|root,31CN4@2|Bacteria,1P9M2@1224|Proteobacteria,1TASG@1236|Gammaproteobacteria,1X8XC@135614|Xanthomonadales 135614|Xanthomonadales - - - - - - - - - - - - - - - QTD1_k127_2003193_6 748247.AZKH_1523 1.639e-32 133.0 COG1846@1|root,COG1846@2|Bacteria,1N7BV@1224|Proteobacteria,2VU53@28216|Betaproteobacteria,2KX8Y@206389|Rhodocyclales 206389|Rhodocyclales K helix_turn_helix multiple antibiotic resistance protein - - - - - - - - - - - - MarR QTD1_k127_2003193_4 748247.AZKH_1522 2.379e-104 362.0 COG1538@1|root,COG1538@2|Bacteria,1MUZZ@1224|Proteobacteria,2VH6M@28216|Betaproteobacteria,2KW8S@206389|Rhodocyclales 206389|Rhodocyclales MU Outer membrane efflux protein - - - - - - - - - - - - OEP QTD1_k127_2003193_2 882378.RBRH_03629 6.361e-112 376.0 COG1566@1|root,COG1566@2|Bacteria,1MU7I@1224|Proteobacteria,2VHA2@28216|Betaproteobacteria,1K1X2@119060|Burkholderiaceae 28216|Betaproteobacteria V PFAM secretion protein HlyD family protein emrA - - ko:K03543 - M00701 - - ko00000,ko00002,ko02000 8.A.1.1 - - Biotin_lipoyl_2,HlyD,HlyD_3,HlyD_D23 QTD1_k127_2003193_5 1123060.JONP01000021_gene3770 2.576e-53 194.0 COG1522@1|root,COG1522@2|Bacteria,1RDB3@1224|Proteobacteria,2U580@28211|Alphaproteobacteria,2JZJC@204441|Rhodospirillales 204441|Rhodospirillales K helix_turn_helix ASNC type - - - - - - - - - - - - AsnC_trans_reg,HTH_24 QTD1_k127_2003193_8 1123060.JONP01000021_gene3769 1.741e-13 78.0 2C91B@1|root,33D4Z@2|Bacteria,1N875@1224|Proteobacteria,2UFUE@28211|Alphaproteobacteria,2JXWX@204441|Rhodospirillales 204441|Rhodospirillales - - - - - - - - - - - - - - - QTD1_k127_2060537_3 319003.Bra1253DRAFT_03937 2.942e-75 278.0 COG4307@1|root,COG4307@2|Bacteria,1MXES@1224|Proteobacteria,2U06R@28211|Alphaproteobacteria,3JRXQ@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria S Putative zinc-binding metallo-peptidase - - - - - - - - - - - - Peptidase_Mx QTD1_k127_2060537_5 1122222.AXWR01000002_gene2198 5.682e-53 204.0 COG1397@1|root,COG1397@2|Bacteria,1WNF2@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus O ADP-ribosylglycohydrolase - - - - - - - - - - - - ADP_ribosyl_GH QTD1_k127_2060537_6 1120999.JONM01000011_gene1670 5.142e-36 153.0 COG2453@1|root,COG2453@2|Bacteria,1QZXA@1224|Proteobacteria 1224|Proteobacteria T Dual specificity phosphatase, catalytic domain - - - - - - - - - - - - DSPc QTD1_k127_2060537_1 118166.JH976537_gene3567 1.396e-118 387.0 COG0037@1|root,COG0037@2|Bacteria,1G2S7@1117|Cyanobacteria,1H8M3@1150|Oscillatoriales 1117|Cyanobacteria D Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system - - - ko:K14058 - - - - ko00000,ko03016 - - - ATP_bind_3 QTD1_k127_2060537_0 1207063.P24_09621 9.971e-145 475.0 COG2317@1|root,COG2317@2|Bacteria,1MW7T@1224|Proteobacteria,2TSMY@28211|Alphaproteobacteria,2JP9Q@204441|Rhodospirillales 204441|Rhodospirillales E Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues - - 3.4.17.19 ko:K01299 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M32 QTD1_k127_2060537_4 756067.MicvaDRAFT_1478 1.028e-74 268.0 COG0350@1|root,COG2207@1|root,COG0350@2|Bacteria,COG2207@2|Bacteria,1G3BJ@1117|Cyanobacteria,1H9DG@1150|Oscillatoriales 1117|Cyanobacteria L TIGRFAM Methylated-DNA- protein -cysteine S-methyltransferase, DNA binding - - 2.1.1.63 ko:K10778 - - - - ko00000,ko01000,ko03000,ko03400 - - - Ada_Zn_binding,DNA_binding_1,HTH_18,Methyltransf_1N QTD1_k127_2060537_2 880073.Calab_3584 8.455e-94 318.0 COG0297@1|root,COG0297@2|Bacteria,2NQKG@2323|unclassified Bacteria 2|Bacteria G Synthesizes alpha-1,4-glucan chains using ADP-glucose glgA GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 ko:K00703 ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026 M00565 R02421 RC00005 ko00000,ko00001,ko00002,ko01000,ko01003 - GT5 - Glyco_transf_5,Glycos_transf_1 QTD1_k127_2072861_3 572477.Alvin_2173 1.601e-79 273.0 COG0116@1|root,COG1092@1|root,COG0116@2|Bacteria,COG1092@2|Bacteria,1MUQM@1224|Proteobacteria,1RNMH@1236|Gammaproteobacteria,1WW3V@135613|Chromatiales 135613|Chromatiales J Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA rlmL - 2.1.1.173,2.1.1.264 ko:K12297 - - R07234 RC00003 ko00000,ko01000,ko03009 - - - Methyltrans_SAM,THUMP,UPF0020 QTD1_k127_2072861_0 402881.Plav_3501 1.35e-152 488.0 COG0136@1|root,COG0136@2|Bacteria,1MUHG@1224|Proteobacteria,2TSRD@28211|Alphaproteobacteria,1JN9Q@119043|Rhodobiaceae 28211|Alphaproteobacteria E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate asd - 1.2.1.11 ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R02291 RC00684 ko00000,ko00001,ko00002,ko01000 - - - Semialdhyde_dh,Semialdhyde_dhC QTD1_k127_2072861_4 1267533.KB906738_gene2156 2.682e-36 157.0 COG2020@1|root,COG2020@2|Bacteria,3Y55R@57723|Acidobacteria 57723|Acidobacteria O Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - 2.1.1.100 ko:K00587 ko00900,ko01130,map00900,map01130 - R04496 RC00003,RC00460 ko00000,ko00001,ko01000 - - - PEMT QTD1_k127_2072861_1 511062.GU3_12015 8.206e-145 473.0 COG0665@1|root,COG0665@2|Bacteria,1MVGP@1224|Proteobacteria,1RNJ9@1236|Gammaproteobacteria,1Y545@135624|Aeromonadales 135624|Aeromonadales E FAD dependent oxidoreductase - - - ko:K09471 ko00330,ko01100,map00330,map01100 M00136 R07415 RC00062 ko00000,ko00001,ko00002,ko01000 - - - DAO QTD1_k127_2072861_2 1121033.AUCF01000003_gene3316 1.122e-98 326.0 COG2071@1|root,COG2071@2|Bacteria,1MV8E@1224|Proteobacteria,2TSU3@28211|Alphaproteobacteria,2JRWK@204441|Rhodospirillales 204441|Rhodospirillales S Peptidase C26 puuD - - ko:K07010 - - - - ko00000,ko01002 - - - Peptidase_C26 QTD1_k127_2082071_2 28229.ND2E_3536 5.037e-12 70.0 2DSYW@1|root,33HZI@2|Bacteria,1NKP8@1224|Proteobacteria,1SISV@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_2082071_1 472759.Nhal_3902 1.27e-83 284.0 COG2003@1|root,COG2003@2|Bacteria,1MXZ5@1224|Proteobacteria,1RP86@1236|Gammaproteobacteria,1WXFP@135613|Chromatiales 135613|Chromatiales L Belongs to the UPF0758 family - - - ko:K03630 - - - - ko00000 - - - RadC QTD1_k127_2082071_0 1448139.AI20_18710 4.631e-126 412.0 COG0452@1|root,COG0452@2|Bacteria,1MVQP@1224|Proteobacteria,1RMKQ@1236|Gammaproteobacteria,1Y3V3@135624|Aeromonadales 135624|Aeromonadales H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine coaBC - 4.1.1.36,6.3.2.5 ko:K13038 ko00770,ko01100,map00770,map01100 M00120 R03269,R04231 RC00064,RC00090,RC00822 ko00000,ko00001,ko00002,ko01000 - - - DFP,Flavoprotein QTD1_k127_2107052_8 1121127.JAFA01000006_gene5459 4.509e-51 196.0 COG3552@1|root,COG3552@2|Bacteria,1MUHH@1224|Proteobacteria,2VNH5@28216|Betaproteobacteria,1K1YF@119060|Burkholderiaceae 28216|Betaproteobacteria S VWA domain containing CoxE-like protein - - - - - - - - - - - - VWA_CoxE QTD1_k127_2107052_2 196367.JNFG01000011_gene6090 1.033e-126 415.0 COG0714@1|root,COG0714@2|Bacteria,1MV5I@1224|Proteobacteria,2VIJR@28216|Betaproteobacteria,1K34U@119060|Burkholderiaceae 28216|Betaproteobacteria S AAA domain (dynein-related subfamily) - - - - - - - - - - - - AAA_5 QTD1_k127_2107052_9 1218074.BAXZ01000003_gene784 1.323e-50 190.0 COG3427@1|root,COG3427@2|Bacteria,1N4EQ@1224|Proteobacteria,2W4Q9@28216|Betaproteobacteria,1K52T@119060|Burkholderiaceae 28216|Betaproteobacteria S Carbon monoxide dehydrogenase subunit G (CoxG) - - - ko:K09386 - - - - ko00000 - - - COXG QTD1_k127_2107052_1 196367.JNFG01000011_gene6092 0.0 1187.0 COG1529@1|root,COG1529@2|Bacteria,1MUEA@1224|Proteobacteria,2VIR8@28216|Betaproteobacteria,1K4XH@119060|Burkholderiaceae 28216|Betaproteobacteria C Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - 1.2.5.3 ko:K03520 - - R11168 RC02800 ko00000,ko01000 - - - Ald_Xan_dh_C,Ald_Xan_dh_C2 QTD1_k127_2107052_6 1121127.JAFA01000006_gene5455 9.612e-75 256.0 COG2080@1|root,COG2080@2|Bacteria,1RD8C@1224|Proteobacteria,2VQ75@28216|Betaproteobacteria,1K322@119060|Burkholderiaceae 28216|Betaproteobacteria C [2Fe-2S] binding domain - - 1.2.5.3 ko:K03518 - - R11168 RC02800 ko00000,ko01000 - - - Fer2,Fer2_2 QTD1_k127_2107052_3 266265.Bxe_A2144 1.055e-116 381.0 COG1319@1|root,COG1319@2|Bacteria,1MUDB@1224|Proteobacteria,2VSFQ@28216|Betaproteobacteria,1K13T@119060|Burkholderiaceae 28216|Betaproteobacteria C CO dehydrogenase flavoprotein C-terminal domain - - 1.2.5.3 ko:K03519 - - R11168 RC02800 ko00000,ko01000 - - - CO_deh_flav_C,FAD_binding_5 QTD1_k127_2107052_10 365046.Rta_23100 1.511e-30 132.0 2BWTE@1|root,32YDB@2|Bacteria,1N0HE@1224|Proteobacteria,2VYW4@28216|Betaproteobacteria,4AIX9@80864|Comamonadaceae 28216|Betaproteobacteria S Protein of unknown function (DUF2937) - - - - - - - - - - - - DUF2937 QTD1_k127_2107052_0 435908.IDSA_05385 0.0 1309.0 COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,1MX41@1224|Proteobacteria,1RP38@1236|Gammaproteobacteria,2QGPY@267893|Idiomarinaceae 1236|Gammaproteobacteria M Tricorn protease C1 domain - - - ko:K08676 - - - - ko00000,ko01000,ko01002 - - - PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ QTD1_k127_2107052_4 1122604.JONR01000006_gene2749 3.565e-77 275.0 COG0577@1|root,COG0577@2|Bacteria,1MX7X@1224|Proteobacteria,1RRH7@1236|Gammaproteobacteria,1X430@135614|Xanthomonadales 135614|Xanthomonadales V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD QTD1_k127_2107052_5 1123257.AUFV01000005_gene1321 8.721e-77 271.0 COG0577@1|root,COG0577@2|Bacteria,1MWBK@1224|Proteobacteria,1RPZF@1236|Gammaproteobacteria,1X3MX@135614|Xanthomonadales 135614|Xanthomonadales V ABC-type antimicrobial peptide transport system, permease component - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD QTD1_k127_2107052_7 685778.AORL01000021_gene928 2.007e-60 211.0 COG3622@1|root,COG3622@2|Bacteria,1Q6YE@1224|Proteobacteria,2VD26@28211|Alphaproteobacteria,2K3UF@204457|Sphingomonadales 204457|Sphingomonadales G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2 QTD1_k127_2109165_10 1163617.SCD_n01751 3.942e-24 102.0 COG0399@1|root,COG0399@2|Bacteria,1MUPN@1224|Proteobacteria,2VJDZ@28216|Betaproteobacteria 28216|Betaproteobacteria E Belongs to the DegT DnrJ EryC1 family - - - - - - - - - - - - DegT_DnrJ_EryC1 QTD1_k127_2109165_1 522306.CAP2UW1_3295 1.351e-127 417.0 COG0463@1|root,COG0463@2|Bacteria,1MWE5@1224|Proteobacteria,2VJ5G@28216|Betaproteobacteria,1KQBS@119066|unclassified Betaproteobacteria 28216|Betaproteobacteria M Glycosyl transferase family 2 arnC - 2.4.2.53 ko:K10012 ko00520,ko01503,map00520,map01503 M00721,M00761 R07661 RC00005,RC02954 ko00000,ko00001,ko00002,ko01000,ko01005,ko02000 4.D.2.1.8 GT2 - Glycos_transf_2 QTD1_k127_2109165_5 1286093.C266_00220 3.061e-94 318.0 COG0223@1|root,COG0223@2|Bacteria,1MWH1@1224|Proteobacteria,2VKAI@28216|Betaproteobacteria,1K0VV@119060|Burkholderiaceae 28216|Betaproteobacteria J PFAM formyl transferase domain protein pmrIa - 2.1.2.9 ko:K00604 ko00670,ko00970,map00670,map00970 - R03940 RC00026,RC00165 ko00000,ko00001,ko01000 - - - Formyl_trans_C,Formyl_trans_N QTD1_k127_2109165_4 426114.THI_2227 8.388e-110 362.0 COG0726@1|root,COG0726@2|Bacteria,1N8Q4@1224|Proteobacteria,2VKEP@28216|Betaproteobacteria 28216|Betaproteobacteria G polysaccharide deacetylase arnD - - - - - - - - - - - Polysacc_deac_1 QTD1_k127_2109165_8 887062.HGR_04808 1.016e-59 214.0 COG1595@1|root,COG1595@2|Bacteria,1R3SM@1224|Proteobacteria,2VTT2@28216|Betaproteobacteria,4AJ63@80864|Comamonadaceae 28216|Betaproteobacteria K Belongs to the sigma-70 factor family. ECF subfamily - - - - - - - - - - - - Sigma70_r2,Sigma70_r4_2 QTD1_k127_2109165_11 1267535.KB906767_gene1773 9.518e-19 90.0 2E5Q2@1|root,330EP@2|Bacteria,3Y5RC@57723|Acidobacteria,2JK2G@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - QTD1_k127_2109165_2 1244869.H261_03908 9.117e-121 396.0 COG0604@1|root,COG0604@2|Bacteria,1MX8A@1224|Proteobacteria,2TR1J@28211|Alphaproteobacteria,2JPHC@204441|Rhodospirillales 204441|Rhodospirillales C COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - 1.6.5.5 ko:K00344 - - - - ko00000,ko01000 - - - ADH_N,ADH_zinc_N QTD1_k127_2109165_3 314278.NB231_13841 1.068e-116 387.0 COG1398@1|root,COG1398@2|Bacteria,1N2MA@1224|Proteobacteria,1RSN1@1236|Gammaproteobacteria,1WVUQ@135613|Chromatiales 135613|Chromatiales I PFAM Fatty acid desaturase - - 1.14.19.1 ko:K00507 ko01040,ko01212,ko03320,ko04152,ko04212,map01040,map01212,map03320,map04152,map04212 - R02222 RC00917 ko00000,ko00001,ko01000,ko01004 - - - DDE_Tnp_ISL3,FA_desaturase QTD1_k127_2109165_9 1510531.JQJJ01000009_gene866 6.685e-48 179.0 COG1522@1|root,COG1522@2|Bacteria,1RI7R@1224|Proteobacteria,2U9CC@28211|Alphaproteobacteria,3JVQX@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria K helix_turn_helix ASNC type dadR - - - - - - - - - - - AsnC_trans_reg,HTH_24,HTH_AsnC-type QTD1_k127_2109165_0 338969.Rfer_4054 8.945e-155 496.0 COG0686@1|root,COG0686@2|Bacteria,1QTX1@1224|Proteobacteria,2VHD1@28216|Betaproteobacteria,4ACCT@80864|Comamonadaceae 28216|Betaproteobacteria C Alanine dehydrogenase/PNT, C-terminal domain ald - 1.4.1.1 ko:K00259 ko00250,ko00430,ko01100,map00250,map00430,map01100 - R00396 RC00008 ko00000,ko00001,ko01000 - - - AlaDh_PNT_C,AlaDh_PNT_N QTD1_k127_2109165_6 267608.RSc2717 5.264e-70 243.0 COG2353@1|root,COG2353@2|Bacteria,1RCXN@1224|Proteobacteria,2VS71@28216|Betaproteobacteria,1K02H@119060|Burkholderiaceae 28216|Betaproteobacteria S Belongs to the UPF0312 family - - - - - - - - - - - - YceI QTD1_k127_2109165_7 1212548.B381_19004 1.352e-60 211.0 COG0579@1|root,COG0579@2|Bacteria,1N0QB@1224|Proteobacteria,1RN24@1236|Gammaproteobacteria,1Z1GV@136846|Pseudomonas stutzeri group 1236|Gammaproteobacteria S Oxidoreductase, FAD-binding family protein - - - - - - - - - - - - DAO QTD1_k127_2115460_0 1267533.KB906739_gene2494 1.769e-184 586.0 COG3533@1|root,COG3533@2|Bacteria,3Y6PC@57723|Acidobacteria,2JKG6@204432|Acidobacteriia 204432|Acidobacteriia S Beta-L-arabinofuranosidase, GH127 - - - ko:K09955 - - - - ko00000 - - - Glyco_hydro_127 QTD1_k127_2115460_1 1173022.Cri9333_3997 4.041e-112 396.0 COG1501@1|root,COG1501@2|Bacteria,1GBGY@1117|Cyanobacteria,1HE2H@1150|Oscillatoriales 1117|Cyanobacteria G Belongs to the glycosyl hydrolase 31 family - - - - - - - - - - - - DUF5110,Glyco_hydro_31 QTD1_k127_2115460_2 1267533.KB906736_gene1309 5.169e-27 117.0 COG3345@1|root,COG3345@2|Bacteria,3Y3UB@57723|Acidobacteria,2JKQN@204432|Acidobacteriia 204432|Acidobacteriia G PFAM Glycoside hydrolase, clan GH-D - - - - - - - - - - - - Melibiase QTD1_k127_2148_0 1385517.N800_07235 6.573e-242 754.0 COG0056@1|root,COG0056@2|Bacteria,1MUG7@1224|Proteobacteria,1RP4V@1236|Gammaproteobacteria,1X31U@135614|Xanthomonadales 135614|Xanthomonadales C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit atpA - 3.6.3.14 ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194,ko01000 3.A.2.1 - - ATP-synt_ab,ATP-synt_ab_C,ATP-synt_ab_N QTD1_k127_2148_2 187272.Mlg_2872 1.017e-40 160.0 COG0712@1|root,COG0712@2|Bacteria,1MVRH@1224|Proteobacteria,1S8X2@1236|Gammaproteobacteria,1WY1N@135613|Chromatiales 135613|Chromatiales C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation atpH - - ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - OSCP QTD1_k127_2148_3 84531.JMTZ01000014_gene2773 2.542e-40 154.0 COG0711@1|root,COG0711@2|Bacteria,1RHZ0@1224|Proteobacteria,1S402@1236|Gammaproteobacteria,1X60B@135614|Xanthomonadales 135614|Xanthomonadales C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) atpF - - ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - ATP-synt_B QTD1_k127_2148_5 765914.ThisiDRAFT_2277 5.024e-34 132.0 COG0636@1|root,32S3K@2|Bacteria,1N1NA@1224|Proteobacteria,1S9MD@1236|Gammaproteobacteria 1236|Gammaproteobacteria C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation atpE GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - ATP-synt_C QTD1_k127_2148_1 1122164.JHWF01000003_gene2075 2.76e-80 283.0 COG0356@1|root,COG0356@2|Bacteria,1MV87@1224|Proteobacteria,1RPHK@1236|Gammaproteobacteria,1JDRN@118969|Legionellales 118969|Legionellales C it plays a direct role in the translocation of protons across the membrane atpB GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194,ko03110 3.A.2.1 - - ATP-synt_A QTD1_k127_2148_6 1283300.ATXB01000002_gene3177 2.139e-05 53.0 COG3312@1|root,COG3312@2|Bacteria,1NDM1@1224|Proteobacteria,1THRJ@1236|Gammaproteobacteria,1XFG2@135618|Methylococcales 135618|Methylococcales C ATP synthase I chain - - - ko:K02116 - - - - ko00000,ko00194 3.A.2.1 - - ATP-synt_I QTD1_k127_2148_4 305900.GV64_01710 7.634e-39 149.0 COG1475@1|root,COG1475@2|Bacteria,1MW2E@1224|Proteobacteria,1RN65@1236|Gammaproteobacteria,1XHMA@135619|Oceanospirillales 135619|Oceanospirillales K Belongs to the ParB family parB - - ko:K03497 - - - - ko00000,ko03000,ko03036,ko04812 - - - ParBc QTD1_k127_2205911_13 75379.Tint_0455 7.415e-27 117.0 COG3245@1|root,COG3245@2|Bacteria,1MZBZ@1224|Proteobacteria,2VMBB@28216|Betaproteobacteria,1KPJG@119065|unclassified Burkholderiales 28216|Betaproteobacteria C Cytochrome C oxidase, cbb3-type, subunit III - - - - - - - - - - - - Cytochrome_CBB3 QTD1_k127_2205911_3 1121015.N789_08425 2.969e-145 477.0 COG0606@1|root,COG0606@2|Bacteria,1MU4R@1224|Proteobacteria,1RMB9@1236|Gammaproteobacteria,1X4KT@135614|Xanthomonadales 135614|Xanthomonadales O Among the AAA ATPases, the YifB protease family belongs to the Helix 2 insert clade - - - ko:K07391 - - - - ko00000 - - - ChlI,Mg_chelatase,Mg_chelatase_C QTD1_k127_2205911_15 1123377.AUIV01000015_gene217 3.877e-15 79.0 COG2960@1|root,COG2960@2|Bacteria,1N7AH@1224|Proteobacteria,1SCH1@1236|Gammaproteobacteria,1X86Q@135614|Xanthomonadales 135614|Xanthomonadales S protein conserved in bacteria - - - ko:K09806 - - - - ko00000 - - - BMFP QTD1_k127_2205911_0 1123073.KB899241_gene2530 5.307e-230 722.0 COG0004@1|root,COG0004@2|Bacteria,1NR9F@1224|Proteobacteria,1RNKF@1236|Gammaproteobacteria,1X39P@135614|Xanthomonadales 135614|Xanthomonadales P Ammonium transporter amtB - - ko:K03320 - - - - ko00000,ko02000 1.A.11 - - Ammonium_transp QTD1_k127_2205911_16 1236959.BAMT01000012_gene3096 2.847e-06 57.0 2BCK1@1|root,32662@2|Bacteria,1RHH4@1224|Proteobacteria,2VSPG@28216|Betaproteobacteria,2KN8W@206350|Nitrosomonadales 206350|Nitrosomonadales S Domain of unknown function (DUF4124) - - - - - - - - - - - - DUF4124 QTD1_k127_2205911_7 243233.MCA2048 3.186e-89 304.0 COG2084@1|root,COG2084@2|Bacteria,1MUGU@1224|Proteobacteria,1RQ2D@1236|Gammaproteobacteria,1XEAH@135618|Methylococcales 135618|Methylococcales I NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - - - - - - - - - - NAD_binding_11,NAD_binding_2 QTD1_k127_2205911_9 396588.Tgr7_0032 8.334e-75 276.0 COG2972@1|root,COG2972@2|Bacteria,1MXVQ@1224|Proteobacteria,1RQDA@1236|Gammaproteobacteria,1WYMY@135613|Chromatiales 135613|Chromatiales T Histidine kinase - - 2.7.13.3 ko:K08082 ko02020,map02020 M00493 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - His_kinase QTD1_k127_2205911_10 396588.Tgr7_0031 5.289e-72 250.0 COG3279@1|root,COG3279@2|Bacteria,1MUE8@1224|Proteobacteria,1RMJJ@1236|Gammaproteobacteria,1WY8N@135613|Chromatiales 135613|Chromatiales KT Response regulator of the LytR AlgR family - - - ko:K08083 ko02020,map02020 M00493 - - ko00000,ko00001,ko00002,ko02022 - - - LytTR,Response_reg QTD1_k127_2205911_1 414684.RC1_0278 1.389e-215 696.0 COG4773@1|root,COG4773@2|Bacteria,1QURT@1224|Proteobacteria,2TYIH@28211|Alphaproteobacteria 28211|Alphaproteobacteria P TonB dependent receptor - - - - - - - - - - - - Plug,TonB_dep_Rec QTD1_k127_2205911_2 396588.Tgr7_0057 1.463e-197 635.0 COG1220@1|root,COG1220@2|Bacteria,1MVK9@1224|Proteobacteria,1RMYV@1236|Gammaproteobacteria,1WWCI@135613|Chromatiales 135613|Chromatiales O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis hslU - - ko:K03667 - - - - ko00000,ko03110 - - - AAA_2,ClpB_D2-small QTD1_k127_2205911_8 314278.NB231_11069 5.35e-75 256.0 COG5405@1|root,COG5405@2|Bacteria,1MVF2@1224|Proteobacteria,1RP7P@1236|Gammaproteobacteria,1WVXJ@135613|Chromatiales 135613|Chromatiales O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery hslV - 3.4.25.2 ko:K01419 - - - - ko00000,ko01000,ko01002 - - - Proteasome QTD1_k127_2205911_4 713586.KB900536_gene2182 1.156e-103 346.0 COG4973@1|root,COG4973@2|Bacteria,1MUJJ@1224|Proteobacteria,1RMJG@1236|Gammaproteobacteria,1WW4W@135613|Chromatiales 135613|Chromatiales L Belongs to the 'phage' integrase family. XerC subfamily xerC - - ko:K03733 - - - - ko00000,ko03036 - - - Phage_int_SAM_1,Phage_integrase QTD1_k127_2205911_12 519989.ECTPHS_00894 3.399e-33 140.0 COG3159@1|root,COG3159@2|Bacteria,1R4BP@1224|Proteobacteria,1S9SC@1236|Gammaproteobacteria,1WY2X@135613|Chromatiales 135613|Chromatiales S Protein of unknown function, DUF484 - - - ko:K09921 - - - - ko00000 - - - DUF484 QTD1_k127_2205911_5 713587.THITH_00510 2.206e-93 315.0 COG0253@1|root,COG0253@2|Bacteria,1MWDH@1224|Proteobacteria,1RMGV@1236|Gammaproteobacteria,1WVYQ@135613|Chromatiales 135613|Chromatiales E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan dapF - 5.1.1.7 ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00527 R02735 RC00302 ko00000,ko00001,ko00002,ko01000 - - - DAP_epimerase QTD1_k127_2205911_11 580332.Slit_0149 1.123e-40 155.0 COG1832@1|root,COG1832@2|Bacteria,1N03D@1224|Proteobacteria,2VU9G@28216|Betaproteobacteria,44WH5@713636|Nitrosomonadales 28216|Betaproteobacteria S SMART CoA-binding domain protein - - - ko:K06929 - - - - ko00000 - - - CoA_binding_2 QTD1_k127_2205911_6 396588.Tgr7_0025 2.745e-89 308.0 COG0543@1|root,COG0633@1|root,COG0543@2|Bacteria,COG0633@2|Bacteria,1MV72@1224|Proteobacteria,1RPH5@1236|Gammaproteobacteria,1WXHI@135613|Chromatiales 135613|Chromatiales C Oxidoreductase FAD-binding domain - - 1.17.1.1 ko:K00523 ko00520,map00520 - R03391,R03392 RC00230 ko00000,ko00001,ko01000 - - - FAD_binding_6,Fer2,NAD_binding_1 QTD1_k127_2205911_14 555088.DealDRAFT_3112 2.265e-25 113.0 COG0332@1|root,COG0332@2|Bacteria,1TP0K@1239|Firmicutes,248V8@186801|Clostridia,42JKV@68298|Syntrophomonadaceae 186801|Clostridia I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids - - - - - - - - - - - - ACP_syn_III,ACP_syn_III_C QTD1_k127_2219656_5 1444770.AF72_10840 8.357e-58 202.0 COG1674@1|root,COG1674@2|Bacteria,1MVPI@1224|Proteobacteria,1RM9A@1236|Gammaproteobacteria,1X4F7@135614|Xanthomonadales 135614|Xanthomonadales D Cell division protein ftsk ftsK - - ko:K03466 - - - - ko00000,ko03036 3.A.12 - - Cupin_4,FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma QTD1_k127_2219656_1 396588.Tgr7_2004 1.649e-167 542.0 COG1674@1|root,COG1674@2|Bacteria,1MVPI@1224|Proteobacteria,1RM9A@1236|Gammaproteobacteria,1WWP6@135613|Chromatiales 135613|Chromatiales D DNA segregation ATPase FtsK SpoIIIE - - - ko:K03466 - - - - ko00000,ko03036 3.A.12 - - FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma QTD1_k127_2219656_2 1123253.AUBD01000001_gene1545 2.879e-136 471.0 COG0492@1|root,COG0492@2|Bacteria,1MV15@1224|Proteobacteria,1RMEX@1236|Gammaproteobacteria,1X3Y1@135614|Xanthomonadales 135614|Xanthomonadales O Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family trxB - 1.8.1.9 ko:K00384 ko00450,map00450 - R02016,R03596,R09372 RC00013,RC02518,RC02873 ko00000,ko00001,ko01000 - - - Pyr_redox_2 QTD1_k127_2219656_3 768671.ThimaDRAFT_2431 4.4e-115 385.0 COG3146@1|root,COG3146@2|Bacteria,1MU35@1224|Proteobacteria,1RNWI@1236|Gammaproteobacteria,1WXHA@135613|Chromatiales 135613|Chromatiales S Peptidogalycan biosysnthesis/recognition - - - ko:K09919 - - - - ko00000 - - - FemAB_like QTD1_k127_2219656_4 1348657.M622_02090 5.061e-76 266.0 COG2360@1|root,COG2360@2|Bacteria,1R9W8@1224|Proteobacteria,2VIUV@28216|Betaproteobacteria,2KV37@206389|Rhodocyclales 206389|Rhodocyclales O Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine aat - 2.3.2.6 ko:K00684 - - R03813,R11443,R11444 RC00055,RC00064 ko00000,ko01000 - - - Leu_Phe_trans QTD1_k127_2219656_7 1415778.JQMM01000001_gene1748 1.563e-30 134.0 COG0361@1|root,COG0361@2|Bacteria,1MZFU@1224|Proteobacteria,1S8WZ@1236|Gammaproteobacteria,1J6G9@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex infA GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - ko:K02518 - - - - ko00000,ko03012 - - - eIF-1a QTD1_k127_2219656_0 1288826.MSNKSG1_07383 0.0 1011.0 COG0542@1|root,COG0542@2|Bacteria,1MV8B@1224|Proteobacteria,1RMH3@1236|Gammaproteobacteria,464M6@72275|Alteromonadaceae 1236|Gammaproteobacteria O Belongs to the ClpA ClpB family clpA GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043335,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 - ko:K03694 - - - - ko00000,ko03110 - - - AAA,AAA_2,ClpB_D2-small,Clp_N QTD1_k127_2219656_6 870187.Thini_0294 3.9e-43 160.0 COG2127@1|root,COG2127@2|Bacteria,1MZU8@1224|Proteobacteria,1S8Z7@1236|Gammaproteobacteria,46127@72273|Thiotrichales 72273|Thiotrichales S Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation clpS - - ko:K06891 - - - - ko00000 - - - ClpS QTD1_k127_2232856_0 572477.Alvin_0325 3.996e-193 608.0 COG3808@1|root,COG3808@2|Bacteria,1MUQ3@1224|Proteobacteria,1RN4K@1236|Gammaproteobacteria,1WVYF@135613|Chromatiales 135613|Chromatiales C pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for hppA - 3.6.1.1 ko:K15987 ko00190,map00190 - - - ko00000,ko00001,ko01000 3.A.10.1 - - H_PPase QTD1_k127_2232856_4 1121106.JQKB01000025_gene4086 5.254e-62 217.0 COG0229@1|root,COG0229@2|Bacteria,1RGWC@1224|Proteobacteria,2U70T@28211|Alphaproteobacteria,2JTFN@204441|Rhodospirillales 204441|Rhodospirillales O SelR domain msrB - 1.8.4.12 ko:K07305 - - - - ko00000,ko01000 - - - SelR QTD1_k127_2232856_1 1123368.AUIS01000023_gene933 3.667e-167 552.0 COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,1RM8A@1236|Gammaproteobacteria,2NDJD@225057|Acidithiobacillales 225057|Acidithiobacillales T Diguanylate cyclase - - - - - - - - - - - - CZB,EAL,GGDEF,PAS,PAS_4 QTD1_k127_2232856_6 314278.NB231_13886 1.338e-52 193.0 COG2518@1|root,COG2518@2|Bacteria,1RD6S@1224|Proteobacteria,1S0KH@1236|Gammaproteobacteria,1WX4D@135613|Chromatiales 135613|Chromatiales O PFAM protein-L-isoaspartate(D-aspartate) O-methyltransferase - - 2.1.1.77 ko:K00573 - - - - ko00000,ko01000 - - - PCMT QTD1_k127_2232856_3 396588.Tgr7_0483 1.494e-85 301.0 COG1538@1|root,COG1538@2|Bacteria,1MWCJ@1224|Proteobacteria,1RQQV@1236|Gammaproteobacteria,1WVXZ@135613|Chromatiales 135613|Chromatiales MU type I secretion outer membrane protein, TolC - - - ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 1.B.17,2.A.6.2 - - OEP QTD1_k127_2232856_2 1123253.AUBD01000011_gene2067 2.287e-125 413.0 COG1519@1|root,COG1519@2|Bacteria,1MU9F@1224|Proteobacteria,1RNBR@1236|Gammaproteobacteria,1X4GI@135614|Xanthomonadales 135614|Xanthomonadales M transferase waaA - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 ko:K02527 ko00540,ko01100,map00540,map01100 M00060,M00080 R04658,R05074,R09763 RC00009,RC00077,RC00247 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT30 - Glycos_transf_1,Glycos_transf_N QTD1_k127_2232856_5 1163407.UU7_02762 1.018e-53 199.0 COG3642@1|root,COG3642@2|Bacteria,1QWT7@1224|Proteobacteria,1T2XM@1236|Gammaproteobacteria,1XCXI@135614|Xanthomonadales 135614|Xanthomonadales H Catalyzes the ATP-dependent phosphorylation of the 3- deoxy-D-manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position kdkA - 2.7.1.166 ko:K11211 ko00540,map00540 - R09767 RC00002,RC00078 ko00000,ko00001,ko01000 - - - Kdo QTD1_k127_2232856_7 187272.Mlg_2806 4.699e-09 59.0 COG0859@1|root,COG0859@2|Bacteria,1MYZA@1224|Proteobacteria,1RR6K@1236|Gammaproteobacteria 1236|Gammaproteobacteria M heptosyltransferase opsX - - ko:K12982 - - - - ko00000,ko01000,ko01003,ko01005 - GT9 - Glyco_transf_9 QTD1_k127_2235945_2 1121405.dsmv_2076 6.943e-61 216.0 COG3568@1|root,COG3568@2|Bacteria,1RBWV@1224|Proteobacteria,42QPA@68525|delta/epsilon subdivisions,2WMPU@28221|Deltaproteobacteria 28221|Deltaproteobacteria L PFAM Endonuclease Exonuclease phosphatase - - - - - - - - - - - - Exo_endo_phos QTD1_k127_2235945_0 1283300.ATXB01000002_gene3073 2.624e-214 687.0 COG1024@1|root,COG1250@1|root,COG1024@2|Bacteria,COG1250@2|Bacteria,1MU9P@1224|Proteobacteria,1RMZ8@1236|Gammaproteobacteria,1XEFK@135618|Methylococcales 135618|Methylococcales I Enoyl-CoA hydratase/isomerase - - - - - - - - - - - - 3HCDH,3HCDH_N,ECH_1 QTD1_k127_2235945_1 391615.ABSJ01000026_gene110 9.76e-65 231.0 COG0607@1|root,COG0664@1|root,COG0607@2|Bacteria,COG0664@2|Bacteria,1R9Q1@1224|Proteobacteria,1RSKD@1236|Gammaproteobacteria,1J6A4@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria PT COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - - - - - - - - - - Rhodanese,cNMP_binding QTD1_k127_2249592_1 1198232.CYCME_0641 2.799e-80 271.0 COG0109@1|root,COG0109@2|Bacteria,1MW3S@1224|Proteobacteria,1RNHC@1236|Gammaproteobacteria,460H9@72273|Thiotrichales 72273|Thiotrichales O Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group cyoE - 2.5.1.141 ko:K02257 ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714 M00154 R07411 RC01786 ko00000,ko00001,ko00002,ko01000,ko01006,ko03029 - - - UbiA QTD1_k127_2249592_3 472759.Nhal_2875 6.43e-21 99.0 2EAWX@1|root,334Y4@2|Bacteria,1P2TY@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - QTD1_k127_2249592_0 5722.XP_001289457.1 5.608e-114 379.0 COG0491@1|root,KOG0813@2759|Eukaryota 2759|Eukaryota T hydroxyacylglutathione hydrolase activity - - 3.1.2.6 ko:K01069 ko00620,map00620 - R01736 RC00004,RC00137 ko00000,ko00001,ko01000 - - - HAGH_C,Lactamase_B QTD1_k127_2249592_4 296591.Bpro_3702 2.786e-10 70.0 COG0457@1|root,COG0457@2|Bacteria,1N6TJ@1224|Proteobacteria,2VXHR@28216|Betaproteobacteria,4AIAK@80864|Comamonadaceae 28216|Betaproteobacteria S Tetratricopeptide repeat - - - - - - - - - - - - TPR_2 QTD1_k127_2249592_2 215803.DB30_8149 1.084e-73 259.0 COG1858@1|root,COG1858@2|Bacteria,1MV70@1224|Proteobacteria,4300W@68525|delta/epsilon subdivisions,2X35W@28221|Deltaproteobacteria,2YUEH@29|Myxococcales 28221|Deltaproteobacteria C cytochrome c peroxidase - - 1.11.1.5 ko:K00428 - - - - ko00000,ko01000 - - - CCP_MauG,Cytochrom_C QTD1_k127_2251398_1 472759.Nhal_0597 2.53e-84 302.0 COG0642@1|root,COG2205@2|Bacteria,1MXF8@1224|Proteobacteria,1RMMI@1236|Gammaproteobacteria,1X2Q0@135613|Chromatiales 135613|Chromatiales T Histidine kinase - - 2.7.13.3 ko:K02668 ko02020,map02020 M00501 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035 - - - HATPase_c,HisKA,PAS_8 QTD1_k127_2251398_0 1049564.TevJSym_aq00800 2.452e-138 448.0 COG0045@1|root,COG0045@2|Bacteria,1MVCE@1224|Proteobacteria,1RMSU@1236|Gammaproteobacteria,1J53T@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit sucC GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5 ko:K01903 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00173,M00374,M00620 R00405,R02404 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000 - - - ATP-grasp_2,Ligase_CoA QTD1_k127_2252516_5 59196.RICGR_1045 6.614e-53 190.0 COG2890@1|root,COG2890@2|Bacteria,1MX8Q@1224|Proteobacteria,1RPHQ@1236|Gammaproteobacteria,1JCVA@118969|Legionellales 118969|Legionellales J Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue prmB - 2.1.1.298 ko:K07320 - - R10806 RC00003,RC03279 ko00000,ko01000,ko03009 - - - MTS QTD1_k127_2252516_0 1122194.AUHU01000002_gene2558 5.157e-176 562.0 COG0082@1|root,COG0082@2|Bacteria,1MU98@1224|Proteobacteria,1RMQS@1236|Gammaproteobacteria,46517@72275|Alteromonadaceae 1236|Gammaproteobacteria E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system aroC GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R01714 RC00586 ko00000,ko00001,ko00002,ko01000 - - iE2348C_1286.E2348C_2469,iEC55989_1330.EC55989_2573,iECO103_1326.ECO103_2794,iECO111_1330.ECO111_3077,iECO26_1355.ECO26_3317,iECSE_1348.ECSE_2638,iECW_1372.ECW_m2518,iEKO11_1354.EKO11_1436,iSSON_1240.SSON_2387,iUMNK88_1353.UMNK88_2882,iWFL_1372.ECW_m2518 Chorismate_synt QTD1_k127_2252516_4 396588.Tgr7_1249 3.587e-61 241.0 COG3170@1|root,COG3170@2|Bacteria,1MXV7@1224|Proteobacteria,1RMM5@1236|Gammaproteobacteria,1WVVA@135613|Chromatiales 135613|Chromatiales NU FimV C-terminal - - - ko:K08086 - - - - ko00000 - - - TPR_19 QTD1_k127_2252516_3 1042377.AFPJ01000037_gene3000 3.038e-87 295.0 COG0101@1|root,COG0101@2|Bacteria,1MUYI@1224|Proteobacteria,1RMK2@1236|Gammaproteobacteria,464DE@72275|Alteromonadaceae 1236|Gammaproteobacteria J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs truA GO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 5.4.99.12 ko:K06173 - - - - ko00000,ko01000,ko03016 - - - PseudoU_synth_1 QTD1_k127_2252516_1 395493.BegalDRAFT_1848 6.092e-132 426.0 COG0777@1|root,COG0777@2|Bacteria,1MW8G@1224|Proteobacteria,1RNDS@1236|Gammaproteobacteria,4600U@72273|Thiotrichales 72273|Thiotrichales I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA accD - 2.1.3.15,6.4.1.2 ko:K01963 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04386 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 - - - Carboxyl_trans QTD1_k127_2252516_2 292415.Tbd_1911 4.24e-108 364.0 COG0285@1|root,COG0285@2|Bacteria,1MVCH@1224|Proteobacteria,2VI0H@28216|Betaproteobacteria,1KSGF@119069|Hydrogenophilales 119069|Hydrogenophilales H Mur ligase family, glutamate ligase domain - - 6.3.2.12,6.3.2.17 ko:K11754 ko00790,ko01100,map00790,map01100 M00126,M00841 R00942,R02237,R04241 RC00064,RC00090,RC00162 ko00000,ko00001,ko00002,ko01000 - - - Mur_ligase_C,Mur_ligase_M QTD1_k127_2252516_6 1384056.N787_05790 1.601e-07 63.0 COG3147@1|root,COG3147@2|Bacteria,1NGE3@1224|Proteobacteria,1SH3N@1236|Gammaproteobacteria,1X4NY@135614|Xanthomonadales 135614|Xanthomonadales S protein conserved in bacteria - - - - - - - - - - - - SPOR QTD1_k127_2287493_2 1217718.ALOU01000040_gene185 8.74e-129 437.0 COG1752@1|root,COG4775@1|root,COG1752@2|Bacteria,COG4775@2|Bacteria,1MUM9@1224|Proteobacteria,2VJRI@28216|Betaproteobacteria 28216|Betaproteobacteria M surface antigen variable number repeat protein - - - ko:K07001 - - - - ko00000 - - - Bac_surface_Ag,POTRA,Patatin QTD1_k127_2287493_0 1234364.AMSF01000015_gene3100 3.402e-195 631.0 COG4993@1|root,COG4993@2|Bacteria,1MUQX@1224|Proteobacteria,1RN5D@1236|Gammaproteobacteria,1X4FN@135614|Xanthomonadales 135614|Xanthomonadales G Glucose dehydrogenase - - - - - - - - - - - - PQQ,PQQ_2 QTD1_k127_2287493_4 1442599.JAAN01000024_gene2004 2.547e-50 196.0 COG4700@1|root,COG4700@2|Bacteria,1R577@1224|Proteobacteria,1S5I8@1236|Gammaproteobacteria,1X5VW@135614|Xanthomonadales 135614|Xanthomonadales S Tetratricopeptide repeat - - - - - - - - - - - - TPR_19 QTD1_k127_2287493_1 402881.Plav_1144 3.558e-147 490.0 COG2957@1|root,COG2957@2|Bacteria,1MX65@1224|Proteobacteria,2U0RR@28211|Alphaproteobacteria,1JQ16@119043|Rhodobiaceae 28211|Alphaproteobacteria E Porphyromonas-type peptidyl-arginine deiminase aguA - 3.5.3.12 ko:K10536 ko00330,ko01100,map00330,map01100 - R01416 RC00177 ko00000,ko00001,ko01000 - - - PAD_porph QTD1_k127_2287493_3 1163409.UUA_03433 1.888e-110 366.0 COG0531@1|root,COG0531@2|Bacteria,1MXNJ@1224|Proteobacteria,1RMKV@1236|Gammaproteobacteria,1X49X@135614|Xanthomonadales 135614|Xanthomonadales E amino acid - - - ko:K03294 - - - - ko00000 2.A.3.2 - - AA_permease_2 QTD1_k127_230377_5 1384054.N790_11315 7.092e-51 183.0 COG0148@1|root,COG0148@2|Bacteria,1MU1N@1224|Proteobacteria,1RNQA@1236|Gammaproteobacteria,1X2YM@135614|Xanthomonadales 135614|Xanthomonadales G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis eno - 4.2.1.11 ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 M00001,M00002,M00003,M00346,M00394 R00658 RC00349 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 - - - Enolase_C,Enolase_N QTD1_k127_230377_8 1056820.KB900699_gene1224 4.704e-21 99.0 COG2919@1|root,COG2919@2|Bacteria,1N7AA@1224|Proteobacteria,1SD8H@1236|Gammaproteobacteria,2PNW7@256005|Alteromonadales genera incertae sedis 1236|Gammaproteobacteria D Septum formation initiator ftsB GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0019954,GO:0022402,GO:0022414,GO:0030428,GO:0032153,GO:0032505,GO:0042802,GO:0043093,GO:0044464,GO:0051301 - ko:K05589 - - - - ko00000,ko03036 - - - DivIC QTD1_k127_230377_4 323261.Noc_0854 1.123e-54 200.0 COG1211@1|root,COG1211@2|Bacteria,1MY3B@1224|Proteobacteria,1S21S@1236|Gammaproteobacteria,1WXHT@135613|Chromatiales 135613|Chromatiales I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) ispD - 2.7.7.60 ko:K00991 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05633 RC00002 ko00000,ko00001,ko00002,ko01000 - - - IspD QTD1_k127_230377_3 316273.XCV1755 1.807e-58 214.0 COG0245@1|root,COG0245@2|Bacteria,1MVHA@1224|Proteobacteria,1S3RQ@1236|Gammaproteobacteria,1X5Z0@135614|Xanthomonadales 135614|Xanthomonadales I Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) ispF - 4.6.1.12 ko:K01770 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05637 RC00002,RC01440 ko00000,ko00001,ko00002,ko01000 - - - YgbB QTD1_k127_230377_2 765910.MARPU_02660 4.079e-85 301.0 COG0585@1|root,COG0585@2|Bacteria,1MXHD@1224|Proteobacteria,1RPRF@1236|Gammaproteobacteria,1WWFE@135613|Chromatiales 135613|Chromatiales J Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs truD - 5.4.99.27 ko:K06176 - - - - ko00000,ko01000,ko03016 - - - TruD QTD1_k127_230377_7 1267533.KB906738_gene2351 3.762e-28 132.0 COG0457@1|root,COG3710@1|root,COG5616@1|root,COG0457@2|Bacteria,COG3710@2|Bacteria,COG5616@2|Bacteria,3Y7E7@57723|Acidobacteria,2JKGS@204432|Acidobacteriia 204432|Acidobacteriia K Transcriptional regulatory protein, C terminal - - - - - - - - - - - - Trans_reg_C QTD1_k127_230377_0 234267.Acid_3680 1.347e-121 416.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,3Y3FE@57723|Acidobacteria 2|Bacteria KU WD40 domain protein beta Propeller - - 2.7.11.1 ko:K08884,ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PD40,Pkinase,WD40 QTD1_k127_230377_6 1304275.C41B8_11950 2.145e-42 163.0 COG2840@1|root,COG2840@2|Bacteria,1RH34@1224|Proteobacteria,1S6B5@1236|Gammaproteobacteria 1236|Gammaproteobacteria S protein conserved in bacteria IV02_05925 - - - - - - - - - - - Smr QTD1_k127_230377_1 1049564.TevJSym_au00580 6.212e-99 331.0 COG0496@1|root,COG0496@2|Bacteria,1MVHE@1224|Proteobacteria,1RN36@1236|Gammaproteobacteria,1J5TA@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria S Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates surE GO:0003674,GO:0003824,GO:0004309,GO:0005488,GO:0005515,GO:0006139,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008254,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009129,GO:0009131,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009173,GO:0009175,GO:0009218,GO:0009222,GO:0009259,GO:0009261,GO:0009987,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0030145,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042578,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046049,GO:0046050,GO:0046131,GO:0046133,GO:0046135,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.1.3.5 ko:K03787 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 - R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346 RC00017 ko00000,ko00001,ko01000 - - iSFxv_1172.SFxv_3035 SurE QTD1_k127_230377_9 498211.CJA_2220 2.563e-07 53.0 COG2518@1|root,COG2518@2|Bacteria,1MXQC@1224|Proteobacteria,1RMHZ@1236|Gammaproteobacteria,1FGSD@10|Cellvibrio 1236|Gammaproteobacteria J Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins pcm GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0030091,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 ko:K00573 - - - - ko00000,ko01000 - - - PCMT QTD1_k127_2309078_9 1437448.AZRT01000105_gene457 1.795e-26 109.0 COG0422@1|root,COG0422@2|Bacteria,1MUVV@1224|Proteobacteria,2TS0S@28211|Alphaproteobacteria 28211|Alphaproteobacteria H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction thiC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 ko:K03147 ko00730,ko01100,map00730,map01100 M00127 R03472 RC03251,RC03252 ko00000,ko00001,ko00002,ko01000 - - - ThiC-associated,ThiC_Rad_SAM QTD1_k127_2309078_4 420324.KI912052_gene6108 6.846e-112 374.0 COG0665@1|root,COG0665@2|Bacteria,1N1TN@1224|Proteobacteria,2TR7B@28211|Alphaproteobacteria 28211|Alphaproteobacteria E COG0665 Glycine D-amino acid oxidases (deaminating) thiO - 1.4.3.19 ko:K03153 ko00730,ko01100,map00730,map01100 - R07463 RC01788 ko00000,ko00001,ko01000 - - - DAO QTD1_k127_2309078_10 1205680.CAKO01000040_gene1034 2.933e-17 82.0 COG2104@1|root,COG2104@2|Bacteria,1NG8E@1224|Proteobacteria,2UJK6@28211|Alphaproteobacteria,2JXX2@204441|Rhodospirillales 204441|Rhodospirillales H ThiS family thiS - - ko:K03154 ko04122,map04122 - - - ko00000,ko00001 - - - ThiS QTD1_k127_2309078_3 864069.MicloDRAFT_00004520 2.736e-122 396.0 COG2022@1|root,COG2022@2|Bacteria,1N0N5@1224|Proteobacteria,2TSXS@28211|Alphaproteobacteria,1JSHW@119045|Methylobacteriaceae 28211|Alphaproteobacteria H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S thiG - 2.8.1.10 ko:K03149 ko00730,ko01100,map00730,map01100 - R10247 RC03096,RC03097,RC03461 ko00000,ko00001,ko01000 - - - ThiG,ThiS QTD1_k127_2309078_6 1509405.GV67_06955 6.981e-81 278.0 COG0352@1|root,COG0352@2|Bacteria,1RDSU@1224|Proteobacteria,2TSXT@28211|Alphaproteobacteria,4BB7J@82115|Rhizobiaceae 28211|Alphaproteobacteria H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) thiE - 2.5.1.3 ko:K00788 ko00730,ko01100,map00730,map01100 M00127 R03223,R10712 RC00224,RC03255,RC03397 ko00000,ko00001,ko00002,ko01000 - - - TMP-TENI QTD1_k127_2309078_5 1205680.CAKO01000040_gene1037 6.872e-112 370.0 COG0476@1|root,COG0476@2|Bacteria,1MW7H@1224|Proteobacteria,2TRWY@28211|Alphaproteobacteria,2JVQP@204441|Rhodospirillales 204441|Rhodospirillales H ThiF family - - - - - - - - - - - - ThiF QTD1_k127_2309078_8 1123237.Salmuc_03483 2.489e-44 179.0 COG0351@1|root,COG0351@2|Bacteria,1MU9J@1224|Proteobacteria,2TUKR@28211|Alphaproteobacteria 28211|Alphaproteobacteria H Phosphomethylpyrimidine kinase thiD - 2.7.1.49,2.7.4.7 ko:K00941 ko00730,ko01100,map00730,map01100 M00127 R03471,R04509 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - Phos_pyr_kin QTD1_k127_2309078_7 1121920.AUAU01000005_gene1069 6.096e-63 240.0 2DCQR@1|root,2ZEZD@2|Bacteria,3Y8W1@57723|Acidobacteria 57723|Acidobacteria - - - - - - - - - - - - - - DUF4382 QTD1_k127_2309078_0 351160.RCIX2731 2.182e-173 558.0 COG0557@1|root,arCOG04686@2157|Archaea,2XT2E@28890|Euryarchaeota,2NA9N@224756|Methanomicrobia 224756|Methanomicrobia K PFAM ribonuclease II - - 3.1.13.1 ko:K01147 - - - - ko00000,ko01000,ko03016 - - - RNB QTD1_k127_2309078_2 1123073.KB899242_gene1680 2.166e-149 486.0 COG3659@1|root,COG3659@2|Bacteria,1Q8C7@1224|Proteobacteria,1SX9X@1236|Gammaproteobacteria,1X5ZZ@135614|Xanthomonadales 135614|Xanthomonadales M Carbohydrate-selective porin, OprB family - - - - - - - - - - - - OprB QTD1_k127_2309078_1 1122604.JONR01000001_gene1797 9.127e-154 494.0 COG1538@1|root,COG1538@2|Bacteria,1MUA8@1224|Proteobacteria,1RQ6B@1236|Gammaproteobacteria,1X5R7@135614|Xanthomonadales 135614|Xanthomonadales MU Outer membrane efflux protein - - - - - - - - - - - - OEP QTD1_k127_2318313_6 309801.trd_A0007 1.712e-47 179.0 COG0259@1|root,COG0259@2|Bacteria,2G8DA@200795|Chloroflexi,27Y9H@189775|Thermomicrobia 189775|Thermomicrobia H Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) - - 1.4.3.5 ko:K00275 ko00750,ko01100,ko01120,map00750,map01100,map01120 M00124 R00277,R00278,R01710,R01711 RC00048,RC00116 ko00000,ko00001,ko00002,ko01000 - - - PNP_phzG_C,Putative_PNPOx QTD1_k127_2318313_5 640081.Dsui_2000 4.866e-58 214.0 28RZD@1|root,2ZEBA@2|Bacteria,1RBEH@1224|Proteobacteria,2VQVV@28216|Betaproteobacteria,2KVMI@206389|Rhodocyclales 206389|Rhodocyclales - - - - - - - - - - - - - - - QTD1_k127_2318313_4 640081.Dsui_0531 3.549e-64 236.0 COG1120@1|root,COG1120@2|Bacteria,1MUNG@1224|Proteobacteria,2VRFJ@28216|Betaproteobacteria,2KW3Z@206389|Rhodocyclales 206389|Rhodocyclales HP COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components - - 3.6.3.34 ko:K02013 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.14 - - ABC_tran QTD1_k127_2318313_1 1123261.AXDW01000002_gene1524 3.591e-82 280.0 COG0483@1|root,COG0483@2|Bacteria,1PPJ0@1224|Proteobacteria,1RMVD@1236|Gammaproteobacteria,1X39H@135614|Xanthomonadales 135614|Xanthomonadales G Inositol monophosphatase family - - 3.1.3.15 ko:K05602 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R03013 RC00017 ko00000,ko00001,ko00002,ko01000 - - - Inositol_P QTD1_k127_2318313_2 1234364.AMSF01000001_gene2362 7.784e-78 265.0 COG2096@1|root,COG2096@2|Bacteria,1RDUF@1224|Proteobacteria,1S40D@1236|Gammaproteobacteria,1X50D@135614|Xanthomonadales 135614|Xanthomonadales S adenosyltransferase - - 2.5.1.17 ko:K00798 ko00860,ko01100,map00860,map01100 M00122 R01492,R05220,R07268 RC00533 ko00000,ko00001,ko00002,ko01000 - - - Cob_adeno_trans QTD1_k127_2318313_3 701347.Entcl_3618 3.004e-75 261.0 COG3023@1|root,COG3023@2|Bacteria,1RDHU@1224|Proteobacteria,1S3PG@1236|Gammaproteobacteria,3X267@547|Enterobacter 1236|Gammaproteobacteria V PFAM N-acetylmuramoyl-L-alanine amidase family 2 ampD GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043170,GO:0044424,GO:0044464,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 ko:K01447,ko:K03806 - - R04112 RC00064,RC00141 ko00000,ko01000,ko01011 - - iAF1260.b0110,iB21_1397.B21_00108,iBWG_1329.BWG_0103,iEC55989_1330.EC55989_0103,iECBD_1354.ECBD_3509,iECB_1328.ECB_00109,iECDH10B_1368.ECDH10B_0090,iECDH1ME8569_1439.ECDH1ME8569_0104,iECD_1391.ECD_00109,iECIAI1_1343.ECIAI1_0107,iECO103_1326.ECO103_0110,iECO111_1330.ECO111_0111,iECO26_1355.ECO26_0112,iECSE_1348.ECSE_0110,iECW_1372.ECW_m0107,iEKO11_1354.EKO11_3806,iETEC_1333.ETEC_0106,iEcDH1_1363.EcDH1_3492,iEcE24377_1341.EcE24377A_0112,iEcHS_1320.EcHS_A0114,iEcolC_1368.EcolC_3549,iJO1366.b0110,iSFV_1184.SFV_0101,iSF_1195.SF0107,iSFxv_1172.SFxv_0113,iS_1188.S0109,iUMNK88_1353.UMNK88_108,iWFL_1372.ECW_m0107,iY75_1357.Y75_RS00560 Amidase_2 QTD1_k127_2318313_0 472759.Nhal_3353 6.196e-193 609.0 COG0161@1|root,COG0161@2|Bacteria,1MU2N@1224|Proteobacteria,1RP0W@1236|Gammaproteobacteria,1WWIR@135613|Chromatiales 135613|Chromatiales H Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor bioA - 2.6.1.62 ko:K00833 ko00780,ko01100,map00780,map01100 M00123,M00573,M00577 R03231 RC00006,RC00887 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_3 QTD1_k127_2319317_1 870187.Thini_2547 1.874e-68 252.0 COG4188@1|root,COG4188@2|Bacteria,1QUVG@1224|Proteobacteria,1T22C@1236|Gammaproteobacteria 1236|Gammaproteobacteria S COG1073 Hydrolases of the alpha beta superfamily - - - - - - - - - - - - Lipase_bact_N,PAF-AH_p_II QTD1_k127_2319317_4 105559.Nwat_1730 4.804e-57 207.0 COG0742@1|root,COG0742@2|Bacteria,1MXKW@1224|Proteobacteria,1RN21@1236|Gammaproteobacteria,1WY3H@135613|Chromatiales 135613|Chromatiales L Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle - - 2.1.1.171 ko:K08316 - - R07234 RC00003 ko00000,ko01000,ko03009 - - - Cons_hypoth95 QTD1_k127_2319317_2 1265490.JHVY01000018_gene257 2.312e-60 212.0 COG0669@1|root,COG0669@2|Bacteria,1RD9F@1224|Proteobacteria,1S41J@1236|Gammaproteobacteria 1236|Gammaproteobacteria H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate coaD GO:0003674,GO:0003824,GO:0004595,GO:0005488,GO:0005515,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 ko:K00954 ko00770,ko01100,map00770,map01100 M00120 R03035 RC00002 ko00000,ko00001,ko00002,ko01000 - - iPC815.YPO0053,iSDY_1059.SDY_4064 CTP_transf_like QTD1_k127_2319317_3 330214.NIDE0051 1.048e-59 219.0 COG0122@1|root,COG0122@2|Bacteria 2|Bacteria L 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase alkA - 2.1.1.63,3.2.2.21 ko:K00567,ko:K01247 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - HhH-GPD QTD1_k127_2319317_0 396588.Tgr7_0319 2.101e-97 325.0 COG0266@1|root,COG0266@2|Bacteria,1MVM5@1224|Proteobacteria,1RP3J@1236|Gammaproteobacteria,1WX0V@135613|Chromatiales 135613|Chromatiales L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates fpg - 3.2.2.23,4.2.99.18 ko:K10563 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Fapy_DNA_glyco,H2TH,zf-FPG_IleRS QTD1_k127_2319317_6 393595.ABO_0216 1.099e-19 89.0 COG0267@1|root,COG0267@2|Bacteria,1N6QV@1224|Proteobacteria,1SCEJ@1236|Gammaproteobacteria,1XMCR@135619|Oceanospirillales 135619|Oceanospirillales J there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc rpmG - - ko:K02913 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L33 QTD1_k127_2319317_5 1123261.AXDW01000016_gene3045 1.591e-30 122.0 COG0227@1|root,COG0227@2|Bacteria,1MZ57@1224|Proteobacteria,1S8UG@1236|Gammaproteobacteria,1X7I6@135614|Xanthomonadales 135614|Xanthomonadales J Belongs to the bacterial ribosomal protein bL28 family rpmB GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02902 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L28 QTD1_k127_2323995_2 543728.Vapar_3980 1.404e-18 101.0 COG4774@1|root,COG4774@2|Bacteria,1MV0X@1224|Proteobacteria,2VIQR@28216|Betaproteobacteria,4AD71@80864|Comamonadaceae 28216|Betaproteobacteria P receptor - - - ko:K16090 - - - - ko00000,ko02000 1.B.14.1.11 - - Plug,TonB_dep_Rec QTD1_k127_2323995_1 204669.Acid345_2457 8.565e-41 158.0 2DP2V@1|root,330AH@2|Bacteria,3Y5MP@57723|Acidobacteria,2JJZ7@204432|Acidobacteriia 204432|Acidobacteriia S Protein of unknown function (DUF3455) - - - - - - - - - - - - DUF3455 QTD1_k127_2323995_0 105559.Nwat_2894 3.853e-53 190.0 COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,1RM8A@1236|Gammaproteobacteria,1WVZ7@135613|Chromatiales 135613|Chromatiales T Diguanylate cyclase - - - - - - - - - - - - EAL,GGDEF,HAMP,PAS,PAS_3,PAS_4,Response_reg QTD1_k127_2338742_0 1449049.JONW01000012_gene215 1.968e-121 401.0 COG1228@1|root,COG1228@2|Bacteria,1MVAF@1224|Proteobacteria,2U4WG@28211|Alphaproteobacteria,2KIAY@204458|Caulobacterales 204458|Caulobacterales Q Amidohydrolase family - - - - - - - - - - - - Amidohydro_1 QTD1_k127_2338742_1 1049564.TevJSym_au00070 5.512e-30 128.0 COG0810@1|root,COG0810@2|Bacteria,1R65W@1224|Proteobacteria,1S133@1236|Gammaproteobacteria,1JAAK@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - - - - - - - - - - TonB_C QTD1_k127_2343411_2 1380394.JADL01000011_gene3947 1.765e-133 435.0 COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TRJV@28211|Alphaproteobacteria,2JP8V@204441|Rhodospirillales 204441|Rhodospirillales C Aldehyde dehydrogenase family - - - - - - - - - - - - Aldedh QTD1_k127_2343411_0 1101190.ARWB01000001_gene2870 5.671e-217 680.0 COG0174@1|root,COG0174@2|Bacteria,1MUGQ@1224|Proteobacteria,2TU6U@28211|Alphaproteobacteria,36ZZV@31993|Methylocystaceae 28211|Alphaproteobacteria E Glutamine synthetase, catalytic domain - - 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 - R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 - - - Gln-synt_C QTD1_k127_2343411_1 1122612.AUBA01000005_gene2805 5.056e-170 559.0 COG4948@1|root,COG4948@2|Bacteria,1R63G@1224|Proteobacteria,2TT3A@28211|Alphaproteobacteria 28211|Alphaproteobacteria M Belongs to the mandelate racemase muconate lactonizing enzyme family - - - - - - - - - - - - MR_MLE_C,MR_MLE_N QTD1_k127_2343411_3 575540.Isop_2008 1.434e-84 298.0 COG2271@1|root,COG2271@2|Bacteria,2IYU6@203682|Planctomycetes 203682|Planctomycetes G Major Facilitator Superfamily - - - ko:K02445 - - - - ko00000,ko02000 2.A.1.4.3 - - MFS_1 QTD1_k127_2343411_4 296591.Bpro_3216 7.64e-42 156.0 COG0075@1|root,COG0075@2|Bacteria,1MWHJ@1224|Proteobacteria,2VKXZ@28216|Betaproteobacteria,4A9K4@80864|Comamonadaceae 28216|Betaproteobacteria H Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily phnW - 2.6.1.37 ko:K03430 ko00440,ko01100,ko01120,map00440,map01100,map01120 - R04152 RC00008,RC00062 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_5 QTD1_k127_235228_12 1247024.JRLH01000001_gene723 6.681e-05 45.0 2DSWF@1|root,33HPF@2|Bacteria,1NMM8@1224|Proteobacteria,1SIHM@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_235228_2 1121272.KB903249_gene1924 8.283e-112 369.0 COG2801@1|root,COG2801@2|Bacteria,2GJ3V@201174|Actinobacteria,4DATE@85008|Micromonosporales 201174|Actinobacteria L Transposase and inactivated derivatives tnp - 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - GH3 - HTH_23,LZ_Tnp_IS481,rve,rve_3 QTD1_k127_235228_8 216142.LT40_15945 2.183e-34 143.0 COG1651@1|root,COG1651@2|Bacteria,1RGWH@1224|Proteobacteria,1S5WA@1236|Gammaproteobacteria 1236|Gammaproteobacteria O Thiol disulfide interchange protein dsbA GO:0005575,GO:0005623,GO:0042597,GO:0044464 - ko:K03673 ko01503,map01503 M00728 - - ko00000,ko00001,ko00002,ko03110 - - - DSBA,Thioredoxin_4 QTD1_k127_235228_4 2340.JV46_06000 2.923e-51 191.0 COG2863@1|root,COG2863@2|Bacteria,1N2NB@1224|Proteobacteria,1RZFP@1236|Gammaproteobacteria,1J6DD@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria C COG2863 Cytochrome c553 cc4 - - - - - - - - - - - Cytochrom_C QTD1_k127_235228_5 83406.HDN1F_19210 1.209e-48 185.0 COG0218@1|root,COG0218@2|Bacteria,1MY3Z@1224|Proteobacteria,1RNJP@1236|Gammaproteobacteria,1JA7U@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria D Necessary for normal cell division and for the maintenance of normal septation engB GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - ko:K03978 - - - - ko00000,ko03036 - - - MMR_HSR1 QTD1_k127_235228_11 1121921.KB898707_gene1257 3.217e-11 71.0 COG3637@1|root,COG3637@2|Bacteria,1RHVI@1224|Proteobacteria,1S6UY@1236|Gammaproteobacteria,2PP0E@256005|Alteromonadales genera incertae sedis 1236|Gammaproteobacteria M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl,OmpA_membrane QTD1_k127_235228_10 1121921.KB898707_gene1257 2.197e-11 74.0 COG3637@1|root,COG3637@2|Bacteria,1RHVI@1224|Proteobacteria,1S6UY@1236|Gammaproteobacteria,2PP0E@256005|Alteromonadales genera incertae sedis 1236|Gammaproteobacteria M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl,OmpA_membrane QTD1_k127_235228_0 243233.MCA2573 0.0 1140.0 COG0258@1|root,COG0749@1|root,COG0258@2|Bacteria,COG0749@2|Bacteria,1MU31@1224|Proteobacteria,1RNBG@1236|Gammaproteobacteria,1XEFJ@135618|Methylococcales 135618|Methylococcales L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity polA - 2.7.7.7 ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 - R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko01000,ko03032,ko03400 - - - 5_3_exonuc,5_3_exonuc_N,DNA_pol_A,DNA_pol_A_exo1 QTD1_k127_235228_1 1458357.BG58_38120 4.215e-127 421.0 COG5267@1|root,COG5267@2|Bacteria,1MWJK@1224|Proteobacteria,2VJ7P@28216|Betaproteobacteria,1JZP6@119060|Burkholderiaceae 28216|Betaproteobacteria S Protein of unknown function (DUF1800) - - - - - - - - - - - - DUF1800 QTD1_k127_235228_3 114615.BRADO5981 2.848e-110 370.0 COG4102@1|root,COG4102@2|Bacteria,1MX4R@1224|Proteobacteria,2TSFB@28211|Alphaproteobacteria,3JRCB@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria S Protein of unknown function (DUF1501) MA20_05265 - - - - - - - - - - - DUF1501 QTD1_k127_235228_7 469610.HMPREF0189_00059 3.05e-35 138.0 COG3671@1|root,COG3671@2|Bacteria,1N51H@1224|Proteobacteria,2VUKZ@28216|Betaproteobacteria,1KMEZ@119065|unclassified Burkholderiales 28216|Betaproteobacteria S membrane - - - - - - - - - - - - - QTD1_k127_235228_6 1123073.KB899241_gene2539 1.766e-48 177.0 COG2050@1|root,COG2050@2|Bacteria,1RGVP@1224|Proteobacteria,1S5WY@1236|Gammaproteobacteria,1X6XX@135614|Xanthomonadales 135614|Xanthomonadales Q protein possibly involved in aromatic compounds catabolism - - - - - - - - - - - - 4HBT QTD1_k127_235228_9 883126.HMPREF9710_03645 1.97e-30 123.0 COG0179@1|root,COG0179@2|Bacteria,1MVFA@1224|Proteobacteria,2VHG8@28216|Betaproteobacteria,472KK@75682|Oxalobacteraceae 28216|Betaproteobacteria Q 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase - - 3.7.1.20 ko:K16165 ko00350,ko01100,ko01120,map00350,map01100,map01120 - R01085 RC00326,RC00446 ko00000,ko00001,ko01000 - - - FAA_hydrolase QTD1_k127_2356014_5 396588.Tgr7_0061 1.958e-68 239.0 COG0661@1|root,COG0661@2|Bacteria,1MU1Z@1224|Proteobacteria,1RNQM@1236|Gammaproteobacteria,1WWEC@135613|Chromatiales 135613|Chromatiales S Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis ubiB - - ko:K03688 - - - - ko00000 - - - ABC1 QTD1_k127_2356014_0 1429851.X548_04485 9.946e-155 500.0 COG0534@1|root,COG0534@2|Bacteria,1MVRV@1224|Proteobacteria,1RRDQ@1236|Gammaproteobacteria,1X3ZH@135614|Xanthomonadales 135614|Xanthomonadales V Na -driven multidrug efflux pump - - - - - - - - - - - - MatE QTD1_k127_2356014_1 1111728.ATYS01000052_gene3669 3.39e-149 478.0 COG0667@1|root,COG0667@2|Bacteria,1MVEH@1224|Proteobacteria,1RPX5@1236|Gammaproteobacteria 1236|Gammaproteobacteria C Aldo keto reductase yccK - - - - - - - - - - - Aldo_ket_red QTD1_k127_2356014_7 1121935.AQXX01000131_gene2792 9.806e-59 217.0 COG0824@1|root,COG0824@2|Bacteria,1R6A6@1224|Proteobacteria 1224|Proteobacteria S Thioesterase - - - - - - - - - - - - - QTD1_k127_2356014_8 869210.Marky_1203 2.599e-54 202.0 COG0159@1|root,COG0159@2|Bacteria,1WJB8@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate trpA - 4.2.1.20 ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722 RC00209,RC00210,RC00700,RC00701,RC02868 ko00000,ko00001,ko00002,ko01000 - - - Trp_syntA QTD1_k127_2356014_2 429009.Adeg_1157 1.509e-147 477.0 COG0133@1|root,COG0133@2|Bacteria,1TPI3@1239|Firmicutes,24881@186801|Clostridia,42EWK@68295|Thermoanaerobacterales 186801|Clostridia E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine trpB - 4.2.1.20 ko:K01696 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722 RC00209,RC00210,RC00700,RC00701,RC02868 ko00000,ko00001,ko00002,ko01000 - - - PALP QTD1_k127_2356014_10 1122962.AULH01000004_gene2319 1.329e-28 126.0 COG0135@1|root,COG0135@2|Bacteria,1RA87@1224|Proteobacteria,2U7CH@28211|Alphaproteobacteria,36Y7P@31993|Methylocystaceae 28211|Alphaproteobacteria E N-(5'phosphoribosyl)anthranilate (PRA) isomerase trpF - 5.3.1.24 ko:K01817 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R03509 RC00945 ko00000,ko00001,ko00002,ko01000 - - - PRAI QTD1_k127_2356014_9 404589.Anae109_0373 1.172e-36 157.0 COG0134@1|root,COG0134@2|Bacteria,1MW5K@1224|Proteobacteria,42MAG@68525|delta/epsilon subdivisions,2WM94@28221|Deltaproteobacteria,2YV8U@29|Myxococcales 28221|Deltaproteobacteria E Belongs to the TrpC family trpC - 4.1.1.48,5.3.1.24 ko:K01609,ko:K13498 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R03508,R03509 RC00944,RC00945 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_2494 IGPS QTD1_k127_2356014_6 429009.Adeg_1160 1.711e-65 237.0 COG0547@1|root,COG0547@2|Bacteria,1TP8U@1239|Firmicutes,247WY@186801|Clostridia,42EK5@68295|Thermoanaerobacterales 186801|Clostridia F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) trpD - 2.4.2.18,4.1.3.27 ko:K00766,ko:K13497 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R00985,R00986,R01073 RC00010,RC00440,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 - - - Glycos_trans_3N,Glycos_transf_3 QTD1_k127_2356014_4 429009.Adeg_1161 9.434e-73 252.0 COG0512@1|root,COG0512@2|Bacteria,1TT9R@1239|Firmicutes,24FR0@186801|Clostridia,42G1H@68295|Thermoanaerobacterales 186801|Clostridia EH TIGRFAM glutamine amidotransferase of anthranilate synthase trpG - 2.6.1.85,4.1.3.27 ko:K01658,ko:K01664 ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025 M00023 R00985,R00986,R01716 RC00010,RC01418,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 - - - GATase QTD1_k127_2356014_3 1232410.KI421415_gene3080 3.326e-112 378.0 COG0147@1|root,COG0147@2|Bacteria,1MVBJ@1224|Proteobacteria,42MXN@68525|delta/epsilon subdivisions,2WJN0@28221|Deltaproteobacteria,43T7B@69541|Desulfuromonadales 28221|Deltaproteobacteria EH Anthranilate synthase component I, N terminal region trpE - 4.1.3.27 ko:K01657,ko:K13503 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 M00023 R00985,R00986 RC00010,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 - - - Anth_synt_I_N,Chorismate_bind QTD1_k127_2356014_11 1121929.KB898677_gene1789 8.406e-26 108.0 COG0605@1|root,COG0605@2|Bacteria,1TPXT@1239|Firmicutes,4HA6U@91061|Bacilli,470X4@74385|Gracilibacillus 91061|Bacilli P Iron/manganese superoxide dismutases, C-terminal domain sodA GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004784,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0044237,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748 1.15.1.1 ko:K04564 ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016 - - - ko00000,ko00001,ko01000 - - - Sod_Fe_C,Sod_Fe_N QTD1_k127_2407634_5 1396858.Q666_08800 4.482e-139 448.0 COG0472@1|root,COG0472@2|Bacteria,1MUTK@1224|Proteobacteria,1RNIG@1236|Gammaproteobacteria,465NF@72275|Alteromonadaceae 1236|Gammaproteobacteria M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan mraY GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 - R05629,R05630 RC00002,RC02753 ko00000,ko00001,ko01000,ko01011 9.B.146 - iEC042_1314.EC042_0088,iECABU_c1320.ECABU_c00920,iECED1_1282.ECED1_0088,iECH74115_1262.ECH74115_0095,iECSP_1301.ECSP_0090,iECs_1301.ECs0091,iG2583_1286.G2583_0091,iSDY_1059.SDY_0117,iZ_1308.Z0097,ic_1306.c0105 Glycos_transf_4,MraY_sig1 QTD1_k127_2407634_6 713586.KB900536_gene1375 2.096e-123 423.0 COG0771@1|root,COG0771@2|Bacteria,1MVYD@1224|Proteobacteria,1RP25@1236|Gammaproteobacteria,1WWI1@135613|Chromatiales 135613|Chromatiales M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) murD - 6.3.2.9 ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 - R02783 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase_C,Mur_ligase_M QTD1_k127_2407634_8 396588.Tgr7_0768 1.349e-110 380.0 COG0772@1|root,COG0772@2|Bacteria,1MVDB@1224|Proteobacteria,1RMIV@1236|Gammaproteobacteria,1WWCK@135613|Chromatiales 135613|Chromatiales M Peptidoglycan polymerase that is essential for cell division ftsW - - ko:K03588 ko04112,map04112 - - - ko00000,ko00001,ko02000,ko03036 2.A.103.1 - - FTSW_RODA_SPOVE QTD1_k127_2407634_7 1033802.SSPSH_000311 1.613e-120 397.0 COG0707@1|root,COG0707@2|Bacteria,1MVIB@1224|Proteobacteria,1RMQ3@1236|Gammaproteobacteria 1236|Gammaproteobacteria M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) murG GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0050511,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.4.1.227 ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 - R05032,R05662 RC00005,RC00049 ko00000,ko00001,ko01000,ko01011 - GT28 iSFV_1184.SFV_0083,iSF_1195.SF0087,iSFxv_1172.SFxv_0091,iS_1188.S0089 Glyco_tran_28_C,Glyco_transf_28 QTD1_k127_2407634_2 1390370.O203_05720 3.663e-169 562.0 COG0773@1|root,COG0773@2|Bacteria,1MV68@1224|Proteobacteria,1RN88@1236|Gammaproteobacteria,1YDS2@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria M Belongs to the MurCDEF family murC GO:0000166,GO:0000270,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008763,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034645,GO:0035639,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0046872,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.8 ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 - R03193 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - iECP_1309.ECP_0093 Mur_ligase,Mur_ligase_C,Mur_ligase_M QTD1_k127_2407634_10 187272.Mlg_2191 1.351e-98 347.0 COG0812@1|root,COG0812@2|Bacteria,1MXDH@1224|Proteobacteria,1RNXK@1236|Gammaproteobacteria,1WW8T@135613|Chromatiales 135613|Chromatiales M Cell wall formation murB - 1.3.1.98 ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 - R03191,R03192 RC02639 ko00000,ko00001,ko01000,ko01011 - - - FAD_binding_4,MurB_C QTD1_k127_2407634_9 187272.Mlg_2190 7.18e-101 355.0 COG1181@1|root,COG1181@2|Bacteria,1MUTB@1224|Proteobacteria,1RMTM@1236|Gammaproteobacteria,1WWYB@135613|Chromatiales 135613|Chromatiales M Belongs to the D-alanine--D-alanine ligase family ddl - 6.3.2.4 ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 - R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Dala_Dala_lig_C,Dala_Dala_lig_N QTD1_k127_2407634_12 1123261.AXDW01000010_gene425 2.178e-36 147.0 COG1589@1|root,COG1589@2|Bacteria,1N0T7@1224|Proteobacteria,1S9FJ@1236|Gammaproteobacteria,1X5H6@135614|Xanthomonadales 135614|Xanthomonadales D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly ftsQ - - ko:K03589 ko04112,map04112 - - - ko00000,ko00001,ko03036 - - - FtsQ,POTRA_1 QTD1_k127_2407634_1 1260251.SPISAL_06805 8.38e-202 636.0 COG0849@1|root,COG0849@2|Bacteria,1MUSR@1224|Proteobacteria,1RMXY@1236|Gammaproteobacteria,1WVUV@135613|Chromatiales 135613|Chromatiales D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring ftsA - - ko:K03590 ko04112,map04112 - - - ko00000,ko00001,ko03036,ko04812 - - - FtsA,SHS2_FTSA QTD1_k127_2407634_3 396588.Tgr7_0775 1.461e-152 499.0 COG0206@1|root,COG0206@2|Bacteria,1MV2X@1224|Proteobacteria,1RPZS@1236|Gammaproteobacteria,1WXJ6@135613|Chromatiales 135613|Chromatiales D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity ftsZ - - ko:K03531 ko04112,map04112 - - - ko00000,ko00001,ko02048,ko03036,ko04812 - - - FtsZ_C,Tubulin QTD1_k127_2407634_4 1163409.UUA_01899 3.506e-147 471.0 COG0774@1|root,COG0774@2|Bacteria,1MV6T@1224|Proteobacteria,1RQ72@1236|Gammaproteobacteria,1X38C@135614|Xanthomonadales 135614|Xanthomonadales M Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis lpxC - 3.5.1.108 ko:K02535 ko00540,ko01100,map00540,map01100 M00060 R04587 RC00166,RC00300 ko00000,ko00001,ko00002,ko01000,ko01005 - - - LpxC QTD1_k127_2407634_11 1121921.KB898706_gene2713 7.237e-80 276.0 COG0739@1|root,COG0739@2|Bacteria,1MVTF@1224|Proteobacteria,1RMIR@1236|Gammaproteobacteria,2PMP4@256005|Alteromonadales genera incertae sedis 1236|Gammaproteobacteria M Peptidase family M23 - - - - - - - - - - - - Peptidase_M23 QTD1_k127_2407634_0 472759.Nhal_0500 0.0 1166.0 COG0653@1|root,COG0653@2|Bacteria,1MUJZ@1224|Proteobacteria,1RM9M@1236|Gammaproteobacteria,1WWZC@135613|Chromatiales 135613|Chromatiales U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane secA - - ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4 - - SEC-C,SecA_DEAD,SecA_PP_bind,SecA_SW QTD1_k127_2407634_14 1005395.CSV86_06956 4.158e-35 143.0 COG0352@1|root,COG0494@1|root,COG0352@2|Bacteria,COG0494@2|Bacteria,1RCZM@1224|Proteobacteria,1RS3S@1236|Gammaproteobacteria,1YWRP@136845|Pseudomonas putida group 1236|Gammaproteobacteria HL Nudix hydrolase mutT GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008413,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017110,GO:0030145,GO:0033554,GO:0034641,GO:0035539,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044715,GO:0044716,GO:0046483,GO:0046872,GO:0046914,GO:0047429,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.6.1.55 ko:K03574 - - - - ko00000,ko01000,ko03400 - - iE2348C_1286.E2348C_0104,iSDY_1059.SDY_0129 NUDIX,NUDIX_4,TMP-TENI QTD1_k127_2407634_13 1260251.SPISAL_01235 1.487e-35 139.0 2CJPW@1|root,32SAH@2|Bacteria,1NAJ3@1224|Proteobacteria,1SAPE@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_2413679_5 880073.Calab_3584 1.022e-86 296.0 COG0297@1|root,COG0297@2|Bacteria,2NQKG@2323|unclassified Bacteria 2|Bacteria G Synthesizes alpha-1,4-glucan chains using ADP-glucose glgA GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 ko:K00703 ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026 M00565 R02421 RC00005 ko00000,ko00001,ko00002,ko01000,ko01003 - GT5 - Glyco_transf_5,Glycos_transf_1 QTD1_k127_2413679_9 765913.ThidrDRAFT_2863 3.656e-11 71.0 COG5608@1|root,COG5608@2|Bacteria,1N0K1@1224|Proteobacteria,1SASW@1236|Gammaproteobacteria,1X2ME@135613|Chromatiales 135613|Chromatiales S Late embryogenesis abundant protein - - - - - - - - - - - - LEA_2 QTD1_k127_2413679_3 187272.Mlg_0961 3.48e-134 441.0 COG1640@1|root,COG1640@2|Bacteria,1QTVJ@1224|Proteobacteria,1RMJW@1236|Gammaproteobacteria,1WWBR@135613|Chromatiales 135613|Chromatiales G PFAM glycoside hydrolase, family 77 - - 2.4.1.25 ko:K00705 ko00500,ko01100,map00500,map01100 - R05196 RC00049 ko00000,ko00001,ko01000 - GH77 - Glyco_hydro_77 QTD1_k127_2413679_1 1396858.Q666_01020 6.55e-185 595.0 COG1449@1|root,COG1449@2|Bacteria,1P2YJ@1224|Proteobacteria,1RPDG@1236|Gammaproteobacteria,469FR@72275|Alteromonadaceae 1236|Gammaproteobacteria G Belongs to the glycosyl hydrolase 57 family - - - - - - - - - - - - Glyco_hydro_57 QTD1_k127_2413679_2 765914.ThisiDRAFT_1725 4.146e-175 559.0 COG0448@1|root,COG0448@2|Bacteria,1MVTC@1224|Proteobacteria,1RP04@1236|Gammaproteobacteria,1WW77@135613|Chromatiales 135613|Chromatiales H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans glgC - 2.7.7.27 ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 M00565 R00948 RC00002 ko00000,ko00001,ko00002,ko01000 - - - Hexapep,NTP_transferase QTD1_k127_2413679_0 1123368.AUIS01000002_gene1536 2.494e-277 876.0 COG0058@1|root,COG0058@2|Bacteria,1MW4J@1224|Proteobacteria,1RN8P@1236|Gammaproteobacteria,2NCB0@225057|Acidithiobacillales 225057|Acidithiobacillales G Protein of unknown function (DUF3417) - - 2.4.1.1 ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 - R02111 - ko00000,ko00001,ko01000 - GT35 - DUF3417,Phosphorylase QTD1_k127_2413679_7 84531.JMTZ01000051_gene929 1.255e-35 139.0 COG1695@1|root,COG1695@2|Bacteria,1NJSY@1224|Proteobacteria,1SG6R@1236|Gammaproteobacteria,1X6UG@135614|Xanthomonadales 135614|Xanthomonadales K PadR family transcriptional regulator - - - ko:K10947 - - - - ko00000,ko03000 - - - PadR QTD1_k127_2413679_4 1163409.UUA_06759 2.608e-87 298.0 COG4709@1|root,COG4709@2|Bacteria,1NX5K@1224|Proteobacteria,1SPS6@1236|Gammaproteobacteria,1X34I@135614|Xanthomonadales 135614|Xanthomonadales S Putative sensor - - - - - - - - - - - - Sensor QTD1_k127_2413679_8 13690.CP98_00215 1.367e-29 124.0 COG1430@1|root,COG1430@2|Bacteria,1MZBJ@1224|Proteobacteria,2UBSI@28211|Alphaproteobacteria,2K5JY@204457|Sphingomonadales 204457|Sphingomonadales S Uncharacterized ACR, COG1430 - - - ko:K09005 - - - - ko00000 - - - DUF192 QTD1_k127_2413679_6 1123059.KB823014_gene173 5.819e-53 192.0 COG0457@1|root,COG0457@2|Bacteria,1REXI@1224|Proteobacteria,2UB1S@28211|Alphaproteobacteria,43XG9@69657|Hyphomonadaceae 28211|Alphaproteobacteria S Putative 2OG-Fe(II) oxygenase - - - - - - - - - - - - 2OG-FeII_Oxy_5,TPR_16,TPR_8 QTD1_k127_2418430_2 1449048.JQKU01000018_gene4257 2.373e-74 254.0 COG1012@1|root,COG1012@2|Bacteria,2GIWZ@201174|Actinobacteria,232VI@1762|Mycobacteriaceae 201174|Actinobacteria C Belongs to the aldehyde dehydrogenase family - - 1.2.1.3,1.2.99.10 ko:K00128,ko:K22445 ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130 M00135 R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146 RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500 ko00000,ko00001,ko00002,ko01000 - - - Aldedh QTD1_k127_2418430_1 395493.BegalDRAFT_2624 4.341e-84 285.0 COG0087@1|root,COG0087@2|Bacteria,1MUST@1224|Proteobacteria,1RMK9@1236|Gammaproteobacteria,4606F@72273|Thiotrichales 72273|Thiotrichales J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit rplC - - ko:K02906 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L3 QTD1_k127_2418430_3 349106.PsycPRwf_0427 1.611e-64 226.0 COG0088@1|root,COG0088@2|Bacteria,1MXPF@1224|Proteobacteria,1RNNK@1236|Gammaproteobacteria,3NK1G@468|Moraxellaceae 1236|Gammaproteobacteria J Forms part of the polypeptide exit tunnel rplD GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003700,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0006355,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008428,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030234,GO:0030371,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032069,GO:0032074,GO:0032268,GO:0032269,GO:0032991,GO:0032993,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042788,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0060255,GO:0060698,GO:0060699,GO:0060700,GO:0060701,GO:0060702,GO:0065003,GO:0065007,GO:0065009,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:0098772,GO:0140110,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990904,GO:2000112,GO:2000113,GO:2001141 - ko:K02926 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L4 QTD1_k127_2418430_7 1121004.ATVC01000003_gene525 9.873e-25 109.0 COG0089@1|root,COG0089@2|Bacteria,1MZXX@1224|Proteobacteria,2VU1C@28216|Betaproteobacteria,2KRGC@206351|Neisseriales 206351|Neisseriales J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome rplW - - ko:K02892 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L23 QTD1_k127_2418430_0 1205753.A989_13599 7.242e-119 391.0 COG0090@1|root,COG0090@2|Bacteria,1MVTD@1224|Proteobacteria,1RMGR@1236|Gammaproteobacteria,1X3GB@135614|Xanthomonadales 135614|Xanthomonadales J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity rplB GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02886 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L2,Ribosomal_L2_C QTD1_k127_2418430_5 314287.GB2207_06158 1.992e-39 162.0 COG0185@1|root,COG0185@2|Bacteria,1RGYX@1224|Proteobacteria,1S5VT@1236|Gammaproteobacteria,1J68S@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA rpsS GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02965 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S19 QTD1_k127_2418430_6 519989.ECTPHS_13083 5.578e-37 148.0 COG0091@1|root,COG0091@2|Bacteria,1RH0W@1224|Proteobacteria,1S5XT@1236|Gammaproteobacteria,1WYH7@135613|Chromatiales 135613|Chromatiales J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome rplV - - ko:K02890 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L22 QTD1_k127_2418430_4 555778.Hneap_0329 5.426e-50 180.0 COG0092@1|root,COG0092@2|Bacteria,1MUAI@1224|Proteobacteria,1RN0P@1236|Gammaproteobacteria,1WVYC@135613|Chromatiales 135613|Chromatiales J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation rpsC - - ko:K02982 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - KH_2,Ribosomal_S3_C QTD1_k127_2421691_5 926554.KI912673_gene2802 1.857e-80 285.0 COG2909@1|root,COG2909@2|Bacteria 2|Bacteria K trisaccharide binding - - - - - - - - - - - - AAA_16,GerE QTD1_k127_2421691_6 1122604.JONR01000009_gene2465 2.904e-73 273.0 COG1538@1|root,COG1538@2|Bacteria,1N23P@1224|Proteobacteria,1RMXN@1236|Gammaproteobacteria,1X8EQ@135614|Xanthomonadales 135614|Xanthomonadales MU Outer membrane efflux protein - - - - - - - - - - - - OEP QTD1_k127_2421691_1 1122604.JONR01000057_gene3541 4.196e-195 616.0 COG0446@1|root,COG0446@2|Bacteria,1QUQF@1224|Proteobacteria,1RP1H@1236|Gammaproteobacteria,1X5BD@135614|Xanthomonadales 135614|Xanthomonadales S Pyridine nucleotide-disulphide oxidoreductase - - 1.8.5.4 ko:K17218 ko00920,map00920 - R10152 RC03155 ko00000,ko00001,ko01000 - - - Pyr_redox_2 QTD1_k127_2421691_0 396588.Tgr7_1129 0.0 1315.0 COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,1RMBN@1236|Gammaproteobacteria,1WWJ6@135613|Chromatiales 135613|Chromatiales V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ACR_tran QTD1_k127_2421691_3 765910.MARPU_00825 3.615e-89 306.0 COG0845@1|root,COG0845@2|Bacteria,1NQZ0@1224|Proteobacteria,1RR67@1236|Gammaproteobacteria,1WX31@135613|Chromatiales 135613|Chromatiales M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - HlyD_D23 QTD1_k127_2421691_12 1547437.LL06_07775 4.433e-24 103.0 COG0607@1|root,32YCZ@2|Bacteria,1N6NN@1224|Proteobacteria,2UFC1@28211|Alphaproteobacteria,43M28@69277|Phyllobacteriaceae 28211|Alphaproteobacteria P Sulfurtransferase - - - - - - - - - - - - DUF2892 QTD1_k127_2421691_11 1134474.O59_002543 1.643e-25 109.0 COG0640@1|root,COG0640@2|Bacteria,1N72Q@1224|Proteobacteria,1SCH5@1236|Gammaproteobacteria,1FHG3@10|Cellvibrio 1236|Gammaproteobacteria K helix_turn_helix, Arsenical Resistance Operon Repressor - - - ko:K22042 - - - - ko00000,ko03000 - - - HTH_20,HTH_5 QTD1_k127_2421691_8 1121937.AUHJ01000015_gene111 1.225e-36 149.0 COG1764@1|root,COG1764@2|Bacteria,1RJIP@1224|Proteobacteria,1S6QM@1236|Gammaproteobacteria 1236|Gammaproteobacteria O redox protein regulator of disulfide bond formation - - - - - - - - - - - - OsmC QTD1_k127_2421691_7 243233.MCA0141 8.872e-62 232.0 COG1881@1|root,COG1881@2|Bacteria,1N0Y4@1224|Proteobacteria,1S400@1236|Gammaproteobacteria,1XF3U@135618|Methylococcales 135618|Methylococcales S PFAM Phosphatidylethanolamine-binding protein - - - ko:K06910 - - - - ko00000 - - - PBP QTD1_k127_2421691_2 330214.NIDE3598 2.13e-142 458.0 COG0702@1|root,COG0702@2|Bacteria 2|Bacteria GM epimerase - - - - - - - - - - - - NmrA QTD1_k127_2421691_9 330214.NIDE2814 1.264e-36 143.0 COG0607@1|root,COG0607@2|Bacteria,3J1F1@40117|Nitrospirae 40117|Nitrospirae P Rhodanese Homology Domain - - - - - - - - - - - - Rhodanese QTD1_k127_2421691_10 1452718.JBOY01000002_gene468 1.247e-29 131.0 COG0589@1|root,COG0589@2|Bacteria,1MVZS@1224|Proteobacteria,1RPAE@1236|Gammaproteobacteria 1236|Gammaproteobacteria T universal stress protein ydaA - - ko:K14055 - - - - ko00000 - - - Usp QTD1_k127_2421691_4 518766.Rmar_1623 1.548e-83 283.0 COG3291@1|root,COG3291@2|Bacteria,4PMYH@976|Bacteroidetes 976|Bacteroidetes S Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 QTD1_k127_2472340_41 1340493.JNIF01000003_gene3068 1.102e-05 52.0 2F63Z@1|root,33YN9@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - QTD1_k127_2472340_35 1449044.JMLE01000003_gene2828 6.566e-20 92.0 COG2346@1|root,COG2346@2|Bacteria,2GMG5@201174|Actinobacteria 201174|Actinobacteria S Bacterial-like globin - - - ko:K06886 - - - - ko00000 - - - Bac_globin QTD1_k127_2472340_29 1267535.KB906767_gene5141 2.002e-32 133.0 COG0823@1|root,COG3710@1|root,COG0823@2|Bacteria,COG3710@2|Bacteria,3Y3FE@57723|Acidobacteria 57723|Acidobacteria KU WD40 domain protein beta Propeller - - - - - - - - - - - - PD40,Trans_reg_C QTD1_k127_2472340_6 1267534.KB906758_gene2213 7.086e-140 465.0 COG1680@1|root,COG1680@2|Bacteria,3Y6MA@57723|Acidobacteria 57723|Acidobacteria V PFAM Beta-lactamase - - - - - - - - - - - - Beta-lactamase QTD1_k127_2472340_36 1500259.JQLD01000005_gene322 5.915e-13 75.0 COG3631@1|root,COG3631@2|Bacteria,1RDKP@1224|Proteobacteria,2U8HD@28211|Alphaproteobacteria,4BFN8@82115|Rhizobiaceae 28211|Alphaproteobacteria S SnoaL-like domain - - - - - - - - - - - - SnoaL_2 QTD1_k127_2472340_23 378806.STAUR_1329 9.889e-45 169.0 COG3832@1|root,COG3832@2|Bacteria,1RIAJ@1224|Proteobacteria 1224|Proteobacteria S Activator of Hsp90 ATPase homolog 1-like protein - - - - - - - - - - - - AHSA1 QTD1_k127_2472340_25 1123242.JH636436_gene353 8.321e-40 152.0 COG0640@1|root,COG0640@2|Bacteria,2J0DW@203682|Planctomycetes 203682|Planctomycetes K helix_turn_helix, Arsenical Resistance Operon Repressor - - - - - - - - - - - - HTH_20,HTH_5 QTD1_k127_2472340_2 1122612.AUBA01000007_gene1062 6.965e-187 595.0 COG5368@1|root,COG5368@2|Bacteria,1NX2K@1224|Proteobacteria,2U1B2@28211|Alphaproteobacteria,2K0T2@204457|Sphingomonadales 204457|Sphingomonadales S Putative glucoamylase - - - - - - - - - - - - Glycoamylase QTD1_k127_2472340_42 1300345.LF41_1385 0.0002224 46.0 COG0531@1|root,COG0531@2|Bacteria,1MUA2@1224|Proteobacteria,1RQ1P@1236|Gammaproteobacteria,1X5A0@135614|Xanthomonadales 135614|Xanthomonadales E amino acid - - - - - - - - - - - - AA_permease_2 QTD1_k127_2472340_32 927658.AJUM01000022_gene1193 6.107e-27 113.0 COG4430@1|root,COG5646@1|root,COG4430@2|Bacteria,COG5646@2|Bacteria,4P9D6@976|Bacteroidetes,2G1H9@200643|Bacteroidia,3XKZW@558415|Marinilabiliaceae 976|Bacteroidetes S Domain of unknown function (DU1801) - - - - - - - - - - - - DUF1801 QTD1_k127_2472340_37 420662.Mpe_A1019 2.568e-08 61.0 COG2199@1|root,COG3706@2|Bacteria,1NC00@1224|Proteobacteria,2VQIK@28216|Betaproteobacteria,1KKST@119065|unclassified Burkholderiales 28216|Betaproteobacteria T diguanylate cyclase - - 2.7.7.65 ko:K13590 ko04112,map04112 - - - ko00000,ko00001,ko01000 - - - GGDEF QTD1_k127_2472340_3 396588.Tgr7_0530 5.569e-167 535.0 COG0012@1|root,COG0012@2|Bacteria,1MVM4@1224|Proteobacteria,1RMBI@1236|Gammaproteobacteria,1WWWF@135613|Chromatiales 135613|Chromatiales J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner ychF - - ko:K06942 - - - - ko00000,ko03009 - - - MMR_HSR1,YchF-GTPase_C QTD1_k127_2472340_16 519989.ECTPHS_02436 3.263e-63 222.0 COG0193@1|root,COG0193@2|Bacteria,1MX1P@1224|Proteobacteria,1RPK3@1236|Gammaproteobacteria,1WWEP@135613|Chromatiales 135613|Chromatiales J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis pth - 3.1.1.29 ko:K01056 - - - - ko00000,ko01000,ko03012 - - - Pept_tRNA_hydro QTD1_k127_2472340_20 1122603.ATVI01000005_gene2903 1.598e-53 198.0 COG1825@1|root,COG1825@2|Bacteria,1RDH0@1224|Proteobacteria,1S46A@1236|Gammaproteobacteria,1X34R@135614|Xanthomonadales 135614|Xanthomonadales J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance ctc GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02897 ko03010,map03010 M00178 - - ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L25p,Ribosomal_TL5_C QTD1_k127_2472340_4 1123261.AXDW01000006_gene2464 7.347e-144 462.0 COG0462@1|root,COG0462@2|Bacteria,1MW21@1224|Proteobacteria,1RMUC@1236|Gammaproteobacteria,1X3Z0@135614|Xanthomonadales 135614|Xanthomonadales F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) prs - 2.7.6.1 ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 M00005 R01049 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - Pribosyl_synth,Pribosyltran_N QTD1_k127_2472340_9 572477.Alvin_2383 3.854e-95 327.0 COG1947@1|root,COG1947@2|Bacteria,1MVU3@1224|Proteobacteria,1RP23@1236|Gammaproteobacteria,1WX6F@135613|Chromatiales 135613|Chromatiales I Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol ispE - 2.7.1.148 ko:K00919 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05634 RC00002,RC01439 ko00000,ko00001,ko00002,ko01000 - - - GHMP_kinases_C,GHMP_kinases_N QTD1_k127_2472340_30 1121937.AUHJ01000014_gene2583 2.328e-29 124.0 COG3017@1|root,COG3017@2|Bacteria,1N02T@1224|Proteobacteria,1S91E@1236|Gammaproteobacteria,468AP@72275|Alteromonadaceae 1236|Gammaproteobacteria M Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein lolB GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006807,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009279,GO:0010876,GO:0016020,GO:0019538,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0033218,GO:0034613,GO:0042157,GO:0042277,GO:0043170,GO:0044238,GO:0044462,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051641,GO:0051668,GO:0070727,GO:0071704,GO:0071723,GO:0071944,GO:0072657,GO:1901564 - ko:K02494 - - - - ko00000 - - - LolB QTD1_k127_2472340_22 1397527.Q670_13570 2.552e-45 189.0 COG0457@1|root,COG0457@2|Bacteria,1MYB8@1224|Proteobacteria,1RQIX@1236|Gammaproteobacteria,1XI7D@135619|Oceanospirillales 135619|Oceanospirillales H COG0457 FOG TPR repeat - - - - - - - - - - - - TPR_14,TPR_16,TPR_19,TPR_6,TPR_8 QTD1_k127_2472340_5 686340.Metal_3340 1.319e-142 462.0 COG0216@1|root,COG0216@2|Bacteria,1MV28@1224|Proteobacteria,1RM7Q@1236|Gammaproteobacteria,1XEPW@135618|Methylococcales 135618|Methylococcales J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA prfA - - ko:K02835 - - - - ko00000,ko03012 - - - PCRF,RF-1 QTD1_k127_2472340_24 1116472.MGMO_120c00590 1.149e-43 177.0 COG1714@1|root,COG1714@2|Bacteria,1RIE9@1224|Proteobacteria,1S566@1236|Gammaproteobacteria 1236|Gammaproteobacteria S membrane protein domain - - - - - - - - - - - - RDD QTD1_k127_2472340_17 1116472.MGMO_120c00580 7.574e-63 229.0 COG1300@1|root,COG1300@2|Bacteria,1Q1GN@1224|Proteobacteria,1RR61@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Membrane - - - - - - - - - - - - SpoIIM QTD1_k127_2472340_33 522373.Smlt4486 4.431e-26 124.0 COG1721@1|root,COG1721@2|Bacteria,1MXDI@1224|Proteobacteria,1RQSS@1236|Gammaproteobacteria,1X3P2@135614|Xanthomonadales 135614|Xanthomonadales S conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - - - - - - - - - - DUF58 QTD1_k127_2472340_11 1116472.MGMO_120c00610 1.788e-87 310.0 COG0714@1|root,COG0714@2|Bacteria,1MUFN@1224|Proteobacteria,1RN5G@1236|Gammaproteobacteria,1XESU@135618|Methylococcales 1224|Proteobacteria S associated with various cellular activities - - - ko:K03924 - - - - ko00000,ko01000 - - - AAA_3 QTD1_k127_2472340_38 68260.JOAY01000017_gene3455 2.989e-08 64.0 COG5180@1|root,COG5180@2|Bacteria,2GKJ7@201174|Actinobacteria 201174|Actinobacteria A pathogenesis - - - - - - - - - - - - GPDPase_memb QTD1_k127_2472340_15 1397528.Q671_07050 2.224e-66 245.0 COG2890@1|root,COG2890@2|Bacteria,1MXCQ@1224|Proteobacteria,1RNGK@1236|Gammaproteobacteria,1XJ61@135619|Oceanospirillales 135619|Oceanospirillales J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif prmC - 2.1.1.297 ko:K02493 - - R10806 RC00003,RC03279 ko00000,ko01000,ko03012 - - - MTS,Methyltransf_31 QTD1_k127_2472340_19 118005.AWNK01000010_gene405 3.933e-57 215.0 COG0652@1|root,COG0652@2|Bacteria 2|Bacteria O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides ppiB - 5.2.1.8 ko:K03767,ko:K03768 ko01503,ko04217,map01503,map04217 - - - ko00000,ko00001,ko01000,ko03110,ko04147 - - - Pro_isomerase QTD1_k127_2472340_13 1163407.UU7_09250 1.454e-76 264.0 COG0744@1|root,COG0744@2|Bacteria,1RDAQ@1224|Proteobacteria,1RMGB@1236|Gammaproteobacteria,1X4AQ@135614|Xanthomonadales 135614|Xanthomonadales M Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors mtgA - 2.4.1.129 ko:K03814 ko00550,map00550 - - - ko00000,ko00001,ko01000,ko01003,ko01011 - GT51 - Transgly QTD1_k127_2472340_21 290397.Adeh_3534 9.183e-49 188.0 COG0501@1|root,COG0501@2|Bacteria,1NK9F@1224|Proteobacteria,42TCQ@68525|delta/epsilon subdivisions,2WM2D@28221|Deltaproteobacteria,2Z3H6@29|Myxococcales 28221|Deltaproteobacteria O Peptidase family M48 - - - - - - - - - - - - Peptidase_M48 QTD1_k127_2472340_14 404589.Anae109_2661 2.244e-75 269.0 COG4269@1|root,COG4269@2|Bacteria,1MW5P@1224|Proteobacteria,42R97@68525|delta/epsilon subdivisions,2WMRA@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Bacterial protein of unknown function (DUF898) - - - - - - - - - - - - DUF898 QTD1_k127_2472340_27 1120919.AUBI01000022_gene2533 3.259e-34 138.0 COG4319@1|root,COG4319@2|Bacteria,1RHQX@1224|Proteobacteria,2UIX6@28211|Alphaproteobacteria,2JUSS@204441|Rhodospirillales 204441|Rhodospirillales S Calcium/calmodulin dependent protein kinase II association domain - - - - - - - - - - - - SnoaL_3 QTD1_k127_2472340_7 1210884.HG799463_gene9607 8.86e-121 403.0 COG2382@1|root,COG2382@2|Bacteria,2IYMZ@203682|Planctomycetes 203682|Planctomycetes P Putative esterase - - - ko:K07214 - - - - ko00000 - - - Esterase QTD1_k127_2472340_10 29581.BW37_01973 2.05e-89 310.0 COG1680@1|root,COG1680@2|Bacteria,1MVPR@1224|Proteobacteria,2VMB2@28216|Betaproteobacteria,477K1@75682|Oxalobacteraceae 28216|Betaproteobacteria V Beta-lactamase - - - - - - - - - - - - Beta-lactamase QTD1_k127_2472340_28 243159.AFE_2086 1.712e-33 137.0 COG0071@1|root,COG0071@2|Bacteria,1N7C7@1224|Proteobacteria,1S607@1236|Gammaproteobacteria 1236|Gammaproteobacteria O Belongs to the small heat shock protein (HSP20) family hspA - - ko:K13993 ko04141,map04141 - - - ko00000,ko00001,ko03110 - - - HSP20 QTD1_k127_2472340_1 983917.RGE_31330 1.472e-308 977.0 COG2366@1|root,COG2366@2|Bacteria,1MVMH@1224|Proteobacteria,2VIWI@28216|Betaproteobacteria,1KM79@119065|unclassified Burkholderiales 28216|Betaproteobacteria C Penicillin amidase - - 3.5.1.11 ko:K01434 ko00311,ko01130,map00311,map01130 - R02170 RC00166,RC00328 ko00000,ko00001,ko01000,ko01002 - - - Penicil_amidase QTD1_k127_2472340_31 67315.JOBD01000002_gene2905 3.356e-29 120.0 COG0607@1|root,COG0607@2|Bacteria,2IN5N@201174|Actinobacteria 201174|Actinobacteria P Rhodanese Homology Domain - - - - - - - - - - - - Rhodanese QTD1_k127_2472340_12 1041146.ATZB01000007_gene2909 4.111e-86 302.0 COG0583@1|root,COG0583@2|Bacteria,1PX1B@1224|Proteobacteria,2TUE7@28211|Alphaproteobacteria,4BM7Q@82115|Rhizobiaceae 28211|Alphaproteobacteria K LysR substrate binding domain - - - - - - - - - - - - HTH_1,LysR_substrate QTD1_k127_2472340_0 1166948.JPZL01000001_gene2028 0.0 1607.0 COG0646@1|root,COG1410@1|root,COG0646@2|Bacteria,COG1410@2|Bacteria,1MV6G@1224|Proteobacteria,1RMYD@1236|Gammaproteobacteria,1XHB4@135619|Oceanospirillales 135619|Oceanospirillales E Methionine synthase metH - 2.1.1.13 ko:K00548 ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230 M00017 R00946,R09365 RC00035,RC00113,RC01241 ko00000,ko00001,ko00002,ko01000 - - - B12-binding,B12-binding_2,Met_synt_B12,Pterin_bind,S-methyl_trans QTD1_k127_2472340_8 1279038.KB907348_gene3042 4.503e-117 393.0 COG0685@1|root,COG0685@2|Bacteria,1MUC9@1224|Proteobacteria,2TQZA@28211|Alphaproteobacteria,2JQ95@204441|Rhodospirillales 204441|Rhodospirillales E Methylenetetrahydrofolate reductase metF - 1.5.1.20 ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 M00377 R01224,R07168 RC00081 ko00000,ko00001,ko00002,ko01000 - - - MTHFR QTD1_k127_2472340_34 1502851.FG93_01531 2.457e-23 111.0 COG0500@1|root,COG0640@1|root,COG0640@2|Bacteria,COG2226@2|Bacteria,1NFSV@1224|Proteobacteria,2TSMV@28211|Alphaproteobacteria,3K61B@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria KQ helix_turn_helix, Arsenical Resistance Operon Repressor arsR - - - - - - - - - - - HTH_20,HTH_5,Methyltransf_11,Methyltransf_31 QTD1_k127_2472340_18 1158760.AQXP01000031_gene872 7.736e-62 224.0 COG1281@1|root,COG1281@2|Bacteria,1MUMU@1224|Proteobacteria,1RMP3@1236|Gammaproteobacteria,1WWKK@135613|Chromatiales 135613|Chromatiales O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress hslO - - ko:K04083 - - - - ko00000,ko03110 - - - HSP33 QTD1_k127_2481814_4 1122604.JONR01000013_gene3213 1.898e-72 254.0 COG0583@1|root,COG0583@2|Bacteria,1MWY0@1224|Proteobacteria,1RP7Q@1236|Gammaproteobacteria,1X337@135614|Xanthomonadales 135614|Xanthomonadales K Transcriptional regulator - - - ko:K03566 ko02026,map02026 - - - ko00000,ko00001,ko03000 - - - HTH_1,LysR_substrate QTD1_k127_2481814_6 319003.Bra1253DRAFT_06637 4.872e-60 216.0 28JPA@1|root,2Z9FC@2|Bacteria,1PN1F@1224|Proteobacteria,2TSKX@28211|Alphaproteobacteria,3JT6R@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_2481814_0 1121918.ARWE01000001_gene386 3.64e-266 847.0 COG0612@1|root,COG0612@2|Bacteria,1MVST@1224|Proteobacteria,42NYP@68525|delta/epsilon subdivisions,2WIPJ@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Belongs to the peptidase M16 family - - - ko:K07263 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M16,Peptidase_M16_C QTD1_k127_2481814_8 1056820.KB900657_gene4174 1.888e-18 94.0 COG2885@1|root,COG2885@2|Bacteria,1RIG3@1224|Proteobacteria,1S5WW@1236|Gammaproteobacteria,2PNP4@256005|Alteromonadales genera incertae sedis 1236|Gammaproteobacteria M OmpA family - - - - - - - - - - - - DUF4398,OmpA QTD1_k127_2481814_7 1380391.JIAS01000020_gene1471 1.424e-24 119.0 COG3450@1|root,COG3450@2|Bacteria,1N0F7@1224|Proteobacteria,2UG5M@28211|Alphaproteobacteria,2JUD0@204441|Rhodospirillales 204441|Rhodospirillales S Protein of unknown function (DUF861) - - - - - - - - - - - - Cupin_3 QTD1_k127_2481814_2 1487953.JMKF01000022_gene2509 2.549e-201 642.0 COG0161@1|root,COG0161@2|Bacteria,1G1QE@1117|Cyanobacteria,1H9SQ@1150|Oscillatoriales 1117|Cyanobacteria E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family bioA - 2.6.1.18,2.6.1.62 ko:K00822,ko:K00833 ko00280,ko00410,ko00640,ko00780,ko01100,map00280,map00410,map00640,map00780,map01100 M00123,M00573,M00577 R00907,R03231,R04187 RC00006,RC00008,RC00062,RC00160,RC00887 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_3 QTD1_k127_2481814_5 243365.CV_2021 1.138e-66 232.0 COG0662@1|root,COG1396@1|root,COG0662@2|Bacteria,COG1396@2|Bacteria,1RCYA@1224|Proteobacteria,2WGXA@28216|Betaproteobacteria,2KU4A@206351|Neisseriales 206351|Neisseriales K Cupin domain - - - - - - - - - - - - Cupin_2,HTH_3 QTD1_k127_2481814_1 395493.BegalDRAFT_3544 1.58e-216 682.0 COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,1RMBQ@1236|Gammaproteobacteria,45ZY8@72273|Thiotrichales 72273|Thiotrichales C Belongs to the aldehyde dehydrogenase family - - 1.2.1.8 ko:K00130 ko00260,ko01100,map00260,map01100 M00555 R02565,R02566 RC00080 ko00000,ko00001,ko00002,ko01000 - - - Aldedh QTD1_k127_2481814_3 243233.MCA0712 1.496e-200 644.0 COG0116@1|root,COG1092@1|root,COG0116@2|Bacteria,COG1092@2|Bacteria,1MUQM@1224|Proteobacteria,1RNMH@1236|Gammaproteobacteria,1XEC9@135618|Methylococcales 135618|Methylococcales J Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA rlmL - 2.1.1.173,2.1.1.264 ko:K12297 - - R07234 RC00003 ko00000,ko01000,ko03009 - - - Methyltrans_SAM,THUMP,UPF0020 QTD1_k127_2482771_5 1192034.CAP_4717 4.18e-06 49.0 COG0009@1|root,COG0009@2|Bacteria,1MVPM@1224|Proteobacteria,42T6S@68525|delta/epsilon subdivisions,2WP34@28221|Deltaproteobacteria,2YV20@29|Myxococcales 28221|Deltaproteobacteria J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine yrdC1 - 2.7.7.87 ko:K07566 - - R10463 RC00745 ko00000,ko01000,ko03009,ko03016 - - - SUA5,Sua5_yciO_yrdC QTD1_k127_2482771_0 1348114.OM33_12230 1.19e-132 433.0 COG0019@1|root,COG0019@2|Bacteria,1MZ7Y@1224|Proteobacteria,1RQJ4@1236|Gammaproteobacteria,2Q20P@267888|Pseudoalteromonadaceae 1236|Gammaproteobacteria E Belongs to the Orn Lys Arg decarboxylase class-II family speC - 4.1.1.17,4.1.1.20 ko:K01581,ko:K01586 ko00300,ko00330,ko00480,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map00330,map00480,map01100,map01110,map01120,map01130,map01230 M00016,M00134,M00525,M00526,M00527 R00451,R00670 RC00299 ko00000,ko00001,ko00002,ko01000 - - iJN746.PP_0864 Orn_Arg_deC_N,Orn_DAP_Arg_deC QTD1_k127_2482771_4 1121918.ARWE01000001_gene2356 3.583e-35 145.0 COG1011@1|root,COG1011@2|Bacteria,1Q2A2@1224|Proteobacteria,42WDV@68525|delta/epsilon subdivisions,2WRQS@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Haloacid dehalogenase-like hydrolase - - 3.1.3.10 ko:K07025,ko:K20866 ko00010,ko01120,map00010,map01120 - R00947 RC00078 ko00000,ko00001,ko01000 - - - HAD_2 QTD1_k127_2482771_3 1124983.PFLCHA0_c28400 9.221e-43 162.0 COG0537@1|root,COG0537@2|Bacteria,1N3B7@1224|Proteobacteria 1224|Proteobacteria FG adenosine 5'-monophosphoramidase activity - - - - - - - - - - - - HIT QTD1_k127_2482771_2 1121918.ARWE01000001_gene1848 2.493e-43 175.0 COG0545@1|root,COG0545@2|Bacteria,1RDA1@1224|Proteobacteria,42QU4@68525|delta/epsilon subdivisions,2WMRQ@28221|Deltaproteobacteria,43SHI@69541|Desulfuromonadales 28221|Deltaproteobacteria M Domain amino terminal to FKBP-type peptidyl-prolyl isomerase - - 5.2.1.8 ko:K01802,ko:K03772,ko:K03773 - - - - ko00000,ko01000,ko03110 - - - FKBP_C,FKBP_N QTD1_k127_2482771_1 1037409.BJ6T_05540 2.068e-57 202.0 COG0625@1|root,COG0625@2|Bacteria,1MXHH@1224|Proteobacteria,2TVGY@28211|Alphaproteobacteria,3JV1Y@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria O Belongs to the GST superfamily MA20_25055 - 2.5.1.18 ko:K00799 ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418 - R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905 RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944 ko00000,ko00001,ko01000,ko02000 1.A.12.2.2,1.A.12.3.2 - - GST_C,GST_C_2,GST_C_3,GST_N QTD1_k127_2523377_0 511062.GU3_03240 2.109e-177 560.0 COG1063@1|root,COG1063@2|Bacteria,1MV9A@1224|Proteobacteria,1RMNY@1236|Gammaproteobacteria,1Y4JS@135624|Aeromonadales 135624|Aeromonadales C Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate tdh - 1.1.1.103 ko:K00060 ko00260,map00260 - R01465 RC00525 ko00000,ko00001,ko01000 - - - ADH_N,ADH_zinc_N QTD1_k127_2523377_1 1122603.ATVI01000005_gene3347 1.417e-143 476.0 COG0616@1|root,COG0616@2|Bacteria,1MUXE@1224|Proteobacteria,1RNYW@1236|Gammaproteobacteria,1X31T@135614|Xanthomonadales 135614|Xanthomonadales OU signal peptide peptidase sppA - - ko:K04773 - - - - ko00000,ko01000,ko01002 - - - Peptidase_S49 QTD1_k127_2523377_2 396588.Tgr7_0849 8.53e-52 185.0 COG0335@1|root,COG0335@2|Bacteria,1RH3A@1224|Proteobacteria,1S5XX@1236|Gammaproteobacteria,1WYID@135613|Chromatiales 135613|Chromatiales J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site rplS - - ko:K02884 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L19 QTD1_k127_2523377_3 83406.HDN1F_22420 7.682e-43 159.0 COG0336@1|root,COG0336@2|Bacteria,1MUN1@1224|Proteobacteria,1RMWC@1236|Gammaproteobacteria,1J4M2@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria J Belongs to the RNA methyltransferase TrmD family trmD GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 ko:K00554 - - R00597 RC00003,RC00334 ko00000,ko01000,ko03016 - - - tRNA_m1G_MT QTD1_k127_254574_2 1294143.H681_16145 8.232e-65 228.0 COG1136@1|root,COG1136@2|Bacteria,1MVSQ@1224|Proteobacteria,1RMWK@1236|Gammaproteobacteria 1236|Gammaproteobacteria V Part of the ABC transporter complex LolCDE involved in the translocation of lolD GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0015399,GO:0015405,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051234,GO:0051641,GO:0055085,GO:0070727,GO:0071944,GO:0072657,GO:0089705,GO:0097159,GO:0097367,GO:0098796,GO:0098797,GO:1901265,GO:1901363,GO:1990778 - ko:K09810 ko02010,map02010 M00255 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.125 - - ABC_tran QTD1_k127_254574_0 713586.KB900536_gene306 3.415e-128 422.0 COG4591@1|root,COG4591@2|Bacteria,1MVV7@1224|Proteobacteria,1RMP9@1236|Gammaproteobacteria,1WW0V@135613|Chromatiales 135613|Chromatiales M lipoprotein releasing system, transmembrane protein, LolC E family - - - ko:K09808 ko02010,map02010 M00255 - - ko00000,ko00001,ko00002,ko02000 3.A.1.125 - - FtsX,MacB_PCD QTD1_k127_254574_1 323261.Noc_2669 7.429e-100 340.0 COG4591@1|root,COG4591@2|Bacteria,1MVV7@1224|Proteobacteria,1RMP9@1236|Gammaproteobacteria,1WW0V@135613|Chromatiales 135613|Chromatiales M lipoprotein releasing system, transmembrane protein, LolC E family - - - ko:K09808 ko02010,map02010 M00255 - - ko00000,ko00001,ko00002,ko02000 3.A.1.125 - - FtsX,MacB_PCD QTD1_k127_2551274_3 713586.KB900536_gene2596 2.778e-95 314.0 COG0006@1|root,COG0006@2|Bacteria,1MUZS@1224|Proteobacteria,1RN0W@1236|Gammaproteobacteria,1WWJH@135613|Chromatiales 135613|Chromatiales E peptidase M24B, X-Pro dipeptidase aminopeptidase - - 3.4.11.9 ko:K01262 - - - - ko00000,ko01000,ko01002 - - - AMP_N,Peptidase_M24 QTD1_k127_2551274_2 768671.ThimaDRAFT_1411 3.042e-100 340.0 COG0654@1|root,COG0654@2|Bacteria,1MU6I@1224|Proteobacteria,1RMS3@1236|Gammaproteobacteria,1WW09@135613|Chromatiales 135613|Chromatiales CH Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 - - - ko:K03185 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00117 R04989,R08773 RC02670 ko00000,ko00001,ko00002,ko01000 - - - FAD_binding_3 QTD1_k127_2551274_4 1123401.JHYQ01000038_gene1589 2.297e-76 271.0 COG0654@1|root,COG0654@2|Bacteria,1MU6I@1224|Proteobacteria,1RND5@1236|Gammaproteobacteria,46024@72273|Thiotrichales 72273|Thiotrichales CH Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 - - - ko:K18800 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00117 R04987,R08768 RC00046 ko00000,ko00001,ko00002,ko01000 - - - FAD_binding_3 QTD1_k127_2551274_7 335283.Neut_2288 5.035e-34 146.0 COG2154@1|root,COG2154@2|Bacteria,1RH99@1224|Proteobacteria,2WFUX@28216|Betaproteobacteria 28216|Betaproteobacteria H pterin-4-alpha-carbinolamine dehydratase - - 4.2.1.96 ko:K01724 ko00790,map00790 - R04734 RC01208 ko00000,ko00001,ko01000,ko04147 - - - Pterin_4a QTD1_k127_2551274_0 522306.CAP2UW1_2111 3.888e-200 629.0 COG0821@1|root,COG0821@2|Bacteria,1MUAX@1224|Proteobacteria,2VID7@28216|Betaproteobacteria,1KQGI@119066|unclassified Betaproteobacteria 28216|Betaproteobacteria I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate ispG - 1.17.7.1,1.17.7.3 ko:K03526 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R08689,R10859 RC01486 ko00000,ko00001,ko00002,ko01000 - - - GcpE QTD1_k127_2551274_1 396588.Tgr7_2759 4.343e-140 453.0 COG0404@1|root,COG0404@2|Bacteria,1MV96@1224|Proteobacteria,1RN2A@1236|Gammaproteobacteria,1WWZ0@135613|Chromatiales 135613|Chromatiales E The glycine cleavage system catalyzes the degradation of glycine gcvT - 2.1.2.10 ko:K00605 ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200 M00532 R01221,R02300,R04125 RC00022,RC00069,RC00183,RC02834 ko00000,ko00001,ko00002,ko01000 - - - GCV_T,GCV_T_C QTD1_k127_2551274_5 349124.Hhal_1191 5.92e-47 171.0 COG0509@1|root,COG0509@2|Bacteria,1RGV7@1224|Proteobacteria,1S656@1236|Gammaproteobacteria,1WYGS@135613|Chromatiales 135613|Chromatiales E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein gcvH - - ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 M00532 R01221 RC00022,RC02834 ko00000,ko00001,ko00002 - - - GCV_H QTD1_k127_2551274_6 1123073.KB899241_gene1985 1.447e-36 145.0 COG0403@1|root,COG0403@2|Bacteria,1MVC1@1224|Proteobacteria,1RPGZ@1236|Gammaproteobacteria,1X3XE@135614|Xanthomonadales 135614|Xanthomonadales E Glycine cleavage system P-protein - - 1.4.4.2 ko:K00282 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 - R01221,R03425 RC00022,RC00929,RC02834,RC02880 ko00000,ko00001,ko01000 - - - GDC-P QTD1_k127_2559956_0 667632.KB890164_gene2040 2.275e-138 448.0 COG2223@1|root,COG2223@2|Bacteria,1MXAA@1224|Proteobacteria,2VN1F@28216|Betaproteobacteria,1K0E3@119060|Burkholderiaceae 28216|Betaproteobacteria P PFAM major facilitator superfamily MFS_1 fsr - - ko:K08223 - - - - ko00000,ko02000 2.A.1.35 - - MFS_1 QTD1_k127_2559956_3 1049564.TevJSym_as00220 5.295e-22 107.0 COG0662@1|root,COG0662@2|Bacteria,1RHRM@1224|Proteobacteria,1S2VE@1236|Gammaproteobacteria 1236|Gammaproteobacteria G Cupin 2, conserved barrel domain protein - - - - - - - - - - - - FdtA QTD1_k127_2559956_1 234267.Acid_4156 1.026e-102 340.0 COG2513@1|root,COG2513@2|Bacteria,3Y34U@57723|Acidobacteria 57723|Acidobacteria G Phosphoenolpyruvate phosphomutase - - - - - - - - - - - - PEP_mutase QTD1_k127_2559956_2 402881.Plav_0507 2.238e-44 171.0 COG5309@1|root,COG5309@2|Bacteria 2|Bacteria G chondroitin AC lyase activity - - - - - - - - - - - - - QTD1_k127_2596835_8 1500894.JQNN01000001_gene1037 9.443e-61 215.0 COG1960@1|root,COG1960@2|Bacteria,1MU20@1224|Proteobacteria,2VHMA@28216|Betaproteobacteria,47254@75682|Oxalobacteraceae 28216|Betaproteobacteria I Acyl-CoA dehydrogenase, C-terminal domain aidB - - ko:K09456 - - - - ko00000 - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M QTD1_k127_2596835_3 861299.J421_0365 5.655e-100 353.0 COG0531@1|root,COG0531@2|Bacteria 2|Bacteria E amino acid - - - ko:K03294 - - - - ko00000 2.A.3.2 - - AA_permease_2 QTD1_k127_2596835_9 1123261.AXDW01000003_gene1848 7.088e-59 208.0 COG1764@1|root,COG1764@2|Bacteria,1RI5C@1224|Proteobacteria,1S4EM@1236|Gammaproteobacteria,1XC5Q@135614|Xanthomonadales 135614|Xanthomonadales O OsmC-like protein - - - - - - - - - - - - OsmC QTD1_k127_2596835_4 1123368.AUIS01000005_gene368 1.728e-96 332.0 COG0438@1|root,COG0438@2|Bacteria,1MUB7@1224|Proteobacteria,1RQYE@1236|Gammaproteobacteria,2NC4S@225057|Acidithiobacillales 1236|Gammaproteobacteria M glycosyl transferase group 1 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 QTD1_k127_2596835_2 1038867.AXAY01000022_gene2806 3.189e-114 386.0 COG0277@1|root,COG0277@2|Bacteria,1MUPW@1224|Proteobacteria,2TUNK@28211|Alphaproteobacteria,3JSHP@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria C Berberine and berberine like - - - - - - - - - - - - BBE,FAD_binding_4 QTD1_k127_2596835_5 404589.Anae109_0029 5.663e-95 330.0 COG3202@1|root,COG3202@2|Bacteria,1MVP5@1224|Proteobacteria,42MNS@68525|delta/epsilon subdivisions,2WSQX@28221|Deltaproteobacteria 28221|Deltaproteobacteria C ATP ADP translocase - - - ko:K03301 - - - - ko00000 2.A.12 - - MFS_1,TLC QTD1_k127_2596835_10 399739.Pmen_2313 1.733e-57 219.0 COG0515@1|root,COG2304@1|root,COG0515@2|Bacteria,COG2304@2|Bacteria,1MXU0@1224|Proteobacteria,1T1GT@1236|Gammaproteobacteria,1YKNP@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria KLT Protein tyrosine kinase ppkA - 2.7.11.1 ko:K11912 ko02025,ko03070,map02025,map03070 - - - ko00000,ko00001,ko01000,ko01001,ko02044 - - - Pkinase QTD1_k127_2596835_15 765913.ThidrDRAFT_3768 9.172e-09 64.0 28P52@1|root,2ZC06@2|Bacteria,1QDPX@1224|Proteobacteria,1S1Z6@1236|Gammaproteobacteria,1WY58@135613|Chromatiales 135613|Chromatiales S Type II secretion system protein B - - - ko:K02451 - M00331 - - ko00000,ko00002,ko02044 9.B.42 - - T2SSB QTD1_k127_2596835_1 671143.DAMO_0658 8.732e-130 433.0 COG3267@1|root,COG3409@1|root,COG3267@2|Bacteria,COG3409@2|Bacteria 2|Bacteria M Peptidoglycan-binding domain 1 protein exeA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 - ko:K02450 - M00331 - - ko00000,ko00002,ko02044 9.B.42 - - AAA_22,PG_binding_1 QTD1_k127_2596835_6 469371.Tbis_1393 5.109e-87 301.0 COG0389@1|root,COG0389@2|Bacteria,2GKBI@201174|Actinobacteria,4DXRB@85010|Pseudonocardiales 201174|Actinobacteria L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII dinB - 2.7.7.7 ko:K02346 - - - - ko00000,ko01000,ko03400 - - - HHH_5,IMS,IMS_C,IMS_HHH QTD1_k127_2596835_11 236097.ADG881_171 6.888e-45 168.0 2CD0I@1|root,32RWS@2|Bacteria,1N0MC@1224|Proteobacteria,1SABW@1236|Gammaproteobacteria,1XPPR@135619|Oceanospirillales 135619|Oceanospirillales S Domain of unknown function (DUF4399) - - - - - - - - - - - - DUF4399 QTD1_k127_2596835_12 876044.IMCC3088_6 1.222e-43 176.0 COG1566@1|root,COG1566@2|Bacteria,1RJ3I@1224|Proteobacteria,1S7BS@1236|Gammaproteobacteria 1236|Gammaproteobacteria V Protein of unknown function (DUF3667) - - - - - - - - - - - - DUF3667 QTD1_k127_2596835_0 1129374.AJE_15649 7.685e-281 891.0 COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,1RPM5@1236|Gammaproteobacteria,4657E@72275|Alteromonadaceae 1236|Gammaproteobacteria I COG1960 Acyl-CoA dehydrogenases fadE GO:0003674,GO:0003824,GO:0003995,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016020,GO:0016042,GO:0016054,GO:0016491,GO:0016627,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044464,GO:0046395,GO:0055114,GO:0071704,GO:0071944,GO:0072329,GO:1901575 - ko:K06445 ko00071,ko01100,ko01212,map00071,map01100,map01212 M00087 R01175,R01279,R03777,R03857,R03990,R04751,R04754 RC00052,RC00076 ko00000,ko00001,ko00002,ko01000 - - iSbBS512_1146.SbBS512_E0217 Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N,DUF1974 QTD1_k127_2596835_14 1469245.JFBG01000080_gene277 1.426e-28 125.0 COG0039@1|root,COG0039@2|Bacteria,1MV57@1224|Proteobacteria,1RMAX@1236|Gammaproteobacteria 1236|Gammaproteobacteria C Catalyzes the reversible oxidation of malate to oxaloacetate mdh GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006107,GO:0006108,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019362,GO:0019637,GO:0019674,GO:0019752,GO:0030060,GO:0034641,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046483,GO:0046496,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0072350,GO:0072524,GO:1901360,GO:1901564 1.1.1.37 ko:K00024 ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00012,M00168,M00173,M00346,M00374,M00620,M00740 R00342,R07136 RC00031 ko00000,ko00001,ko00002,ko01000 - - - Ldh_1_C,Ldh_1_N QTD1_k127_2596835_7 396588.Tgr7_1461 7.272e-70 245.0 COG1186@1|root,COG1186@2|Bacteria,1MUAW@1224|Proteobacteria,1RP9Z@1236|Gammaproteobacteria,1WWPU@135613|Chromatiales 135613|Chromatiales J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA prfB - - ko:K02836 - - - - ko00000,ko03012 - - - PCRF,RF-1 QTD1_k127_2617386_23 1122604.JONR01000008_gene2249 4.551e-30 120.0 2E69Z@1|root,330XW@2|Bacteria,1NC2S@1224|Proteobacteria,1SDZ1@1236|Gammaproteobacteria,1X7Z3@135614|Xanthomonadales 135614|Xanthomonadales P Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria - - - - - - - - - - - - HIPIP,TAT_signal QTD1_k127_2617386_7 869210.Marky_0572 3.549e-127 417.0 COG0626@1|root,COG0626@2|Bacteria,1WK1T@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus E PFAM Cys Met metabolism PLP-dependent enzyme - - 2.5.1.48 ko:K01739 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 M00017 R00999,R01288,R02508,R03217,R03260,R04944,R04945,R04946 RC00020,RC00056,RC00069,RC00420,RC02848,RC02866 ko00000,ko00001,ko00002,ko01000 - - - Cys_Met_Meta_PP QTD1_k127_2617386_29 105420.BBPO01000015_gene5085 2.556e-06 55.0 COG0745@1|root,COG0745@2|Bacteria,2GNFH@201174|Actinobacteria,2NFNS@228398|Streptacidiphilus 201174|Actinobacteria T Transcriptional regulatory protein, C terminal prrA GO:0000287,GO:0003674,GO:0005488,GO:0005509,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0043167,GO:0043169,GO:0044110,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0051704,GO:0071944 - ko:K07671 ko02020,map02020 M00462 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C QTD1_k127_2617386_2 1283300.ATXB01000001_gene42 3.084e-244 765.0 COG0058@1|root,COG0058@2|Bacteria,1MW4J@1224|Proteobacteria,1RQMD@1236|Gammaproteobacteria,1XGZF@135618|Methylococcales 135618|Methylococcales G Carbohydrate phosphorylase - - - - - - - - - - - - Phosphorylase QTD1_k127_2617386_25 261292.Nit79A3_2913 1.3e-26 115.0 COG0517@1|root,COG0517@2|Bacteria,1QTXQ@1224|Proteobacteria,2VWDB@28216|Betaproteobacteria,3734T@32003|Nitrosomonadales 28216|Betaproteobacteria S Domain in cystathionine beta-synthase and other proteins. - - - - - - - - - - - - CBS QTD1_k127_2617386_10 1123261.AXDW01000005_gene2667 8.374e-105 346.0 COG1682@1|root,COG1682@2|Bacteria,1QXTH@1224|Proteobacteria,1SPS5@1236|Gammaproteobacteria 1236|Gammaproteobacteria GM ABC-2 type transporter - - - - - - - - - - - - ABC2_membrane QTD1_k127_2617386_11 404589.Anae109_1617 1.164e-102 345.0 COG1131@1|root,COG1131@2|Bacteria,1MUX3@1224|Proteobacteria,42ZGK@68525|delta/epsilon subdivisions,2WUTG@28221|Deltaproteobacteria 28221|Deltaproteobacteria V ABC transporter - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran QTD1_k127_2617386_28 1280952.HJA_05537 2.217e-06 57.0 COG4890@1|root,COG4890@2|Bacteria 2|Bacteria S oxidoreductase activity, acting on diphenols and related substances as donors ybgT GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008152,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0019867,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0071944 1.10.3.14 ko:K00424 ko00190,ko02020,map00190,map02020 M00153 - - ko00000,ko00001,ko01000 3.D.4.3 - - YbgT_YccB QTD1_k127_2617386_9 1122214.AQWH01000011_gene2083 1.386e-110 369.0 COG1294@1|root,COG1294@2|Bacteria,1MURP@1224|Proteobacteria,2TU3I@28211|Alphaproteobacteria,2PKQ8@255475|Aurantimonadaceae 28211|Alphaproteobacteria C Cytochrome bd terminal oxidase subunit II cydB - 1.10.3.14 ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00153 R11325 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.4.3 - - Cyt_bd_oxida_II QTD1_k127_2617386_3 1122604.JONR01000057_gene3543 1.213e-237 744.0 COG1271@1|root,COG1271@2|Bacteria,1MV60@1224|Proteobacteria,1RN2U@1236|Gammaproteobacteria,1X4FJ@135614|Xanthomonadales 135614|Xanthomonadales C oxidase, subunit cydA - 1.10.3.14 ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00153 R11325 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.4.3 - - Cyt_bd_oxida_I QTD1_k127_2617386_19 670307.HYPDE_23308 4.025e-54 197.0 COG0778@1|root,COG0778@2|Bacteria,1RDJ6@1224|Proteobacteria,2U44Q@28211|Alphaproteobacteria 28211|Alphaproteobacteria C Nitroreductase family - - - - - - - - - - - - Nitroreductase QTD1_k127_2617386_26 631362.Thi970DRAFT_00093 2.405e-17 90.0 COG2863@1|root,COG2863@2|Bacteria,1R6DK@1224|Proteobacteria,1S0NK@1236|Gammaproteobacteria,1WWZZ@135613|Chromatiales 135613|Chromatiales C PFAM Cytochrome C - - - - - - - - - - - - Cytochrom_C QTD1_k127_2617386_1 338969.Rfer_0863 1.032e-266 841.0 COG1529@1|root,COG1529@2|Bacteria,1QTTJ@1224|Proteobacteria,2VHII@28216|Betaproteobacteria,4AJXE@80864|Comamonadaceae 28216|Betaproteobacteria C PFAM aldehyde oxidase and xanthine dehydrogenase molybdopterin binding - - 1.3.99.16 ko:K00256 - - - - ko00000,ko01000 - - - Ald_Xan_dh_C,Ald_Xan_dh_C2 QTD1_k127_2617386_17 338969.Rfer_0864 1.514e-56 201.0 COG2080@1|root,COG2080@2|Bacteria,1RD8C@1224|Proteobacteria,2VRBT@28216|Betaproteobacteria,4AE1V@80864|Comamonadaceae 28216|Betaproteobacteria C 2Fe-2S -binding domain protein iorA - 1.17.2.1 ko:K18029 ko00760,ko01120,map00760,map01120 M00622 R09473 RC00589 ko00000,ko00001,ko00002,ko01000 - - - Fer2,Fer2_2 QTD1_k127_2617386_14 1123269.NX02_02315 8.506e-93 310.0 COG1028@1|root,COG1028@2|Bacteria,1MUEV@1224|Proteobacteria,2TRCF@28211|Alphaproteobacteria,2K8WK@204457|Sphingomonadales 204457|Sphingomonadales IQ KR domain - - 1.1.1.36 ko:K00023 ko00630,ko00650,ko01120,ko01200,map00630,map00650,map01120,map01200 M00373 R01779,R01977 RC00103,RC00117 ko00000,ko00001,ko00002,ko01000 - - - adh_short_C2 QTD1_k127_2617386_18 1123261.AXDW01000003_gene1957 2.074e-56 208.0 COG3829@1|root,COG4191@1|root,COG3829@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,1RR5W@1236|Gammaproteobacteria,1X7AW@135614|Xanthomonadales 135614|Xanthomonadales T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HisKA,PAS,PAS_8 QTD1_k127_2617386_16 1027273.GZ77_15620 9.067e-69 239.0 COG4566@1|root,COG4566@2|Bacteria,1N6WR@1224|Proteobacteria,1S0TV@1236|Gammaproteobacteria,1XJ7K@135619|Oceanospirillales 135619|Oceanospirillales T helix_turn_helix, Lux Regulon - - - - - - - - - - - - GerE,Response_reg QTD1_k127_2617386_15 1121033.AUCF01000004_gene4784 1.479e-81 291.0 COG0642@1|root,COG0784@1|root,COG3300@1|root,COG0784@2|Bacteria,COG2205@2|Bacteria,COG3300@2|Bacteria,1NRP8@1224|Proteobacteria,2U0Y1@28211|Alphaproteobacteria,2JZ21@204441|Rhodospirillales 28211|Alphaproteobacteria T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HisKA,Hpt,MHYT,PAS,Response_reg QTD1_k127_2617386_24 1323663.AROI01000041_gene1257 4.789e-27 123.0 COG0589@1|root,COG0589@2|Bacteria,1MVZS@1224|Proteobacteria,1RPAE@1236|Gammaproteobacteria 1236|Gammaproteobacteria T universal stress protein ydaA - - ko:K14055 - - - - ko00000 - - - Usp QTD1_k127_2617386_13 243233.MCA1003 2.393e-102 359.0 COG2989@1|root,COG2989@2|Bacteria,1MV14@1224|Proteobacteria,1RQR7@1236|Gammaproteobacteria,1XED4@135618|Methylococcales 135618|Methylococcales S Putative peptidoglycan binding domain - - - ko:K21470 - - - - ko00000,ko01002,ko01011 - - - PG_binding_1,YkuD QTD1_k127_2617386_20 1150626.PHAMO_340131 2.512e-51 189.0 COG3108@1|root,COG3108@2|Bacteria,1MWW2@1224|Proteobacteria,2TQZ1@28211|Alphaproteobacteria,2JTBK@204441|Rhodospirillales 204441|Rhodospirillales S Bacterial protein of unknown function (DUF882) - - - - - - - - - - - - Peptidase_M15_2 QTD1_k127_2617386_8 1040989.AWZU01000018_gene2822 9.767e-127 414.0 COG0280@1|root,COG0280@2|Bacteria,1QTXP@1224|Proteobacteria,2TQYT@28211|Alphaproteobacteria,3JTVX@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria C Phosphate acetyl/butaryl transferase pta - 2.3.1.19,2.3.1.8 ko:K00625,ko:K00634 ko00430,ko00620,ko00640,ko00650,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00650,map00680,map00720,map01100,map01120,map01200 M00357,M00579 R00230,R00921,R01174 RC00004,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000 - - - PTA_PTB QTD1_k127_2617386_12 637389.Acaty_c1089 1.325e-102 347.0 COG0508@1|root,COG0508@2|Bacteria,1MU7K@1224|Proteobacteria,1RNPT@1236|Gammaproteobacteria,2NCTH@225057|Acidithiobacillales 225057|Acidithiobacillales C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex - - 2.3.1.12 ko:K00627 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200 M00307 R00209,R02569 RC00004,RC02742,RC02857 br01601,ko00000,ko00001,ko00002,ko01000 - - - 2-oxoacid_dh,Biotin_lipoyl,E3_binding QTD1_k127_2617386_4 743299.Acife_0800 1.879e-153 490.0 COG0022@1|root,COG0022@2|Bacteria,1R8KB@1224|Proteobacteria,1RP3G@1236|Gammaproteobacteria,2NC93@225057|Acidithiobacillales 225057|Acidithiobacillales C Transketolase, C-terminal domain - - 1.2.4.1 ko:K00162 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00307 R00014,R00209,R01699,R03270 RC00004,RC00027,RC00627,RC02742,RC02744,RC02882 br01601,ko00000,ko00001,ko00002,ko01000 - - - Transket_pyr,Transketolase_C QTD1_k127_2617386_5 637390.AFOH01000047_gene2008 1.028e-146 474.0 COG1071@1|root,COG1071@2|Bacteria,1MU5R@1224|Proteobacteria,1RWHU@1236|Gammaproteobacteria,2NCQT@225057|Acidithiobacillales 225057|Acidithiobacillales C Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - 1.2.4.1 ko:K00161 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00307 R00014,R00209,R01699,R03270 RC00004,RC00027,RC00627,RC02742,RC02744,RC02882 br01601,ko00000,ko00001,ko00002,ko01000 - - - E1_dh QTD1_k127_2617386_22 883078.HMPREF9695_05023 3.818e-36 143.0 COG2823@1|root,COG2823@2|Bacteria,1RA8T@1224|Proteobacteria,2U6QG@28211|Alphaproteobacteria,3JYKK@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria S BON domain - - - ko:K04065 - - - - ko00000 - - - BON QTD1_k127_2617386_21 351348.Maqu_0052 2.308e-37 146.0 COG0071@1|root,COG0071@2|Bacteria,1N7C7@1224|Proteobacteria,1S607@1236|Gammaproteobacteria,468FQ@72275|Alteromonadaceae 1236|Gammaproteobacteria O Belongs to the small heat shock protein (HSP20) family hspA - - ko:K13993 ko04141,map04141 - - - ko00000,ko00001,ko03110 - - - HSP20 QTD1_k127_2617386_6 1000565.METUNv1_02553 6.349e-140 459.0 COG0635@1|root,COG0635@2|Bacteria,1MV1I@1224|Proteobacteria,2VJ1F@28216|Betaproteobacteria,2KVK4@206389|Rhodocyclales 206389|Rhodocyclales H Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - - - - - - - - - - HemN_C,Radical_SAM QTD1_k127_2617386_0 1123368.AUIS01000008_gene2246 9.006e-292 922.0 COG0045@1|root,COG1042@1|root,COG1247@1|root,COG0045@2|Bacteria,COG1042@2|Bacteria,COG1247@2|Bacteria,1MW98@1224|Proteobacteria,1RPXX@1236|Gammaproteobacteria 1236|Gammaproteobacteria C Acyl-CoA synthetase (NDP forming) yfiQ GO:0003674,GO:0003824,GO:0006464,GO:0006473,GO:0006475,GO:0006807,GO:0006950,GO:0006979,GO:0008080,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019538,GO:0022607,GO:0032459,GO:0032462,GO:0034212,GO:0036211,GO:0043170,GO:0043254,GO:0043412,GO:0043543,GO:0043933,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0052858,GO:0061733,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:1901564 - ko:K09181 - - - - ko00000 - - - ATP-grasp_5,Acetyltransf_1,Acetyltransf_3,CoA_binding_2,Succ_CoA_lig QTD1_k127_2617386_27 1031711.RSPO_c01019 7.651e-12 68.0 28JQB@1|root,2Z9G8@2|Bacteria,1QCH9@1224|Proteobacteria,2VJJF@28216|Betaproteobacteria,1K17Y@119060|Burkholderiaceae 28216|Betaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_2627523_4 264198.Reut_A0480 5.577e-17 83.0 COG1738@1|root,COG1738@2|Bacteria,1NIPE@1224|Proteobacteria,2VH6D@28216|Betaproteobacteria,1K4P9@119060|Burkholderiaceae 28216|Betaproteobacteria U Involved in the import of queuosine (Q) precursors, required for Q precursor salvage - - - ko:K09125 - - - - ko00000 - - - Vut_1 QTD1_k127_2627523_1 1123256.KB907926_gene781 7.858e-183 581.0 COG0179@1|root,COG0179@2|Bacteria,1MW82@1224|Proteobacteria,1RQYW@1236|Gammaproteobacteria 1236|Gammaproteobacteria Q COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) fahA - 3.7.1.2 ko:K01555 ko00350,ko00643,ko01100,ko01120,map00350,map00643,map01100,map01120 M00044 R01364 RC00326,RC00446 ko00000,ko00001,ko00002,ko01000,ko04147 - - iJN746.PP_4620 FAA_hydrolase,FAA_hydrolase_N QTD1_k127_2627523_0 1144342.PMI40_00228 3.64e-216 682.0 COG3508@1|root,COG3508@2|Bacteria,1MV9G@1224|Proteobacteria,2VJUH@28216|Betaproteobacteria,4728F@75682|Oxalobacteraceae 28216|Betaproteobacteria Q Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate hmgA - 1.13.11.5 ko:K00451 ko00350,ko00643,ko01100,ko01120,map00350,map00643,map01100,map01120 M00044 R02519 RC00737 ko00000,ko00001,ko00002,ko01000 - - - HgmA QTD1_k127_2627523_2 1382359.JIAL01000001_gene644 6.519e-163 530.0 COG0624@1|root,COG0624@2|Bacteria,3Y4G2@57723|Acidobacteria,2JJG2@204432|Acidobacteriia 204432|Acidobacteriia E Peptidase dimerisation domain - - - - - - - - - - - - M20_dimer,Peptidase_M20 QTD1_k127_2627523_3 1122604.JONR01000025_gene4597 3.264e-25 107.0 COG3391@1|root,COG3391@2|Bacteria,1RFSR@1224|Proteobacteria,1SZDH@1236|Gammaproteobacteria,1XCUC@135614|Xanthomonadales 135614|Xanthomonadales S amine dehydrogenase activity - - - - - - - - - - - - - QTD1_k127_2684215_2 935567.JAES01000012_gene933 1.721e-79 275.0 COG0122@1|root,COG2169@1|root,COG0122@2|Bacteria,COG2169@2|Bacteria,1QTXM@1224|Proteobacteria,1RNQB@1236|Gammaproteobacteria,1X4AJ@135614|Xanthomonadales 135614|Xanthomonadales K AlkA N-terminal domain Ada - 3.2.2.21 ko:K13529 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03000,ko03400 - - - Ada_Zn_binding,AlkA_N,HTH_18,HhH-GPD QTD1_k127_2684215_3 502025.Hoch_5558 4.72e-50 183.0 COG0350@1|root,COG0350@2|Bacteria,1N2YQ@1224|Proteobacteria,42TN9@68525|delta/epsilon subdivisions,2WRG0@28221|Deltaproteobacteria,2YVGJ@29|Myxococcales 28221|Deltaproteobacteria J Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated ogt - 2.1.1.63 ko:K00567,ko:K10778 - - - - ko00000,ko01000,ko03000,ko03400 - - - Ada_Zn_binding,DNA_binding_1,HTH_18,Methyltransf_1N QTD1_k127_2684215_4 926566.Terro_0703 3.994e-29 125.0 COG0251@1|root,COG0251@2|Bacteria 2|Bacteria J oxidation-reduction process - - 3.5.99.10 ko:K09022 - - R11098,R11099 RC03275,RC03354 ko00000,ko01000 - - - Ribonuc_L-PSP QTD1_k127_2684215_1 1122604.JONR01000003_gene1530 9.061e-100 339.0 COG2355@1|root,COG2355@2|Bacteria,1MWEW@1224|Proteobacteria,1RPBD@1236|Gammaproteobacteria 1236|Gammaproteobacteria E peptidase M19 HA62_24395 - 3.4.13.19 ko:K01273 - - - - ko00000,ko00537,ko01000,ko01002,ko04147 - - - Peptidase_M19 QTD1_k127_2684215_0 204669.Acid345_3948 2.304e-116 387.0 COG3391@1|root,COG3391@2|Bacteria,3Y6WG@57723|Acidobacteria,2JKVV@204432|Acidobacteriia 204432|Acidobacteriia S amine dehydrogenase activity - - - - - - - - - - - - - QTD1_k127_2684215_5 1121123.AUAO01000003_gene2038 6.89e-28 121.0 COG1595@1|root,COG1595@2|Bacteria,1RD9G@1224|Proteobacteria,2U92K@28211|Alphaproteobacteria,2KGJR@204458|Caulobacterales 204458|Caulobacterales K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4,Sigma70_r4_2 QTD1_k127_2690258_1 234267.Acid_3814 5.17e-69 245.0 COG0457@1|root,COG0515@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,3Y2YM@57723|Acidobacteria 57723|Acidobacteria K chaperone-mediated protein folding - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - TPR_8 QTD1_k127_2690258_2 765420.OSCT_2074 3.334e-38 149.0 COG0476@1|root,COG0607@1|root,COG0476@2|Bacteria,COG0607@2|Bacteria,2G5TN@200795|Chloroflexi,376KE@32061|Chloroflexia 32061|Chloroflexia HP PFAM UBA THIF-type NAD FAD binding protein - - 2.7.7.80,2.8.1.11 ko:K21029,ko:K21147 ko04122,map04122 - R07459,R07461 RC00043 ko00000,ko00001,ko01000 - - - Rhodanese,ThiF QTD1_k127_2690258_3 713586.KB900536_gene2398 1.093e-20 103.0 COG1977@1|root,COG1977@2|Bacteria,1N9QE@1224|Proteobacteria 1224|Proteobacteria H ThiS family - - - ko:K03636 ko04122,map04122 - - - ko00000,ko00001 - - - ThiS QTD1_k127_2690258_0 264198.Reut_B4987 1.536e-167 550.0 COG4447@1|root,COG4447@2|Bacteria,1ND1J@1224|Proteobacteria,2VMA5@28216|Betaproteobacteria,1K2TY@119060|Burkholderiaceae 28216|Betaproteobacteria S protein related to plant photosystem II stability assembly factor - - - - - - - - - - - - - QTD1_k127_2690258_5 65497.JODV01000008_gene132 4.35e-11 76.0 COG4805@1|root,COG4805@2|Bacteria,2GMUR@201174|Actinobacteria,4E0HP@85010|Pseudonocardiales 201174|Actinobacteria S Bacterial protein of unknown function (DUF885) - - - - - - - - - - - - DUF885 QTD1_k127_2702836_17 395494.Galf_0422 8.906e-72 249.0 COG0457@1|root,COG0457@2|Bacteria,1MVMG@1224|Proteobacteria,2VP95@28216|Betaproteobacteria 28216|Betaproteobacteria S repeat-containing protein - - - - - - - - - - - - Sulfotransfer_3,TPR_1,TPR_10,TPR_16,TPR_2,TPR_6,TPR_8 QTD1_k127_2702836_3 1336208.JADY01000018_gene3249 4.892e-228 720.0 COG0554@1|root,COG0554@2|Bacteria,1MUP7@1224|Proteobacteria,2TRD7@28211|Alphaproteobacteria,2JR59@204441|Rhodospirillales 204441|Rhodospirillales F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate glpK GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 - R00847 RC00002,RC00017 ko00000,ko00001,ko01000,ko04147 - - - FGGY_C,FGGY_N QTD1_k127_2702836_7 698761.RTCIAT899_CH16705 2.154e-182 604.0 COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,4B7AV@82115|Rhizobiaceae 28211|Alphaproteobacteria C belongs to the aldehyde dehydrogenase family - - 1.2.1.99 ko:K09472 ko00330,ko01100,map00330,map01100 M00136 R07417,R07418 RC00080 ko00000,ko00001,ko00002,ko01000 - - - Aldedh QTD1_k127_2702836_5 1122612.AUBA01000025_gene3119 9.047e-204 639.0 COG4948@1|root,COG4948@2|Bacteria,1MURK@1224|Proteobacteria,2TRS9@28211|Alphaproteobacteria,2KCTY@204457|Sphingomonadales 204457|Sphingomonadales M mandelate racemase muconate lactonizing - - 4.2.1.6,4.2.1.8,5.1.2.2 ko:K01684,ko:K01781,ko:K08323 ko00040,ko00052,ko00627,ko01100,ko01120,map00040,map00052,map00627,map01100,map01120 M00061,M00552 R03033,R03791,R04161,R05606 RC00543,RC00998 ko00000,ko00001,ko00002,ko01000 - - - MR_MLE_C,MR_MLE_N QTD1_k127_2702836_2 1504672.669786107 7.561e-234 734.0 COG2303@1|root,COG2303@2|Bacteria,1MV19@1224|Proteobacteria,2VI6F@28216|Betaproteobacteria,4A9MZ@80864|Comamonadaceae 28216|Betaproteobacteria C Belongs to the GMC oxidoreductase family - - 1.1.99.1 ko:K00108 ko00260,ko01100,map00260,map01100 M00555 R01025 RC00087 ko00000,ko00001,ko00002,ko01000 - - - GMC_oxred_C,GMC_oxred_N QTD1_k127_2702836_10 983920.Y88_0496 2.611e-135 444.0 COG0477@1|root,COG2814@2|Bacteria,1NU31@1224|Proteobacteria,2U5M0@28211|Alphaproteobacteria,2KEAE@204457|Sphingomonadales 204457|Sphingomonadales EGP of the major facilitator superfamily - - - - - - - - - - - - MFS_1 QTD1_k127_2702836_13 1267533.KB906733_gene3591 1.437e-83 292.0 COG2271@1|root,COG2271@2|Bacteria,3Y3W5@57723|Acidobacteria,2JK7R@204432|Acidobacteriia 204432|Acidobacteriia G Major Facilitator Superfamily - - - - - - - - - - - - MFS_1 QTD1_k127_2702836_28 886293.Sinac_4913 2.092e-49 203.0 COG4564@1|root,COG4564@2|Bacteria 2|Bacteria T Single Cache domain 2 degS - 2.7.13.3 ko:K02480 - - - - ko00000,ko01000,ko01001,ko02022 - - - HATPase_c,HisKA_3,sCache_2 QTD1_k127_2702836_19 1054213.HMPREF9946_03239 2.336e-64 228.0 COG2197@1|root,COG2197@2|Bacteria,1R9GN@1224|Proteobacteria,2VETM@28211|Alphaproteobacteria,2JYMX@204441|Rhodospirillales 204441|Rhodospirillales K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - - - - - - - - - - GerE,Response_reg QTD1_k127_2702836_8 1095769.CAHF01000015_gene2790 2.289e-142 479.0 COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2VH3V@28216|Betaproteobacteria,473EX@75682|Oxalobacteraceae 28216|Betaproteobacteria T TIGRFAM diguanylate cyclase (GGDEF) domain - - 2.7.7.65 ko:K21023 ko02025,map02025 - - - ko00000,ko00001,ko01000 - - - EAL,GGDEF,MHYT QTD1_k127_2702836_25 639030.JHVA01000001_gene398 6.768e-58 219.0 COG1409@1|root,COG1409@2|Bacteria,3Y5PM@57723|Acidobacteria,2JN3H@204432|Acidobacteriia 204432|Acidobacteriia S Calcineurin-like phosphoesterase - - - - - - - - - - - - Metallophos QTD1_k127_2702836_32 768671.ThimaDRAFT_4079 1.425e-33 140.0 COG2863@1|root,COG2863@2|Bacteria,1RCAT@1224|Proteobacteria,1T09H@1236|Gammaproteobacteria,1X2M4@135613|Chromatiales 135613|Chromatiales C Cytochrome C oxidase, cbb3-type, subunit III - - - - - - - - - - - - - QTD1_k127_2702836_18 395495.Lcho_1402 1.899e-68 250.0 COG2197@1|root,COG2197@2|Bacteria,1MWGM@1224|Proteobacteria,2VJ9Y@28216|Betaproteobacteria,1KM60@119065|unclassified Burkholderiales 28216|Betaproteobacteria K Two component transcriptional regulator, LuxR family - - - - - - - - - - - - GerE,Response_reg QTD1_k127_2702836_24 56780.SYN_01954 1.509e-59 216.0 COG4585@1|root,COG4585@2|Bacteria,1MWPN@1224|Proteobacteria,42RUN@68525|delta/epsilon subdivisions,2WNJZ@28221|Deltaproteobacteria,2MR4S@213462|Syntrophobacterales 28221|Deltaproteobacteria T Histidine kinase - - - - - - - - - - - - CHASE4,HAMP,HATPase_c,HisKA_3,PAS_3,PAS_4,PAS_9 QTD1_k127_2702836_15 391600.ABRU01000024_gene772 3.863e-80 279.0 COG1940@1|root,COG1940@2|Bacteria,1R7YN@1224|Proteobacteria,2TUWX@28211|Alphaproteobacteria,2KG6G@204458|Caulobacterales 204458|Caulobacterales GK PFAM ROK family protein - - 2.7.1.4 ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 - R00760,R00867,R03920 RC00002,RC00017 ko00000,ko00001,ko01000 - - - ROK QTD1_k127_2702836_31 1206744.BAGL01000002_gene4263 1.3e-34 153.0 COG1309@1|root,COG1309@2|Bacteria,2GJQ1@201174|Actinobacteria,4G8S9@85025|Nocardiaceae 201174|Actinobacteria K Bacterial transcriptional repressor C-terminal - - - - - - - - - - - - TetR_C_11,TetR_N QTD1_k127_2702836_4 1366050.N234_03450 2.294e-227 722.0 COG0038@1|root,COG0517@1|root,COG0038@2|Bacteria,COG0517@2|Bacteria,1MV4K@1224|Proteobacteria,2VK3I@28216|Betaproteobacteria,1K148@119060|Burkholderiaceae 28216|Betaproteobacteria P CBS domain containing protein clcA_1 - - - - - - - - - - - CBS,Voltage_CLC QTD1_k127_2702836_0 1095769.CAHF01000011_gene2633 5.756e-251 784.0 COG2807@1|root,COG2807@2|Bacteria,1QU0F@1224|Proteobacteria,2WH2Q@28216|Betaproteobacteria 28216|Betaproteobacteria P Major facilitator Superfamily - - - - - - - - - - - - MFS_1 QTD1_k127_2702836_33 1379270.AUXF01000001_gene2500 1.131e-27 123.0 COG1765@1|root,COG1765@2|Bacteria,1ZTV1@142182|Gemmatimonadetes 142182|Gemmatimonadetes O OsmC-like protein - - - ko:K07397 - - - - ko00000 - - - OsmC QTD1_k127_2702836_11 1123248.KB893327_gene788 1.214e-113 373.0 COG0258@1|root,COG0258@2|Bacteria 2|Bacteria L nuclease activity polA GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 - R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko01000,ko03032,ko03400 - - - 5_3_exonuc,5_3_exonuc_N,DNA_pol_A,DNA_pol_A_exo1 QTD1_k127_2702836_22 713586.KB900536_gene38 2.285e-61 220.0 COG2930@1|root,COG2930@2|Bacteria,1RCYH@1224|Proteobacteria,1S41U@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Las17-binding protein actin regulator CT2216 - - - - - - - - - - - Ysc84 QTD1_k127_2702836_16 1031711.RSPO_c03113 4.514e-75 260.0 COG2197@1|root,COG2197@2|Bacteria,1MWGM@1224|Proteobacteria,2VHQ0@28216|Betaproteobacteria,1K11T@119060|Burkholderiaceae 28216|Betaproteobacteria K response regulator vsrD - - - - - - - - - - - GerE,Response_reg QTD1_k127_2702836_36 582744.Msip34_1121 2.408e-14 79.0 COG2197@1|root,COG2197@2|Bacteria,1NDQC@1224|Proteobacteria,2VVNY@28216|Betaproteobacteria,2KN52@206350|Nitrosomonadales 206350|Nitrosomonadales T Response regulator receiver domain - - - - - - - - - - - - Response_reg QTD1_k127_2702836_26 859657.RPSI07_3124 1.207e-53 207.0 COG4585@1|root,COG5278@1|root,COG4585@2|Bacteria,COG5278@2|Bacteria,1MWPN@1224|Proteobacteria,2VJR2@28216|Betaproteobacteria,1K4ZR@119060|Burkholderiaceae 28216|Betaproteobacteria T Histidine kinase vsrA - 2.7.13.1 ko:K05962 - - - - ko00000,ko01000 - - - CHASE3,HATPase_c,HisKA_3 QTD1_k127_2702836_37 56107.Cylst_1637 4.411e-08 63.0 COG2199@1|root,COG2203@1|root,COG2199@2|Bacteria,COG2203@2|Bacteria,1GITF@1117|Cyanobacteria,1HR1J@1161|Nostocales 1117|Cyanobacteria T diguanylate cyclase - - - - - - - - - - - - GAF_2,GGDEF QTD1_k127_2702836_23 113395.AXAI01000005_gene4092 2.074e-60 219.0 COG4089@1|root,COG4089@2|Bacteria,1MV8K@1224|Proteobacteria,2U3GA@28211|Alphaproteobacteria,3JT2V@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria S Protein of unknown function (DUF1614) - - - - - - - - - - - - DUF1614 QTD1_k127_2702836_34 1121938.AUDY01000008_gene1122 8.5e-27 121.0 COG0596@1|root,COG0596@2|Bacteria,1UWU4@1239|Firmicutes,4IDYG@91061|Bacilli,3NG4E@45667|Halobacillus 91061|Bacilli S Alpha/beta hydrolase family - - - - - - - - - - - - Abhydrolase_1 QTD1_k127_2702836_20 859657.RPSI07_3191 2.922e-62 218.0 COG4101@1|root,COG4101@2|Bacteria,1RB8W@1224|Proteobacteria,2VPF8@28216|Betaproteobacteria,1K4JK@119060|Burkholderiaceae 28216|Betaproteobacteria G Cupin 2, conserved barrel domain protein - - - - - - - - - - - - Cupin_2 QTD1_k127_2702836_14 1267534.KB906754_gene3046 1.089e-82 286.0 COG3967@1|root,COG3967@2|Bacteria,3Y4W4@57723|Acidobacteria,2JJKJ@204432|Acidobacteriia 204432|Acidobacteriia M short-chain dehydrogenase - - - ko:K14189 - - - - ko00000,ko01000 - - - adh_short QTD1_k127_2702836_9 59538.XP_005977875.1 9.256e-140 458.0 COG0477@1|root,KOG1330@2759|Eukaryota,38BMQ@33154|Opisthokonta,3BBSQ@33208|Metazoa,3CTWB@33213|Bilateria,481KF@7711|Chordata,491DB@7742|Vertebrata,3JCAF@40674|Mammalia,4IVX0@91561|Cetartiodactyla 33208|Metazoa G Spinster homolog 1 - GO:0000003,GO:0000323,GO:0002165,GO:0003006,GO:0003376,GO:0003674,GO:0005215,GO:0005319,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0006810,GO:0006869,GO:0006897,GO:0006915,GO:0006928,GO:0006950,GO:0006996,GO:0007033,GO:0007034,GO:0007040,GO:0007041,GO:0007154,GO:0007165,GO:0007186,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007399,GO:0007416,GO:0007417,GO:0007422,GO:0007528,GO:0007610,GO:0007617,GO:0007618,GO:0007619,GO:0008150,GO:0008219,GO:0008333,GO:0008347,GO:0008582,GO:0009267,GO:0009605,GO:0009653,GO:0009791,GO:0009886,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010001,GO:0010008,GO:0010623,GO:0010646,GO:0010648,GO:0010876,GO:0010941,GO:0012501,GO:0012505,GO:0016020,GO:0016043,GO:0016192,GO:0016477,GO:0019098,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023057,GO:0030154,GO:0031090,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031982,GO:0032501,GO:0032502,GO:0032504,GO:0033036,GO:0033554,GO:0035193,GO:0036465,GO:0040007,GO:0040008,GO:0040011,GO:0042063,GO:0042594,GO:0042981,GO:0043067,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043900,GO:0044085,GO:0044087,GO:0044422,GO:0044424,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045476,GO:0045477,GO:0045595,GO:0045924,GO:0046624,GO:0046907,GO:0048468,GO:0048477,GO:0048488,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048589,GO:0048609,GO:0048638,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050808,GO:0050896,GO:0051124,GO:0051128,GO:0051179,GO:0051234,GO:0051239,GO:0051641,GO:0051649,GO:0051674,GO:0051704,GO:0051716,GO:0051960,GO:0051963,GO:0060180,GO:0060284,GO:0065007,GO:0065008,GO:0071496,GO:0071702,GO:0071840,GO:0080171,GO:0090092,GO:0090097,GO:0090099,GO:0090101,GO:0090520,GO:0097708,GO:0098588,GO:0098657,GO:0098805,GO:0098852,GO:0099003,GO:0099504,GO:1902742,GO:1904396,GO:1904748,GO:1905879,GO:2000026,GO:2000241 - ko:K12890 ko03040,ko04657,ko05168,map03040,map04657,map05168 - - - ko00000,ko00001,ko03041 - - - MFS_1 QTD1_k127_2702836_1 670307.HYPDE_23533 2.753e-245 764.0 COG2132@1|root,COG2132@2|Bacteria,1MU0J@1224|Proteobacteria,2TQXH@28211|Alphaproteobacteria 28211|Alphaproteobacteria Q Multi-copper - - - - - - - - - - - - Cu-oxidase,Cu-oxidase_2,Cu-oxidase_3 QTD1_k127_2702836_35 404589.Anae109_3089 1.75e-24 118.0 COG0457@1|root,COG0457@2|Bacteria 404589.Anae109_3089|- S peptidyl-tyrosine sulfation - - - - - - - - - - - - - QTD1_k127_2702836_27 404589.Anae109_3090 1.584e-50 188.0 COG3221@1|root,COG3221@2|Bacteria,1NUZF@1224|Proteobacteria,42ZPG@68525|delta/epsilon subdivisions,2WUT3@28221|Deltaproteobacteria 28221|Deltaproteobacteria P ABC transporter, phosphonate, periplasmic substrate-binding protein - - - - - - - - - - - - Phosphonate-bd QTD1_k127_2702836_6 404589.Anae109_3091 1.921e-195 634.0 COG1033@1|root,COG1033@2|Bacteria,1MUE1@1224|Proteobacteria,42ME2@68525|delta/epsilon subdivisions,2WJRI@28221|Deltaproteobacteria 28221|Deltaproteobacteria T PFAM MMPL family - - - ko:K07003 - - - - ko00000 - - - MMPL QTD1_k127_2702836_12 1335757.SPICUR_08975 5.518e-84 284.0 COG0655@1|root,COG0655@2|Bacteria,1MW7N@1224|Proteobacteria,1S23B@1236|Gammaproteobacteria,1WXV9@135613|Chromatiales 135613|Chromatiales S Belongs to the WrbA family - - 1.6.5.2 ko:K03809 ko00130,ko01110,map00130,map01110 - R02964,R03643,R03816 RC00819 ko00000,ko00001,ko01000 - - - FMN_red QTD1_k127_2702836_30 1479239.JQMU01000001_gene383 1.681e-35 147.0 COG0596@1|root,COG0596@2|Bacteria,1NZXA@1224|Proteobacteria 1224|Proteobacteria S Alpha beta - - - - - - - - - - - - Abhydrolase_1,Abhydrolase_6 QTD1_k127_2702836_21 1125971.ASJB01000009_gene905 1.763e-61 222.0 COG1414@1|root,COG1414@2|Bacteria,2GNHA@201174|Actinobacteria,4DZJ6@85010|Pseudonocardiales 201174|Actinobacteria K TIGRFAM beta-ketoadipate pathway transcriptional regulators, PcaR PcaU PobR family pcaR - - ko:K02624 - - - - ko00000,ko03000 - - - HTH_IclR,IclR QTD1_k127_2702836_29 1218084.BBJK01000005_gene669 3.159e-37 157.0 COG0372@1|root,COG0372@2|Bacteria,1MUII@1224|Proteobacteria,2VQIG@28216|Betaproteobacteria,1K7JG@119060|Burkholderiaceae 28216|Betaproteobacteria C Citrate synthase, C-terminal domain - - 2.3.3.1 ko:K01647 ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00740 R00351 RC00004,RC00067 br01601,ko00000,ko00001,ko00002,ko01000 - - - Citrate_synt QTD1_k127_2708145_2 1121033.AUCF01000022_gene511 1.322e-140 459.0 COG1030@1|root,COG1030@2|Bacteria,1MUJN@1224|Proteobacteria,2U0TP@28211|Alphaproteobacteria,2JQQW@204441|Rhodospirillales 204441|Rhodospirillales O NfeD-like C-terminal, partner-binding - - - - - - - - - - - - NfeD QTD1_k127_2708145_4 765912.Thimo_3321 1.131e-91 308.0 COG0330@1|root,COG0330@2|Bacteria,1MUM8@1224|Proteobacteria,1RNW8@1236|Gammaproteobacteria,1WX9J@135613|Chromatiales 135613|Chromatiales O PFAM Band 7 protein - - - - - - - - - - - - Band_7 QTD1_k127_2708145_1 1121033.AUCF01000005_gene5289 2.833e-269 857.0 COG1643@1|root,COG1643@2|Bacteria,1MUEQ@1224|Proteobacteria,2TRMJ@28211|Alphaproteobacteria,2JPN7@204441|Rhodospirillales 204441|Rhodospirillales L ATP-dependent helicase hrpB - 3.6.4.13 ko:K03579 - - - - ko00000,ko01000 - - - DEAD,HA2,Helicase_C,HrpB_C QTD1_k127_2708145_5 375286.mma_2596 1.472e-79 273.0 COG0288@1|root,COG0288@2|Bacteria,1NGFN@1224|Proteobacteria,2VUIT@28216|Betaproteobacteria,476WJ@75682|Oxalobacteraceae 28216|Betaproteobacteria H Reversible hydration of carbon dioxide - - 4.2.1.1 ko:K01673 ko00910,map00910 - R00132,R10092 RC02807 ko00000,ko00001,ko01000 - - - Pro_CA QTD1_k127_2708145_14 272624.lpg2255 1.721e-14 80.0 2C39R@1|root,32UYY@2|Bacteria,1NMIM@1224|Proteobacteria,1SFZP@1236|Gammaproteobacteria,1JGI9@118969|Legionellales 118969|Legionellales - - - - - - - - - - - - - - - QTD1_k127_2708145_7 1122604.JONR01000001_gene1976 2.9e-60 218.0 COG2259@1|root,COG2259@2|Bacteria,1R3TF@1224|Proteobacteria 1224|Proteobacteria S DoxX-like family - - - ko:K15977 - - - - ko00000 - - - DoxX QTD1_k127_2708145_11 1123073.KB899241_gene2996 1.407e-41 160.0 COG1595@1|root,COG1595@2|Bacteria,1R9ZN@1224|Proteobacteria,1S27W@1236|Gammaproteobacteria,1X6CI@135614|Xanthomonadales 135614|Xanthomonadales K Sigma-70 region 2 - - - - - - - - - - - - Sigma70_r2,Sigma70_r4_2 QTD1_k127_2708145_0 1198452.Jab_2c18680 3.388e-312 971.0 COG1505@1|root,COG1505@2|Bacteria,1NZ7N@1224|Proteobacteria,2VPBK@28216|Betaproteobacteria,476E0@75682|Oxalobacteraceae 28216|Betaproteobacteria M Prolyl oligopeptidase, N-terminal beta-propeller domain - - 3.4.21.26 ko:K01322 ko04614,map04614 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S9,Peptidase_S9_N QTD1_k127_2708145_12 283942.IL2412 1.949e-24 108.0 2ECBH@1|root,3369W@2|Bacteria,1NE1Q@1224|Proteobacteria,1SF6Y@1236|Gammaproteobacteria,2QG86@267893|Idiomarinaceae 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_2708145_9 1122134.KB893650_gene561 4.224e-49 187.0 2DKFZ@1|root,309D6@2|Bacteria,1REQQ@1224|Proteobacteria,1S796@1236|Gammaproteobacteria,1XMC6@135619|Oceanospirillales 135619|Oceanospirillales S Domain of unknown function (DUF4382) - - - - - - - - - - - - DUF4382 QTD1_k127_2708145_8 903818.KI912269_gene211 7.555e-57 203.0 COG3034@1|root,COG3034@2|Bacteria,3Y5ET@57723|Acidobacteria 57723|Acidobacteria S L,D-transpeptidase catalytic domain - - - - - - - - - - - - YkuD QTD1_k127_2708145_13 1131814.JAFO01000001_gene462 1.512e-18 91.0 2DXAI@1|root,3444M@2|Bacteria,1P0TN@1224|Proteobacteria,2UVMP@28211|Alphaproteobacteria 28211|Alphaproteobacteria - - - - - - - - - - - - - - SnoaL_3 QTD1_k127_2708145_6 1121028.ARQE01000007_gene3759 1.863e-70 248.0 COG1414@1|root,COG1414@2|Bacteria,1QYTM@1224|Proteobacteria,2U04P@28211|Alphaproteobacteria,2PMA0@255475|Aurantimonadaceae 28211|Alphaproteobacteria K helix_turn_helix isocitrate lyase regulation pcaR - - ko:K02624,ko:K20539 ko02024,map02024 - - - ko00000,ko00001,ko03000 - - - HTH_IclR,IclR QTD1_k127_2708145_3 1192759.AKIB01000087_gene2506 1.44e-111 391.0 COG1629@1|root,COG4771@2|Bacteria,1MWKN@1224|Proteobacteria,2TVDT@28211|Alphaproteobacteria,2K0XE@204457|Sphingomonadales 204457|Sphingomonadales P TonB dependent receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - Plug,TonB_dep_Rec QTD1_k127_2708145_10 395495.Lcho_0310 2.361e-48 178.0 COG0625@1|root,COG0625@2|Bacteria,1MY47@1224|Proteobacteria,2VI89@28216|Betaproteobacteria,1KKRH@119065|unclassified Burkholderiales 28216|Betaproteobacteria O Glutathione S-transferase gst - 2.5.1.18 ko:K00799 ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418 - R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905 RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944 ko00000,ko00001,ko01000,ko02000 1.A.12.2.2,1.A.12.3.2 - - GST_C,GST_C_3,GST_N,GST_N_2,GST_N_3 QTD1_k127_2730649_9 1123261.AXDW01000003_gene2020 1.708e-15 76.0 COG2521@1|root,COG2521@2|Bacteria,1Q0VI@1224|Proteobacteria,1S18J@1236|Gammaproteobacteria,1XC99@135614|Xanthomonadales 135614|Xanthomonadales S Methyl-transferase - - - ko:K06983 - - - - ko00000 - - - Methyltransf_30 QTD1_k127_2730649_0 215803.DB30_7204 0.0 1283.0 COG0404@1|root,COG0665@1|root,COG0404@2|Bacteria,COG0665@2|Bacteria,1MUXJ@1224|Proteobacteria,42YZ6@68525|delta/epsilon subdivisions,2WU2X@28221|Deltaproteobacteria,2YXQD@29|Myxococcales 28221|Deltaproteobacteria E FAD dependent oxidoreductase central domain - - - - - - - - - - - - DAO,FAO_M,GCV_T,GCV_T_C QTD1_k127_2730649_6 113395.AXAI01000020_gene6250 3.694e-33 132.0 COG2149@1|root,COG2149@2|Bacteria,1N7T3@1224|Proteobacteria,2UG6T@28211|Alphaproteobacteria,3K1GD@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria S Domain of unknown function (DUF202) - - - ko:K00389 - - - - ko00000 - - - DUF202 QTD1_k127_2730649_4 1458357.BG58_09335 3.299e-34 136.0 COG3439@1|root,COG3439@2|Bacteria,1MZ38@1224|Proteobacteria,2VVUF@28216|Betaproteobacteria,1K8IV@119060|Burkholderiaceae 28216|Betaproteobacteria V Domain of unknown function DUF302 - - - - - - - - - - - - DUF302 QTD1_k127_2730649_10 688245.CtCNB1_0027 0.000207 52.0 COG3637@1|root,COG3637@2|Bacteria,1N7IC@1224|Proteobacteria,2VVZ0@28216|Betaproteobacteria,4AES8@80864|Comamonadaceae 28216|Betaproteobacteria M Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - ko:K12976 - - - - ko00000,ko01000,ko01005 - - - PagL QTD1_k127_2730649_1 1268622.AVS7_02087 1.321e-170 547.0 COG2220@1|root,COG2220@2|Bacteria,1MV20@1224|Proteobacteria,2VKI0@28216|Betaproteobacteria,4AA08@80864|Comamonadaceae 28216|Betaproteobacteria S Zn-dependent hydrolases of the beta-lactamase fold - - - - - - - - - - - - Lactamase_B_2 QTD1_k127_2730649_8 1502852.FG94_05015 2.399e-24 106.0 2EAHU@1|root,334M0@2|Bacteria,1NN7P@1224|Proteobacteria 1224|Proteobacteria S Helix-turn-helix domain - - - - - - - - - - - - HTH_36 QTD1_k127_2730649_7 1120972.AUMH01000003_gene3040 5.506e-30 123.0 COG0346@1|root,COG0346@2|Bacteria,1V235@1239|Firmicutes,4HHQP@91061|Bacilli 91061|Bacilli E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - - - - - - - - - - Glyoxalase QTD1_k127_2730649_3 365044.Pnap_2412 3.654e-55 198.0 COG1651@1|root,COG1651@2|Bacteria,1QZDJ@1224|Proteobacteria,2WHK6@28216|Betaproteobacteria,4AJPP@80864|Comamonadaceae 28216|Betaproteobacteria O Thioredoxin - - - - - - - - - - - - Thioredoxin_4 QTD1_k127_2730649_5 1205680.CAKO01000002_gene2790 6.916e-34 143.0 COG1765@1|root,COG1765@2|Bacteria,1N2BT@1224|Proteobacteria,2TQN7@28211|Alphaproteobacteria,2JQYF@204441|Rhodospirillales 204441|Rhodospirillales O OsmC-like protein - - - ko:K07397 - - - - ko00000 - - - OsmC QTD1_k127_2730649_2 1349767.GJA_4572 6.817e-93 317.0 COG0477@1|root,COG0477@2|Bacteria,1MWXZ@1224|Proteobacteria,2VNYR@28216|Betaproteobacteria 28216|Betaproteobacteria P Major facilitator Superfamily - - - - - - - - - - - - MFS_1 QTD1_k127_2766928_2 1123256.KB907930_gene3550 6.283e-149 482.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,1RMCK@1236|Gammaproteobacteria,1X3DA@135614|Xanthomonadales 135614|Xanthomonadales T Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains pilR - - ko:K02667 ko02020,map02020 M00501 - - ko00000,ko00001,ko00002,ko02022,ko02035 - - - HTH_8,Response_reg,Sigma54_activat QTD1_k127_2766928_6 765911.Thivi_0799 8.229e-38 149.0 COG4969@1|root,COG4969@2|Bacteria,1N7EQ@1224|Proteobacteria,1SCES@1236|Gammaproteobacteria,1WZJS@135613|Chromatiales 135613|Chromatiales U Belongs to the N-Me-Phe pilin family - - - ko:K02650 ko02020,map02020 - - - ko00000,ko00001,ko02035,ko02044 3.A.15.2 - - N_methyl,Pilin QTD1_k127_2766928_0 713586.KB900536_gene1356 1.158e-221 701.0 COG2804@1|root,COG2804@2|Bacteria,1MU7V@1224|Proteobacteria,1RMBS@1236|Gammaproteobacteria,1WXAR@135613|Chromatiales 135613|Chromatiales NU TIGRFAM type IV-A pilus assembly ATPase PilB - - - ko:K02652 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - T2SSE,T2SSE_N QTD1_k127_2766928_1 768671.ThimaDRAFT_4371 3.515e-153 494.0 COG1459@1|root,COG1459@2|Bacteria,1MV4U@1224|Proteobacteria,1RNV0@1236|Gammaproteobacteria,1WWAB@135613|Chromatiales 135613|Chromatiales U Type II secretion system - - - ko:K02653 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - T2SSF QTD1_k127_2766928_3 1026882.MAMP_01430 1.591e-100 336.0 COG1989@1|root,COG1989@2|Bacteria,1MUZF@1224|Proteobacteria,1RN90@1236|Gammaproteobacteria,460AW@72273|Thiotrichales 72273|Thiotrichales NOU Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue pilD - 3.4.23.43 ko:K02654 - M00331 - - ko00000,ko00002,ko01000,ko01002,ko02035,ko02044 3.A.15.2 - - DiS_P_DiS,Peptidase_A24 QTD1_k127_2766928_5 1042876.PPS_0624 1.983e-50 186.0 COG0237@1|root,COG0237@2|Bacteria,1RCXT@1224|Proteobacteria,1S3NR@1236|Gammaproteobacteria,1YVE1@136845|Pseudomonas putida group 1236|Gammaproteobacteria F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A coaE GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 ko:K00859 ko00770,ko01100,map00770,map01100 M00120 R00130 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - iECP_1309.ECP_0104 CoaE QTD1_k127_2766928_4 1335757.SPICUR_07575 1.216e-57 216.0 COG4582@1|root,COG4582@2|Bacteria,1MW69@1224|Proteobacteria,1RNPD@1236|Gammaproteobacteria,1WWH6@135613|Chromatiales 135613|Chromatiales D Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity zapD - - ko:K18778 - - - - ko00000,ko03036 - - - ZapD QTD1_k127_2766928_8 743720.Psefu_3795 5.758e-13 77.0 COG3024@1|root,COG3024@2|Bacteria,1NGJ8@1224|Proteobacteria,1SC7M@1236|Gammaproteobacteria,1YVMN@136845|Pseudomonas putida group 1236|Gammaproteobacteria S Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase yacG GO:0003674,GO:0004857,GO:0005488,GO:0008150,GO:0008270,GO:0008657,GO:0010911,GO:0030234,GO:0032780,GO:0042030,GO:0043086,GO:0043167,GO:0043169,GO:0043462,GO:0044092,GO:0046872,GO:0046914,GO:0050790,GO:0051336,GO:0051346,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0072586,GO:0098772,GO:2000371,GO:2000372 - ko:K09862 - - - - ko00000 - - - YacG QTD1_k127_2766928_7 1123487.KB892846_gene545 5.788e-20 101.0 28IZ5@1|root,2Z8WP@2|Bacteria,1R6WI@1224|Proteobacteria,2W9TK@28216|Betaproteobacteria,2KZMC@206389|Rhodocyclales 206389|Rhodocyclales - - - - - - - - - - - - - - - QTD1_k127_277228_3 1158292.JPOE01000005_gene424 1.369e-36 141.0 COG5008@1|root,COG5008@2|Bacteria,1QTTX@1224|Proteobacteria,2VIWS@28216|Betaproteobacteria,1KJHY@119065|unclassified Burkholderiales 28216|Betaproteobacteria NU twitching motility protein pilU - - ko:K02670 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - T2SSE QTD1_k127_277228_0 572477.Alvin_2322 3.406e-126 414.0 COG5008@1|root,COG5008@2|Bacteria,1QTTX@1224|Proteobacteria,1RN0B@1236|Gammaproteobacteria,1WX4M@135613|Chromatiales 135613|Chromatiales NU PFAM Type II secretion system protein E - - - ko:K02670 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - T2SSE QTD1_k127_277228_1 323261.Noc_0363 5.61e-115 392.0 COG0543@1|root,COG0543@2|Bacteria,1RF43@1224|Proteobacteria,1RQ7W@1236|Gammaproteobacteria,1X286@135613|Chromatiales 135613|Chromatiales C Oxidoreductase FAD-binding domain - - - ko:K02823 ko00240,ko01100,map00240,map01100 - - - ko00000,ko00001 - - - DHODB_Fe-S_bind QTD1_k127_277228_2 292415.Tbd_2582 1.834e-99 334.0 COG0540@1|root,COG0540@2|Bacteria,1MWAB@1224|Proteobacteria,2VHG9@28216|Betaproteobacteria,1KSA3@119069|Hydrogenophilales 119069|Hydrogenophilales F Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain pyrB - 2.1.3.2 ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R01397 RC00064,RC02850 ko00000,ko00001,ko00002,ko01000 - - - OTCace,OTCace_N QTD1_k127_2823124_2 1304878.AUGD01000013_gene2874 7.18e-174 564.0 COG1529@1|root,COG1529@2|Bacteria,1QTTJ@1224|Proteobacteria,2TQVK@28211|Alphaproteobacteria,3JSW3@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria C Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - 1.3.99.16 ko:K07303 - - - - ko00000,ko01000 - - - Ald_Xan_dh_C2 QTD1_k127_2823124_3 765912.Thimo_2330 3.557e-173 565.0 COG0172@1|root,COG0172@2|Bacteria,1MUJF@1224|Proteobacteria,1RNAQ@1236|Gammaproteobacteria,1WX7U@135613|Chromatiales 135613|Chromatiales J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) serS - 6.1.1.11 ko:K01875 ko00970,map00970 M00359,M00360 R03662,R08218 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Seryl_tRNA_N,tRNA-synt_2b QTD1_k127_2823124_1 713586.KB900536_gene614 2.613e-176 574.0 COG2256@1|root,COG2256@2|Bacteria,1MUVS@1224|Proteobacteria,1RPBY@1236|Gammaproteobacteria,1WVV4@135613|Chromatiales 135613|Chromatiales L AAA ATPase, central domain protein - - - ko:K07478 - - - - ko00000 - - - AAA,AAA_assoc_2,MgsA_C,RuvB_N QTD1_k127_2823124_4 159087.Daro_1296 3.079e-37 151.0 COG2834@1|root,COG2834@2|Bacteria,1PXDV@1224|Proteobacteria,2VNNH@28216|Betaproteobacteria,2KWH0@206389|Rhodocyclales 206389|Rhodocyclales M Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) lolA - - ko:K03634 - - - - ko00000 - - - LolA QTD1_k127_2823124_0 396588.Tgr7_2004 7.361e-184 583.0 COG1674@1|root,COG1674@2|Bacteria,1MVPI@1224|Proteobacteria,1RM9A@1236|Gammaproteobacteria,1WWP6@135613|Chromatiales 135613|Chromatiales D DNA segregation ATPase FtsK SpoIIIE - - - ko:K03466 - - - - ko00000,ko03036 3.A.12 - - FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma QTD1_k127_2827572_1 396588.Tgr7_0539 1.549e-74 256.0 COG0811@1|root,COG0811@2|Bacteria,1MX5J@1224|Proteobacteria,1RMSA@1236|Gammaproteobacteria,1X07Q@135613|Chromatiales 135613|Chromatiales U PFAM MotA TolQ ExbB proton channel - - - ko:K03561 - - - - ko00000,ko02000 1.A.30.2.1 - - MotA_ExbB QTD1_k127_2827572_4 420662.Mpe_A1227 1.923e-15 87.0 2AHZN@1|root,318CZ@2|Bacteria,1Q06K@1224|Proteobacteria,2W4WA@28216|Betaproteobacteria,1KNW5@119065|unclassified Burkholderiales 28216|Betaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_2827572_3 1232410.KI421425_gene1548 4.457e-20 101.0 COG0457@1|root,COG0457@2|Bacteria,1N1J2@1224|Proteobacteria,42ZHG@68525|delta/epsilon subdivisions,2WV2W@28221|Deltaproteobacteria,43UR6@69541|Desulfuromonadales 28221|Deltaproteobacteria S Tetratricopeptide repeat - - - - - - - - - - - - - QTD1_k127_2827572_0 420662.Mpe_A1225 5.775e-207 679.0 COG0457@1|root,COG1729@1|root,COG0457@2|Bacteria,COG1729@2|Bacteria,1MX82@1224|Proteobacteria,2VZ4H@28216|Betaproteobacteria,1KN47@119065|unclassified Burkholderiales 28216|Betaproteobacteria S Tetratricopeptide repeat - - - - - - - - - - - - TPR_16 QTD1_k127_2827572_2 420662.Mpe_A1224 3.092e-61 227.0 COG0457@1|root,COG0457@2|Bacteria,1MXSS@1224|Proteobacteria,2VZB4@28216|Betaproteobacteria,1KN0Q@119065|unclassified Burkholderiales 28216|Betaproteobacteria S Tetratricopeptide repeat - - - - - - - - - - - - - QTD1_k127_283138_3 396588.Tgr7_2118 2.143e-63 221.0 COG0501@1|root,COG0501@2|Bacteria,1MUV4@1224|Proteobacteria,1RMN0@1236|Gammaproteobacteria,1WWI6@135613|Chromatiales 135613|Chromatiales O Belongs to the peptidase M48B family htpX - - ko:K03799 - M00743 - - ko00000,ko00002,ko01000,ko01002 - - - Peptidase_M48 QTD1_k127_283138_0 62928.azo1027 1.894e-152 494.0 COG0277@1|root,COG0277@2|Bacteria,1MU6Y@1224|Proteobacteria,2VH5A@28216|Betaproteobacteria,2KV7J@206389|Rhodocyclales 206389|Rhodocyclales C glycolate oxidase subunit GlcD - - - - - - - - - - - - FAD-oxidase_C,FAD_binding_4 QTD1_k127_283138_4 588932.JHOF01000027_gene1542 4.745e-45 183.0 COG0596@1|root,COG0596@2|Bacteria,1Q05H@1224|Proteobacteria,2UJFE@28211|Alphaproteobacteria 28211|Alphaproteobacteria S Serine aminopeptidase, S33 - - - - - - - - - - - - Abhydrolase_6 QTD1_k127_283138_2 1121013.P873_07185 8.323e-99 332.0 COG1946@1|root,COG1946@2|Bacteria,1MV9R@1224|Proteobacteria,1RPFI@1236|Gammaproteobacteria,1X38E@135614|Xanthomonadales 135614|Xanthomonadales I Acyl-CoA thioesterase tesB - - ko:K10805 ko01040,map01040 - - - ko00000,ko00001,ko01000,ko01004 - - - 4HBT_3 QTD1_k127_283138_5 596154.Alide2_2392 8.387e-45 167.0 COG3241@1|root,COG3241@2|Bacteria,1RHV2@1224|Proteobacteria,2VTKW@28216|Betaproteobacteria,4AERP@80864|Comamonadaceae 28216|Betaproteobacteria C Transfers electrons from cytochrome c551 to cytochrome oxidase azu GO:0005575,GO:0005623,GO:0042597,GO:0044464 - - - - - - - - - - Copper-bind QTD1_k127_283138_1 1123073.KB899241_gene3493 9.217e-104 344.0 COG0492@1|root,COG0492@2|Bacteria,1MW14@1224|Proteobacteria,1SMJN@1236|Gammaproteobacteria,1X4B0@135614|Xanthomonadales 135614|Xanthomonadales O Pyridine nucleotide-disulphide oxidoreductase - - 1.8.1.9 ko:K00384 ko00450,map00450 - R02016,R03596,R09372 RC00013,RC02518,RC02873 ko00000,ko00001,ko01000 - - - Pyr_redox_3 QTD1_k127_283433_3 45351.EDO33630 4.419e-09 62.0 COG4805@1|root,2QUES@2759|Eukaryota,39R27@33154|Opisthokonta 33154|Opisthokonta S Bacterial protein of unknown function (DUF885) - - - - - - - - - - - - DUF885 QTD1_k127_283433_1 1121939.L861_10155 7.444e-58 208.0 COG3963@1|root,COG3963@2|Bacteria,1RATY@1224|Proteobacteria,1S1YM@1236|Gammaproteobacteria 1236|Gammaproteobacteria I methyltransferase ksgA1 - - - - - - - - - - - Methyltransf_25,RrnaAD QTD1_k127_283433_2 1382306.JNIM01000001_gene3443 1.651e-24 109.0 COG0023@1|root,COG0023@2|Bacteria,2G9JW@200795|Chloroflexi 200795|Chloroflexi J Translation initiation factor SUI1 - - - ko:K03113 ko03013,map03013 - - - ko00000,ko00001,ko03012 - - - SUI1 QTD1_k127_283433_0 1122613.ATUP01000001_gene776 2.497e-77 264.0 COG1071@1|root,COG1071@2|Bacteria,1MU5R@1224|Proteobacteria,2TSEI@28211|Alphaproteobacteria,43WTU@69657|Hyphomonadaceae 28211|Alphaproteobacteria C 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal bkdA1 - 1.2.4.4 ko:K00166 ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130 M00036 R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997 RC00027,RC00627,RC02743,RC02883,RC02949,RC02953 br01601,ko00000,ko00001,ko00002,ko01000 - - - E1_dh,OxoDH_E1alpha_N QTD1_k127_2836337_2 1122612.AUBA01000005_gene2826 3.438e-90 312.0 COG4774@1|root,COG4774@2|Bacteria,1QXWU@1224|Proteobacteria,2TZ8R@28211|Alphaproteobacteria,2KERA@204457|Sphingomonadales 204457|Sphingomonadales P TonB dependent receptor - - - - - - - - - - - - Plug,TonB_dep_Rec QTD1_k127_2836337_6 1163409.UUA_12033 3.136e-49 189.0 COG3712@1|root,COG3712@2|Bacteria,1PEBY@1224|Proteobacteria,1SY5M@1236|Gammaproteobacteria,1X78Q@135614|Xanthomonadales 135614|Xanthomonadales PT Domain of unknown function (DUF4880) - - - ko:K07165 - - - - ko00000 - - - DUF4880,DUF4974,FecR QTD1_k127_2836337_7 1163409.UUA_12038 2.094e-32 134.0 COG1595@1|root,COG1595@2|Bacteria,1R8PY@1224|Proteobacteria,1RQHE@1236|Gammaproteobacteria,1X7JN@135614|Xanthomonadales 135614|Xanthomonadales K Belongs to the sigma-70 factor family. ECF subfamily rpoE9 - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 QTD1_k127_2836337_4 1031711.RSPO_c02661 1.204e-72 251.0 COG4318@1|root,COG4318@2|Bacteria,1MVIY@1224|Proteobacteria,2VRE8@28216|Betaproteobacteria,1JZQ6@119060|Burkholderiaceae 28216|Betaproteobacteria S ParB-like nuclease - - - - - - - - - - - - ParBc_2 QTD1_k127_2836337_5 84531.JMTZ01000003_gene2339 8.17e-59 225.0 COG0730@1|root,COG0730@2|Bacteria,1R6MR@1224|Proteobacteria,1S0QW@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Sulfite exporter TauE/SafE - - - - - - - - - - - - TauE QTD1_k127_2836337_0 1218084.BBJK01000013_gene1353 7.578e-114 382.0 COG0665@1|root,COG0665@2|Bacteria,1MVGP@1224|Proteobacteria,2VK6W@28216|Betaproteobacteria,1K30R@119060|Burkholderiaceae 28216|Betaproteobacteria E fad dependent oxidoreductase - - - - - - - - - - - - DAO QTD1_k127_2836337_1 1218084.BBJK01000031_gene2889 1.083e-107 371.0 COG3391@1|root,COG3391@2|Bacteria,1R8X0@1224|Proteobacteria,2VNTY@28216|Betaproteobacteria,1K4IG@119060|Burkholderiaceae 28216|Betaproteobacteria S PFAM methylamine dehydrogenase heavy subunit aauB GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.4.9.1,1.4.9.2 ko:K13372,ko:K15229 ko00350,ko00360,ko00680,ko00950,ko01100,ko01110,ko01120,map00350,map00360,map00680,map00950,map01100,map01110,map01120 - R00606,R02382,R02612,R04300 RC00062,RC00189 ko00000,ko00001,ko01000 - - - Me-amine-dh_H QTD1_k127_2836337_3 159450.NH14_25010 7.293e-74 252.0 28V8Y@1|root,2ZHBX@2|Bacteria,1RD5G@1224|Proteobacteria,2VS15@28216|Betaproteobacteria,1K1W1@119060|Burkholderiaceae 28216|Betaproteobacteria C PFAM Methylamine dehydrogenase light chain aauA GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.4.9.1,1.4.9.2 ko:K13371,ko:K15228 ko00350,ko00360,ko00680,ko00950,ko01100,ko01110,ko01120,map00350,map00360,map00680,map00950,map01100,map01110,map01120 - R00606,R02382,R02612,R04300 RC00062,RC00189 ko00000,ko00001,ko01000 - - - Me-amine-dh_L QTD1_k127_2836337_8 1458357.BG58_08140 2.451e-30 128.0 COG2010@1|root,COG2010@2|Bacteria,1NF9H@1224|Proteobacteria,2WECF@28216|Betaproteobacteria,1K7TS@119060|Burkholderiaceae 28216|Betaproteobacteria C PFAM cytochrome c, class I - - - - - - - - - - - - Cytochrom_C,Cytochrome_CBB3 QTD1_k127_2836337_9 640511.BC1002_1585 9.077e-17 83.0 COG2010@1|root,COG2010@2|Bacteria,1N8E4@1224|Proteobacteria,2VWFV@28216|Betaproteobacteria,1K82X@119060|Burkholderiaceae 28216|Betaproteobacteria C Cytochrome c - - - - - - - - - - - - - QTD1_k127_2836337_10 1276756.AUEX01000001_gene1076 6.758e-10 68.0 28JZQ@1|root,2Z9PN@2|Bacteria,1N2WN@1224|Proteobacteria,2VI2S@28216|Betaproteobacteria,4AD2Q@80864|Comamonadaceae 28216|Betaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_2838251_1 1121374.KB891576_gene558 2.465e-154 494.0 COG2159@1|root,COG2159@2|Bacteria,1R5PG@1224|Proteobacteria,1RX6Z@1236|Gammaproteobacteria 1236|Gammaproteobacteria S decarboxylase - - 4.1.1.45 ko:K03392 ko00380,ko01100,map00380,map01100 M00038 R04323 RC00779 ko00000,ko00001,ko00002,ko01000 - - - Amidohydro_2 QTD1_k127_2838251_3 1502850.FG91_00781 5.15e-51 201.0 COG0251@1|root,COG0251@2|Bacteria,1RD6W@1224|Proteobacteria,2U8MG@28211|Alphaproteobacteria,2K4VB@204457|Sphingomonadales 204457|Sphingomonadales J Belongs to the RutC family - - 3.5.99.5 ko:K09021,ko:K15067 ko00240,ko00380,ko01100,map00240,map00380,map01100 - R03887,R09982 RC01015,RC02768 ko00000,ko00001,ko01000 - - - Ribonuc_L-PSP QTD1_k127_2838251_0 1030157.AFMP01000040_gene1567 3.109e-227 713.0 COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,2K1AM@204457|Sphingomonadales 204457|Sphingomonadales C Belongs to the aldehyde dehydrogenase family xylG - 1.2.1.32,1.2.1.60,1.2.1.85 ko:K00151,ko:K10217 ko00350,ko00362,ko00380,ko00622,ko01100,ko01120,ko01220,map00350,map00362,map00380,map00622,map01100,map01120,map01220 M00038,M00533,M00569 R02762,R03889,R04418,R05353 RC00218,RC00254 ko00000,ko00001,ko00002,ko01000 - - - Aldedh QTD1_k127_2838251_2 331869.BAL199_05439 9.167e-74 252.0 COG3791@1|root,COG3791@2|Bacteria,1RFBP@1224|Proteobacteria,2U7YA@28211|Alphaproteobacteria,4BQZ3@82117|unclassified Alphaproteobacteria 28211|Alphaproteobacteria S Glutathione-dependent formaldehyde-activating enzyme - - - - - - - - - - - - GFA QTD1_k127_2838251_4 1234364.AMSF01000082_gene2994 4.094e-20 94.0 2E4IS@1|root,32ZDU@2|Bacteria,1N7N3@1224|Proteobacteria,1S6R3@1236|Gammaproteobacteria,1X8GW@135614|Xanthomonadales 135614|Xanthomonadales S psiF repeat - - - - - - - - - - - - PsiF_repeat QTD1_k127_2844723_0 1380391.JIAS01000008_gene5547 8.884e-171 555.0 COG5598@1|root,COG5598@2|Bacteria,1NQMY@1224|Proteobacteria,2U0NX@28211|Alphaproteobacteria 28211|Alphaproteobacteria H trimethylamine methyltransferase - - 2.1.1.250 ko:K14083 ko00680,ko01120,ko01200,map00680,map01120,map01200 M00563 R09124,R10016 RC00035,RC00732,RC01144,RC02984 ko00000,ko00001,ko00002,ko01000 - - - MTTB QTD1_k127_2844723_1 414684.RC1_3472 5.815e-155 510.0 COG4805@1|root,COG4805@2|Bacteria,1MUBX@1224|Proteobacteria,2TSUQ@28211|Alphaproteobacteria,2JVYQ@204441|Rhodospirillales 204441|Rhodospirillales S Bacterial protein of unknown function (DUF885) - - - - - - - - - - - - DUF885 QTD1_k127_2844723_2 861299.J421_4340 1.133e-135 471.0 COG0520@1|root,COG0520@2|Bacteria,1ZSV8@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Aminotransferase class-V - - - - - - - - - - - - Aminotran_5 QTD1_k127_2936433_3 702113.PP1Y_Mpl824 4.507e-24 118.0 COG1309@1|root,COG1309@2|Bacteria,1N9NV@1224|Proteobacteria,2UN7B@28211|Alphaproteobacteria,2K7NV@204457|Sphingomonadales 204457|Sphingomonadales K BetI-type transcriptional repressor, C-terminal - - - - - - - - - - - - TetR_C_6,TetR_N QTD1_k127_2936433_0 1122135.KB893166_gene2821 5.863e-163 528.0 COG0824@1|root,COG1250@1|root,COG0824@2|Bacteria,COG1250@2|Bacteria,1MV8M@1224|Proteobacteria,2TRAW@28211|Alphaproteobacteria 28211|Alphaproteobacteria I Catalyzes the NAD( )-dependent oxidation of L-carnitine to 3-dehydrocarnitine lcdH - 1.1.1.108 ko:K17735 - - - - ko00000,ko01000 - - - 3HCDH,3HCDH_N,4HBT_2 QTD1_k127_2936433_4 107635.AZUO01000001_gene2795 1.008e-17 88.0 COG3753@1|root,COG3753@2|Bacteria,1N7FF@1224|Proteobacteria,2UFFP@28211|Alphaproteobacteria,36YT0@31993|Methylocystaceae 28211|Alphaproteobacteria S Bacterial protein of unknown function (DUF937) - - - - - - - - - - - - DUF937 QTD1_k127_2936433_1 694427.Palpr_0898 6.419e-140 460.0 COG0531@1|root,COG0531@2|Bacteria,4NDU2@976|Bacteroidetes,2FPUV@200643|Bacteroidia,22WHW@171551|Porphyromonadaceae 976|Bacteroidetes E C-terminus of AA_permease - - - ko:K03294 - - - - ko00000 2.A.3.2 - - AA_permease,AA_permease_2 QTD1_k127_2936433_2 631454.N177_1582 1.487e-87 300.0 COG0436@1|root,COG0436@2|Bacteria,1MW0Z@1224|Proteobacteria,2TTU3@28211|Alphaproteobacteria 28211|Alphaproteobacteria E COG0436 Aspartate tyrosine aromatic aminotransferase - - 2.6.1.1 ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 - R00355,R00694,R00734,R00896,R02433,R02619,R05052 RC00006 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 QTD1_k127_2939000_6 1122134.KB893651_gene2217 0.0003059 46.0 COG0539@1|root,COG0539@2|Bacteria,1MVAV@1224|Proteobacteria,1RMFY@1236|Gammaproteobacteria,1XHWP@135619|Oceanospirillales 135619|Oceanospirillales J thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence rpsA - - ko:K02945 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - S1 QTD1_k127_2939000_5 396588.Tgr7_1542 4.04e-71 247.0 COG0283@1|root,COG0283@2|Bacteria,1MUUD@1224|Proteobacteria,1RNKT@1236|Gammaproteobacteria,1WXNU@135613|Chromatiales 135613|Chromatiales F Belongs to the cytidylate kinase family. Type 1 subfamily cmk - 2.7.4.25 ko:K00945 ko00240,ko01100,map00240,map01100 M00052 R00158,R00512,R01665 RC00002 ko00000,ko00001,ko00002,ko01000 - - - Cytidylate_kin QTD1_k127_2939000_2 1279019.ARQK01000055_gene1998 3.898e-144 489.0 COG0128@1|root,COG0128@2|Bacteria,1MWMK@1224|Proteobacteria,1RQ8U@1236|Gammaproteobacteria,1WX54@135613|Chromatiales 135613|Chromatiales E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate aroA - 2.5.1.19 ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R03460 RC00350 ko00000,ko00001,ko00002,ko01000 - - - EPSP_synthase QTD1_k127_2939000_4 1121015.N789_00165 5.119e-136 447.0 COG0077@1|root,COG1605@1|root,COG0077@2|Bacteria,COG1605@2|Bacteria,1MU60@1224|Proteobacteria,1RNRD@1236|Gammaproteobacteria,1X4R7@135614|Xanthomonadales 135614|Xanthomonadales E Prephenate dehydratase pheA - 4.2.1.51,5.4.99.5 ko:K14170 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00024,M00025 R00691,R01373,R01715 RC00360,RC03116 ko00000,ko00001,ko00002,ko01000 - - - ACT,CM_2,PDT QTD1_k127_2939000_1 1122603.ATVI01000007_gene1449 1.747e-159 514.0 COG0111@1|root,COG0111@2|Bacteria,1MU5Z@1224|Proteobacteria,1RPEY@1236|Gammaproteobacteria,1X4WZ@135614|Xanthomonadales 135614|Xanthomonadales EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family - - - - - - - - - - - - 2-Hacid_dh,2-Hacid_dh_C,ACT QTD1_k127_2939000_3 765910.MARPU_04640 1.135e-141 458.0 COG1932@1|root,COG1932@2|Bacteria,1MUB5@1224|Proteobacteria,1RMKU@1236|Gammaproteobacteria,1WWHV@135613|Chromatiales 135613|Chromatiales E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine serC - 2.6.1.52 ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 M00020,M00124 R04173,R05085 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_5 QTD1_k127_2939000_0 713586.KB900536_gene476 1.575e-208 659.0 COG0188@1|root,COG0188@2|Bacteria,1MUGG@1224|Proteobacteria,1RN03@1236|Gammaproteobacteria,1WXK8@135613|Chromatiales 135613|Chromatiales L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner gyrA - 5.99.1.3 ko:K02469 - - - - ko00000,ko01000,ko03032,ko03400 - - - DNA_gyraseA_C,DNA_topoisoIV QTD1_k127_296222_0 159450.NH14_15235 1.851e-183 584.0 COG1113@1|root,COG1113@2|Bacteria,1MUPS@1224|Proteobacteria,2W9H2@28216|Betaproteobacteria,1KBZG@119060|Burkholderiaceae 28216|Betaproteobacteria E Amino acid permease - - - - - - - - - - - - AA_permease QTD1_k127_296222_5 392499.Swit_4777 4.866e-115 396.0 COG0520@1|root,COG0520@2|Bacteria,1QU0N@1224|Proteobacteria,2VFZ5@28211|Alphaproteobacteria,2K363@204457|Sphingomonadales 204457|Sphingomonadales E Aminotransferase class-V - - - - - - - - - - - - Aminotran_5 QTD1_k127_296222_10 266835.14027084 7.745e-77 271.0 COG1171@1|root,COG1171@2|Bacteria,1MVWJ@1224|Proteobacteria,2UPX9@28211|Alphaproteobacteria,43NXA@69277|Phyllobacteriaceae 28211|Alphaproteobacteria E Pyridoxal-phosphate dependent enzyme - - 4.3.1.19 ko:K01754 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230 M00570 R00220,R00996 RC00418,RC02600 ko00000,ko00001,ko00002,ko01000 - - - PALP QTD1_k127_296222_11 543728.Vapar_5464 1.546e-70 246.0 COG3619@1|root,COG3619@2|Bacteria,1R5V0@1224|Proteobacteria,2W2EQ@28216|Betaproteobacteria 28216|Betaproteobacteria S Protein of unknown function (DUF1275) - - - - - - - - - - - - DUF1275 QTD1_k127_296222_2 983920.Y88_2802 3.829e-140 458.0 COG0477@1|root,COG2814@2|Bacteria,1NU31@1224|Proteobacteria,2U5M0@28211|Alphaproteobacteria,2KEAE@204457|Sphingomonadales 204457|Sphingomonadales EGP of the major facilitator superfamily - - - - - - - - - - - - MFS_1 QTD1_k127_296222_3 987059.RBXJA2T_03688 7.188e-132 429.0 COG1893@1|root,COG1893@2|Bacteria,1MVZ1@1224|Proteobacteria,2VJFW@28216|Betaproteobacteria,1KK6F@119065|unclassified Burkholderiales 28216|Betaproteobacteria H 2-dehydropantoate 2-reductase panE2 - 1.1.1.169 ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R02472 RC00726 ko00000,ko00001,ko00002,ko01000 - - - ApbA,ApbA_C QTD1_k127_296222_4 1144319.PMI16_00712 3.407e-128 413.0 COG1028@1|root,COG1028@2|Bacteria,1MUEV@1224|Proteobacteria,2VH8R@28216|Betaproteobacteria,473C7@75682|Oxalobacteraceae 28216|Betaproteobacteria IQ Belongs to the short-chain dehydrogenases reductases (SDR) family phbB GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 1.1.1.36 ko:K00023 ko00630,ko00650,ko01120,ko01200,map00630,map00650,map01120,map01200 M00373 R01779,R01977 RC00103,RC00117 ko00000,ko00001,ko00002,ko01000 - - - adh_short,adh_short_C2 QTD1_k127_296222_1 1348657.M622_16320 7.364e-181 584.0 COG3243@1|root,COG3243@2|Bacteria,1MU68@1224|Proteobacteria,2VH41@28216|Betaproteobacteria,2KVT9@206389|Rhodocyclales 206389|Rhodocyclales I Poly-beta-hydroxybutyrate polymerase - - - ko:K03821 ko00650,map00650 - R04254 RC00004 ko00000,ko00001,ko01000 - - - PHBC_N,PhaC_N QTD1_k127_296222_8 247633.GP2143_10522 2.938e-97 324.0 COG1028@1|root,COG1028@2|Bacteria,1MUBQ@1224|Proteobacteria,1RQJT@1236|Gammaproteobacteria,1J6JA@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) fabG - 1.1.1.100 ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short,adh_short_C2 QTD1_k127_296222_12 380358.XALC_1097 1.186e-36 145.0 COG5394@1|root,COG5394@2|Bacteria,1RHRC@1224|Proteobacteria,1S2XX@1236|Gammaproteobacteria,1XC5X@135614|Xanthomonadales 135614|Xanthomonadales S synthesis repressor, PhaR phaR - - - - - - - - - - - PHB_acc,PHB_acc_N QTD1_k127_296222_13 1429851.X548_10835 9.986e-07 60.0 28KIX@1|root,2Z9Y0@2|Bacteria,1R3JX@1224|Proteobacteria,1T692@1236|Gammaproteobacteria,1XDIC@135614|Xanthomonadales 135614|Xanthomonadales S Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) - - - - - - - - - - - - PHA_synth_III_E QTD1_k127_296222_7 1442599.JAAN01000026_gene1202 2.892e-106 361.0 COG3243@1|root,COG3243@2|Bacteria,1MU68@1224|Proteobacteria,1RVJU@1236|Gammaproteobacteria,1XCR6@135614|Xanthomonadales 135614|Xanthomonadales I alpha/beta hydrolase fold - - - ko:K03821 ko00650,map00650 - R04254 RC00004 ko00000,ko00001,ko01000 - - - Abhydrolase_1 QTD1_k127_296222_9 1384056.N787_06560 6.988e-86 299.0 COG0111@1|root,COG0111@2|Bacteria,1MW1U@1224|Proteobacteria,1RRQE@1236|Gammaproteobacteria,1X7AT@135614|Xanthomonadales 135614|Xanthomonadales EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - - - - - - - - - - 2-Hacid_dh_C QTD1_k127_296222_6 1123073.KB899243_gene711 7.382e-114 392.0 COG0515@1|root,COG0515@2|Bacteria,1MVEU@1224|Proteobacteria,1S0IU@1236|Gammaproteobacteria,1X52Q@135614|Xanthomonadales 135614|Xanthomonadales KLT Protein tyrosine kinase - - - - - - - - - - - - Pkinase,TPR_10,TPR_12 QTD1_k127_2971347_5 670292.JH26_25185 3.763e-79 271.0 COG1174@1|root,COG1174@2|Bacteria,1MX8D@1224|Proteobacteria,2VETG@28211|Alphaproteobacteria,1JZ55@119045|Methylobacteriaceae 28211|Alphaproteobacteria E Binding-protein-dependent transport system inner membrane component yehW - - ko:K05845,ko:K05846 ko02010,map02010 M00209 - - ko00000,ko00001,ko00002,ko02000 3.A.1.12 - - BPD_transp_1 QTD1_k127_2971347_2 864069.MicloDRAFT_00059800 1.995e-120 394.0 COG1125@1|root,COG1125@2|Bacteria,1QTUC@1224|Proteobacteria,2TTMA@28211|Alphaproteobacteria,1JR68@119045|Methylobacteriaceae 28211|Alphaproteobacteria E PFAM ABC transporter yehX GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0031460,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0072337 - ko:K05847 ko02010,map02010 M00209 - - ko00000,ko00001,ko00002,ko02000 3.A.1.12 - - ABC_tran QTD1_k127_2971347_3 1353531.AZNX01000006_gene5555 4.965e-108 368.0 COG1174@1|root,COG1174@2|Bacteria,1MXA1@1224|Proteobacteria,2TUNH@28211|Alphaproteobacteria,4B7HV@82115|Rhizobiaceae 28211|Alphaproteobacteria E ABC-type proline glycine betaine transport systems, permease component yehY GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0016020,GO:0031460,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0072337 - ko:K05846 ko02010,map02010 M00209 - - ko00000,ko00001,ko00002,ko02000 3.A.1.12 - - BPD_transp_1 QTD1_k127_2971347_4 420324.KI912055_gene5740 2.065e-106 355.0 COG1732@1|root,COG1732@2|Bacteria,1MV9N@1224|Proteobacteria,2TTY6@28211|Alphaproteobacteria,1JR1V@119045|Methylobacteriaceae 28211|Alphaproteobacteria M PFAM Substrate-binding region of ABC-type glycine betaine transport system osmF GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0009628,GO:0009987,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0016020,GO:0031460,GO:0033554,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0071214,GO:0071470,GO:0071474,GO:0071702,GO:0071705,GO:0071944,GO:0072337,GO:0104004 - ko:K05845 ko02010,map02010 M00209 - - ko00000,ko00001,ko00002,ko02000 3.A.1.12 - - OpuAC QTD1_k127_2971347_1 492774.JQMB01000003_gene2703 1.501e-177 572.0 COG0665@1|root,COG0665@2|Bacteria,1MVM6@1224|Proteobacteria,2TRM7@28211|Alphaproteobacteria,4B97I@82115|Rhizobiaceae 28211|Alphaproteobacteria E Sarcosine oxidase subunit beta soxB1 - 1.5.3.1,1.5.99.5 ko:K00303,ko:K22084 ko00260,ko00680,ko01100,ko01120,map00260,map00680,map01100,map01120 - R00609,R00610 RC00060,RC00190,RC00557 ko00000,ko00001,ko01000 - - - DAO QTD1_k127_2971347_6 639283.Snov_0465 7.746e-23 100.0 COG4311@1|root,COG4311@2|Bacteria,1N8ED@1224|Proteobacteria,2UFIN@28211|Alphaproteobacteria,3EZUK@335928|Xanthobacteraceae 28211|Alphaproteobacteria E Sarcosine oxidase, delta subunit family soxD - 1.5.3.1,1.5.99.5 ko:K00304,ko:K22085 ko00260,ko00680,ko01100,ko01120,map00260,map00680,map01100,map01120 - R00609,R00610 RC00060,RC00190,RC00557 ko00000,ko00001,ko01000 - - - SoxD QTD1_k127_2971347_0 1510531.JQJJ01000012_gene1755 1.796e-233 749.0 COG0404@1|root,COG0446@1|root,COG0404@2|Bacteria,COG0446@2|Bacteria,1MVEK@1224|Proteobacteria,2TTD7@28211|Alphaproteobacteria,3JTMR@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria E Glycine cleavage T-protein C-terminal barrel domain - - 1.5.3.1,1.5.99.5 ko:K00302,ko:K22086 ko00260,ko00680,ko01100,ko01120,map00260,map00680,map01100,map01120 - R00609,R00610 RC00060,RC00190,RC00557 ko00000,ko00001,ko01000 - - - FAD_oxidored,Fer2_4,GCV_T,GCV_T_C,Pyr_redox_2 QTD1_k127_298810_0 1458357.BG58_36520 3.67e-200 640.0 COG1960@1|root,COG1960@2|Bacteria,1MU20@1224|Proteobacteria,2VGZD@28216|Betaproteobacteria,1K5NT@119060|Burkholderiaceae 28216|Betaproteobacteria I Acyl-CoA dehydrogenase N terminal - - - ko:K20035 ko00920,map00920 - R11130 RC03363 ko00000,ko00001,ko01000 - - - Acyl-CoA_dh_1,Acyl-CoA_dh_C,Acyl-CoA_dh_M,Acyl-CoA_dh_N,AcylCoA_DH_N QTD1_k127_298810_10 196367.JNFG01000007_gene6763 2.085e-29 124.0 2DNM2@1|root,32Y26@2|Bacteria,1N7KR@1224|Proteobacteria,2WFQB@28216|Betaproteobacteria,1KI4S@119060|Burkholderiaceae 28216|Betaproteobacteria S Lipocalin-like domain - - - - - - - - - - - - Lipocalin_5 QTD1_k127_298810_1 1071679.BG57_02480 1.686e-87 298.0 COG0656@1|root,COG0656@2|Bacteria,1MX6S@1224|Proteobacteria,2VNCV@28216|Betaproteobacteria,1K4BE@119060|Burkholderiaceae 28216|Betaproteobacteria S aldo keto reductase - - - - - - - - - - - - Aldo_ket_red QTD1_k127_298810_11 269799.Gmet_1200 3.65e-25 120.0 COG1075@1|root,COG4995@1|root,COG1075@2|Bacteria,COG4995@2|Bacteria,1MUIQ@1224|Proteobacteria,42XEE@68525|delta/epsilon subdivisions,2WT63@28221|Deltaproteobacteria 28221|Deltaproteobacteria S CHAT domain - - - - - - - - - - - - CHAT,LCAT QTD1_k127_298810_12 397945.Aave_1897 2.211e-20 96.0 COG2847@1|root,COG2847@2|Bacteria,1MZ3M@1224|Proteobacteria,2VTY7@28216|Betaproteobacteria,4AEN7@80864|Comamonadaceae 28216|Betaproteobacteria S Copper chaperone PCu(A)C - - - ko:K09796 - - - - ko00000,ko03110 - - - PCuAC QTD1_k127_298810_7 1121033.AUCF01000001_gene2030 3.816e-57 210.0 COG0697@1|root,COG0697@2|Bacteria,1RCED@1224|Proteobacteria,2U66Q@28211|Alphaproteobacteria,2JRZ1@204441|Rhodospirillales 204441|Rhodospirillales EG EamA-like transporter family - - - - - - - - - - - - EamA QTD1_k127_298810_5 391600.ABRU01000050_gene61 1.229e-62 238.0 COG4757@1|root,COG4757@2|Bacteria,1Q1V6@1224|Proteobacteria,2U1QB@28211|Alphaproteobacteria,2KIQ7@204458|Caulobacterales 204458|Caulobacterales S Serine aminopeptidase, S33 - - - - - - - - - - - - Hydrolase_4 QTD1_k127_298810_2 314278.NB231_10793 4.15e-87 297.0 COG0583@1|root,COG0583@2|Bacteria,1MVA1@1224|Proteobacteria,1RPAJ@1236|Gammaproteobacteria,1WWM6@135613|Chromatiales 135613|Chromatiales K Transcriptional regulator - - - ko:K04761 ko02026,map02026 - - - ko00000,ko00001,ko03000 - - - HTH_1,LysR_substrate QTD1_k127_298810_3 1382359.JIAL01000001_gene1828 1.033e-86 290.0 COG0450@1|root,COG0450@2|Bacteria,3Y2XI@57723|Acidobacteria,2JIHR@204432|Acidobacteriia 204432|Acidobacteriia O Redoxin - - 1.11.1.15 ko:K03386 ko04214,map04214 - - - ko00000,ko00001,ko01000,ko04147 - - - AhpC-TSA QTD1_k127_298810_8 1122135.KB893134_gene3909 1.14e-52 191.0 COG2128@1|root,COG2128@2|Bacteria,1RDRU@1224|Proteobacteria,2U8D7@28211|Alphaproteobacteria 28211|Alphaproteobacteria O Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity ahpD - - ko:K04756 - - - - ko00000 - - - CMD QTD1_k127_298810_4 1500890.JQNL01000001_gene1771 6.156e-67 239.0 COG0614@1|root,COG0614@2|Bacteria,1MWVF@1224|Proteobacteria,1RMV8@1236|Gammaproteobacteria,1X6SG@135614|Xanthomonadales 135614|Xanthomonadales P Periplasmic binding protein - - - - - - - - - - - - Peripla_BP_2 QTD1_k127_298810_6 1283300.ATXB01000001_gene1278 1.533e-58 212.0 COG1666@1|root,COG1666@2|Bacteria,1RDTF@1224|Proteobacteria,1S3RU@1236|Gammaproteobacteria,1XEYS@135618|Methylococcales 135618|Methylococcales S Belongs to the UPF0234 family - - - ko:K09767 - - - - ko00000 - - - DUF520 QTD1_k127_298810_9 314278.NB231_05801 5.083e-33 132.0 2CECF@1|root,32RZM@2|Bacteria,1N130@1224|Proteobacteria,1S98I@1236|Gammaproteobacteria 1236|Gammaproteobacteria S pilin assembly protein - - - - - - - - - - - - - QTD1_k127_298810_13 479434.Sthe_1878 3.026e-09 61.0 COG0147@1|root,COG0147@2|Bacteria,2G5M7@200795|Chloroflexi,27XZ8@189775|Thermomicrobia 189775|Thermomicrobia H Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia trpE - 4.1.3.27 ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 M00023 R00985,R00986 RC00010,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 - - - Anth_synt_I_N,Chorismate_bind QTD1_k127_2997635_1 1123257.AUFV01000015_gene3609 7.23e-175 552.0 COG0174@1|root,COG0174@2|Bacteria,1MUGQ@1224|Proteobacteria,1RMD1@1236|Gammaproteobacteria,1X3GI@135614|Xanthomonadales 135614|Xanthomonadales E highly regulated protein controlled by the addition removal of adenylyl groups by adenylyltransferase from specific tyrosine residues glnA - 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 - R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 - - - Gln-synt_C,Gln-synt_N QTD1_k127_2997635_12 1268635.Loa_01613 7.17e-19 95.0 2E42P@1|root,32YZ5@2|Bacteria,1N868@1224|Proteobacteria,1SCUM@1236|Gammaproteobacteria,1JEK9@118969|Legionellales 118969|Legionellales S Domain of unknown function (DUF4124) - - - - - - - - - - - - DUF4124 QTD1_k127_2997635_4 396588.Tgr7_3261 2.974e-99 336.0 COG3852@1|root,COG3852@2|Bacteria,1MVN6@1224|Proteobacteria,1RN15@1236|Gammaproteobacteria,1WWFQ@135613|Chromatiales 135613|Chromatiales T signal transduction histidine kinase - - 2.7.13.3 ko:K07708 ko02020,map02020 M00497 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HATPase_c,HisKA,PAS,PAS_4 QTD1_k127_2997635_0 349124.Hhal_1215 4.309e-183 590.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,1RMCK@1236|Gammaproteobacteria,1WW4B@135613|Chromatiales 135613|Chromatiales T response regulator glnG - - ko:K07712 ko02020,map02020 M00497 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat QTD1_k127_2997635_6 1415779.JOMH01000001_gene1011 1.694e-74 264.0 COG0668@1|root,COG0668@2|Bacteria,1MXD2@1224|Proteobacteria,1RNUB@1236|Gammaproteobacteria,1X5AX@135614|Xanthomonadales 135614|Xanthomonadales M Mechanosensitive ion channel - - - - - - - - - - - - MS_channel QTD1_k127_2997635_10 313625.BL107_07519 1.135e-34 142.0 COG1651@1|root,COG1651@2|Bacteria,1G379@1117|Cyanobacteria,1H077@1129|Synechococcus 1117|Cyanobacteria O thioredoxin domain - - - - - - - - - - - - DSBA,Thioredoxin_4 QTD1_k127_2997635_8 1122604.JONR01000023_gene4164 7.158e-62 237.0 COG3115@1|root,COG3115@2|Bacteria,1QR19@1224|Proteobacteria,1S736@1236|Gammaproteobacteria,1X6RG@135614|Xanthomonadales 135614|Xanthomonadales D YXWGXW repeat (2 copies) - - - - - - - - - - - - YXWGXW QTD1_k127_2997635_2 713586.KB900536_gene2073 1.615e-148 497.0 COG0167@1|root,COG0167@2|Bacteria,1MU7C@1224|Proteobacteria,1T02D@1236|Gammaproteobacteria,1WW5T@135613|Chromatiales 135613|Chromatiales F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily pyrD - 1.3.1.14 ko:K17828 ko00240,ko01100,map00240,map01100 M00051 R01869 RC00051 ko00000,ko00001,ko00002,ko01000 - - - DHO_dh QTD1_k127_2997635_9 380358.XALC_3076 2.7e-51 202.0 COG0219@1|root,COG0219@2|Bacteria,1RCY4@1224|Proteobacteria,1S3PI@1236|Gammaproteobacteria,1X643@135614|Xanthomonadales 135614|Xanthomonadales J Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide trmL - 2.1.1.207 ko:K03216 - - - - ko00000,ko01000,ko03016 - - - SpoU_methylase QTD1_k127_2997635_7 1380394.JADL01000001_gene2132 4.244e-62 226.0 COG0346@1|root,COG0346@2|Bacteria,1N3K0@1224|Proteobacteria,2UEB4@28211|Alphaproteobacteria,2JWKN@204441|Rhodospirillales 204441|Rhodospirillales E lactoylglutathione lyase activity - - - - - - - - - - - - - QTD1_k127_2997635_11 272134.KB731324_gene4759 1.173e-24 113.0 COG1432@1|root,COG1432@2|Bacteria,1GENW@1117|Cyanobacteria 1117|Cyanobacteria S Conserved Protein - - - - - - - - - - - - - QTD1_k127_2997635_3 396588.Tgr7_2703 2.215e-111 372.0 COG4974@1|root,COG4974@2|Bacteria,1MVAN@1224|Proteobacteria,1RMSS@1236|Gammaproteobacteria,1X1FE@135613|Chromatiales 135613|Chromatiales L Phage integrase, N-terminal SAM-like domain - - - - - - - - - - - - Phage_int_SAM_4 QTD1_k127_2997635_13 426355.Mrad2831_5110 3.988e-10 69.0 COG1585@1|root,COG1585@2|Bacteria,1N241@1224|Proteobacteria,2UC8X@28211|Alphaproteobacteria,1JUIJ@119045|Methylobacteriaceae 28211|Alphaproteobacteria OU NfeD-like C-terminal, partner-binding MA20_06475 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - ko:K07340 - - - - ko00000 - - - NfeD QTD1_k127_2997635_5 330214.NIDE4312 6.776e-91 303.0 COG0330@1|root,COG0330@2|Bacteria,3J0NF@40117|Nitrospirae 40117|Nitrospirae O prohibitin homologues - - - - - - - - - - - - Band_7 QTD1_k127_3001806_1 1123261.AXDW01000010_gene257 4.946e-140 453.0 COG0201@1|root,COG0201@2|Bacteria,1MVU7@1224|Proteobacteria,1RNJV@1236|Gammaproteobacteria,1X39Y@135614|Xanthomonadales 135614|Xanthomonadales U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently secY - - ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5 - - SecY QTD1_k127_3001806_5 926550.CLDAP_03870 1.679e-12 67.0 COG0257@1|root,COG0257@2|Bacteria 2|Bacteria J Belongs to the bacterial ribosomal protein bL36 family rpmJ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02919 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L36 QTD1_k127_3001806_4 1121013.P873_10040 1.276e-49 179.0 COG0099@1|root,COG0099@2|Bacteria,1RD1G@1224|Proteobacteria,1S3NX@1236|Gammaproteobacteria,1X6GV@135614|Xanthomonadales 135614|Xanthomonadales J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits rpsM GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02952 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S13 QTD1_k127_3001806_3 1255043.TVNIR_2552 4.754e-61 213.0 COG0100@1|root,COG0100@2|Bacteria,1RD0A@1224|Proteobacteria,1S3Q2@1236|Gammaproteobacteria,1WYDZ@135613|Chromatiales 135613|Chromatiales J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome rpsK - - ko:K02948 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S11 QTD1_k127_3001806_2 1499686.BN1079_03025 2.988e-84 284.0 COG0522@1|root,COG0522@2|Bacteria,1MW0U@1224|Proteobacteria,1RQ38@1236|Gammaproteobacteria 1236|Gammaproteobacteria J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit rpsD GO:0000028,GO:0000900,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006417,GO:0006446,GO:0006450,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0015935,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030371,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031554,GO:0031564,GO:0032268,GO:0032269,GO:0032270,GO:0032991,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0045727,GO:0045903,GO:0045947,GO:0048027,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990145,GO:1990904,GO:2000112,GO:2000113,GO:2001141 - ko:K02986 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S4,S4 QTD1_k127_3001806_0 396588.Tgr7_2299 5.383e-145 466.0 COG0202@1|root,COG0202@2|Bacteria,1MU75@1224|Proteobacteria,1RMU3@1236|Gammaproteobacteria,1WWB2@135613|Chromatiales 135613|Chromatiales K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates rpoA - 2.7.7.6 ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 - - - RNA_pol_A_CTD,RNA_pol_A_bac,RNA_pol_L QTD1_k127_3024772_0 1260251.SPISAL_00395 1.441e-219 701.0 COG2079@1|root,COG2079@2|Bacteria,1MUIG@1224|Proteobacteria,1RPQN@1236|Gammaproteobacteria,1WWIP@135613|Chromatiales 135613|Chromatiales S 2-methylcitrate dehydratase prpD - 4.2.1.79 ko:K01720 ko00640,map00640 - R04424 RC01152 ko00000,ko00001,ko01000 - - - MmgE_PrpD QTD1_k127_3024772_1 760117.JN27_03015 4.591e-192 610.0 COG0372@1|root,COG0372@2|Bacteria,1MUKX@1224|Proteobacteria,2VHJZ@28216|Betaproteobacteria,472IE@75682|Oxalobacteraceae 28216|Betaproteobacteria C Belongs to the citrate synthase family prpC - 2.3.3.5 ko:K01659 ko00640,map00640 - R00931 RC00004,RC00406,RC02827 ko00000,ko00001,ko01000 - - - Citrate_synt QTD1_k127_3024772_4 349124.Hhal_1072 4.568e-125 406.0 COG2513@1|root,COG2513@2|Bacteria,1N4VT@1224|Proteobacteria,1RMR5@1236|Gammaproteobacteria,1WWC7@135613|Chromatiales 135613|Chromatiales G Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate prpB - 4.1.3.30 ko:K03417 ko00640,map00640 - R00409 RC00286,RC00287 ko00000,ko00001,ko01000 - - - PEP_mutase QTD1_k127_3024772_6 472759.Nhal_2510 3.284e-120 395.0 COG0604@1|root,COG0604@2|Bacteria,1MV3W@1224|Proteobacteria,1RMHG@1236|Gammaproteobacteria,1WX3U@135613|Chromatiales 135613|Chromatiales C PFAM Alcohol dehydrogenase - - 1.6.5.5 ko:K00344 - - - - ko00000,ko01000 - - - ADH_N,ADH_zinc_N QTD1_k127_3024772_3 215803.DB30_7910 9.577e-126 410.0 COG0491@1|root,COG0491@2|Bacteria,1MXKX@1224|Proteobacteria,42R8E@68525|delta/epsilon subdivisions,2WN6V@28221|Deltaproteobacteria,2YZHF@29|Myxococcales 28221|Deltaproteobacteria S Metallo-beta-lactamase superfamily - - - - - - - - - - - - Lactamase_B QTD1_k127_3024772_2 1384054.N790_10680 2.147e-183 596.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,1MUJ3@1224|Proteobacteria,1RZWS@1236|Gammaproteobacteria,1X4EF@135614|Xanthomonadales 135614|Xanthomonadales EU Dienelactone hydrolase family - - - - - - - - - - - - PD40,Peptidase_S9 QTD1_k127_3024772_5 748247.AZKH_3438 2.823e-120 405.0 COG0642@1|root,COG0642@2|Bacteria,1QTSX@1224|Proteobacteria,2W1JF@28216|Betaproteobacteria,2KW6A@206389|Rhodocyclales 206389|Rhodocyclales T His Kinase A (phosphoacceptor) domain - - 2.7.13.3 ko:K02484 - - - - ko00000,ko01000,ko01001,ko02022 - - - HATPase_c,HisKA QTD1_k127_3024772_8 1192124.LIG30_2441 5.294e-88 295.0 COG0745@1|root,COG0745@2|Bacteria,1N7TJ@1224|Proteobacteria,2WEAK@28216|Betaproteobacteria,1K11E@119060|Burkholderiaceae 28216|Betaproteobacteria K response regulator qseB - - ko:K02483,ko:K07666 ko02020,ko02024,map02020,map02024 M00453 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C QTD1_k127_3024772_10 713586.KB900536_gene2133 2.056e-47 181.0 COG0357@1|root,COG0357@2|Bacteria,1MY0K@1224|Proteobacteria,1RMRZ@1236|Gammaproteobacteria,1WXDT@135613|Chromatiales 135613|Chromatiales J Specifically methylates the N7 position of guanine in position 527 of 16S rRNA rsmG - 2.1.1.170 ko:K03501 - - - - ko00000,ko01000,ko03009,ko03036 - - - GidB QTD1_k127_3024772_9 93220.LV28_03280 2.044e-52 189.0 COG1522@1|root,COG1522@2|Bacteria,1RCEQ@1224|Proteobacteria,2W3NY@28216|Betaproteobacteria,1KE6C@119060|Burkholderiaceae 28216|Betaproteobacteria K helix_turn_helix ASNC type - - - ko:K05800 - - - - ko00000,ko03000 - - - AsnC_trans_reg,HTH_AsnC-type QTD1_k127_3024772_7 414684.RC1_1776 1.125e-113 377.0 COG0334@1|root,COG0334@2|Bacteria,1MUXS@1224|Proteobacteria,2VGKD@28211|Alphaproteobacteria,2JP8T@204441|Rhodospirillales 204441|Rhodospirillales E Glutamate/Leucine/Phenylalanine/Valine dehydrogenase - - 1.4.1.9 ko:K00263 ko00280,ko00290,ko01100,ko01110,ko01130,map00280,map00290,map01100,map01110,map01130 - R01088,R01434,R02196 RC00006,RC00036 ko00000,ko00001,ko01000 - - - ELFV_dehydrog,ELFV_dehydrog_N QTD1_k127_3024772_11 1517416.IDAT_11085 8.379e-15 74.0 COG1192@1|root,COG1192@2|Bacteria,1MV43@1224|Proteobacteria,1RNJK@1236|Gammaproteobacteria,2QFJ3@267893|Idiomarinaceae 1236|Gammaproteobacteria D 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family parA - - ko:K03496 - - - - ko00000,ko03036,ko04812 - - - AAA_31 QTD1_k127_3061209_10 1211114.ALIP01000001_gene525 4.721e-23 101.0 COG1845@1|root,COG1845@2|Bacteria,1MUCK@1224|Proteobacteria,1RN9D@1236|Gammaproteobacteria,1X3ZT@135614|Xanthomonadales 135614|Xanthomonadales C Heme copper-type cytochrome quinol oxidase subunit 3 cox3 - 1.9.3.1 ko:K02276 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.4,3.D.4.6 - - COX3 QTD1_k127_3061209_7 1123257.AUFV01000009_gene2228 3.722e-45 171.0 COG3175@1|root,COG3175@2|Bacteria,1RDTU@1224|Proteobacteria,1S5XA@1236|Gammaproteobacteria,1X5Z6@135614|Xanthomonadales 135614|Xanthomonadales O cytochrome c oxidase assembly protein cox11 - - ko:K02258 ko00190,ko01100,ko04714,map00190,map01100,map04714 M00154 - - ko00000,ko00001,ko00002,ko03029 3.D.4.8 - - CtaG_Cox11 QTD1_k127_3061209_0 1260251.SPISAL_01500 4.525e-275 855.0 COG0843@1|root,COG0843@2|Bacteria,1MU7S@1224|Proteobacteria,1RPC3@1236|Gammaproteobacteria,1WWX1@135613|Chromatiales 135613|Chromatiales C Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B - - 1.9.3.1 ko:K02274 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.2,3.D.4.3,3.D.4.4,3.D.4.6 - - COX1 QTD1_k127_3061209_4 243233.MCA0879 2.968e-91 309.0 COG1622@1|root,COG2010@1|root,COG1622@2|Bacteria,COG2010@2|Bacteria,1MWHZ@1224|Proteobacteria,1RP4H@1236|Gammaproteobacteria,1XECZ@135618|Methylococcales 135618|Methylococcales C Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) - - 1.9.3.1 ko:K02275 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.2,3.D.4.4,3.D.4.6 - - COX2,COX2_TM,Cytochrome_CBB3 QTD1_k127_3061209_9 105559.Nwat_3100 7.215e-25 110.0 COG5488@1|root,COG5488@2|Bacteria,1N9B7@1224|Proteobacteria,1SF1J@1236|Gammaproteobacteria,1X1FG@135613|Chromatiales 135613|Chromatiales S Integral membrane protein (DUF2244) - - - - - - - - - - - - DUF2244 QTD1_k127_3061209_6 472759.Nhal_0768 2.044e-56 206.0 COG0132@1|root,COG0132@2|Bacteria,1RDRK@1224|Proteobacteria,1RSHS@1236|Gammaproteobacteria,1WXWI@135613|Chromatiales 135613|Chromatiales H Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring bioD - 6.3.3.3 ko:K01935 ko00780,ko01100,map00780,map01100 M00123,M00573,M00577 R03182 RC00868 ko00000,ko00001,ko00002,ko01000 - - - AAA_26 QTD1_k127_3061209_5 572477.Alvin_0523 3.916e-84 290.0 COG0500@1|root,COG2226@2|Bacteria,1PA5F@1224|Proteobacteria,1RY7A@1236|Gammaproteobacteria,1WW45@135613|Chromatiales 135613|Chromatiales H Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway bioC - 2.1.1.197 ko:K02169 ko00780,ko01100,map00780,map01100 M00572 R09543 RC00003,RC00460 ko00000,ko00001,ko00002,ko01000 - - - Methyltransf_11 QTD1_k127_3061209_8 1163617.SCD_n02664 2.055e-43 176.0 COG2267@1|root,COG2267@2|Bacteria,1N2R9@1224|Proteobacteria,2VRME@28216|Betaproteobacteria 28216|Betaproteobacteria I The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters bioH - 3.1.1.85 ko:K02170 ko00780,ko01100,map00780,map01100 M00572 R09725 RC00460,RC00461 ko00000,ko00001,ko00002,ko01000 - - - Abhydrolase_1,Abhydrolase_6 QTD1_k127_3061209_2 1049564.TevJSym_aa00790 2.501e-116 390.0 COG0156@1|root,COG0156@2|Bacteria,1MVVH@1224|Proteobacteria,1RNS6@1236|Gammaproteobacteria,1J4PX@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria H Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide bioF GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.47 ko:K00652 ko00780,ko01100,map00780,map01100 M00123,M00573,M00577 R03210,R10124 RC00004,RC00039,RC02725 ko00000,ko00001,ko00002,ko01000,ko01007 - - iEC55989_1330.EC55989_0819,iECO111_1330.ECO111_0837,iECO26_1355.ECO26_0902,iSDY_1059.SDY_0830 Aminotran_1_2 QTD1_k127_3061209_1 1122603.ATVI01000001_gene1935 1.212e-136 445.0 COG0502@1|root,COG0502@2|Bacteria,1MVFF@1224|Proteobacteria,1RMEQ@1236|Gammaproteobacteria,1X3XQ@135614|Xanthomonadales 135614|Xanthomonadales H Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism bioB - 2.8.1.6 ko:K01012 ko00780,ko01100,map00780,map01100 M00123,M00573,M00577 R01078 RC00441 ko00000,ko00001,ko00002,ko01000 - - - BATS,Radical_SAM QTD1_k127_3061209_11 1123368.AUIS01000004_gene146 9.906e-20 93.0 COG0818@1|root,COG0818@2|Bacteria,1QCW0@1224|Proteobacteria,1T8PN@1236|Gammaproteobacteria,2ND85@225057|Acidithiobacillales 225057|Acidithiobacillales M Prokaryotic diacylglycerol kinase - - 2.7.1.107 ko:K00901 ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00561,map00564,map01100,map01110,map04070,map04072,map05231 - R02240 RC00002,RC00017 ko00000,ko00001,ko01000 - - - DAGK_prokar QTD1_k127_3061209_3 713586.KB900536_gene2247 7.218e-97 326.0 COG0382@1|root,COG0382@2|Bacteria,1MV4Q@1224|Proteobacteria,1RMZ1@1236|Gammaproteobacteria,1WWA7@135613|Chromatiales 135613|Chromatiales H Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate ubiA - 2.5.1.39 ko:K03179 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00117 R05000,R05615 RC00209,RC02895 ko00000,ko00001,ko00002,ko01000,ko01006 - - - UbiA QTD1_k127_3073272_3 323261.Noc_1210 1.981e-154 492.0 COG1875@1|root,COG1875@2|Bacteria,1MUX1@1224|Proteobacteria,1RMQN@1236|Gammaproteobacteria,1WWB1@135613|Chromatiales 135613|Chromatiales T SMART Nucleotide binding protein, PINc - - - ko:K07175 - - - - ko00000 - - - PIN_4,PhoH QTD1_k127_3073272_7 1304275.C41B8_15932 5.02e-77 278.0 COG4783@1|root,COG4783@2|Bacteria,1MVFV@1224|Proteobacteria,1RP5S@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state bepA GO:0003674,GO:0003756,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005575,GO:0005623,GO:0006457,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016043,GO:0016787,GO:0016853,GO:0016860,GO:0016864,GO:0019538,GO:0022607,GO:0030163,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043163,GO:0043165,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044091,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044464,GO:0045229,GO:0046872,GO:0051603,GO:0061024,GO:0061077,GO:0070011,GO:0071704,GO:0071709,GO:0071840,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - - - - - - - - - - Peptidase_M48,TPR_19 QTD1_k127_3073272_10 553385.JEMF01000050_gene2149 3.329e-58 212.0 COG2853@1|root,COG2853@2|Bacteria,1MVX0@1224|Proteobacteria,1RNPS@1236|Gammaproteobacteria,1XJNB@135619|Oceanospirillales 135619|Oceanospirillales M (Lipo)protein vacJ - - ko:K04754 - - - - ko00000 - - - MlaA QTD1_k127_3073272_19 748247.AZKH_0749 1.39e-05 57.0 COG3113@1|root,COG3113@2|Bacteria,1NGIE@1224|Proteobacteria,2VX2D@28216|Betaproteobacteria,2KX6J@206389|Rhodocyclales 206389|Rhodocyclales S STAS domain - - - ko:K07122 ko02010,map02010 M00210 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27.3 - - STAS_2 QTD1_k127_3073272_15 767434.Fraau_0417 2.411e-35 147.0 COG2854@1|root,COG2854@2|Bacteria,1R4I3@1224|Proteobacteria,1RY1E@1236|Gammaproteobacteria,1XBZ7@135614|Xanthomonadales 135614|Xanthomonadales Q ABC-type transport system involved in resistance to organic solvents auxiliary component - - - ko:K07323 ko02010,map02010 M00210 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27.3 - - MlaC QTD1_k127_3073272_13 765912.Thimo_2753 1.768e-39 152.0 COG1463@1|root,COG1463@2|Bacteria,1NCUG@1224|Proteobacteria,1RQ0Y@1236|Gammaproteobacteria,1WXYG@135613|Chromatiales 135613|Chromatiales Q PFAM Mammalian cell entry related domain protein - - - ko:K02067 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - MlaD QTD1_k127_3073272_8 266265.Bxe_A0388 7.897e-77 269.0 COG0767@1|root,COG0767@2|Bacteria,1MVPN@1224|Proteobacteria,2VI5T@28216|Betaproteobacteria,1K22X@119060|Burkholderiaceae 28216|Betaproteobacteria Q ABC transporter permease ttg2B - - ko:K02066 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - MlaE QTD1_k127_3073272_6 713586.KB900536_gene1408 3.49e-102 342.0 COG1127@1|root,COG1127@2|Bacteria,1MUSD@1224|Proteobacteria,1RMCJ@1236|Gammaproteobacteria,1WW98@135613|Chromatiales 135613|Chromatiales Q PFAM ABC transporter - - - ko:K02065 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - ABC_tran QTD1_k127_3073272_4 1411123.JQNH01000001_gene2532 7.534e-134 435.0 COG3588@1|root,COG3588@2|Bacteria,1MVFK@1224|Proteobacteria,2TSIV@28211|Alphaproteobacteria 28211|Alphaproteobacteria G fructose-bisphosphate aldolase fbaB - 4.1.2.13 ko:K01623 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00003,M00165,M00167 R01068,R01070,R01829,R02568 RC00438,RC00439,RC00603,RC00604 ko00000,ko00001,ko00002,ko01000,ko03036,ko04131,ko04147 - - - Glycolytic QTD1_k127_3073272_14 42565.FP66_04250 1.606e-35 140.0 COG1959@1|root,COG1959@2|Bacteria,1N0E2@1224|Proteobacteria,1S915@1236|Gammaproteobacteria,1XMA5@135619|Oceanospirillales 135619|Oceanospirillales K transcriptional regulator - - - - - - - - - - - - Rrf2 QTD1_k127_3073272_0 472759.Nhal_0688 2.044e-253 797.0 COG0719@1|root,COG0719@2|Bacteria,1MVKY@1224|Proteobacteria,1RQ65@1236|Gammaproteobacteria,1WWT1@135613|Chromatiales 135613|Chromatiales O TIGRFAM FeS assembly protein SufB - - - ko:K09014 - - - - ko00000 - - - UPF0051 QTD1_k127_3073272_5 105559.Nwat_0645 8.861e-113 373.0 COG0396@1|root,COG0396@2|Bacteria,1MUGK@1224|Proteobacteria,1RPFE@1236|Gammaproteobacteria,1WWC1@135613|Chromatiales 135613|Chromatiales O TIGRFAM FeS assembly ATPase SufC - - - ko:K09013 - - - - ko00000,ko02000 - - - ABC_tran QTD1_k127_3073272_11 340.xcc-b100_1393 2.049e-56 214.0 COG0719@1|root,COG0719@2|Bacteria,1MVK0@1224|Proteobacteria,1RP2A@1236|Gammaproteobacteria,1X3C4@135614|Xanthomonadales 135614|Xanthomonadales O abc transporter, permease sufD - - ko:K09015 - - - - ko00000 - - - UPF0051 QTD1_k127_3073272_2 243233.MCA0989 9.053e-167 544.0 COG0520@1|root,COG0520@2|Bacteria,1MUPD@1224|Proteobacteria,1RNIY@1236|Gammaproteobacteria,1XE5Z@135618|Methylococcales 135618|Methylococcales E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - 2.8.1.7,4.4.1.16 ko:K11717 ko00450,ko01100,map00450,map01100 - R03599,R11528 RC00961,RC01789,RC02313 ko00000,ko00001,ko01000 - - - Aminotran_5 QTD1_k127_3073272_12 381666.H16_B1516 1.926e-42 176.0 COG0822@1|root,COG0822@2|Bacteria,1RD5K@1224|Proteobacteria,2VQ3A@28216|Betaproteobacteria,1K7JP@119060|Burkholderiaceae 28216|Betaproteobacteria C NifU-like N terminal domain - - - ko:K04488 - - - - ko00000 - - - NifU_N QTD1_k127_3073272_9 187272.Mlg_0528 3.555e-74 253.0 COG2151@1|root,COG2151@2|Bacteria,1MZ9Y@1224|Proteobacteria,1S36X@1236|Gammaproteobacteria,1WY7B@135613|Chromatiales 135613|Chromatiales S TIGRFAM FeS assembly SUF system protein SufT - - - - - - - - - - - - FeS_assembly_P QTD1_k127_3073272_17 381666.H16_B1518 6.123e-25 110.0 COG2146@1|root,COG2146@2|Bacteria,1N8PE@1224|Proteobacteria,2VUAP@28216|Betaproteobacteria,1K8TQ@119060|Burkholderiaceae 28216|Betaproteobacteria P Rieske-like [2Fe-2S] domain - - - ko:K05710,ko:K18087 ko00360,ko00621,ko01100,ko01120,ko01220,map00360,map00621,map01100,map01120,map01220 M00543,M00545 R05261,R05262,R05263,R05264,R06782,R06783 RC00098 br01602,ko00000,ko00001,ko00002 - - - Rieske,Rieske_2 QTD1_k127_3073272_16 1232410.KI421421_gene3305 8.507e-26 117.0 COG2062@1|root,COG2062@2|Bacteria,1N0FX@1224|Proteobacteria,42TJ0@68525|delta/epsilon subdivisions,2WSKD@28221|Deltaproteobacteria 28221|Deltaproteobacteria T Histidine phosphatase superfamily (branch 1) - - - ko:K08296 - - - - ko00000,ko01000 - - - His_Phos_1 QTD1_k127_3073272_1 1121920.AUAU01000023_gene2429 2.538e-176 565.0 COG1760@1|root,COG1760@2|Bacteria,3Y420@57723|Acidobacteria 57723|Acidobacteria E serine dehydratase beta chain - - 4.3.1.17 ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 - R00220,R00590 RC00331,RC02600 ko00000,ko00001,ko01000 - - - SDH_alpha,SDH_beta QTD1_k127_3073272_18 1120988.AXWV01000025_gene1809 4.336e-22 100.0 COG1188@1|root,COG1188@2|Bacteria,1MZR6@1224|Proteobacteria,1S8VU@1236|Gammaproteobacteria,1Y4IV@135624|Aeromonadales 135624|Aeromonadales J Belongs to the HSP15 family - - - ko:K04762 - - - - ko00000,ko03110 - - - S4 QTD1_k127_3102501_4 572477.Alvin_0367 1.747e-78 265.0 COG4974@1|root,COG4974@2|Bacteria,1MVNF@1224|Proteobacteria,1RPI8@1236|Gammaproteobacteria,1WW40@135613|Chromatiales 135613|Chromatiales L TIGRFAM Tyrosine recombinase XerD xerD - - ko:K04763 - - - - ko00000,ko03036 - - - Phage_int_SAM_1,Phage_integrase QTD1_k127_3102501_6 1026882.MAMP_03062 5.024e-56 206.0 COG1651@1|root,COG1651@2|Bacteria,1RD39@1224|Proteobacteria,1S3U8@1236|Gammaproteobacteria,460JH@72273|Thiotrichales 72273|Thiotrichales O Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - 5.3.4.1 ko:K03981 - - - - ko00000,ko01000,ko02044,ko03110 3.A.7.11.1 - - DsbC_N,Thioredoxin_2 QTD1_k127_3102501_7 187272.Mlg_1486 4.907e-55 193.0 COG1146@1|root,COG1146@2|Bacteria,1RH5I@1224|Proteobacteria,1S5ZK@1236|Gammaproteobacteria,1WYW2@135613|Chromatiales 135613|Chromatiales C Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions - - - ko:K05524 - - - - ko00000 - - - DUF3470,Fer4 QTD1_k127_3102501_5 640081.Dsui_1703 1.656e-63 231.0 COG1051@1|root,COG1051@2|Bacteria,1REBW@1224|Proteobacteria,2VQ39@28216|Betaproteobacteria,2KW7A@206389|Rhodocyclales 206389|Rhodocyclales F Nudix N-terminal - - - - - - - - - - - - NUDIX,Nudix_N_2 QTD1_k127_3102501_0 1267535.KB906767_gene1756 4.127e-194 619.0 COG4993@1|root,COG4993@2|Bacteria,3Y2WV@57723|Acidobacteria,2JKWV@204432|Acidobacteriia 204432|Acidobacteriia G beta-propeller repeat - - - - - - - - - - - - PQQ QTD1_k127_3102501_9 1123253.AUBD01000005_gene128 1.227e-28 127.0 COG1595@1|root,COG1595@2|Bacteria,1QDHS@1224|Proteobacteria,1SS07@1236|Gammaproteobacteria,1X6DE@135614|Xanthomonadales 135614|Xanthomonadales K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 QTD1_k127_3102501_10 935863.AWZR01000007_gene219 4.608e-23 113.0 COG0265@1|root,COG0265@2|Bacteria,1PCJA@1224|Proteobacteria,1SXM8@1236|Gammaproteobacteria,1X6DM@135614|Xanthomonadales 135614|Xanthomonadales O PDZ domain - - - - - - - - - - - - PDZ_2 QTD1_k127_3102501_2 1123256.KB907945_gene376 6.99e-119 391.0 COG0809@1|root,COG0809@2|Bacteria,1MUH3@1224|Proteobacteria,1RMKW@1236|Gammaproteobacteria,1X3J5@135614|Xanthomonadales 135614|Xanthomonadales J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) queA GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 ko:K07568 - - - - ko00000,ko01000,ko03016 - - - Queuosine_synth QTD1_k127_3102501_1 519989.ECTPHS_05521 6.393e-158 506.0 COG0343@1|root,COG0343@2|Bacteria,1MUCA@1224|Proteobacteria,1RMY3@1236|Gammaproteobacteria,1WWQ8@135613|Chromatiales 135613|Chromatiales J Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) tgt - 2.4.2.29 ko:K00773 - - R03789,R10209 RC00063 ko00000,ko01000,ko03016 - - - TGT QTD1_k127_3102501_8 1385517.N800_10335 3.093e-31 126.0 COG1862@1|root,COG1862@2|Bacteria,1MZT2@1224|Proteobacteria,1S9NV@1236|Gammaproteobacteria,1X7J1@135614|Xanthomonadales 135614|Xanthomonadales U Preprotein translocase subunit YajC yajC - - ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 - - YajC QTD1_k127_3102501_3 1283300.ATXB01000001_gene1856 4.625e-108 368.0 COG0342@1|root,COG0342@2|Bacteria,1MV5U@1224|Proteobacteria,1RMIQ@1236|Gammaproteobacteria,1XDXB@135618|Methylococcales 135618|Methylococcales U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA secD - - ko:K03072 ko03060,ko03070,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 2.A.6.4,3.A.5.2,3.A.5.7 - - SecD-TM1,SecD_SecF,Sec_GG QTD1_k127_3131749_0 519989.ECTPHS_07326 1.316e-177 564.0 COG0210@1|root,COG0210@2|Bacteria,1MU0G@1224|Proteobacteria,1RNJI@1236|Gammaproteobacteria,1WWI3@135613|Chromatiales 135613|Chromatiales L PFAM UvrD REP helicase uvrD - 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - UvrD-helicase,UvrD_C QTD1_k127_3131749_1 748247.AZKH_2006 4.555e-78 273.0 COG0628@1|root,COG0628@2|Bacteria,1MVX7@1224|Proteobacteria,2VIIX@28216|Betaproteobacteria,2KW9W@206389|Rhodocyclales 206389|Rhodocyclales S AI-2E family transporter - - - - - - - - - - - - AI-2E_transport QTD1_k127_3131749_2 1242864.D187_001566 6.719e-16 79.0 COG1858@1|root,COG1858@2|Bacteria,1MV70@1224|Proteobacteria 1224|Proteobacteria C cytochrome c peroxidase - - 1.11.1.5 ko:K00428 - - - - ko00000,ko01000 - - - CCP_MauG,Cytochrom_C QTD1_k127_3132326_6 1234364.AMSF01000024_gene3819 0.0001273 45.0 COG2879@1|root,COG2879@2|Bacteria,1N6TY@1224|Proteobacteria,1S8VA@1236|Gammaproteobacteria,1X837@135614|Xanthomonadales 135614|Xanthomonadales S small protein - - - - - - - - - - - - Sel_put QTD1_k127_3132326_0 189753.AXAS01000083_gene8470 0.0 1091.0 COG1966@1|root,COG1966@2|Bacteria,1MWF9@1224|Proteobacteria,2TTTQ@28211|Alphaproteobacteria,3JSSR@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria T 5TM C-terminal transporter carbon starvation CstA cstA - - ko:K06200 - - - - ko00000 - - - CstA,CstA_5TM QTD1_k127_3132326_4 1101188.KI912155_gene3084 1.942e-123 408.0 COG0688@1|root,COG0688@2|Bacteria,2IBDY@201174|Actinobacteria 201174|Actinobacteria I Belongs to the phosphatidylserine decarboxylase family - - 4.1.1.65 ko:K01613 ko00564,ko01100,ko01110,map00564,map01100,map01110 M00093 R02055 RC00299 ko00000,ko00001,ko00002,ko01000 - - - PSDC,PS_Dcarbxylase QTD1_k127_3132326_1 1207055.C100_02930 2.636e-194 614.0 COG1902@1|root,COG1902@2|Bacteria,1MVE0@1224|Proteobacteria,2TQPY@28211|Alphaproteobacteria,2K127@204457|Sphingomonadales 204457|Sphingomonadales C NADH flavin oxidoreductase NADH oxidase - - - - - - - - - - - - Oxidored_FMN QTD1_k127_3132326_3 1380391.JIAS01000017_gene443 5.515e-143 488.0 COG0145@1|root,COG0145@2|Bacteria,1MU2Y@1224|Proteobacteria,2TRBN@28211|Alphaproteobacteria,2JXMW@204441|Rhodospirillales 204441|Rhodospirillales EQ Hydantoinase/oxoprolinase N-terminal region - - - - - - - - - - - - Hydant_A_N,Hydantoinase_A QTD1_k127_3132326_5 446470.Snas_4920 5.399e-78 275.0 COG2421@1|root,COG2421@2|Bacteria,2HQSF@201174|Actinobacteria 201174|Actinobacteria C Acetamidase formamidase - - - - - - - - - - - - FmdA_AmdA QTD1_k127_3132326_2 1168059.KB899087_gene245 1.664e-173 552.0 COG1233@1|root,COG1233@2|Bacteria,1MV2R@1224|Proteobacteria,2TSR0@28211|Alphaproteobacteria,3F1E7@335928|Xanthobacteraceae 28211|Alphaproteobacteria Q Flavin containing amine oxidoreductase - - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 ko:K10027 ko00906,ko01100,ko01110,map00906,map01100,map01110 - R04787,R04798,R04800,R09691,R09692 RC01214,RC02088,RC02605 ko00000,ko00001,ko01000 - - - Amino_oxidase,NAD_binding_8 QTD1_k127_31331_27 313596.RB2501_04070 2.347e-21 100.0 COG1878@1|root,COG1878@2|Bacteria,4NFXM@976|Bacteroidetes,1HWQP@117743|Flavobacteriia 976|Bacteroidetes S Metal-dependent hydrolase - - - - - - - - - - - - Cyclase QTD1_k127_31331_19 1305737.JAFX01000001_gene2856 4.397e-70 245.0 COG0662@1|root,COG0662@2|Bacteria,4NFU2@976|Bacteroidetes,47PIW@768503|Cytophagia 976|Bacteroidetes G Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate nbaC - 1.13.11.6 ko:K00452 ko00380,ko01100,map00380,map01100 M00038 R02665 RC00387 ko00000,ko00001,ko00002,ko01000 - - - 3-HAO QTD1_k127_31331_13 572477.Alvin_2150 1.394e-88 305.0 COG0639@1|root,COG0639@2|Bacteria,1MV10@1224|Proteobacteria,1RPUJ@1236|Gammaproteobacteria,1WVWS@135613|Chromatiales 135613|Chromatiales T Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP apaH - 3.6.1.41 ko:K01525 ko00230,map00230 - R00125 RC00002 ko00000,ko00001,ko01000 - - - Metallophos QTD1_k127_31331_22 395493.BegalDRAFT_1170 2.667e-53 190.0 COG2967@1|root,COG2967@2|Bacteria,1MZ2Z@1224|Proteobacteria,1S8SE@1236|Gammaproteobacteria,46106@72273|Thiotrichales 72273|Thiotrichales P ApaG domain apaG - - ko:K06195 - - - - ko00000 - - - DUF525 QTD1_k127_31331_26 686340.Metal_3682 5.336e-26 114.0 COG0589@1|root,COG0589@2|Bacteria,1RHE6@1224|Proteobacteria,1TI38@1236|Gammaproteobacteria,1XGEC@135618|Methylococcales 135618|Methylococcales T Universal stress protein family - - - - - - - - - - - - Usp QTD1_k127_31331_17 1415779.JOMH01000001_gene201 2.037e-71 250.0 COG0030@1|root,COG0030@2|Bacteria,1MVNU@1224|Proteobacteria,1RMHW@1236|Gammaproteobacteria,1X38K@135614|Xanthomonadales 135614|Xanthomonadales J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits ksgA GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 ko:K02528 - - R10716 RC00003,RC03257 ko00000,ko01000,ko03009 - - - RrnaAD QTD1_k127_31331_9 187272.Mlg_0201 2.487e-109 363.0 COG1995@1|root,COG1995@2|Bacteria,1MX5W@1224|Proteobacteria,1RNZV@1236|Gammaproteobacteria,1WWTH@135613|Chromatiales 135613|Chromatiales H Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) pdxA - 1.1.1.262 ko:K00097 ko00750,ko01100,map00750,map01100 M00124 R05681,R05837,R07406 RC00089,RC00675,RC01475 ko00000,ko00001,ko00002,ko01000 - - - PdxA QTD1_k127_31331_7 323261.Noc_1723 4.044e-116 388.0 COG0760@1|root,COG0760@2|Bacteria,1MVB3@1224|Proteobacteria,1RMWU@1236|Gammaproteobacteria,1WVWN@135613|Chromatiales 135613|Chromatiales M Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation surA - 5.2.1.8 ko:K03771 - - - - ko00000,ko01000,ko03110 - - - Rotamase,SurA_N QTD1_k127_31331_4 472759.Nhal_2084 6.942e-135 460.0 COG1452@1|root,COG1452@2|Bacteria,1MUJC@1224|Proteobacteria,1RQEX@1236|Gammaproteobacteria,1WWF6@135613|Chromatiales 135613|Chromatiales M Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane lptD - - ko:K04744 - - - - ko00000,ko02000 1.B.42.1 - - OstA,OstA_C QTD1_k127_31331_12 1384056.N787_12205 3.347e-98 338.0 COG3178@1|root,COG3178@2|Bacteria,1MXCH@1224|Proteobacteria,1RQ1Q@1236|Gammaproteobacteria,1X4P2@135614|Xanthomonadales 135614|Xanthomonadales S Phosphotransferase - - 2.7.1.221 ko:K07102 ko00520,ko01100,map00520,map01100 - R08968,R11024 RC00002,RC00078 ko00000,ko00001,ko01000 - - - APH QTD1_k127_31331_18 572477.Alvin_2540 5.211e-71 256.0 COG1208@1|root,COG1208@2|Bacteria,1R9ZD@1224|Proteobacteria,1S23A@1236|Gammaproteobacteria,1WWYC@135613|Chromatiales 135613|Chromatiales JM PFAM Nucleotidyl transferase - - 2.7.7.99 ko:K00992 ko00520,ko01100,map00520,map01100 - R11025 RC00002 ko00000,ko00001,ko01000 - - - NTP_transferase QTD1_k127_31331_2 1260251.SPISAL_01535 1.894e-145 469.0 COG0320@1|root,COG0320@2|Bacteria,1MVRD@1224|Proteobacteria,1RMAT@1236|Gammaproteobacteria,1WXEN@135613|Chromatiales 135613|Chromatiales H Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives lipA - 2.8.1.8 ko:K03644 ko00785,ko01100,map00785,map01100 - R07767,R07768 RC01978 ko00000,ko00001,ko01000 - - - LIAS_N,Radical_SAM QTD1_k127_31331_15 1442599.JAAN01000035_gene655 3.02e-80 273.0 COG0321@1|root,COG0321@2|Bacteria,1MU6A@1224|Proteobacteria,1RMXQ@1236|Gammaproteobacteria,1X4H1@135614|Xanthomonadales 135614|Xanthomonadales H Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate lipB GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 ko:K03801 ko00785,ko01100,map00785,map01100 - R07766,R07769 RC00039,RC00992,RC02867 ko00000,ko00001,ko01000 - - - BPL_LplA_LipB QTD1_k127_31331_3 1304883.KI912532_gene904 3.225e-144 473.0 COG1613@1|root,COG1613@2|Bacteria,1MUAU@1224|Proteobacteria,2VIQZ@28216|Betaproteobacteria,2KV40@206389|Rhodocyclales 206389|Rhodocyclales P COG1613 ABC-type sulfate transport system, periplasmic component - - - ko:K02048 ko00920,ko02010,map00920,map02010 M00185 - - ko00000,ko00001,ko00002,ko02000 3.A.1.6.1,3.A.1.6.3 - - SBP_bac_11 QTD1_k127_31331_23 471854.Dfer_1118 9.978e-38 153.0 arCOG09454@1|root,30G4A@2|Bacteria,4NPSB@976|Bacteroidetes,47Q9D@768503|Cytophagia 976|Bacteroidetes - - - - - - - - - - - - - - - QTD1_k127_31331_10 1449063.JMLS01000003_gene1855 2.723e-108 367.0 COG4208@1|root,COG4208@2|Bacteria,1TS3N@1239|Firmicutes,4H9XE@91061|Bacilli,26U4E@186822|Paenibacillaceae 91061|Bacilli P Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import cysW - - ko:K02047 ko00920,ko02010,map00920,map02010 M00185 - - ko00000,ko00001,ko00002,ko02000 3.A.1.6.1,3.A.1.6.3 - - BPD_transp_1 QTD1_k127_31331_11 452637.Oter_2063 6.024e-107 366.0 COG0555@1|root,COG0555@2|Bacteria,46SGI@74201|Verrucomicrobia,3K7R0@414999|Opitutae 414999|Opitutae P Binding-protein-dependent transport system inner membrane component - - - ko:K02046 ko00920,ko02010,map00920,map02010 M00185 - - ko00000,ko00001,ko00002,ko02000 3.A.1.6.1,3.A.1.6.3 - - BPD_transp_1 QTD1_k127_31331_6 1128421.JAGA01000001_gene2449 3.985e-118 401.0 COG3842@1|root,COG3842@2|Bacteria 2|Bacteria P ATPase activity cysA - 3.6.3.25 ko:K02045 ko00920,ko02010,map00920,map02010 M00185 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.6.1,3.A.1.6.3 - - ABC_tran,TOBE_2,TOBE_3 QTD1_k127_31331_1 1121013.P873_08505 6.195e-164 526.0 COG1252@1|root,COG1252@2|Bacteria,1MX96@1224|Proteobacteria,1RM9I@1236|Gammaproteobacteria,1X3HK@135614|Xanthomonadales 135614|Xanthomonadales C NADH dehydrogenase, FAD-containing subunit ndh - 1.6.99.3 ko:K03885 ko00190,map00190 - - - ko00000,ko00001,ko01000 - - - Pyr_redox_2 QTD1_k127_31331_14 519989.ECTPHS_02491 5.439e-82 284.0 COG0115@1|root,COG0115@2|Bacteria,1MVAT@1224|Proteobacteria,1RPU0@1236|Gammaproteobacteria,1WX40@135613|Chromatiales 135613|Chromatiales EH PFAM Aminotransferase, class IV - - 2.6.1.21 ko:K00824 ko00310,ko00330,ko00360,ko00472,ko00473,ko01100,map00310,map00330,map00360,map00472,map00473,map01100 - R01148,R01582,R02459,R02851,R02924,R05053 RC00006,RC00008,RC00025 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_4 QTD1_k127_31331_8 243233.MCA0105 1.016e-114 381.0 COG1686@1|root,COG1686@2|Bacteria,1MUU7@1224|Proteobacteria,1RMJA@1236|Gammaproteobacteria,1XE3C@135618|Methylococcales 135618|Methylococcales M Belongs to the peptidase S11 family - - 3.4.16.4 ko:K07258 ko00550,ko01100,map00550,map01100 - - - ko00000,ko00001,ko01000,ko01002,ko01011 - - - PBP5_C,Peptidase_S11 QTD1_k127_31331_20 396588.Tgr7_2708 3.931e-66 247.0 COG0797@1|root,COG3087@1|root,COG0797@2|Bacteria,COG3087@2|Bacteria,1MZ8S@1224|Proteobacteria,1RMCG@1236|Gammaproteobacteria,1WW9X@135613|Chromatiales 135613|Chromatiales M Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides rlpA - - ko:K03642 - - - - ko00000 - - - DPBB_1,SPOR QTD1_k127_31331_16 1265313.HRUBRA_02826 1.443e-78 276.0 COG2951@1|root,COG2951@2|Bacteria,1MUZ3@1224|Proteobacteria,1RMQ6@1236|Gammaproteobacteria,1J4FD@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria M COG2951 Membrane-bound lytic murein transglycosylase B mltB - - ko:K08305 - - - - ko00000,ko01000,ko01011 - GH103 - SLT_2 QTD1_k127_31331_5 765914.ThisiDRAFT_1433 3.664e-121 409.0 COG0772@1|root,COG0772@2|Bacteria,1MUK3@1224|Proteobacteria,1RMEJ@1236|Gammaproteobacteria,1WWAV@135613|Chromatiales 135613|Chromatiales M Peptidoglycan polymerase that is essential for cell wall elongation mrdB - - ko:K05837 - - - - ko00000,ko03036 - - - FTSW_RODA_SPOVE QTD1_k127_31331_0 1283300.ATXB01000002_gene2819 9.285e-172 567.0 COG0768@1|root,COG0768@2|Bacteria,1MV8C@1224|Proteobacteria,1RN9H@1236|Gammaproteobacteria,1XDPF@135618|Methylococcales 135618|Methylococcales M Catalyzes cross-linking of the peptidoglycan cell wall mrdA - 3.4.16.4 ko:K05515 ko00550,ko01501,map00550,map01501 - - - ko00000,ko00001,ko01000,ko01011 - - - PBP_dimer,Transpeptidase QTD1_k127_31331_25 519989.ECTPHS_09243 4.134e-28 123.0 COG2891@1|root,COG2891@2|Bacteria,1RER7@1224|Proteobacteria,1S8VI@1236|Gammaproteobacteria,1WYH2@135613|Chromatiales 135613|Chromatiales M Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins - - - ko:K03571 - - - - ko00000,ko03036 9.B.157.1 - - MreD QTD1_k127_31331_21 745411.B3C1_18266 3.051e-56 211.0 COG1792@1|root,COG1792@2|Bacteria,1N8ZS@1224|Proteobacteria,1RMK4@1236|Gammaproteobacteria,1J4IH@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria M Cell shape-determining protein mreC GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007163,GO:0008150,GO:0008360,GO:0009987,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0043621,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944,GO:0071963 - ko:K03570 - - - - ko00000,ko03036 9.B.157.1 - - MreC QTD1_k127_31331_24 765914.ThisiDRAFT_1913 3.578e-36 138.0 COG1077@1|root,COG1077@2|Bacteria,1MUMW@1224|Proteobacteria,1RN82@1236|Gammaproteobacteria,1WW91@135613|Chromatiales 135613|Chromatiales D TIGRFAM Cell shape determining protein MreB Mrl - - - ko:K03569 - - - - ko00000,ko02048,ko03036,ko04812 1.A.33.1,9.B.157.1 - - MreB_Mbl QTD1_k127_3154802_2 2340.JV46_23410 2.409e-17 86.0 COG0204@1|root,COG0318@1|root,COG0204@2|Bacteria,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,1T1II@1236|Gammaproteobacteria,1J8WI@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria IQ AMP-binding enzyme - - - - - - - - - - - - AMP-binding,AMP-binding_C,Acyltransferase,Aminotran_1_2,NAD_binding_4,PP-binding,Thioesterase QTD1_k127_3154802_0 1123253.AUBD01000008_gene518 0.0 1455.0 COG1703@1|root,COG1884@1|root,COG2185@1|root,COG1703@2|Bacteria,COG1884@2|Bacteria,COG2185@2|Bacteria,1MUXX@1224|Proteobacteria,1RSHX@1236|Gammaproteobacteria,1X3T3@135614|Xanthomonadales 135614|Xanthomonadales EI Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly icmF - 5.4.99.13 ko:K11942 - - - - ko00000,ko01000 - - - ArgK,B12-binding,MM_CoA_mutase QTD1_k127_3154802_1 78245.Xaut_4073 7.334e-53 200.0 COG1309@1|root,COG1309@2|Bacteria,1MY9K@1224|Proteobacteria,2U3PH@28211|Alphaproteobacteria 28211|Alphaproteobacteria K Transcriptional regulator - - - - - - - - - - - - TetR_N QTD1_k127_3154802_3 85643.Tmz1t_0732 1.024e-14 78.0 COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,2VH4C@28216|Betaproteobacteria,2KV1Y@206389|Rhodocyclales 206389|Rhodocyclales I Belongs to the thiolase family - - 2.3.1.9 ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 M00088,M00095,M00373,M00374,M00375 R00238,R01177 RC00004,RC00326 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Thiolase_C,Thiolase_N QTD1_k127_3207994_10 1120999.JONM01000001_gene1307 1.204e-06 51.0 COG1752@1|root,COG1752@2|Bacteria,1PIHH@1224|Proteobacteria,2VHKX@28216|Betaproteobacteria,2KPMC@206351|Neisseriales 206351|Neisseriales S Patatin-like phospholipase - - - ko:K07001 - - - - ko00000 - - - Patatin QTD1_k127_3207994_4 1122137.AQXF01000005_gene1022 3.206e-87 302.0 COG2850@1|root,COG2850@2|Bacteria 2|Bacteria P peptidyl-arginine hydroxylation - - - - - - - - - - - - Cupin_4 QTD1_k127_3207994_3 697282.Mettu_2485 6.973e-90 305.0 COG1660@1|root,COG1660@2|Bacteria,1MVX6@1224|Proteobacteria,1RNJX@1236|Gammaproteobacteria,1XE9S@135618|Methylococcales 135618|Methylococcales S Displays ATPase and GTPase activities - - - ko:K06958 - - - - ko00000,ko03019 - - - ATP_bind_2 QTD1_k127_3207994_7 396588.Tgr7_0725 8.739e-34 133.0 COG1544@1|root,COG1544@2|Bacteria,1MZHW@1224|Proteobacteria,1S8U1@1236|Gammaproteobacteria,1WYWY@135613|Chromatiales 135613|Chromatiales J Sigma 54 modulation protein - - - ko:K05808 - - - - ko00000,ko03009 - - - Ribosomal_S30AE QTD1_k127_3207994_0 1266914.ATUK01000015_gene919 5.583e-132 436.0 COG1508@1|root,COG1508@2|Bacteria,1MW4V@1224|Proteobacteria,1RMY0@1236|Gammaproteobacteria,1WVZD@135613|Chromatiales 135613|Chromatiales K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released - - - ko:K03092 ko02020,ko05111,map02020,map05111 - - - ko00000,ko00001,ko03021 - - - Sigma54_AID,Sigma54_CBD,Sigma54_DBD QTD1_k127_3207994_2 1288826.MSNKSG1_09013 3.138e-104 344.0 COG1137@1|root,COG1137@2|Bacteria,1MU8M@1224|Proteobacteria,1RPW1@1236|Gammaproteobacteria,464GB@72275|Alteromonadaceae 1236|Gammaproteobacteria S COG1137 ABC-type (unclassified) transport system, ATPase component lptB GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - ko:K06861 ko02010,map02010 M00320 - - ko00000,ko00001,ko00002,ko01000,ko02000 1.B.42.1 - - ABC_tran,BCA_ABC_TP_C QTD1_k127_3207994_9 203122.Sde_3177 5.133e-08 63.0 COG1934@1|root,COG1934@2|Bacteria,1N776@1224|Proteobacteria,1RPM7@1236|Gammaproteobacteria,468RP@72275|Alteromonadaceae 1236|Gammaproteobacteria S Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm lptA GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0009279,GO:0010876,GO:0015920,GO:0016020,GO:0017089,GO:0019867,GO:0030288,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0042597,GO:0042802,GO:0044462,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:1901264 - ko:K09774 - - - - ko00000,ko02000 1.B.42.1 - iB21_1397.B21_03016,iECBD_1354.ECBD_0542,iECB_1328.ECB_03065,iECD_1391.ECD_03065 OstA QTD1_k127_3207994_11 768066.HELO_1926 1.659e-05 55.0 COG3117@1|root,COG3117@2|Bacteria,1NGCC@1224|Proteobacteria,1SGDP@1236|Gammaproteobacteria,1XMNP@135619|Oceanospirillales 135619|Oceanospirillales S Lipopolysaccharide-assembly, LptC-related lptC - - ko:K11719 - - - - ko00000,ko02000 1.B.42.1 - - LptC QTD1_k127_3207994_6 227377.CBU_0749 5.602e-43 165.0 COG1778@1|root,COG1778@2|Bacteria,1RH85@1224|Proteobacteria,1S6D0@1236|Gammaproteobacteria,1JCF2@118969|Legionellales 118969|Legionellales S Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate kdsC - 3.1.3.45 ko:K03270 ko00540,ko01100,map00540,map01100 M00063 R03350 RC00017 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Hydrolase_3 QTD1_k127_3207994_1 349124.Hhal_2121 3.685e-125 412.0 COG0517@1|root,COG0794@1|root,COG0517@2|Bacteria,COG0794@2|Bacteria,1MUXD@1224|Proteobacteria,1RMT9@1236|Gammaproteobacteria,1WWFJ@135613|Chromatiales 135613|Chromatiales M Arabinose 5-phosphate isomerase - - 5.3.1.13 ko:K06041 ko00540,ko01100,map00540,map01100 M00063 R01530 RC00541 ko00000,ko00001,ko00002,ko01000,ko01005 - - - CBS,SIS QTD1_k127_3207994_8 1121013.P873_02690 1.536e-18 94.0 COG5007@1|root,COG5007@2|Bacteria,1R3MK@1224|Proteobacteria,1SE4M@1236|Gammaproteobacteria,1X7EE@135614|Xanthomonadales 135614|Xanthomonadales K Belongs to the BolA IbaG family SN15_13775 - - - - - - - - - - - BolA QTD1_k127_3207994_5 519989.ECTPHS_01744 6.971e-67 233.0 COG0766@1|root,COG0766@2|Bacteria,1MUH7@1224|Proteobacteria,1RN91@1236|Gammaproteobacteria,1WXB6@135613|Chromatiales 135613|Chromatiales M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine murA - 2.5.1.7 ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 - R00660 RC00350 ko00000,ko00001,ko01000,ko01011 - - - EPSP_synthase QTD1_k127_3240817_1 1380394.JADL01000005_gene5432 7.549e-94 319.0 COG0277@1|root,COG0277@2|Bacteria,1MUPW@1224|Proteobacteria,2TUNK@28211|Alphaproteobacteria,2JRV4@204441|Rhodospirillales 204441|Rhodospirillales C Berberine and berberine like - - - - - - - - - - - - BBE,FAD_binding_4 QTD1_k127_3240817_6 697282.Mettu_1555 1.767e-07 58.0 2EFUG@1|root,339KM@2|Bacteria,1NGQQ@1224|Proteobacteria,1SHZI@1236|Gammaproteobacteria,1XFQZ@135618|Methylococcales 135618|Methylococcales S Alanine-zipper, major outer membrane lipoprotein - - - - - - - - - - - - Alanine_zipper QTD1_k127_3240817_2 382245.ASA_4206 1.214e-76 261.0 COG1974@1|root,COG1974@2|Bacteria,1MW80@1224|Proteobacteria,1RMXF@1236|Gammaproteobacteria,1Y45U@135624|Aeromonadales 135624|Aeromonadales K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair lexA - 3.4.21.88 ko:K01356 - M00729 - - ko00000,ko00002,ko01000,ko01002,ko03400 - - - LexA_DNA_bind,Peptidase_S24 QTD1_k127_3240817_4 292415.Tbd_0830 2.067e-45 171.0 COG4544@1|root,COG4544@2|Bacteria,1MZQU@1224|Proteobacteria,2VUGI@28216|Betaproteobacteria 28216|Betaproteobacteria S Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division - - - ko:K13053,ko:K14160 - - - - ko00000,ko03036,ko03400 - - - SulA QTD1_k127_3240817_3 187272.Mlg_1094 1.043e-70 262.0 COG0389@1|root,COG0389@2|Bacteria,1MU5X@1224|Proteobacteria,1S28B@1236|Gammaproteobacteria,1WZ7G@135613|Chromatiales 135613|Chromatiales L Nucleotidyltransferase DNA polymerase involved in DNA repair - - - ko:K14161 - - - - ko00000,ko03400 - - - IMS QTD1_k127_3240817_0 292415.Tbd_0828 0.0 1247.0 COG0587@1|root,COG0587@2|Bacteria,1MUIF@1224|Proteobacteria,2VH3F@28216|Betaproteobacteria,1KS3D@119069|Hydrogenophilales 28216|Betaproteobacteria L Bacterial DNA polymerase III alpha subunit - - 2.7.7.7 ko:K14162 - - - - ko00000,ko01000,ko03400 - - - DNA_pol3_alpha,HHH_6,PHP QTD1_k127_3240817_5 765914.ThisiDRAFT_0839 1.977e-39 149.0 COG1459@1|root,COG1459@2|Bacteria,1MV4U@1224|Proteobacteria,1RQ86@1236|Gammaproteobacteria,1WXA3@135613|Chromatiales 135613|Chromatiales U General secretion pathway protein F - - - ko:K02455 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - T2SSF QTD1_k127_3243081_4 243233.MCA1804 2.065e-41 155.0 COG0825@1|root,COG0825@2|Bacteria,1MURN@1224|Proteobacteria,1RNN8@1236|Gammaproteobacteria,1XE5H@135618|Methylococcales 135618|Methylococcales I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA accA - 2.1.3.15,6.4.1.2 ko:K01962 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04386 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 - - - ACCA QTD1_k127_3243081_3 472759.Nhal_2676 1.08e-77 279.0 COG0037@1|root,COG0037@2|Bacteria,1MU85@1224|Proteobacteria,1RN14@1236|Gammaproteobacteria,1WWPM@135613|Chromatiales 135613|Chromatiales D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine tilS - 6.3.4.19 ko:K04075 - - R09597 RC02633,RC02634 ko00000,ko01000,ko03016 - - - ATP_bind_3,TilS,TilS_C QTD1_k127_3243081_0 187272.Mlg_1841 6.737e-247 776.0 COG0504@1|root,COG0504@2|Bacteria,1MUIT@1224|Proteobacteria,1RM92@1236|Gammaproteobacteria,1WWJ8@135613|Chromatiales 135613|Chromatiales F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates pyrG - 6.3.4.2 ko:K01937 ko00240,ko01100,map00240,map01100 M00052 R00571,R00573 RC00010,RC00074 ko00000,ko00001,ko00002,ko01000 - - - CTP_synth_N,GATase QTD1_k127_3243081_1 765911.Thivi_3970 1.051e-137 443.0 COG2877@1|root,COG2877@2|Bacteria,1MV91@1224|Proteobacteria,1RMGQ@1236|Gammaproteobacteria,1WWZU@135613|Chromatiales 135613|Chromatiales M 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase kdsA - 2.5.1.55 ko:K01627 ko00540,ko01100,map00540,map01100 M00063 R03254 RC00435 ko00000,ko00001,ko00002,ko01000,ko01005 - - - DAHP_synth_1 QTD1_k127_3243081_2 1122604.JONR01000019_gene1192 1.112e-135 453.0 COG0148@1|root,COG0148@2|Bacteria,1MU1N@1224|Proteobacteria,1RNQA@1236|Gammaproteobacteria,1X2YM@135614|Xanthomonadales 135614|Xanthomonadales G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis eno - 4.2.1.11 ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 M00001,M00002,M00003,M00346,M00394 R00658 RC00349 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 - - - Enolase_C,Enolase_N QTD1_k127_3255838_25 69395.JQLZ01000003_gene450 2.566e-09 59.0 COG1629@1|root,COG1629@2|Bacteria,1QUTW@1224|Proteobacteria,2TW7F@28211|Alphaproteobacteria,2KFR5@204458|Caulobacterales 204458|Caulobacterales P receptor - - - - - - - - - - - - Plug,TonB_dep_Rec QTD1_k127_3255838_4 1336235.JAEG01000006_gene924 1.199e-157 509.0 COG0161@1|root,COG0161@2|Bacteria,1MU2N@1224|Proteobacteria,2TQND@28211|Alphaproteobacteria,4B97F@82115|Rhizobiaceae 28211|Alphaproteobacteria H Aminotransferase class-III - - - - - - - - - - - - Aminotran_3 QTD1_k127_3255838_8 1079460.ATTQ01000060_gene896 1.071e-111 368.0 COG3246@1|root,COG3246@2|Bacteria,1MZTP@1224|Proteobacteria,2TQKN@28211|Alphaproteobacteria,4B9QZ@82115|Rhizobiaceae 28211|Alphaproteobacteria S beta-keto acid cleavage enzyme - - - - - - - - - - - - BKACE QTD1_k127_3255838_9 2074.JNYD01000016_gene4246 6.358e-111 367.0 COG0673@1|root,COG0673@2|Bacteria,2GJCY@201174|Actinobacteria,4E9C0@85010|Pseudonocardiales 201174|Actinobacteria S Oxidoreductase family, C-terminal alpha/beta domain idhA - 1.1.1.18,1.1.1.369 ko:K00010 ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130 - R01183,R09951 RC00182 ko00000,ko00001,ko01000 - - - GFO_IDH_MocA,GFO_IDH_MocA_C QTD1_k127_3255838_13 864069.MicloDRAFT_00035720 1.976e-96 324.0 COG3718@1|root,COG3718@2|Bacteria,1MWGD@1224|Proteobacteria,2TUJZ@28211|Alphaproteobacteria,1JXNB@119045|Methylobacteriaceae 28211|Alphaproteobacteria G KduI/IolB family iolB - 5.3.1.30 ko:K03337 ko00562,ko01100,ko01120,map00562,map01100,map01120 - R08503 RC00541 ko00000,ko00001,ko01000 - - - KduI QTD1_k127_3255838_7 1336243.JAEA01000001_gene1931 1.468e-118 387.0 COG1082@1|root,COG1082@2|Bacteria,1MUQ0@1224|Proteobacteria,2TRXA@28211|Alphaproteobacteria,1JUPG@119045|Methylobacteriaceae 28211|Alphaproteobacteria G Xylose isomerase-like TIM barrel iolE - 4.2.1.44 ko:K03335 ko00562,ko01100,ko01120,map00562,map01100,map01120 - R02782,R05659 RC00782,RC01448 ko00000,ko00001,ko01000 - - - AP_endonuc_2 QTD1_k127_3255838_0 1411123.JQNH01000001_gene664 1.764e-261 818.0 COG3962@1|root,COG3962@2|Bacteria,1MW0P@1224|Proteobacteria,2TR12@28211|Alphaproteobacteria 28211|Alphaproteobacteria E Belongs to the TPP enzyme family iolD - 3.7.1.22 ko:K03336 ko00562,ko01100,ko01120,map00562,map01100,map01120 - R08603 RC02331 ko00000,ko00001,ko01000 - - - TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N QTD1_k127_3255838_1 864069.MicloDRAFT_00035750 7.009e-212 676.0 COG0524@1|root,COG3892@1|root,COG0524@2|Bacteria,COG3892@2|Bacteria,1MV6I@1224|Proteobacteria,2TTWN@28211|Alphaproteobacteria,1JS68@119045|Methylobacteriaceae 28211|Alphaproteobacteria G Uncharacterized protein conserved in bacteria (DUF2090) iolC - 2.7.1.92 ko:K03338 ko00562,ko01100,ko01120,map00562,map01100,map01120 - R05661 RC00002,RC00017 ko00000,ko00001,ko01000 - - - DUF2090,PfkB QTD1_k127_3255838_14 75379.Tint_0015 1.218e-87 302.0 COG1230@1|root,COG1230@2|Bacteria,1MVQB@1224|Proteobacteria,2VMHH@28216|Betaproteobacteria,1KKKA@119065|unclassified Burkholderiales 28216|Betaproteobacteria P TIGRFAM cation diffusion facilitator family transporter - - - ko:K16264 - - - - ko00000,ko02000 2.A.4.1 - - Cation_efflux QTD1_k127_3255838_17 1380394.JADL01000001_gene2615 2.399e-72 253.0 COG0235@1|root,COG0235@2|Bacteria,1MWP9@1224|Proteobacteria,2TRMV@28211|Alphaproteobacteria,2JW37@204441|Rhodospirillales 204441|Rhodospirillales G Class II Aldolase and Adducin N-terminal domain - - - - - - - - - - - - Aldolase_II QTD1_k127_3255838_15 234267.Acid_0673 1.927e-84 305.0 COG2271@1|root,COG2271@2|Bacteria,3Y3W5@57723|Acidobacteria 57723|Acidobacteria G Major Facilitator Superfamily - - - - - - - - - - - - MFS_1 QTD1_k127_3255838_18 1267534.KB906756_gene36 1.426e-69 243.0 COG0177@1|root,COG0177@2|Bacteria,3Y8R4@57723|Acidobacteria 57723|Acidobacteria L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate - - - - - - - - - - - - - QTD1_k127_3255838_22 1331060.RLDS_01755 4.15e-32 130.0 COG3686@1|root,COG3686@2|Bacteria,1RAEH@1224|Proteobacteria,2U5JJ@28211|Alphaproteobacteria 28211|Alphaproteobacteria S MAPEG family MA20_30600 - - - - - - - - - - - MAPEG QTD1_k127_3255838_12 1112212.JH584235_gene1623 8.612e-101 331.0 COG5514@1|root,COG5514@2|Bacteria,1MX90@1224|Proteobacteria,2TUIX@28211|Alphaproteobacteria,2K15G@204457|Sphingomonadales 204457|Sphingomonadales S Domain of unknown function (DUF1794) - - - - - - - - - - - - DUF1794 QTD1_k127_3255838_21 1500890.JQNL01000001_gene1686 3.222e-53 198.0 COG3595@1|root,COG3595@2|Bacteria,1N10U@1224|Proteobacteria,1S8T2@1236|Gammaproteobacteria,1X5XN@135614|Xanthomonadales 135614|Xanthomonadales - - - - - - - - - - - - - - - QTD1_k127_3255838_10 1297570.MESS4_550057 2.895e-105 369.0 COG3491@1|root,COG3491@2|Bacteria,1R7CS@1224|Proteobacteria,2TUIU@28211|Alphaproteobacteria 28211|Alphaproteobacteria C Belongs to the iron ascorbate-dependent oxidoreductase family - - - - - - - - - - - - 2OG-FeII_Oxy,DIOX_N QTD1_k127_3255838_3 1379270.AUXF01000002_gene1717 8.63e-160 538.0 COG5001@1|root,COG5001@2|Bacteria,1ZT12@142182|Gemmatimonadetes 142182|Gemmatimonadetes T Putative diguanylate phosphodiesterase - - - - - - - - - - - - EAL,GGDEF,PAS QTD1_k127_3255838_16 1131813.AQVT01000001_gene2053 2.33e-75 264.0 COG0656@1|root,COG0656@2|Bacteria,1MX6S@1224|Proteobacteria,2U0AU@28211|Alphaproteobacteria,1JS2Q@119045|Methylobacteriaceae 28211|Alphaproteobacteria S PFAM aldo keto reductase - - - - - - - - - - - - Aldo_ket_red QTD1_k127_3255838_23 1366050.N234_12700 2.584e-28 119.0 COG3631@1|root,COG3631@2|Bacteria,1NVCX@1224|Proteobacteria,2W2B6@28216|Betaproteobacteria,1K7E1@119060|Burkholderiaceae 28216|Betaproteobacteria S SnoaL-like domain - - - - - - - - - - - - SnoaL_2 QTD1_k127_3255838_20 1380394.JADL01000010_gene4119 1.228e-59 213.0 COG3193@1|root,COG3193@2|Bacteria,1RGUD@1224|Proteobacteria,2UGI0@28211|Alphaproteobacteria,2JZSK@204441|Rhodospirillales 204441|Rhodospirillales S Haem-degrading - - - - - - - - - - - - Haem_degrading QTD1_k127_3255838_5 1395571.TMS3_0108235 3.274e-140 455.0 COG2084@1|root,COG2084@2|Bacteria,1PU4S@1224|Proteobacteria,1RTNW@1236|Gammaproteobacteria 1236|Gammaproteobacteria I 3-Hydroxyisobutyrate Dehydrogenase - - 1.1.1.31 ko:K00020 ko00280,ko01100,map00280,map01100 - R05066 RC00099 ko00000,ko00001,ko01000 - - - NAD_binding_11,NAD_binding_2 QTD1_k127_3255838_2 1218074.BAXZ01000007_gene2063 3.841e-194 616.0 COG1457@1|root,COG1457@2|Bacteria,1QYVS@1224|Proteobacteria,2VN4H@28216|Betaproteobacteria,1K1JN@119060|Burkholderiaceae 28216|Betaproteobacteria F Belongs to the purine-cytosine permease (2.A.39) family - - - ko:K03457 - - - - ko00000 2.A.39 - - Transp_cyt_pur QTD1_k127_3255838_24 702113.PP1Y_Mpl824 9.679e-23 106.0 COG1309@1|root,COG1309@2|Bacteria,1N9NV@1224|Proteobacteria,2UN7B@28211|Alphaproteobacteria,2K7NV@204457|Sphingomonadales 204457|Sphingomonadales K BetI-type transcriptional repressor, C-terminal - - - - - - - - - - - - TetR_C_6,TetR_N QTD1_k127_3255838_19 1384054.N790_01970 1.98e-60 215.0 COG3917@1|root,COG3917@2|Bacteria,1RJFB@1224|Proteobacteria,1S772@1236|Gammaproteobacteria,1X6G4@135614|Xanthomonadales 135614|Xanthomonadales Q DSBA-like thioredoxin domain - - - - - - - - - - - - DSBA QTD1_k127_3255838_6 160488.PP_2476 1.47e-139 452.0 COG2130@1|root,COG2130@2|Bacteria,1MUC2@1224|Proteobacteria,1RNGM@1236|Gammaproteobacteria,1YY57@136845|Pseudomonas putida group 1236|Gammaproteobacteria S Alcohol dehydrogenase yncB - - ko:K07119 - - - - ko00000 - - - ADH_N_2,ADH_zinc_N QTD1_k127_3255838_11 450851.PHZ_c2883 2.696e-102 338.0 COG1028@1|root,COG1028@2|Bacteria,1MUSQ@1224|Proteobacteria,2TTJC@28211|Alphaproteobacteria,2KFGY@204458|Caulobacterales 204458|Caulobacterales IQ Enoyl-(Acyl carrier protein) reductase - - - ko:K13775 ko00281,map00281 - R08087,R08096,R10125,R10126 RC00080,RC00087 ko00000,ko00001 - - - adh_short QTD1_k127_3275741_5 45157.CMN129CT 7.32e-21 101.0 COG0460@1|root,2QQBK@2759|Eukaryota 2759|Eukaryota E homoserine dehydrogenase activity - - 1.1.1.3,2.7.2.4 ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00017,M00018,M00526,M00527 R00480,R01773,R01775 RC00002,RC00043,RC00087 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase,ACT,ACT_7,Homoserine_dh,NAD_binding_3,Orai-1 QTD1_k127_3275741_3 697282.Mettu_4100 1.364e-37 149.0 COG2068@1|root,COG2068@2|Bacteria,1MW0X@1224|Proteobacteria,1SEGZ@1236|Gammaproteobacteria,1XGGS@135618|Methylococcales 135618|Methylococcales S 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase - - - - - - - - - - - - NTP_transf_3 QTD1_k127_3275741_2 323848.Nmul_A2263 1.153e-50 197.0 COG0251@1|root,COG0251@2|Bacteria,1RH61@1224|Proteobacteria,2VSD8@28216|Betaproteobacteria,3736B@32003|Nitrosomonadales 28216|Betaproteobacteria J Endoribonuclease L-PSP - - - - - - - - - - - - Ribonuc_L-PSP QTD1_k127_3275741_0 1532557.JL37_25285 1.053e-77 271.0 COG2301@1|root,COG2301@2|Bacteria,1MW0A@1224|Proteobacteria,2WGAR@28216|Betaproteobacteria,3T9GX@506|Alcaligenaceae 28216|Betaproteobacteria H Belongs to the HpcH HpaI aldolase family - - 4.1.3.34 ko:K01644 ko02020,map02020 - R00362 RC00067,RC01118 ko00000,ko00001,ko01000 - - - HpcH_HpaI QTD1_k127_3275741_1 936455.KI421499_gene748 8.938e-60 211.0 COG2030@1|root,COG2030@2|Bacteria,1MW4N@1224|Proteobacteria,2TQQ2@28211|Alphaproteobacteria,3JXUB@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria I N-terminal half of MaoC dehydratase - - - - - - - - - - - - MaoC_dehydratas QTD1_k127_3275741_4 62928.azo0432 1.372e-25 110.0 COG0155@1|root,COG0155@2|Bacteria,1MVVB@1224|Proteobacteria,2VIYX@28216|Betaproteobacteria,2KU69@206389|Rhodocyclales 206389|Rhodocyclales C Sulfite reductase cysI - 1.8.1.2 ko:K00381 ko00920,ko01100,ko01120,map00920,map01100,map01120 M00176 R00858 RC00065 ko00000,ko00001,ko00002,ko01000 - - - NIR_SIR,NIR_SIR_ferr QTD1_k127_3275927_3 1122603.ATVI01000008_gene2454 1.35e-37 143.0 COG1136@1|root,COG1136@2|Bacteria,1MVSQ@1224|Proteobacteria,1RMWK@1236|Gammaproteobacteria,1X2X9@135614|Xanthomonadales 135614|Xanthomonadales V Part of the ABC transporter complex LolCDE involved in the translocation of lolD - - ko:K09810 ko02010,map02010 M00255 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.125 - - ABC_tran QTD1_k127_3275927_4 1123279.ATUS01000004_gene2915 7.927e-33 141.0 COG3216@1|root,COG3216@2|Bacteria,1RGV6@1224|Proteobacteria,1S682@1236|Gammaproteobacteria,1J6CA@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria S protein conserved in bacteria TLL0138 - - ko:K09928 - - - - ko00000 - - - DUF2062 QTD1_k127_3275927_2 519989.ECTPHS_10696 3.908e-63 223.0 COG0811@1|root,COG0811@2|Bacteria,1QNJ1@1224|Proteobacteria,1RQWT@1236|Gammaproteobacteria,1WX5A@135613|Chromatiales 135613|Chromatiales U PFAM MotA TolQ ExbB proton channel - - - ko:K03561 - - - - ko00000,ko02000 1.A.30.2.1 - - MotA_ExbB QTD1_k127_3275927_6 1384056.N787_02305 1.406e-25 116.0 COG0848@1|root,COG0848@2|Bacteria,1N0ZA@1224|Proteobacteria,1S90K@1236|Gammaproteobacteria,1X6SD@135614|Xanthomonadales 135614|Xanthomonadales U Biopolymer exbD4 - - ko:K03559 - - - - ko00000,ko02000 1.A.30.2.1 - - ExbD QTD1_k127_3275927_0 519989.ECTPHS_10706 1.553e-171 566.0 COG1132@1|root,COG1132@2|Bacteria,1MUBM@1224|Proteobacteria,1RMUR@1236|Gammaproteobacteria,1WW89@135613|Chromatiales 135613|Chromatiales V Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation msbA - - ko:K11085 ko02010,map02010 - - - ko00000,ko00001,ko01000,ko02000 3.A.1.106 - - ABC_membrane,ABC_tran QTD1_k127_3275927_1 1045855.DSC_09075 2.241e-83 295.0 COG1663@1|root,COG1663@2|Bacteria,1MU8G@1224|Proteobacteria,1RMMW@1236|Gammaproteobacteria,1X3DM@135614|Xanthomonadales 135614|Xanthomonadales M Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) lpxK - 2.7.1.130 ko:K00912 ko00540,ko01100,map00540,map01100 M00060 R04657 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko01005 - - - LpxK QTD1_k127_3275927_7 557598.LHK_01103 6.358e-20 90.0 COG2835@1|root,COG2835@2|Bacteria,1N6Y2@1224|Proteobacteria,2VW58@28216|Betaproteobacteria,2KRZ9@206351|Neisseriales 206351|Neisseriales S Belongs to the UPF0434 family - - - ko:K09791 - - - - ko00000 - - - Trm112p QTD1_k127_3275927_5 1049564.TevJSym_al00440 2.264e-28 117.0 COG1212@1|root,COG1212@2|Bacteria,1MUUU@1224|Proteobacteria,1RMAE@1236|Gammaproteobacteria,1J5FQ@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria H Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria kdsB GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005996,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008690,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0019294,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046394,GO:0046400,GO:0046401,GO:0046872,GO:0070567,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.7.38 ko:K00979 ko00540,ko01100,map00540,map01100 M00063 R03351,R11396 RC00152,RC00910 ko00000,ko00001,ko00002,ko01000,ko01005 - - iAF1260.b0918,iB21_1397.B21_00929,iBWG_1329.BWG_0770,iECBD_1354.ECBD_2677,iECB_1328.ECB_00922,iECDH10B_1368.ECDH10B_0988,iECDH1ME8569_1439.ECDH1ME8569_0869,iECD_1391.ECD_00922,iETEC_1333.ETEC_0986,iEcDH1_1363.EcDH1_2725,iEcHS_1320.EcHS_A1025,iEcolC_1368.EcolC_2678,iJO1366.b0918,iJR904.b0918,iPC815.YPO1400,iUMNK88_1353.UMNK88_1071,iY75_1357.Y75_RS04770 CTP_transf_3 QTD1_k127_3279501_1 748658.KB907313_gene2292 3.379e-78 276.0 COG1295@1|root,COG1959@1|root,COG1295@2|Bacteria,COG1959@2|Bacteria,1QICW@1224|Proteobacteria,1RMKI@1236|Gammaproteobacteria,1WWKW@135613|Chromatiales 135613|Chromatiales K ribonuclease BN - - - ko:K07058 - - - - ko00000 - - - Rrf2,Virul_fac_BrkB QTD1_k127_3279501_0 395495.Lcho_2656 6.254e-118 384.0 COG0614@1|root,COG0614@2|Bacteria,1PKNF@1224|Proteobacteria,2VMK5@28216|Betaproteobacteria,1KJ2A@119065|unclassified Burkholderiales 28216|Betaproteobacteria P Periplasmic binding protein - - - ko:K02016 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14 - - Peripla_BP_2 QTD1_k127_3279501_2 314278.NB231_11669 1.922e-48 181.0 COG1076@1|root,COG1076@2|Bacteria,1N270@1224|Proteobacteria,1RP0P@1236|Gammaproteobacteria,1WY9S@135613|Chromatiales 135613|Chromatiales O Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host djlA - - ko:K05801 - - - - ko00000,ko03110 - - - DnaJ,TerB QTD1_k127_3284041_1 420662.Mpe_A0589 1.104e-60 222.0 COG3217@1|root,COG3217@2|Bacteria,1MXN2@1224|Proteobacteria,2VI15@28216|Betaproteobacteria,1KIU1@119065|unclassified Burkholderiales 28216|Betaproteobacteria S MOSC N-terminal beta barrel domain ycbX - - ko:K07140 - - - - ko00000 - - - MOSC,MOSC_N QTD1_k127_3284041_0 215803.DB30_3065 7.522e-275 859.0 COG0405@1|root,COG0405@2|Bacteria,1MUV6@1224|Proteobacteria,42NY8@68525|delta/epsilon subdivisions,2WJNT@28221|Deltaproteobacteria,2YXXC@29|Myxococcales 28221|Deltaproteobacteria E Gamma-glutamyltranspeptidase - - 2.3.2.2,3.4.19.13 ko:K00681 ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100 - R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935 RC00064,RC00090,RC00096 ko00000,ko00001,ko01000,ko01002 - - - G_glu_transpept QTD1_k127_3284041_2 1144319.PMI16_04825 3.561e-38 148.0 COG3766@1|root,COG3766@2|Bacteria,1N14W@1224|Proteobacteria,2VUJZ@28216|Betaproteobacteria,47543@75682|Oxalobacteraceae 28216|Betaproteobacteria S Domain of Unknown Function (DUF350) yjfL - - ko:K08989 - - - - ko00000 - - - DUF350 QTD1_k127_329429_8 1292034.OR37_02857 5.812e-47 177.0 COG3391@1|root,COG3391@2|Bacteria,1P862@1224|Proteobacteria,2V9VC@28211|Alphaproteobacteria,2KJJ6@204458|Caulobacterales 204458|Caulobacterales S TIGRFAM 40-residue YVTN family beta-propeller repeat - - - - - - - - - - - - Lactonase QTD1_k127_329429_2 1122951.ATUE01000006_gene1176 4.8e-144 467.0 COG1398@1|root,COG1398@2|Bacteria,1N2MA@1224|Proteobacteria,1RM88@1236|Gammaproteobacteria,3NIR4@468|Moraxellaceae 1236|Gammaproteobacteria I Fatty acid desaturase desC - 1.14.19.1 ko:K00507 ko01040,ko01212,ko03320,ko04152,ko04212,map01040,map01212,map03320,map04152,map04212 - R02222 RC00917 ko00000,ko00001,ko01000,ko01004 - - - FA_desaturase QTD1_k127_329429_5 483219.LILAB_11070 6.811e-105 345.0 COG0217@1|root,COG0217@2|Bacteria,1MW3X@1224|Proteobacteria,42N7Q@68525|delta/epsilon subdivisions,2WJ1I@28221|Deltaproteobacteria,2YW96@29|Myxococcales 28221|Deltaproteobacteria K Transcriptional regulatory protein - - - - - - - - - - - - Transcrip_reg QTD1_k127_329429_12 314278.NB231_17323 1.133e-26 115.0 COG0454@1|root,COG0456@2|Bacteria,1NCMN@1224|Proteobacteria,1SFS0@1236|Gammaproteobacteria 1236|Gammaproteobacteria K Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_10 QTD1_k127_329429_9 204669.Acid345_1450 2.628e-46 171.0 2B1QU@1|root,31U6H@2|Bacteria,3Y5EE@57723|Acidobacteria,2JJUF@204432|Acidobacteriia 204432|Acidobacteriia S Protein of unknown function (DUF3224) - - - - - - - - - - - - DUF3224 QTD1_k127_329429_6 582744.Msip34_1417 2.57e-69 244.0 COG0242@1|root,COG0242@2|Bacteria,1R9XK@1224|Proteobacteria,2VQ0U@28216|Betaproteobacteria,2KKUN@206350|Nitrosomonadales 206350|Nitrosomonadales J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions - - 3.5.1.88 ko:K01462 - - - - ko00000,ko01000 - - - Pep_deformylase QTD1_k127_329429_1 1123367.C666_10720 6.909e-169 542.0 COG0535@1|root,COG0535@2|Bacteria,1MUQP@1224|Proteobacteria,2VIK6@28216|Betaproteobacteria,2KU6M@206389|Rhodocyclales 206389|Rhodocyclales H Belongs to the radical SAM superfamily. PqqE family pqqE - - ko:K06139 - - - - ko00000 - - - Fer4_14,Radical_SAM,SPASM QTD1_k127_329429_13 1328313.DS2_05565 5.229e-17 95.0 COG0790@1|root,COG0810@1|root,COG0790@2|Bacteria,COG0810@2|Bacteria,1N4EV@1224|Proteobacteria,1RP68@1236|Gammaproteobacteria 1236|Gammaproteobacteria M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - ko:K07126 - - - - ko00000 - - - Sel1,TonB_C QTD1_k127_329429_11 543728.Vapar_3054 1.788e-27 119.0 2E4CK@1|root,32Z81@2|Bacteria,1N7JR@1224|Proteobacteria,2VVSC@28216|Betaproteobacteria,4AG0T@80864|Comamonadaceae 28216|Betaproteobacteria S PFAM coenzyme PQQ synthesis D pqqD - - ko:K06138 - - - - ko00000 - - - PqqD QTD1_k127_329429_4 1158292.JPOE01000002_gene1766 8.388e-110 362.0 COG5424@1|root,COG5424@2|Bacteria,1MW7G@1224|Proteobacteria,2VI0X@28216|Betaproteobacteria,1KJKW@119065|unclassified Burkholderiales 28216|Betaproteobacteria H Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ pqqC - 1.3.3.11 ko:K06137 - - - - ko00000,ko01000 - - - TENA_THI-4 QTD1_k127_329429_3 62928.azo1187 1.007e-120 395.0 COG1235@1|root,COG1235@2|Bacteria,1MWI5@1224|Proteobacteria,2VJUF@28216|Betaproteobacteria,2KVU8@206389|Rhodocyclales 206389|Rhodocyclales S May be involved in the transport of PQQ or its precursor to the periplasm pqqB - - ko:K06136 - - - - ko00000 - - - Lactamase_B_2 QTD1_k127_329429_10 767434.Fraau_1464 2.136e-45 175.0 COG4260@1|root,COG4260@2|Bacteria,1PB6V@1224|Proteobacteria,1SURY@1236|Gammaproteobacteria 1236|Gammaproteobacteria S virion core protein, lumpy skin disease virus - - - - - - - - - - - - - QTD1_k127_329429_7 1122604.JONR01000002_gene1595 2.147e-53 199.0 COG1711@1|root,COG1711@2|Bacteria,1RIA0@1224|Proteobacteria,1S715@1236|Gammaproteobacteria,1X6CW@135614|Xanthomonadales 135614|Xanthomonadales S Protein of unknown function (DUF3014) - - - - - - - - - - - - DUF3014 QTD1_k127_329429_0 748280.NH8B_2766 8.11e-238 744.0 COG1201@1|root,COG1201@2|Bacteria,1MUSW@1224|Proteobacteria,2VI8X@28216|Betaproteobacteria 28216|Betaproteobacteria L DEAD DEAH box helicase lhr - - ko:K03724 - - - - ko00000,ko01000,ko03400 - - - DEAD,DEAD_assoc,Helicase_C QTD1_k127_3341284_7 1122604.JONR01000007_gene2841 1.02e-23 119.0 COG3164@1|root,COG3164@2|Bacteria,1MXWF@1224|Proteobacteria,1RNUK@1236|Gammaproteobacteria,1X37J@135614|Xanthomonadales 135614|Xanthomonadales S membrane - - - - - - - - - - - - AsmA_2,DUF3971 QTD1_k127_3341284_3 396588.Tgr7_2268 3.825e-98 327.0 COG0388@1|root,COG0388@2|Bacteria,1MUUB@1224|Proteobacteria,1RNVZ@1236|Gammaproteobacteria,1WW30@135613|Chromatiales 135613|Chromatiales S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - ko:K11206 - - - - ko00000,ko01000 - - - CN_hydrolase QTD1_k127_3341284_0 314278.NB231_05811 1.006e-210 667.0 COG0312@1|root,COG0312@2|Bacteria,1MUSK@1224|Proteobacteria,1RMA5@1236|Gammaproteobacteria,1WWCQ@135613|Chromatiales 135613|Chromatiales S modulator of DNA gyrase tldD - - ko:K03568 - - - - ko00000,ko01002 - - - PmbA_TldD QTD1_k127_3341284_4 396588.Tgr7_2396 3.811e-78 279.0 COG1716@1|root,COG3267@1|root,COG1716@2|Bacteria,COG3267@2|Bacteria,1MU3G@1224|Proteobacteria,1RMI0@1236|Gammaproteobacteria,1WWX7@135613|Chromatiales 135613|Chromatiales U Type II secretory pathway component ExeA - - - ko:K02450,ko:K12283 - M00331 - - ko00000,ko00002,ko02044 9.B.42 - - AAA_22 QTD1_k127_3341284_2 869210.Marky_1688 1.377e-110 374.0 COG0026@1|root,COG0026@2|Bacteria,1WITC@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) purK - 6.3.4.18 ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R07404 RC01927 ko00000,ko00001,ko00002,ko01000 - - - ATP-grasp QTD1_k127_3341284_5 869210.Marky_1689 1.543e-63 229.0 COG0041@1|root,COG0041@2|Bacteria,1WJ89@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) purE - 5.4.99.18 ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R07405 RC01947 ko00000,ko00001,ko00002,ko01000 - - - AIRC QTD1_k127_3341284_8 519989.ECTPHS_02971 4.314e-23 105.0 COG3028@1|root,COG3028@2|Bacteria,1MZ4R@1224|Proteobacteria,1S9JJ@1236|Gammaproteobacteria,1WY21@135613|Chromatiales 135613|Chromatiales S Belongs to the UPF0307 family - - - ko:K09889 - - - - ko00000,ko03009 - - - DUF615 QTD1_k127_3341284_1 243233.MCA0383 6.422e-155 510.0 COG0312@1|root,COG0312@2|Bacteria,1MUVW@1224|Proteobacteria,1RPJF@1236|Gammaproteobacteria,1XDTZ@135618|Methylococcales 135618|Methylococcales S modulator of DNA gyrase pmbA - - ko:K03592 - - - - ko00000,ko01002 - - - PmbA_TldD QTD1_k127_3341284_6 187272.Mlg_0413 5.596e-54 198.0 COG0312@1|root,COG0312@2|Bacteria,1MUVW@1224|Proteobacteria,1RPJF@1236|Gammaproteobacteria,1WWPA@135613|Chromatiales 135613|Chromatiales S modulator of DNA gyrase - - - ko:K03592 - - - - ko00000,ko01002 - - - PmbA_TldD QTD1_k127_3342487_4 713586.KB900536_gene1715 4.639e-33 130.0 COG0776@1|root,COG0776@2|Bacteria,1RFWH@1224|Proteobacteria,1S5GE@1236|Gammaproteobacteria 1236|Gammaproteobacteria L Belongs to the bacterial histone-like protein family VL23_14575 - - - - - - - - - - - Bac_DNA_binding QTD1_k127_3342487_5 1168065.DOK_16878 1.773e-30 128.0 COG0762@1|root,COG0762@2|Bacteria,1RCZV@1224|Proteobacteria,1S6DW@1236|Gammaproteobacteria,1J6HX@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria S integral membrane protein yggT GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - ko:K02221 - - - - ko00000,ko02044 - - - YGGT QTD1_k127_3342487_3 1384054.N790_07730 8.849e-58 211.0 COG0345@1|root,COG0345@2|Bacteria,1R5J1@1224|Proteobacteria,1RNQK@1236|Gammaproteobacteria,1X56M@135614|Xanthomonadales 135614|Xanthomonadales E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline proC - 1.5.1.2 ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 M00015 R01248,R01251,R03291,R03293 RC00054,RC00083 ko00000,ko00001,ko00002,ko01000 - - - F420_oxidored,P5CR_dimer QTD1_k127_3342487_2 204773.HEAR0290 8.906e-72 249.0 COG0325@1|root,COG0325@2|Bacteria,1MWN7@1224|Proteobacteria,2VHNY@28216|Betaproteobacteria,472ST@75682|Oxalobacteraceae 28216|Betaproteobacteria S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis - - - ko:K06997 - - - - ko00000 - - - Ala_racemase_N QTD1_k127_3342487_0 572477.Alvin_2616 5.099e-180 569.0 COG2805@1|root,COG2805@2|Bacteria,1MU3J@1224|Proteobacteria,1RN8G@1236|Gammaproteobacteria,1WWZV@135613|Chromatiales 135613|Chromatiales NU PFAM Type II secretion system protein E - - - ko:K02669 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - T2SSE QTD1_k127_3342487_1 640081.Dsui_0605 3.066e-147 471.0 COG5008@1|root,COG5008@2|Bacteria,1QTTX@1224|Proteobacteria,2VIWS@28216|Betaproteobacteria,2KU9J@206389|Rhodocyclales 206389|Rhodocyclales NU twitching motility protein - - - ko:K02670 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - T2SSE QTD1_k127_339259_4 330214.NIDE2169 3.358e-95 337.0 COG1506@1|root,COG1506@2|Bacteria 2|Bacteria E serine-type peptidase activity - - - - - - - - - - - - Peptidase_S9 QTD1_k127_339259_6 869210.Marky_1674 1.425e-75 272.0 COG0626@1|root,COG0626@2|Bacteria,1WJNP@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus E PFAM Cys Met metabolism PLP-dependent enzyme - - 4.4.1.11 ko:K01761 ko00270,ko00450,map00270,map00450 - R00654,R04770 RC00196,RC00348,RC01209,RC01210 ko00000,ko00001,ko01000 - - - Cys_Met_Meta_PP QTD1_k127_339259_5 1384054.N790_10440 2.282e-89 301.0 COG0388@1|root,COG0388@2|Bacteria,1MXBR@1224|Proteobacteria,1RQ4Z@1236|Gammaproteobacteria,1X4JY@135614|Xanthomonadales 135614|Xanthomonadales S carbon-nitrogen hydrolase - - 3.5.1.3 ko:K13566 ko00250,map00250 - R00269,R00348 RC00010 ko00000,ko00001,ko01000 - - - CN_hydrolase QTD1_k127_339259_0 314278.NB231_14448 1.352e-132 435.0 COG0436@1|root,COG0436@2|Bacteria,1MW0Z@1224|Proteobacteria,1RNN0@1236|Gammaproteobacteria,1X2EP@135613|Chromatiales 135613|Chromatiales E Aminotransferase class I and II - - - - - - - - - - - - Aminotran_1_2 QTD1_k127_339259_7 33876.JNXY01000013_gene4103 3.525e-66 233.0 COG1940@1|root,COG1940@2|Bacteria,2GJA0@201174|Actinobacteria,4DCHS@85008|Micromonosporales 201174|Actinobacteria GK ROK family ppgK - 2.7.1.2,2.7.1.63 ko:K00845,ko:K00886 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786,R02187,R02189 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - ROK QTD1_k127_339259_3 1121033.AUCF01000004_gene4827 4.272e-98 329.0 COG1177@1|root,COG1177@2|Bacteria,1MVC5@1224|Proteobacteria,2TRRJ@28211|Alphaproteobacteria,2JQ7X@204441|Rhodospirillales 204441|Rhodospirillales E COG1177 ABC-type spermidine putrescine transport system, permease component II potI - - ko:K11074 ko02010,map02010 M00300 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11.2 - - BPD_transp_1 QTD1_k127_339259_2 396588.Tgr7_1262 2.209e-104 354.0 COG1176@1|root,COG1176@2|Bacteria,1MVGM@1224|Proteobacteria,1RNNZ@1236|Gammaproteobacteria,1WW3Y@135613|Chromatiales 135613|Chromatiales E PFAM binding-protein-dependent transport systems inner membrane component - - - ko:K11071,ko:K11075 ko02010,map02010 M00299,M00300 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11.1,3.A.1.11.2 - - BPD_transp_1 QTD1_k127_339259_1 1121033.AUCF01000004_gene4825 5.48e-113 372.0 COG3842@1|root,COG3842@2|Bacteria,1MU3I@1224|Proteobacteria,2TQMJ@28211|Alphaproteobacteria,2JPVQ@204441|Rhodospirillales 204441|Rhodospirillales E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system potA - - ko:K11076 ko02010,map02010 M00300 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11.2 - - ABC_tran,TOBE_2 QTD1_k127_3410813_5 765914.ThisiDRAFT_1682 6.57e-55 197.0 COG0092@1|root,COG0092@2|Bacteria,1MUAI@1224|Proteobacteria,1RN0P@1236|Gammaproteobacteria,1WVYC@135613|Chromatiales 135613|Chromatiales J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation rpsC - - ko:K02982 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - KH_2,Ribosomal_S3_C QTD1_k127_3410813_3 713587.THITH_14255 4.679e-60 210.0 COG0197@1|root,COG0197@2|Bacteria,1RA0Z@1224|Proteobacteria,1S201@1236|Gammaproteobacteria,1WY6U@135613|Chromatiales 135613|Chromatiales J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs rplP - - ko:K02878 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L16 QTD1_k127_3410813_12 1266909.AUAG01000019_gene479 2.886e-10 63.0 COG0255@1|root,COG0255@2|Bacteria,1N6PR@1224|Proteobacteria,1SCBN@1236|Gammaproteobacteria,1WZ6K@135613|Chromatiales 135613|Chromatiales J Belongs to the universal ribosomal protein uL29 family rpmC - - ko:K02904 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L29 QTD1_k127_3410813_10 1116472.MGMO_66c00280 1.317e-26 114.0 COG0186@1|root,COG0186@2|Bacteria,1MZIK@1224|Proteobacteria,1S8SS@1236|Gammaproteobacteria,1XFGP@135618|Methylococcales 135618|Methylococcales J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA rpsQ - - ko:K02961 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S17 QTD1_k127_3410813_4 1163407.UU7_10835 1.991e-57 207.0 COG0093@1|root,COG0093@2|Bacteria,1RCWZ@1224|Proteobacteria,1S3Z3@1236|Gammaproteobacteria,1X6K2@135614|Xanthomonadales 135614|Xanthomonadales J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome rplN GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - ko:K02874 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L14 QTD1_k127_3410813_7 62928.azo3406 7.271e-40 150.0 COG0198@1|root,COG0198@2|Bacteria,1MZQD@1224|Proteobacteria,2VUC6@28216|Betaproteobacteria,2KWPF@206389|Rhodocyclales 206389|Rhodocyclales J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit rplX - - ko:K02895 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - KOW,ribosomal_L24 QTD1_k127_3410813_0 1294143.H681_02835 8.177e-75 261.0 COG0094@1|root,COG0094@2|Bacteria,1MUU9@1224|Proteobacteria,1RPE1@1236|Gammaproteobacteria 1236|Gammaproteobacteria J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits rplE GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02931 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L5,Ribosomal_L5_C QTD1_k127_3410813_9 399739.Pmen_3896 3.062e-31 124.0 COG0199@1|root,COG0199@2|Bacteria,1MZDT@1224|Proteobacteria,1S62N@1236|Gammaproteobacteria,1YGDI@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site rpsN GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02954 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S14 QTD1_k127_3410813_6 713586.KB900536_gene1156 1.802e-54 194.0 COG0096@1|root,COG0096@2|Bacteria,1RDG3@1224|Proteobacteria,1S452@1236|Gammaproteobacteria,1WXYT@135613|Chromatiales 135613|Chromatiales J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit rpsH - - ko:K02994 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S8 QTD1_k127_3410813_2 349521.HCH_06201 2.331e-62 218.0 COG0097@1|root,COG0097@2|Bacteria,1R9YZ@1224|Proteobacteria,1S1Z1@1236|Gammaproteobacteria,1XJA3@135619|Oceanospirillales 135619|Oceanospirillales J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center rplF - - ko:K02933 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L6 QTD1_k127_3410813_8 1283300.ATXB01000001_gene628 1.768e-35 147.0 COG0256@1|root,COG0256@2|Bacteria,1RGY7@1224|Proteobacteria,1S5V2@1236|Gammaproteobacteria,1XFB0@135618|Methylococcales 135618|Methylococcales J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance rplR - - ko:K02881 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L18p QTD1_k127_3410813_1 713587.THITH_14205 1.821e-67 233.0 COG0098@1|root,COG0098@2|Bacteria,1MUS4@1224|Proteobacteria,1RNEV@1236|Gammaproteobacteria,1WX2D@135613|Chromatiales 135613|Chromatiales J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body rpsE - - ko:K02988 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S5,Ribosomal_S5_C QTD1_k127_3410813_11 391615.ABSJ01000049_gene1550 4.19e-13 75.0 COG1841@1|root,COG1841@2|Bacteria,1N6ZE@1224|Proteobacteria,1SC8N@1236|Gammaproteobacteria,1J78G@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria J Ribosomal protein L30p/L7e rpmD GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02907 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L30 QTD1_k127_3418068_8 1340493.JNIF01000003_gene2726 3.108e-23 116.0 COG1470@1|root,COG4625@1|root,COG1470@2|Bacteria,COG4625@2|Bacteria 2|Bacteria T pathogenesis - - - - - - - - - - - - Beta_helix,CHB_HEX_C_1,CarboxypepD_reg,DUF11,He_PIG,Kelch_1,NPCBM_assoc,VCBS QTD1_k127_3418068_6 1242864.D187_003640 4.918e-45 186.0 COG3055@1|root,COG3055@2|Bacteria,1Q4PQ@1224|Proteobacteria,4347S@68525|delta/epsilon subdivisions,2X34Y@28221|Deltaproteobacteria,2YUAC@29|Myxococcales 28221|Deltaproteobacteria V Kelch motif - - - - - - - - - - - - Kelch_1,Kelch_4,TSP_3 QTD1_k127_3418068_7 983917.RGE_24220 3.047e-39 159.0 COG1309@1|root,COG1309@2|Bacteria,1NDUF@1224|Proteobacteria,2VXMY@28216|Betaproteobacteria,1KMRG@119065|unclassified Burkholderiales 28216|Betaproteobacteria K tetR family - - - - - - - - - - - - TetR_N QTD1_k127_3418068_4 1453496.AT03_14300 4.414e-88 301.0 COG0845@1|root,COG0845@2|Bacteria,1MUG6@1224|Proteobacteria,1RP16@1236|Gammaproteobacteria 1236|Gammaproteobacteria M Secretion protein ybhG GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0042221,GO:0044464,GO:0046677,GO:0050896,GO:0071944 - ko:K01993 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 QTD1_k127_3418068_0 686340.Metal_0971 5.31e-231 728.0 COG1131@1|root,COG1131@2|Bacteria,1MUX3@1224|Proteobacteria,1RMM4@1236|Gammaproteobacteria,1XH1A@135618|Methylococcales 135618|Methylococcales V ABC transporter - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran QTD1_k127_3418068_1 667121.ET1_09_00890 2.545e-143 464.0 COG0842@1|root,COG0842@2|Bacteria,1MW5R@1224|Proteobacteria,1RPB4@1236|Gammaproteobacteria 1236|Gammaproteobacteria V ABC-type multidrug transport system, permease component ybhS GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006855,GO:0008150,GO:0015562,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_2,ABC2_membrane_3 QTD1_k127_3418068_3 686340.Metal_0969 2.251e-120 397.0 COG0842@1|root,COG0842@2|Bacteria,1MW5R@1224|Proteobacteria,1SYDD@1236|Gammaproteobacteria,1XEK4@135618|Methylococcales 135618|Methylococcales V ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 QTD1_k127_3418068_5 658187.LDG_7600 3.542e-72 262.0 COG1538@1|root,COG1538@2|Bacteria,1MUA8@1224|Proteobacteria,1RN5K@1236|Gammaproteobacteria,1JFXS@118969|Legionellales 118969|Legionellales MU Outer membrane efflux protein - - - - - - - - - - - - OEP QTD1_k127_3418068_2 1040989.AWZU01000011_gene4162 9.666e-126 413.0 COG0477@1|root,COG0477@2|Bacteria,1MWUR@1224|Proteobacteria,2TT7N@28211|Alphaproteobacteria,3JQZB@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria EGP Major Facilitator Superfamily - - - ko:K08169 - - - - ko00000,ko02000 2.A.1.3.17 - - MFS_1 QTD1_k127_3433271_2 1379270.AUXF01000001_gene2673 1.641e-16 79.0 COG0520@1|root,COG0520@2|Bacteria,1ZSV8@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Aminotransferase class-V - - - - - - - - - - - - Aminotran_5 QTD1_k127_3433271_3 204669.Acid345_2472 2.904e-10 67.0 2CG7C@1|root,33FVT@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - QTD1_k127_3433271_1 1123073.KB899242_gene1516 3.125e-127 411.0 COG4242@1|root,COG4242@2|Bacteria,1PR9J@1224|Proteobacteria,1RVJH@1236|Gammaproteobacteria,1X9SP@135614|Xanthomonadales 135614|Xanthomonadales PQ Peptidase family S51 - - 3.4.15.6 ko:K13282 - - R09722 RC00064,RC00141 ko00000,ko01000,ko01002 - - - Peptidase_S51 QTD1_k127_3433271_0 1121013.P873_12400 0.0 1516.0 COG0189@1|root,COG0769@1|root,COG0189@2|Bacteria,COG0769@2|Bacteria,1MVN2@1224|Proteobacteria,1RS1C@1236|Gammaproteobacteria,1X7FN@135614|Xanthomonadales 135614|Xanthomonadales HJ Prokaryotic glutathione synthetase, ATP-grasp domain - - 6.3.2.29,6.3.2.30 ko:K03802 - - - - ko00000,ko01000 - - - Acetyltransf_1,Mur_ligase_C,Mur_ligase_M,RimK QTD1_k127_3449444_0 768671.ThimaDRAFT_2664 0.0 1080.0 COG1032@1|root,COG1032@2|Bacteria,1MUG3@1224|Proteobacteria,1RN9V@1236|Gammaproteobacteria,1WWU3@135613|Chromatiales 135613|Chromatiales C UPF0313 protein - - - - - - - - - - - - DUF3362,Radical_SAM,Radical_SAM_N QTD1_k127_3449444_7 1267533.KB906737_gene1757 3.279e-45 170.0 COG1680@1|root,COG1680@2|Bacteria,3Y889@57723|Acidobacteria,2JNBM@204432|Acidobacteriia 204432|Acidobacteriia V Domain of unknown function (DUF4440) - - - - - - - - - - - - DUF4440 QTD1_k127_3449444_11 861299.J421_1228 2.217e-25 111.0 2E9H4@1|root,333Q5@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - QTD1_k127_3449444_9 861299.J421_1227 4.646e-33 133.0 2DPKR@1|root,332JI@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - QTD1_k127_3449444_10 1122604.JONR01000020_gene450 2.356e-27 129.0 COG3591@1|root,COG3591@2|Bacteria,1QVS4@1224|Proteobacteria,1S2YZ@1236|Gammaproteobacteria,1X6BG@135614|Xanthomonadales 135614|Xanthomonadales E Pkd domain containing protein - - 3.4.21.50 ko:K01337 - - - - ko00000,ko01000,ko01002 - - - PKD,Trypsin_2 QTD1_k127_3449444_6 443598.AUFA01000007_gene4528 3.596e-46 175.0 2B43Q@1|root,31WU7@2|Bacteria,1R7J3@1224|Proteobacteria,2U2IT@28211|Alphaproteobacteria,3JX4G@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_3449444_2 686340.Metal_1384 3.326e-215 677.0 COG3876@1|root,COG3876@2|Bacteria,1MX3S@1224|Proteobacteria,1RSA3@1236|Gammaproteobacteria,1XEB5@135618|Methylococcales 135618|Methylococcales S Protein of unknown function (DUF1343) - - - - - - - - - - - - DUF1343 QTD1_k127_3449444_8 76114.ebA3238 5.266e-42 161.0 2C0PI@1|root,32VVI@2|Bacteria,1N1H7@1224|Proteobacteria,2VUDK@28216|Betaproteobacteria,2KX1H@206389|Rhodocyclales 206389|Rhodocyclales - - - - - - - - - - - - - - - QTD1_k127_3449444_4 288000.BBta_0874 4.357e-77 267.0 COG2267@1|root,COG2267@2|Bacteria,1QUZX@1224|Proteobacteria,2TWE4@28211|Alphaproteobacteria,3JTRZ@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria I Thioesterase domain - - - - - - - - - - - - Abhydrolase_1,Abhydrolase_6 QTD1_k127_3449444_3 378806.STAUR_1666 3.489e-143 463.0 2C57D@1|root,2Z7RS@2|Bacteria,1MX6G@1224|Proteobacteria,42Y78@68525|delta/epsilon subdivisions,2X3CW@28221|Deltaproteobacteria,2YUS0@29|Myxococcales 28221|Deltaproteobacteria S Protein of unknown function (DUF2891) - - - - - - - - - - - - DUF2891 QTD1_k127_3449444_1 1123073.KB899241_gene2163 1.36e-244 773.0 COG1680@1|root,COG1680@2|Bacteria,1MVZN@1224|Proteobacteria,1RP0R@1236|Gammaproteobacteria,1X55T@135614|Xanthomonadales 135614|Xanthomonadales V Beta-lactamase - - - - - - - - - - - - Beta-lactamase,DUF3471 QTD1_k127_3449444_5 1123073.KB899241_gene2162 1.241e-62 219.0 COG3949@1|root,COG3949@2|Bacteria,1QAYU@1224|Proteobacteria,1T7ME@1236|Gammaproteobacteria,1X9FE@135614|Xanthomonadales 135614|Xanthomonadales S Membrane - - - - - - - - - - - - - QTD1_k127_34667_4 925775.XVE_5014 1.461e-10 64.0 COG0122@1|root,COG2169@1|root,COG0122@2|Bacteria,COG2169@2|Bacteria,1QTXM@1224|Proteobacteria,1RNQB@1236|Gammaproteobacteria,1X4AJ@135614|Xanthomonadales 135614|Xanthomonadales K AlkA N-terminal domain Ada - 3.2.2.21 ko:K13529 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03000,ko03400 - - - Ada_Zn_binding,AlkA_N,HTH_18,HhH-GPD QTD1_k127_34667_1 159450.NH14_09095 7.152e-73 251.0 COG0625@1|root,COG0625@2|Bacteria,1RKXB@1224|Proteobacteria,2WEJX@28216|Betaproteobacteria 28216|Betaproteobacteria O Glutathione S-transferase - - 2.5.1.18 ko:K00799 ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418 - R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905 RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944 ko00000,ko00001,ko01000,ko02000 1.A.12.2.2,1.A.12.3.2 - - GST_C_2,GST_N QTD1_k127_34667_3 1535422.ND16A_3904 2.747e-29 123.0 2ARX9@1|root,31H95@2|Bacteria,1RKCT@1224|Proteobacteria,1S8AF@1236|Gammaproteobacteria,2Q8DR@267889|Colwelliaceae 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_34667_2 702459.BBPR_1094 9.443e-30 126.0 COG3189@1|root,COG3189@2|Bacteria,2IQC0@201174|Actinobacteria,4D18P@85004|Bifidobacteriales 201174|Actinobacteria K Protein of unknown function, DUF488 - - - - - - - - - - - - DUF488 QTD1_k127_34667_0 575540.Isop_2008 9.464e-78 274.0 COG2271@1|root,COG2271@2|Bacteria,2IYU6@203682|Planctomycetes 203682|Planctomycetes G Major Facilitator Superfamily - - - ko:K02445 - - - - ko00000,ko02000 2.A.1.4.3 - - MFS_1 QTD1_k127_3480207_9 1026882.MAMP_02277 7.542e-18 89.0 COG1183@1|root,COG1183@2|Bacteria,1MWD9@1224|Proteobacteria,1RPBB@1236|Gammaproteobacteria,4603D@72273|Thiotrichales 72273|Thiotrichales I Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - 2.7.8.8 ko:K17103 ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110 M00093 R01800 RC00002,RC00017,RC02795 ko00000,ko00001,ko00002,ko01000 - - - CDP-OH_P_transf QTD1_k127_3480207_5 396588.Tgr7_2152 8.339e-78 271.0 COG1573@1|root,COG1573@2|Bacteria,1MWX1@1224|Proteobacteria,1S2U7@1236|Gammaproteobacteria,1WWN0@135613|Chromatiales 135613|Chromatiales L TIGRFAM Phage SPO1 DNA polymerase-related protein - - 3.2.2.27 ko:K21929 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - UDG QTD1_k127_3480207_7 1500893.JQNB01000001_gene3561 6.214e-42 159.0 COG0454@1|root,COG0456@2|Bacteria,1RIE6@1224|Proteobacteria,1S9G0@1236|Gammaproteobacteria,1X6EJ@135614|Xanthomonadales 135614|Xanthomonadales K Ribosomal-protein-alanine acetyltransferase rimI - 2.3.1.128 ko:K03789 - - - - ko00000,ko01000,ko03009 - - - Acetyltransf_1 QTD1_k127_3480207_1 713587.THITH_03750 3.485e-246 773.0 COG4108@1|root,COG4108@2|Bacteria,1MU7X@1224|Proteobacteria,1RMFT@1236|Gammaproteobacteria,1WX2I@135613|Chromatiales 135613|Chromatiales J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP prfC - - ko:K02837 - - - - ko00000,ko03012 - - - GTP_EFTU,GTP_EFTU_D2,RF3_C QTD1_k127_3480207_2 1120999.JONM01000011_gene1653 1.328e-149 499.0 COG1633@1|root,COG3369@1|root,COG3592@1|root,COG1633@2|Bacteria,COG3369@2|Bacteria,COG3592@2|Bacteria,1PMC0@1224|Proteobacteria,2W1FN@28216|Betaproteobacteria,2KTQS@206351|Neisseriales 206351|Neisseriales S Ferritin-like - - - ko:K20087 ko00404,ko01130,ko02024,map00404,map01130,map02024 M00808 R11131 RC03364 ko00000,ko00001,ko00002 - - - Ferritin-like QTD1_k127_3480207_8 1298858.AUEL01000022_gene5664 3.667e-24 103.0 COG3369@1|root,COG3592@1|root,COG3369@2|Bacteria,COG3592@2|Bacteria,1RCN9@1224|Proteobacteria,2U878@28211|Alphaproteobacteria 28211|Alphaproteobacteria S CDGSH-type zinc finger. Function unknown. - - - - - - - - - - - - Fer4_19,Ferritin-like,zf-CDGSH QTD1_k127_3480207_3 580332.Slit_2223 7.277e-117 401.0 COG1305@1|root,COG1305@2|Bacteria,1MWCE@1224|Proteobacteria,2VHZP@28216|Betaproteobacteria,44WEH@713636|Nitrosomonadales 28216|Betaproteobacteria E Domain of unknown function (DUF3488) - - 2.3.2.13 ko:K22452 - - - - ko00000,ko01000 - - - DUF3488,DUF4129,Transglut_core QTD1_k127_3480207_10 713586.KB900536_gene395 0.0001209 45.0 COG1721@1|root,COG1721@2|Bacteria,1R3QD@1224|Proteobacteria,1S5F7@1236|Gammaproteobacteria,1WWD0@135613|Chromatiales 135613|Chromatiales S Protein of unknown function DUF58 - - - - - - - - - - - - DUF58 QTD1_k127_3480207_6 1033802.SSPSH_002092 5.336e-47 181.0 COG1721@1|root,COG1721@2|Bacteria,1R3QD@1224|Proteobacteria,1S5F7@1236|Gammaproteobacteria 1236|Gammaproteobacteria S conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - - - - - - - - - - DUF58 QTD1_k127_3480207_4 519989.ECTPHS_05070 2.208e-110 377.0 COG0714@1|root,COG0714@2|Bacteria,1MUFN@1224|Proteobacteria,1RP45@1236|Gammaproteobacteria,1WXIF@135613|Chromatiales 135613|Chromatiales S associated with various cellular activities - - - ko:K03924 - - - - ko00000,ko01000 - - - AAA_3 QTD1_k127_3480207_0 765910.MARPU_10440 1.28e-254 799.0 COG0525@1|root,COG0525@2|Bacteria,1MV7B@1224|Proteobacteria,1RNEB@1236|Gammaproteobacteria,1WWJI@135613|Chromatiales 135613|Chromatiales J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner valS - 6.1.1.9 ko:K01873 ko00970,map00970 M00359,M00360 R03665 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,Val_tRNA-synt_C,tRNA-synt_1 QTD1_k127_3496299_3 765914.ThisiDRAFT_0190 1.881e-191 607.0 COG1282@1|root,COG1282@2|Bacteria,1MUP4@1224|Proteobacteria,1RMR4@1236|Gammaproteobacteria 1236|Gammaproteobacteria C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane pntB - 1.6.1.2 ko:K00325 ko00760,ko01100,map00760,map01100 - R00112 RC00001 ko00000,ko00001,ko01000 - - - PNTB QTD1_k127_3496299_0 685778.AORL01000024_gene193 8.317e-238 749.0 COG0277@1|root,COG0277@2|Bacteria,1MUPW@1224|Proteobacteria,2TUNK@28211|Alphaproteobacteria,2KCVP@204457|Sphingomonadales 204457|Sphingomonadales C FAD binding domain - - - - - - - - - - - - FAD_binding_4 QTD1_k127_3496299_12 1502770.JQMG01000001_gene1323 3.659e-34 138.0 2E3V1@1|root,32YSA@2|Bacteria,1N7HB@1224|Proteobacteria,2VWDQ@28216|Betaproteobacteria,2KNV4@206350|Nitrosomonadales 206350|Nitrosomonadales - - - - - - - - - - - - - - - QTD1_k127_3496299_6 1385517.N800_06185 5.226e-103 352.0 COG0652@1|root,COG0652@2|Bacteria,1QCY4@1224|Proteobacteria,1RY8D@1236|Gammaproteobacteria,1X4AR@135614|Xanthomonadales 135614|Xanthomonadales O peptidyl-prolyl cis-trans isomerase - - 5.2.1.8 ko:K01802 - - - - ko00000,ko01000 - - - Pro_isomerase QTD1_k127_3496299_15 1117647.M5M_03060 1.099e-22 106.0 2BUQS@1|root,32Q1V@2|Bacteria,1PJQ8@1224|Proteobacteria,1T6IW@1236|Gammaproteobacteria,1J77Z@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria S Protein of unknown function (DUF3106) - - - - - - - - - - - - DUF3106 QTD1_k127_3496299_11 243231.GSU0721 2.238e-45 172.0 COG1595@1|root,COG1595@2|Bacteria,1R9WC@1224|Proteobacteria,430GK@68525|delta/epsilon subdivisions,2WVVZ@28221|Deltaproteobacteria 28221|Deltaproteobacteria K Sigma-70, region 4 rpoE - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r4_2 QTD1_k127_3496299_1 187272.Mlg_2496 2.335e-221 708.0 COG1198@1|root,COG1198@2|Bacteria,1MUUZ@1224|Proteobacteria,1RPZ7@1236|Gammaproteobacteria,1WX60@135613|Chromatiales 135613|Chromatiales L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA priA - - ko:K04066 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C,ResIII QTD1_k127_3496299_2 1335757.SPICUR_01315 2.881e-196 660.0 COG0018@1|root,COG0018@2|Bacteria,1MU4J@1224|Proteobacteria,1RPRC@1236|Gammaproteobacteria,1WVYV@135613|Chromatiales 135613|Chromatiales J Arginyl-tRNA synthetase argS - 6.1.1.19 ko:K01887 ko00970,map00970 M00359,M00360 R03646 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - Arg_tRNA_synt_N,DALR_1,tRNA-synt_1d QTD1_k127_3496299_14 396588.Tgr7_0262 6.253e-29 128.0 COG3087@1|root,COG3087@2|Bacteria,1RCC0@1224|Proteobacteria,1SWTF@1236|Gammaproteobacteria,1WZTX@135613|Chromatiales 135613|Chromatiales D Sporulation related domain - - - - - - - - - - - - SPOR QTD1_k127_3496299_13 768704.Desmer_2708 5.262e-29 123.0 COG3070@1|root,COG3070@2|Bacteria,1W1DT@1239|Firmicutes,254ET@186801|Clostridia,26614@186807|Peptococcaceae 186801|Clostridia K PFAM TfoX N-terminal domain - - - ko:K07343 - - - - ko00000 - - - TfoX_N QTD1_k127_3496299_5 768671.ThimaDRAFT_2363 4.805e-134 441.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,1RRXX@1236|Gammaproteobacteria,1WXC2@135613|Chromatiales 135613|Chromatiales T response regulator receiver - - - ko:K13599 ko02020,map02020 M00498 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat QTD1_k127_3496299_4 187272.Mlg_2624 2.087e-178 587.0 COG5000@1|root,COG5000@2|Bacteria,1MWKZ@1224|Proteobacteria,1RQ8B@1236|Gammaproteobacteria,1WXE6@135613|Chromatiales 135613|Chromatiales T signal transduction histidine kinase - - - - - - - - - - - - HAMP,HATPase_c,HisKA,PAS_4,PAS_8 QTD1_k127_3496299_16 396588.Tgr7_0198 4.621e-20 104.0 29CX4@1|root,2ZZV8@2|Bacteria,1RFY7@1224|Proteobacteria,1SBT1@1236|Gammaproteobacteria,1WYAZ@135613|Chromatiales 135613|Chromatiales S Domain of unknown function (DUF4390) - - - - - - - - - - - - DUF4390 QTD1_k127_3496299_7 1283300.ATXB01000001_gene1103 4.166e-98 338.0 COG0144@1|root,COG0144@2|Bacteria,1MWPE@1224|Proteobacteria,1RN8X@1236|Gammaproteobacteria,1XE0K@135618|Methylococcales 135618|Methylococcales J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA - - 2.1.1.176 ko:K03500 - - - - ko00000,ko01000,ko03009 - - - Methyltr_RsmB-F,Methyltr_RsmF_N,NusB QTD1_k127_3496299_8 396588.Tgr7_0196 4.359e-95 326.0 COG0223@1|root,COG0223@2|Bacteria,1MU4Q@1224|Proteobacteria,1RP1T@1236|Gammaproteobacteria,1WWQE@135613|Chromatiales 135613|Chromatiales J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus fmt - 2.1.2.9 ko:K00604 ko00670,ko00970,map00670,map00970 - R03940 RC00026,RC00165 ko00000,ko00001,ko01000 - - - Formyl_trans_C,Formyl_trans_N QTD1_k127_3496299_10 1384054.N790_04970 3.566e-65 229.0 COG0242@1|root,COG0242@2|Bacteria,1RA2P@1224|Proteobacteria,1S247@1236|Gammaproteobacteria,1X4UT@135614|Xanthomonadales 135614|Xanthomonadales J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions def GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 ko:K01462 - - - - ko00000,ko01000 - - - Pep_deformylase QTD1_k127_3496299_9 1123257.AUFV01000021_gene2005 8.087e-77 273.0 COG1652@1|root,COG1652@2|Bacteria,1MUBV@1224|Proteobacteria,1RPMB@1236|Gammaproteobacteria,1X3I7@135614|Xanthomonadales 135614|Xanthomonadales S peptidoglycan-binding protein, lysm - - - - - - - - - - - - LysM QTD1_k127_3498856_5 1049564.TevJSym_ad00670 6.177e-40 154.0 COG4206@1|root,COG4206@2|Bacteria,1MW63@1224|Proteobacteria,1RMFJ@1236|Gammaproteobacteria,1J4YK@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria H COG4206 Outer membrane cobalamin receptor protein btuB GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0006810,GO:0006811,GO:0008150,GO:0015075,GO:0015267,GO:0015318,GO:0015889,GO:0015893,GO:0016020,GO:0016021,GO:0019904,GO:0022803,GO:0022838,GO:0022857,GO:0031224,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0050896,GO:0051179,GO:0051180,GO:0051181,GO:0051234,GO:0055085,GO:0071702,GO:0071705 - ko:K16092 - - - - ko00000,ko02000 1.B.14.3 - iECB_1328.ECB_03851,iECP_1309.ECP_4183,iSF_1195.SF4048,iS_1188.S3696 Plug,TonB_dep_Rec QTD1_k127_3498856_6 743721.Psesu_2221 7.229e-30 122.0 COG3296@1|root,COG3296@2|Bacteria,1N4ZK@1224|Proteobacteria,1RTU4@1236|Gammaproteobacteria,1X7NI@135614|Xanthomonadales 135614|Xanthomonadales S Domain of unknown function (DUF4870) - - - ko:K09940 - - - - ko00000 - - - DUF4870 QTD1_k127_3498856_1 1123368.AUIS01000031_gene1422 5.363e-130 424.0 COG1533@1|root,COG1533@2|Bacteria,1MW0H@1224|Proteobacteria,1RQNF@1236|Gammaproteobacteria 1236|Gammaproteobacteria L Radical SAM - - - - - - - - - - - - Radical_SAM QTD1_k127_3498856_4 1282876.BAOK01000001_gene2652 1.08e-46 177.0 COG0702@1|root,COG0702@2|Bacteria,1MZG7@1224|Proteobacteria,2UBX1@28211|Alphaproteobacteria,4BSIX@82117|unclassified Alphaproteobacteria 28211|Alphaproteobacteria GM NAD(P)H-binding - - - - - - - - - - - - NAD_binding_10 QTD1_k127_3498856_7 1123393.KB891332_gene2705 7.767e-23 100.0 2EH48@1|root,338P5@2|Bacteria,1NFS9@1224|Proteobacteria,2W6NA@28216|Betaproteobacteria,1KT6V@119069|Hydrogenophilales 119069|Hydrogenophilales - - - - - - - - - - - - - - - QTD1_k127_3498856_0 257310.BB4032 0.0 2462.0 COG0178@1|root,COG0178@2|Bacteria,1MW0W@1224|Proteobacteria,2VI87@28216|Betaproteobacteria,3T1BB@506|Alcaligenaceae 28216|Betaproteobacteria L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate uvrA2 - - ko:K03701 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - ABC_tran QTD1_k127_3498856_2 1122604.JONR01000016_gene4468 2.022e-124 408.0 COG3220@1|root,COG3220@2|Bacteria,1MURE@1224|Proteobacteria,1RQ9H@1236|Gammaproteobacteria,1X35S@135614|Xanthomonadales 135614|Xanthomonadales S Belongs to the UPF0276 family - - - ko:K09930 - - - - ko00000 - - - DUF692 QTD1_k127_3498856_3 1094715.CM001373_gene1841 1.824e-50 190.0 COG3219@1|root,COG3219@2|Bacteria,1MZS2@1224|Proteobacteria,1S9N6@1236|Gammaproteobacteria,1JGJ6@118969|Legionellales 118969|Legionellales S Putative DNA-binding domain - - - - - - - - - - - - DUF2063 QTD1_k127_3498856_8 366602.Caul_4907 2.255e-08 59.0 COG0031@1|root,COG0031@2|Bacteria,1MUBE@1224|Proteobacteria,2TT3E@28211|Alphaproteobacteria,2KFSB@204458|Caulobacterales 204458|Caulobacterales E Pyridoxal-phosphate dependent enzyme - - 4.2.1.22 ko:K01697 ko00260,ko00270,ko01100,ko01130,ko01230,map00260,map00270,map01100,map01130,map01230 M00035,M00338 R00891,R01290,R04942 RC00056,RC00069,RC00256,RC00489,RC01246 ko00000,ko00001,ko00002,ko01000 - - - CBS,PALP QTD1_k127_3513069_4 1121015.N789_00810 9.902e-117 384.0 COG0119@1|root,COG0119@2|Bacteria,1MUNQ@1224|Proteobacteria,1RMWE@1236|Gammaproteobacteria,1X3PI@135614|Xanthomonadales 135614|Xanthomonadales E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) leuA - 2.3.3.13 ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 M00432 R01213 RC00004,RC00470,RC02754 br01601,ko00000,ko00001,ko00002,ko01000 - - - HMGL-like,LeuA_dimer QTD1_k127_3513069_3 314292.VAS14_22552 1.784e-119 391.0 COG0115@1|root,COG0115@2|Bacteria,1MVB0@1224|Proteobacteria,1RP6Z@1236|Gammaproteobacteria,1XUBQ@135623|Vibrionales 135623|Vibrionales E Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family ilvE - 2.6.1.42 ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00036,M00119,M00570 R01090,R01214,R02199,R10991 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_4 QTD1_k127_3513069_0 326427.Cagg_1245 1.21e-205 651.0 COG0065@1|root,COG0065@2|Bacteria,2G68G@200795|Chloroflexi,3753P@32061|Chloroflexia 32061|Chloroflexia H Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate - - 4.2.1.33,4.2.1.35 ko:K01703 ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 M00432,M00535 R03896,R03898,R03968,R04001,R08620,R08624,R08628,R08634,R08641,R08645,R10170 RC00497,RC00976,RC00977,RC01041,RC01046,RC03072 br01601,ko00000,ko00001,ko00002,ko01000 - - - Aconitase QTD1_k127_3513069_5 404589.Anae109_1876 4.759e-75 262.0 COG0066@1|root,COG0066@2|Bacteria,1MVXB@1224|Proteobacteria,42QN7@68525|delta/epsilon subdivisions,2WP27@28221|Deltaproteobacteria,2YVXG@29|Myxococcales 28221|Deltaproteobacteria E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate leuD - 4.2.1.33,4.2.1.35 ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R03896,R03898,R03968,R04001,R10170 RC00976,RC00977,RC01041,RC01046,RC03072 br01601,ko00000,ko00001,ko00002,ko01000 - - - Aconitase_C QTD1_k127_3513069_2 378806.STAUR_3605 2.578e-140 464.0 COG0473@1|root,COG0473@2|Bacteria,1MUH4@1224|Proteobacteria,42M8G@68525|delta/epsilon subdivisions,2WIYB@28221|Deltaproteobacteria,2YUGJ@29|Myxococcales 28221|Deltaproteobacteria H Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate leuB GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R00994,R04426,R10052 RC00084,RC00417,RC03036 br01601,ko00000,ko00001,ko00002,ko01000 - - - Iso_dh QTD1_k127_3513069_1 1163409.UUA_04258 1.914e-156 503.0 COG0626@1|root,COG0626@2|Bacteria,1MU57@1224|Proteobacteria,1RMCV@1236|Gammaproteobacteria,1X4AH@135614|Xanthomonadales 135614|Xanthomonadales E cystathionine metB - 2.5.1.48 ko:K01739 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 M00017 R00999,R01288,R02508,R03217,R03260,R04944,R04945,R04946 RC00020,RC00056,RC00069,RC00420,RC02848,RC02866 ko00000,ko00001,ko00002,ko01000 - - - Cys_Met_Meta_PP QTD1_k127_3513069_6 1439940.BAY1663_04055 5.664e-05 47.0 COG3071@1|root,COG3071@2|Bacteria,1N8NX@1224|Proteobacteria,1SACE@1236|Gammaproteobacteria 1236|Gammaproteobacteria H COG0457 FOG TPR repeat - - - - - - - - - - - - TPR_16,TPR_19 QTD1_k127_3513069_7 1232410.KI421426_gene1441 0.000104 48.0 COG3063@1|root,COG3063@2|Bacteria,1QZ5S@1224|Proteobacteria,42XK8@68525|delta/epsilon subdivisions,2WSKB@28221|Deltaproteobacteria,43V3K@69541|Desulfuromonadales 28221|Deltaproteobacteria NU Tetratricopeptide repeat - - - - - - - - - - - - - QTD1_k127_3517348_1 1122604.JONR01000001_gene1798 3.256e-79 271.0 COG0845@1|root,COG0845@2|Bacteria,1NQZ0@1224|Proteobacteria,1S3MR@1236|Gammaproteobacteria,1X5HW@135614|Xanthomonadales 135614|Xanthomonadales M Biotin-lipoyl like - - - - - - - - - - - - HlyD_D23 QTD1_k127_3517348_0 1122604.JONR01000001_gene1799 0.0 1541.0 COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,1RQ6V@1236|Gammaproteobacteria,1XCET@135614|Xanthomonadales 135614|Xanthomonadales V AcrB/AcrD/AcrF family - - - - - - - - - - - - ACR_tran QTD1_k127_3517348_2 1123073.KB899243_gene698 4.061e-42 157.0 COG0076@1|root,COG0076@2|Bacteria,1MWUX@1224|Proteobacteria,1RQRJ@1236|Gammaproteobacteria,1X83S@135614|Xanthomonadales 135614|Xanthomonadales E Pyridoxal-dependent decarboxylase conserved domain - - - - - - - - - - - - Pyridoxal_deC QTD1_k127_3520200_12 398767.Glov_0546 0.0004237 48.0 COG4393@1|root,COG4393@2|Bacteria,1R507@1224|Proteobacteria,42NQA@68525|delta/epsilon subdivisions,2WQ0C@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Predicted membrane protein (DUF2318) - - - - - - - - - - - - DUF2318 QTD1_k127_3520200_8 1123320.KB889684_gene2323 1.342e-31 128.0 COG0189@1|root,COG0189@2|Bacteria,2HI2Z@201174|Actinobacteria 201174|Actinobacteria HJ ligase activity - - - - - - - - - - - - GSH-S_ATP QTD1_k127_3520200_7 1452718.JBOY01000123_gene1282 3.168e-42 162.0 COG0671@1|root,COG0671@2|Bacteria,1RJ1T@1224|Proteobacteria,1SAU1@1236|Gammaproteobacteria 1236|Gammaproteobacteria I COG0671 Membrane-associated phospholipid phosphatase - - 3.6.1.27 ko:K19302 ko00550,map00550 - R05627 RC00002 ko00000,ko00001,ko01000,ko01011 - - - PAP2 QTD1_k127_3520200_2 62928.azo0965 3.853e-129 423.0 COG0438@1|root,COG0438@2|Bacteria,1MUB7@1224|Proteobacteria,2VN6W@28216|Betaproteobacteria,2KVGJ@206389|Rhodocyclales 206389|Rhodocyclales M Glycosyltransferase Family 4 - - - ko:K00786 - - - - ko00000,ko01000 - - - Glyco_transf_4,Glycos_transf_1 QTD1_k127_3520200_5 1384054.N790_14080 1.153e-85 302.0 COG0429@1|root,COG0429@2|Bacteria,1MWV1@1224|Proteobacteria,1RN39@1236|Gammaproteobacteria,1X3GG@135614|Xanthomonadales 135614|Xanthomonadales S hydrolase of the alpha beta-hydrolase fold - - - ko:K07019 - - - - ko00000 - - - Abhydrolase_1,Abhydrolase_6,Hydrolase_4 QTD1_k127_3520200_11 670487.Ocepr_0458 5.166e-05 55.0 COG1664@1|root,COG1664@2|Bacteria,1WKED@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus M Integral membrane protein CcmA involved in cell shape determination - - - - - - - - - - - - Bactofilin QTD1_k127_3520200_10 1081640.AGFU01000003_gene1556 3.017e-06 58.0 COG3115@1|root,COG3115@2|Bacteria,1RJNQ@1224|Proteobacteria,2UC30@28211|Alphaproteobacteria,2K2NX@204457|Sphingomonadales 204457|Sphingomonadales D Sporulation related domain - - - - - - - - - - - - SPOR QTD1_k127_3520200_3 1049564.TevJSym_af00130 5.085e-107 356.0 COG0484@1|root,COG0484@2|Bacteria,1MUZ4@1224|Proteobacteria,1RP09@1236|Gammaproteobacteria,1J5VE@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria O DnaJ-class molecular chaperone cbpA GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0097159,GO:1901363 - ko:K05516 - - - - ko00000,ko03036,ko03110 - - - DnaJ,DnaJ_C QTD1_k127_3520200_9 1249627.D779_3900 9.357e-18 86.0 COG0789@1|root,COG0789@2|Bacteria,1N9MT@1224|Proteobacteria,1SE7J@1236|Gammaproteobacteria,1WZDM@135613|Chromatiales 135613|Chromatiales K MerR HTH family regulatory protein - - - ko:K18997 - - - - ko00000,ko03036 - - - MerR_2 QTD1_k127_3520200_6 292415.Tbd_0861 1.72e-47 181.0 COG3803@1|root,COG3803@2|Bacteria,1RHYI@1224|Proteobacteria,2VSHT@28216|Betaproteobacteria 28216|Betaproteobacteria S protein conserved in bacteria - - - - - - - - - - - - DUF924 QTD1_k127_3520200_0 1254432.SCE1572_33050 9.017e-188 606.0 COG0475@1|root,COG1226@1|root,COG0475@2|Bacteria,COG1226@2|Bacteria,1MV34@1224|Proteobacteria,42MEM@68525|delta/epsilon subdivisions,2WKYA@28221|Deltaproteobacteria,2YU1C@29|Myxococcales 28221|Deltaproteobacteria P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family kefB - - ko:K03455,ko:K11745,ko:K11747 - - - - ko00000,ko02000 2.A.37,2.A.37.1.1,2.A.37.1.2 - - Na_H_Exchanger,TrkA_N QTD1_k127_3520200_4 368407.Memar_1357 1.624e-90 308.0 COG0265@1|root,arCOG02833@2157|Archaea,2XT7Y@28890|Euryarchaeota,2NAWS@224756|Methanomicrobia 224756|Methanomicrobia O Trypsin - - - - - - - - - - - - PDZ_2,Trypsin_2 QTD1_k127_3520200_1 396588.Tgr7_3033 4.63e-185 590.0 COG0067@1|root,COG0069@1|root,COG0067@2|Bacteria,COG0069@2|Bacteria,1MU7B@1224|Proteobacteria,1RN2W@1236|Gammaproteobacteria,1WWAR@135613|Chromatiales 135613|Chromatiales E glutamate synthase - - 1.4.1.13,1.4.1.14 ko:K00265 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 - R00093,R00114,R00248 RC00006,RC00010,RC02799 ko00000,ko00001,ko01000 - - - GATase_2,GXGXG,Glu_syn_central,Glu_synthase QTD1_k127_3521913_1 62928.azo1000 7.519e-100 332.0 COG0277@1|root,COG0277@2|Bacteria,1MVYV@1224|Proteobacteria,2VHUQ@28216|Betaproteobacteria,2KUSX@206389|Rhodocyclales 206389|Rhodocyclales C FAD binding glcE - - ko:K11472 ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130 - R00475 RC00042 ko00000,ko00001 - - - FAD-oxidase_C,FAD_binding_4 QTD1_k127_3521913_0 1123073.KB899241_gene2557 1.044e-150 498.0 COG0247@1|root,COG0247@2|Bacteria,1MWTK@1224|Proteobacteria,1RPAB@1236|Gammaproteobacteria,1X6QS@135614|Xanthomonadales 135614|Xanthomonadales C Cysteine-rich domain - - - - - - - - - - - - CCG,Fer4_7 QTD1_k127_3521913_2 1303518.CCALI_00350 3.284e-71 258.0 COG1520@1|root,COG4733@1|root,COG1520@2|Bacteria,COG4733@2|Bacteria 2|Bacteria S cellulase activity - - - - - - - - - - - - CHB_HEX_C_1,F5_F8_type_C,Laminin_G_3,Lectin_legB,PKD,PQQ,PQQ_2,PQQ_3,RicinB_lectin_2,SLH,fn3 QTD1_k127_3529020_1 243233.MCA1599 4.353e-112 369.0 COG0265@1|root,COG0265@2|Bacteria,1MU63@1224|Proteobacteria,1RN9T@1236|Gammaproteobacteria,1XE25@135618|Methylococcales 1236|Gammaproteobacteria M Belongs to the peptidase S1C family - - 3.4.21.107 ko:K04771 ko01503,ko02020,map01503,map02020 M00728 - - ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 - - - PDZ_2,Trypsin_2 QTD1_k127_3529020_0 323848.Nmul_A0511 0.0 1201.0 COG0495@1|root,COG0495@2|Bacteria,1MV47@1224|Proteobacteria,2VH2J@28216|Betaproteobacteria,372EP@32003|Nitrosomonadales 28216|Betaproteobacteria J Belongs to the class-I aminoacyl-tRNA synthetase family leuS - 6.1.1.4 ko:K01869 ko00970,map00970 M00359,M00360 R03657 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - Anticodon_1,tRNA-synt_1,tRNA-synt_1_2 QTD1_k127_3529020_2 1437824.BN940_05761 1.932e-08 61.0 COG2980@1|root,COG2980@2|Bacteria,1N13K@1224|Proteobacteria,2VU54@28216|Betaproteobacteria,3T3ZS@506|Alcaligenaceae 28216|Betaproteobacteria M Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane lptE - - ko:K03643 - - - - ko00000,ko02000 1.B.42.1 - - LptE QTD1_k127_3531794_9 744979.R2A130_2239 5.587e-40 151.0 COG0404@1|root,COG0665@1|root,COG0404@2|Bacteria,COG0665@2|Bacteria,1MUXJ@1224|Proteobacteria,2TRGS@28211|Alphaproteobacteria 28211|Alphaproteobacteria E Belongs to the GcvT family dmgdh4 - 1.5.8.4 ko:K00315 ko00260,ko01100,map00260,map01100 - R01565 RC00181 ko00000,ko00001,ko01000 - - - DAO,FAO_M,GCV_T,GCV_T_C QTD1_k127_3531794_0 426117.M446_3866 0.0 1237.0 COG0404@1|root,COG0665@1|root,COG0404@2|Bacteria,COG0665@2|Bacteria,1MUXJ@1224|Proteobacteria,2TRGS@28211|Alphaproteobacteria,1JZ2F@119045|Methylobacteriaceae 28211|Alphaproteobacteria E FAD dependent oxidoreductase central domain sardh - 1.5.3.19 ko:K19191 ko00760,ko01120,map00760,map01120 - R10102 RC00060,RC00557 ko00000,ko00001,ko01000 - - - DAO,FAO_M,GCV_T,GCV_T_C QTD1_k127_3531794_2 1380391.JIAS01000014_gene2046 1.621e-239 749.0 COG5598@1|root,COG5598@2|Bacteria,1N18H@1224|Proteobacteria,2TRUE@28211|Alphaproteobacteria 28211|Alphaproteobacteria H COG5598 Trimethylamine corrinoid methyltransferase mttB2 - 2.1.1.250 ko:K14083 ko00680,ko01120,ko01200,map00680,map01120,map01200 M00563 R09124,R10016 RC00035,RC00732,RC01144,RC02984 ko00000,ko00001,ko00002,ko01000 - - - MTTB QTD1_k127_3531794_3 1411123.JQNH01000001_gene3809 3.656e-178 580.0 COG0161@1|root,COG0161@2|Bacteria,1MU2N@1224|Proteobacteria,2TQND@28211|Alphaproteobacteria 28211|Alphaproteobacteria E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family bioA - 2.6.1.18 ko:K00822 ko00280,ko00410,ko00640,ko01100,map00280,map00410,map00640,map01100 - R00907,R04187 RC00008,RC00062,RC00160 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_3 QTD1_k127_3531794_8 795666.MW7_1222 6.593e-68 239.0 COG1414@1|root,COG1414@2|Bacteria,1MUNW@1224|Proteobacteria,2VHT8@28216|Betaproteobacteria,1K3D9@119060|Burkholderiaceae 28216|Betaproteobacteria K Transcriptional regulator - - - ko:K19333 - - - - ko00000,ko03000 - - - HTH_IclR,IclR QTD1_k127_3531794_1 1216976.AX27061_3155 8.321e-261 816.0 COG0028@1|root,COG0028@2|Bacteria,1MWUB@1224|Proteobacteria,2VMC1@28216|Betaproteobacteria,3T5NB@506|Alcaligenaceae 28216|Betaproteobacteria EH Belongs to the TPP enzyme family xsc - 2.3.3.15 ko:K03852 ko00430,map00430 - R05651 RC02903,RC02909 ko00000,ko00001,ko01000 - - - TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N QTD1_k127_3531794_4 977880.RALTA_B1589 3.595e-166 558.0 COG1113@1|root,COG1113@2|Bacteria,1MUPS@1224|Proteobacteria,2VKBM@28216|Betaproteobacteria,1KFGA@119060|Burkholderiaceae 28216|Betaproteobacteria E GabA permease gabP - - ko:K11735 - - - - ko00000,ko02000 2.A.3.1.4,2.A.3.1.5 - - AA_permease QTD1_k127_3531794_6 105559.Nwat_2807 4.359e-83 302.0 COG0282@1|root,COG0282@2|Bacteria,1MW61@1224|Proteobacteria,1RMKB@1236|Gammaproteobacteria,1WWEE@135613|Chromatiales 135613|Chromatiales H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction ackA - 2.7.2.1 ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 M00357,M00579 R00315,R01353 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 - - - Acetate_kinase QTD1_k127_3531794_7 6500.XP_005099940.1 2.798e-73 257.0 COG0637@1|root,2QU58@2759|Eukaryota,39WII@33154|Opisthokonta,3BF9K@33208|Metazoa,3D4RC@33213|Bilateria 33208|Metazoa S Haloacid dehalogenase-like hydrolase - - 3.11.1.1 ko:K05306 ko00440,ko01100,ko01120,map00440,map01100,map01120 - R00747 RC00368 ko00000,ko00001,ko01000 - - - HAD_2 QTD1_k127_3531794_5 596153.Alide_4214 6.898e-144 459.0 COG0075@1|root,COG0075@2|Bacteria,1MWHJ@1224|Proteobacteria,2VKXZ@28216|Betaproteobacteria,4A9K4@80864|Comamonadaceae 28216|Betaproteobacteria H Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily phnW - 2.6.1.37 ko:K03430 ko00440,ko01100,ko01120,map00440,map01100,map01120 - R04152 RC00008,RC00062 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_5 QTD1_k127_3551406_1 870187.Thini_1602 6.586e-81 274.0 COG0552@1|root,COG0552@2|Bacteria,1MUDU@1224|Proteobacteria,1RNIN@1236|Gammaproteobacteria,4605U@72273|Thiotrichales 72273|Thiotrichales U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components ftsY - - ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2,3.A.5.7 - - SRP54,SRP54_N QTD1_k127_3551406_3 1049564.TevJSym_aa00860 5.955e-79 280.0 COG2884@1|root,COG2884@2|Bacteria,1MVQ4@1224|Proteobacteria,1RMZA@1236|Gammaproteobacteria,1J4E4@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria D cell division ftsE GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0019897,GO:0019898,GO:0030554,GO:0031234,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - ko:K09812 ko02010,map02010 M00256 - - ko00000,ko00001,ko00002,ko02000,ko03036 3.A.1.140 - - ABC_tran QTD1_k127_3551406_4 519989.ECTPHS_06602 4.848e-65 244.0 COG2177@1|root,COG2177@2|Bacteria,1MU65@1224|Proteobacteria,1RYBV@1236|Gammaproteobacteria,1WWEB@135613|Chromatiales 135613|Chromatiales D Part of the ABC transporter FtsEX involved in cellular division - - - ko:K09811 ko02010,map02010 M00256 - - ko00000,ko00001,ko00002,ko02000,ko03036 3.A.1.140 - - FtsX QTD1_k127_3551406_2 1095769.CAHF01000012_gene3414 1.997e-80 279.0 COG1686@1|root,COG1686@2|Bacteria,1MWZA@1224|Proteobacteria,2VH1S@28216|Betaproteobacteria,47397@75682|Oxalobacteraceae 28216|Betaproteobacteria M Belongs to the peptidase S11 family pbpG - - ko:K07262 - - - - ko00000,ko01000,ko01002,ko01011 - - - Peptidase_S11 QTD1_k127_3551406_5 1121920.AUAU01000006_gene301 1.072e-48 180.0 2BYAB@1|root,32R2Z@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - QTD1_k127_3551406_0 1205753.A989_09551 2.431e-100 334.0 COG0568@1|root,COG0568@2|Bacteria,1MVWR@1224|Proteobacteria,1RMFR@1236|Gammaproteobacteria,1X3U9@135614|Xanthomonadales 135614|Xanthomonadales K RNA polymerase sigma factor RpoH rpoH - - ko:K03089 - - - - ko00000,ko03021 - - - Sigma70_r1_2,Sigma70_r2,Sigma70_r4 QTD1_k127_3557292_0 331869.BAL199_24044 1.79e-164 533.0 COG1024@1|root,COG1250@1|root,COG1024@2|Bacteria,COG1250@2|Bacteria,1MU9P@1224|Proteobacteria,2TS8E@28211|Alphaproteobacteria,4BR7T@82117|unclassified Alphaproteobacteria 28211|Alphaproteobacteria I 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain - - 1.1.1.35,4.2.1.17,5.1.2.3 ko:K01782,ko:K07516 ko00071,ko00280,ko00281,ko00310,ko00362,ko00380,ko00410,ko00640,ko00650,ko00903,ko00930,ko01040,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00071,map00280,map00281,map00310,map00362,map00380,map00410,map00640,map00650,map00903,map00930,map01040,map01100,map01110,map01120,map01130,map01200,map01212 M00032,M00087 R01975,R03026,R03045,R03276,R04137,R04170,R04203,R04204,R04224,R04737,R04738,R04739,R04740,R04741,R04743,R04744,R04745,R04746,R04748,R04749,R05066,R05305,R06411,R06412,R06941,R06942,R07935,R07951,R08093,R08094 RC00029,RC00099,RC00117,RC00241,RC00525,RC00831,RC00834,RC00896,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115 ko00000,ko00001,ko00002,ko01000 - - - 3HCDH,3HCDH_N,ECH_1 QTD1_k127_3557292_1 1144275.COCOR_05913 1.747e-154 506.0 COG0457@1|root,COG0457@2|Bacteria,1N0A9@1224|Proteobacteria,42YQ0@68525|delta/epsilon subdivisions,2WTRV@28221|Deltaproteobacteria,2YUFX@29|Myxococcales 28221|Deltaproteobacteria S COG0457 FOG TPR repeat - - - - - - - - - - - - - QTD1_k127_3560139_4 1125973.JNLC01000017_gene3725 4.218e-17 91.0 COG0736@1|root,COG0736@2|Bacteria,1MZBF@1224|Proteobacteria,2U77S@28211|Alphaproteobacteria,3JY1K@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein acpS - 2.7.8.7 ko:K00997 ko00770,map00770 - R01625 RC00002 ko00000,ko00001,ko01000 - - - ACPS QTD1_k127_3560139_1 592316.Pat9b_2970 2.45e-87 308.0 COG0854@1|root,COG0854@2|Bacteria,1MU9W@1224|Proteobacteria,1RMS5@1236|Gammaproteobacteria,3VZF7@53335|Pantoea 1236|Gammaproteobacteria H Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate pdxJ GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 ko:K03474 ko00750,ko01100,map00750,map01100 M00124 R05838 RC01476 ko00000,ko00001,ko00002,ko01000 - - iAF1260.b2564,iB21_1397.B21_02422,iBWG_1329.BWG_2328,iEC55989_1330.EC55989_2852,iECBD_1354.ECBD_1117,iECB_1328.ECB_02458,iECDH10B_1368.ECDH10B_2732,iECDH1ME8569_1439.ECDH1ME8569_2491,iECD_1391.ECD_02458,iECH74115_1262.ECH74115_3800,iECIAI1_1343.ECIAI1_2675,iECO103_1326.ECO103_3142,iECO111_1330.ECO111_3290,iECO26_1355.ECO26_3611,iECSE_1348.ECSE_2852,iECSP_1301.ECSP_3509,iECW_1372.ECW_m2792,iECs_1301.ECs3430,iEKO11_1354.EKO11_1169,iEcDH1_1363.EcDH1_1104,iEcE24377_1341.EcE24377A_2850,iEcHS_1320.EcHS_A2719,iEcolC_1368.EcolC_1113,iG2583_1286.G2583_3145,iJO1366.b2564,iJR904.b2564,iWFL_1372.ECW_m2792,iY75_1357.Y75_RS13390 PdxJ QTD1_k127_3560139_3 666685.R2APBS1_2232 4.526e-44 173.0 COG1381@1|root,COG1381@2|Bacteria,1RHIC@1224|Proteobacteria,1RN8Y@1236|Gammaproteobacteria,1X30R@135614|Xanthomonadales 135614|Xanthomonadales L Involved in DNA repair and RecF pathway recombination recO - - ko:K03584 ko03440,map03440 - - - ko00000,ko00001,ko03400 - - - RecO_C,RecO_N QTD1_k127_3560139_0 349124.Hhal_0033 1.741e-96 327.0 COG1159@1|root,COG1159@2|Bacteria,1MUKT@1224|Proteobacteria,1RN3A@1236|Gammaproteobacteria,1WW0G@135613|Chromatiales 135613|Chromatiales J An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism era - - ko:K03595 - - - - ko00000,ko03009,ko03029 - - - KH_2,MMR_HSR1 QTD1_k127_3560139_2 550540.Fbal_0730 1.248e-63 228.0 COG0571@1|root,COG0571@2|Bacteria,1MUQ6@1224|Proteobacteria,1RN0C@1236|Gammaproteobacteria 1236|Gammaproteobacteria J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism rnc GO:0000287,GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016072,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019899,GO:0022613,GO:0032296,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 ko:K03685 ko03008,ko05205,map03008,map05205 - - - ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 - - - Ribonucleas_3_3,dsrm QTD1_k127_3560139_6 1123253.AUBD01000006_gene812 1.637e-10 68.0 COG4969@1|root,COG4969@2|Bacteria,1N71K@1224|Proteobacteria,1SCYD@1236|Gammaproteobacteria,1X8J8@135614|Xanthomonadales 135614|Xanthomonadales NU Domain of unknown function (DUF4845) - - - - - - - - - - - - DUF4845 QTD1_k127_3560139_5 765912.Thimo_1828 4.158e-12 66.0 COG0681@1|root,COG0681@2|Bacteria,1MXUF@1224|Proteobacteria,1RMHI@1236|Gammaproteobacteria,1WXAU@135613|Chromatiales 135613|Chromatiales U Belongs to the peptidase S26 family - - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24,Peptidase_S26 QTD1_k127_3609131_1 1267534.KB906755_gene4521 5.466e-250 788.0 COG0366@1|root,COG0366@2|Bacteria,3Y3QT@57723|Acidobacteria,2JI2C@204432|Acidobacteriia 204432|Acidobacteriia G Alpha-amylase domain - - 3.2.1.20 ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 - R00028,R00801,R00802,R06087,R06088 RC00028,RC00049,RC00077 ko00000,ko00001,ko01000 - GH31 - Alpha-amylase,DUF3459 QTD1_k127_3609131_4 1163408.UU9_16471 2.206e-213 673.0 COG2211@1|root,COG2211@2|Bacteria,1MX4Z@1224|Proteobacteria,1RRNW@1236|Gammaproteobacteria,1X5B8@135614|Xanthomonadales 135614|Xanthomonadales G Major facilitator superfamily - - - ko:K16211 - - - - ko00000,ko02000 2.A.2.6 - - MFS_1 QTD1_k127_3609131_10 582402.Hbal_1824 2.902e-05 53.0 2ECZR@1|root,336WR@2|Bacteria,1NBK6@1224|Proteobacteria,2UGZR@28211|Alphaproteobacteria,43YM2@69657|Hyphomonadaceae 28211|Alphaproteobacteria - - - - - - - - - - - - - - DUF3313 QTD1_k127_3609131_7 685778.AORL01000021_gene831 3.993e-136 443.0 COG1609@1|root,COG1609@2|Bacteria,1MW7E@1224|Proteobacteria,2TV4Q@28211|Alphaproteobacteria,2K0IK@204457|Sphingomonadales 204457|Sphingomonadales K COG1609 Transcriptional regulators - - - - - - - - - - - - LacI,Peripla_BP_3 QTD1_k127_3609131_0 1123487.KB892868_gene1289 1.401e-290 919.0 COG1523@1|root,COG1523@2|Bacteria,1MU19@1224|Proteobacteria,2VH8E@28216|Betaproteobacteria 28216|Betaproteobacteria G Belongs to the glycosyl hydrolase 13 family pulA - - - - - - - - - - - Alpha-amylase,CBM_48,DUF3372,PUD QTD1_k127_3609131_9 1379698.RBG1_1C00001G0762 1.006e-14 76.0 2EMPS@1|root,33FC7@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - QTD1_k127_3609131_2 1449076.JOOE01000004_gene35 1.628e-239 762.0 COG0366@1|root,COG0366@2|Bacteria,1MVKX@1224|Proteobacteria,2TRS3@28211|Alphaproteobacteria,2K1CG@204457|Sphingomonadales 204457|Sphingomonadales G Alpha-amylase domain - - 3.2.1.20 ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 - R00028,R00801,R00802,R06087,R06088 RC00028,RC00049,RC00077 ko00000,ko00001,ko01000 - GH31 - Alpha-amylase,DUF3459 QTD1_k127_3609131_3 685778.AORL01000021_gene829 9.11e-232 733.0 COG0366@1|root,COG0366@2|Bacteria,1MU90@1224|Proteobacteria,2U0DP@28211|Alphaproteobacteria,2K0HA@204457|Sphingomonadales 204457|Sphingomonadales G Alpha-amylase domain - - - - - - - - - - - - Alpha-amylase,Malt_amylase_C QTD1_k127_3609131_8 1280954.HPO_02317 2.318e-15 83.0 2ECZR@1|root,336WR@2|Bacteria,1NBK6@1224|Proteobacteria,2UGZR@28211|Alphaproteobacteria,43YM2@69657|Hyphomonadaceae 28211|Alphaproteobacteria - - - - - - - - - - - - - - DUF3313 QTD1_k127_3609131_5 1500894.JQNN01000001_gene2755 3.991e-158 534.0 COG1629@1|root,COG1629@2|Bacteria,1MWTT@1224|Proteobacteria 1224|Proteobacteria P COG1629 Outer membrane receptor proteins, mostly Fe transport - - - - - - - - - - - - Plug,TonB_dep_Rec QTD1_k127_3609131_6 1198452.Jab_2c25950 5.826e-147 473.0 COG0665@1|root,COG0665@2|Bacteria,1MU40@1224|Proteobacteria,2VSIK@28216|Betaproteobacteria,476VS@75682|Oxalobacteraceae 28216|Betaproteobacteria E Tryptophan halogenase - - 1.14.19.9 ko:K14266 ko00404,ko01130,map00404,map01130 M00789,M00790 R09570 RC00949 ko00000,ko00001,ko00002,ko01000 - - - Trp_halogenase QTD1_k127_3619040_1 1449049.JONW01000005_gene1013 3.132e-222 719.0 COG1629@1|root,COG1629@2|Bacteria,1QUTW@1224|Proteobacteria,2TW7F@28211|Alphaproteobacteria,2KFR5@204458|Caulobacterales 204458|Caulobacterales P receptor - - - - - - - - - - - - Plug,TonB_dep_Rec QTD1_k127_3619040_0 1163409.UUA_08301 1.426e-269 848.0 COG0457@1|root,COG0457@2|Bacteria,1MVMG@1224|Proteobacteria,1RU5N@1236|Gammaproteobacteria,1X3GK@135614|Xanthomonadales 135614|Xanthomonadales S COG0457 FOG TPR repeat - - - - - - - - - - - - Sulfotransfer_3,TPR_16,TPR_19,TPR_8 QTD1_k127_3619040_4 1415755.JQLV01000001_gene3249 1.517e-121 407.0 COG0010@1|root,COG0010@2|Bacteria,1MVFH@1224|Proteobacteria,1RMH5@1236|Gammaproteobacteria,1XHZF@135619|Oceanospirillales 135619|Oceanospirillales E Belongs to the arginase family - - 3.5.3.11,3.5.3.17 ko:K01480,ko:K18459 ko00330,ko01100,map00330,map01100 M00133 R01157 RC00024,RC00329 ko00000,ko00001,ko00002,ko01000 - - - Arginase QTD1_k127_3619040_3 1121028.ARQE01000008_gene2265 2.712e-146 471.0 COG1172@1|root,COG1172@2|Bacteria,1MX7D@1224|Proteobacteria,2TVBH@28211|Alphaproteobacteria 28211|Alphaproteobacteria G Belongs to the binding-protein-dependent transport system permease family mglC - - ko:K10440,ko:K17214 ko02010,map02010 M00212,M00593 - - ko00000,ko00001,ko00002,ko02000 3.A.1.2,3.A.1.2.1,3.A.1.2.13,3.A.1.2.19 - - BPD_transp_2 QTD1_k127_3619040_2 269482.Bcep1808_1389 4.007e-190 606.0 COG1129@1|root,COG1129@2|Bacteria,1MU22@1224|Proteobacteria,2VHRA@28216|Betaproteobacteria,1JZXK@119060|Burkholderiaceae 28216|Betaproteobacteria P import. Responsible for energy coupling to the transport system - - - ko:K17215 ko02010,map02010 M00593 - - ko00000,ko00001,ko00002,ko02000 3.A.1.2 - - ABC_tran QTD1_k127_3619040_6 1449065.JMLL01000001_gene4125 1.21e-101 340.0 COG1879@1|root,COG1879@2|Bacteria,1MWGU@1224|Proteobacteria,2U2E3@28211|Alphaproteobacteria,43IDF@69277|Phyllobacteriaceae 28211|Alphaproteobacteria G ABC-type sugar transport system periplasmic component mglB - - ko:K10439,ko:K17213 ko02010,ko02030,map02010,map02030 M00212,M00593 - - ko00000,ko00001,ko00002,ko02000 3.A.1.2,3.A.1.2.1,3.A.1.2.13,3.A.1.2.19 - - Peripla_BP_4 QTD1_k127_3619040_7 649349.Lbys_3312 4.636e-12 74.0 2CDAN@1|root,3134Z@2|Bacteria,4NNX4@976|Bacteroidetes,47QRQ@768503|Cytophagia 976|Bacteroidetes S Gluconate 2-dehydrogenase subunit 3 - - - - - - - - - - - - Gluconate_2-dh3 QTD1_k127_3619040_5 1379270.AUXF01000005_gene540 1.308e-104 346.0 COG2303@1|root,COG2303@2|Bacteria,1ZSZW@142182|Gemmatimonadetes 142182|Gemmatimonadetes E GMC oxidoreductase - - - - - - - - - - - - GMC_oxred_C,GMC_oxred_N QTD1_k127_3694577_0 1122132.AQYH01000004_gene1642 1.345e-117 383.0 COG0573@1|root,COG0573@2|Bacteria,1MVKP@1224|Proteobacteria,2TQU1@28211|Alphaproteobacteria,4BBGP@82115|Rhizobiaceae 28211|Alphaproteobacteria P probably responsible for the translocation of the substrate across the membrane pstC - - ko:K02037 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - BPD_transp_1 QTD1_k127_3694577_2 266835.14023948 2.42e-105 362.0 COG0581@1|root,COG0581@2|Bacteria,1MUWB@1224|Proteobacteria,2TQYQ@28211|Alphaproteobacteria 28211|Alphaproteobacteria P phosphate transport system permease pstA GO:0003674,GO:0005215,GO:0005315,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0010921,GO:0015291,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0019220,GO:0019222,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0031323,GO:0033554,GO:0034220,GO:0035303,GO:0035435,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051174,GO:0051179,GO:0051234,GO:0051336,GO:0051716,GO:0055085,GO:0065007,GO:0065009,GO:0071944,GO:0098656,GO:0098660,GO:0098661 - ko:K02038 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - BPD_transp_1 QTD1_k127_3694577_1 637389.Acaty_c0820 4.395e-107 370.0 COG1117@1|root,COG1117@2|Bacteria,1MU16@1224|Proteobacteria,1RNUF@1236|Gammaproteobacteria,2NC0R@225057|Acidithiobacillales 225057|Acidithiobacillales P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system pstB - 3.6.3.27 ko:K02036 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.7 - - ABC_tran QTD1_k127_3704386_13 324602.Caur_2258 3.02e-21 95.0 COG1926@1|root,COG1926@2|Bacteria,2G6YN@200795|Chloroflexi,3776G@32061|Chloroflexia 32061|Chloroflexia F Phosphoribosyl transferase domain - - - - - - - - - - - - Pribosyltran QTD1_k127_3704386_6 349163.Acry_2057 4.285e-143 467.0 COG1488@1|root,COG1488@2|Bacteria,1Q4ET@1224|Proteobacteria,2VAWP@28211|Alphaproteobacteria,2JVPJ@204441|Rhodospirillales 204441|Rhodospirillales H Nicotinate phosphoribosyltransferase (NAPRTase) family - - 6.3.4.21 ko:K00763 ko00760,ko01100,map00760,map01100 - R01724 RC00033 ko00000,ko00001,ko01000 - - - - QTD1_k127_3704386_1 518766.Rmar_0342 4.422e-209 668.0 COG0209@1|root,COG0209@2|Bacteria,4NEHQ@976|Bacteroidetes,1FJVJ@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes F Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen nrd - 1.17.4.1 ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R02017,R02018,R02019,R02024 RC00613 ko00000,ko00001,ko00002,ko01000,ko03400 - - - Ribonuc_red_lgC,Ribonuc_red_lgN QTD1_k127_3704386_3 1301098.PKB_3926 3.49e-177 574.0 COG1387@1|root,COG1387@2|Bacteria,1MYXV@1224|Proteobacteria 1224|Proteobacteria E Belongs to the PHP family dpx - - ko:K02347 - - - - ko00000,ko03400 - - - DNA_pol_B_palm,DNA_pol_B_thumb,HHH_5,HHH_8,PHP QTD1_k127_3704386_14 243233.MCA2737 4.616e-20 96.0 2E600@1|root,330PC@2|Bacteria,1N9V9@1224|Proteobacteria,1SHAU@1236|Gammaproteobacteria,1XFBV@135618|Methylococcales 135618|Methylococcales - - - - - - - - - - - - - - - QTD1_k127_3704386_12 1116369.KB890024_gene1232 4.997e-26 115.0 arCOG05203@1|root,31A0K@2|Bacteria,1RHZR@1224|Proteobacteria,2U9JR@28211|Alphaproteobacteria 28211|Alphaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_3704386_11 472759.Nhal_2244 3.88e-55 199.0 COG1544@1|root,COG1544@2|Bacteria,1RJ55@1224|Proteobacteria,1S5AA@1236|Gammaproteobacteria,1X0WB@135613|Chromatiales 135613|Chromatiales J PFAM Cold-shock protein, DNA-binding - - - - - - - - - - - - CSD,Ribosomal_S30AE QTD1_k127_3704386_15 631362.Thi970DRAFT_03875 3.885e-10 64.0 2DQWF@1|root,3392H@2|Bacteria,1N93V@1224|Proteobacteria,1SFNS@1236|Gammaproteobacteria,1WZ6Y@135613|Chromatiales 135613|Chromatiales S Protein of unknown function (DUF2934) - - - - - - - - - - - - DUF2934 QTD1_k127_3704386_7 1158292.JPOE01000002_gene1873 9.097e-124 409.0 COG0845@1|root,COG0845@2|Bacteria,1MU8D@1224|Proteobacteria,2VH9K@28216|Betaproteobacteria,1KJCP@119065|unclassified Burkholderiales 28216|Betaproteobacteria M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K02005 - - - - ko00000 - - - HlyD_D23 QTD1_k127_3704386_0 1158292.JPOE01000002_gene1874 1.792e-317 987.0 COG0577@1|root,COG1136@1|root,COG0577@2|Bacteria,COG1136@2|Bacteria,1MU45@1224|Proteobacteria,2VHZ2@28216|Betaproteobacteria,1KPMQ@119065|unclassified Burkholderiales 28216|Betaproteobacteria V membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides macB - - ko:K02003,ko:K05685 ko02010,map02010 M00258,M00709 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.122.1,3.A.1.122.12 - - ABC_tran,FtsX,MacB_PCD QTD1_k127_3704386_9 1123257.AUFV01000005_gene1306 3.153e-76 267.0 2DBS0@1|root,2ZANT@2|Bacteria,1R8Y3@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - QTD1_k127_3704386_4 1123257.AUFV01000005_gene1303 1.254e-169 539.0 COG1262@1|root,COG1262@2|Bacteria,1R59H@1224|Proteobacteria 1224|Proteobacteria S Sulfatase-modifying factor enzyme 1 - - - - - - - - - - - - FGE-sulfatase QTD1_k127_3704386_2 1123256.KB907931_gene2742 2.147e-183 596.0 2C4HX@1|root,2Z9XP@2|Bacteria,1MY22@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - QTD1_k127_3704386_10 483219.LILAB_13365 2.724e-71 252.0 COG0382@1|root,COG0560@1|root,COG0382@2|Bacteria,COG0560@2|Bacteria,1MXCM@1224|Proteobacteria,42PWM@68525|delta/epsilon subdivisions,2WK8M@28221|Deltaproteobacteria,2YVRZ@29|Myxococcales 28221|Deltaproteobacteria EH UbiA prenyltransferase family - - - - - - - - - - - - HAD,UbiA QTD1_k127_3704386_5 1123256.KB907931_gene2752 2.855e-160 511.0 COG0451@1|root,COG0451@2|Bacteria,1P603@1224|Proteobacteria,1RQ2R@1236|Gammaproteobacteria,1X41X@135614|Xanthomonadales 135614|Xanthomonadales M 3-beta hydroxysteroid dehydrogenase - - - - - - - - - - - - Epimerase QTD1_k127_3704386_8 748247.AZKH_1496 8.31e-79 277.0 COG0462@1|root,COG0462@2|Bacteria,1R2XV@1224|Proteobacteria,2VMHX@28216|Betaproteobacteria,2KW10@206389|Rhodocyclales 2|Bacteria EF Ribose-phosphate pyrophosphokinase prs - 2.7.6.1 ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 M00005 R01049 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - Pribosyl_synth,Pribosyltran,Pribosyltran_N QTD1_k127_3745174_1 1384056.N787_01140 3.987e-171 545.0 COG0458@1|root,COG0458@2|Bacteria,1MUDZ@1224|Proteobacteria,1RPIU@1236|Gammaproteobacteria,1X3MZ@135614|Xanthomonadales 135614|Xanthomonadales F Four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate carB GO:0000050,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.5.5 ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - - CPSase_L_D2,CPSase_L_D3,MGS QTD1_k127_3745174_2 1301098.PKB_4983 1.861e-167 535.0 COG0505@1|root,COG0505@2|Bacteria,1MUB9@1224|Proteobacteria,1RMAW@1236|Gammaproteobacteria 1236|Gammaproteobacteria F Belongs to the CarA family carA GO:0000050,GO:0003674,GO:0003824,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005951,GO:0006082,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0032991,GO:0034641,GO:0034654,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046394,GO:0046483,GO:0055086,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - iAPECO1_1312.APECO1_1950,iUTI89_1310.UTI89_C0036,ic_1306.c0040 CPSase_sm_chain,GATase QTD1_k127_3745174_9 717785.HYPMC_4636 1.095e-57 211.0 COG0289@1|root,COG0289@2|Bacteria,1MUCT@1224|Proteobacteria,2TSFJ@28211|Alphaproteobacteria,3N62S@45401|Hyphomicrobiaceae 28211|Alphaproteobacteria E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate dapB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R04198,R04199 RC00478 ko00000,ko00001,ko00002,ko01000 - - - DapB_C,DapB_N QTD1_k127_3745174_3 396588.Tgr7_0973 9.88e-152 488.0 COG0484@1|root,COG0484@2|Bacteria,1MVMS@1224|Proteobacteria,1RNHY@1236|Gammaproteobacteria,1WWEM@135613|Chromatiales 135613|Chromatiales O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins dnaJ - - ko:K03686 - - - - ko00000,ko03029,ko03110 - - - DnaJ,DnaJ_C,DnaJ_CXXCXGXG QTD1_k127_3745174_0 713586.KB900536_gene3031 9.773e-317 980.0 COG0443@1|root,COG0443@2|Bacteria,1MVEN@1224|Proteobacteria,1RMDD@1236|Gammaproteobacteria,1WVW2@135613|Chromatiales 135613|Chromatiales O Heat shock 70 kDa protein dnaK - - ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 - - - ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 1.A.33.1 - - HSP70 QTD1_k127_3745174_10 519989.ECTPHS_06967 7.588e-41 157.0 COG0576@1|root,COG0576@2|Bacteria,1RH8T@1224|Proteobacteria,1S5W5@1236|Gammaproteobacteria,1WY2F@135613|Chromatiales 135613|Chromatiales O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ grpE - - ko:K03687 - - - - ko00000,ko03029,ko03110 - - - GrpE QTD1_k127_3745174_5 713586.KB900536_gene3029 6.495e-115 381.0 COG1420@1|root,COG1420@2|Bacteria,1MVX4@1224|Proteobacteria,1RR2F@1236|Gammaproteobacteria,1WXB7@135613|Chromatiales 135613|Chromatiales K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons hrcA - - ko:K03705 - - - - ko00000,ko03000 - - - HrcA,HrcA_DNA-bdg QTD1_k127_3745174_6 713586.KB900536_gene3028 2.791e-73 256.0 COG0061@1|root,COG0061@2|Bacteria,1MUBC@1224|Proteobacteria,1RP84@1236|Gammaproteobacteria,1WXJR@135613|Chromatiales 135613|Chromatiales G Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP nadK - 2.7.1.23 ko:K00858 ko00760,ko01100,map00760,map01100 - R00104 RC00002,RC00078 ko00000,ko00001,ko01000 - - - NAD_kinase QTD1_k127_3745174_4 998674.ATTE01000001_gene2757 7.722e-133 451.0 COG0497@1|root,COG0497@2|Bacteria,1MUNP@1224|Proteobacteria,1RNPZ@1236|Gammaproteobacteria,45ZYF@72273|Thiotrichales 72273|Thiotrichales L May be involved in recombinational repair of damaged DNA recN - - ko:K03631 - - - - ko00000,ko03400 - - - SMC_N QTD1_k127_3745174_8 713586.KB900536_gene3026 1.02e-61 215.0 COG0735@1|root,COG0735@2|Bacteria,1RDWJ@1224|Proteobacteria,1S4H7@1236|Gammaproteobacteria,1WYAR@135613|Chromatiales 135613|Chromatiales K Belongs to the Fur family fur - - ko:K03711 - - - - ko00000,ko03000 - - - FUR QTD1_k127_3745174_13 511062.GU3_07200 3.937e-23 103.0 COG2913@1|root,COG2913@2|Bacteria,1N6YW@1224|Proteobacteria,1SCTT@1236|Gammaproteobacteria,1Y4RM@135624|Aeromonadales 135624|Aeromonadales J Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane bamE - - ko:K06186 - - - - ko00000,ko02000 1.B.33.1 - - SmpA_OmlA QTD1_k127_3745174_14 1168067.JAGP01000001_gene1296 2.977e-09 69.0 COG2914@1|root,COG2914@2|Bacteria,1MZCH@1224|Proteobacteria,1SCHG@1236|Gammaproteobacteria,4614M@72273|Thiotrichales 72273|Thiotrichales S Belongs to the UPF0125 (RnfH) family - - - ko:K09801 - - - - ko00000 - - - Ub-RnfH QTD1_k127_3745174_11 754477.Q7C_174 4.332e-34 135.0 COG2867@1|root,COG2867@2|Bacteria,1RGUH@1224|Proteobacteria,1S61C@1236|Gammaproteobacteria,4611H@72273|Thiotrichales 72273|Thiotrichales I Polyketide cyclase dehydrase and lipid transport - - - - - - - - - - - - Polyketide_cyc QTD1_k127_3745174_7 1279019.ARQK01000018_gene2548 5.267e-64 222.0 COG0691@1|root,COG0691@2|Bacteria,1RDFP@1224|Proteobacteria,1S3PT@1236|Gammaproteobacteria,1WX50@135613|Chromatiales 135613|Chromatiales O the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA smpB - - ko:K03664 - - - - ko00000 - - - SmpB QTD1_k127_3745174_12 396588.Tgr7_1500 8.43e-33 134.0 2E849@1|root,332I1@2|Bacteria,1NIKS@1224|Proteobacteria,1SR25@1236|Gammaproteobacteria,1X10C@135613|Chromatiales 135613|Chromatiales S LAGLIDADG-like domain - - - - - - - - - - - - LAGLIDADG_3 QTD1_k127_3758148_6 391600.ABRU01000040_gene1863 1.34e-138 452.0 COG0477@1|root,COG2814@2|Bacteria,1QUAS@1224|Proteobacteria,2TWE2@28211|Alphaproteobacteria,2KHJN@204458|Caulobacterales 204458|Caulobacterales EGP Major Facilitator Superfamily - - - - - - - - - - - - MFS_1 QTD1_k127_3758148_21 261292.Nit79A3_0421 3.13e-08 62.0 2EB0T@1|root,3351P@2|Bacteria,1NCHM@1224|Proteobacteria,2WBFI@28216|Betaproteobacteria,373DI@32003|Nitrosomonadales 28216|Betaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_3758148_0 1122604.JONR01000002_gene1622 0.0 1094.0 COG0567@1|root,COG0567@2|Bacteria,1MVBF@1224|Proteobacteria,1RN8K@1236|Gammaproteobacteria,1X4NM@135614|Xanthomonadales 135614|Xanthomonadales C E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate sucA - 1.2.4.2 ko:K00164 ko00020,ko00310,ko00380,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map00380,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00032 R00621,R01933,R01940,R03316,R08549 RC00004,RC00027,RC00627,RC02743,RC02833,RC02883 br01601,ko00000,ko00001,ko00002,ko01000 - - - 2-oxogl_dehyd_N,E1_dh,OxoGdeHyase_C,Transket_pyr QTD1_k127_3758148_5 1260251.SPISAL_00380 6.671e-145 477.0 COG0508@1|root,COG0508@2|Bacteria,1MUJD@1224|Proteobacteria,1RME0@1236|Gammaproteobacteria,1WXGA@135613|Chromatiales 135613|Chromatiales C The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) - - 2.3.1.61 ko:K00658 ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00032 R02570,R02571,R08549 RC00004,RC02727,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - 2-oxoacid_dh,Biotin_lipoyl,E3_binding QTD1_k127_3758148_3 1123073.KB899245_gene48 2.098e-177 570.0 COG1249@1|root,COG1249@2|Bacteria,1MU2U@1224|Proteobacteria,1RMFF@1236|Gammaproteobacteria,1X3A1@135614|Xanthomonadales 135614|Xanthomonadales C E3 component of 2-oxoglutarate dehydrogenase complex ldp - 1.8.1.4 ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00036,M00307,M00532 R00209,R01221,R01698,R03815,R07618,R08549 RC00004,RC00022,RC00583,RC02742,RC02833,RC02834 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 - - - Pyr_redox_2,Pyr_redox_dim QTD1_k127_3758148_2 1123253.AUBD01000010_gene2106 7.048e-189 623.0 COG0317@1|root,COG0317@2|Bacteria,1MU44@1224|Proteobacteria,1RN3H@1236|Gammaproteobacteria,1X3FJ@135614|Xanthomonadales 135614|Xanthomonadales KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance relA - 2.7.6.5 ko:K00951 ko00230,map00230 - R00429 RC00002,RC00078 ko00000,ko00001,ko01000 - - - ACT_4,HD_4,RelA_SpoT,TGS QTD1_k127_3758148_13 1283300.ATXB01000002_gene3029 6.013e-48 196.0 COG0217@1|root,COG0217@2|Bacteria,1MW3X@1224|Proteobacteria,1RP5N@1236|Gammaproteobacteria,1XDV4@135618|Methylococcales 135618|Methylococcales K transcriptional regulatory protein - - - - - - - - - - - - Transcrip_reg QTD1_k127_3758148_14 1255043.TVNIR_3376 1.262e-43 167.0 COG0817@1|root,COG0817@2|Bacteria,1MUJI@1224|Proteobacteria,1RQPJ@1236|Gammaproteobacteria,1WW8M@135613|Chromatiales 135613|Chromatiales L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group ruvC - 3.1.22.4 ko:K01159 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - RuvC QTD1_k127_3758148_12 765913.ThidrDRAFT_1619 1.015e-60 224.0 COG0632@1|root,COG0632@2|Bacteria,1MWJR@1224|Proteobacteria,1RMET@1236|Gammaproteobacteria,1WX5V@135613|Chromatiales 135613|Chromatiales L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB ruvA - 3.6.4.12 ko:K03550 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - HHH_5,RuvA_C,RuvA_N QTD1_k127_3758148_4 1249627.D779_3007 7.168e-158 504.0 COG2255@1|root,COG2255@2|Bacteria,1MU38@1224|Proteobacteria,1RNWY@1236|Gammaproteobacteria,1WWB3@135613|Chromatiales 135613|Chromatiales L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing ruvB - 3.6.4.12 ko:K03551 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - RuvB_C,RuvB_N QTD1_k127_3758148_17 713586.KB900536_gene1050 5.764e-39 156.0 COG0824@1|root,COG0824@2|Bacteria,1MZH6@1224|Proteobacteria,1S93F@1236|Gammaproteobacteria,1WYUJ@135613|Chromatiales 135613|Chromatiales S Tol-Pal system-associated acyl-CoA thioesterase - - - ko:K07107 - - - - ko00000,ko01000 - - - 4HBT,4HBT_2 QTD1_k127_3758148_11 1049564.TevJSym_be00130 1.382e-72 252.0 COG0811@1|root,COG0811@2|Bacteria,1NCWW@1224|Proteobacteria,1RMD4@1236|Gammaproteobacteria,1J5QC@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria U COG0811 Biopolymer transport proteins tolQ GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0015893,GO:0016020,GO:0016021,GO:0017038,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0032153,GO:0033036,GO:0042221,GO:0042493,GO:0042886,GO:0042891,GO:0043213,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0050896,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - ko:K03562 ko01120,map01120 - - - ko00000,ko02000 1.A.30.2.2 - - MotA_ExbB QTD1_k127_3758148_18 247639.MGP2080_00280 5.951e-36 145.0 COG0848@1|root,COG0848@2|Bacteria,1MZ6M@1224|Proteobacteria,1S8RS@1236|Gammaproteobacteria,1J6H1@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria U Biopolymer transport protein tolR GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0015833,GO:0015893,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032153,GO:0042221,GO:0042493,GO:0042886,GO:0042891,GO:0043213,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - ko:K03560 - - - - ko00000,ko02000 1.A.30.2.2 - - ExbD QTD1_k127_3758148_20 396588.Tgr7_2230 2.816e-13 79.0 COG3064@1|root,COG3064@2|Bacteria,1R7WR@1224|Proteobacteria,1SZ86@1236|Gammaproteobacteria,1WWRY@135613|Chromatiales 135613|Chromatiales M TonB C terminal - - - ko:K03646 - - - - ko00000,ko02000 2.C.1.2 - - TonB_2 QTD1_k127_3758148_8 1283300.ATXB01000002_gene3020 1.833e-123 415.0 COG0823@1|root,COG0823@2|Bacteria,1MV09@1224|Proteobacteria,1RMCY@1236|Gammaproteobacteria,1XEH5@135618|Methylococcales 135618|Methylococcales U Involved in the TonB-independent uptake of proteins tolB - - ko:K03641 - - - - ko00000,ko02000 2.C.1.2 - - PD40,TolB_N QTD1_k127_3758148_15 1123257.AUFV01000002_gene2636 1.004e-40 158.0 COG2885@1|root,COG2885@2|Bacteria,1MZTV@1224|Proteobacteria,1S8RG@1236|Gammaproteobacteria,1X5FX@135614|Xanthomonadales 135614|Xanthomonadales M Belongs to the ompA family pal - - ko:K03640 - - - - ko00000,ko02000 2.C.1.2 - - OmpA QTD1_k127_3758148_16 1234364.AMSF01000024_gene3813 1.947e-40 167.0 COG1729@1|root,COG1729@2|Bacteria,1MUSV@1224|Proteobacteria,1RQWA@1236|Gammaproteobacteria,1X5DD@135614|Xanthomonadales 135614|Xanthomonadales D Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division cpoB - - - - - - - - - - - TPR_16,TPR_6,TolA_bind_tri QTD1_k127_3758148_10 1123261.AXDW01000006_gene2413 1.904e-92 309.0 COG0602@1|root,COG0602@2|Bacteria,1MUJ2@1224|Proteobacteria,1RNQZ@1236|Gammaproteobacteria,1X4FR@135614|Xanthomonadales 135614|Xanthomonadales H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds queE - 4.3.99.3 ko:K10026 ko00790,ko01100,map00790,map01100 - R10002 RC02989 ko00000,ko00001,ko01000,ko03016 - - - Fer4_14,Radical_SAM QTD1_k127_3758148_9 1123393.KB891316_gene1511 9.868e-100 329.0 COG0603@1|root,COG0603@2|Bacteria,1MU5V@1224|Proteobacteria,2VHY3@28216|Betaproteobacteria,1KS0G@119069|Hydrogenophilales 119069|Hydrogenophilales F Queuosine biosynthesis protein QueC - - 6.3.4.20 ko:K06920 ko00790,ko01100,map00790,map01100 - R09978 RC00959 ko00000,ko00001,ko01000,ko03016 - - - QueC QTD1_k127_3758148_1 1248916.ANFY01000004_gene1760 2.579e-256 818.0 COG1629@1|root,COG4771@2|Bacteria,1MUNK@1224|Proteobacteria,2TRCG@28211|Alphaproteobacteria,2K0ND@204457|Sphingomonadales 204457|Sphingomonadales P receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - Plug,TonB_dep_Rec QTD1_k127_3758148_7 296591.Bpro_3828 1.24e-128 422.0 COG2515@1|root,COG2515@2|Bacteria,1MVYF@1224|Proteobacteria,2VHWN@28216|Betaproteobacteria,4AAPS@80864|Comamonadaceae 28216|Betaproteobacteria E Catalyzes a cyclopropane ring-opening reaction, the irreversible conversion of 1-aminocyclopropane-1-carboxylate (ACC) to ammonia and alpha-ketobutyrate. Allows growth on ACC as a nitrogen source acdS - 3.5.99.7,4.4.1.15 ko:K01505,ko:K05396 ko00270,map00270 - R00997,R01874 RC00382,RC00419 ko00000,ko00001,ko01000 - - - PALP QTD1_k127_3758148_19 1151119.KB895489_gene484 1.008e-14 75.0 COG1126@1|root,COG1126@2|Bacteria,2GIZW@201174|Actinobacteria,1W7PY@1268|Micrococcaceae 201174|Actinobacteria E ABC transporter tcyC - 3.6.3.21 ko:K02028,ko:K02029 - M00236 - - ko00000,ko00002,ko01000,ko02000 3.A.1.3 - - ABC_tran QTD1_k127_3771756_4 472759.Nhal_3728 1.066e-37 143.0 COG1923@1|root,COG1923@2|Bacteria,1MZM1@1224|Proteobacteria,1S8W0@1236|Gammaproteobacteria,1WYTY@135613|Chromatiales 135613|Chromatiales J RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs hfq - - ko:K03666 ko02024,ko03018,ko05111,map02024,map03018,map05111 - - - ko00000,ko00001,ko03019,ko03036 - - - Hfq QTD1_k127_3771756_1 1123261.AXDW01000001_gene1392 1.073e-98 331.0 COG0324@1|root,COG0324@2|Bacteria,1MUB2@1224|Proteobacteria,1RMDU@1236|Gammaproteobacteria,1X3TF@135614|Xanthomonadales 135614|Xanthomonadales J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) miaA GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 - R01122 RC02820 ko00000,ko00001,ko01000,ko01006,ko03016 - - - IPPT QTD1_k127_3771756_0 1123253.AUBD01000008_gene401 1.97e-174 565.0 COG0323@1|root,COG0323@2|Bacteria,1MV61@1224|Proteobacteria,1RM89@1236|Gammaproteobacteria,1X4XY@135614|Xanthomonadales 135614|Xanthomonadales L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex mutL GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - ko:K03572 ko03430,map03430 - - - ko00000,ko00001,ko03400 - - - DNA_mis_repair,HATPase_c_3,MutL_C QTD1_k127_3771756_2 1384054.N790_12810 8.46e-87 302.0 COG0860@1|root,COG0860@2|Bacteria,1MUQK@1224|Proteobacteria,1RMP1@1236|Gammaproteobacteria,1X3FV@135614|Xanthomonadales 135614|Xanthomonadales M N-acetylmuramoyl-L-alanine amidase - - 3.5.1.28 ko:K01448 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 - - - AMIN,Amidase_3,LysM QTD1_k127_3771756_6 1123253.AUBD01000008_gene403 1.112e-10 64.0 COG0802@1|root,COG0802@2|Bacteria,1RGYU@1224|Proteobacteria,1S6IB@1236|Gammaproteobacteria,1X6IY@135614|Xanthomonadales 135614|Xanthomonadales S ATPase or kinase - - - ko:K06925 - - - - ko00000,ko03016 - - - TsaE QTD1_k127_3771756_5 349124.Hhal_0670 2.976e-16 81.0 COG0802@1|root,COG0802@2|Bacteria,1RGYU@1224|Proteobacteria,1S6IB@1236|Gammaproteobacteria,1WYI3@135613|Chromatiales 135613|Chromatiales S Threonylcarbamoyl adenosine biosynthesis protein TsaE - - - ko:K06925 - - - - ko00000,ko03016 - - - TsaE QTD1_k127_3771756_3 765910.MARPU_07205 9.484e-58 206.0 COG0062@1|root,COG0063@1|root,COG0062@2|Bacteria,COG0063@2|Bacteria,1MU1Q@1224|Proteobacteria,1RMPS@1236|Gammaproteobacteria,1WW1V@135613|Chromatiales 135613|Chromatiales G Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration nnrD - 4.2.1.136,5.1.99.6 ko:K17758,ko:K17759 - - - - ko00000,ko01000 - - - Carb_kinase,YjeF_N QTD1_k127_3807468_3 1380394.JADL01000010_gene4318 3.65e-119 389.0 COG5012@1|root,COG5012@2|Bacteria,1RDEU@1224|Proteobacteria,2TVXN@28211|Alphaproteobacteria,2JRJH@204441|Rhodospirillales 204441|Rhodospirillales S B12 binding domain - - - - - - - - - - - - B12-binding,B12-binding_2 QTD1_k127_3807468_4 748247.AZKH_p0168 2.162e-75 258.0 28I8Y@1|root,2Z8BR@2|Bacteria,1MXN1@1224|Proteobacteria 1224|Proteobacteria S Protein of unknown function (DUF1638) - - - - - - - - - - - - DUF1638 QTD1_k127_3807468_6 1411685.U062_00338 3.617e-18 96.0 2CDZD@1|root,32RYT@2|Bacteria,1N0AT@1224|Proteobacteria,1SSFV@1236|Gammaproteobacteria,1JB47@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria S Virulence factor - - - - - - - - - - - - Virulence_fact QTD1_k127_3807468_5 1380391.JIAS01000001_gene2818 5.874e-67 232.0 COG0685@1|root,COG0685@2|Bacteria,1RHDY@1224|Proteobacteria,2U4I0@28211|Alphaproteobacteria,2JWQ3@204441|Rhodospirillales 204441|Rhodospirillales E Methylene-tetrahydrofolate reductase C terminal - - - - - - - - - - - - MTHFR_C QTD1_k127_3807468_1 748247.AZKH_p0165 8.332e-186 593.0 COG0685@1|root,COG0685@2|Bacteria,1MXTZ@1224|Proteobacteria 1224|Proteobacteria E Methylenetetrahydrofolate reductase metF - 1.5.1.20,2.1.1.10 ko:K00297,ko:K00547 ko00270,ko00670,ko00720,ko01100,ko01110,ko01120,ko01200,ko01523,map00270,map00670,map00720,map01100,map01110,map01120,map01200,map01523 M00377 R00650,R01224,R07168 RC00003,RC00035,RC00081 ko00000,ko00001,ko00002,ko01000 - - - MTHFR QTD1_k127_3807468_2 748247.AZKH_p0164 4.23e-146 472.0 COG1410@1|root,COG1410@2|Bacteria,1MV6G@1224|Proteobacteria,2VHYQ@28216|Betaproteobacteria 1224|Proteobacteria H Vitamin B12 dependent methionine synthase activation metH - 2.1.1.13,2.1.1.258 ko:K00548,ko:K15023 ko00270,ko00450,ko00670,ko00720,ko01100,ko01110,ko01120,ko01200,ko01230,map00270,map00450,map00670,map00720,map01100,map01110,map01120,map01200,map01230 M00017,M00377 R00946,R02289,R09365,R10243 RC00004,RC00035,RC00113,RC01144,RC01241,RC02871,RC02977 ko00000,ko00001,ko00002,ko01000 - - - B12-binding,B12-binding_2,Met_synt_B12,Pterin_bind,S-methyl_trans QTD1_k127_3807468_0 1380394.JADL01000010_gene4323 1.963e-293 933.0 COG0633@1|root,COG3894@1|root,COG0633@2|Bacteria,COG3894@2|Bacteria,1MV6C@1224|Proteobacteria,2TUJB@28211|Alphaproteobacteria,2JQGJ@204441|Rhodospirillales 204441|Rhodospirillales C Domain of unknown function (DUF4445) - - - - - - - - - - - - DUF4445,Fer2 QTD1_k127_3807468_7 1248916.ANFY01000007_gene2240 8.754e-13 74.0 COG0251@1|root,COG0251@2|Bacteria,1RCX5@1224|Proteobacteria,2U74Y@28211|Alphaproteobacteria,2K6P3@204457|Sphingomonadales 204457|Sphingomonadales J Endoribonuclease L-PSP - - - - - - - - - - - - Ribonuc_L-PSP QTD1_k127_3816595_7 1304883.KI912532_gene303 1.248e-05 50.0 COG2980@1|root,COG2980@2|Bacteria,1N13K@1224|Proteobacteria,2VU54@28216|Betaproteobacteria,2KWYS@206389|Rhodocyclales 206389|Rhodocyclales M Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane lptE - - ko:K03643 - - - - ko00000,ko02000 1.B.42.1 - - LptE QTD1_k127_3816595_4 396588.Tgr7_2693 1.714e-58 211.0 2AEMZ@1|root,314HW@2|Bacteria,1RHE3@1224|Proteobacteria,1S7P7@1236|Gammaproteobacteria,1WYF1@135613|Chromatiales 135613|Chromatiales - - - - - - - - - - - - - - - QTD1_k127_3816595_1 1136138.JH604622_gene326 7.461e-70 248.0 COG1466@1|root,COG1466@2|Bacteria,1MWYT@1224|Proteobacteria,1RQRE@1236|Gammaproteobacteria 1236|Gammaproteobacteria L dna polymerase III delta subunit holA GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_delt_C,DNA_pol3_delta QTD1_k127_3816595_2 395493.BegalDRAFT_1129 1.293e-62 223.0 COG1057@1|root,COG1057@2|Bacteria,1RD0J@1224|Proteobacteria,1RP00@1236|Gammaproteobacteria,460SF@72273|Thiotrichales 72273|Thiotrichales H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) nadD - 2.7.7.18 ko:K00969 ko00760,ko01100,map00760,map01100 M00115 R00137,R03005 RC00002 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_like QTD1_k127_3816595_6 767434.Fraau_1568 2.508e-36 144.0 COG0799@1|root,COG0799@2|Bacteria,1MZEF@1224|Proteobacteria,1S8W3@1236|Gammaproteobacteria,1X6H0@135614|Xanthomonadales 135614|Xanthomonadales J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation rsfS - - ko:K09710 - - - - ko00000,ko03009 - - - RsfS QTD1_k127_3816595_5 666685.R2APBS1_1147 6.439e-46 170.0 COG1576@1|root,COG1576@2|Bacteria,1R9Z2@1224|Proteobacteria,1S1ZY@1236|Gammaproteobacteria,1X5XV@135614|Xanthomonadales 135614|Xanthomonadales J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA rlmH - 2.1.1.177 ko:K00783 - - - - ko00000,ko01000,ko03009 - - - SPOUT_MTase QTD1_k127_3816595_3 765910.MARPU_03160 1.561e-59 211.0 COG0424@1|root,COG0424@2|Bacteria,1RH6H@1224|Proteobacteria,1S41D@1236|Gammaproteobacteria,1WY2J@135613|Chromatiales 135613|Chromatiales D Maf-like protein - - - ko:K06287 - - - - ko00000 - - - Maf QTD1_k127_3816595_0 1131451.O1K_02751 6.245e-123 413.0 COG1530@1|root,COG1530@2|Bacteria,1MV65@1224|Proteobacteria,1RMIW@1236|Gammaproteobacteria,1X2ZH@135614|Xanthomonadales 135614|Xanthomonadales J Involved in the processing of the 5'end of 16S rRNA rng - - ko:K08301 - - - - ko00000,ko01000,ko03009,ko03019 - - - RNase_E_G,S1 QTD1_k127_3820679_2 1385935.N836_11475 1.472e-44 177.0 COG5001@1|root,COG5001@2|Bacteria,1G0BS@1117|Cyanobacteria,1H9V4@1150|Oscillatoriales 1117|Cyanobacteria T Diguanylate cyclase - - - - - - - - - - - - CBS,EAL,GGDEF,PAS,PAS_3,PAS_4,PAS_9,Response_reg QTD1_k127_3820679_0 1385517.N800_12475 1.094e-64 244.0 COG0859@1|root,COG0859@2|Bacteria,1PCMB@1224|Proteobacteria,1SXQA@1236|Gammaproteobacteria,1X6JI@135614|Xanthomonadales 135614|Xanthomonadales M Glycosyltransferase family 9 (heptosyltransferase) - - - - - - - - - - - - Glyco_transf_9 QTD1_k127_3820679_3 391615.ABSJ01000004_gene643 1.051e-43 174.0 COG2121@1|root,COG2121@2|Bacteria,1MZID@1224|Proteobacteria,1T7TI@1236|Gammaproteobacteria,1JB79@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria S Domain of unknown function (DUF374) - - - - - - - - - - - - DUF374 QTD1_k127_3820679_4 1304275.C41B8_14940 0.0001181 52.0 COG2091@1|root,COG2091@2|Bacteria,1NH1U@1224|Proteobacteria 1224|Proteobacteria H Belongs to the P-Pant transferase superfamily sfp GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008897,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016780,GO:0019752,GO:0019878,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - ko:K06133 ko00770,map00770 - R01625 RC00002 ko00000,ko00001,ko01000 - - - ACPS QTD1_k127_3820679_1 232721.Ajs_3072 1.643e-55 202.0 COG2124@1|root,COG2124@2|Bacteria,1MV75@1224|Proteobacteria,2WGHK@28216|Betaproteobacteria,4AF4Y@80864|Comamonadaceae 28216|Betaproteobacteria C PFAM Cytochrome P450 - - 1.14.14.1,1.6.2.4 ko:K14338 ko00071,ko00380,ko00627,ko01120,map00071,map00380,map00627,map01120 - R03629,R04121,R05259 RC00046,RC01311 ko00000,ko00001,ko00199,ko01000 - - - FAD_binding_1,Flavodoxin_1,NAD_binding_1,p450 QTD1_k127_3829296_4 1173264.KI913949_gene2290 1.961e-53 205.0 COG1680@1|root,COG1680@2|Bacteria,1G1T2@1117|Cyanobacteria,1HD18@1150|Oscillatoriales 1117|Cyanobacteria V Beta-lactamase - - - - - - - - - - - - Beta-lactamase QTD1_k127_3829296_1 1380394.JADL01000001_gene3101 2.314e-82 287.0 COG0477@1|root,COG2814@2|Bacteria,1MVSH@1224|Proteobacteria,2TUEW@28211|Alphaproteobacteria,2JV5D@204441|Rhodospirillales 204441|Rhodospirillales EGP Sugar (and other) transporter - - - ko:K08151 - M00668 - - ko00000,ko00002,ko01504,ko02000 2.A.1.2.38,2.A.1.2.39,2.A.1.2.4,2.A.1.2.41,2.A.1.2.68,2.A.1.2.75 - - MFS_1 QTD1_k127_3829296_6 247634.GPB2148_3294 2.979e-26 111.0 COG2146@1|root,COG2146@2|Bacteria,1N8PE@1224|Proteobacteria,1RXCG@1236|Gammaproteobacteria,1JBB2@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria P Rieske-like [2Fe-2S] domain - - - - - - - - - - - - Rieske QTD1_k127_3829296_3 1304874.JAFY01000002_gene937 3.015e-61 222.0 COG0384@1|root,COG0384@2|Bacteria,3TBM4@508458|Synergistetes 508458|Synergistetes S Phenazine biosynthesis-like protein - - 5.3.3.17 ko:K06998 ko00405,ko01130,ko02024,map00405,map01130,map02024 M00835 - - ko00000,ko00001,ko00002,ko01000 - - - PhzC-PhzF QTD1_k127_3829296_7 1121937.AUHJ01000014_gene2677 1.725e-12 71.0 2E5J4@1|root,330AE@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - Ykof QTD1_k127_3829296_5 1449076.JOOE01000004_gene389 3.079e-30 122.0 COG0633@1|root,COG0633@2|Bacteria,1N261@1224|Proteobacteria,2UC7B@28211|Alphaproteobacteria,2K5DE@204457|Sphingomonadales 204457|Sphingomonadales C ferredoxin - - - ko:K04755 - - - - ko00000 - - - Fer2 QTD1_k127_3829296_2 649747.HMPREF0083_05611 6.225e-66 233.0 COG1024@1|root,COG1024@2|Bacteria,1TQ2V@1239|Firmicutes,4HTKK@91061|Bacilli,276IV@186822|Paenibacillaceae 91061|Bacilli I Enoyl-CoA hydratase/isomerase - - - - - - - - - - - - ECH_1 QTD1_k127_3829296_0 575540.Isop_1724 1.081e-86 290.0 COG0588@1|root,COG0588@2|Bacteria 2|Bacteria G phosphoglycerate mutase activity gpmA GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 - - - His_Phos_1 QTD1_k127_3845296_0 1382359.JIAL01000001_gene537 2.705e-158 513.0 COG3533@1|root,COG3533@2|Bacteria,3Y3WA@57723|Acidobacteria,2JKD6@204432|Acidobacteriia 204432|Acidobacteriia S Beta-L-arabinofuranosidase, GH127 - - - ko:K09955 - - - - ko00000 - - - Glyco_hydro_127 QTD1_k127_3845296_1 1040982.AXAL01000022_gene6445 4.344e-134 437.0 COG4638@1|root,COG4638@2|Bacteria,1MWXW@1224|Proteobacteria,2TSJ5@28211|Alphaproteobacteria,43GYK@69277|Phyllobacteriaceae 28211|Alphaproteobacteria P Rieske 2Fe-2S - - - ko:K00479 - - - - ko00000 - - - Rieske,Ring_hydroxyl_A QTD1_k127_3845296_2 1149133.ppKF707_3655 1.036e-109 368.0 COG0687@1|root,COG0687@2|Bacteria,1MUYW@1224|Proteobacteria,1RM7W@1236|Gammaproteobacteria,1YDF5@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria E Bacterial extracellular solute-binding protein potF - - ko:K11073 ko02010,map02010 M00300 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11.2 - - SBP_bac_8 QTD1_k127_3868424_18 1122604.JONR01000008_gene2249 2e-22 100.0 2E69Z@1|root,330XW@2|Bacteria,1NC2S@1224|Proteobacteria,1SDZ1@1236|Gammaproteobacteria,1X7Z3@135614|Xanthomonadales 135614|Xanthomonadales P Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria - - - - - - - - - - - - HIPIP,TAT_signal QTD1_k127_3868424_16 1267533.KB906733_gene3378 1.932e-41 160.0 COG5516@1|root,COG5516@2|Bacteria,3Y5TP@57723|Acidobacteria,2JNQF@204432|Acidobacteriia 204432|Acidobacteriia S Putative stress-induced transcription regulator - - - - - - - - - - - - ABATE,zf-CGNR QTD1_k127_3868424_12 639030.JHVA01000001_gene2790 2.124e-84 289.0 COG0697@1|root,COG0697@2|Bacteria,3Y4XS@57723|Acidobacteria,2JJHU@204432|Acidobacteriia 204432|Acidobacteriia EG EamA-like transporter family - - - - - - - - - - - - EamA QTD1_k127_3868424_17 105559.Nwat_0842 1.372e-36 146.0 2C852@1|root,32YB2@2|Bacteria,1RH28@1224|Proteobacteria 1224|Proteobacteria S Domain of unknown function (DUF4136) VPA1096 - - - - - - - - - - - DUF4136 QTD1_k127_3868424_19 1163409.UUA_14724 2.147e-17 85.0 COG3905@1|root,COG3905@2|Bacteria,1N7D2@1224|Proteobacteria,1SCP8@1236|Gammaproteobacteria,1X919@135614|Xanthomonadales 135614|Xanthomonadales K copG family - - - - - - - - - - - - - QTD1_k127_3868424_0 666685.R2APBS1_2169 1.729e-264 830.0 COG0651@1|root,COG0651@2|Bacteria,1MXRW@1224|Proteobacteria,1RM9Q@1236|Gammaproteobacteria,1XA2F@135614|Xanthomonadales 135614|Xanthomonadales CP Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit - - - - - - - - - - - - Proton_antipo_M QTD1_k127_3868424_7 1122604.JONR01000030_gene1324 8.091e-135 439.0 COG0650@1|root,COG0650@2|Bacteria,1MXV5@1224|Proteobacteria,1RPCY@1236|Gammaproteobacteria,1X98P@135614|Xanthomonadales 135614|Xanthomonadales C NADH dehydrogenase - - - - - - - - - - - - NADHdh QTD1_k127_3868424_13 1122604.JONR01000030_gene1325 3.007e-78 273.0 COG4237@1|root,COG4237@2|Bacteria,1NAT8@1224|Proteobacteria,1RRYF@1236|Gammaproteobacteria,1X9HR@135614|Xanthomonadales 135614|Xanthomonadales C hydrogenase 4 membrane - - - ko:K12140 - - - - ko00000,ko01000 - - - - QTD1_k127_3868424_1 1163409.UUA_14704 3.837e-241 755.0 COG0651@1|root,COG0651@2|Bacteria,1MVBA@1224|Proteobacteria,1RPB3@1236|Gammaproteobacteria,1XA5T@135614|Xanthomonadales 135614|Xanthomonadales CP Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit - - - ko:K12141 - - - - ko00000,ko01000 - - - Proton_antipo_M QTD1_k127_3868424_6 1366050.N234_08430 4.384e-178 571.0 COG3261@1|root,COG3262@1|root,COG3261@2|Bacteria,COG3262@2|Bacteria,1QUBF@1224|Proteobacteria,2VJ0R@28216|Betaproteobacteria,1K61J@119060|Burkholderiaceae 28216|Betaproteobacteria C Respiratory-chain NADH dehydrogenase, 49 Kd subunit hyfG - - - - - - - - - - - Complex1_30kDa,Complex1_49kDa,NiFeSe_Hases QTD1_k127_3868424_14 1454004.AW11_01549 1.859e-71 244.0 COG3260@1|root,COG3260@2|Bacteria,1QUBE@1224|Proteobacteria,2VP8A@28216|Betaproteobacteria 28216|Betaproteobacteria C NADH ubiquinone oxidoreductase 20 kDa subunit hyfI - - - - - - - - - - - Oxidored_q6 QTD1_k127_3868424_11 886293.Sinac_7126 5.704e-101 357.0 COG1524@1|root,COG1524@2|Bacteria,2IYCV@203682|Planctomycetes 203682|Planctomycetes S Type I phosphodiesterase / nucleotide pyrophosphatase - - - - - - - - - - - - Phosphodiest QTD1_k127_3868424_8 1300345.LF41_2246 2.538e-131 433.0 COG0531@1|root,COG0531@2|Bacteria,1MUA2@1224|Proteobacteria,1RRKS@1236|Gammaproteobacteria,1X4PJ@135614|Xanthomonadales 135614|Xanthomonadales E Amino acid permease - - - - - - - - - - - - AA_permease_2 QTD1_k127_3868424_4 666685.R2APBS1_0795 8.177e-208 653.0 COG0160@1|root,COG0160@2|Bacteria,1MWY6@1224|Proteobacteria,1RMP0@1236|Gammaproteobacteria,1X4KU@135614|Xanthomonadales 135614|Xanthomonadales E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - 2.6.1.19 ko:K00823 ko00250,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00410,map00640,map00650,map01100,map01120 M00027 R00908,R01648 RC00006,RC00062 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_3 QTD1_k127_3868424_10 1384054.N790_05520 3.443e-109 360.0 COG2057@1|root,COG2057@2|Bacteria,1MY3S@1224|Proteobacteria,1RP1U@1236|Gammaproteobacteria,1X4IB@135614|Xanthomonadales 135614|Xanthomonadales I Acyl CoA acetate 3-ketoacid CoA transferase beta subunit gctB - 2.8.3.12 ko:K01040 ko00643,ko00650,ko01120,map00643,map00650,map01120 - R04000,R05509 RC00012,RC00131,RC00137 ko00000,ko00001,ko01000 - - - CoA_trans QTD1_k127_3868424_9 1163409.UUA_08331 4.124e-117 382.0 COG1788@1|root,COG1788@2|Bacteria,1NGS5@1224|Proteobacteria,1RRZQ@1236|Gammaproteobacteria,1X4I7@135614|Xanthomonadales 135614|Xanthomonadales I Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit gctA - 2.8.3.12 ko:K01039 ko00643,ko00650,ko01120,map00643,map00650,map01120 - R04000,R05509 RC00012,RC00131,RC00137 ko00000,ko00001,ko01000 - - - CoA_trans QTD1_k127_3868424_2 1163409.UUA_08326 4.553e-237 743.0 COG1012@1|root,COG1012@2|Bacteria,1QWN5@1224|Proteobacteria,1T508@1236|Gammaproteobacteria,1X5AD@135614|Xanthomonadales 135614|Xanthomonadales C Aldehyde dehydrogenase family - - 1.2.1.88 ko:K00294 ko00250,ko00330,ko01100,map00250,map00330,map01100 - R00245,R00707,R00708,R04444,R04445,R05051 RC00080,RC00216,RC00242,RC00255 ko00000,ko00001,ko01000 - - - Aldedh QTD1_k127_3868424_5 666685.R2APBS1_0799 3.724e-198 626.0 COG0161@1|root,COG0161@2|Bacteria,1MU2N@1224|Proteobacteria,1RNW9@1236|Gammaproteobacteria,1X38V@135614|Xanthomonadales 135614|Xanthomonadales E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - 2.6.1.55 ko:K15372 ko00410,ko00430,ko01100,map00410,map00430,map01100 - R00908,R01684 RC00006,RC00062 ko00000,ko00001,ko01000 - - - Aminotran_3 QTD1_k127_3868424_3 1163409.UUA_08346 1.561e-232 750.0 COG0823@1|root,COG0823@2|Bacteria,1MWYK@1224|Proteobacteria,1RXYW@1236|Gammaproteobacteria,1XD03@135614|Xanthomonadales 135614|Xanthomonadales U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 QTD1_k127_3868424_15 1121946.AUAX01000019_gene7760 7.812e-45 164.0 COG0404@1|root,COG0665@1|root,COG0404@2|Bacteria,COG0665@2|Bacteria,2GNCW@201174|Actinobacteria,4DHIQ@85008|Micromonosporales 201174|Actinobacteria E FAD dependent oxidoreductase central domain - - 1.5.3.19 ko:K19191 ko00760,ko01120,map00760,map01120 - R10102 RC00060,RC00557 ko00000,ko00001,ko01000 - - - DAO,FAO_M,GCV_T,GCV_T_C QTD1_k127_3871892_2 675813.VIB_000808 1.335e-25 107.0 COG0045@1|root,COG0045@2|Bacteria,1MVCE@1224|Proteobacteria,1RMSU@1236|Gammaproteobacteria,1XTU2@135623|Vibrionales 135623|Vibrionales F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit sucC GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5 ko:K01903 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00173,M00374,M00620 R00405,R02404 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000 - - - ATP-grasp_2,Ligase_CoA QTD1_k127_3871892_1 519989.ECTPHS_01994 8.125e-137 447.0 COG0074@1|root,COG0074@2|Bacteria,1MUGA@1224|Proteobacteria,1RM7Y@1236|Gammaproteobacteria,1WW8G@135613|Chromatiales 135613|Chromatiales C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit sucD - 6.2.1.5 ko:K01902 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00173,M00374,M00620 R00405,R02404 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000 - - - CoA_binding,Ligase_CoA QTD1_k127_3871892_0 396588.Tgr7_0811 3.364e-187 618.0 COG0171@1|root,COG0388@1|root,COG0171@2|Bacteria,COG0388@2|Bacteria,1MU9U@1224|Proteobacteria,1RNKA@1236|Gammaproteobacteria,1WWS1@135613|Chromatiales 135613|Chromatiales H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source nadE - 6.3.5.1 ko:K01950 ko00760,ko01100,map00760,map01100 M00115 R00257 RC00010,RC00100 ko00000,ko00001,ko00002,ko01000 - - - CN_hydrolase,NAD_synthase QTD1_k127_3911414_11 1379270.AUXF01000001_gene2209 9.188e-28 115.0 COG0332@1|root,COG0332@2|Bacteria,1ZU9P@142182|Gemmatimonadetes 142182|Gemmatimonadetes I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids - - 2.3.1.180 ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00082,M00083 R10707 RC00004,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - ACP_syn_III,ACP_syn_III_C QTD1_k127_3911414_12 941449.dsx2_0195 1.641e-27 120.0 COG0724@1|root,COG0724@2|Bacteria,1N6VR@1224|Proteobacteria,42V9Q@68525|delta/epsilon subdivisions,2WRRT@28221|Deltaproteobacteria,2MCID@213115|Desulfovibrionales 28221|Deltaproteobacteria S PFAM RNP-1 like RNA-binding protein - - - - - - - - - - - - RRM_1 QTD1_k127_3911414_6 1198452.Jab_2c00930 1.631e-63 229.0 COG0583@1|root,COG0583@2|Bacteria,1MV06@1224|Proteobacteria,2VHGD@28216|Betaproteobacteria,473DX@75682|Oxalobacteraceae 28216|Betaproteobacteria K LysR substrate binding domain - - - ko:K18900 - M00698 - - ko00000,ko00002,ko01504,ko03000 - - - HTH_1,LysR_substrate QTD1_k127_3911414_3 1121015.N789_01640 2.083e-160 539.0 COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,1RM8A@1236|Gammaproteobacteria,1X2Z4@135614|Xanthomonadales 135614|Xanthomonadales T phosphodiesterase - - - - - - - - - - - - EAL,GGDEF,HAMP,dCache_3 QTD1_k127_3911414_8 1121015.N789_01645 1.906e-44 170.0 COG3794@1|root,COG3794@2|Bacteria,1RHQU@1224|Proteobacteria,1S6US@1236|Gammaproteobacteria,1X6Q5@135614|Xanthomonadales 135614|Xanthomonadales C PFAM blue (type 1) copper domain protein - - - - - - - - - - - - - QTD1_k127_3911414_7 857087.Metme_0810 9.863e-46 184.0 2C8CD@1|root,2Z9AD@2|Bacteria,1N17D@1224|Proteobacteria,1RRIP@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_3911414_4 1379270.AUXF01000003_gene3543 4.592e-150 491.0 COG1013@1|root,COG1013@2|Bacteria,1ZSWT@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - 1.2.7.11,1.2.7.3 ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C QTD1_k127_3911414_1 394221.Mmar10_0351 4.368e-254 797.0 COG0674@1|root,COG1014@1|root,COG0674@2|Bacteria,COG1014@2|Bacteria,1NBSJ@1224|Proteobacteria,2TU21@28211|Alphaproteobacteria,43Z43@69657|Hyphomonadaceae 28211|Alphaproteobacteria C pyruvate flavodoxin ferredoxin oxidoreductase MA20_01045 - 1.2.7.11,1.2.7.3 ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - PFOR_II,POR,POR_N QTD1_k127_3911414_0 1280949.HAD_14109 8.819e-294 912.0 COG0493@1|root,COG1143@1|root,COG0493@2|Bacteria,COG1143@2|Bacteria,1MU2H@1224|Proteobacteria,2TQK5@28211|Alphaproteobacteria 28211|Alphaproteobacteria C COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases MA20_01050 - 1.17.1.10 ko:K15022 ko00680,ko00720,ko01120,ko01200,map00680,map00720,map01120,map01200 M00377 R00134 RC02796 ko00000,ko00001,ko00002,ko01000 - - - Fer4_20,Fer4_7,NADH_4Fe-4S,Pyr_redox_2,Pyr_redox_3 QTD1_k127_3911414_9 1123060.JONP01000017_gene5346 8.357e-42 158.0 COG3536@1|root,COG3536@2|Bacteria,1MZ5M@1224|Proteobacteria,2U9GJ@28211|Alphaproteobacteria,2JT01@204441|Rhodospirillales 204441|Rhodospirillales S Protein of unknown function (DUF971) - - - - - - - - - - - - DUF971 QTD1_k127_3911414_5 713586.KB900536_gene2189 3.424e-102 339.0 COG0500@1|root,COG2226@2|Bacteria,1MX8I@1224|Proteobacteria,1RMAU@1236|Gammaproteobacteria,1WWSM@135613|Chromatiales 135613|Chromatiales H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) ubiE - 2.1.1.163,2.1.1.201 ko:K03183 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116,M00117 R04990,R04993,R06859,R08774,R09736 RC00003,RC01253,RC01662 ko00000,ko00001,ko00002,ko01000 - - - Ubie_methyltran QTD1_k127_3911414_13 187272.Mlg_0070 2.569e-12 76.0 COG3165@1|root,COG3165@2|Bacteria 2|Bacteria S ubiquinone biosynthetic process from chorismate yigP GO:0006082,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0019752,GO:0032150,GO:0042180,GO:0042181,GO:0043436,GO:0043648,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046417,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 - ko:K03690 - - - - ko00000 - - - SCP2 QTD1_k127_3911414_2 396588.Tgr7_0061 2.732e-199 646.0 COG0661@1|root,COG0661@2|Bacteria,1MU1Z@1224|Proteobacteria,1RNQM@1236|Gammaproteobacteria,1WWEC@135613|Chromatiales 135613|Chromatiales S Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis ubiB - - ko:K03688 - - - - ko00000 - - - ABC1 QTD1_k127_3911414_10 1123073.KB899241_gene3119 8.791e-36 137.0 COG0534@1|root,COG0534@2|Bacteria,1MVRV@1224|Proteobacteria,1RRDQ@1236|Gammaproteobacteria,1X3ZH@135614|Xanthomonadales 135614|Xanthomonadales V Na -driven multidrug efflux pump - - - - - - - - - - - - MatE QTD1_k127_3926924_2 1134912.AJTV01000024_gene2806 4.134e-07 59.0 COG4105@1|root,COG4571@1|root,COG4105@2|Bacteria,COG4571@2|Bacteria,1QYYT@1224|Proteobacteria,2TY1X@28211|Alphaproteobacteria 28211|Alphaproteobacteria M Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - - - - - - - - - - Pom QTD1_k127_3926924_0 1218084.BBJK01000007_gene957 8.541e-129 416.0 COG5285@1|root,COG5285@2|Bacteria,1PF68@1224|Proteobacteria,2VNUI@28216|Betaproteobacteria,1K38P@119060|Burkholderiaceae 28216|Betaproteobacteria Q Phytanoyl-CoA dioxygenase (PhyH) - - - - - - - - - - - - PhyH QTD1_k127_3926924_1 28229.ND2E_0293 2.788e-16 89.0 2DNHZ@1|root,32XM8@2|Bacteria,1QUVC@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - QTD1_k127_3927266_0 1123392.AQWL01000005_gene3146 6.96e-190 606.0 COG0392@1|root,COG2898@1|root,COG0392@2|Bacteria,COG2898@2|Bacteria,1MXH9@1224|Proteobacteria,2VK9C@28216|Betaproteobacteria 28216|Betaproteobacteria S Uncharacterised conserved protein (DUF2156) - - 2.3.2.3 ko:K07027,ko:K14205 ko01503,ko02020,ko05150,map01503,map02020,map05150 M00726 - - ko00000,ko00001,ko00002,ko01000,ko01504,ko02000 2.A.1.3.37,4.D.2 - - DUF2156,LPG_synthase_TM QTD1_k127_3927266_1 1121918.ARWE01000001_gene3120 7.607e-125 417.0 COG3946@1|root,COG3946@2|Bacteria,1R7R5@1224|Proteobacteria,42SDF@68525|delta/epsilon subdivisions,2WP3V@28221|Deltaproteobacteria 28221|Deltaproteobacteria U Bacterial virulence protein (VirJ) - - - - - - - - - - - - VirJ QTD1_k127_3932484_6 1158165.KB898877_gene1297 1.333e-21 99.0 COG0354@1|root,COG0354@2|Bacteria,1N852@1224|Proteobacteria,1RPWB@1236|Gammaproteobacteria,1WWK8@135613|Chromatiales 135613|Chromatiales S Belongs to the GcvT family - - - ko:K06980 - - - - ko00000,ko03016 - - - GCV_T,GCV_T_C QTD1_k127_3932484_4 42256.RradSPS_2313 2.625e-45 168.0 COG3791@1|root,COG3791@2|Bacteria 2|Bacteria S Glutathione-dependent formaldehyde-activating - - - - - - - - - - - - GFA QTD1_k127_3932484_0 243233.MCA0301 2.306e-206 657.0 COG1190@1|root,COG1190@2|Bacteria,1MX1V@1224|Proteobacteria,1RMJN@1236|Gammaproteobacteria,1XDV5@135618|Methylococcales 135618|Methylococcales J Belongs to the class-II aminoacyl-tRNA synthetase family lysS - 6.1.1.6 ko:K04567 ko00970,map00970 M00359,M00360 R03658 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_2,tRNA_anti-codon QTD1_k127_3932484_2 1234364.AMSF01000016_gene1508 1.056e-156 505.0 COG1186@1|root,COG1186@2|Bacteria,1MUAW@1224|Proteobacteria,1RP9Z@1236|Gammaproteobacteria,1X4QY@135614|Xanthomonadales 135614|Xanthomonadales J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA prfB - - ko:K02836 - - - - ko00000,ko03012 - - - PCRF,RF-1 QTD1_k127_3932484_1 1523503.JPMY01000002_gene3863 3.677e-178 575.0 COG0608@1|root,COG0608@2|Bacteria,1MU1M@1224|Proteobacteria,1RMF4@1236|Gammaproteobacteria 1236|Gammaproteobacteria L Single-stranded-DNA-specific exonuclease recJ GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008297,GO:0008409,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0035312,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0045145,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DHH,DHHA1 QTD1_k127_3932484_7 519989.ECTPHS_03647 6.923e-10 70.0 COG4255@1|root,COG4255@2|Bacteria,1RA9X@1224|Proteobacteria,1S23W@1236|Gammaproteobacteria,1WY5V@135613|Chromatiales 135613|Chromatiales S protein conserved in bacteria - - - - - - - - - - - - - QTD1_k127_3932484_5 314278.NB231_01434 1.96e-25 110.0 COG3737@1|root,COG3737@2|Bacteria,1N083@1224|Proteobacteria,1SD91@1236|Gammaproteobacteria,1X23R@135613|Chromatiales 135613|Chromatiales S Protein of unknown function (DUF498/DUF598) - - - - - - - - - - - - DUF498 QTD1_k127_3932484_3 857087.Metme_4027 7.581e-77 263.0 COG2518@1|root,COG2518@2|Bacteria,1MXQC@1224|Proteobacteria,1RMHZ@1236|Gammaproteobacteria,1XE36@135618|Methylococcales 135618|Methylococcales O Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins pcm - 2.1.1.77 ko:K00573 - - - - ko00000,ko01000 - - - PCMT QTD1_k127_3938231_5 396588.Tgr7_2118 2.264e-55 198.0 COG0501@1|root,COG0501@2|Bacteria,1MUV4@1224|Proteobacteria,1RMN0@1236|Gammaproteobacteria,1WWI6@135613|Chromatiales 135613|Chromatiales O Belongs to the peptidase M48B family htpX - - ko:K03799 - M00743 - - ko00000,ko00002,ko01000,ko01002 - - - Peptidase_M48 QTD1_k127_3938231_3 1121015.N789_03295 3.156e-103 346.0 COG1814@1|root,COG1814@2|Bacteria,1MUZE@1224|Proteobacteria,1S2G7@1236|Gammaproteobacteria,1X61U@135614|Xanthomonadales 135614|Xanthomonadales S VIT family - - - - - - - - - - - - VIT1 QTD1_k127_3938231_8 472759.Nhal_2246 7.521e-15 79.0 2E600@1|root,3315C@2|Bacteria,1NB48@1224|Proteobacteria,1SD2Y@1236|Gammaproteobacteria,1X1WR@135613|Chromatiales 135613|Chromatiales - - - - - - - - - - - - - - - QTD1_k127_3938231_1 1244869.H261_07166 7.099e-143 470.0 COG0263@1|root,COG0263@2|Bacteria,1MUBG@1224|Proteobacteria,2TRKB@28211|Alphaproteobacteria,2JPD3@204441|Rhodospirillales 204441|Rhodospirillales E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate proB - 2.7.2.11 ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 M00015 R00239 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase,PUA QTD1_k127_3938231_0 402881.Plav_1478 5.472e-170 562.0 COG0014@1|root,COG0014@2|Bacteria,1MUGJ@1224|Proteobacteria,2TS83@28211|Alphaproteobacteria,1JN5H@119043|Rhodobiaceae 28211|Alphaproteobacteria E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate proA GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 M00015 R03313 RC00684 ko00000,ko00001,ko00002,ko01000 - - - Aldedh QTD1_k127_3938231_6 1234364.AMSF01000015_gene3109 3.23e-55 198.0 COG0314@1|root,COG0476@1|root,COG0314@2|Bacteria,COG0476@2|Bacteria,1MW7H@1224|Proteobacteria,1RPJ3@1236|Gammaproteobacteria,1X3YQ@135614|Xanthomonadales 135614|Xanthomonadales H ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase moeB - - - - - - - - - - - Rhodanese,ThiF QTD1_k127_3938231_4 1224746.B932_1928 4.821e-76 268.0 COG0746@1|root,COG1977@1|root,COG0746@2|Bacteria,COG1977@2|Bacteria,1RKCH@1224|Proteobacteria,2VFYJ@28211|Alphaproteobacteria 28211|Alphaproteobacteria H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor mobA - 2.7.7.77 ko:K03752 ko00790,ko01100,map00790,map01100 - R11581 - ko00000,ko00001,ko01000 - - - NTP_transf_3,ThiS QTD1_k127_3938231_7 1384054.N790_11120 5.048e-50 195.0 COG0315@1|root,COG0315@2|Bacteria,1RCYZ@1224|Proteobacteria,1S3ST@1236|Gammaproteobacteria,1X6FA@135614|Xanthomonadales 135614|Xanthomonadales H Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) moaC - 4.6.1.17 ko:K03637 ko00790,ko01100,ko04122,map00790,map01100,map04122 - R11372 RC03425 ko00000,ko00001,ko01000 - - - MoCF_biosynth,MoaC QTD1_k127_3938231_2 1123073.KB899244_gene303 1.351e-132 430.0 COG2896@1|root,COG2896@2|Bacteria,1MW3W@1224|Proteobacteria,1RR68@1236|Gammaproteobacteria,1X46A@135614|Xanthomonadales 135614|Xanthomonadales H Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate moaA - 4.1.99.22 ko:K03639 ko00790,ko01100,ko04122,map00790,map01100,map04122 - R09394 RC03420 ko00000,ko00001,ko01000 - - - Fer4_12,Mob_synth_C,Radical_SAM QTD1_k127_3954227_5 1283300.ATXB01000001_gene215 6.101e-66 228.0 COG0682@1|root,COG0682@2|Bacteria,1MVE3@1224|Proteobacteria,1RMVK@1236|Gammaproteobacteria,1XEIT@135618|Methylococcales 135618|Methylococcales M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins lgt - - ko:K13292 - - - - ko00000,ko01000 - - - LGT QTD1_k127_3954227_2 1577887.JSYG01000025_gene3133 2.613e-128 416.0 COG0207@1|root,COG0207@2|Bacteria,1MUBD@1224|Proteobacteria,1RPYV@1236|Gammaproteobacteria,2JDGR@204037|Dickeya 1236|Gammaproteobacteria F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis thyA GO:0000287,GO:0003674,GO:0003824,GO:0004799,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006231,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009157,GO:0009162,GO:0009165,GO:0009176,GO:0009177,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009314,GO:0009394,GO:0009628,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0032259,GO:0034641,GO:0034654,GO:0042083,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046073,GO:0046385,GO:0046483,GO:0046872,GO:0050896,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.45 ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 M00053 R02101 RC00219,RC00332 ko00000,ko00001,ko00002,ko01000 - - iAF1260.b2827,iAPECO1_1312.APECO1_3678,iBWG_1329.BWG_2562,iE2348C_1286.E2348C_3096,iEC042_1314.EC042_3024,iEC55989_1330.EC55989_3103,iECABU_c1320.ECABU_c31240,iECDH10B_1368.ECDH10B_2997,iECDH1ME8569_1439.ECDH1ME8569_2734,iECED1_1282.ECED1_3283,iECH74115_1262.ECH74115_4093,iECIAI1_1343.ECIAI1_2935,iECIAI39_1322.ECIAI39_3246,iECNA114_1301.ECNA114_2885,iECO103_1326.ECO103_3386,iECO111_1330.ECO111_3555,iECO26_1355.ECO26_3899,iECOK1_1307.ECOK1_3231,iECP_1309.ECP_2840,iECS88_1305.ECS88_3122,iECSE_1348.ECSE_3084,iECSF_1327.ECSF_2642,iECSP_1301.ECSP_3779,iECUMN_1333.ECUMN_3154,iECW_1372.ECW_m3069,iECs_1301.ECs3684,iEKO11_1354.EKO11_0914,iETEC_1333.ETEC_3014,iEcDH1_1363.EcDH1_0864,iEcE24377_1341.EcE24377A_3147,iEcSMS35_1347.EcSMS35_2974,iG2583_1286.G2583_3481,iJO1366.b2827,iJR904.b2827,iLF82_1304.LF82_2267,iNRG857_1313.NRG857_13965,iSSON_1240.SSON_2984,iUMN146_1321.UM146_02290,iUMNK88_1353.UMNK88_3511,iUTI89_1310.UTI89_C3229,iWFL_1372.ECW_m3069,iY75_1357.Y75_RS14705,iYL1228.KPN_03236,iZ_1308.Z4144,ic_1306.c3422 Thymidylat_synt QTD1_k127_3954227_7 215803.DB30_3560 2.672e-42 173.0 COG2940@1|root,COG2940@2|Bacteria,1MWFB@1224|Proteobacteria,438IX@68525|delta/epsilon subdivisions,2X3TU@28221|Deltaproteobacteria,2YX3A@29|Myxococcales 28221|Deltaproteobacteria S SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain - - - ko:K07117 - - - - ko00000 - - - SET QTD1_k127_3954227_0 1286093.C266_25625 2.921e-165 540.0 COG3158@1|root,COG3158@2|Bacteria,1MUVH@1224|Proteobacteria,2VH9I@28216|Betaproteobacteria,1K02F@119060|Burkholderiaceae 28216|Betaproteobacteria P Transport of potassium into the cell kup - - ko:K03549 - - - - ko00000,ko02000 2.A.72 - - K_trans QTD1_k127_3954227_6 187272.Mlg_0423 1.083e-54 196.0 COG0262@1|root,COG0262@2|Bacteria,1RH0P@1224|Proteobacteria,1S5VH@1236|Gammaproteobacteria,1WY75@135613|Chromatiales 135613|Chromatiales H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis - - 1.5.1.3 ko:K00287,ko:K18590 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 M00126,M00840 R00936,R00937,R00939,R00940,R02235,R02236,R11765 RC00109,RC00110,RC00158 br01600,ko00000,ko00001,ko00002,ko01000,ko01504 - - - DHFR_1 QTD1_k127_3954227_4 215803.DB30_3556 8.784e-75 273.0 COG1228@1|root,COG1228@2|Bacteria,1MVAF@1224|Proteobacteria,42MKS@68525|delta/epsilon subdivisions,2WKIH@28221|Deltaproteobacteria,2YYWU@29|Myxococcales 28221|Deltaproteobacteria Q Amidohydrolase family - - - - - - - - - - - - Amidohydro_1 QTD1_k127_3954227_3 215803.DB30_7171 6.131e-116 390.0 COG0654@1|root,COG0654@2|Bacteria,1R7UC@1224|Proteobacteria,433ZZ@68525|delta/epsilon subdivisions,2X4C3@28221|Deltaproteobacteria,2YYQK@29|Myxococcales 28221|Deltaproteobacteria H FAD binding domain - - 1.14.13.9 ko:K00486 ko00380,ko01100,map00380,map01100 M00038 R01960 RC00046 ko00000,ko00001,ko00002,ko01000 - - - FAD_binding_3 QTD1_k127_3954227_1 1384054.N790_04740 1.155e-153 500.0 COG3844@1|root,COG3844@2|Bacteria,1MUKN@1224|Proteobacteria,1RPY3@1236|Gammaproteobacteria,1X3FQ@135614|Xanthomonadales 135614|Xanthomonadales E Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively kynU GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016822,GO:0016823,GO:0019439,GO:0019441,GO:0019752,GO:0030429,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.7.1.3 ko:K01556 ko00380,ko01100,map00380,map01100 M00038 R00987,R02668,R03936 RC00284,RC00415 ko00000,ko00001,ko00002,ko01000 - - - Aminotran_5 QTD1_k127_3954227_8 1121897.AUGO01000001_gene1150 4.424e-30 123.0 COG1878@1|root,COG1878@2|Bacteria,4NFXM@976|Bacteroidetes,1HWQP@117743|Flavobacteriia,2NSD1@237|Flavobacterium 976|Bacteroidetes S Metal-dependent hydrolase - - - - - - - - - - - - Cyclase QTD1_k127_3958882_0 1255043.TVNIR_3436 3.169e-202 639.0 COG1875@1|root,COG1875@2|Bacteria,1MUX1@1224|Proteobacteria,1RMQN@1236|Gammaproteobacteria,1WWB1@135613|Chromatiales 135613|Chromatiales T SMART Nucleotide binding protein, PINc - - - ko:K07175 - - - - ko00000 - - - PIN_4,PhoH QTD1_k127_3958882_3 1123256.KB907937_gene1897 1.522e-57 203.0 COG1225@1|root,COG1225@2|Bacteria,1RD4R@1224|Proteobacteria,1RQ7F@1236|Gammaproteobacteria,1X6D3@135614|Xanthomonadales 135614|Xanthomonadales O Peroxiredoxin bcp - 1.11.1.15 ko:K03564 - - - - ko00000,ko01000 - - - AhpC-TSA QTD1_k127_3958882_4 349124.Hhal_2199 1.702e-55 202.0 COG2716@1|root,COG2716@2|Bacteria,1R7W7@1224|Proteobacteria,1RSDP@1236|Gammaproteobacteria,1WWJB@135613|Chromatiales 135613|Chromatiales E PFAM Amino acid-binding ACT - - - ko:K03567 ko02026,map02026 - - - ko00000,ko00001,ko03000 - - - ACT_6 QTD1_k127_3958882_2 713587.THITH_02600 1.083e-76 265.0 COG0329@1|root,COG0329@2|Bacteria,1MUCM@1224|Proteobacteria,1RNH9@1236|Gammaproteobacteria,1WWMV@135613|Chromatiales 135613|Chromatiales E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) dapA - 4.3.3.7 ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R10147 RC03062,RC03063 ko00000,ko00001,ko00002,ko01000 - - - DHDPS QTD1_k127_3958882_1 713586.KB900536_gene192 7.05e-155 505.0 COG2812@1|root,COG2812@2|Bacteria,1MVCK@1224|Proteobacteria,1RMIA@1236|Gammaproteobacteria,1WX0K@135613|Chromatiales 135613|Chromatiales L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity dnaX - 2.7.7.7 ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_delta2,DNA_pol3_gamma3,DNA_pol3_tau_5 QTD1_k127_3984351_7 1121127.JAFA01000025_gene2771 1.578e-118 410.0 COG2366@1|root,COG2366@2|Bacteria,1MVMH@1224|Proteobacteria,2VIWI@28216|Betaproteobacteria,1K590@119060|Burkholderiaceae 28216|Betaproteobacteria S penicillin amidase - - 3.5.1.11 ko:K01434 ko00311,ko01130,map00311,map01130 - R02170 RC00166,RC00328 ko00000,ko00001,ko01000,ko01002 - - - Penicil_amidase QTD1_k127_3984351_5 545264.KB898744_gene2062 3.565e-157 527.0 COG0469@1|root,COG0469@2|Bacteria,1MU21@1224|Proteobacteria,1RMW3@1236|Gammaproteobacteria,1WXEF@135613|Chromatiales 135613|Chromatiales G Belongs to the pyruvate kinase family - - 2.7.1.40 ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 M00001,M00002,M00049,M00050 R00200,R00430,R01138,R01858,R02320 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 - - - PK,PK_C QTD1_k127_3984351_4 187272.Mlg_2842 5.838e-167 532.0 COG0126@1|root,COG0126@2|Bacteria,1MUNU@1224|Proteobacteria,1RMUQ@1236|Gammaproteobacteria,1WX6Z@135613|Chromatiales 135613|Chromatiales F Belongs to the phosphoglycerate kinase family pgk - 2.7.2.3 ko:K00927 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01512 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000,ko04147 - - - PGK QTD1_k127_3984351_3 1123253.AUBD01000005_gene176 7.178e-173 547.0 COG0057@1|root,COG0057@2|Bacteria,1MU93@1224|Proteobacteria,1RMBM@1236|Gammaproteobacteria,1X34S@135614|Xanthomonadales 135614|Xanthomonadales G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family gapA - 1.2.1.12 ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01061 RC00149 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 - - - Gp_dh_C,Gp_dh_N QTD1_k127_3984351_0 519989.ECTPHS_09692 5.617e-280 879.0 COG0021@1|root,COG0021@2|Bacteria,1MUEY@1224|Proteobacteria,1RMWP@1236|Gammaproteobacteria,1WVWH@135613|Chromatiales 135613|Chromatiales G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate - - 2.2.1.1 ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R01067,R01641,R01830,R06590 RC00032,RC00226,RC00571,RC01560 ko00000,ko00001,ko00002,ko01000 - - - Transket_pyr,Transketolase_C,Transketolase_N QTD1_k127_3984351_10 1215092.PA6_017_00590 1.475e-61 222.0 COG1409@1|root,COG1409@2|Bacteria,1MWKX@1224|Proteobacteria,1RPA7@1236|Gammaproteobacteria,1YDP2@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria S Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes cpdA GO:0003674,GO:0003824,GO:0004112,GO:0004114,GO:0004115,GO:0005488,GO:0005506,GO:0008081,GO:0008150,GO:0008198,GO:0009987,GO:0016043,GO:0016787,GO:0016788,GO:0042545,GO:0042578,GO:0043167,GO:0043169,GO:0045229,GO:0046872,GO:0046914,GO:0071554,GO:0071555,GO:0071840 3.1.4.53 ko:K03651 ko00230,ko02025,map00230,map02025 - R00191 RC00296 ko00000,ko00001,ko01000 - - - Metallophos QTD1_k127_3984351_12 329726.AM1_4632 1.475e-44 181.0 COG3735@1|root,COG3735@2|Bacteria,1G6DE@1117|Cyanobacteria 1117|Cyanobacteria S TraB family - - - ko:K09973 - - - - ko00000 - - - TraB QTD1_k127_3984351_14 765912.Thimo_1943 3.377e-36 151.0 COG1266@1|root,COG1266@2|Bacteria,1R6Z1@1224|Proteobacteria,1RRIS@1236|Gammaproteobacteria,1WWN3@135613|Chromatiales 135613|Chromatiales S PFAM CAAX amino terminal protease family - - - ko:K07052 - - - - ko00000 - - - Abi QTD1_k127_3984351_11 1255043.TVNIR_2162 7.238e-53 199.0 COG0438@1|root,COG0438@2|Bacteria 2|Bacteria M transferase activity, transferring glycosyl groups - - - - - - - - - - - - Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1 QTD1_k127_3984351_13 326442.PSHAa2321 1.595e-39 169.0 COG1819@1|root,COG1819@2|Bacteria,1PJJ9@1224|Proteobacteria,1S07B@1236|Gammaproteobacteria,2PZVX@267888|Pseudoalteromonadaceae 1236|Gammaproteobacteria CG glycosyl - - - - - - - - - - - - - QTD1_k127_3984351_2 396588.Tgr7_2447 4.441e-189 612.0 COG0773@1|root,COG0773@2|Bacteria,1MUC5@1224|Proteobacteria,1RMMT@1236|Gammaproteobacteria,1WWVU@135613|Chromatiales 135613|Chromatiales M Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate mpl - 6.3.2.45 ko:K02558 - - - - ko00000,ko01000 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M QTD1_k127_3984351_8 1283300.ATXB01000001_gene649 5.472e-76 268.0 COG0349@1|root,COG0349@2|Bacteria,1MURV@1224|Proteobacteria,1RPBP@1236|Gammaproteobacteria,1XET3@135618|Methylococcales 135618|Methylococcales J Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides rnd - 3.1.13.5 ko:K03684 - - - - ko00000,ko01000,ko03016 - - - DNA_pol_A_exo1,HRDC QTD1_k127_3984351_9 713586.KB900536_gene2639 4.733e-67 238.0 COG0563@1|root,COG0563@2|Bacteria,1MXCZ@1224|Proteobacteria,1RMT6@1236|Gammaproteobacteria,1WX43@135613|Chromatiales 135613|Chromatiales F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism adk - 2.7.4.3 ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 M00049 R00127,R01547,R11319 RC00002 ko00000,ko00001,ko00002,ko01000,ko04147 - - - ADK,ADK_lid QTD1_k127_3984351_1 395493.BegalDRAFT_2506 9.017e-193 613.0 COG0205@1|root,COG0205@2|Bacteria,1MVN3@1224|Proteobacteria,1RMVY@1236|Gammaproteobacteria,4609F@72273|Thiotrichales 72273|Thiotrichales G Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions pfp - 2.7.1.11,2.7.1.90 ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130 - R00756,R00764,R02073,R03236,R04779 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PFK QTD1_k127_3984351_6 292415.Tbd_1500 4.26e-144 465.0 COG3808@1|root,COG3808@2|Bacteria,1MUQ3@1224|Proteobacteria,2VI3K@28216|Betaproteobacteria,1KSG5@119069|Hydrogenophilales 119069|Hydrogenophilales C Inorganic H+ pyrophosphatase - - 3.6.1.1 ko:K15987 ko00190,map00190 - - - ko00000,ko00001,ko01000 3.A.10.1 - - H_PPase QTD1_k127_4002528_0 234267.Acid_2647 4.001e-281 884.0 COG4409@1|root,COG4447@1|root,COG4409@2|Bacteria,COG4447@2|Bacteria,3Y6ZR@57723|Acidobacteria 57723|Acidobacteria M Sortilin, neurotensin receptor 3, - - - - - - - - - - - - Sortilin-Vps10 QTD1_k127_4002528_3 349124.Hhal_2264 8.901e-22 98.0 COG4391@1|root,COG4391@2|Bacteria,1N7QM@1224|Proteobacteria,1SHHF@1236|Gammaproteobacteria,1WZR6@135613|Chromatiales 135613|Chromatiales S Zinc-finger domain - - - - - - - - - - - - zf-CHCC QTD1_k127_4002528_1 314278.NB231_13021 4.863e-241 777.0 COG1391@1|root,COG1391@2|Bacteria,1MU4I@1224|Proteobacteria,1RP9N@1236|Gammaproteobacteria,1WXIK@135613|Chromatiales 135613|Chromatiales OT Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell glnE - 2.7.7.42,2.7.7.89 ko:K00982 - - - - ko00000,ko01000 - - - GlnD_UR_UTase,GlnE QTD1_k127_4002528_2 395493.BegalDRAFT_0278 2.715e-205 645.0 COG0459@1|root,COG0459@2|Bacteria,1MURR@1224|Proteobacteria,1RMTB@1236|Gammaproteobacteria,4600M@72273|Thiotrichales 72273|Thiotrichales O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions groL - - ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 - - - ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 - - - Cpn60_TCP1 QTD1_k127_4089104_8 1500894.JQNN01000001_gene4047 0.000539 43.0 COG2928@1|root,COG2928@2|Bacteria,1MWT5@1224|Proteobacteria,2VH65@28216|Betaproteobacteria,4732X@75682|Oxalobacteraceae 28216|Betaproteobacteria S Protein of unknown function (DUF502) - - - - - - - - - - - - DUF502 QTD1_k127_4089104_3 266117.Rxyl_0056 5.068e-128 417.0 COG1064@1|root,COG1064@2|Bacteria,2GNVQ@201174|Actinobacteria,4CPC1@84995|Rubrobacteria 84995|Rubrobacteria S Alcohol dehydrogenase GroES-like domain - - 1.1.1.1 ko:K13953 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 - R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310 RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273 ko00000,ko00001,ko01000 - - - ADH_N QTD1_k127_4089104_1 1123257.AUFV01000007_gene276 3.404e-265 830.0 COG0173@1|root,COG0173@2|Bacteria,1MUXB@1224|Proteobacteria,1RNMI@1236|Gammaproteobacteria,1X38N@135614|Xanthomonadales 135614|Xanthomonadales J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) aspS - 6.1.1.12 ko:K01876 ko00970,map00970 M00359,M00360 R05577 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - GAD,tRNA-synt_2,tRNA_anti-codon QTD1_k127_4089104_5 1234364.AMSF01000024_gene3801 1.067e-38 153.0 COG1073@1|root,COG1073@2|Bacteria,1R1F2@1224|Proteobacteria,1T507@1236|Gammaproteobacteria,1XDAJ@135614|Xanthomonadales 135614|Xanthomonadales S Alpha/beta hydrolase family - - - - - - - - - - - - Abhydrolase_6 QTD1_k127_4089104_0 187272.Mlg_1485 1.2e-322 1008.0 COG0249@1|root,COG0249@2|Bacteria,1MUGX@1224|Proteobacteria,1RNW3@1236|Gammaproteobacteria,1WVV0@135613|Chromatiales 135613|Chromatiales L that it carries out the mismatch recognition step. This protein has a weak ATPase activity mutS - - ko:K03555 ko03430,map03430 - - - ko00000,ko00001,ko03400 - - - MutS_I,MutS_II,MutS_III,MutS_IV,MutS_V QTD1_k127_4089104_4 76114.ebA3399 6.439e-43 163.0 COG1546@1|root,COG1546@2|Bacteria,1RH2Y@1224|Proteobacteria,2VSQF@28216|Betaproteobacteria,2KWIK@206389|Rhodocyclales 206389|Rhodocyclales S Belongs to the CinA family - - 3.5.1.42 ko:K03743 ko00760,map00760 - R02322 RC00100 ko00000,ko00001,ko01000 - - - CinA QTD1_k127_4089104_6 1283300.ATXB01000001_gene309 3.989e-23 109.0 COG1514@1|root,COG1514@2|Bacteria,1RDB2@1224|Proteobacteria,1SCZX@1236|Gammaproteobacteria,1XFHW@135618|Methylococcales 135618|Methylococcales J Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester - - 3.1.4.58 ko:K01975 - - - - ko00000,ko01000,ko03016 - - - LigT_PEase QTD1_k127_4089104_2 768671.ThimaDRAFT_1767 7.941e-169 536.0 COG0468@1|root,COG0468@2|Bacteria,1MU3C@1224|Proteobacteria,1RMHP@1236|Gammaproteobacteria,1WW13@135613|Chromatiales 135613|Chromatiales L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage recA - - ko:K03553 ko03440,map03440 M00729 - - ko00000,ko00001,ko00002,ko03400 - - - RecA QTD1_k127_4089104_7 519989.ECTPHS_12428 7.024e-10 63.0 COG2137@1|root,COG2137@2|Bacteria,1N6P6@1224|Proteobacteria,1SCMF@1236|Gammaproteobacteria,1WYJU@135613|Chromatiales 135613|Chromatiales S Modulates RecA activity recX - - ko:K03565 - - - - ko00000,ko03400 - - - RecX QTD1_k127_4145388_2 105559.Nwat_0450 2.761e-31 123.0 COG1171@1|root,COG1171@2|Bacteria,1MVWJ@1224|Proteobacteria,1RMY6@1236|Gammaproteobacteria,1WWPJ@135613|Chromatiales 135613|Chromatiales E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA ilvA - 4.3.1.19 ko:K01754 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230 M00570 R00220,R00996 RC00418,RC02600 ko00000,ko00001,ko00002,ko01000 - - - PALP,Thr_dehydrat_C QTD1_k127_4145388_1 948106.AWZT01000090_gene1096 2.277e-91 324.0 COG0628@1|root,COG0628@2|Bacteria,1MVX7@1224|Proteobacteria,2VIIX@28216|Betaproteobacteria,1K5CX@119060|Burkholderiaceae 28216|Betaproteobacteria S AI-2E family transporter - - - - - - - - - - - - AI-2E_transport QTD1_k127_4145388_3 1121861.KB899918_gene3300 0.0001281 50.0 COG0695@1|root,COG0695@2|Bacteria,1R2GN@1224|Proteobacteria,2TZK6@28211|Alphaproteobacteria,2JZ32@204441|Rhodospirillales 204441|Rhodospirillales O Protein of unknown function (DUF3429) - - - - - - - - - - - - DUF3429 QTD1_k127_4145388_0 1049564.TevJSym_ad00670 1.255e-137 460.0 COG4206@1|root,COG4206@2|Bacteria,1MW63@1224|Proteobacteria,1RMFJ@1236|Gammaproteobacteria,1J4YK@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria H COG4206 Outer membrane cobalamin receptor protein btuB GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0006810,GO:0006811,GO:0008150,GO:0015075,GO:0015267,GO:0015318,GO:0015889,GO:0015893,GO:0016020,GO:0016021,GO:0019904,GO:0022803,GO:0022838,GO:0022857,GO:0031224,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0050896,GO:0051179,GO:0051180,GO:0051181,GO:0051234,GO:0055085,GO:0071702,GO:0071705 - ko:K16092 - - - - ko00000,ko02000 1.B.14.3 - iECB_1328.ECB_03851,iECP_1309.ECP_4183,iSF_1195.SF4048,iS_1188.S3696 Plug,TonB_dep_Rec QTD1_k127_4185340_9 472759.Nhal_3813 1.574e-35 140.0 COG2922@1|root,COG2922@2|Bacteria,1RD5F@1224|Proteobacteria,1S43X@1236|Gammaproteobacteria,1WYZ6@135613|Chromatiales 135613|Chromatiales S Belongs to the Smg family smg - - ko:K03747 - - - - ko00000 - - - DUF494 QTD1_k127_4185340_0 713586.KB900536_gene2234 0.0 1033.0 COG0550@1|root,COG0550@2|Bacteria,1MUFZ@1224|Proteobacteria,1RNZ2@1236|Gammaproteobacteria,1WWWP@135613|Chromatiales 135613|Chromatiales L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone topA - 5.99.1.2 ko:K03168 - - - - ko00000,ko01000,ko03032,ko03400 - - - Topo_Zn_Ribbon,Topoisom_bac,Toprim,Toprim_C_rpt,zf-C4_Topoisom QTD1_k127_4185340_5 1121937.AUHJ01000010_gene1681 1.405e-85 297.0 COG0596@1|root,COG0596@2|Bacteria,1MVVX@1224|Proteobacteria,1T3KJ@1236|Gammaproteobacteria 1236|Gammaproteobacteria S hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - - - - - - - - - - Abhydrolase_1,Abhydrolase_6 QTD1_k127_4185340_3 314285.KT71_05512 1.549e-142 480.0 COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,1RPG7@1236|Gammaproteobacteria,1J8F1@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria IQ AMP-binding enzyme C-terminal domain - - - - - - - - - - - - AMP-binding,AMP-binding_C QTD1_k127_4185340_4 1117647.M5M_03950 7.767e-140 473.0 COG4774@1|root,COG4774@2|Bacteria,1NMCN@1224|Proteobacteria,1T3TQ@1236|Gammaproteobacteria,1JC38@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria P COG1629 Outer membrane receptor proteins, mostly Fe transport - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - Plug,TonB_dep_Rec QTD1_k127_4185340_7 1123503.KB908059_gene236 3.758e-70 246.0 COG1309@1|root,COG1309@2|Bacteria,1R6X5@1224|Proteobacteria,2U7EK@28211|Alphaproteobacteria,2KGFQ@204458|Caulobacterales 204458|Caulobacterales K regulatory protein TetR - - - - - - - - - - - - TetR_N QTD1_k127_4185340_8 452637.Oter_2382 5.866e-55 204.0 COG2961@1|root,COG2961@2|Bacteria,46XTP@74201|Verrucomicrobia,3K800@414999|Opitutae 414999|Opitutae S Specifically methylates the adenine in position 2030 of 23S rRNA rlmJ - 2.1.1.266 ko:K07115 - - - - ko00000,ko01000,ko03009 - - - RsmJ QTD1_k127_4185340_6 1523503.JPMY01000046_gene1161 1.885e-80 276.0 COG0169@1|root,COG0169@2|Bacteria,1MVH4@1224|Proteobacteria,1RPB7@1236|Gammaproteobacteria 1236|Gammaproteobacteria E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) aroE GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02413 RC00206 ko00000,ko00001,ko00002,ko01000 - - iAPECO1_1312.APECO1_3165,iECOK1_1307.ECOK1_3701,iECS88_1305.ECS88_3669,iECUMN_1333.ECUMN_3755,iSBO_1134.SBO_3275,iUMN146_1321.UM146_16315,iUTI89_1310.UTI89_C3726 Shikimate_DH,Shikimate_dh_N QTD1_k127_4185340_2 62928.azo0659 1.126e-160 518.0 COG1249@1|root,COG1249@2|Bacteria,1MU2Z@1224|Proteobacteria,2VHFA@28216|Betaproteobacteria,2KYJ7@206389|Rhodocyclales 206389|Rhodocyclales C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - 1.8.1.7 ko:K00383 ko00480,ko04918,map00480,map04918 - R00094,R00115 RC00011 ko00000,ko00001,ko01000 - - - Pyr_redox_2,Pyr_redox_dim QTD1_k127_4185340_1 634500.EbC_43110 9.277e-223 719.0 COG0339@1|root,COG0339@2|Bacteria,1MU1K@1224|Proteobacteria,1RMAH@1236|Gammaproteobacteria,3X60E@551|Erwinia 1236|Gammaproteobacteria E Oligopeptidase A prlC GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006465,GO:0006508,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0034641,GO:0034645,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051604,GO:0070011,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1901576 3.4.24.70 ko:K01414 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M3 QTD1_k127_4187990_13 1267534.KB906754_gene3801 4.092e-24 111.0 COG1228@1|root,COG1228@2|Bacteria,3Y39J@57723|Acidobacteria,2JIMA@204432|Acidobacteriia 204432|Acidobacteriia Q Amidohydrolase family - - - - - - - - - - - - Amidohydro_1 QTD1_k127_4187990_1 1049564.TevJSym_ac01890 2.887e-160 517.0 COG1160@1|root,COG1160@2|Bacteria,1MU9S@1224|Proteobacteria,1RMSF@1236|Gammaproteobacteria,1J4NG@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria S GTPase that plays an essential role in the late steps of ribosome biogenesis der GO:0000027,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0022613,GO:0022618,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032794,GO:0034622,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042273,GO:0043021,GO:0043022,GO:0043023,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363 - ko:K03977 - - - - ko00000,ko03009 - - - KH_dom-like,MMR_HSR1 QTD1_k127_4187990_6 83406.HDN1F_21810 7.213e-73 259.0 COG1520@1|root,COG1520@2|Bacteria,1MXIJ@1224|Proteobacteria,1RN4V@1236|Gammaproteobacteria 1236|Gammaproteobacteria M Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane bamB GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0008152,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0016491,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0042802,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0055114,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - ko:K17713 - - - - ko00000,ko02000 1.B.33.1 - - PQQ_2,PQQ_3 QTD1_k127_4187990_12 1121940.AUDZ01000015_gene1341 1.623e-26 119.0 COG2976@1|root,COG2976@2|Bacteria,1N117@1224|Proteobacteria,1S95P@1236|Gammaproteobacteria,1XKNB@135619|Oceanospirillales 135619|Oceanospirillales S protein conserved in bacteria - - - - - - - - - - - - TPR_21 QTD1_k127_4187990_2 396588.Tgr7_2048 1.659e-157 510.0 COG0124@1|root,COG0124@2|Bacteria,1MV2K@1224|Proteobacteria,1RPHI@1236|Gammaproteobacteria,1WWGZ@135613|Chromatiales 135613|Chromatiales J PFAM tRNA synthetase class II (G H P and S) hisS - 6.1.1.21 ko:K01892 ko00970,map00970 M00359,M00360 R03655 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - HGTP_anticodon,tRNA-synt_His QTD1_k127_4187990_14 1429851.X548_07185 3.752e-16 91.0 COG1426@1|root,COG1426@2|Bacteria,1N240@1224|Proteobacteria,1RQMV@1236|Gammaproteobacteria,1X5X4@135614|Xanthomonadales 135614|Xanthomonadales S protein conserved in bacteria - - - ko:K15539 - - - - ko00000 - - - DUF4115,HTH_25 QTD1_k127_4187990_11 1123257.AUFV01000008_gene711 2.555e-39 164.0 COG3063@1|root,COG3063@2|Bacteria,1MXPC@1224|Proteobacteria,1RY78@1236|Gammaproteobacteria,1X5IM@135614|Xanthomonadales 135614|Xanthomonadales NU type IV pilus biogenesis stability protein PilW pilF - - ko:K02656 - - - - ko00000,ko02035,ko02044 - - - TPR_10,TPR_16,TPR_17,TPR_2,TPR_6,TPR_8 QTD1_k127_4187990_4 1165096.ARWF01000001_gene87 9.404e-110 380.0 COG0820@1|root,COG0820@2|Bacteria,1MUYK@1224|Proteobacteria,2VIBN@28216|Betaproteobacteria,2KM5F@206350|Nitrosomonadales 206350|Nitrosomonadales J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs rlmN - 2.1.1.192 ko:K06941 - - - - ko00000,ko01000,ko03009 - - - Radical_SAM QTD1_k127_4187990_7 1415780.JPOG01000001_gene622 2.092e-62 220.0 COG0105@1|root,COG0105@2|Bacteria,1R9ZA@1224|Proteobacteria,1S1Z3@1236|Gammaproteobacteria,1X62I@135614|Xanthomonadales 135614|Xanthomonadales F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate ndk GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 ko:K00940 ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016 M00049,M00050,M00052,M00053 R00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895 RC00002 ko00000,ko00001,ko00002,ko01000,ko04131 - - - NDK QTD1_k127_4187990_10 1005995.GTPT_1426 2.431e-39 148.0 COG0316@1|root,COG0316@2|Bacteria,1RH6T@1224|Proteobacteria,1S5XD@1236|Gammaproteobacteria,4BV13@82986|Tatumella 1236|Gammaproteobacteria S Iron-sulphur cluster biosynthesis iscA GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0016530,GO:0019538,GO:0022607,GO:0031163,GO:0034986,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051540,GO:0051604,GO:0071704,GO:0071840,GO:0097428,GO:0140104,GO:1901564 - ko:K05997,ko:K13628 - - - - ko00000,ko03016 - - iAPECO1_1312.APECO1_3997,iB21_1397.B21_02384,iBWG_1329.BWG_2292,iE2348C_1286.E2348C_2811,iEC042_1314.EC042_2732,iEC55989_1330.EC55989_2813,iECABU_c1320.ECABU_c28340,iECBD_1354.ECBD_1156,iECB_1328.ECB_02420,iECDH10B_1368.ECDH10B_2695,iECD_1391.ECD_02420,iECED1_1282.ECED1_2959,iECIAI1_1343.ECIAI1_2580,iECIAI39_1322.ECIAI39_2729,iECNA114_1301.ECNA114_2607,iECO103_1326.ECO103_3045,iECO111_1330.ECO111_3252,iECO26_1355.ECO26_3575,iECOK1_1307.ECOK1_2877,iECP_1309.ECP_2533,iECS88_1305.ECS88_2704,iECSE_1348.ECSE_2814,iECSF_1327.ECSF_2372,iECSP_1301.ECSP_3472,iECUMN_1333.ECUMN_2848,iECW_1372.ECW_m2754,iECs_1301.ECs3394,iEKO11_1354.EKO11_1205,iETEC_1333.ETEC_2685,iEcDH1_1363.EcDH1_1140,iEcSMS35_1347.EcSMS35_2681,iEcolC_1368.EcolC_1149,iG2583_1286.G2583_3058,iJO1366.b2528,iLF82_1304.LF82_1120,iNRG857_1313.NRG857_12580,iSBO_1134.SBO_2552,iSDY_1059.SDY_2724,iSF_1195.SF2575,iSSON_1240.SSON_2610,iS_1188.S2747,iUMN146_1321.UM146_04060,iUMNK88_1353.UMNK88_3181,iWFL_1372.ECW_m2754,iY75_1357.Y75_RS13195,iZ_1308.Z3795,ic_1306.c3053 Fe-S_biosyn QTD1_k127_4187990_3 1484158.PSNIH1_01390 1.552e-123 419.0 COG1104@1|root,COG1104@2|Bacteria,1MU1C@1224|Proteobacteria,1RNCD@1236|Gammaproteobacteria,3VYXQ@53335|Pantoea 1236|Gammaproteobacteria H Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins iscS GO:0001522,GO:0003674,GO:0003824,GO:0004123,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009000,GO:0009058,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016226,GO:0016740,GO:0016769,GO:0016782,GO:0016783,GO:0016829,GO:0016846,GO:0018130,GO:0018131,GO:0019842,GO:0022607,GO:0030170,GO:0031071,GO:0031119,GO:0031163,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046484,GO:0048037,GO:0050662,GO:0051186,GO:0070279,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097163,GO:0140104,GO:1901360,GO:1901363 2.8.1.7 ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 - R07460,R11528,R11529 RC01789,RC02313 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 - - iPC815.YPO2896,iYL1228.KPN_02862 Aminotran_5 QTD1_k127_4187990_8 1123368.AUIS01000004_gene248 3.085e-58 210.0 COG0565@1|root,COG0565@2|Bacteria,1N47Y@1224|Proteobacteria,1RPD3@1236|Gammaproteobacteria,2NBQP@225057|Acidithiobacillales 225057|Acidithiobacillales J Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA trmJ - 2.1.1.200 ko:K15396 - - - - ko00000,ko01000,ko03016 - - - SpoU_methylase QTD1_k127_4187990_5 1207076.ALAT01000147_gene283 5.499e-98 329.0 COG0483@1|root,COG0483@2|Bacteria,1MUQT@1224|Proteobacteria,1RNME@1236|Gammaproteobacteria,1Z01S@136846|Pseudomonas stutzeri group 1236|Gammaproteobacteria G COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family suhB - 3.1.3.25 ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 M00131 R01185,R01186,R01187 RC00078 ko00000,ko00001,ko00002,ko01000 - - - Inositol_P QTD1_k127_4187990_0 1278073.MYSTI_03669 4.252e-174 560.0 COG0531@1|root,COG0531@2|Bacteria,1MXNJ@1224|Proteobacteria,42PEH@68525|delta/epsilon subdivisions,2X5ME@28221|Deltaproteobacteria,2Z33D@29|Myxococcales 28221|Deltaproteobacteria E C-terminus of AA_permease - - - ko:K03294 - - - - ko00000 2.A.3.2 - - AA_permease_2 QTD1_k127_4187990_9 740709.A10D4_00360 5.734e-50 181.0 COG0861@1|root,COG0861@2|Bacteria,1MWC9@1224|Proteobacteria,1T1GE@1236|Gammaproteobacteria,2QF8T@267893|Idiomarinaceae 1236|Gammaproteobacteria P Integral membrane protein TerC family ygdQ GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - - - - - - - - - - TerC QTD1_k127_4201042_8 322710.Avin_26160 2.23e-125 410.0 COG1228@1|root,COG1228@2|Bacteria,1MUYR@1224|Proteobacteria,1RMI9@1236|Gammaproteobacteria 1236|Gammaproteobacteria Q 'catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway' hutI - 3.5.2.7 ko:K01468 ko00340,ko01100,map00340,map01100 M00045 R02288 RC00683 ko00000,ko00001,ko00002,ko01000 - - - Amidohydro_1,Amidohydro_3 QTD1_k127_4201042_5 391600.ABRU01000040_gene1726 7.432e-174 565.0 COG2986@1|root,COG2986@2|Bacteria,1MU6K@1224|Proteobacteria,2TSPJ@28211|Alphaproteobacteria,2KF5U@204458|Caulobacterales 204458|Caulobacterales E Catalyzes the degradation of histidine to urocanate and ammmonia hutH - 4.3.1.3 ko:K01745 ko00340,ko01100,map00340,map01100 M00045 R01168 RC00361 ko00000,ko00001,ko00002,ko01000 - - - Lyase_aromatic QTD1_k127_4201042_11 314278.NB231_12531 1.351e-24 104.0 COG1551@1|root,COG1551@2|Bacteria,1N6PG@1224|Proteobacteria,1SCB4@1236|Gammaproteobacteria,1WZ9Q@135613|Chromatiales 135613|Chromatiales J Could accelerate the degradation of some genes transcripts potentially through selective RNA binding csrA - - ko:K03563 ko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111 - - - ko00000,ko00001,ko03019 - - - CsrA QTD1_k127_4201042_3 69395.JQLZ01000004_gene648 7.684e-205 653.0 COG1263@1|root,COG1264@1|root,COG1263@2|Bacteria,COG1264@2|Bacteria,1MY1V@1224|Proteobacteria,2U1WG@28211|Alphaproteobacteria,2KHNX@204458|Caulobacterales 204458|Caulobacterales G PTS system, N-acetylglucosamine-specific - - 2.7.1.193 ko:K02803,ko:K02804 ko00520,ko02060,map00520,map02060 M00267 R05199 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.1.1.15,4.A.1.1.2,4.A.1.1.5,4.A.1.1.7 - - PTS_EIIB,PTS_EIIC QTD1_k127_4201042_2 366602.Caul_0294 4.81e-231 757.0 COG1080@1|root,COG2190@1|root,COG1080@2|Bacteria,COG2190@2|Bacteria,1MUT8@1224|Proteobacteria,2TR28@28211|Alphaproteobacteria,2KIAS@204458|Caulobacterales 204458|Caulobacterales G PTS system, glucose subfamily, IIA - - - ko:K11189 - - - - ko00000,ko02000 4.A.2.1 - - PEP-utilisers_N,PEP-utilizers,PEP-utilizers_C,PTS-HPr,PTS_EIIA_1 QTD1_k127_4201042_4 1449076.JOOE01000002_gene984 6.504e-188 617.0 COG3525@1|root,COG3525@2|Bacteria,1MVDE@1224|Proteobacteria,2TSK6@28211|Alphaproteobacteria,2K1S6@204457|Sphingomonadales 204457|Sphingomonadales G Glycosyl hydrolase family 20, catalytic domain - - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - CHB_HEX_C_1,Fn3_assoc,Glyco_hydro_20,Glyco_hydro_20b QTD1_k127_4201042_7 1005048.CFU_3248 8.032e-126 412.0 COG2850@1|root,COG2850@2|Bacteria,1MUAC@1224|Proteobacteria,2WBK9@28216|Betaproteobacteria,4760H@75682|Oxalobacteraceae 28216|Betaproteobacteria S A domain family that is part of the cupin metalloenzyme superfamily. - - - - - - - - - - - - Cupin_8 QTD1_k127_4201042_1 1123073.KB899242_gene1304 4.73e-236 740.0 COG0654@1|root,COG0654@2|Bacteria,1NSGN@1224|Proteobacteria,1T22A@1236|Gammaproteobacteria,1XA19@135614|Xanthomonadales 135614|Xanthomonadales CH Tryptophan halogenase - - - - - - - - - - - - Trp_halogenase QTD1_k127_4201042_0 1005048.CFU_2990 3.169e-286 907.0 COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,1MV8W@1224|Proteobacteria,2WBNE@28216|Betaproteobacteria,4765K@75682|Oxalobacteraceae 28216|Betaproteobacteria P TonB dependent receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - Plug,TonB_dep_Rec QTD1_k127_4201042_10 29581.BW37_05369 8.455e-110 360.0 COG2188@1|root,COG2188@2|Bacteria,1P6ZJ@1224|Proteobacteria,2VMVF@28216|Betaproteobacteria,4765X@75682|Oxalobacteraceae 28216|Betaproteobacteria K UTRA - - - ko:K03710 - - - - ko00000,ko03000 - - - GntR,UTRA QTD1_k127_4201042_9 190650.CC_0444 1.724e-124 407.0 COG2222@1|root,COG2222@2|Bacteria,1MXC7@1224|Proteobacteria,2TUJY@28211|Alphaproteobacteria,2KHS0@204458|Caulobacterales 204458|Caulobacterales M Sigma factor regulator FecR - - 2.6.1.16 ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 - R00768 RC00010,RC00163,RC02752 ko00000,ko00001,ko01000,ko01002 - - - SIS QTD1_k127_4201042_6 745310.G432_02380 1.063e-136 445.0 COG1820@1|root,COG1820@2|Bacteria,1MW8Y@1224|Proteobacteria,2TRBT@28211|Alphaproteobacteria,2K1SE@204457|Sphingomonadales 204457|Sphingomonadales G Belongs to the metallo-dependent hydrolases superfamily. NagA family - - 3.5.1.25 ko:K01443 ko00520,ko01130,map00520,map01130 - R02059 RC00166,RC00300 ko00000,ko00001,ko01000 - - - Amidohydro_1 QTD1_k127_4208946_4 522306.CAP2UW1_3214 4.286e-37 141.0 COG4447@1|root,COG4447@2|Bacteria,1ND1J@1224|Proteobacteria,2VMA5@28216|Betaproteobacteria 28216|Betaproteobacteria S protein related to plant photosystem II stability assembly factor - - - - - - - - - - - - - QTD1_k127_4208946_5 713586.KB900536_gene2398 1.202e-23 102.0 COG1977@1|root,COG1977@2|Bacteria,1N9QE@1224|Proteobacteria 1224|Proteobacteria H ThiS family - - - ko:K03636 ko04122,map04122 - - - ko00000,ko00001 - - - ThiS QTD1_k127_4208946_1 765420.OSCT_2074 2.552e-98 342.0 COG0476@1|root,COG0607@1|root,COG0476@2|Bacteria,COG0607@2|Bacteria,2G5TN@200795|Chloroflexi,376KE@32061|Chloroflexia 32061|Chloroflexia HP PFAM UBA THIF-type NAD FAD binding protein - - 2.7.7.80,2.8.1.11 ko:K21029,ko:K21147 ko04122,map04122 - R07459,R07461 RC00043 ko00000,ko00001,ko01000 - - - Rhodanese,ThiF QTD1_k127_4208946_2 404589.Anae109_3325 4.588e-97 323.0 COG1611@1|root,COG1611@2|Bacteria,1MU6N@1224|Proteobacteria,42P56@68525|delta/epsilon subdivisions,2WK5J@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Belongs to the LOG family - - 3.2.2.10 ko:K06966 ko00230,ko00240,map00230,map00240 - R00182,R00510 RC00063,RC00318 ko00000,ko00001,ko01000 - - - Lysine_decarbox QTD1_k127_4208946_3 526227.Mesil_0814 2.511e-69 246.0 COG2120@1|root,COG2120@2|Bacteria,1WJ9F@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S GlcNAc-PI de-N-acetylase - - - - - - - - - - - - PIG-L QTD1_k127_4208946_0 301.JNHE01000001_gene459 2.557e-99 345.0 COG1502@1|root,COG1502@2|Bacteria,1MWUW@1224|Proteobacteria,1RP0T@1236|Gammaproteobacteria,1YDHY@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria I Phospholipase D. Active site motifs. - - - - - - - - - - - - PLDc_2 QTD1_k127_4208946_6 1120934.KB894428_gene1767 9.909e-11 70.0 2E4BC@1|root,32Z70@2|Bacteria,2GN4P@201174|Actinobacteria,4E6F3@85010|Pseudonocardiales 201174|Actinobacteria S Domain of unknown function (DUF4184) - - - - - - - - - - - - DUF4184 QTD1_k127_4215197_6 443598.AUFA01000010_gene375 9.705e-140 453.0 COG2059@1|root,COG2059@2|Bacteria,1MUBW@1224|Proteobacteria,2TRXF@28211|Alphaproteobacteria,3JSVF@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria P TIGRFAM chromate transporter, chromate ion transporter (CHR) family chrA - - ko:K07240 - - - - ko00000,ko02000 2.A.51.1 - - Chromate_transp QTD1_k127_4215197_11 1123270.ATUR01000004_gene1500 1.232e-26 123.0 COG3577@1|root,COG3577@2|Bacteria,1MYAD@1224|Proteobacteria,2U9RE@28211|Alphaproteobacteria,2K4GD@204457|Sphingomonadales 204457|Sphingomonadales S gag-polyprotein putative aspartyl protease - - - - - - - - - - - - Asp_protease_2 QTD1_k127_4215197_3 497321.C664_09655 1.766e-157 500.0 COG0175@1|root,COG0175@2|Bacteria,1MUCZ@1224|Proteobacteria,2VJH9@28216|Betaproteobacteria,2KVVW@206389|Rhodocyclales 206389|Rhodocyclales H COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase and related enzymes cysD - 2.7.7.4 ko:K00957 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 M00176,M00596 R00529,R04929 RC02809,RC02889 ko00000,ko00001,ko00002,ko01000 - - - PAPS_reduct QTD1_k127_4215197_0 1292034.OR37_01172 4.322e-292 923.0 COG0529@1|root,COG2895@1|root,COG0529@2|Bacteria,COG2895@2|Bacteria,1MUD9@1224|Proteobacteria,2TQNJ@28211|Alphaproteobacteria,2KF08@204458|Caulobacterales 204458|Caulobacterales H Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily cysC - 2.7.1.25,2.7.7.4 ko:K00955 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 M00176 R00509,R00529,R04928,R04929 RC00002,RC00078,RC02809,RC02889 ko00000,ko00001,ko00002,ko01000 - - - APS_kinase,GTP_EFTU QTD1_k127_4215197_8 2340.JV46_24910 4.729e-88 299.0 COG1218@1|root,COG1218@2|Bacteria,1N0GY@1224|Proteobacteria,1RP5A@1236|Gammaproteobacteria,1J5ZG@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria P COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase cysQ GO:0000103,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006790,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008252,GO:0008441,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872 3.1.3.7 ko:K01082 ko00920,ko01100,ko01120,ko01130,map00920,map01100,map01120,map01130 - R00188,R00508 RC00078 ko00000,ko00001,ko01000,ko03016 - - iAPECO1_1312.APECO1_2172,iE2348C_1286.E2348C_4545,iEC042_1314.EC042_4695,iEC55989_1330.EC55989_4774,iECABU_c1320.ECABU_c47840,iECIAI1_1343.ECIAI1_4448,iECIAI39_1322.ECIAI39_4686,iECO103_1326.ECO103_5013,iECO111_1330.ECO111_5101,iECO26_1355.ECO26_5384,iECOK1_1307.ECOK1_4735,iECP_1309.ECP_4468,iECSE_1348.ECSE_4520,iECSF_1327.ECSF_4108,iECUMN_1333.ECUMN_4751,iECW_1372.ECW_m4578,iEKO11_1354.EKO11_4094,iEcE24377_1341.EcE24377A_4785,iEcHS_1320.EcHS_A4468,iEcSMS35_1347.EcSMS35_4694,iLF82_1304.LF82_0422,iNRG857_1313.NRG857_21455,iSBO_1134.SBO_4229,iSDY_1059.SDY_4385,iSSON_1240.SSON_4399,iSbBS512_1146.SbBS512_E4758,iUMN146_1321.UM146_21355,iUTI89_1310.UTI89_C4823,iWFL_1372.ECW_m4578,ic_1306.c5313 Inositol_P QTD1_k127_4215197_9 1121127.JAFA01000002_gene1754 1.243e-52 188.0 COG1522@1|root,COG1522@2|Bacteria,1MZ9D@1224|Proteobacteria,2VSJ1@28216|Betaproteobacteria,1K775@119060|Burkholderiaceae 28216|Betaproteobacteria K helix_turn_helix ASNC type - - - - - - - - - - - - AsnC_trans_reg,HTH_24,HTH_AsnC-type QTD1_k127_4215197_4 296591.Bpro_4602 8.276e-154 494.0 COG2423@1|root,COG2423@2|Bacteria,1MWH6@1224|Proteobacteria,2VHIM@28216|Betaproteobacteria,4ABP6@80864|Comamonadaceae 28216|Betaproteobacteria E PFAM Ornithine cyclodeaminase mu-crystallin arcB - 4.3.1.12 ko:K01750 ko00330,ko01110,ko01130,ko01230,map00330,map01110,map01130,map01230 - R00671 RC00354 ko00000,ko00001,ko01000 - - - OCD_Mu_crystall QTD1_k127_4215197_5 358220.C380_22420 1.041e-143 481.0 COG0010@1|root,COG0010@2|Bacteria,1MVFH@1224|Proteobacteria,2VJU2@28216|Betaproteobacteria,4AB3J@80864|Comamonadaceae 28216|Betaproteobacteria E Belongs to the arginase family rocF - 3.5.3.1,3.5.3.11,3.5.3.17,3.5.3.7 ko:K01476,ko:K01480,ko:K12255,ko:K18459 ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146 M00029,M00133,M00134 R00551,R01157,R01990 RC00024,RC00329 ko00000,ko00001,ko00002,ko01000 - - - Arginase QTD1_k127_4215197_10 1122604.JONR01000042_gene3451 2.502e-40 159.0 2EBUX@1|root,335UE@2|Bacteria,1NAYE@1224|Proteobacteria,1T8Q1@1236|Gammaproteobacteria,1XB2A@135614|Xanthomonadales 135614|Xanthomonadales - - - - - - - - - - - - - - - QTD1_k127_4215197_12 172088.AUGA01000002_gene6094 1.213e-23 103.0 COG3360@1|root,COG3360@2|Bacteria,1N6YT@1224|Proteobacteria,2UFPQ@28211|Alphaproteobacteria,3K28A@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria S Dodecin - - - ko:K09165 - - - - ko00000 - - - Dodecin QTD1_k127_4215197_7 296591.Bpro_4755 6.185e-111 362.0 COG1794@1|root,COG1794@2|Bacteria,1MV03@1224|Proteobacteria,2VHS8@28216|Betaproteobacteria,4ACWG@80864|Comamonadaceae 28216|Betaproteobacteria M Belongs to the aspartate glutamate racemases family - - 5.1.1.13 ko:K01779 ko00250,ko01054,map00250,map01054 - R00491 RC00302 ko00000,ko00001,ko01000 - - - Asp_Glu_race QTD1_k127_4215197_2 99598.Cal7507_2182 1.403e-203 659.0 COG1505@1|root,COG1505@2|Bacteria,1G1B7@1117|Cyanobacteria,1HJE5@1161|Nostocales 1117|Cyanobacteria E PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain - - 3.4.21.26 ko:K01322 ko04614,map04614 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S9,Peptidase_S9_N QTD1_k127_4215197_1 1122604.JONR01000020_gene527 2.621e-268 833.0 COG4670@1|root,COG4670@2|Bacteria,1MX9F@1224|Proteobacteria,1RMW2@1236|Gammaproteobacteria,1X4X7@135614|Xanthomonadales 135614|Xanthomonadales I Malonate decarboxylase mdcA - 2.3.1.187 ko:K13929 - - R08944 RC00012,RC00014 ko00000,ko01000,ko02000 3.B.1.1.4 - - Mal_decarbox_Al QTD1_k127_4220121_2 269482.Bcep1808_0516 1.374e-55 197.0 COG1541@1|root,COG1541@2|Bacteria,1MV1W@1224|Proteobacteria,2VI46@28216|Betaproteobacteria,1K11N@119060|Burkholderiaceae 28216|Betaproteobacteria H Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) paaK - 6.2.1.30 ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 - R02539 RC00004,RC00014 ko00000,ko00001,ko01000 - - - AMP-binding,AMP-binding_C_2 QTD1_k127_4220121_1 1408224.SAMCCGM7_c3418 1.112e-104 357.0 COG0508@1|root,COG0508@2|Bacteria,1R0J5@1224|Proteobacteria,2U28K@28211|Alphaproteobacteria,4BATY@82115|Rhizobiaceae 28211|Alphaproteobacteria C e3 binding domain - - 2.3.1.61 ko:K00658 ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00032 R02570,R02571,R08549 RC00004,RC02727,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - 2-oxoacid_dh,Biotin_lipoyl,E3_binding QTD1_k127_4220121_0 518766.Rmar_1549 1.764e-293 915.0 COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,4NE71@976|Bacteroidetes,1FIUV@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes C dehydrogenase, E1 component bfmBAB - 1.2.4.4 ko:K11381 ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130 M00036 R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997 RC00027,RC00627,RC02743,RC02883,RC02949,RC02953 br01601,ko00000,ko00001,ko00002,ko01000 - - - E1_dh,Transket_pyr,Transketolase_C QTD1_k127_4220121_3 1411685.U062_00018 1.428e-34 136.0 COG1522@1|root,COG1522@2|Bacteria,1MX7R@1224|Proteobacteria,1RPGA@1236|Gammaproteobacteria,1J5XF@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria K COG1522 Transcriptional regulators ybaO - - ko:K03719,ko:K05800 - - - - ko00000,ko03000,ko03036 - - - AsnC_trans_reg,HTH_24,HTH_AsnC-type QTD1_k127_4222227_15 1150600.ADIARSV_3850 1.026e-27 120.0 COG0586@1|root,COG0586@2|Bacteria,4NHQA@976|Bacteroidetes,1IR8N@117747|Sphingobacteriia 976|Bacteroidetes S PFAM SNARE associated Golgi protein - - - ko:K03975 - - - - ko00000 - - - SNARE_assoc QTD1_k127_4222227_1 686340.Metal_2685 2.444e-104 354.0 COG0793@1|root,COG0793@2|Bacteria,1MU39@1224|Proteobacteria,1RMSR@1236|Gammaproteobacteria,1XEI9@135618|Methylococcales 135618|Methylococcales M Belongs to the peptidase S41A family - - 3.4.21.102 ko:K03797 - - - - ko00000,ko01000,ko01002 - - - PDZ_2,Peptidase_S41 QTD1_k127_4222227_5 105559.Nwat_2894 1.313e-84 309.0 COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,1RM8A@1236|Gammaproteobacteria,1WVZ7@135613|Chromatiales 135613|Chromatiales T Diguanylate cyclase - - - - - - - - - - - - EAL,GGDEF,HAMP,PAS,PAS_3,PAS_4,Response_reg QTD1_k127_4222227_7 349124.Hhal_1211 1.39e-65 239.0 COG4942@1|root,COG4942@2|Bacteria,1MY3E@1224|Proteobacteria,1RPQP@1236|Gammaproteobacteria,1WX4I@135613|Chromatiales 135613|Chromatiales D PFAM peptidase - - - - - - - - - - - - Peptidase_M23 QTD1_k127_4222227_20 1470593.BW43_04454 1.623e-21 99.0 COG0607@1|root,COG0607@2|Bacteria,1MZ83@1224|Proteobacteria,1S68R@1236|Gammaproteobacteria 1236|Gammaproteobacteria P sulfurtransferase - - - - - - - - - - - - Rhodanese QTD1_k127_4222227_17 1123519.PSJM300_18170 3.548e-24 104.0 COG0695@1|root,COG0695@2|Bacteria,1N72P@1224|Proteobacteria,1SCA2@1236|Gammaproteobacteria,1Z38N@136846|Pseudomonas stutzeri group 1236|Gammaproteobacteria O Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins grxC - - ko:K03676 - - - - ko00000,ko03110 - - - Glutaredoxin QTD1_k127_4222227_12 1278309.KB907104_gene951 3.466e-36 142.0 COG1952@1|root,COG1952@2|Bacteria,1RI75@1224|Proteobacteria,1S62H@1236|Gammaproteobacteria,1XK48@135619|Oceanospirillales 135619|Oceanospirillales U One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA secB - - ko:K03071 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044,ko03110 3.A.5 - - SecB QTD1_k127_4222227_2 870187.Thini_2009 1.787e-102 343.0 COG0240@1|root,COG0240@2|Bacteria,1MUU3@1224|Proteobacteria,1RPQ7@1236|Gammaproteobacteria,45ZQK@72273|Thiotrichales 72273|Thiotrichales I Glycerol-3-phosphate dehydrogenase gpsA - 1.1.1.94 ko:K00057 ko00564,ko01110,map00564,map01110 - R00842,R00844 RC00029 ko00000,ko00001,ko01000 - - - NAD_Gly3P_dh_C,NAD_Gly3P_dh_N QTD1_k127_4222227_24 1121015.N789_12070 3.088e-08 60.0 2APC5@1|root,31EED@2|Bacteria,1QBPZ@1224|Proteobacteria,1T79X@1236|Gammaproteobacteria,1X904@135614|Xanthomonadales 135614|Xanthomonadales - - - - - - - - - - - - - - - QTD1_k127_4222227_14 1163409.UUA_03238 1.966e-31 129.0 2EJW8@1|root,33DKZ@2|Bacteria,1P677@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - QTD1_k127_4222227_4 1437824.BN940_12491 1.296e-87 298.0 COG1073@1|root,COG1073@2|Bacteria,1N03B@1224|Proteobacteria,2VV1P@28216|Betaproteobacteria,3T6X2@506|Alcaligenaceae 28216|Betaproteobacteria S Alpha/beta hydrolase family - - - - - - - - - - - - Abhydrolase_6,Hydrolase_4 QTD1_k127_4222227_21 717774.Marme_3793 1.15e-12 73.0 2F71N@1|root,33ZH9@2|Bacteria,1NXSR@1224|Proteobacteria,1SPX7@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_4222227_10 1403819.BATR01000120_gene4236 1.452e-41 164.0 COG0454@1|root,COG0456@2|Bacteria 2|Bacteria K acetyltransferase aac GO:0003674,GO:0003824,GO:0008080,GO:0008150,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0034069,GO:0042221,GO:0046677,GO:0047663,GO:0050896 2.3.1.82 ko:K18816 - - - - br01600,ko00000,ko01000,ko01504 - - - Acetyltransf_1 QTD1_k127_4222227_3 1122223.KB890687_gene2601 1.111e-94 321.0 COG2267@1|root,COG2267@2|Bacteria,1WNIJ@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus I alpha/beta hydrolase fold - - - - - - - - - - - - - QTD1_k127_4222227_13 595537.Varpa_2356 5.314e-36 139.0 COG5470@1|root,COG5470@2|Bacteria,1N012@1224|Proteobacteria,2WFG0@28216|Betaproteobacteria 28216|Betaproteobacteria S Domain of unknown function (DUF1330) - - - - - - - - - - - - DUF1330 QTD1_k127_4222227_9 1267533.KB906737_gene1984 3.012e-48 189.0 COG4270@1|root,COG4270@2|Bacteria,3Y68W@57723|Acidobacteria 57723|Acidobacteria S DoxX - - - - - - - - - - - - DoxX QTD1_k127_4222227_11 452637.Oter_3105 3.201e-36 147.0 COG2020@1|root,COG2020@2|Bacteria,46WMG@74201|Verrucomicrobia 74201|Verrucomicrobia O Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - - - - - - - - - - PEMT QTD1_k127_4222227_8 1267534.KB906754_gene3368 5.432e-49 179.0 COG5649@1|root,COG5649@2|Bacteria,3Y4QH@57723|Acidobacteria,2JMZM@204432|Acidobacteriia 204432|Acidobacteriia S Domain of unknown function (DU1801) - - - - - - - - - - - - DUF1801 QTD1_k127_4222227_6 1501230.ET33_13240 6.854e-84 284.0 COG2227@1|root,COG2227@2|Bacteria 2|Bacteria H 3-demethylubiquinone-9 3-O-methyltransferase activity - - 2.7.1.83 ko:K16328 ko00240,map00240 - R03315 RC00002,RC00017 ko00000,ko00001,ko01000 - - - Methyltransf_11,Methyltransf_23,Methyltransf_25 QTD1_k127_4222227_18 768671.ThimaDRAFT_4406 8.846e-23 109.0 COG0664@1|root,COG0664@2|Bacteria,1RD80@1224|Proteobacteria,1S4Q2@1236|Gammaproteobacteria,1WY7A@135613|Chromatiales 135613|Chromatiales T PFAM Cyclic nucleotide-binding - - - - - - - - - - - - cNMP_binding QTD1_k127_4222227_19 398578.Daci_1820 9.772e-22 97.0 2E4I3@1|root,32ZD6@2|Bacteria,1N6SY@1224|Proteobacteria,2VW12@28216|Betaproteobacteria,4AFF4@80864|Comamonadaceae 28216|Betaproteobacteria S Protein of unknown function (DUF3079) - - - - - - - - - - - - DUF3079 QTD1_k127_4222227_16 1122603.ATVI01000005_gene3787 1.232e-25 117.0 COG3687@1|root,COG3687@2|Bacteria,1RFZ0@1224|Proteobacteria,1SN3T@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Predicted metal-dependent hydrolase - - - ko:K07044 - - - - ko00000 - - - Metal_hydrol QTD1_k127_4222227_0 1095769.CAHF01000022_gene305 1.077e-118 387.0 COG0500@1|root,COG2226@2|Bacteria,1NWX3@1224|Proteobacteria,2VH8H@28216|Betaproteobacteria 28216|Betaproteobacteria Q Methyltransferase - - - - - - - - - - - - Methyltransf_11,Methyltransf_25 QTD1_k127_4287642_2 1123073.KB899241_gene2140 6.902e-67 247.0 COG0189@1|root,COG0189@2|Bacteria,1MV29@1224|Proteobacteria,1SB70@1236|Gammaproteobacteria,1X81A@135614|Xanthomonadales 135614|Xanthomonadales HJ COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) - - - - - - - - - - - - - QTD1_k127_4287642_1 1122599.AUGR01000011_gene4116 4.324e-92 310.0 COG0842@1|root,COG0842@2|Bacteria,1MUH1@1224|Proteobacteria,1RP0Z@1236|Gammaproteobacteria,1XH6D@135619|Oceanospirillales 135619|Oceanospirillales V Transport permease protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane QTD1_k127_4287642_0 1049564.TevJSym_ac01650 1.054e-126 416.0 COG1131@1|root,COG1131@2|Bacteria,1MUW7@1224|Proteobacteria,1RMC5@1236|Gammaproteobacteria,1J4MD@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria V COG1131 ABC-type multidrug transport system, ATPase component yadG GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran QTD1_k127_4287642_3 1215092.PA6_008_01260 4.187e-52 198.0 COG2199@1|root,COG3706@2|Bacteria,1RDWG@1224|Proteobacteria,1S7W2@1236|Gammaproteobacteria,1YEDJ@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria T diguanylate cyclase - - - - - - - - - - - - GGDEF QTD1_k127_4289534_7 614083.AWQR01000039_gene1480 5.109e-98 326.0 COG3842@1|root,COG3842@2|Bacteria,1MU3I@1224|Proteobacteria,2VHEJ@28216|Betaproteobacteria,4ACUJ@80864|Comamonadaceae 28216|Betaproteobacteria P Belongs to the ABC transporter superfamily - - 3.6.3.31 ko:K11072 ko02010,map02010 M00299 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.11.1 - - ABC_tran,TOBE_2 QTD1_k127_4289534_4 296591.Bpro_3888 2.339e-140 453.0 COG1176@1|root,COG1176@2|Bacteria,1MW9Y@1224|Proteobacteria,2VPU2@28216|Betaproteobacteria,4ACR7@80864|Comamonadaceae 28216|Betaproteobacteria P Binding-protein-dependent transport system inner membrane component - - - ko:K11071 ko02010,map02010 M00299 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11.1 - - BPD_transp_1 QTD1_k127_4289534_5 614083.AWQR01000039_gene1478 2.645e-128 421.0 COG1177@1|root,COG1177@2|Bacteria,1MWVC@1224|Proteobacteria,2VPQZ@28216|Betaproteobacteria,4AB7C@80864|Comamonadaceae 28216|Betaproteobacteria P Binding-protein-dependent transport system inner membrane component - - - ko:K11070 ko02010,map02010 M00299 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11.1 - - BPD_transp_1 QTD1_k127_4289534_3 1380394.JADL01000010_gene4299 8.216e-184 596.0 COG4948@1|root,COG4948@2|Bacteria,1NJ4H@1224|Proteobacteria,2U0F7@28211|Alphaproteobacteria 28211|Alphaproteobacteria M Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - - - - - - - - - - MR_MLE_C,MR_MLE_N QTD1_k127_4289534_6 395494.Galf_0422 1.076e-113 389.0 COG0457@1|root,COG0457@2|Bacteria,1MVMG@1224|Proteobacteria,2VP95@28216|Betaproteobacteria 28216|Betaproteobacteria S repeat-containing protein - - - - - - - - - - - - Sulfotransfer_3,TPR_1,TPR_10,TPR_16,TPR_2,TPR_6,TPR_8 QTD1_k127_4289534_1 1112214.AHIS01000095_gene709 6.712e-245 773.0 COG0457@1|root,COG0457@2|Bacteria,1MVMG@1224|Proteobacteria,2TSGE@28211|Alphaproteobacteria,2K04M@204457|Sphingomonadales 204457|Sphingomonadales S Sulfotransferase family - - - - - - - - - - - - Sulfotransfer_3,TPR_16,TPR_19,TPR_8 QTD1_k127_4289534_2 1112214.AHIS01000095_gene708 6.498e-222 719.0 COG1629@1|root,COG4771@2|Bacteria,1QV5Q@1224|Proteobacteria,2TWAA@28211|Alphaproteobacteria,2KEDH@204457|Sphingomonadales 204457|Sphingomonadales P TonB-dependent Receptor Plug Domain - - - - - - - - - - - - Plug,TonB_dep_Rec QTD1_k127_4289534_0 1112214.AHIS01000095_gene708 6.715e-277 880.0 COG1629@1|root,COG4771@2|Bacteria,1QV5Q@1224|Proteobacteria,2TWAA@28211|Alphaproteobacteria,2KEDH@204457|Sphingomonadales 204457|Sphingomonadales P TonB-dependent Receptor Plug Domain - - - - - - - - - - - - Plug,TonB_dep_Rec QTD1_k127_4289534_8 267608.RSc3163 2.04e-42 176.0 COG0457@1|root,COG0457@2|Bacteria,1MVMG@1224|Proteobacteria,2VP95@28216|Betaproteobacteria,1K3PP@119060|Burkholderiaceae 28216|Betaproteobacteria S Sulfotransferase family - - - - - - - - - - - - Sulfotransfer_3,TPR_1,TPR_16,TPR_2,TPR_6,TPR_8 QTD1_k127_4375135_2 1267534.KB906758_gene2256 1.437e-95 317.0 COG0745@1|root,COG0745@2|Bacteria,3Y522@57723|Acidobacteria,2JKQX@204432|Acidobacteriia 204432|Acidobacteriia KT Transcriptional regulatory protein, C terminal - - - ko:K07665 ko02020,map02020 M00452,M00745 - - ko00000,ko00001,ko00002,ko01504,ko02022 - - - Response_reg,Trans_reg_C QTD1_k127_4375135_1 1198114.AciX9_0522 1.218e-99 348.0 COG5002@1|root,COG5002@2|Bacteria,3Y5E9@57723|Acidobacteria,2JMCN@204432|Acidobacteriia 204432|Acidobacteriia T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - - - - - - - - - - HATPase_c,HisKA QTD1_k127_4375135_0 876269.ARWA01000001_gene1209 0.0 1175.0 COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria 28211|Alphaproteobacteria V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ACR_tran QTD1_k127_4417352_7 204669.Acid345_0178 1.613e-71 264.0 COG3115@1|root,COG3115@2|Bacteria,3Y6JB@57723|Acidobacteria,2JK9E@204432|Acidobacteriia 204432|Acidobacteriia D YXWGXW repeat (2 copies) - - - - - - - - - - - - YXWGXW QTD1_k127_4417352_2 926550.CLDAP_16780 2.011e-185 594.0 COG5598@1|root,COG5598@2|Bacteria 2|Bacteria H trimethylamine methyltransferase - - 2.1.1.250 ko:K14083 ko00680,ko01120,ko01200,map00680,map01120,map01200 M00563 R09124,R10016 RC00035,RC00732,RC01144,RC02984 ko00000,ko00001,ko00002,ko01000 - - - MTTB QTD1_k127_4417352_4 1095769.CAHF01000003_gene970 1.058e-129 430.0 COG0179@1|root,COG0179@2|Bacteria,1MUPF@1224|Proteobacteria,2VI5Z@28216|Betaproteobacteria,47269@75682|Oxalobacteraceae 28216|Betaproteobacteria Q 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase - - - - - - - - - - - - FAA_hydrolase QTD1_k127_4417352_0 322710.Avin_39720 7.111e-260 813.0 COG0518@1|root,COG0519@1|root,COG0518@2|Bacteria,COG0519@2|Bacteria,1MU2A@1224|Proteobacteria,1RP81@1236|Gammaproteobacteria 1236|Gammaproteobacteria F Catalyzes the synthesis of GMP from XMP guaA GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002 - - iJN746.PP_1032,iSF_1195.SF2553,iSFxv_1172.SFxv_2808,iS_1188.S2725,iYL1228.KPN_02833 GATase,GMP_synt_C,NAD_synthase QTD1_k127_4417352_1 187272.Mlg_1014 1.287e-219 690.0 COG0516@1|root,COG0517@1|root,COG0516@2|Bacteria,COG0517@2|Bacteria,1MUJM@1224|Proteobacteria,1RMT8@1236|Gammaproteobacteria,1WXCW@135613|Chromatiales 135613|Chromatiales F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth guaB - 1.1.1.205 ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 M00050 R01130,R08240 RC00143,RC02207 ko00000,ko00001,ko00002,ko01000,ko04147 - - - CBS,IMPDH QTD1_k127_4417352_3 396588.Tgr7_1034 1.46e-133 440.0 COG1570@1|root,COG1570@2|Bacteria,1MUA4@1224|Proteobacteria,1RNAZ@1236|Gammaproteobacteria,1WWPS@135613|Chromatiales 135613|Chromatiales L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides xseA - 3.1.11.6 ko:K03601 ko03430,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - Exonuc_VII_L,tRNA_anti_2 QTD1_k127_4417352_6 864051.BurJ1DRAFT_3792 5.727e-72 258.0 COG0739@1|root,COG0739@2|Bacteria,1MY2X@1224|Proteobacteria,2VI8F@28216|Betaproteobacteria,1KMW9@119065|unclassified Burkholderiales 28216|Betaproteobacteria M Peptidase family M23 - - - - - - - - - - - - Peptidase_M23 QTD1_k127_4417352_8 596154.Alide2_2920 7.915e-52 187.0 COG0590@1|root,COG0596@1|root,COG0590@2|Bacteria,COG0596@2|Bacteria,1RGU0@1224|Proteobacteria,2VR60@28216|Betaproteobacteria,4A9VR@80864|Comamonadaceae 28216|Betaproteobacteria FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) tadA - 3.5.4.33,3.8.1.5 ko:K01563,ko:K11991 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 - R05284,R05367,R05368,R05369,R05370,R07669,R07670,R10223 RC00477,RC01317,RC01340,RC01341,RC02013 ko00000,ko00001,ko01000,ko03016 - - - Abhydrolase_1,MafB19-deam,TfoX_C QTD1_k127_4417352_5 314278.NB231_00525 2.941e-72 251.0 COG4623@1|root,COG4623@2|Bacteria,1MWDS@1224|Proteobacteria,1RM8W@1236|Gammaproteobacteria,1WXYV@135613|Chromatiales 135613|Chromatiales M Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella mltF GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - ko:K18691 - - - - ko00000,ko01000,ko01011 - - - SBP_bac_3,SLT QTD1_k127_4454033_4 930169.B5T_00578 9.533e-10 63.0 COG5302@1|root,COG5302@2|Bacteria,1NIFA@1224|Proteobacteria,1SD2V@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid ccdA - - ko:K19164 - - - - ko00000,ko02048 - - - CcdA QTD1_k127_4454033_3 1439940.BAY1663_03119 2.397e-23 102.0 2DNNV@1|root,32YCB@2|Bacteria,1N7IN@1224|Proteobacteria,1S9V9@1236|Gammaproteobacteria 1236|Gammaproteobacteria S PFAM CcdB protein ccdB - - ko:K19163 - - - - ko00000,ko02048 - - - CcdB QTD1_k127_4454033_0 748247.AZKH_p0176 0.0 1374.0 COG0404@1|root,COG0665@1|root,COG0404@2|Bacteria,COG0665@2|Bacteria,1MUXJ@1224|Proteobacteria,2VMMA@28216|Betaproteobacteria 28216|Betaproteobacteria E Belongs to the GcvT family - - 1.5.3.19,1.5.8.4 ko:K00315,ko:K19191 ko00260,ko00760,ko01100,ko01120,map00260,map00760,map01100,map01120 - R01565,R10102 RC00060,RC00181,RC00557 ko00000,ko00001,ko01000 - - - DAO,FAO_M,GCV_T,GCV_T_C QTD1_k127_4454033_2 391165.GbCGDNIH1_0079 5.742e-36 145.0 COG4583@1|root,COG4583@2|Bacteria,1N27A@1224|Proteobacteria,2U77J@28211|Alphaproteobacteria,2JU5Y@204441|Rhodospirillales 204441|Rhodospirillales E Sarcosine oxidase, gamma subunit family - - 1.5.3.1 ko:K00305 ko00260,ko01100,map00260,map01100 - R00610 RC00060,RC00557 ko00000,ko00001,ko01000 - - - SoxG QTD1_k127_4454033_1 1125973.JNLC01000013_gene3914 1.956e-147 472.0 COG0404@1|root,COG0446@1|root,COG0404@2|Bacteria,COG0446@2|Bacteria,1MVEK@1224|Proteobacteria,2TTD7@28211|Alphaproteobacteria,3JTMR@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria E Glycine cleavage T-protein C-terminal barrel domain - - 1.5.3.1 ko:K00302 ko00260,ko01100,map00260,map01100 - R00610 RC00060,RC00557 ko00000,ko00001,ko01000 - - - FAD_oxidored,Fer2_4,GCV_T,GCV_T_C,Pyr_redox_2 QTD1_k127_4467561_0 666685.R2APBS1_1541 5.151e-140 451.0 COG0039@1|root,COG0039@2|Bacteria,1MV57@1224|Proteobacteria,1RMAX@1236|Gammaproteobacteria,1X3NI@135614|Xanthomonadales 135614|Xanthomonadales C Catalyzes the reversible oxidation of malate to oxaloacetate mdh GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006107,GO:0006108,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019362,GO:0019637,GO:0019674,GO:0019752,GO:0030060,GO:0034641,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046483,GO:0046496,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0072350,GO:0072524,GO:1901360,GO:1901564 1.1.1.37 ko:K00024 ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00012,M00168,M00173,M00346,M00374,M00620,M00740 R00342,R07136 RC00031 ko00000,ko00001,ko00002,ko01000 - - - Ldh_1_C,Ldh_1_N QTD1_k127_4467561_2 1267533.KB906736_gene961 5.22e-49 179.0 COG1725@1|root,COG1725@2|Bacteria,3Y5VN@57723|Acidobacteria,2JK5T@204432|Acidobacteriia 2|Bacteria K helix_turn_helix gluconate operon transcriptional repressor ytrA - - ko:K07979 - - - - ko00000,ko03000 - - - GntR QTD1_k127_4467561_1 1163408.UU9_11085 7.531e-110 364.0 COG1131@1|root,COG1131@2|Bacteria,1R3XF@1224|Proteobacteria,1S0MM@1236|Gammaproteobacteria,1X3B4@135614|Xanthomonadales 135614|Xanthomonadales V abc transporter atp-binding protein nodI - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran QTD1_k127_4467561_3 204669.Acid345_2984 5.948e-30 133.0 2E7DT@1|root,32XVH@2|Bacteria,3Y712@57723|Acidobacteria,2JMBI@204432|Acidobacteriia 204432|Acidobacteriia - - - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - - QTD1_k127_4472311_10 323261.Noc_0214 1.289e-06 52.0 292KW@1|root,2ZQ4T@2|Bacteria,1PAY1@1224|Proteobacteria,1SVTB@1236|Gammaproteobacteria 1236|Gammaproteobacteria S PilZ domain - - - - - - - - - - - - PilZ QTD1_k127_4472311_9 1122604.JONR01000008_gene2249 1.158e-21 98.0 2E69Z@1|root,330XW@2|Bacteria,1NC2S@1224|Proteobacteria,1SDZ1@1236|Gammaproteobacteria,1X7Z3@135614|Xanthomonadales 135614|Xanthomonadales P Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria - - - - - - - - - - - - HIPIP,TAT_signal QTD1_k127_4472311_8 1144275.COCOR_00143 1.593e-23 104.0 COG3795@1|root,COG3795@2|Bacteria,1NJ4J@1224|Proteobacteria 1224|Proteobacteria S YCII-related domain - - - - - - - - - - - - YCII QTD1_k127_4472311_3 240016.ABIZ01000001_gene4164 5.115e-86 299.0 COG4941@1|root,COG4941@2|Bacteria,46SEY@74201|Verrucomicrobia,2IV8H@203494|Verrucomicrobiae 203494|Verrucomicrobiae K Sigma-70 region 2 - - - - - - - - - - - - Sigma70_r2 QTD1_k127_4472311_2 460265.Mnod_3345 9.217e-93 315.0 COG0656@1|root,COG0656@2|Bacteria,1MUH2@1224|Proteobacteria,2TTC2@28211|Alphaproteobacteria,1JS2F@119045|Methylobacteriaceae 28211|Alphaproteobacteria S PFAM aldo keto reductase yeaE GO:0003674,GO:0003824,GO:0006081,GO:0008150,GO:0008152,GO:0009056,GO:0009438,GO:0009987,GO:0016491,GO:0042180,GO:0042182,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046185,GO:0051596,GO:0055114,GO:0071704,GO:1901575 - - - - - - - - - - Aldo_ket_red QTD1_k127_4472311_0 1198114.AciX9_2669 1.145e-317 1002.0 COG5549@1|root,COG5549@2|Bacteria,3Y2IY@57723|Acidobacteria,2JHP5@204432|Acidobacteriia 204432|Acidobacteriia O Domain of unknown function (DUF5117) - - - - - - - - - - - - DUF4953,DUF5117 QTD1_k127_4472311_5 395495.Lcho_4360 1.895e-46 169.0 COG0518@1|root,COG3795@1|root,COG0518@2|Bacteria,COG3795@2|Bacteria,1N2T1@1224|Proteobacteria,2VUKT@28216|Betaproteobacteria,1KMFD@119065|unclassified Burkholderiales 28216|Betaproteobacteria F YCII-related domain - - - - - - - - - - - - YCII QTD1_k127_4472311_1 1123073.KB899241_gene2634 4.018e-175 558.0 COG4941@1|root,COG4941@2|Bacteria,1MU3D@1224|Proteobacteria,1RN25@1236|Gammaproteobacteria,1X30Y@135614|Xanthomonadales 135614|Xanthomonadales K Belongs to the sigma-70 factor family. ECF subfamily - - - - - - - - - - - - Sigma70_r2,Sigma70_r4_2 QTD1_k127_4472311_7 1173020.Cha6605_1881 3.231e-43 163.0 COG2764@1|root,COG2764@2|Bacteria,1G76J@1117|Cyanobacteria 1117|Cyanobacteria S Glyoxalase bleomycin resistance protein dioxygenase - - - ko:K04750 - - - - ko00000 - - - 3-dmu-9_3-mt QTD1_k127_4472311_4 404589.Anae109_2831 3.495e-55 199.0 COG3795@1|root,COG3795@2|Bacteria,1RCZT@1224|Proteobacteria 1224|Proteobacteria S Protein conserved in bacteria - - - - - - - - - - - - YCII QTD1_k127_4472311_6 105559.Nwat_1040 2.472e-43 167.0 COG2345@1|root,COG2345@2|Bacteria,1RDXT@1224|Proteobacteria,1S4DW@1236|Gammaproteobacteria,1X1P9@135613|Chromatiales 135613|Chromatiales K IclR helix-turn-helix domain - - - - - - - - - - - - HTH_24 QTD1_k127_4478217_4 743721.Psesu_2309 1.646e-29 121.0 COG1495@1|root,COG1495@2|Bacteria,1RIJE@1224|Proteobacteria,1S6WD@1236|Gammaproteobacteria,1X6GW@135614|Xanthomonadales 135614|Xanthomonadales O Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein dsbB - - ko:K03611 - - - - ko00000,ko03110 5.A.2.1 - - DsbB QTD1_k127_4478217_2 1304275.C41B8_02197 1.887e-86 298.0 COG0704@1|root,COG0704@2|Bacteria,1MUMI@1224|Proteobacteria,1RMW5@1236|Gammaproteobacteria 1236|Gammaproteobacteria P Plays a role in the regulation of phosphate uptake phoU GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - ko:K02039 - - - - ko00000 - - - PhoU QTD1_k127_4478217_1 1248917.ANFX01000005_gene93 8.082e-106 355.0 COG0438@1|root,COG0438@2|Bacteria,1MUB7@1224|Proteobacteria,2TQQ0@28211|Alphaproteobacteria,2K08Y@204457|Sphingomonadales 204457|Sphingomonadales M glycosyl transferase group 1 - - - - - - - - - - - - Glyco_trans_1_4,Glyco_transf_4 QTD1_k127_4478217_3 614083.AWQR01000005_gene1019 3.85e-72 253.0 COG2908@1|root,COG2908@2|Bacteria,1MVKD@1224|Proteobacteria,2VHU3@28216|Betaproteobacteria,4ACS8@80864|Comamonadaceae 28216|Betaproteobacteria S Calcineurin-like phosphoesterase superfamily domain - - - - - - - - - - - - Metallophos,Metallophos_2 QTD1_k127_4478217_0 396588.Tgr7_2471 3.406e-118 394.0 COG5002@1|root,COG5002@2|Bacteria,1MWF3@1224|Proteobacteria,1RN0F@1236|Gammaproteobacteria,1WWCF@135613|Chromatiales 135613|Chromatiales T Histidine kinase - - 2.7.13.3 ko:K07636 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - DUF3329,HATPase_c,HisKA,PAS,PAS_8 QTD1_k127_4515647_5 545264.KB898746_gene751 0.0002547 45.0 COG2199@1|root,COG3221@1|root,COG2199@2|Bacteria,COG3221@2|Bacteria,1RGCV@1224|Proteobacteria,1T4CM@1236|Gammaproteobacteria,1X2R2@135613|Chromatiales 135613|Chromatiales T ABC transporter, phosphonate, periplasmic substrate-binding protein - - - - - - - - - - - - GGDEF,PAS,PAS_4,PAS_8,Phosphonate-bd QTD1_k127_4515647_4 1158756.AQXQ01000012_gene1432 2.726e-24 108.0 COG2005@1|root,COG2005@2|Bacteria,1P9SX@1224|Proteobacteria,1RMES@1236|Gammaproteobacteria 1236|Gammaproteobacteria H Transcriptional regulator modE - - ko:K02019 - - - - ko00000,ko03000 - - - HTH_1 QTD1_k127_4515647_3 1122604.JONR01000011_gene3707 7.879e-73 261.0 2ANMK@1|root,31DKW@2|Bacteria,1NV1X@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - QTD1_k127_4515647_0 876269.ARWA01000001_gene1211 2.128e-129 431.0 COG1538@1|root,COG1538@2|Bacteria,1MUA8@1224|Proteobacteria,2TSN8@28211|Alphaproteobacteria,3NC1V@45404|Beijerinckiaceae 28211|Alphaproteobacteria MU Outer membrane efflux protein oprN - - ko:K18300,ko:K19593 - M00641,M00769 - - ko00000,ko00002,ko01504,ko02000 1.B.17,2.A.6.2.34 - - OEP QTD1_k127_4515647_1 876269.ARWA01000001_gene1210 4.033e-119 399.0 COG0845@1|root,COG0845@2|Bacteria,1NQZ0@1224|Proteobacteria,2U105@28211|Alphaproteobacteria 28211|Alphaproteobacteria M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - HlyD_D23 QTD1_k127_4515647_2 876269.ARWA01000001_gene1209 1.105e-109 360.0 COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria 28211|Alphaproteobacteria V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ACR_tran QTD1_k127_4544346_0 396588.Tgr7_3031 1.589e-154 503.0 COG0232@1|root,COG0232@2|Bacteria,1MVQ2@1224|Proteobacteria,1RPVJ@1236|Gammaproteobacteria 1236|Gammaproteobacteria F dGTPase preferentially hydrolyzes dGTP over the other canonical NTPs dgt GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0015949,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 ko:K01129 ko00230,map00230 - R01856 RC00017 ko00000,ko00001,ko01000 - - - HD,HD_assoc QTD1_k127_4544346_1 765910.MARPU_16470 8.628e-129 425.0 COG0337@1|root,COG0337@2|Bacteria,1MUBK@1224|Proteobacteria,1RN4I@1236|Gammaproteobacteria,1WWZW@135613|Chromatiales 135613|Chromatiales E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) aroB - 4.2.3.4 ko:K01735 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R03083 RC00847 ko00000,ko00001,ko00002,ko01000 - - - DHQ_synthase QTD1_k127_4544346_5 243233.MCA0330 1.692e-49 182.0 COG0703@1|root,COG0703@2|Bacteria,1MUFJ@1224|Proteobacteria,1RPF6@1236|Gammaproteobacteria,1XEWS@135618|Methylococcales 135618|Methylococcales F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate aroK - 2.7.1.71 ko:K00891 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02412 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - SKI QTD1_k127_4544346_6 1038859.AXAU01000002_gene680 2.299e-49 184.0 COG1309@1|root,COG1309@2|Bacteria,1RGHA@1224|Proteobacteria,2TVPY@28211|Alphaproteobacteria,3JXKH@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria K Bacterial regulatory proteins, tetR family - - - - - - - - - - - - TetR_C_11,TetR_C_7,TetR_N QTD1_k127_4544346_3 1217718.ALOU01000020_gene2191 4.386e-70 262.0 COG1136@1|root,COG1136@2|Bacteria,1MU45@1224|Proteobacteria,2VQWS@28216|Betaproteobacteria,1KFBQ@119060|Burkholderiaceae 28216|Betaproteobacteria V ATPases associated with a variety of cellular activities - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran QTD1_k127_4544346_2 1120999.JONM01000004_gene3653 3.881e-110 374.0 COG4591@1|root,COG4591@2|Bacteria,1R4Q2@1224|Proteobacteria,2WBVE@28216|Betaproteobacteria,2KTDQ@206351|Neisseriales 206351|Neisseriales M FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX QTD1_k127_4544346_4 1120999.JONM01000004_gene3652 3.052e-67 256.0 COG2834@1|root,COG2834@2|Bacteria,1RE9C@1224|Proteobacteria,2WBP2@28216|Betaproteobacteria,2KTEM@206351|Neisseriales 206351|Neisseriales M Outer membrane lipoprotein-sorting protein - - - - - - - - - - - - LolA_like QTD1_k127_4544346_7 887062.HGR_14819 1.305e-45 187.0 28PF9@1|root,2ZC6H@2|Bacteria,1RB2X@1224|Proteobacteria,2VQRS@28216|Betaproteobacteria 28216|Betaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_4551182_0 1123256.KB907947_gene2649 1.937e-139 456.0 COG0477@1|root,COG2814@2|Bacteria,1MWKH@1224|Proteobacteria,1T5I8@1236|Gammaproteobacteria,1XC6T@135614|Xanthomonadales 135614|Xanthomonadales EGP Sugar (and other) transporter - - - - - - - - - - - - MFS_1 QTD1_k127_4551182_3 323261.Noc_2985 5.839e-39 154.0 2DKHM@1|root,309GY@2|Bacteria,1RFJ6@1224|Proteobacteria,1S4EG@1236|Gammaproteobacteria,1X1R5@135613|Chromatiales 135613|Chromatiales - - - - - - - - - - - - - - - QTD1_k127_4551182_4 472759.Nhal_0367 3.816e-34 143.0 2AI7D@1|root,33HQ0@2|Bacteria,1P2AB@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - QTD1_k127_4551182_1 765911.Thivi_0293 6.232e-57 205.0 COG0494@1|root,COG0494@2|Bacteria,1RCX7@1224|Proteobacteria,1RSM2@1236|Gammaproteobacteria,1WX5K@135613|Chromatiales 135613|Chromatiales L Belongs to the Nudix hydrolase family - - 3.6.1.13 ko:K01515 ko00230,map00230 - R01054 RC00002 ko00000,ko00001,ko01000 - - - NUDIX QTD1_k127_4551182_2 69279.BG36_09040 9.924e-56 201.0 COG0210@1|root,COG0210@2|Bacteria,1MU0G@1224|Proteobacteria,2TQSC@28211|Alphaproteobacteria,43HX2@69277|Phyllobacteriaceae 28211|Alphaproteobacteria L UvrD-like helicase C-terminal domain uvrD - 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - UvrD-helicase,UvrD_C QTD1_k127_4571735_0 555778.Hneap_2027 1.209e-215 684.0 COG0542@1|root,COG0542@2|Bacteria,1MURH@1224|Proteobacteria,1RN55@1236|Gammaproteobacteria,1WWC8@135613|Chromatiales 135613|Chromatiales O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE clpB - - ko:K03695 ko04213,map04213 - - - ko00000,ko00001,ko03110 - - - AAA,AAA_2,ClpB_D2-small,Clp_N QTD1_k127_4571735_1 395494.Galf_0422 1.957e-98 345.0 COG0457@1|root,COG0457@2|Bacteria,1MVMG@1224|Proteobacteria,2VP95@28216|Betaproteobacteria 28216|Betaproteobacteria S repeat-containing protein - - - - - - - - - - - - Sulfotransfer_3,TPR_1,TPR_10,TPR_16,TPR_2,TPR_6,TPR_8 QTD1_k127_4571735_2 323848.Nmul_A1978 1.795e-08 57.0 COG0428@1|root,COG0428@2|Bacteria,1R40E@1224|Proteobacteria,2VN69@28216|Betaproteobacteria,372KX@32003|Nitrosomonadales 28216|Betaproteobacteria P PFAM Zinc iron permease - - - ko:K16267 - - - - ko00000,ko02000 2.A.5.4.11 - - Zip QTD1_k127_4626917_4 392499.Swit_0945 7.963e-114 372.0 COG0665@1|root,COG0665@2|Bacteria,1MVM6@1224|Proteobacteria,2TRM7@28211|Alphaproteobacteria,2K1JV@204457|Sphingomonadales 204457|Sphingomonadales E sarcosine oxidase, beta subunit - - 1.5.3.1 ko:K00303 ko00260,ko01100,map00260,map01100 - R00610 RC00060,RC00557 ko00000,ko00001,ko01000 - - - DAO QTD1_k127_4626917_8 488538.SAR116_1055 1.314e-29 130.0 COG4311@1|root,COG4311@2|Bacteria,1MZC3@1224|Proteobacteria,2UC8C@28211|Alphaproteobacteria,4BQVD@82117|unclassified Alphaproteobacteria 28211|Alphaproteobacteria E Sarcosine oxidase, delta subunit soxD - 1.5.3.1 ko:K00304 ko00260,ko01100,map00260,map01100 - R00610 RC00060,RC00557 ko00000,ko00001,ko01000 - - - SoxD QTD1_k127_4626917_1 1411123.JQNH01000001_gene2317 2.149e-235 768.0 COG0404@1|root,COG0446@1|root,COG0404@2|Bacteria,COG0446@2|Bacteria,1MVEK@1224|Proteobacteria,2TTD7@28211|Alphaproteobacteria 28211|Alphaproteobacteria E Belongs to the GcvT family - - 1.5.3.1 ko:K00302 ko00260,ko01100,map00260,map01100 - R00610 RC00060,RC00557 ko00000,ko00001,ko01000 - - - FAD_oxidored,Fer2_4,GCV_T,GCV_T_C,Pyr_redox_2 QTD1_k127_4626917_9 492774.JQMB01000009_gene3239 5.365e-08 56.0 COG0583@1|root,COG0583@2|Bacteria,1RKAT@1224|Proteobacteria,2UB5R@28211|Alphaproteobacteria 28211|Alphaproteobacteria K LysR substrate binding domain - - - - - - - - - - - - HTH_1,LysR_substrate QTD1_k127_4626917_0 1380394.JADL01000010_gene4293 0.0 1180.0 COG0404@1|root,COG0665@1|root,COG0404@2|Bacteria,COG0665@2|Bacteria,1MUXJ@1224|Proteobacteria,2TRGS@28211|Alphaproteobacteria,2JR4V@204441|Rhodospirillales 204441|Rhodospirillales E FAD dependent oxidoreductase central domain - - - - - - - - - - - - DAO,FAO_M,GCV_T,GCV_T_C QTD1_k127_4626917_5 1458357.BG58_25605 2.545e-50 183.0 COG2030@1|root,COG2030@2|Bacteria,1RHPH@1224|Proteobacteria,2W1GH@28216|Betaproteobacteria,1K71F@119060|Burkholderiaceae 28216|Betaproteobacteria I MaoC like domain - - - - - - - - - - - - MaoC_dehydratas QTD1_k127_4626917_3 1112216.JH594425_gene2690 2.409e-120 399.0 COG3667@1|root,COG3667@2|Bacteria,1R6TA@1224|Proteobacteria,2U52R@28211|Alphaproteobacteria,2K3M1@204457|Sphingomonadales 204457|Sphingomonadales P copper resistance - - - - - - - - - - - - - QTD1_k127_4626917_10 314285.KT71_00880 0.000285 48.0 2EG3R@1|root,339VS@2|Bacteria,1NQDY@1224|Proteobacteria,1SI0X@1236|Gammaproteobacteria,1JANF@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_4626917_7 861299.J421_2095 1.061e-35 153.0 COG2972@1|root,COG2972@2|Bacteria,1ZUX6@142182|Gemmatimonadetes 2|Bacteria T Histidine kinase - - 2.7.13.3 ko:K08082 ko02020,map02020 M00493 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HATPase_c,His_kinase QTD1_k127_4626917_6 861299.J421_2096 6.685e-43 168.0 COG3279@1|root,COG3279@2|Bacteria,1ZTKG@142182|Gemmatimonadetes 2|Bacteria K LytTr DNA-binding domain - - - ko:K02477 - - - - ko00000,ko02022 - - - EAL,LytTR,Response_reg QTD1_k127_4626917_2 290397.Adeh_3989 5.244e-122 404.0 COG2271@1|root,COG2271@2|Bacteria,1MWYR@1224|Proteobacteria,42RD4@68525|delta/epsilon subdivisions,2WN11@28221|Deltaproteobacteria,2YU83@29|Myxococcales 28221|Deltaproteobacteria G Organic Anion Transporter Polypeptide (OATP) family - - - - - - - - - - - - MFS_1 QTD1_k127_465637_1 414684.RC1_0628 3.826e-205 648.0 COG0145@1|root,COG0146@1|root,COG0145@2|Bacteria,COG0146@2|Bacteria,1MU2Y@1224|Proteobacteria,2TQZ6@28211|Alphaproteobacteria,2JQPR@204441|Rhodospirillales 204441|Rhodospirillales EQ Hydantoinase/oxoprolinase N-terminal region - - 3.5.2.9 ko:K01469 ko00480,map00480 - R00251 RC00553 ko00000,ko00001,ko01000 - - - Hydant_A_N,Hydantoinase_A,Hydantoinase_B QTD1_k127_465637_3 247490.KSU1_C0255 1.11e-88 313.0 COG3497@1|root,COG3497@2|Bacteria,2IXRX@203682|Planctomycetes 203682|Planctomycetes S Phage tail sheath C-terminal domain - - - - - - - - - - - - Phage_sheath_1,Phage_sheath_1C QTD1_k127_465637_2 261292.Nit79A3_2954 3.446e-101 361.0 COG1376@1|root,COG1388@1|root,COG1376@2|Bacteria,COG1388@2|Bacteria,1MVYT@1224|Proteobacteria,2VMTY@28216|Betaproteobacteria,373X8@32003|Nitrosomonadales 28216|Betaproteobacteria M SMART Peptidoglycan-binding Lysin subgroup - - - ko:K16291 - - - - ko00000,ko01002,ko01011 - - - LysM,YkuD QTD1_k127_465637_8 1123261.AXDW01000009_gene102 7.124e-50 182.0 COG3762@1|root,COG3762@2|Bacteria,1R61N@1224|Proteobacteria,1S7ZP@1236|Gammaproteobacteria,1XC6M@135614|Xanthomonadales 135614|Xanthomonadales S TPM domain - - - - - - - - - - - - TPM_phosphatase QTD1_k127_465637_5 1122604.JONR01000054_gene4087 1.503e-76 268.0 COG1512@1|root,COG1512@2|Bacteria,1PB41@1224|Proteobacteria,1S38U@1236|Gammaproteobacteria,1XC3C@135614|Xanthomonadales 135614|Xanthomonadales S TPM domain - - - ko:K06872 - - - - ko00000 - - - TPM_phosphatase QTD1_k127_465637_4 316056.RPC_1333 2.469e-84 285.0 COG1704@1|root,COG1704@2|Bacteria,1MVH0@1224|Proteobacteria,2TRJR@28211|Alphaproteobacteria,3JTSH@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria S LemA family lemA - - ko:K03744 - - - - ko00000 - - - LemA QTD1_k127_465637_7 287.DR97_5082 1.279e-60 214.0 COG0782@1|root,COG0782@2|Bacteria,1RAP0@1224|Proteobacteria,1S40Q@1236|Gammaproteobacteria,1YETC@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length greB - - ko:K04760 - - - - ko00000,ko03021 - - - GreA_GreB,GreA_GreB_N QTD1_k127_465637_0 414684.RC1_1718 1.991e-235 736.0 COG5310@1|root,COG5310@2|Bacteria,1MUZB@1224|Proteobacteria,2TRTR@28211|Alphaproteobacteria,2JR46@204441|Rhodospirillales 204441|Rhodospirillales Q Homospermidine synthase hss - 2.5.1.44 ko:K00808 ko00960,ko01110,map00960,map01110 - R00018 RC00053 ko00000,ko00001,ko01000 - - - Sacchrp_dh_C,Sacchrp_dh_NADP QTD1_k127_465637_6 1254432.SCE1572_32740 6.088e-62 225.0 COG0625@1|root,COG3631@1|root,COG0625@2|Bacteria,COG3631@2|Bacteria,1N3UG@1224|Proteobacteria 1224|Proteobacteria O Glutathione S-transferase, N-terminal domain - - 2.5.1.18 ko:K00799 ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418 - R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905 RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944 ko00000,ko00001,ko01000,ko02000 1.A.12.2.2,1.A.12.3.2 - - GST_C,GST_C_2,GST_N_3 QTD1_k127_465637_9 748247.AZKH_1203 6.489e-49 180.0 COG2897@1|root,COG2897@2|Bacteria,1MW4B@1224|Proteobacteria,2VHAX@28216|Betaproteobacteria,2KVPB@206389|Rhodocyclales 206389|Rhodocyclales P Rhodanese Homology Domain tst - 2.8.1.1,2.8.1.2 ko:K01011 ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122 - R01931,R03105,R03106 RC00214 ko00000,ko00001,ko01000 - - - Rhodanese QTD1_k127_4658235_0 314278.NB231_10393 3.311e-202 639.0 COG2766@1|root,COG2766@2|Bacteria,1MVW7@1224|Proteobacteria,1RNFJ@1236|Gammaproteobacteria,1WWXB@135613|Chromatiales 135613|Chromatiales T PFAM PrkA AAA - - - ko:K07180 - - - - ko00000 - - - AAA_PrkA,PrkA QTD1_k127_4658235_2 1118235.CAJH01000046_gene2900 1.997e-12 81.0 COG0810@1|root,COG0810@2|Bacteria,1NH16@1224|Proteobacteria,1S2FT@1236|Gammaproteobacteria,1X522@135614|Xanthomonadales 135614|Xanthomonadales M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - ko:K03832 - - - - ko00000,ko02000 2.C.1.1 - - TonB_C QTD1_k127_4658235_1 296591.Bpro_3270 1.277e-33 145.0 COG0643@1|root,COG2198@1|root,COG0643@2|Bacteria,COG2198@2|Bacteria,1MUAG@1224|Proteobacteria,2VJSZ@28216|Betaproteobacteria,4AIA8@80864|Comamonadaceae 28216|Betaproteobacteria T Histidine Phosphotransfer domain - - 2.7.13.3 ko:K03407 ko02020,ko02030,map02020,map02030 M00506 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035 - - - 4HB_MCP_1,HAMP,HATPase_c,Hpt,PilJ QTD1_k127_4672807_11 1267535.KB906767_gene5295 5.137e-68 246.0 COG3391@1|root,COG3391@2|Bacteria,3Y48Y@57723|Acidobacteria,2JJ87@204432|Acidobacteriia 204432|Acidobacteriia S YVTN family beta-propeller repeat - - - - - - - - - - - - - QTD1_k127_4672807_6 314278.NB231_03782 9.65e-132 436.0 COG1007@1|root,COG1007@2|Bacteria,1MV56@1224|Proteobacteria,1RPJB@1236|Gammaproteobacteria,1WW6G@135613|Chromatiales 135613|Chromatiales C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoN - 1.6.5.3 ko:K00343 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Proton_antipo_M QTD1_k127_4672807_10 314278.NB231_03787 4.163e-74 251.0 COG1008@1|root,COG1008@2|Bacteria,1MV7V@1224|Proteobacteria,1RNI4@1236|Gammaproteobacteria,1WXM2@135613|Chromatiales 135613|Chromatiales C TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M - - 1.6.5.3 ko:K00342 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q5_N,Proton_antipo_M QTD1_k127_4672807_4 768671.ThimaDRAFT_0041 1.203e-140 454.0 COG1008@1|root,COG1008@2|Bacteria,1MV7V@1224|Proteobacteria,1RNI4@1236|Gammaproteobacteria,1WXM2@135613|Chromatiales 135613|Chromatiales C TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M - - 1.6.5.3 ko:K00342 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q5_N,Proton_antipo_M QTD1_k127_4672807_0 396588.Tgr7_0997 1.179e-268 842.0 COG1009@1|root,COG1009@2|Bacteria,1MW2M@1224|Proteobacteria,1RNKN@1236|Gammaproteobacteria,1WWQ6@135613|Chromatiales 135613|Chromatiales CP NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein - - 1.6.5.3 ko:K00341 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Proton_antipo_M,Proton_antipo_N QTD1_k127_4672807_14 765913.ThidrDRAFT_4120 3.856e-35 146.0 COG0713@1|root,COG0713@2|Bacteria,1RH0S@1224|Proteobacteria,1S6FN@1236|Gammaproteobacteria,1WYHG@135613|Chromatiales 135613|Chromatiales C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoK - 1.6.5.3 ko:K00340 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q2 QTD1_k127_4672807_13 1288494.EBAPG3_21500 2.745e-56 203.0 COG0839@1|root,COG0839@2|Bacteria,1MWJV@1224|Proteobacteria,2VJ4G@28216|Betaproteobacteria,371X0@32003|Nitrosomonadales 28216|Betaproteobacteria C Belongs to the complex I subunit 6 family nuoJ - 1.6.5.3 ko:K00339 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q3 QTD1_k127_4672807_9 1260251.SPISAL_03135 2.32e-74 252.0 COG1143@1|root,COG1143@2|Bacteria,1MV90@1224|Proteobacteria,1RN32@1236|Gammaproteobacteria,1WWN9@135613|Chromatiales 135613|Chromatiales C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoI - 1.6.5.3 ko:K00338 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Fer4 QTD1_k127_4672807_5 1335757.SPICUR_03250 9.595e-134 434.0 COG1005@1|root,COG1005@2|Bacteria,1MU2R@1224|Proteobacteria,1RQE9@1236|Gammaproteobacteria,1WXDH@135613|Chromatiales 135613|Chromatiales C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone nuoH - 1.6.5.3 ko:K00337 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - NADHdh QTD1_k127_4672807_1 396588.Tgr7_0992 1.577e-250 793.0 COG1034@1|root,COG1034@2|Bacteria,1P8MN@1224|Proteobacteria,1RMUH@1236|Gammaproteobacteria,1WWAH@135613|Chromatiales 135613|Chromatiales C TIGRFAM NADH-quinone oxidoreductase, chain G - - 1.6.5.3 ko:K00336 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Fer2_4,Molybdopterin,Molydop_binding,NADH-G_4Fe-4S_3 QTD1_k127_4672807_3 396588.Tgr7_0991 8.181e-195 616.0 COG1894@1|root,COG1894@2|Bacteria,1MV8F@1224|Proteobacteria,1RMUD@1236|Gammaproteobacteria,1WWH3@135613|Chromatiales 135613|Chromatiales C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain nuoF - 1.6.5.3 ko:K00335 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Complex1_51K,NADH_4Fe-4S,SLBB QTD1_k127_4672807_12 555778.Hneap_1960 4.921e-67 240.0 COG1905@1|root,COG1905@2|Bacteria,1MWS2@1224|Proteobacteria,1RN4C@1236|Gammaproteobacteria,1WWTG@135613|Chromatiales 135613|Chromatiales C TIGRFAM NADH-quinone oxidoreductase, E subunit - - 1.6.5.3 ko:K00334 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - 2Fe-2S_thioredx QTD1_k127_4672807_2 472759.Nhal_3697 2.153e-240 746.0 COG0649@1|root,COG0649@2|Bacteria,1MVIN@1224|Proteobacteria,1RM98@1236|Gammaproteobacteria,1WWN5@135613|Chromatiales 135613|Chromatiales C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoD - 1.6.5.3 ko:K00333 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Complex1_49kDa QTD1_k127_4672807_8 519989.ECTPHS_07047 1.08e-77 267.0 COG0852@1|root,COG0852@2|Bacteria,1MX4B@1224|Proteobacteria,1S2ET@1236|Gammaproteobacteria,1WWDD@135613|Chromatiales 135613|Chromatiales C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoC - 1.6.5.3 ko:K00332 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Complex1_30kDa QTD1_k127_4672807_7 159450.NH14_30165 7.232e-99 323.0 COG0377@1|root,COG0377@2|Bacteria,1MUI2@1224|Proteobacteria,2VIWK@28216|Betaproteobacteria,1K10B@119060|Burkholderiaceae 28216|Betaproteobacteria C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoB - 1.6.5.3 ko:K00331 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q6 QTD1_k127_4682064_12 1286093.C266_22415 8.35e-09 61.0 COG0789@1|root,COG3315@1|root,COG0789@2|Bacteria,COG3315@2|Bacteria,1REBR@1224|Proteobacteria,2VX04@28216|Betaproteobacteria,1KHHZ@119060|Burkholderiaceae 28216|Betaproteobacteria KQ Belongs to the UPF0677 family - - - - - - - - - - - - LCM,MerR_1 QTD1_k127_4682064_9 550540.Fbal_3122 5.598e-38 157.0 28MJ4@1|root,2ZAVQ@2|Bacteria,1R62K@1224|Proteobacteria,1RNQC@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - VP2126 - - - - - - - - - - - - QTD1_k127_4682064_2 1218076.BAYB01000018_gene3527 3.483e-185 593.0 COG0154@1|root,COG0154@2|Bacteria,1MW3Z@1224|Proteobacteria,2VJWK@28216|Betaproteobacteria,1K07J@119060|Burkholderiaceae 28216|Betaproteobacteria J Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia - - 3.5.1.4 ko:K01426 ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120 - R02540,R03096,R03180,R03909,R05551,R05590 RC00010,RC00100,RC00950,RC01025 ko00000,ko00001,ko01000 - - - Amidase QTD1_k127_4682064_0 204669.Acid345_2854 2.162e-268 848.0 COG0154@1|root,COG0154@2|Bacteria,3Y2N6@57723|Acidobacteria,2JIY4@204432|Acidobacteriia 204432|Acidobacteriia J Amidase - - - - - - - - - - - - Amidase QTD1_k127_4682064_1 114615.BRADO1466 5.276e-255 799.0 COG3158@1|root,COG3158@2|Bacteria,1MUVH@1224|Proteobacteria,2TRVJ@28211|Alphaproteobacteria,3JTDY@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria P Transport of potassium into the cell trkD - - ko:K03549 - - - - ko00000,ko02000 2.A.72 - - K_trans QTD1_k127_4682064_10 1123257.AUFV01000007_gene74 2.291e-28 121.0 2C08V@1|root,3306E@2|Bacteria,1NMWV@1224|Proteobacteria,1SSCU@1236|Gammaproteobacteria,1XB0Q@135614|Xanthomonadales 135614|Xanthomonadales S Evidence 4 Homologs of previously reported genes of - - - - - - - - - - - - - QTD1_k127_4682064_5 1123393.KB891317_gene2207 1.021e-91 310.0 COG0668@1|root,COG0668@2|Bacteria,1N596@1224|Proteobacteria,2VQ9J@28216|Betaproteobacteria,1KSDQ@119069|Hydrogenophilales 119069|Hydrogenophilales M Conserved TM helix - - - - - - - - - - - - MS_channel,TM_helix QTD1_k127_4682064_6 1112212.JH584235_gene1999 6.296e-86 303.0 COG4989@1|root,COG4989@2|Bacteria,1MY3G@1224|Proteobacteria,2U0C4@28211|Alphaproteobacteria,2K2TQ@204457|Sphingomonadales 204457|Sphingomonadales S Aldo/keto reductase family - - - - - - - - - - - - Aldo_ket_red QTD1_k127_4682064_4 190650.CC_3209 9.605e-99 335.0 COG0303@1|root,COG0303@2|Bacteria,1MVD5@1224|Proteobacteria,2TQRI@28211|Alphaproteobacteria,2KFZN@204458|Caulobacterales 204458|Caulobacterales H TIGRFAM molybdenum cofactor synthesis domain - - 2.10.1.1 ko:K03750 ko00790,ko01100,map00790,map01100 - R09735 RC03462 ko00000,ko00001,ko01000 - - - MoCF_biosynth,MoeA_C,MoeA_N QTD1_k127_4682064_7 582402.Hbal_1822 4.587e-71 244.0 COG0521@1|root,COG0521@2|Bacteria,1R9W2@1224|Proteobacteria,2TTA8@28211|Alphaproteobacteria,43XI7@69657|Hyphomonadaceae 28211|Alphaproteobacteria H May be involved in the biosynthesis of molybdopterin moaB GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0042802,GO:0044424,GO:0044444,GO:0044464 2.7.7.75 ko:K03638 ko00790,ko01100,map00790,map01100 - R09726 RC00002 ko00000,ko00001,ko01000 - - - MoCF_biosynth QTD1_k127_4682064_11 266265.Bxe_B2264 5.498e-10 63.0 2EN08@1|root,33FNF@2|Bacteria,1NN71@1224|Proteobacteria,2VXVQ@28216|Betaproteobacteria,1K97P@119060|Burkholderiaceae 28216|Betaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_4682064_3 264198.Reut_B4657 4.067e-130 422.0 COG0583@1|root,COG0583@2|Bacteria,1MWVU@1224|Proteobacteria,2VJJH@28216|Betaproteobacteria,1JZPR@119060|Burkholderiaceae 28216|Betaproteobacteria K Transcriptional regulator - - - ko:K21703 - - - - ko00000,ko03000 - - - HTH_1,LysR_substrate QTD1_k127_4682064_8 159450.NH14_14435 1.228e-64 223.0 COG1802@1|root,COG1802@2|Bacteria,1MXNF@1224|Proteobacteria,2VKBY@28216|Betaproteobacteria,1K4DZ@119060|Burkholderiaceae 28216|Betaproteobacteria K Transcriptional regulator - - - - - - - - - - - - FCD,GntR QTD1_k127_4697082_3 113395.AXAI01000002_gene5161 3.079e-189 596.0 COG2987@1|root,COG2987@2|Bacteria,1MU4W@1224|Proteobacteria,2TSJR@28211|Alphaproteobacteria,3JRYI@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate hutU - 4.2.1.49 ko:K01712 ko00340,ko01100,map00340,map01100 M00045 R02914 RC00804 ko00000,ko00001,ko00002,ko01000 - - - Urocanase,Urocanase_C,Urocanase_N QTD1_k127_4697082_5 1415779.JOMH01000001_gene3182 3.745e-35 146.0 COG0779@1|root,COG0779@2|Bacteria,1RDP2@1224|Proteobacteria,1S3Y7@1236|Gammaproteobacteria,1X5YX@135614|Xanthomonadales 135614|Xanthomonadales S Required for maturation of 30S ribosomal subunits rimP GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - ko:K09748 - - - - ko00000,ko03009 - - - DUF150,DUF150_C QTD1_k127_4697082_1 396588.Tgr7_1002 1.003e-219 691.0 COG0195@1|root,COG0195@2|Bacteria,1MWT7@1224|Proteobacteria,1RNQS@1236|Gammaproteobacteria,1WVXP@135613|Chromatiales 135613|Chromatiales K Participates in both transcription termination and antitermination nusA - - ko:K02600 - - - - ko00000,ko03009,ko03021 - - - HHH_5,KH_5,NusA_N,S1 QTD1_k127_4697082_0 1195246.AGRI_15210 2.139e-272 862.0 COG0532@1|root,COG0532@2|Bacteria,1MV26@1224|Proteobacteria,1RM9X@1236|Gammaproteobacteria,46433@72275|Alteromonadaceae 1236|Gammaproteobacteria J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex infB GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034645,GO:0036094,GO:0043021,GO:0043024,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - ko:K02519 - - - - ko00000,ko03012,ko03029 - - - GTP_EFTU,GTP_EFTU_D2,IF-2,IF2_N,IF2_assoc QTD1_k127_4697082_7 545276.KB898724_gene1877 5.248e-26 113.0 COG0858@1|root,COG0858@2|Bacteria,1MZPE@1224|Proteobacteria,1S9AF@1236|Gammaproteobacteria,1WYHM@135613|Chromatiales 135613|Chromatiales J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA rbfA - - ko:K02834 - - - - ko00000,ko03009 - - - RBFA QTD1_k127_4697082_4 870187.Thini_1431 8.559e-81 282.0 COG0130@1|root,COG0130@2|Bacteria,1MV0N@1224|Proteobacteria,1RMKP@1236|Gammaproteobacteria,460E5@72273|Thiotrichales 72273|Thiotrichales J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs truB - 5.4.99.25 ko:K03177 - - - - ko00000,ko01000,ko03016 - - - TruB-C_2,TruB_C_2,TruB_N QTD1_k127_4697082_6 396588.Tgr7_1006 1.836e-30 122.0 COG0184@1|root,COG0184@2|Bacteria,1MZ2W@1224|Proteobacteria,1S8U6@1236|Gammaproteobacteria,1WYZR@135613|Chromatiales 135613|Chromatiales J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome rpsO - - ko:K02956 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S15 QTD1_k127_4697082_2 519989.ECTPHS_07267 5.98e-193 611.0 COG1185@1|root,COG1185@2|Bacteria,1MVB9@1224|Proteobacteria,1RNBF@1236|Gammaproteobacteria,1WW27@135613|Chromatiales 135613|Chromatiales J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction pnp - 2.7.7.8 ko:K00962 ko00230,ko00240,ko03018,map00230,map00240,map03018 M00394 R00437,R00438,R00439,R00440 RC02795 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 - - - KH_1,PNPase,RNase_PH,RNase_PH_C,S1 QTD1_k127_469899_4 1429851.X548_09720 2.997e-22 101.0 COG1765@1|root,COG1765@2|Bacteria,1N2BT@1224|Proteobacteria,1SA3V@1236|Gammaproteobacteria,1X7VF@135614|Xanthomonadales 135614|Xanthomonadales O OsmC-like protein - - - ko:K07397 - - - - ko00000 - - - OsmC QTD1_k127_469899_3 1112216.JH594425_gene1776 1.958e-23 106.0 COG5430@1|root,COG5430@2|Bacteria,1N5AX@1224|Proteobacteria,2UD10@28211|Alphaproteobacteria,2K70Q@204457|Sphingomonadales 204457|Sphingomonadales S Spore Coat Protein U domain - - - - - - - - - - - - SCPU QTD1_k127_469899_5 452662.SJA_C1-07070 1.089e-21 101.0 COG5430@1|root,COG5430@2|Bacteria,1N5AX@1224|Proteobacteria,2UD10@28211|Alphaproteobacteria,2K70Q@204457|Sphingomonadales 204457|Sphingomonadales S Spore Coat Protein U domain - - - - - - - - - - - - SCPU QTD1_k127_469899_0 342113.DM82_2224 3.72e-126 432.0 COG3188@1|root,COG3188@2|Bacteria,1MWV6@1224|Proteobacteria,2VIR3@28216|Betaproteobacteria,1K5T7@119060|Burkholderiaceae 28216|Betaproteobacteria NU Outer membrane usher protein - - - ko:K07347 ko05133,map05133 - - - ko00000,ko00001,ko02000,ko02035,ko02044 1.B.11.3 - - PapC_C,Usher QTD1_k127_469899_2 748247.AZKH_3952 1.912e-35 143.0 COG3121@1|root,COG3121@2|Bacteria,1R4RJ@1224|Proteobacteria,2VXCK@28216|Betaproteobacteria 28216|Betaproteobacteria M assembly chaperone papD - - ko:K07346 - - - - ko00000,ko02035,ko02044,ko03110 - - - PapD_N QTD1_k127_4701218_2 1123487.KB892841_gene4258 5.537e-48 181.0 28JIP@1|root,2Z82C@2|Bacteria,1R5N9@1224|Proteobacteria,2VRZW@28216|Betaproteobacteria,2KWSG@206389|Rhodocyclales 206389|Rhodocyclales S S1/P1 Nuclease - - - - - - - - - - - - S1-P1_nuclease QTD1_k127_4701218_0 713586.KB900536_gene2819 2.062e-146 476.0 COG2230@1|root,COG2230@2|Bacteria,1MX3U@1224|Proteobacteria,1S1KY@1236|Gammaproteobacteria,1X28H@135613|Chromatiales 135613|Chromatiales M Mycolic acid cyclopropane synthetase - - 2.1.1.79 ko:K00574 - - - - ko00000,ko01000 - - - CMAS QTD1_k127_4701218_1 1469245.JFBG01000023_gene1276 4.388e-119 391.0 COG0644@1|root,COG0644@2|Bacteria,1MXQY@1224|Proteobacteria,1SEJ8@1236|Gammaproteobacteria 1236|Gammaproteobacteria C geranylgeranyl reductase - - - - - - - - - - - - FAD_binding_3 QTD1_k127_4716991_4 1123073.KB899241_gene2672 8.504e-88 292.0 COG0538@1|root,COG0538@2|Bacteria,1MW3J@1224|Proteobacteria,1RNMD@1236|Gammaproteobacteria,1X3IR@135614|Xanthomonadales 135614|Xanthomonadales C Isocitrate/isopropylmalate dehydrogenase - - 1.1.1.42 ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 M00009,M00010,M00173,M00740 R00267,R00268,R01899 RC00001,RC00084,RC00114,RC00626,RC02801 br01601,ko00000,ko00001,ko00002,ko01000 - - - CBS,Iso_dh QTD1_k127_4716991_8 379066.GAU_0037 5.997e-37 148.0 COG4430@1|root,COG4430@2|Bacteria 2|Bacteria F Bacteriocin-protection, YdeI or OmpD-Associated - - - - - - - - - - - - DUF3052,OmdA QTD1_k127_4716991_6 1487953.JMKF01000028_gene1367 3.057e-68 245.0 COG1051@1|root,COG1051@2|Bacteria,1G4H7@1117|Cyanobacteria,1HEY6@1150|Oscillatoriales 1117|Cyanobacteria F Hydrolase of X-linked nucleoside diphosphate N terminal - - - - - - - - - - - - NUDIX,Nudix_N QTD1_k127_4716991_1 1128421.JAGA01000001_gene2203 2.884e-161 529.0 COG4579@1|root,COG4579@2|Bacteria 2|Bacteria F [isocitrate dehydrogenase (NADP+)] phosphatase activity aceK GO:0000166,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004721,GO:0004722,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008772,GO:0009060,GO:0009987,GO:0015980,GO:0016208,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0016999,GO:0017076,GO:0017144,GO:0018105,GO:0018193,GO:0018209,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0035639,GO:0036094,GO:0036211,GO:0042578,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044267,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046487,GO:0050790,GO:0055114,GO:0065007,GO:0065009,GO:0070262,GO:0071704,GO:0072350,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.11.5 ko:K00906 - - - - ko00000,ko01000 - - - AceK QTD1_k127_4716991_14 1182590.BN5_03083 9.942e-05 49.0 2EKQ7@1|root,33EDZ@2|Bacteria,1QF1F@1224|Proteobacteria,1TC2N@1236|Gammaproteobacteria,1YJQ6@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria S Protein of unknown function (DUF2845) - - - - - - - - - - - - DUF2845 QTD1_k127_4716991_12 543913.D521_0806 3.244e-07 56.0 COG0438@1|root,COG0438@2|Bacteria,1MUB7@1224|Proteobacteria,2VJ5X@28216|Betaproteobacteria,1KR1S@119066|unclassified Betaproteobacteria 28216|Betaproteobacteria M Glycosyltransferase Family 4 gtrA - - - - - - - - - - - Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1 QTD1_k127_4716991_13 15368.BRADI1G52530.1 3.844e-06 56.0 KOG1037@1|root,KOG1037@2759|Eukaryota,37KUG@33090|Viridiplantae,3G71C@35493|Streptophyta,3KQHX@4447|Liliopsida,3I9QV@38820|Poales 35493|Streptophyta KLO Poly (ADP-ribose) polymerase PARP1 GO:0001101,GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0003950,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006464,GO:0006471,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009719,GO:0009725,GO:0009737,GO:0009987,GO:0010033,GO:0016070,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016886,GO:0019538,GO:0022616,GO:0033554,GO:0033993,GO:0034641,GO:0034645,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0097305,GO:0140097,GO:1901360,GO:1901564,GO:1901576,GO:1901700 2.4.2.30 ko:K10798 ko03410,ko04210,ko04212,ko04214,ko04217,map03410,map04210,map04212,map04214,map04217 M00296 - - ko00000,ko00001,ko00002,ko01000,ko03032,ko03036,ko03400 - - - BRCT,PADR1,PARP,PARP_reg,WGR,zf-PARP QTD1_k127_4716991_10 1502851.FG93_00530 2.101e-20 93.0 2EHXX@1|root,33BPE@2|Bacteria,1N90E@1224|Proteobacteria,2UFK2@28211|Alphaproteobacteria,3K14U@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_4716991_2 543728.Vapar_6317 4.208e-121 398.0 COG4312@1|root,COG4312@2|Bacteria,1NAXN@1224|Proteobacteria,2VK34@28216|Betaproteobacteria,4AG99@80864|Comamonadaceae 28216|Betaproteobacteria S Bacterial protein of unknown function (DUF899) - - - - - - - - - - - - DUF899 QTD1_k127_4716991_5 1299327.I546_3206 2.489e-85 291.0 COG1028@1|root,COG1028@2|Bacteria,2I3EJ@201174|Actinobacteria,237YX@1762|Mycobacteriaceae 201174|Actinobacteria IQ NAD dependent epimerase/dehydratase family - - - - - - - - - - - - adh_short QTD1_k127_4716991_9 754035.Mesau_03072 3.917e-30 126.0 COG3224@1|root,COG3224@2|Bacteria,1NJGZ@1224|Proteobacteria,2UHQU@28211|Alphaproteobacteria 28211|Alphaproteobacteria S EthD domain - - - - - - - - - - - - EthD QTD1_k127_4716991_0 1380394.JADL01000009_gene3303 3.323e-168 537.0 COG0745@1|root,COG0745@2|Bacteria,1MX29@1224|Proteobacteria,2TV8G@28211|Alphaproteobacteria,2JPZF@204441|Rhodospirillales 204441|Rhodospirillales KT RESPONSE REGULATOR receiver - - - - - - - - - - - - - QTD1_k127_4716991_3 266265.Bxe_B0542 2.458e-110 359.0 COG3391@1|root,COG3391@2|Bacteria,1N25Z@1224|Proteobacteria,2VMGE@28216|Betaproteobacteria,1K4GK@119060|Burkholderiaceae 28216|Betaproteobacteria S amine dehydrogenase activity - - - - - - - - - - - - PQQ_2 QTD1_k127_4716991_7 1123368.AUIS01000033_gene1381 5.405e-49 188.0 COG0605@1|root,COG0605@2|Bacteria,1MVW2@1224|Proteobacteria,1RP7X@1236|Gammaproteobacteria 1236|Gammaproteobacteria C Destroys radicals which are normally produced within the cells and which are toxic to biological systems sodB - 1.15.1.1 ko:K04564 ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016 - - - ko00000,ko00001,ko01000 - - - Sod_Fe_C,Sod_Fe_N QTD1_k127_4716991_11 272568.GDI0225 2.814e-18 85.0 COG3071@1|root,COG3071@2|Bacteria,1N6Y8@1224|Proteobacteria,2UFTD@28211|Alphaproteobacteria 28211|Alphaproteobacteria H Protein of unknown function (DUF2905) - - - - - - - - - - - - DUF2905 QTD1_k127_4729298_0 396588.Tgr7_0517 1.905e-238 749.0 COG0064@1|root,COG0064@2|Bacteria,1MUKG@1224|Proteobacteria,1RP7U@1236|Gammaproteobacteria,1WX4J@135613|Chromatiales 135613|Chromatiales J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) gatB - 6.3.5.6,6.3.5.7 ko:K02434 ko00970,ko01100,map00970,map01100 - R03905,R04212 RC00010 ko00000,ko00001,ko01000,ko03029 - - - GatB_N,GatB_Yqey QTD1_k127_4729298_1 472759.Nhal_0566 1.591e-214 675.0 COG0154@1|root,COG0154@2|Bacteria,1MUVQ@1224|Proteobacteria,1RP7E@1236|Gammaproteobacteria,1WWC9@135613|Chromatiales 135613|Chromatiales J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) gatA - 6.3.5.6,6.3.5.7 ko:K02433 ko00970,ko01100,map00970,map01100 - R03905,R04212 RC00010 ko00000,ko00001,ko01000,ko03029 - - - Amidase QTD1_k127_4729298_3 1123401.JHYQ01000025_gene3327 2.65e-21 97.0 COG0721@1|root,COG0721@2|Bacteria,1MZQP@1224|Proteobacteria,1S8VY@1236|Gammaproteobacteria,4618D@72273|Thiotrichales 72273|Thiotrichales H Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) gatC - 6.3.5.6,6.3.5.7 ko:K02435 ko00970,ko01100,map00970,map01100 - R03905,R04212 RC00010 ko00000,ko00001,ko01000,ko03029 - - - Glu-tRNAGln QTD1_k127_4729298_2 243233.MCA0100 1.493e-163 519.0 COG1077@1|root,COG1077@2|Bacteria,1MUMW@1224|Proteobacteria,1RN82@1236|Gammaproteobacteria,1XESQ@135618|Methylococcales 135618|Methylococcales D TIGRFAM Cell shape determining protein MreB Mrl mreB - - ko:K03569 - - - - ko00000,ko02048,ko03036,ko04812 1.A.33.1,9.B.157.1 - - MreB_Mbl QTD1_k127_4732869_2 402881.Plav_0507 1.674e-45 168.0 COG5309@1|root,COG5309@2|Bacteria 2|Bacteria G chondroitin AC lyase activity - - - - - - - - - - - - - QTD1_k127_4732869_4 749414.SBI_09105 2.202e-13 76.0 COG0517@1|root,COG0517@2|Bacteria,2GKSH@201174|Actinobacteria 201174|Actinobacteria C Cbs domain - - - - - - - - - - - - BON,CBS QTD1_k127_4732869_1 1123257.AUFV01000003_gene1081 1.371e-174 585.0 COG2982@1|root,COG2982@2|Bacteria,1MUME@1224|Proteobacteria,1RNPC@1236|Gammaproteobacteria,1X4JW@135614|Xanthomonadales 135614|Xanthomonadales M Domain of Unknown Function (DUF748) - - - - - - - - - - - - DUF748 QTD1_k127_4732869_0 1449049.JONW01000005_gene1013 1.372e-218 708.0 COG1629@1|root,COG1629@2|Bacteria,1QUTW@1224|Proteobacteria,2TW7F@28211|Alphaproteobacteria,2KFR5@204458|Caulobacterales 204458|Caulobacterales P receptor - - - - - - - - - - - - Plug,TonB_dep_Rec QTD1_k127_4732869_3 1158292.JPOE01000002_gene3595 1.214e-26 114.0 2ATZM@1|root,31JJE@2|Bacteria,1RIFX@1224|Proteobacteria,2VSS3@28216|Betaproteobacteria,1KM95@119065|unclassified Burkholderiales 28216|Betaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_4732869_5 648757.Rvan_3220 2.314e-08 57.0 COG2135@1|root,COG2135@2|Bacteria,1RER4@1224|Proteobacteria,2U0W2@28211|Alphaproteobacteria,3N6WV@45401|Hyphomicrobiaceae 28211|Alphaproteobacteria S Belongs to the SOS response-associated peptidase family - - - - - - - - - - - - SRAP QTD1_k127_4734548_7 381666.H16_B1667 2.836e-21 93.0 COG0304@1|root,COG0304@2|Bacteria,1N91E@1224|Proteobacteria,2VJR3@28216|Betaproteobacteria,1K3W4@119060|Burkholderiaceae 28216|Betaproteobacteria IQ Belongs to the beta-ketoacyl-ACP synthases family fabB - 2.3.1.179,2.3.1.41 ko:K00647,ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119 RC00039,RC02728,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Ketoacyl-synt_C,ketoacyl-synt QTD1_k127_4734548_1 269482.Bcep1808_2872 1.049e-89 305.0 COG0304@1|root,COG0304@2|Bacteria,1NP8M@1224|Proteobacteria,2VJDN@28216|Betaproteobacteria,1K4FF@119060|Burkholderiaceae 28216|Betaproteobacteria IQ Beta-ketoacyl synthase, N-terminal domain - - - - - - - - - - - - Ketoacyl-synt_2 QTD1_k127_4734548_2 859657.RPSI07_2946 6.745e-46 171.0 COG4706@1|root,COG4706@2|Bacteria,1RIH4@1224|Proteobacteria,2VT0K@28216|Betaproteobacteria,1K7TQ@119060|Burkholderiaceae 28216|Betaproteobacteria I dehydratase - - - - - - - - - - - - - QTD1_k127_4734548_0 1123255.JHYS01000010_gene405 3.089e-95 319.0 COG1028@1|root,COG1028@2|Bacteria,1MUPY@1224|Proteobacteria,2VK19@28216|Betaproteobacteria,4AACV@80864|Comamonadaceae 28216|Betaproteobacteria IQ KR domain fabG2 - 1.1.1.100 ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short,adh_short_C2 QTD1_k127_4734548_4 1292034.OR37_02430 7.04e-24 111.0 2919Q@1|root,32EZ8@2|Bacteria,1R3DK@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - QTD1_k127_4734548_6 401053.AciPR4_2460 1.731e-21 102.0 COG4319@1|root,COG4319@2|Bacteria,3Y5FP@57723|Acidobacteria,2JN7M@204432|Acidobacteriia 204432|Acidobacteriia S SnoaL-like domain - - - - - - - - - - - - DUF4440 QTD1_k127_4734548_3 1379701.JPJC01000189_gene1592 2.977e-26 117.0 2919Q@1|root,32EZ8@2|Bacteria,1R3DK@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - QTD1_k127_4734548_5 234267.Acid_7849 4.642e-23 102.0 COG4122@1|root,COG4122@2|Bacteria,3Y33U@57723|Acidobacteria 57723|Acidobacteria S O-methyltransferase activity - - - - - - - - - - - - - QTD1_k127_4752678_8 1452718.JBOY01000008_gene3425 4.613e-72 247.0 COG0559@1|root,COG0559@2|Bacteria,1MY1E@1224|Proteobacteria,1SYK4@1236|Gammaproteobacteria 1236|Gammaproteobacteria E Belongs to the binding-protein-dependent transport system permease family - - - ko:K01997 ko02010,ko02024,map02010,map02024 M00237 - - ko00000,ko00001,ko00002,ko02000 3.A.1.4 - - BPD_transp_2 QTD1_k127_4752678_2 114615.BRADO2139 5.074e-170 546.0 COG0683@1|root,COG0683@2|Bacteria,1MUCB@1224|Proteobacteria,2TU8H@28211|Alphaproteobacteria,3JTKW@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria E Receptor family ligand binding region - - - ko:K01999 ko02010,ko02024,map02010,map02024 M00237 - - ko00000,ko00001,ko00002,ko02000 3.A.1.4 - - Peripla_BP_6 QTD1_k127_4752678_6 365046.Rta_10070 3.818e-106 348.0 COG0410@1|root,COG0410@2|Bacteria,1MUR3@1224|Proteobacteria,2VJA0@28216|Betaproteobacteria,4ABV2@80864|Comamonadaceae 28216|Betaproteobacteria E PFAM ABC transporter related - - - ko:K01996 ko02010,ko02024,map02010,map02024 M00237 - - ko00000,ko00001,ko00002,ko02000 3.A.1.4 - - ABC_tran QTD1_k127_4752678_4 338969.Rfer_1075 3.213e-119 388.0 COG0411@1|root,COG0411@2|Bacteria,1MX51@1224|Proteobacteria,2VJN5@28216|Betaproteobacteria,4AACW@80864|Comamonadaceae 28216|Betaproteobacteria E PFAM ABC transporter related drrA - - ko:K01995 ko02010,ko02024,map02010,map02024 M00237 - - ko00000,ko00001,ko00002,ko02000 3.A.1.4 - - ABC_tran,BCA_ABC_TP_C QTD1_k127_4752678_16 1336233.JAEH01000012_gene3647 4.922e-19 94.0 COG3695@1|root,COG3695@2|Bacteria,1N7J2@1224|Proteobacteria,1SCIZ@1236|Gammaproteobacteria,2QCE4@267890|Shewanellaceae 1236|Gammaproteobacteria L PFAM Methylated-DNA- protein -cysteine S-methyltransferase ybaZ GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0005488,GO:0005515,GO:0019899,GO:0097159,GO:1901363 - ko:K07443 - - - - ko00000 - - - DNA_binding_1 QTD1_k127_4752678_20 1225785.CM001983_gene500 3.667e-05 53.0 COG2823@1|root,COG2823@2|Bacteria,1PCIJ@1224|Proteobacteria,1RRGP@1236|Gammaproteobacteria,2JCRW@204037|Dickeya 1236|Gammaproteobacteria S SMART Transport-associated and nodulation region osmY GO:0005575,GO:0005623,GO:0006457,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0009628,GO:0009987,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0050896,GO:0061077 - ko:K04065 - - - - ko00000 - - - BON QTD1_k127_4752678_13 485913.Krac_2611 1.026e-27 120.0 2BHPS@1|root,32BT1@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - QTD1_k127_4752678_12 1121904.ARBP01000026_gene629 5.979e-38 147.0 COG3832@1|root,COG3832@2|Bacteria,4NRDQ@976|Bacteroidetes,47VV2@768503|Cytophagia 976|Bacteroidetes S Activator of Hsp90 ATPase homolog 1-like protein - - - - - - - - - - - - AHSA1 QTD1_k127_4752678_7 358220.C380_13245 3.955e-73 265.0 2A20V@1|root,30QAU@2|Bacteria,1RDQH@1224|Proteobacteria,2VQZV@28216|Betaproteobacteria,4ADSI@80864|Comamonadaceae 28216|Betaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_4752678_11 358220.C380_13250 2.167e-53 193.0 COG1595@1|root,COG1595@2|Bacteria,1N38X@1224|Proteobacteria,2VU1J@28216|Betaproteobacteria,4AFBS@80864|Comamonadaceae 28216|Betaproteobacteria K TIGRFAM RNA polymerase sigma factor, sigma-70 family - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4,Sigma70_r4_2 QTD1_k127_4752678_21 5691.AAZ12226 0.0004518 52.0 COG0406@1|root,KOG0498@1|root,KOG0234@2759|Eukaryota,KOG0498@2759|Eukaryota,3XSTW@5653|Kinetoplastida 5653|Kinetoplastida GT 6-phosphofructo-2-kinase fructose-2 - - - - - - - - - - - - 6PF2K,Ank_2,Ank_4,Ank_5,His_Phos_1 QTD1_k127_4752678_10 292564.Cyagr_3035 4.28e-64 230.0 COG1073@1|root,COG1073@2|Bacteria,1G2EP@1117|Cyanobacteria,22TK6@167375|Cyanobium 1117|Cyanobacteria S Serine aminopeptidase, S33 - - - ko:K06889 - - - - ko00000 - - - Hydrolase_4,Peptidase_S9 QTD1_k127_4752678_5 1282876.BAOK01000001_gene2399 2.246e-113 377.0 COG1064@1|root,COG1064@2|Bacteria,1MUTT@1224|Proteobacteria,2TTMV@28211|Alphaproteobacteria,4BQWG@82117|unclassified Alphaproteobacteria 28211|Alphaproteobacteria S Zinc-binding dehydrogenase MA20_28180 - 1.1.1.1 ko:K00001,ko:K13953 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 - R00623,R00754,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310 RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273 ko00000,ko00001,ko01000 - - - ADH_N,ADH_zinc_N QTD1_k127_4752678_17 663610.JQKO01000003_gene1474 6.902e-18 90.0 COG0204@1|root,COG0204@2|Bacteria,1QU3F@1224|Proteobacteria,2U1AI@28211|Alphaproteobacteria 28211|Alphaproteobacteria I Acyltransferase - - - - - - - - - - - - Acyltransferase QTD1_k127_4752678_0 1197906.CAJQ02000023_gene2456 1.289e-176 562.0 COG0491@1|root,COG0607@1|root,COG0491@2|Bacteria,COG0607@2|Bacteria,1MURA@1224|Proteobacteria,2TR1F@28211|Alphaproteobacteria,3JUUY@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria P Rhodanese Homology Domain MA20_22850 - - - - - - - - - - - Lactamase_B,Rhodanese QTD1_k127_4752678_3 420324.KI911965_gene544 8.58e-126 405.0 COG0450@1|root,COG0450@2|Bacteria,1MX2B@1224|Proteobacteria,2TT09@28211|Alphaproteobacteria,1JUHK@119045|Methylobacteriaceae 28211|Alphaproteobacteria O C-terminal domain of 1-Cys peroxiredoxin MA20_35715 - 1.11.1.15 ko:K03386 ko04214,map04214 - - - ko00000,ko00001,ko01000,ko04147 - - - 1-cysPrx_C,AhpC-TSA QTD1_k127_4752678_18 1565129.JSFF01000002_gene3546 4.039e-06 55.0 2E9KN@1|root,333TE@2|Bacteria,1NCTP@1224|Proteobacteria,1SFMQ@1236|Gammaproteobacteria,2QCVA@267890|Shewanellaceae 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_4752678_19 497964.CfE428DRAFT_5121 9.263e-06 48.0 COG0454@1|root,COG0456@2|Bacteria,46V3S@74201|Verrucomicrobia 74201|Verrucomicrobia K acetyltransferase - - - - - - - - - - - - - QTD1_k127_4752678_1 1248916.ANFY01000003_gene999 8.556e-171 558.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,1MWGR@1224|Proteobacteria,2TRTE@28211|Alphaproteobacteria,2K0PD@204457|Sphingomonadales 204457|Sphingomonadales EU Prolyl oligopeptidase family - - - - - - - - - - - - PD40,Peptidase_S9 QTD1_k127_4752678_14 318996.AXAZ01000099_gene2418 1.072e-22 102.0 COG3788@1|root,COG3788@2|Bacteria,1NBHH@1224|Proteobacteria,2UA0K@28211|Alphaproteobacteria,3JYVE@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria S MAPEG family - - 2.5.1.18 ko:K00799 ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418 - R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905 RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944 ko00000,ko00001,ko01000,ko02000 1.A.12.2.2,1.A.12.3.2 - - MAPEG QTD1_k127_4752678_9 1121935.AQXX01000142_gene2325 3.638e-67 234.0 28I6Z@1|root,2Z89U@2|Bacteria,1R8YM@1224|Proteobacteria,1S0GG@1236|Gammaproteobacteria,1XNAN@135619|Oceanospirillales 135619|Oceanospirillales S von Willebrand factor (vWF) type A domain - - - - - - - - - - - - - QTD1_k127_4760040_2 1415779.JOMH01000001_gene1701 1.248e-30 123.0 COG0403@1|root,COG0403@2|Bacteria,1MVC1@1224|Proteobacteria,1RPGZ@1236|Gammaproteobacteria,1X3XE@135614|Xanthomonadales 135614|Xanthomonadales E Glycine cleavage system P-protein - - 1.4.4.2 ko:K00282 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 - R01221,R03425 RC00022,RC00929,RC02834,RC02880 ko00000,ko00001,ko01000 - - - GDC-P QTD1_k127_4760040_0 1122604.JONR01000002_gene1670 6.409e-236 743.0 COG1003@1|root,COG1003@2|Bacteria,1MUDP@1224|Proteobacteria,1RND3@1236|Gammaproteobacteria,1X35C@135614|Xanthomonadales 135614|Xanthomonadales E The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor gcvP - 1.4.4.2 ko:K00281,ko:K00283 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 M00532 R01221,R03425 RC00022,RC00929,RC02834,RC02880 ko00000,ko00001,ko00002,ko01000 - - - GDC-P QTD1_k127_4760040_3 1158165.KB898872_gene963 3.46e-29 126.0 COG0818@1|root,COG0818@2|Bacteria,1MZ3Q@1224|Proteobacteria,1S92I@1236|Gammaproteobacteria,1WYCK@135613|Chromatiales 135613|Chromatiales M Recycling of diacylglycerol produced during the turnover of membrane phospholipid - - 2.7.1.107 ko:K00901 ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00561,map00564,map01100,map01110,map04070,map04072,map05231 - R02240 RC00002,RC00017 ko00000,ko00001,ko01000 - - - DAGK_prokar QTD1_k127_4760040_1 4792.ETI40205 3.764e-184 597.0 COG0265@1|root,KOG1421@2759|Eukaryota,3QEFQ@4776|Peronosporales 4776|Peronosporales O PDZ-like domain - - - - - - - - - - - - PDZ_1,PDZ_2,Trypsin_2 QTD1_k127_4760175_2 1163409.UUA_11693 5.173e-192 608.0 COG0031@1|root,COG0517@1|root,COG0031@2|Bacteria,COG0517@2|Bacteria,1MUBE@1224|Proteobacteria,1RN6J@1236|Gammaproteobacteria,1X4GC@135614|Xanthomonadales 135614|Xanthomonadales E Cystathionine beta-synthase cysB - 4.2.1.22 ko:K01697 ko00260,ko00270,ko01100,ko01130,ko01230,map00260,map00270,map01100,map01130,map01230 M00035,M00338 R00891,R01290,R04942 RC00056,RC00069,RC00256,RC00489,RC01246 ko00000,ko00001,ko00002,ko01000 - - - CBS,PALP QTD1_k127_4760175_10 864051.BurJ1DRAFT_1880 4.82e-47 182.0 COG0346@1|root,COG0346@2|Bacteria,1N0VU@1224|Proteobacteria,2VTS3@28216|Betaproteobacteria,1KP7R@119065|unclassified Burkholderiales 28216|Betaproteobacteria E Glyoxalase-like domain - - 4.4.1.5 ko:K01759 ko00620,map00620 - R02530 RC00004,RC00740 ko00000,ko00001,ko01000 - - - Glyoxalase QTD1_k127_4760175_3 1207063.P24_08254 1.51e-180 571.0 COG0626@1|root,COG0626@2|Bacteria,1MU57@1224|Proteobacteria,2TW14@28211|Alphaproteobacteria,2JPIA@204441|Rhodospirillales 204441|Rhodospirillales E COG0626 Cystathionine beta-lyases cystathionine gamma-synthases - - 4.4.1.1 ko:K01758 ko00260,ko00270,ko00450,ko01100,ko01130,ko01230,map00260,map00270,map00450,map01100,map01130,map01230 M00338 R00782,R01001,R02408,R04770,R04930,R09366 RC00056,RC00069,RC00348,RC00382,RC00710,RC01209,RC01210,RC01245,RC02303 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Cys_Met_Meta_PP QTD1_k127_4760175_8 1123073.KB899241_gene3086 1.759e-86 307.0 COG1082@1|root,COG1082@2|Bacteria,1RAC3@1224|Proteobacteria,1RS39@1236|Gammaproteobacteria,1X6BI@135614|Xanthomonadales 135614|Xanthomonadales G xylose isomerase - - - - - - - - - - - - AP_endonuc_2 QTD1_k127_4760175_1 1123073.KB899241_gene2164 2.009e-195 618.0 COG2355@1|root,COG2355@2|Bacteria,1MWEW@1224|Proteobacteria,1RQGU@1236|Gammaproteobacteria,1X5U5@135614|Xanthomonadales 135614|Xanthomonadales E Membrane dipeptidase (Peptidase family M19) - - 3.4.13.19 ko:K01273 - - - - ko00000,ko00537,ko01000,ko01002,ko04147 - - - Peptidase_M19 QTD1_k127_4760175_9 84531.JMTZ01000016_gene1113 5.626e-72 250.0 COG1396@1|root,COG1396@2|Bacteria,1R6PS@1224|Proteobacteria,1T24B@1236|Gammaproteobacteria,1X5S2@135614|Xanthomonadales 135614|Xanthomonadales K Cro/C1-type HTH DNA-binding domain - - - - - - - - - - - - Cupin_2,HTH_31 QTD1_k127_4760175_5 1144305.PMI02_02324 8.118e-150 502.0 COG1629@1|root,COG4771@2|Bacteria,1MVFB@1224|Proteobacteria,2U2KS@28211|Alphaproteobacteria,2KDKA@204457|Sphingomonadales 204457|Sphingomonadales P TonB-dependent receptor plug - - - - - - - - - - - - Plug,TonB_dep_Rec QTD1_k127_4760175_4 1123073.KB899241_gene2158 9.496e-153 491.0 COG3367@1|root,COG3367@2|Bacteria,1MVEX@1224|Proteobacteria,1RNVG@1236|Gammaproteobacteria,1X547@135614|Xanthomonadales 135614|Xanthomonadales S Domain of unknown function (DUF1611_N) Rossmann-like domain - - - - - - - - - - - - DUF1611,DUF1611_N QTD1_k127_4760175_0 1123073.KB899241_gene2159 2.37e-219 700.0 COG1680@1|root,COG1680@2|Bacteria,1PQ2Z@1224|Proteobacteria,1SYR1@1236|Gammaproteobacteria,1XCSI@135614|Xanthomonadales 135614|Xanthomonadales V Beta-lactamase - - - - - - - - - - - - Beta-lactamase QTD1_k127_4760175_6 1123073.KB899241_gene2160 2.296e-140 467.0 COG4948@1|root,COG4948@2|Bacteria,1MW76@1224|Proteobacteria,1RMKS@1236|Gammaproteobacteria,1XCGI@135614|Xanthomonadales 135614|Xanthomonadales M Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - - - - - - - - - - MR_MLE_C,MR_MLE_N QTD1_k127_4760175_7 1123073.KB899241_gene2162 2.557e-120 401.0 COG3949@1|root,COG3949@2|Bacteria,1QAYU@1224|Proteobacteria,1T7ME@1236|Gammaproteobacteria,1X9FE@135614|Xanthomonadales 135614|Xanthomonadales S Membrane - - - - - - - - - - - - - QTD1_k127_4760175_11 290397.Adeh_1258 6.024e-21 96.0 COG0285@1|root,COG0285@2|Bacteria,1MVCH@1224|Proteobacteria,42N08@68525|delta/epsilon subdivisions,2WIW9@28221|Deltaproteobacteria,2YUTG@29|Myxococcales 28221|Deltaproteobacteria H Belongs to the folylpolyglutamate synthase family folC - 6.3.2.12,6.3.2.17 ko:K11754 ko00790,ko01100,map00790,map01100 M00126,M00841 R00942,R02237,R04241 RC00064,RC00090,RC00162 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_2475 Mur_ligase_C,Mur_ligase_M QTD1_k127_4762488_14 572477.Alvin_0548 7.161e-75 258.0 COG0688@1|root,COG0688@2|Bacteria,1MVT4@1224|Proteobacteria,1RN1U@1236|Gammaproteobacteria,1WWNF@135613|Chromatiales 135613|Chromatiales I Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Prokaryotic type I sub-subfamily psd - 4.1.1.65 ko:K01613 ko00564,ko01100,ko01110,map00564,map01100,map01110 M00093 R02055 RC00299 ko00000,ko00001,ko00002,ko01000 - - - PS_Dcarbxylase QTD1_k127_4762488_5 314278.NB231_00895 5.35e-96 331.0 COG2269@1|root,COG2269@2|Bacteria,1MU97@1224|Proteobacteria,1RMR9@1236|Gammaproteobacteria,1WW5X@135613|Chromatiales 135613|Chromatiales J Elongation factor P--(R)-beta-lysine ligase - - - ko:K04568 - - - - ko00000,ko01000,ko03012 - - - tRNA-synt_2 QTD1_k127_4762488_9 1122603.ATVI01000006_gene434 6.416e-89 303.0 COG2962@1|root,COG2962@2|Bacteria,1MX5G@1224|Proteobacteria,1RMAC@1236|Gammaproteobacteria,1X3PF@135614|Xanthomonadales 135614|Xanthomonadales S EamA-like transporter family - - - - - - - - - - - - EamA QTD1_k127_4762488_7 314278.NB231_00890 1.399e-91 306.0 COG0231@1|root,COG0231@2|Bacteria,1MW2J@1224|Proteobacteria,1RPW7@1236|Gammaproteobacteria,1WX8C@135613|Chromatiales 135613|Chromatiales J Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation efp - - ko:K02356 - - - - ko00000,ko03012 - - - EFP,EFP_N,Elong-fact-P_C QTD1_k127_4762488_10 105559.Nwat_2727 3.721e-87 314.0 COG0784@1|root,COG2199@1|root,COG2200@1|root,COG0784@2|Bacteria,COG2199@2|Bacteria,COG2200@2|Bacteria,1PJCA@1224|Proteobacteria,1RS4H@1236|Gammaproteobacteria,1WWNV@135613|Chromatiales 135613|Chromatiales T PFAM EAL domain - - - ko:K21025 ko02025,map02025 - - - ko00000,ko00001 - - - EAL,GGDEF,PAS,PAS_8,PAS_9,Response_reg QTD1_k127_4762488_0 1226994.AMZB01000124_gene2973 3.09e-310 967.0 COG0188@1|root,COG0188@2|Bacteria,1MURI@1224|Proteobacteria,1RMTC@1236|Gammaproteobacteria,1YEVJ@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule parC GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006276,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008150,GO:0008152,GO:0009330,GO:0009987,GO:0016020,GO:0016043,GO:0019897,GO:0019898,GO:0022402,GO:0030541,GO:0032991,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0098813,GO:1901360,GO:1901363 - ko:K02621 - - - - ko00000,ko01000,ko02048,ko03032,ko03036 - - - DNA_gyraseA_C,DNA_topoisoIV QTD1_k127_4762488_1 396588.Tgr7_2123 6.571e-296 918.0 COG0187@1|root,COG0187@2|Bacteria,1MVH1@1224|Proteobacteria,1RMCI@1236|Gammaproteobacteria,1WXIB@135613|Chromatiales 135613|Chromatiales L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule parE - - ko:K02622 - - - - ko00000,ko01000,ko02048,ko03032,ko03036 - - - DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim QTD1_k127_4762488_15 713586.KB900536_gene2900 1.611e-65 239.0 COG0247@1|root,COG0247@2|Bacteria,1RF02@1224|Proteobacteria,1S302@1236|Gammaproteobacteria,1WX78@135613|Chromatiales 135613|Chromatiales C Protein of unknown function (DUF3501) - - - - - - - - - - - - DUF3501 QTD1_k127_4762488_3 713586.KB900536_gene2898 1.683e-193 613.0 COG0247@1|root,COG0247@2|Bacteria,1MWTK@1224|Proteobacteria,1RQ9M@1236|Gammaproteobacteria,1WX1I@135613|Chromatiales 135613|Chromatiales C Cysteine-rich domain - - - - - - - - - - - - CCG QTD1_k127_4762488_13 550540.Fbal_1759 2.806e-76 256.0 COG1592@1|root,COG1592@2|Bacteria,1R9WG@1224|Proteobacteria,1S25G@1236|Gammaproteobacteria 1236|Gammaproteobacteria C PFAM Rubrerythrin - - - - - - - - - - - - Rubrerythrin QTD1_k127_4762488_8 1124983.PFLCHA0_c54620 1.152e-90 310.0 COG0142@1|root,COG0142@2|Bacteria,1MWNG@1224|Proteobacteria,1RMKY@1236|Gammaproteobacteria,1YM5C@136843|Pseudomonas fluorescens group 1236|Gammaproteobacteria H Belongs to the FPP GGPP synthase family ispA GO:0003674,GO:0003824,GO:0004161,GO:0004337,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016114,GO:0016740,GO:0016765,GO:0019637,GO:0033383,GO:0033384,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0045337,GO:0045338,GO:0071704,GO:0090407,GO:1901576 2.5.1.1,2.5.1.10,2.5.1.29 ko:K00795,ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00364,M00366 R01658,R02003,R02061 RC00279 ko00000,ko00001,ko00002,ko01000,ko01006 - - iPC815.YPO3176,iSFV_1184.SFV_0386 polyprenyl_synt QTD1_k127_4762488_2 105559.Nwat_1373 8.707e-282 878.0 COG1154@1|root,COG1154@2|Bacteria,1MUSJ@1224|Proteobacteria,1RNQD@1236|Gammaproteobacteria,1WWHQ@135613|Chromatiales 135613|Chromatiales H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) dxs - 2.2.1.7 ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 M00096 R05636 RC00032 ko00000,ko00001,ko00002,ko01000 - - - DXP_synthase_N,Transket_pyr,Transketolase_C QTD1_k127_4762488_4 522306.CAP2UW1_4106 6.713e-117 388.0 COG1469@1|root,COG1469@2|Bacteria,1MV1B@1224|Proteobacteria,2VIC9@28216|Betaproteobacteria,1KQDP@119066|unclassified Betaproteobacteria 28216|Betaproteobacteria S Converts GTP to 7,8-dihydroneopterin triphosphate folE2 - 3.5.4.16 ko:K09007 ko00790,ko01100,map00790,map01100 M00126 R00428,R04639,R05046,R05048 RC00263,RC00294,RC00323,RC00945,RC01188 ko00000,ko00001,ko00002,ko01000 - - - GCHY-1 QTD1_k127_4762488_12 570967.JMLV01000001_gene2584 2.224e-79 282.0 COG0642@1|root,COG0642@2|Bacteria,1QTVA@1224|Proteobacteria,2U5EI@28211|Alphaproteobacteria,2JYZA@204441|Rhodospirillales 204441|Rhodospirillales T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - - - - - - - - - - HAMP,HATPase_c,HisKA QTD1_k127_4762488_6 1244869.H261_06676 2.809e-94 313.0 COG0745@1|root,COG0745@2|Bacteria,1MU67@1224|Proteobacteria,2TRTZ@28211|Alphaproteobacteria,2JQ2Y@204441|Rhodospirillales 204441|Rhodospirillales T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - ko:K02483 - - - - ko00000,ko02022 - - - Response_reg,Trans_reg_C QTD1_k127_4762488_11 1122604.JONR01000006_gene2745 1.042e-83 289.0 COG0515@1|root,COG0515@2|Bacteria,1MV1P@1224|Proteobacteria,1S1T4@1236|Gammaproteobacteria,1XCD5@135614|Xanthomonadales 135614|Xanthomonadales KLT Cyclic nucleotide-monophosphate binding domain - - - - - - - - - - - - Pkinase,cNMP_binding QTD1_k127_4783369_2 1206739.BAGJ01000089_gene1001 3.4e-15 89.0 COG2199@1|root,COG2199@2|Bacteria,2IJ6M@201174|Actinobacteria,4FXMF@85025|Nocardiaceae 201174|Actinobacteria T Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - - - - - - - - - - GAF,GGDEF,PAS,PAS_4 QTD1_k127_4783369_0 1238182.C882_1843 2.106e-172 551.0 COG0160@1|root,COG0160@2|Bacteria,1MWY6@1224|Proteobacteria,2TUDG@28211|Alphaproteobacteria,2JQQB@204441|Rhodospirillales 204441|Rhodospirillales E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - 2.6.1.19,2.6.1.22 ko:K07250 ko00250,ko00280,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00280,map00410,map00640,map00650,map01100,map01120 M00027 R00908,R01648,R04188 RC00006,RC00062,RC00160 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_3 QTD1_k127_4785589_0 322710.Avin_39660 0.0 1553.0 COG0046@1|root,COG0047@1|root,COG0046@2|Bacteria,COG0047@2|Bacteria,1MYN4@1224|Proteobacteria,1RMRN@1236|Gammaproteobacteria 1236|Gammaproteobacteria F Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate purL GO:0000166,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006520,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016884,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.5.3 ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04463 RC00010,RC01160 ko00000,ko00001,ko00002,ko01000 - - iECH74115_1262.ECH74115_3792,iECO111_1330.ECO111_3283,iECSP_1301.ECSP_3501,iECs_1301.ECs3423,iG2583_1286.G2583_3088,iJN746.PP_1037,ic_1306.c3080 AIRS_C,GATase_5 QTD1_k127_4785589_1 314278.NB231_12576 3.47e-41 158.0 COG4517@1|root,COG4517@2|Bacteria,1MZJX@1224|Proteobacteria,1S95D@1236|Gammaproteobacteria,1WZ3B@135613|Chromatiales 135613|Chromatiales S Domain of unknown function (DUF1820) - - - - - - - - - - - - DUF1820 QTD1_k127_4785589_3 399739.Pmen_2320 1.799e-31 139.0 COG1716@1|root,COG3456@1|root,COG1716@2|Bacteria,COG3456@2|Bacteria,1R3R7@1224|Proteobacteria,1S0GX@1236|Gammaproteobacteria,1YKU4@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria T Type VI secretion fha1 - - ko:K07169,ko:K11894,ko:K11913 ko02025,ko03070,map02025,map03070 - - - ko00000,ko00001,ko02044 3.A.23.1 - - FHA QTD1_k127_4785589_2 314278.NB231_00525 5.571e-41 164.0 COG4623@1|root,COG4623@2|Bacteria,1MWDS@1224|Proteobacteria,1RM8W@1236|Gammaproteobacteria,1WXYV@135613|Chromatiales 135613|Chromatiales M Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella mltF GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - ko:K18691 - - - - ko00000,ko01000,ko01011 - - - SBP_bac_3,SLT QTD1_k127_4798126_3 1144275.COCOR_02148 4.47e-82 286.0 COG1228@1|root,COG1228@2|Bacteria,1MVAF@1224|Proteobacteria,42MKS@68525|delta/epsilon subdivisions,2WKIH@28221|Deltaproteobacteria 28221|Deltaproteobacteria Q PFAM amidohydrolase - - - - - - - - - - - - Amidohydro_1 QTD1_k127_4798126_9 234267.Acid_3202 7.701e-47 181.0 COG0596@1|root,COG0596@2|Bacteria,3Y89S@57723|Acidobacteria 57723|Acidobacteria S PFAM alpha beta hydrolase fold - - - - - - - - - - - - Abhydrolase_1,Abhydrolase_6 QTD1_k127_4798126_7 595537.Varpa_1070 3.136e-62 230.0 COG2334@1|root,COG2334@2|Bacteria,1MXTW@1224|Proteobacteria,2VUCA@28216|Betaproteobacteria 28216|Betaproteobacteria S Aminoglycoside phosphotransferase - - - - - - - - - - - - APH QTD1_k127_4798126_1 172088.AUGA01000003_gene5413 2.565e-145 475.0 COG0160@1|root,COG0160@2|Bacteria,1MX0Y@1224|Proteobacteria,2TRAZ@28211|Alphaproteobacteria,3JTFK@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria E Aminotransferase class-III - - - - - - - - - - - - Aminotran_3 QTD1_k127_4798126_2 627192.SLG_31140 3.503e-136 452.0 COG1113@1|root,COG1113@2|Bacteria,1MUPS@1224|Proteobacteria,2U0PN@28211|Alphaproteobacteria,2KD49@204457|Sphingomonadales 204457|Sphingomonadales E Amino acid permease - - - ko:K11735 - - - - ko00000,ko02000 2.A.3.1.4,2.A.3.1.5 - - AA_permease QTD1_k127_4798126_0 204669.Acid345_0995 1.958e-175 557.0 COG3191@1|root,COG3191@2|Bacteria,3Y699@57723|Acidobacteria 57723|Acidobacteria M Peptidase family S58 - - 3.4.11.19 ko:K01266 - - - - ko00000,ko01000,ko01002 - - - Peptidase_S58 QTD1_k127_4798126_4 1384054.N790_02825 1.303e-75 263.0 COG1262@1|root,COG1262@2|Bacteria,1RAP4@1224|Proteobacteria,1RQ7C@1236|Gammaproteobacteria,1X5A7@135614|Xanthomonadales 135614|Xanthomonadales S Sulfatase-modifying factor enzyme 1 - - - - - - - - - - - - FGE-sulfatase QTD1_k127_4798126_5 243233.MCA0498 4.251e-63 223.0 COG4094@1|root,COG4094@2|Bacteria,1RDV6@1224|Proteobacteria,1SAUX@1236|Gammaproteobacteria,1XGC9@135618|Methylococcales 135618|Methylococcales S NnrU protein - - - - - - - - - - - - NnrU QTD1_k127_4798126_8 272630.MexAM1_META1p3770 5.283e-56 202.0 COG0212@1|root,COG0212@2|Bacteria,1RAZI@1224|Proteobacteria,2U6UH@28211|Alphaproteobacteria,1JU5Y@119045|Methylobacteriaceae 28211|Alphaproteobacteria H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family - - - - - - - - - - - - 5-FTHF_cyc-lig QTD1_k127_4798126_12 517722.AEUE01000002_gene2244 2.574e-18 97.0 298TD@1|root,2ZVXM@2|Bacteria,1PBQQ@1224|Proteobacteria,2UXW0@28211|Alphaproteobacteria,2KC6R@204457|Sphingomonadales 204457|Sphingomonadales - - - - - - - - - - - - - - - QTD1_k127_4798126_6 1267534.KB906754_gene3648 1.505e-62 223.0 298RU@1|root,2ZVW4@2|Bacteria,3Y4I6@57723|Acidobacteria,2JMQI@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - QTD1_k127_4798126_10 1297742.A176_05036 6.138e-34 146.0 COG2972@1|root,COG2972@2|Bacteria,1MXVQ@1224|Proteobacteria,42R4U@68525|delta/epsilon subdivisions,2X799@28221|Deltaproteobacteria 28221|Deltaproteobacteria T Histidine kinase - - 2.7.13.3 ko:K08082 ko02020,map02020 M00493 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - His_kinase QTD1_k127_4798126_11 861299.J421_2096 1.842e-30 126.0 COG3279@1|root,COG3279@2|Bacteria,1ZTKG@142182|Gemmatimonadetes 2|Bacteria K LytTr DNA-binding domain - - - ko:K02477 - - - - ko00000,ko02022 - - - EAL,LytTR,Response_reg QTD1_k127_4829781_7 640511.BC1002_3938 8.138e-11 63.0 COG1409@1|root,COG1409@2|Bacteria,1MUQJ@1224|Proteobacteria,2VJNP@28216|Betaproteobacteria,1K36Q@119060|Burkholderiaceae 28216|Betaproteobacteria S Metallophosphoesterase - - - - - - - - - - - - Metallophos QTD1_k127_4829781_6 1217718.ALOU01000010_gene913 3.727e-28 118.0 COG3794@1|root,COG3794@2|Bacteria,1NKZ5@1224|Proteobacteria,2VW1T@28216|Betaproteobacteria,1K8BA@119060|Burkholderiaceae 28216|Betaproteobacteria C PFAM blue (type 1) copper domain protein - - - - - - - - - - - - Copper-bind,Cupredoxin_1 QTD1_k127_4829781_3 666685.R2APBS1_1714 1.257e-48 179.0 COG2010@1|root,COG2010@2|Bacteria,1MW1W@1224|Proteobacteria,1S1DG@1236|Gammaproteobacteria,1X6MQ@135614|Xanthomonadales 135614|Xanthomonadales C SnoaL-like domain - - - - - - - - - - - - Cytochrome_CBB3,DUF4440 QTD1_k127_4829781_8 1038867.AXAY01000035_gene4457 0.0005067 45.0 2DSQC@1|root,33H1C@2|Bacteria,1NCJN@1224|Proteobacteria,2UJSK@28211|Alphaproteobacteria,3K24C@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_4829781_1 378806.STAUR_6729 1.087e-78 274.0 COG2085@1|root,COG2085@2|Bacteria,1RCXR@1224|Proteobacteria,43070@68525|delta/epsilon subdivisions,2WVFX@28221|Deltaproteobacteria,2Z1E9@29|Myxococcales 28221|Deltaproteobacteria S NADP oxidoreductase coenzyme F420-dependent - - 1.5.1.40 ko:K06988 - - - - ko00000,ko01000 - - - F420_oxidored QTD1_k127_4829781_5 1116472.MGMO_8c00550 3.074e-31 126.0 COG3791@1|root,COG3791@2|Bacteria,1N01M@1224|Proteobacteria,1T0A5@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Glutathione-dependent formaldehyde-activating enzyme - - - - - - - - - - - - GFA QTD1_k127_4829781_4 1120950.KB892707_gene4638 1.63e-34 143.0 COG2365@1|root,COG2365@2|Bacteria,2GK28@201174|Actinobacteria,4DS4X@85009|Propionibacteriales 201174|Actinobacteria T Tyrosine phosphatase family - - 3.1.3.48 ko:K01104 - - - - ko00000,ko01000 - - - Y_phosphatase3 QTD1_k127_4829781_0 1385517.N800_06145 9.162e-112 369.0 COG0697@1|root,COG0697@2|Bacteria,1MZQM@1224|Proteobacteria,1RS0P@1236|Gammaproteobacteria,1X4DJ@135614|Xanthomonadales 135614|Xanthomonadales EG Drug metabolite transporter - - - - - - - - - - - - EamA QTD1_k127_4829781_2 1192034.CAP_7003 6.01e-62 216.0 COG0626@1|root,COG0626@2|Bacteria,1MU57@1224|Proteobacteria,42M67@68525|delta/epsilon subdivisions,2WJQX@28221|Deltaproteobacteria 28221|Deltaproteobacteria E Cys Met metabolism - - 2.5.1.48,4.4.1.11,4.4.1.8 ko:K01739,ko:K01760,ko:K01761 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 M00017 R00654,R00782,R00999,R01286,R01288,R02408,R02508,R03217,R03260,R04770,R04941,R04944,R04945,R04946 RC00020,RC00056,RC00069,RC00196,RC00348,RC00382,RC00420,RC00488,RC00710,RC01209,RC01210,RC01245,RC02303,RC02848,RC02866 ko00000,ko00001,ko00002,ko01000 - - - Cys_Met_Meta_PP QTD1_k127_4838846_7 266265.Bxe_B0273 1.891e-55 197.0 COG0625@1|root,COG0625@2|Bacteria,1MXHH@1224|Proteobacteria,2VH95@28216|Betaproteobacteria,1K5ZQ@119060|Burkholderiaceae 28216|Betaproteobacteria O Belongs to the GST superfamily gstA - 2.5.1.18 ko:K00799 ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418 - R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905 RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944 ko00000,ko00001,ko01000,ko02000 1.A.12.2.2,1.A.12.3.2 - - GST_C,GST_C_3,GST_N,GST_N_3 QTD1_k127_4838846_5 472759.Nhal_1409 1.006e-67 241.0 COG1136@1|root,COG1136@2|Bacteria,1NCFC@1224|Proteobacteria,1S2XY@1236|Gammaproteobacteria,1WYES@135613|Chromatiales 135613|Chromatiales V PFAM ABC transporter related - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran QTD1_k127_4838846_2 383372.Rcas_1858 1.062e-166 554.0 COG0577@1|root,COG0577@2|Bacteria,2G6IW@200795|Chloroflexi,374ZQ@32061|Chloroflexia 32061|Chloroflexia V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD QTD1_k127_4838846_4 227882.SAV_3171 9.817e-80 273.0 COG0500@1|root,COG0500@2|Bacteria,2I5J7@201174|Actinobacteria 201174|Actinobacteria Q Nodulation protein S (NodS) - - - - - - - - - - - - Methyltransf_25 QTD1_k127_4838846_3 483219.LILAB_12630 6.921e-110 367.0 COG5621@1|root,COG5621@2|Bacteria,1MUVF@1224|Proteobacteria,42Q9D@68525|delta/epsilon subdivisions,2WK21@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Lipocalin-like domain - - - - - - - - - - - - CrtC,Lipocalin_9 QTD1_k127_4838846_6 84531.JMTZ01000003_gene2339 3.598e-60 218.0 COG0730@1|root,COG0730@2|Bacteria,1R6MR@1224|Proteobacteria,1S0QW@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Sulfite exporter TauE/SafE - - - - - - - - - - - - TauE QTD1_k127_4838846_8 408672.NBCG_04036 6.389e-40 156.0 COG0251@1|root,COG0251@2|Bacteria,2IFCR@201174|Actinobacteria,4DRCP@85009|Propionibacteriales 201174|Actinobacteria J Endoribonuclease L-PSP - - - - - - - - - - - - Ribonuc_L-PSP QTD1_k127_4838846_1 204669.Acid345_3443 2.82e-216 684.0 COG1574@1|root,COG1574@2|Bacteria,3Y2UF@57723|Acidobacteria,2JIRH@204432|Acidobacteriia 204432|Acidobacteriia S Amidohydrolase family - - - - - - - - - - - - Amidohydro_3 QTD1_k127_4838846_0 748280.NH8B_2766 0.0 1281.0 COG1201@1|root,COG1201@2|Bacteria,1MUSW@1224|Proteobacteria,2VI8X@28216|Betaproteobacteria 28216|Betaproteobacteria L DEAD DEAH box helicase lhr - - ko:K03724 - - - - ko00000,ko01000,ko03400 - - - DEAD,DEAD_assoc,Helicase_C QTD1_k127_48569_8 546271.Selsp_2147 3.097e-07 60.0 COG1629@1|root,COG4771@2|Bacteria,1TSA8@1239|Firmicutes,4H3P2@909932|Negativicutes 909932|Negativicutes P TonB-dependent receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - Plug,TonB_dep_Rec QTD1_k127_48569_2 661478.OP10G_0286 8.217e-119 387.0 COG0157@1|root,COG0157@2|Bacteria 2|Bacteria H quinolinate catabolic process nadC - 2.4.2.19 ko:K00767 ko00760,ko01100,map00760,map01100 M00115 R03348 RC02877 ko00000,ko00001,ko00002,ko01000 - - - QRPTase_C,QRPTase_N QTD1_k127_48569_5 105559.Nwat_1241 1.1e-63 224.0 COG3748@1|root,COG3748@2|Bacteria,1RFIZ@1224|Proteobacteria,1S8F8@1236|Gammaproteobacteria,1X0P1@135613|Chromatiales 135613|Chromatiales S Urate oxidase N-terminal - - - - - - - - - - - - Urate_ox_N QTD1_k127_48569_7 1205753.A989_18558 1.675e-10 64.0 COG0494@1|root,COG3313@1|root,COG0494@2|Bacteria,COG3313@2|Bacteria,1RD2C@1224|Proteobacteria,1SA4Q@1236|Gammaproteobacteria,1X3T9@135614|Xanthomonadales 135614|Xanthomonadales L DNA mismatch repair protein MutT - - - - - - - - - - - - DUF1289,NUDIX QTD1_k127_48569_6 349521.HCH_01764 1.51e-40 156.0 COG0278@1|root,COG0278@2|Bacteria,1MZ4V@1224|Proteobacteria,1S640@1236|Gammaproteobacteria,1XK2I@135619|Oceanospirillales 135619|Oceanospirillales C Belongs to the glutaredoxin family. Monothiol subfamily ydhD - - ko:K07390 - - - - ko00000,ko03029,ko03110 - - - Glutaredoxin QTD1_k127_48569_4 1033802.SSPSH_001221 2.596e-77 274.0 COG0847@1|root,COG0847@2|Bacteria,1MUPK@1224|Proteobacteria,1RMMH@1236|Gammaproteobacteria 1236|Gammaproteobacteria L Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis rnt GO:0000287,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0031123,GO:0034470,GO:0034641,GO:0034660,GO:0042780,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360 - ko:K03683 - - - - ko00000,ko01000,ko03016 - - - RNase_T QTD1_k127_48569_1 557598.LHK_03129 5.653e-140 462.0 COG0418@1|root,COG0418@2|Bacteria,1MUYP@1224|Proteobacteria,2VH6F@28216|Betaproteobacteria,2KPZN@206351|Neisseriales 206351|Neisseriales F Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate pyrC - 3.5.2.3 ko:K01465 ko00240,ko01100,map00240,map01100 M00051 R01993 RC00632 ko00000,ko00001,ko00002,ko01000 - - - Amidohydro_1 QTD1_k127_48569_3 745411.B3C1_05622 1.049e-103 355.0 COG0260@1|root,COG0260@2|Bacteria,1MUF9@1224|Proteobacteria,1RNM1@1236|Gammaproteobacteria,1J4XV@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria E Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides - - - - - - - - - - - - Peptidase_M17 QTD1_k127_48569_0 1335757.SPICUR_00220 7.7e-226 707.0 COG2609@1|root,COG2609@2|Bacteria,1MV21@1224|Proteobacteria,1RN6K@1236|Gammaproteobacteria,1WWE0@135613|Chromatiales 135613|Chromatiales C Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) aceE - 1.2.4.1 ko:K00163 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200 M00307 R00014,R00209,R01699,R03270 RC00004,RC00027,RC00627,RC02742,RC02744,RC02882 br01601,ko00000,ko00001,ko00002,ko01000 - - - Transketolase_N QTD1_k127_485837_2 1095747.HMPREF1049_0313 1.66e-37 147.0 COG1970@1|root,COG1970@2|Bacteria,37AK8@32066|Fusobacteria 32066|Fusobacteria M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell mscL GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - ko:K03282 - - - - ko00000,ko02000 1.A.22.1 - - MscL QTD1_k127_485837_1 935863.AWZR01000002_gene1001 2.375e-123 411.0 COG0006@1|root,COG0006@2|Bacteria,1MURT@1224|Proteobacteria,1RMKT@1236|Gammaproteobacteria,1X3Z6@135614|Xanthomonadales 135614|Xanthomonadales E Splits dipeptides with a prolyl residue in the C- terminal position pepQ - 3.4.13.9 ko:K01271 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M24 QTD1_k127_485837_3 483219.LILAB_14910 4.601e-25 112.0 COG5628@1|root,COG5628@2|Bacteria,1PEIJ@1224|Proteobacteria,432V3@68525|delta/epsilon subdivisions,2WXD7@28221|Deltaproteobacteria,2Z02A@29|Myxococcales 28221|Deltaproteobacteria S -acetyltransferase - - - - - - - - - - - - Acetyltransf_1 QTD1_k127_485837_0 1123504.JQKD01000046_gene1177 6.321e-245 770.0 COG0370@1|root,COG0370@2|Bacteria,1MUZC@1224|Proteobacteria,2VIRG@28216|Betaproteobacteria,4A9RM@80864|Comamonadaceae 28216|Betaproteobacteria P Ferrous iron transport protein B feoB - - ko:K04759 - - - - ko00000,ko02000 9.A.8.1 - - FeoB_C,FeoB_N,Gate QTD1_k127_4875622_4 290398.Csal_3245 7.193e-39 155.0 COG1200@1|root,COG1200@2|Bacteria,1MWN2@1224|Proteobacteria,1RMMQ@1236|Gammaproteobacteria,1XIN2@135619|Oceanospirillales 135619|Oceanospirillales L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) recG - 3.6.4.12 ko:K03655 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C,RecG_wedge QTD1_k127_4875622_3 322710.Avin_02800 7.468e-54 191.0 COG0251@1|root,COG0251@2|Bacteria,1MZ3J@1224|Proteobacteria,1S5XS@1236|Gammaproteobacteria 1236|Gammaproteobacteria J Endoribonuclease tdcF - 3.5.99.10 ko:K09022 - - R11098,R11099 RC03275,RC03354 ko00000,ko01000 - - - Ribonuc_L-PSP QTD1_k127_4875622_0 396588.Tgr7_3185 9.404e-253 803.0 COG0317@1|root,COG0317@2|Bacteria,1MU44@1224|Proteobacteria,1RN3H@1236|Gammaproteobacteria,1WWZ3@135613|Chromatiales 135613|Chromatiales KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance - - 2.7.6.5,3.1.7.2 ko:K01139 ko00230,map00230 - R00336,R00429 RC00002,RC00078 ko00000,ko00001,ko01000,ko03009 - - - ACT_4,HD_4,RelA_SpoT,TGS QTD1_k127_4875622_6 765913.ThidrDRAFT_2101 5.145e-23 100.0 COG1758@1|root,COG1758@2|Bacteria,1N6TX@1224|Proteobacteria,1SCSR@1236|Gammaproteobacteria,1WYPW@135613|Chromatiales 135613|Chromatiales K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits rpoZ - 2.7.7.6 ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 - - - RNA_pol_Rpb6 QTD1_k127_4875622_1 1523503.JPMY01000004_gene1606 9.047e-64 229.0 COG0194@1|root,COG0194@2|Bacteria,1MW92@1224|Proteobacteria,1RN09@1236|Gammaproteobacteria 1236|Gammaproteobacteria F Essential for recycling GMP and indirectly, cGMP gmk GO:0003674,GO:0003824,GO:0004385,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 ko:K00942 ko00230,ko01100,map00230,map01100 M00050 R00332,R02090 RC00002 ko00000,ko00001,ko00002,ko01000 - - iAPECO1_1312.APECO1_2813,iPC815.YPO0040,iSBO_1134.SBO_3729,iSFV_1184.SFV_3881,iSFxv_1172.SFxv_4016,iUTI89_1310.UTI89_C4193 Guanylate_kin QTD1_k127_4875622_2 1234364.AMSF01000075_gene1952 1.783e-61 220.0 COG0127@1|root,COG0127@2|Bacteria,1MUK5@1224|Proteobacteria,1S27C@1236|Gammaproteobacteria,1X4DK@135614|Xanthomonadales 135614|Xanthomonadales F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions rdgB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 ko:K02428 ko00230,map00230 - R00426,R00720,R01855,R02100,R02720,R03531 RC00002 ko00000,ko00001,ko01000 - - - Acetyltransf_1,Ham1p_like QTD1_k127_4875622_5 935567.JAES01000006_gene377 7.504e-29 116.0 COG0689@1|root,COG0689@2|Bacteria,1MVFZ@1224|Proteobacteria,1RNTB@1236|Gammaproteobacteria,1X3QU@135614|Xanthomonadales 135614|Xanthomonadales J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates rph GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 ko:K00989 - - - - ko00000,ko01000,ko03016 - - - RNase_PH,RNase_PH_C QTD1_k127_4908036_1 1380391.JIAS01000008_gene5547 1.251e-167 541.0 COG5598@1|root,COG5598@2|Bacteria,1NQMY@1224|Proteobacteria,2U0NX@28211|Alphaproteobacteria 28211|Alphaproteobacteria H trimethylamine methyltransferase - - 2.1.1.250 ko:K14083 ko00680,ko01120,ko01200,map00680,map01120,map01200 M00563 R09124,R10016 RC00035,RC00732,RC01144,RC02984 ko00000,ko00001,ko00002,ko01000 - - - MTTB QTD1_k127_4908036_5 1038867.AXAY01000009_gene5743 1.906e-106 358.0 COG0604@1|root,COG0604@2|Bacteria,1MX8A@1224|Proteobacteria,2TYVX@28211|Alphaproteobacteria,3JX48@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria C Zinc-binding dehydrogenase - - - - - - - - - - - - ADH_N,ADH_zinc_N,ADH_zinc_N_2 QTD1_k127_4908036_11 1192124.LIG30_2740 1.743e-64 229.0 COG0317@1|root,COG0317@2|Bacteria,1RGUA@1224|Proteobacteria,2VQUA@28216|Betaproteobacteria,1K6XY@119060|Burkholderiaceae 28216|Betaproteobacteria KT SMART metal-dependent phosphohydrolase, HD region - - 2.7.6.5,3.1.7.2 ko:K01139 ko00230,map00230 - R00336,R00429 RC00002,RC00078 ko00000,ko00001,ko01000,ko03009 - - - HD_4 QTD1_k127_4908036_12 748247.AZKH_4403 8.482e-54 195.0 COG3791@1|root,COG3791@2|Bacteria,1NC41@1224|Proteobacteria,2VX4Z@28216|Betaproteobacteria 28216|Betaproteobacteria S Glutathione-dependent formaldehyde-activating - - - - - - - - - - - - - QTD1_k127_4908036_2 1144275.COCOR_07707 3.587e-167 552.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,1MUJ3@1224|Proteobacteria,43B0H@68525|delta/epsilon subdivisions,2X6EK@28221|Deltaproteobacteria 28221|Deltaproteobacteria EU X-Pro dipeptidyl-peptidase (S15 family) - - - - - - - - - - - - PD40,Peptidase_S9 QTD1_k127_4908036_15 574966.KB898647_gene2535 6.066e-16 89.0 COG2050@1|root,COG2050@2|Bacteria,1QU0P@1224|Proteobacteria,1T1K4@1236|Gammaproteobacteria,1XM52@135619|Oceanospirillales 135619|Oceanospirillales Q COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - - - - - - - - - - YiiD_C QTD1_k127_4908036_0 1122604.JONR01000008_gene2157 9.658e-226 711.0 COG2939@1|root,COG2939@2|Bacteria,1MW05@1224|Proteobacteria,1RQJY@1236|Gammaproteobacteria,1X5C0@135614|Xanthomonadales 135614|Xanthomonadales E Serine carboxypeptidase - - - - - - - - - - - - Peptidase_S10 QTD1_k127_4908036_10 452637.Oter_2022 2.589e-77 269.0 COG1028@1|root,COG1028@2|Bacteria 452637.Oter_2022|- IQ oxidoreductase activity, acting on CH-OH group of donors - - - - - - - - - - - - - QTD1_k127_4908036_7 760192.Halhy_3647 3.788e-88 317.0 COG2423@1|root,COG2423@2|Bacteria,4NG51@976|Bacteroidetes,1IZNI@117747|Sphingobacteriia 976|Bacteroidetes E COGs COG2423 ornithine cyclodeaminase mu-crystallin homolog - - 1.5.1.51,4.3.1.12 ko:K01750,ko:K21721 ko00330,ko01110,ko01130,ko01230,map00330,map01110,map01130,map01230 - R00671 RC00354 ko00000,ko00001,ko01000 - - - OCD_Mu_crystall QTD1_k127_4908036_8 204669.Acid345_0999 2.515e-83 302.0 COG1680@1|root,COG1680@2|Bacteria,3Y7Q7@57723|Acidobacteria 57723|Acidobacteria V Beta-lactamase - - - - - - - - - - - - Beta-lactamase QTD1_k127_4908036_6 1123073.KB899242_gene1659 5.832e-99 332.0 COG2173@1|root,COG2173@2|Bacteria,1RENK@1224|Proteobacteria,1S3SJ@1236|Gammaproteobacteria,1X64M@135614|Xanthomonadales 135614|Xanthomonadales M Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide ddpX - 3.4.13.22 ko:K08641 ko01502,ko02020,map01502,map02020 M00651 - - ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504 - - - Peptidase_M15 QTD1_k127_4908036_4 1242864.D187_006334 1.196e-125 422.0 COG0842@1|root,COG0842@2|Bacteria,1MUH1@1224|Proteobacteria,42QX4@68525|delta/epsilon subdivisions,2WMRS@28221|Deltaproteobacteria,2YUBQ@29|Myxococcales 28221|Deltaproteobacteria V ABC-2 type transporter - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane QTD1_k127_4908036_3 1504672.669785129 4.438e-145 467.0 COG1131@1|root,COG1131@2|Bacteria,1MUW7@1224|Proteobacteria,2VM20@28216|Betaproteobacteria,4AH55@80864|Comamonadaceae 28216|Betaproteobacteria V ABC transporter hndI - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran QTD1_k127_4908036_14 946483.Cenrod_0249 6.023e-30 134.0 COG4916@1|root,COG4916@2|Bacteria,1RBBR@1224|Proteobacteria,2VTPZ@28216|Betaproteobacteria 28216|Betaproteobacteria S TIR domain - - - - - - - - - - - - SIR2_2,TIR_2 QTD1_k127_4908036_13 396588.Tgr7_0187 1.276e-36 144.0 2DMVP@1|root,32TYU@2|Bacteria,1MZ9J@1224|Proteobacteria,1S9Z6@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_4908036_9 1122603.ATVI01000005_gene3872 7.707e-79 271.0 COG0583@1|root,COG0583@2|Bacteria,1MW16@1224|Proteobacteria,1RS6U@1236|Gammaproteobacteria,1X6WR@135614|Xanthomonadales 135614|Xanthomonadales K LysR substrate binding domain - - - - - - - - - - - - HTH_1,LysR_substrate QTD1_k127_490976_4 391615.ABSJ01000002_gene491 6.902e-18 90.0 COG1162@1|root,COG1162@2|Bacteria,1MUEF@1224|Proteobacteria,1RMMB@1236|Gammaproteobacteria,1J4IT@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit rsgA GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0022613,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0036094,GO:0042254,GO:0042274,GO:0043167,GO:0043168,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 3.1.3.100 ko:K06949 ko00730,ko01100,map00730,map01100 - R00615,R02135 RC00002,RC00017 ko00000,ko00001,ko01000,ko03009 - - iAF1260.b4161,iBWG_1329.BWG_3876,iECDH10B_1368.ECDH10B_4356,iECDH1ME8569_1439.ECDH1ME8569_4021,iEKO11_1354.EKO11_4148,iEcDH1_1363.EcDH1_3829,iEcolC_1368.EcolC_3849,iJO1366.b4161,iUMNK88_1353.UMNK88_5099,iY75_1357.Y75_RS21675 RsgA_GTPase QTD1_k127_490976_2 1123401.JHYQ01000013_gene628 1.54e-71 249.0 COG1949@1|root,COG1949@2|Bacteria,1R9WX@1224|Proteobacteria,1S217@1236|Gammaproteobacteria,460FA@72273|Thiotrichales 72273|Thiotrichales L 3'-to-5' exoribonuclease specific for small oligoribonucleotides orn - - ko:K13288 ko03008,map03008 - - - ko00000,ko00001,ko01000,ko03009,ko03019 - - - RNase_T QTD1_k127_490976_3 1123073.KB899241_gene2335 5.82e-54 198.0 COG3791@1|root,COG3791@2|Bacteria,1RHWZ@1224|Proteobacteria,1S4HQ@1236|Gammaproteobacteria,1X72V@135614|Xanthomonadales 135614|Xanthomonadales S Glutathione-dependent formaldehyde-activating enzyme - - - - - - - - - - - - GFA QTD1_k127_490976_0 1448139.AI20_05985 0.0 1092.0 COG0574@1|root,COG1080@1|root,COG0574@2|Bacteria,COG1080@2|Bacteria,1MU0R@1224|Proteobacteria,1RP3T@1236|Gammaproteobacteria,1Y3YN@135624|Aeromonadales 135624|Aeromonadales H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate ppsA - 2.7.9.2 ko:K01007 ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200 M00173,M00374 R00199 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000 - - - PEP-utilizers,PEP-utilizers_C,PPDK_N QTD1_k127_490976_1 1121015.N789_12450 1.95e-90 305.0 COG1806@1|root,COG1806@2|Bacteria,1MUHU@1224|Proteobacteria,1RPHX@1236|Gammaproteobacteria,1X41E@135614|Xanthomonadales 135614|Xanthomonadales S Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation - - 2.7.11.33,2.7.4.28 ko:K09773 - - - - ko00000,ko01000 - - - Kinase-PPPase QTD1_k127_490976_5 396588.Tgr7_1485 6.179e-09 64.0 COG3151@1|root,COG3151@2|Bacteria,1NAPI@1224|Proteobacteria,1SEY8@1236|Gammaproteobacteria,1WYT2@135613|Chromatiales 135613|Chromatiales S Protein of unknown function (DUF1249) - - - ko:K09920 - - - - ko00000 - - - DUF1249 QTD1_k127_4913232_0 713586.KB900536_gene1690 0.0 1111.0 COG0643@1|root,COG2198@1|root,COG0643@2|Bacteria,COG2198@2|Bacteria,1MUAG@1224|Proteobacteria,1RMS6@1236|Gammaproteobacteria,1WWZQ@135613|Chromatiales 135613|Chromatiales T response regulator receiver - - - ko:K02487,ko:K06596 ko02020,ko02025,map02020,map02025 M00507 - - ko00000,ko00001,ko00002,ko01001,ko02022,ko02035 - - - CheW,H-kinase_dim,HATPase_c,Hpt,Response_reg QTD1_k127_4913232_6 1268068.PG5_24790 3.037e-21 104.0 COG0835@1|root,COG0835@2|Bacteria,1NA8G@1224|Proteobacteria,1SCB2@1236|Gammaproteobacteria 1236|Gammaproteobacteria NT chemotaxis signal transduction protein chpC - - ko:K06598 ko02020,ko02025,map02020,map02025 - - - ko00000,ko00001,ko02035 - - - CheW QTD1_k127_4913232_2 1123073.KB899241_gene2627 5.208e-66 240.0 COG2755@1|root,COG2755@2|Bacteria,1RE9P@1224|Proteobacteria,1SF9P@1236|Gammaproteobacteria,1X5EE@135614|Xanthomonadales 135614|Xanthomonadales E GDSL-like Lipase/Acylhydrolase - - - - - - - - - - - - Lipase_GDSL_2 QTD1_k127_4913232_1 366602.Caul_3051 9.223e-82 279.0 COG4798@1|root,COG4798@2|Bacteria,1RHGZ@1224|Proteobacteria,2U7R8@28211|Alphaproteobacteria,2KJUA@204458|Caulobacterales 204458|Caulobacterales S Methyltransferase - - - - - - - - - - - - - QTD1_k127_4913232_5 861299.J421_6000 2.339e-28 123.0 COG0789@1|root,COG0789@2|Bacteria,1ZVAN@142182|Gemmatimonadetes 142182|Gemmatimonadetes K MerR, DNA binding - - - ko:K13639 - - - - ko00000,ko03000 - - - - QTD1_k127_4913232_3 1123256.KB907926_gene970 3.487e-65 235.0 COG1385@1|root,COG1385@2|Bacteria,1MXCU@1224|Proteobacteria,1RPBN@1236|Gammaproteobacteria,1X36H@135614|Xanthomonadales 135614|Xanthomonadales J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit - - 2.1.1.193 ko:K09761 - - - - ko00000,ko01000,ko03009 - - - Methyltrans_RNA QTD1_k127_4913232_4 1453503.AU05_21895 1.894e-42 166.0 COG0161@1|root,COG0161@2|Bacteria,1MU2N@1224|Proteobacteria,1RP0W@1236|Gammaproteobacteria,1YE2Q@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria H Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor bioA GO:0003674,GO:0003824,GO:0004015,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.6.1.62 ko:K00833 ko00780,ko01100,map00780,map01100 M00123,M00573,M00577 R03231 RC00006,RC00887 ko00000,ko00001,ko00002,ko01000,ko01007 - - iUTI89_1310.UTI89_C0772,iZ_1308.Z0993 Aminotran_3 QTD1_k127_4929892_2 1038859.AXAU01000008_gene1896 4.028e-67 237.0 COG2102@1|root,COG2102@2|Bacteria,1R97Y@1224|Proteobacteria,2VG9S@28211|Alphaproteobacteria,3K6IP@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria S Diphthamide synthase - - - - - - - - - - - - Diphthami_syn_2 QTD1_k127_4929892_6 105559.Nwat_0842 1.32e-10 70.0 2C852@1|root,32YB2@2|Bacteria,1RH28@1224|Proteobacteria 1224|Proteobacteria S Domain of unknown function (DUF4136) VPA1096 - - - - - - - - - - - DUF4136 QTD1_k127_4929892_1 1123368.AUIS01000015_gene2649 3.88e-96 325.0 COG0586@1|root,COG0607@1|root,COG0586@2|Bacteria,COG0607@2|Bacteria,1MX4M@1224|Proteobacteria,1RPB1@1236|Gammaproteobacteria,2NCA8@225057|Acidithiobacillales 225057|Acidithiobacillales P SNARE associated Golgi protein - - - ko:K03975 - - - - ko00000 - - - SNARE_assoc QTD1_k127_4929892_4 1283300.ATXB01000001_gene794 1.053e-46 183.0 COG2193@1|root,COG2193@2|Bacteria,1RF3C@1224|Proteobacteria,1S72I@1236|Gammaproteobacteria,1XF6G@135618|Methylococcales 135618|Methylococcales P Ferritin-like domain - - - - - - - - - - - - Ferritin QTD1_k127_4929892_3 1294143.H681_20020 1.659e-56 201.0 COG0386@1|root,COG0386@2|Bacteria,1RD1R@1224|Proteobacteria,1S425@1236|Gammaproteobacteria 1236|Gammaproteobacteria O Belongs to the glutathione peroxidase family btuE - 1.11.1.9 ko:K00432 ko00480,ko00590,ko04918,map00480,map00590,map04918 - R00274,R07034,R07035 RC00011,RC00982 ko00000,ko00001,ko01000 - - iE2348C_1286.E2348C_1795,iEC55989_1330.EC55989_1878,iECABU_c1320.ECABU_c19650,iEcHS_1320.EcHS_A1790,iLF82_1304.LF82_0251,iNRG857_1313.NRG857_08570,iSFV_1184.SFV_1513,ic_1306.c2106 GSHPx QTD1_k127_4929892_5 330084.JNYZ01000044_gene1999 4.518e-14 85.0 COG1893@1|root,COG1893@2|Bacteria,2I5ZI@201174|Actinobacteria 201174|Actinobacteria H Ketopantoate reductase PanE/ApbA - - 1.1.1.169 ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R02472 RC00726 ko00000,ko00001,ko00002,ko01000 - - - ApbA,ApbA_C QTD1_k127_4929892_0 1122604.JONR01000017_gene4356 1.174e-162 518.0 COG0339@1|root,COG0339@2|Bacteria,1MU1K@1224|Proteobacteria,1RMXI@1236|Gammaproteobacteria,1X3Q6@135614|Xanthomonadales 135614|Xanthomonadales E Dipeptidyl carboxypeptidase dcp2 - 3.4.15.5 ko:K01284 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M3 QTD1_k127_4938283_10 1457393.AZ09_14815 4.319e-05 48.0 COG0007@1|root,COG1648@1|root,COG0007@2|Bacteria,COG1648@2|Bacteria,1MUI0@1224|Proteobacteria,2TRJC@28211|Alphaproteobacteria,2JQIR@204441|Rhodospirillales 204441|Rhodospirillales H Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme cysG - 1.3.1.76,2.1.1.107,4.99.1.4 ko:K02302,ko:K02303 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R02864,R03194,R03947 RC00003,RC00871,RC01012,RC01034 ko00000,ko00001,ko00002,ko01000 - - - CysG_dimeriser,NAD_binding_7,Sirohm_synth_M,TP_methylase QTD1_k127_4938283_2 314278.NB231_04490 7.652e-144 464.0 COG0031@1|root,COG0031@2|Bacteria,1MUBE@1224|Proteobacteria,1RN6J@1236|Gammaproteobacteria,1WX2N@135613|Chromatiales 135613|Chromatiales E Belongs to the cysteine synthase cystathionine beta- synthase family - - 2.5.1.47,4.2.1.22 ko:K01697,ko:K01738 ko00260,ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 M00021,M00035,M00338 R00891,R00897,R01290,R03601,R04859,R04942 RC00020,RC00056,RC00069,RC00256,RC00489,RC01246,RC02814,RC02821 ko00000,ko00001,ko00002,ko01000 - - - PALP QTD1_k127_4938283_5 1121106.JQKB01000028_gene4177 9.005e-86 290.0 COG4149@1|root,COG4149@2|Bacteria,1MUXR@1224|Proteobacteria,2TSYJ@28211|Alphaproteobacteria,2JR2U@204441|Rhodospirillales 204441|Rhodospirillales P COG4149 ABC-type molybdate transport system, permease component modB - - ko:K02018 ko02010,map02010 M00189 - - ko00000,ko00001,ko00002,ko02000 3.A.1.8 - - BPD_transp_1 QTD1_k127_4938283_4 1168059.KB899087_gene364 2.554e-88 314.0 COG4148@1|root,COG4148@2|Bacteria,1MU8K@1224|Proteobacteria,2TR1Z@28211|Alphaproteobacteria,3EYXI@335928|Xanthobacteraceae 28211|Alphaproteobacteria P Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system modC GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.29 ko:K02017 ko02010,map02010 M00189 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.8 - - ABC_tran,TOBE QTD1_k127_4938283_6 522306.CAP2UW1_1274 5.563e-84 289.0 COG0500@1|root,COG2226@2|Bacteria,1MVXG@1224|Proteobacteria,2VM9F@28216|Betaproteobacteria 28216|Betaproteobacteria H methyltransferase - - 2.1.1.163,2.1.1.201 ko:K03183 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116,M00117 R04990,R04993,R06859,R08774,R09736 RC00003,RC01253,RC01662 ko00000,ko00001,ko00002,ko01000 - - - Ubie_methyltran QTD1_k127_4938283_7 1304883.KI912532_gene831 6.143e-72 261.0 COG0251@1|root,COG0251@2|Bacteria,1NQGP@1224|Proteobacteria,2VMPK@28216|Betaproteobacteria,2KW2E@206389|Rhodocyclales 206389|Rhodocyclales J pteridine-dependent deoxygenase - - - - - - - - - - - - - QTD1_k127_4938283_1 365046.Rta_02680 2.178e-175 561.0 COG0644@1|root,COG0644@2|Bacteria,1MZVI@1224|Proteobacteria,2VH6J@28216|Betaproteobacteria,4ABDG@80864|Comamonadaceae 28216|Betaproteobacteria C FAD dependent oxidoreductase - - - - - - - - - - - - FAD_binding_3,Trp_halogenase QTD1_k127_4938283_0 991905.SL003B_2151 5.192e-266 840.0 COG1012@1|root,COG2030@1|root,COG1012@2|Bacteria,COG2030@2|Bacteria,1MWD4@1224|Proteobacteria,2TUPI@28211|Alphaproteobacteria 28211|Alphaproteobacteria CI phenylacetic acid degradation protein paaN - 1.2.1.91,3.3.2.12 ko:K02618 ko00360,ko01120,map00360,map01120 - R09820,R09836 RC00080,RC02667 ko00000,ko00001,ko01000 - - - Aldedh,MaoC_dehydratas QTD1_k127_4938283_8 1149133.ppKF707_2131 1.458e-41 164.0 COG2050@1|root,COG2050@2|Bacteria,1RH35@1224|Proteobacteria,1S4EZ@1236|Gammaproteobacteria,1YFYA@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria Q Thioesterase superfamily paaI GO:0003674,GO:0003824,GO:0016289,GO:0016787,GO:0016788,GO:0016790 - ko:K02614 ko00360,map00360 - R09840 RC00004,RC00014 ko00000,ko00001,ko01000 - - iBWG_1329.BWG_1225,iEC55989_1330.EC55989_1532,iECDH10B_1368.ECDH10B_1521,iECDH1ME8569_1439.EcDH1_2249,iECIAI1_1343.ECIAI1_1396,iECO103_1326.ECO103_1533,iECO111_1330.ECO111_1790,iECO26_1355.ECO26_2000,iECSE_1348.ECSE_1481,iEKO11_1354.EKO11_2417,iETEC_1333.ETEC_1471,iEcDH1_1363.EcDH1_2249,iEcE24377_1341.EcE24377A_1581,iEcHS_1320.EcHS_A1483,iEcolC_1368.EcolC_2259,iUMNK88_1353.UMNK88_1803,iY75_1357.Y75_RS07340 4HBT QTD1_k127_4938283_3 1349767.GJA_641 8.664e-102 343.0 COG1024@1|root,COG1024@2|Bacteria,1MVQN@1224|Proteobacteria,2VHE9@28216|Betaproteobacteria,472BK@75682|Oxalobacteraceae 28216|Betaproteobacteria I enoyl-CoA hydratase paaG - 5.3.3.18 ko:K15866 ko00360,ko01120,map00360,map01120 - R09837,R09839 RC00004,RC00326,RC02689,RC03003 ko00000,ko00001,ko01000 - - - ECH_1 QTD1_k127_4938283_9 1392838.AWNM01000004_gene1859 2.168e-27 114.0 COG1018@1|root,COG1018@2|Bacteria,1MY2Q@1224|Proteobacteria,2VKK1@28216|Betaproteobacteria,3T2MM@506|Alcaligenaceae 28216|Betaproteobacteria C Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 paaE - - ko:K02613 ko00360,ko01120,map00360,map01120 - R09838 RC02690 ko00000,ko00001 - - - FAD_binding_6,Fer2,NAD_binding_1 QTD1_k127_4940919_3 1121015.N789_10575 2.374e-143 464.0 COG0577@1|root,COG0577@2|Bacteria,1MX7X@1224|Proteobacteria,1RRH7@1236|Gammaproteobacteria,1X430@135614|Xanthomonadales 135614|Xanthomonadales V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD QTD1_k127_4940919_2 1121015.N789_10570 1.94e-147 486.0 COG0577@1|root,COG0577@2|Bacteria,1MWBK@1224|Proteobacteria,1RPZF@1236|Gammaproteobacteria,1X3MX@135614|Xanthomonadales 135614|Xanthomonadales V ABC-type antimicrobial peptide transport system, permease component - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD QTD1_k127_4940919_6 666685.R2APBS1_3324 4.076e-107 354.0 COG1136@1|root,COG1136@2|Bacteria,1MU45@1224|Proteobacteria,1RSA2@1236|Gammaproteobacteria,1X3CK@135614|Xanthomonadales 135614|Xanthomonadales V ABC transporter - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran QTD1_k127_4940919_5 1163408.UU9_07491 1.775e-120 400.0 COG0845@1|root,COG0845@2|Bacteria,1MUMV@1224|Proteobacteria,1S0KD@1236|Gammaproteobacteria,1X3ST@135614|Xanthomonadales 135614|Xanthomonadales M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - HlyD_D23 QTD1_k127_4940919_11 309807.SRU_0753 4.091e-07 61.0 COG0457@1|root,COG0457@2|Bacteria 309807.SRU_0753|- S peptidyl-tyrosine sulfation - - - - - - - - - - - - - QTD1_k127_4940919_7 1442599.JAAN01000046_gene2710 1.146e-96 325.0 COG0084@1|root,COG0084@2|Bacteria,1MXN8@1224|Proteobacteria,1RNCC@1236|Gammaproteobacteria,1X3N8@135614|Xanthomonadales 135614|Xanthomonadales L Preprotein translocase subunit TatD tatD - - ko:K03424 - - - - ko00000,ko01000 - - - TatD_DNase QTD1_k127_4940919_1 1121013.P873_04860 5.589e-185 589.0 COG0624@1|root,COG0624@2|Bacteria,1MW20@1224|Proteobacteria,1RPN7@1236|Gammaproteobacteria,1X4BQ@135614|Xanthomonadales 135614|Xanthomonadales E peptidase M20 - - - - - - - - - - - - M20_dimer,Peptidase_M20 QTD1_k127_4940919_8 686340.Metal_1944 2.231e-85 297.0 COG0500@1|root,COG2226@2|Bacteria,1MXP4@1224|Proteobacteria,1SF4K@1236|Gammaproteobacteria,1XEMW@135618|Methylococcales 135618|Methylococcales Q Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - - - - - - - - - - Ubie_methyltran QTD1_k127_4940919_10 754477.Q7C_2667 6.216e-16 86.0 2CI2R@1|root,2ZCPY@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - NERD QTD1_k127_4940919_4 1163407.UU7_12334 8.075e-136 445.0 COG0498@1|root,COG0498@2|Bacteria,1MUWQ@1224|Proteobacteria,1RQ0H@1236|Gammaproteobacteria,1X541@135614|Xanthomonadales 135614|Xanthomonadales E Threonine synthase thrC - 4.2.3.1 ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 M00018 R01466,R05086 RC00017,RC00526 ko00000,ko00001,ko00002,ko01000 - - - PALP,Thr_synth_N QTD1_k127_4940919_9 1118235.CAJH01000010_gene610 1.216e-78 280.0 COG0083@1|root,COG0083@2|Bacteria,1MW8I@1224|Proteobacteria,1RMYR@1236|Gammaproteobacteria,1X3BS@135614|Xanthomonadales 135614|Xanthomonadales E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate thrB GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004413,GO:0006082,GO:0006520,GO:0006555,GO:0006566,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009088,GO:0009092,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.1.39 ko:K00872 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 M00018 R01771 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - GHMP_kinases_C,GHMP_kinases_N QTD1_k127_4940919_0 1211114.ALIP01000111_gene1254 9.024e-252 795.0 COG0460@1|root,COG0527@1|root,COG0460@2|Bacteria,COG0527@2|Bacteria,1MW3H@1224|Proteobacteria,1RN1G@1236|Gammaproteobacteria,1X4R3@135614|Xanthomonadales 135614|Xanthomonadales E homoserine dehydrogenase thrA - 1.1.1.3,2.7.2.4 ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00017,M00018,M00526,M00527 R00480,R01773,R01775 RC00002,RC00043,RC00087 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase,ACT,ACT_7,Homoserine_dh,NAD_binding_3 QTD1_k127_4961613_4 1282360.ABAC460_04990 5.754e-12 71.0 COG2968@1|root,COG2968@2|Bacteria,1RH7T@1224|Proteobacteria,2U981@28211|Alphaproteobacteria,2KGEZ@204458|Caulobacterales 204458|Caulobacterales S Protein of unknown function (DUF541) - - - ko:K09807 - - - - ko00000 - - - SIMPL QTD1_k127_4961613_6 1033802.SSPSH_003410 0.000452 51.0 COG1871@1|root,COG1871@2|Bacteria,1RDDB@1224|Proteobacteria,1S41X@1236|Gammaproteobacteria 1236|Gammaproteobacteria NT Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis cheD GO:0006935,GO:0008150,GO:0009605,GO:0040011,GO:0042221,GO:0042330,GO:0050896 3.5.1.44 ko:K03411 ko02030,map02030 - - - ko00000,ko00001,ko01000,ko02035 - - - CheD QTD1_k127_4961613_5 1442599.JAAN01000045_gene2777 2.29e-09 65.0 COG3209@1|root,COG3209@2|Bacteria,1MVV1@1224|Proteobacteria,1RP75@1236|Gammaproteobacteria,1X4CP@135614|Xanthomonadales 135614|Xanthomonadales M RHS Repeat - - - - - - - - - - - - RHS_repeat QTD1_k127_4961613_0 1123261.AXDW01000009_gene26 1.692e-269 843.0 COG0445@1|root,COG0445@2|Bacteria,1MU6F@1224|Proteobacteria,1RMM1@1236|Gammaproteobacteria,1X36F@135614|Xanthomonadales 135614|Xanthomonadales D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 gidA GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - ko:K03495 - - R08701 RC00053,RC00209,RC00870 ko00000,ko03016,ko03036 - - - GIDA,GIDA_assoc QTD1_k127_4961613_2 767434.Fraau_0442 4.618e-103 348.0 COG0284@1|root,COG0284@2|Bacteria,1MWH5@1224|Proteobacteria,1RSMJ@1236|Gammaproteobacteria,1X4P7@135614|Xanthomonadales 135614|Xanthomonadales F Belongs to the OMP decarboxylase family. Type 2 subfamily pyrF - 4.1.1.23 ko:K01591 ko00240,ko01100,map00240,map01100 M00051 R00965 RC00409 ko00000,ko00001,ko00002,ko01000 - - - OMPdecase QTD1_k127_4961613_1 1122604.JONR01000006_gene2654 6.392e-143 474.0 COG4166@1|root,COG4166@2|Bacteria,1P91R@1224|Proteobacteria,1RN57@1236|Gammaproteobacteria,1X48I@135614|Xanthomonadales 135614|Xanthomonadales E Bacterial extracellular solute-binding proteins, family 5 Middle - - - ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00439 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 - - SBP_bac_5 QTD1_k127_4961613_3 1187851.A33M_1256 2.511e-15 80.0 COG1280@1|root,COG1280@2|Bacteria,1MXAI@1224|Proteobacteria,2TSWP@28211|Alphaproteobacteria,3FDBP@34008|Rhodovulum 28211|Alphaproteobacteria E LysE type translocator - - - - - - - - - - - - LysE QTD1_k127_4966133_7 1057002.KB905370_gene708 1.506e-79 271.0 COG3842@1|root,COG3842@2|Bacteria,1MU3I@1224|Proteobacteria,2TQMJ@28211|Alphaproteobacteria,4B8X7@82115|Rhizobiaceae 28211|Alphaproteobacteria P Part of the ABC transporter complex potABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system potA GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015846,GO:0015847,GO:0016020,GO:0016021,GO:0031224,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - ko:K11076 ko02010,map02010 M00300 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11.2 - - ABC_tran,TOBE_2 QTD1_k127_4966133_4 392499.Swit_0921 6.667e-151 509.0 COG4773@1|root,COG4773@2|Bacteria,1R4DT@1224|Proteobacteria,2TYEM@28211|Alphaproteobacteria,2KEKY@204457|Sphingomonadales 204457|Sphingomonadales P TonB dependent receptor - - - - - - - - - - - - Plug,TonB_dep_Rec QTD1_k127_4966133_2 272624.lpg1087 2.121e-155 507.0 COG0728@1|root,COG0728@2|Bacteria,1MUH0@1224|Proteobacteria,1RMXX@1236|Gammaproteobacteria,1JDAP@118969|Legionellales 118969|Legionellales S Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane - - - ko:K03980 - - - - ko00000,ko01011,ko02000 2.A.66.4 - - MVIN QTD1_k127_4966133_9 1278073.MYSTI_04273 2.152e-07 61.0 2E4EC@1|root,32Z9K@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - OMP_b-brl QTD1_k127_4966133_5 450851.PHZ_c0467 1.757e-118 392.0 COG3741@1|root,COG3741@2|Bacteria,1MY4D@1224|Proteobacteria,2TSC3@28211|Alphaproteobacteria,2KGIG@204458|Caulobacterales 204458|Caulobacterales E N-formylglutamate amidohydrolase hutG - 3.5.1.68,3.5.3.8 ko:K01458,ko:K01479 ko00340,ko00630,ko01100,map00340,map00630,map01100 M00045 R00525,R02285 RC00165,RC00221,RC00323,RC00681 ko00000,ko00001,ko00002,ko01000 - - - FGase QTD1_k127_4966133_1 1205680.CAKO01000002_gene2316 7.506e-183 582.0 COG0402@1|root,COG0402@2|Bacteria,1MUFE@1224|Proteobacteria,2TR3A@28211|Alphaproteobacteria,2JPEJ@204441|Rhodospirillales 204441|Rhodospirillales F Amidohydrolase family - - 3.5.3.13 ko:K05603 ko00340,map00340 - R02286 RC00682 ko00000,ko00001,ko01000 - - - Amidohydro_1 QTD1_k127_4966133_0 204669.Acid345_2533 1.435e-287 898.0 COG4447@1|root,COG4447@2|Bacteria,3Y69Z@57723|Acidobacteria 57723|Acidobacteria S Sortilin, neurotensin receptor 3, - - - - - - - - - - - - Sortilin-Vps10 QTD1_k127_4966133_6 204669.Acid345_2533 2.314e-96 327.0 COG4447@1|root,COG4447@2|Bacteria,3Y69Z@57723|Acidobacteria 57723|Acidobacteria S Sortilin, neurotensin receptor 3, - - - - - - - - - - - - Sortilin-Vps10 QTD1_k127_4966133_3 1396141.BATP01000034_gene4194 1.847e-154 495.0 COG0451@1|root,COG0451@2|Bacteria,46TWG@74201|Verrucomicrobia 74201|Verrucomicrobia GM 3-beta hydroxysteroid dehydrogenase/isomerase family - - - - - - - - - - - - Epimerase QTD1_k127_4966133_8 1454004.AW11_03265 5.015e-54 207.0 COG1807@1|root,COG1807@2|Bacteria,1NMIZ@1224|Proteobacteria,2VMHK@28216|Betaproteobacteria,1KQDW@119066|unclassified Betaproteobacteria 28216|Betaproteobacteria M Dolichyl-phosphate-mannose-protein mannosyltransferase arnT - - - - - - - - - - - PMT,PMT_2 QTD1_k127_4979222_3 519989.ECTPHS_12428 3.962e-21 96.0 COG2137@1|root,COG2137@2|Bacteria,1N6P6@1224|Proteobacteria,1SCMF@1236|Gammaproteobacteria,1WYJU@135613|Chromatiales 135613|Chromatiales S Modulates RecA activity recX - - ko:K03565 - - - - ko00000,ko03400 - - - RecX QTD1_k127_4979222_0 396588.Tgr7_1289 0.0 1122.0 COG0013@1|root,COG0013@2|Bacteria,1MU9A@1224|Proteobacteria,1RMWZ@1236|Gammaproteobacteria,1WXPB@135613|Chromatiales 135613|Chromatiales J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain alaS - 6.1.1.7 ko:K01872 ko00970,map00970 M00359,M00360 R03038 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - DHHA1,tRNA-synt_2c,tRNA_SAD QTD1_k127_4979222_5 1231185.BAMP01000117_gene1490 7.923e-06 49.0 COG1961@1|root,COG1961@2|Bacteria,1MWCZ@1224|Proteobacteria,2TRIY@28211|Alphaproteobacteria,43HGG@69277|Phyllobacteriaceae 28211|Alphaproteobacteria L Recombinase zinc beta ribbon domain - - - - - - - - - - - - Recombinase,Resolvase,Zn_ribbon_recom QTD1_k127_4979222_2 1144319.PMI16_00896 2.377e-26 111.0 COG2261@1|root,COG2261@2|Bacteria 2|Bacteria S Transglycosylase associated protein - - - - - - - - - - - - Transgly_assoc QTD1_k127_4979222_1 765911.Thivi_0796 1.302e-77 275.0 COG4262@1|root,COG4262@2|Bacteria,1RFZS@1224|Proteobacteria,1S1NP@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - - - - - - - - - - - QTD1_k127_4985074_4 1144305.PMI02_01920 2.131e-72 249.0 COG0665@1|root,COG0665@2|Bacteria,1MVM6@1224|Proteobacteria,2TRM7@28211|Alphaproteobacteria,2K1JV@204457|Sphingomonadales 204457|Sphingomonadales E sarcosine oxidase, beta subunit - - 1.5.3.1 ko:K00303 ko00260,ko01100,map00260,map01100 - R00610 RC00060,RC00557 ko00000,ko00001,ko01000 - - - DAO QTD1_k127_4985074_2 1380394.JADL01000010_gene4357 1.786e-137 447.0 COG0646@1|root,COG0646@2|Bacteria 2|Bacteria E methionine synthase metH - 2.1.1.13,2.1.1.5 ko:K00544,ko:K00548 ko00260,ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00260,map00270,map00450,map00670,map01100,map01110,map01230 M00017 R00946,R02821,R09365 RC00035,RC00113,RC00496,RC01241 ko00000,ko00001,ko00002,ko01000 - - - B12-binding,B12-binding_2,Pterin_bind,S-methyl_trans QTD1_k127_4985074_3 536019.Mesop_5215 3.66e-76 264.0 COG0697@1|root,COG0697@2|Bacteria,1R7AI@1224|Proteobacteria,2U7MZ@28211|Alphaproteobacteria,43K2U@69277|Phyllobacteriaceae 28211|Alphaproteobacteria EG EamA-like transporter family - - - - - - - - - - - - EamA QTD1_k127_4985074_1 667632.KB890218_gene286 2.252e-192 616.0 COG0405@1|root,COG0405@2|Bacteria,1MUV6@1224|Proteobacteria,2VI60@28216|Betaproteobacteria,1K0ZI@119060|Burkholderiaceae 28216|Betaproteobacteria M gamma-glutamyltransferase ggt - 2.3.2.2,3.4.19.13 ko:K00681 ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100 - R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935 RC00064,RC00090,RC00096 ko00000,ko00001,ko01000,ko01002 - - - G_glu_transpept QTD1_k127_4985074_0 1380394.JADL01000009_gene3134 3.407e-306 964.0 COG0404@1|root,COG0665@1|root,COG0404@2|Bacteria,COG0665@2|Bacteria,1MUXJ@1224|Proteobacteria,2TRGS@28211|Alphaproteobacteria,2JRC3@204441|Rhodospirillales 204441|Rhodospirillales E FAD dependent oxidoreductase central domain - - - - - - - - - - - - DAO,FAO_M,GCV_T,GCV_T_C QTD1_k127_4985074_5 426117.M446_3866 1.438e-37 144.0 COG0404@1|root,COG0665@1|root,COG0404@2|Bacteria,COG0665@2|Bacteria,1MUXJ@1224|Proteobacteria,2TRGS@28211|Alphaproteobacteria,1JZ2F@119045|Methylobacteriaceae 28211|Alphaproteobacteria E FAD dependent oxidoreductase central domain sardh - 1.5.3.19 ko:K19191 ko00760,ko01120,map00760,map01120 - R10102 RC00060,RC00557 ko00000,ko00001,ko01000 - - - DAO,FAO_M,GCV_T,GCV_T_C QTD1_k127_498639_8 1122604.JONR01000001_gene1836 4.569e-14 72.0 COG0750@1|root,COG0750@2|Bacteria,1MU91@1224|Proteobacteria,1RMIX@1236|Gammaproteobacteria,1X3KG@135614|Xanthomonadales 135614|Xanthomonadales M zinc metalloprotease rseP - - ko:K11749 ko02024,ko04112,map02024,map04112 - - - ko00000,ko00001,ko01000,ko01002 - - - PDZ,PDZ_2,Peptidase_M50 QTD1_k127_498639_1 697282.Mettu_2893 3.909e-189 617.0 COG4775@1|root,COG4775@2|Bacteria,1MU0D@1224|Proteobacteria,1RMAP@1236|Gammaproteobacteria,1XDRZ@135618|Methylococcales 135618|Methylococcales M Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane bamA - - ko:K07277 - - - - ko00000,ko02000,ko03029 1.B.33 - - Bac_surface_Ag,POTRA QTD1_k127_498639_9 1121405.dsmv_3139 3.979e-05 53.0 COG2825@1|root,COG2825@2|Bacteria,1MZVJ@1224|Proteobacteria,42VH3@68525|delta/epsilon subdivisions,2WP6K@28221|Deltaproteobacteria,2MK60@213118|Desulfobacterales 28221|Deltaproteobacteria M PFAM Outer membrane - - - ko:K06142 - - - - ko00000 - - - OmpH QTD1_k127_498639_4 1123368.AUIS01000001_gene2046 3.792e-96 328.0 COG1044@1|root,COG1044@2|Bacteria,1MUX6@1224|Proteobacteria,1RNYI@1236|Gammaproteobacteria,2NCTI@225057|Acidithiobacillales 225057|Acidithiobacillales M Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell lpxD - 2.3.1.191 ko:K02536 ko00540,ko01100,map00540,map01100 M00060 R04550 RC00039,RC00166 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Hexapep,LpxD QTD1_k127_498639_7 1121035.AUCH01000017_gene2311 2.885e-50 196.0 COG0764@1|root,COG0764@2|Bacteria,1RH2T@1224|Proteobacteria,2VRKQ@28216|Betaproteobacteria,2KWAJ@206389|Rhodocyclales 206389|Rhodocyclales I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs fabZ - 4.2.1.59 ko:K02372 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04428,R04535,R04537,R04544,R04568,R04954,R04965,R07764,R10117,R10121 RC00831,RC01095 ko00000,ko00001,ko00002,ko01000,ko01004 - - - FabA QTD1_k127_498639_5 765910.MARPU_04970 4.69e-95 327.0 COG1043@1|root,COG1043@2|Bacteria,1MUHQ@1224|Proteobacteria,1RPHB@1236|Gammaproteobacteria,1WX0R@135613|Chromatiales 135613|Chromatiales M Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell lpxA - 2.3.1.129 ko:K00677 ko00540,ko01100,ko01503,map00540,map01100,map01503 M00060 R04567 RC00039,RC00055 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Acetyltransf_11,Hexapep QTD1_k127_498639_3 765911.Thivi_2758 5.238e-111 377.0 COG0763@1|root,COG0763@2|Bacteria,1MVBI@1224|Proteobacteria,1RNS1@1236|Gammaproteobacteria,1WY1X@135613|Chromatiales 135613|Chromatiales M Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell lpxB - 2.4.1.182 ko:K00748 ko00540,ko01100,map00540,map01100 M00060 R04606 RC00005,RC00059 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT19 - LpxB QTD1_k127_498639_6 519989.ECTPHS_08553 5.888e-60 214.0 COG0164@1|root,COG0164@2|Bacteria,1RA65@1224|Proteobacteria,1RQ4B@1236|Gammaproteobacteria,1WYG2@135613|Chromatiales 135613|Chromatiales L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids rnhB - 3.1.26.4 ko:K03470 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - RNase_HII QTD1_k127_498639_0 519989.ECTPHS_08558 0.0 1360.0 COG0587@1|root,COG0587@2|Bacteria,1MUIF@1224|Proteobacteria,1RP0K@1236|Gammaproteobacteria,1WVZ3@135613|Chromatiales 135613|Chromatiales L DNA polymerase III alpha subunit - - 2.7.7.7 ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_alpha,HHH_6,Intein_splicing,LAGLIDADG_3,PHP,tRNA_anti-codon QTD1_k127_498639_2 631362.Thi970DRAFT_01916 9.342e-137 442.0 COG0825@1|root,COG0825@2|Bacteria,1MURN@1224|Proteobacteria,1RNN8@1236|Gammaproteobacteria,1WX6T@135613|Chromatiales 135613|Chromatiales I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA accA - 2.1.3.15,6.4.1.2 ko:K01962 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04386 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 - - - ACCA QTD1_k127_499974_4 903818.KI912269_gene308 2.224e-70 265.0 COG4992@1|root,COG4992@2|Bacteria,3Y36P@57723|Acidobacteria 57723|Acidobacteria E PFAM Aminotransferase class-III argD - 2.6.1.11,2.6.1.17 ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00028,M00845 R02283,R04475 RC00006,RC00062 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_3 QTD1_k127_499974_8 1144275.COCOR_02384 6.187e-54 210.0 COG0002@1|root,COG0002@2|Bacteria,1MVJ6@1224|Proteobacteria,42MDN@68525|delta/epsilon subdivisions,2WINX@28221|Deltaproteobacteria 28221|Deltaproteobacteria E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde argC - 1.2.1.38 ko:K00145,ko:K05829 ko00220,ko00300,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01130,map01210,map01230 M00028,M00031,M00763,M00845 R03443,R09777,R10931 RC00684 ko00000,ko00001,ko00002,ko01000 - - - Semialdhyde_dh QTD1_k127_499974_3 483219.LILAB_33475 3.573e-78 291.0 COG0132@1|root,COG0132@2|Bacteria,1MYAE@1224|Proteobacteria 1224|Proteobacteria H Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring - - - - - - - - - - - - DUF1611 QTD1_k127_499974_0 378806.STAUR_5873 9.96e-126 414.0 COG0137@1|root,COG0137@2|Bacteria,1MV0Y@1224|Proteobacteria,42N81@68525|delta/epsilon subdivisions,2WJB0@28221|Deltaproteobacteria,2YUQY@29|Myxococcales 28221|Deltaproteobacteria E Arginosuccinate synthase argG - 6.3.4.5 ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 M00029,M00844,M00845 R01954 RC00380,RC00629 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Arginosuc_synth QTD1_k127_499974_9 1273125.Rrhod_0024 7.376e-21 98.0 COG1438@1|root,COG1438@2|Bacteria,2GKA5@201174|Actinobacteria,4FW9V@85025|Nocardiaceae 201174|Actinobacteria K Regulates arginine biosynthesis genes argR GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - ko:K03402 - - - - ko00000,ko03000 - - - Arg_repressor,Arg_repressor_C QTD1_k127_499974_10 314278.NB231_07797 4.267e-16 82.0 COG2911@1|root,COG2911@2|Bacteria,1MUVD@1224|Proteobacteria,1RMMF@1236|Gammaproteobacteria,1WWU1@135613|Chromatiales 135613|Chromatiales S TamB, inner membrane protein subunit of TAM complex - - - ko:K09800 - - - - ko00000,ko02000 - - - TamB QTD1_k127_499974_2 1049564.TevJSym_an00700 2.493e-79 300.0 COG2911@1|root,COG2911@2|Bacteria,1MUVD@1224|Proteobacteria,1RMMF@1236|Gammaproteobacteria,1J546@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria S protein conserved in bacteria ytfN GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032940,GO:0032991,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0097347 - ko:K09800 - - - - ko00000,ko02000 - - - TamB QTD1_k127_499974_1 1122194.AUHU01000003_gene2232 7.044e-89 317.0 COG0729@1|root,COG0729@2|Bacteria,1MUKM@1224|Proteobacteria,1RNQ3@1236|Gammaproteobacteria,465KK@72275|Alteromonadaceae 1236|Gammaproteobacteria M COG0729 Outer membrane protein ytfM - - ko:K07278 - - - - ko00000,ko02000 1.B.33.2.4 - - Bac_surface_Ag,POTRA,POTRA_TamA_1 QTD1_k127_499974_7 522306.CAP2UW1_2474 2.519e-62 235.0 COG3332@1|root,COG3332@2|Bacteria,1RDBS@1224|Proteobacteria,2VQK6@28216|Betaproteobacteria,1KQTN@119066|unclassified Betaproteobacteria 28216|Betaproteobacteria S Transport and Golgi organisation 2 - - - - - - - - - - - - TANGO2 QTD1_k127_499974_5 335543.Sfum_1412 2.825e-67 239.0 COG2816@1|root,COG2816@2|Bacteria,1QGCX@1224|Proteobacteria,42R10@68525|delta/epsilon subdivisions,2WN3Z@28221|Deltaproteobacteria,2MQIY@213462|Syntrophobacterales 28221|Deltaproteobacteria L NADH pyrophosphatase zinc ribbon domain nudC - 3.6.1.22 ko:K03426 ko00760,ko01100,ko04146,map00760,map01100,map04146 - R00103,R03004,R11104 RC00002 ko00000,ko00001,ko01000 - - - NUDIX,NUDIX-like,zf-NADH-PPase QTD1_k127_499974_6 935567.JAES01000024_gene1444 6.874e-63 220.0 COG1462@1|root,COG1462@2|Bacteria,1QURH@1224|Proteobacteria,1T2IH@1236|Gammaproteobacteria,1X5KV@135614|Xanthomonadales 135614|Xanthomonadales M protein involved in formation of curli polymers - - - - - - - - - - - - CsgG QTD1_k127_5001203_3 196367.JNFG01000011_gene6089 6.233e-60 211.0 COG3552@1|root,COG3552@2|Bacteria,1MUHH@1224|Proteobacteria,2VNH5@28216|Betaproteobacteria,1K1YF@119060|Burkholderiaceae 28216|Betaproteobacteria S VWA domain containing CoxE-like protein - - - - - - - - - - - - VWA_CoxE QTD1_k127_5001203_1 1100721.ALKO01000018_gene1170 7.371e-83 286.0 COG1975@1|root,COG1975@2|Bacteria,1MWFN@1224|Proteobacteria,2VX75@28216|Betaproteobacteria 28216|Betaproteobacteria O XdhC and CoxI family - - - - - - - - - - - - XdhC_C,XdhC_CoxI QTD1_k127_5001203_0 1158292.JPOE01000002_gene2289 3.122e-88 299.0 COG2068@1|root,COG2068@2|Bacteria,1MW0X@1224|Proteobacteria,2VT4G@28216|Betaproteobacteria,1KP7U@119065|unclassified Burkholderiales 28216|Betaproteobacteria S 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase - - 1.1.1.328,2.7.7.76 ko:K07141,ko:K19190 ko00760,ko00790,ko01120,map00760,map00790,map01120 - R10131,R10132,R11582 RC03053 ko00000,ko00001,ko01000 - - - NTP_transf_3 QTD1_k127_5001203_2 1384056.N787_11930 4.251e-62 229.0 COG1975@1|root,COG1975@2|Bacteria,1MXKU@1224|Proteobacteria,1RQRT@1236|Gammaproteobacteria,1X67G@135614|Xanthomonadales 135614|Xanthomonadales O XdhC and CoxI family - - - ko:K07402 - - - - ko00000 - - - XdhC_C,XdhC_CoxI QTD1_k127_5001203_4 765913.ThidrDRAFT_0521 2.44e-46 179.0 COG3907@1|root,COG3907@2|Bacteria,1QV68@1224|Proteobacteria,1TIBV@1236|Gammaproteobacteria,1WW5N@135613|Chromatiales 135613|Chromatiales S PFAM Phosphatidic acid phosphatase type 2 haloperoxidase - - - - - - - - - - - - PAP2 QTD1_k127_501500_18 859657.RPSI07_2943 1.567e-15 81.0 COG0726@1|root,COG0726@2|Bacteria,1PJQG@1224|Proteobacteria,2VIG8@28216|Betaproteobacteria,1K0WC@119060|Burkholderiaceae 28216|Betaproteobacteria G polysaccharide deacetylase - - 3.5.1.41 ko:K01452 ko00520,ko01100,map00520,map01100 - R02333 RC00166,RC00300 ko00000,ko00001,ko01000 - - - Polysacc_deac_1 QTD1_k127_501500_11 666681.M301_2318 1.546e-44 179.0 COG2382@1|root,COG2382@2|Bacteria,1QWH3@1224|Proteobacteria,2WGZS@28216|Betaproteobacteria 28216|Betaproteobacteria P esterase - - - - - - - - - - - - - QTD1_k127_501500_1 365044.Pnap_1374 5.778e-210 685.0 COG4258@1|root,COG4258@2|Bacteria,1MU1E@1224|Proteobacteria,2VHXY@28216|Betaproteobacteria,4AB7F@80864|Comamonadaceae 28216|Betaproteobacteria S exporter - - - - - - - - - - - - MMPL QTD1_k127_501500_12 264198.Reut_B3930 9.382e-43 163.0 COG2834@1|root,COG2834@2|Bacteria,1RHYN@1224|Proteobacteria,2VSXY@28216|Betaproteobacteria,1K2U1@119060|Burkholderiaceae 28216|Betaproteobacteria M Outer membrane lipoprotein carrier protein LolA - - - - - - - - - - - - LolA QTD1_k127_501500_7 264198.Reut_B3931 5.334e-96 328.0 COG4261@1|root,COG4261@2|Bacteria,1MVXJ@1224|Proteobacteria,2VHP0@28216|Betaproteobacteria,1K0GB@119060|Burkholderiaceae 28216|Betaproteobacteria S Bacterial lipid A biosynthesis acyltransferase - - - - - - - - - - - - Lip_A_acyltrans QTD1_k127_501500_17 292.DM42_2309 1.112e-18 99.0 COG0318@1|root,COG0764@1|root,COG0318@2|Bacteria,COG0764@2|Bacteria,1MXPB@1224|Proteobacteria,2VJ3A@28216|Betaproteobacteria,1KH0W@119060|Burkholderiaceae 28216|Betaproteobacteria IQ AMP-binding enzyme - - - - - - - - - - - - AMP-binding,AMP-binding_C,FabA QTD1_k127_501500_4 1163617.SCD_n02766 7.906e-150 490.0 COG0318@1|root,COG0318@2|Bacteria,1MXPB@1224|Proteobacteria,2VJ3A@28216|Betaproteobacteria 28216|Betaproteobacteria IQ Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - - - - - - - - - - AMP-binding,AMP-binding_C,FabA QTD1_k127_501500_16 365046.Rta_02520 8.812e-28 119.0 COG0236@1|root,COG0236@2|Bacteria,1N6RU@1224|Proteobacteria,2VWKA@28216|Betaproteobacteria,4AFE0@80864|Comamonadaceae 28216|Betaproteobacteria IQ Phosphopantetheine attachment site - - - ko:K02078 - - - - ko00000,ko00001 - - - PP-binding QTD1_k127_501500_6 748247.AZKH_1772 1.019e-108 372.0 COG0463@1|root,COG0463@2|Bacteria,1QTWH@1224|Proteobacteria,2VKU3@28216|Betaproteobacteria,2KUT6@206389|Rhodocyclales 206389|Rhodocyclales M Glycosyltransferase like family 2 - - - ko:K00786 - - - - ko00000,ko01000 - - - Glycos_transf_2 QTD1_k127_501500_8 1095769.CAHF01000018_gene842 1.096e-86 299.0 COG0251@1|root,COG0251@2|Bacteria,1NQGP@1224|Proteobacteria,2VMPK@28216|Betaproteobacteria,475TB@75682|Oxalobacteraceae 28216|Betaproteobacteria J pteridine-dependent deoxygenase - - - - - - - - - - - - Ribonuc_L-PSP QTD1_k127_501500_0 991905.SL003B_2026 4.629e-219 695.0 COG4986@1|root,COG4986@2|Bacteria,1MV85@1224|Proteobacteria,2TTRP@28211|Alphaproteobacteria 28211|Alphaproteobacteria P Binding-protein-dependent transport systems inner membrane component - - - ko:K02050 - M00188 - - ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 - - BPD_transp_1 QTD1_k127_501500_2 1380391.JIAS01000018_gene816 6.009e-196 619.0 COG1116@1|root,COG4754@1|root,COG1116@2|Bacteria,COG4754@2|Bacteria,1MUDV@1224|Proteobacteria,2TRXZ@28211|Alphaproteobacteria,2JPN5@204441|Rhodospirillales 204441|Rhodospirillales P C-terminal AAA-associated domain - - - ko:K02049 - M00188 - - ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 - - AAA_assoc_C,ABC_tran QTD1_k127_501500_3 1122604.JONR01000010_gene3881 2.533e-188 599.0 COG3203@1|root,COG3203@2|Bacteria,1R5I5@1224|Proteobacteria,1RM86@1236|Gammaproteobacteria 1236|Gammaproteobacteria M phosphate-selective porin O and P - - - - - - - - - - - - Porin_4,Porin_O_P QTD1_k127_501500_14 62928.azo2383 1.782e-35 141.0 COG4659@1|root,COG4659@2|Bacteria,1RFGW@1224|Proteobacteria,2VTI7@28216|Betaproteobacteria 28216|Betaproteobacteria C PFAM FMN-binding domain protein - - - - - - - - - - - - FMN_bind QTD1_k127_501500_9 1122604.JONR01000010_gene3879 4.043e-83 286.0 COG1477@1|root,COG1477@2|Bacteria,1MW6K@1224|Proteobacteria,1RNMZ@1236|Gammaproteobacteria,1X42D@135614|Xanthomonadales 135614|Xanthomonadales H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein - - 2.7.1.180 ko:K03734 - - - - ko00000,ko01000 - - - ApbE QTD1_k127_501500_13 859657.RPSI07_2738 1.696e-42 161.0 2E4Z6@1|root,32ZSW@2|Bacteria,1N6U2@1224|Proteobacteria,2VW9R@28216|Betaproteobacteria,1KB0H@119060|Burkholderiaceae 28216|Betaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_501500_5 1380394.JADL01000001_gene1961 2.778e-148 489.0 COG1538@1|root,COG1538@2|Bacteria,1MUA8@1224|Proteobacteria,2TT4D@28211|Alphaproteobacteria,2JVGZ@204441|Rhodospirillales 204441|Rhodospirillales MU RND efflux system, outer membrane lipoprotein - - - - - - - - - - - - OEP QTD1_k127_501500_15 1123073.KB899245_gene150 2.435e-34 134.0 COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,1RMBN@1236|Gammaproteobacteria,1X4QK@135614|Xanthomonadales 135614|Xanthomonadales V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - ko:K07789 ko02020,map02020 M00648 - - ko00000,ko00001,ko00002,ko02000 2.A.6.2 - - ACR_tran QTD1_k127_502809_6 1472716.KBK24_0107825 1.107e-42 160.0 COG0179@1|root,COG0179@2|Bacteria,1MVFA@1224|Proteobacteria,2VHG8@28216|Betaproteobacteria,1K027@119060|Burkholderiaceae 28216|Betaproteobacteria Q fumarylacetoacetate (FAA) hydrolase - - 3.7.1.20 ko:K16165 ko00350,ko01100,ko01120,map00350,map01100,map01120 - R01085 RC00326,RC00446 ko00000,ko00001,ko01000 - - - FAA_hydrolase QTD1_k127_502809_3 414684.RC1_2508 2.426e-67 236.0 COG0625@1|root,COG0625@2|Bacteria,1RA4Y@1224|Proteobacteria,2U5B6@28211|Alphaproteobacteria,2JRTT@204441|Rhodospirillales 204441|Rhodospirillales O maleylacetoacetate isomerase maiA - 5.2.1.4 ko:K01801 ko00350,ko01100,ko01120,map00350,map01100,map01120 - R03868 RC00867 ko00000,ko00001,ko01000 - - - GST_C_2,GST_C_3,GST_N,GST_N_3 QTD1_k127_502809_5 1123504.JQKD01000032_gene4502 1.846e-44 171.0 28ME7@1|root,2ZARX@2|Bacteria,1R90X@1224|Proteobacteria,2VNB6@28216|Betaproteobacteria,4AA7V@80864|Comamonadaceae 28216|Betaproteobacteria - - - - - - - - - - - - - - Hemerythrin QTD1_k127_502809_0 1095769.CAHF01000023_gene501 2.807e-154 509.0 COG2203@1|root,COG2203@2|Bacteria,1PP8V@1224|Proteobacteria,2VKHH@28216|Betaproteobacteria 28216|Betaproteobacteria T Domain present in phytochromes and cGMP-specific phosphodiesterases. - - 4.6.1.1 ko:K01768 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000 - - - GAF_2,Putative_PNPOx QTD1_k127_502809_7 497321.C664_06873 2.551e-29 129.0 COG3576@1|root,COG3576@2|Bacteria,1N8Z5@1224|Proteobacteria,2VVVW@28216|Betaproteobacteria,2KX6P@206389|Rhodocyclales 206389|Rhodocyclales S pyridoxamine 5-phosphate - - - - - - - - - - - - - QTD1_k127_502809_4 670292.JH26_17580 7.295e-67 248.0 COG0431@1|root,COG0431@2|Bacteria,1RH7F@1224|Proteobacteria,2VG84@28211|Alphaproteobacteria 28211|Alphaproteobacteria S NAD(P)H-dependent FMN reductase - - - - - - - - - - - - FMN_red QTD1_k127_502809_1 448385.sce1759 3.17e-88 317.0 COG0165@1|root,COG0165@2|Bacteria,1MUTU@1224|Proteobacteria,42M7Y@68525|delta/epsilon subdivisions,2WIRN@28221|Deltaproteobacteria,2YV9Y@29|Myxococcales 28221|Deltaproteobacteria E argininosuccinate lyase argH GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 M00029,M00844,M00845 R01086 RC00445,RC00447 ko00000,ko00001,ko00002,ko01000,ko04147 - - - ASL_C2,Lyase_1,NUDIX QTD1_k127_502809_2 1121920.AUAU01000010_gene44 7.214e-76 267.0 COG0548@1|root,COG0548@2|Bacteria,3Y2IF@57723|Acidobacteria 57723|Acidobacteria E Belongs to the acetylglutamate kinase family. ArgB subfamily argB - 2.7.2.8 ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028 R02649 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase QTD1_k127_502809_8 485918.Cpin_6553 9.793e-19 89.0 COG0078@1|root,COG0078@2|Bacteria,4NEYX@976|Bacteroidetes,1IQ2H@117747|Sphingobacteriia 976|Bacteroidetes E Belongs to the ATCase OTCase family argF GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 ko:K09065,ko:K13043 ko00220,ko01100,ko01230,map00220,map01100,map01230 M00845 R07245,R08937 RC00096 ko00000,ko00001,ko00002,ko01000 - - - OTCace,OTCace_N QTD1_k127_5043673_5 1384054.N790_05335 1.47e-128 421.0 COG2025@1|root,COG2025@2|Bacteria,1MUFI@1224|Proteobacteria,1RMK7@1236|Gammaproteobacteria,1X4RW@135614|Xanthomonadales 135614|Xanthomonadales C Electron transfer flavoprotein etfA - - ko:K03522 - - - - ko00000,ko04147 - - - ETF,ETF_alpha QTD1_k127_5043673_7 1385517.N800_00400 3.197e-103 343.0 COG2086@1|root,COG2086@2|Bacteria,1MVH6@1224|Proteobacteria,1RN6F@1236|Gammaproteobacteria,1X34D@135614|Xanthomonadales 135614|Xanthomonadales C electron transfer flavoprotein beta subunit etfB - - ko:K03521 - - - - ko00000 - - - ETF QTD1_k127_5043673_6 768066.HELO_3847 1.54e-105 351.0 COG0601@1|root,COG0601@2|Bacteria,1MU8Z@1224|Proteobacteria,1RNJ1@1236|Gammaproteobacteria,1XJ29@135619|Oceanospirillales 135619|Oceanospirillales P transporter, permease oppB - - ko:K02033,ko:K15581 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 - - BPD_transp_1 QTD1_k127_5043673_10 598467.BrE312_2195 1.16e-88 301.0 COG1173@1|root,COG1173@2|Bacteria,1MU26@1224|Proteobacteria,1RND6@1236|Gammaproteobacteria 1236|Gammaproteobacteria P COG1173 ABC-type dipeptide oligopeptide nickel transport systems permease components oppC GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00439 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 - iAF1260.b1245,iB21_1397.B21_01229,iEC55989_1330.EC55989_1342,iECBD_1354.ECBD_2377,iECB_1328.ECB_01219,iECDH10B_1368.ECDH10B_1307,iECDH1ME8569_1439.ECDH1ME8569_1185,iECD_1391.ECD_01219,iECIAI1_1343.ECIAI1_1264,iECO103_1326.ECO103_1345,iECO111_1330.ECO111_1572,iECO26_1355.ECO26_1756,iECSE_1348.ECSE_1293,iECSP_1301.ECSP_1637,iECUMN_1333.ECUMN_1542,iECW_1372.ECW_m1337,iECs_1301.ECs1745,iEKO11_1354.EKO11_2607,iETEC_1333.ETEC_1347,iEcDH1_1363.EcDH1_2403,iEcE24377_1341.EcE24377A_1393,iEcHS_1320.EcHS_A1354,iEcolC_1368.EcolC_2383,iG2583_1286.G2583_1517,iJO1366.b1245,iSSON_1240.SSON_1935,iUMNK88_1353.UMNK88_1565,iWFL_1372.ECW_m1337,iY75_1357.Y75_RS06515,iZ_1308.Z2021 BPD_transp_1,OppC_N QTD1_k127_5043673_2 314265.R2601_17524 2.195e-162 533.0 COG1123@1|root,COG4172@2|Bacteria,1MU09@1224|Proteobacteria,2TQP0@28211|Alphaproteobacteria 28211|Alphaproteobacteria P Belongs to the ABC transporter superfamily - - - ko:K02031,ko:K02032 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - ABC_tran,oligo_HPY QTD1_k127_5043673_3 1121015.N789_13295 4.515e-144 479.0 COG0436@1|root,COG0436@2|Bacteria,1MW0Z@1224|Proteobacteria,1RN5B@1236|Gammaproteobacteria,1X32P@135614|Xanthomonadales 135614|Xanthomonadales E aminotransferase - - 2.6.1.2,2.6.1.66 ko:K14260 ko00220,ko00250,ko00290,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00290,map01100,map01110,map01130,map01210,map01230 - R00258,R01215 RC00006,RC00008,RC00036 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 QTD1_k127_5043673_11 228410.NE2178 1.223e-66 256.0 COG3857@1|root,COG3857@2|Bacteria 2|Bacteria L exonuclease activity addB - 3.6.4.12 ko:K16899 - - - - ko00000,ko01000,ko03400 - - - Exonuc_V_gamma,PDDEXK_1,UvrD_C QTD1_k127_5043673_0 1123257.AUFV01000002_gene2641 2.208e-194 646.0 COG1074@1|root,COG1074@2|Bacteria,1MUTF@1224|Proteobacteria,1RPC6@1236|Gammaproteobacteria,1X3M3@135614|Xanthomonadales 135614|Xanthomonadales L A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA recB - 3.1.11.5 ko:K03582 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - PDDEXK_1,UvrD-helicase,UvrD_C QTD1_k127_5043673_21 1195246.AGRI_11837 4.083e-06 57.0 2CBG9@1|root,32RTB@2|Bacteria,1R86M@1224|Proteobacteria,1RNNN@1236|Gammaproteobacteria,466UG@72275|Alteromonadaceae 1236|Gammaproteobacteria S Type II secretion system (T2SS), protein N gspN GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - ko:K02463 ko05111,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - T2SSN QTD1_k127_5043673_22 247634.GPB2148_3076 8.423e-05 52.0 COG3149@1|root,COG3149@2|Bacteria,1PSQ5@1224|Proteobacteria,1SX0C@1236|Gammaproteobacteria,1J77X@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria U Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins - - - ko:K02462 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - T2SSM QTD1_k127_5043673_17 1123261.AXDW01000004_gene2858 4.192e-27 125.0 COG3297@1|root,COG3297@2|Bacteria,1NVVW@1224|Proteobacteria,1S01F@1236|Gammaproteobacteria,1X6HI@135614|Xanthomonadales 135614|Xanthomonadales U GspL periplasmic domain - - - - - - - - - - - - GspL_C,T2SSL QTD1_k127_5043673_14 395493.BegalDRAFT_3088 4.385e-36 151.0 COG3156@1|root,COG3156@2|Bacteria,1RAQM@1224|Proteobacteria,1S2N8@1236|Gammaproteobacteria,460PF@72273|Thiotrichales 72273|Thiotrichales U Type II secretion system (T2SS), protein K - - - ko:K02460 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - T2SSK QTD1_k127_5043673_16 1333856.L686_19370 3.023e-27 126.0 COG4795@1|root,COG4795@2|Bacteria,1RJAE@1224|Proteobacteria,1S5ZZ@1236|Gammaproteobacteria,1Z19U@136846|Pseudomonas stutzeri group 1236|Gammaproteobacteria U General secretion pathway protein J gspJ GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0098776 - ko:K02459 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - N_methyl,T2SSJ QTD1_k127_5043673_19 1215092.PA6_027_01240 4.766e-18 96.0 COG2165@1|root,COG2165@2|Bacteria,1N737@1224|Proteobacteria,1SC8X@1236|Gammaproteobacteria,1YGG7@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria NU general secretion pathway protein gspI GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - ko:K02458 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - N_methyl,T2SSI QTD1_k127_5043673_20 301.JNHE01000003_gene1809 1.185e-16 90.0 COG2165@1|root,COG2165@2|Bacteria,1PSYJ@1224|Proteobacteria,1TBK5@1236|Gammaproteobacteria,1YHZ3@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria NU Type II transport protein GspH - - - - - - - - - - - - GspH,N_methyl QTD1_k127_5043673_13 1323663.AROI01000016_gene422 1.36e-46 173.0 COG2165@1|root,COG2165@2|Bacteria,1RDX2@1224|Proteobacteria,1S3VS@1236|Gammaproteobacteria 1236|Gammaproteobacteria U General Secretion Pathway protein - - - ko:K02456 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - N_methyl,T2SSG QTD1_k127_5043673_18 1049564.TevJSym_as00760 1e-25 114.0 COG0705@1|root,COG0705@2|Bacteria,1N8NS@1224|Proteobacteria,1SD4M@1236|Gammaproteobacteria,1J76C@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria S Rhomboid family - - - - - - - - - - - - Rhomboid QTD1_k127_5043673_8 396588.Tgr7_1836 1.454e-102 343.0 COG0331@1|root,COG0331@2|Bacteria,1MV6N@1224|Proteobacteria,1RNH3@1236|Gammaproteobacteria,1WWNS@135613|Chromatiales 135613|Chromatiales I TIGRFAM malonyl CoA-acyl carrier protein transacylase - - 2.3.1.39 ko:K00645 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 M00082 R01626,R11671 RC00004,RC00039,RC02727 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Acyl_transf_1 QTD1_k127_5043673_9 243233.MCA2001 5.69e-90 304.0 COG1028@1|root,COG1028@2|Bacteria,1MU6X@1224|Proteobacteria,1RMBB@1236|Gammaproteobacteria,1XDSR@135618|Methylococcales 135618|Methylococcales IQ 3-oxoacyl-(Acyl-carrier-protein) reductase - - 1.1.1.100 ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short_C2 QTD1_k127_5043673_15 157783.LK03_20910 1.014e-29 119.0 COG0236@1|root,COG0236@2|Bacteria,1MZ4P@1224|Proteobacteria,1S8X4@1236|Gammaproteobacteria 1236|Gammaproteobacteria IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis acpP GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0050896,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - ko:K02078 - - - - ko00000,ko00001 - - - PP-binding QTD1_k127_5043673_1 1207076.ALAT01000160_gene3271 3.841e-170 548.0 COG0304@1|root,COG0304@2|Bacteria,1MU1X@1224|Proteobacteria,1RMDE@1236|Gammaproteobacteria,1Z0J8@136846|Pseudomonas stutzeri group 1236|Gammaproteobacteria I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP fabF GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033817,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.179 ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119 RC00039,RC02728,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - iAF1260.b1095,iAPECO1_1312.APECO1_176,iB21_1397.B21_01099,iBWG_1329.BWG_0943,iE2348C_1286.E2348C_1187,iEC042_1314.EC042_1165,iEC55989_1330.EC55989_1207,iECABU_c1320.ECABU_c13085,iECBD_1354.ECBD_2506,iECB_1328.ECB_01091,iECDH10B_1368.ECDH10B_1167,iECDH1ME8569_1439.ECDH1ME8569_1030,iECD_1391.ECD_01091,iECED1_1282.ECED1_1238,iECH74115_1262.ECH74115_1474,iECIAI1_1343.ECIAI1_1130,iECIAI39_1322.ECIAI39_2066,iECO103_1326.ECO103_1140,iECO111_1330.ECO111_1372,iECO26_1355.ECO26_1428,iECOK1_1307.ECOK1_1202,iECP_1309.ECP_1087,iECS88_1305.ECS88_1109,iECSE_1348.ECSE_1159,iECSF_1327.ECSF_0994,iECSP_1301.ECSP_1396,iECUMN_1333.ECUMN_1270,iECW_1372.ECW_m1203,iECs_1301.ECs1473,iEKO11_1354.EKO11_2739,iETEC_1333.ETEC_1160,iEcDH1_1363.EcDH1_2552,iEcE24377_1341.EcE24377A_1216,iEcSMS35_1347.EcSMS35_2032,iG2583_1286.G2583_1355,iJO1366.b1095,iJR904.b1095,iLF82_1304.LF82_0607,iNRG857_1313.NRG857_05280,iSF_1195.SF1099,iSFxv_1172.SFxv_1251,iS_1188.S1179,iUMN146_1321.UM146_11850,iWFL_1372.ECW_m1203,iY75_1357.Y75_RS05720,iZ_1308.Z1734,ic_1306.c1365 Ketoacyl-synt_C,ketoacyl-synt QTD1_k127_5043673_4 1384054.N790_01610 4.743e-133 439.0 COG0147@1|root,COG0147@2|Bacteria,1MVBJ@1224|Proteobacteria,1RMSE@1236|Gammaproteobacteria,1X55Q@135614|Xanthomonadales 135614|Xanthomonadales EH component I pabB - 4.1.3.27 ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 M00023 R00985,R00986 RC00010,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 - - - Anth_synt_I_N,Chorismate_bind QTD1_k127_5043673_12 322710.Avin_14950 3.547e-64 231.0 COG0115@1|root,COG0115@2|Bacteria,1MZAK@1224|Proteobacteria,1RPPG@1236|Gammaproteobacteria 1236|Gammaproteobacteria EH 4-amino-4-deoxychorismate lyase pabC GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008696,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0019842,GO:0030170,GO:0034641,GO:0036094,GO:0042558,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0070279,GO:0071704,GO:0097159,GO:1901360,GO:1901363,GO:1901564 4.1.3.38 ko:K02619 ko00790,map00790 - R05553 RC01843,RC02148 ko00000,ko00001,ko01000 - - iAPECO1_1312.APECO1_177,iE2348C_1286.E2348C_1188,iECED1_1282.ECED1_1239,iECNA114_1301.ECNA114_1153,iECOK1_1307.ECOK1_1203,iECS88_1305.ECS88_1110,iECSF_1327.ECSF_0995,iECUMN_1333.ECUMN_1273,iJN746.PP_1917,iPC815.YPO1603,iUMN146_1321.UM146_11845,iUTI89_1310.UTI89_C1222,ic_1306.c1366 Aminotran_4 QTD1_k127_5058243_7 555079.Toce_1821 4.037e-13 81.0 COG0477@1|root,COG2814@2|Bacteria,1TPPY@1239|Firmicutes,247T9@186801|Clostridia,42JGP@68295|Thermoanaerobacterales 186801|Clostridia EGP Major Facilitator Superfamily - - - - - - - - - - - - MFS_1,Sugar_tr QTD1_k127_5058243_4 1231190.NA8A_05353 2.345e-50 194.0 COG1018@1|root,COG1018@2|Bacteria,1MY2Q@1224|Proteobacteria,2U0WY@28211|Alphaproteobacteria,43J7K@69277|Phyllobacteriaceae 28211|Alphaproteobacteria C Oxidoreductase FAD-binding domain paaE - - ko:K02613 ko00360,ko01120,map00360,map01120 - R09838 RC02690 ko00000,ko00001 - - - FAD_binding_6,Fer2,NAD_binding_1 QTD1_k127_5058243_5 1030157.AFMP01000064_gene2201 1.955e-46 174.0 COG2151@1|root,COG2151@2|Bacteria,1RF3S@1224|Proteobacteria,2TRQW@28211|Alphaproteobacteria,2K4PD@204457|Sphingomonadales 204457|Sphingomonadales L Iron-sulfur cluster assembly protein - - - ko:K02612 ko00360,ko01120,map00360,map01120 - R09838 RC02690 ko00000,ko00001 - - - FeS_assembly_P QTD1_k127_5058243_2 1411123.JQNH01000001_gene1832 4.587e-84 286.0 COG3396@1|root,COG3396@2|Bacteria,1MVYQ@1224|Proteobacteria,2TRYF@28211|Alphaproteobacteria 28211|Alphaproteobacteria S phenylacetic acid degradation protein paaC - 1.14.13.149 ko:K02611 ko00360,ko01120,map00360,map01120 - R09838 RC02690 ko00000,ko00001,ko01000 - - - PaaA_PaaC QTD1_k127_5058243_6 257310.BB3434 1.505e-40 154.0 COG3460@1|root,COG3460@2|Bacteria,1RHM5@1224|Proteobacteria,2VST3@28216|Betaproteobacteria,3T7MV@506|Alcaligenaceae 28216|Betaproteobacteria Q Phenylacetic acid degradation B paaB - - ko:K02610 ko00360,ko01120,map00360,map01120 - R09838 RC02690 ko00000,ko00001 - - - PaaB QTD1_k127_5058243_1 1411123.JQNH01000001_gene1830 3.388e-161 515.0 COG3396@1|root,COG3396@2|Bacteria,1MVQ7@1224|Proteobacteria,2TTC4@28211|Alphaproteobacteria 28211|Alphaproteobacteria S Phenylacetate-CoA oxygenase paaA - 1.14.13.149 ko:K02609 ko00360,ko01120,map00360,map01120 - R09838 RC02690 ko00000,ko00001,ko01000 - - - PaaA_PaaC QTD1_k127_5058243_3 1049564.TevJSym_ab00470 1.293e-68 258.0 2A6A4@1|root,30V2R@2|Bacteria,1RENE@1224|Proteobacteria,1SNHE@1236|Gammaproteobacteria,1JA5P@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_5058243_0 1144342.PMI40_04153 1.491e-168 535.0 COG1541@1|root,COG1541@2|Bacteria,1MV1W@1224|Proteobacteria,2VI46@28216|Betaproteobacteria,473ED@75682|Oxalobacteraceae 28216|Betaproteobacteria H Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) paaK - 6.2.1.30 ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 - R02539 RC00004,RC00014 ko00000,ko00001,ko01000 - - - AMP-binding,AMP-binding_C_2 QTD1_k127_5130052_6 1123073.KB899242_gene1115 3.954e-09 62.0 COG3203@1|root,COG3203@2|Bacteria,1NHZ5@1224|Proteobacteria,1SJXE@1236|Gammaproteobacteria,1X9R5@135614|Xanthomonadales 135614|Xanthomonadales M Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - - - - - - - - - - Porin_4 QTD1_k127_5130052_5 1266908.AQPB01000021_gene2283 1.212e-23 104.0 COG2005@1|root,COG2005@2|Bacteria,1P9SX@1224|Proteobacteria,1RMES@1236|Gammaproteobacteria 1236|Gammaproteobacteria H Transcriptional regulator modE - - ko:K02019 - - - - ko00000,ko03000 - - - HTH_1 QTD1_k127_5130052_2 396588.Tgr7_1152 1.042e-117 389.0 COG2171@1|root,COG2171@2|Bacteria,1MU0Y@1224|Proteobacteria,1RPCS@1236|Gammaproteobacteria,1WVX8@135613|Chromatiales 135613|Chromatiales E Belongs to the transferase hexapeptide repeat family dapD - 2.3.1.117 ko:K00674 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 M00016 R04365 RC00004,RC01136 ko00000,ko00001,ko00002,ko01000 - - - Hexapep,Hexapep_2,THDPS_N_2 QTD1_k127_5130052_0 187272.Mlg_1865 3.701e-293 934.0 COG2844@1|root,COG2844@2|Bacteria,1MV54@1224|Proteobacteria,1RN5T@1236|Gammaproteobacteria,1WWDB@135613|Chromatiales 135613|Chromatiales O Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen glnD - 2.7.7.59 ko:K00990 ko02020,map02020 - - - ko00000,ko00001,ko01000 - - - ACT,DUF294,GlnD_UR_UTase,HD,NTP_transf_2 QTD1_k127_5130052_1 713586.KB900536_gene142 1.658e-124 406.0 COG0024@1|root,COG0024@2|Bacteria,1MU99@1224|Proteobacteria,1RMHN@1236|Gammaproteobacteria,1WX9V@135613|Chromatiales 135613|Chromatiales E TIGRFAM methionine aminopeptidase, type I map - 3.4.11.18 ko:K01265 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M24 QTD1_k127_5130052_3 765914.ThisiDRAFT_1080 2.084e-95 340.0 COG0052@1|root,COG0052@2|Bacteria,1MU33@1224|Proteobacteria,1RN0Z@1236|Gammaproteobacteria,1WW47@135613|Chromatiales 135613|Chromatiales J Belongs to the universal ribosomal protein uS2 family rpsB - - ko:K02967 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S2 QTD1_k127_5130052_4 1163409.UUA_13670 1.304e-41 160.0 COG0052@1|root,COG0052@2|Bacteria,1MU33@1224|Proteobacteria,1RN0Z@1236|Gammaproteobacteria,1X2XU@135614|Xanthomonadales 135614|Xanthomonadales J Belongs to the universal ribosomal protein uS2 family rpsB GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02967 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S2 QTD1_k127_514697_2 1349767.GJA_4950 5.731e-266 827.0 COG0480@1|root,COG0480@2|Bacteria,1MUCV@1224|Proteobacteria,2VI3Q@28216|Betaproteobacteria,4734N@75682|Oxalobacteraceae 28216|Betaproteobacteria J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome fusA - - ko:K02355 - - - - ko00000,ko03012,ko03029 - - - EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2 QTD1_k127_514697_8 1304275.C41B8_18094 1.502e-65 227.0 COG0049@1|root,COG0049@2|Bacteria,1MXC8@1224|Proteobacteria,1RN77@1236|Gammaproteobacteria 1236|Gammaproteobacteria J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA rpsG GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016043,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 - ko:K02992 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S7 QTD1_k127_514697_10 1279017.AQYJ01000013_gene2983 2.028e-64 223.0 COG0048@1|root,COG0048@2|Bacteria,1RCWY@1224|Proteobacteria,1S3WB@1236|Gammaproteobacteria,466U5@72275|Alteromonadaceae 1236|Gammaproteobacteria J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit rpsL GO:0000372,GO:0000375,GO:0000376,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0015935,GO:0016070,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0031323,GO:0031325,GO:0032991,GO:0033120,GO:0034336,GO:0034337,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043484,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990145,GO:1990904 - ko:K02950 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosom_S12_S23 QTD1_k127_514697_16 1234364.AMSF01000016_gene1740 1.025e-37 161.0 COG2199@1|root,COG3706@2|Bacteria,1MWHH@1224|Proteobacteria,1RRU7@1236|Gammaproteobacteria,1XCCT@135614|Xanthomonadales 135614|Xanthomonadales T 7TM diverse intracellular signalling - - - - - - - - - - - - 7TMR-DISM_7TM,GGDEF QTD1_k127_514697_20 1210884.HG799463_gene9611 8.32e-13 76.0 COG0454@1|root,COG0456@2|Bacteria,2J1HM@203682|Planctomycetes 203682|Planctomycetes K Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_1 QTD1_k127_514697_15 1535422.ND16A_2265 2.02e-39 160.0 COG4798@1|root,COG4798@2|Bacteria,1RHGZ@1224|Proteobacteria,1S2WK@1236|Gammaproteobacteria,2Q6UK@267889|Colwelliaceae 1236|Gammaproteobacteria S Methyl-transferase - - - - - - - - - - - - Methyltransf_11,PCMT,Ubie_methyltran QTD1_k127_514697_13 450851.PHZ_c3035 9.647e-51 188.0 COG5579@1|root,COG5579@2|Bacteria,1RGXV@1224|Proteobacteria,2U9EH@28211|Alphaproteobacteria,2KIZV@204458|Caulobacterales 204458|Caulobacterales S Protein of unknown function (DUF1810) - - - - - - - - - - - - DUF1810 QTD1_k127_514697_12 1449049.JONW01000009_gene4619 4.123e-61 220.0 COG4798@1|root,COG4798@2|Bacteria,1RHGZ@1224|Proteobacteria,2U7R8@28211|Alphaproteobacteria,2KJUA@204458|Caulobacterales 204458|Caulobacterales S Methyltransferase - - - - - - - - - - - - - QTD1_k127_514697_3 1122604.JONR01000034_gene405 1.917e-184 595.0 COG0265@1|root,COG0265@2|Bacteria,1PI1V@1224|Proteobacteria,1S3H8@1236|Gammaproteobacteria 1236|Gammaproteobacteria O Trypsin-like peptidase domain - - - - - - - - - - - - PDZ_2,SidE,Trypsin_2 QTD1_k127_514697_6 240015.ACP_3350 6.684e-76 263.0 COG1670@1|root,COG1670@2|Bacteria,3Y5A7@57723|Acidobacteria,2JJQS@204432|Acidobacteriia 204432|Acidobacteriia J Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_3 QTD1_k127_514697_17 1123073.KB899241_gene2534 3.766e-26 115.0 2B2WH@1|root,31VH2@2|Bacteria,1QCMM@1224|Proteobacteria,1T8D0@1236|Gammaproteobacteria,1XAGE@135614|Xanthomonadales 135614|Xanthomonadales - - - - - - - - - - - - - - - QTD1_k127_514697_9 1191460.F959_02661 3.673e-65 225.0 COG2050@1|root,COG2050@2|Bacteria,1RHAN@1224|Proteobacteria,1S79C@1236|Gammaproteobacteria,3NKE3@468|Moraxellaceae 1236|Gammaproteobacteria Q Domain of unknown function (DUF4442) - - - - - - - - - - - - DUF4442 QTD1_k127_514697_0 472759.Nhal_2379 0.0 2137.0 COG0086@1|root,COG0086@2|Bacteria,1MU3M@1224|Proteobacteria,1RPYH@1236|Gammaproteobacteria,1WVVI@135613|Chromatiales 135613|Chromatiales K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates rpoC - 2.7.7.6 ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 - - - RNA_pol_Rpb1_1,RNA_pol_Rpb1_2,RNA_pol_Rpb1_3,RNA_pol_Rpb1_4,RNA_pol_Rpb1_5 QTD1_k127_514697_1 1249627.D779_3352 0.0 2126.0 COG0085@1|root,COG0085@2|Bacteria,1MUC4@1224|Proteobacteria,1RMK0@1236|Gammaproteobacteria,1WX4P@135613|Chromatiales 135613|Chromatiales K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates rpoB - 2.7.7.6 ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 - - - RNA_pol_Rpb2_1,RNA_pol_Rpb2_2,RNA_pol_Rpb2_3,RNA_pol_Rpb2_45,RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 QTD1_k127_514697_14 477184.KYC_00771 4.473e-41 155.0 COG0222@1|root,COG0222@2|Bacteria,1RGU4@1224|Proteobacteria,2VSG7@28216|Betaproteobacteria,3T44Z@506|Alcaligenaceae 28216|Betaproteobacteria J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation rplL - - ko:K02935 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L12,Ribosomal_L12_N QTD1_k127_514697_11 396588.Tgr7_2333 5.49e-62 217.0 COG0244@1|root,COG0244@2|Bacteria,1RAN5@1224|Proteobacteria,1S286@1236|Gammaproteobacteria,1WXDE@135613|Chromatiales 135613|Chromatiales J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors rplJ - - ko:K02864 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L10 QTD1_k127_514697_4 396588.Tgr7_2334 2.017e-99 331.0 COG0081@1|root,COG0081@2|Bacteria,1MUE6@1224|Proteobacteria,1RMDW@1236|Gammaproteobacteria,1WW17@135613|Chromatiales 135613|Chromatiales J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release rplA - - ko:K02863 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L1 QTD1_k127_514697_7 1158146.KB907137_gene4 3.077e-70 239.0 COG0080@1|root,COG0080@2|Bacteria,1RA2M@1224|Proteobacteria,1S22R@1236|Gammaproteobacteria,1WXZD@135613|Chromatiales 135613|Chromatiales J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors rplK - - ko:K02867 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L11,Ribosomal_L11_N QTD1_k127_514697_5 396588.Tgr7_2336 5.478e-86 293.0 COG0250@1|root,COG0250@2|Bacteria,1MU14@1224|Proteobacteria,1RMW0@1236|Gammaproteobacteria,1WWG3@135613|Chromatiales 135613|Chromatiales K Participates in transcription elongation, termination and antitermination nusG - - ko:K02601 - - - - ko00000,ko03009,ko03021 - - - KOW,NusG QTD1_k127_514697_18 1123393.KB891319_gene708 7.235e-21 97.0 COG0690@1|root,COG0690@2|Bacteria,1RDI9@1224|Proteobacteria,2VUPV@28216|Betaproteobacteria,1KT84@119069|Hydrogenophilales 119069|Hydrogenophilales U SecE/Sec61-gamma subunits of protein translocation complex - - - ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 - - SecE QTD1_k127_514697_21 1122169.AREN01000056_gene2019 1.676e-06 54.0 COG0690@1|root,COG0690@2|Bacteria,1RDI9@1224|Proteobacteria,1S3PA@1236|Gammaproteobacteria,1JECV@118969|Legionellales 118969|Legionellales U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation secE - - ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 - - SecE QTD1_k127_514697_19 1278971.AOGF01000007_gene74 6.903e-18 83.0 COG0050@1|root,COG0050@2|Bacteria,1MVC0@1224|Proteobacteria,1RMYX@1236|Gammaproteobacteria,1Y73N@135625|Pasteurellales 135625|Pasteurellales J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis tuf - - ko:K02358 - - - - ko00000,ko03012,ko03029,ko04147 - - - GTP_EFTU,GTP_EFTU_D2,GTP_EFTU_D3 QTD1_k127_5152537_2 1499686.BN1079_03212 3.746e-116 383.0 COG0042@1|root,COG0042@2|Bacteria,1MV5V@1224|Proteobacteria,1RMJP@1236|Gammaproteobacteria 1236|Gammaproteobacteria J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines dusB GO:0002943,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016491,GO:0016627,GO:0017150,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050896,GO:0055114,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 - ko:K05540 - - - - ko00000,ko01000,ko03016 - - - Dus QTD1_k127_5152537_4 1392540.P256_00875 4.472e-21 96.0 COG2901@1|root,COG2901@2|Bacteria,1N7MJ@1224|Proteobacteria,1SD35@1236|Gammaproteobacteria,3NNW8@468|Moraxellaceae 1236|Gammaproteobacteria KL Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters fis GO:0000018,GO:0000229,GO:0000785,GO:0000786,GO:0000787,GO:0000789,GO:0000976,GO:0000984,GO:0000985,GO:0001017,GO:0001046,GO:0001047,GO:0001067,GO:0001121,GO:0001130,GO:0001131,GO:0001140,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008301,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016032,GO:0016070,GO:0018130,GO:0019042,GO:0019045,GO:0019046,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031421,GO:0032359,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044374,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044444,GO:0044446,GO:0044464,GO:0044815,GO:0045892,GO:0045893,GO:0045911,GO:0045934,GO:0045935,GO:0046483,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051704,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - ko:K03557 ko05111,map05111 - - - ko00000,ko00001,ko03000,ko03036,ko03400 - - - HTH_8 QTD1_k127_5152537_0 396588.Tgr7_0361 6.674e-212 670.0 COG0138@1|root,COG0138@2|Bacteria,1MUDQ@1224|Proteobacteria,1RMWS@1236|Gammaproteobacteria,1WWGN@135613|Chromatiales 135613|Chromatiales F Bifunctional purine biosynthesis protein PurH purH - 2.1.2.3,3.5.4.10 ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 M00048 R01127,R04560 RC00026,RC00263,RC00456 ko00000,ko00001,ko00002,ko01000,ko04147 - - - AICARFT_IMPCHas,MGS QTD1_k127_5152537_1 717772.THIAE_08120 2.207e-162 521.0 COG0151@1|root,COG0151@2|Bacteria,1MUAH@1224|Proteobacteria,1RNS4@1236|Gammaproteobacteria,4601Y@72273|Thiotrichales 72273|Thiotrichales F Belongs to the GARS family purD - 6.3.2.6,6.3.4.13 ko:K01945,ko:K13713 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04144,R04591 RC00064,RC00090,RC00162,RC00166 ko00000,ko00001,ko00002,ko01000 - - - GARS_A,GARS_C,GARS_N,SAICAR_synt QTD1_k127_5152537_3 985054.JQEZ01000003_gene1553 2.16e-35 145.0 COG0824@1|root,COG0824@2|Bacteria,1RI3X@1224|Proteobacteria,2UC1Z@28211|Alphaproteobacteria 28211|Alphaproteobacteria S Thioesterase superfamily - - - ko:K07107 - - - - ko00000,ko01000 - - - 4HBT,4HBT_2,Acyl-ACP_TE QTD1_k127_5174822_1 1260251.SPISAL_05235 9.702e-45 165.0 COG1806@1|root,COG1806@2|Bacteria,1MUHU@1224|Proteobacteria,1RPHX@1236|Gammaproteobacteria,1WXIR@135613|Chromatiales 135613|Chromatiales S Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation - - 2.7.11.33,2.7.4.28 ko:K09773 - - - - ko00000,ko01000 - - - Kinase-PPPase QTD1_k127_5174822_2 396588.Tgr7_1485 7.116e-23 110.0 COG3151@1|root,COG3151@2|Bacteria,1NAPI@1224|Proteobacteria,1SEY8@1236|Gammaproteobacteria,1WYT2@135613|Chromatiales 135613|Chromatiales S Protein of unknown function (DUF1249) - - - ko:K09920 - - - - ko00000 - - - DUF1249 QTD1_k127_5174822_0 1336245.JAGO01000010_gene743 1.222e-125 417.0 COG0793@1|root,COG0793@2|Bacteria,1MU39@1224|Proteobacteria,1RMSR@1236|Gammaproteobacteria,1XHXE@135619|Oceanospirillales 135619|Oceanospirillales M Belongs to the peptidase S41A family prc - 3.4.21.102 ko:K03797 - - - - ko00000,ko01000,ko01002 - - - DUF3340,PDZ,Peptidase_S41 QTD1_k127_5176466_7 876044.IMCC3088_1574 2.389e-92 309.0 COG0442@1|root,COG0442@2|Bacteria,1MU7E@1224|Proteobacteria,1RN5R@1236|Gammaproteobacteria,1J4UV@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS proS GO:0002161,GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0043906,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 ko:K01881 ko00970,map00970 M00359,M00360 R03661 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - iUTI89_1310.UTI89_C0210 HGTP_anticodon,tRNA-synt_2b,tRNA_edit QTD1_k127_5176466_12 349521.HCH_04774 6.598e-41 164.0 COG0741@1|root,COG0741@2|Bacteria,1R666@1224|Proteobacteria,1S3XT@1236|Gammaproteobacteria,1XJJU@135619|Oceanospirillales 135619|Oceanospirillales M Transglycosylase SLT domain - - - - - - - - - - - - SLT QTD1_k127_5176466_1 1090319.KE386571_gene2491 2.901e-182 590.0 COG0405@1|root,COG0405@2|Bacteria,1MUV6@1224|Proteobacteria,2TR49@28211|Alphaproteobacteria,2K0PZ@204457|Sphingomonadales 204457|Sphingomonadales E gamma-glutamyltranspeptidase - - 2.3.2.2,3.4.19.13 ko:K00681 ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100 - R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935 RC00064,RC00090,RC00096 ko00000,ko00001,ko01000,ko01002 - - - G_glu_transpept QTD1_k127_5176466_14 1158292.JPOE01000005_gene420 1.048e-18 89.0 COG1254@1|root,COG1254@2|Bacteria 2|Bacteria C Belongs to the acylphosphatase family acyP GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 - R00317,R01421,R01515 RC00043 ko00000,ko00001,ko01000 - - - Acylphosphatase QTD1_k127_5176466_8 396588.Tgr7_2247 1.154e-76 262.0 COG0655@1|root,COG0655@2|Bacteria,1MW7N@1224|Proteobacteria,1S23B@1236|Gammaproteobacteria,1WW1Q@135613|Chromatiales 135613|Chromatiales S Belongs to the WrbA family - - 1.6.5.2 ko:K03809 ko00130,ko01110,map00130,map01110 - R02964,R03643,R03816 RC00819 ko00000,ko00001,ko01000 - - - FMN_red QTD1_k127_5176466_10 1218352.B597_007880 1.848e-47 181.0 COG0593@1|root,COG0593@2|Bacteria,1MVW6@1224|Proteobacteria,1RPJP@1236|Gammaproteobacteria,1Z0AS@136846|Pseudomonas stutzeri group 1236|Gammaproteobacteria L Belongs to the DnaA family. HdA subfamily hda GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008156,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030174,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:2000104,GO:2000112,GO:2000113 - ko:K10763 - - - - ko00000,ko03032 - - - Bac_DnaA QTD1_k127_5176466_13 243233.MCA0372 1.626e-38 156.0 COG0558@1|root,COG0558@2|Bacteria,1MZ8B@1224|Proteobacteria,1SAHT@1236|Gammaproteobacteria,1XGEW@135618|Methylococcales 135618|Methylococcales I CDP-alcohol phosphatidyltransferase - - 2.7.8.41 ko:K08744 ko00564,ko01100,map00564,map01100 - R02030 RC00002,RC00017 ko00000,ko00001,ko01000 - - - CDP-OH_P_transf QTD1_k127_5176466_3 1121921.KB898711_gene2080 2.402e-142 460.0 COG0150@1|root,COG0150@2|Bacteria,1MURG@1224|Proteobacteria,1RNZZ@1236|Gammaproteobacteria,2PMV3@256005|Alteromonadales genera incertae sedis 1236|Gammaproteobacteria F AIR synthase related protein, N-terminal domain purM GO:0003674,GO:0003824,GO:0004641,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.1 ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04208 RC01100 ko00000,ko00001,ko00002,ko01000 - - iECSF_1327.ECSF_2340 AIRS,AIRS_C QTD1_k127_5176466_9 2342.SOPEG_3024 8.266e-62 222.0 COG0299@1|root,COG0299@2|Bacteria,1MWN1@1224|Proteobacteria,1RMHS@1236|Gammaproteobacteria 1236|Gammaproteobacteria F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate purN GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 2.1.2.2 ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 M00048 R04325,R04326 RC00026,RC00197,RC01128 ko00000,ko00001,ko00002,ko01000 - - iAF1260.b2500,iBWG_1329.BWG_2264,iECDH10B_1368.ECDH10B_2666,iECDH1ME8569_1439.ECDH1ME8569_2426,iEcDH1_1363.EcDH1_1169,iJO1366.b2500,iJR904.b2500,iY75_1357.Y75_RS13050 Formyl_trans_N QTD1_k127_5176466_15 1278309.KB907101_gene559 8.561e-13 80.0 COG3170@1|root,COG3170@2|Bacteria,1RDXQ@1224|Proteobacteria,1T42I@1236|Gammaproteobacteria,1XRW6@135619|Oceanospirillales 135619|Oceanospirillales NU Protein of unknown function (DUF3108) - - - - - - - - - - - - DUF3108 QTD1_k127_5176466_6 1380391.JIAS01000001_gene2800 1.712e-116 404.0 COG0717@1|root,COG0717@2|Bacteria,1MVDH@1224|Proteobacteria,2TR5U@28211|Alphaproteobacteria,2JQI3@204441|Rhodospirillales 204441|Rhodospirillales F 2'-deoxycytidine 5'-triphosphate deaminase (DCD) - - 3.5.4.13 ko:K01494 ko00240,ko01100,map00240,map01100 M00053 R00568,R02325 RC00074 ko00000,ko00001,ko00002,ko01000 - - - DCD QTD1_k127_5176466_5 1121035.AUCH01000005_gene139 5.047e-129 422.0 COG0489@1|root,COG0489@2|Bacteria,1MU7R@1224|Proteobacteria,2VIMV@28216|Betaproteobacteria,2KV2W@206389|Rhodocyclales 206389|Rhodocyclales D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP mrp - - ko:K03593 - - - - ko00000,ko03029,ko03036 - - - FeS_assembly_P,ParA QTD1_k127_5176466_0 519989.ECTPHS_06807 1.847e-205 667.0 COG0515@1|root,COG0515@2|Bacteria,1MV1P@1224|Proteobacteria,1RR36@1236|Gammaproteobacteria,1WYS8@135613|Chromatiales 135613|Chromatiales KLT serine threonine protein kinase - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - HAMP,HEAT_2,Pkinase,sCache_3_2 QTD1_k127_5176466_2 713586.KB900536_gene2578 1.512e-162 519.0 COG2805@1|root,COG2805@2|Bacteria,1MU3J@1224|Proteobacteria,1RN8G@1236|Gammaproteobacteria,1WWZV@135613|Chromatiales 135613|Chromatiales NU PFAM Type II secretion system protein E - - - - - - - - - - - - T2SSE QTD1_k127_5176466_4 713586.KB900536_gene2579 4.316e-142 460.0 COG2805@1|root,COG2805@2|Bacteria,1MU3J@1224|Proteobacteria,1RN8G@1236|Gammaproteobacteria,1WWZV@135613|Chromatiales 135613|Chromatiales NU PFAM Type II secretion system protein E - - - ko:K02669 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - T2SSE QTD1_k127_5176466_11 1123487.KB892844_gene854 5.913e-47 169.0 COG0073@1|root,COG0143@1|root,COG0073@2|Bacteria,COG0143@2|Bacteria,1MUBY@1224|Proteobacteria,2VH19@28216|Betaproteobacteria,2KUGX@206389|Rhodocyclales 206389|Rhodocyclales J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation metG - 6.1.1.10 ko:K01874 ko00450,ko00970,map00450,map00970 M00359,M00360 R03659,R04773 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,tRNA-synt_1g,tRNA_bind QTD1_k127_521646_9 935567.JAES01000024_gene1470 0.0003226 51.0 COG3637@1|root,COG3637@2|Bacteria,1N7AR@1224|Proteobacteria,1SHEZ@1236|Gammaproteobacteria,1X5E1@135614|Xanthomonadales 135614|Xanthomonadales M Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - - - - - - - - - - - QTD1_k127_521646_5 626887.J057_13406 3.962e-47 175.0 COG3791@1|root,COG3791@2|Bacteria,1RHWZ@1224|Proteobacteria,1SAN9@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Glutathione-dependent formaldehyde-activating enzyme - - - - - - - - - - - - GFA QTD1_k127_521646_0 187272.Mlg_0367 1.009e-227 716.0 COG1158@1|root,COG1158@2|Bacteria,1MUCF@1224|Proteobacteria,1RP95@1236|Gammaproteobacteria,1WW22@135613|Chromatiales 135613|Chromatiales K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template rho - - ko:K03628 ko03018,map03018 - - - ko00000,ko00001,ko03019,ko03021 - - - ATP-synt_ab,Rho_N,Rho_RNA_bind QTD1_k127_521646_4 396588.Tgr7_0357 5.863e-52 185.0 COG3118@1|root,COG3118@2|Bacteria,1MZBB@1224|Proteobacteria,1S5WR@1236|Gammaproteobacteria,1WY87@135613|Chromatiales 135613|Chromatiales O Belongs to the thioredoxin family - - - ko:K03671 ko04621,ko05418,map04621,map05418 - - - ko00000,ko00001,ko03110 - - - Thioredoxin QTD1_k127_521646_2 396588.Tgr7_0356 1.169e-165 531.0 COG0513@1|root,COG0513@2|Bacteria,1MU49@1224|Proteobacteria,1RMWA@1236|Gammaproteobacteria,1WWMG@135613|Chromatiales 135613|Chromatiales L DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA rhlB - 3.6.4.13 ko:K03732 ko03018,map03018 M00394 - - ko00000,ko00001,ko00002,ko01000,ko03019 - - - DEAD,Helicase_C QTD1_k127_521646_8 396588.Tgr7_3049 1.733e-14 76.0 COG5481@1|root,COG5481@2|Bacteria 2|Bacteria S small protein containing a coiled-coil domain MA20_03740 - - - - - - - - - - - DUF465 QTD1_k127_521646_3 314345.SPV1_12415 1.399e-85 301.0 COG3264@1|root,COG3264@2|Bacteria,1MWSA@1224|Proteobacteria 1224|Proteobacteria M mechanosensitive ion channel aefA - - - - - - - - - - - MS_channel QTD1_k127_521646_6 331869.BAL199_20023 3.05e-35 138.0 COG1186@1|root,COG1186@2|Bacteria,1RH75@1224|Proteobacteria,2U9M7@28211|Alphaproteobacteria,4BSCQ@82117|unclassified Alphaproteobacteria 28211|Alphaproteobacteria J RF-1 domain MA20_05665 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0032268,GO:0032984,GO:0034248,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 - ko:K15034 - - - - ko00000,ko03012 - - - RF-1 QTD1_k127_521646_7 1123073.KB899241_gene2167 2.711e-33 134.0 COG3556@1|root,COG3556@2|Bacteria,1N003@1224|Proteobacteria,1SFDG@1236|Gammaproteobacteria,1XCZQ@135614|Xanthomonadales 135614|Xanthomonadales S Predicted membrane protein (DUF2214) - - - - - - - - - - - - DUF2214 QTD1_k127_521646_1 391615.ABSJ01000054_gene1379 1.214e-220 708.0 COG1033@1|root,COG1033@2|Bacteria,1MUE1@1224|Proteobacteria,1RN01@1236|Gammaproteobacteria,1J5BG@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria S MMPL family - - - ko:K07003 - - - - ko00000 - - - MMPL QTD1_k127_5219498_3 1109445.AGSX01000117_gene3375 7.028e-95 329.0 COG4796@1|root,COG4796@2|Bacteria,1QTT6@1224|Proteobacteria,1RN3Z@1236|Gammaproteobacteria,1YZXM@136846|Pseudomonas stutzeri group 1236|Gammaproteobacteria U COG4796 Type II secretory pathway, component HofQ pilQ GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015976,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 - ko:K02507,ko:K02666 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - AMIN,STN,Secretin,Secretin_N QTD1_k127_5219498_6 1122604.JONR01000010_gene3937 1.763e-41 159.0 COG3168@1|root,COG3168@2|Bacteria,1RI6V@1224|Proteobacteria,1S6VJ@1236|Gammaproteobacteria,1X61Y@135614|Xanthomonadales 135614|Xanthomonadales NU pilus assembly protein pilp pilP - - ko:K02665 - - - - ko00000,ko02035,ko02044 - - - PilP QTD1_k127_5219498_4 1415779.JOMH01000001_gene645 1.873e-55 206.0 COG3167@1|root,COG3167@2|Bacteria,1RBGW@1224|Proteobacteria,1S3XQ@1236|Gammaproteobacteria,1X4H8@135614|Xanthomonadales 135614|Xanthomonadales NU Pilus assembly protein, PilO pilO - - ko:K02664 - - - - ko00000,ko02035,ko02044 - - - PilO QTD1_k127_5219498_7 1249627.D779_0849 3.078e-41 160.0 COG3166@1|root,COG3166@2|Bacteria,1RF1S@1224|Proteobacteria,1S3S0@1236|Gammaproteobacteria,1WY4Z@135613|Chromatiales 135613|Chromatiales NU PFAM Fimbrial assembly - - - ko:K02663 - - - - ko00000,ko02035,ko02044 - - - PilN QTD1_k127_5219498_2 1234364.AMSF01000075_gene1933 2.282e-106 355.0 COG4972@1|root,COG4972@2|Bacteria,1MX8P@1224|Proteobacteria,1RN8S@1236|Gammaproteobacteria,1X3US@135614|Xanthomonadales 135614|Xanthomonadales NU Pilus assembly protein pilM - - ko:K02662 - - - - ko00000,ko02035,ko02044 - - - PilM_2 QTD1_k127_5219498_0 105559.Nwat_0344 3.04e-238 763.0 COG5009@1|root,COG5009@2|Bacteria,1MU5A@1224|Proteobacteria,1RM7J@1236|Gammaproteobacteria,1WWH1@135613|Chromatiales 135613|Chromatiales M TIGRFAM penicillin-binding protein, 1A - - 2.4.1.129,3.4.16.4 ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 - - - ko00000,ko00001,ko01000,ko01003,ko01011 - GT51 - PCB_OB,Transgly,Transpeptidase QTD1_k127_5219498_5 1033802.SSPSH_003537 3.46e-49 186.0 COG2413@1|root,COG2413@2|Bacteria,1RFTH@1224|Proteobacteria,1T4QX@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_5219498_1 1033802.SSPSH_003347 5.526e-184 580.0 COG0372@1|root,COG0372@2|Bacteria,1MUKX@1224|Proteobacteria,1RNDK@1236|Gammaproteobacteria 1236|Gammaproteobacteria C Belongs to the citrate synthase family gltA - 2.3.3.1 ko:K01647 ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00740 R00351 RC00004,RC00067 br01601,ko00000,ko00001,ko00002,ko01000 - - - Citrate_synt QTD1_k127_5221_0 243233.MCA2214 1.262e-249 798.0 COG0642@1|root,COG2205@2|Bacteria,1MUZQ@1224|Proteobacteria,1RMZT@1236|Gammaproteobacteria,1XECF@135618|Methylococcales 135618|Methylococcales T Histidine kinase - - 2.7.13.3 ko:K07646 ko02020,map02020 M00454 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - DUF4118,GAF_3,HATPase_c,HisKA,KdpD,Usp QTD1_k127_5221_3 987059.RBXJA2T_14953 4.866e-72 252.0 COG0745@1|root,COG0745@2|Bacteria,1MWZ5@1224|Proteobacteria,2VIM1@28216|Betaproteobacteria,1KKR0@119065|unclassified Burkholderiales 28216|Betaproteobacteria K Regulator kdpE - - ko:K07667 ko02020,ko02024,map02020,map02024 M00454 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C QTD1_k127_5221_6 330214.NIDE2453 1.207e-34 137.0 COG0071@1|root,COG0071@2|Bacteria,3J0TV@40117|Nitrospirae 40117|Nitrospirae O Belongs to the small heat shock protein (HSP20) family - - - ko:K13993 ko04141,map04141 - - - ko00000,ko00001,ko03110 - - - HSP20 QTD1_k127_5221_1 1366050.N234_10460 5.721e-124 406.0 COG1163@1|root,COG1163@2|Bacteria,1RFPD@1224|Proteobacteria,2VZKC@28216|Betaproteobacteria,1KBNU@119060|Burkholderiaceae 28216|Betaproteobacteria S TGS domain - - - ko:K06944 - - - - ko00000 - - - MMR_HSR1,TGS QTD1_k127_5221_5 1123499.KB908034_gene327 1.123e-35 143.0 COG1406@1|root,COG1406@2|Bacteria,1R99A@1224|Proteobacteria,2VMW9@28216|Betaproteobacteria,2KPHV@206351|Neisseriales 206351|Neisseriales N Chemotaxis phosphatase CheX - - - ko:K03409 ko02030,map02030 - - - ko00000,ko00001,ko02035 - - - CheX QTD1_k127_5221_4 1122243.KB903773_gene1331 6.563e-38 151.0 COG2201@1|root,COG2201@2|Bacteria,1N3V6@1224|Proteobacteria,1SATM@1236|Gammaproteobacteria,3NRM0@468|Moraxellaceae 1236|Gammaproteobacteria NT cheY-homologous receiver domain - - 3.1.1.61,3.5.1.44 ko:K03412,ko:K03413 ko02020,ko02030,map02020,map02030 M00506 - - ko00000,ko00001,ko00002,ko01000,ko02022,ko02035 - - - Response_reg QTD1_k127_5221_2 391615.ABSJ01000017_gene1695 1.277e-91 319.0 COG0643@1|root,COG2198@1|root,COG0643@2|Bacteria,COG2198@2|Bacteria,1MUAG@1224|Proteobacteria,1S0TD@1236|Gammaproteobacteria 1236|Gammaproteobacteria T Hpt domain - - - - - - - - - - - - HATPase_c,Hpt QTD1_k127_5278495_2 1163617.SCD_n00367 2.309e-37 149.0 COG2863@1|root,COG2863@2|Bacteria,1R8K9@1224|Proteobacteria 1224|Proteobacteria C Pfam cytochrome c - - - ko:K17230 ko00920,ko01120,map00920,map01120 - R09499 - ko00000,ko00001 - - - Cytochrom_C,Cytochrome_CBB3 QTD1_k127_5278495_3 1265313.HRUBRA_02293 1.222e-27 120.0 COG3631@1|root,COG3631@2|Bacteria,1NA13@1224|Proteobacteria,1SSSD@1236|Gammaproteobacteria,1JB6W@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria S SnoaL-like domain - - - - - - - - - - - - SnoaL_2 QTD1_k127_5278495_1 1049564.TevJSym_al00340 3.337e-133 432.0 COG0309@1|root,COG0309@2|Bacteria,1MVCC@1224|Proteobacteria,1RQBE@1236|Gammaproteobacteria,1JA5R@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria O AIR synthase related protein, N-terminal domain hypE GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0018193,GO:0018198,GO:0018249,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046892,GO:0051604,GO:0071704,GO:1901564 - ko:K04655 - - - - ko00000 - - - AIRS,AIRS_C QTD1_k127_5278495_0 292415.Tbd_1385 9.419e-172 550.0 COG0068@1|root,COG0068@2|Bacteria,1MVP8@1224|Proteobacteria,2VHS4@28216|Betaproteobacteria 28216|Betaproteobacteria O Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide - - - ko:K04656 - - - - ko00000 - - - Acylphosphatase,Sua5_yciO_yrdC,zf-HYPF QTD1_k127_5279282_12 211165.AJLN01000037_gene1910 6.097e-37 143.0 COG2197@1|root,COG2197@2|Bacteria,1G5A4@1117|Cyanobacteria,1JJ7Y@1189|Stigonemataceae 1117|Cyanobacteria KT helix_turn_helix, Lux Regulon - - - ko:K02479 - - - - ko00000,ko02022 - - - GerE,Response_reg QTD1_k127_5279282_8 76114.ebA6557 4.594e-51 184.0 arCOG05276@1|root,3195F@2|Bacteria,1RHZA@1224|Proteobacteria,2VSYY@28216|Betaproteobacteria 28216|Betaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_5279282_10 187272.Mlg_2696 1.14e-38 147.0 COG2924@1|root,COG2924@2|Bacteria,1MZ2V@1224|Proteobacteria,1S964@1236|Gammaproteobacteria,1WYU9@135613|Chromatiales 135613|Chromatiales CO Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - - - - - - - - - - Iron_traffic QTD1_k127_5279282_3 1121937.AUHJ01000013_gene822 2.267e-108 363.0 COG1194@1|root,COG1194@2|Bacteria,1MUD4@1224|Proteobacteria,1RMBT@1236|Gammaproteobacteria,4642P@72275|Alteromonadaceae 1236|Gammaproteobacteria L COG1194 A G-specific DNA glycosylase mutY GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - ko:K03575 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - EndIII_4Fe-2S,HhH-GPD,NUDIX_4 QTD1_k127_5279282_16 1122134.KB893651_gene1824 1.78e-14 84.0 COG3595@1|root,COG3595@2|Bacteria,1NG89@1224|Proteobacteria,1SCZV@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - DUF4097 QTD1_k127_5279282_17 1123261.AXDW01000007_gene2278 0.0005068 49.0 295UG@1|root,2ZT5J@2|Bacteria,1P953@1224|Proteobacteria,1SV6P@1236|Gammaproteobacteria,1XBQJ@135614|Xanthomonadales 135614|Xanthomonadales - - - - - - - - - - - - - - - QTD1_k127_5279282_11 861299.J421_4375 2.348e-38 150.0 COG1595@1|root,COG1595@2|Bacteria,1ZTNR@142182|Gemmatimonadetes 142182|Gemmatimonadetes K Sigma-70 region 2 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 QTD1_k127_5279282_5 1121033.AUCF01000004_gene4934 6.228e-88 303.0 COG0408@1|root,COG0408@2|Bacteria,1MWMF@1224|Proteobacteria,2TQNC@28211|Alphaproteobacteria,2JR26@204441|Rhodospirillales 204441|Rhodospirillales H Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX hemF - 1.3.3.3 ko:K00228 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R03220 RC00884 ko00000,ko00001,ko00002,ko01000 - - - Coprogen_oxidas QTD1_k127_5279282_4 338963.Pcar_0769 2.766e-94 328.0 COG0407@1|root,COG0407@2|Bacteria,1MUG1@1224|Proteobacteria,42MV9@68525|delta/epsilon subdivisions,2WJZK@28221|Deltaproteobacteria,43S1P@69541|Desulfuromonadales 28221|Deltaproteobacteria H Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III hemE GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 ko:K01599 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R03197,R04972 RC00872 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_0016 URO-D QTD1_k127_5279282_1 867903.ThesuDRAFT_01617 3.853e-120 397.0 COG0113@1|root,COG0113@2|Bacteria,1TP09@1239|Firmicutes,2496V@186801|Clostridia,3WCFQ@538999|Clostridiales incertae sedis 186801|Clostridia H Delta-aminolevulinic acid dehydratase hemB - 4.2.1.24 ko:K01698 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R00036 RC00918,RC01781 ko00000,ko00001,ko00002,ko01000,ko04147 - - iHN637.CLJU_RS15750 ALAD QTD1_k127_5279282_15 166318.Syn8016DRAFT_2433 1.327e-16 93.0 COG1587@1|root,COG1587@2|Bacteria,1G1Y4@1117|Cyanobacteria,1GYDJ@1129|Synechococcus 1117|Cyanobacteria H Uroporphyrinogen-III synthase hemD - 2.1.1.107,4.2.1.75 ko:K01719,ko:K13542 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R03165,R03194 RC00003,RC00871,RC01861 ko00000,ko00001,ko00002,ko01000 - - iJN678.hemD HEM4,TP_methylase QTD1_k127_5279282_7 1123368.AUIS01000023_gene910 1.483e-67 241.0 COG0181@1|root,COG0181@2|Bacteria,1MU56@1224|Proteobacteria,1RMQ8@1236|Gammaproteobacteria,2NCR8@225057|Acidithiobacillales 225057|Acidithiobacillales H Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps hemC - 2.5.1.61 ko:K01749 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R00084 RC02317 ko00000,ko00001,ko00002,ko01000 - - - Porphobil_deam,Porphobil_deamC QTD1_k127_5279282_6 649638.Trad_0223 4.959e-75 266.0 COG0745@1|root,COG0745@2|Bacteria,1WM7Q@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus K COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - - - - - - - - - - Response_reg,Trans_reg_C QTD1_k127_5279282_14 338966.Ppro_0508 1.518e-26 124.0 COG5002@1|root,COG5002@2|Bacteria,1QXNZ@1224|Proteobacteria,43C4T@68525|delta/epsilon subdivisions,2X7F7@28221|Deltaproteobacteria,43T48@69541|Desulfuromonadales 28221|Deltaproteobacteria T Histidine kinase - - - - - - - - - - - - HATPase_c,HisKA QTD1_k127_5279282_0 1122222.AXWR01000028_gene946 4.314e-136 445.0 COG0001@1|root,COG0001@2|Bacteria,1WJ8G@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus H PFAM aminotransferase class-III hemL - 5.4.3.8 ko:K01845 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R02272 RC00677 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_3 QTD1_k127_5279282_13 477641.MODMU_2514 5.548e-27 125.0 COG0373@1|root,COG0373@2|Bacteria,2GJRA@201174|Actinobacteria,4ERHS@85013|Frankiales 201174|Actinobacteria H Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) hemA - 1.2.1.70 ko:K02492 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R04109 RC00055,RC00149 ko00000,ko00001,ko00002,ko01000 - - - GlutR_N,GlutR_dimer,Shikimate_DH QTD1_k127_5279282_2 1121127.JAFA01000010_gene4032 3.765e-110 366.0 COG0625@1|root,COG0625@2|Bacteria,1RHXQ@1224|Proteobacteria,2W2WE@28216|Betaproteobacteria 28216|Betaproteobacteria O glutathione transferase activity - - - - - - - - - - - - - QTD1_k127_5279282_9 1121106.JQKB01000007_gene1018 4.13e-43 159.0 COG0454@1|root,COG0456@2|Bacteria,1RHB3@1224|Proteobacteria,2U70A@28211|Alphaproteobacteria 28211|Alphaproteobacteria K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - ko:K03829 - - - - ko00000,ko01000 - - - Acetyltransf_1 QTD1_k127_5285792_10 765910.MARPU_09040 5.93e-11 68.0 COG1187@1|root,COG1187@2|Bacteria,1MUCE@1224|Proteobacteria,1RQU0@1236|Gammaproteobacteria,1WW93@135613|Chromatiales 135613|Chromatiales J Belongs to the pseudouridine synthase RsuA family - - 5.4.99.22 ko:K06178 - - - - ko00000,ko01000,ko03009 - - - PseudoU_synth_2,S4 QTD1_k127_5285792_5 472759.Nhal_3573 1.381e-58 225.0 COG1386@1|root,COG1386@2|Bacteria,1PUA6@1224|Proteobacteria,1RNXE@1236|Gammaproteobacteria,1WW3N@135613|Chromatiales 135613|Chromatiales D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves - - - ko:K06024 - - - - ko00000,ko03036 - - - SMC_ScpB QTD1_k127_5285792_3 472759.Nhal_3574 2.464e-98 333.0 COG1354@1|root,COG1354@2|Bacteria,1MVCN@1224|Proteobacteria,1RNBB@1236|Gammaproteobacteria,1WW4R@135613|Chromatiales 135613|Chromatiales D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves - - - ko:K05896 - - - - ko00000,ko03036 - - - SMC_ScpA QTD1_k127_5285792_1 626887.J057_20620 5.738e-189 597.0 COG0180@1|root,COG0180@2|Bacteria,1MV4T@1224|Proteobacteria,1RNDC@1236|Gammaproteobacteria,464FH@72275|Alteromonadaceae 1236|Gammaproteobacteria J Tryptophanyl-tRNA synthetase trpS - 6.1.1.2 ko:K01867 ko00970,map00970 M00359,M00360 R03664 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_1b QTD1_k127_5285792_4 1288494.EBAPG3_1800 6.79e-74 270.0 COG0009@1|root,COG0009@2|Bacteria,1MVPM@1224|Proteobacteria,2VH4T@28216|Betaproteobacteria,3729G@32003|Nitrosomonadales 28216|Betaproteobacteria J Belongs to the SUA5 family yciO - - - - - - - - - - - Sua5_yciO_yrdC QTD1_k127_5285792_7 243233.MCA1646 3.378e-30 135.0 COG2917@1|root,COG2917@2|Bacteria,1NWIZ@1224|Proteobacteria,1RQAB@1236|Gammaproteobacteria,1XF33@135618|Methylococcales 135618|Methylococcales D probably involved in intracellular septation - - - ko:K06190 - - - - ko00000 - - - IspA QTD1_k127_5285792_8 1163408.UU9_05559 5.109e-22 99.0 COG0271@1|root,COG0271@2|Bacteria,1QCDM@1224|Proteobacteria,1RTFD@1236|Gammaproteobacteria,1X7ES@135614|Xanthomonadales 135614|Xanthomonadales T Belongs to the BolA IbaG family - - - ko:K05527 - - - - ko00000,ko03000 - - - BolA QTD1_k127_5285792_6 1158292.JPOE01000002_gene1904 3.426e-47 181.0 COG0760@1|root,COG0760@2|Bacteria,1MZDK@1224|Proteobacteria,2VJZP@28216|Betaproteobacteria,1KJ83@119065|unclassified Burkholderiales 28216|Betaproteobacteria M peptidylprolyl isomerase cbf2 - 5.2.1.8 ko:K03769 - - - - ko00000,ko01000,ko03110 - - - Rotamase,Rotamase_3,SurA_N_3 QTD1_k127_5285792_0 667632.KB890219_gene672 6.413e-245 778.0 COG0272@1|root,COG0272@2|Bacteria,1MV3R@1224|Proteobacteria,2VIDE@28216|Betaproteobacteria,1K0GW@119060|Burkholderiaceae 28216|Betaproteobacteria L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA ligA - 6.5.1.2 ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 - R00382 RC00005 ko00000,ko00001,ko01000,ko03032,ko03400 - - - BRCT,DNA_ligase_OB,DNA_ligase_ZBD,DNA_ligase_aden,HHH_2,HHH_5 QTD1_k127_5285792_9 1207076.ALAT01000002_gene1311 8.819e-15 84.0 COG3115@1|root,COG3115@2|Bacteria,1MVHR@1224|Proteobacteria,1RMDB@1236|Gammaproteobacteria,1Z0IU@136846|Pseudomonas stutzeri group 1236|Gammaproteobacteria D Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins zipA GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0022402,GO:0022607,GO:0031224,GO:0031226,GO:0032153,GO:0032506,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0071944,GO:0090529,GO:1902410,GO:1903047 - ko:K03528 - - - - ko00000,ko03036 - - - ZipA_C QTD1_k127_5285792_2 765910.MARPU_02250 2.995e-113 383.0 COG1196@1|root,COG1196@2|Bacteria,1MUAQ@1224|Proteobacteria,1RNA6@1236|Gammaproteobacteria,1WW7V@135613|Chromatiales 135613|Chromatiales D Required for chromosome condensation and partitioning smc - - ko:K03529 - - - - ko00000,ko03036 - - - SMC_N,SMC_hinge QTD1_k127_5308138_3 717772.THIAE_03730 5.393e-48 176.0 COG0054@1|root,COG0054@2|Bacteria,1RD9J@1224|Proteobacteria,1S3WD@1236|Gammaproteobacteria,460J0@72273|Thiotrichales 72273|Thiotrichales H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin ribH - 2.5.1.78 ko:K00794 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R04457 RC00960 ko00000,ko00001,ko00002,ko01000 - - - DMRL_synthase QTD1_k127_5308138_1 1415780.JPOG01000001_gene894 7.158e-114 379.0 COG0108@1|root,COG0108@2|Bacteria,1MU8P@1224|Proteobacteria,1RQ49@1236|Gammaproteobacteria,1X31N@135614|Xanthomonadales 135614|Xanthomonadales H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate ribB - 3.5.4.25,4.1.99.12 ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 M00125,M00840 R00425,R07281 RC00293,RC01792,RC01815,RC02504 ko00000,ko00001,ko00002,ko01000 - - - DHBP_synthase,GTP_cyclohydro2 QTD1_k127_5308138_4 288000.BBta_1405 1.01e-36 145.0 COG0526@1|root,COG0526@2|Bacteria,1PEZG@1224|Proteobacteria,2UISB@28211|Alphaproteobacteria 28211|Alphaproteobacteria CO Thioredoxin - - - - - - - - - - - - AhpC-TSA QTD1_k127_5308138_2 767434.Fraau_0451 7.029e-63 222.0 COG0307@1|root,COG0307@2|Bacteria,1MUMB@1224|Proteobacteria,1RMSY@1236|Gammaproteobacteria,1X4H0@135614|Xanthomonadales 135614|Xanthomonadales H Riboflavin synthase ribE - 2.5.1.9 ko:K00793 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R00066 RC00958,RC00960 ko00000,ko00001,ko00002,ko01000 - - - Lum_binding QTD1_k127_5308138_0 765912.Thimo_0344 8.222e-117 388.0 COG0117@1|root,COG1985@1|root,COG0117@2|Bacteria,COG1985@2|Bacteria,1MUWT@1224|Proteobacteria,1RN2M@1236|Gammaproteobacteria,1WVVQ@135613|Chromatiales 135613|Chromatiales H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate ribD - 1.1.1.193,3.5.4.26 ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 M00125 R03458,R03459 RC00204,RC00933 ko00000,ko00001,ko00002,ko01000 - - - RibD_C,dCMP_cyt_deam_1 QTD1_k127_5308138_5 768671.ThimaDRAFT_3348 3.63e-14 75.0 COG1327@1|root,COG1327@2|Bacteria,1RE7V@1224|Proteobacteria,1S3P9@1236|Gammaproteobacteria,1WX91@135613|Chromatiales 135613|Chromatiales K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes nrdR - - ko:K07738 - - - - ko00000,ko03000 - - - ATP-cone QTD1_k127_532855_4 870187.Thini_3888 2.056e-74 265.0 COG0767@1|root,COG0767@2|Bacteria,1MVPN@1224|Proteobacteria,1RYHN@1236|Gammaproteobacteria,460J6@72273|Thiotrichales 72273|Thiotrichales P Permease MlaE - - - ko:K02066 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - MlaE,STAS_2 QTD1_k127_532855_2 1380391.JIAS01000013_gene3761 2.546e-86 302.0 COG1127@1|root,COG1127@2|Bacteria,1MUSD@1224|Proteobacteria,2TR2I@28211|Alphaproteobacteria,2JQTF@204441|Rhodospirillales 204441|Rhodospirillales Q ATPases associated with a variety of cellular activities - - - ko:K02065 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - ABC_tran QTD1_k127_532855_5 1380394.JADL01000001_gene2823 1.551e-43 172.0 COG1463@1|root,COG1463@2|Bacteria,1MU4B@1224|Proteobacteria,2U1JN@28211|Alphaproteobacteria,2JS8K@204441|Rhodospirillales 204441|Rhodospirillales Q MlaD protein - - - ko:K02067,ko:K06192 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - MlaD QTD1_k127_532855_6 454957.IA64_02935 8.146e-09 65.0 COG3218@1|root,COG3218@2|Bacteria,1RKQG@1224|Proteobacteria,1SYF9@1236|Gammaproteobacteria,1X6A3@135614|Xanthomonadales 135614|Xanthomonadales S ABC transporter - - - ko:K18480 - M00669 - - ko00000,ko00002,ko02000 3.A.1.27.1 - - ABC_trans_aux QTD1_k127_532855_0 243231.GSU0946 5.953e-134 458.0 COG5000@1|root,COG5001@1|root,COG5000@2|Bacteria,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,42M0W@68525|delta/epsilon subdivisions,2WIK8@28221|Deltaproteobacteria,43SWK@69541|Desulfuromonadales 28221|Deltaproteobacteria T sensor diguanylate cyclase phosphodiesterase - - - - - - - - - - - iAF987.Gmet_0700 EAL,GGDEF,HAMP,PAS_4,PAS_9 QTD1_k127_532855_3 1123261.AXDW01000010_gene333 1.005e-78 276.0 2CIBN@1|root,2Z8JT@2|Bacteria,1R902@1224|Proteobacteria,1RXPM@1236|Gammaproteobacteria,1X5H4@135614|Xanthomonadales 135614|Xanthomonadales S Metal dependent phosphohydrolases with conserved 'HD' motif. - - - - - - - - - - - - - QTD1_k127_532855_1 1095769.CAHF01000011_gene2667 7.801e-106 349.0 COG0708@1|root,COG0708@2|Bacteria,1MVII@1224|Proteobacteria,2VH7N@28216|Betaproteobacteria,473AJ@75682|Oxalobacteraceae 28216|Betaproteobacteria L Endonuclease/Exonuclease/phosphatase family xthA - 3.1.11.2 ko:K01142 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Exo_endo_phos QTD1_k127_5337193_5 388401.RB2150_15386 3.805e-51 184.0 COG0145@1|root,COG0146@1|root,COG0145@2|Bacteria,COG0146@2|Bacteria,1MU2Y@1224|Proteobacteria,2TQZ6@28211|Alphaproteobacteria 28211|Alphaproteobacteria EQ N-methylhydantoinase A acetone carboxylase, beta subunit oplaH - 3.5.2.9 ko:K01469 ko00480,map00480 - R00251 RC00553 ko00000,ko00001,ko01000 - - - Hydant_A_N,Hydantoinase_A,Hydantoinase_B QTD1_k127_5337193_3 1123065.ATWL01000016_gene2007 2.162e-67 239.0 COG0145@1|root,COG0146@1|root,COG0145@2|Bacteria,COG0146@2|Bacteria,2GIYE@201174|Actinobacteria 201174|Actinobacteria EQ PFAM Hydantoinase oxoprolinase oplA - 3.5.2.9 ko:K01469 ko00480,map00480 - R00251 RC00553 ko00000,ko00001,ko01000 - - iNJ661.Rv0266c Hydant_A_N,Hydantoinase_A,Hydantoinase_B QTD1_k127_5337193_6 1004785.AMBLS11_00670 9.679e-40 155.0 COG1073@1|root,COG1073@2|Bacteria,1RKV2@1224|Proteobacteria,1S95V@1236|Gammaproteobacteria,46CU0@72275|Alteromonadaceae 1236|Gammaproteobacteria S Uncharacterised protein family (UPF0227) - - - - - - - - - - - - Abhydrolase_6,UPF0227 QTD1_k127_5337193_2 1121878.AUGL01000020_gene3037 8.205e-87 295.0 COG0300@1|root,COG0300@2|Bacteria,1R7MT@1224|Proteobacteria,1S0XC@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Belongs to the short-chain dehydrogenases reductases (SDR) family - - - ko:K07124 - - - - ko00000 - - - adh_short QTD1_k127_5337193_1 452637.Oter_3167 2.143e-95 340.0 COG3203@1|root,COG3203@2|Bacteria 2|Bacteria M Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - - - - - - - - - - DUF1302 QTD1_k127_5337193_0 1149133.ppKF707_0078 3.208e-158 511.0 28H52@1|root,2Z7HQ@2|Bacteria,1MXTF@1224|Proteobacteria,1RN8H@1236|Gammaproteobacteria,1YDUI@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria S Protein of unknown function (DUF1329) IV02_13580 - - - - - - - - - - - DUF1329 QTD1_k127_5337193_4 391615.ABSJ01000054_gene1378 2.718e-60 221.0 COG4447@1|root,COG4447@2|Bacteria,1RCNG@1224|Proteobacteria,1S4IP@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Photosynthesis system II assembly factor YCF48 - - - - - - - - - - - - PSII_BNR QTD1_k127_5337193_7 237609.PSAKL28_26090 2.635e-08 58.0 COG1033@1|root,COG1033@2|Bacteria,1MUE1@1224|Proteobacteria,1RN01@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Exporters of the RND superfamily - - - ko:K07003 - - - - ko00000 - - - MMPL QTD1_k127_5390494_3 1304275.C41B8_10043 4.012e-167 535.0 COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,1RNGU@1236|Gammaproteobacteria 1236|Gammaproteobacteria I Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed fadI - 2.3.1.9 ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 M00088,M00095,M00373,M00374,M00375 R00238,R01177 RC00004,RC00326 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Thiolase_C,Thiolase_N QTD1_k127_5390494_6 331869.BAL199_05144 2.197e-65 232.0 COG0412@1|root,COG0412@2|Bacteria,1MW7S@1224|Proteobacteria,2TTPH@28211|Alphaproteobacteria,4BPJE@82117|unclassified Alphaproteobacteria 28211|Alphaproteobacteria Q Dienelactone hydrolase family MA20_23640 - 3.1.1.45 ko:K01061 ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130 - R03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222 RC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686 ko00000,ko00001,ko01000 - - - DLH QTD1_k127_5390494_1 305700.B447_19309 1.041e-233 730.0 COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2VHGR@28216|Betaproteobacteria,2KUI9@206389|Rhodocyclales 206389|Rhodocyclales C Belongs to the aldehyde dehydrogenase family gabD - 1.2.1.16,1.2.1.20,1.2.1.79 ko:K00135 ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120 M00027 R00713,R00714,R02401 RC00080 ko00000,ko00001,ko00002,ko01000 - - - Aldedh QTD1_k127_5390494_4 1123401.JHYQ01000008_gene374 2.286e-124 407.0 COG0276@1|root,COG0276@2|Bacteria,1MVR1@1224|Proteobacteria,1RMMS@1236|Gammaproteobacteria,45ZRJ@72273|Thiotrichales 72273|Thiotrichales H Catalyzes the ferrous insertion into protoporphyrin IX hemH - 4.99.1.1,4.99.1.9 ko:K01772 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R00310,R11329 RC01012 ko00000,ko00001,ko00002,ko01000 - - - Ferrochelatase QTD1_k127_5390494_11 1279009.ADICEAN_01751 5.111e-13 80.0 2DEGI@1|root,2ZMXA@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - QTD1_k127_5390494_10 1123257.AUFV01000015_gene3589 8.926e-21 104.0 COG2353@1|root,COG2353@2|Bacteria,1N3P9@1224|Proteobacteria,1SDBE@1236|Gammaproteobacteria,1XAHR@135614|Xanthomonadales 135614|Xanthomonadales S YceI-like domain - - - - - - - - - - - - YceI QTD1_k127_5390494_8 1177928.TH2_15822 7.206e-49 183.0 COG3038@1|root,COG3038@2|Bacteria,1MZ7X@1224|Proteobacteria,2UBYU@28211|Alphaproteobacteria,2JTKP@204441|Rhodospirillales 204441|Rhodospirillales C Prokaryotic cytochrome b561 - - - ko:K12262 - - - - ko00000 - - - Ni_hydr_CYTB QTD1_k127_5390494_9 570952.ATVH01000017_gene1783 7.14e-25 114.0 COG2353@1|root,COG3038@1|root,COG2353@2|Bacteria,COG3038@2|Bacteria,1MZ7X@1224|Proteobacteria,2UBYU@28211|Alphaproteobacteria,2JZNQ@204441|Rhodospirillales 204441|Rhodospirillales C Eukaryotic cytochrome b561 - - - - - - - - - - - - Ni_hydr_CYTB,YceI QTD1_k127_5390494_7 448385.sce6835 3.029e-49 183.0 COG3837@1|root,COG3837@2|Bacteria,1R9WZ@1224|Proteobacteria,432KZ@68525|delta/epsilon subdivisions,2WYH1@28221|Deltaproteobacteria,2Z12K@29|Myxococcales 28221|Deltaproteobacteria S Cupin domain - - - - - - - - - - - - Cupin_2 QTD1_k127_5390494_2 1192034.CAP_1007 2.099e-200 648.0 COG0427@1|root,COG0427@2|Bacteria,1Q8ZS@1224|Proteobacteria,42NSQ@68525|delta/epsilon subdivisions,2WK0D@28221|Deltaproteobacteria,2Z307@29|Myxococcales 28221|Deltaproteobacteria C Acetyl-CoA hydrolase/transferase C-terminal domain - - - - - - - - - - - - AcetylCoA_hyd_C QTD1_k127_5390494_0 1123261.AXDW01000009_gene110 0.0 1031.0 COG0365@1|root,COG0365@2|Bacteria,1MUF5@1224|Proteobacteria,1RMNZ@1236|Gammaproteobacteria,1X34U@135614|Xanthomonadales 135614|Xanthomonadales I Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA acsA - 6.2.1.1 ko:K01895 ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200 M00357 R00235,R00236,R00316,R00926,R01354 RC00004,RC00012,RC00043,RC00070,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000,ko01004 - - - ACAS_N,AMP-binding,AMP-binding_C QTD1_k127_5390494_5 765910.MARPU_00705 4.47e-87 299.0 COG3001@1|root,COG3001@2|Bacteria,1MVHX@1224|Proteobacteria,1RRC5@1236|Gammaproteobacteria,1WXE3@135613|Chromatiales 135613|Chromatiales G PFAM Fructosamine - - - - - - - - - - - - Fructosamin_kin QTD1_k127_5394731_1 1122135.KB893134_gene3130 3.86e-203 641.0 COG0001@1|root,COG0001@2|Bacteria,1MUY5@1224|Proteobacteria,2TU8Q@28211|Alphaproteobacteria 28211|Alphaproteobacteria H Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - 5.4.3.8 ko:K01845 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R02272 RC00677 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_3,CTP_transf_3 QTD1_k127_5394731_8 1380391.JIAS01000001_gene2643 3.724e-100 340.0 COG4638@1|root,COG4638@2|Bacteria,1MWXW@1224|Proteobacteria,2TSJ5@28211|Alphaproteobacteria,2JZME@204441|Rhodospirillales 28211|Alphaproteobacteria P Ring hydroxylating alpha subunit (catalytic domain) - - - - - - - - - - - - Rieske,Ring_hydroxyl_A QTD1_k127_5394731_11 935261.JAGL01000019_gene597 4.795e-32 134.0 COG1309@1|root,COG1309@2|Bacteria,1RDM7@1224|Proteobacteria,2U83S@28211|Alphaproteobacteria,43HPZ@69277|Phyllobacteriaceae 28211|Alphaproteobacteria K BetI-type transcriptional repressor, C-terminal - - - ko:K02167 - - - - ko00000,ko03000 - - - TetR_C_6,TetR_N QTD1_k127_5394731_5 269796.Rru_A1016 5.144e-111 370.0 COG1176@1|root,COG1176@2|Bacteria,1MVGM@1224|Proteobacteria,2TSFD@28211|Alphaproteobacteria,2JQTE@204441|Rhodospirillales 204441|Rhodospirillales E Putrescine transport system permease potH - - ko:K11075 ko02010,map02010 M00300 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11.2 - - BPD_transp_1 QTD1_k127_5394731_10 1122201.AUAZ01000009_gene2768 5.972e-91 309.0 COG1177@1|root,COG1177@2|Bacteria,1MVC5@1224|Proteobacteria,1RQB7@1236|Gammaproteobacteria,46461@72275|Alteromonadaceae 1236|Gammaproteobacteria P COG1177 ABC-type spermidine putrescine transport system, permease component II potI - - ko:K11074 ko02010,map02010 M00300 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11.2 - - BPD_transp_1 QTD1_k127_5394731_4 1122201.AUAZ01000042_gene1270 6.18e-127 415.0 COG3547@1|root,COG3547@2|Bacteria,1MUER@1224|Proteobacteria,1RMAQ@1236|Gammaproteobacteria,465EU@72275|Alteromonadaceae 1236|Gammaproteobacteria L COG3547 Transposase and inactivated derivatives - - - ko:K07486 - - - - ko00000 - - - DEDD_Tnp_IS110,Transposase_20 QTD1_k127_5394731_6 1149133.ppKF707_3655 8.784e-109 364.0 COG0687@1|root,COG0687@2|Bacteria,1MUYW@1224|Proteobacteria,1RM7W@1236|Gammaproteobacteria,1YDF5@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria E Bacterial extracellular solute-binding protein potF - - ko:K11073 ko02010,map02010 M00300 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11.2 - - SBP_bac_8 QTD1_k127_5394731_0 1458275.AZ34_11760 1.115e-211 667.0 COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2VHNV@28216|Betaproteobacteria,4AB55@80864|Comamonadaceae 28216|Betaproteobacteria C belongs to the aldehyde dehydrogenase family - - 1.2.1.19 ko:K00137 ko00330,ko00410,ko01100,map00330,map00410,map01100 - R02549 RC00080 ko00000,ko00001,ko01000 - - - Aldedh QTD1_k127_5394731_7 570268.ANBB01000079_gene4457 1.02e-106 359.0 COG3246@1|root,COG3246@2|Bacteria,2I9EQ@201174|Actinobacteria,4EJY6@85012|Streptosporangiales 201174|Actinobacteria S beta-keto acid cleavage enzyme - - - - - - - - - - - - BKACE QTD1_k127_5394731_12 999611.KI421504_gene296 1.126e-31 129.0 COG0824@1|root,COG0824@2|Bacteria,1MZB3@1224|Proteobacteria 1224|Proteobacteria I Thioesterase cdhB - - ko:K07107 - - - - ko00000,ko01000 - - - 4HBT_2 QTD1_k127_5394731_3 1122135.KB893166_gene2819 2.309e-153 514.0 COG1042@1|root,COG1042@2|Bacteria,1MW98@1224|Proteobacteria,2TR24@28211|Alphaproteobacteria 28211|Alphaproteobacteria C COG1042 Acyl-CoA synthetase (NDP forming) - - 6.2.1.1 ko:K01895 ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200 M00357 R00235,R00236,R00316,R00926,R01354 RC00004,RC00012,RC00043,RC00070,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000,ko01004 - - - ATP-grasp_5,CoA_binding_2,Succ_CoA_lig QTD1_k127_5394731_9 314265.R2601_02553 3.612e-92 310.0 COG1024@1|root,COG1024@2|Bacteria,1MWZC@1224|Proteobacteria,2TRIH@28211|Alphaproteobacteria 28211|Alphaproteobacteria I Belongs to the enoyl-CoA hydratase isomerase family - - 4.2.1.149 ko:K08299 - - R10675 RC01095 ko00000,ko01000 - - - ECH_1 QTD1_k127_5394731_2 1116369.KB890024_gene3720 1.279e-185 589.0 COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TQKE@28211|Alphaproteobacteria,43H7H@69277|Phyllobacteriaceae 28211|Alphaproteobacteria I acyl-CoA dehydrogenase acdA - 1.3.8.7 ko:K00249 ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320 M00013,M00036,M00087 R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754 RC00052,RC00068,RC00076,RC00095,RC00148,RC00246 ko00000,ko00001,ko00002,ko01000 - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N QTD1_k127_5394731_13 219305.MCAG_01444 1.836e-10 68.0 COG1309@1|root,COG1309@2|Bacteria,2GP61@201174|Actinobacteria,4DDUQ@85008|Micromonosporales 201174|Actinobacteria K BetI-type transcriptional repressor, C-terminal - - - - - - - - - - - - TetR_C_6,TetR_N QTD1_k127_5438452_7 1123368.AUIS01000030_gene1255 6.311e-74 257.0 COG0190@1|root,COG0190@2|Bacteria,1MWU4@1224|Proteobacteria,1RNSW@1236|Gammaproteobacteria,2NBQE@225057|Acidithiobacillales 225057|Acidithiobacillales F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate folD - 1.5.1.5,3.5.4.9 ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R01220,R01655 RC00202,RC00578 ko00000,ko00001,ko00002,ko01000 - - - THF_DHG_CYH,THF_DHG_CYH_C QTD1_k127_5438452_1 1000565.METUNv1_02979 1.067e-254 792.0 COG0499@1|root,COG0499@2|Bacteria,1MUQ2@1224|Proteobacteria,2VH57@28216|Betaproteobacteria,2KVI2@206389|Rhodocyclales 206389|Rhodocyclales H May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine ahcY - 3.3.1.1 ko:K01251 ko00270,ko01100,map00270,map01100 M00035 R00192,R04936 RC00056,RC00069,RC01161,RC01243 ko00000,ko00001,ko00002,ko01000,ko01009,ko04147 - - - AdoHcyase,AdoHcyase_NAD QTD1_k127_5438452_3 555778.Hneap_0413 5.019e-194 612.0 COG0192@1|root,COG0192@2|Bacteria,1MUFQ@1224|Proteobacteria,1RNV6@1236|Gammaproteobacteria,1WVWR@135613|Chromatiales 135613|Chromatiales H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme metK - 2.5.1.6 ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 M00034,M00035,M00368,M00609 R00177,R04771 RC00021,RC01211 ko00000,ko00001,ko00002,ko01000 - - - S-AdoMet_synt_C,S-AdoMet_synt_M,S-AdoMet_synt_N QTD1_k127_5438452_5 396588.Tgr7_0173 1.805e-131 434.0 COG0524@1|root,COG0524@2|Bacteria,1QTMS@1224|Proteobacteria,1RQQY@1236|Gammaproteobacteria,1WZWK@135613|Chromatiales 135613|Chromatiales G pfkB family carbohydrate kinase - - 2.7.1.20 ko:K00856 ko00230,ko01100,map00230,map01100 - R00185 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PfkB QTD1_k127_5438452_10 1144319.PMI16_02490 1.878e-10 71.0 2E4CR@1|root,32Z86@2|Bacteria,1N7UZ@1224|Proteobacteria,2VVR1@28216|Betaproteobacteria,477VY@75682|Oxalobacteraceae 28216|Betaproteobacteria C NADH-dependant formate dehydrogenase delta subunit FdsD fdsD - 1.17.1.9 ko:K00126 ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200 - R00519 RC02796 ko00000,ko00001,ko01000 - - - FdsD QTD1_k127_5438452_6 1283300.ATXB01000001_gene1023 2.516e-82 282.0 COG1526@1|root,COG1526@2|Bacteria,1NRU0@1224|Proteobacteria,1RNFH@1236|Gammaproteobacteria,1XDUR@135618|Methylococcales 135618|Methylococcales C Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH fdhD - - ko:K02379 - - - - ko00000 - - - FdhD-NarQ QTD1_k127_5438452_4 1415779.JOMH01000001_gene551 2.058e-174 552.0 COG3383@1|root,COG3383@2|Bacteria,1QTZB@1224|Proteobacteria,1T1JA@1236|Gammaproteobacteria,1X3JM@135614|Xanthomonadales 135614|Xanthomonadales C Molybdopterin oxidoreductase Fe4S4 domain - - 1.17.1.9 ko:K00123 ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200 - R00519 RC02796 ko00000,ko00001,ko01000 - - - Fer2_4,Fer4,Fer4_7,Fer4_9,Molybdop_Fe4S4,Molybdopterin,Molydop_binding,NADH-G_4Fe-4S_3 QTD1_k127_5438452_0 1333856.L686_07835 2.548e-281 874.0 COG3383@1|root,COG3383@2|Bacteria,1QTZB@1224|Proteobacteria,1T1JA@1236|Gammaproteobacteria,1Z2JC@136846|Pseudomonas stutzeri group 1236|Gammaproteobacteria C Molybdopterin oxidoreductase Fe4S4 domain fdhF GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009987,GO:0015942,GO:0015944,GO:0016491,GO:0016651,GO:0016999,GO:0017144,GO:0019752,GO:0030151,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704 1.17.1.9,1.17.99.7 ko:K00123,ko:K22015 ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200 - R00519 RC02796 ko00000,ko00001,ko01000 - - iECBD_1354.ECBD_3953 Fer2_4,Fer4,Fer4_7,Molybdop_Fe4S4,Molybdopterin,Molydop_binding,NADH-G_4Fe-4S_3 QTD1_k127_5438452_2 748247.AZKH_p0278 9.935e-237 757.0 COG1894@1|root,COG1894@2|Bacteria,1MV8F@1224|Proteobacteria,2VIGR@28216|Betaproteobacteria,2KXTE@206389|Rhodocyclales 206389|Rhodocyclales C NADH-ubiquinone oxidoreductase-F iron-sulfur binding region - - - ko:K00124 ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200 - R00519 RC02796 ko00000,ko00001 - - - Complex1_51K,NADH_4Fe-4S QTD1_k127_5438452_8 1234364.AMSF01000088_gene2739 1.557e-53 206.0 COG1905@1|root,COG1905@2|Bacteria,1RHBU@1224|Proteobacteria,1T09A@1236|Gammaproteobacteria,1XCZH@135614|Xanthomonadales 135614|Xanthomonadales C Thioredoxin-like [2Fe-2S] ferredoxin - - - - - - - - - - - - 2Fe-2S_thioredx QTD1_k127_5438452_11 1121013.P873_09920 2.518e-09 67.0 2C5U9@1|root,2Z9NJ@2|Bacteria,1R6D0@1224|Proteobacteria,1T076@1236|Gammaproteobacteria,1XCYZ@135614|Xanthomonadales 135614|Xanthomonadales S Bacterial protein of unknown function (Gcw_chp) - - - - - - - - - - - - Gcw_chp QTD1_k127_5438452_9 1122604.JONR01000007_gene2931 5.23e-45 174.0 COG1595@1|root,COG1595@2|Bacteria,1MVPD@1224|Proteobacteria,1SC6Q@1236|Gammaproteobacteria,1X520@135614|Xanthomonadales 135614|Xanthomonadales K Belongs to the sigma-70 factor family. ECF subfamily rpoE4 - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4,Sigma70_r4_2 QTD1_k127_5438452_12 1300345.LF41_1608 0.0009113 50.0 2EBKV@1|root,335M7@2|Bacteria,1NAHA@1224|Proteobacteria,1SICQ@1236|Gammaproteobacteria,1X6IR@135614|Xanthomonadales 135614|Xanthomonadales - - - - - - - - - - - - - - zf-HC2 QTD1_k127_5441159_1 765912.Thimo_2101 7.54e-205 663.0 COG0744@1|root,COG0744@2|Bacteria,1QTST@1224|Proteobacteria,1RNHV@1236|Gammaproteobacteria,1WXN2@135613|Chromatiales 135613|Chromatiales M Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) - - 2.4.1.129,3.4.16.4 ko:K05365 ko00550,map00550 - R04519 RC00005,RC00049 ko00000,ko00001,ko01000,ko01003,ko01011 - GT51 - Transgly,Transpeptidase,UB2H QTD1_k127_5441159_0 518766.Rmar_1656 9.646e-298 942.0 COG0019@1|root,COG0527@1|root,COG0019@2|Bacteria,COG0527@2|Bacteria,4NFWR@976|Bacteroidetes,1FIKN@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes E Belongs to the Orn Lys Arg decarboxylase class-II family - - 2.7.2.4,4.1.1.20 ko:K00928,ko:K12526 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R00451,R00480 RC00002,RC00043,RC00299 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase,Orn_Arg_deC_N,Orn_DAP_Arg_deC QTD1_k127_5441159_8 517417.Cpar_0408 4.572e-51 191.0 COG1912@1|root,COG1912@2|Bacteria,1FDZ8@1090|Chlorobi 1090|Chlorobi M S-adenosyl-l-methionine hydroxide adenosyltransferase - - - ko:K22205 - - - - ko00000,ko01000 - - - SAM_adeno_trans QTD1_k127_5441159_9 1298593.TOL_3407 3.701e-18 92.0 COG1734@1|root,COG1734@2|Bacteria,1N8K6@1224|Proteobacteria,1SCNZ@1236|Gammaproteobacteria,1XMVA@135619|Oceanospirillales 135619|Oceanospirillales T Prokaryotic dksA/traR C4-type zinc finger - - - - - - - - - - - - zf-dskA_traR QTD1_k127_5441159_3 649638.Trad_1769 1.111e-105 356.0 COG0176@1|root,COG0176@2|Bacteria,1WN6Y@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus G Pfam:Transaldolase - - 2.2.1.2 ko:K00616 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007 R01827 RC00439,RC00604 ko00000,ko00001,ko00002,ko01000 - - - TAL_FSA QTD1_k127_5441159_10 1163617.SCD_n02116 3.757e-11 67.0 COG4575@1|root,COG4575@2|Bacteria,1N6X7@1224|Proteobacteria,2WFR8@28216|Betaproteobacteria 28216|Betaproteobacteria S Bacterial protein of unknown function (DUF883) - - - - - - - - - - - - DUF883 QTD1_k127_5441159_11 1000565.METUNv1_03152 4.392e-05 51.0 COG5393@1|root,COG5393@2|Bacteria,1NDFU@1224|Proteobacteria,2VX3I@28216|Betaproteobacteria,2KWJ8@206389|Rhodocyclales 206389|Rhodocyclales S Putative Actinobacterial Holin-X, holin superfamily III - - - - - - - - - - - - Phage_holin_3_6 QTD1_k127_5441159_4 1283300.ATXB01000001_gene2393 3.344e-89 306.0 COG1376@1|root,COG1376@2|Bacteria,1MVYT@1224|Proteobacteria,1RMNC@1236|Gammaproteobacteria,1XE3K@135618|Methylococcales 135618|Methylococcales M PFAM YkuD domain - - - ko:K16291 - - - - ko00000,ko01002,ko01011 - - - YkuD QTD1_k127_5441159_5 1122604.JONR01000040_gene4052 7.951e-61 215.0 COG2094@1|root,COG2094@2|Bacteria,1RE0A@1224|Proteobacteria,1S9CM@1236|Gammaproteobacteria,1X6BU@135614|Xanthomonadales 135614|Xanthomonadales L Belongs to the DNA glycosylase MPG family - GO:0003674,GO:0003824,GO:0003905,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.2.2.21 ko:K03652 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Pur_DNA_glyco QTD1_k127_5441159_7 765912.Thimo_2969 8.931e-57 205.0 COG1651@1|root,COG1651@2|Bacteria,1RGWH@1224|Proteobacteria,1S5WA@1236|Gammaproteobacteria,1WY1E@135613|Chromatiales 135613|Chromatiales O Thiol disulfide interchange protein - - - ko:K03673 ko01503,map01503 M00728 - - ko00000,ko00001,ko00002,ko03110 - - - DSBA QTD1_k127_5441159_6 1123393.KB891331_gene2981 6.245e-60 213.0 COG3134@1|root,COG3134@2|Bacteria,1R3N6@1224|Proteobacteria,2WIIP@28216|Betaproteobacteria,1KSSV@119069|Hydrogenophilales 119069|Hydrogenophilales S Glycine zipper 2TM domain - - - - - - - - - - - - Rick_17kDa_Anti QTD1_k127_5441159_2 1238182.C882_3450 7.31e-117 393.0 COG4770@1|root,COG4770@2|Bacteria,1P6RE@1224|Proteobacteria,2TRC2@28211|Alphaproteobacteria,2JPR7@204441|Rhodospirillales 204441|Rhodospirillales I COG4770 Acetyl propionyl-CoA carboxylase, alpha subunit - - 6.4.1.4 ko:K01968 ko00280,ko01100,map00280,map01100 M00036 R04138 RC00367,RC00942 ko00000,ko00001,ko00002,ko01000 - - - Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2 QTD1_k127_5446380_0 313628.LNTAR_02739 8.108e-101 341.0 COG0303@1|root,COG0303@2|Bacteria 2|Bacteria H 'Molybdopterin moeA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006464,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0018315,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0032324,GO:0034641,GO:0036211,GO:0042040,GO:0042278,GO:0043170,GO:0043412,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061598,GO:0061599,GO:0070566,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.10.1.1 ko:K03750 ko00790,ko01100,map00790,map01100 - R09735 RC03462 ko00000,ko00001,ko01000 - - - MoCF_biosynth,MoeA_C,MoeA_N QTD1_k127_5446380_1 1123257.AUFV01000008_gene664 8.844e-69 238.0 COG2818@1|root,COG2818@2|Bacteria,1R9X5@1224|Proteobacteria,1S25K@1236|Gammaproteobacteria,1X6KR@135614|Xanthomonadales 135614|Xanthomonadales L Methyladenine glycosylase - - 3.2.2.20 ko:K01246 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Adenine_glyco QTD1_k127_5446380_2 1123073.KB899242_gene1068 4.045e-34 143.0 2905E@1|root,2ZMVA@2|Bacteria,1REVI@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - Phenol_MetA_deg QTD1_k127_5457691_3 1123392.AQWL01000003_gene148 9.621e-42 156.0 COG0378@1|root,COG0378@2|Bacteria,1MVBD@1224|Proteobacteria,2VJKH@28216|Betaproteobacteria,1KSKW@119069|Hydrogenophilales 119069|Hydrogenophilales KO CobW/HypB/UreG, nucleotide-binding domain - - - - - - - - - - - - cobW QTD1_k127_5457691_4 243159.AFE_3289 9.043e-17 86.0 COG0298@1|root,COG0298@2|Bacteria,1N76Y@1224|Proteobacteria,1SCGX@1236|Gammaproteobacteria,2NDAQ@225057|Acidithiobacillales 225057|Acidithiobacillales O PFAM hydrogenase expression formation protein (HUPF HYPC) - - - ko:K04653 - - - - ko00000 - - - HupF_HypC QTD1_k127_5457691_1 1244869.H261_17353 2.971e-170 543.0 COG0409@1|root,COG0409@2|Bacteria,1MU1F@1224|Proteobacteria,2TSE4@28211|Alphaproteobacteria,2JQUT@204441|Rhodospirillales 204441|Rhodospirillales O Belongs to the HypD family hypD - - ko:K04654 - - - - ko00000 - - - HypD QTD1_k127_5457691_0 1121033.AUCF01000019_gene3701 1.67e-203 660.0 COG0223@1|root,COG1024@1|root,COG0223@2|Bacteria,COG1024@2|Bacteria,1MWYJ@1224|Proteobacteria,2U064@28211|Alphaproteobacteria,2JVQ0@204441|Rhodospirillales 204441|Rhodospirillales IJ Belongs to the enoyl-CoA hydratase isomerase family - - - ko:K19640 - - - - ko00000,ko02022 - - - ECH_1,Formyl_trans_C,Formyl_trans_N QTD1_k127_5457691_2 396588.Tgr7_1276 7.419e-92 313.0 COG0068@1|root,COG0068@2|Bacteria,1MVP8@1224|Proteobacteria,1RP08@1236|Gammaproteobacteria,1WX2T@135613|Chromatiales 135613|Chromatiales O Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide - - - ko:K04656 - - - - ko00000 - - - Acylphosphatase,Sua5_yciO_yrdC,zf-HYPF QTD1_k127_547856_1 1415780.JPOG01000001_gene1732 1.239e-149 499.0 COG1450@1|root,COG1450@2|Bacteria,1MUUA@1224|Proteobacteria,1RPJS@1236|Gammaproteobacteria,1X4RY@135614|Xanthomonadales 135614|Xanthomonadales NU secretion system protein xcsD - - ko:K02453 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - Secretin,Secretin_N QTD1_k127_547856_0 519989.ECTPHS_04334 3.467e-174 558.0 COG2804@1|root,COG2804@2|Bacteria,1MU7V@1224|Proteobacteria,1RMBS@1236|Gammaproteobacteria,1WX5F@135613|Chromatiales 135613|Chromatiales NU PFAM Type II secretion system protein E - - - ko:K02454 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - T2SSE,T2SSE_N QTD1_k127_5487715_2 1038867.AXAY01000022_gene2806 9.275e-93 316.0 COG0277@1|root,COG0277@2|Bacteria,1MUPW@1224|Proteobacteria,2TUNK@28211|Alphaproteobacteria,3JSHP@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria C Berberine and berberine like - - - - - - - - - - - - BBE,FAD_binding_4 QTD1_k127_5487715_0 765913.ThidrDRAFT_0399 6.376e-134 446.0 COG0332@1|root,COG0332@2|Bacteria,1MU9N@1224|Proteobacteria,1RNIR@1236|Gammaproteobacteria,1WWWT@135613|Chromatiales 135613|Chromatiales I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids fabH - 2.3.1.180 ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00082,M00083 R10707 RC00004,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - ACP_syn_III,ACP_syn_III_C QTD1_k127_5487715_1 765914.ThisiDRAFT_0354 1.311e-97 332.0 COG0416@1|root,COG0416@2|Bacteria,1MVM3@1224|Proteobacteria,1RM7R@1236|Gammaproteobacteria,1WW6R@135613|Chromatiales 135613|Chromatiales I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA plsX - 2.3.1.15 ko:K03621 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R00851,R09380 RC00004,RC00039,RC00041 ko00000,ko00001,ko00002,ko01000,ko01004 - - - FA_synthesis QTD1_k127_5487715_5 1249627.D779_1454 7.099e-21 93.0 COG0333@1|root,COG0333@2|Bacteria,1N6RF@1224|Proteobacteria,1SC9G@1236|Gammaproteobacteria,1WZ7D@135613|Chromatiales 135613|Chromatiales J Belongs to the bacterial ribosomal protein bL32 family rpmF - - ko:K02911 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011,ko03029 - - - Ribosomal_L32p QTD1_k127_5487715_6 713586.KB900536_gene792 3.709e-14 79.0 COG1399@1|root,COG1399@2|Bacteria,1PC30@1224|Proteobacteria,1SWVB@1236|Gammaproteobacteria,1WZ8T@135613|Chromatiales 135613|Chromatiales S Uncharacterized ACR, COG1399 - - - ko:K07040 - - - - ko00000 - - - DUF177 QTD1_k127_5487715_3 666685.R2APBS1_1442 3.014e-59 211.0 COG0424@1|root,COG0424@2|Bacteria,1RDA9@1224|Proteobacteria,1S3TQ@1236|Gammaproteobacteria,1X6HJ@135614|Xanthomonadales 135614|Xanthomonadales D Maf-like protein - - - ko:K06287 - - - - ko00000 - - - Maf QTD1_k127_5487715_4 323261.Noc_2844 3.564e-44 166.0 COG0564@1|root,COG0564@2|Bacteria,1MVDX@1224|Proteobacteria,1RPAN@1236|Gammaproteobacteria,1WW19@135613|Chromatiales 135613|Chromatiales J Responsible for synthesis of pseudouridine from uracil - - 5.4.99.24 ko:K06179 - - - - ko00000,ko01000,ko03009 - - - PseudoU_synth_2,S4 QTD1_k127_5488026_16 1385517.N800_13175 2.98e-31 134.0 COG0810@1|root,COG0810@2|Bacteria,1R65W@1224|Proteobacteria,1S133@1236|Gammaproteobacteria,1X6T0@135614|Xanthomonadales 135614|Xanthomonadales M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - - - - - - - - - - - QTD1_k127_5488026_12 1385517.N800_13170 3.786e-47 177.0 COG0848@1|root,COG0848@2|Bacteria,1RENY@1224|Proteobacteria,1S3TB@1236|Gammaproteobacteria,1X7V1@135614|Xanthomonadales 135614|Xanthomonadales U Biopolymer transport protein ExbD/TolR - - - - - - - - - - - - ExbD QTD1_k127_5488026_14 1385517.N800_13165 2.512e-35 142.0 COG0848@1|root,COG0848@2|Bacteria,1RHI8@1224|Proteobacteria,1S6FK@1236|Gammaproteobacteria,1X8N4@135614|Xanthomonadales 135614|Xanthomonadales U Biopolymer transport protein ExbD/TolR - - - - - - - - - - - - ExbD QTD1_k127_5488026_6 1385517.N800_13160 5.961e-73 252.0 COG0811@1|root,COG0811@2|Bacteria,1PKF8@1224|Proteobacteria,1RRWP@1236|Gammaproteobacteria,1X605@135614|Xanthomonadales 135614|Xanthomonadales U MotA/TolQ/ExbB proton channel family - - - - - - - - - - - - MotA_ExbB QTD1_k127_5488026_15 443143.GM18_4032 2.833e-33 143.0 COG0457@1|root,COG0457@2|Bacteria,1N1J2@1224|Proteobacteria,42ZHG@68525|delta/epsilon subdivisions,2WV2W@28221|Deltaproteobacteria,43UR6@69541|Desulfuromonadales 28221|Deltaproteobacteria S Tetratricopeptide repeat - - - - - - - - - - - - - QTD1_k127_5488026_0 1232410.KI421425_gene1549 3.592e-289 922.0 COG4105@1|root,COG4105@2|Bacteria,1QVQ9@1224|Proteobacteria,43CT2@68525|delta/epsilon subdivisions,2X80K@28221|Deltaproteobacteria,43TUA@69541|Desulfuromonadales 28221|Deltaproteobacteria S Tetratricopeptide repeat - - - - - - - - - - - - TPR_16,TPR_6 QTD1_k127_5488026_1 1232410.KI421425_gene1550 1.939e-207 664.0 COG0457@1|root,COG0457@2|Bacteria,1MXSS@1224|Proteobacteria,42Z0Q@68525|delta/epsilon subdivisions,2WU0G@28221|Deltaproteobacteria,43T6R@69541|Desulfuromonadales 28221|Deltaproteobacteria S Tetratricopeptide repeat - - - - - - - - - - - - - QTD1_k127_5488026_10 1385517.N800_13135 4.129e-59 216.0 2B4XH@1|root,32REP@2|Bacteria,1RJ9F@1224|Proteobacteria,1T0SV@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_5488026_8 1444711.CCJF01000005_gene196 5.789e-70 250.0 COG1793@1|root,COG3285@1|root,COG1793@2|Bacteria,COG3285@2|Bacteria,2JFD0@204428|Chlamydiae 204428|Chlamydiae L ATP dependent DNA ligase C terminal region - - 6.5.1.1 ko:K01971 ko03450,map03450 - R00381 RC00005 ko00000,ko00001,ko01000,ko03400 - - - DNA_ligase_A_C,DNA_ligase_A_M,LigD_N QTD1_k127_5488026_2 1282362.AEAC466_16885 1.873e-152 507.0 COG1629@1|root,COG4771@2|Bacteria,1QEUA@1224|Proteobacteria,2TV7S@28211|Alphaproteobacteria,2KF6M@204458|Caulobacterales 204458|Caulobacterales P TonB-dependent receptor - - - - - - - - - - - - OMP_b-brl_3,Plug QTD1_k127_5488026_19 38727.Pavir.Da00725.1.p 3.998e-13 82.0 KOG0198@1|root,KOG0198@2759|Eukaryota,37Q1R@33090|Viridiplantae,3G98W@35493|Streptophyta,3KU19@4447|Liliopsida,3IBHZ@38820|Poales 35493|Streptophyta T Protein kinase domain - - 2.7.11.25 ko:K13414,ko:K20605 ko04016,ko04626,map04016,map04626 - - - ko00000,ko00001,ko01000,ko01001 - - - Pkinase QTD1_k127_5488026_11 194867.ALBQ01000053_gene1881 1.974e-55 198.0 COG2259@1|root,COG2259@2|Bacteria 2|Bacteria S methylamine metabolic process - - - ko:K15977 - - - - ko00000 - - - DoxX QTD1_k127_5488026_17 670292.JH26_18515 6.931e-19 91.0 2ETWY@1|root,33ME5@2|Bacteria,1N72E@1224|Proteobacteria,2UIFQ@28211|Alphaproteobacteria 28211|Alphaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_5488026_3 1469613.JT55_10940 1.609e-142 464.0 COG0477@1|root,COG2814@2|Bacteria,1MXPM@1224|Proteobacteria,2TSB9@28211|Alphaproteobacteria 28211|Alphaproteobacteria EGP Major facilitator Superfamily - - - - - - - - - - - - MFS_1,Sugar_tr QTD1_k127_5488026_7 266835.14026248 2.538e-70 241.0 COG3467@1|root,COG3467@2|Bacteria,1RAZD@1224|Proteobacteria,2TXIF@28211|Alphaproteobacteria 28211|Alphaproteobacteria S Pfam:Pyridox_oxidase - - - - - - - - - - - - Putative_PNPOx QTD1_k127_5488026_4 709797.CSIRO_2529 6.732e-109 364.0 COG0500@1|root,COG2226@2|Bacteria,1PPKI@1224|Proteobacteria,2TRIB@28211|Alphaproteobacteria,3JRP5@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria Q ubiE/COQ5 methyltransferase family MA20_37085 - - - - - - - - - - - Methyltransf_11,Methyltransf_25 QTD1_k127_5488026_9 667632.KB890203_gene2909 1.352e-61 219.0 COG0671@1|root,COG0671@2|Bacteria,1PSMA@1224|Proteobacteria,2WE2V@28216|Betaproteobacteria,1KBHR@119060|Burkholderiaceae 28216|Betaproteobacteria I Acid phosphatase homologues - - - - - - - - - - - - PAP2 QTD1_k127_5488026_5 1122604.JONR01000042_gene3471 3.541e-83 285.0 2B47E@1|root,31WYM@2|Bacteria,1R5Q0@1224|Proteobacteria,1SFW8@1236|Gammaproteobacteria,1XB98@135614|Xanthomonadales 135614|Xanthomonadales - - - - - - - - - - - - - - - QTD1_k127_5488026_13 765911.Thivi_1741 9.495e-37 149.0 COG3907@1|root,COG3907@2|Bacteria,1QV68@1224|Proteobacteria,1TIBV@1236|Gammaproteobacteria,1WW5N@135613|Chromatiales 135613|Chromatiales S PFAM Phosphatidic acid phosphatase type 2 haloperoxidase - - - - - - - - - - - - PAP2 QTD1_k127_551335_4 1458275.AZ34_02725 2.831e-25 112.0 COG4976@1|root,COG4976@2|Bacteria,1QXJ5@1224|Proteobacteria,2VJW6@28216|Betaproteobacteria,4AAVX@80864|Comamonadaceae 28216|Betaproteobacteria S Methyltransferase type 11 - - - - - - - - - - - - Methyltransf_12,Methyltransf_23,Methyltransf_25 QTD1_k127_551335_0 1380394.JADL01000004_gene5852 4.677e-195 623.0 COG1960@1|root,COG1960@2|Bacteria,1MU20@1224|Proteobacteria,2TQU2@28211|Alphaproteobacteria,2JPAH@204441|Rhodospirillales 204441|Rhodospirillales I Acyl-CoA dehydrogenase, C-terminal domain - - - ko:K09456 - - - - ko00000 - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M QTD1_k127_551335_3 1158292.JPOE01000005_gene724 7.695e-26 109.0 2DPTK@1|root,333BS@2|Bacteria,1QVH8@1224|Proteobacteria,2VWD4@28216|Betaproteobacteria,1KP2T@119065|unclassified Burkholderiales 28216|Betaproteobacteria - - - - - - - - - - - - - - YXWGXW QTD1_k127_551335_2 652103.Rpdx1_0762 3.843e-67 234.0 COG1881@1|root,COG1881@2|Bacteria,1N0Y4@1224|Proteobacteria,2U9HZ@28211|Alphaproteobacteria,3K0YK@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria S Phosphatidylethanolamine-binding protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044424,GO:0044464 - ko:K06910 - - - - ko00000 - - - PBP QTD1_k127_551335_1 857087.Metme_1823 8.385e-81 275.0 COG0621@1|root,COG0621@2|Bacteria,1MU7N@1224|Proteobacteria,1RN46@1236|Gammaproteobacteria,1XE6C@135618|Methylococcales 135618|Methylococcales J Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 rimO - 2.8.4.4 ko:K14441 - - R10652 RC00003,RC03217 ko00000,ko01000,ko03009 - - - Radical_SAM,UPF0004 QTD1_k127_5535252_5 745411.B3C1_15352 7.4e-76 258.0 COG1136@1|root,COG1136@2|Bacteria,1MU45@1224|Proteobacteria,1RNUJ@1236|Gammaproteobacteria,1J8FH@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria V COG1136 ABC-type antimicrobial peptide transport system, ATPase component - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran QTD1_k127_5535252_3 1384054.N790_08370 2.809e-97 333.0 COG0845@1|root,COG0845@2|Bacteria,1NQDN@1224|Proteobacteria,1RRFE@1236|Gammaproteobacteria,1X3QX@135614|Xanthomonadales 135614|Xanthomonadales M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family ybjY - - ko:K02005 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 QTD1_k127_5535252_10 765910.MARPU_10495 1.511e-05 58.0 2DQWF@1|root,3392H@2|Bacteria,1N93V@1224|Proteobacteria,1SFNS@1236|Gammaproteobacteria,1WZ6Y@135613|Chromatiales 135613|Chromatiales S Protein of unknown function (DUF2934) - - - - - - - - - - - - DUF2934 QTD1_k127_5535252_4 396588.Tgr7_0552 9.734e-97 328.0 COG1477@1|root,COG1477@2|Bacteria,1MW6K@1224|Proteobacteria,1RNMZ@1236|Gammaproteobacteria,1WWAK@135613|Chromatiales 135613|Chromatiales H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein - - 2.7.1.180 ko:K03734 - - - - ko00000,ko01000 - - - ApbE QTD1_k127_5535252_8 1235457.C404_02065 4.084e-27 119.0 2E9SI@1|root,333YQ@2|Bacteria,1RI7T@1224|Proteobacteria,2VXBI@28216|Betaproteobacteria,1KHJN@119060|Burkholderiaceae 28216|Betaproteobacteria - - - - - - - - - - - - - - PsiF_repeat QTD1_k127_5535252_1 608538.HTH_0806 1.867e-139 453.0 COG2041@1|root,COG2041@2|Bacteria,2G4KU@200783|Aquificae 200783|Aquificae S Mo-co oxidoreductase dimerisation domain - - - - - - - - - - - - Mo-co_dimer,Oxidored_molyb QTD1_k127_5535252_9 608538.HTH_0807 6.937e-19 97.0 COG2010@1|root,COG2010@2|Bacteria,2G56V@200783|Aquificae 200783|Aquificae C Cytochrome c - - - - - - - - - - - - - QTD1_k127_5535252_7 1366050.N234_19850 7.775e-46 169.0 COG0346@1|root,COG0346@2|Bacteria,1RHD4@1224|Proteobacteria,2VSJM@28216|Betaproteobacteria,1K7MX@119060|Burkholderiaceae 28216|Betaproteobacteria E PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - ko:K08234 - - - - ko00000 - - - Glyoxalase QTD1_k127_5535252_2 509190.Cseg_0377 1.308e-121 398.0 COG1028@1|root,COG1028@2|Bacteria,1MUSQ@1224|Proteobacteria,2TTJC@28211|Alphaproteobacteria,2KFGY@204458|Caulobacterales 204458|Caulobacterales IQ Enoyl-(Acyl carrier protein) reductase - - - ko:K13775 ko00281,map00281 - R08087,R08096,R10125,R10126 RC00080,RC00087 ko00000,ko00001 - - - adh_short QTD1_k127_5535252_0 1120999.JONM01000003_gene2560 4.629e-141 457.0 COG2130@1|root,COG2130@2|Bacteria,1MUC2@1224|Proteobacteria,2VIE7@28216|Betaproteobacteria,2KSYC@206351|Neisseriales 206351|Neisseriales C N-terminal domain of oxidoreductase - - 1.1.1.1 ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 - R00623,R00754,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310 RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273 ko00000,ko00001,ko01000 - - - ADH_N_2,ADH_zinc_N QTD1_k127_5535252_6 391008.Smal_3375 1.472e-57 211.0 COG3917@1|root,COG3917@2|Bacteria,1MWB9@1224|Proteobacteria,1S4K8@1236|Gammaproteobacteria,1XBXZ@135614|Xanthomonadales 135614|Xanthomonadales Q DSBA-like thioredoxin domain - - - - - - - - - - - - DSBA QTD1_k127_5554000_2 935567.JAES01000011_gene1152 8.591e-42 174.0 COG0109@1|root,COG0109@2|Bacteria,1MW3S@1224|Proteobacteria,1RNHC@1236|Gammaproteobacteria,1X3GV@135614|Xanthomonadales 135614|Xanthomonadales O Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group cyoE GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 ko:K02257 ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714 M00154 R07411 RC01786 ko00000,ko00001,ko00002,ko01000,ko01006,ko03029 - - - UbiA QTD1_k127_5554000_1 713586.KB900536_gene1812 2.207e-68 253.0 COG1612@1|root,COG1612@2|Bacteria,1MVJ4@1224|Proteobacteria,1RQWB@1236|Gammaproteobacteria,1WZSA@135613|Chromatiales 135613|Chromatiales O cytochrome oxidase assembly - - - ko:K02259 ko00190,ko00860,ko01100,ko01110,ko02020,ko04714,map00190,map00860,map01100,map01110,map02020,map04714 M00154 R07412 RC00769 ko00000,ko00001,ko00002,ko03029 3.D.4.4 - - COX15-CtaA QTD1_k127_5554000_4 713586.KB900536_gene1813 2.397e-26 116.0 COG1999@1|root,COG1999@2|Bacteria,1N6R6@1224|Proteobacteria,1SWXH@1236|Gammaproteobacteria,1X1CE@135613|Chromatiales 135613|Chromatiales S signal sequence binding - - - - - - - - - - - - - QTD1_k127_5554000_3 1122603.ATVI01000001_gene1925 5.81e-37 149.0 COG3346@1|root,COG3346@2|Bacteria,1MZUH@1224|Proteobacteria,1S8S0@1236|Gammaproteobacteria,1X6QG@135614|Xanthomonadales 135614|Xanthomonadales S SURF1-like protein - - - - - - - - - - - - SURF1 QTD1_k127_5554000_5 243233.MCA0130 9.769e-11 66.0 2EGIJ@1|root,33AAQ@2|Bacteria,1NH9B@1224|Proteobacteria,1SGKJ@1236|Gammaproteobacteria,1XFSX@135618|Methylococcales 135618|Methylococcales S Protein of unknown function (DUF2909) - - - - - - - - - - - - DUF2909 QTD1_k127_5554000_0 1234364.AMSF01000080_gene3027 1.893e-96 320.0 COG1845@1|root,COG1845@2|Bacteria,1MUCK@1224|Proteobacteria,1RN9D@1236|Gammaproteobacteria,1X3ZT@135614|Xanthomonadales 135614|Xanthomonadales C Heme copper-type cytochrome quinol oxidase subunit 3 cox3 - 1.9.3.1 ko:K02276 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.4,3.D.4.6 - - COX3 QTD1_k127_5554053_1 1123257.AUFV01000011_gene3165 1.083e-42 162.0 COG1670@1|root,COG1670@2|Bacteria,1N18Y@1224|Proteobacteria,1S8ZQ@1236|Gammaproteobacteria,1X6VH@135614|Xanthomonadales 135614|Xanthomonadales J Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_3 QTD1_k127_5554053_0 861299.J421_5944 3.984e-212 674.0 COG0624@1|root,COG0624@2|Bacteria 2|Bacteria E succinyl-diaminopimelate desuccinylase activity - - - - - - - - - - - - M20_dimer,Peptidase_M20 QTD1_k127_5554053_3 765914.ThisiDRAFT_1797 1.131e-14 84.0 2DP0A@1|root,3300Q@2|Bacteria,1N78Y@1224|Proteobacteria,1SH09@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Sporulation related domain - - - - - - - - - - - - SPOR QTD1_k127_5554053_2 1500893.JQNB01000001_gene1523 7.638e-34 139.0 COG1521@1|root,COG1521@2|Bacteria,1MUYA@1224|Proteobacteria,1S99V@1236|Gammaproteobacteria,1X5C9@135614|Xanthomonadales 135614|Xanthomonadales F Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis coaX - 2.7.1.33 ko:K03525 ko00770,ko01100,map00770,map01100 M00120 R02971,R03018,R04391 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - Pan_kinase QTD1_k127_557816_0 105559.Nwat_2196 1.75e-128 424.0 COG0342@1|root,COG0342@2|Bacteria,1MV5U@1224|Proteobacteria,1RMIQ@1236|Gammaproteobacteria,1WX1G@135613|Chromatiales 135613|Chromatiales U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA secD - - ko:K03072 ko03060,ko03070,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 2.A.6.4,3.A.5.2,3.A.5.7 - - SecD-TM1,SecD_SecF,Sec_GG QTD1_k127_557816_1 1123368.AUIS01000025_gene1496 1.991e-76 266.0 COG0341@1|root,COG0341@2|Bacteria,1MU74@1224|Proteobacteria,1RNTY@1236|Gammaproteobacteria,2NCB4@225057|Acidithiobacillales 225057|Acidithiobacillales U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA secF - - ko:K03074 ko03060,ko03070,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 2.A.6.4,3.A.5.2,3.A.5.7 - - SecD_SecF,Sec_GG QTD1_k127_557816_2 287.DR97_2620 1.566e-35 138.0 COG0861@1|root,COG0861@2|Bacteria,1MWC9@1224|Proteobacteria,1T1GE@1236|Gammaproteobacteria,1YE2W@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria P Integral membrane protein TerC family ygdQ GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - - - - - - - - - - TerC QTD1_k127_5625730_1 543913.D521_2029 7.202e-41 164.0 2DM6D@1|root,31WQ8@2|Bacteria,1MZ7P@1224|Proteobacteria,2VUHB@28216|Betaproteobacteria 28216|Betaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_5625730_0 1163409.UUA_14941 1.416e-265 843.0 COG1297@1|root,COG1297@2|Bacteria,1N7SK@1224|Proteobacteria,1RNC8@1236|Gammaproteobacteria,1X4Q2@135614|Xanthomonadales 135614|Xanthomonadales S transporter oliA - - - - - - - - - - - OPT QTD1_k127_5625730_4 509190.Cseg_0864 4.712e-24 112.0 COG1950@1|root,COG1950@2|Bacteria,1N1DF@1224|Proteobacteria,2UDEK@28211|Alphaproteobacteria,2KGZA@204458|Caulobacterales 204458|Caulobacterales S PFAM Membrane protein of - - - ko:K08972 - - - - ko00000 - - - Phage_holin_4_2 QTD1_k127_5625730_5 479435.Kfla_2259 9.621e-05 51.0 COG3832@1|root,COG3832@2|Bacteria,2ISCU@201174|Actinobacteria,4DVPU@85009|Propionibacteriales 201174|Actinobacteria S Activator of Hsp90 ATPase homolog 1-like protein - - - - - - - - - - - - AHSA1 QTD1_k127_5625730_2 316056.RPC_0077 6.484e-29 121.0 COG3788@1|root,COG3788@2|Bacteria,1NBHH@1224|Proteobacteria,2UA0K@28211|Alphaproteobacteria,3JYVE@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria S MAPEG family - - 2.5.1.18 ko:K00799 ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418 - R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905 RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944 ko00000,ko00001,ko01000,ko02000 1.A.12.2.2,1.A.12.3.2 - - MAPEG QTD1_k127_5625730_3 926569.ANT_30870 9.909e-29 117.0 COG0586@1|root,COG0586@2|Bacteria,2G79V@200795|Chloroflexi 200795|Chloroflexi S SNARE associated Golgi protein - - - ko:K03975 - - - - ko00000 - - - SNARE_assoc QTD1_k127_5657641_0 1458357.BG58_15425 1.479e-188 598.0 COG3493@1|root,COG3493@2|Bacteria,1NKCA@1224|Proteobacteria,2VMPQ@28216|Betaproteobacteria,1K3JB@119060|Burkholderiaceae 28216|Betaproteobacteria C Citrate carrier protein cimH - - - - - - - - - - - 2HCT QTD1_k127_5657641_1 748247.AZKH_p0320 1.942e-152 496.0 COG0642@1|root,COG2770@1|root,COG2205@2|Bacteria,COG2770@2|Bacteria,1N17V@1224|Proteobacteria,2VK7C@28216|Betaproteobacteria 28216|Betaproteobacteria T histidine kinase HAMP region domain protein baeS - 2.7.13.3 ko:K07642 ko02020,map02020 M00450,M00645,M00646,M00648 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HAMP,HATPase_c,HisKA QTD1_k127_5657641_2 748247.AZKH_p0319 3.07e-95 317.0 COG0745@1|root,COG0745@2|Bacteria,1MU67@1224|Proteobacteria,2VHHB@28216|Betaproteobacteria,2KVAP@206389|Rhodocyclales 28216|Betaproteobacteria K COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - ko:K07665 ko02020,map02020 M00452,M00745 - - ko00000,ko00001,ko00002,ko01504,ko02022 - - - Response_reg,Trans_reg_C QTD1_k127_5657641_4 1122604.JONR01000011_gene3738 9.871e-73 258.0 COG3391@1|root,COG3391@2|Bacteria,1RFSR@1224|Proteobacteria,1SJKQ@1236|Gammaproteobacteria,1XCFR@135614|Xanthomonadales 135614|Xanthomonadales S amine dehydrogenase activity - - - - - - - - - - - - - QTD1_k127_5657641_6 1396418.BATQ01000091_gene5817 1.045e-05 51.0 COG0500@1|root,COG2226@2|Bacteria,46TDK@74201|Verrucomicrobia,2IUIX@203494|Verrucomicrobiae 203494|Verrucomicrobiae Q Methyltransferase domain - - - - - - - - - - - - Methyltransf_11 QTD1_k127_5657641_5 1123073.KB899241_gene2419 1.729e-56 208.0 COG4773@1|root,COG4773@2|Bacteria 1123073.KB899241_gene2419|- P Receptor - - - - - - - - - - - - - QTD1_k127_5657641_3 1123073.KB899241_gene2420 1.615e-91 314.0 COG3391@1|root,COG3391@2|Bacteria,1MWUF@1224|Proteobacteria 1224|Proteobacteria T Belongs to the low molecular weight phosphotyrosine protein phosphatase family - - - - - - - - - - - - PQQ_2 QTD1_k127_5658490_1 1123073.KB899243_gene512 2.62e-103 350.0 COG0457@1|root,COG0457@2|Bacteria,1MVMG@1224|Proteobacteria,1RNVA@1236|Gammaproteobacteria,1X6C3@135614|Xanthomonadales 135614|Xanthomonadales S Putative 2OG-Fe(II) oxygenase - - - - - - - - - - - - 2OG-FeII_Oxy_5,TPR_16,TPR_19 QTD1_k127_5658490_2 861299.J421_1130 8.954e-70 244.0 COG2133@1|root,COG2133@2|Bacteria,1ZTW2@142182|Gemmatimonadetes 142182|Gemmatimonadetes G Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 QTD1_k127_5658490_3 1123073.KB899241_gene2382 1.383e-66 234.0 2CISN@1|root,2Z7MB@2|Bacteria,1MZKH@1224|Proteobacteria,1T8HQ@1236|Gammaproteobacteria,1XAR3@135614|Xanthomonadales 135614|Xanthomonadales S Gluconate 2-dehydrogenase subunit 3 - - - - - - - - - - - - Gluconate_2-dh3 QTD1_k127_5658490_0 1123073.KB899241_gene2383 3.797e-306 946.0 COG2303@1|root,COG2303@2|Bacteria,1MU3F@1224|Proteobacteria,1RPBQ@1236|Gammaproteobacteria,1X43N@135614|Xanthomonadales 135614|Xanthomonadales E PFAM GMC oxidoreductase - - - - - - - - - - - - DAO,GMC_oxred_C,GMC_oxred_N,NAD_binding_8 QTD1_k127_5658624_4 768671.ThimaDRAFT_0877 2.011e-44 169.0 COG2897@1|root,COG2897@2|Bacteria,1MW4B@1224|Proteobacteria,1RSQ3@1236|Gammaproteobacteria,1WY32@135613|Chromatiales 135613|Chromatiales P SMART Rhodanese domain protein - - 2.8.1.1,2.8.1.2 ko:K01011 ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122 - R01931,R03105,R03106 RC00214 ko00000,ko00001,ko01000 - - - Rhodanese QTD1_k127_5658624_0 502025.Hoch_0026 1.17e-216 693.0 COG1166@1|root,COG1166@2|Bacteria,1MU80@1224|Proteobacteria,42M2B@68525|delta/epsilon subdivisions,2WJDZ@28221|Deltaproteobacteria,2YTWQ@29|Myxococcales 28221|Deltaproteobacteria H Catalyzes the biosynthesis of agmatine from arginine speA - 4.1.1.19 ko:K01585 ko00330,ko01100,map00330,map01100 M00133 R00566 RC00299 ko00000,ko00001,ko00002,ko01000 - - - Orn_Arg_deC_N QTD1_k127_5658624_3 795666.MW7_0932 1.201e-57 217.0 COG2119@1|root,COG2119@2|Bacteria,1RDDV@1224|Proteobacteria,2VQ6X@28216|Betaproteobacteria,1K1C3@119060|Burkholderiaceae 28216|Betaproteobacteria S Uncharacterized protein family UPF0016 - - - - - - - - - - - - UPF0016 QTD1_k127_5658624_7 1260251.SPISAL_01110 5.588e-27 113.0 COG0724@1|root,COG0724@2|Bacteria,1N6VR@1224|Proteobacteria,1SCKA@1236|Gammaproteobacteria,1WZAJ@135613|Chromatiales 135613|Chromatiales S COG0724 RNA-binding proteins (RRM domain) - - - - - - - - - - - - RRM_1 QTD1_k127_5658624_2 414684.RC1_2752 2.69e-89 302.0 COG4798@1|root,COG4798@2|Bacteria,1RHGZ@1224|Proteobacteria,2U7R8@28211|Alphaproteobacteria,2JUQC@204441|Rhodospirillales 204441|Rhodospirillales S Methyltransferase - - - - - - - - - - - - - QTD1_k127_5658624_6 472759.Nhal_2073 2.648e-28 122.0 COG2135@1|root,COG2135@2|Bacteria,1RER4@1224|Proteobacteria,1S3AX@1236|Gammaproteobacteria,1X2H3@135613|Chromatiales 135613|Chromatiales S Belongs to the SOS response-associated peptidase family - - - - - - - - - - - - SRAP QTD1_k127_5658624_5 1123508.JH636456_gene127 2.812e-36 143.0 COG3467@1|root,COG3467@2|Bacteria 2|Bacteria T pyridoxamine 5'-phosphate - - - ko:K07005 - - - - ko00000 - - - Putative_PNPOx,Pyridox_ox_2 QTD1_k127_5658624_1 1532557.JL37_24075 6.611e-184 590.0 COG0210@1|root,COG0210@2|Bacteria,1MU0G@1224|Proteobacteria,2VM2H@28216|Betaproteobacteria,3T57X@506|Alcaligenaceae 28216|Betaproteobacteria L Superfamily I DNA and RNA helicases pcrA - 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - UvrD-helicase,UvrD_C QTD1_k127_5670371_13 1269813.ATUL01000007_gene2088 6.689e-27 119.0 COG5002@1|root,COG5002@2|Bacteria,1MWF3@1224|Proteobacteria,1RN0F@1236|Gammaproteobacteria,1WWCF@135613|Chromatiales 135613|Chromatiales T Histidine kinase - - 2.7.13.3 ko:K07636 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - DUF3329,HATPase_c,HisKA,PAS,PAS_8 QTD1_k127_5670371_4 1304275.C41B8_02157 4.871e-96 319.0 COG0745@1|root,COG0745@2|Bacteria,1MY2Z@1224|Proteobacteria,1RN41@1236|Gammaproteobacteria 1236|Gammaproteobacteria K phosphate regulon transcriptional regulatory protein PhoB phoB GO:0001098,GO:0001108,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042802,GO:0043254,GO:0044087,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - ko:K07657 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C QTD1_k127_5670371_8 713586.KB900536_gene638 6.516e-51 188.0 COG1214@1|root,COG1214@2|Bacteria,1MXPH@1224|Proteobacteria,1RPYX@1236|Gammaproteobacteria,1WX9X@135613|Chromatiales 135613|Chromatiales O PFAM Peptidase M22, glycoprotease - - - ko:K14742 - - - - ko00000,ko03016 - - - Peptidase_M22 QTD1_k127_5670371_2 1163408.UU9_14975 4.228e-180 586.0 COG1199@1|root,COG1199@2|Bacteria,1MVCU@1224|Proteobacteria,1RMNX@1236|Gammaproteobacteria,1X3ZE@135614|Xanthomonadales 135614|Xanthomonadales KL Helicase yoaA - 3.6.4.12 ko:K03722 - - - - ko00000,ko01000,ko03400 - - - DEAD,Helicase_C_2,ResIII QTD1_k127_5670371_0 1123253.AUBD01000005_gene111 2.528e-266 831.0 COG1274@1|root,COG1274@2|Bacteria,1MX3C@1224|Proteobacteria,1RNGQ@1236|Gammaproteobacteria,1X482@135614|Xanthomonadales 135614|Xanthomonadales H Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle pckG - 4.1.1.32 ko:K01596 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko03320,ko04068,ko04151,ko04152,ko04910,ko04920,ko04922,ko04931,ko04964,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map03320,map04068,map04151,map04152,map04910,map04920,map04922,map04931,map04964 M00003 R00431,R00726 RC00002,RC02741 ko00000,ko00001,ko00002,ko01000 - - - PEPCK_C,PEPCK_N QTD1_k127_5670371_7 640081.Dsui_0696 2.849e-66 240.0 COG1716@1|root,COG2114@1|root,COG1716@2|Bacteria,COG2114@2|Bacteria,1NAJG@1224|Proteobacteria,2VJW8@28216|Betaproteobacteria,2KWIW@206389|Rhodocyclales 206389|Rhodocyclales T Forkhead associated domain - - - - - - - - - - - - FHA,Guanylate_cyc QTD1_k127_5670371_3 396588.Tgr7_1852 1.445e-106 358.0 COG0042@1|root,COG0042@2|Bacteria,1MUY1@1224|Proteobacteria,1RN28@1236|Gammaproteobacteria,1WW7E@135613|Chromatiales 135613|Chromatiales J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs dusA - - ko:K05539 - - - - ko00000,ko01000,ko03016 - - - Dus QTD1_k127_5670371_11 1095769.CAHF01000011_gene2680 2.196e-32 134.0 COG0625@1|root,COG0625@2|Bacteria,1MY47@1224|Proteobacteria,2VQ03@28216|Betaproteobacteria 28216|Betaproteobacteria O Glutathione S-transferase - - 2.5.1.18 ko:K00799 ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418 - R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905 RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944 ko00000,ko00001,ko01000,ko02000 1.A.12.2.2,1.A.12.3.2 - - GST_C,GST_C_2,GST_C_3,GST_N,GST_N_3 QTD1_k127_5670371_1 1121377.KB906436_gene921 1.231e-202 661.0 COG2909@1|root,COG2909@2|Bacteria 2|Bacteria K trisaccharide binding - - - - - - - - - - - - AAA_16,GerE QTD1_k127_5670371_6 1500893.JQNB01000001_gene3217 5.18e-70 251.0 COG4313@1|root,COG4313@2|Bacteria,1R5Z9@1224|Proteobacteria,1TF0X@1236|Gammaproteobacteria,1X5FQ@135614|Xanthomonadales 135614|Xanthomonadales C Protein involved in meta-pathway of phenol degradation - - - - - - - - - - - - - QTD1_k127_5670371_9 234267.Acid_3612 6.527e-36 147.0 2E3HM@1|root,32W74@2|Bacteria,3Y85J@57723|Acidobacteria 57723|Acidobacteria - - - - - - - - - - - - - - - QTD1_k127_5670371_10 479435.Kfla_5813 1.2e-35 138.0 2DX9S@1|root,3441J@2|Bacteria,2IT0X@201174|Actinobacteria,4DS35@85009|Propionibacteriales 201174|Actinobacteria S Protein of unknown function (DUF4242) - - - - - - - - - - - - DUF4242 QTD1_k127_5670371_12 1123073.KB899241_gene2319 1.473e-30 124.0 2AGAH@1|root,316G1@2|Bacteria,1N2FZ@1224|Proteobacteria 1224|Proteobacteria S Protein of unknown function (DUF4242) - - - - - - - - - - - - DUF4242 QTD1_k127_5670371_5 1121377.KB906436_gene921 5.479e-88 308.0 COG2909@1|root,COG2909@2|Bacteria 2|Bacteria K trisaccharide binding - - - - - - - - - - - - AAA_16,GerE QTD1_k127_5672119_0 1049564.TevJSym_ar00350 3.388e-75 269.0 COG0484@1|root,COG0484@2|Bacteria,1Q629@1224|Proteobacteria,1RQ6X@1236|Gammaproteobacteria 1236|Gammaproteobacteria C heat shock protein binding - - - - - - - - - - - - - QTD1_k127_5672119_1 1245469.S58_30920 1.644e-51 208.0 COG4105@1|root,COG4571@1|root,COG4105@2|Bacteria,COG4571@2|Bacteria,1QYYT@1224|Proteobacteria,2TY1X@28211|Alphaproteobacteria,3K6VK@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria M Outer membrane protease - - - - - - - - - - - - Pom QTD1_k127_5675351_13 342113.DM82_146 8.448e-76 264.0 COG1116@1|root,COG1116@2|Bacteria,1MUDV@1224|Proteobacteria,2VHKA@28216|Betaproteobacteria,1K6D0@119060|Burkholderiaceae 28216|Betaproteobacteria P C-terminal AAA-associated domain - - - ko:K02049 - M00188 - - ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 - - AAA_assoc_C,ABC_tran QTD1_k127_5675351_23 1218076.BAYB01000009_gene1782 1.047e-26 115.0 COG1116@1|root,COG1116@2|Bacteria,1MUDV@1224|Proteobacteria,2VHKA@28216|Betaproteobacteria,1K6D0@119060|Burkholderiaceae 28216|Betaproteobacteria P C-terminal AAA-associated domain - - - ko:K02049 - M00188 - - ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 - - AAA_assoc_C,ABC_tran QTD1_k127_5675351_3 1304877.KI519399_gene1990 1.212e-244 766.0 COG0459@1|root,COG0459@2|Bacteria,1PMNK@1224|Proteobacteria,2TTPT@28211|Alphaproteobacteria,3JXCP@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions - GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 - - - ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 - - - Cpn60_TCP1 QTD1_k127_5675351_24 768671.ThimaDRAFT_0771 6.729e-19 93.0 COG5622@1|root,COG5622@2|Bacteria,1N6XP@1224|Proteobacteria,1SCD9@1236|Gammaproteobacteria,1WYG0@135613|Chromatiales 135613|Chromatiales N Host attachment protein - - - - - - - - - - - - Host_attach QTD1_k127_5675351_0 342113.DM82_5666 0.0 1038.0 COG0474@1|root,COG0474@2|Bacteria,1MUU5@1224|Proteobacteria,2VH2F@28216|Betaproteobacteria,1K29H@119060|Burkholderiaceae 28216|Betaproteobacteria P ATPase, P-type (transporting), HAD superfamily, subfamily IC - - 3.6.3.2 ko:K01531 - - - - ko00000,ko01000 3.A.3.4 - - Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase QTD1_k127_5675351_25 266117.Rxyl_2354 3.564e-17 89.0 COG1765@1|root,COG1765@2|Bacteria,2IG8A@201174|Actinobacteria,4CTH4@84995|Rubrobacteria 84995|Rubrobacteria O OsmC-like protein - - - - - - - - - - - - OsmC QTD1_k127_5675351_5 861299.J421_4070 1.762e-223 707.0 COG4993@1|root,COG4993@2|Bacteria 2|Bacteria G Dehydrogenase - - - - - - - - - - - - PQQ,PQQ_2 QTD1_k127_5675351_21 861299.J421_4072 3.567e-29 126.0 COG2010@1|root,COG2010@2|Bacteria,1ZU6E@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Cytochrome C oxidase, cbb3-type, subunit III - - - ko:K00406 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 - - ko00000,ko00001,ko00002 3.D.4.3 - - Cytochrome_CBB3,FixP_N QTD1_k127_5675351_7 1005048.CFU_0171 9.594e-186 598.0 COG1626@1|root,COG1626@2|Bacteria,1MWSM@1224|Proteobacteria,2VK7M@28216|Betaproteobacteria 28216|Betaproteobacteria G Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system treA - 3.2.1.28 ko:K01194 ko00500,ko01100,map00500,map01100 - R00010 RC00049 ko00000,ko00001,ko00537,ko01000 - GH37 - Trehalase QTD1_k127_5675351_8 760117.JN27_18465 1.981e-180 574.0 COG0738@1|root,COG0738@2|Bacteria,1MXDC@1224|Proteobacteria,2VN8R@28216|Betaproteobacteria,4762I@75682|Oxalobacteraceae 28216|Betaproteobacteria G Major Facilitator Superfamily gluP - - ko:K02429 - - - - ko00000,ko02000 2.A.1.7 - - MFS_1 QTD1_k127_5675351_6 391600.ABRU01000005_gene1699 3.229e-198 647.0 COG1505@1|root,COG1505@2|Bacteria,1NZ7N@1224|Proteobacteria,2TTAX@28211|Alphaproteobacteria,2KFFQ@204458|Caulobacterales 204458|Caulobacterales E peptidase S9A prolyl oligopeptidase domain protein beta-propeller - - 3.4.21.26 ko:K01322 ko04614,map04614 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S9,Peptidase_S9_N QTD1_k127_5675351_20 1040986.ATYO01000012_gene5230 1.624e-34 143.0 COG3758@1|root,COG3758@2|Bacteria,1RH9G@1224|Proteobacteria,2U9WU@28211|Alphaproteobacteria,43KRH@69277|Phyllobacteriaceae 28211|Alphaproteobacteria S HutD - - - ko:K09975 - - - - ko00000 - - - HutD QTD1_k127_5675351_15 1218075.BAYA01000003_gene592 7.304e-69 240.0 COG1028@1|root,COG1028@2|Bacteria,1N8G3@1224|Proteobacteria,2VI05@28216|Betaproteobacteria,1K4UQ@119060|Burkholderiaceae 28216|Betaproteobacteria IQ Belongs to the short-chain dehydrogenases reductases (SDR) family - - - - - - - - - - - - adh_short QTD1_k127_5675351_11 1415780.JPOG01000001_gene285 1.802e-114 383.0 COG1741@1|root,COG1741@2|Bacteria,1MWIP@1224|Proteobacteria,1RS05@1236|Gammaproteobacteria,1X3XC@135614|Xanthomonadales 135614|Xanthomonadales S Belongs to the pirin family - - - ko:K06911 - - - - ko00000 - - - Pirin,Pirin_C QTD1_k127_5675351_18 1163407.UU7_04867 6.064e-53 190.0 COG1765@1|root,COG1765@2|Bacteria,1N2BT@1224|Proteobacteria,1SAV1@1236|Gammaproteobacteria,1X7RH@135614|Xanthomonadales 135614|Xanthomonadales O redox protein, regulator of disulfide bond formation - - - ko:K07397 - - - - ko00000 - - - OsmC QTD1_k127_5675351_16 1346791.M529_03360 1.714e-65 228.0 COG3548@1|root,COG3548@2|Bacteria,1R9WQ@1224|Proteobacteria,2U7RR@28211|Alphaproteobacteria,2K51K@204457|Sphingomonadales 204457|Sphingomonadales S Protein of unknown function (DUF1211) - - - - - - - - - - - - DUF1211 QTD1_k127_5675351_4 1123257.AUFV01000003_gene820 2.249e-226 715.0 COG0365@1|root,COG0365@2|Bacteria,1MUF5@1224|Proteobacteria,1RNHN@1236|Gammaproteobacteria,1X509@135614|Xanthomonadales 135614|Xanthomonadales I AMP-binding enzyme C-terminal domain - - 6.2.1.1 ko:K01895 ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200 M00357 R00235,R00236,R00316,R00926,R01354 RC00004,RC00012,RC00043,RC00070,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000,ko01004 - - - AMP-binding,AMP-binding_C QTD1_k127_5675351_22 658612.MD26_21915 8.797e-27 117.0 2DNZS@1|root,32ZYX@2|Bacteria,1QUTX@1224|Proteobacteria,1T3UY@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Methylamine utilisation protein MauE - - - - - - - - - - - - MauE QTD1_k127_5675351_17 159450.NH14_25005 3.517e-59 218.0 COG0526@1|root,COG0526@2|Bacteria,1R3WA@1224|Proteobacteria,2VQKN@28216|Betaproteobacteria,1K507@119060|Burkholderiaceae 28216|Betaproteobacteria CO methylamine dehydrogenase accessory protein MauD mauD - - - - - - - - - - - AhpC-TSA,Thioredoxin_2 QTD1_k127_5675351_19 627192.SLG_06480 7.169e-53 194.0 COG4122@1|root,COG4122@2|Bacteria,1N57D@1224|Proteobacteria,2U6NA@28211|Alphaproteobacteria,2KCBH@204457|Sphingomonadales 204457|Sphingomonadales S O-methyltransferase - - - - - - - - - - - - Methyltransf_24 QTD1_k127_5675351_14 1121033.AUCF01000001_gene1954 4.151e-73 268.0 COG2872@1|root,COG2872@2|Bacteria,1MY0P@1224|Proteobacteria,2TRRW@28211|Alphaproteobacteria,2JPPZ@204441|Rhodospirillales 204441|Rhodospirillales S metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain - - - ko:K07050 - - - - ko00000,ko01000,ko03016 - - - tRNA-synt_2c,tRNA_SAD QTD1_k127_5675351_12 381666.H16_A2781 9.334e-83 284.0 COG0384@1|root,COG0384@2|Bacteria,1MUAS@1224|Proteobacteria,2VHM0@28216|Betaproteobacteria,1K3NS@119060|Burkholderiaceae 28216|Betaproteobacteria S phenazine biosynthesis protein PhzF family phzF_1 - - - - - - - - - - - PhzC-PhzF QTD1_k127_5675351_1 1122604.JONR01000035_gene347 2.129e-298 927.0 COG2936@1|root,COG2936@2|Bacteria,1MVA8@1224|Proteobacteria,1S1KH@1236|Gammaproteobacteria,1X3PX@135614|Xanthomonadales 135614|Xanthomonadales S Glutaryl-7-ACA acylase gaa - - ko:K06978 - - - - ko00000 - - - PepX_C,Peptidase_S15 QTD1_k127_5675351_2 748247.AZKH_p0144 5.437e-274 850.0 COG5598@1|root,COG5598@2|Bacteria,1MWJN@1224|Proteobacteria 1224|Proteobacteria H trimethylamine methyltransferase mttB2 - 2.1.1.250 ko:K14083 ko00680,ko01120,ko01200,map00680,map01120,map01200 M00563 R09124,R10016 RC00035,RC00732,RC01144,RC02984 ko00000,ko00001,ko00002,ko01000 - - - MTTB QTD1_k127_5675351_10 485913.Krac_1179 2.822e-153 518.0 COG0673@1|root,COG0673@2|Bacteria,2G8BH@200795|Chloroflexi 200795|Chloroflexi S Oxidoreductase family, C-terminal alpha/beta domain - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C QTD1_k127_5675351_9 1127673.GLIP_3995 9.549e-179 575.0 COG2270@1|root,COG2270@2|Bacteria,1QV57@1224|Proteobacteria,1T28V@1236|Gammaproteobacteria,46AFE@72275|Alteromonadaceae 1236|Gammaproteobacteria S LacY proton/sugar symporter - - - - - - - - - - - - Nuc_H_symport QTD1_k127_5675835_12 1187851.A33M_1256 7.246e-41 153.0 COG1280@1|root,COG1280@2|Bacteria,1MXAI@1224|Proteobacteria,2TSWP@28211|Alphaproteobacteria,3FDBP@34008|Rhodovulum 28211|Alphaproteobacteria E LysE type translocator - - - - - - - - - - - - LysE QTD1_k127_5675835_1 682795.AciX8_0700 0.0 1075.0 COG1506@1|root,COG1506@2|Bacteria,3Y3XQ@57723|Acidobacteria 57723|Acidobacteria E Dienelactone hydrolase family - - - - - - - - - - - - PD40,Peptidase_S9 QTD1_k127_5675835_6 1336245.JAGO01000013_gene1540 1.387e-147 481.0 COG0486@1|root,COG0486@2|Bacteria,1MUCQ@1224|Proteobacteria,1RN5S@1236|Gammaproteobacteria,1XI7M@135619|Oceanospirillales 135619|Oceanospirillales J Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 mnmE - - ko:K03650 - - R08701 RC00053,RC00209,RC00870 ko00000,ko01000,ko03016 - - - MMR_HSR1,MnmE_helical,TrmE_N QTD1_k127_5675835_11 1120999.JONM01000001_gene1169 1.012e-58 211.0 COG2329@1|root,COG2329@2|Bacteria,1RAC6@1224|Proteobacteria,2VU6U@28216|Betaproteobacteria 28216|Betaproteobacteria S Domain of unknown function (DUF3291) - - - - - - - - - - - - DUF3291 QTD1_k127_5675835_7 765910.MARPU_16735 2.849e-140 467.0 COG0706@1|root,COG0706@2|Bacteria,1MV5M@1224|Proteobacteria,1RMH1@1236|Gammaproteobacteria,1WWKE@135613|Chromatiales 135613|Chromatiales U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins yidC - - ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044,ko03029 2.A.9 - - 60KD_IMP,YidC_periplas QTD1_k127_5675835_13 1206777.B195_01020 5.799e-27 116.0 COG0759@1|root,COG0759@2|Bacteria,1N6U4@1224|Proteobacteria,1SCG6@1236|Gammaproteobacteria,1Z84C@136849|Pseudomonas syringae group 1236|Gammaproteobacteria S Could be involved in insertion of integral membrane proteins into the membrane yidD GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0031224,GO:0031226,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - ko:K08998 - - - - ko00000 - - - Haemolytic QTD1_k127_5675835_14 243265.plu4908 1.667e-13 78.0 COG0594@1|root,COG0594@2|Bacteria,1MZQE@1224|Proteobacteria,1S90M@1236|Gammaproteobacteria 1236|Gammaproteobacteria J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme rnpA GO:0000966,GO:0001682,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 ko:K03536 - - - - ko00000,ko01000,ko03016 - - - Ribonuclease_P QTD1_k127_5675835_16 391615.ABSJ01000039_gene1852 1.178e-11 74.0 COG0230@1|root,COG0230@2|Bacteria,1NGGS@1224|Proteobacteria,1SGDJ@1236|Gammaproteobacteria,1J78H@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria J Belongs to the bacterial ribosomal protein bL34 family rpmH GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02914 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L34 QTD1_k127_5675835_4 187272.Mlg_0001 1.559e-194 619.0 COG0593@1|root,COG0593@2|Bacteria,1MU5H@1224|Proteobacteria,1RNHP@1236|Gammaproteobacteria,1WW6C@135613|Chromatiales 135613|Chromatiales L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids dnaA - - ko:K02313 ko02020,ko04112,map02020,map04112 - - - ko00000,ko00001,ko03032,ko03036 - - - Bac_DnaA,Bac_DnaA_C,DnaA_N QTD1_k127_5675835_8 396588.Tgr7_0002 1.074e-127 418.0 COG0592@1|root,COG0592@2|Bacteria,1MVD9@1224|Proteobacteria,1RMNP@1236|Gammaproteobacteria,1WWQF@135613|Chromatiales 135613|Chromatiales L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria - - 2.7.7.7 ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_beta,DNA_pol3_beta_2,DNA_pol3_beta_3 QTD1_k127_5675835_15 204669.Acid345_3273 4.793e-12 77.0 2EK74@1|root,33DXH@2|Bacteria,3Y5VZ@57723|Acidobacteria,2JK2Y@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - QTD1_k127_5675835_9 1384054.N790_12355 7.919e-76 269.0 COG1195@1|root,COG1195@2|Bacteria,1MX8N@1224|Proteobacteria,1RN5P@1236|Gammaproteobacteria,1X3R9@135614|Xanthomonadales 135614|Xanthomonadales L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP recF GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - ko:K03629 ko03440,map03440 - - - ko00000,ko00001,ko03400 - - - AAA_23,SMC_N QTD1_k127_5675835_0 2340.JV46_17100 0.0 1103.0 COG0187@1|root,COG0187@2|Bacteria,1MVKT@1224|Proteobacteria,1RNB2@1236|Gammaproteobacteria,1J4W4@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner gyrB GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009330,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140097,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 ko:K02470 - - - - ko00000,ko01000,ko03032,ko03400 - - - DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim QTD1_k127_5675835_10 765912.Thimo_3687 1.349e-63 228.0 COG0204@1|root,COG0204@2|Bacteria,1MY51@1224|Proteobacteria,1RQYC@1236|Gammaproteobacteria,1WXP3@135613|Chromatiales 135613|Chromatiales I PFAM Phospholipid glycerol acyltransferase - - 2.3.1.51 ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R02241,R09381 RC00004,RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Acyltransferase QTD1_k127_5675835_3 519989.ECTPHS_01404 6.815e-218 698.0 COG0751@1|root,COG0751@2|Bacteria,1MV2F@1224|Proteobacteria,1RNR3@1236|Gammaproteobacteria,1WWSJ@135613|Chromatiales 135613|Chromatiales J Glycyl-tRNA synthetase beta subunit glyS - 6.1.1.14 ko:K01879 ko00970,map00970 M00360 R03654 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - DALR_1,tRNA_synt_2f QTD1_k127_5675835_5 1026882.MAMP_01365 6.848e-153 490.0 COG0752@1|root,COG0752@2|Bacteria,1MVCJ@1224|Proteobacteria,1RMYI@1236|Gammaproteobacteria,4604S@72273|Thiotrichales 72273|Thiotrichales J glycyl-tRNA synthetase, alpha subunit glyQ - 6.1.1.14 ko:K01878 ko00970,map00970 M00360 R03654 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_2e QTD1_k127_5675835_2 1121035.AUCH01000015_gene2570 1.351e-237 742.0 COG0174@1|root,COG0174@2|Bacteria,1MUGQ@1224|Proteobacteria,2VHYE@28216|Betaproteobacteria,2KV8R@206389|Rhodocyclales 206389|Rhodocyclales E glutamine synthetase glnA - 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 - R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 - - - Gln-synt_C,Gln-synt_N QTD1_k127_5677250_3 633131.TR2A62_0072 0.0007967 51.0 COG0790@1|root,COG0790@2|Bacteria 2|Bacteria S beta-lactamase activity - - - ko:K07126 - - - - ko00000 - - - Sel1 QTD1_k127_5677250_0 207954.MED92_06996 1.358e-89 307.0 COG0005@1|root,COG0005@2|Bacteria,1MUWW@1224|Proteobacteria,1RS0S@1236|Gammaproteobacteria,1XH24@135619|Oceanospirillales 135619|Oceanospirillales F Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine deoD - 2.4.2.44 ko:K19696 ko00270,ko01100,map00270,map01100 - R09668 RC00063 ko00000,ko00001,ko01000 - - - PNP_UDP_1 QTD1_k127_5677250_2 1036674.A28LD_1086 4.798e-36 141.0 COG4323@1|root,COG4323@2|Bacteria,1N16T@1224|Proteobacteria,1S8V6@1236|Gammaproteobacteria,2QGAX@267893|Idiomarinaceae 1236|Gammaproteobacteria S membrane - - - - - - - - - - - - DUF962 QTD1_k127_5677250_1 1177179.A11A3_06953 1.449e-72 250.0 COG2918@1|root,COG2918@2|Bacteria,1MW9B@1224|Proteobacteria,1RPNQ@1236|Gammaproteobacteria,1XI43@135619|Oceanospirillales 135619|Oceanospirillales H Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily gshA - 6.3.2.2 ko:K01919 ko00270,ko00480,ko01100,map00270,map00480,map01100 M00118 R00894,R10993 RC00064,RC00090 ko00000,ko00001,ko00002,ko01000 - - - Glu_cys_ligase QTD1_k127_5682567_3 1304878.AUGD01000012_gene4271 5.772e-109 365.0 COG0466@1|root,COG0466@2|Bacteria,1MUV2@1224|Proteobacteria,2U0IK@28211|Alphaproteobacteria,3JTMI@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria O ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner MA20_45155 - 3.4.21.53 ko:K01338 ko04112,map04112 - - - ko00000,ko00001,ko01000,ko01002 - - - AAA,LON_substr_bdg,Lon_C QTD1_k127_5682567_9 172088.AUGA01000004_gene4149 4.335e-20 96.0 COG0071@1|root,COG0071@2|Bacteria,1N0RH@1224|Proteobacteria,2UE1E@28211|Alphaproteobacteria,3JYYY@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria O Hsp20/alpha crystallin family MA20_45160 - - - - - - - - - - - HSP20 QTD1_k127_5682567_8 243233.MCA2737 2.993e-24 107.0 2E600@1|root,330PC@2|Bacteria,1N9V9@1224|Proteobacteria,1SHAU@1236|Gammaproteobacteria,1XFBV@135618|Methylococcales 135618|Methylococcales - - - - - - - - - - - - - - - QTD1_k127_5682567_6 1282360.ABAC460_01310 1.301e-56 202.0 COG2080@1|root,COG2080@2|Bacteria,1RD8C@1224|Proteobacteria,2U6Z6@28211|Alphaproteobacteria,2KGN6@204458|Caulobacterales 204458|Caulobacterales C 2Fe-2S -binding domain protein - - 1.3.99.16 ko:K07302 - - - - ko00000,ko01000 - - - Fer2,Fer2_2 QTD1_k127_5682567_1 1522072.IL54_2058 1.366e-235 754.0 COG1529@1|root,COG1529@2|Bacteria,1QTTJ@1224|Proteobacteria,2TQVK@28211|Alphaproteobacteria,2K25R@204457|Sphingomonadales 204457|Sphingomonadales C aerobic-type carbon monoxide dehydrogenase, large subunit CoxL - - 1.3.99.16 ko:K07303 - - - - ko00000,ko01000 - - - Ald_Xan_dh_C2 QTD1_k127_5682567_2 883126.HMPREF9710_02257 1.271e-153 496.0 COG0477@1|root,COG2814@2|Bacteria,1MVHG@1224|Proteobacteria,2VHCU@28216|Betaproteobacteria,478F6@75682|Oxalobacteraceae 28216|Betaproteobacteria EGP Major Facilitator Superfamily - - - - - - - - - - - - MFS_1 QTD1_k127_5682567_5 298655.KI912266_gene4279 4.939e-79 271.0 COG1832@1|root,COG1832@2|Bacteria,2IHSP@201174|Actinobacteria,4ETBT@85013|Frankiales 201174|Actinobacteria S CoA binding domain - - - ko:K06929 - - - - ko00000 - - - CoA_binding_2 QTD1_k127_5682567_0 263358.VAB18032_08330 3.709e-239 744.0 COG2873@1|root,COG2873@2|Bacteria,2I2EB@201174|Actinobacteria,4DMJF@85008|Micromonosporales 201174|Actinobacteria E Cys/Met metabolism PLP-dependent enzyme cysD - 2.5.1.49 ko:K01740 ko00270,ko01100,map00270,map01100 - R01287,R04859 RC00020,RC02821,RC02848 ko00000,ko00001,ko01000 - - - Cys_Met_Meta_PP QTD1_k127_5682567_4 1122611.KB903985_gene3812 4.814e-80 271.0 COG1765@1|root,COG1765@2|Bacteria,2IG8A@201174|Actinobacteria,4EKV5@85012|Streptosporangiales 201174|Actinobacteria O OsmC-like protein - - - - - - - - - - - - OsmC QTD1_k127_5682567_7 35754.JNYJ01000027_gene6173 1.522e-34 133.0 COG2072@1|root,COG2072@2|Bacteria,2GM3S@201174|Actinobacteria,4D9DG@85008|Micromonosporales 201174|Actinobacteria P Pyridine nucleotide-disulphide oxidoreductase - - - ko:K07222 - - - - ko00000 - - - Pyr_redox_3 QTD1_k127_5684062_3 861299.J421_5972 8.322e-44 171.0 2BS4J@1|root,32M5G@2|Bacteria,1ZUJX@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - QTD1_k127_5684062_0 1267533.KB906737_gene1597 1.477e-165 533.0 COG2848@1|root,COG2848@2|Bacteria 2|Bacteria S UPF0210 protein - - - ko:K09157 - - - - ko00000 - - - DUF711 QTD1_k127_5684062_5 365046.Rta_13530 1.107e-39 160.0 COG2340@1|root,COG2340@2|Bacteria,1MZ84@1224|Proteobacteria,2VV1E@28216|Betaproteobacteria 28216|Betaproteobacteria S Cysteine-rich secretory protein family - - - - - - - - - - - - CAP QTD1_k127_5684062_4 1123073.KB899241_gene2411 3.076e-42 159.0 COG5400@1|root,COG5400@2|Bacteria,1P2T5@1224|Proteobacteria,1T0V8@1236|Gammaproteobacteria,1X7CP@135614|Xanthomonadales 135614|Xanthomonadales S conserved protein UCP033924 - - - - - - - - - - - - - QTD1_k127_5684062_2 530564.Psta_4624 6.719e-51 192.0 COG4341@1|root,COG4341@2|Bacteria,2IZQ5@203682|Planctomycetes 203682|Planctomycetes S Metal dependent phosphohydrolases with conserved 'HD' motif. - - - - - - - - - - - - HD QTD1_k127_5684062_1 1380394.JADL01000012_gene837 1.443e-72 259.0 COG2175@1|root,COG2175@2|Bacteria,1MX7P@1224|Proteobacteria,2TSWR@28211|Alphaproteobacteria,2JSRG@204441|Rhodospirillales 204441|Rhodospirillales Q Taurine catabolism dioxygenase TauD, TfdA family - - - - - - - - - - - - DUF971,TauD QTD1_k127_5684062_6 575540.Isop_2008 6.631e-12 68.0 COG2271@1|root,COG2271@2|Bacteria,2IYU6@203682|Planctomycetes 203682|Planctomycetes G Major Facilitator Superfamily - - - ko:K02445 - - - - ko00000,ko02000 2.A.1.4.3 - - MFS_1 QTD1_k127_5685127_6 105559.Nwat_0331 2.046e-52 188.0 COG0682@1|root,COG0682@2|Bacteria,1MVE3@1224|Proteobacteria,1RMVK@1236|Gammaproteobacteria,1WW3W@135613|Chromatiales 135613|Chromatiales M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins lgt - - ko:K13292 - - - - ko00000,ko01000 - - - LGT QTD1_k127_5685127_4 519989.ECTPHS_02601 1.436e-124 413.0 COG1092@1|root,COG1092@2|Bacteria,1MUGB@1224|Proteobacteria,1RN7Z@1236|Gammaproteobacteria,1WX7X@135613|Chromatiales 135613|Chromatiales J SAM-dependent methyltransferase - - 2.1.1.191 ko:K06969 - - - - ko00000,ko01000,ko03009 - - - Methyltrans_SAM QTD1_k127_5685127_0 1234364.AMSF01000079_gene1847 0.0 1221.0 COG4447@1|root,COG4447@2|Bacteria,1MVIT@1224|Proteobacteria,1RZK1@1236|Gammaproteobacteria 1236|Gammaproteobacteria G K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - - - - - - - - - - Sortilin-Vps10 QTD1_k127_5685127_2 713586.KB900536_gene2613 8.94e-264 829.0 COG1331@1|root,COG1331@2|Bacteria,1MUUT@1224|Proteobacteria,1RSQQ@1236|Gammaproteobacteria,1WWA4@135613|Chromatiales 135613|Chromatiales O Protein of unknown function, DUF255 - - - ko:K06888 - - - - ko00000 - - - Thioredox_DsbH QTD1_k127_5685127_7 1298863.AUEP01000009_gene128 1.338e-13 74.0 COG0640@1|root,COG0640@2|Bacteria,2IQQU@201174|Actinobacteria,4DSCR@85009|Propionibacteriales 201174|Actinobacteria K helix_turn_helix, Arsenical Resistance Operon Repressor - - - - - - - - - - - - HTH_20 QTD1_k127_5685127_5 1122604.JONR01000004_gene814 8.81e-80 267.0 COG3791@1|root,COG3791@2|Bacteria,1RCYS@1224|Proteobacteria,1S3X0@1236|Gammaproteobacteria,1X6FP@135614|Xanthomonadales 135614|Xanthomonadales S Glutathione-dependent formaldehyde-activating enzyme - - - - - - - - - - - - GFA QTD1_k127_5685127_1 414684.RC1_1781 2.175e-308 977.0 COG0506@1|root,COG4230@1|root,COG0506@2|Bacteria,COG4230@2|Bacteria,1MV93@1224|Proteobacteria,2TQPT@28211|Alphaproteobacteria,2JPKY@204441|Rhodospirillales 204441|Rhodospirillales CE Oxidizes proline to glutamate for use as a carbon and nitrogen source putA - 1.2.1.88,1.5.5.2 ko:K13821 ko00250,ko00330,ko01100,ko01110,ko01130,map00250,map00330,map01100,map01110,map01130 - R00245,R00707,R00708,R01253,R04444,R04445,R05051 RC00080,RC00083,RC00216,RC00242,RC00255 ko00000,ko00001,ko01000,ko03000 - - - Aldedh,Pro_dh,Pro_dh-DNA_bdg QTD1_k127_5685127_3 498211.CJA_2895 1.093e-130 430.0 COG1448@1|root,COG1448@2|Bacteria,1MUT0@1224|Proteobacteria,1RN02@1236|Gammaproteobacteria,1FFX3@10|Cellvibrio 1236|Gammaproteobacteria E Aminotransferase class I and II phhC - 2.6.1.1,2.6.1.57 ko:K00813,ko:K00832 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 M00024,M00025,M00034,M00040 R00355,R00694,R00734,R00896,R01731,R02433,R02619,R05052,R07396,R10845 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_1_2 QTD1_k127_5685127_8 536019.Mesop_4355 1.449e-10 66.0 COG3391@1|root,COG3391@2|Bacteria,1P862@1224|Proteobacteria,2TR6Z@28211|Alphaproteobacteria,43HQG@69277|Phyllobacteriaceae 28211|Alphaproteobacteria S 40-residue YVTN family beta-propeller repeat MA20_34510 - - - - - - - - - - - Cytochrom_D1,Lactonase QTD1_k127_5700603_18 224911.27350827 6.219e-05 47.0 2F0SV@1|root,33TUX@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - QTD1_k127_5700603_2 1123073.KB899242_gene1289 4.205e-162 522.0 COG1228@1|root,COG1228@2|Bacteria,1MVAF@1224|Proteobacteria,1RQRP@1236|Gammaproteobacteria,1X3Y7@135614|Xanthomonadales 135614|Xanthomonadales Q Amidohydrolase family - - - - - - - - - - - - Amidohydro_1 QTD1_k127_5700603_6 396588.Tgr7_3205 1.026e-107 364.0 COG0142@1|root,COG0142@2|Bacteria,1MUK6@1224|Proteobacteria,1RPR7@1236|Gammaproteobacteria,1WWNM@135613|Chromatiales 135613|Chromatiales H Belongs to the FPP GGPP synthase family - - 2.5.1.90 ko:K02523 ko00900,ko01110,map00900,map01110 - R09248 RC00279 ko00000,ko00001,ko01000,ko01006 - - - polyprenyl_synt QTD1_k127_5700603_11 713586.KB900536_gene1914 5.563e-36 139.0 COG0261@1|root,COG0261@2|Bacteria,1MZEW@1224|Proteobacteria,1S5VB@1236|Gammaproteobacteria,1WYVV@135613|Chromatiales 135613|Chromatiales J This protein binds to 23S rRNA in the presence of protein L20 rplU - - ko:K02888 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L21p QTD1_k127_5700603_12 153948.NAL212_1043 1.786e-35 136.0 COG0211@1|root,COG0211@2|Bacteria,1MZGH@1224|Proteobacteria,2VU4W@28216|Betaproteobacteria,373IF@32003|Nitrosomonadales 28216|Betaproteobacteria J Belongs to the bacterial ribosomal protein bL27 family rpmA - - ko:K02899 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L27 QTD1_k127_5700603_3 713586.KB900536_gene1912 8.729e-138 446.0 COG0536@1|root,COG0536@2|Bacteria,1MUGZ@1224|Proteobacteria,1RMFQ@1236|Gammaproteobacteria,1WX4T@135613|Chromatiales 135613|Chromatiales S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control obg - - ko:K03979 - - - - ko00000,ko01000,ko03009 - - - GTP1_OBG,MMR_HSR1 QTD1_k127_5700603_14 396588.Tgr7_3210 1.317e-22 99.0 COG0268@1|root,COG0268@2|Bacteria,1MZ94@1224|Proteobacteria,1S9AI@1236|Gammaproteobacteria,1WYU8@135613|Chromatiales 135613|Chromatiales J Binds directly to 16S ribosomal RNA rpsT - - ko:K02968 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S20p QTD1_k127_5700603_7 472759.Nhal_2800 3.713e-80 277.0 COG0196@1|root,COG0196@2|Bacteria,1MV9I@1224|Proteobacteria,1RN44@1236|Gammaproteobacteria,1WWQ1@135613|Chromatiales 135613|Chromatiales H Belongs to the ribF family - - 2.7.1.26,2.7.7.2 ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R00161,R00549 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - FAD_syn,Flavokinase QTD1_k127_5700603_0 472759.Nhal_0903 0.0 1261.0 COG0060@1|root,COG0060@2|Bacteria,1MVBQ@1224|Proteobacteria,1RMTF@1236|Gammaproteobacteria,1WXI8@135613|Chromatiales 135613|Chromatiales J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) ileS - 6.1.1.5 ko:K01870 ko00970,map00970 M00359,M00360 R03656 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,tRNA-synt_1,zf-FPG_IleRS QTD1_k127_5700603_10 1177181.T9A_02986 1.023e-41 169.0 COG0597@1|root,COG0597@2|Bacteria,1RGV9@1224|Proteobacteria,1S60E@1236|Gammaproteobacteria,1XK4C@135619|Oceanospirillales 135619|Oceanospirillales MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins lspA - 3.4.23.36 ko:K03101 ko03060,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_A8 QTD1_k127_5700603_4 1123261.AXDW01000004_gene2820 5.231e-136 449.0 COG0761@1|root,COG0761@2|Bacteria,1MU7G@1224|Proteobacteria,1RMN8@1236|Gammaproteobacteria,1X4RS@135614|Xanthomonadales 135614|Xanthomonadales IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis ispH - 1.17.7.4 ko:K03527 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05884,R08210 RC01137,RC01487 ko00000,ko00001,ko00002,ko01000 - - - LYTB QTD1_k127_5700603_15 700598.Niako_0775 2.708e-12 79.0 COG3325@1|root,COG3469@1|root,COG3979@1|root,COG3325@2|Bacteria,COG3469@2|Bacteria,COG3979@2|Bacteria,4PKBR@976|Bacteroidetes 976|Bacteroidetes G Glycoside Hydrolase - GO:0003674,GO:0003824,GO:0004553,GO:0004568,GO:0005575,GO:0005576,GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006040,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016798,GO:0017144,GO:0042737,GO:0043170,GO:0044237,GO:0044248,GO:0046348,GO:0071704,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.2.1.14 ko:K01183 ko00520,ko01100,map00520,map01100 - R01206,R02334 RC00467 ko00000,ko00001,ko01000 - GH18 - CBM_5_12,CarboxypepD_reg,Glyco_hydro_18 QTD1_k127_5700603_16 1004785.AMBLS11_10360 1.536e-07 64.0 COG1404@1|root,COG2931@1|root,COG1404@2|Bacteria,COG2931@2|Bacteria,1QYT6@1224|Proteobacteria,1T3TK@1236|Gammaproteobacteria,46488@72275|Alteromonadaceae 1236|Gammaproteobacteria O Domain of unknown function (DUF4397) - - - - - - - - - - - - CHRD,DUF4397 QTD1_k127_5700603_9 153721.MYP_55 1.741e-62 226.0 COG1560@1|root,COG1560@2|Bacteria,4NGQU@976|Bacteroidetes,47MHM@768503|Cytophagia 976|Bacteroidetes M Lipid A biosynthesis acyltransferase waaM - 2.3.1.241 ko:K02517 ko00540,ko01100,map00540,map01100 M00060 R05146 RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Lip_A_acyltrans QTD1_k127_5700603_1 392499.Swit_4744 0.0 1063.0 COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,2K0BI@204457|Sphingomonadales 204457|Sphingomonadales V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ACR_tran QTD1_k127_5700603_8 1346791.M529_16435 1.944e-78 277.0 COG0845@1|root,COG0845@2|Bacteria,1MXGH@1224|Proteobacteria,2U18A@28211|Alphaproteobacteria,2K0EM@204457|Sphingomonadales 204457|Sphingomonadales M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - HlyD_D23 QTD1_k127_5700603_13 396588.Tgr7_3233 2.06e-33 134.0 COG0735@1|root,COG0735@2|Bacteria,1RH58@1224|Proteobacteria,1SAXA@1236|Gammaproteobacteria 1236|Gammaproteobacteria P belongs to the Fur family - - - ko:K09826 - - - - ko00000,ko03000 - - - FUR QTD1_k127_5700603_5 1304275.C41B8_14930 6.128e-124 409.0 COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,1T1II@1236|Gammaproteobacteria 1236|Gammaproteobacteria IQ COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - ko:K13614 - - - - ko00000,ko01004,ko01008 - - - AMP-binding,AMP-binding_C,Acyl_transf_1,Condensation,KAsynt_C_assoc,KR,Ketoacyl-synt_C,NAD_binding_4,PP-binding,PS-DH,Thioesterase,ketoacyl-synt QTD1_k127_5720168_4 1395516.PMO01_00250 4.089e-103 359.0 COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,1RM8A@1236|Gammaproteobacteria 1236|Gammaproteobacteria T Diguanylate cyclase - - - - - - - - - - - - EAL,GGDEF,PAS_3,PAS_9 QTD1_k127_5720168_0 1163617.SCD_n02426 4.946e-311 962.0 COG0296@1|root,COG0296@2|Bacteria,1QTVN@1224|Proteobacteria,2VGZZ@28216|Betaproteobacteria 28216|Betaproteobacteria G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position glgB - 2.4.1.18 ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 M00565 R02110 - ko00000,ko00001,ko00002,ko01000,ko04147 - CBM48,GH13 - Alpha-amylase,Alpha-amylase_C,CBM_48 QTD1_k127_5720168_8 743721.Psesu_1188 4.989e-05 52.0 2EIBG@1|root,33C2W@2|Bacteria,1NM4U@1224|Proteobacteria,1SIM3@1236|Gammaproteobacteria,1X8F1@135614|Xanthomonadales 135614|Xanthomonadales - - - - - - - - - - - - - - - QTD1_k127_5720168_1 666685.R2APBS1_1385 4.467e-293 910.0 COG1132@1|root,COG1132@2|Bacteria,1MXC2@1224|Proteobacteria,1RZQR@1236|Gammaproteobacteria,1XCEP@135614|Xanthomonadales 135614|Xanthomonadales V ABC-type multidrug transport system ATPase and permease - - - ko:K06147 - - - - ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 - - ABC_tran QTD1_k127_5720168_5 1336235.JAEG01000006_gene925 4.476e-48 185.0 COG1309@1|root,COG1309@2|Bacteria,1MX72@1224|Proteobacteria,2U5RY@28211|Alphaproteobacteria,4B93H@82115|Rhizobiaceae 28211|Alphaproteobacteria K Repressor involved in choline regulation of the bet genes betI - - ko:K02167 - - - - ko00000,ko03000 - - - TetR_C_6,TetR_N QTD1_k127_5720168_2 1198452.Jab_1c12150 2.912e-258 805.0 COG1233@1|root,COG1233@2|Bacteria,1MV2R@1224|Proteobacteria,2VRSD@28216|Betaproteobacteria,475NM@75682|Oxalobacteraceae 28216|Betaproteobacteria Q Thi4 family - - - - - - - - - - - - Amino_oxidase,DAO,NAD_binding_8 QTD1_k127_5720168_3 1122604.JONR01000029_gene3378 7.168e-192 614.0 COG4638@1|root,COG4638@2|Bacteria,1MWXW@1224|Proteobacteria,1S9NJ@1236|Gammaproteobacteria,1X5C8@135614|Xanthomonadales 135614|Xanthomonadales P COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - - 1.14.12.1,1.14.15.7 ko:K00499,ko:K16319 ko00260,ko00627,ko01120,map00260,map00627,map01120 M00637 R00823,R00825,R07409 RC00087,RC00192 br01602,ko00000,ko00001,ko00002,ko01000 - - - Rieske,Ring_hydroxyl_A QTD1_k127_5720168_7 1379270.AUXF01000004_gene2945 1.486e-26 114.0 2E3B5@1|root,32YAP@2|Bacteria,1ZUWQ@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Protein of unknown function (DUF2721) - - - - - - - - - - - - DUF2721 QTD1_k127_5720168_6 1123354.AUDR01000014_gene855 1.572e-39 149.0 COG1217@1|root,COG1217@2|Bacteria,1MV5Q@1224|Proteobacteria,2VH2W@28216|Betaproteobacteria,1KREI@119069|Hydrogenophilales 119069|Hydrogenophilales T Elongation factor G C-terminus - - - ko:K06207 - - - - ko00000 - - - EFG_C,GTP_EFTU,GTP_EFTU_D2 QTD1_k127_5788053_3 1121127.JAFA01000003_gene1876 3.545e-32 128.0 COG0436@1|root,COG0436@2|Bacteria,1MW0Z@1224|Proteobacteria,2WEKR@28216|Betaproteobacteria,1KHRR@119060|Burkholderiaceae 28216|Betaproteobacteria E aminotransferase class I and II - - 2.6.1.84 ko:K12252 ko00330,ko01100,map00330,map01100 - R08197 RC00006,RC00008 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 QTD1_k127_5788053_0 1245471.PCA10_40350 1.784e-122 411.0 COG0028@1|root,COG0028@2|Bacteria,1MWVW@1224|Proteobacteria,1SJY3@1236|Gammaproteobacteria,1YEIX@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria EH Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - 4.1.1.75 ko:K12253 ko00330,ko01100,map00330,map01100 - R03178 RC00506 ko00000,ko00001,ko01000 - - - TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N QTD1_k127_5788053_2 1123256.KB907928_gene1934 3.632e-54 209.0 COG0697@1|root,COG0697@2|Bacteria,1MXX1@1224|Proteobacteria,1RPRZ@1236|Gammaproteobacteria,1X4Y9@135614|Xanthomonadales 135614|Xanthomonadales EG Permeases of the drug metabolite transporter (DMT) superfamily yedA - - - - - - - - - - - EamA QTD1_k127_5788053_1 983920.Y88_2386 1.967e-76 258.0 COG1233@1|root,COG1233@2|Bacteria,1MV2R@1224|Proteobacteria,2TSR0@28211|Alphaproteobacteria,2JZXX@204457|Sphingomonadales 204457|Sphingomonadales Q Oxidoreductase - - - - - - - - - - - - Amino_oxidase,NAD_binding_8 QTD1_k127_5795452_5 1472716.KBK24_0112335 8.351e-124 404.0 COG1023@1|root,COG1023@2|Bacteria,1QU14@1224|Proteobacteria,2WH34@28216|Betaproteobacteria,1K04P@119060|Burkholderiaceae 28216|Betaproteobacteria G 6-phosphogluconate dehydrogenase - - 1.1.1.343,1.1.1.44 ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 M00004,M00006 R01528,R10221 RC00001,RC00539 ko00000,ko00001,ko00002,ko01000 - - - 6PGD,NAD_binding_2 QTD1_k127_5795452_3 1267535.KB906767_gene3855 7.215e-161 531.0 COG0364@1|root,COG0364@2|Bacteria,3Y627@57723|Acidobacteria,2JKTN@204432|Acidobacteriia 204432|Acidobacteriia G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone - - 1.1.1.363,1.1.1.49 ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 M00004,M00006,M00008 R00835,R02736,R10907 RC00001,RC00066 ko00000,ko00001,ko00002,ko01000,ko04147 - - - G6PD_C,G6PD_N QTD1_k127_5795452_17 1278309.KB907109_gene3244 3.498e-32 140.0 COG0526@1|root,COG0526@2|Bacteria,1MZ36@1224|Proteobacteria,1S8UU@1236|Gammaproteobacteria,1XKMI@135619|Oceanospirillales 135619|Oceanospirillales CO Thiol-disulfide isomerase and thioredoxins - - - - - - - - - - - - AhpC-TSA,Redoxin QTD1_k127_5795452_1 1163409.UUA_08301 3.152e-200 641.0 COG0457@1|root,COG0457@2|Bacteria,1MVMG@1224|Proteobacteria,1RU5N@1236|Gammaproteobacteria,1X3GK@135614|Xanthomonadales 135614|Xanthomonadales S COG0457 FOG TPR repeat - - - - - - - - - - - - Sulfotransfer_3,TPR_16,TPR_19,TPR_8 QTD1_k127_5795452_7 1122604.JONR01000006_gene2657 4.339e-95 331.0 COG3555@1|root,COG3555@2|Bacteria,1MXZE@1224|Proteobacteria,1S1N0@1236|Gammaproteobacteria,1X5WC@135614|Xanthomonadales 135614|Xanthomonadales O beta-hydroxylase - - - - - - - - - - - - Asp_Arg_Hydrox,TPR_16,TPR_19 QTD1_k127_5795452_23 414684.RC1_3735 7.381e-06 59.0 2C79Y@1|root,33267@2|Bacteria,1N7XV@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - QTD1_k127_5795452_0 1161401.ASJA01000030_gene3006 1.723e-237 769.0 COG1629@1|root,COG4206@1|root,COG4206@2|Bacteria,COG4771@2|Bacteria,1MU9K@1224|Proteobacteria,2TTJG@28211|Alphaproteobacteria,43WD4@69657|Hyphomonadaceae 28211|Alphaproteobacteria P COG1629 Outer membrane receptor proteins, mostly Fe transport - - - - - - - - - - - - Plug,TonB_dep_Rec QTD1_k127_5795452_15 1123253.AUBD01000002_gene1344 5.592e-47 177.0 COG3751@1|root,COG3751@2|Bacteria,1NAUK@1224|Proteobacteria,1S2G4@1236|Gammaproteobacteria 1236|Gammaproteobacteria O Putative 2OG-Fe(II) oxygenase - - - - - - - - - - - - 2OG-FeII_Oxy_5 QTD1_k127_5795452_22 1123253.AUBD01000002_gene1344 1.266e-12 77.0 COG3751@1|root,COG3751@2|Bacteria,1NAUK@1224|Proteobacteria,1S2G4@1236|Gammaproteobacteria 1236|Gammaproteobacteria O Putative 2OG-Fe(II) oxygenase - - - - - - - - - - - - 2OG-FeII_Oxy_5 QTD1_k127_5795452_6 1384056.N787_04790 1.955e-119 410.0 COG0457@1|root,COG0457@2|Bacteria,1MVMG@1224|Proteobacteria,1RY2G@1236|Gammaproteobacteria,1XCBJ@135614|Xanthomonadales 135614|Xanthomonadales S Sulfotransferase domain - - - - - - - - - - - - Sulfotransfer_3,TPR_8 QTD1_k127_5795452_20 472759.Nhal_3051 2.917e-18 98.0 COG0363@1|root,COG0363@2|Bacteria,1R5K6@1224|Proteobacteria,1SYT9@1236|Gammaproteobacteria,1X25R@135613|Chromatiales 135613|Chromatiales G PFAM glucosamine galactosamine-6-phosphate isomerase - - 3.1.1.31 ko:K01057 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 M00004,M00006,M00008 R02035 RC00537 ko00000,ko00001,ko00002,ko01000 - - - Glucosamine_iso QTD1_k127_5795452_8 1121943.KB899992_gene2278 2.888e-90 310.0 COG0265@1|root,COG0265@2|Bacteria,1MU63@1224|Proteobacteria,1RN9T@1236|Gammaproteobacteria,1XICI@135619|Oceanospirillales 135619|Oceanospirillales O Belongs to the peptidase S1C family - - 3.4.21.107 ko:K04691,ko:K04771,ko:K04772 ko01503,ko02020,map01503,map02020 M00728 - - ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 - - - PDZ,PDZ_2,Trypsin_2 QTD1_k127_5795452_13 1268635.Loa_02684 2.735e-61 235.0 COG0723@1|root,COG0723@2|Bacteria,1RAA2@1224|Proteobacteria,1RP9H@1236|Gammaproteobacteria,1JC5R@118969|Legionellales 118969|Legionellales C Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis petA - 1.10.2.2 ko:K00411 ko00190,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016 M00151,M00152 - - ko00000,ko00001,ko00002,ko01000 - - - Rieske,UCR_Fe-S_N QTD1_k127_5795452_2 754477.Q7C_2215 1.277e-176 562.0 COG1290@1|root,COG1290@2|Bacteria,1MV97@1224|Proteobacteria,1RNCP@1236|Gammaproteobacteria,45ZV4@72273|Thiotrichales 72273|Thiotrichales C Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - ko:K00412 ko00190,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016 M00151,M00152 - - ko00000,ko00001,ko00002,ko03029 - - - Cytochrom_B_C,Cytochrome_B QTD1_k127_5795452_12 1049564.TevJSym_ag00070 3.489e-62 223.0 COG2857@1|root,COG2857@2|Bacteria,1QFU2@1224|Proteobacteria,1RN4Y@1236|Gammaproteobacteria,1J7JW@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria P Cytochrome C1 family petC - - ko:K00413 ko00190,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016 M00151,M00152 - - ko00000,ko00001,ko00002 - - - Cytochrom_C1 QTD1_k127_5795452_10 870187.Thini_1049 9.62e-75 258.0 COG0625@1|root,COG0625@2|Bacteria,1MXJD@1224|Proteobacteria,1RP12@1236|Gammaproteobacteria,460HZ@72273|Thiotrichales 72273|Thiotrichales O Stringent starvation protein A - - - ko:K03599 - - - - ko00000,ko02000,ko03021 1.A.12.3.1 - - GST_C,GST_N_3 QTD1_k127_5795452_16 1380387.JADM01000003_gene2464 1.308e-34 136.0 COG2969@1|root,COG2969@2|Bacteria,1MZ2Q@1224|Proteobacteria,1S8WT@1236|Gammaproteobacteria,1XKFH@135619|Oceanospirillales 135619|Oceanospirillales S Stringent starvation protein B sspB - - ko:K03600 - - - - ko00000,ko03021 - - - SspB QTD1_k127_5795452_19 440512.C211_08439 3.141e-19 91.0 2E9J1@1|root,333RY@2|Bacteria,1NIX0@1224|Proteobacteria,1SGM0@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_5795452_4 460265.Mnod_7235 6.002e-140 457.0 COG2070@1|root,COG2070@2|Bacteria,1MU2F@1224|Proteobacteria,2TUT7@28211|Alphaproteobacteria,1JSXA@119045|Methylobacteriaceae 28211|Alphaproteobacteria S PFAM 2-nitropropane dioxygenase NPD - - 1.13.12.16,1.3.1.9 ko:K00459,ko:K02371 ko00061,ko00910,ko01100,ko01212,map00061,map00910,map01100,map01212 M00083 R00025,R04429,R04724,R04955,R04958,R04961,R04966,R04969,R07765 RC00052,RC00076,RC02541,RC02759 ko00000,ko00001,ko00002,ko01000,ko01004 - - - NMO QTD1_k127_5795452_9 935863.AWZR01000009_gene45 4.675e-79 273.0 COG0313@1|root,COG0313@2|Bacteria,1MU0E@1224|Proteobacteria,1RM7U@1236|Gammaproteobacteria,1X4QV@135614|Xanthomonadales 135614|Xanthomonadales H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA rsmI - 2.1.1.198 ko:K07056 - - - - ko00000,ko01000,ko03009 - - - TP_methylase QTD1_k127_5795452_11 1123256.KB907930_gene3563 1.366e-65 243.0 COG3107@1|root,COG3107@2|Bacteria,1MUHR@1224|Proteobacteria,1RXX4@1236|Gammaproteobacteria,1X4TB@135614|Xanthomonadales 135614|Xanthomonadales M (Lipo)protein - - - ko:K07121 - - - - ko00000 - - - LppC QTD1_k127_5795452_18 757424.Hsero_4670 4.73e-20 94.0 COG0792@1|root,COG0792@2|Bacteria,1N6VN@1224|Proteobacteria,2VU20@28216|Betaproteobacteria,474NW@75682|Oxalobacteraceae 28216|Betaproteobacteria L Belongs to the UPF0102 family - - - ko:K07460 - - - - ko00000 - - - UPF0102 QTD1_k127_5795452_14 1335757.SPICUR_07680 5.171e-59 209.0 COG2001@1|root,COG2001@2|Bacteria,1RHCG@1224|Proteobacteria,1S63F@1236|Gammaproteobacteria,1WYVR@135613|Chromatiales 135613|Chromatiales K Belongs to the MraZ family mraZ - - ko:K03925 - - - - ko00000 - - - MraZ QTD1_k127_5795452_21 1123354.AUDR01000017_gene34 7.366e-16 79.0 COG0275@1|root,COG0275@2|Bacteria,1MUT4@1224|Proteobacteria,2VIYT@28216|Betaproteobacteria,1KS80@119069|Hydrogenophilales 119069|Hydrogenophilales M MraW methylase family - - 2.1.1.199 ko:K03438 - - - - ko00000,ko01000,ko03009 - - - Methyltransf_5 QTD1_k127_5802176_5 1122604.JONR01000011_gene3730 3.031e-08 56.0 COG3203@1|root,COG3203@2|Bacteria,1PTQE@1224|Proteobacteria 1224|Proteobacteria M Gram-negative porin - - - - - - - - - - - - Porin_4 QTD1_k127_5802176_6 382245.ASA_2135 1.474e-06 57.0 COG2823@1|root,COG2823@2|Bacteria,1PCIJ@1224|Proteobacteria,1RRGP@1236|Gammaproteobacteria,1Y69P@135624|Aeromonadales 135624|Aeromonadales S BON domain - - - ko:K04065 - - - - ko00000 - - - BON QTD1_k127_5802176_7 105559.Nwat_0379 1.476e-05 52.0 COG2823@1|root,COG2823@2|Bacteria,1N0SU@1224|Proteobacteria,1S926@1236|Gammaproteobacteria,1WZ45@135613|Chromatiales 135613|Chromatiales S periplasmic or secreted lipoprotein - - - ko:K04065 - - - - ko00000 - - - BON QTD1_k127_5802176_1 886293.Sinac_5763 3.661e-198 648.0 COG2936@1|root,COG2936@2|Bacteria,2J2G5@203682|Planctomycetes 203682|Planctomycetes S X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - ko:K06978 - - - - ko00000 - - - PepX_C,Peptidase_S15 QTD1_k127_5802176_3 395495.Lcho_2075 5.859e-113 381.0 COG1024@1|root,COG1024@2|Bacteria,1MUJ7@1224|Proteobacteria,2VIP5@28216|Betaproteobacteria,1KJZ0@119065|unclassified Burkholderiales 28216|Betaproteobacteria I enoyl-CoA hydratase fadB3 - - - - - - - - - - - ECH_1 QTD1_k127_5802176_4 204669.Acid345_0678 4.362e-92 318.0 COG0531@1|root,COG0531@2|Bacteria 2|Bacteria E amino acid yagE - - - - - - - - - - - AA_permease_2 QTD1_k127_5802176_2 1122137.AQXF01000001_gene2762 1.741e-158 512.0 COG0498@1|root,COG0498@2|Bacteria,1R7X1@1224|Proteobacteria,2TUR3@28211|Alphaproteobacteria 28211|Alphaproteobacteria E Threonine synthase MA20_41710 - 4.2.3.1 ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 M00018 R01466,R05086 RC00017,RC00526 ko00000,ko00001,ko00002,ko01000 - - - PALP QTD1_k127_5802176_0 1090319.KE386571_gene1544 3.943e-241 756.0 COG3653@1|root,COG3653@2|Bacteria,1MWWY@1224|Proteobacteria,2TSZZ@28211|Alphaproteobacteria,2K1RR@204457|Sphingomonadales 204457|Sphingomonadales Q Amidohydrolase family - - 3.5.1.81 ko:K06015 - - R02192 RC00064,RC00328 ko00000,ko01000 - - - Amidohydro_3 QTD1_k127_585359_8 1122604.JONR01000040_gene4058 3.145e-68 235.0 COG3115@1|root,COG3115@2|Bacteria,1QR19@1224|Proteobacteria,1S736@1236|Gammaproteobacteria,1X6RG@135614|Xanthomonadales 135614|Xanthomonadales D YXWGXW repeat (2 copies) - - - - - - - - - - - - YXWGXW QTD1_k127_585359_9 1123256.KB907937_gene1869 7.396e-58 227.0 28H7B@1|root,2Z7JJ@2|Bacteria,1MX57@1224|Proteobacteria,1S5T8@1236|Gammaproteobacteria,1X6U2@135614|Xanthomonadales 135614|Xanthomonadales S Putative 2OG-Fe(II) oxygenase - - - - - - - - - - - - 2OG-FeII_Oxy_5 QTD1_k127_585359_0 1265502.KB905951_gene830 1.565e-243 773.0 COG1012@1|root,COG1012@2|Bacteria,1MUHV@1224|Proteobacteria,2VI0N@28216|Betaproteobacteria,4A9T8@80864|Comamonadaceae 28216|Betaproteobacteria C TIGRFAM methylmalonate-semialdehyde dehydrogenase mmsA_2 - 1.2.1.18,1.2.1.27 ko:K00140 ko00280,ko00410,ko00562,ko00640,ko01100,ko01200,map00280,map00410,map00562,map00640,map01100,map01200 M00013 R00705,R00706,R00922,R00935 RC00004,RC02723,RC02817 ko00000,ko00001,ko00002,ko01000 - - - Aldedh QTD1_k127_585359_3 1121013.P873_10470 5.841e-211 663.0 COG2224@1|root,COG2224@2|Bacteria,1MWIF@1224|Proteobacteria,1RQAK@1236|Gammaproteobacteria,1X3U8@135614|Xanthomonadales 135614|Xanthomonadales C Catalyzes the reversible formation of glyoxylate and succinate from isocitrate aceA - 4.1.3.1 ko:K01637 ko00630,ko01100,ko01110,ko01120,ko01200,map00630,map01100,map01110,map01120,map01200 M00012 R00479 RC00311,RC00313 ko00000,ko00001,ko00002,ko01000 - - - ICL QTD1_k127_585359_2 562970.Btus_1004 1.116e-216 685.0 COG2225@1|root,COG2225@2|Bacteria,1TPE8@1239|Firmicutes,4H9ST@91061|Bacilli,27820@186823|Alicyclobacillaceae 91061|Bacilli C Belongs to the malate synthase family aceB - 2.3.3.9 ko:K01638 ko00620,ko00630,ko01100,ko01110,ko01120,ko01200,map00620,map00630,map01100,map01110,map01120,map01200 M00012 R00472 RC00004,RC00308,RC02747 ko00000,ko00001,ko00002,ko01000 - - - Malate_synthase QTD1_k127_585359_4 319224.Sputcn32_3866 7.364e-161 521.0 COG1396@1|root,COG1396@2|Bacteria,1R3Z8@1224|Proteobacteria,1RRMV@1236|Gammaproteobacteria,2QAI5@267890|Shewanellaceae 1236|Gammaproteobacteria K Transcriptional regulator, XRE family - - - - - - - - - - - - DUF3612,HTH_19,HTH_3,Peptidase_M78 QTD1_k127_585359_7 215803.DB30_1684 3.108e-73 258.0 COG3358@1|root,COG3358@2|Bacteria,1RBIA@1224|Proteobacteria,4384Y@68525|delta/epsilon subdivisions,2X9XK@28221|Deltaproteobacteria,2YVS9@29|Myxococcales 28221|Deltaproteobacteria S Protein of unknown function (DUF1684) - - - ko:K09164 - - - - ko00000 - - - DUF1684 QTD1_k127_585359_6 1218084.BBJK01000195_gene8088 1.074e-90 319.0 COG4409@1|root,COG4409@2|Bacteria,1Q513@1224|Proteobacteria,2WB3C@28216|Betaproteobacteria,1K536@119060|Burkholderiaceae 28216|Betaproteobacteria G BNR repeat-like domain - - - - - - - - - - - - BNR,BNR_2 QTD1_k127_585359_1 292.DM42_5621 7.429e-239 765.0 COG4772@1|root,COG4772@2|Bacteria,1MXJU@1224|Proteobacteria,2VN9X@28216|Betaproteobacteria,1K2NQ@119060|Burkholderiaceae 28216|Betaproteobacteria P TonB-dependent receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - Plug,TonB_dep_Rec QTD1_k127_585359_5 1123256.KB907928_gene1973 7.938e-98 329.0 COG0508@1|root,COG0508@2|Bacteria,1MU7K@1224|Proteobacteria,1RMJR@1236|Gammaproteobacteria,1X3BI@135614|Xanthomonadales 135614|Xanthomonadales C e3 binding domain - - - - - - - - - - - - 2-oxoacid_dh,Biotin_lipoyl,E3_binding QTD1_k127_608957_6 314278.NB231_10393 1.86e-106 349.0 COG2766@1|root,COG2766@2|Bacteria,1MVW7@1224|Proteobacteria,1RNFJ@1236|Gammaproteobacteria,1WWXB@135613|Chromatiales 135613|Chromatiales T PFAM PrkA AAA - - - ko:K07180 - - - - ko00000 - - - AAA_PrkA,PrkA QTD1_k127_608957_5 314278.NB231_10398 6.218e-120 398.0 COG2718@1|root,COG2718@2|Bacteria,1MWQM@1224|Proteobacteria,1RQWC@1236|Gammaproteobacteria,1WWH8@135613|Chromatiales 135613|Chromatiales S Belongs to the UPF0229 family - - - ko:K09786 - - - - ko00000 - - - DUF444 QTD1_k127_608957_1 1095769.CAHF01000011_gene2110 2.906e-174 561.0 COG2719@1|root,COG2719@2|Bacteria,1MW6U@1224|Proteobacteria,2VHJ7@28216|Betaproteobacteria,475RY@75682|Oxalobacteraceae 28216|Betaproteobacteria S SpoVR like protein spoVR1 - - ko:K06415 - - - - ko00000 - - - SpoVR QTD1_k127_608957_0 765911.Thivi_2227 1.951e-281 880.0 COG0480@1|root,COG0480@2|Bacteria,1MVVY@1224|Proteobacteria,1RYCE@1236|Gammaproteobacteria,1WWXP@135613|Chromatiales 135613|Chromatiales J small GTP-binding protein - - - ko:K02355 - - - - ko00000,ko03012,ko03029 - - - EFG_C,EFG_II,EFG_IV,GTP_EFTU QTD1_k127_608957_12 903818.KI912268_gene1051 2.503e-18 96.0 COG1216@1|root,COG1216@2|Bacteria 2|Bacteria V Glycosyl transferase, family 2 - - - - - - - - - - - - DUF707 QTD1_k127_608957_10 459495.SPLC1_S131660 9.927e-49 195.0 COG0457@1|root,COG0457@2|Bacteria,1GIAH@1117|Cyanobacteria,1HFNG@1150|Oscillatoriales 1117|Cyanobacteria S Tetratricopeptide repeat - - - - - - - - - - - - TPR_1,TPR_8 QTD1_k127_608957_4 1248916.ANFY01000005_gene2779 6.675e-133 444.0 COG1088@1|root,COG1088@2|Bacteria,1MU5E@1224|Proteobacteria,2TT5T@28211|Alphaproteobacteria,2K275@204457|Sphingomonadales 204457|Sphingomonadales M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily rmlB - 4.2.1.46 ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 M00793 R06513 RC00402 ko00000,ko00001,ko00002,ko01000 - - - GDP_Man_Dehyd QTD1_k127_608957_7 685778.AORL01000015_gene2393 8.489e-76 270.0 COG1091@1|root,COG1091@2|Bacteria,1MUXM@1224|Proteobacteria,2TSP6@28211|Alphaproteobacteria,2K002@204457|Sphingomonadales 204457|Sphingomonadales M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose - - 1.1.1.133 ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R02777 RC00182 ko00000,ko00001,ko00002,ko01000 - - - RmlD_sub_bind QTD1_k127_608957_8 637389.Acaty_c0417 4.639e-65 232.0 COG1898@1|root,COG1898@2|Bacteria,1R9YD@1224|Proteobacteria,1S245@1236|Gammaproteobacteria,2NCIQ@225057|Acidithiobacillales 225057|Acidithiobacillales G Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose - - 5.1.3.13 ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R06514 RC01531 ko00000,ko00001,ko00002,ko01000 - - - dTDP_sugar_isom QTD1_k127_608957_3 1163409.UUA_11738 4.408e-133 437.0 COG1209@1|root,COG1209@2|Bacteria,1MU0X@1224|Proteobacteria,1RMTR@1236|Gammaproteobacteria,1X399@135614|Xanthomonadales 135614|Xanthomonadales M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis rmlA - 2.7.7.24 ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 M00793 R02328 RC00002 ko00000,ko00001,ko00002,ko01000 - - - NTP_transferase QTD1_k127_608957_2 1349767.GJA_4324 3.31e-153 521.0 COG1629@1|root,COG4771@2|Bacteria,1MU9K@1224|Proteobacteria,2VJSU@28216|Betaproteobacteria,472GB@75682|Oxalobacteraceae 28216|Betaproteobacteria P TonB dependent receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - Plug,TonB_dep_Rec QTD1_k127_608957_9 1122604.JONR01000006_gene2660 3.274e-64 242.0 COG0457@1|root,COG0457@2|Bacteria,1MVMG@1224|Proteobacteria,1RNVA@1236|Gammaproteobacteria,1X6C3@135614|Xanthomonadales 135614|Xanthomonadales S Putative 2OG-Fe(II) oxygenase - - - - - - - - - - - - 2OG-FeII_Oxy_5,TPR_16,TPR_19 QTD1_k127_608957_11 1123267.JONN01000001_gene1594 9.143e-30 123.0 COG1430@1|root,COG1430@2|Bacteria,1MZBJ@1224|Proteobacteria,2UBSI@28211|Alphaproteobacteria,2K5JY@204457|Sphingomonadales 204457|Sphingomonadales S Uncharacterized ACR, COG1430 - - - ko:K09005 - - - - ko00000 - - - DUF192 QTD1_k127_637753_3 472759.Nhal_0739 1.742e-92 311.0 COG0689@1|root,COG0689@2|Bacteria,1MVFZ@1224|Proteobacteria,1RNTB@1236|Gammaproteobacteria,1WW0F@135613|Chromatiales 135613|Chromatiales J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates rph - 2.7.7.56 ko:K00989 - - - - ko00000,ko01000,ko03016 - - - RNase_PH,RNase_PH_C QTD1_k127_637753_5 640081.Dsui_0495 1.036e-58 212.0 COG0631@1|root,COG0631@2|Bacteria,1MVE7@1224|Proteobacteria,2VIAV@28216|Betaproteobacteria,2KUHY@206389|Rhodocyclales 206389|Rhodocyclales T COG0631 Serine threonine protein phosphatase - - 3.1.3.16 ko:K20074 - - - - ko00000,ko01000,ko01009 - - - PP2C_2 QTD1_k127_637753_4 1123257.AUFV01000009_gene2213 5.986e-80 277.0 COG1561@1|root,COG1561@2|Bacteria,1MWRA@1224|Proteobacteria,1RMAB@1236|Gammaproteobacteria,1X4G5@135614|Xanthomonadales 135614|Xanthomonadales S stress-induced protein - - - - - - - - - - - - DUF1732,YicC_N QTD1_k127_637753_0 1458427.BAWN01000034_gene1931 1.631e-180 574.0 COG3550@1|root,COG3550@2|Bacteria,1N458@1224|Proteobacteria,2VP76@28216|Betaproteobacteria,4ACAK@80864|Comamonadaceae 28216|Betaproteobacteria S Pfam:HipA_N - - 2.7.11.1 ko:K07154 - - - - ko00000,ko01000,ko01001,ko02048 - - - Couple_hipA,HipA_C QTD1_k127_637753_6 338969.Rfer_3066 5.538e-38 145.0 2EE95@1|root,3383J@2|Bacteria,1N8U8@1224|Proteobacteria,2VWQK@28216|Betaproteobacteria,4AI0Q@80864|Comamonadaceae 28216|Betaproteobacteria K Helix-turn-helix XRE-family like proteins - - - - - - - - - - - - HTH_31 QTD1_k127_637753_2 666685.R2APBS1_3364 3.627e-126 416.0 COG0635@1|root,COG0635@2|Bacteria,1MU76@1224|Proteobacteria,1RN6I@1236|Gammaproteobacteria,1X32N@135614|Xanthomonadales 135614|Xanthomonadales H Involved in the biosynthesis of porphyrin-containing compound - - - - - - - - - - - - HemN_C,Radical_SAM QTD1_k127_637753_7 697282.Mettu_2424 3.657e-29 118.0 COG0254@1|root,COG0254@2|Bacteria,1MZ69@1224|Proteobacteria,1SCMH@1236|Gammaproteobacteria,1XFM3@135618|Methylococcales 135618|Methylococcales J Binds the 23S rRNA rpmE - - ko:K02909 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L31 QTD1_k127_637753_1 572477.Alvin_3052 1.044e-175 558.0 COG0372@1|root,COG0372@2|Bacteria,1MUKX@1224|Proteobacteria,1RNDK@1236|Gammaproteobacteria,1WWHU@135613|Chromatiales 135613|Chromatiales C Belongs to the citrate synthase family gltA - 2.3.3.1 ko:K01647 ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00740 R00351 RC00004,RC00067 br01601,ko00000,ko00001,ko00002,ko01000 - - - Citrate_synt QTD1_k127_65054_9 1380391.JIAS01000018_gene774 6.871e-35 135.0 COG0604@1|root,COG0604@2|Bacteria,1MWBD@1224|Proteobacteria,2TS3Z@28211|Alphaproteobacteria,2JQBK@204441|Rhodospirillales 204441|Rhodospirillales C COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - 1.6.5.5 ko:K00344 - - - - ko00000,ko01000 - - - ADH_N,ADH_zinc_N QTD1_k127_65054_8 519989.ECTPHS_10911 1.265e-46 175.0 COG0440@1|root,COG0440@2|Bacteria,1RAGN@1224|Proteobacteria,1S20I@1236|Gammaproteobacteria,1WXGS@135613|Chromatiales 135613|Chromatiales E TIGRFAM Acetolactate synthase, small subunit - - 2.2.1.6 ko:K01653 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 - - - ACT_5,ALS_ss_C QTD1_k127_65054_1 1415780.JPOG01000001_gene1540 2.458e-284 884.0 COG0028@1|root,COG0028@2|Bacteria,1MU6U@1224|Proteobacteria,1RMQQ@1236|Gammaproteobacteria,1X45G@135614|Xanthomonadales 135614|Xanthomonadales E Acetolactate synthase - - 2.2.1.6 ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N QTD1_k127_65054_2 84531.JMTZ01000094_gene649 9.115e-235 755.0 COG1228@1|root,COG1228@2|Bacteria,1MY4V@1224|Proteobacteria,1RZRK@1236|Gammaproteobacteria,1X4X1@135614|Xanthomonadales 135614|Xanthomonadales Q Amidohydrolase family - - - - - - - - - - - - Amidohydro_1 QTD1_k127_65054_5 864051.BurJ1DRAFT_0701 3.976e-70 242.0 COG0346@1|root,COG0346@2|Bacteria,1RCYX@1224|Proteobacteria,2VR7R@28216|Betaproteobacteria,1KKVP@119065|unclassified Burkholderiales 28216|Betaproteobacteria E Lactoylglutathione lyase - - 4.4.1.5 ko:K01759 ko00620,map00620 - R02530 RC00004,RC00740 ko00000,ko00001,ko01000 - - - Glyoxalase QTD1_k127_65054_0 118005.AWNK01000003_gene2230 0.0 1067.0 COG1215@1|root,COG5309@1|root,COG1215@2|Bacteria,COG5309@2|Bacteria 2|Bacteria G chondroitin AC lyase activity ndvB - 2.4.1.12,3.2.1.58 ko:K00694,ko:K01210,ko:K03292 ko00500,ko01100,ko02026,map00500,map01100,map02026 - R00308,R02889,R03115 RC00005,RC00467 ko00000,ko00001,ko01000,ko01003,ko02000 2.A.2,4.D.3.1.2,4.D.3.1.5,4.D.3.1.6 GT2 - Glyco_hydro_17,Glyco_tranf_2_3,Glyco_trans_2_3,Glycos_transf_2,MFS_2 QTD1_k127_65054_4 1123377.AUIV01000007_gene1301 3.006e-80 276.0 COG0697@1|root,COG0697@2|Bacteria,1MXPW@1224|Proteobacteria,1SB7X@1236|Gammaproteobacteria,1X5BG@135614|Xanthomonadales 135614|Xanthomonadales EG EamA-like transporter family - - - - - - - - - - - - EamA QTD1_k127_65054_6 861299.J421_6033 1.269e-66 240.0 COG3324@1|root,COG3324@2|Bacteria,1ZU3H@142182|Gemmatimonadetes 142182|Gemmatimonadetes E translation initiation factor activity - - - ko:K06996 - - - - ko00000 - - - Glyoxalase QTD1_k127_65054_7 1397666.RS24_00308 5.66e-64 234.0 COG2130@1|root,COG2130@2|Bacteria,1MUC2@1224|Proteobacteria,2TQYM@28211|Alphaproteobacteria 28211|Alphaproteobacteria L NADP-dependent oxidoreductase - - - ko:K07119 - - - - ko00000 - - - ADH_N_2,ADH_zinc_N QTD1_k127_65054_11 1280954.HPO_11114 1.828e-11 75.0 COG0596@1|root,COG0596@2|Bacteria,1R8B6@1224|Proteobacteria,2V74Z@28211|Alphaproteobacteria,43Z3X@69657|Hyphomonadaceae 28211|Alphaproteobacteria S alpha/beta hydrolase fold - - - - - - - - - - - - Abhydrolase_1 QTD1_k127_65054_10 258052.JNYV01000002_gene1195 4.684e-13 83.0 COG0842@1|root,COG1131@1|root,COG1716@1|root,COG0842@2|Bacteria,COG1131@2|Bacteria,COG1716@2|Bacteria,2GKEU@201174|Actinobacteria,2M0N2@2063|Kitasatospora 201174|Actinobacteria V Forkhead associated domain - GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006810,GO:0008150,GO:0015399,GO:0015405,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030312,GO:0031224,GO:0042623,GO:0042626,GO:0043492,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - ko:K01990,ko:K21397 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane,ABC_tran,FHA QTD1_k127_65054_3 864069.MicloDRAFT_00069170 4.9e-197 624.0 COG1171@1|root,COG1171@2|Bacteria,1MVWJ@1224|Proteobacteria,2TTE1@28211|Alphaproteobacteria,1JT8D@119045|Methylobacteriaceae 28211|Alphaproteobacteria E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA ilvA GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 ko:K01754 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230 M00570 R00220,R00996 RC00418,RC02600 ko00000,ko00001,ko00002,ko01000 - - - PALP,Thr_dehydrat_C QTD1_k127_656383_4 1223521.BBJX01000004_gene2547 4.171e-20 93.0 2EGD6@1|root,33A4Z@2|Bacteria,1N733@1224|Proteobacteria,2VVS2@28216|Betaproteobacteria,4AFBH@80864|Comamonadaceae 28216|Betaproteobacteria S Protein of unknown function (DUF2892) - - - - - - - - - - - - DUF2892 QTD1_k127_656383_3 1177179.A11A3_14325 1.598e-22 108.0 COG0042@1|root,COG0042@2|Bacteria,1MV5V@1224|Proteobacteria,1RMJP@1236|Gammaproteobacteria,1XIV0@135619|Oceanospirillales 135619|Oceanospirillales J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines dusB - - ko:K05540 - - - - ko00000,ko01000,ko03016 - - - Dus QTD1_k127_656383_5 1123504.JQKD01000033_gene5245 1.966e-09 70.0 COG1273@1|root,COG1273@2|Bacteria,1QVC4@1224|Proteobacteria,2WGPK@28216|Betaproteobacteria 28216|Betaproteobacteria S TIGRFAM MJ0042 family finger-like protein - - - - - - - - - - - - DUF3426,zinc_ribbon_4,zinc_ribbon_5 QTD1_k127_656383_1 1122201.AUAZ01000003_gene2035 1.889e-59 231.0 COG2264@1|root,COG2264@2|Bacteria,1MUPC@1224|Proteobacteria,1RNAR@1236|Gammaproteobacteria,4650B@72275|Alteromonadaceae 1236|Gammaproteobacteria J Ribosomal protein L11 methyltransferase prmA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006480,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018011,GO:0018012,GO:0018022,GO:0018023,GO:0018193,GO:0018194,GO:0018205,GO:0019538,GO:0031365,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 - ko:K02687 - - - - ko00000,ko01000,ko03009 - - - PrmA QTD1_k127_656383_0 472759.Nhal_3561 9.586e-230 719.0 COG0439@1|root,COG0439@2|Bacteria,1MU4H@1224|Proteobacteria,1RMNB@1236|Gammaproteobacteria,1WWPY@135613|Chromatiales 135613|Chromatiales I TIGRFAM acetyl-CoA carboxylase, biotin carboxylase accC - 6.3.4.14,6.4.1.2 ko:K01961 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04385 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 - - - Biotin_carb_C,Biotin_carb_N,CPSase_L_D2 QTD1_k127_656383_2 1123256.KB907938_gene585 7.155e-32 126.0 COG0511@1|root,COG0511@2|Bacteria,1RCXA@1224|Proteobacteria,1S3YP@1236|Gammaproteobacteria,1X67R@135614|Xanthomonadales 135614|Xanthomonadales I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA accB - - ko:K02160 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742 RC00040,RC00367 ko00000,ko00001,ko00002 - - - Biotin_lipoyl QTD1_k127_667763_0 395964.KE386496_gene2969 1.016e-233 732.0 COG2759@1|root,COG2759@2|Bacteria,1MUR8@1224|Proteobacteria,2TRMM@28211|Alphaproteobacteria,3NASQ@45404|Beijerinckiaceae 28211|Alphaproteobacteria F formate-tetrahydrofolate ligase activity fhs - 6.3.4.3 ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R00943 RC00026,RC00111 ko00000,ko00001,ko00002,ko01000 - - - FTHFS QTD1_k127_667763_5 1123400.KB904769_gene2854 2.719e-42 159.0 COG1981@1|root,COG1981@2|Bacteria,1RHGS@1224|Proteobacteria,1S5XY@1236|Gammaproteobacteria,460VS@72273|Thiotrichales 72273|Thiotrichales S PFAM Uncharacterised protein family (UPF0093) - - - ko:K08973 - - - - ko00000 - - - UPF0093 QTD1_k127_667763_1 1382303.JPOM01000001_gene305 5.13e-213 683.0 COG3590@1|root,COG3590@2|Bacteria,1MVNQ@1224|Proteobacteria,2TRU4@28211|Alphaproteobacteria,2KEYS@204458|Caulobacterales 204458|Caulobacterales O peptidase M13 - - - ko:K07386 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M13,Peptidase_M13_N QTD1_k127_667763_4 322710.Avin_15580 8.478e-46 171.0 COG0778@1|root,COG0778@2|Bacteria,1PKUV@1224|Proteobacteria,1RNQG@1236|Gammaproteobacteria 1236|Gammaproteobacteria C Nitroreductase ydjA GO:0000166,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0010181,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050662,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - - - - - - - - - - Nitroreductase QTD1_k127_667763_3 105559.Nwat_1141 3.773e-60 223.0 COG2890@1|root,COG2890@2|Bacteria,1QVSR@1224|Proteobacteria,1T2R8@1236|Gammaproteobacteria,1X2NM@135613|Chromatiales 135613|Chromatiales J Protein of unknown function (DUF938) - - - - - - - - - - - - DUF938 QTD1_k127_667763_2 472175.EL18_00496 9.82e-75 257.0 COG0503@1|root,COG0503@2|Bacteria,1MVZ6@1224|Proteobacteria,2TV7J@28211|Alphaproteobacteria,43HJK@69277|Phyllobacteriaceae 28211|Alphaproteobacteria F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis apt - 2.4.2.7 ko:K00759 ko00230,ko01100,map00230,map01100 - R00190,R01229,R04378 RC00063 ko00000,ko00001,ko01000,ko04147 - - - Pribosyltran QTD1_k127_704451_3 1125973.JNLC01000013_gene3899 8.414e-91 310.0 COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,3JS1H@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria C Aldehyde dehydrogenase family betB - 1.2.1.8 ko:K00130 ko00260,ko01100,map00260,map01100 M00555 R02565,R02566 RC00080 ko00000,ko00001,ko00002,ko01000 - - - Aldedh QTD1_k127_704451_0 1133849.O3I_018415 2.109e-265 826.0 COG0531@1|root,COG0531@2|Bacteria,2GIWQ@201174|Actinobacteria,4FZW7@85025|Nocardiaceae 201174|Actinobacteria E Amino acid permease - - - - - - - - - - - - AA_permease_2 QTD1_k127_704451_1 1411123.JQNH01000001_gene2319 1.18e-217 681.0 COG0665@1|root,COG0665@2|Bacteria,1MVM6@1224|Proteobacteria,2TRM7@28211|Alphaproteobacteria 28211|Alphaproteobacteria E Sarcosine oxidase, beta subunit - - 1.5.3.1 ko:K00303 ko00260,ko01100,map00260,map01100 - R00610 RC00060,RC00557 ko00000,ko00001,ko01000 - - - DAO QTD1_k127_704451_4 1090320.KB900605_gene2347 1.803e-36 141.0 COG4311@1|root,COG4311@2|Bacteria,1MZC3@1224|Proteobacteria,2UC8C@28211|Alphaproteobacteria,2K67W@204457|Sphingomonadales 204457|Sphingomonadales E Sarcosine oxidase delta subunit - - 1.5.3.1 ko:K00304 ko00260,ko01100,map00260,map01100 - R00610 RC00060,RC00557 ko00000,ko00001,ko01000 - - - SoxD QTD1_k127_704451_2 1125973.JNLC01000013_gene3914 1.237e-187 606.0 COG0404@1|root,COG0446@1|root,COG0404@2|Bacteria,COG0446@2|Bacteria,1MVEK@1224|Proteobacteria,2TTD7@28211|Alphaproteobacteria,3JTMR@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria E Glycine cleavage T-protein C-terminal barrel domain - - 1.5.3.1 ko:K00302 ko00260,ko01100,map00260,map01100 - R00610 RC00060,RC00557 ko00000,ko00001,ko01000 - - - FAD_oxidored,Fer2_4,GCV_T,GCV_T_C,Pyr_redox_2 QTD1_k127_722178_2 1157708.KB907450_gene5778 4.957e-44 168.0 COG0477@1|root,COG0477@2|Bacteria,1MWXZ@1224|Proteobacteria,2VNYR@28216|Betaproteobacteria,4AJ6B@80864|Comamonadaceae 28216|Betaproteobacteria P Transmembrane secretion effector - - - - - - - - - - - - MFS_1 QTD1_k127_722178_0 670307.HYPDE_33213 2.615e-178 576.0 COG3011@1|root,COG3011@2|Bacteria,1N0MB@1224|Proteobacteria 1224|Proteobacteria S Lipase maturation factor - - - - - - - - - - - - DUF393,LMF1 QTD1_k127_722178_1 292564.Cyagr_0805 1.155e-52 196.0 COG0645@1|root,COG2187@1|root,COG0645@2|Bacteria,COG2187@2|Bacteria,1FZW6@1117|Cyanobacteria,22THH@167375|Cyanobium 1117|Cyanobacteria S AAA domain - - - ko:K07028 - - - - ko00000 - - - AAA_33,APH QTD1_k127_722537_17 1549858.MC45_03315 1.52e-06 50.0 COG1937@1|root,COG1937@2|Bacteria,1N6ZN@1224|Proteobacteria,2U9SD@28211|Alphaproteobacteria,2K5ZX@204457|Sphingomonadales 204457|Sphingomonadales S Metal-sensitive transcriptional repressor - - - - - - - - - - - - Trns_repr_metal QTD1_k127_722537_13 215803.DB30_0207 7.791e-21 104.0 COG0517@1|root,COG0517@2|Bacteria,1N68U@1224|Proteobacteria,42UEN@68525|delta/epsilon subdivisions,2X9VF@28221|Deltaproteobacteria,2YVE6@29|Myxococcales 28221|Deltaproteobacteria K Domain in cystathionine beta-synthase and other proteins. - - - - - - - - - - - - CBS QTD1_k127_722537_0 349521.HCH_04995 1.973e-227 724.0 COG3320@1|root,COG4221@1|root,COG3320@2|Bacteria,COG4221@2|Bacteria,1QSHC@1224|Proteobacteria,1RQP8@1236|Gammaproteobacteria,1XMDW@135619|Oceanospirillales 135619|Oceanospirillales M dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes - - - - - - - - - - - - NAD_binding_4,adh_short QTD1_k127_722537_5 1123377.AUIV01000001_gene948 3.029e-115 387.0 COG1020@1|root,COG1020@2|Bacteria,1N7HY@1224|Proteobacteria,1S1HS@1236|Gammaproteobacteria,1X48P@135614|Xanthomonadales 135614|Xanthomonadales Q Protein of unknown function (DUF1298) - - - - - - - - - - - - DUF1298,WES_acyltransf QTD1_k127_722537_8 1123377.AUIV01000002_gene1152 1.536e-60 219.0 COG0457@1|root,COG0457@2|Bacteria,1R3PT@1224|Proteobacteria,1T2HT@1236|Gammaproteobacteria,1X382@135614|Xanthomonadales 135614|Xanthomonadales S Tetratricopeptide repeat - - - - - - - - - - - - - QTD1_k127_722537_15 1385517.N800_04635 3.401e-12 73.0 COG3937@1|root,COG3937@2|Bacteria,1N1EW@1224|Proteobacteria,1SDB2@1236|Gammaproteobacteria,1X717@135614|Xanthomonadales 135614|Xanthomonadales S Poly(hydroxyalcanoate) granule associated protein - - - - - - - - - - - - Phasin QTD1_k127_722537_7 1454004.AW11_03509 6.778e-104 351.0 COG1752@1|root,COG1752@2|Bacteria,1R7RX@1224|Proteobacteria,2VMTI@28216|Betaproteobacteria 28216|Betaproteobacteria S Patatin-like phospholipase - - - - - - - - - - - - Patatin QTD1_k127_722537_11 977880.RALTA_A1014 7.695e-37 151.0 COG1075@1|root,COG1075@2|Bacteria,1N3FV@1224|Proteobacteria,2WFKG@28216|Betaproteobacteria,1K0BZ@119060|Burkholderiaceae 28216|Betaproteobacteria S Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - - - - - - - - - - Abhydrolase_1,Abhydrolase_6,Hydrolase_4,PGAP1 QTD1_k127_722537_10 1384054.N790_00740 5.579e-40 156.0 2AYXV@1|root,31R3M@2|Bacteria,1RBR9@1224|Proteobacteria,1S7M9@1236|Gammaproteobacteria,1X656@135614|Xanthomonadales 135614|Xanthomonadales - - - - - - - - - - - - - - - QTD1_k127_722537_1 1123253.AUBD01000005_gene117 1.763e-205 657.0 COG2303@1|root,COG2303@2|Bacteria,1MV19@1224|Proteobacteria,1RMD2@1236|Gammaproteobacteria,1X3AK@135614|Xanthomonadales 135614|Xanthomonadales E Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate - - 1.1.99.1 ko:K00108 ko00260,ko01100,map00260,map01100 M00555 R01025 RC00087 ko00000,ko00001,ko00002,ko01000 - - - GMC_oxred_C,GMC_oxred_N QTD1_k127_722537_9 1121377.KB906399_gene1765 7.044e-48 182.0 COG2085@1|root,COG2085@2|Bacteria,1WMWM@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S NADP oxidoreductase coenzyme F420-dependent - - - - - - - - - - - - F420_oxidored QTD1_k127_722537_4 56780.SYN_01802 4.921e-121 402.0 COG0635@1|root,COG0635@2|Bacteria,1MV1I@1224|Proteobacteria,42MN3@68525|delta/epsilon subdivisions,2WMHC@28221|Deltaproteobacteria,2MQVK@213462|Syntrophobacterales 28221|Deltaproteobacteria C Elongator protein 3, MiaB family, Radical SAM - - - - - - - - - - - - Radical_SAM QTD1_k127_722537_14 2340.JV46_14270 1.275e-16 88.0 COG1394@1|root,COG1394@2|Bacteria,1RJ1P@1224|Proteobacteria,1S75D@1236|Gammaproteobacteria 1236|Gammaproteobacteria C ATP synthase subunit D - - - ko:K02120 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002 3.A.2.2,3.A.2.3 - - ATP-synt_D QTD1_k127_722537_2 2340.JV46_14280 3.207e-192 614.0 COG1156@1|root,COG1156@2|Bacteria,1QUQE@1224|Proteobacteria,1T210@1236|Gammaproteobacteria,1JC0C@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria C Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit - - - - - - - - - - - - ATP-synt_ab QTD1_k127_722537_3 1232410.KI421413_gene553 1.632e-180 582.0 COG1155@1|root,COG1155@2|Bacteria,1MWRR@1224|Proteobacteria,42NKK@68525|delta/epsilon subdivisions,2WIQQ@28221|Deltaproteobacteria,43UIJ@69541|Desulfuromonadales 28221|Deltaproteobacteria C ATPsynthase alpha/beta subunit N-term extension - - 3.6.3.14,3.6.3.15 ko:K02117 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002,ko01000 3.A.2.2,3.A.2.3 - - ATP-synt_ab,ATP-synt_ab_N,ATP-synt_ab_Xtn QTD1_k127_722537_18 768671.ThimaDRAFT_4704 8.696e-05 53.0 2DXMK@1|root,32V3Q@2|Bacteria,1N6HJ@1224|Proteobacteria,1SB4I@1236|Gammaproteobacteria,1WZ1G@135613|Chromatiales 135613|Chromatiales - - - - - - - - - - - - - - - QTD1_k127_722537_16 765912.Thimo_2266 2.416e-09 65.0 COG1436@1|root,COG1436@2|Bacteria,1NFVS@1224|Proteobacteria,1SF77@1236|Gammaproteobacteria,1WZH0@135613|Chromatiales 135613|Chromatiales C ATP synthase (F/14-kDa) subunit - - - - - - - - - - - - ATP-synt_F QTD1_k127_722537_12 1249627.D779_2944 1.276e-24 107.0 COG0636@1|root,COG0636@2|Bacteria,1N5D3@1224|Proteobacteria,1SBV1@1236|Gammaproteobacteria,1WZ48@135613|Chromatiales 135613|Chromatiales U Belongs to the V-ATPase proteolipid subunit family - - - ko:K02124 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002 3.A.2.2,3.A.2.3 - - ATP-synt_C QTD1_k127_722537_6 2340.JV46_14330 8.178e-112 388.0 COG1269@1|root,COG1269@2|Bacteria,1R6B8@1224|Proteobacteria,1RYT3@1236|Gammaproteobacteria 1236|Gammaproteobacteria U Belongs to the V-ATPase 116 kDa subunit family - - - ko:K02123 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002 3.A.2.2,3.A.2.3 - - V_ATPase_I QTD1_k127_745098_19 1238182.C882_4460 2.801e-12 68.0 2ATAH@1|root,31ITJ@2|Bacteria,1RIQF@1224|Proteobacteria,2UD6U@28211|Alphaproteobacteria,2JTD0@204441|Rhodospirillales 204441|Rhodospirillales - - - - - - - - - - - - - - - QTD1_k127_745098_14 485915.Dret_0955 2.787e-45 170.0 2B047@1|root,31SEM@2|Bacteria,1RHZY@1224|Proteobacteria,42V93@68525|delta/epsilon subdivisions,2WVVI@28221|Deltaproteobacteria,2MCS3@213115|Desulfovibrionales 28221|Deltaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_745098_1 523791.Kkor_2176 4.456e-247 782.0 COG0568@1|root,COG0568@2|Bacteria,1MVNJ@1224|Proteobacteria,1RMQI@1236|Gammaproteobacteria,1XHWC@135619|Oceanospirillales 135619|Oceanospirillales K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth rpoD - - ko:K03086 - - - - ko00000,ko03021 - - - Sigma70_ner,Sigma70_r1_1,Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4 QTD1_k127_745098_2 1163407.UU7_06943 1.715e-164 537.0 COG0358@1|root,COG0358@2|Bacteria,1MUHC@1224|Proteobacteria,1RMGA@1236|Gammaproteobacteria,1X4K0@135614|Xanthomonadales 135614|Xanthomonadales L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication dnaG - - ko:K02316 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - DnaB_bind,DnaG_DnaB_bind,Toprim_2,Toprim_4,Toprim_N,zf-CHC2 QTD1_k127_745098_13 765911.Thivi_4082 7.187e-50 181.0 COG1610@1|root,COG1610@2|Bacteria,1RGZS@1224|Proteobacteria,1S61A@1236|Gammaproteobacteria,1WYDV@135613|Chromatiales 135613|Chromatiales S Yqey-like protein - - - ko:K09117 - - - - ko00000 - - - YqeY QTD1_k127_745098_18 767434.Fraau_2730 1.375e-23 101.0 COG0828@1|root,COG0828@2|Bacteria,1MZCC@1224|Proteobacteria,1S8QZ@1236|Gammaproteobacteria,1X7FD@135614|Xanthomonadales 135614|Xanthomonadales J Belongs to the bacterial ribosomal protein bS21 family rpsU GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - ko:K02970 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S21 QTD1_k127_745098_4 1470591.BW41_01969 4.813e-139 477.0 COG0457@1|root,COG3577@1|root,COG0457@2|Bacteria,COG3577@2|Bacteria,1MVIW@1224|Proteobacteria,2TV3Y@28211|Alphaproteobacteria,2KCMD@204457|Sphingomonadales 204457|Sphingomonadales S gag-polyprotein putative aspartyl protease - - - - - - - - - - - - Asp_protease_2 QTD1_k127_745098_5 593105.S7A_01415 1.195e-125 420.0 COG0533@1|root,COG0533@2|Bacteria,1MU6S@1224|Proteobacteria,1RN8M@1236|Gammaproteobacteria,3VZTU@53335|Pantoea 1236|Gammaproteobacteria O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction tsaD GO:0000287,GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140030,GO:0140032,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 ko:K01409 - - R10648 RC00070,RC00416 ko00000,ko01000,ko03016 - - - Peptidase_M22 QTD1_k127_745098_17 1131451.O1K_10517 2.261e-37 144.0 COG1539@1|root,COG1539@2|Bacteria,1MZ8Z@1224|Proteobacteria,1S9B2@1236|Gammaproteobacteria,1X6GF@135614|Xanthomonadales 135614|Xanthomonadales H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin folB - 1.13.11.81,4.1.2.25,5.1.99.8 ko:K01633 ko00790,ko01100,map00790,map01100 M00126,M00840 R03504,R11037,R11073 RC00721,RC00943,RC01479,RC03333,RC03334 ko00000,ko00001,ko00002,ko01000 - - - FolB QTD1_k127_745098_15 1234364.AMSF01000085_gene2957 9.035e-43 162.0 COG0801@1|root,COG0801@2|Bacteria,1RHNN@1224|Proteobacteria,1S62M@1236|Gammaproteobacteria,1X6J5@135614|Xanthomonadales 135614|Xanthomonadales H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase folK1 - 2.7.6.3 ko:K00950 ko00790,ko01100,map00790,map01100 M00126,M00841 R03503 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - HPPK QTD1_k127_745098_10 870187.Thini_1695 1.946e-83 284.0 COG1028@1|root,COG1028@2|Bacteria,1MUUV@1224|Proteobacteria,1RMJU@1236|Gammaproteobacteria,463MH@72273|Thiotrichales 72273|Thiotrichales IQ KR domain - - - - - - - - - - - - adh_short_C2 QTD1_k127_745098_8 768671.ThimaDRAFT_2010 5.274e-106 357.0 COG1565@1|root,COG1565@2|Bacteria,1N3CJ@1224|Proteobacteria,1RYCJ@1236|Gammaproteobacteria,1WWJG@135613|Chromatiales 135613|Chromatiales S Putative S-adenosyl-L-methionine-dependent methyltransferase - - - - - - - - - - - - Methyltransf_28 QTD1_k127_745098_7 1267535.KB906767_gene2341 1.224e-113 373.0 COG1968@1|root,COG1968@2|Bacteria,3Y6B6@57723|Acidobacteria,2JKDH@204432|Acidobacteriia 204432|Acidobacteriia M Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP) uppP - 3.6.1.27 ko:K06153 ko00550,map00550 - R05627 RC00002 ko00000,ko00001,ko01000,ko01011 - - - BacA QTD1_k127_745098_3 396588.Tgr7_0331 2.47e-162 522.0 COG0617@1|root,COG0617@2|Bacteria,1MU2X@1224|Proteobacteria,1RPFJ@1236|Gammaproteobacteria,1WWKR@135613|Chromatiales 135613|Chromatiales J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases cca - 2.7.7.72 ko:K00974 ko03013,map03013 - R09382,R09383,R09384,R09386 RC00078 ko00000,ko00001,ko01000,ko03016 - - - HD,PolyA_pol,PolyA_pol_RNAbd QTD1_k127_745098_9 1005048.CFU_3994 3.772e-87 301.0 COG4324@1|root,COG4324@2|Bacteria,1N0FE@1224|Proteobacteria,2VH73@28216|Betaproteobacteria,476PV@75682|Oxalobacteraceae 28216|Betaproteobacteria S Putative aminopeptidase - - - - - - - - - - - - Aminopep QTD1_k127_745098_12 196367.JNFG01000007_gene6763 3.224e-53 197.0 2DNM2@1|root,32Y26@2|Bacteria,1N7KR@1224|Proteobacteria,2WFQB@28216|Betaproteobacteria,1KI4S@119060|Burkholderiaceae 28216|Betaproteobacteria S Lipocalin-like domain - - - - - - - - - - - - Lipocalin_5 QTD1_k127_745098_11 1384056.N787_06845 2.798e-73 264.0 COG0702@1|root,COG0702@2|Bacteria,1MW54@1224|Proteobacteria,1RNS7@1236|Gammaproteobacteria,1XC7M@135614|Xanthomonadales 135614|Xanthomonadales GM NmrA-like family - - 1.6.5.3,1.6.99.3 ko:K00329,ko:K00356 ko00190,map00190 - R11945 RC00061 ko00000,ko00001,ko01000 - - - NAD_binding_10 QTD1_k127_745098_6 519989.ECTPHS_09403 6.683e-121 398.0 COG0265@1|root,COG0265@2|Bacteria,1MU63@1224|Proteobacteria,1RN9T@1236|Gammaproteobacteria,1WX0Q@135613|Chromatiales 135613|Chromatiales O Belongs to the peptidase S1C family - - 3.4.21.107 ko:K04771,ko:K04772 ko01503,ko02020,map01503,map02020 M00728 - - ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 - - - PDZ,PDZ_2,Trypsin_2 QTD1_k127_745098_16 396588.Tgr7_2957 1.175e-39 153.0 COG0071@1|root,COG0071@2|Bacteria,1N7C7@1224|Proteobacteria,1S607@1236|Gammaproteobacteria,1WYTK@135613|Chromatiales 135613|Chromatiales O Belongs to the small heat shock protein (HSP20) family - - - ko:K13993 ko04141,map04141 - - - ko00000,ko00001,ko03110 - - - HSP20 QTD1_k127_745098_0 1234364.AMSF01000090_gene2456 0.0 1024.0 COG0209@1|root,COG0209@2|Bacteria,1MUJ8@1224|Proteobacteria,1RQUR@1236|Gammaproteobacteria,1X2Z8@135614|Xanthomonadales 135614|Xanthomonadales F Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen - - 1.17.4.1 ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R02017,R02018,R02019,R02024 RC00613 ko00000,ko00001,ko00002,ko01000,ko03400 - - - LAGLIDADG_3,Ribonuc_red_lgC,Ribonuc_red_lgN QTD1_k127_752329_13 391038.Bphy_0095 9.626e-37 143.0 COG2080@1|root,COG2080@2|Bacteria,1RD8C@1224|Proteobacteria,2VQ75@28216|Betaproteobacteria,1K1AG@119060|Burkholderiaceae 28216|Betaproteobacteria C carbon monoxide dehydrogenase coxS - 1.2.5.3 ko:K03518 - - R11168 RC02800 ko00000,ko01000 - - - Fer2,Fer2_2 QTD1_k127_752329_7 1382359.JIAL01000001_gene2392 1.411e-83 289.0 COG2333@1|root,COG2333@2|Bacteria,3Y323@57723|Acidobacteria,2JHP4@204432|Acidobacteriia 204432|Acidobacteriia S Metallo-beta-lactamase superfamily - - - - - - - - - - - - Lactamase_B QTD1_k127_752329_15 1184609.KILIM_019_00250 4.269e-14 81.0 COG1716@1|root,COG1716@2|Bacteria,2GKA7@201174|Actinobacteria,4F6WA@85018|Dermatophilaceae 201174|Actinobacteria T Forkhead associated domain fhaB GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0009987,GO:0016020,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0050896,GO:0051301,GO:0051704,GO:0071944 - - - - - - - - - - FHA,Yop-YscD_cpl QTD1_k127_752329_16 981384.AEYW01000001_gene1629 1.018e-11 74.0 COG2267@1|root,COG3710@1|root,COG2267@2|Bacteria,COG3710@2|Bacteria 2|Bacteria K Transcriptional regulator - - - - - - - - - - - - AAA_16,Abhydrolase_1,GerE,Trans_reg_C QTD1_k127_752329_0 1336208.JADY01000035_gene2404 5.602e-290 907.0 COG2217@1|root,COG2217@2|Bacteria,1MU08@1224|Proteobacteria,2TR80@28211|Alphaproteobacteria,2JPCQ@204441|Rhodospirillales 204441|Rhodospirillales P COG2217 Cation transport ATPase - - 3.6.3.54 ko:K17686 ko01524,ko04016,map01524,map04016 - R00086 RC00002 ko00000,ko00001,ko01000 3.A.3.5 - - E1-E2_ATPase,HMA,Hydrolase,YHS QTD1_k127_752329_11 1380394.JADL01000004_gene6024 2.357e-64 222.0 COG5649@1|root,COG5649@2|Bacteria,1RGY3@1224|Proteobacteria,2U9AG@28211|Alphaproteobacteria,2JSU4@204441|Rhodospirillales 204441|Rhodospirillales S Domain of unknown function (DU1801) - - - - - - - - - - - - DUF1801 QTD1_k127_752329_5 626887.J057_10556 4.112e-118 403.0 COG3239@1|root,COG3239@2|Bacteria,1MY4I@1224|Proteobacteria,1S10P@1236|Gammaproteobacteria 1236|Gammaproteobacteria I Fatty acid desaturase - - 1.14.19.23,1.14.19.45 ko:K10255 ko02020,map02020 - - - ko00000,ko00001,ko01000,ko01004 - - - FA_desaturase QTD1_k127_752329_8 543728.Vapar_5738 1.962e-74 251.0 COG0346@1|root,COG0346@2|Bacteria,1RCGK@1224|Proteobacteria,2VQTH@28216|Betaproteobacteria,4AFZV@80864|Comamonadaceae 28216|Betaproteobacteria E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - - - - - - - - - - Glyoxalase QTD1_k127_752329_10 1458357.BG58_39620 4.87e-65 226.0 COG2207@1|root,COG2207@2|Bacteria,1RD0U@1224|Proteobacteria,2VS6F@28216|Betaproteobacteria,1K6ZU@119060|Burkholderiaceae 28216|Betaproteobacteria K AraC family - - - - - - - - - - - - HTH_18 QTD1_k127_752329_9 105559.Nwat_2097 3.936e-68 254.0 COG2982@1|root,COG2982@2|Bacteria,1NVUY@1224|Proteobacteria,1RPFM@1236|Gammaproteobacteria,1WXRZ@135613|Chromatiales 135613|Chromatiales M PFAM AsmA family protein - - - ko:K07289 - - - - ko00000 - - - AsmA QTD1_k127_752329_2 485917.Phep_2886 2.734e-186 608.0 COG1501@1|root,COG1501@2|Bacteria 2|Bacteria G Belongs to the glycosyl hydrolase 31 family - - 3.2.1.1,3.2.1.22 ko:K01176,ko:K07407 ko00052,ko00500,ko00561,ko00600,ko00603,ko01100,ko04973,map00052,map00500,map00561,map00600,map00603,map01100,map04973 - R01101,R01103,R01104,R01194,R01329,R02108,R02112,R02926,R03634,R04019,R04470,R05549,R05961,R06091,R11262 RC00049,RC00059,RC00451 ko00000,ko00001,ko01000 - GH13 - Alpha-amylase,CBM26,CHB_HEX_C_1,Glyco_hydro_31,Melibiase QTD1_k127_752329_1 648757.Rvan_2642 1.181e-243 765.0 COG0028@1|root,COG0028@2|Bacteria,1PGJD@1224|Proteobacteria,2V7UA@28211|Alphaproteobacteria,3N91E@45401|Hyphomicrobiaceae 28211|Alphaproteobacteria EH Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - 2.2.1.6 ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N QTD1_k127_752329_12 631362.Thi970DRAFT_03248 7.082e-47 177.0 COG2078@1|root,COG2078@2|Bacteria,1RJP4@1224|Proteobacteria,1S6FG@1236|Gammaproteobacteria,1WY34@135613|Chromatiales 135613|Chromatiales S pfam ammecr1 - - - ko:K09141 - - - - ko00000 - - - AMMECR1 QTD1_k127_752329_6 522306.CAP2UW1_2625 7.912e-86 293.0 COG1355@1|root,COG1355@2|Bacteria,1MXK5@1224|Proteobacteria,2VKXP@28216|Betaproteobacteria 28216|Betaproteobacteria S Belongs to the MEMO1 family - - - ko:K06990 - - - - ko00000,ko04812 - - - AMMECR1,Memo QTD1_k127_752329_3 314278.NB231_00435 3.022e-182 576.0 COG1180@1|root,COG1180@2|Bacteria,1NQC1@1224|Proteobacteria,1T0C6@1236|Gammaproteobacteria,1WXH4@135613|Chromatiales 135613|Chromatiales C PFAM Radical SAM - - 1.97.1.4 ko:K04069 - - R04710 - ko00000,ko01000 - - - Fer4_12,Radical_SAM QTD1_k127_752329_4 1384056.N787_06630 2.441e-121 400.0 COG2197@1|root,COG2267@1|root,COG2197@2|Bacteria,COG2267@2|Bacteria,1QYHB@1224|Proteobacteria,1T613@1236|Gammaproteobacteria 1236|Gammaproteobacteria K helix_turn_helix, Lux Regulon - - - - - - - - - - - - GerE QTD1_k127_752329_14 1196835.A458_06010 2.237e-14 76.0 COG2944@1|root,COG2944@2|Bacteria,1MZGM@1224|Proteobacteria,1TBCN@1236|Gammaproteobacteria,1Z37I@136846|Pseudomonas stutzeri group 1236|Gammaproteobacteria K Transcriptional regulator - - - ko:K07726 - - - - ko00000,ko03000 - - - HTH_3 QTD1_k127_765559_5 640081.Dsui_1606 5.292e-33 134.0 COG0265@1|root,COG0265@2|Bacteria,1MU63@1224|Proteobacteria,2VI4Q@28216|Betaproteobacteria,2KVHE@206389|Rhodocyclales 206389|Rhodocyclales O Belongs to the peptidase S1C family - - 3.4.21.107 ko:K04771 ko01503,ko02020,map01503,map02020 M00728 - - ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 - - - PDZ,PDZ_2,Trypsin_2 QTD1_k127_765559_2 1049564.TevJSym_as00240 4.268e-108 368.0 COG0815@1|root,COG0815@2|Bacteria,1MUBU@1224|Proteobacteria,1RM8M@1236|Gammaproteobacteria,1J4WW@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria M Transfers the fatty acyl group on membrane lipoproteins lnt GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016021,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031224,GO:0031226,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576 - ko:K03820 - - - - ko00000,ko01000 - GT2 iEcSMS35_1347.EcSMS35_0678,iSbBS512_1146.SbBS512_E0590 CN_hydrolase QTD1_k127_765559_4 1122603.ATVI01000013_gene1326 2.655e-93 319.0 COG4535@1|root,COG4535@2|Bacteria,1QTU8@1224|Proteobacteria,1RMKX@1236|Gammaproteobacteria,1X3M9@135614|Xanthomonadales 135614|Xanthomonadales P Transporter corC - - ko:K06189 - - - - ko00000,ko02000 9.A.40.1.2 - - CBS,CorC_HlyC QTD1_k127_765559_6 1461579.CCNK01000027_gene867 1.599e-32 136.0 COG0319@1|root,COG0319@2|Bacteria,1MZ67@1224|Proteobacteria,1S6BS@1236|Gammaproteobacteria,1Y8GN@135625|Pasteurellales 135625|Pasteurellales J Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA ybeY - - ko:K07042 - - - - ko00000,ko03009 - - - UPF0054 QTD1_k127_765559_1 396588.Tgr7_2291 1.362e-123 403.0 COG1702@1|root,COG1702@2|Bacteria,1MVDV@1224|Proteobacteria,1RP2Y@1236|Gammaproteobacteria,1WW3U@135613|Chromatiales 135613|Chromatiales T PFAM PhoH family protein - - - ko:K06217 - - - - ko00000 - - - PhoH QTD1_k127_765559_0 396588.Tgr7_2292 7.021e-207 651.0 COG0621@1|root,COG0621@2|Bacteria,1MURS@1224|Proteobacteria,1RMD8@1236|Gammaproteobacteria,1WWN1@135613|Chromatiales 135613|Chromatiales J Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine miaB - 2.8.4.3 ko:K06168 - - R10645,R10646,R10647 RC00003,RC00980,RC03221,RC03222 ko00000,ko01000,ko03016 - - - Radical_SAM,TRAM,UPF0004 QTD1_k127_765559_3 1280948.HY36_00635 2.637e-94 335.0 COG1506@1|root,COG1506@2|Bacteria,1MUJ3@1224|Proteobacteria,2TUZZ@28211|Alphaproteobacteria,43W55@69657|Hyphomonadaceae 28211|Alphaproteobacteria E Peptidase S9 prolyl oligopeptidase active site - - - - - - - - - - - - Peptidase_S9 QTD1_k127_765559_7 1158150.KB906243_gene1864 5.403e-14 75.0 COG0629@1|root,COG0629@2|Bacteria,1RCWT@1224|Proteobacteria,1S3WP@1236|Gammaproteobacteria 1236|Gammaproteobacteria L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism ssb - - ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 - - - ko00000,ko00001,ko03029,ko03032,ko03400 - - - SSB QTD1_k127_783393_2 118163.Ple7327_2828 1.065e-105 359.0 COG0534@1|root,COG0534@2|Bacteria,1G2M4@1117|Cyanobacteria,3VKQV@52604|Pleurocapsales 1117|Cyanobacteria V efflux protein, MATE family - - - ko:K03327 - - - - ko00000,ko02000 2.A.66.1 - - MatE QTD1_k127_783393_5 1254432.SCE1572_47310 4.677e-78 275.0 COG1475@1|root,COG1475@2|Bacteria,1Q2AH@1224|Proteobacteria,437X8@68525|delta/epsilon subdivisions,2X9QN@28221|Deltaproteobacteria,2YUMN@29|Myxococcales 28221|Deltaproteobacteria K ParB-like nuclease domain - - - ko:K03497 - - - - ko00000,ko03000,ko03036,ko04812 - - - ParBc QTD1_k127_783393_0 84531.JMTZ01000059_gene2528 5.393e-214 692.0 COG1472@1|root,COG1472@2|Bacteria,1MVIV@1224|Proteobacteria,1RMA0@1236|Gammaproteobacteria,1X38M@135614|Xanthomonadales 135614|Xanthomonadales G COG1472 Beta-glucosidase-related glycosidases celD - 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - GH3 - Glyco_hydro_3,Glyco_hydro_3_C QTD1_k127_783393_10 272560.BPSS0057 2.616e-23 107.0 COG1595@1|root,COG1595@2|Bacteria,1MX7T@1224|Proteobacteria,2VR5K@28216|Betaproteobacteria,1K265@119060|Burkholderiaceae 28216|Betaproteobacteria K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 QTD1_k127_783393_3 745411.B3C1_01600 1.54e-99 350.0 COG1629@1|root,COG1629@2|Bacteria,1NWW8@1224|Proteobacteria,1RNKZ@1236|Gammaproteobacteria 1236|Gammaproteobacteria P Capsule assembly protein Wzi - - - - - - - - - - - - Caps_assemb_Wzi QTD1_k127_783393_9 582899.Hden_1822 2.276e-34 142.0 COG0782@1|root,COG0782@2|Bacteria,1RHU5@1224|Proteobacteria,2U95I@28211|Alphaproteobacteria,3N8XC@45401|Hyphomicrobiaceae 28211|Alphaproteobacteria J Transcription elongation factor - - - - - - - - - - - - GreA_GreB QTD1_k127_783393_6 215803.DB30_6391 3.024e-72 255.0 COG1028@1|root,COG1028@2|Bacteria,1P9R4@1224|Proteobacteria,42TE9@68525|delta/epsilon subdivisions,2WPGF@28221|Deltaproteobacteria,2YUH5@29|Myxococcales 28221|Deltaproteobacteria IQ Belongs to the short-chain dehydrogenases reductases (SDR) family - - - - - - - - - - - - adh_short QTD1_k127_783393_8 1278309.KB907109_gene3244 1.723e-36 149.0 COG0526@1|root,COG0526@2|Bacteria,1MZ36@1224|Proteobacteria,1S8UU@1236|Gammaproteobacteria,1XKMI@135619|Oceanospirillales 135619|Oceanospirillales CO Thiol-disulfide isomerase and thioredoxins - - - - - - - - - - - - AhpC-TSA,Redoxin QTD1_k127_783393_7 1122604.JONR01000003_gene1372 1.543e-65 234.0 COG2095@1|root,COG2095@2|Bacteria,1MV1C@1224|Proteobacteria,1RPM8@1236|Gammaproteobacteria,1X74S@135614|Xanthomonadales 135614|Xanthomonadales U MarC family integral membrane protein - - - ko:K05595 - - - - ko00000,ko02000 2.A.95.1 - - MarC QTD1_k127_783393_1 1123073.KB899242_gene1518 6.538e-162 529.0 COG0769@1|root,COG0769@2|Bacteria,1R52S@1224|Proteobacteria,1RVEK@1236|Gammaproteobacteria,1X9R1@135614|Xanthomonadales 135614|Xanthomonadales M Mur ligase family, glutamate ligase domain - - - - - - - - - - - - Mur_ligase_C,Mur_ligase_M QTD1_k127_783393_4 1121013.P873_12400 2.053e-81 276.0 COG0189@1|root,COG0769@1|root,COG0189@2|Bacteria,COG0769@2|Bacteria,1MVN2@1224|Proteobacteria,1RS1C@1236|Gammaproteobacteria,1X7FN@135614|Xanthomonadales 135614|Xanthomonadales HJ Prokaryotic glutathione synthetase, ATP-grasp domain - - 6.3.2.29,6.3.2.30 ko:K03802 - - - - ko00000,ko01000 - - - Acetyltransf_1,Mur_ligase_C,Mur_ligase_M,RimK QTD1_k127_802577_0 1469245.JFBG01000077_gene318 7.399e-222 698.0 COG1048@1|root,COG1048@2|Bacteria,1MU9T@1224|Proteobacteria,1RN5I@1236|Gammaproteobacteria,1WW6D@135613|Chromatiales 135613|Chromatiales C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate - - 4.2.1.3 ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00173,M00740 R01324,R01325,R01900 RC00497,RC00498,RC00618 br01601,ko00000,ko00001,ko00002,ko01000 - - - Aconitase,Aconitase_C QTD1_k127_802577_4 1122139.KB907887_gene176 3.263e-127 417.0 COG0482@1|root,COG0482@2|Bacteria,1MUT1@1224|Proteobacteria,1RMAK@1236|Gammaproteobacteria,1XI26@135619|Oceanospirillales 135619|Oceanospirillales J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 mnmA - 2.8.1.13 ko:K00566 ko04122,map04122 - R08700 RC02313,RC02315 ko00000,ko00001,ko01000,ko03016 - - - tRNA_Me_trans QTD1_k127_802577_9 314278.NB231_06990 3.354e-22 104.0 COG2153@1|root,COG2153@2|Bacteria,1N7TN@1224|Proteobacteria,1SCI6@1236|Gammaproteobacteria,1WYQK@135613|Chromatiales 135613|Chromatiales S protein acetylation - - - - - - - - - - - - - QTD1_k127_802577_3 1121013.P873_00570 9.94e-156 503.0 COG0015@1|root,COG0015@2|Bacteria,1MV4B@1224|Proteobacteria,1RN93@1236|Gammaproteobacteria,1X3E0@135614|Xanthomonadales 135614|Xanthomonadales F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily purB - 4.3.2.2 ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048,M00049 R01083,R04559 RC00379,RC00444,RC00445 ko00000,ko00001,ko00002,ko01000 - - - ASL_C,Lyase_1 QTD1_k127_802577_1 1122604.JONR01000001_gene1738 2.109e-199 632.0 COG0114@1|root,COG0114@2|Bacteria,1MUQI@1224|Proteobacteria,1RNUS@1236|Gammaproteobacteria,1X3ED@135614|Xanthomonadales 135614|Xanthomonadales C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate fumC - 4.2.1.2 ko:K01679 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211 M00009,M00011,M00173,M00376 R01082 RC00443 ko00000,ko00001,ko00002,ko01000 - - - FumaraseC_C,Lyase_1 QTD1_k127_802577_8 1089551.KE386572_gene4092 1.555e-45 173.0 COG0494@1|root,COG0494@2|Bacteria,1RD2C@1224|Proteobacteria,2TV3Q@28211|Alphaproteobacteria,4BQP3@82117|unclassified Alphaproteobacteria 28211|Alphaproteobacteria L NUDIX domain MA20_44635 - - - - - - - - - - - NUDIX QTD1_k127_802577_7 713586.KB900536_gene2767 4.848e-78 275.0 COG1694@1|root,COG3956@2|Bacteria,1MVKM@1224|Proteobacteria,1RNVU@1236|Gammaproteobacteria,1WVUJ@135613|Chromatiales 135613|Chromatiales C PFAM MazG nucleotide pyrophosphohydrolase mazG - 3.6.1.9 ko:K04765 ko00230,ko00240,ko00760,ko00770,ko01100,map00230,map00240,map00760,map00770,map01100 - R00086,R00087,R00103,R00287,R00426,R00515,R00662,R00720,R03004,R03036,R11323 RC00002 ko00000,ko00001,ko01000 - - - MazG QTD1_k127_802577_5 1121013.P873_07820 5.107e-96 319.0 COG0745@1|root,COG0745@2|Bacteria,1N0YI@1224|Proteobacteria,1RMWT@1236|Gammaproteobacteria,1X2XT@135614|Xanthomonadales 135614|Xanthomonadales KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain phoP - - ko:K07660 ko01503,ko02020,map01503,map02020 M00444,M00709,M00721,M00723,M00724,M00744 - - ko00000,ko00001,ko00002,ko01504,ko02022 - - - Response_reg,Trans_reg_C QTD1_k127_802577_6 765911.Thivi_4336 1.072e-81 288.0 COG0642@1|root,COG0642@2|Bacteria,1MX6R@1224|Proteobacteria,1T213@1236|Gammaproteobacteria,1X2PK@135613|Chromatiales 135613|Chromatiales T Histidine kinase - - 2.7.13.3 ko:K07637 ko01503,ko02020,map01503,map02020 M00444,M00709,M00721,M00723,M00724,M00744 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022 - - - HATPase_c QTD1_k127_802577_2 1500893.JQNB01000001_gene3490 5.194e-198 632.0 COG1012@1|root,COG1012@2|Bacteria,1MW72@1224|Proteobacteria,1RY9G@1236|Gammaproteobacteria,1X3B2@135614|Xanthomonadales 135614|Xanthomonadales C belongs to the aldehyde dehydrogenase family - - 1.2.1.3 ko:K00128 ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130 M00135 R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146 RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500 ko00000,ko00001,ko00002,ko01000 - - - Aldedh QTD1_k127_802577_10 1236959.BAMT01000002_gene2253 1.226e-07 54.0 COG1208@1|root,COG1208@2|Bacteria,1R9ZD@1224|Proteobacteria,2VJUN@28216|Betaproteobacteria,2KMGT@206350|Nitrosomonadales 206350|Nitrosomonadales JM PFAM Nucleotidyl transferase - - 2.7.7.99 ko:K00992 ko00520,ko01100,map00520,map01100 - R11025 RC00002 ko00000,ko00001,ko01000 - - - NTP_transferase QTD1_k127_803693_2 204669.Acid345_4397 2.575e-32 135.0 COG1595@1|root,COG1595@2|Bacteria,3Y5BF@57723|Acidobacteria,2JJZZ@204432|Acidobacteriia 204432|Acidobacteriia K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 QTD1_k127_803693_1 1049564.TevJSym_ao00490 1.63e-75 267.0 COG2199@1|root,COG3706@2|Bacteria,1R7HC@1224|Proteobacteria,1SZ82@1236|Gammaproteobacteria 1236|Gammaproteobacteria T Protein of unknown function, DUF484 - - - - - - - - - - - - DUF484,GGDEF QTD1_k127_803693_0 502025.Hoch_6599 7.553e-123 411.0 COG0287@1|root,COG1605@1|root,COG0287@2|Bacteria,COG1605@2|Bacteria,1QA4K@1224|Proteobacteria,42V3B@68525|delta/epsilon subdivisions,2WRIN@28221|Deltaproteobacteria,2YW0I@29|Myxococcales 28221|Deltaproteobacteria E Prephenate dehydrogenase chorismate mutase - - 1.3.1.12 ko:K00210 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 M00025 R01728 RC00125 ko00000,ko00001,ko00002,ko01000 - - - CM_2,PDH QTD1_k127_803693_3 1215092.PA6_036_00170 5.927e-12 78.0 2EDAW@1|root,33777@2|Bacteria,1NE47@1224|Proteobacteria,1SF3R@1236|Gammaproteobacteria,1YJCH@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria - - - - - - - - - - - - - - - QTD1_k127_80901_1 1234364.AMSF01000095_gene2542 3.148e-120 395.0 COG5000@1|root,COG5000@2|Bacteria,1MWKZ@1224|Proteobacteria,1RQ8B@1236|Gammaproteobacteria,1X41T@135614|Xanthomonadales 135614|Xanthomonadales T Histidine kinase styS - - - - - - - - - - - HATPase_c,PAS_8 QTD1_k127_80901_2 688245.CtCNB1_2757 1.344e-112 374.0 COG1210@1|root,COG1210@2|Bacteria,1MV5F@1224|Proteobacteria,2VH00@28216|Betaproteobacteria,4AGKC@80864|Comamonadaceae 28216|Betaproteobacteria M UTP-glucose-1-phosphate uridylyltransferase galU - 2.7.7.9 ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 M00129,M00361,M00362,M00549 R00289 RC00002 ko00000,ko00001,ko00002,ko01000 - - - NTP_transferase QTD1_k127_80901_3 187272.Mlg_0934 2.821e-43 175.0 COG2956@1|root,COG2956@2|Bacteria,1MVDP@1224|Proteobacteria,1RP29@1236|Gammaproteobacteria,1WWKI@135613|Chromatiales 135613|Chromatiales G Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane lapB - - ko:K19804 - - - - ko00000 - - - TPR_16,TPR_7 QTD1_k127_80901_4 545276.KB898726_gene1030 3.779e-37 155.0 COG0776@1|root,COG0776@2|Bacteria,1MZ7M@1224|Proteobacteria,1S8XZ@1236|Gammaproteobacteria,1WYM5@135613|Chromatiales 135613|Chromatiales K This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control himD - - ko:K05788 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding QTD1_k127_80901_0 519989.ECTPHS_08271 2.07e-143 459.0 COG0539@1|root,COG0539@2|Bacteria,1MVAV@1224|Proteobacteria,1RMFY@1236|Gammaproteobacteria,1WVVK@135613|Chromatiales 135613|Chromatiales J thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence rpsA - - ko:K02945 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - S1 QTD1_k127_817673_2 1384054.N790_01945 2.238e-55 201.0 COG2352@1|root,COG2352@2|Bacteria,1MUD5@1224|Proteobacteria,1RPTP@1236|Gammaproteobacteria,1X4MI@135614|Xanthomonadales 135614|Xanthomonadales C Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle ppc GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008964,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044444,GO:0044464 4.1.1.31 ko:K01595 ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200 M00168,M00170,M00171,M00172,M00173,M00346,M00374 R00345 RC02741 ko00000,ko00001,ko00002,ko01000 - - - PEPcase QTD1_k127_817673_3 395961.Cyan7425_5220 1.457e-47 173.0 COG0346@1|root,COG0346@2|Bacteria 2|Bacteria E lactoylglutathione lyase activity - - - - - - - - - - - - Glyoxalase QTD1_k127_817673_0 1335757.SPICUR_01275 3.153e-161 531.0 COG0475@1|root,COG0490@1|root,COG1226@1|root,COG0475@2|Bacteria,COG0490@2|Bacteria,COG1226@2|Bacteria,1MV34@1224|Proteobacteria,1RNVR@1236|Gammaproteobacteria,1WX9W@135613|Chromatiales 135613|Chromatiales P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family - - - ko:K03455 - - - - ko00000 2.A.37 - - Na_H_Exchanger,TrkA_C,TrkA_N QTD1_k127_817673_1 216594.MMAR_2375 6.046e-64 226.0 COG3467@1|root,COG3467@2|Bacteria,2GJ76@201174|Actinobacteria,232UM@1762|Mycobacteriaceae 201174|Actinobacteria S Pyridoxamine 5'-phosphate oxidase - - - ko:K07005 - - - - ko00000 - - - Pyridox_ox_2 QTD1_k127_861376_0 1123368.AUIS01000010_gene2375 3.718e-127 419.0 COG0008@1|root,COG0008@2|Bacteria,1MUCR@1224|Proteobacteria,1S14K@1236|Gammaproteobacteria,2NBXM@225057|Acidithiobacillales 225057|Acidithiobacillales J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) - - 6.1.1.17 ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 M00121,M00359,M00360 R05578 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 - - - tRNA-synt_1c QTD1_k127_861376_2 75379.Tint_0420 6.022e-51 188.0 COG0652@1|root,COG0652@2|Bacteria,1R9ZQ@1224|Proteobacteria,2VQ6F@28216|Betaproteobacteria,1KKPY@119065|unclassified Burkholderiales 28216|Betaproteobacteria M PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides ppiA - 5.2.1.8 ko:K03767,ko:K03768 ko01503,ko04217,map01503,map04217 - - - ko00000,ko00001,ko01000,ko03110,ko04147 - - - Pro_isomerase QTD1_k127_861376_1 1123073.KB899242_gene1498 5.92e-66 233.0 COG2908@1|root,COG2908@2|Bacteria,1N3U7@1224|Proteobacteria,1RP1X@1236|Gammaproteobacteria,1X5K2@135614|Xanthomonadales 135614|Xanthomonadales S Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell lpxH - 3.6.1.54 ko:K03269 ko00540,ko01100,map00540,map01100 M00060 R04549 RC00002 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Metallophos,Metallophos_2 QTD1_k127_871977_2 234267.Acid_4270 3.027e-191 607.0 COG4447@1|root,COG4447@2|Bacteria,3Y487@57723|Acidobacteria 57723|Acidobacteria S cellulose binding - - - - - - - - - - - - - QTD1_k127_871977_3 448385.sce2001 1.694e-42 165.0 COG1028@1|root,COG1028@2|Bacteria,1MUS7@1224|Proteobacteria,43AR8@68525|delta/epsilon subdivisions,2X658@28221|Deltaproteobacteria,2Z39A@29|Myxococcales 28221|Deltaproteobacteria IQ NAD dependent epimerase/dehydratase family - - - - - - - - - - - - adh_short,adh_short_C2 QTD1_k127_871977_0 1380394.JADL01000003_gene4754 2.333e-269 839.0 COG1283@1|root,COG1283@2|Bacteria,1MUDE@1224|Proteobacteria,2TRF9@28211|Alphaproteobacteria,2JQEV@204441|Rhodospirillales 204441|Rhodospirillales P Na+/Pi-cotransporter - - - ko:K03324 - - - - ko00000,ko02000 2.A.58.2 - - Na_Pi_cotrans,PhoU QTD1_k127_871977_1 685778.AORL01000021_gene926 9.437e-207 652.0 COG1228@1|root,COG1228@2|Bacteria,1MVAF@1224|Proteobacteria,2TTYC@28211|Alphaproteobacteria,2K0Q2@204457|Sphingomonadales 204457|Sphingomonadales Q COG1228 Imidazolonepropionase and related amidohydrolases - - - - - - - - - - - - Amidohydro_1 QTD1_k127_975989_3 1276756.AUEX01000001_gene960 2.573e-11 71.0 COG1807@1|root,COG1807@2|Bacteria,1NMIZ@1224|Proteobacteria,2VMHK@28216|Betaproteobacteria,4ACZ5@80864|Comamonadaceae 28216|Betaproteobacteria M PFAM glycosyl transferase family 39 arnT - - - - - - - - - - - PMT_2 QTD1_k127_975989_0 667632.KB890217_gene4864 9.858e-193 630.0 COG0578@1|root,COG0578@2|Bacteria,1MUMY@1224|Proteobacteria,2VN8I@28216|Betaproteobacteria,1K0XC@119060|Burkholderiaceae 28216|Betaproteobacteria C Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family glpD - 1.1.5.3 ko:K00111 ko00564,ko01110,map00564,map01110 - R00848 RC00029 ko00000,ko00001,ko01000 - - - DAO,DAO_C QTD1_k127_975989_1 477228.YO5_12112 3.973e-78 274.0 COG1560@1|root,COG1560@2|Bacteria,1MVNI@1224|Proteobacteria,1RMZ5@1236|Gammaproteobacteria,1Z03P@136846|Pseudomonas stutzeri group 1236|Gammaproteobacteria M Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)- (lauroyl)-lipid IV(A) lpxL GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006082,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0006950,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008951,GO:0009058,GO:0009245,GO:0009247,GO:0009266,GO:0009311,GO:0009312,GO:0009409,GO:0009628,GO:0009987,GO:0016020,GO:0016051,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0019752,GO:0036103,GO:0036104,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046467,GO:0046493,GO:0050896,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.241,2.3.1.242 ko:K02517,ko:K12974 ko00540,ko01100,map00540,map01100 M00060 R05146,R10906 RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01005 - - iEC042_1314.EC042_2597,iSF_1195.SF1061,iS_1188.S1138,iYL1228.KPN_01068 Lip_A_acyltrans QTD1_k127_975989_2 1121440.AUMA01000007_gene1178 1.429e-70 261.0 COG1129@1|root,COG1129@2|Bacteria,1QUMV@1224|Proteobacteria,42QC3@68525|delta/epsilon subdivisions,2WKCA@28221|Deltaproteobacteria,2M7UH@213115|Desulfovibrionales 28221|Deltaproteobacteria G PFAM ABC transporter related - - - ko:K05776 ko02010,map02010 M00189 - - ko00000,ko00001,ko00002,ko02000 - - - ABC_tran QTD1_k127_989575_1 1122604.JONR01000008_gene2252 4.878e-258 797.0 COG2010@1|root,COG2132@1|root,COG2010@2|Bacteria,COG2132@2|Bacteria,1MV74@1224|Proteobacteria,1RXZF@1236|Gammaproteobacteria,1X3IK@135614|Xanthomonadales 135614|Xanthomonadales CQ Multicopper oxidase - - 1.7.2.1 ko:K00368 ko00910,ko01120,map00910,map01120 M00529 R00783,R00785 RC00086 ko00000,ko00001,ko00002,ko01000 - - - Cu-oxidase,Cu-oxidase_3,Cytochrome_CBB3 QTD1_k127_989575_5 1122604.JONR01000008_gene2251 2.35e-89 301.0 COG1262@1|root,COG1262@2|Bacteria,1RAP4@1224|Proteobacteria,1RQ7C@1236|Gammaproteobacteria,1X5A7@135614|Xanthomonadales 135614|Xanthomonadales S Sulfatase-modifying factor enzyme 1 - - - - - - - - - - - - FGE-sulfatase QTD1_k127_989575_7 1123256.KB907931_gene2745 9.183e-49 191.0 COG1999@1|root,COG1999@2|Bacteria,1N5E3@1224|Proteobacteria,1SEFK@1236|Gammaproteobacteria,1X6YE@135614|Xanthomonadales 135614|Xanthomonadales S SCO1/SenC - - - ko:K07152 - - - - ko00000,ko03029 - - - SCO1-SenC QTD1_k127_989575_2 292.DM42_471 8.589e-219 687.0 COG1457@1|root,COG1457@2|Bacteria,1QYVS@1224|Proteobacteria,2VN4H@28216|Betaproteobacteria,1K1JN@119060|Burkholderiaceae 28216|Betaproteobacteria F Belongs to the purine-cytosine permease (2.A.39) family - - - ko:K03457 - - - - ko00000 2.A.39 - - Transp_cyt_pur QTD1_k127_989575_8 614083.AWQR01000030_gene2784 1.554e-37 143.0 COG1720@1|root,COG1720@2|Bacteria 2|Bacteria S tRNA m6t6A37 methyltransferase activity - - 1.2.7.12 ko:K11261 ko00680,ko01100,ko01120,ko01200,map00680,map01100,map01120,map01200 M00567 R03015,R08060,R11743 RC00197,RC00323 ko00000,ko00001,ko00002,ko01000 - - - FmdE,UPF0066 QTD1_k127_989575_6 887062.HGR_08419 8.197e-86 285.0 COG3558@1|root,COG3558@2|Bacteria,1RA64@1224|Proteobacteria,2VQAI@28216|Betaproteobacteria,4ADTV@80864|Comamonadaceae 28216|Betaproteobacteria S Protein of unknown function (DUF1348) - - - ko:K09958 - - - - ko00000 - - - DUF1348 QTD1_k127_989575_3 1122604.JONR01000080_gene2474 2.539e-171 550.0 COG0477@1|root,COG2814@2|Bacteria,1MWKH@1224|Proteobacteria,1RS23@1236|Gammaproteobacteria,1X5R5@135614|Xanthomonadales 135614|Xanthomonadales EGP Major facilitator superfamily - - - ko:K08178 - - - - ko00000,ko02000 2.A.1.12 - - MFS_1,Sugar_tr QTD1_k127_989575_4 1123487.KB892835_gene3313 3.016e-124 422.0 COG1404@1|root,COG1404@2|Bacteria,1MU3S@1224|Proteobacteria,2VIXC@28216|Betaproteobacteria,2M02Y@206389|Rhodocyclales 28216|Betaproteobacteria O Subtilase family - - - ko:K14645 ko02024,map02024 - - - ko00000,ko00001,ko01000,ko01002,ko03110 - - - Big_3_2,Big_3_3,Peptidase_S8 QTD1_k127_989575_10 1267533.KB906735_gene4449 1.4e-13 75.0 COG5492@1|root,COG5492@2|Bacteria,3Y97M@57723|Acidobacteria,2JMQ8@204432|Acidobacteriia 2|Bacteria N domain, Protein - - - - - - - - - - - - Big_2,CHU_C,PKD,SLH,SprB QTD1_k127_989575_9 457570.Nther_2188 2.731e-37 160.0 COG4805@1|root,COG4805@2|Bacteria 2|Bacteria S Bacterial protein of unknown function (DUF885) - - - - - - - - - - - - DUF885 QTD1_k127_989575_0 1500894.JQNN01000001_gene3001 1.482e-274 872.0 COG0308@1|root,COG0308@2|Bacteria,1MUCI@1224|Proteobacteria,2VI6S@28216|Betaproteobacteria 28216|Betaproteobacteria E PFAM peptidase M1, membrane alanine aminopeptidase - - 3.4.11.2 ko:K01256 ko00480,ko01100,map00480,map01100 - R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 - - - ERAP1_C,Peptidase_M1 ## 2721 queries scanned ## Total time (seconds): 6.949950695037842 ## Rate: 391.51 q/s