## Fri Nov 15 13:20:03 2024
## emapper-2.1.12
## /data/home/zkh/miniconda3/envs/eggnog-mapper/bin/emapper.py -i /data/home/zkh/binning/bin_4635/bin/bin23/SRD_3_bin.10.fa -m mmseqs --itype genome -o SRD_3_bin.10 --output_dir /data/home/zkh/meta_analysis/eggnog-mapper/4635/SRD_3_bin.10 --cpu 28
##
#query	seed_ortholog	evalue	score	eggNOG_OGs	max_annot_lvl	COG_category	Description	Preferred_name	GOs	EC	KEGG_ko	KEGG_Pathway	KEGG_Module	KEGG_Reaction	KEGG_rclass	BRITE	KEGG_TC	CAZy	BiGG_Reaction	PFAMs
SRD3_k127_1049113_2	1112212.JH584235_gene1301	5.574e-89	293.0	COG0193@1|root,COG0193@2|Bacteria,1MX1P@1224|Proteobacteria,2TT6Q@28211|Alphaproteobacteria,2K0UK@204457|Sphingomonadales	204457|Sphingomonadales	J	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis	pth	-	3.1.1.29	ko:K01056	-	-	-	-	ko00000,ko01000,ko03012	-	-	-	Pept_tRNA_hydro
SRD3_k127_1049113_1	1449076.JOOE01000001_gene2988	3.042e-93	311.0	COG1825@1|root,COG1825@2|Bacteria,1RDH0@1224|Proteobacteria,2U5P0@28211|Alphaproteobacteria,2K122@204457|Sphingomonadales	204457|Sphingomonadales	J	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance	ctc	-	-	ko:K02897	ko03010,map03010	M00178	-	-	ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L25p,Ribosomal_TL5_C
SRD3_k127_1049113_0	1379701.JPJC01000258_gene2697	3.791e-105	349.0	COG3735@1|root,COG3735@2|Bacteria,1MVCW@1224|Proteobacteria,2U5RA@28211|Alphaproteobacteria,2JZWN@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	ko:K09973	-	-	-	-	ko00000	-	-	-	TraB
SRD3_k127_1049113_3	745310.G432_07525	4.513e-40	164.0	COG3735@1|root,COG3735@2|Bacteria,1MVCW@1224|Proteobacteria,2U5RA@28211|Alphaproteobacteria,2JZWN@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	ko:K09973	-	-	-	-	ko00000	-	-	-	TraB
SRD3_k127_1049113_4	1449076.JOOE01000001_gene2984	5.85e-14	72.0	COG0752@1|root,COG0752@2|Bacteria,1MVCJ@1224|Proteobacteria,2TS2N@28211|Alphaproteobacteria,2K1RK@204457|Sphingomonadales	204457|Sphingomonadales	J	glycyl-tRNA synthetase alpha subunit	glyQ	-	6.1.1.14	ko:K01878	ko00970,map00970	M00360	R03654	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_2e
SRD3_k127_1059304_7	1112216.JH594425_gene2319	4.46e-79	271.0	COG2030@1|root,COG2030@2|Bacteria,1RHPH@1224|Proteobacteria,2U9GG@28211|Alphaproteobacteria,2K4IV@204457|Sphingomonadales	204457|Sphingomonadales	I	MaoC like domain	-	-	-	-	-	-	-	-	-	-	-	-	MaoC_dehydratas
SRD3_k127_1059304_5	1112212.JH584235_gene3503	5.381e-134	433.0	COG4714@1|root,COG4714@2|Bacteria,1N40I@1224|Proteobacteria,2U0QI@28211|Alphaproteobacteria,2K3S9@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF2167)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2167
SRD3_k127_1059304_3	1112216.JH594425_gene2322	1.253e-150	487.0	COG0668@1|root,COG0668@2|Bacteria,1MY0I@1224|Proteobacteria,2TSIN@28211|Alphaproteobacteria,2KCMP@204457|Sphingomonadales	204457|Sphingomonadales	M	Mechanosensitive ion channel	-	-	-	-	-	-	-	-	-	-	-	-	MS_channel
SRD3_k127_1059304_2	1112212.JH584235_gene3505	2.023e-167	531.0	COG3569@1|root,COG3569@2|Bacteria,1MVJ9@1224|Proteobacteria,2TUAH@28211|Alphaproteobacteria,2JZW2@204457|Sphingomonadales	204457|Sphingomonadales	L	DNA topoisomerase	-	-	5.99.1.2	ko:K03168	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	Topoisom_I
SRD3_k127_1059304_6	1112214.AHIS01000102_gene1588	1.411e-92	308.0	COG0693@1|root,COG0693@2|Bacteria,1MY0C@1224|Proteobacteria,2U5BS@28211|Alphaproteobacteria,2K4S9@204457|Sphingomonadales	204457|Sphingomonadales	S	DJ-1/PfpI family	-	-	3.5.1.124	ko:K05520	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	DJ-1_PfpI
SRD3_k127_1059304_4	1112216.JH594425_gene2325	5.688e-141	464.0	COG1835@1|root,COG1835@2|Bacteria,1N2Z2@1224|Proteobacteria,2U58X@28211|Alphaproteobacteria,2K1IY@204457|Sphingomonadales	204457|Sphingomonadales	I	Acyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
SRD3_k127_1059304_0	1112212.JH584235_gene3508	4.486e-235	734.0	COG3307@1|root,COG3307@2|Bacteria,1PX0E@1224|Proteobacteria,2TT7I@28211|Alphaproteobacteria,2JZV1@204457|Sphingomonadales	204457|Sphingomonadales	M	COG3307 Lipid A core - O-antigen ligase and related enzymes	-	-	-	-	-	-	-	-	-	-	-	-	Wzy_C
SRD3_k127_1059304_1	1112214.AHIS01000102_gene1584	3.199e-213	668.0	COG0438@1|root,COG0438@2|Bacteria,1PDR7@1224|Proteobacteria,2U1R4@28211|Alphaproteobacteria,2K0MZ@204457|Sphingomonadales	204457|Sphingomonadales	M	Glycosyl transferase	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_trans_4_4,Glycos_transf_1
SRD3_k127_1059304_8	1112212.JH584235_gene3511	3.651e-63	231.0	2AKVC@1|root,31BNI@2|Bacteria,1Q7HN@1224|Proteobacteria,2VDP0@28211|Alphaproteobacteria,2K5MM@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1059304_10	1449076.JOOE01000001_gene2914	2.412e-27	116.0	2BP1R@1|root,32HS9@2|Bacteria,1Q837@1224|Proteobacteria,2VE8Y@28211|Alphaproteobacteria,2K79B@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1059304_11	1112212.JH584235_gene3593	2.453e-18	87.0	2BMMB@1|root,32G6F@2|Bacteria,1NPK2@1224|Proteobacteria,2UKR9@28211|Alphaproteobacteria,2K7TJ@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1059304_9	1112212.JH584235_gene3594	1.031e-51	191.0	COG2932@1|root,COG2932@2|Bacteria,1N97M@1224|Proteobacteria,2UF88@28211|Alphaproteobacteria,2K4JZ@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S24
SRD3_k127_1109405_5	279238.Saro_1857	3.579e-11	66.0	COG0697@1|root,COG0697@2|Bacteria,1RAJV@1224|Proteobacteria,2U5BF@28211|Alphaproteobacteria,2K3YW@204457|Sphingomonadales	204457|Sphingomonadales	EG	COG0697 Permeases of the drug metabolite transporter (DMT) superfamily	-	-	-	-	-	-	-	-	-	-	-	-	EamA
SRD3_k127_1109405_1	426117.M446_2760	9.692e-88	312.0	COG2311@1|root,COG2311@2|Bacteria,1R8CP@1224|Proteobacteria,2TQPJ@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1109405_4	1445613.JALM01000021_gene4167	9.694e-17	92.0	COG2227@1|root,COG2227@2|Bacteria,2GNRH@201174|Actinobacteria,4DZFY@85010|Pseudonocardiales	201174|Actinobacteria	H	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_23
SRD3_k127_1109405_6	1082933.MEA186_12918	4.1e-09	66.0	2ESZ6@1|root,33KHF@2|Bacteria,1NQAZ@1224|Proteobacteria	1224|Proteobacteria	S	GtrA-like protein	-	-	-	-	-	-	-	-	-	-	-	-	GtrA
SRD3_k127_1109405_3	1287276.X752_06665	6.11e-71	251.0	COG1216@1|root,COG1216@2|Bacteria	2|Bacteria	V	Glycosyl transferase, family 2	-	-	2.4.1.60	ko:K07011,ko:K13005	-	-	-	-	ko00000,ko01000,ko01003,ko01005	-	-	-	Glycos_transf_2
SRD3_k127_1109405_2	1123248.KB893348_gene87	8.245e-75	271.0	COG3751@1|root,COG3751@2|Bacteria,4NJ06@976|Bacteroidetes	976|Bacteroidetes	O	2OG-Fe(II) oxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	2OG-FeII_Oxy_3
SRD3_k127_1109405_0	876269.ARWA01000001_gene2482	3.076e-131	431.0	COG0463@1|root,COG0463@2|Bacteria,1MXC1@1224|Proteobacteria,2TVY5@28211|Alphaproteobacteria	28211|Alphaproteobacteria	M	COG0463 Glycosyltransferases involved in cell wall biogenesis	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
SRD3_k127_1117174_1	1449076.JOOE01000001_gene2372	9.729e-228	709.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TREJ@28211|Alphaproteobacteria,2K1PX@204457|Sphingomonadales	204457|Sphingomonadales	I	Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA	-	-	1.3.8.4	ko:K00253	ko00280,ko01100,map00280,map01100	M00036	R04095	RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SRD3_k127_1117174_0	1112214.AHIS01000074_gene3226	3.974e-230	722.0	COG0531@1|root,COG0531@2|Bacteria,1MXNJ@1224|Proteobacteria,2TRNX@28211|Alphaproteobacteria,2K03C@204457|Sphingomonadales	204457|Sphingomonadales	E	amino acid	-	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease_2
SRD3_k127_1126158_3	1112216.JH594425_gene1489	1.02e-134	435.0	COG0209@1|root,COG0209@2|Bacteria,1MUJ8@1224|Proteobacteria,2TS19@28211|Alphaproteobacteria,2K0F8@204457|Sphingomonadales	204457|Sphingomonadales	F	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides	nrdA	-	1.17.4.1	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	M00053	R02017,R02018,R02019,R02024	RC00613	ko00000,ko00001,ko00002,ko01000,ko03400	-	-	-	Ribonuc_red_lgC,Ribonuc_red_lgN
SRD3_k127_1126158_2	1112212.JH584235_gene3310	8.731e-146	477.0	COG0642@1|root,COG0642@2|Bacteria,1R8E2@1224|Proteobacteria,2U4IJ@28211|Alphaproteobacteria,2K1WV@204457|Sphingomonadales	204457|Sphingomonadales	T	Histidine kinase-like ATPases	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c
SRD3_k127_1126158_4	1112212.JH584235_gene3311	7.983e-117	378.0	COG0745@1|root,COG0745@2|Bacteria,1R7B9@1224|Proteobacteria,2U300@28211|Alphaproteobacteria,2K0N4@204457|Sphingomonadales	204457|Sphingomonadales	T	Transcriptional regulatory protein, C terminal	-	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
SRD3_k127_1126158_8	1112212.JH584235_gene3312	3.773e-34	149.0	2FFRZ@1|root,347P5@2|Bacteria,1NF7E@1224|Proteobacteria,2UHES@28211|Alphaproteobacteria,2K4UY@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1126158_7	1211115.ALIQ01000237_gene2510	2.185e-70	243.0	COG1733@1|root,COG1733@2|Bacteria,1R6HM@1224|Proteobacteria,2U1TS@28211|Alphaproteobacteria,3NCD6@45404|Beijerinckiaceae	28211|Alphaproteobacteria	K	HxlR-like helix-turn-helix	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
SRD3_k127_1126158_5	1449076.JOOE01000003_gene3311	2.246e-101	334.0	COG0262@1|root,COG0262@2|Bacteria,1MU1W@1224|Proteobacteria,2U0RG@28211|Alphaproteobacteria,2K43R@204457|Sphingomonadales	204457|Sphingomonadales	H	RibD C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	RibD_C
SRD3_k127_1126158_6	640512.BC1003_0892	6.192e-91	303.0	COG0625@1|root,COG0625@2|Bacteria,1PENB@1224|Proteobacteria,2VNUW@28216|Betaproteobacteria,1K3Z4@119060|Burkholderiaceae	28216|Betaproteobacteria	O	Glutathione S-transferase	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_2,GST_N_3
SRD3_k127_1126158_0	1112216.JH594425_gene1493	0.0	1145.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,2K07A@204457|Sphingomonadales	204457|Sphingomonadales	T	signal transduction protein containing a membrane domain, an EAL and a GGDEF domain	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,PAS_4,PAS_9,PilZ
SRD3_k127_1126158_1	1379701.JPJC01000099_gene2565	9.08e-305	938.0	COG1838@1|root,COG1951@1|root,COG1838@2|Bacteria,COG1951@2|Bacteria,1MUV9@1224|Proteobacteria,2TT46@28211|Alphaproteobacteria,2K26A@204457|Sphingomonadales	204457|Sphingomonadales	C	Catalyzes the reversible hydration of fumarate to (S)- malate	-	-	4.2.1.2	ko:K01676	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00173,M00374	R01082	RC00443	ko00000,ko00001,ko00002,ko01000	-	-	-	Fumerase,Fumerase_C
SRD3_k127_1128551_12	1144307.PMI04_03083	1.757e-21	109.0	COG3209@1|root,COG3209@2|Bacteria,1MVV1@1224|Proteobacteria,2TTZD@28211|Alphaproteobacteria	28211|Alphaproteobacteria	M	RHS Repeat	-	-	-	-	-	-	-	-	-	-	-	-	RHS_repeat
SRD3_k127_1128551_9	190650.CC_2391	1.979e-33	135.0	COG1846@1|root,COG1846@2|Bacteria,1Q581@1224|Proteobacteria,2UGCH@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR_2
SRD3_k127_1128551_1	509190.Cseg_2367	1.543e-257	816.0	COG4773@1|root,COG4773@2|Bacteria,1QTXJ@1224|Proteobacteria,2U2G4@28211|Alphaproteobacteria,2KGAV@204458|Caulobacterales	204458|Caulobacterales	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SRD3_k127_1128551_7	1144319.PMI16_04355	1.109e-53	201.0	COG3675@1|root,COG3675@2|Bacteria,1ND8U@1224|Proteobacteria	1224|Proteobacteria	I	Lipase (class 3)	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_3
SRD3_k127_1128551_11	311403.Arad_1900	4.425e-27	112.0	COG3609@1|root,COG3609@2|Bacteria,1N9NJ@1224|Proteobacteria,2UG3J@28211|Alphaproteobacteria,4BG5A@82115|Rhizobiaceae	28211|Alphaproteobacteria	K	Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH	-	GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0042802,GO:0042803,GO:0043933,GO:0044085,GO:0046983,GO:0051259,GO:0051262,GO:0051290,GO:0051291,GO:0065003,GO:0071840	-	ko:K07746	-	-	-	-	ko00000,ko02048	-	-	-	ParD_antitoxin
SRD3_k127_1128551_10	1028801.RG1141_CH06690	1.378e-28	117.0	COG3668@1|root,COG3668@2|Bacteria,1N75M@1224|Proteobacteria,2UFHX@28211|Alphaproteobacteria,4BH3H@82115|Rhizobiaceae	28211|Alphaproteobacteria	S	ParE toxin of type II toxin-antitoxin system, parDE	parE1	GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0043933,GO:0044085,GO:0051259,GO:0051262,GO:0051290,GO:0051291,GO:0065003,GO:0071840	-	ko:K19092	-	-	-	-	ko00000,ko02048	-	-	-	ParE_toxin
SRD3_k127_1128551_2	1112214.AHIS01000046_gene2284	1.275e-182	575.0	COG0463@1|root,COG0463@2|Bacteria,1MWE5@1224|Proteobacteria,2TRRT@28211|Alphaproteobacteria,2K121@204457|Sphingomonadales	204457|Sphingomonadales	M	Glycosyl transferase family 2	-	-	-	ko:K20534	-	-	-	-	ko00000,ko01000,ko01005,ko02000	4.D.2.1.9	GT2	-	Glycos_transf_2
SRD3_k127_1128551_3	1219049.SP5_043_00990	1.663e-133	429.0	COG0500@1|root,COG0500@2|Bacteria,1QUSR@1224|Proteobacteria,2U78U@28211|Alphaproteobacteria,2K1PP@204457|Sphingomonadales	204457|Sphingomonadales	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_23
SRD3_k127_1128551_8	194867.ALBQ01000044_gene1526	3.236e-39	152.0	COG2246@1|root,COG2246@2|Bacteria,1N67P@1224|Proteobacteria,2UDG8@28211|Alphaproteobacteria,2KE35@204457|Sphingomonadales	204457|Sphingomonadales	S	GtrA-like protein	-	-	-	-	-	-	-	-	-	-	-	-	GtrA
SRD3_k127_1128551_0	1112212.JH584235_gene2070	4.658e-279	868.0	COG1287@1|root,COG1287@2|Bacteria,1RCIB@1224|Proteobacteria,2U677@28211|Alphaproteobacteria,2K1YU@204457|Sphingomonadales	204457|Sphingomonadales	S	oligosaccharyl transferase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1128551_5	1112216.JH594425_gene978	1.088e-91	310.0	COG2095@1|root,COG2095@2|Bacteria,1MX5T@1224|Proteobacteria,2U59A@28211|Alphaproteobacteria,2K0G8@204457|Sphingomonadales	204457|Sphingomonadales	U	UPF0056 membrane protein	-	-	-	ko:K05595	-	-	-	-	ko00000,ko02000	2.A.95.1	-	-	MarC
SRD3_k127_1128551_6	1449076.JOOE01000004_gene179	3.56e-62	219.0	2ANEF@1|root,31DD2@2|Bacteria,1RHST@1224|Proteobacteria,2UA6U@28211|Alphaproteobacteria,2K5G6@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1128551_4	1112214.AHIS01000046_gene2289	6.912e-132	424.0	COG0190@1|root,COG0190@2|Bacteria,1MWU4@1224|Proteobacteria,2TRZZ@28211|Alphaproteobacteria,2K03K@204457|Sphingomonadales	204457|Sphingomonadales	F	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate	folD	-	1.5.1.5,3.5.4.9	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	M00140,M00377	R01220,R01655	RC00202,RC00578	ko00000,ko00001,ko00002,ko01000	-	-	-	THF_DHG_CYH,THF_DHG_CYH_C
SRD3_k127_1153070_2	1101190.ARWB01000001_gene1339	1.786e-87	292.0	COG0531@1|root,COG0531@2|Bacteria,1MXNJ@1224|Proteobacteria,2TUN5@28211|Alphaproteobacteria	28211|Alphaproteobacteria	E	amino acid	-	-	-	ko:K03294,ko:K16238	-	-	-	-	ko00000,ko02000	2.A.3.2,2.A.3.5	-	-	AA_permease_2
SRD3_k127_1153070_0	1112212.JH584235_gene3657	2.615e-222	700.0	COG0260@1|root,COG0260@2|Bacteria,1MUIN@1224|Proteobacteria,2TSI6@28211|Alphaproteobacteria,2JZV7@204457|Sphingomonadales	204457|Sphingomonadales	E	Belongs to the peptidase M17 family	-	-	3.4.11.1	ko:K01255	ko00480,ko01100,map00480,map01100	-	R00899,R04951	RC00096,RC00141	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_M17
SRD3_k127_1153070_1	1112214.AHIS01000078_gene3466	8.759e-207	661.0	COG1680@1|root,COG1680@2|Bacteria,1R8N7@1224|Proteobacteria,2UCNR@28211|Alphaproteobacteria,2K0VY@204457|Sphingomonadales	204457|Sphingomonadales	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SRD3_k127_1153070_3	194867.ALBQ01000057_gene3427	1.447e-75	260.0	COG4993@1|root,COG4993@2|Bacteria,1MUQX@1224|Proteobacteria,2TQMV@28211|Alphaproteobacteria,2K0W1@204457|Sphingomonadales	204457|Sphingomonadales	G	Glucose dehydrogenase	-	-	1.1.5.2	ko:K00117	ko00030,ko01100,ko01110,ko01130,map00030,map01100,map01110,map01130	-	R06620	RC00066	ko00000,ko00001,ko01000	-	-	-	PQQ,PQQ_2
SRD3_k127_1163846_7	1346791.M529_13210	1.563e-36	139.0	2C3CF@1|root,32RRR@2|Bacteria,1MZUG@1224|Proteobacteria,2UC1Q@28211|Alphaproteobacteria,2K6GG@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF3175)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3175
SRD3_k127_1163846_12	990285.RGCCGE502_05679	6.047e-20	90.0	2E328@1|root,32Y2G@2|Bacteria,1PWUE@1224|Proteobacteria,2VEEU@28211|Alphaproteobacteria,4BKQN@82115|Rhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1163846_5	1112214.AHIS01000068_gene3192	2.798e-52	208.0	2BR2H@1|root,31B0W@2|Bacteria,1NY1D@1224|Proteobacteria,2USTP@28211|Alphaproteobacteria,2KDMK@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1163846_1	1112212.JH584235_gene3324	1.037e-197	631.0	COG0477@1|root,COG0477@2|Bacteria,1MVZG@1224|Proteobacteria,2TRS1@28211|Alphaproteobacteria,2K1Z1@204457|Sphingomonadales	204457|Sphingomonadales	EGP	Transporter	-	-	-	ko:K03761	-	-	-	-	ko00000,ko02000	2.A.1.6.2	-	-	Sugar_tr
SRD3_k127_1163846_11	449447.MAE_47260	5.479e-25	109.0	COG3636@1|root,COG3636@2|Bacteria,1G8C3@1117|Cyanobacteria	1117|Cyanobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	HTH_3
SRD3_k127_1163846_10	269799.Gmet_2533	6.286e-26	111.0	COG3657@1|root,COG3657@2|Bacteria,1N74C@1224|Proteobacteria,42V2I@68525|delta/epsilon subdivisions,2WRI9@28221|Deltaproteobacteria,43VGH@69541|Desulfuromonadales	28221|Deltaproteobacteria	S	TIGRFAM Addiction module killer protein	-	-	-	-	-	-	-	-	-	-	-	-	Gp49
SRD3_k127_1163846_0	1112212.JH584235_gene3320	0.0	1360.0	COG0556@1|root,COG0556@2|Bacteria,1MUFK@1224|Proteobacteria,2TQSP@28211|Alphaproteobacteria,2K0F9@204457|Sphingomonadales	204457|Sphingomonadales	L	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage	uvrB	-	-	ko:K03702	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	Helicase_C,ResIII,UVR,UvrB
SRD3_k127_1163846_13	1449076.JOOE01000002_gene1519	1.975e-05	55.0	2EHBD@1|root,33B38@2|Bacteria,1N20E@1224|Proteobacteria,2UDRX@28211|Alphaproteobacteria,2KDND@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF3617)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3617
SRD3_k127_1163846_4	1112212.JH584235_gene3317	9.413e-54	195.0	2AM2G@1|root,31BWI@2|Bacteria,1Q7UZ@1224|Proteobacteria,2VDZX@28211|Alphaproteobacteria,2K6HK@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1163846_9	1549858.MC45_07390	1.257e-27	114.0	COG1476@1|root,COG1476@2|Bacteria,1Q1N9@1224|Proteobacteria,2UHC9@28211|Alphaproteobacteria,2K7PU@204457|Sphingomonadales	204457|Sphingomonadales	K	Helix-turn-helix	-	-	-	-	-	-	-	-	-	-	-	-	HTH_3
SRD3_k127_1163846_8	1449076.JOOE01000003_gene3816	1.265e-31	130.0	2BPU0@1|root,32IME@2|Bacteria,1Q1VU@1224|Proteobacteria,2V9H6@28211|Alphaproteobacteria,2K6EH@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1163846_2	685778.AORL01000010_gene3066	2.6e-162	523.0	COG0477@1|root,COG0477@2|Bacteria,1MWXZ@1224|Proteobacteria,2TT27@28211|Alphaproteobacteria,2K3H0@204457|Sphingomonadales	204457|Sphingomonadales	EGP	TIGRFAM drug resistance transporter, EmrB QacA subfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,MFS_3
SRD3_k127_1163846_3	555793.WSK_1794	3.422e-67	232.0	COG1720@1|root,COG1720@2|Bacteria,1Q67Y@1224|Proteobacteria,2VCES@28211|Alphaproteobacteria,2KA5R@204457|Sphingomonadales	204457|Sphingomonadales	S	Uncharacterised protein family UPF0066	-	-	-	-	-	-	-	-	-	-	-	-	UPF0066
SRD3_k127_1163846_6	1112212.JH584235_gene3315	3.618e-47	171.0	COG2827@1|root,COG2827@2|Bacteria,1MZME@1224|Proteobacteria,2UCNX@28211|Alphaproteobacteria,2K66E@204457|Sphingomonadales	204457|Sphingomonadales	L	GIY-YIG catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	GIY-YIG
SRD3_k127_1164626_0	1123267.JONN01000001_gene1328	4.134e-178	565.0	COG1009@1|root,COG1009@2|Bacteria,1MW2M@1224|Proteobacteria,2TQSS@28211|Alphaproteobacteria,2K1DM@204457|Sphingomonadales	204457|Sphingomonadales	CP	NADH ubiquinone oxidoreductase subunit	nuoL	-	1.6.5.3	ko:K00341	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	NADH5_C,Proton_antipo_M,Proton_antipo_N
SRD3_k127_1164626_1	745310.G432_00225	2.406e-43	171.0	COG1008@1|root,COG1008@2|Bacteria,1MV7V@1224|Proteobacteria,2TSNK@28211|Alphaproteobacteria,2K0EQ@204457|Sphingomonadales	204457|Sphingomonadales	C	NADH ubiquinone oxidoreductase subunit	nuoM	-	1.6.5.3	ko:K00342	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q5_N,Proton_antipo_M
SRD3_k127_1172293_0	194867.ALBQ01000009_gene2337	0.0	1079.0	COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,1MU9K@1224|Proteobacteria,2TTJG@28211|Alphaproteobacteria,2JZUI@204457|Sphingomonadales	204457|Sphingomonadales	P	COG1629 Outer membrane receptor proteins, mostly Fe transport	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SRD3_k127_1172293_1	194867.ALBQ01000009_gene2338	1.254e-229	729.0	COG0457@1|root,COG0457@2|Bacteria,1MVMG@1224|Proteobacteria,2TSGE@28211|Alphaproteobacteria,2K26Q@204457|Sphingomonadales	204457|Sphingomonadales	S	Sulfotransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Sulfotransfer_3,TPR_1,TPR_16,TPR_19,TPR_8
SRD3_k127_1172293_3	1123267.JONN01000001_gene1983	2.14e-148	482.0	COG3555@1|root,COG3555@2|Bacteria,1MXZE@1224|Proteobacteria,2UQPG@28211|Alphaproteobacteria,2KD8E@204457|Sphingomonadales	204457|Sphingomonadales	O	Aspartyl/Asparaginyl beta-hydroxylase	-	-	-	-	-	-	-	-	-	-	-	-	Asp_Arg_Hydrox
SRD3_k127_1172293_2	392499.Swit_3142	1.013e-158	514.0	COG0457@1|root,COG0457@2|Bacteria,1RHFI@1224|Proteobacteria,2TXPR@28211|Alphaproteobacteria,2KEIN@204457|Sphingomonadales	204457|Sphingomonadales	S	Putative 2OG-Fe(II) oxygenase	-	-	-	-	-	-	-	-	-	-	-	-	2OG-FeII_Oxy_5
SRD3_k127_1172293_4	1379701.JPJC01000284_gene2738	2.866e-109	355.0	COG0542@1|root,COG0542@2|Bacteria,1MURH@1224|Proteobacteria,2TRKI@28211|Alphaproteobacteria,2K00X@204457|Sphingomonadales	204457|Sphingomonadales	O	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE	clpB	-	-	ko:K03695	ko04213,map04213	-	-	-	ko00000,ko00001,ko03110	-	-	-	AAA,AAA_2,ClpB_D2-small,Clp_N
SRD3_k127_1175873_5	1112212.JH584236_gene167	3.799e-72	255.0	COG0589@1|root,COG0589@2|Bacteria,1NS8K@1224|Proteobacteria,2UQUE@28211|Alphaproteobacteria,2KD5B@204457|Sphingomonadales	204457|Sphingomonadales	T	Universal stress protein family	-	-	-	-	-	-	-	-	-	-	-	-	Usp
SRD3_k127_1175873_0	1449076.JOOE01000001_gene2198	6.271e-200	638.0	COG1236@1|root,COG1236@2|Bacteria,1MUDD@1224|Proteobacteria,2TVFM@28211|Alphaproteobacteria,2K10T@204457|Sphingomonadales	204457|Sphingomonadales	J	Beta-Casp domain	-	-	-	ko:K07576	-	-	-	-	ko00000	-	-	-	Beta-Casp,Lactamase_B,Lactamase_B_2,RMMBL
SRD3_k127_1175873_1	1449076.JOOE01000001_gene2089	1.095e-153	491.0	COG1064@1|root,COG1064@2|Bacteria,1MUTT@1224|Proteobacteria,2TTI9@28211|Alphaproteobacteria,2K29S@204457|Sphingomonadales	204457|Sphingomonadales	S	Alcohol dehydrogenase GroES-like domain	-	-	1.1.1.1	ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	-	R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310	RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273	ko00000,ko00001,ko01000	-	-	-	ADH_N
SRD3_k127_1175873_10	1331060.RLDS_25720	3.365e-07	59.0	2ABG1@1|root,310X0@2|Bacteria,1PNYE@1224|Proteobacteria,2V1HN@28211|Alphaproteobacteria,2KBK6@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1175873_9	1331060.RLDS_08325	2.027e-18	92.0	COG3152@1|root,COG3152@2|Bacteria	2|Bacteria	L	Membrane	Z012_06975	-	-	-	-	-	-	-	-	-	-	-	DUF805
SRD3_k127_1175873_8	1101190.ARWB01000001_gene3309	2.603e-27	118.0	2C71V@1|root,2ZE8J@2|Bacteria,1P4PQ@1224|Proteobacteria,2UW91@28211|Alphaproteobacteria,37163@31993|Methylocystaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1175873_2	685778.AORL01000021_gene322	3.617e-112	370.0	COG0697@1|root,COG0697@2|Bacteria,1PHRI@1224|Proteobacteria,2TUAQ@28211|Alphaproteobacteria,2K69R@204457|Sphingomonadales	204457|Sphingomonadales	EG	of the drug metabolite transporter (DMT) superfamily	-	-	-	-	-	-	-	-	-	-	-	-	EamA
SRD3_k127_1175873_7	1122963.AUHB01000011_gene1347	1.101e-34	140.0	2CU97@1|root,32SUV@2|Bacteria,1N5QK@1224|Proteobacteria,2U96M@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1175873_3	1502850.FG91_01127	1.916e-103	351.0	COG2271@1|root,COG2271@2|Bacteria,1MVPS@1224|Proteobacteria,2UD2N@28211|Alphaproteobacteria,2KCXQ@204457|Sphingomonadales	204457|Sphingomonadales	G	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SRD3_k127_1175873_6	1379701.JPJC01000114_gene705	3.672e-53	196.0	COG3545@1|root,COG3545@2|Bacteria,1Q7JW@1224|Proteobacteria,2VDR4@28211|Alphaproteobacteria,2K5SZ@204457|Sphingomonadales	204457|Sphingomonadales	S	Serine hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Ser_hydrolase
SRD3_k127_1175873_4	622637.KE124771_gene132	4.236e-81	273.0	2C4JW@1|root,32RE4@2|Bacteria,1RHTV@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1202842_17	595536.ADVE02000001_gene84	7.914e-21	103.0	COG1132@1|root,COG1132@2|Bacteria,1MVJD@1224|Proteobacteria,2U2HD@28211|Alphaproteobacteria,3707M@31993|Methylocystaceae	28211|Alphaproteobacteria	V	ATPases associated with a variety of cellular activities	-	-	-	ko:K06148	-	-	-	-	ko00000,ko02000	3.A.1	-	-	ABC_membrane,ABC_tran
SRD3_k127_1202842_5	1112214.AHIS01000106_gene3995	4.455e-109	361.0	COG2301@1|root,COG2301@2|Bacteria,1MW0A@1224|Proteobacteria,2TTC0@28211|Alphaproteobacteria,2K2U8@204457|Sphingomonadales	204457|Sphingomonadales	G	Belongs to the HpcH HpaI aldolase family	-	-	4.1.3.34	ko:K01644	ko02020,map02020	-	R00362	RC00067,RC01118	ko00000,ko00001,ko01000	-	-	-	HpcH_HpaI
SRD3_k127_1202842_1	1379701.JPJC01000161_gene958	7.526e-197	622.0	COG1914@1|root,COG1914@2|Bacteria,1MW6X@1224|Proteobacteria,2TUTC@28211|Alphaproteobacteria,2K0EH@204457|Sphingomonadales	204457|Sphingomonadales	P	H( )-stimulated, divalent metal cation uptake system	mntH	-	-	ko:K03322	-	-	-	-	ko00000,ko02000	2.A.55.2.6,2.A.55.3	-	-	Nramp
SRD3_k127_1202842_12	1229172.JQFA01000004_gene1868	3.216e-51	198.0	COG1215@1|root,COG1215@2|Bacteria,1G12A@1117|Cyanobacteria,1H86I@1150|Oscillatoriales	1117|Cyanobacteria	M	glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
SRD3_k127_1202842_8	272123.Anacy_3669	7.14e-83	289.0	COG0438@1|root,COG0438@2|Bacteria,1G699@1117|Cyanobacteria,1HSFF@1161|Nostocales	1117|Cyanobacteria	M	SPTR Glycosyl transferase group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_1
SRD3_k127_1202842_2	1549858.MC45_12575	4.031e-175	552.0	COG1087@1|root,COG1087@2|Bacteria,1MUHI@1224|Proteobacteria,2TTC7@28211|Alphaproteobacteria,2K1G3@204457|Sphingomonadales	204457|Sphingomonadales	M	Belongs to the NAD(P)-dependent epimerase dehydratase family	galE	-	5.1.3.2	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00361,M00362,M00632	R00291,R02984	RC00289	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase
SRD3_k127_1202842_18	497965.Cyan7822_1657	1.59e-16	90.0	2E40H@1|root,32YXB@2|Bacteria,1GG4B@1117|Cyanobacteria,3KK33@43988|Cyanothece	1117|Cyanobacteria	S	Sulfotransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Sulfotransfer_3
SRD3_k127_1202842_16	395961.Cyan7425_0521	4.673e-22	107.0	COG0500@1|root,COG1404@1|root,COG1404@2|Bacteria,COG2226@2|Bacteria,1G2T7@1117|Cyanobacteria	1117|Cyanobacteria	O	Cyanobactin maturation protease, PatA PatG family	acyG	-	-	-	-	-	-	-	-	-	-	-	Nitroreductase,Peptidase_S8
SRD3_k127_1202842_9	1227739.Hsw_1587	1.11e-76	272.0	COG1134@1|root,COG1134@2|Bacteria,4NEDM@976|Bacteroidetes,47UTB@768503|Cytophagia	976|Bacteroidetes	GM	ATPases associated with a variety of cellular activities	-	-	-	ko:K09691	ko02010,map02010	M00250	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.103	-	-	ABC_tran
SRD3_k127_1202842_13	1227739.Hsw_1588	6.51e-44	171.0	COG1682@1|root,COG1682@2|Bacteria,4NF36@976|Bacteroidetes,47VU1@768503|Cytophagia	976|Bacteroidetes	GM	ABC-2 type transporter	-	-	-	ko:K09690	ko02010,map02010	M00250	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.103	-	-	ABC2_membrane
SRD3_k127_1202842_11	1227739.Hsw_1589	2.843e-54	203.0	COG0382@1|root,COG0382@2|Bacteria,4NNGX@976|Bacteroidetes	976|Bacteroidetes	H	UbiA prenyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	UbiA
SRD3_k127_1202842_3	1112212.JH584235_gene1581	4.52e-163	516.0	COG0005@1|root,COG0005@2|Bacteria,1MUWW@1224|Proteobacteria,2TSN3@28211|Alphaproteobacteria,2JZYP@204457|Sphingomonadales	204457|Sphingomonadales	F	Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates	mtnP	-	2.4.2.28	ko:K00772	ko00270,ko01100,map00270,map01100	M00034	R01402	RC00063,RC02819	ko00000,ko00001,ko00002,ko01000	-	-	-	PNP_UDP_1
SRD3_k127_1202842_14	1207055.C100_05110	1.019e-34	138.0	COG4731@1|root,COG4731@2|Bacteria,1RJE2@1224|Proteobacteria,2UA7R@28211|Alphaproteobacteria,2KD8H@204457|Sphingomonadales	204457|Sphingomonadales	S	Uncharacterized protein conserved in bacteria (DUF2147)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2147
SRD3_k127_1202842_15	1144305.PMI02_04711	3.878e-33	131.0	2AIP6@1|root,3195R@2|Bacteria,1NXH9@1224|Proteobacteria,2USYN@28211|Alphaproteobacteria,2K62G@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1202842_6	1112214.AHIS01000105_gene4050	5.43e-108	352.0	COG0122@1|root,COG0122@2|Bacteria,1MX9C@1224|Proteobacteria,2TVJ7@28211|Alphaproteobacteria,2K0I0@204457|Sphingomonadales	204457|Sphingomonadales	L	COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase	-	-	3.2.2.21	ko:K01247	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	HhH-GPD
SRD3_k127_1202842_10	1112212.JH584235_gene1578	9.168e-56	195.0	COG0633@1|root,COG0633@2|Bacteria,1N261@1224|Proteobacteria,2UC7B@28211|Alphaproteobacteria,2K5DE@204457|Sphingomonadales	204457|Sphingomonadales	C	ferredoxin	-	-	-	ko:K04755	-	-	-	-	ko00000	-	-	-	Fer2
SRD3_k127_1202842_7	1112212.JH584235_gene1577	1.114e-88	299.0	2D5TK@1|root,32TJS@2|Bacteria,1RGDJ@1224|Proteobacteria,2U915@28211|Alphaproteobacteria,2K4I8@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1202842_4	1112212.JH584235_gene1576	2.054e-142	453.0	COG0566@1|root,COG0566@2|Bacteria,1MWCM@1224|Proteobacteria,2TUG7@28211|Alphaproteobacteria,2K163@204457|Sphingomonadales	204457|Sphingomonadales	J	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family	-	-	2.1.1.185	ko:K03218	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	SpoU_methylase,SpoU_sub_bind
SRD3_k127_1202842_0	1112212.JH584235_gene1575	3.466e-297	917.0	COG2234@1|root,COG2234@2|Bacteria,1MWQ0@1224|Proteobacteria,2U1HX@28211|Alphaproteobacteria,2JZUX@204457|Sphingomonadales	204457|Sphingomonadales	S	Peptidase family M28	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M28
SRD3_k127_1210539_6	1449076.JOOE01000003_gene3306	6.14e-43	160.0	COG0009@1|root,COG0009@2|Bacteria,1MVPM@1224|Proteobacteria,2TRIM@28211|Alphaproteobacteria,2K1JS@204457|Sphingomonadales	204457|Sphingomonadales	J	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine	-	-	2.7.7.87	ko:K07566	-	-	R10463	RC00745	ko00000,ko01000,ko03009,ko03016	-	-	-	SUA5,Sua5_yciO_yrdC
SRD3_k127_1210539_1	1112212.JH584235_gene2664	1.632e-99	341.0	COG0225@1|root,COG0225@2|Bacteria,1NC84@1224|Proteobacteria,2TTDD@28211|Alphaproteobacteria,2KCQH@204457|Sphingomonadales	204457|Sphingomonadales	O	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine	-	-	-	-	-	-	-	-	-	-	-	-	PMSR
SRD3_k127_1210539_4	1112214.AHIS01000047_gene2182	4.014e-72	261.0	COG0671@1|root,COG0671@2|Bacteria,1RDK3@1224|Proteobacteria,2U7BJ@28211|Alphaproteobacteria,2K70Y@204457|Sphingomonadales	204457|Sphingomonadales	I	Acid phosphatase homologues	-	-	3.6.1.27	ko:K19302	ko00550,map00550	-	R05627	RC00002	ko00000,ko00001,ko01000,ko01011	-	-	-	PAP2
SRD3_k127_1210539_3	1122970.AUHC01000010_gene1568	4.271e-86	299.0	COG1680@1|root,COG1680@2|Bacteria,1MY4Y@1224|Proteobacteria,2TYCG@28211|Alphaproteobacteria,2K2G5@204457|Sphingomonadales	204457|Sphingomonadales	V	COG1680 Beta-lactamase class C and other penicillin binding proteins	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SRD3_k127_1210539_10	1120705.FG95_02674	2.888e-23	105.0	28TH0@1|root,2ZFQX@2|Bacteria,1NAIB@1224|Proteobacteria,2UI91@28211|Alphaproteobacteria,2K6T3@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1210539_0	1112212.JH584235_gene1855	3.188e-203	639.0	COG0482@1|root,COG0482@2|Bacteria,1MUT1@1224|Proteobacteria,2TQU7@28211|Alphaproteobacteria,2K1HV@204457|Sphingomonadales	204457|Sphingomonadales	J	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34	mnmA	-	2.8.1.13	ko:K00566	ko04122,map04122	-	R08700	RC02313,RC02315	ko00000,ko00001,ko01000,ko03016	-	-	-	tRNA_Me_trans
SRD3_k127_1210539_11	1112212.JH584235_gene1856	4.899e-19	93.0	2AJV6@1|root,31AHW@2|Bacteria,1Q5P6@1224|Proteobacteria,2VC09@28211|Alphaproteobacteria,2K71U@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1210539_5	1219049.SP5_017_00140	8.592e-58	201.0	2AMHV@1|root,31CDG@2|Bacteria,1RGVA@1224|Proteobacteria,2U98Q@28211|Alphaproteobacteria,2K54G@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF1153)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1153
SRD3_k127_1210539_7	1112212.JH584235_gene1858	5.406e-38	147.0	COG2261@1|root,COG2261@2|Bacteria,1N8B3@1224|Proteobacteria,2UKNY@28211|Alphaproteobacteria,2K64H@204457|Sphingomonadales	204457|Sphingomonadales	S	Transglycosylase associated protein	-	-	-	-	-	-	-	-	-	-	-	-	Transgly_assoc
SRD3_k127_1210539_2	1112216.JH594425_gene163	6.126e-90	303.0	COG2968@1|root,COG2968@2|Bacteria,1RH7T@1224|Proteobacteria,2U981@28211|Alphaproteobacteria,2K40S@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF541)	-	-	-	ko:K09807	-	-	-	-	ko00000	-	-	-	SIMPL
SRD3_k127_1210539_9	1449076.JOOE01000003_gene3829	5.003e-30	124.0	COG2261@1|root,COG2261@2|Bacteria,1PTXN@1224|Proteobacteria,2V0B8@28211|Alphaproteobacteria,2K7E3@204457|Sphingomonadales	204457|Sphingomonadales	S	Transglycosylase associated protein	-	-	-	-	-	-	-	-	-	-	-	-	Transgly_assoc
SRD3_k127_1210539_8	1112212.JH584235_gene1861	1.483e-31	127.0	COG0845@1|root,COG0845@2|Bacteria,1MXGH@1224|Proteobacteria,2U18A@28211|Alphaproteobacteria,2K0EM@204457|Sphingomonadales	204457|Sphingomonadales	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	-	-	-	-	-	-	-	-	-	HlyD_D23
SRD3_k127_1227642_10	666681.M301_0012	1.27e-14	89.0	COG2931@1|root,COG2931@2|Bacteria,1MU7T@1224|Proteobacteria,2VHFJ@28216|Betaproteobacteria,2KMBV@206350|Nitrosomonadales	206350|Nitrosomonadales	Q	Hemolysin-type calcium-binding region	-	-	-	-	-	-	-	-	-	-	-	-	HCBP_related,HemolysinCabind
SRD3_k127_1227642_5	760192.Halhy_1831	5.147e-185	630.0	COG2834@1|root,COG5384@1|root,COG2834@2|Bacteria,COG5384@2|Bacteria,4PKHZ@976|Bacteroidetes,1J0WV@117747|Sphingobacteriia	976|Bacteroidetes	J	InterPro IPR003367	-	-	-	-	-	-	-	-	-	-	-	-	CHU_C,TSP_3
SRD3_k127_1227642_8	317619.ANKN01000230_gene252	5.303e-66	259.0	COG0739@1|root,COG0823@1|root,COG1520@1|root,COG2931@1|root,COG3386@1|root,COG0739@2|Bacteria,COG0823@2|Bacteria,COG1520@2|Bacteria,COG2931@2|Bacteria,COG3386@2|Bacteria,1GJ06@1117|Cyanobacteria,1MN0C@1212|Prochloraceae	1117|Cyanobacteria	Q	Alternative locus ID	-	-	-	-	-	-	-	-	-	-	-	-	Cadherin,DUF4214
SRD3_k127_1227642_1	1112212.JH584235_gene1017	2.013e-304	944.0	COG0323@1|root,COG0323@2|Bacteria,1MV61@1224|Proteobacteria,2TR2M@28211|Alphaproteobacteria,2K2AP@204457|Sphingomonadales	204457|Sphingomonadales	L	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex	mutL	-	-	ko:K03572	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	DNA_mis_repair,HATPase_c_3,MutL_C
SRD3_k127_1227642_3	1112212.JH584235_gene1018	1.491e-209	653.0	COG1077@1|root,COG1077@2|Bacteria,1MUMW@1224|Proteobacteria,2TTQ2@28211|Alphaproteobacteria,2K10A@204457|Sphingomonadales	204457|Sphingomonadales	D	rod shape-determining protein MreB	mreB	-	-	ko:K03569	-	-	-	-	ko00000,ko02048,ko03036,ko04812	1.A.33.1,9.B.157.1	-	-	MreB_Mbl
SRD3_k127_1227642_6	1112212.JH584235_gene1019	2.301e-129	419.0	COG1792@1|root,COG1792@2|Bacteria,1N8ZS@1224|Proteobacteria,2U1FY@28211|Alphaproteobacteria,2K18A@204457|Sphingomonadales	204457|Sphingomonadales	M	Involved in formation and maintenance of cell shape	mreC	-	-	ko:K03570	-	-	-	-	ko00000,ko03036	9.B.157.1	-	-	MreC
SRD3_k127_1227642_7	1112212.JH584235_gene1020	1.324e-67	245.0	2923J@1|root,2ZPNK@2|Bacteria,1NHX1@1224|Proteobacteria,2UC0M@28211|Alphaproteobacteria,2K5BN@204457|Sphingomonadales	204457|Sphingomonadales	S	rod shape-determining protein MreD	-	-	-	ko:K03571	-	-	-	-	ko00000,ko03036	9.B.157.1	-	-	MreD
SRD3_k127_1227642_0	1112212.JH584235_gene1021	0.0	1075.0	COG0768@1|root,COG0768@2|Bacteria,1MV8C@1224|Proteobacteria,2TRXN@28211|Alphaproteobacteria,2JZYI@204457|Sphingomonadales	204457|Sphingomonadales	M	Penicillin-binding Protein	mrdA	-	3.4.16.4	ko:K05515	ko00550,ko01501,map00550,map01501	-	-	-	ko00000,ko00001,ko01000,ko01011	-	-	-	PBP_dimer,Transpeptidase
SRD3_k127_1227642_4	1112216.JH594425_gene2936	1.941e-188	593.0	COG0772@1|root,COG0772@2|Bacteria,1MUK3@1224|Proteobacteria,2TSM0@28211|Alphaproteobacteria,2K0FR@204457|Sphingomonadales	204457|Sphingomonadales	M	Peptidoglycan polymerase that is essential for cell wall elongation	mrdB	-	-	ko:K05837	-	-	-	-	ko00000,ko03036	-	-	-	FTSW_RODA_SPOVE
SRD3_k127_1227642_2	1112214.AHIS01000114_gene3725	8.713e-246	768.0	COG2723@1|root,COG2723@2|Bacteria,1MWG6@1224|Proteobacteria,2TSRN@28211|Alphaproteobacteria,2K348@204457|Sphingomonadales	204457|Sphingomonadales	G	beta-glucosidase	-	-	3.2.1.21	ko:K05350	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	-	-	Glyco_hydro_1
SRD3_k127_1227642_9	1449076.JOOE01000005_gene1629	9.399e-61	211.0	COG1501@1|root,COG1501@2|Bacteria,1MWNJ@1224|Proteobacteria,2U1U0@28211|Alphaproteobacteria,2K146@204457|Sphingomonadales	204457|Sphingomonadales	G	Belongs to the glycosyl hydrolase 31 family	-	-	3.2.1.177	ko:K01811	-	-	-	-	ko00000,ko01000	-	GH31	-	DUF5110,Gal_mutarotas_2,Glyco_hydro_31
SRD3_k127_1233051_1	1112214.AHIS01000049_gene2347	2.422e-78	266.0	COG0038@1|root,COG0038@2|Bacteria,1MV4K@1224|Proteobacteria,2TTBG@28211|Alphaproteobacteria,2K15J@204457|Sphingomonadales	204457|Sphingomonadales	P	Chloride channel	-	-	-	ko:K03281	-	-	-	-	ko00000	2.A.49	-	-	CBS,Voltage_CLC
SRD3_k127_1233051_0	1081640.AGFU01000045_gene614	8.24e-212	669.0	COG0154@1|root,COG0154@2|Bacteria,1MUVQ@1224|Proteobacteria,2TV11@28211|Alphaproteobacteria,2K0M0@204457|Sphingomonadales	204457|Sphingomonadales	J	Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit	-	-	3.5.1.4	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	-	R02540,R03096,R03180,R03909,R05551,R05590	RC00010,RC00100,RC00950,RC01025	ko00000,ko00001,ko01000	-	-	-	Amidase
SRD3_k127_1265143_0	1112214.AHIS01000078_gene3457	0.0	2309.0	COG0067@1|root,COG0069@1|root,COG0070@1|root,COG0067@2|Bacteria,COG0069@2|Bacteria,COG0070@2|Bacteria,1MU7B@1224|Proteobacteria,2TRHQ@28211|Alphaproteobacteria,2K19P@204457|Sphingomonadales	204457|Sphingomonadales	E	Glutamate synthase	gltB	-	1.4.1.13,1.4.1.14	ko:K00265	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	-	R00093,R00114,R00248	RC00006,RC00010,RC02799	ko00000,ko00001,ko01000	-	-	-	GATase_2,GXGXG,Glu_syn_central,Glu_synthase
SRD3_k127_1265143_5	1112216.JH594425_gene472	5.459e-130	416.0	COG0625@1|root,COG0625@2|Bacteria,1MXM4@1224|Proteobacteria,2TTXD@28211|Alphaproteobacteria,2K1DG@204457|Sphingomonadales	204457|Sphingomonadales	O	Glutathione S-transferase	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_2,GST_N_3
SRD3_k127_1265143_6	1449076.JOOE01000004_gene69	1.126e-58	205.0	COG0073@1|root,COG0073@2|Bacteria,1RGU7@1224|Proteobacteria,2U9AH@28211|Alphaproteobacteria,2K52N@204457|Sphingomonadales	204457|Sphingomonadales	J	Putative tRNA binding domain	csaA	-	-	ko:K06878	-	-	-	-	ko00000	-	-	-	tRNA_bind
SRD3_k127_1265143_14	1120705.FG95_01806	3.329e-11	65.0	2A6NX@1|root,30VGS@2|Bacteria,1P46A@1224|Proteobacteria,2UWUH@28211|Alphaproteobacteria,2K8CQ@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1265143_12	1187851.A33M_1345	2.713e-16	88.0	COG2442@1|root,COG2442@2|Bacteria,1REK1@1224|Proteobacteria,2UAYD@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1265143_9	1346791.M529_12600	3.731e-41	154.0	COG3677@1|root,COG3677@2|Bacteria,1MXYX@1224|Proteobacteria,2TQR3@28211|Alphaproteobacteria	28211|Alphaproteobacteria	L	Transposase and inactivated derivatives	-	-	-	-	-	-	-	-	-	-	-	-	DDE_Tnp_IS1595,Zn_Tnp_IS1595
SRD3_k127_1265143_7	46429.BV95_02140	2.173e-44	169.0	COG3677@1|root,COG3677@2|Bacteria,1MXYX@1224|Proteobacteria,2TQR3@28211|Alphaproteobacteria,2K2UC@204457|Sphingomonadales	204457|Sphingomonadales	L	ISXO2-like transposase domain	-	-	-	-	-	-	-	-	-	-	-	-	DDE_Tnp_IS1595,Zn_Tnp_IS1595
SRD3_k127_1265143_8	1346791.M529_02705	1.298e-43	164.0	2EMWB@1|root,33FIJ@2|Bacteria,1R3GB@1224|Proteobacteria,2U02P@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Domain of unknown function (DUF202)	-	-	-	ko:K00389	-	-	-	-	ko00000	-	-	-	DUF202
SRD3_k127_1265143_1	1112212.JH584235_gene2592	0.0	1424.0	COG0308@1|root,COG0308@2|Bacteria,1MUCI@1224|Proteobacteria,2TRUM@28211|Alphaproteobacteria,2K072@204457|Sphingomonadales	204457|Sphingomonadales	E	aminopeptidase N	pepN	-	3.4.11.2	ko:K01256	ko00480,ko01100,map00480,map01100	-	R00899,R04951	RC00096,RC00141	ko00000,ko00001,ko01000,ko01002	-	-	-	DUF3458,DUF3458_C,Peptidase_M1
SRD3_k127_1265143_2	1112214.AHIS01000047_gene2118	2.381e-251	787.0	COG2234@1|root,COG2234@2|Bacteria,1MVYE@1224|Proteobacteria,2VF5N@28211|Alphaproteobacteria,2KDVY@204457|Sphingomonadales	204457|Sphingomonadales	V	Peptidase family M28	-	-	-	-	-	-	-	-	-	-	-	-	PA,Peptidase_M28
SRD3_k127_1265143_10	164328.Phyra53628	7.204e-26	121.0	COG1088@1|root,KOG0747@2759|Eukaryota,3Q842@4776|Peronosporales	4776|Peronosporales	G	dTDP-glucose 4,6-dehydratase activity	-	-	-	-	-	-	-	-	-	-	-	-	CbiX
SRD3_k127_1265143_4	1112212.JH584235_gene2595	2.698e-132	428.0	COG0697@1|root,COG0697@2|Bacteria,1MXJY@1224|Proteobacteria,2TVBG@28211|Alphaproteobacteria,2K0J7@204457|Sphingomonadales	204457|Sphingomonadales	EG	Permeases of the drug metabolite transporter (DMT) superfamily	-	-	-	-	-	-	-	-	-	-	-	-	EamA
SRD3_k127_1265143_3	1112212.JH584235_gene2596	9.99e-191	599.0	COG2008@1|root,COG2008@2|Bacteria,1MWCR@1224|Proteobacteria,2TSUA@28211|Alphaproteobacteria,2K0EJ@204457|Sphingomonadales	204457|Sphingomonadales	E	Threonine aldolase	ltaA	-	4.1.2.48	ko:K01620	ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230	-	R00751,R06171	RC00312,RC00372	ko00000,ko00001,ko01000	-	-	-	Beta_elim_lyase
SRD3_k127_1265143_13	1379701.JPJC01000257_gene1484	4.74e-14	75.0	COG0744@1|root,COG0744@2|Bacteria,1QTST@1224|Proteobacteria,2TQQ8@28211|Alphaproteobacteria,2K0XK@204457|Sphingomonadales	204457|Sphingomonadales	M	Penicillin-binding Protein	-	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly,Transpeptidase
SRD3_k127_1269127_1	1112216.JH594425_gene2071	2.397e-183	576.0	COG1472@1|root,COG1472@2|Bacteria,1MVAJ@1224|Proteobacteria,2TRJK@28211|Alphaproteobacteria,2JZUV@204457|Sphingomonadales	204457|Sphingomonadales	G	beta-N-acetylhexosaminidase	nagZ	-	3.2.1.52	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	M00628	R00022,R05963,R07809,R07810,R10831	RC00049	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyco_hydro_3
SRD3_k127_1269127_2	1112216.JH594425_gene2072	1.29e-124	402.0	COG1354@1|root,COG1354@2|Bacteria,1MVCN@1224|Proteobacteria,2TS1V@28211|Alphaproteobacteria,2K15W@204457|Sphingomonadales	204457|Sphingomonadales	D	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves	scpA	-	-	ko:K05896	-	-	-	-	ko00000,ko03036	-	-	-	SMC_ScpA
SRD3_k127_1269127_4	1112214.AHIS01000031_gene1114	1.701e-93	311.0	COG1386@1|root,COG1386@2|Bacteria,1PUA6@1224|Proteobacteria,2TU64@28211|Alphaproteobacteria,2K231@204457|Sphingomonadales	204457|Sphingomonadales	D	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves	scpB	-	-	ko:K06024	-	-	-	-	ko00000,ko03036	-	-	-	SMC_ScpB
SRD3_k127_1269127_6	1112216.JH594425_gene2074	2.276e-27	112.0	COG1826@1|root,COG1826@2|Bacteria	2|Bacteria	U	protein secretion	tatA	-	-	ko:K03116	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	MttA_Hcf106
SRD3_k127_1269127_5	1379701.JPJC01000034_gene1832	1.492e-37	145.0	COG1826@1|root,COG1826@2|Bacteria,1N73F@1224|Proteobacteria,2UF4Z@28211|Alphaproteobacteria,2K60Q@204457|Sphingomonadales	204457|Sphingomonadales	U	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation	tatB	-	-	ko:K03117	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	MttA_Hcf106
SRD3_k127_1269127_3	1549858.MC45_09145	4.147e-117	381.0	COG0805@1|root,COG0805@2|Bacteria,1MVAY@1224|Proteobacteria,2TTIX@28211|Alphaproteobacteria,2K1PD@204457|Sphingomonadales	204457|Sphingomonadales	U	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides	tatC	-	-	ko:K03118	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	TatC
SRD3_k127_1269127_8	1007104.SUS17_2287	6.371e-12	69.0	2DFC4@1|root,2ZR9S@2|Bacteria,1Q4M0@1224|Proteobacteria,2UNE4@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Entericidin EcnA/B family	-	-	-	-	-	-	-	-	-	-	-	-	Entericidin
SRD3_k127_1269127_0	1112212.JH584235_gene1384	1.123e-218	690.0	COG3920@1|root,COG3920@2|Bacteria,1MVPJ@1224|Proteobacteria,2TSSQ@28211|Alphaproteobacteria,2K1HG@204457|Sphingomonadales	204457|Sphingomonadales	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HisKA_2
SRD3_k127_1269127_9	1090320.KB900605_gene1894	6.353e-09	64.0	2BIE1@1|root,32CKC@2|Bacteria,1Q8A2@1224|Proteobacteria,2VEG3@28211|Alphaproteobacteria,2K7TD@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1269127_7	1379701.JPJC01000034_gene1827	1.07e-25	108.0	COG0784@1|root,COG1595@1|root,COG0784@2|Bacteria,COG1595@2|Bacteria,1MX3Y@1224|Proteobacteria,2TT2R@28211|Alphaproteobacteria,2K0S1@204457|Sphingomonadales	204457|Sphingomonadales	T	In Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Sigma70_r4_2
SRD3_k127_1294149_0	1379701.JPJC01000206_gene1644	1.493e-179	578.0	COG2982@1|root,COG2982@2|Bacteria,1MUAN@1224|Proteobacteria,2U4Y3@28211|Alphaproteobacteria,2JZWM@204457|Sphingomonadales	204457|Sphingomonadales	M	AsmA-like C-terminal region	-	-	-	ko:K07290	-	-	-	-	ko00000	9.B.121	-	-	AsmA,AsmA_2
SRD3_k127_1311374_5	1007104.SUS17_2062	5.132e-30	120.0	COG0739@1|root,COG0739@2|Bacteria,1MVTF@1224|Proteobacteria,2TT3Z@28211|Alphaproteobacteria,2K2A0@204457|Sphingomonadales	204457|Sphingomonadales	M	membrane	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
SRD3_k127_1311374_2	1112216.JH594425_gene928	5.9e-296	914.0	COG0433@1|root,COG0433@2|Bacteria,1MUSH@1224|Proteobacteria,2TUN9@28211|Alphaproteobacteria,2K091@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function DUF87	-	-	-	ko:K06915	-	-	-	-	ko00000	-	-	-	DUF853,DUF87
SRD3_k127_1311374_6	366602.Caul_3782	4.059e-17	87.0	2EUEA@1|root,33MWN@2|Bacteria,1NYM7@1224|Proteobacteria,2UT87@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1311374_4	1112214.AHIS01000047_gene2020	2.486e-128	432.0	2AFUA@1|root,315WQ@2|Bacteria,1NHGB@1224|Proteobacteria,2TQWW@28211|Alphaproteobacteria,2JZXR@204457|Sphingomonadales	204457|Sphingomonadales	S	Putative transmembrane protein (Alph_Pro_TM)	-	-	-	-	-	-	-	-	-	-	-	-	Alph_Pro_TM
SRD3_k127_1311374_3	1112212.JH584235_gene2182	2.135e-153	491.0	COG0730@1|root,COG0730@2|Bacteria,1MWX2@1224|Proteobacteria,2TRIC@28211|Alphaproteobacteria,2K1QQ@204457|Sphingomonadales	204457|Sphingomonadales	S	membrane transporter protein	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
SRD3_k127_1311374_0	1112212.JH584235_gene2406	0.0	3018.0	COG2373@1|root,COG2373@2|Bacteria,1MV7J@1224|Proteobacteria,2TSAE@28211|Alphaproteobacteria,2K05R@204457|Sphingomonadales	204457|Sphingomonadales	S	Alpha-2-Macroglobulin	-	-	-	ko:K06894	-	-	-	-	ko00000	-	-	-	A2M,A2M_N,A2M_N_2,MG1
SRD3_k127_1311374_1	1112212.JH584235_gene2407	0.0	1194.0	COG4953@1|root,COG4953@2|Bacteria,1MUA9@1224|Proteobacteria,2TR2R@28211|Alphaproteobacteria,2K2MW@204457|Sphingomonadales	204457|Sphingomonadales	M	Penicillin-Binding Protein C-terminus Family	-	-	2.4.1.129	ko:K05367	ko00550,map00550	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	BiPBP_C,Transgly,Transpeptidase
SRD3_k127_1326041_9	1112212.JH584235_gene2939	4.177e-18	89.0	COG3134@1|root,COG3134@2|Bacteria,1NGQT@1224|Proteobacteria,2UMR2@28211|Alphaproteobacteria,2K745@204457|Sphingomonadales	204457|Sphingomonadales	S	Glycine zipper 2TM domain	-	-	-	-	-	-	-	-	-	-	-	-	Rick_17kDa_Anti
SRD3_k127_1326041_1	1112212.JH584235_gene2940	1.667e-114	383.0	COG4246@1|root,COG4246@2|Bacteria,1N7Y1@1224|Proteobacteria,2TTZW@28211|Alphaproteobacteria,2K10G@204457|Sphingomonadales	204457|Sphingomonadales	S	Esterase-like activity of phytase	-	-	-	-	-	-	-	-	-	-	-	-	Phytase-like
SRD3_k127_1326041_5	1112212.JH584235_gene2941	4.976e-48	175.0	COG0227@1|root,COG0227@2|Bacteria,1MZ57@1224|Proteobacteria,2UBQU@28211|Alphaproteobacteria,2K561@204457|Sphingomonadales	204457|Sphingomonadales	J	Belongs to the bacterial ribosomal protein bL28 family	rpmB	-	-	ko:K02902	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L28
SRD3_k127_1326041_10	1112212.JH584235_gene2942	2.489e-12	71.0	2BIWP@1|root,32D4U@2|Bacteria,1QRQI@1224|Proteobacteria,2VAW1@28211|Alphaproteobacteria,2K7MW@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1326041_3	1449076.JOOE01000003_gene3112	7.272e-70	245.0	COG0590@1|root,COG0590@2|Bacteria,1RGU0@1224|Proteobacteria,2U77Q@28211|Alphaproteobacteria,2K4E6@204457|Sphingomonadales	204457|Sphingomonadales	FJ	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)	tadA	-	3.5.4.33	ko:K11991	-	-	R10223	RC00477	ko00000,ko01000,ko03016	-	-	-	MafB19-deam
SRD3_k127_1326041_0	1112212.JH584235_gene2944	2.962e-248	772.0	COG1253@1|root,COG1253@2|Bacteria,1MV3P@1224|Proteobacteria,2TS80@28211|Alphaproteobacteria,2K087@204457|Sphingomonadales	204457|Sphingomonadales	S	COG1253 Hemolysins and related proteins containing CBS domains	-	-	-	ko:K03699	-	-	-	-	ko00000,ko02042	-	-	-	CBS,CorC_HlyC,DUF21
SRD3_k127_1326041_7	194867.ALBQ01000007_gene2186	9.083e-33	132.0	COG2372@1|root,COG2372@2|Bacteria,1N8SS@1224|Proteobacteria,2UFW5@28211|Alphaproteobacteria,2K6X3@204457|Sphingomonadales	204457|Sphingomonadales	S	copper resistance protein	-	-	-	ko:K07156	-	-	-	-	ko00000,ko02000	9.B.62.2	-	-	CopC
SRD3_k127_1326041_2	1112216.JH594426_gene3913	2.795e-100	335.0	COG1276@1|root,COG1276@2|Bacteria,1NHA2@1224|Proteobacteria,2VEVU@28211|Alphaproteobacteria,2KDU5@204457|Sphingomonadales	204457|Sphingomonadales	P	Copper resistance protein CopD	-	-	-	ko:K07245	-	-	-	-	ko00000,ko02000	9.B.62.1	-	-	CopD
SRD3_k127_1326041_6	1112216.JH594425_gene529	4.723e-41	159.0	COG3743@1|root,COG3743@2|Bacteria,1N76A@1224|Proteobacteria,2UFVP@28211|Alphaproteobacteria,2K4QR@204457|Sphingomonadales	204457|Sphingomonadales	S	rRNA binding	-	-	-	-	-	-	-	-	-	-	-	-	HHH_5
SRD3_k127_1326041_4	1081640.AGFU01000019_gene1917	3.44e-63	219.0	COG0151@1|root,COG0151@2|Bacteria,1MUAH@1224|Proteobacteria,2TQR5@28211|Alphaproteobacteria,2K0GD@204457|Sphingomonadales	204457|Sphingomonadales	F	Belongs to the GARS family	purD	-	6.3.4.13	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04144	RC00090,RC00166	ko00000,ko00001,ko00002,ko01000	-	-	-	GARS_A,GARS_C,GARS_N
SRD3_k127_1339800_4	570268.ANBB01000112_gene1628	0.0001502	50.0	COG1960@1|root,COG1960@2|Bacteria,2GIX8@201174|Actinobacteria	201174|Actinobacteria	I	acyl-CoA dehydrogenase	fadE9	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SRD3_k127_1339800_3	502025.Hoch_2949	4.816e-18	87.0	COG0236@1|root,COG0236@2|Bacteria,1QTBT@1224|Proteobacteria,4357W@68525|delta/epsilon subdivisions,2WZIX@28221|Deltaproteobacteria,2Z28P@29|Myxococcales	28221|Deltaproteobacteria	IQ	Phosphopantetheine attachment site	-	-	-	-	-	-	-	-	-	-	-	-	PP-binding
SRD3_k127_1339800_0	502025.Hoch_1177	1.237e-99	333.0	COG1250@1|root,COG1250@2|Bacteria,1MU9P@1224|Proteobacteria,42M6J@68525|delta/epsilon subdivisions,2WJZQ@28221|Deltaproteobacteria	28221|Deltaproteobacteria	I	PFAM 3-hydroxyacyl-CoA dehydrogenase	-	-	1.1.1.157	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	-	R01976,R05576,R06941	RC00029,RC00117	ko00000,ko00001,ko01000	-	-	-	3HCDH,3HCDH_N
SRD3_k127_1339800_2	1460640.JCM19046_1618	1.7e-20	100.0	COG0572@1|root,COG0572@2|Bacteria,1V8GA@1239|Firmicutes,4HINJ@91061|Bacilli,1ZH8Z@1386|Bacillus	91061|Bacilli	F	uridine kinase	-	-	-	-	-	-	-	-	-	-	-	-	AAA_18,PRK
SRD3_k127_1339800_1	1157638.KB892168_gene6567	7.434e-77	265.0	COG0367@1|root,COG0367@2|Bacteria,2GJIM@201174|Actinobacteria	201174|Actinobacteria	E	asparagine synthase	asnB	-	6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	-	R00578	RC00010	ko00000,ko00001,ko01000,ko01002	-	-	-	Asn_synthase,GATase_7
SRD3_k127_1350243_4	1549858.MC45_03325	2.735e-67	233.0	COG3637@1|root,COG3637@2|Bacteria,1MZ5U@1224|Proteobacteria,2TWHF@28211|Alphaproteobacteria,2K304@204457|Sphingomonadales	204457|Sphingomonadales	M	Carbohydrate-selective porin, OprB family	-	-	-	ko:K16080	-	-	-	-	ko00000,ko02000	1.B.4.2.2	-	-	OprB
SRD3_k127_1350243_5	685778.AORL01000019_gene1767	3.18e-43	158.0	COG1937@1|root,COG1937@2|Bacteria,1N6ZN@1224|Proteobacteria,2U9SD@28211|Alphaproteobacteria,2K5ZX@204457|Sphingomonadales	204457|Sphingomonadales	S	Metal-sensitive transcriptional repressor	-	-	-	-	-	-	-	-	-	-	-	-	Trns_repr_metal
SRD3_k127_1350243_6	1156935.QWE_04968	4.352e-10	61.0	COG3791@1|root,COG3791@2|Bacteria,1RBIH@1224|Proteobacteria,2U5D0@28211|Alphaproteobacteria,4BEY0@82115|Rhizobiaceae	28211|Alphaproteobacteria	S	Glutathione-dependent formaldehyde-activating	-	-	-	-	-	-	-	-	-	-	-	-	GFA
SRD3_k127_1350243_2	1112212.JH584235_gene2653	2.984e-165	521.0	COG0388@1|root,COG0388@2|Bacteria,1MXG5@1224|Proteobacteria,2TVCS@28211|Alphaproteobacteria,2K0V3@204457|Sphingomonadales	204457|Sphingomonadales	S	N-carbamoylputrescine amidase	aguB	-	3.5.1.53	ko:K12251	ko00330,ko01100,map00330,map01100	-	R01152	RC00096	ko00000,ko00001,ko01000	-	-	-	CN_hydrolase
SRD3_k127_1350243_3	1112216.JH594425_gene1294	3.196e-163	518.0	COG2957@1|root,COG2957@2|Bacteria,1MX65@1224|Proteobacteria,2U0RR@28211|Alphaproteobacteria,2K0B9@204457|Sphingomonadales	204457|Sphingomonadales	E	Belongs to the agmatine deiminase family	-	-	3.5.3.12	ko:K10536	ko00330,ko01100,map00330,map01100	-	R01416	RC00177	ko00000,ko00001,ko01000	-	-	-	PAD_porph
SRD3_k127_1350243_0	1112212.JH584235_gene2650	3.574e-282	875.0	COG2234@1|root,COG2234@2|Bacteria,1MV86@1224|Proteobacteria,2TVJ5@28211|Alphaproteobacteria,2K04D@204457|Sphingomonadales	204457|Sphingomonadales	S	Peptidase, M28	-	-	-	-	-	-	-	-	-	-	-	-	PA,Peptidase_M28
SRD3_k127_1350243_1	1112212.JH584235_gene2649	3.81e-218	691.0	COG1506@1|root,COG1506@2|Bacteria,1MUJ3@1224|Proteobacteria,2U08D@28211|Alphaproteobacteria,2KD2V@204457|Sphingomonadales	204457|Sphingomonadales	E	Prolyl oligopeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S9
SRD3_k127_1357185_7	1144305.PMI02_04262	1.733e-84	289.0	2AM81@1|root,31C2U@2|Bacteria,1RHKH@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1357185_1	1144305.PMI02_04263	1.157e-259	842.0	COG1874@1|root,COG1874@2|Bacteria,1QVSY@1224|Proteobacteria,2UVCP@28211|Alphaproteobacteria,2KBCG@204457|Sphingomonadales	204457|Sphingomonadales	G	TIGRFAM phage tail protein domain	-	-	-	-	-	-	-	-	-	-	-	-	Tail_P2_I
SRD3_k127_1357185_0	1144305.PMI02_04264	9.835e-284	892.0	COG3299@1|root,COG3299@2|Bacteria,1MWKI@1224|Proteobacteria,2UI72@28211|Alphaproteobacteria,2K6YV@204457|Sphingomonadales	204457|Sphingomonadales	S	Baseplate J-like protein	-	-	-	-	-	-	-	-	-	-	-	-	Baseplate_J
SRD3_k127_1357185_10	1144305.PMI02_04265	3.637e-44	166.0	COG3628@1|root,COG3628@2|Bacteria,1N23A@1224|Proteobacteria,2UER5@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Phage baseplate assembly protein W	-	-	-	ko:K06903	-	-	-	-	ko00000	-	-	-	GPW_gp25
SRD3_k127_1357185_2	1144305.PMI02_04266	7.324e-257	814.0	28NRK@1|root,332DP@2|Bacteria,1R3A3@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1357185_5	84531.JMTZ01000038_gene3637	2.727e-112	369.0	COG3501@1|root,COG3501@2|Bacteria,1MU7Q@1224|Proteobacteria,1RZ3X@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	protein and some similarities with VgrG protein	-	-	-	-	-	-	-	-	-	-	-	-	Phage_GPD
SRD3_k127_1357185_4	1144305.PMI02_04268	5.383e-147	473.0	COG3500@1|root,COG3500@2|Bacteria,1R67C@1224|Proteobacteria,2U3GW@28211|Alphaproteobacteria,2K7RW@204457|Sphingomonadales	204457|Sphingomonadales	S	Phage protein D	-	-	-	-	-	-	-	-	-	-	-	-	Phage_GPD
SRD3_k127_1357185_6	84531.JMTZ01000038_gene3640	8.173e-98	326.0	COG1652@1|root,COG1652@2|Bacteria,1NC3Q@1224|Proteobacteria,1SF7V@1236|Gammaproteobacteria,1X9DP@135614|Xanthomonadales	135614|Xanthomonadales	S	LysM domain	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1357185_8	1144305.PMI02_04271	5.966e-62	220.0	2DMQT@1|root,32T2H@2|Bacteria,1N1B2@1224|Proteobacteria,2UDE4@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	T4-like virus tail tube protein gp19	-	-	-	-	-	-	-	-	-	-	-	-	Phage_T4_gp19
SRD3_k127_1357185_3	1144305.PMI02_04272	7.658e-240	771.0	COG3497@1|root,COG3497@2|Bacteria,1NSAQ@1224|Proteobacteria	1224|Proteobacteria	S	Phage tail sheath protein subtilisin-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Phage_sheath_1C
SRD3_k127_1357185_9	261292.Nit79A3_1005	2.133e-59	206.0	2BECK@1|root,3283Q@2|Bacteria,1RKSC@1224|Proteobacteria,2VS57@28216|Betaproteobacteria	28216|Betaproteobacteria	S	TIGRFAM conserved	-	-	-	-	-	-	-	-	-	-	-	-	Phage_T4_gp19
SRD3_k127_136911_7	1112216.JH594425_gene1929	7.244e-56	201.0	COG3218@1|root,COG3218@2|Bacteria,1RKTW@1224|Proteobacteria,2UAXY@28211|Alphaproteobacteria,2K5KR@204457|Sphingomonadales	204457|Sphingomonadales	S	transport system auxiliary component	linN	-	-	ko:K18480	-	M00669	-	-	ko00000,ko00002,ko02000	3.A.1.27.1	-	-	ABC_trans_aux
SRD3_k127_136911_2	1449076.JOOE01000003_gene3837	5.214e-146	468.0	COG1463@1|root,COG1463@2|Bacteria,1MU4B@1224|Proteobacteria,2U1JN@28211|Alphaproteobacteria,2K12E@204457|Sphingomonadales	204457|Sphingomonadales	Q	ABC-type transport system involved in resistance to organic solvents, periplasmic component	-	-	-	ko:K02067	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaD
SRD3_k127_136911_4	1112214.AHIS01000081_gene3565	9.313e-140	449.0	COG1127@1|root,COG1127@2|Bacteria,1MUSD@1224|Proteobacteria,2TR2I@28211|Alphaproteobacteria,2K11G@204457|Sphingomonadales	204457|Sphingomonadales	Q	ABC-type transport system involved in resistance to organic solvents, ATPase component	-	-	-	ko:K02065	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	ABC_tran
SRD3_k127_136911_3	745310.G432_11210	4.278e-145	469.0	COG0767@1|root,COG0767@2|Bacteria,1MVPN@1224|Proteobacteria,2TSGS@28211|Alphaproteobacteria,2K10W@204457|Sphingomonadales	204457|Sphingomonadales	Q	ABC-type transport system involved in resistance to organic solvents, permease component	-	-	-	ko:K02066	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaE
SRD3_k127_136911_6	1112212.JH584235_gene1864	1.264e-83	282.0	COG0560@1|root,COG0560@2|Bacteria,1P4TB@1224|Proteobacteria,2UHTZ@28211|Alphaproteobacteria,2K3BN@204457|Sphingomonadales	204457|Sphingomonadales	E	haloacid dehalogenase-like hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	HAD
SRD3_k127_136911_1	1112212.JH584235_gene1863	2.086e-211	664.0	COG2733@1|root,COG2733@2|Bacteria,1MX3G@1224|Proteobacteria,2U15J@28211|Alphaproteobacteria,2K0FY@204457|Sphingomonadales	204457|Sphingomonadales	S	membrane	-	-	-	-	-	-	-	-	-	-	-	-	DUF445
SRD3_k127_136911_0	1112216.JH594425_gene1935	0.0	1570.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,2K0BI@204457|Sphingomonadales	204457|Sphingomonadales	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
SRD3_k127_136911_5	1112214.AHIS01000081_gene3572	7.556e-119	387.0	COG0845@1|root,COG0845@2|Bacteria,1MXGH@1224|Proteobacteria,2U18A@28211|Alphaproteobacteria,2K0EM@204457|Sphingomonadales	204457|Sphingomonadales	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	-	-	-	-	-	-	-	-	-	HlyD_D23
SRD3_k127_1373247_9	1294143.H681_14050	5.705e-21	95.0	COG2606@1|root,COG2606@2|Bacteria,1RD82@1224|Proteobacteria,1S235@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Prolyl-tRNA synthetase	-	-	-	-	-	-	-	-	-	-	-	-	tRNA_edit
SRD3_k127_1373247_4	1122962.AULH01000008_gene2067	8.71e-80	273.0	COG1834@1|root,COG1834@2|Bacteria,1MZ9U@1224|Proteobacteria,2TT08@28211|Alphaproteobacteria	28211|Alphaproteobacteria	E	COG1834 N-Dimethylarginine dimethylaminohydrolase	-	-	3.5.3.18	ko:K01482	-	-	-	-	ko00000,ko01000,ko04147	-	-	-	Amidinotransf
SRD3_k127_1373247_0	1112216.JH594425_gene3486	1.54e-178	570.0	COG0477@1|root,COG2814@2|Bacteria,1QTWR@1224|Proteobacteria,2TW1S@28211|Alphaproteobacteria,2K09D@204457|Sphingomonadales	204457|Sphingomonadales	EGP	Major facilitator superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SRD3_k127_1373247_3	1379701.JPJC01000259_gene3009	1.216e-90	302.0	COG0558@1|root,COG0558@2|Bacteria,1RCZ7@1224|Proteobacteria,2TUI7@28211|Alphaproteobacteria,2K47C@204457|Sphingomonadales	204457|Sphingomonadales	I	Belongs to the CDP-alcohol phosphatidyltransferase class-I family	pgsA	-	2.7.8.41,2.7.8.5	ko:K00995,ko:K08744	ko00564,ko01100,map00564,map01100	-	R01801,R02030	RC00002,RC00017,RC02795	ko00000,ko00001,ko01000	-	-	-	CDP-OH_P_transf
SRD3_k127_1373247_7	1112216.JH594425_gene3484	7.673e-33	128.0	COG1977@1|root,COG1977@2|Bacteria,1N0IE@1224|Proteobacteria,2UF4F@28211|Alphaproteobacteria,2K6UZ@204457|Sphingomonadales	204457|Sphingomonadales	H	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin	moaD	-	-	ko:K03636	ko04122,map04122	-	-	-	ko00000,ko00001	-	-	-	ThiS
SRD3_k127_1373247_6	1112216.JH594425_gene3483	1.757e-55	201.0	COG0314@1|root,COG0314@2|Bacteria,1RGUX@1224|Proteobacteria,2U73K@28211|Alphaproteobacteria,2K4HA@204457|Sphingomonadales	204457|Sphingomonadales	H	Molybdopterin converting factor, large subunit	moaE	-	2.8.1.12	ko:K03635	ko00790,ko01100,ko04122,map00790,map01100,map04122	-	R09395	RC02507	ko00000,ko00001,ko01000	-	-	-	MoaE
SRD3_k127_1373247_5	1112212.JH584235_gene859	5.78e-73	250.0	COG2335@1|root,COG2335@2|Bacteria,1RD06@1224|Proteobacteria,2U7H5@28211|Alphaproteobacteria,2K1N1@204457|Sphingomonadales	204457|Sphingomonadales	M	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.	-	-	-	-	-	-	-	-	-	-	-	-	Fasciclin
SRD3_k127_1373247_1	1112212.JH584235_gene858	1.267e-166	527.0	COG0583@1|root,COG0583@2|Bacteria,1MVA1@1224|Proteobacteria,2TSUS@28211|Alphaproteobacteria,2K012@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	-	-	-	ko:K04761	ko02026,map02026	-	-	-	ko00000,ko00001,ko03000	-	-	-	HTH_1,LysR_substrate
SRD3_k127_1373247_2	1112212.JH584235_gene857	2.658e-111	360.0	COG0450@1|root,COG0450@2|Bacteria,1MWPY@1224|Proteobacteria,2TV43@28211|Alphaproteobacteria,2K033@204457|Sphingomonadales	204457|Sphingomonadales	O	Alkyl hydroperoxide reductase	ahpC	-	1.11.1.15	ko:K03386	ko04214,map04214	-	-	-	ko00000,ko00001,ko01000,ko04147	-	-	-	1-cysPrx_C,AhpC-TSA
SRD3_k127_1373247_8	1112212.JH584235_gene856	7.3e-26	109.0	COG2128@1|root,COG2128@2|Bacteria,1RDRU@1224|Proteobacteria,2U8D7@28211|Alphaproteobacteria,2K15E@204457|Sphingomonadales	204457|Sphingomonadales	O	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	ahpD	-	-	ko:K04756	-	-	-	-	ko00000	-	-	-	CMD
SRD3_k127_139386_8	1112212.JH584235_gene3626	4.089e-05	48.0	COG3391@1|root,COG3391@2|Bacteria,1R6BZ@1224|Proteobacteria,2U2WX@28211|Alphaproteobacteria,2K3H4@204457|Sphingomonadales	204457|Sphingomonadales	S	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_139386_4	517722.AEUE01000002_gene2246	9.557e-63	225.0	COG3279@1|root,COG3279@2|Bacteria,1MUE8@1224|Proteobacteria,2TSPC@28211|Alphaproteobacteria	28211|Alphaproteobacteria	T	Response regulator of the LytR AlgR family	-	-	-	ko:K02477	-	-	-	-	ko00000,ko02022	-	-	-	LytTR,Response_reg
SRD3_k127_139386_3	1346791.M529_01120	3.306e-67	242.0	COG2972@1|root,COG2972@2|Bacteria,1MXVQ@1224|Proteobacteria,2U103@28211|Alphaproteobacteria,2K0W4@204457|Sphingomonadales	204457|Sphingomonadales	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,His_kinase
SRD3_k127_139386_0	1090320.KB900605_gene2385	8.078e-283	878.0	COG3119@1|root,COG3119@2|Bacteria,1MV92@1224|Proteobacteria,2TTXG@28211|Alphaproteobacteria,2K1IU@204457|Sphingomonadales	204457|Sphingomonadales	P	Arylsulfatase	-	-	3.1.6.1	ko:K01130	ko00140,ko00600,map00140,map00600	-	R03980,R04856	RC00128,RC00231	ko00000,ko00001,ko01000	-	-	-	Sulfatase
SRD3_k127_139386_2	1090320.KB900605_gene2386	8.858e-158	507.0	COG2175@1|root,COG2175@2|Bacteria,1MV5K@1224|Proteobacteria,2TQTZ@28211|Alphaproteobacteria,2JZYD@204457|Sphingomonadales	204457|Sphingomonadales	Q	dioxygenase	-	-	-	ko:K22303	-	-	-	-	ko00000,ko01000	-	-	-	TauD
SRD3_k127_139386_1	59538.XP_005966196.1	6.027e-208	656.0	KOG0637@1|root,KOG0637@2759|Eukaryota	2759|Eukaryota	S	sucrose transmembrane transporter activity	-	-	-	ko:K15378	-	-	-	-	ko00000,ko02000	2.A.2.4,2.A.2.6	-	-	MFS_2
SRD3_k127_139386_5	1144307.PMI04_02096	9.612e-56	198.0	COG1629@1|root,COG4771@2|Bacteria,1MWKN@1224|Proteobacteria,2UQ1N@28211|Alphaproteobacteria,2K0EZ@204457|Sphingomonadales	204457|Sphingomonadales	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SRD3_k127_1401458_4	1112214.AHIS01000016_gene1343	1.079e-78	267.0	COG1131@1|root,COG1131@2|Bacteria,1MUW7@1224|Proteobacteria,2TR2Q@28211|Alphaproteobacteria,2K0Z9@204457|Sphingomonadales	204457|Sphingomonadales	V	ABC transporter, ATP-binding protein	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
SRD3_k127_1401458_3	1112212.JH584235_gene3298	6.117e-88	297.0	COG1651@1|root,COG1651@2|Bacteria,1MY3H@1224|Proteobacteria,2TTXR@28211|Alphaproteobacteria,2K3ZK@204457|Sphingomonadales	204457|Sphingomonadales	O	Protein-disulfide isomerase	-	-	-	-	-	-	-	-	-	-	-	-	DSBA,Thioredoxin_4
SRD3_k127_1401458_0	1112212.JH584235_gene3297	2.058e-234	733.0	COG4783@1|root,COG4783@2|Bacteria,1MVFV@1224|Proteobacteria,2TTV2@28211|Alphaproteobacteria,2K0E5@204457|Sphingomonadales	204457|Sphingomonadales	S	Peptidase M48	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M48,TPR_16
SRD3_k127_1401458_1	555793.WSK_3847	2.565e-209	655.0	COG2425@1|root,COG2425@2|Bacteria,1MW56@1224|Proteobacteria,2TR2Y@28211|Alphaproteobacteria,2K1TM@204457|Sphingomonadales	204457|Sphingomonadales	S	VWA domain containing CoxE-like protein	-	-	-	-	-	-	-	-	-	-	-	-	VWA_CoxE
SRD3_k127_1401458_2	1038866.KB902775_gene5493	1.105e-96	320.0	COG1916@1|root,COG1916@2|Bacteria,1Q79N@1224|Proteobacteria,2TUBD@28211|Alphaproteobacteria,3JXBM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Evidence 4 Homologs of previously reported genes of	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1457567_4	1449076.JOOE01000001_gene2712	3.995e-57	206.0	2DHGE@1|root,2ZZNG@2|Bacteria,1P6PN@1224|Proteobacteria,2UY72@28211|Alphaproteobacteria,2KBU8@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	PilZ
SRD3_k127_1457567_1	1161401.ASJA01000003_gene2866	1.715e-204	672.0	COG1404@1|root,COG1404@2|Bacteria,1R9IJ@1224|Proteobacteria,2TQZ5@28211|Alphaproteobacteria,43Z0I@69657|Hyphomonadaceae	28211|Alphaproteobacteria	O	Subtilase family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
SRD3_k127_1457567_2	1449076.JOOE01000002_gene1518	2.202e-94	315.0	COG1213@1|root,COG1213@2|Bacteria,1RITD@1224|Proteobacteria,2UD1M@28211|Alphaproteobacteria,2K50F@204457|Sphingomonadales	204457|Sphingomonadales	M	MobA-like NTP transferase domain	-	-	-	-	-	-	-	-	-	-	-	-	NTP_transf_3
SRD3_k127_1457567_0	1449076.JOOE01000002_gene1517	1.838e-209	654.0	COG1260@1|root,COG1260@2|Bacteria,1N0D9@1224|Proteobacteria,2TSH8@28211|Alphaproteobacteria,2K1V4@204457|Sphingomonadales	204457|Sphingomonadales	I	Inositol-3-phosphate synthase	-	-	5.5.1.4	ko:K01858	ko00521,ko00562,ko01100,ko01130,map00521,map00562,map01100,map01130	-	R07324	RC01804	ko00000,ko00001,ko01000	-	-	-	Inos-1-P_synth
SRD3_k127_1457567_3	1219049.SP5_073_00090	7.357e-94	314.0	COG0558@1|root,COG0558@2|Bacteria,1N5KT@1224|Proteobacteria,2UEHB@28211|Alphaproteobacteria,2KDKU@204457|Sphingomonadales	204457|Sphingomonadales	I	CDP-alcohol phosphatidyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	CDP-OH_P_transf
SRD3_k127_1466659_5	1549858.MC45_07430	3.368e-142	456.0	COG2207@1|root,COG3449@1|root,COG2207@2|Bacteria,COG3449@2|Bacteria,1MWTF@1224|Proteobacteria,2TRY4@28211|Alphaproteobacteria,2K22W@204457|Sphingomonadales	204457|Sphingomonadales	K	AraC family transcriptional regulator	-	-	-	ko:K13652	-	-	-	-	ko00000,ko03000	-	-	-	GyrI-like,HTH_18
SRD3_k127_1466659_6	1112212.JH584235_gene1437	1.825e-136	447.0	COG0531@1|root,COG0531@2|Bacteria,1MUA2@1224|Proteobacteria,2TRWS@28211|Alphaproteobacteria,2K02K@204457|Sphingomonadales	204457|Sphingomonadales	E	amino acid	-	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease_2
SRD3_k127_1466659_13	56107.Cylst_2394	4.706e-11	71.0	COG5492@1|root,COG5492@2|Bacteria,1GDKC@1117|Cyanobacteria	1117|Cyanobacteria	N	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1466659_9	1470591.BW41_04041	5.508e-93	316.0	COG3594@1|root,COG3594@2|Bacteria,1NN5Z@1224|Proteobacteria,2USF1@28211|Alphaproteobacteria,2KA67@204457|Sphingomonadales	204457|Sphingomonadales	G	Acyltransferase family	-	-	-	ko:K13663	-	-	-	-	ko00000,ko01000	-	-	-	Acyl_transf_3
SRD3_k127_1466659_7	1549858.MC45_01490	4.366e-123	407.0	COG0657@1|root,COG0657@2|Bacteria,1R4AU@1224|Proteobacteria,2UBDM@28211|Alphaproteobacteria,2K6TD@204457|Sphingomonadales	204457|Sphingomonadales	I	Carboxylesterase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3
SRD3_k127_1466659_1	1449076.JOOE01000006_gene635	1.128e-317	976.0	COG1233@1|root,COG1233@2|Bacteria,1MV2R@1224|Proteobacteria,2TSR0@28211|Alphaproteobacteria,2JZXX@204457|Sphingomonadales	204457|Sphingomonadales	Q	Oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	Amino_oxidase,NAD_binding_8
SRD3_k127_1466659_3	1112212.JH584235_gene1435	2.729e-217	685.0	COG4638@1|root,COG4638@2|Bacteria,1NU1N@1224|Proteobacteria,2UP5R@28211|Alphaproteobacteria,2KCZV@204457|Sphingomonadales	204457|Sphingomonadales	P	Ring hydroxylating alpha subunit (catalytic domain)	-	-	-	-	-	-	-	-	-	-	-	-	Rieske,Ring_hydroxyl_A
SRD3_k127_1466659_14	1379701.JPJC01000004_gene351	5.303e-05	47.0	COG0009@1|root,COG0009@2|Bacteria,1MVPM@1224|Proteobacteria,2TRIM@28211|Alphaproteobacteria,2K1JS@204457|Sphingomonadales	204457|Sphingomonadales	J	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine	-	-	2.7.7.87	ko:K07566	-	-	R10463	RC00745	ko00000,ko01000,ko03009,ko03016	-	-	-	SUA5,Sua5_yciO_yrdC
SRD3_k127_1466659_11	1112212.JH584235_gene1434	2.71e-78	269.0	COG3226@1|root,COG3226@2|Bacteria,1QUS9@1224|Proteobacteria,2U8K7@28211|Alphaproteobacteria,2K4MV@204457|Sphingomonadales	204457|Sphingomonadales	K	BetI-type transcriptional repressor, C-terminal	-	-	-	-	-	-	-	-	-	-	-	-	TetR_C_6,TetR_N
SRD3_k127_1466659_8	1123269.NX02_18275	1.938e-99	329.0	COG4122@1|root,COG4122@2|Bacteria,1N57D@1224|Proteobacteria,2TT8Y@28211|Alphaproteobacteria,2K1GT@204457|Sphingomonadales	204457|Sphingomonadales	S	O-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_24
SRD3_k127_1466659_10	491916.RHECIAT_CH0002699	7.895e-84	284.0	COG1309@1|root,COG1309@2|Bacteria,1NM93@1224|Proteobacteria,2U19J@28211|Alphaproteobacteria,4BD4G@82115|Rhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SRD3_k127_1466659_2	1090319.KE386571_gene925	1.498e-233	729.0	COG0624@1|root,COG0624@2|Bacteria,1MWJS@1224|Proteobacteria,2TUHT@28211|Alphaproteobacteria,2K1MW@204457|Sphingomonadales	204457|Sphingomonadales	E	Acetylornithine deacetylase Succinyl-diaminopimelate	-	-	-	-	-	-	-	-	-	-	-	-	M20_dimer,Peptidase_M20,Peptidase_M28
SRD3_k127_1466659_12	745310.G432_15705	7.19e-31	129.0	2F929@1|root,341DY@2|Bacteria,1N7EV@1224|Proteobacteria,2UINC@28211|Alphaproteobacteria,2K6AB@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1466659_0	1112214.AHIS01000063_gene2739	0.0	1184.0	COG0171@1|root,COG0388@1|root,COG0171@2|Bacteria,COG0388@2|Bacteria,1MU9U@1224|Proteobacteria,2TRAU@28211|Alphaproteobacteria,2K0R3@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source	nadE	-	6.3.5.1	ko:K01950	ko00760,ko01100,map00760,map01100	M00115	R00257	RC00010,RC00100	ko00000,ko00001,ko00002,ko01000	-	-	-	CN_hydrolase,NAD_synthase
SRD3_k127_1466659_4	588932.JHOF01000018_gene1215	2.094e-175	575.0	COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,1MWKN@1224|Proteobacteria,2VFCK@28211|Alphaproteobacteria	28211|Alphaproteobacteria	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SRD3_k127_1538225_10	1449076.JOOE01000001_gene1681	3.552e-38	143.0	COG0251@1|root,COG0251@2|Bacteria,1RD6W@1224|Proteobacteria,2U8MG@28211|Alphaproteobacteria,2K4VB@204457|Sphingomonadales	204457|Sphingomonadales	J	Belongs to the RutC family	-	-	3.5.99.5	ko:K09021,ko:K15067	ko00240,ko00380,ko01100,map00240,map00380,map01100	-	R03887,R09982	RC01015,RC02768	ko00000,ko00001,ko01000	-	-	-	Ribonuc_L-PSP
SRD3_k127_1538225_4	1449076.JOOE01000001_gene1682	2.638e-84	290.0	COG2021@1|root,COG2021@2|Bacteria,1QVBR@1224|Proteobacteria,2TWEP@28211|Alphaproteobacteria,2KEF6@204457|Sphingomonadales	204457|Sphingomonadales	E	May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation	rutD	-	-	ko:K09023	ko00240,ko01100,map00240,map01100	-	R09983	RC02769	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1
SRD3_k127_1538225_1	1449076.JOOE01000001_gene1683	7.222e-222	690.0	COG2141@1|root,COG2141@2|Bacteria,1MXZH@1224|Proteobacteria,2TQJH@28211|Alphaproteobacteria,2K3GK@204457|Sphingomonadales	204457|Sphingomonadales	C	Catalyzes the pyrimidine ring opening between N-3 and C- 4 by an unusual flavin hydroperoxide-catalyzed mechanism to yield ureidoacrylate peracid. It cleaves pyrmidine rings directly by adding oxygen atoms, making a toxic ureidoacrylate peracid product which can be spontaneously reduced to ureidoacrylate	rutA	-	1.14.99.46	ko:K09018	ko00240,ko01100,map00240,map01100	-	R09936	RC02732	ko00000,ko00001,ko01000	-	-	-	Bac_luciferase
SRD3_k127_1538225_3	1081640.AGFU01000055_gene137	5.328e-98	334.0	COG2755@1|root,COG2755@2|Bacteria,1R7BU@1224|Proteobacteria,2U8T3@28211|Alphaproteobacteria,2K0RU@204457|Sphingomonadales	204457|Sphingomonadales	E	GDSL-like Lipase/Acylhydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
SRD3_k127_1538225_11	1121123.AUAO01000002_gene480	6.076e-26	117.0	2EBV0@1|root,335UG@2|Bacteria,1NETE@1224|Proteobacteria,2UF5H@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1538225_6	1035191.HMPREF0185_01092	1.197e-60	216.0	COG1595@1|root,COG1595@2|Bacteria,1PBHM@1224|Proteobacteria,2UB0K@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
SRD3_k127_1538225_7	194867.ALBQ01000002_gene878	9.474e-51	187.0	2E5AF@1|root,3302M@2|Bacteria,1NEU4@1224|Proteobacteria,2UI3N@28211|Alphaproteobacteria,2K5G5@204457|Sphingomonadales	204457|Sphingomonadales	S	EF hand	-	-	-	-	-	-	-	-	-	-	-	-	EF-hand_5
SRD3_k127_1538225_5	1112216.JH594425_gene2443	1.473e-62	224.0	COG5126@1|root,COG5126@2|Bacteria,1NH5D@1224|Proteobacteria,2UJHN@28211|Alphaproteobacteria,2KDA1@204457|Sphingomonadales	204457|Sphingomonadales	DTZ	EF hand	-	-	-	-	-	-	-	-	-	-	-	-	EF-hand_5
SRD3_k127_1538225_0	1549858.MC45_16090	2.687e-266	831.0	2DM0M@1|root,3175D@2|Bacteria,1MYGG@1224|Proteobacteria,2UA4C@28211|Alphaproteobacteria,2K28U@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1538225_2	1112212.JH584235_gene979	1.065e-190	607.0	COG1533@1|root,COG1533@2|Bacteria,1MW0H@1224|Proteobacteria,2TQQB@28211|Alphaproteobacteria,2K118@204457|Sphingomonadales	204457|Sphingomonadales	L	DNA repair photolyase	-	-	-	-	-	-	-	-	-	-	-	-	Radical_SAM
SRD3_k127_1538225_9	194867.ALBQ01000018_gene2593	4.846e-42	156.0	COG3324@1|root,COG3324@2|Bacteria,1N0AD@1224|Proteobacteria,2UI93@28211|Alphaproteobacteria,2K6G6@204457|Sphingomonadales	204457|Sphingomonadales	S	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	ko:K06996	-	-	-	-	ko00000	-	-	-	Glyoxalase
SRD3_k127_1538225_8	1112212.JH584235_gene977	1.226e-43	164.0	2CD5S@1|root,333ZI@2|Bacteria,1N8B8@1224|Proteobacteria,2UFWK@28211|Alphaproteobacteria,2K72N@204457|Sphingomonadales	204457|Sphingomonadales	S	Putative bacterial sensory transduction regulator	-	-	-	-	-	-	-	-	-	-	-	-	YbjN
SRD3_k127_1546779_6	1192759.AKIB01000026_gene2160	7.154e-125	403.0	COG4221@1|root,COG4221@2|Bacteria,1MVYG@1224|Proteobacteria,2TSTP@28211|Alphaproteobacteria,2K8WB@204457|Sphingomonadales	204457|Sphingomonadales	S	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
SRD3_k127_1546779_5	702113.PP1Y_AT11594	6.278e-147	471.0	COG4221@1|root,COG4221@2|Bacteria,1MW86@1224|Proteobacteria,2TSEM@28211|Alphaproteobacteria,2K9JF@204457|Sphingomonadales	204457|Sphingomonadales	S	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
SRD3_k127_1546779_10	1379701.JPJC01000255_gene1743	3.708e-71	248.0	COG4567@1|root,COG4567@2|Bacteria,1RD7J@1224|Proteobacteria,2TSK7@28211|Alphaproteobacteria,2K3WR@204457|Sphingomonadales	204457|Sphingomonadales	T	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain	-	-	-	ko:K15012	ko02020,map02020	M00523	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	HTH_8,Response_reg
SRD3_k127_1546779_4	1449076.JOOE01000002_gene1121	2.039e-155	507.0	COG4191@1|root,COG4191@2|Bacteria,1MWR3@1224|Proteobacteria,2TSS0@28211|Alphaproteobacteria,2K2QQ@204457|Sphingomonadales	204457|Sphingomonadales	T	Histidine kinase	-	-	2.7.13.3	ko:K15011	ko02020,map02020	M00523	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c
SRD3_k127_1546779_9	1120705.FG95_00366	9.217e-78	265.0	COG3346@1|root,COG3346@2|Bacteria,1MWWG@1224|Proteobacteria,2U0N5@28211|Alphaproteobacteria,2K2RE@204457|Sphingomonadales	204457|Sphingomonadales	S	SURF1-like protein	-	-	-	ko:K14998	-	-	-	-	ko00000,ko03029	3.D.4.8	-	-	SURF1
SRD3_k127_1546779_11	1123267.JONN01000001_gene1525	2.887e-34	138.0	COG3125@1|root,COG3125@2|Bacteria,1RHE5@1224|Proteobacteria,2U9NH@28211|Alphaproteobacteria,2K5TH@204457|Sphingomonadales	204457|Sphingomonadales	C	cytochrome o ubiquinol oxidase	-	-	-	ko:K02300	ko00190,ko01100,map00190,map01100	M00417	-	-	ko00000,ko00001,ko00002	3.D.4.5	-	-	COX4_pro
SRD3_k127_1546779_7	1090320.KB900605_gene3688	1.678e-91	305.0	COG1845@1|root,COG1845@2|Bacteria,1MUCK@1224|Proteobacteria,2U0NA@28211|Alphaproteobacteria,2KD45@204457|Sphingomonadales	204457|Sphingomonadales	C	Cytochrome c oxidase subunit III	-	-	-	ko:K02299	ko00190,ko01100,map00190,map01100	M00417	-	-	ko00000,ko00001,ko00002	3.D.4.5	-	-	COX3
SRD3_k127_1546779_0	1449076.JOOE01000002_gene1125	0.0	1237.0	COG0843@1|root,COG0843@2|Bacteria,1MU7S@1224|Proteobacteria,2TQP1@28211|Alphaproteobacteria,2K0Q3@204457|Sphingomonadales	204457|Sphingomonadales	C	Belongs to the heme-copper respiratory oxidase family	-	-	-	-	-	-	-	-	-	-	-	-	COX1
SRD3_k127_1546779_3	1449076.JOOE01000002_gene1126	2.278e-165	525.0	COG1622@1|root,COG1622@2|Bacteria,1MWHZ@1224|Proteobacteria,2U0IR@28211|Alphaproteobacteria,2JZY6@204457|Sphingomonadales	204457|Sphingomonadales	C	ubiquinol oxidase subunit	cyoA	-	1.10.3.10	ko:K02297	ko00190,ko01100,map00190,map01100	M00417	R11335	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.5	-	-	COX2,COX_ARM
SRD3_k127_1546779_2	1449076.JOOE01000002_gene1127	5.312e-229	714.0	COG0477@1|root,COG0477@2|Bacteria,1MU46@1224|Proteobacteria,2TQVP@28211|Alphaproteobacteria,2K03E@204457|Sphingomonadales	204457|Sphingomonadales	EGP	Arabinose ABC transporter permease	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
SRD3_k127_1546779_8	279238.Saro_2859	3.877e-91	307.0	COG0596@1|root,COG0596@2|Bacteria,1R3U1@1224|Proteobacteria,2TVFV@28211|Alphaproteobacteria,2KAG5@204457|Sphingomonadales	204457|Sphingomonadales	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
SRD3_k127_1546779_1	1449076.JOOE01000002_gene744	8.908e-256	790.0	COG0404@1|root,COG0404@2|Bacteria,1MWZS@1224|Proteobacteria,2TSVD@28211|Alphaproteobacteria,2K1VS@204457|Sphingomonadales	204457|Sphingomonadales	E	Aminomethyltransferase folate-binding domain	-	-	2.1.1.341	ko:K15066	ko00627,ko01120,map00627,map01120	-	R09271,R10136	RC00113,RC00392	ko00000,ko00001,ko01000	-	-	-	GCV_T,GCV_T_C
SRD3_k127_1572391_9	1449076.JOOE01000002_gene1075	1.598e-21	94.0	2FHNJ@1|root,349G8@2|Bacteria,1P0XF@1224|Proteobacteria,2UUY2@28211|Alphaproteobacteria,2K299@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	GT87
SRD3_k127_1572391_3	1449076.JOOE01000002_gene1076	1.702e-165	528.0	COG0451@1|root,COG0451@2|Bacteria,1NYJW@1224|Proteobacteria,2U9PX@28211|Alphaproteobacteria,2K1SS@204457|Sphingomonadales	204457|Sphingomonadales	GM	GDP-mannose 4,6 dehydratase	-	-	4.2.1.46	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	M00793	R06513	RC00402	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase
SRD3_k127_1572391_0	1449076.JOOE01000002_gene1077	0.0	1066.0	COG0028@1|root,COG0028@2|Bacteria,1MYUS@1224|Proteobacteria,2U38V@28211|Alphaproteobacteria,2K1ID@204457|Sphingomonadales	204457|Sphingomonadales	EH	Belongs to the TPP enzyme family	-	-	2.2.1.6	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R00006,R00014,R00226,R03050,R04672,R04673,R08648	RC00027,RC00106,RC01192,RC02744,RC02893	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
SRD3_k127_1572391_7	1449076.JOOE01000002_gene1078	1.373e-63	229.0	COG2246@1|root,COG2246@2|Bacteria,1P05N@1224|Proteobacteria,2UUS5@28211|Alphaproteobacteria,2K5HH@204457|Sphingomonadales	204457|Sphingomonadales	S	GtrA-like protein	-	-	-	-	-	-	-	-	-	-	-	-	GtrA
SRD3_k127_1572391_4	983920.Y88_1797	1.822e-113	385.0	COG2227@1|root,COG2227@2|Bacteria,1R7WM@1224|Proteobacteria,2UG59@28211|Alphaproteobacteria	28211|Alphaproteobacteria	H	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_23
SRD3_k127_1572391_1	1449076.JOOE01000002_gene1079	4.827e-189	596.0	COG0451@1|root,COG0451@2|Bacteria,1MV73@1224|Proteobacteria,2TU81@28211|Alphaproteobacteria,2K2D3@204457|Sphingomonadales	204457|Sphingomonadales	M	Polysaccharide biosynthesis protein	ddhB	-	4.2.1.45	ko:K01709	ko00520,map00520	-	R02426	RC00402	ko00000,ko00001,ko01000	-	-	-	GDP_Man_Dehyd
SRD3_k127_1572391_8	1162668.LFE_1324	4.337e-56	205.0	COG1208@1|root,COG1208@2|Bacteria,3J0K1@40117|Nitrospirae	40117|Nitrospirae	JM	Nucleotidyl transferase	rfbF	-	2.7.7.33	ko:K00978	ko00500,ko00520,ko01100,map00500,map00520,map01100	-	R00956	RC00002	ko00000,ko00001,ko01000	-	-	-	NTP_transferase
SRD3_k127_1572391_2	1449076.JOOE01000002_gene1081	5.589e-180	581.0	COG1807@1|root,COG1807@2|Bacteria,1N5WU@1224|Proteobacteria,2TZ8U@28211|Alphaproteobacteria,2K2JP@204457|Sphingomonadales	204457|Sphingomonadales	M	Dolichyl-phosphate-mannose-protein mannosyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	PMT_2
SRD3_k127_1572391_6	1112214.AHIS01000063_gene2735	1.083e-65	225.0	COG3785@1|root,COG3785@2|Bacteria,1RHM7@1224|Proteobacteria,2U9MS@28211|Alphaproteobacteria,2K54K@204457|Sphingomonadales	204457|Sphingomonadales	S	DNA-binding protein	-	-	-	ko:K11940	-	-	-	-	ko00000,ko03036	-	-	-	YccV-like
SRD3_k127_1572391_5	1123269.NX02_13980	5.174e-84	282.0	COG0454@1|root,COG0456@2|Bacteria,1QWA8@1224|Proteobacteria,2TWUD@28211|Alphaproteobacteria,2K4N3@204457|Sphingomonadales	204457|Sphingomonadales	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10
SRD3_k127_1655058_2	1112212.JH584235_gene3542	3.531e-69	244.0	2E7B7@1|root,331UM@2|Bacteria,1N6KN@1224|Proteobacteria,2UD50@28211|Alphaproteobacteria,2K5JV@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1655058_0	685778.AORL01000019_gene1883	3.386e-180	571.0	COG0673@1|root,COG0673@2|Bacteria,1MWUH@1224|Proteobacteria,2TV13@28211|Alphaproteobacteria,2K106@204457|Sphingomonadales	204457|Sphingomonadales	S	Oxidoreductase family, C-terminal alpha/beta domain	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA_C
SRD3_k127_1655058_1	1112216.JH594425_gene2665	4.687e-137	443.0	COG2382@1|root,COG2382@2|Bacteria,1Q7SQ@1224|Proteobacteria,2U21A@28211|Alphaproteobacteria,2K379@204457|Sphingomonadales	204457|Sphingomonadales	P	Putative esterase	-	-	-	ko:K07214	-	-	-	-	ko00000	-	-	-	Esterase
SRD3_k127_1658632_3	1331060.RLDS_07665	9.314e-71	242.0	COG4094@1|root,COG4094@2|Bacteria,1RDF9@1224|Proteobacteria,2U7NM@28211|Alphaproteobacteria,2K2CX@204457|Sphingomonadales	204457|Sphingomonadales	S	NnrU protein	-	-	-	-	-	-	-	-	-	-	-	-	NnrU
SRD3_k127_1658632_0	1112214.AHIS01000047_gene2155	9.588e-254	784.0	COG0156@1|root,COG0156@2|Bacteria,1MVVH@1224|Proteobacteria,2TQXI@28211|Alphaproteobacteria,2K08Q@204457|Sphingomonadales	204457|Sphingomonadales	E	5-aminolevulinic acid synthase	hemA	-	2.3.1.37	ko:K00643	ko00260,ko00860,ko01100,ko01110,map00260,map00860,map01100,map01110	-	R00830	RC00004,RC02815	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
SRD3_k127_1658632_1	1112212.JH584235_gene2634	6.724e-122	396.0	COG0796@1|root,COG0796@2|Bacteria,1NAI2@1224|Proteobacteria,2TSR7@28211|Alphaproteobacteria,2K1X9@204457|Sphingomonadales	204457|Sphingomonadales	M	Provides the (R)-glutamate required for cell wall biosynthesis	murI	-	5.1.1.3	ko:K01776	ko00471,ko01100,map00471,map01100	-	R00260	RC00302	ko00000,ko00001,ko01000,ko01011	-	-	-	Asp_Glu_race
SRD3_k127_1658632_2	1112212.JH584235_gene2633	1.225e-92	309.0	COG0344@1|root,COG0344@2|Bacteria,1RD4Z@1224|Proteobacteria,2U7BZ@28211|Alphaproteobacteria,2K0BP@204457|Sphingomonadales	204457|Sphingomonadales	I	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP	plsY	-	2.3.1.15	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R00851,R09380	RC00004,RC00039,RC00041	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	G3P_acyltransf
SRD3_k127_1658632_4	1112216.JH594425_gene1275	7.439e-14	73.0	COG0758@1|root,COG0758@2|Bacteria,1MVF6@1224|Proteobacteria,2TRQE@28211|Alphaproteobacteria,2K08N@204457|Sphingomonadales	204457|Sphingomonadales	LU	Rossmann fold nucleotide-binding protein involved in DNA uptake	dprA	-	-	ko:K04096	-	-	-	-	ko00000	-	-	-	DNA_processg_A
SRD3_k127_1673522_3	627192.SLG_00820	1.575e-304	938.0	COG0459@1|root,COG0459@2|Bacteria,1MURR@1224|Proteobacteria,2TS07@28211|Alphaproteobacteria,2K0H3@204457|Sphingomonadales	204457|Sphingomonadales	O	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions	groL	-	-	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	-	-	-	Cpn60_TCP1
SRD3_k127_1673522_16	1219049.SP5_018_00640	5.432e-51	182.0	COG0234@1|root,COG0234@2|Bacteria,1MZ2X@1224|Proteobacteria,2U9AQ@28211|Alphaproteobacteria,2K539@204457|Sphingomonadales	204457|Sphingomonadales	O	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter	groS	-	-	ko:K04078	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	Cpn10
SRD3_k127_1673522_6	536019.Mesop_3081	3.735e-205	647.0	COG1415@1|root,COG1415@2|Bacteria,1QQ3V@1224|Proteobacteria,2TRG5@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Protein of unknown function (DUF763)	MA20_26605	-	-	ko:K09003	-	-	-	-	ko00000	-	-	-	DUF763
SRD3_k127_1673522_2	1112212.JH584235_gene1649	1.327e-314	972.0	COG0616@1|root,COG0616@2|Bacteria,1MUXE@1224|Proteobacteria,2TSXA@28211|Alphaproteobacteria,2K1TY@204457|Sphingomonadales	204457|Sphingomonadales	OU	signal peptide peptidase	sppA	-	-	ko:K04773	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_S49
SRD3_k127_1673522_13	1449076.JOOE01000003_gene3199	3.455e-85	289.0	COG1247@1|root,COG1247@2|Bacteria,1RGU8@1224|Proteobacteria,2UAVJ@28211|Alphaproteobacteria,2KD8Y@204457|Sphingomonadales	204457|Sphingomonadales	M	Acetyltransferase (GNAT) domain	-	-	2.3.1.183	ko:K03823	ko00440,ko01130,map00440,map01130	-	R08871,R08938	RC00004,RC00064	ko00000,ko00001,ko01000	-	-	-	Acetyltransf_4
SRD3_k127_1673522_0	194867.ALBQ01000017_gene2387	0.0	1530.0	COG0060@1|root,COG0060@2|Bacteria,1MVBQ@1224|Proteobacteria,2TR3N@28211|Alphaproteobacteria,2K0GR@204457|Sphingomonadales	204457|Sphingomonadales	J	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)	ileS	-	6.1.1.5	ko:K01870	ko00970,map00970	M00359,M00360	R03656	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,tRNA-synt_1,zf-FPG_IleRS
SRD3_k127_1673522_15	1470591.BW41_01588	3.839e-72	246.0	COG0597@1|root,COG0597@2|Bacteria,1RGV9@1224|Proteobacteria,2UBUC@28211|Alphaproteobacteria,2K4K3@204457|Sphingomonadales	204457|Sphingomonadales	MU	This protein specifically catalyzes the removal of signal peptides from prolipoproteins	lspA	-	3.4.23.36	ko:K03101	ko03060,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_A8
SRD3_k127_1673522_17	1112212.JH584235_gene1645	1.227e-49	179.0	2C068@1|root,30N9J@2|Bacteria,1RG08@1224|Proteobacteria,2U9FG@28211|Alphaproteobacteria,2K56D@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF3035)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3035
SRD3_k127_1673522_9	745310.G432_09795	2.405e-129	419.0	COG0601@1|root,COG0601@2|Bacteria,1MU8Z@1224|Proteobacteria,2TTN3@28211|Alphaproteobacteria,2K2XV@204457|Sphingomonadales	204457|Sphingomonadales	EP	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00439	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25	-	-	BPD_transp_1
SRD3_k127_1673522_11	1030157.AFMP01000013_gene3344	4.181e-109	369.0	COG1173@1|root,COG1173@2|Bacteria,1MU26@1224|Proteobacteria,2TTEV@28211|Alphaproteobacteria,2K2QZ@204457|Sphingomonadales	204457|Sphingomonadales	EP	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00439	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25	-	-	BPD_transp_1
SRD3_k127_1673522_7	745310.G432_09785	2.145e-186	597.0	COG1123@1|root,COG4172@2|Bacteria,1MU09@1224|Proteobacteria,2TQP0@28211|Alphaproteobacteria,2K1VP@204457|Sphingomonadales	204457|Sphingomonadales	P	Belongs to the ABC transporter superfamily	-	-	-	ko:K02031,ko:K02032,ko:K13896	ko02010,ko02024,map02010,map02024	M00239,M00349	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.21,3.A.1.5.24	-	-	ABC_tran,oligo_HPY
SRD3_k127_1673522_10	1112212.JH584235_gene1644	3.776e-110	365.0	2C5U9@1|root,30FF7@2|Bacteria,1N2U0@1224|Proteobacteria,2UIAF@28211|Alphaproteobacteria,2K33C@204457|Sphingomonadales	204457|Sphingomonadales	S	Bacterial protein of unknown function (Gcw_chp)	-	-	-	-	-	-	-	-	-	-	-	-	Gcw_chp
SRD3_k127_1673522_8	1090319.KE386571_gene3051	3.538e-164	527.0	COG3264@1|root,COG3264@2|Bacteria,1MWSA@1224|Proteobacteria,2TRKK@28211|Alphaproteobacteria,2K0A6@204457|Sphingomonadales	204457|Sphingomonadales	M	mechanosensitive ion channel	-	-	-	-	-	-	-	-	-	-	-	-	MS_channel
SRD3_k127_1673522_5	1112212.JH584235_gene1643	3.204e-229	713.0	COG0626@1|root,COG0626@2|Bacteria,1MU9E@1224|Proteobacteria,2TS8Z@28211|Alphaproteobacteria,2K0WB@204457|Sphingomonadales	204457|Sphingomonadales	E	cystathionine beta-lyase	metC	-	4.4.1.8	ko:K01760	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	M00017	R00782,R01286,R02408,R04941	RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303	ko00000,ko00001,ko00002,ko01000	-	-	-	Cys_Met_Meta_PP
SRD3_k127_1673522_12	1192759.AKIB01000014_gene1676	1.637e-86	286.0	COG0780@1|root,COG0780@2|Bacteria,1MW0M@1224|Proteobacteria,2U57X@28211|Alphaproteobacteria,2K3W2@204457|Sphingomonadales	204457|Sphingomonadales	S	Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily	queF	-	1.7.1.13	ko:K09457	ko00790,ko01100,map00790,map01100	-	R07605	RC01875	ko00000,ko00001,ko01000,ko03016	-	-	-	QueF
SRD3_k127_1673522_1	1112212.JH584235_gene1640	0.0	1317.0	COG0438@1|root,COG0438@2|Bacteria,1R3Q9@1224|Proteobacteria,2TUPF@28211|Alphaproteobacteria,2K0U6@204457|Sphingomonadales	204457|Sphingomonadales	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_4,Glycos_transf_1
SRD3_k127_1673522_4	1112212.JH584235_gene1639	2.146e-257	798.0	COG2152@1|root,COG2152@2|Bacteria,1MX8M@1224|Proteobacteria,2TUGF@28211|Alphaproteobacteria,2K1RD@204457|Sphingomonadales	204457|Sphingomonadales	G	beta-1,4-mannooligosaccharide phosphorylase	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_130
SRD3_k127_1673522_14	452662.SJA_C1-06940	6.434e-83	279.0	COG1297@1|root,COG1297@2|Bacteria,1N7SK@1224|Proteobacteria,2TRCZ@28211|Alphaproteobacteria,2K1RU@204457|Sphingomonadales	204457|Sphingomonadales	S	Transporter	-	-	-	-	-	-	-	-	-	-	-	-	OPT
SRD3_k127_1694244_1	702113.PP1Y_Mpl5856	1.648e-148	475.0	COG4591@1|root,COG4591@2|Bacteria,1Q2BY@1224|Proteobacteria,2TVP1@28211|Alphaproteobacteria,2K3FR@204457|Sphingomonadales	204457|Sphingomonadales	M	MacB-like periplasmic core domain	-	-	-	ko:K09808	ko02010,map02010	M00255	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.125	-	-	FtsX,MacB_PCD
SRD3_k127_1694244_3	46429.BV95_02830	1.387e-90	316.0	COG1136@1|root,COG1136@2|Bacteria,1MU45@1224|Proteobacteria,2TS3W@28211|Alphaproteobacteria,2K3VI@204457|Sphingomonadales	204457|Sphingomonadales	V	ABC transporter	-	-	-	ko:K09810	ko02010,map02010	M00255	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.125	-	-	ABC_tran
SRD3_k127_1694244_0	1379701.JPJC01000170_gene890	3.823e-155	504.0	COG1668@1|root,COG1668@2|Bacteria,1R62N@1224|Proteobacteria,2U1RZ@28211|Alphaproteobacteria,2K9FR@204457|Sphingomonadales	204457|Sphingomonadales	CP	ABC-2 family transporter protein	-	-	-	-	-	-	-	-	-	-	-	-	ABC2_membrane_3
SRD3_k127_1694244_2	1379701.JPJC01000170_gene889	2.754e-123	404.0	COG4152@1|root,COG4152@2|Bacteria,1QUPV@1224|Proteobacteria,2TWB4@28211|Alphaproteobacteria,2K94J@204457|Sphingomonadales	204457|Sphingomonadales	S	AAA domain, putative AbiEii toxin, Type IV TA system	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran,DUF4162
SRD3_k127_1694244_4	1245469.S58_06500	2.418e-14	80.0	2BSZA@1|root,32N37@2|Bacteria,1RBPC@1224|Proteobacteria,2U6DZ@28211|Alphaproteobacteria,3JYGX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF805
SRD3_k127_169680_2	1449076.JOOE01000002_gene888	2.248e-27	116.0	2DPW6@1|root,333NE@2|Bacteria,1RKH2@1224|Proteobacteria,2UAYE@28211|Alphaproteobacteria,2K5NB@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_169680_0	392499.Swit_4609	1.005e-139	451.0	COG4948@1|root,COG4948@2|Bacteria,1MW76@1224|Proteobacteria,2TR16@28211|Alphaproteobacteria,2K34I@204457|Sphingomonadales	204457|Sphingomonadales	M	Mandelate racemase muconate lactonizing enzyme	-	-	5.1.1.20	ko:K19802	-	-	R10938	RC03309	ko00000,ko01000	-	-	-	MR_MLE_C,MR_MLE_N
SRD3_k127_169680_1	392499.Swit_4610	1.878e-81	276.0	COG1396@1|root,COG1917@1|root,COG1396@2|Bacteria,COG1917@2|Bacteria,1R6PS@1224|Proteobacteria,2TT0B@28211|Alphaproteobacteria,2KA90@204457|Sphingomonadales	204457|Sphingomonadales	K	Cro/C1-type HTH DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2,HTH_3
SRD3_k127_169680_3	317655.Sala_1463	4.722e-10	64.0	COG1629@1|root,COG4771@2|Bacteria,1MVFB@1224|Proteobacteria,2U2KS@28211|Alphaproteobacteria,2KDKA@204457|Sphingomonadales	204457|Sphingomonadales	P	TonB-dependent receptor plug	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SRD3_k127_1697895_5	627192.SLG_35110	5.136e-20	94.0	COG1530@1|root,COG1530@2|Bacteria,1RC15@1224|Proteobacteria,2U5PB@28211|Alphaproteobacteria,2K2AZ@204457|Sphingomonadales	204457|Sphingomonadales	J	ribonuclease E activity	-	-	-	-	-	-	-	-	-	-	-	-	RNase_E_G
SRD3_k127_1697895_3	1379701.JPJC01000226_gene2018	7.88e-88	293.0	COG0424@1|root,COG0424@2|Bacteria,1RH6H@1224|Proteobacteria,2TSS5@28211|Alphaproteobacteria,2K3WJ@204457|Sphingomonadales	204457|Sphingomonadales	D	Maf-like protein	maf	-	-	ko:K06287	-	-	-	-	ko00000	-	-	-	Maf
SRD3_k127_1697895_4	1112216.JH594425_gene1862	6.16e-40	149.0	COG0361@1|root,COG0361@2|Bacteria,1MZFU@1224|Proteobacteria,2UBRU@28211|Alphaproteobacteria,2K5VJ@204457|Sphingomonadales	204457|Sphingomonadales	J	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex	infA	-	-	ko:K02518	-	-	-	-	ko00000,ko03012	-	-	-	eIF-1a
SRD3_k127_1697895_1	1112212.JH584235_gene3227	9.069e-281	876.0	COG1506@1|root,COG1506@2|Bacteria,1MUJ3@1224|Proteobacteria,2TUZZ@28211|Alphaproteobacteria,2JZXS@204457|Sphingomonadales	204457|Sphingomonadales	E	COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S9
SRD3_k127_1697895_0	1112212.JH584235_gene3230	0.0	1100.0	COG3808@1|root,COG3808@2|Bacteria,1MUQ3@1224|Proteobacteria,2TR9G@28211|Alphaproteobacteria,2K0XA@204457|Sphingomonadales	204457|Sphingomonadales	C	Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force	hppA	-	3.6.1.1	ko:K15987	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	3.A.10.1	-	-	H_PPase
SRD3_k127_1697895_2	1470591.BW41_01354	2.825e-117	384.0	COG0611@1|root,COG0611@2|Bacteria,1MU9X@1224|Proteobacteria,2TTI6@28211|Alphaproteobacteria,2K0EU@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1	thiL	-	2.7.4.16	ko:K00946	ko00730,ko01100,map00730,map01100	M00127	R00617	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRS,AIRS_C
SRD3_k127_1705811_2	1449076.JOOE01000001_gene2264	2.693e-268	835.0	COG3669@1|root,COG3669@2|Bacteria,1PUG6@1224|Proteobacteria,2U4PE@28211|Alphaproteobacteria,2K0BC@204457|Sphingomonadales	204457|Sphingomonadales	G	Alpha-L-fucosidase	-	-	3.2.1.51	ko:K01206	ko00511,map00511	-	-	-	ko00000,ko00001,ko01000,ko04147	-	GH29	-	Alpha_L_fucos
SRD3_k127_1705811_1	1207055.C100_19575	1.42e-308	961.0	COG4447@1|root,COG4447@2|Bacteria,1MVMU@1224|Proteobacteria,2U98D@28211|Alphaproteobacteria,2K1A8@204457|Sphingomonadales	204457|Sphingomonadales	S	cellulose binding	-	-	-	-	-	-	-	-	-	-	-	-	BNR_6
SRD3_k127_1705811_3	1449076.JOOE01000002_gene961	1.467e-227	713.0	COG4948@1|root,COG4948@2|Bacteria,1MYZE@1224|Proteobacteria,2TUZU@28211|Alphaproteobacteria,2K3T9@204457|Sphingomonadales	204457|Sphingomonadales	M	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain	-	-	4.2.1.68	ko:K18334	ko00051,ko01120,map00051,map01120	-	R03688	RC00543	ko00000,ko00001,ko01000	-	-	-	MR_MLE_C,MR_MLE_N
SRD3_k127_1705811_8	1449076.JOOE01000002_gene958	1.142e-119	389.0	COG1414@1|root,COG1414@2|Bacteria,1RG7W@1224|Proteobacteria,2U7EM@28211|Alphaproteobacteria,2K284@204457|Sphingomonadales	204457|Sphingomonadales	K	helix_turn_helix isocitrate lyase regulation	-	-	-	-	-	-	-	-	-	-	-	-	HTH_IclR,IclR
SRD3_k127_1705811_0	69395.JQLZ01000001_gene3140	3.73e-318	1004.0	COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,1MV8W@1224|Proteobacteria,2U1IJ@28211|Alphaproteobacteria,2KIB8@204458|Caulobacterales	204458|Caulobacterales	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SRD3_k127_1705811_4	1449049.JONW01000008_gene333	3.631e-226	710.0	COG0654@1|root,COG0654@2|Bacteria,1NSGN@1224|Proteobacteria,2UPGQ@28211|Alphaproteobacteria	28211|Alphaproteobacteria	CH	Tryptophan halogenase	-	-	1.14.19.9	ko:K14266	ko00404,ko01130,map00404,map01130	M00789,M00790	R09570	RC00949	ko00000,ko00001,ko00002,ko01000	-	-	-	Trp_halogenase
SRD3_k127_1705811_7	685778.AORL01000010_gene2620	5.097e-123	401.0	COG2755@1|root,COG2755@2|Bacteria,1MZXI@1224|Proteobacteria,2UK9V@28211|Alphaproteobacteria,2K2JY@204457|Sphingomonadales	204457|Sphingomonadales	E	GDSL-like Lipase/Acylhydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
SRD3_k127_1705811_5	1549858.MC45_09805	1.299e-133	433.0	COG0657@1|root,COG0657@2|Bacteria,1N5QB@1224|Proteobacteria,2U1WU@28211|Alphaproteobacteria,2K1HS@204457|Sphingomonadales	204457|Sphingomonadales	I	alpha/beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3,Peptidase_S9
SRD3_k127_1705811_6	1207055.C100_22055	8.568e-126	415.0	COG0667@1|root,COG2721@1|root,COG0667@2|Bacteria,COG2721@2|Bacteria,1MWGQ@1224|Proteobacteria,2TUJ8@28211|Alphaproteobacteria,2K2G0@204457|Sphingomonadales	204457|Sphingomonadales	C	Aldo/keto reductase family	-	-	1.1.1.122	ko:K00064	ko00051,ko00053,ko01100,ko01110,ko01120,map00051,map00053,map01100,map01110,map01120	M00114	R07675,R08926	RC00066,RC00161	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldo_ket_red,SAF
SRD3_k127_1705811_9	1470591.BW41_03057	1.044e-107	353.0	COG1028@1|root,COG1028@2|Bacteria,1MURZ@1224|Proteobacteria,2TQJ6@28211|Alphaproteobacteria,2K2RN@204457|Sphingomonadales	204457|Sphingomonadales	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	ko:K18335	ko00051,ko01120,map00051,map01120	-	R10690	RC00089	ko00000,ko00001,ko01000	-	-	-	adh_short_C2
SRD3_k127_1723090_17	555793.WSK_3345	5.433e-74	257.0	COG3134@1|root,COG3134@2|Bacteria,1NPZS@1224|Proteobacteria,2UJEA@28211|Alphaproteobacteria,2K44Q@204457|Sphingomonadales	204457|Sphingomonadales	S	Glycine zipper 2TM domain	-	-	-	-	-	-	-	-	-	-	-	-	Rick_17kDa_Anti
SRD3_k127_1723090_6	1502852.FG94_00898	1.491e-189	613.0	COG4773@1|root,COG4773@2|Bacteria	2|Bacteria	P	Receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SRD3_k127_1723090_22	243090.RB11548	2.949e-22	112.0	2C3Y7@1|root,2ZE0R@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1723090_0	1449076.JOOE01000004_gene299	0.0	1289.0	COG0280@1|root,COG0281@1|root,COG0280@2|Bacteria,COG0281@2|Bacteria,1MU0A@1224|Proteobacteria,2TQJT@28211|Alphaproteobacteria,2JZY4@204457|Sphingomonadales	204457|Sphingomonadales	C	Malic enzyme	maeB	-	1.1.1.40	ko:K00029	ko00620,ko00710,ko01100,ko01120,ko01200,map00620,map00710,map01100,map01120,map01200	M00169,M00172	R00216	RC00105	ko00000,ko00001,ko00002,ko01000	-	-	-	Malic_M,PTA_PTB,malic
SRD3_k127_1723090_10	1112216.JH594425_gene1647	4.399e-147	474.0	COG1028@1|root,COG1028@2|Bacteria,1MVYJ@1224|Proteobacteria,2TRJ8@28211|Alphaproteobacteria,2K1AH@204457|Sphingomonadales	204457|Sphingomonadales	IQ	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	-	-	1.1.1.69	ko:K00046	-	-	-	-	ko00000,ko01000	-	-	-	adh_short_C2
SRD3_k127_1723090_3	1112214.AHIS01000007_gene301	7.792e-212	664.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TQKE@28211|Alphaproteobacteria,2K093@204457|Sphingomonadales	204457|Sphingomonadales	I	acyl-CoA dehydrogenase	-	-	-	ko:K06446	ko00930,ko01100,ko01120,map00930,map01100,map01120	-	R06943	RC00052	ko00000,ko00001,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SRD3_k127_1723090_13	1112212.JH584235_gene3181	6.979e-133	430.0	COG1028@1|root,COG1028@2|Bacteria,1R4GD@1224|Proteobacteria,2TVNF@28211|Alphaproteobacteria,2K2GT@204457|Sphingomonadales	204457|Sphingomonadales	IQ	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SRD3_k127_1723090_4	1090320.KB900605_gene1776	4.858e-201	642.0	COG2211@1|root,COG2211@2|Bacteria,1MVUM@1224|Proteobacteria,2TVI8@28211|Alphaproteobacteria,2K092@204457|Sphingomonadales	204457|Sphingomonadales	G	COG2211 Na melibiose symporter and related transporters	-	-	-	-	-	-	-	-	-	-	-	-	MFS_2
SRD3_k127_1723090_16	1112216.JH594425_gene1642	5.024e-80	270.0	COG3942@1|root,COG3942@2|Bacteria,1N0K8@1224|Proteobacteria,2UDGN@28211|Alphaproteobacteria,2K5G2@204457|Sphingomonadales	204457|Sphingomonadales	S	CHAP domain	-	-	-	-	-	-	-	-	-	-	-	-	CHAP
SRD3_k127_1723090_14	1112214.AHIS01000007_gene304	1.131e-86	291.0	COG0229@1|root,COG0229@2|Bacteria,1RGWC@1224|Proteobacteria,2U70T@28211|Alphaproteobacteria,2K4P6@204457|Sphingomonadales	204457|Sphingomonadales	O	conserved domain frequently associated with peptide methionine sulfoxide reductase	-	-	1.8.4.12	ko:K07305	-	-	-	-	ko00000,ko01000	-	-	-	SelR
SRD3_k127_1723090_19	1112214.AHIS01000007_gene305	4.915e-48	174.0	2FBS2@1|root,343WV@2|Bacteria,1NAP6@1224|Proteobacteria,2UG4Q@28211|Alphaproteobacteria,2K7HD@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1723090_2	1112214.AHIS01000007_gene306	3.79e-250	774.0	COG2124@1|root,COG2124@2|Bacteria,1MV8Q@1224|Proteobacteria,2TRWW@28211|Alphaproteobacteria,2K1ZZ@204457|Sphingomonadales	204457|Sphingomonadales	Q	cytochrome P450	-	-	-	-	-	-	-	-	-	-	-	-	p450
SRD3_k127_1723090_8	1112214.AHIS01000007_gene307	2.492e-164	529.0	COG1668@1|root,COG1668@2|Bacteria,1R62N@1224|Proteobacteria,2U1RZ@28211|Alphaproteobacteria,2KCG4@204457|Sphingomonadales	204457|Sphingomonadales	CP	ABC-2 family transporter protein	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_3
SRD3_k127_1723090_9	1112212.JH584235_gene3189	6.461e-161	511.0	COG4152@1|root,COG4152@2|Bacteria,1QUPV@1224|Proteobacteria,2TWB4@28211|Alphaproteobacteria,2KCPS@204457|Sphingomonadales	204457|Sphingomonadales	S	AAA domain, putative AbiEii toxin, Type IV TA system	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
SRD3_k127_1723090_5	1081640.AGFU01000026_gene2654	6.098e-190	598.0	COG1600@1|root,COG1600@2|Bacteria,1MV1H@1224|Proteobacteria,2TR5E@28211|Alphaproteobacteria,2K0HW@204457|Sphingomonadales	204457|Sphingomonadales	C	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)	queG	-	1.17.99.6	ko:K18979	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	DUF1730,Fer4_16
SRD3_k127_1723090_21	1112212.JH584235_gene3191	7.421e-37	145.0	2EHHR@1|root,33B9P@2|Bacteria,1NGHW@1224|Proteobacteria,2UJVS@28211|Alphaproteobacteria,2K6SJ@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1723090_15	1112216.JH594425_gene1654	3.791e-80	273.0	COG2981@1|root,COG2981@2|Bacteria,1MWAA@1224|Proteobacteria,2TT6E@28211|Alphaproteobacteria,2K1BQ@204457|Sphingomonadales	204457|Sphingomonadales	E	protein involved in cysteine biosynthesis	-	-	-	ko:K06203	-	-	-	-	ko00000	-	-	-	EI24
SRD3_k127_1723090_7	1112214.AHIS01000007_gene312	5.991e-168	534.0	COG0524@1|root,COG0524@2|Bacteria,1MUUC@1224|Proteobacteria,2TS9D@28211|Alphaproteobacteria,2K0DX@204457|Sphingomonadales	204457|Sphingomonadales	G	Carbohydrate kinase	-	-	-	-	-	-	-	-	-	-	-	-	PfkB
SRD3_k127_1723090_1	1090320.KB900605_gene2079	3.943e-273	847.0	COG0531@1|root,COG0531@2|Bacteria,1MXNJ@1224|Proteobacteria,2TRNX@28211|Alphaproteobacteria,2K03C@204457|Sphingomonadales	204457|Sphingomonadales	E	amino acid	-	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease_2
SRD3_k127_1723090_18	745310.G432_10445	7.948e-69	234.0	COG0537@1|root,COG0537@2|Bacteria,1RDCJ@1224|Proteobacteria,2U956@28211|Alphaproteobacteria,2K4G2@204457|Sphingomonadales	204457|Sphingomonadales	FG	COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases	-	-	-	-	-	-	-	-	-	-	-	-	HIT
SRD3_k127_1723090_20	1112214.AHIS01000009_gene146	4.614e-40	154.0	COG0140@1|root,COG0140@2|Bacteria,1MZEE@1224|Proteobacteria,2UBU3@28211|Alphaproteobacteria,2K5ZV@204457|Sphingomonadales	204457|Sphingomonadales	E	Phosphoribosyl-ATP	hisE	-	3.6.1.31	ko:K01523	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04035	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	PRA-PH
SRD3_k127_1723090_23	1112214.AHIS01000009_gene147	9.283e-21	93.0	2BMDX@1|root,32FYD@2|Bacteria,1Q89M@1224|Proteobacteria,2VEFH@28211|Alphaproteobacteria,2K7S7@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1723090_11	1090319.KE386571_gene1967	1.176e-142	455.0	COG0107@1|root,COG0107@2|Bacteria,1MUS0@1224|Proteobacteria,2TQXD@28211|Alphaproteobacteria,2K1KV@204457|Sphingomonadales	204457|Sphingomonadales	E	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit	hisF	-	-	ko:K02500	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04558	RC00010,RC01190,RC01943	ko00000,ko00001,ko00002,ko01000	-	-	-	His_biosynth
SRD3_k127_1723090_12	1112214.AHIS01000009_gene149	5.584e-136	435.0	COG0106@1|root,COG0106@2|Bacteria,1MW6S@1224|Proteobacteria,2TRSG@28211|Alphaproteobacteria,2K0CJ@204457|Sphingomonadales	204457|Sphingomonadales	E	1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase	hisA	-	5.3.1.16	ko:K01814	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04640	RC00945	ko00000,ko00001,ko00002,ko01000	-	-	-	His_biosynth
SRD3_k127_1727941_0	402777.KB235903_gene1618	1.21e-149	483.0	COG0463@1|root,COG0463@2|Bacteria,1G4BG@1117|Cyanobacteria,1H8D9@1150|Oscillatoriales	1117|Cyanobacteria	M	PFAM Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
SRD3_k127_1731929_4	246196.MSMEI_1397	2.185e-29	123.0	COG4319@1|root,COG4319@2|Bacteria,2IRNE@201174|Actinobacteria,23A7R@1762|Mycobacteriaceae	201174|Actinobacteria	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_2
SRD3_k127_1731929_2	136993.KB900626_gene2241	1.491e-32	130.0	COG3668@1|root,COG3668@2|Bacteria,1N105@1224|Proteobacteria,2UHT8@28211|Alphaproteobacteria,37139@31993|Methylocystaceae	28211|Alphaproteobacteria	S	ParE toxin of type II toxin-antitoxin system, parDE	-	-	-	-	-	-	-	-	-	-	-	-	ParE_toxin
SRD3_k127_1731929_3	46429.BV95_03911	1.951e-30	122.0	COG3609@1|root,COG3609@2|Bacteria,1N05M@1224|Proteobacteria,2UDPI@28211|Alphaproteobacteria,2K54D@204457|Sphingomonadales	204457|Sphingomonadales	K	CopG family transcripitonal regulator	-	-	-	-	-	-	-	-	-	-	-	-	ParD_antitoxin
SRD3_k127_1731929_1	627192.SLG_31980	1.108e-43	163.0	COG5478@1|root,COG5478@2|Bacteria,1MZMZ@1224|Proteobacteria,2UBR2@28211|Alphaproteobacteria,2K5A3@204457|Sphingomonadales	204457|Sphingomonadales	S	small integral membrane protein	-	-	-	-	-	-	-	-	-	-	-	-	Iron_permease
SRD3_k127_1731929_0	1331060.RLDS_20630	1.251e-151	488.0	COG3943@1|root,COG3943@2|Bacteria,1MWKW@1224|Proteobacteria,2TU1T@28211|Alphaproteobacteria,2K3TC@204457|Sphingomonadales	204457|Sphingomonadales	S	Virulence protein RhuM family	-	-	-	-	-	-	-	-	-	-	-	-	Virulence_RhuM
SRD3_k127_1731929_5	69279.BG36_01505	1.161e-28	116.0	COG3153@1|root,COG3153@2|Bacteria,1QUSG@1224|Proteobacteria,2U5S1@28211|Alphaproteobacteria,43P7V@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	S	Acetyltransferase (GNAT) family	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_7
SRD3_k127_1732851_5	1112212.JH584235_gene623	2.55e-119	387.0	COG2887@1|root,COG3893@1|root,COG2887@2|Bacteria,COG3893@2|Bacteria,1MY2G@1224|Proteobacteria,2TS74@28211|Alphaproteobacteria,2K06P@204457|Sphingomonadales	204457|Sphingomonadales	L	helicase	addB	-	3.6.4.12	ko:K16899	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	PDDEXK_1
SRD3_k127_1732851_0	1112214.AHIS01000086_gene350	0.0	1628.0	COG1074@1|root,COG1074@2|Bacteria,1MUTF@1224|Proteobacteria,2TQJZ@28211|Alphaproteobacteria,2K07I@204457|Sphingomonadales	204457|Sphingomonadales	L	Belongs to the helicase family. UvrD subfamily	addA	-	3.6.4.12	ko:K16898	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	PDDEXK_1,UvrD-helicase,UvrD_C
SRD3_k127_1732851_8	1112214.AHIS01000086_gene351	2.013e-59	207.0	COG3118@1|root,COG3118@2|Bacteria,1MZBB@1224|Proteobacteria,2UCCR@28211|Alphaproteobacteria,2K589@204457|Sphingomonadales	204457|Sphingomonadales	O	Belongs to the thioredoxin family	trxA	-	-	ko:K03671	ko04621,ko05418,map04621,map05418	-	-	-	ko00000,ko00001,ko03110	-	-	-	Thioredoxin
SRD3_k127_1732851_13	291985.CCSI01000006_gene1232	9.541e-15	81.0	2E8HV@1|root,2ZM2W@2|Bacteria,1PPS2@1224|Proteobacteria,2V276@28211|Alphaproteobacteria,2KAPI@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1732851_12	114615.BRADO5997	1.829e-22	101.0	COG3012@1|root,COG3012@2|Bacteria,1NGS9@1224|Proteobacteria,2UJIM@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	SEC-C motif	-	-	-	-	-	-	-	-	-	-	-	-	SEC-C
SRD3_k127_1732851_10	1449076.JOOE01000001_gene2026	4.805e-40	158.0	2DB8C@1|root,2Z7R9@2|Bacteria,1RKGP@1224|Proteobacteria,2UAT8@28211|Alphaproteobacteria,2K5ID@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1732851_3	1112212.JH584235_gene619	1.71e-214	673.0	COG1364@1|root,COG1364@2|Bacteria,1MU0T@1224|Proteobacteria,2TS98@28211|Alphaproteobacteria,2K035@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate	argJ	-	2.3.1.1,2.3.1.35	ko:K00620	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	M00028	R00259,R02282	RC00004,RC00064	ko00000,ko00001,ko00002,ko01000	-	-	-	ArgJ
SRD3_k127_1732851_6	685778.AORL01000019_gene1835	3.157e-98	325.0	COG0745@1|root,COG0745@2|Bacteria,1PDAM@1224|Proteobacteria,2UPHY@28211|Alphaproteobacteria,2K1UM@204457|Sphingomonadales	204457|Sphingomonadales	T	Transcriptional regulatory protein, C terminal	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
SRD3_k127_1732851_4	1112212.JH584235_gene1034	5.259e-123	409.0	COG0642@1|root,COG2205@2|Bacteria,1MW8M@1224|Proteobacteria,2TSD2@28211|Alphaproteobacteria,2K009@204457|Sphingomonadales	204457|Sphingomonadales	T	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c
SRD3_k127_1732851_11	1112214.AHIS01000056_gene2973	3.706e-35	142.0	COG0745@1|root,COG0745@2|Bacteria,1NR1M@1224|Proteobacteria,2UR4I@28211|Alphaproteobacteria,2K03A@204457|Sphingomonadales	204457|Sphingomonadales	T	PFAM response regulator receiver	-	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
SRD3_k127_1732851_2	1112212.JH584235_gene3216	0.0	1173.0	COG4773@1|root,COG4773@2|Bacteria,1QTXJ@1224|Proteobacteria,2UNSU@28211|Alphaproteobacteria,2K17K@204457|Sphingomonadales	204457|Sphingomonadales	P	receptor	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SRD3_k127_1732851_14	1112216.JH594425_gene3248	1.573e-07	57.0	2C33Q@1|root,2ZZJN@2|Bacteria,1PP26@1224|Proteobacteria,2V1KC@28211|Alphaproteobacteria,2KBPJ@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1732851_1	1112214.AHIS01000086_gene358	0.0	1581.0	COG0653@1|root,COG0653@2|Bacteria,1MUJZ@1224|Proteobacteria,2TTBF@28211|Alphaproteobacteria,2K1MX@204457|Sphingomonadales	204457|Sphingomonadales	U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane	secA	-	-	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4	-	-	SEC-C,SecA_DEAD,SecA_PP_bind,SecA_SW
SRD3_k127_1732851_7	1112216.JH594425_gene3246	6.002e-86	293.0	2A23N@1|root,30QDW@2|Bacteria,1RGGT@1224|Proteobacteria,2U84G@28211|Alphaproteobacteria,2K321@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1732851_9	1550073.JROH01000007_gene1865	9.301e-50	179.0	COG4704@1|root,COG4704@2|Bacteria,1RITF@1224|Proteobacteria,2UAIQ@28211|Alphaproteobacteria,2K5C0@204457|Sphingomonadales	204457|Sphingomonadales	S	Uncharacterized protein conserved in bacteria (DUF2141)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2141
SRD3_k127_1733742_3	1112212.JH584235_gene1945	4.681e-191	598.0	COG0821@1|root,COG0821@2|Bacteria,1MUAX@1224|Proteobacteria,2TQSI@28211|Alphaproteobacteria,2K1FA@204457|Sphingomonadales	204457|Sphingomonadales	I	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate	ispG	-	1.17.7.1,1.17.7.3	ko:K03526	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R08689,R10859	RC01486	ko00000,ko00001,ko00002,ko01000	-	-	-	GcpE
SRD3_k127_1733742_10	1449076.JOOE01000004_gene463	7.78e-43	162.0	COG3577@1|root,COG3577@2|Bacteria,1MZCI@1224|Proteobacteria,2U9K2@28211|Alphaproteobacteria,2K6WM@204457|Sphingomonadales	204457|Sphingomonadales	S	gag-polyprotein putative aspartyl protease	-	-	-	ko:K06985	ko04112,map04112	-	-	-	ko00000,ko00001	-	-	-	gag-asp_proteas
SRD3_k127_1733742_6	745310.G432_08300	5.161e-98	329.0	COG0697@1|root,COG0697@2|Bacteria,1RC7K@1224|Proteobacteria,2U0HX@28211|Alphaproteobacteria,2KDGS@204457|Sphingomonadales	204457|Sphingomonadales	EG	EamA-like transporter family	-	-	-	ko:K15270	-	-	-	-	ko00000,ko02000	2.A.7.3.7	-	-	EamA
SRD3_k127_1733742_7	1112214.AHIS01000042_gene3104	5.675e-72	252.0	COG0454@1|root,COG0456@2|Bacteria,1RCYQ@1224|Proteobacteria,2TW76@28211|Alphaproteobacteria,2K4MG@204457|Sphingomonadales	204457|Sphingomonadales	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
SRD3_k127_1733742_8	629773.AORY01000002_gene1719	1.572e-45	172.0	COG2076@1|root,COG2076@2|Bacteria,1MZ6P@1224|Proteobacteria,2UBR4@28211|Alphaproteobacteria,2K583@204457|Sphingomonadales	204457|Sphingomonadales	P	Small Multidrug Resistance protein	-	-	-	ko:K11741	-	-	-	-	ko00000,ko02000	2.A.7.1	-	-	Multi_Drug_Res
SRD3_k127_1733742_9	1112214.AHIS01000042_gene3103	1.612e-45	176.0	COG3070@1|root,COG3070@2|Bacteria,1Q55Z@1224|Proteobacteria,2VBJF@28211|Alphaproteobacteria,2K64C@204457|Sphingomonadales	204457|Sphingomonadales	K	TfoX N-terminal domain	-	-	-	ko:K07343	-	-	-	-	ko00000	-	-	-	TfoX_N
SRD3_k127_1733742_5	194867.ALBQ01000044_gene1441	4.569e-102	334.0	COG0221@1|root,COG0221@2|Bacteria,1RA2F@1224|Proteobacteria,2TQZM@28211|Alphaproteobacteria,2K19Z@204457|Sphingomonadales	204457|Sphingomonadales	C	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions	ppa	-	3.6.1.1	ko:K01507	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	-	-	-	Pyrophosphatase
SRD3_k127_1733742_2	1112212.JH584235_gene2746	3.158e-208	664.0	COG3975@1|root,COG3975@2|Bacteria,1MUHZ@1224|Proteobacteria,2TRZF@28211|Alphaproteobacteria,2K0CU@204457|Sphingomonadales	204457|Sphingomonadales	S	protease with the C-terminal PDZ	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M61
SRD3_k127_1733742_1	1112212.JH584235_gene2746	0.0	1073.0	COG3975@1|root,COG3975@2|Bacteria,1MUHZ@1224|Proteobacteria,2TRZF@28211|Alphaproteobacteria,2K0CU@204457|Sphingomonadales	204457|Sphingomonadales	S	protease with the C-terminal PDZ	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M61
SRD3_k127_1733742_0	1122612.AUBA01000007_gene1040	0.0	1434.0	COG1020@1|root,COG1020@2|Bacteria,1QK4F@1224|Proteobacteria,2TRUN@28211|Alphaproteobacteria,2K2X8@204457|Sphingomonadales	204457|Sphingomonadales	Q	Phosphopantetheine attachment site	-	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C,Hexapep_2,PP-binding
SRD3_k127_1733742_4	1081640.AGFU01000055_gene177	8.217e-108	359.0	COG0681@1|root,COG0681@2|Bacteria,1MXUF@1224|Proteobacteria,2TR9N@28211|Alphaproteobacteria,2K1V9@204457|Sphingomonadales	204457|Sphingomonadales	U	Belongs to the peptidase S26 family	-	-	3.4.21.89	ko:K03100	ko02024,ko03060,map02024,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S24
SRD3_k127_1733742_11	366602.Caul_3417	2.006e-27	117.0	2DMPI@1|root,32SWD@2|Bacteria,1N2B7@1224|Proteobacteria,2UDY6@28211|Alphaproteobacteria,2KJBN@204458|Caulobacterales	204458|Caulobacterales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	EF-hand_5
SRD3_k127_1766310_3	1112214.AHIS01000056_gene3007	1.893e-66	229.0	COG1565@1|root,COG1565@2|Bacteria,1N3CJ@1224|Proteobacteria,2TRHW@28211|Alphaproteobacteria,2K21E@204457|Sphingomonadales	204457|Sphingomonadales	M	Putative S-adenosyl-L-methionine-dependent methyltransferase	-	-	-	ko:K18164	ko04714,map04714	-	-	-	ko00000,ko00001,ko03029	-	-	-	Methyltransf_28
SRD3_k127_1766310_2	1112216.JH594425_gene1119	1.363e-91	308.0	COG0454@1|root,COG0456@2|Bacteria,1MZA6@1224|Proteobacteria,2UCC0@28211|Alphaproteobacteria,2K4CY@204457|Sphingomonadales	204457|Sphingomonadales	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10
SRD3_k127_1766310_1	1449076.JOOE01000003_gene3123	5.231e-114	379.0	COG1496@1|root,COG1496@2|Bacteria,1MW2H@1224|Proteobacteria,2TTXU@28211|Alphaproteobacteria,2K13X@204457|Sphingomonadales	204457|Sphingomonadales	S	Belongs to the multicopper oxidase YfiH RL5 family	-	-	-	ko:K05810	-	-	-	-	ko00000,ko01000	-	-	-	Cu-oxidase_4
SRD3_k127_1766310_0	1112212.JH584235_gene2929	6.824e-121	397.0	COG0626@1|root,COG0626@2|Bacteria,1MU57@1224|Proteobacteria,2TW14@28211|Alphaproteobacteria,2K1W3@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine	-	-	4.4.1.11	ko:K01761	ko00270,ko00450,map00270,map00450	-	R00654,R04770	RC00196,RC00348,RC01209,RC01210	ko00000,ko00001,ko01000	-	-	-	Cys_Met_Meta_PP
SRD3_k127_1780386_0	194867.ALBQ01000032_gene988	4.104e-179	573.0	COG1629@1|root,COG1629@2|Bacteria,1MV8W@1224|Proteobacteria,2U0EP@28211|Alphaproteobacteria,2K0UB@204457|Sphingomonadales	204457|Sphingomonadales	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SRD3_k127_1780386_1	1037409.BJ6T_51980	1.17e-70	247.0	COG0693@1|root,COG0693@2|Bacteria,1N8N6@1224|Proteobacteria,2TT0U@28211|Alphaproteobacteria,3K15G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	DJ-1/PfpI family	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI
SRD3_k127_1780386_2	1112214.AHIS01000095_gene671	5.676e-36	145.0	2AM8C@1|root,31C36@2|Bacteria,1Q81F@1224|Proteobacteria,2VE75@28211|Alphaproteobacteria,2K73X@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF1488)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1488
SRD3_k127_1780386_3	1470591.BW41_02757	0.0001665	45.0	COG0558@1|root,COG0558@2|Bacteria,1N5KT@1224|Proteobacteria,2UEHB@28211|Alphaproteobacteria,2KDKU@204457|Sphingomonadales	204457|Sphingomonadales	I	CDP-alcohol phosphatidyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	CDP-OH_P_transf
SRD3_k127_1806413_1	158500.BV97_05450	1.277e-93	313.0	COG1813@1|root,COG1813@2|Bacteria,1MXA5@1224|Proteobacteria,2TU2N@28211|Alphaproteobacteria,2K8PS@204457|Sphingomonadales	204457|Sphingomonadales	K	Xre family transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_3,HTH_31
SRD3_k127_1806413_0	158500.BV97_05451	3.376e-136	441.0	COG2304@1|root,COG2304@2|Bacteria,1MW8K@1224|Proteobacteria,2TV9Y@28211|Alphaproteobacteria,2K8G2@204457|Sphingomonadales	204457|Sphingomonadales	S	Vault protein inter-alpha-trypsin domain	-	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	VIT,VWA_3
SRD3_k127_1856045_2	1112212.JH584235_gene800	5.785e-111	361.0	COG2072@1|root,COG2072@2|Bacteria,1MU71@1224|Proteobacteria,2TV2E@28211|Alphaproteobacteria,2JZVQ@204457|Sphingomonadales	204457|Sphingomonadales	P	Flavin-binding monooxygenase-like	-	-	-	-	-	-	-	-	-	-	-	-	FMO-like,NAD_binding_8,Pyr_redox_3
SRD3_k127_1856045_3	1112216.JH594425_gene3415	6.757e-77	262.0	COG1309@1|root,COG1309@2|Bacteria,1NDME@1224|Proteobacteria,2UA4U@28211|Alphaproteobacteria,2KCRP@204457|Sphingomonadales	204457|Sphingomonadales	K	Domain of unknown function (DUF1956)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1956,TetR_N
SRD3_k127_1856045_1	1112214.AHIS01000086_gene436	3.073e-162	523.0	COG1566@1|root,COG1566@2|Bacteria,1MU7I@1224|Proteobacteria,2TS39@28211|Alphaproteobacteria,2K1NK@204457|Sphingomonadales	204457|Sphingomonadales	V	Multidrug resistance efflux pump	-	-	-	-	-	-	-	-	-	-	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
SRD3_k127_1856045_0	1112216.JH594425_gene3413	7.232e-272	845.0	COG0477@1|root,COG0477@2|Bacteria,1RGPN@1224|Proteobacteria,2TQKW@28211|Alphaproteobacteria,2KEDQ@204457|Sphingomonadales	204457|Sphingomonadales	EGP	Major Facilitator Superfamily	-	-	-	ko:K03446	-	M00701	-	-	ko00000,ko00002,ko02000	2.A.1.3	-	-	MFS_1
SRD3_k127_1856045_4	1112214.AHIS01000086_gene438	4.663e-26	113.0	COG1538@1|root,COG1538@2|Bacteria,1MUA8@1224|Proteobacteria,2TSN8@28211|Alphaproteobacteria,2K0XN@204457|Sphingomonadales	204457|Sphingomonadales	MU	COG1538 Outer membrane protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
SRD3_k127_1865122_1	1112214.AHIS01000094_gene610	9.994e-66	227.0	COG1538@1|root,COG1538@2|Bacteria,1MUA8@1224|Proteobacteria,2TUFK@28211|Alphaproteobacteria,2K0NW@204457|Sphingomonadales	204457|Sphingomonadales	M	RND efflux system, outer membrane lipoprotein	-	-	-	ko:K18139	ko01501,ko02024,map01501,map02024	M00642,M00643,M00647,M00718,M00768,M00822	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	1.B.17,2.A.6.2	-	-	OEP
SRD3_k127_1865122_0	1112214.AHIS01000094_gene611	4.252e-84	281.0	COG1247@1|root,COG1247@2|Bacteria,1R6UW@1224|Proteobacteria,2U09H@28211|Alphaproteobacteria,2K4C8@204457|Sphingomonadales	204457|Sphingomonadales	M	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
SRD3_k127_1865122_6	1112214.AHIS01000094_gene612	2.883e-35	139.0	2BK3V@1|root,32EHC@2|Bacteria,1Q86H@1224|Proteobacteria,2U7SN@28211|Alphaproteobacteria,2K5E5@204457|Sphingomonadales	204457|Sphingomonadales	S	Phasin protein	-	-	-	-	-	-	-	-	-	-	-	-	Phasin_2
SRD3_k127_1865122_2	1112212.JH584235_gene3734	8.681e-62	228.0	COG5542@1|root,COG5542@2|Bacteria	2|Bacteria	O	integral membrane protein	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1865122_3	1112212.JH584235_gene3733	5.321e-56	200.0	COG1664@1|root,COG1664@2|Bacteria,1MZN0@1224|Proteobacteria,2U5DW@28211|Alphaproteobacteria,2K66W@204457|Sphingomonadales	204457|Sphingomonadales	M	Integral membrane protein CcmA involved in cell shape determination	-	-	-	-	-	-	-	-	-	-	-	-	Bactofilin
SRD3_k127_1865122_5	1219035.NT2_06_01830	1.477e-35	140.0	COG5331@1|root,COG5331@2|Bacteria	2|Bacteria	S	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	MAPEG
SRD3_k127_1865122_4	1434929.X946_2813	8.49e-41	161.0	COG3791@1|root,COG3791@2|Bacteria,1PSHK@1224|Proteobacteria,2WA8H@28216|Betaproteobacteria,1KA4R@119060|Burkholderiaceae	28216|Betaproteobacteria	S	Glutathione-dependent formaldehyde-activating enzyme	-	-	-	-	-	-	-	-	-	-	-	-	GFA
SRD3_k127_1871002_0	1081640.AGFU01000057_gene120	3.848e-272	853.0	COG1298@1|root,COG1298@2|Bacteria,1MUF3@1224|Proteobacteria,2TQUR@28211|Alphaproteobacteria,2K3FZ@204457|Sphingomonadales	204457|Sphingomonadales	NU	FHIPEP family	-	-	-	-	-	-	-	-	-	-	-	-	FHIPEP
SRD3_k127_1871002_1	1090319.KE386571_gene3164	6.54e-122	400.0	COG1377@1|root,COG1377@2|Bacteria,1QY4U@1224|Proteobacteria,2TXFI@28211|Alphaproteobacteria,2K2N7@204457|Sphingomonadales	204457|Sphingomonadales	NU	FlhB HrpN YscU SpaS Family	-	-	-	ko:K02401	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2	-	-	Bac_export_2
SRD3_k127_1871002_2	1081640.AGFU01000057_gene118	2.377e-87	296.0	COG1684@1|root,COG1684@2|Bacteria,1N8W9@1224|Proteobacteria,2URHH@28211|Alphaproteobacteria,2K4PH@204457|Sphingomonadales	204457|Sphingomonadales	NU	Bacterial export proteins, family 1	-	-	-	ko:K02421	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2	-	-	Bac_export_1
SRD3_k127_1871002_4	1090319.KE386571_gene3166	6.068e-34	134.0	COG1987@1|root,COG1987@2|Bacteria,1Q7WQ@1224|Proteobacteria,2UUPD@28211|Alphaproteobacteria	28211|Alphaproteobacteria	NU	Bacterial export proteins, family 3	-	-	-	-	-	-	-	-	-	-	-	-	Bac_export_3
SRD3_k127_1871002_5	498211.CJA_0828	3.103e-29	128.0	COG3209@1|root,COG3209@2|Bacteria,1MVV1@1224|Proteobacteria,1RSE7@1236|Gammaproteobacteria,1FG5F@10|Cellvibrio	1236|Gammaproteobacteria	M	TIGRFAM YD repeat protein	-	-	-	-	-	-	-	-	-	-	-	-	RHS,RHS_repeat
SRD3_k127_1871002_3	1219049.SP5_030_00160	1.602e-35	139.0	COG4227@1|root,COG4227@2|Bacteria,1MU8I@1224|Proteobacteria,2TRIT@28211|Alphaproteobacteria,2K1FU@204457|Sphingomonadales	204457|Sphingomonadales	L	Domain of unknown function (DUF1738)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1738
SRD3_k127_1884257_2	1112216.JH594425_gene2289	3.758e-36	138.0	COG0218@1|root,COG0218@2|Bacteria,1MY3Z@1224|Proteobacteria,2U5E5@28211|Alphaproteobacteria,2K0SN@204457|Sphingomonadales	204457|Sphingomonadales	D	Necessary for normal cell division and for the maintenance of normal septation	engB	-	-	ko:K03978	-	-	-	-	ko00000,ko03036	-	-	-	MMR_HSR1
SRD3_k127_1884257_0	1112216.JH594425_gene2290	9.852e-258	806.0	COG0706@1|root,COG0706@2|Bacteria,1MV5M@1224|Proteobacteria,2TSTJ@28211|Alphaproteobacteria,2K1E1@204457|Sphingomonadales	204457|Sphingomonadales	U	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins	yidC	-	-	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044,ko03029	2.A.9	-	-	60KD_IMP,YidC_periplas
SRD3_k127_1884257_3	1090320.KB900605_gene3217	1.044e-32	129.0	COG0759@1|root,COG0759@2|Bacteria,1N6U4@1224|Proteobacteria,2UFKH@28211|Alphaproteobacteria,2K6W4@204457|Sphingomonadales	204457|Sphingomonadales	S	Could be involved in insertion of integral membrane proteins into the membrane	-	-	-	ko:K08998	-	-	-	-	ko00000	-	-	-	Haemolytic
SRD3_k127_1884257_1	1112212.JH584235_gene3477	3.105e-53	189.0	COG0594@1|root,COG0594@2|Bacteria,1N6QY@1224|Proteobacteria,2UFAB@28211|Alphaproteobacteria,2K5Y4@204457|Sphingomonadales	204457|Sphingomonadales	J	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme	rnpA	-	3.1.26.5	ko:K03536	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Ribonuclease_P
SRD3_k127_1890939_22	1090318.ATTI01000001_gene110	4.547e-85	286.0	COG0625@1|root,COG0625@2|Bacteria,1MY47@1224|Proteobacteria,2TVGA@28211|Alphaproteobacteria,2K3KU@204457|Sphingomonadales	204457|Sphingomonadales	O	Glutathione S-transferase, N-terminal domain	bphK	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_2,GST_N,GST_N_3
SRD3_k127_1890939_20	1112216.JH594425_gene3534	2.065e-107	368.0	COG1287@1|root,COG1287@2|Bacteria,1RFFI@1224|Proteobacteria,2UQZD@28211|Alphaproteobacteria,2K94B@204457|Sphingomonadales	204457|Sphingomonadales	S	oligosaccharyl transferase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1890939_2	1112212.JH584235_gene1654	7.706e-320	989.0	COG1164@1|root,COG1164@2|Bacteria,1MXAC@1224|Proteobacteria,2TRPY@28211|Alphaproteobacteria,2K1Z8@204457|Sphingomonadales	204457|Sphingomonadales	E	Oligopeptidase F	-	-	-	ko:K08602	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M3,Peptidase_M3_N
SRD3_k127_1890939_18	1408419.JHYG01000005_gene587	2.14e-115	379.0	COG0454@1|root,COG1846@1|root,COG0456@2|Bacteria,COG1846@2|Bacteria,1Q5AK@1224|Proteobacteria,2TUP8@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	Transcriptional	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,MarR,MarR_2
SRD3_k127_1890939_12	1470591.BW41_01509	3.468e-164	524.0	COG0836@1|root,COG0836@2|Bacteria,1MV39@1224|Proteobacteria,2TT0R@28211|Alphaproteobacteria,2K066@204457|Sphingomonadales	204457|Sphingomonadales	M	Mannose-1-phosphate guanylyltransferase	-	-	2.7.7.13	ko:K00971	ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110	M00114,M00361,M00362	R00885	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	MannoseP_isomer,NTP_transferase
SRD3_k127_1890939_8	1112212.JH584235_gene1657	3.793e-251	779.0	COG2148@1|root,COG2148@2|Bacteria,1MV6W@1224|Proteobacteria,2TRZA@28211|Alphaproteobacteria,2K0H7@204457|Sphingomonadales	204457|Sphingomonadales	M	sugar transferase	-	-	-	-	-	-	-	-	-	-	-	-	Bac_transf,CoA_binding_3
SRD3_k127_1890939_5	1112212.JH584235_gene1658	2.407e-288	900.0	COG4251@1|root,COG4251@2|Bacteria,1QUMQ@1224|Proteobacteria,2U18E@28211|Alphaproteobacteria,2K1YZ@204457|Sphingomonadales	204457|Sphingomonadales	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,GAF_3,HATPase_c
SRD3_k127_1890939_9	1449076.JOOE01000003_gene3187	2.326e-232	726.0	COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,2TQPG@28211|Alphaproteobacteria,2K0MW@204457|Sphingomonadales	204457|Sphingomonadales	T	Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	-	-	-	ko:K02481	-	-	-	-	ko00000,ko02022	-	-	-	HTH_8,Response_reg,Sigma54_activat
SRD3_k127_1890939_4	1112212.JH584235_gene1660	1.36e-292	914.0	COG0457@1|root,COG0457@2|Bacteria,1PDUB@1224|Proteobacteria,2TTYN@28211|Alphaproteobacteria,2K0P8@204457|Sphingomonadales	204457|Sphingomonadales	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_19,TPR_21
SRD3_k127_1890939_17	1112212.JH584235_gene1661	3.752e-123	407.0	COG2607@1|root,COG2607@2|Bacteria,1MVMX@1224|Proteobacteria,2TTFE@28211|Alphaproteobacteria,2K28Z@204457|Sphingomonadales	204457|Sphingomonadales	P	ATPase (AAA superfamily)	-	-	-	ko:K06923	-	-	-	-	ko00000	-	-	-	DUF815
SRD3_k127_1890939_21	1470591.BW41_01515	1.362e-95	323.0	COG3920@1|root,COG3920@2|Bacteria,1MVPJ@1224|Proteobacteria,2TSSQ@28211|Alphaproteobacteria,2KDTW@204457|Sphingomonadales	204457|Sphingomonadales	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HATPase_c_2,HisKA_2,PAS_4
SRD3_k127_1890939_3	1112212.JH584235_gene1662	8.363e-313	965.0	COG0488@1|root,COG0488@2|Bacteria,1MU37@1224|Proteobacteria,2TR3X@28211|Alphaproteobacteria,2K0QQ@204457|Sphingomonadales	204457|Sphingomonadales	S	of ABC transporters with duplicated ATPase	-	-	-	ko:K15738	-	-	-	-	ko00000,ko02000	3.A.1.120.6	-	-	ABC_tran,ABC_tran_CTD
SRD3_k127_1890939_25	1112212.JH584235_gene1663	7.243e-31	126.0	29288@1|root,2ZPSV@2|Bacteria,1NJAG@1224|Proteobacteria,2UMCR@28211|Alphaproteobacteria,2K6S1@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	PepSY
SRD3_k127_1890939_15	1112212.JH584235_gene1664	2.832e-136	434.0	COG0745@1|root,COG0745@2|Bacteria,1N0YI@1224|Proteobacteria,2TSV8@28211|Alphaproteobacteria,2K0M9@204457|Sphingomonadales	204457|Sphingomonadales	T	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	-	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
SRD3_k127_1890939_7	1112216.JH594425_gene1446	9.548e-253	785.0	COG0642@1|root,COG2205@2|Bacteria,1QTVU@1224|Proteobacteria,2TW3R@28211|Alphaproteobacteria,2KEAU@204457|Sphingomonadales	204457|Sphingomonadales	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	2CSK_N,HATPase_c
SRD3_k127_1890939_11	1470591.BW41_01521	1.249e-174	552.0	COG2141@1|root,COG2141@2|Bacteria,1MVF0@1224|Proteobacteria,2TTR7@28211|Alphaproteobacteria,2K0NV@204457|Sphingomonadales	204457|Sphingomonadales	C	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases	-	-	-	-	-	-	-	-	-	-	-	-	Bac_luciferase
SRD3_k127_1890939_1	1112216.JH594425_gene1443	0.0	1013.0	COG1404@1|root,COG1404@2|Bacteria,1MU3S@1224|Proteobacteria,2U0VY@28211|Alphaproteobacteria,2K0U8@204457|Sphingomonadales	204457|Sphingomonadales	O	Subtilase family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
SRD3_k127_1890939_19	1112216.JH594425_gene1442	1.674e-110	361.0	COG0637@1|root,COG0637@2|Bacteria,1QTWD@1224|Proteobacteria,2TX5B@28211|Alphaproteobacteria,2K1QG@204457|Sphingomonadales	204457|Sphingomonadales	S	Haloacid dehalogenase-like hydrolase	-	-	-	ko:K07025	-	-	-	-	ko00000	-	-	-	HAD_2
SRD3_k127_1890939_13	1112216.JH594425_gene1441	4.199e-159	505.0	COG2171@1|root,COG2171@2|Bacteria,1MU0Y@1224|Proteobacteria,2TS3H@28211|Alphaproteobacteria,2K055@204457|Sphingomonadales	204457|Sphingomonadales	E	Belongs to the transferase hexapeptide repeat family	dapD	-	2.3.1.117	ko:K00674	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	M00016	R04365	RC00004,RC01136	ko00000,ko00001,ko00002,ko01000	-	-	-	Hexapep,Hexapep_2,THDPS_N_2
SRD3_k127_1890939_10	1112216.JH594425_gene1440	1.712e-190	598.0	COG1494@1|root,COG1494@2|Bacteria,1MUB1@1224|Proteobacteria,2TSPE@28211|Alphaproteobacteria,2JZUH@204457|Sphingomonadales	204457|Sphingomonadales	G	in Escherichia coli this protein forms a dimer and binds manganese	glpX	-	3.1.3.11,3.1.3.37	ko:K11532	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200	M00003,M00165,M00167	R00762,R01845,R04780	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	FBPase_glpX
SRD3_k127_1890939_14	1379701.JPJC01000112_gene500	4.448e-150	488.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,2TQR7@28211|Alphaproteobacteria,2K1AE@204457|Sphingomonadales	204457|Sphingomonadales	NT	chemotaxis	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	MCPsignal
SRD3_k127_1890939_6	1449049.JONW01000005_gene1880	3.96e-265	827.0	COG3258@1|root,COG3258@2|Bacteria,1R95B@1224|Proteobacteria,2U556@28211|Alphaproteobacteria	28211|Alphaproteobacteria	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1890939_23	1037409.BJ6T_51950	2.937e-63	220.0	2DN2N@1|root,32V77@2|Bacteria,1N2RN@1224|Proteobacteria,2UEPQ@28211|Alphaproteobacteria,3K41Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1890939_0	1112214.AHIS01000017_gene1331	0.0	1046.0	COG2936@1|root,COG2936@2|Bacteria,1MVA8@1224|Proteobacteria,2U29S@28211|Alphaproteobacteria,2K2EB@204457|Sphingomonadales	204457|Sphingomonadales	S	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	PepX_C,Peptidase_S15
SRD3_k127_1890939_16	1112212.JH584235_gene3300	2.271e-134	431.0	COG0842@1|root,COG0842@2|Bacteria,1MUH1@1224|Proteobacteria,2TQSY@28211|Alphaproteobacteria,2JZWT@204457|Sphingomonadales	204457|Sphingomonadales	V	Transport permease protein	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane
SRD3_k127_1890939_24	1007104.SUS17_546	1.054e-34	134.0	COG1131@1|root,COG1131@2|Bacteria,1MUW7@1224|Proteobacteria,2TR2Q@28211|Alphaproteobacteria,2K0Z9@204457|Sphingomonadales	204457|Sphingomonadales	V	ABC transporter, ATP-binding protein	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
SRD3_k127_1894290_1	438753.AZC_0033	8.497e-73	247.0	COG2030@1|root,COG2030@2|Bacteria,1MWPK@1224|Proteobacteria,2U5CQ@28211|Alphaproteobacteria,3F1EE@335928|Xanthobacteraceae	28211|Alphaproteobacteria	I	N-terminal half of MaoC dehydratase	-	GO:0003674,GO:0003824,GO:0003859,GO:0006081,GO:0006082,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044281,GO:0046487,GO:0071704	4.2.1.55	ko:K17865	ko00630,ko00650,ko01120,ko01200,map00630,map00650,map01120,map01200	M00373	R03027	RC00831	ko00000,ko00001,ko00002,ko01000	-	-	-	MaoC_dehydratas
SRD3_k127_1894290_0	670292.JH26_22065	2.445e-117	388.0	COG0477@1|root,COG2814@2|Bacteria,1MUXC@1224|Proteobacteria,2TRR7@28211|Alphaproteobacteria,1JRNQ@119045|Methylobacteriaceae	28211|Alphaproteobacteria	EGP	PFAM major facilitator superfamily MFS_1	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SRD3_k127_1944126_1	1081640.AGFU01000010_gene1475	6.408e-127	411.0	COG0446@1|root,COG0446@2|Bacteria,1Q0P8@1224|Proteobacteria,2U4CV@28211|Alphaproteobacteria,2KEGY@204457|Sphingomonadales	204457|Sphingomonadales	S	Tryptophan halogenase	-	-	1.14.19.9	ko:K14266	ko00404,ko01130,map00404,map01130	M00789,M00790	R09570	RC00949	ko00000,ko00001,ko00002,ko01000	-	-	-	Trp_halogenase
SRD3_k127_1944126_0	1090320.KB900605_gene2578	0.0	1649.0	COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,1MV8W@1224|Proteobacteria,2TSUV@28211|Alphaproteobacteria,2JZV0@204457|Sphingomonadales	204457|Sphingomonadales	P	receptor	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SRD3_k127_1973987_11	1144307.PMI04_01093	4.005e-07	51.0	COG3777@1|root,COG3777@2|Bacteria,1P96N@1224|Proteobacteria,2TV0U@28211|Alphaproteobacteria,2K46R@204457|Sphingomonadales	204457|Sphingomonadales	S	N-terminal half of MaoC dehydratase	-	-	4.2.1.153	ko:K09709	ko00720,ko01120,ko01200,map00720,map01120,map01200	M00376	R09282	RC02479	ko00000,ko00001,ko00002,ko01000	-	-	-	MaoC_dehydrat_N
SRD3_k127_1973987_2	46429.BV95_00092	1.433e-209	658.0	COG1804@1|root,COG1804@2|Bacteria,1R43P@1224|Proteobacteria,2U1WN@28211|Alphaproteobacteria,2K3HJ@204457|Sphingomonadales	204457|Sphingomonadales	C	carnitine dehydratase	-	-	5.4.1.3	ko:K14470	ko00720,ko01120,ko01200,map00720,map01120,map01200	M00376	R09283	RC02480	ko00000,ko00001,ko00002,ko01000	-	-	-	CoA_transf_3
SRD3_k127_1973987_9	1549858.MC45_09840	2.863e-52	191.0	COG3652@1|root,COG3652@2|Bacteria,1N6QU@1224|Proteobacteria,2UF70@28211|Alphaproteobacteria,2K4I4@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF4142)	-	-	-	ko:K08995	-	-	-	-	ko00000	-	-	-	DUF4142
SRD3_k127_1973987_10	1007104.SUS17_1624	4.965e-47	176.0	2C8DW@1|root,32RKY@2|Bacteria,1MZUD@1224|Proteobacteria,2UDVT@28211|Alphaproteobacteria,2KCA2@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF3597)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3597
SRD3_k127_1973987_6	69395.JQLZ01000005_gene3646	1.283e-92	312.0	COG0583@1|root,COG0583@2|Bacteria,1MWVB@1224|Proteobacteria,2TQXV@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SRD3_k127_1973987_0	13690.CP98_04302	5.984e-279	863.0	COG1012@1|root,COG1012@2|Bacteria,1MUHV@1224|Proteobacteria,2TSMD@28211|Alphaproteobacteria,2K04G@204457|Sphingomonadales	204457|Sphingomonadales	C	Methylmalonate-semialdehyde dehydrogenase	-	-	1.2.1.18,1.2.1.27	ko:K00140	ko00280,ko00410,ko00562,ko00640,ko01100,ko01200,map00280,map00410,map00562,map00640,map01100,map01200	M00013	R00705,R00706,R00922,R00935	RC00004,RC02723,RC02817	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
SRD3_k127_1973987_8	1502850.FG91_01998	8.52e-60	210.0	COG0346@1|root,COG0346@2|Bacteria,1PCEI@1224|Proteobacteria,2VA91@28211|Alphaproteobacteria,2KASE@204457|Sphingomonadales	204457|Sphingomonadales	E	lactoylglutathione lyase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1973987_7	1502850.FG91_01997	4.161e-73	248.0	COG1522@1|root,COG1522@2|Bacteria,1RHI9@1224|Proteobacteria,2UBWP@28211|Alphaproteobacteria,2KCX0@204457|Sphingomonadales	204457|Sphingomonadales	K	HTH domain	-	-	-	-	-	-	-	-	-	-	-	-	AsnC_trans_reg
SRD3_k127_1973987_5	1502850.FG91_01996	2.202e-106	357.0	COG1171@1|root,COG1171@2|Bacteria,1QVNS@1224|Proteobacteria,2TUHW@28211|Alphaproteobacteria	28211|Alphaproteobacteria	E	Diaminopropionate ammonia-lyase	-	-	4.3.1.15	ko:K01751	-	-	-	-	ko00000,ko01000	-	-	-	PALP
SRD3_k127_1973987_4	436229.JOEH01000008_gene4301	5.196e-140	450.0	COG2301@1|root,COG2301@2|Bacteria,2HGN2@201174|Actinobacteria,2NN2D@228398|Streptacidiphilus	201174|Actinobacteria	G	HpcH/HpaI aldolase/citrate lyase family	-	-	-	-	-	-	-	-	-	-	-	-	HpcH_HpaI
SRD3_k127_1973987_1	1545915.JROG01000004_gene2139	2.007e-221	693.0	COG1960@1|root,COG1960@2|Bacteria,1MVAH@1224|Proteobacteria,2TR02@28211|Alphaproteobacteria,2K124@204457|Sphingomonadales	204457|Sphingomonadales	I	acyl-CoA dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SRD3_k127_1973987_3	13689.BV96_00199	1.762e-184	578.0	COG0175@1|root,COG0175@2|Bacteria,1MUCZ@1224|Proteobacteria,2TT2D@28211|Alphaproteobacteria,2K1HF@204457|Sphingomonadales	204457|Sphingomonadales	EH	sulfate adenylyltransferase	cysD	-	2.7.7.4	ko:K00957	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	M00176,M00596	R00529,R04929	RC02809,RC02889	ko00000,ko00001,ko00002,ko01000	-	-	-	PAPS_reduct
SRD3_k127_1989572_3	485913.Krac_2634	6.976e-11	74.0	COG4585@1|root,COG4585@2|Bacteria	2|Bacteria	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	GAF,GAF_2,GAF_3,HATPase_c,HisKA_3,PAS
SRD3_k127_1989572_0	1112212.JH584235_gene3141	0.0	1791.0	COG0178@1|root,COG0178@2|Bacteria,1MW0W@1224|Proteobacteria,2TQK9@28211|Alphaproteobacteria,2K0VM@204457|Sphingomonadales	204457|Sphingomonadales	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate	uvrA	-	-	ko:K03701	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	ABC_tran
SRD3_k127_1989572_2	1123269.NX02_17445	1.958e-25	118.0	2DSP9@1|root,33GWM@2|Bacteria,1NIUN@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_1989572_1	1449076.JOOE01000001_gene2712	1.488e-43	166.0	2DHGE@1|root,2ZZNG@2|Bacteria,1P6PN@1224|Proteobacteria,2UY72@28211|Alphaproteobacteria,2KBU8@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	PilZ
SRD3_k127_1989572_5	1121373.KB903629_gene355	2.927e-07	57.0	290RU@1|root,2ZNDZ@2|Bacteria,4P8IR@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2002290_2	316058.RPB_3423	4.879e-67	249.0	COG1388@1|root,COG1388@2|Bacteria	2|Bacteria	M	LysM domain	-	-	-	ko:K08307	-	-	-	-	ko00000,ko01000,ko01011	-	-	-	DUF459,FecR,LysM,NLPC_P60,SLT
SRD3_k127_2002290_0	1112214.AHIS01000106_gene4000	0.0	1143.0	COG2366@1|root,COG2366@2|Bacteria,1MVMH@1224|Proteobacteria,2TS4D@28211|Alphaproteobacteria,2K1S8@204457|Sphingomonadales	204457|Sphingomonadales	S	COG2366 Protein related to penicillin acylase	-	-	-	-	-	-	-	-	-	-	-	-	Penicil_amidase
SRD3_k127_2002290_1	685778.AORL01000021_gene434	1.06e-201	635.0	COG1228@1|root,COG1228@2|Bacteria,1MVAF@1224|Proteobacteria,2U4WG@28211|Alphaproteobacteria,2K1X8@204457|Sphingomonadales	204457|Sphingomonadales	Q	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
SRD3_k127_2002290_3	1144305.PMI02_03511	1.483e-06	52.0	COG1706@1|root,COG1706@2|Bacteria,1MVKW@1224|Proteobacteria,2TQNX@28211|Alphaproteobacteria,2K00I@204457|Sphingomonadales	204457|Sphingomonadales	N	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation	flgI	-	-	ko:K02394	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FlgI
SRD3_k127_2003477_2	1150626.PHAMO_20069	3.889e-131	432.0	COG0367@1|root,COG0367@2|Bacteria,1MW4E@1224|Proteobacteria,2TSCY@28211|Alphaproteobacteria,2JR10@204441|Rhodospirillales	204441|Rhodospirillales	E	asparagine synthase, glutamine-hydrolyzing	-	-	6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	-	R00578	RC00010	ko00000,ko00001,ko01000,ko01002	-	-	-	Asn_synthase,GATase_7
SRD3_k127_2003477_3	1286093.C266_05059	1.039e-84	295.0	COG0498@1|root,COG0498@2|Bacteria,1R7X1@1224|Proteobacteria,2VHX3@28216|Betaproteobacteria,1K7DF@119060|Burkholderiaceae	28216|Betaproteobacteria	E	Threonine synthase	-	-	4.2.3.1	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	M00018	R01466,R05086	RC00017,RC00526	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
SRD3_k127_2003477_0	63737.Npun_R2083	2.126e-303	976.0	COG0236@1|root,COG0318@1|root,COG1960@1|root,COG0236@2|Bacteria,COG0318@2|Bacteria,COG1960@2|Bacteria,1G4CE@1117|Cyanobacteria,1HJ2S@1161|Nostocales	1117|Cyanobacteria	IQ	AMP-dependent synthetase and ligase	-	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N,PP-binding
SRD3_k127_2003477_1	1192034.CAP_3647	2.697e-231	754.0	COG1020@1|root,COG1020@2|Bacteria,1QK4F@1224|Proteobacteria	1224|Proteobacteria	Q	Non-ribosomal peptide synthetase modules and related proteins	-	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C,Acyl_transf_1,Condensation,KAsynt_C_assoc,Ketoacyl-synt_C,Methyltransf_21,Nitroreductase,PP-binding,Thioesterase,ketoacyl-synt
SRD3_k127_2014178_0	1112212.JH584235_gene2675	1.396e-256	794.0	COG1109@1|root,COG1109@2|Bacteria,1MU24@1224|Proteobacteria,2TQWH@28211|Alphaproteobacteria,2JZV4@204457|Sphingomonadales	204457|Sphingomonadales	G	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate	glmM	-	5.4.2.10	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	-	R02060	RC00408	ko00000,ko00001,ko01000	-	-	-	PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV
SRD3_k127_2014178_1	1550073.JROH01000003_gene2452	1.196e-152	493.0	COG1301@1|root,COG1301@2|Bacteria,1MVID@1224|Proteobacteria,2TUR0@28211|Alphaproteobacteria,2K09V@204457|Sphingomonadales	204457|Sphingomonadales	C	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family	-	-	-	-	-	-	-	-	-	-	-	-	SDF
SRD3_k127_2014178_2	1112216.JH594425_gene1280	1.093e-46	170.0	COG0500@1|root,COG2226@2|Bacteria,1REUM@1224|Proteobacteria,2U75Q@28211|Alphaproteobacteria,2K51Q@204457|Sphingomonadales	204457|Sphingomonadales	Q	ubiE/COQ5 methyltransferase family	-	-	-	ko:K13623	ko00564,map00564	-	R09073	RC00003,RC02308	ko00000,ko00001	-	-	-	Methyltransf_23,Methyltransf_25
SRD3_k127_2016238_0	1454004.AW11_00322	2.914e-192	616.0	COG5421@1|root,COG5421@2|Bacteria,1R3NX@1224|Proteobacteria	1224|Proteobacteria	L	PFAM transposase, IS4 family protein	-	-	-	-	-	-	-	-	-	-	-	-	DDE_Tnp_1
SRD3_k127_2016238_1	114615.BRADO2488	9.317e-48	174.0	COG0451@1|root,COG0451@2|Bacteria,1MWVE@1224|Proteobacteria,2TS8F@28211|Alphaproteobacteria,3JU8F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	GM	3-beta hydroxysteroid dehydrogenase/isomerase family	MA20_16995	-	1.1.1.203	ko:K18981	ko00053,map00053	-	R10841	RC00066	ko00000,ko00001,ko01000	-	-	-	Epimerase
SRD3_k127_2031254_8	1112212.JH584235_gene1104	4.501e-27	111.0	COG1876@1|root,COG1876@2|Bacteria,1N1CQ@1224|Proteobacteria,2U7GA@28211|Alphaproteobacteria,2K344@204457|Sphingomonadales	204457|Sphingomonadales	M	D-alanyl-D-alanine carboxypeptidase	-	-	3.4.17.14	ko:K07260	ko00550,ko01100,ko01502,ko02020,map00550,map01100,map01502,map02020	M00651	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	-	-	-	VanY
SRD3_k127_2031254_6	1449076.JOOE01000002_gene1410	5.918e-98	323.0	COG0655@1|root,COG0655@2|Bacteria,1MW7N@1224|Proteobacteria,2TR4Z@28211|Alphaproteobacteria,2K1XE@204457|Sphingomonadales	204457|Sphingomonadales	S	Belongs to the WrbA family	wrbA	-	1.6.5.2	ko:K03809	ko00130,ko01110,map00130,map01110	-	R02964,R03643,R03816	RC00819	ko00000,ko00001,ko01000	-	-	-	FMN_red
SRD3_k127_2031254_9	1112214.AHIS01000003_gene1832	8.17e-05	47.0	COG0587@1|root,COG0587@2|Bacteria,1MUE4@1224|Proteobacteria,2TRUB@28211|Alphaproteobacteria,2JZWI@204457|Sphingomonadales	204457|Sphingomonadales	L	DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase	-	-	-	-	-	-	-	-	-	-	-	-	DNA_pol3_alpha,HHH_6,PHP,tRNA_anti-codon
SRD3_k127_2031254_5	1112214.AHIS01000070_gene3131	2.711e-134	430.0	COG1741@1|root,COG1741@2|Bacteria,1MVSW@1224|Proteobacteria,2TSR6@28211|Alphaproteobacteria,2K0PN@204457|Sphingomonadales	204457|Sphingomonadales	S	Belongs to the pirin family	-	-	-	ko:K06911	-	-	-	-	ko00000	-	-	-	Pirin
SRD3_k127_2031254_2	1112214.AHIS01000070_gene3130	5.233e-152	486.0	COG0583@1|root,COG0583@2|Bacteria,1MW16@1224|Proteobacteria,2TRIG@28211|Alphaproteobacteria,2JZV3@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SRD3_k127_2031254_3	1112214.AHIS01000070_gene3128	8.469e-144	458.0	COG0745@1|root,COG0745@2|Bacteria,1MWVI@1224|Proteobacteria,2TRSP@28211|Alphaproteobacteria,2K0S8@204457|Sphingomonadales	204457|Sphingomonadales	T	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	ctrA	-	-	ko:K13584	ko02020,ko04112,map02020,map04112	M00512	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
SRD3_k127_2031254_0	1112212.JH584235_gene1109	4.781e-289	905.0	COG1574@1|root,COG1574@2|Bacteria,1MWP2@1224|Proteobacteria,2TTRU@28211|Alphaproteobacteria,2K1UV@204457|Sphingomonadales	204457|Sphingomonadales	S	Metal-dependent hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_3
SRD3_k127_2031254_4	1174684.EBMC1_00140	6.59e-136	437.0	COG2084@1|root,COG2084@2|Bacteria,1MUGU@1224|Proteobacteria,2TT50@28211|Alphaproteobacteria,2K0B1@204457|Sphingomonadales	204457|Sphingomonadales	I	COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases	-	-	1.1.1.31	ko:K00020	ko00280,ko01100,map00280,map01100	-	R05066	RC00099	ko00000,ko00001,ko01000	-	-	-	NAD_binding_11,NAD_binding_2
SRD3_k127_2031254_1	1112212.JH584235_gene1110	5.516e-235	730.0	COG1171@1|root,COG1171@2|Bacteria,1MVWJ@1224|Proteobacteria,2TQN9@28211|Alphaproteobacteria,2K130@204457|Sphingomonadales	204457|Sphingomonadales	E	Threonine dehydratase	ilvA	-	4.3.1.19	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	M00570	R00220,R00996	RC00418,RC02600	ko00000,ko00001,ko00002,ko01000	-	-	-	ACT,PALP
SRD3_k127_2031254_7	1090320.KB900605_gene472	1.995e-67	231.0	COG2935@1|root,COG2935@2|Bacteria,1MW62@1224|Proteobacteria,2TQY8@28211|Alphaproteobacteria,2K00M@204457|Sphingomonadales	204457|Sphingomonadales	O	May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate	ate	-	2.3.2.29	ko:K21420	-	-	R11547,R11548	RC00064	ko00000,ko01000	-	-	-	ATE_C,ATE_N
SRD3_k127_204034_8	1112212.JH584235_gene3566	1.253e-132	426.0	COG1738@1|root,COG1738@2|Bacteria,1NIPE@1224|Proteobacteria,2TTZV@28211|Alphaproteobacteria,2K1FS@204457|Sphingomonadales	204457|Sphingomonadales	S	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage	-	-	-	ko:K09125	-	-	-	-	ko00000	-	-	-	Vut_1
SRD3_k127_204034_9	1470591.BW41_02055	2.058e-126	408.0	COG0047@1|root,COG0047@2|Bacteria,1MU4Y@1224|Proteobacteria,2TS67@28211|Alphaproteobacteria,2K0NC@204457|Sphingomonadales	204457|Sphingomonadales	F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL	purQ	-	6.3.5.3	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04463	RC00010,RC01160	ko00000,ko00001,ko00002,ko01000	-	-	-	GATase_5
SRD3_k127_204034_13	1112212.JH584235_gene3568	9.045e-34	132.0	COG1828@1|root,COG1828@2|Bacteria,1N83G@1224|Proteobacteria,2UF7S@28211|Alphaproteobacteria,2K5YV@204457|Sphingomonadales	204457|Sphingomonadales	F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL	purS	-	6.3.5.3	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04463	RC00010,RC01160	ko00000,ko00001,ko00002,ko01000	-	-	-	PurS
SRD3_k127_204034_17	1123320.KB889618_gene7115	0.0006502	51.0	2DGC1@1|root,2ZB0H@2|Bacteria,2GNIG@201174|Actinobacteria	201174|Actinobacteria	S	phospholipase D activity	pld	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_204034_16	3067.XP_002946691.1	0.0004911	52.0	COG2319@1|root,KOG3599@1|root,KOG2106@2759|Eukaryota,KOG3599@2759|Eukaryota,383ZN@33090|Viridiplantae,34KCY@3041|Chlorophyta	3041|Chlorophyta	PT	Lipoxygenase homology 2 (beta barrel) domain	-	-	-	-	-	-	-	-	-	-	-	-	HELP,PLAT
SRD3_k127_204034_11	1088721.NSU_0986	1.466e-51	199.0	COG3063@1|root,COG3063@2|Bacteria	2|Bacteria	NU	photosynthesis	-	-	-	ko:K20543	-	-	-	-	ko00000,ko02000	1.B.55.3	-	-	BCSC_C,DUF560,TPR_16,TPR_19,TPR_8
SRD3_k127_204034_15	1081640.AGFU01000026_gene2564	3.44e-05	56.0	2ADKN@1|root,313BB@2|Bacteria,1NWGU@1224|Proteobacteria,2USIB@28211|Alphaproteobacteria,2K5N0@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	TbpB_B_D
SRD3_k127_204034_3	1112212.JH584235_gene3570	4.212e-163	515.0	COG0152@1|root,COG0152@2|Bacteria,1MUR9@1224|Proteobacteria,2TR8D@28211|Alphaproteobacteria,2K0D0@204457|Sphingomonadales	204457|Sphingomonadales	F	Belongs to the SAICAR synthetase family	purC	-	6.3.2.6	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04591	RC00064,RC00162	ko00000,ko00001,ko00002,ko01000	-	-	-	SAICAR_synt
SRD3_k127_204034_14	1090320.KB900605_gene2032	7.593e-26	123.0	2E689@1|root,30I1X@2|Bacteria,1NUXE@1224|Proteobacteria,2UR9A@28211|Alphaproteobacteria,2K6GF@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF4349)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4349
SRD3_k127_204034_2	1112212.JH584235_gene3571	2.188e-201	632.0	COG3844@1|root,COG3844@2|Bacteria,1MUKN@1224|Proteobacteria,2TR62@28211|Alphaproteobacteria,2K1KR@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively	kynU	-	3.7.1.3	ko:K01556	ko00380,ko01100,map00380,map01100	M00038	R00987,R02668,R03936	RC00284,RC00415	ko00000,ko00001,ko00002,ko01000	-	-	-	Aminotran_5
SRD3_k127_204034_7	1379701.JPJC01000082_gene2187	9.096e-138	444.0	COG0657@1|root,COG0657@2|Bacteria,1RFS9@1224|Proteobacteria,2VFM5@28211|Alphaproteobacteria,2KDXA@204457|Sphingomonadales	204457|Sphingomonadales	I	alpha/beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3
SRD3_k127_204034_6	1123270.ATUR01000004_gene1665	1.287e-139	458.0	COG2067@1|root,COG2067@2|Bacteria,1MUU4@1224|Proteobacteria,2TS9S@28211|Alphaproteobacteria,2K0PY@204457|Sphingomonadales	204457|Sphingomonadales	I	Long-chain fatty acid	-	-	-	ko:K06076	-	-	-	-	ko00000,ko02000	1.B.9	-	-	Toluene_X
SRD3_k127_204034_5	685778.AORL01000014_gene2244	6.351e-148	473.0	COG0583@1|root,COG0583@2|Bacteria,1MWY0@1224|Proteobacteria,2TU4E@28211|Alphaproteobacteria,2K07U@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SRD3_k127_204034_0	1112212.JH584235_gene3573	0.0	1264.0	COG0188@1|root,COG0188@2|Bacteria,1MURI@1224|Proteobacteria,2TQRQ@28211|Alphaproteobacteria,2K0IA@204457|Sphingomonadales	204457|Sphingomonadales	L	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule	parC	-	-	ko:K02621	-	-	-	-	ko00000,ko01000,ko02048,ko03032,ko03036	-	-	-	DNA_gyraseA_C,DNA_topoisoIV
SRD3_k127_204034_1	1112214.AHIS01000063_gene2775	2.07e-257	804.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2UP6H@28211|Alphaproteobacteria,2JZX5@204457|Sphingomonadales	204457|Sphingomonadales	T	Putative diguanylate phosphodiesterase	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF
SRD3_k127_204034_4	1449076.JOOE01000001_gene2437	7.888e-150	488.0	COG0617@1|root,COG0617@2|Bacteria,1MVCS@1224|Proteobacteria,2TRPZ@28211|Alphaproteobacteria,2K1SR@204457|Sphingomonadales	204457|Sphingomonadales	J	Polynucleotide adenylyltransferase	cca	-	2.7.7.19	ko:K00970	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	PolyA_pol,PolyA_pol_RNAbd
SRD3_k127_204034_10	1030157.AFMP01000025_gene970	6.181e-67	234.0	COG0494@1|root,COG0494@2|Bacteria,1RD2C@1224|Proteobacteria,2TV3Q@28211|Alphaproteobacteria,2K3ZW@204457|Sphingomonadales	204457|Sphingomonadales	L	Nudix hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
SRD3_k127_204034_12	1549858.MC45_11630	4.437e-34	131.0	COG3816@1|root,COG3816@2|Bacteria,1RD5Q@1224|Proteobacteria,2U7DA@28211|Alphaproteobacteria,2K0YC@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	ko:K09986	-	-	-	-	ko00000	-	-	-	DUF1285
SRD3_k127_204602_17	1112216.JH594425_gene192	3.992e-77	282.0	COG0479@1|root,COG0479@2|Bacteria,1MVHS@1224|Proteobacteria,2TQYF@28211|Alphaproteobacteria,2K0CN@204457|Sphingomonadales	204457|Sphingomonadales	C	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family	sdhB	-	1.3.5.1,1.3.5.4	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2_3,Fer4_17
SRD3_k127_204602_2	1123270.ATUR01000002_gene2397	4.467e-202	637.0	COG1304@1|root,COG1304@2|Bacteria,1MUEZ@1224|Proteobacteria,2TQNW@28211|Alphaproteobacteria,2K18M@204457|Sphingomonadales	204457|Sphingomonadales	C	Dehydrogenase	-	-	1.1.2.3,1.1.99.31	ko:K00101,ko:K15054	ko00620,ko00627,ko01100,ko01120,map00620,map00627,map01100,map01120	-	R00196,R04160,R07664	RC00044,RC00240	ko00000,ko00001,ko01000	-	-	-	FMN_dh
SRD3_k127_204602_9	1123270.ATUR01000002_gene2396	7.015e-139	458.0	COG4452@1|root,COG4452@2|Bacteria,1MVVR@1224|Proteobacteria,2TVJ2@28211|Alphaproteobacteria,2K3GA@204457|Sphingomonadales	204457|Sphingomonadales	V	Inner membrane protein CreD	-	-	-	-	-	-	-	-	-	-	-	-	CreD
SRD3_k127_204602_13	1112212.JH584235_gene3122	9.859e-102	334.0	COG0740@1|root,COG0740@2|Bacteria,1RFPT@1224|Proteobacteria,2U7ZR@28211|Alphaproteobacteria,2K1QT@204457|Sphingomonadales	204457|Sphingomonadales	OU	Clp protease	-	-	-	-	-	-	-	-	-	-	-	-	CLP_protease
SRD3_k127_204602_12	314225.ELI_07145	1.308e-104	349.0	28VPU@1|root,2ZHRS@2|Bacteria,1R7QU@1224|Proteobacteria,2U49X@28211|Alphaproteobacteria,2K3S8@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_204602_0	1112212.JH584235_gene3121	0.0	1168.0	COG1053@1|root,COG1053@2|Bacteria,1MU5M@1224|Proteobacteria,2TQJA@28211|Alphaproteobacteria,2K1NE@204457|Sphingomonadales	204457|Sphingomonadales	C	Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily	sdhA	-	1.3.5.1,1.3.5.4	ko:K00239	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_2,Succ_DH_flav_C
SRD3_k127_204602_18	1379701.JPJC01000112_gene498	1.284e-51	185.0	COG2142@1|root,COG2142@2|Bacteria,1MZND@1224|Proteobacteria,2UC3G@28211|Alphaproteobacteria,2K550@204457|Sphingomonadales	204457|Sphingomonadales	C	succinate dehydrogenase	sdhD	-	-	ko:K00242	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00149,M00173	R02164	RC00045	ko00000,ko00001,ko00002	-	-	-	Sdh_cyt
SRD3_k127_204602_19	1449076.JOOE01000003_gene3158	6.747e-51	185.0	COG2009@1|root,COG2009@2|Bacteria,1N02N@1224|Proteobacteria,2UC47@28211|Alphaproteobacteria,2K6ED@204457|Sphingomonadales	204457|Sphingomonadales	C	succinate dehydrogenase	sdhC	-	-	ko:K00241	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002	-	-	-	Sdh_cyt
SRD3_k127_204602_3	1112212.JH584235_gene3118	3.922e-193	612.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,2TQR7@28211|Alphaproteobacteria,2K1AE@204457|Sphingomonadales	204457|Sphingomonadales	NT	chemotaxis	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	MCPsignal
SRD3_k127_204602_4	1112212.JH584235_gene3117	2.547e-191	607.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,2TQR7@28211|Alphaproteobacteria,2K1AE@204457|Sphingomonadales	204457|Sphingomonadales	NT	chemotaxis	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	MCPsignal
SRD3_k127_204602_10	1112216.JH594425_gene200	3.517e-128	412.0	COG1028@1|root,COG1028@2|Bacteria,1R8HN@1224|Proteobacteria,2U0TG@28211|Alphaproteobacteria,2K2FB@204457|Sphingomonadales	204457|Sphingomonadales	IQ	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	-	-	-	-	-	-	-	-	-	-	-	-	adh_short,adh_short_C2
SRD3_k127_204602_11	1550073.JROH01000044_gene3151	9.564e-114	374.0	COG2264@1|root,COG2264@2|Bacteria,1MUPC@1224|Proteobacteria,2TTP3@28211|Alphaproteobacteria,2K0Q7@204457|Sphingomonadales	204457|Sphingomonadales	J	ribosomal protein L11	prmA	-	-	ko:K02687	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PrmA
SRD3_k127_204602_7	1112212.JH584235_gene3107	7.532e-167	526.0	COG3186@1|root,COG3186@2|Bacteria,1MU29@1224|Proteobacteria,2TU1E@28211|Alphaproteobacteria,2K01F@204457|Sphingomonadales	204457|Sphingomonadales	E	Phenylalanine-4-hydroxylase	phhA	-	1.14.16.1	ko:K00500	ko00360,ko00400,ko00790,ko01100,ko01230,map00360,map00400,map00790,map01100,map01230	-	R01795,R07211	RC00490	ko00000,ko00001,ko01000	-	-	-	Biopterin_H
SRD3_k127_204602_16	1112214.AHIS01000031_gene1135	2.853e-86	291.0	2BXI0@1|root,2Z9A2@2|Bacteria,1MZF7@1224|Proteobacteria,2UCIX@28211|Alphaproteobacteria,2K3UM@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF2459)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2459
SRD3_k127_204602_14	1112212.JH584235_gene3108	2.017e-99	331.0	COG1075@1|root,COG1075@2|Bacteria,1NJNA@1224|Proteobacteria,2UREM@28211|Alphaproteobacteria,2KCJ5@204457|Sphingomonadales	204457|Sphingomonadales	S	Alpha beta hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
SRD3_k127_204602_21	1112212.JH584235_gene3109	1.507e-22	100.0	2DCTG@1|root,2ZF9T@2|Bacteria,1N82Z@1224|Proteobacteria,2UGXI@28211|Alphaproteobacteria,2K6Y3@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_204602_6	1112212.JH584235_gene3110	4.15e-172	546.0	COG0584@1|root,COG0584@2|Bacteria,1MVWZ@1224|Proteobacteria,2TV4M@28211|Alphaproteobacteria,2K0H8@204457|Sphingomonadales	204457|Sphingomonadales	C	glycerophosphoryl diester phosphodiesterase	glpQ	-	3.1.4.46	ko:K01126	ko00564,map00564	-	R01030,R01470	RC00017,RC00425	ko00000,ko00001,ko01000	-	-	-	GDPD
SRD3_k127_204602_15	1112212.JH584235_gene3111	1.605e-92	307.0	COG2080@1|root,COG2080@2|Bacteria,1MY3F@1224|Proteobacteria,2TRGH@28211|Alphaproteobacteria,2K11H@204457|Sphingomonadales	204457|Sphingomonadales	C	aerobic-type carbon monoxide dehydrogenase, small subunit CoxS	-	-	-	ko:K13483	ko00230,ko01100,ko01120,map00230,map01100,map01120	M00546	R01768,R02103	RC00143	ko00000,ko00001,ko00002	-	-	-	Fer2,Fer2_2
SRD3_k127_204602_5	1112216.JH594425_gene205	4.081e-174	554.0	COG1319@1|root,COG1319@2|Bacteria,1MVJS@1224|Proteobacteria,2TRAR@28211|Alphaproteobacteria,2K1FP@204457|Sphingomonadales	204457|Sphingomonadales	C	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM	-	-	1.17.1.4	ko:K11178	ko00230,ko01100,ko01120,map00230,map01100,map01120	M00546	R01768,R02103	RC00143	ko00000,ko00001,ko00002,ko01000	-	-	-	CO_deh_flav_C,FAD_binding_5
SRD3_k127_204602_1	1112216.JH594425_gene203	0.0	1165.0	COG1529@1|root,COG1529@2|Bacteria,1MUEA@1224|Proteobacteria,2TRFN@28211|Alphaproteobacteria,2K06M@204457|Sphingomonadales	204457|Sphingomonadales	C	Xanthine dehydrogenase	-	-	1.17.1.4	ko:K11177	ko00230,ko01100,ko01120,map00230,map01100,map01120	M00546	R01768,R02103	RC00143	ko00000,ko00001,ko00002,ko01000	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2
SRD3_k127_204602_8	1219049.SP5_017_00290	1.203e-165	524.0	COG1975@1|root,COG1975@2|Bacteria,1MXKU@1224|Proteobacteria,2TUF3@28211|Alphaproteobacteria,2K17D@204457|Sphingomonadales	204457|Sphingomonadales	O	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family	-	-	-	ko:K07402	-	-	-	-	ko00000	-	-	-	XdhC_C,XdhC_CoxI
SRD3_k127_204602_20	1112212.JH584235_gene3115	2.646e-43	164.0	COG2068@1|root,COG2068@2|Bacteria,1MW0X@1224|Proteobacteria,2TR5D@28211|Alphaproteobacteria,2K40X@204457|Sphingomonadales	204457|Sphingomonadales	S	MobA-like NTP transferase domain	-	-	2.7.7.76	ko:K07141	ko00790,map00790	-	R11582	-	ko00000,ko00001,ko01000	-	-	-	NTP_transf_3
SRD3_k127_2103142_0	1048339.KB913029_gene3391	1.086e-33	145.0	COG0356@1|root,COG0356@2|Bacteria,2H3PR@201174|Actinobacteria,4ETD3@85013|Frankiales	201174|Actinobacteria	C	it plays a direct role in the translocation of protons across the membrane	atpB	-	-	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko03110	3.A.2.1	-	-	ATP-synt_A
SRD3_k127_2103142_1	1048339.KB913029_gene3392	1.882e-20	92.0	COG0636@1|root,COG0636@2|Bacteria,2IQZQ@201174|Actinobacteria,4EWJ5@85013|Frankiales	201174|Actinobacteria	C	ATP synthase subunit C	atpE	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0015988,GO:0015991,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600	-	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	iNJ661.Rv1305	ATP-synt_C
SRD3_k127_2103142_2	469371.Tbis_0896	9.269e-08	62.0	COG0711@1|root,COG0711@2|Bacteria,2GJS4@201174|Actinobacteria,4E2Q8@85010|Pseudonocardiales	201174|Actinobacteria	C	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)	atpF	-	-	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt_B
SRD3_k127_211135_1	1411123.JQNH01000001_gene122	3.255e-175	569.0	COG4618@1|root,COG4618@2|Bacteria,1NTI5@1224|Proteobacteria,2TR17@28211|Alphaproteobacteria	28211|Alphaproteobacteria	V	COG4618 ABC-type protease lipase transport system, ATPase and permease components	prsD	GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0016020,GO:0044464,GO:0046903,GO:0051179,GO:0051234,GO:0071944	-	ko:K12539	ko02010,map02010	M00329	-	-	ko00000,ko00001,ko00002,ko02000,ko02044	3.A.1.110.3	-	-	ABC_membrane,ABC_tran
SRD3_k127_211135_3	279238.Saro_0245	1.096e-104	355.0	COG0845@1|root,COG0845@2|Bacteria,1MUI8@1224|Proteobacteria,2TSP0@28211|Alphaproteobacteria,2K9RW@204457|Sphingomonadales	204457|Sphingomonadales	M	Biotin-lipoyl like	-	-	-	ko:K02022	-	-	-	-	ko00000	-	-	-	Biotin_lipoyl_2,HlyD_3
SRD3_k127_211135_4	1112216.JH594425_gene290	5.879e-48	177.0	2AM67@1|root,31C0M@2|Bacteria,1Q7Z2@1224|Proteobacteria,2VE4K@28211|Alphaproteobacteria,2K6X1@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_211135_5	1267005.KB911260_gene3518	5.386e-45	168.0	2C3ZQ@1|root,32SCF@2|Bacteria,1N27R@1224|Proteobacteria,2U7GM@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	MEKHLA domain protein	-	-	-	-	-	-	-	-	-	-	-	-	MEKHLA
SRD3_k127_211135_2	1174684.EBMC1_16269	8.64e-107	351.0	COG1218@1|root,COG1218@2|Bacteria,1MY0Z@1224|Proteobacteria,2TQWF@28211|Alphaproteobacteria,2K0NZ@204457|Sphingomonadales	204457|Sphingomonadales	P	3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase	-	-	3.1.3.7	ko:K01082	ko00920,ko01100,ko01120,ko01130,map00920,map01100,map01120,map01130	-	R00188,R00508	RC00078	ko00000,ko00001,ko01000,ko03016	-	-	-	Inositol_P
SRD3_k127_211135_0	1192759.AKIB01000004_gene484	0.0	1092.0	COG0529@1|root,COG2895@1|root,COG0529@2|Bacteria,COG2895@2|Bacteria,1MUD9@1224|Proteobacteria,2TQNJ@28211|Alphaproteobacteria,2K22T@204457|Sphingomonadales	204457|Sphingomonadales	P	Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily	cysC	-	2.7.1.25,2.7.7.4	ko:K00955,ko:K00956	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	M00176,M00596	R00509,R00529,R04928,R04929	RC00002,RC00078,RC02809,RC02889	ko00000,ko00001,ko00002,ko01000	-	-	-	APS_kinase,GTP_EFTU,GTP_EFTU_D2
SRD3_k127_2144738_1	1090320.KB900605_gene854	0.0	1033.0	COG1629@1|root,COG4771@2|Bacteria,1MWKN@1224|Proteobacteria,2TTFY@28211|Alphaproteobacteria,2K075@204457|Sphingomonadales	204457|Sphingomonadales	P	receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SRD3_k127_2144738_9	1090320.KB900605_gene853	6.724e-174	555.0	COG2271@1|root,COG2271@2|Bacteria,1MWYR@1224|Proteobacteria,2TSXW@28211|Alphaproteobacteria,2K1KD@204457|Sphingomonadales	204457|Sphingomonadales	G	COG0477 Permeases of the major facilitator superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SRD3_k127_2144738_2	1112216.JH594425_gene612	4.539e-314	964.0	COG4108@1|root,COG4108@2|Bacteria,1MU7X@1224|Proteobacteria,2TRP5@28211|Alphaproteobacteria,2K0N8@204457|Sphingomonadales	204457|Sphingomonadales	J	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP	prfC	-	-	ko:K02837	-	-	-	-	ko00000,ko03012	-	-	-	GTP_EFTU,GTP_EFTU_D2,RF3_C
SRD3_k127_2144738_14	1112212.JH584235_gene2543	6.836e-125	406.0	COG2017@1|root,COG2017@2|Bacteria,1MVR4@1224|Proteobacteria,2TZZR@28211|Alphaproteobacteria,2K0MD@204457|Sphingomonadales	204457|Sphingomonadales	G	Aldose 1-epimerase	-	-	-	-	-	-	-	-	-	-	-	-	Aldose_epim
SRD3_k127_2144738_0	1549858.MC45_17525	0.0	1272.0	COG0072@1|root,COG0072@2|Bacteria,1MWKS@1224|Proteobacteria,2TQV8@28211|Alphaproteobacteria,2K02I@204457|Sphingomonadales	204457|Sphingomonadales	J	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily	pheT	-	6.1.1.20	ko:K01890	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	B3_4,B5,FDX-ACB,tRNA_bind
SRD3_k127_2144738_7	1549858.MC45_17520	7.594e-200	629.0	COG0016@1|root,COG0016@2|Bacteria,1MVD7@1224|Proteobacteria,2TS2T@28211|Alphaproteobacteria,2K0XB@204457|Sphingomonadales	204457|Sphingomonadales	J	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily	pheS	-	6.1.1.20	ko:K01889	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Phe_tRNA-synt_N,tRNA-synt_2d
SRD3_k127_2144738_31	633149.Bresu_1989	9.838e-30	126.0	COG1670@1|root,COG1670@2|Bacteria,1RIR5@1224|Proteobacteria,2UBMM@28211|Alphaproteobacteria,2KJAG@204458|Caulobacterales	204458|Caulobacterales	J	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3
SRD3_k127_2144738_22	1030157.AFMP01000043_gene1687	8.849e-64	219.0	COG0292@1|root,COG0292@2|Bacteria,1RGU2@1224|Proteobacteria,2U756@28211|Alphaproteobacteria,2K4FX@204457|Sphingomonadales	204457|Sphingomonadales	J	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit	rplT	-	-	ko:K02887	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L20
SRD3_k127_2144738_30	1123269.NX02_24585	7.313e-33	128.0	COG0291@1|root,COG0291@2|Bacteria,1N6V4@1224|Proteobacteria,2UF6K@28211|Alphaproteobacteria,2K5YR@204457|Sphingomonadales	204457|Sphingomonadales	J	Belongs to the bacterial ribosomal protein bL35 family	rpmI	-	-	ko:K02916	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L35p
SRD3_k127_2144738_4	1449076.JOOE01000003_gene3421	4.511e-296	924.0	COG2982@1|root,COG2982@2|Bacteria,1MUAN@1224|Proteobacteria,2U26R@28211|Alphaproteobacteria,2K0CA@204457|Sphingomonadales	204457|Sphingomonadales	M	AsmA-like C-terminal region	-	-	-	ko:K07290	-	-	-	-	ko00000	9.B.121	-	-	AsmA
SRD3_k127_2144738_11	1112214.AHIS01000047_gene1965	9.453e-138	445.0	COG0483@1|root,COG0483@2|Bacteria,1PPJ0@1224|Proteobacteria,2TQTX@28211|Alphaproteobacteria,2K0WC@204457|Sphingomonadales	204457|Sphingomonadales	G	COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family	-	-	-	-	-	-	-	-	-	-	-	-	Inositol_P
SRD3_k127_2144738_15	1112216.JH594425_gene620	3.331e-113	377.0	COG2829@1|root,COG2829@2|Bacteria,1PC8I@1224|Proteobacteria,2UNU9@28211|Alphaproteobacteria,2K1CZ@204457|Sphingomonadales	204457|Sphingomonadales	M	Phospholipase A1	-	-	-	-	-	-	-	-	-	-	-	-	PLA1
SRD3_k127_2144738_35	1379701.JPJC01000029_gene679	4.035e-10	64.0	2AKQ3@1|root,31BGU@2|Bacteria,1P8FX@1224|Proteobacteria,2UZ0K@28211|Alphaproteobacteria,2K7RN@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2144738_25	1207055.C100_07265	5.206e-47	170.0	COG2824@1|root,COG2824@2|Bacteria,1RGUU@1224|Proteobacteria,2UFDJ@28211|Alphaproteobacteria,2K59J@204457|Sphingomonadales	204457|Sphingomonadales	P	PhnA protein	-	-	-	ko:K06193	ko01120,map01120	-	-	-	ko00000	-	-	-	PhnA
SRD3_k127_2144738_13	1449076.JOOE01000004_gene73	1.715e-126	408.0	COG0692@1|root,COG0692@2|Bacteria,1MV80@1224|Proteobacteria,2U1VI@28211|Alphaproteobacteria,2K0CQ@204457|Sphingomonadales	204457|Sphingomonadales	L	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine	ung	-	3.2.2.27	ko:K03648	ko03410,ko05340,map03410,map05340	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	UDG
SRD3_k127_2144738_29	745310.G432_07720	3.182e-33	135.0	COG1514@1|root,COG1514@2|Bacteria,1NJSB@1224|Proteobacteria,2UJE4@28211|Alphaproteobacteria,2K7YE@204457|Sphingomonadales	204457|Sphingomonadales	J	2',5' RNA ligase	-	-	3.1.4.58	ko:K01975	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	2_5_RNA_ligase2
SRD3_k127_2144738_26	194867.ALBQ01000053_gene1807	6.548e-47	174.0	COG5579@1|root,COG5579@2|Bacteria,1RGXV@1224|Proteobacteria,2U9EH@28211|Alphaproteobacteria,2K605@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF1810)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1810
SRD3_k127_2144738_27	13690.CP98_04978	8.776e-42	162.0	COG3179@1|root,COG3179@2|Bacteria,1RC1P@1224|Proteobacteria,2U5PY@28211|Alphaproteobacteria,2K7PA@204457|Sphingomonadales	204457|Sphingomonadales	V	Glycoside hydrolase, family 19	-	-	-	ko:K03791	-	-	-	-	ko00000	-	GH19	-	Glyco_hydro_19,PG_binding_1
SRD3_k127_2144738_3	1112214.AHIS01000047_gene2079	1.524e-301	934.0	COG5265@1|root,COG5265@2|Bacteria,1NSKS@1224|Proteobacteria,2UQAG@28211|Alphaproteobacteria,2K16I@204457|Sphingomonadales	204457|Sphingomonadales	V	ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase	-	-	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
SRD3_k127_2144738_32	1090318.ATTI01000001_gene3260	1.11e-26	110.0	2CIBQ@1|root,300DF@2|Bacteria,1PBAP@1224|Proteobacteria,2UYXT@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2144738_28	1112212.JH584235_gene2571	2.812e-39	155.0	2DRDD@1|root,33BAA@2|Bacteria,1NJN6@1224|Proteobacteria,2UYTI@28211|Alphaproteobacteria,2K8DW@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2144738_10	1379701.JPJC01000029_gene669	2.214e-146	472.0	COG1562@1|root,COG1562@2|Bacteria,1MX4W@1224|Proteobacteria,2TTI0@28211|Alphaproteobacteria,2K2BH@204457|Sphingomonadales	204457|Sphingomonadales	I	Phytoene synthase	crtB	-	2.5.1.32,2.5.1.99	ko:K02291	ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110	M00097	R02065,R04218,R07270,R10177	RC00362,RC01101,RC02869	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	SQS_PSY
SRD3_k127_2144738_16	1112212.JH584235_gene2569	5.154e-106	346.0	COG1611@1|root,COG1611@2|Bacteria,1RD59@1224|Proteobacteria,2U5DP@28211|Alphaproteobacteria,2K0TW@204457|Sphingomonadales	204457|Sphingomonadales	K	Belongs to the LOG family	-	-	3.2.2.10	ko:K06966	ko00230,ko00240,map00230,map00240	-	R00182,R00510	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	Lysine_decarbox
SRD3_k127_2144738_34	398767.Glov_2584	8.665e-22	100.0	2EGMG@1|root,33ADN@2|Bacteria,1NJDI@1224|Proteobacteria	1224|Proteobacteria	S	Cysteine-rich CPCC	-	-	-	-	-	-	-	-	-	-	-	-	Cys_rich_CPCC
SRD3_k127_2144738_5	1112216.JH594425_gene1103	1.842e-289	904.0	COG1233@1|root,COG1233@2|Bacteria,1MV2R@1224|Proteobacteria,2TSR0@28211|Alphaproteobacteria,2K17H@204457|Sphingomonadales	204457|Sphingomonadales	Q	Phytoene dehydrogenase	crtI	-	1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31	ko:K10027	ko00906,ko01100,ko01110,map00906,map01100,map01110	-	R04787,R04798,R04800,R09691,R09692	RC01214,RC02088,RC02605	ko00000,ko00001,ko01000	-	-	-	Amino_oxidase
SRD3_k127_2144738_8	1112216.JH594425_gene1104	6.18e-187	591.0	COG0654@1|root,COG0654@2|Bacteria,1N8DE@1224|Proteobacteria,2TU88@28211|Alphaproteobacteria,2K0B6@204457|Sphingomonadales	204457|Sphingomonadales	CH	Lycopene cyclase protein	crtY	-	5.5.1.19	ko:K06443	ko00906,ko01100,ko01110,map00906,map01100,map01110	M00097	R03824,R04801,R05341,R06962,R07856	RC01004,RC01964	ko00000,ko00001,ko00002,ko01000	-	-	-	Lycopene_cycl
SRD3_k127_2144738_21	1449076.JOOE01000003_gene3551	1.025e-73	254.0	COG0625@1|root,COG0625@2|Bacteria,1MY47@1224|Proteobacteria,2TVGA@28211|Alphaproteobacteria,2K3KU@204457|Sphingomonadales	204457|Sphingomonadales	O	Glutathione S-transferase, N-terminal domain	bphK	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_N,GST_N_2,GST_N_3
SRD3_k127_2144738_23	1449076.JOOE01000003_gene3550	9.674e-56	200.0	COG1309@1|root,COG1309@2|Bacteria,1N2VD@1224|Proteobacteria,2U0HH@28211|Alphaproteobacteria,2K6HT@204457|Sphingomonadales	204457|Sphingomonadales	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SRD3_k127_2144738_20	1449076.JOOE01000003_gene3549	9.489e-77	265.0	29CWT@1|root,2ZZUX@2|Bacteria,1REF2@1224|Proteobacteria,2U7K7@28211|Alphaproteobacteria,2K4SS@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF2585)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2585
SRD3_k127_2144738_12	1007104.SUS17_2360	4.81e-136	438.0	COG3000@1|root,COG3000@2|Bacteria,1NXAF@1224|Proteobacteria,2TRF0@28211|Alphaproteobacteria,2K0X1@204457|Sphingomonadales	204457|Sphingomonadales	I	sterol desaturase	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
SRD3_k127_2144738_24	1112216.JH594425_gene1106	1.465e-52	192.0	COG4704@1|root,COG4704@2|Bacteria,1N6RE@1224|Proteobacteria,2UH9V@28211|Alphaproteobacteria,2KCA1@204457|Sphingomonadales	204457|Sphingomonadales	S	Uncharacterized protein conserved in bacteria (DUF2141)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2141
SRD3_k127_2144738_18	1219045.BV98_001824	2.205e-81	280.0	COG3713@1|root,COG3713@2|Bacteria,1RF1U@1224|Proteobacteria,2U8SJ@28211|Alphaproteobacteria,2K4FB@204457|Sphingomonadales	204457|Sphingomonadales	M	MltA-interacting protein MipA	-	-	-	-	-	-	-	-	-	-	-	-	MipA
SRD3_k127_2144738_19	1112212.JH584235_gene2563	2.526e-79	276.0	COG1633@1|root,COG1633@2|Bacteria,1R92T@1224|Proteobacteria,2U5FE@28211|Alphaproteobacteria,2K276@204457|Sphingomonadales	204457|Sphingomonadales	S	Ferritin-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Ferritin_2
SRD3_k127_2144738_17	1112214.AHIS01000068_gene3197	8.882e-89	304.0	COG1633@1|root,COG1633@2|Bacteria,1R8NN@1224|Proteobacteria,2VG99@28211|Alphaproteobacteria,2KE28@204457|Sphingomonadales	204457|Sphingomonadales	S	Ferritin-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Ferritin_2
SRD3_k127_2144738_6	1112212.JH584235_gene2561	4.384e-273	843.0	COG0422@1|root,COG0422@2|Bacteria,1MUVV@1224|Proteobacteria,2TS0S@28211|Alphaproteobacteria,2JZYN@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction	thiC	-	4.1.99.17	ko:K03147	ko00730,ko01100,map00730,map01100	M00127	R03472	RC03251,RC03252	ko00000,ko00001,ko00002,ko01000	-	-	-	ThiC-associated,ThiC_Rad_SAM
SRD3_k127_2174323_2	1230476.C207_03808	9.78e-99	327.0	COG1028@1|root,COG1028@2|Bacteria,1R413@1224|Proteobacteria,2U3B2@28211|Alphaproteobacteria,3K5YB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SRD3_k127_2174323_4	395963.Bind_0187	5.919e-58	207.0	COG1309@1|root,COG1309@2|Bacteria,1RA4T@1224|Proteobacteria,2U0G2@28211|Alphaproteobacteria,3NCKR@45404|Beijerinckiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	ko:K16137	-	-	-	-	ko00000,ko03000	-	-	-	TetR_C_13,TetR_N
SRD3_k127_2174323_3	1112216.JH594425_gene3420	5.332e-70	239.0	COG1846@1|root,COG1846@2|Bacteria,1N1CJ@1224|Proteobacteria,2UCHN@28211|Alphaproteobacteria,2K5C8@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SRD3_k127_2174323_0	1112212.JH584235_gene803	0.0	1168.0	COG2225@1|root,COG2225@2|Bacteria,1MVEV@1224|Proteobacteria,2TS9R@28211|Alphaproteobacteria,2K0KC@204457|Sphingomonadales	204457|Sphingomonadales	C	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA	glcB	-	2.3.3.9	ko:K01638	ko00620,ko00630,ko01100,ko01110,ko01120,ko01200,map00620,map00630,map01100,map01110,map01120,map01200	M00012	R00472	RC00004,RC00308,RC02747	ko00000,ko00001,ko00002,ko01000	-	-	-	Malate_synthase
SRD3_k127_2174323_1	1112212.JH584235_gene800	1.633e-186	586.0	COG2072@1|root,COG2072@2|Bacteria,1MU71@1224|Proteobacteria,2TV2E@28211|Alphaproteobacteria,2JZVQ@204457|Sphingomonadales	204457|Sphingomonadales	P	Flavin-binding monooxygenase-like	-	-	-	-	-	-	-	-	-	-	-	-	FMO-like,NAD_binding_8,Pyr_redox_3
SRD3_k127_217455_5	394221.Mmar10_1301	2.788e-22	100.0	2EATF@1|root,33ZAA@2|Bacteria,1NXQ7@1224|Proteobacteria,2USTB@28211|Alphaproteobacteria,43YXP@69657|Hyphomonadaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_217455_3	1282361.ABAC402_02090	6.589e-39	151.0	COG1846@1|root,COG1846@2|Bacteria,1N5XF@1224|Proteobacteria,2UDU7@28211|Alphaproteobacteria,2KH1I@204458|Caulobacterales	204458|Caulobacterales	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_34
SRD3_k127_217455_4	717785.HYPMC_1234	5.708e-26	115.0	COG2963@1|root,COG2963@2|Bacteria,1N24I@1224|Proteobacteria,2UGNR@28211|Alphaproteobacteria	28211|Alphaproteobacteria	L	transposase activity	-	-	-	-	-	-	-	-	-	-	-	-	HTH_23
SRD3_k127_217455_0	1549858.MC45_17210	5.229e-280	869.0	COG2268@1|root,COG2268@2|Bacteria,1P50K@1224|Proteobacteria,2TTVY@28211|Alphaproteobacteria,2K0BQ@204457|Sphingomonadales	204457|Sphingomonadales	S	Flotillin	-	-	-	-	-	-	-	-	-	-	-	-	Band_7,Flot
SRD3_k127_217455_1	1379701.JPJC01000013_gene274	3.202e-83	282.0	COG1585@1|root,COG1585@2|Bacteria,1RG29@1224|Proteobacteria,2U37H@28211|Alphaproteobacteria,2K4TH@204457|Sphingomonadales	204457|Sphingomonadales	OU	Protein of unknown function (DUF1449)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1449
SRD3_k127_217455_2	1112216.JH594425_gene1871	2.208e-78	263.0	COG0596@1|root,COG0596@2|Bacteria,1R84S@1224|Proteobacteria,2U3BW@28211|Alphaproteobacteria,2K12U@204457|Sphingomonadales	204457|Sphingomonadales	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
SRD3_k127_2185183_2	1470591.BW41_00531	5.526e-85	287.0	2C3QV@1|root,2Z7YP@2|Bacteria,1MXAM@1224|Proteobacteria,2U1FE@28211|Alphaproteobacteria,2K063@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Alginate_exp
SRD3_k127_2185183_1	1449076.JOOE01000002_gene1045	4.006e-223	698.0	COG0475@1|root,COG0475@2|Bacteria,1MVGV@1224|Proteobacteria,2TUCH@28211|Alphaproteobacteria,2K24B@204457|Sphingomonadales	204457|Sphingomonadales	P	Sodium/hydrogen exchanger family	-	-	-	-	-	-	-	-	-	-	-	-	Na_H_Exchanger
SRD3_k127_2185183_5	509190.Cseg_1563	3.882e-31	123.0	COG2161@1|root,COG2161@2|Bacteria,1N8EM@1224|Proteobacteria,2UFZH@28211|Alphaproteobacteria,2KJ99@204458|Caulobacterales	204458|Caulobacterales	D	Antitoxin component of a toxin-antitoxin (TA) module	-	-	-	-	-	-	-	-	-	-	-	-	PhdYeFM_antitox
SRD3_k127_2185183_3	366602.Caul_3556	3.65e-67	237.0	COG1487@1|root,COG1487@2|Bacteria,1RIB5@1224|Proteobacteria,2UAIV@28211|Alphaproteobacteria,2KISW@204458|Caulobacterales	204458|Caulobacterales	S	PIN domain	-	-	-	ko:K07062	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	PIN
SRD3_k127_2185183_0	1449049.JONW01000001_gene3460	1.032e-260	810.0	COG0665@1|root,COG0665@2|Bacteria,1MU40@1224|Proteobacteria,2TTKE@28211|Alphaproteobacteria,2KHTW@204458|Caulobacterales	204458|Caulobacterales	E	Tryptophan halogenase	-	-	-	-	-	-	-	-	-	-	-	-	Trp_halogenase
SRD3_k127_2185183_4	1242864.D187_003617	4.289e-57	203.0	COG3791@1|root,COG3791@2|Bacteria	2|Bacteria	S	Glutathione-dependent formaldehyde-activating	-	-	-	-	-	-	-	-	-	-	-	-	GFA
SRD3_k127_2185183_6	1174684.EBMC1_16414	6.696e-21	97.0	COG4719@1|root,COG4719@2|Bacteria,1RARY@1224|Proteobacteria,2U6NU@28211|Alphaproteobacteria,2K437@204457|Sphingomonadales	204457|Sphingomonadales	S	TIGRFAM conserved repeat domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF11
SRD3_k127_2194367_13	1449076.JOOE01000001_gene1764	6.814e-78	265.0	COG0534@1|root,COG0534@2|Bacteria,1MVRV@1224|Proteobacteria,2U34G@28211|Alphaproteobacteria,2K0GZ@204457|Sphingomonadales	204457|Sphingomonadales	V	Na -driven multidrug efflux pump	-	-	-	-	-	-	-	-	-	-	-	-	MatE
SRD3_k127_2194367_6	1112216.JH594425_gene3208	1.185e-188	594.0	COG0113@1|root,COG0113@2|Bacteria,1MWMW@1224|Proteobacteria,2TS3F@28211|Alphaproteobacteria,2K011@204457|Sphingomonadales	204457|Sphingomonadales	H	Belongs to the ALAD family	hemB	-	4.2.1.24	ko:K01698	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R00036	RC00918,RC01781	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ALAD
SRD3_k127_2194367_14	502025.Hoch_4398	8.809e-62	226.0	COG1670@1|root,COG1670@2|Bacteria,1N18Y@1224|Proteobacteria,435YY@68525|delta/epsilon subdivisions,2X0G7@28221|Deltaproteobacteria,2Z0UB@29|Myxococcales	28221|Deltaproteobacteria	J	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3
SRD3_k127_2194367_2	1112212.JH584235_gene3797	3.6e-313	976.0	COG0421@1|root,COG0421@2|Bacteria,1N1PJ@1224|Proteobacteria,2TUJQ@28211|Alphaproteobacteria,2K0FC@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2194367_19	627192.SLG_25680	6.265e-26	108.0	COG0607@1|root,32YCZ@2|Bacteria,1N6NN@1224|Proteobacteria,2UFC1@28211|Alphaproteobacteria,2K66Y@204457|Sphingomonadales	204457|Sphingomonadales	P	Protein of unknown function (DUF2892)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2892
SRD3_k127_2194367_4	1174684.EBMC1_09594	5.311e-224	700.0	COG0446@1|root,COG0446@2|Bacteria,1QSG6@1224|Proteobacteria,2TUP1@28211|Alphaproteobacteria,2K2NT@204457|Sphingomonadales	204457|Sphingomonadales	S	Pyridine nucleotide-disulphide oxidoreductase	-	-	1.8.5.4	ko:K17218	ko00920,map00920	-	R10152	RC03155	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2
SRD3_k127_2194367_18	391600.ABRU01000025_gene1245	2.465e-38	146.0	COG0607@1|root,COG0607@2|Bacteria,1N2R7@1224|Proteobacteria,2U9G7@28211|Alphaproteobacteria,2KH63@204458|Caulobacterales	204458|Caulobacterales	P	Rhodanese Homology Domain	-	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
SRD3_k127_2194367_12	1174684.EBMC1_09584	4.121e-98	331.0	COG0845@1|root,COG0845@2|Bacteria,1MXU4@1224|Proteobacteria,2TUXB@28211|Alphaproteobacteria,2K3AT@204457|Sphingomonadales	204457|Sphingomonadales	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	-	-	-	-	-	-	-	-	-	HlyD_D23
SRD3_k127_2194367_0	1174684.EBMC1_09579	0.0	1628.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,2KCZ7@204457|Sphingomonadales	204457|Sphingomonadales	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
SRD3_k127_2194367_20	1122612.AUBA01000004_gene554	2.609e-24	105.0	COG0640@1|root,COG0640@2|Bacteria,1N72Q@1224|Proteobacteria,2UFSY@28211|Alphaproteobacteria,2K7PD@204457|Sphingomonadales	204457|Sphingomonadales	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	-	-	-	-	-	-	-	-	-	HTH_5
SRD3_k127_2194367_8	1449076.JOOE01000002_gene697	3.796e-162	516.0	COG2220@1|root,COG2220@2|Bacteria,1MVP2@1224|Proteobacteria,2U2W2@28211|Alphaproteobacteria,2KAFY@204457|Sphingomonadales	204457|Sphingomonadales	S	Beta-lactamase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2194367_10	509190.Cseg_2430	1.64e-120	394.0	COG1075@1|root,COG1075@2|Bacteria,1R5UQ@1224|Proteobacteria,2U0YT@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
SRD3_k127_2194367_9	1449076.JOOE01000002_gene699	1.728e-156	496.0	COG0693@1|root,COG0693@2|Bacteria,1MVTT@1224|Proteobacteria,2TT0C@28211|Alphaproteobacteria,2K2XD@204457|Sphingomonadales	204457|Sphingomonadales	S	DJ-1/PfpI family	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI
SRD3_k127_2194367_15	1449076.JOOE01000002_gene700	1.166e-46	171.0	COG1359@1|root,COG1359@2|Bacteria,1NGPW@1224|Proteobacteria,2UK00@28211|Alphaproteobacteria,2K6WQ@204457|Sphingomonadales	204457|Sphingomonadales	S	PFAM Antibiotic biosynthesis monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	ABM
SRD3_k127_2194367_7	1211777.BN77_p10726	8.365e-175	548.0	COG2267@1|root,COG2267@2|Bacteria,1MUG8@1224|Proteobacteria,2U1XY@28211|Alphaproteobacteria,4BDD3@82115|Rhizobiaceae	28211|Alphaproteobacteria	I	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_4
SRD3_k127_2194367_3	1449076.JOOE01000002_gene702	6.081e-306	968.0	COG3292@1|root,COG4585@1|root,COG3292@2|Bacteria,COG4585@2|Bacteria,1QUYA@1224|Proteobacteria,2U0BQ@28211|Alphaproteobacteria,2K313@204457|Sphingomonadales	28211|Alphaproteobacteria	T	Y_Y_Y domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,Reg_prop,Y_Y_Y
SRD3_k127_2194367_11	1449076.JOOE01000002_gene703	2.313e-119	386.0	COG2197@1|root,COG2197@2|Bacteria,1MWGM@1224|Proteobacteria,2UPJD@28211|Alphaproteobacteria,2KCQ6@204457|Sphingomonadales	28211|Alphaproteobacteria	KT	helix_turn_helix, Lux Regulon	-	-	-	ko:K07684	ko02020,map02020	M00471	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	GerE,Response_reg
SRD3_k127_2194367_17	1028800.RG540_CH27040	5.791e-39	154.0	COG3710@1|root,COG3903@1|root,COG3710@2|Bacteria,COG3903@2|Bacteria,1MWPD@1224|Proteobacteria,2TQQR@28211|Alphaproteobacteria,4BAW7@82115|Rhizobiaceae	28211|Alphaproteobacteria	K	Transcriptional regulatory protein, C terminal	-	-	-	-	-	-	-	-	-	-	-	-	Trans_reg_C
SRD3_k127_2194367_16	1112214.AHIS01000097_gene1349	1.439e-40	158.0	2AEQS@1|root,314MB@2|Bacteria,1NUED@1224|Proteobacteria,2URNN@28211|Alphaproteobacteria,2K5J2@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2194367_5	1112216.JH594425_gene1207	2.14e-195	617.0	COG1228@1|root,COG1228@2|Bacteria,1MVAF@1224|Proteobacteria,2TTYC@28211|Alphaproteobacteria,2K0Q2@204457|Sphingomonadales	204457|Sphingomonadales	Q	COG1228 Imidazolonepropionase and related amidohydrolases	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
SRD3_k127_2194367_1	1112214.AHIS01000083_gene3605	7.592e-315	977.0	COG4206@1|root,COG4206@2|Bacteria,1R1WX@1224|Proteobacteria,2U0GK@28211|Alphaproteobacteria,2K1DC@204457|Sphingomonadales	204457|Sphingomonadales	H	receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SRD3_k127_2203232_1	1144305.PMI02_02324	1.314e-193	627.0	COG1629@1|root,COG4771@2|Bacteria,1MVFB@1224|Proteobacteria,2U2KS@28211|Alphaproteobacteria,2KDKA@204457|Sphingomonadales	204457|Sphingomonadales	P	TonB-dependent receptor plug	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SRD3_k127_2203232_0	392499.Swit_4612	3.919e-253	797.0	COG1680@1|root,COG1680@2|Bacteria,1PQ2Z@1224|Proteobacteria,2U1GN@28211|Alphaproteobacteria,2K210@204457|Sphingomonadales	204457|Sphingomonadales	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SRD3_k127_2203232_2	392499.Swit_4613	9.39e-112	365.0	COG3104@1|root,COG3104@2|Bacteria,1MW6W@1224|Proteobacteria,2U15C@28211|Alphaproteobacteria,2K2WX@204457|Sphingomonadales	204457|Sphingomonadales	E	amino acid peptide transporter	-	-	-	ko:K03305	-	-	-	-	ko00000	2.A.17	-	-	PTR2
SRD3_k127_2210779_6	1470591.BW41_00044	2.252e-214	671.0	COG0505@1|root,COG0505@2|Bacteria,1MUB9@1224|Proteobacteria,2TR3W@28211|Alphaproteobacteria,2K02X@204457|Sphingomonadales	204457|Sphingomonadales	F	Belongs to the CarA family	carA	-	6.3.5.5	ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R00256,R00575,R01395,R10948,R10949	RC00002,RC00010,RC00043,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000	-	-	-	CPSase_sm_chain,GATase
SRD3_k127_2210779_10	1112212.JH584235_gene3671	3.653e-73	249.0	COG1610@1|root,COG1610@2|Bacteria,1RGZS@1224|Proteobacteria,2U7DJ@28211|Alphaproteobacteria,2K3W5@204457|Sphingomonadales	204457|Sphingomonadales	S	Yqey-like protein	-	-	-	ko:K09117	-	-	-	-	ko00000	-	-	-	YqeY
SRD3_k127_2210779_14	1112214.AHIS01000078_gene3481	2.644e-48	179.0	COG2852@1|root,COG2852@2|Bacteria,1N0QU@1224|Proteobacteria,2UFZ7@28211|Alphaproteobacteria,2K5GA@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF559)	-	-	-	-	-	-	-	-	-	-	-	-	DUF559
SRD3_k127_2210779_2	1112216.JH594425_gene3110	4.622e-317	979.0	COG0358@1|root,COG0358@2|Bacteria,1MUHC@1224|Proteobacteria,2TRU2@28211|Alphaproteobacteria,2K0VR@204457|Sphingomonadales	204457|Sphingomonadales	L	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	dnaG	-	-	ko:K02316	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	Toprim_4,Toprim_N,zf-CHC2
SRD3_k127_2210779_0	1112216.JH594425_gene3111	0.0	1133.0	COG0568@1|root,COG0568@2|Bacteria,1MVNJ@1224|Proteobacteria,2TS6C@28211|Alphaproteobacteria,2K260@204457|Sphingomonadales	204457|Sphingomonadales	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth	rpoD	-	-	ko:K03086	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_ner,Sigma70_r1_1,Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4
SRD3_k127_2210779_12	999541.bgla_2g17970	4.075e-53	203.0	COG1835@1|root,COG1835@2|Bacteria,1N1UP@1224|Proteobacteria,2W7I9@28216|Betaproteobacteria,1K30P@119060|Burkholderiaceae	28216|Betaproteobacteria	I	PFAM acyltransferase 3	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
SRD3_k127_2210779_18	1096930.L284_20075	0.0008741	42.0	COG0568@1|root,COG0568@2|Bacteria,1MVNJ@1224|Proteobacteria,2TS6C@28211|Alphaproteobacteria,2K260@204457|Sphingomonadales	204457|Sphingomonadales	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth	rpoD	-	-	ko:K03086	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_ner,Sigma70_r1_1,Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4
SRD3_k127_2210779_11	1449076.JOOE01000001_gene1870	1.083e-69	244.0	29636@1|root,2ZTDK@2|Bacteria,1RFN7@1224|Proteobacteria,2U8TB@28211|Alphaproteobacteria,2K5I9@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2210779_7	1379701.JPJC01000091_gene1250	4.581e-177	557.0	COG0714@1|root,COG0714@2|Bacteria,1MV5I@1224|Proteobacteria,2TRI8@28211|Alphaproteobacteria,2JZXF@204457|Sphingomonadales	204457|Sphingomonadales	S	ATPase AAA	-	-	-	-	-	-	-	-	-	-	-	-	AAA
SRD3_k127_2210779_8	1112212.JH584235_gene3664	1.171e-84	284.0	COG3942@1|root,COG3942@2|Bacteria,1N0K8@1224|Proteobacteria,2UDGN@28211|Alphaproteobacteria,2K423@204457|Sphingomonadales	204457|Sphingomonadales	S	CHAP domain	-	-	-	-	-	-	-	-	-	-	-	-	CHAP
SRD3_k127_2210779_9	1198114.AciX9_3588	2.26e-75	263.0	COG0500@1|root,COG2226@2|Bacteria,3Y823@57723|Acidobacteria,2JNK9@204432|Acidobacteriia	204432|Acidobacteriia	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2210779_4	1112216.JH594425_gene3116	5.182e-243	754.0	COG3825@1|root,COG3825@2|Bacteria,1MUAJ@1224|Proteobacteria,2TS5P@28211|Alphaproteobacteria,2K0XS@204457|Sphingomonadales	204457|Sphingomonadales	S	Von Willebrand factor A	-	-	-	ko:K09989	-	-	-	-	ko00000	-	-	-	VWA_CoxE
SRD3_k127_2210779_5	1112214.AHIS01000078_gene3471	1.92e-233	725.0	COG3876@1|root,COG3876@2|Bacteria,1MX3S@1224|Proteobacteria,2U1KM@28211|Alphaproteobacteria,2K0PB@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF1343)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1343
SRD3_k127_2210779_16	1112214.AHIS01000078_gene3470	8.123e-38	151.0	2C0PI@1|root,32VVI@2|Bacteria,1N1H7@1224|Proteobacteria,2UE1P@28211|Alphaproteobacteria,2K60G@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2210779_15	1112212.JH584235_gene3130	8.671e-43	158.0	COG2827@1|root,COG2827@2|Bacteria,1MZME@1224|Proteobacteria,2UCNX@28211|Alphaproteobacteria,2K68E@204457|Sphingomonadales	204457|Sphingomonadales	L	endonuclease containing a URI domain	-	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
SRD3_k127_2210779_3	1112214.AHIS01000078_gene3468	2.333e-261	810.0	COG0621@1|root,COG0621@2|Bacteria,1MU7N@1224|Proteobacteria,2TQUS@28211|Alphaproteobacteria,2K1QA@204457|Sphingomonadales	204457|Sphingomonadales	J	Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12	rimO	-	2.8.4.4	ko:K14441	-	-	R10652	RC00003,RC03217	ko00000,ko01000,ko03009	-	-	-	Radical_SAM,TRAM,UPF0004
SRD3_k127_2210779_1	13689.BV96_00546	0.0	1045.0	COG4993@1|root,COG4993@2|Bacteria,1MUQX@1224|Proteobacteria,2TQMV@28211|Alphaproteobacteria,2K0W1@204457|Sphingomonadales	204457|Sphingomonadales	G	Glucose dehydrogenase	-	-	1.1.5.2	ko:K00117	ko00030,ko01100,ko01110,ko01130,map00030,map01100,map01110,map01130	-	R06620	RC00066	ko00000,ko00001,ko01000	-	-	-	PQQ,PQQ_2
SRD3_k127_2210779_17	555079.Toce_1504	1.044e-17	85.0	COG1828@1|root,COG1828@2|Bacteria,1VEH1@1239|Firmicutes,24R3W@186801|Clostridia,42H8G@68295|Thermoanaerobacterales	186801|Clostridia	F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL	purS	-	6.3.5.3	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04463	RC00010,RC01160	ko00000,ko00001,ko00002,ko01000	-	-	-	PurS
SRD3_k127_2211255_3	702113.PP1Y_AT15235	1.083e-54	194.0	COG4959@1|root,COG4959@2|Bacteria,1N8IF@1224|Proteobacteria,2UD9M@28211|Alphaproteobacteria,2K43X@204457|Sphingomonadales	204457|Sphingomonadales	OU	Signal peptidase, peptidase S26	-	-	-	ko:K12062	-	-	-	-	ko00000,ko02044	3.A.7.11.1	-	-	Peptidase_S26
SRD3_k127_2211255_1	279238.Saro_2166	2.18e-91	306.0	2CGUX@1|root,31QWG@2|Bacteria,1N1MK@1224|Proteobacteria,2UCMG@28211|Alphaproteobacteria,2K2C7@204457|Sphingomonadales	204457|Sphingomonadales	S	Conjugal transfer protein TraW	-	-	-	ko:K12061	-	-	-	-	ko00000,ko02044	3.A.7.11.1	-	-	-
SRD3_k127_2211255_0	158500.BV97_03732	1.587e-206	646.0	28HGF@1|root,2Z7SA@2|Bacteria,1MXUA@1224|Proteobacteria,2U2HG@28211|Alphaproteobacteria,2K2IX@204457|Sphingomonadales	204457|Sphingomonadales	S	Conjugal transfer protein	-	-	-	ko:K12060	-	-	-	-	ko00000,ko02044	3.A.7.11.1	-	-	TraU
SRD3_k127_2211255_2	1088721.NSU_0110	1.708e-78	269.0	2CIAZ@1|root,2Z7YC@2|Bacteria,1R62Q@1224|Proteobacteria,2UNX1@28211|Alphaproteobacteria,2K9T2@204457|Sphingomonadales	204457|Sphingomonadales	S	Type-F conjugative transfer system pilin assembly protein	-	-	-	ko:K12059	-	-	-	-	ko00000,ko02044	3.A.7.11.1	-	-	TrbC_Ftype
SRD3_k127_2214323_13	1112214.AHIS01000031_gene1131	8.723e-121	391.0	COG0454@1|root,COG0456@2|Bacteria,1PMA3@1224|Proteobacteria,2TUU2@28211|Alphaproteobacteria,2K0BS@204457|Sphingomonadales	204457|Sphingomonadales	K	acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2214323_9	1449076.JOOE01000001_gene2629	8.629e-160	523.0	COG3239@1|root,COG3239@2|Bacteria,1MVY5@1224|Proteobacteria,2U156@28211|Alphaproteobacteria,2K0CR@204457|Sphingomonadales	204457|Sphingomonadales	I	Fatty acid desaturase	-	-	-	-	-	-	-	-	-	-	-	-	FA_desaturase
SRD3_k127_2214323_16	1278073.MYSTI_04762	5.215e-75	264.0	COG0596@1|root,COG0596@2|Bacteria	2|Bacteria	S	hydrolase activity, acting on ester bonds	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6
SRD3_k127_2214323_11	1449076.JOOE01000003_gene3283	1.042e-132	435.0	COG0477@1|root,COG2814@2|Bacteria,1RB5E@1224|Proteobacteria	1224|Proteobacteria	EGP	Major Facilitator	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,MFS_1_like,MFS_3,Sugar_tr
SRD3_k127_2214323_4	1449076.JOOE01000003_gene3284	1.912e-213	671.0	COG1167@1|root,COG1167@2|Bacteria,1MVGT@1224|Proteobacteria,2TRK7@28211|Alphaproteobacteria,2K12B@204457|Sphingomonadales	204457|Sphingomonadales	K	aminotransferase class I and II	-	-	-	ko:K00375	-	-	-	-	ko00000,ko03000	-	-	-	Aminotran_1_2,GntR
SRD3_k127_2214323_8	1112212.JH584235_gene1369	2.272e-175	567.0	COG0795@1|root,COG0795@2|Bacteria,1MVW3@1224|Proteobacteria,2TR76@28211|Alphaproteobacteria,2K1ZM@204457|Sphingomonadales	204457|Sphingomonadales	S	YjgP YjgQ family	-	-	-	ko:K11720	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko02000	1.B.42.1	-	-	YjgP_YjgQ
SRD3_k127_2214323_6	1112214.AHIS01000063_gene2721	4.878e-186	588.0	COG0795@1|root,COG0795@2|Bacteria,1MUF2@1224|Proteobacteria,2U55Q@28211|Alphaproteobacteria,2K07C@204457|Sphingomonadales	204457|Sphingomonadales	S	YjgP YjgQ family	-	-	-	ko:K07091	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko02000	1.B.42.1	-	-	YjgP_YjgQ
SRD3_k127_2214323_3	1549858.MC45_07610	6.445e-227	722.0	COG4191@1|root,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TQQ9@28211|Alphaproteobacteria,2K01C@204457|Sphingomonadales	204457|Sphingomonadales	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	CHASE3,HATPase_c,HisKA,Response_reg
SRD3_k127_2214323_2	1449076.JOOE01000001_gene2621	1.062e-231	721.0	COG0156@1|root,COG0156@2|Bacteria,1MVVH@1224|Proteobacteria,2TQYP@28211|Alphaproteobacteria,2K0V8@204457|Sphingomonadales	204457|Sphingomonadales	E	COG0156 7-keto-8-aminopelargonate synthetase and related enzymes	-	-	2.3.1.29,2.3.1.47	ko:K00639,ko:K00652	ko00260,ko00780,ko01100,map00260,map00780,map01100	M00123,M00573,M00577	R00371,R03210,R10124	RC00004,RC00039,RC00394,RC02725	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
SRD3_k127_2214323_21	1379701.JPJC01000242_gene1060	1.395e-37	143.0	COG0236@1|root,COG0236@2|Bacteria,1NHQD@1224|Proteobacteria,2UGSG@28211|Alphaproteobacteria,2K5YB@204457|Sphingomonadales	204457|Sphingomonadales	IQ	acyl carrier protein	-	-	-	-	-	-	-	-	-	-	-	-	PP-binding
SRD3_k127_2214323_12	1112212.JH584235_gene1364	1.908e-127	415.0	COG0702@1|root,COG0702@2|Bacteria,1RCCP@1224|Proteobacteria,2TU1D@28211|Alphaproteobacteria,2K0TF@204457|Sphingomonadales	204457|Sphingomonadales	GM	epimerase	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_10
SRD3_k127_2214323_7	1112212.JH584235_gene1363	2.672e-179	568.0	COG0263@1|root,COG0263@2|Bacteria,1MUBG@1224|Proteobacteria,2TRKB@28211|Alphaproteobacteria,2K0DF@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate	proB	-	2.7.2.11	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	M00015	R00239	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase,PUA
SRD3_k127_2214323_5	1112212.JH584235_gene1361	1.512e-198	621.0	COG0536@1|root,COG0536@2|Bacteria,1MUGZ@1224|Proteobacteria,2TR5I@28211|Alphaproteobacteria,2K1GJ@204457|Sphingomonadales	204457|Sphingomonadales	S	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control	obg	-	-	ko:K03979	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	GTP1_OBG,MMR_HSR1
SRD3_k127_2214323_14	1112214.AHIS01000063_gene2729	5.103e-90	299.0	COG1309@1|root,COG1309@2|Bacteria,1N2ZP@1224|Proteobacteria,2UC9P@28211|Alphaproteobacteria,2K4HW@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SRD3_k127_2214323_10	1549858.MC45_07570	3.856e-142	456.0	COG3687@1|root,COG3687@2|Bacteria,1MWGV@1224|Proteobacteria,2U1DK@28211|Alphaproteobacteria,2K0CB@204457|Sphingomonadales	204457|Sphingomonadales	S	Predicted metal-dependent hydrolase	-	-	-	ko:K07044	-	-	-	-	ko00000	-	-	-	Metal_hydrol
SRD3_k127_2214323_0	1112216.JH594425_gene1910	0.0	1262.0	COG1629@1|root,COG4771@2|Bacteria,1MUNK@1224|Proteobacteria,2TRCG@28211|Alphaproteobacteria,2K0ND@204457|Sphingomonadales	204457|Sphingomonadales	P	receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SRD3_k127_2214323_23	485913.Krac_5066	0.0003502	49.0	2FCYS@1|root,3451F@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2214323_19	1144307.PMI04_00544	1.17e-46	171.0	2DZXG@1|root,32VMH@2|Bacteria,1N50I@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2214323_22	290397.Adeh_2374	2.377e-20	101.0	2ER1F@1|root,33IKZ@2|Bacteria,1PANM@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2214323_17	1379701.JPJC01000242_gene1054	3.74e-69	242.0	COG1670@1|root,COG1670@2|Bacteria,1N6Q1@1224|Proteobacteria,2UG72@28211|Alphaproteobacteria,2K4XG@204457|Sphingomonadales	204457|Sphingomonadales	J	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3
SRD3_k127_2214323_20	1112214.AHIS01000063_gene2732	3.275e-45	164.0	COG0211@1|root,COG0211@2|Bacteria,1MZGH@1224|Proteobacteria,2UBUX@28211|Alphaproteobacteria,2K60H@204457|Sphingomonadales	204457|Sphingomonadales	J	Belongs to the bacterial ribosomal protein bL27 family	rpmA	-	-	ko:K02899	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L27
SRD3_k127_2214323_18	1112212.JH584235_gene3515	9.398e-51	193.0	COG0261@1|root,COG0261@2|Bacteria,1MZEW@1224|Proteobacteria,2UBT3@28211|Alphaproteobacteria,2K5A0@204457|Sphingomonadales	204457|Sphingomonadales	J	This protein binds to 23S rRNA in the presence of protein L20	rplU	-	-	ko:K02888	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L21p
SRD3_k127_2214323_15	1123269.NX02_13980	2.912e-82	284.0	COG0454@1|root,COG0456@2|Bacteria,1QWA8@1224|Proteobacteria,2TWUD@28211|Alphaproteobacteria,2K4N3@204457|Sphingomonadales	204457|Sphingomonadales	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10
SRD3_k127_2214323_1	1112214.AHIS01000063_gene2734	2.348e-295	915.0	COG1629@1|root,COG4771@2|Bacteria,1MUNK@1224|Proteobacteria,2TRCG@28211|Alphaproteobacteria,2K0ND@204457|Sphingomonadales	204457|Sphingomonadales	P	receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SRD3_k127_2217368_6	1112216.JH594425_gene2289	9.496e-83	276.0	COG0218@1|root,COG0218@2|Bacteria,1MY3Z@1224|Proteobacteria,2U5E5@28211|Alphaproteobacteria,2K0SN@204457|Sphingomonadales	204457|Sphingomonadales	D	Necessary for normal cell division and for the maintenance of normal septation	engB	-	-	ko:K03978	-	-	-	-	ko00000,ko03036	-	-	-	MMR_HSR1
SRD3_k127_2217368_9	196490.AUEZ01000030_gene4408	3.477e-72	251.0	COG0454@1|root,COG0454@2|Bacteria,1QU5Y@1224|Proteobacteria	1224|Proteobacteria	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
SRD3_k127_2217368_8	1304275.C41B8_02627	3.984e-74	255.0	COG1584@1|root,COG1584@2|Bacteria,1N3HP@1224|Proteobacteria,1RMRK@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	GPR1 FUN34 yaaH family protein	yaaH	GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006835,GO:0006846,GO:0006855,GO:0008028,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015077,GO:0015078,GO:0015123,GO:0015238,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015355,GO:0015360,GO:0015672,GO:0015711,GO:0015718,GO:0015740,GO:0015744,GO:0015849,GO:0015893,GO:0016020,GO:0022804,GO:0022857,GO:0022890,GO:0034220,GO:0035433,GO:0042221,GO:0042493,GO:0042891,GO:0042895,GO:0043893,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071422,GO:0071702,GO:0071944,GO:0098655,GO:0098656,GO:0098660,GO:0098662,GO:1902600,GO:1903825,GO:1905039	-	ko:K07034	-	-	-	-	ko00000	-	-	-	Grp1_Fun34_YaaH
SRD3_k127_2217368_5	1112212.JH584235_gene3468	3.239e-128	416.0	COG0625@1|root,COG0625@2|Bacteria,1PHM1@1224|Proteobacteria,2TTQZ@28211|Alphaproteobacteria,2K0C9@204457|Sphingomonadales	204457|Sphingomonadales	O	Glutathione S-transferase	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C_2,GST_N_2,GST_N_3
SRD3_k127_2217368_7	1449076.JOOE01000002_gene1151	3.913e-78	273.0	COG3837@1|root,COG3837@2|Bacteria,1R9WZ@1224|Proteobacteria,2UBTS@28211|Alphaproteobacteria,2KD9T@204457|Sphingomonadales	204457|Sphingomonadales	S	Cupin domain	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
SRD3_k127_2217368_2	1550073.JROH01000005_gene1652	5.926e-187	590.0	COG0624@1|root,COG0624@2|Bacteria,1MW6G@1224|Proteobacteria,2TT0J@28211|Alphaproteobacteria,2K0C3@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls	dapE	-	3.5.1.18	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	M00016	R02734	RC00064,RC00090	ko00000,ko00001,ko00002,ko01000	-	-	-	M20_dimer,Peptidase_M20
SRD3_k127_2217368_1	1112212.JH584235_gene3465	1.083e-215	672.0	COG2940@1|root,COG2940@2|Bacteria,1Q9DE@1224|Proteobacteria,2VDKT@28211|Alphaproteobacteria,2K32C@204457|Sphingomonadales	204457|Sphingomonadales	S	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain	-	-	-	ko:K07117	-	-	-	-	ko00000	-	-	-	SET
SRD3_k127_2217368_0	1112212.JH584235_gene3464	0.0	1143.0	COG4191@1|root,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TQQ9@28211|Alphaproteobacteria,2K01C@204457|Sphingomonadales	204457|Sphingomonadales	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	GAF,HATPase_c,HisKA,PAS_3,Response_reg
SRD3_k127_2217368_3	1112212.JH584235_gene3463	1.292e-183	581.0	2DC9S@1|root,2ZDD0@2|Bacteria,1R9FC@1224|Proteobacteria,2TU5E@28211|Alphaproteobacteria,2K25Q@204457|Sphingomonadales	204457|Sphingomonadales	S	Indoleamine 2,3-dioxygenase	-	-	1.13.11.52	ko:K00463	ko00380,ko01100,ko05143,map00380,map01100,map05143	M00038	R00678,R02702,R02909,R03628	RC00356	ko00000,ko00001,ko00002,ko01000	-	-	-	IDO
SRD3_k127_2217368_4	1112214.AHIS01000022_gene1310	3.758e-141	449.0	COG0498@1|root,COG0498@2|Bacteria,1R7X1@1224|Proteobacteria,2TUR3@28211|Alphaproteobacteria,2K0P7@204457|Sphingomonadales	204457|Sphingomonadales	E	Threonine synthase	-	-	4.2.3.1	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	M00018	R01466,R05086	RC00017,RC00526	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
SRD3_k127_2221735_4	1112214.AHIS01000047_gene2014	1.041e-65	236.0	COG5455@1|root,COG5455@2|Bacteria,1N92K@1224|Proteobacteria,2UHG8@28211|Alphaproteobacteria,2K55J@204457|Sphingomonadales	204457|Sphingomonadales	S	Nickel/cobalt transporter regulator	-	-	-	-	-	-	-	-	-	-	-	-	DUF1090,RcnB
SRD3_k127_2221735_5	1112212.JH584235_gene2409	4.654e-65	228.0	COG2913@1|root,COG2913@2|Bacteria,1RHYM@1224|Proteobacteria,2UBU9@28211|Alphaproteobacteria,2K4H5@204457|Sphingomonadales	204457|Sphingomonadales	J	Small protein A (tmRNA-binding)	-	-	-	-	-	-	-	-	-	-	-	-	SmpA_OmlA
SRD3_k127_2221735_3	1112212.JH584235_gene2410	4.925e-68	234.0	COG5452@1|root,COG5452@2|Bacteria,1N12T@1224|Proteobacteria,2UCES@28211|Alphaproteobacteria,2K5B4@204457|Sphingomonadales	204457|Sphingomonadales	S	Ubiquinol-cytochrome C chaperone	-	-	-	ko:K17662	-	-	-	-	ko00000,ko03029	-	-	-	Ubiq_cyt_C_chap
SRD3_k127_2221735_2	1112216.JH594425_gene939	4.483e-72	249.0	COG1399@1|root,COG1399@2|Bacteria,1N7C2@1224|Proteobacteria,2UC4J@28211|Alphaproteobacteria,2K4K6@204457|Sphingomonadales	204457|Sphingomonadales	S	Uncharacterized ACR, COG1399	-	-	-	-	-	-	-	-	-	-	-	-	DUF177
SRD3_k127_2221735_1	1449076.JOOE01000003_gene3688	3.29e-76	259.0	COG2062@1|root,COG2062@2|Bacteria,1N0FX@1224|Proteobacteria,2UBYD@28211|Alphaproteobacteria,2K4JB@204457|Sphingomonadales	204457|Sphingomonadales	T	phosphohistidine phosphatase	sixA	-	-	ko:K08296	-	-	-	-	ko00000,ko01000	-	-	-	His_Phos_1
SRD3_k127_2221735_0	1112212.JH584235_gene2413	0.0	1474.0	COG1199@1|root,COG1199@2|Bacteria,1MVCU@1224|Proteobacteria,2TUKS@28211|Alphaproteobacteria,2K15X@204457|Sphingomonadales	204457|Sphingomonadales	KL	Helicase	dinG	-	3.6.4.12	ko:K03722	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	Helicase_C_2
SRD3_k127_2236029_5	633149.Bresu_2079	4.531e-39	150.0	COG0664@1|root,COG0664@2|Bacteria,1MXID@1224|Proteobacteria,2U1G1@28211|Alphaproteobacteria,2KJAP@204458|Caulobacterales	204458|Caulobacterales	K	Crp-like helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,cNMP_binding
SRD3_k127_2236029_4	1081640.AGFU01000042_gene3188	3.675e-99	343.0	COG2114@1|root,COG2114@2|Bacteria,1R86S@1224|Proteobacteria,2U57P@28211|Alphaproteobacteria,2K4QV@204457|Sphingomonadales	204457|Sphingomonadales	T	Pfam Adenylate and Guanylate cyclase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc
SRD3_k127_2236029_3	983920.Y88_1508	3.765e-110	366.0	COG0392@1|root,COG0392@2|Bacteria,1RF8R@1224|Proteobacteria,2U7DD@28211|Alphaproteobacteria,2K1Y5@204457|Sphingomonadales	204457|Sphingomonadales	S	Lysylphosphatidylglycerol synthase TM region	-	-	-	-	-	-	-	-	-	-	-	-	LPG_synthase_TM
SRD3_k127_2236029_1	745310.G432_09225	6.279e-152	485.0	COG1633@1|root,COG1633@2|Bacteria,1QG5X@1224|Proteobacteria,2UQ2M@28211|Alphaproteobacteria,2K3BA@204457|Sphingomonadales	204457|Sphingomonadales	S	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2236029_2	983920.Y88_1510	7.383e-112	367.0	COG3394@1|root,COG3394@2|Bacteria,1PP39@1224|Proteobacteria,2U2UW@28211|Alphaproteobacteria,2K2BD@204457|Sphingomonadales	204457|Sphingomonadales	G	hopanoid biosynthesis associated protein HpnK	-	-	-	-	-	-	-	-	-	-	-	-	YdjC
SRD3_k127_2236029_6	1030157.AFMP01000043_gene1686	9.578e-37	141.0	COG2827@1|root,COG2827@2|Bacteria,1MZME@1224|Proteobacteria,2UCNX@28211|Alphaproteobacteria,2K5XX@204457|Sphingomonadales	204457|Sphingomonadales	L	endonuclease containing a URI domain	-	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
SRD3_k127_2236029_0	1112216.JH594425_gene2116	7.834e-159	501.0	COG1032@1|root,COG1032@2|Bacteria,1MWR0@1224|Proteobacteria,2TRFJ@28211|Alphaproteobacteria,2K1JK@204457|Sphingomonadales	204457|Sphingomonadales	C	hopanoid biosynthesis associated radical SAM protein HpnJ	-	-	-	-	-	-	-	-	-	-	-	-	B12-binding,Radical_SAM
SRD3_k127_2239998_8	1379701.JPJC01000021_gene3369	4.19e-31	131.0	COG0642@1|root,COG2205@2|Bacteria,1N9SU@1224|Proteobacteria,2TWD1@28211|Alphaproteobacteria,2KBGM@204457|Sphingomonadales	204457|Sphingomonadales	T	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain	-	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
SRD3_k127_2239998_1	716928.AJQT01000049_gene2013	2.392e-95	321.0	COG0745@1|root,COG0745@2|Bacteria,1MY3D@1224|Proteobacteria,2TTKG@28211|Alphaproteobacteria	28211|Alphaproteobacteria	T	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
SRD3_k127_2239998_10	1500301.JQMF01000013_gene4536	4.368e-17	91.0	COG3678@1|root,COG3678@2|Bacteria,1N0SB@1224|Proteobacteria,2UDWY@28211|Alphaproteobacteria,4BAUZ@82115|Rhizobiaceae	28211|Alphaproteobacteria	NPTU	LTXXQ motif family protein	-	-	-	-	-	-	-	-	-	-	-	-	LTXXQ,Metal_resist
SRD3_k127_2239998_0	1112212.JH584235_gene3665	8.613e-316	981.0	COG3119@1|root,COG3119@2|Bacteria,1MV0B@1224|Proteobacteria,2TRI6@28211|Alphaproteobacteria,2KB25@204457|Sphingomonadales	204457|Sphingomonadales	P	Sulfatase	-	-	-	-	-	-	-	-	-	-	-	-	Sulfatase
SRD3_k127_2239998_9	1112214.AHIS01000077_gene3829	3.957e-23	107.0	2BUNM@1|root,32PZI@2|Bacteria,1NR47@1224|Proteobacteria,2UR0D@28211|Alphaproteobacteria,2K5U7@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2239998_7	344747.PM8797T_24801	6.271e-34	147.0	COG1835@1|root,COG1835@2|Bacteria,2J4RC@203682|Planctomycetes	203682|Planctomycetes	I	Acyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
SRD3_k127_2239998_2	359.CN09_25525	2.842e-88	301.0	COG2519@1|root,COG2519@2|Bacteria,1REXK@1224|Proteobacteria,2U905@28211|Alphaproteobacteria	28211|Alphaproteobacteria	J	TIGRFAM methyltransferase FkbM family	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_21
SRD3_k127_2239998_4	572477.Alvin_2972	1.708e-64	241.0	COG1134@1|root,COG1134@2|Bacteria,1MWWC@1224|Proteobacteria,1RN2T@1236|Gammaproteobacteria,1WXMD@135613|Chromatiales	135613|Chromatiales	GM	pfam abc	-	-	-	ko:K01990,ko:K09691	ko02010,map02010	M00250,M00254	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1,3.A.1.103	-	-	ABC_tran
SRD3_k127_2239998_5	1469245.JFBG01000056_gene2452	5.206e-53	199.0	COG1682@1|root,COG1682@2|Bacteria,1MWG4@1224|Proteobacteria,1S11D@1236|Gammaproteobacteria,1WXF5@135613|Chromatiales	135613|Chromatiales	GM	PFAM ABC-2 type transporter	-	-	-	ko:K01992,ko:K09690	ko02010,map02010	M00250,M00254	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1,3.A.1.103	-	-	ABC2_membrane
SRD3_k127_2239998_3	1088869.GMO_11120	2.182e-76	273.0	COG0438@1|root,COG0438@2|Bacteria,1RF3D@1224|Proteobacteria,2UBIW@28211|Alphaproteobacteria	28211|Alphaproteobacteria	M	PFAM glycosyl transferase group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glycos_transf_1
SRD3_k127_2239998_6	1470591.BW41_00531	3.001e-44	164.0	2C3QV@1|root,2Z7YP@2|Bacteria,1MXAM@1224|Proteobacteria,2U1FE@28211|Alphaproteobacteria,2K063@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Alginate_exp
SRD3_k127_2243027_4	629773.AORY01000004_gene223	6.741e-137	446.0	2E384@1|root,32Y7U@2|Bacteria,1N36R@1224|Proteobacteria,2UW56@28211|Alphaproteobacteria,2K1PQ@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	ko:K18546	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	-
SRD3_k127_2243027_5	1112216.JH594426_gene3943	8.566e-103	346.0	COG3391@1|root,COG3391@2|Bacteria,1RFSR@1224|Proteobacteria,2U8VQ@28211|Alphaproteobacteria,2K235@204457|Sphingomonadales	204457|Sphingomonadales	S	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2243027_11	1112212.JH584235_gene545	4.858e-38	148.0	2DZJF@1|root,32VCA@2|Bacteria,1P0DA@1224|Proteobacteria,2UUTF@28211|Alphaproteobacteria,2K5RC@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2243027_8	1470591.BW41_02461	6.082e-96	319.0	COG0745@1|root,COG0745@2|Bacteria,1MU67@1224|Proteobacteria,2TRTZ@28211|Alphaproteobacteria,2K3T1@204457|Sphingomonadales	204457|Sphingomonadales	T	Transcriptional regulatory protein, C terminal	-	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
SRD3_k127_2243027_2	1470591.BW41_02462	3.038e-150	488.0	COG0642@1|root,COG2205@2|Bacteria,1MW8M@1224|Proteobacteria,2TUSJ@28211|Alphaproteobacteria,2K1GN@204457|Sphingomonadales	204457|Sphingomonadales	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
SRD3_k127_2243027_3	702113.PP1Y_AT16549	2.447e-149	497.0	COG1538@1|root,COG1538@2|Bacteria,1QCDW@1224|Proteobacteria,2U14K@28211|Alphaproteobacteria,2K7YU@204457|Sphingomonadales	204457|Sphingomonadales	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
SRD3_k127_2243027_9	1282362.AEAC466_14290	6.003e-79	279.0	COG0845@1|root,COG0845@2|Bacteria,1MX8W@1224|Proteobacteria,2TRPM@28211|Alphaproteobacteria,2KK5C@204458|Caulobacterales	204458|Caulobacterales	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	-	-	-	-	-	-	-	-	-	HlyD_D23
SRD3_k127_2243027_0	1112216.JH594426_gene3940	0.0	1445.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TW85@28211|Alphaproteobacteria,2KED4@204457|Sphingomonadales	204457|Sphingomonadales	V	AcrB/AcrD/AcrF family	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
SRD3_k127_2243027_7	1112212.JH584235_gene3554	1.491e-98	329.0	COG0671@1|root,COG0671@2|Bacteria,1R91F@1224|Proteobacteria,2U31R@28211|Alphaproteobacteria,2K4HH@204457|Sphingomonadales	204457|Sphingomonadales	I	PAP2 superfamily	-	-	3.1.3.2	ko:K09474	ko00740,ko01100,ko02020,map00740,map01100,map02020	-	R00548	RC00017	ko00000,ko00001,ko01000	-	-	-	PAP2
SRD3_k127_2243027_1	1470591.BW41_02464	0.0	1144.0	COG4772@1|root,COG4772@2|Bacteria,1MWZ7@1224|Proteobacteria,2U1VC@28211|Alphaproteobacteria,2K186@204457|Sphingomonadales	204457|Sphingomonadales	P	TonB-dependent Receptor Plug Domain	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SRD3_k127_2243027_6	685778.AORL01000019_gene1798	1.763e-100	330.0	COG3707@1|root,COG3707@2|Bacteria,1MXDV@1224|Proteobacteria,2U220@28211|Alphaproteobacteria,2K1Y7@204457|Sphingomonadales	204457|Sphingomonadales	T	Chemotaxis protein CheY	-	-	-	ko:K07183	-	-	-	-	ko00000,ko02022	-	-	-	ANTAR,Response_reg
SRD3_k127_2243027_10	1449076.JOOE01000001_gene2364	1.685e-69	239.0	COG0715@1|root,COG0715@2|Bacteria,1MWDN@1224|Proteobacteria,2TS0X@28211|Alphaproteobacteria,2K03R@204457|Sphingomonadales	204457|Sphingomonadales	P	Nitrate transporter	-	-	-	ko:K22067	-	-	-	-	ko00000,ko02022	-	-	-	NMT1_2
SRD3_k127_2260521_1	1123267.JONN01000001_gene894	1.119e-54	197.0	COG2032@1|root,COG2032@2|Bacteria,1RGV4@1224|Proteobacteria,2UC22@28211|Alphaproteobacteria,2K541@204457|Sphingomonadales	204457|Sphingomonadales	P	Destroys radicals which are normally produced within the cells and which are toxic to biological systems	sodC	-	1.15.1.1	ko:K04565	ko04146,ko04213,ko05014,ko05016,ko05020,map04146,map04213,map05014,map05016,map05020	-	-	-	ko00000,ko00001,ko01000	-	-	-	Sod_Cu
SRD3_k127_2260521_0	1123267.JONN01000001_gene610	6.489e-284	884.0	COG4770@1|root,COG4770@2|Bacteria,1P6RE@1224|Proteobacteria,2TRC2@28211|Alphaproteobacteria,2K27B@204457|Sphingomonadales	204457|Sphingomonadales	I	acetyl propionyl-CoA carboxylase, alpha subunit	-	-	6.4.1.4	ko:K01968	ko00280,ko01100,map00280,map01100	M00036	R04138	RC00367,RC00942	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2
SRD3_k127_2260521_2	194867.ALBQ01000021_gene1885	2.053e-25	106.0	2B5YT@1|root,31YUV@2|Bacteria,1RF42@1224|Proteobacteria,2U8FC@28211|Alphaproteobacteria,2K5ZQ@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF3088)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3088
SRD3_k127_2274595_5	1123269.NX02_27875	1.188e-132	434.0	COG1090@1|root,COG1090@2|Bacteria,1MUB4@1224|Proteobacteria,2TRY5@28211|Alphaproteobacteria,2K8F6@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF1731)	-	-	-	ko:K07071	-	-	-	-	ko00000	-	-	-	DUF1731,Epimerase
SRD3_k127_2274595_1	1282362.AEAC466_17960	1.196e-162	520.0	COG1680@1|root,COG1680@2|Bacteria,1NHIY@1224|Proteobacteria,2U0A3@28211|Alphaproteobacteria,2KG2Q@204458|Caulobacterales	204458|Caulobacterales	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SRD3_k127_2274595_3	1122963.AUHB01000025_gene119	1.209e-148	489.0	COG1680@1|root,COG1680@2|Bacteria,1MVPR@1224|Proteobacteria,2TQRF@28211|Alphaproteobacteria	28211|Alphaproteobacteria	V	COG1680 Beta-lactamase class C and other penicillin binding proteins	-	-	3.4.16.4	ko:K01286	-	-	-	-	ko00000,ko01000	-	-	-	Beta-lactamase
SRD3_k127_2274595_13	1429916.X566_08875	1.103e-34	147.0	COG0586@1|root,COG0586@2|Bacteria,1MX4M@1224|Proteobacteria,2U6ZF@28211|Alphaproteobacteria,3JWK1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SNARE associated Golgi protein	-	-	3.1.3.1	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	M00126	R02135,R04620	RC00017	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	-	-	-	SNARE_assoc
SRD3_k127_2274595_10	266779.Meso_0915	9.617e-62	224.0	COG3963@1|root,COG3963@2|Bacteria,1N1KB@1224|Proteobacteria,2U646@28211|Alphaproteobacteria,43KCE@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	I	Phospholipid N-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25,RrnaAD
SRD3_k127_2274595_4	1510531.JQJJ01000013_gene267	9.383e-137	457.0	COG0642@1|root,COG2205@2|Bacteria,1N1Z2@1224|Proteobacteria,2TVIP@28211|Alphaproteobacteria,3JSKQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
SRD3_k127_2274595_9	335659.S23_33690	1.728e-81	279.0	COG0745@1|root,COG0745@2|Bacteria,1NCKY@1224|Proteobacteria,2TRPQ@28211|Alphaproteobacteria,3JRDE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Transcriptional regulatory protein, C terminal	-	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
SRD3_k127_2274595_0	1123269.NX02_24480	2.089e-253	794.0	COG1032@1|root,COG1032@2|Bacteria,1MWR0@1224|Proteobacteria,2TUPK@28211|Alphaproteobacteria,2KD0S@204457|Sphingomonadales	204457|Sphingomonadales	C	Elongator protein 3, MiaB family, Radical SAM	-	-	-	-	-	-	-	-	-	-	-	-	B12-binding,Radical_SAM
SRD3_k127_2274595_12	366602.Caul_3433	4.474e-46	173.0	2CSP1@1|root,32SRI@2|Bacteria,1N3EU@1224|Proteobacteria,2UIMK@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2274595_6	1112214.AHIS01000066_gene3318	1.068e-92	307.0	COG0103@1|root,COG0103@2|Bacteria,1RD4A@1224|Proteobacteria,2U5B5@28211|Alphaproteobacteria,2K0C7@204457|Sphingomonadales	204457|Sphingomonadales	J	Belongs to the universal ribosomal protein uS9 family	rpsI	-	-	ko:K02996	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S9
SRD3_k127_2274595_7	1112212.JH584235_gene1631	1.443e-92	306.0	COG0102@1|root,COG0102@2|Bacteria,1RA11@1224|Proteobacteria,2U5FM@28211|Alphaproteobacteria,2K28X@204457|Sphingomonadales	204457|Sphingomonadales	J	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly	rplM	-	-	ko:K02871	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L13
SRD3_k127_2274595_15	1449076.JOOE01000002_gene1429	1.162e-14	87.0	COG1324@1|root,COG1324@2|Bacteria,1N6TN@1224|Proteobacteria,2UF5Y@28211|Alphaproteobacteria,2K75D@204457|Sphingomonadales	204457|Sphingomonadales	P	CutA1 divalent ion tolerance protein	-	-	-	ko:K03926	-	-	-	-	ko00000	-	-	-	CutA1
SRD3_k127_2274595_2	1470591.BW41_00232	4.02e-158	504.0	COG1612@1|root,COG1612@2|Bacteria,1MVJ4@1224|Proteobacteria,2TR0M@28211|Alphaproteobacteria,2K0QN@204457|Sphingomonadales	204457|Sphingomonadales	O	Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group	ctaA	-	-	ko:K02259	ko00190,ko00860,ko01100,ko01110,ko02020,ko04714,map00190,map00860,map01100,map01110,map02020,map04714	M00154	R07412	RC00769	ko00000,ko00001,ko00002,ko03029	3.D.4.4	-	-	COX15-CtaA
SRD3_k127_2274595_11	1112212.JH584235_gene1628	5.134e-60	210.0	2E2R2@1|root,32XTN@2|Bacteria,1R3NP@1224|Proteobacteria,2U04F@28211|Alphaproteobacteria,2KEX9@204457|Sphingomonadales	204457|Sphingomonadales	S	MerC mercury resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MerC
SRD3_k127_2274595_8	1112214.AHIS01000066_gene3322	7.984e-83	276.0	COG0735@1|root,COG0735@2|Bacteria,1MZIW@1224|Proteobacteria,2U9G4@28211|Alphaproteobacteria,2K4GM@204457|Sphingomonadales	204457|Sphingomonadales	P	Belongs to the Fur family	-	-	-	ko:K09823	ko02024,map02024	-	-	-	ko00000,ko00001,ko03000	-	-	-	FUR
SRD3_k127_2274595_14	1007104.SUS17_1193	3.979e-15	75.0	COG1154@1|root,COG1154@2|Bacteria,1MUSJ@1224|Proteobacteria,2TRDD@28211|Alphaproteobacteria,2K0XY@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)	dxs	-	2.2.1.7	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	M00096	R05636	RC00032	ko00000,ko00001,ko00002,ko01000	-	-	-	DXP_synthase_N,Transket_pyr,Transketolase_C
SRD3_k127_2299561_7	1292034.OR37_00413	5.742e-135	449.0	COG1538@1|root,COG1538@2|Bacteria,1MUA8@1224|Proteobacteria,2TUFK@28211|Alphaproteobacteria,2KIFY@204458|Caulobacterales	204458|Caulobacterales	MU	PFAM Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
SRD3_k127_2299561_0	1112214.AHIS01000094_gene609	0.0	1633.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,2K02H@204457|Sphingomonadales	204457|Sphingomonadales	V	Efflux pump membrane transporter	-	-	-	ko:K18138	ko01501,ko01503,map01501,map01503	M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	2.A.6.2	-	-	ACR_tran
SRD3_k127_2299561_4	1112212.JH584235_gene3739	1.114e-180	574.0	COG0845@1|root,COG0845@2|Bacteria,1MU78@1224|Proteobacteria,2TSW4@28211|Alphaproteobacteria,2K1BG@204457|Sphingomonadales	204457|Sphingomonadales	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K03585	ko01501,ko01503,map01501,map01503	M00646,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	2.A.6.2,8.A.1.6	-	-	HlyD,HlyD_D23
SRD3_k127_2299561_16	1112212.JH584235_gene3740	1.58e-27	113.0	2FC5G@1|root,31H26@2|Bacteria,1NK4H@1224|Proteobacteria,2UM33@28211|Alphaproteobacteria,2KDQK@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2299561_11	1379701.JPJC01000196_gene761	5.867e-70	245.0	COG1671@1|root,COG1671@2|Bacteria,1RCZA@1224|Proteobacteria,2U997@28211|Alphaproteobacteria,2K4GS@204457|Sphingomonadales	204457|Sphingomonadales	S	Belongs to the UPF0178 family	-	-	-	ko:K09768	-	-	-	-	ko00000	-	-	-	DUF188
SRD3_k127_2299561_14	1379701.JPJC01000277_gene545	2.023e-54	199.0	COG0782@1|root,COG0782@2|Bacteria,1RHU5@1224|Proteobacteria,2UHKS@28211|Alphaproteobacteria,2KDS7@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcription elongation factor, GreA/GreB, C-term	-	-	-	-	-	-	-	-	-	-	-	-	GreA_GreB
SRD3_k127_2299561_12	685035.ADAE01000024_gene1819	3.87e-67	237.0	COG3000@1|root,COG3000@2|Bacteria,1RI5I@1224|Proteobacteria,2UAGB@28211|Alphaproteobacteria,2K35N@204457|Sphingomonadales	204457|Sphingomonadales	I	Fatty acid hydroxylase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
SRD3_k127_2299561_13	237727.NAP1_02260	9.172e-64	231.0	COG2207@1|root,COG2207@2|Bacteria,1P4M5@1224|Proteobacteria,2TSQV@28211|Alphaproteobacteria,2K48F@204457|Sphingomonadales	204457|Sphingomonadales	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
SRD3_k127_2299561_9	1112214.AHIS01000105_gene4041	4.168e-117	388.0	COG0726@1|root,COG0726@2|Bacteria,1PQ5E@1224|Proteobacteria,2TVJI@28211|Alphaproteobacteria,2K37W@204457|Sphingomonadales	204457|Sphingomonadales	G	Polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
SRD3_k127_2299561_1	1379701.JPJC01000089_gene3244	5.425e-228	709.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TQKE@28211|Alphaproteobacteria,2JZVG@204457|Sphingomonadales	204457|Sphingomonadales	I	acyl-CoA dehydrogenase	-	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SRD3_k127_2299561_3	1112216.JH594425_gene2571	5.357e-181	573.0	COG1024@1|root,COG1024@2|Bacteria,1MU0B@1224|Proteobacteria,2TQW3@28211|Alphaproteobacteria,2K1J0@204457|Sphingomonadales	204457|Sphingomonadales	I	enoyl-CoA hydratase	-	-	4.2.1.17	ko:K01692	ko00071,ko00280,ko00281,ko00310,ko00360,ko00362,ko00380,ko00410,ko00627,ko00640,ko00650,ko00903,ko00930,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00310,map00360,map00362,map00380,map00410,map00627,map00640,map00650,map00903,map00930,map01100,map01110,map01120,map01130,map01212	M00032,M00087	R03026,R03045,R04137,R04170,R04204,R04224,R04738,R04740,R04744,R04746,R04749,R05595,R06411,R06412,R06942,R08093	RC00831,RC00834,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_2
SRD3_k127_2299561_6	1112212.JH584235_gene3077	6.451e-141	450.0	COG1024@1|root,COG1024@2|Bacteria,1MWZC@1224|Proteobacteria,2TRYS@28211|Alphaproteobacteria,2K12I@204457|Sphingomonadales	204457|Sphingomonadales	I	Belongs to the enoyl-CoA hydratase isomerase family	-	-	4.2.1.17	ko:K01692	ko00071,ko00280,ko00281,ko00310,ko00360,ko00362,ko00380,ko00410,ko00627,ko00640,ko00650,ko00903,ko00930,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00310,map00360,map00362,map00380,map00410,map00627,map00640,map00650,map00903,map00930,map01100,map01110,map01120,map01130,map01212	M00032,M00087	R03026,R03045,R04137,R04170,R04204,R04224,R04738,R04740,R04744,R04746,R04749,R05595,R06411,R06412,R06942,R08093	RC00831,RC00834,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
SRD3_k127_2299561_5	1112214.AHIS01000105_gene4037	1.421e-141	454.0	COG2084@1|root,COG2084@2|Bacteria,1RA7F@1224|Proteobacteria,2UVAZ@28211|Alphaproteobacteria,2K1F0@204457|Sphingomonadales	204457|Sphingomonadales	I	Belongs to the 3-hydroxyisobutyrate dehydrogenase family	mmsB	-	1.1.1.31	ko:K00020	ko00280,ko01100,map00280,map01100	-	R05066	RC00099	ko00000,ko00001,ko01000	-	-	-	NAD_binding_11,NAD_binding_2
SRD3_k127_2299561_17	1112214.AHIS01000092_gene495	0.0007442	43.0	COG0587@1|root,COG0587@2|Bacteria,1MUIF@1224|Proteobacteria,2TSCN@28211|Alphaproteobacteria,2K1R8@204457|Sphingomonadales	204457|Sphingomonadales	L	DNA polymerase	dnaE	-	2.7.7.7	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_alpha,HHH_6,PHP
SRD3_k127_2299561_2	384765.SIAM614_08763	1.933e-191	610.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria	28211|Alphaproteobacteria	IQ	COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II	matB	-	-	ko:K18661	ko00280,map00280	-	R03383	RC00004,RC00137	ko00000,ko00001,ko01000	-	-	-	AMP-binding,AMP-binding_C
SRD3_k127_2299561_8	1112214.AHIS01000066_gene3316	5.575e-119	389.0	COG1409@1|root,COG1409@2|Bacteria,1MW6B@1224|Proteobacteria,2U1GX@28211|Alphaproteobacteria,2K28P@204457|Sphingomonadales	204457|Sphingomonadales	S	Calcineurin-like phosphoesterase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos
SRD3_k127_2299561_10	1123269.NX02_27870	3.273e-74	256.0	29Q66@1|root,30B54@2|Bacteria,1N9YZ@1224|Proteobacteria,2TS6J@28211|Alphaproteobacteria,2K4W3@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF4166)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4166
SRD3_k127_2299561_15	1123269.NX02_27875	2.775e-50	181.0	COG1090@1|root,COG1090@2|Bacteria,1MUB4@1224|Proteobacteria,2TRY5@28211|Alphaproteobacteria,2K8F6@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF1731)	-	-	-	ko:K07071	-	-	-	-	ko00000	-	-	-	DUF1731,Epimerase
SRD3_k127_2318994_1	452662.SJA_C2-00430	4.415e-151	480.0	COG3000@1|root,COG3000@2|Bacteria,1MW5G@1224|Proteobacteria,2TU63@28211|Alphaproteobacteria,2K016@204457|Sphingomonadales	204457|Sphingomonadales	I	Fatty acid hydroxylase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
SRD3_k127_2318994_0	1121123.AUAO01000001_gene768	1.909e-274	864.0	COG2114@1|root,COG4252@1|root,COG2114@2|Bacteria,COG4252@2|Bacteria,1MV1V@1224|Proteobacteria,2TRTY@28211|Alphaproteobacteria	28211|Alphaproteobacteria	T	Adenylate Guanylate cyclase	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	CHASE2,Guanylate_cyc
SRD3_k127_2318994_4	1112214.AHIS01000005_gene1797	1.318e-71	264.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,2TQR7@28211|Alphaproteobacteria,2K8JH@204457|Sphingomonadales	204457|Sphingomonadales	NT	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).	-	-	-	-	-	-	-	-	-	-	-	-	MCPsignal
SRD3_k127_2318994_5	1123278.KB893542_gene5563	8.326e-09	68.0	COG2963@1|root,COG2963@2|Bacteria,4NTDV@976|Bacteroidetes,47SZ9@768503|Cytophagia	976|Bacteroidetes	L	transposase activity	-	-	-	-	-	-	-	-	-	-	-	-	HTH_23
SRD3_k127_2318994_3	1174684.EBMC1_11370	3.491e-89	303.0	COG4235@1|root,COG4235@2|Bacteria,1MY4J@1224|Proteobacteria,2TSI7@28211|Alphaproteobacteria,2K1X1@204457|Sphingomonadales	204457|Sphingomonadales	O	cytochrome c biogenesis	-	-	-	ko:K02200	-	-	-	-	ko00000	-	-	-	TPR_11,TPR_14,TPR_16,TPR_2
SRD3_k127_2318994_2	702113.PP1Y_AT6345	1.167e-93	314.0	COG0492@1|root,COG0664@1|root,COG1142@1|root,COG0492@2|Bacteria,COG0664@2|Bacteria,COG1142@2|Bacteria,1QUPD@1224|Proteobacteria,2TW3N@28211|Alphaproteobacteria,2K28S@204457|Sphingomonadales	204457|Sphingomonadales	C	4Fe-4S dicluster domain	-	-	-	-	-	-	-	-	-	-	-	-	Fer4_7,Pyr_redox_2,Pyr_redox_3,cNMP_binding
SRD3_k127_232316_1	1144305.PMI02_04258	9.028e-76	277.0	2DUXF@1|root,33SVE@2|Bacteria,1QY06@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_232316_0	1144305.PMI02_04261	9.289e-144	472.0	2ECCY@1|root,336B7@2|Bacteria,1QY05@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_232316_3	314225.ELI_09345	9.158e-08	59.0	29FGY@1|root,302EK@2|Bacteria,1PV9V@1224|Proteobacteria,2V1PR@28211|Alphaproteobacteria,2KBUI@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2390945_42	1408418.JNJH01000022_gene1766	1.325e-19	90.0	COG2227@1|root,COG2227@2|Bacteria,1QUR5@1224|Proteobacteria,2TW4B@28211|Alphaproteobacteria	28211|Alphaproteobacteria	H	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25
SRD3_k127_2390945_10	1112214.AHIS01000047_gene2042	1.84e-151	488.0	COG0654@1|root,COG0654@2|Bacteria,1NG5Q@1224|Proteobacteria,2TYY1@28211|Alphaproteobacteria,2KEPJ@204457|Sphingomonadales	204457|Sphingomonadales	CH	FAD binding domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3
SRD3_k127_2390945_27	1112212.JH584235_gene2522	3.477e-80	268.0	COG0229@1|root,COG0229@2|Bacteria,1RGWC@1224|Proteobacteria,2U70T@28211|Alphaproteobacteria,2K4RU@204457|Sphingomonadales	204457|Sphingomonadales	O	Belongs to the MsrB Met sulfoxide reductase family	msrB	-	1.8.4.12	ko:K07305	-	-	-	-	ko00000,ko01000	-	-	-	SelR
SRD3_k127_2390945_1	1112216.JH594425_gene1023	0.0	1047.0	COG0744@1|root,COG0744@2|Bacteria,1QTST@1224|Proteobacteria,2TQQ8@28211|Alphaproteobacteria,2K0HX@204457|Sphingomonadales	204457|Sphingomonadales	M	penicillin-binding protein	-	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly,Transpeptidase
SRD3_k127_2390945_18	1112216.JH594425_gene1024	1.103e-102	338.0	COG1451@1|root,COG1451@2|Bacteria,1MXZU@1224|Proteobacteria,2U9TZ@28211|Alphaproteobacteria,2KD5F@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function DUF45	-	-	-	ko:K07043	-	-	-	-	ko00000	-	-	-	DUF45
SRD3_k127_2390945_25	1379701.JPJC01000206_gene1698	4.105e-83	280.0	COG2983@1|root,COG2983@2|Bacteria,1RHMX@1224|Proteobacteria,2U99S@28211|Alphaproteobacteria,2K4JE@204457|Sphingomonadales	204457|Sphingomonadales	S	Belongs to the UPF0260 family	-	-	-	ko:K09160	-	-	-	-	ko00000	-	-	-	CxxCxxCC
SRD3_k127_2390945_30	1112212.JH584235_gene2518	1.338e-77	264.0	COG1999@1|root,COG1999@2|Bacteria,1RHJ8@1224|Proteobacteria,2U0Q3@28211|Alphaproteobacteria,2K4RS@204457|Sphingomonadales	204457|Sphingomonadales	S	protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems	-	-	-	ko:K07152	-	-	-	-	ko00000,ko03029	-	-	-	SCO1-SenC
SRD3_k127_2390945_31	1007104.SUS17_3531	1.743e-72	250.0	COG0666@1|root,COG0666@2|Bacteria,1RFFD@1224|Proteobacteria,2U8T6@28211|Alphaproteobacteria,2K4S6@204457|Sphingomonadales	204457|Sphingomonadales	S	Ankyrin repeat	-	-	-	-	-	-	-	-	-	-	-	-	Ank,Ank_2,Ank_4,Ank_5
SRD3_k127_2390945_29	1379701.JPJC01000206_gene1695	1.731e-78	264.0	COG5321@1|root,COG5321@2|Bacteria,1RDXW@1224|Proteobacteria,2U73Y@28211|Alphaproteobacteria,2K5GG@204457|Sphingomonadales	204457|Sphingomonadales	S	DNA repair protein MmcB-like	-	-	-	-	-	-	-	-	-	-	-	-	MmcB-like
SRD3_k127_2390945_36	1112214.AHIS01000047_gene2050	1.679e-68	239.0	COG3773@1|root,COG3773@2|Bacteria,1RDSV@1224|Proteobacteria,2U8XY@28211|Alphaproteobacteria,2K4PG@204457|Sphingomonadales	204457|Sphingomonadales	M	COG3773 Cell wall hydrolyses involved in spore germination	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_2
SRD3_k127_2390945_39	1379701.JPJC01000206_gene1693	8.597e-37	143.0	COG5447@1|root,COG5447@2|Bacteria,1N1KU@1224|Proteobacteria,2UFES@28211|Alphaproteobacteria,2K70S@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF1491)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1491
SRD3_k127_2390945_28	1379701.JPJC01000206_gene1692	1.324e-79	267.0	COG2050@1|root,COG2050@2|Bacteria,1RFI9@1224|Proteobacteria,2UF80@28211|Alphaproteobacteria,2K4EA@204457|Sphingomonadales	204457|Sphingomonadales	Q	Thioesterase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	4HBT
SRD3_k127_2390945_37	1112214.AHIS01000047_gene2052	1.414e-61	216.0	COG1762@1|root,COG1762@2|Bacteria,1RD0E@1224|Proteobacteria,2U7B0@28211|Alphaproteobacteria,2K6E5@204457|Sphingomonadales	204457|Sphingomonadales	G	PTS IIA-like nitrogen-regulatory protein PtsN	ptsN	-	-	ko:K02806	ko02060,map02060	-	-	-	ko00000,ko00001,ko01000,ko02000	-	-	-	PTS_EIIA_2
SRD3_k127_2390945_21	1112212.JH584235_gene2511	3.244e-90	300.0	COG1544@1|root,COG1544@2|Bacteria,1MZHW@1224|Proteobacteria,2TV3J@28211|Alphaproteobacteria,2K2CA@204457|Sphingomonadales	204457|Sphingomonadales	J	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase	hpf	-	-	-	-	-	-	-	-	-	-	-	Ribosom_S30AE_C,Ribosomal_S30AE
SRD3_k127_2390945_15	1112216.JH594425_gene1033	3.464e-120	388.0	COG0847@1|root,COG0847@2|Bacteria,1MV8Z@1224|Proteobacteria,2TTFF@28211|Alphaproteobacteria,2K06H@204457|Sphingomonadales	204457|Sphingomonadales	L	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease	dnaQ	-	2.7.7.7	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	RNase_T
SRD3_k127_2390945_24	1112212.JH584235_gene2509	1.116e-83	284.0	COG0237@1|root,COG0237@2|Bacteria,1RCXT@1224|Proteobacteria,2U765@28211|Alphaproteobacteria,2K3YB@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A	coaE	-	2.7.1.24	ko:K00859	ko00770,ko01100,map00770,map01100	M00120	R00130	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	CoaE
SRD3_k127_2390945_14	1449076.JOOE01000003_gene3714	2.085e-127	416.0	COG0169@1|root,COG0169@2|Bacteria,1MVH4@1224|Proteobacteria,2TS99@28211|Alphaproteobacteria,2K1U1@204457|Sphingomonadales	204457|Sphingomonadales	E	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)	aroE	-	1.1.1.25	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R02413	RC00206	ko00000,ko00001,ko00002,ko01000	-	-	-	Shikimate_DH,Shikimate_dh_N
SRD3_k127_2390945_20	1112214.AHIS01000047_gene2057	8.017e-96	318.0	COG0424@1|root,COG0424@2|Bacteria,1RDA9@1224|Proteobacteria,2U9H5@28211|Alphaproteobacteria,2K2S3@204457|Sphingomonadales	204457|Sphingomonadales	D	Maf-like protein	-	-	-	ko:K06287	-	-	-	-	ko00000	-	-	-	Maf
SRD3_k127_2390945_9	1112212.JH584235_gene2506	8.587e-153	489.0	COG1806@1|root,COG1806@2|Bacteria,1MUHU@1224|Proteobacteria,2TT66@28211|Alphaproteobacteria,2K0GA@204457|Sphingomonadales	204457|Sphingomonadales	S	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation	-	-	2.7.11.33,2.7.4.28	ko:K09773	-	-	-	-	ko00000,ko01000	-	-	-	Kinase-PPPase
SRD3_k127_2390945_6	1112214.AHIS01000047_gene2059	3.93e-176	557.0	COG0407@1|root,COG0407@2|Bacteria,1MUG1@1224|Proteobacteria,2TQQV@28211|Alphaproteobacteria,2JZZP@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III	hemE	-	4.1.1.37	ko:K01599	ko00860,ko01100,ko01110,map00860,map01100,map01110	M00121	R03197,R04972	RC00872	ko00000,ko00001,ko00002,ko01000	-	-	-	URO-D
SRD3_k127_2390945_33	1112214.AHIS01000047_gene2060	5.991e-71	248.0	COG1981@1|root,COG1981@2|Bacteria,1RHGS@1224|Proteobacteria,2U987@28211|Alphaproteobacteria,2K4J9@204457|Sphingomonadales	204457|Sphingomonadales	S	membrane	-	-	-	ko:K08973	-	-	-	-	ko00000	-	-	-	UPF0093
SRD3_k127_2390945_4	1030157.AFMP01000004_gene2044	5.64e-261	807.0	COG1158@1|root,COG1158@2|Bacteria,1MUCF@1224|Proteobacteria,2TRB4@28211|Alphaproteobacteria,2K1UD@204457|Sphingomonadales	204457|Sphingomonadales	K	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template	rho	-	-	ko:K03628	ko03018,map03018	-	-	-	ko00000,ko00001,ko03019,ko03021	-	-	-	ATP-synt_ab,Rho_N,Rho_RNA_bind
SRD3_k127_2390945_40	1537715.JQFJ01000002_gene2032	6.275e-32	128.0	COG2329@1|root,COG2329@2|Bacteria	2|Bacteria	S	heme oxygenase (decyclizing) activity	yczJ	-	-	-	-	-	-	-	-	-	-	-	ABM
SRD3_k127_2390945_26	1112212.JH584235_gene2502	2.823e-82	278.0	COG0861@1|root,COG0861@2|Bacteria,1PN8B@1224|Proteobacteria,2TUV5@28211|Alphaproteobacteria,2K1SQ@204457|Sphingomonadales	204457|Sphingomonadales	P	membrane protein, TerC	-	-	-	-	-	-	-	-	-	-	-	-	TerC
SRD3_k127_2390945_16	1379701.JPJC01000206_gene1680	9.566e-112	383.0	COG0412@1|root,COG0412@2|Bacteria,1MW88@1224|Proteobacteria,2U1D8@28211|Alphaproteobacteria,2K0IT@204457|Sphingomonadales	204457|Sphingomonadales	Q	dienelactone hydrolase	-	-	3.1.1.45	ko:K01061	ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130	-	R03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222	RC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686	ko00000,ko00001,ko01000	-	-	-	DLH
SRD3_k127_2390945_41	1550073.JROH01000008_gene1723	7.249e-30	121.0	2EMU4@1|root,33FGG@2|Bacteria,1NNB6@1224|Proteobacteria,2UMJV@28211|Alphaproteobacteria,2K6U1@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2390945_7	1449076.JOOE01000003_gene3725	2.179e-157	507.0	COG0486@1|root,COG0486@2|Bacteria,1MUCQ@1224|Proteobacteria,2TQZW@28211|Alphaproteobacteria,2K0HT@204457|Sphingomonadales	204457|Sphingomonadales	J	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34	mnmE	-	-	ko:K03650	-	-	R08701	RC00053,RC00209,RC00870	ko00000,ko01000,ko03016	-	-	-	MMR_HSR1,MnmE_helical,TrmE_N
SRD3_k127_2390945_3	1112212.JH584235_gene2498	9.435e-299	925.0	COG0445@1|root,COG0445@2|Bacteria,1MU6F@1224|Proteobacteria,2TRJS@28211|Alphaproteobacteria,2K05A@204457|Sphingomonadales	204457|Sphingomonadales	D	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34	gidA	-	-	ko:K03495	-	-	R08701	RC00053,RC00209,RC00870	ko00000,ko03016,ko03036	-	-	-	GIDA,GIDA_assoc
SRD3_k127_2390945_32	1112212.JH584235_gene2497	2.11e-71	248.0	COG0357@1|root,COG0357@2|Bacteria,1MY0K@1224|Proteobacteria,2U9T9@28211|Alphaproteobacteria,2K4N2@204457|Sphingomonadales	204457|Sphingomonadales	J	Specifically methylates the N7 position of guanine in position 527 of 16S rRNA	rsmG	-	2.1.1.170	ko:K03501	-	-	-	-	ko00000,ko01000,ko03009,ko03036	-	-	-	GidB
SRD3_k127_2390945_13	1112214.AHIS01000047_gene2066	3.341e-141	453.0	COG1192@1|root,COG1192@2|Bacteria,1MV43@1224|Proteobacteria,2TSWH@28211|Alphaproteobacteria,2K02Z@204457|Sphingomonadales	204457|Sphingomonadales	D	Chromosome partitioning	-	-	-	ko:K03496	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	AAA_31
SRD3_k127_2390945_12	1112212.JH584235_gene2495	1.219e-149	481.0	COG1475@1|root,COG1475@2|Bacteria,1MW2E@1224|Proteobacteria,2TSTN@28211|Alphaproteobacteria,2K0RQ@204457|Sphingomonadales	204457|Sphingomonadales	K	Belongs to the ParB family	parB	-	-	ko:K03497	-	-	-	-	ko00000,ko03000,ko03036,ko04812	-	-	-	ParBc
SRD3_k127_2390945_8	1112212.JH584235_gene2494	4.883e-153	493.0	COG1466@1|root,COG1466@2|Bacteria,1N7AB@1224|Proteobacteria,2UHPM@28211|Alphaproteobacteria,2K0ER@204457|Sphingomonadales	204457|Sphingomonadales	L	DNA polymerase III	holA	-	2.7.7.7	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta
SRD3_k127_2390945_34	1379701.JPJC01000206_gene1670	5.593e-70	246.0	COG5468@1|root,COG5468@2|Bacteria,1RKF8@1224|Proteobacteria,2UACI@28211|Alphaproteobacteria,2K4FJ@204457|Sphingomonadales	204457|Sphingomonadales	S	Lipopolysaccharide-assembly	-	-	-	ko:K03643	-	-	-	-	ko00000,ko02000	1.B.42.1	-	-	LptE
SRD3_k127_2390945_0	1112212.JH584235_gene2492	0.0	1500.0	COG0495@1|root,COG0495@2|Bacteria,1MV47@1224|Proteobacteria,2TQPK@28211|Alphaproteobacteria,2K0Q0@204457|Sphingomonadales	204457|Sphingomonadales	J	Belongs to the class-I aminoacyl-tRNA synthetase family	leuS	-	6.1.1.4	ko:K01869	ko00970,map00970	M00359,M00360	R03657	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	Anticodon_1,tRNA-synt_1,tRNA-synt_1_2
SRD3_k127_2390945_35	1449076.JOOE01000003_gene3732	5.174e-69	239.0	2C2J5@1|root,315UG@2|Bacteria,1RHAH@1224|Proteobacteria,2U94W@28211|Alphaproteobacteria,2K4E5@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF3576)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3576
SRD3_k127_2390945_22	1112216.JH594425_gene1052	1.487e-88	297.0	2C7BT@1|root,33MZ9@2|Bacteria,1NMQ4@1224|Proteobacteria,2UG5B@28211|Alphaproteobacteria,2K40I@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Porin_4
SRD3_k127_2390945_38	1219049.SP5_043_00190	1.965e-51	196.0	COG0352@1|root,COG0352@2|Bacteria,1MZ0K@1224|Proteobacteria,2UA7U@28211|Alphaproteobacteria,2KCXN@204457|Sphingomonadales	204457|Sphingomonadales	H	Thiamine monophosphate synthase	-	-	2.5.1.3	ko:K00788	ko00730,ko01100,map00730,map01100	M00127	R03223,R10712	RC00224,RC03255,RC03397	ko00000,ko00001,ko00002,ko01000	-	-	-	TMP-TENI
SRD3_k127_2390945_19	1112212.JH584235_gene2488	2.714e-100	333.0	COG0325@1|root,COG0325@2|Bacteria,1MWN7@1224|Proteobacteria,2TR5Z@28211|Alphaproteobacteria,2K0C6@204457|Sphingomonadales	204457|Sphingomonadales	S	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis	-	-	-	ko:K06997	-	-	-	-	ko00000	-	-	-	Ala_racemase_N
SRD3_k127_2390945_17	1449076.JOOE01000003_gene3736	7.663e-105	348.0	COG0637@1|root,COG0637@2|Bacteria,1NSPA@1224|Proteobacteria,2U0W3@28211|Alphaproteobacteria,2K05N@204457|Sphingomonadales	204457|Sphingomonadales	S	Haloacid dehalogenase-like hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	HAD_2
SRD3_k127_2390945_5	1112212.JH584235_gene2486	4.207e-190	597.0	COG0807@1|root,COG0807@2|Bacteria,1MWZR@1224|Proteobacteria,2TR82@28211|Alphaproteobacteria,2K0DD@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate	ribA	-	3.5.4.25	ko:K01497	ko00740,ko00790,ko01100,ko01110,ko02024,map00740,map00790,map01100,map01110,map02024	M00125	R00425	RC00293,RC02504	ko00000,ko00001,ko00002,ko01000	-	-	-	GTP_cyclohydro2
SRD3_k127_2390945_11	1112212.JH584235_gene2485	1.669e-150	480.0	COG0708@1|root,COG0708@2|Bacteria,1MVMC@1224|Proteobacteria,2TRWQ@28211|Alphaproteobacteria,2K09T@204457|Sphingomonadales	204457|Sphingomonadales	L	exodeoxyribonuclease III	-	-	3.1.11.2	ko:K01142	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exo_endo_phos
SRD3_k127_2390945_43	224914.BMEI1928	9.106e-05	46.0	COG1024@1|root,COG1024@2|Bacteria,1MVEC@1224|Proteobacteria,2TRPS@28211|Alphaproteobacteria,1J2VD@118882|Brucellaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	-	-	4.2.1.18	ko:K13766	ko00280,ko01100,map00280,map01100	M00036	R02085	RC02416	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
SRD3_k127_2390945_23	1219049.SP5_043_00100	3.016e-85	287.0	COG2834@1|root,COG2834@2|Bacteria,1RA1S@1224|Proteobacteria,2U58W@28211|Alphaproteobacteria,2K43J@204457|Sphingomonadales	204457|Sphingomonadales	M	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)	lolA	-	-	-	-	-	-	-	-	-	-	-	LolA
SRD3_k127_2390945_2	1549858.MC45_14475	4.139e-301	930.0	COG1674@1|root,COG1674@2|Bacteria,1MVPI@1224|Proteobacteria,2TR48@28211|Alphaproteobacteria,2K02P@204457|Sphingomonadales	204457|Sphingomonadales	D	DNA segregation ATPase FtsK SpoIIIE	ftsK	-	-	ko:K03466	-	-	-	-	ko00000,ko03036	3.A.12	-	-	FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma
SRD3_k127_2520320_9	426117.M446_4912	1.858e-52	188.0	COG0179@1|root,COG0179@2|Bacteria,1MUPF@1224|Proteobacteria,2TQQG@28211|Alphaproteobacteria,1JT7P@119045|Methylobacteriaceae	28211|Alphaproteobacteria	Q	PFAM fumarylacetoacetate (FAA) hydrolase	-	-	-	ko:K18336	ko00051,ko01120,map00051,map01120	-	R10691	RC00326,RC03236	ko00000,ko00001,ko01000	-	-	-	FAA_hydrolase
SRD3_k127_2520320_2	1449076.JOOE01000002_gene1093	3.499e-212	670.0	COG2721@1|root,COG2721@2|Bacteria,1MU9V@1224|Proteobacteria,2TTDT@28211|Alphaproteobacteria,2K15R@204457|Sphingomonadales	204457|Sphingomonadales	G	D-galactarate dehydratase / Altronate hydrolase, C terminus	-	-	4.2.1.7	ko:K01685	ko00040,ko01100,map00040,map01100	M00631	R01540	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	GD_AH_C,SAF
SRD3_k127_2520320_8	1112212.JH584235_gene1478	1.047e-55	202.0	2AM6A@1|root,31C0R@2|Bacteria,1QGH8@1224|Proteobacteria,2V5XF@28211|Alphaproteobacteria,2KA5J@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2520320_0	1449076.JOOE01000001_gene2776	6.059e-217	704.0	COG4191@1|root,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TR8X@28211|Alphaproteobacteria,2K0ZS@204457|Sphingomonadales	204457|Sphingomonadales	T	nitrogen fixation sensor protein fixL	-	-	2.7.13.3	ko:K14986	ko02020,map02020	M00524	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA,PAS,PAS_3,PAS_9
SRD3_k127_2520320_7	1449076.JOOE01000001_gene2777	4.348e-85	286.0	COG4566@1|root,COG4566@2|Bacteria,1NUGD@1224|Proteobacteria,2URNE@28211|Alphaproteobacteria,2KCK2@204457|Sphingomonadales	204457|Sphingomonadales	T	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
SRD3_k127_2520320_6	685778.AORL01000010_gene2855	1.578e-88	308.0	COG5000@1|root,COG5000@2|Bacteria,1MWKZ@1224|Proteobacteria,2U6NR@28211|Alphaproteobacteria,2K2XA@204457|Sphingomonadales	204457|Sphingomonadales	T	Histidine kinase-like ATPases	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,PAS_8
SRD3_k127_2520320_4	1122137.AQXF01000007_gene3498	3.133e-153	499.0	COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,2TQPG@28211|Alphaproteobacteria	28211|Alphaproteobacteria	T	COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains	-	-	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activ_2,Sigma54_activat,V4R,XylR_N
SRD3_k127_2520320_3	1449076.JOOE01000001_gene2750	3.405e-193	613.0	COG0845@1|root,COG0845@2|Bacteria,1R50D@1224|Proteobacteria,2VGS2@28211|Alphaproteobacteria,2KE5Y@204457|Sphingomonadales	204457|Sphingomonadales	M	HlyD family secretion protein	-	-	-	ko:K02005	-	-	-	-	ko00000	-	-	-	Biotin_lipoyl_2,HlyD_3
SRD3_k127_2520320_5	1234595.C725_1358	1.28e-118	392.0	COG1136@1|root,COG1136@2|Bacteria,1MU45@1224|Proteobacteria,2TS3W@28211|Alphaproteobacteria,4BQ2M@82117|unclassified Alphaproteobacteria	28211|Alphaproteobacteria	V	ATPases associated with a variety of cellular activities	-	-	-	ko:K02003,ko:K05685	ko02010,map02010	M00258,M00709	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1,3.A.1.122.1,3.A.1.122.12	-	-	ABC_tran,FtsX,MacB_PCD
SRD3_k127_2520320_1	1449076.JOOE01000001_gene2747	6.435e-217	687.0	COG0577@1|root,COG0577@2|Bacteria,1NREW@1224|Proteobacteria,2U1KH@28211|Alphaproteobacteria,2K128@204457|Sphingomonadales	204457|Sphingomonadales	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
SRD3_k127_2564795_21	653045.Strvi_5195	2.686e-33	134.0	COG1020@1|root,COG1020@2|Bacteria,2GISR@201174|Actinobacteria	201174|Actinobacteria	Q	Non-ribosomal peptide synthetase modules and related proteins	-	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C,Beta-lactamase,Condensation,PP-binding
SRD3_k127_2564795_6	316274.Haur_1875	7.861e-263	853.0	COG1020@1|root,COG1020@2|Bacteria	2|Bacteria	Q	D-alanine [D-alanyl carrier protein] ligase activity	-	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C,Condensation,PP-binding,Thioesterase
SRD3_k127_2564795_1	63737.Npun_R3425	0.0	1225.0	COG1028@1|root,COG3319@1|root,COG3321@1|root,COG1028@2|Bacteria,COG3319@2|Bacteria,COG3321@2|Bacteria,1FZXE@1117|Cyanobacteria,1HJVE@1161|Nostocales	1117|Cyanobacteria	Q	COGs COG3321 Polyketide synthase modules and related protein	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_1,KAsynt_C_assoc,KR,Ketoacyl-synt_C,PP-binding,ketoacyl-synt
SRD3_k127_2564795_3	1192034.CAP_8747	1.203e-292	947.0	COG1020@1|root,COG1020@2|Bacteria	2|Bacteria	Q	D-alanine [D-alanyl carrier protein] ligase activity	mcyB	-	-	ko:K16131	ko01054,map01054	-	-	-	ko00000,ko00001,ko01008	-	-	-	AMP-binding,AMP-binding_C,Condensation,PP-binding,Thioesterase
SRD3_k127_2564795_12	1038858.AXBA01000038_gene5063	5.02e-122	407.0	COG0165@1|root,COG0165@2|Bacteria,1MUTU@1224|Proteobacteria,2TR4H@28211|Alphaproteobacteria,3EY7Z@335928|Xanthobacteraceae	28211|Alphaproteobacteria	E	Argininosuccinate lyase C-terminal	-	-	4.3.2.1	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	M00029,M00844,M00845	R01086	RC00445,RC00447	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ASL_C2,Lyase_1
SRD3_k127_2564795_15	1038858.AXBA01000038_gene5064	9.199e-105	353.0	COG1821@1|root,COG1821@2|Bacteria	2|Bacteria	GM	Pfam ATP-grasp domain	-	-	6.3.5.5	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R00256,R00575,R01395,R10948,R10949	RC00002,RC00010,RC00043,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000	-	-	-	ATP-grasp_3,ATP-grasp_4,Acetyltransf_10
SRD3_k127_2564795_14	2002.JOEQ01000059_gene1512	3.854e-116	385.0	COG0031@1|root,COG0031@2|Bacteria,2GK6J@201174|Actinobacteria,4EI62@85012|Streptosporangiales	201174|Actinobacteria	E	Pyridoxal-phosphate dependent enzyme	-	-	2.5.1.47	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	M00021	R00897,R03601,R04859	RC00020,RC02814,RC02821	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
SRD3_k127_2564795_22	498761.HM1_2558	9.949e-31	132.0	COG0496@1|root,COG0496@2|Bacteria,1TS2T@1239|Firmicutes,24BI5@186801|Clostridia	186801|Clostridia	Q	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates	surE	-	3.1.3.5	ko:K03787	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346	RC00017	ko00000,ko00001,ko01000	-	-	-	SurE
SRD3_k127_2564795_20	279238.Saro_1681	1.7e-52	191.0	COG5517@1|root,COG5517@2|Bacteria,1RAVG@1224|Proteobacteria,2U6A6@28211|Alphaproteobacteria,2K5S4@204457|Sphingomonadales	204457|Sphingomonadales	Q	Ring hydroxylating beta subunit	-	-	1.14.12.10	ko:K05550	ko00362,ko00364,ko00622,ko01100,ko01120,ko01220,map00362,map00364,map00622,map01100,map01120,map01220	M00551	R05290,R05291,R05428,R05621,R05622,R05665,R08100,R08101,R08108,R08109,R08110	RC00270,RC01378,RC01450,RC01910	br01602,ko00000,ko00001,ko00002,ko01000	-	-	-	Ring_hydroxyl_B
SRD3_k127_2564795_7	279238.Saro_1680	1.882e-224	706.0	COG4638@1|root,COG4638@2|Bacteria,1N6MJ@1224|Proteobacteria,2TVEE@28211|Alphaproteobacteria,2K0K5@204457|Sphingomonadales	204457|Sphingomonadales	P	alpha subunit	-	-	1.14.12.10	ko:K05549	ko00362,ko00364,ko00622,ko01100,ko01120,ko01220,map00362,map00364,map00622,map01100,map01120,map01220	M00551	R05290,R05291,R05428,R05621,R05622,R05665,R08100,R08101,R08108,R08109,R08110	RC00270,RC01378,RC01450,RC01910	br01602,ko00000,ko00001,ko00002,ko01000	-	-	-	Rieske,Ring_hydroxyl_A
SRD3_k127_2564795_8	279238.Saro_1679	1.491e-213	674.0	COG0028@1|root,COG0028@2|Bacteria,1MX6Q@1224|Proteobacteria,2TS3K@28211|Alphaproteobacteria,2K3E8@204457|Sphingomonadales	204457|Sphingomonadales	EH	Thiamine pyrophosphate enzyme, central domain	-	-	4.1.1.7	ko:K01576	ko00627,ko01120,map00627,map01120	-	R01764,R02672	RC00595	ko00000,ko00001,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
SRD3_k127_2564795_19	279238.Saro_1678	1.165e-62	226.0	COG0583@1|root,COG0583@2|Bacteria,1MVHT@1224|Proteobacteria,2TTDJ@28211|Alphaproteobacteria,2K1MT@204457|Sphingomonadales	204457|Sphingomonadales	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SRD3_k127_2564795_16	279238.Saro_1677	5.989e-96	323.0	COG1893@1|root,COG1893@2|Bacteria,1MX5M@1224|Proteobacteria,2TVRD@28211|Alphaproteobacteria,2K4D9@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid	-	-	1.1.1.169	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	M00119	R02472	RC00726	ko00000,ko00001,ko00002,ko01000	-	-	-	ApbA,ApbA_C
SRD3_k127_2564795_5	1112214.AHIS01000081_gene3549	5.519e-268	834.0	COG2272@1|root,COG2272@2|Bacteria,1MVQZ@1224|Proteobacteria,2TTHT@28211|Alphaproteobacteria,2K0DZ@204457|Sphingomonadales	204457|Sphingomonadales	I	Belongs to the type-B carboxylesterase lipase family	-	-	-	ko:K03929	-	-	-	-	ko00000,ko01000	-	CE10	-	COesterase
SRD3_k127_2564795_9	194867.ALBQ01000021_gene1920	1.124e-187	592.0	COG2017@1|root,COG2017@2|Bacteria,1MVMN@1224|Proteobacteria,2TTJ7@28211|Alphaproteobacteria,2K0YY@204457|Sphingomonadales	204457|Sphingomonadales	G	Converts alpha-aldose to the beta-anomer	-	-	-	-	-	-	-	-	-	-	-	-	Aldose_epim
SRD3_k127_2564795_4	1449076.JOOE01000002_gene779	2.156e-290	897.0	COG0644@1|root,COG0654@1|root,COG0644@2|Bacteria,COG0654@2|Bacteria,1NSGN@1224|Proteobacteria,2UPGQ@28211|Alphaproteobacteria,2KEGZ@204457|Sphingomonadales	204457|Sphingomonadales	CH	Tryptophan halogenase	-	-	1.14.19.9	ko:K14266	ko00404,ko01130,map00404,map01130	M00789,M00790	R09570	RC00949	ko00000,ko00001,ko00002,ko01000	-	-	-	Trp_halogenase
SRD3_k127_2564795_2	1123269.NX02_07565	8.063e-304	961.0	COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,1MV8W@1224|Proteobacteria,2U0EP@28211|Alphaproteobacteria,2JZXV@204457|Sphingomonadales	204457|Sphingomonadales	P	receptor	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SRD3_k127_2564795_18	1449076.JOOE01000002_gene781	2.216e-64	229.0	28N05@1|root,2ZB6Q@2|Bacteria,1RG2N@1224|Proteobacteria,2U883@28211|Alphaproteobacteria,2K2ZG@204457|Sphingomonadales	204457|Sphingomonadales	S	SapC	-	-	-	-	-	-	-	-	-	-	-	-	SapC
SRD3_k127_2564795_11	1112212.JH584235_gene1914	1.844e-142	459.0	COG2850@1|root,COG2850@2|Bacteria,1MUAC@1224|Proteobacteria,2U0YE@28211|Alphaproteobacteria,2K0V9@204457|Sphingomonadales	204457|Sphingomonadales	S	A domain family that is part of the cupin metalloenzyme superfamily.	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_8
SRD3_k127_2564795_10	366602.Caul_2411	1.601e-159	511.0	COG0627@1|root,COG0627@2|Bacteria,1QIRQ@1224|Proteobacteria,2U23Q@28211|Alphaproteobacteria,2KHJT@204458|Caulobacterales	204458|Caulobacterales	S	esterase	-	-	-	-	-	-	-	-	-	-	-	-	Esterase
SRD3_k127_2564795_13	1081640.AGFU01000063_gene3731	3.702e-120	390.0	COG2186@1|root,COG2186@2|Bacteria,1MV83@1224|Proteobacteria,2U6P8@28211|Alphaproteobacteria,2K0DN@204457|Sphingomonadales	204457|Sphingomonadales	K	gntR family	-	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SRD3_k127_2564795_17	1112216.JH594425_gene223	7.321e-85	294.0	COG1609@1|root,COG1609@2|Bacteria,1N4ND@1224|Proteobacteria,2UP1F@28211|Alphaproteobacteria,2KE0Q@204457|Sphingomonadales	204457|Sphingomonadales	K	helix_turn _helix lactose operon repressor	-	-	-	-	-	-	-	-	-	-	-	-	LacI,Peripla_BP_3
SRD3_k127_2564795_0	1112212.JH584235_gene801	0.0	1310.0	COG2911@1|root,COG2911@2|Bacteria,1MUVD@1224|Proteobacteria,2TR45@28211|Alphaproteobacteria,2K0C4@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	ko:K09800	-	-	-	-	ko00000,ko02000	-	-	-	TamB
SRD3_k127_2577590_3	685778.AORL01000010_gene3118	1.085e-120	390.0	COG2013@1|root,COG2013@2|Bacteria,1NBBE@1224|Proteobacteria,2TU3J@28211|Alphaproteobacteria,2K2YB@204457|Sphingomonadales	204457|Sphingomonadales	S	Mitochondrial biogenesis AIM24	-	-	-	-	-	-	-	-	-	-	-	-	AIM24
SRD3_k127_2577590_10	1219049.SP5_082_00020	1.265e-08	57.0	2AMEV@1|root,31CAA@2|Bacteria,1Q8AZ@1224|Proteobacteria,2VEH2@28211|Alphaproteobacteria,2K7VB@204457|Sphingomonadales	204457|Sphingomonadales	S	F subunit of K+-transporting ATPase (Potass_KdpF)	-	-	-	-	-	-	-	-	-	-	-	-	Potass_KdpF
SRD3_k127_2577590_2	13690.CP98_04329	8.724e-278	863.0	COG2060@1|root,COG2060@2|Bacteria,1MV1K@1224|Proteobacteria,2TSIJ@28211|Alphaproteobacteria,2K0P6@204457|Sphingomonadales	204457|Sphingomonadales	P	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane	kdpA	-	3.6.3.12	ko:K01546	ko02020,map02020	-	-	-	ko00000,ko00001,ko01000	3.A.3.7	-	-	KdpA
SRD3_k127_2577590_1	314266.SKA58_01475	0.0	1031.0	COG2216@1|root,COG2216@2|Bacteria,1MU7D@1224|Proteobacteria,2TREM@28211|Alphaproteobacteria,2K0K4@204457|Sphingomonadales	204457|Sphingomonadales	P	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system	kdpB	-	3.6.3.12	ko:K01547	ko02020,map02020	-	-	-	ko00000,ko00001,ko01000	3.A.3.7	-	-	E1-E2_ATPase,Hydrolase
SRD3_k127_2577590_7	1502850.FG91_03053	3.195e-67	234.0	COG2156@1|root,COG2156@2|Bacteria,1RABG@1224|Proteobacteria,2TSQ7@28211|Alphaproteobacteria,2K2ZB@204457|Sphingomonadales	204457|Sphingomonadales	P	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex	kdpC	-	3.6.3.12	ko:K01548	ko02020,map02020	-	-	-	ko00000,ko00001,ko01000	3.A.3.7	-	-	KdpC
SRD3_k127_2577590_0	1449076.JOOE01000002_gene927	0.0	1262.0	COG0642@1|root,COG2205@2|Bacteria,1MUZQ@1224|Proteobacteria,2TSS7@28211|Alphaproteobacteria,2K1GW@204457|Sphingomonadales	204457|Sphingomonadales	T	Osmosensitive K channel	kdpD	-	2.7.13.3	ko:K07646	ko02020,map02020	M00454	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	DUF4118,GAF_3,HATPase_c,HisKA,KdpD,Usp
SRD3_k127_2577590_5	1449076.JOOE01000002_gene928	5.127e-110	359.0	COG0745@1|root,COG0745@2|Bacteria,1MWZ5@1224|Proteobacteria,2TV3A@28211|Alphaproteobacteria,2K0MT@204457|Sphingomonadales	204457|Sphingomonadales	T	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	-	-	-	ko:K07667	ko02020,ko02024,map02020,map02024	M00454	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
SRD3_k127_2577590_11	1219049.SP5_005_01190	1.062e-06	55.0	2BKSW@1|root,32F92@2|Bacteria,1QEXU@1224|Proteobacteria,2UZA1@28211|Alphaproteobacteria,2K8DT@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2577590_9	314225.ELI_09265	1.942e-43	173.0	COG2197@1|root,COG2197@2|Bacteria,1NB2U@1224|Proteobacteria,2UH2Z@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
SRD3_k127_2577590_6	1144305.PMI02_04276	5.396e-75	258.0	2CH4Q@1|root,338ZX@2|Bacteria	2|Bacteria	S	Protein of unknown function (DUF4255)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4255
SRD3_k127_2577590_8	1144305.PMI02_04275	2.751e-58	216.0	2C8HC@1|root,33V6K@2|Bacteria,1NVBE@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2577590_4	1144305.PMI02_04274	6.378e-111	373.0	COG3497@1|root,COG3497@2|Bacteria,1MX89@1224|Proteobacteria,2TVB3@28211|Alphaproteobacteria,2K4BS@204457|Sphingomonadales	204457|Sphingomonadales	S	Phage tail sheath protein	-	-	-	ko:K06907	-	-	-	-	ko00000	-	-	-	Phage_sheath_1,Phage_sheath_1C
SRD3_k127_2577693_0	1470591.BW41_01123	5.811e-295	910.0	COG0056@1|root,COG0056@2|Bacteria,1MUG7@1224|Proteobacteria,2TQYK@28211|Alphaproteobacteria,2K08A@204457|Sphingomonadales	204457|Sphingomonadales	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit	atpA	-	3.6.3.14	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko01000	3.A.2.1	-	-	ATP-synt_ab,ATP-synt_ab_C,ATP-synt_ab_N
SRD3_k127_2577693_2	1081640.AGFU01000018_gene1779	3.427e-83	280.0	COG0712@1|root,COG0712@2|Bacteria,1MVRH@1224|Proteobacteria,2U5IC@28211|Alphaproteobacteria,2K4UU@204457|Sphingomonadales	204457|Sphingomonadales	C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation	atpH	-	-	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	OSCP
SRD3_k127_2577693_1	1112212.JH584235_gene1460	1.533e-118	384.0	COG0412@1|root,COG0412@2|Bacteria,1MW7S@1224|Proteobacteria,2TTPH@28211|Alphaproteobacteria,2KDGA@204457|Sphingomonadales	204457|Sphingomonadales	Q	Dienelactone hydrolase family	-	-	3.1.1.45	ko:K01061	ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130	-	R03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222	RC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686	ko00000,ko00001,ko01000	-	-	-	DLH
SRD3_k127_2577693_4	1120705.FG95_03011	3.388e-69	245.0	COG1073@1|root,COG1073@2|Bacteria,1RIWI@1224|Proteobacteria,2UAKC@28211|Alphaproteobacteria,2K5H5@204457|Sphingomonadales	204457|Sphingomonadales	S	COG1073 Hydrolases of the alpha beta superfamily	-	-	-	ko:K06889	-	-	-	-	ko00000	-	-	-	Hydrolase_4
SRD3_k127_2577693_3	1485544.JQKP01000002_gene1603	1.822e-69	257.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2VH3V@28216|Betaproteobacteria	1224|Proteobacteria	T	Diguanylate cyclase	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,MHYT
SRD3_k127_2577693_5	1112216.JH594425_gene2249	3.88e-31	125.0	COG0350@1|root,COG2169@1|root,COG0350@2|Bacteria,COG2169@2|Bacteria,1N2YQ@1224|Proteobacteria,2TQRX@28211|Alphaproteobacteria,2K165@204457|Sphingomonadales	204457|Sphingomonadales	FL	Metal binding domain of Ada	ada	-	2.1.1.63	ko:K10778	-	-	-	-	ko00000,ko01000,ko03000,ko03400	-	-	-	Ada_Zn_binding,DNA_binding_1,HTH_18,Methyltransf_1N
SRD3_k127_2598062_1	1449076.JOOE01000003_gene3531	1.781e-52	189.0	COG0697@1|root,COG0697@2|Bacteria,1R46X@1224|Proteobacteria,2TSE9@28211|Alphaproteobacteria,2K44M@204457|Sphingomonadales	204457|Sphingomonadales	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA,Multi_Drug_Res
SRD3_k127_2598062_0	1112212.JH584235_gene1931	5.35e-296	913.0	COG1793@1|root,COG1793@2|Bacteria,1MV3S@1224|Proteobacteria,2TRQ9@28211|Alphaproteobacteria,2K08Z@204457|Sphingomonadales	204457|Sphingomonadales	L	ATP-dependent DNA ligase	-	-	6.5.1.1,6.5.1.6,6.5.1.7	ko:K10747	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	-	R00381,R00382,R10822,R10823	RC00005	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	DNA_ligase_A_C,DNA_ligase_A_M,DNA_ligase_A_N
SRD3_k127_2618466_3	1112212.JH584235_gene534	1.855e-78	263.0	COG0299@1|root,COG0299@2|Bacteria,1MWN1@1224|Proteobacteria,2TRY6@28211|Alphaproteobacteria,2K28Q@204457|Sphingomonadales	204457|Sphingomonadales	F	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate	purN	-	2.1.2.2	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	M00048	R04325,R04326	RC00026,RC00197,RC01128	ko00000,ko00001,ko00002,ko01000	-	-	-	Formyl_trans_N,YjbR
SRD3_k127_2618466_5	1112214.AHIS01000094_gene582	4.754e-48	175.0	COG3801@1|root,COG3801@2|Bacteria,1PTCF@1224|Proteobacteria,2V58I@28211|Alphaproteobacteria,2K60B@204457|Sphingomonadales	204457|Sphingomonadales	S	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate	-	-	-	-	-	-	-	-	-	-	-	-	YjbR
SRD3_k127_2618466_6	1112212.JH584235_gene533	4.932e-44	171.0	2FBT4@1|root,343XW@2|Bacteria,1NV0Z@1224|Proteobacteria,2URIG@28211|Alphaproteobacteria,2K4MR@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2618466_2	1470591.BW41_03759	2.631e-79	267.0	COG0105@1|root,COG0105@2|Bacteria,1R9ZA@1224|Proteobacteria,2U5CS@28211|Alphaproteobacteria,2K3WY@204457|Sphingomonadales	204457|Sphingomonadales	F	Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate	ndk	-	2.7.4.6	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	M00049,M00050,M00052,M00053	R00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895	RC00002	ko00000,ko00001,ko00002,ko01000,ko04131	-	-	-	NDK
SRD3_k127_2618466_1	1396141.BATP01000059_gene2599	1.197e-120	409.0	COG1835@1|root,COG1835@2|Bacteria,46X8A@74201|Verrucomicrobia,2IUZP@203494|Verrucomicrobiae	203494|Verrucomicrobiae	I	Acyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
SRD3_k127_2618466_4	1112214.AHIS01000094_gene586	2.632e-70	241.0	COG2927@1|root,COG2927@2|Bacteria,1RGVC@1224|Proteobacteria,2U94V@28211|Alphaproteobacteria,2K5Y0@204457|Sphingomonadales	204457|Sphingomonadales	L	DNA polymerase III	holC	-	2.7.7.7	ko:K02339	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_chi
SRD3_k127_2618466_0	1112212.JH584235_gene529	3.001e-254	790.0	COG0260@1|root,COG0260@2|Bacteria,1MUF9@1224|Proteobacteria,2TQU9@28211|Alphaproteobacteria,2K04B@204457|Sphingomonadales	204457|Sphingomonadales	E	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides	pepA	-	3.4.11.1	ko:K01255	ko00480,ko01100,map00480,map01100	-	R00899,R04951	RC00096,RC00141	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_M17,Peptidase_M17_N
SRD3_k127_2628460_3	1112214.AHIS01000082_gene3651	3.294e-146	466.0	COG2307@1|root,COG2308@1|root,COG2307@2|Bacteria,COG2308@2|Bacteria,1MX5P@1224|Proteobacteria,2TRJE@28211|Alphaproteobacteria,2JZVX@204457|Sphingomonadales	204457|Sphingomonadales	S	Circularly permuted ATP-grasp type 2	-	-	-	-	-	-	-	-	-	-	-	-	Alpha-E,CP_ATPgrasp_2
SRD3_k127_2628460_0	1112212.JH584235_gene2984	1.003e-164	524.0	COG1305@1|root,COG1305@2|Bacteria,1MVMI@1224|Proteobacteria,2TRFC@28211|Alphaproteobacteria,2K2EW@204457|Sphingomonadales	204457|Sphingomonadales	E	Transglutaminase/protease-like homologues	-	-	-	-	-	-	-	-	-	-	-	-	Bact_transglu_N,Transglut_core
SRD3_k127_2628460_1	1112216.JH594425_gene1551	7.398e-162	513.0	COG0484@1|root,COG2214@1|root,COG0484@2|Bacteria,COG2214@2|Bacteria,1MUZ4@1224|Proteobacteria,2TR01@28211|Alphaproteobacteria,2K1JP@204457|Sphingomonadales	204457|Sphingomonadales	O	molecular chaperone	dnaJ_2	-	-	-	-	-	-	-	-	-	-	-	DnaJ,DnaJ_C
SRD3_k127_2628460_4	1123269.NX02_27455	4.106e-123	404.0	COG1295@1|root,COG1295@2|Bacteria,1MXQA@1224|Proteobacteria,2TTN5@28211|Alphaproteobacteria,2K0UY@204457|Sphingomonadales	204457|Sphingomonadales	S	ribonuclease BN	-	-	-	ko:K07058	-	-	-	-	ko00000	-	-	-	Virul_fac_BrkB
SRD3_k127_2628460_2	1112212.JH584235_gene2987	1.679e-160	507.0	COG0623@1|root,COG0623@2|Bacteria,1MV05@1224|Proteobacteria,2TSU4@28211|Alphaproteobacteria,2K0BH@204457|Sphingomonadales	204457|Sphingomonadales	I	Enoyl- acyl-carrier-protein reductase NADH	fabI	-	1.3.1.10,1.3.1.9	ko:K00208	ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212	M00083,M00572	R01404,R04429,R04430,R04724,R04725,R04955,R04956,R04958,R04959,R04961,R04962,R04966,R04967,R04969,R04970,R07765,R10118,R10122,R11671	RC00052,RC00076,RC00120	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
SRD3_k127_2628460_5	685778.AORL01000004_gene3484	1.494e-47	172.0	COG0082@1|root,COG0082@2|Bacteria,1MU98@1224|Proteobacteria,2TQY2@28211|Alphaproteobacteria,2K0X4@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system	aroC	-	4.2.3.5	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R01714	RC00586	ko00000,ko00001,ko00002,ko01000	-	-	-	Chorismate_synt
SRD3_k127_2632596_4	1112212.JH584235_gene2101	2.278e-162	518.0	COG4993@1|root,COG4993@2|Bacteria,1N7DU@1224|Proteobacteria,2U6Z1@28211|Alphaproteobacteria,2K133@204457|Sphingomonadales	204457|Sphingomonadales	G	Dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2632596_3	1112212.JH584235_gene2100	1.479e-209	655.0	COG3146@1|root,COG3146@2|Bacteria,1MU35@1224|Proteobacteria,2TS5I@28211|Alphaproteobacteria,2K1NQ@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	ko:K09919	-	-	-	-	ko00000	-	-	-	FemAB_like
SRD3_k127_2632596_10	1122132.AQYH01000006_gene3328	7.166e-49	178.0	COG2329@1|root,COG2329@2|Bacteria,1RGVV@1224|Proteobacteria,2U9A3@28211|Alphaproteobacteria,4BEPI@82115|Rhizobiaceae	28211|Alphaproteobacteria	S	Antibiotic biosynthesis monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	ABM
SRD3_k127_2632596_9	439375.Oant_1989	1.06e-53	190.0	COG5470@1|root,COG5470@2|Bacteria,1RIH6@1224|Proteobacteria,2U9VZ@28211|Alphaproteobacteria,1J37M@118882|Brucellaceae	28211|Alphaproteobacteria	S	NIPSNAP	MA20_35555	-	-	-	-	-	-	-	-	-	-	-	NIPSNAP
SRD3_k127_2632596_7	864069.MicloDRAFT_00016290	9.212e-90	300.0	COG0640@1|root,COG0640@2|Bacteria,1MWCW@1224|Proteobacteria,2TTA5@28211|Alphaproteobacteria,1JVJK@119045|Methylobacteriaceae	28211|Alphaproteobacteria	K	regulatory protein, arsR	ydfF	GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010035,GO:0010038,GO:0010288,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032791,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046870,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097063,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	HTH_20
SRD3_k127_2632596_11	629773.AORY01000015_gene1228	4.95e-38	149.0	COG1317@1|root,COG1317@2|Bacteria,1NCR8@1224|Proteobacteria,2UISY@28211|Alphaproteobacteria,2K32S@204457|Sphingomonadales	204457|Sphingomonadales	NU	Flagellar assembly protein FliH	-	-	-	ko:K02411	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2	-	-	FliH
SRD3_k127_2632596_5	1112212.JH584235_gene2153	3.46e-156	497.0	COG0598@1|root,COG0598@2|Bacteria,1MW8W@1224|Proteobacteria,2U2S4@28211|Alphaproteobacteria,2K1TZ@204457|Sphingomonadales	204457|Sphingomonadales	P	Mg2 transporter protein, CorA family protein	-	-	-	ko:K16074	-	-	-	-	ko00000,ko02000	1.A.35.4	-	-	CorA
SRD3_k127_2632596_6	1112216.JH594425_gene819	8.66e-98	327.0	COG1648@1|root,COG1648@2|Bacteria,1RFEE@1224|Proteobacteria,2U6CW@28211|Alphaproteobacteria,2K2V1@204457|Sphingomonadales	204457|Sphingomonadales	H	Siroheme synthase	-	-	1.3.1.76,2.1.1.107,4.99.1.4	ko:K02302	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R02864,R03194,R03947	RC00003,RC00871,RC01012,RC01034	ko00000,ko00001,ko00002,ko01000	-	-	-	CysG_dimeriser,NAD_binding_7
SRD3_k127_2632596_2	1112212.JH584235_gene2155	5.602e-225	702.0	COG0019@1|root,COG0019@2|Bacteria,1MUA6@1224|Proteobacteria,2TQPB@28211|Alphaproteobacteria,2JZWD@204457|Sphingomonadales	204457|Sphingomonadales	E	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine	lysA	-	4.1.1.20	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R00451	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Orn_Arg_deC_N,Orn_DAP_Arg_deC
SRD3_k127_2632596_12	1112212.JH584235_gene2156	4.486e-22	99.0	293KA@1|root,2ZR29@2|Bacteria,1NKAC@1224|Proteobacteria,2UK1U@28211|Alphaproteobacteria,2K6TK@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2632596_1	1112212.JH584235_gene2157	4.973e-251	787.0	COG0165@1|root,COG0165@2|Bacteria,1MUTU@1224|Proteobacteria,2TR4H@28211|Alphaproteobacteria,2K185@204457|Sphingomonadales	204457|Sphingomonadales	E	argininosuccinate lyase	argH	-	4.3.2.1	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	M00029,M00844,M00845	R01086	RC00445,RC00447	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ASL_C2,Lyase_1
SRD3_k127_2632596_8	1112216.JH594425_gene823	2.113e-57	209.0	COG0526@1|root,COG0526@2|Bacteria,1MZ5J@1224|Proteobacteria,2TR0C@28211|Alphaproteobacteria,2K5QM@204457|Sphingomonadales	204457|Sphingomonadales	CO	Redoxin	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Redoxin
SRD3_k127_2632596_0	1346791.M529_07240	0.0	1364.0	COG1629@1|root,COG4206@1|root,COG4206@2|Bacteria,COG4771@2|Bacteria,1NTFF@1224|Proteobacteria,2UQ28@28211|Alphaproteobacteria	28211|Alphaproteobacteria	M	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SRD3_k127_2679135_0	1112214.AHIS01000056_gene2905	1.896e-260	825.0	COG2272@1|root,COG2272@2|Bacteria,1MVQZ@1224|Proteobacteria,2TUA9@28211|Alphaproteobacteria,2K1A5@204457|Sphingomonadales	204457|Sphingomonadales	I	Belongs to the type-B carboxylesterase lipase family	-	-	-	ko:K03929	-	-	-	-	ko00000,ko01000	-	CE10	-	COesterase,PBP
SRD3_k127_2679135_1	1112214.AHIS01000056_gene2904	1.379e-215	676.0	COG2271@1|root,COG2271@2|Bacteria,1MWYR@1224|Proteobacteria,2TSXW@28211|Alphaproteobacteria,2K1KD@204457|Sphingomonadales	204457|Sphingomonadales	G	COG0477 Permeases of the major facilitator superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SRD3_k127_2679135_2	450851.PHZ_c0672	4.336e-86	287.0	COG1309@1|root,COG1309@2|Bacteria,1R6X5@1224|Proteobacteria,2U7EK@28211|Alphaproteobacteria,2KF4Q@204458|Caulobacterales	204458|Caulobacterales	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SRD3_k127_2681188_3	1003200.AXXA_05458	2.322e-14	74.0	COG2084@1|root,COG2084@2|Bacteria,1NV8Y@1224|Proteobacteria,2W1IY@28216|Betaproteobacteria	28216|Betaproteobacteria	I	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase	-	-	1.1.1.31	ko:K00020	ko00280,ko01100,map00280,map01100	-	R05066	RC00099	ko00000,ko00001,ko01000	-	-	-	NAD_binding_11,NAD_binding_2
SRD3_k127_2681188_1	69395.JQLZ01000003_gene293	6.367e-53	194.0	2DMXX@1|root,32UAZ@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2681188_2	1206741.BAFX01000187_gene7552	1.097e-28	121.0	2BRSW@1|root,32KSX@2|Bacteria,2H8XA@201174|Actinobacteria	201174|Actinobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2681188_0	1408418.JNJH01000010_gene3490	2.127e-77	265.0	2DM5C@1|root,31SFK@2|Bacteria,1RHYU@1224|Proteobacteria,2UIDQ@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2720570_11	305900.GV64_11420	0.0002127	46.0	290RU@1|root,2ZNDZ@2|Bacteria,1P98B@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2720570_7	1192759.AKIB01000006_gene17	1.356e-38	153.0	COG1633@1|root,COG1633@2|Bacteria,1RJUG@1224|Proteobacteria,2UATR@28211|Alphaproteobacteria,2K5EA@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF2383)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2383
SRD3_k127_2720570_8	1207055.C100_15305	2.445e-35	141.0	2DC1J@1|root,342D9@2|Bacteria,1RHVZ@1224|Proteobacteria,2UAY2@28211|Alphaproteobacteria,2KCHD@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2720570_6	261292.Nit79A3_1920	1.614e-39	158.0	COG3509@1|root,COG3509@2|Bacteria,1N6M6@1224|Proteobacteria,2W3JG@28216|Betaproteobacteria	28216|Betaproteobacteria	Q	Esterase PHB depolymerase	-	-	-	ko:K03932	-	-	-	-	ko00000	-	CE1	-	Esterase_phd
SRD3_k127_2720570_0	194867.ALBQ01000042_gene1347	2.383e-127	418.0	COG3509@1|root,COG3509@2|Bacteria,1MXUI@1224|Proteobacteria,2TUS5@28211|Alphaproteobacteria,2K1CB@204457|Sphingomonadales	204457|Sphingomonadales	Q	Esterase PHB depolymerase	-	-	-	-	-	-	-	-	-	-	-	-	Esterase_phd
SRD3_k127_2720570_5	745310.G432_04320	6.005e-62	231.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,2TQR7@28211|Alphaproteobacteria,2K1AE@204457|Sphingomonadales	204457|Sphingomonadales	NT	chemotaxis	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	MCPsignal
SRD3_k127_2720570_9	1038859.AXAU01000026_gene2339	6.38e-28	118.0	2C6PE@1|root,31R5T@2|Bacteria,1RHVT@1224|Proteobacteria,2U9C6@28211|Alphaproteobacteria,3JYRQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2720570_3	1112216.JH594425_gene181	4.985e-70	251.0	COG2135@1|root,COG2135@2|Bacteria,1MY65@1224|Proteobacteria,2U39X@28211|Alphaproteobacteria,2K2FI@204457|Sphingomonadales	204457|Sphingomonadales	S	Belongs to the SOS response-associated peptidase family	-	-	-	-	-	-	-	-	-	-	-	-	SRAP
SRD3_k127_2720570_2	1219035.NT2_08_00760	2.673e-79	269.0	28JRZ@1|root,2Z9HI@2|Bacteria,1R52Z@1224|Proteobacteria,2U6D6@28211|Alphaproteobacteria,2K3XN@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF4126)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4126
SRD3_k127_2720570_4	1112216.JH594425_gene1618	4.728e-67	236.0	COG3548@1|root,COG3548@2|Bacteria,1R542@1224|Proteobacteria,2TU86@28211|Alphaproteobacteria,2K5HY@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF1211)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1211
SRD3_k127_2720570_1	1112216.JH594425_gene1619	1.584e-103	338.0	COG5405@1|root,COG5405@2|Bacteria,1MVF2@1224|Proteobacteria,2TRRE@28211|Alphaproteobacteria,2K0IZ@204457|Sphingomonadales	204457|Sphingomonadales	O	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery	hslV	-	3.4.25.2	ko:K01419	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Proteasome
SRD3_k127_2720570_10	1123269.NX02_20265	0.0002045	45.0	COG3250@1|root,COG3250@2|Bacteria,1P9KJ@1224|Proteobacteria,2TV5M@28211|Alphaproteobacteria,2K34U@204457|Sphingomonadales	204457|Sphingomonadales	G	alpha-L-rhamnosidase	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_106
SRD3_k127_2792049_0	392499.Swit_3475	2.242e-228	713.0	COG0471@1|root,COG3273@1|root,COG0471@2|Bacteria,COG3273@2|Bacteria,1MU0K@1224|Proteobacteria,2TSFS@28211|Alphaproteobacteria,2K1E7@204457|Sphingomonadales	204457|Sphingomonadales	P	Citrate transporter	-	-	-	-	-	-	-	-	-	-	-	-	CitMHS,Na_sulph_symp,TrkA_C
SRD3_k127_2792049_5	745310.G432_07745	5.037e-24	118.0	COG3209@1|root,COG3209@2|Bacteria,1MVV1@1224|Proteobacteria,2UBV3@28211|Alphaproteobacteria,2K32E@204457|Sphingomonadales	204457|Sphingomonadales	M	RHS Repeat	-	-	-	-	-	-	-	-	-	-	-	-	LysM,RHS_repeat
SRD3_k127_2792049_1	228405.HNE_2526	7.891e-201	657.0	COG3209@1|root,COG3209@2|Bacteria,1MVV1@1224|Proteobacteria,2UBV3@28211|Alphaproteobacteria,43ZJX@69657|Hyphomonadaceae	28211|Alphaproteobacteria	M	COG3209 Rhs family protein	-	-	-	-	-	-	-	-	-	-	-	-	LysM,RHS_repeat
SRD3_k127_2792049_7	291985.CCSI01000006_gene1232	3.635e-15	83.0	2E8HV@1|root,2ZM2W@2|Bacteria,1PPS2@1224|Proteobacteria,2V276@28211|Alphaproteobacteria,2KAPI@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2792049_6	1112216.JH594425_gene2726	5.034e-22	102.0	28WVU@1|root,2ZIV5@2|Bacteria,1NGX2@1224|Proteobacteria,2UJJ9@28211|Alphaproteobacteria,2K6RU@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF2842)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2842
SRD3_k127_2792049_3	1112214.AHIS01000101_gene1660	1.934e-79	268.0	COG0212@1|root,COG0212@2|Bacteria,1MZG0@1224|Proteobacteria,2UBY4@28211|Alphaproteobacteria,2K4QF@204457|Sphingomonadales	204457|Sphingomonadales	H	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family	-	-	6.3.3.2	ko:K01934	ko00670,ko01100,map00670,map01100	-	R02301	RC00183	ko00000,ko00001,ko01000	-	-	-	5-FTHF_cyc-lig
SRD3_k127_2792049_10	1379701.JPJC01000168_gene876	1.975e-05	47.0	COG0438@1|root,COG0438@2|Bacteria,1MVIM@1224|Proteobacteria,2TR88@28211|Alphaproteobacteria,2K0WY@204457|Sphingomonadales	204457|Sphingomonadales	M	Glycosyl transferase	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4
SRD3_k127_2792049_8	1550073.JROH01000004_gene2287	5.453e-10	64.0	2AM6X@1|root,31C1I@2|Bacteria,1Q7ZU@1224|Proteobacteria,2VE5J@28211|Alphaproteobacteria,2K707@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2792049_2	1112214.AHIS01000101_gene1657	3.376e-85	284.0	COG0057@1|root,COG0057@2|Bacteria,1MU93@1224|Proteobacteria,2TR6E@28211|Alphaproteobacteria,2K0GC@204457|Sphingomonadales	204457|Sphingomonadales	G	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family	gapA	GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363	1.2.1.12	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	M00001,M00002,M00003,M00165,M00166,M00308,M00552	R01061	RC00149	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	-	-	-	Gp_dh_C,Gp_dh_N
SRD3_k127_2814247_8	1112212.JH584235_gene3402	5.286e-28	113.0	COG0593@1|root,COG0593@2|Bacteria,1MU5H@1224|Proteobacteria,2TT03@28211|Alphaproteobacteria,2JZZ0@204457|Sphingomonadales	204457|Sphingomonadales	L	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids	dnaA	-	-	ko:K02313	ko02020,ko04112,map02020,map04112	-	-	-	ko00000,ko00001,ko03032,ko03036	-	-	-	Bac_DnaA,Bac_DnaA_C,DnaA_N
SRD3_k127_2814247_6	1545915.JROG01000007_gene3172	5.456e-66	233.0	2C0PG@1|root,330E3@2|Bacteria,1RA6M@1224|Proteobacteria,2U5UJ@28211|Alphaproteobacteria,2K3P1@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF4136)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4136
SRD3_k127_2814247_3	1112212.JH584235_gene3404	1.606e-161	513.0	COG0180@1|root,COG0180@2|Bacteria,1MV4T@1224|Proteobacteria,2TQZX@28211|Alphaproteobacteria,2K24N@204457|Sphingomonadales	204457|Sphingomonadales	J	Tryptophanyl-tRNA synthetase	trpS	-	6.1.1.2	ko:K01867	ko00970,map00970	M00359,M00360	R03664	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_1b
SRD3_k127_2814247_1	1112216.JH594425_gene134	2.269e-267	829.0	COG0728@1|root,COG0728@2|Bacteria,1MUH0@1224|Proteobacteria,2TS44@28211|Alphaproteobacteria,2K03M@204457|Sphingomonadales	204457|Sphingomonadales	S	Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane	murJ	-	-	ko:K03980	-	-	-	-	ko00000,ko01011,ko02000	2.A.66.4	-	-	MVIN
SRD3_k127_2814247_5	1112214.AHIS01000065_gene2653	1.586e-76	259.0	COG1952@1|root,COG1952@2|Bacteria,1RI75@1224|Proteobacteria,2UBTB@28211|Alphaproteobacteria,2K4QA@204457|Sphingomonadales	204457|Sphingomonadales	U	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA	secB	-	-	ko:K03071	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044,ko03110	3.A.5	-	-	SecB
SRD3_k127_2814247_4	1112212.JH584235_gene3407	2.566e-94	314.0	COG4395@1|root,COG4395@2|Bacteria,1NCIX@1224|Proteobacteria,2TTDQ@28211|Alphaproteobacteria,2K0UG@204457|Sphingomonadales	204457|Sphingomonadales	S	import inner membrane translocase, subunit Tim44	-	-	-	-	-	-	-	-	-	-	-	-	Tim44
SRD3_k127_2814247_2	1112214.AHIS01000065_gene2655	8.308e-175	557.0	COG2821@1|root,COG2821@2|Bacteria,1MXD4@1224|Proteobacteria,2TS5S@28211|Alphaproteobacteria,2K0IG@204457|Sphingomonadales	204457|Sphingomonadales	M	membrane-bound lytic murein transglycosylase	mltA	-	-	ko:K08304	-	-	-	-	ko00000,ko01000,ko01011	-	GH102	-	3D,MltA
SRD3_k127_2814247_7	1112216.JH594425_gene130	1.271e-61	222.0	COG2840@1|root,COG2840@2|Bacteria,1RH34@1224|Proteobacteria,2UCM1@28211|Alphaproteobacteria,2K652@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	Smr
SRD3_k127_2814247_0	1112212.JH584235_gene3410	2.484e-269	838.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,2K2DF@204457|Sphingomonadales	204457|Sphingomonadales	T	response regulator	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF
SRD3_k127_2837615_0	1470591.BW41_02001	0.0	1024.0	COG1472@1|root,COG1472@2|Bacteria,1MVIV@1224|Proteobacteria,2TS28@28211|Alphaproteobacteria,2JZVY@204457|Sphingomonadales	204457|Sphingomonadales	G	Belongs to the glycosyl hydrolase 3 family	-	-	3.2.1.21	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GH3	-	Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C
SRD3_k127_2837615_16	401053.AciPR4_2802	9.695e-56	207.0	COG1506@1|root,COG1506@2|Bacteria,3Y357@57723|Acidobacteria,2JIKY@204432|Acidobacteriia	204432|Acidobacteriia	E	Tannase and feruloyl esterase	-	-	-	-	-	-	-	-	-	-	-	-	Tannase
SRD3_k127_2837615_5	864069.MicloDRAFT_00013560	4.034e-193	623.0	28JZQ@1|root,2Z9PN@2|Bacteria,1N2WN@1224|Proteobacteria,2U0QD@28211|Alphaproteobacteria,1JQRW@119045|Methylobacteriaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2837615_18	114615.BRADO2586	7.669e-34	135.0	2CIU6@1|root,32S8H@2|Bacteria,1MZTN@1224|Proteobacteria,2UCA8@28211|Alphaproteobacteria,3JZTW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2837615_7	426355.Mrad2831_4048	5.259e-158	514.0	COG3185@1|root,COG3185@2|Bacteria,1MVR0@1224|Proteobacteria,2TTAD@28211|Alphaproteobacteria,1JSM3@119045|Methylobacteriaceae	28211|Alphaproteobacteria	E	Pfam:DUF1446	-	-	-	-	-	-	-	-	-	-	-	-	AtuA
SRD3_k127_2837615_8	366602.Caul_3293	2.201e-155	503.0	COG2851@1|root,COG2851@2|Bacteria,1N25B@1224|Proteobacteria,2TT6T@28211|Alphaproteobacteria	28211|Alphaproteobacteria	C	Citrate transporter	-	-	-	ko:K03300	-	-	-	-	ko00000	2.A.11	-	-	CitMHS
SRD3_k127_2837615_9	702113.PP1Y_Mpl246	1.02e-154	527.0	COG1629@1|root,COG4206@1|root,COG1629@2|Bacteria,COG4206@2|Bacteria,1QU0Y@1224|Proteobacteria	1224|Proteobacteria	HP	Outer membrane receptor proteins mostly Fe transport	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SRD3_k127_2837615_3	194867.ALBQ01000005_gene1661	5.253e-245	769.0	COG2272@1|root,COG2272@2|Bacteria,1MVQZ@1224|Proteobacteria,2TUA9@28211|Alphaproteobacteria,2K1A5@204457|Sphingomonadales	204457|Sphingomonadales	I	Belongs to the type-B carboxylesterase lipase family	-	-	-	ko:K03929	-	-	-	-	ko00000,ko01000	-	CE10	-	COesterase
SRD3_k127_2837615_15	1217720.ALOX01000069_gene3603	1.567e-59	227.0	COG0583@1|root,COG0583@2|Bacteria,1MUWX@1224|Proteobacteria,2TU0X@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SRD3_k127_2837615_1	366602.Caul_3288	1.75e-255	810.0	COG1472@1|root,COG1472@2|Bacteria,1MVIV@1224|Proteobacteria,2TS28@28211|Alphaproteobacteria,2KHXB@204458|Caulobacterales	204458|Caulobacterales	G	PFAM glycoside hydrolase family 3 domain protein	-	-	3.2.1.21	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GH3	-	Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C
SRD3_k127_2837615_13	13690.CP98_04292	6.513e-115	387.0	COG0642@1|root,COG2205@2|Bacteria,1MUAK@1224|Proteobacteria,2TSUC@28211|Alphaproteobacteria,2K1M1@204457|Sphingomonadales	204457|Sphingomonadales	T	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
SRD3_k127_2837615_14	1219045.BV98_003341	2.311e-73	255.0	COG0745@1|root,COG0745@2|Bacteria,1MY3D@1224|Proteobacteria,2U8QP@28211|Alphaproteobacteria,2K2QR@204457|Sphingomonadales	204457|Sphingomonadales	KT	Transcriptional regulatory protein, C terminal	-	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
SRD3_k127_2837615_4	1081640.AGFU01000075_gene3337	4.894e-244	760.0	COG1004@1|root,COG1004@2|Bacteria,1MW5U@1224|Proteobacteria,2TREV@28211|Alphaproteobacteria,2K1AN@204457|Sphingomonadales	204457|Sphingomonadales	M	Belongs to the UDP-glucose GDP-mannose dehydrogenase family	-	-	1.1.1.22	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	M00014,M00129,M00361,M00362	R00286	RC00291	ko00000,ko00001,ko00002,ko01000	-	-	-	UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N
SRD3_k127_2837615_2	702113.PP1Y_AT11682	3.251e-253	787.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,2JZVD@204457|Sphingomonadales	204457|Sphingomonadales	C	belongs to the aldehyde dehydrogenase family	-	-	1.2.1.3	ko:K00128	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	M00135	R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
SRD3_k127_2837615_6	1192759.AKIB01000026_gene2145	1.624e-161	511.0	COG0625@1|root,COG0625@2|Bacteria,1Q5XX@1224|Proteobacteria,2U18C@28211|Alphaproteobacteria,2K8H4@204457|Sphingomonadales	204457|Sphingomonadales	O	Glutathione S-transferase, N-terminal domain	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_N_3
SRD3_k127_2837615_10	702113.PP1Y_AT11664	2.14e-148	482.0	COG0625@1|root,COG0625@2|Bacteria,1RD7K@1224|Proteobacteria,2TVIB@28211|Alphaproteobacteria,2K59I@204457|Sphingomonadales	204457|Sphingomonadales	O	Glutathione S-transferase, N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	GST_N_3
SRD3_k127_2837615_11	1192759.AKIB01000026_gene2146	6.597e-143	456.0	COG0625@1|root,COG0625@2|Bacteria,1R6UY@1224|Proteobacteria,2U1WS@28211|Alphaproteobacteria,2K8ZE@204457|Sphingomonadales	204457|Sphingomonadales	O	Glutathione S-transferase, C-terminal domain	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_N_3
SRD3_k127_2837615_12	1192759.AKIB01000026_gene2147	5.71e-119	388.0	COG0625@1|root,COG0625@2|Bacteria,1MUN3@1224|Proteobacteria,2TTVR@28211|Alphaproteobacteria,2K4IG@204457|Sphingomonadales	204457|Sphingomonadales	O	Glutathione S-transferase, C-terminal domain	-	-	-	ko:K11209	-	-	-	-	ko00000,ko01000	-	-	-	GST_C,GST_N
SRD3_k127_2837615_17	1192759.AKIB01000026_gene2158	1.822e-47	173.0	COG1396@1|root,COG1396@2|Bacteria,1MUG2@1224|Proteobacteria,2TR3R@28211|Alphaproteobacteria,2K94Y@204457|Sphingomonadales	204457|Sphingomonadales	K	Helix-turn-helix XRE-family like proteins	-	-	-	-	-	-	-	-	-	-	-	-	HTH_31
SRD3_k127_2838218_4	633149.Bresu_2079	2.625e-11	72.0	COG0664@1|root,COG0664@2|Bacteria,1MXID@1224|Proteobacteria,2U1G1@28211|Alphaproteobacteria,2KJAP@204458|Caulobacterales	204458|Caulobacterales	K	Crp-like helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,cNMP_binding
SRD3_k127_2838218_3	685778.AORL01000015_gene2440	8.453e-178	575.0	COG0457@1|root,COG0457@2|Bacteria,1R3PU@1224|Proteobacteria,2U3HS@28211|Alphaproteobacteria,2K9SW@204457|Sphingomonadales	204457|Sphingomonadales	S	Sulfotransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Sulfotransfer_3
SRD3_k127_2838218_2	685778.AORL01000015_gene2438	1.221e-258	807.0	COG1263@1|root,COG1264@1|root,COG1263@2|Bacteria,COG1264@2|Bacteria,1MY1V@1224|Proteobacteria,2U1WG@28211|Alphaproteobacteria,2K09Z@204457|Sphingomonadales	204457|Sphingomonadales	G	Phosphotransferase system, EIIC	nagE	-	2.7.1.193	ko:K02803,ko:K02804	ko00520,ko02060,map00520,map02060	M00267	R05199	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.1.1.15,4.A.1.1.2,4.A.1.1.5,4.A.1.1.7	-	-	PTS_EIIB,PTS_EIIC
SRD3_k127_2838218_1	685778.AORL01000015_gene2437	3.621e-265	842.0	COG1080@1|root,COG1080@2|Bacteria,1MUT8@1224|Proteobacteria,2TR28@28211|Alphaproteobacteria,2K11Y@204457|Sphingomonadales	204457|Sphingomonadales	G	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1	-	-	-	ko:K11189	-	-	-	-	ko00000,ko02000	4.A.2.1	-	-	PEP-utilisers_N,PEP-utilizers,PEP-utilizers_C,PTS-HPr,PTS_EIIA_1
SRD3_k127_2838218_0	685778.AORL01000015_gene2436	1.381e-293	915.0	COG3525@1|root,COG3525@2|Bacteria,1MVDE@1224|Proteobacteria,2TSK6@28211|Alphaproteobacteria,2K1S6@204457|Sphingomonadales	204457|Sphingomonadales	G	Glycosyl hydrolase family 20, catalytic domain	-	-	3.2.1.52	ko:K12373	ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142	M00079	R00022,R06004,R11316	RC00049	ko00000,ko00001,ko00002,ko01000,ko03110	-	GH20	-	CHB_HEX_C_1,Fn3_assoc,Glyco_hydro_20,Glyco_hydro_20b
SRD3_k127_2893731_3	1449076.JOOE01000003_gene3505	3.467e-207	646.0	COG0082@1|root,COG0082@2|Bacteria,1MU98@1224|Proteobacteria,2TQY2@28211|Alphaproteobacteria,2K0X4@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system	aroC	-	4.2.3.5	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R01714	RC00586	ko00000,ko00001,ko00002,ko01000	-	-	-	Chorismate_synt
SRD3_k127_2893731_8	1081640.AGFU01000001_gene487	4.4e-83	288.0	COG2010@1|root,COG2010@2|Bacteria,1NEUK@1224|Proteobacteria,2UIJ4@28211|Alphaproteobacteria,2K4RI@204457|Sphingomonadales	204457|Sphingomonadales	C	Cytochrome C oxidase, cbb3-type, subunit III	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,Cytochrome_CBB3
SRD3_k127_2893731_1	1112216.JH594425_gene1557	1.62e-260	805.0	COG0104@1|root,COG0104@2|Bacteria,1MU5B@1224|Proteobacteria,2TRKY@28211|Alphaproteobacteria,2K0T7@204457|Sphingomonadales	204457|Sphingomonadales	F	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP	purA	-	6.3.4.4	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	M00049	R01135	RC00458,RC00459	ko00000,ko00001,ko00002,ko01000	-	-	-	Adenylsucc_synt
SRD3_k127_2893731_4	1112212.JH584235_gene1824	5.044e-194	610.0	COG3705@1|root,COG3705@2|Bacteria,1MWIG@1224|Proteobacteria,2TSVG@28211|Alphaproteobacteria,2K0AG@204457|Sphingomonadales	204457|Sphingomonadales	E	tRNA synthetase, class II	hisZ	-	-	ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R01071	RC02819,RC03200	ko00000,ko00001,ko00002	-	-	-	tRNA-synt_His
SRD3_k127_2893731_0	194867.ALBQ01000014_gene441	1.077e-302	937.0	COG0111@1|root,COG0111@2|Bacteria,1MU5Z@1224|Proteobacteria,2TR0F@28211|Alphaproteobacteria,2K0J0@204457|Sphingomonadales	204457|Sphingomonadales	E	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family	serA	-	1.1.1.399,1.1.1.95	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R01513	RC00031	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh,2-Hacid_dh_C,ACT
SRD3_k127_2893731_2	1112212.JH584235_gene1821	3.84e-223	697.0	COG1932@1|root,COG1932@2|Bacteria,1MUB5@1224|Proteobacteria,2TSHT@28211|Alphaproteobacteria,2K0J1@204457|Sphingomonadales	204457|Sphingomonadales	EH	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine	serC	-	2.6.1.52	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	M00020,M00124	R04173,R05085	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_5
SRD3_k127_2893731_11	59538.XP_005966177.1	0.0004631	45.0	COG1932@1|root,KOG2790@2759|Eukaryota,3APHY@33154|Opisthokonta	59538.XP_005966177.1|-	EH	Aminotransferase class-V	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_2893731_9	1112212.JH584235_gene1820	4.406e-37	154.0	2AZX3@1|root,31S6U@2|Bacteria,1RJH6@1224|Proteobacteria,2UDV0@28211|Alphaproteobacteria,2K7CI@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF4328)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4328
SRD3_k127_2893731_6	1163408.UU9_04447	4.531e-119	401.0	COG0657@1|root,COG0657@2|Bacteria,1RFFG@1224|Proteobacteria	1224|Proteobacteria	I	alpha/beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3
SRD3_k127_2893731_7	1112214.AHIS01000060_gene2864	1.703e-93	326.0	COG3921@1|root,COG3921@2|Bacteria,1N2I5@1224|Proteobacteria,2UCSC@28211|Alphaproteobacteria,2KDTA@204457|Sphingomonadales	204457|Sphingomonadales	S	Extensin-like protein C-terminus	-	-	-	-	-	-	-	-	-	-	-	-	Extensin-like_C
SRD3_k127_2893731_5	1090318.ATTI01000001_gene3280	6.397e-149	475.0	COG1611@1|root,COG1611@2|Bacteria,1MU6N@1224|Proteobacteria,2TR90@28211|Alphaproteobacteria,2K00V@204457|Sphingomonadales	204457|Sphingomonadales	S	Rossmann fold nucleotide-binding protein	-	-	3.2.2.10	ko:K06966	ko00230,ko00240,map00230,map00240	-	R00182,R00510	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	Lysine_decarbox
SRD3_k127_2893731_10	1549858.MC45_10445	1.351e-06	52.0	COG3474@1|root,COG3474@2|Bacteria,1RIDN@1224|Proteobacteria,2U142@28211|Alphaproteobacteria,2K42S@204457|Sphingomonadales	204457|Sphingomonadales	C	cytochrome C	-	-	-	ko:K08738	ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	3.D.4.6	-	-	Cytochrom_C
SRD3_k127_2917917_2	1112214.AHIS01000094_gene606	4.212e-287	906.0	COG4206@1|root,COG4206@2|Bacteria,1MXFM@1224|Proteobacteria,2TWYV@28211|Alphaproteobacteria,2K14T@204457|Sphingomonadales	204457|Sphingomonadales	H	Outer membrane receptor proteins, mostly Fe transport	-	-	-	-	-	-	-	-	-	-	-	-	TonB_dep_Rec
SRD3_k127_2917917_4	1112212.JH584235_gene835	3.953e-141	454.0	COG1940@1|root,COG1940@2|Bacteria,1R7YN@1224|Proteobacteria,2TUWX@28211|Alphaproteobacteria,2K1T7@204457|Sphingomonadales	204457|Sphingomonadales	GK	Transcriptional regulator sugar kinase	-	-	2.7.1.4	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	-	R00760,R00867,R03920	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	ROK
SRD3_k127_2917917_1	1112212.JH584235_gene834	2.709e-299	929.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2UP9M@28211|Alphaproteobacteria,2KCKU@204457|Sphingomonadales	204457|Sphingomonadales	T	Putative diguanylate phosphodiesterase	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,Response_reg
SRD3_k127_2917917_3	1112212.JH584235_gene833	7.284e-253	794.0	COG3322@1|root,COG4191@1|root,COG3322@2|Bacteria,COG4191@2|Bacteria,1NVWZ@1224|Proteobacteria,2VCHF@28211|Alphaproteobacteria,2K2C8@204457|Sphingomonadales	204457|Sphingomonadales	T	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain	-	-	-	-	-	-	-	-	-	-	-	-	CHASE4,HAMP,HATPase_c
SRD3_k127_2917917_0	1502850.FG91_00770	0.0	1020.0	COG0480@1|root,COG0480@2|Bacteria,1MU2W@1224|Proteobacteria,2TYVK@28211|Alphaproteobacteria,2K1XU@204457|Sphingomonadales	204457|Sphingomonadales	J	Elongation factor G, domain IV	-	-	-	ko:K02355	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	EFG_C,EFG_II,EFG_IV,GTP_EFTU
SRD3_k127_2917917_5	392499.Swit_4613	2.574e-83	282.0	COG3104@1|root,COG3104@2|Bacteria,1MW6W@1224|Proteobacteria,2U15C@28211|Alphaproteobacteria,2K2WX@204457|Sphingomonadales	204457|Sphingomonadales	E	amino acid peptide transporter	-	-	-	ko:K03305	-	-	-	-	ko00000	2.A.17	-	-	PTR2
SRD3_k127_2935927_1	1030157.AFMP01000031_gene3021	1.418e-14	73.0	COG1294@1|root,COG1294@2|Bacteria,1MURP@1224|Proteobacteria,2TU3I@28211|Alphaproteobacteria,2K0H9@204457|Sphingomonadales	204457|Sphingomonadales	C	oxidase, subunit	cydB	-	1.10.3.14	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cyt_bd_oxida_II
SRD3_k127_2935927_0	29581.BW37_00147	1.266e-62	229.0	COG1835@1|root,COG1835@2|Bacteria,1NCI4@1224|Proteobacteria,2W48Y@28216|Betaproteobacteria,4787Y@75682|Oxalobacteraceae	28216|Betaproteobacteria	I	Acyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
SRD3_k127_2954596_2	1112216.JH594425_gene494	6.555e-119	390.0	COG1052@1|root,COG1052@2|Bacteria,1MU2D@1224|Proteobacteria,2TTJV@28211|Alphaproteobacteria,2K0IQ@204457|Sphingomonadales	204457|Sphingomonadales	CH	D-isomer specific 2-hydroxyacid dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	2-Hacid_dh,2-Hacid_dh_C
SRD3_k127_2954596_1	1449076.JOOE01000004_gene446	1.999e-200	626.0	COG2255@1|root,COG2255@2|Bacteria,1MU38@1224|Proteobacteria,2TQNG@28211|Alphaproteobacteria,2K0Y3@204457|Sphingomonadales	204457|Sphingomonadales	L	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing	ruvB	-	3.6.4.12	ko:K03551	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	RuvB_C,RuvB_N
SRD3_k127_2954596_0	1112216.JH594425_gene492	5.545e-244	758.0	COG3605@1|root,COG3605@2|Bacteria,1QTTV@1224|Proteobacteria,2TR3Z@28211|Alphaproteobacteria,2K17Q@204457|Sphingomonadales	204457|Sphingomonadales	T	Belongs to the PEP-utilizing enzyme family	ptsP	-	2.7.3.9	ko:K08484	ko02060,map02060	-	-	-	ko00000,ko00001,ko01000,ko02000	-	-	-	GAF_2,PEP-utilisers_N,PEP-utilizers,PEP-utilizers_C
SRD3_k127_2991159_2	1112212.JH584235_gene856	1.121e-96	318.0	COG2128@1|root,COG2128@2|Bacteria,1RDRU@1224|Proteobacteria,2U8D7@28211|Alphaproteobacteria,2K15E@204457|Sphingomonadales	204457|Sphingomonadales	O	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	ahpD	-	-	ko:K04756	-	-	-	-	ko00000	-	-	-	CMD
SRD3_k127_2991159_0	1112214.AHIS01000099_gene1437	8.813e-128	412.0	COG0730@1|root,COG0730@2|Bacteria,1PGTZ@1224|Proteobacteria,2U5IZ@28211|Alphaproteobacteria,2K1II@204457|Sphingomonadales	204457|Sphingomonadales	S	membrane transporter protein	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
SRD3_k127_2991159_1	1112212.JH584235_gene855	1.733e-124	401.0	COG1045@1|root,COG1045@2|Bacteria,1MVFX@1224|Proteobacteria,2TQQ5@28211|Alphaproteobacteria,2K2GH@204457|Sphingomonadales	204457|Sphingomonadales	E	serine acetyltransferase	cysE	-	2.3.1.30	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	M00021	R00586	RC00004,RC00041	ko00000,ko00001,ko00002,ko01000	-	-	-	Hexapep
SRD3_k127_2991159_3	1112212.JH584235_gene854	9.286e-51	181.0	2CCMQ@1|root,32RW3@2|Bacteria,1MZHB@1224|Proteobacteria,2UCC9@28211|Alphaproteobacteria,2K53Z@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF2794)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2794
SRD3_k127_300102_0	1112212.JH584235_gene412	1.357e-199	625.0	COG3173@1|root,COG3173@2|Bacteria,1MWAK@1224|Proteobacteria,2TT2N@28211|Alphaproteobacteria,2K142@204457|Sphingomonadales	204457|Sphingomonadales	S	Aminoglycoside phosphotransferase	-	-	-	-	-	-	-	-	-	-	-	-	APH
SRD3_k127_300102_1	1090320.KB900605_gene2240	1.446e-190	600.0	COG1062@1|root,COG1062@2|Bacteria,1MUK4@1224|Proteobacteria,2TU1G@28211|Alphaproteobacteria,2K0RB@204457|Sphingomonadales	204457|Sphingomonadales	C	alcohol dehydrogenase	-	-	1.1.1.1,1.1.1.284	ko:K00121	ko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204	-	R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R06983,R07105,R08281,R08306,R08310	RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01715,RC01734,RC02273	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_zinc_N
SRD3_k127_300102_2	1090320.KB900605_gene2239	4.847e-09	57.0	COG1960@1|root,COG1960@2|Bacteria,1MU2V@1224|Proteobacteria,2TSK3@28211|Alphaproteobacteria,2JZVP@204457|Sphingomonadales	204457|Sphingomonadales	I	acyl-CoA dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SRD3_k127_3004750_1	46429.BV95_04148	4.607e-45	164.0	COG5637@1|root,COG5637@2|Bacteria,1MZY2@1224|Proteobacteria,2UCNC@28211|Alphaproteobacteria,2KACN@204457|Sphingomonadales	204457|Sphingomonadales	S	polyketide cyclase	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3004750_0	1123269.NX02_01685	0.0	1666.0	COG0204@1|root,COG0318@1|root,COG0477@1|root,COG0204@2|Bacteria,COG0318@2|Bacteria,COG2814@2|Bacteria,1MWDY@1224|Proteobacteria,2TTGI@28211|Alphaproteobacteria,2KEN3@204457|Sphingomonadales	204457|Sphingomonadales	I	Phosphate acyltransferases	aas	-	2.3.1.40,6.2.1.20	ko:K05939	ko00071,ko00564,map00071,map00564	-	R01406,R04864	RC00014,RC00039,RC00041	ko00000,ko00001,ko01000	-	-	-	AMP-binding,AMP-binding_C,Acyltransferase,MFS_1
SRD3_k127_3012009_1	1294143.H681_24710	2.624e-144	488.0	COG1729@1|root,COG1729@2|Bacteria,1MWT4@1224|Proteobacteria,1RMEV@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3012009_5	216595.PFLU_0132	9.784e-82	278.0	28NUH@1|root,2ZBSW@2|Bacteria,1RB9W@1224|Proteobacteria,1RYX5@1236|Gammaproteobacteria,1YPKG@136843|Pseudomonas fluorescens group	1236|Gammaproteobacteria	S	Protein of unknown function (DUF3142)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3142
SRD3_k127_3012009_0	1112212.JH584235_gene904	2.197e-192	604.0	COG0334@1|root,COG0334@2|Bacteria,1MUXS@1224|Proteobacteria,2VGKD@28211|Alphaproteobacteria,2K0AY@204457|Sphingomonadales	204457|Sphingomonadales	E	Belongs to the Glu Leu Phe Val dehydrogenases family	-	-	1.4.1.9	ko:K00263	ko00280,ko00290,ko01100,ko01110,ko01130,map00280,map00290,map01100,map01110,map01130	-	R01088,R01434,R02196	RC00006,RC00036	ko00000,ko00001,ko01000	-	-	-	ELFV_dehydrog,ELFV_dehydrog_N
SRD3_k127_3012009_4	1112212.JH584235_gene905	2.079e-92	312.0	2EGH8@1|root,33A9B@2|Bacteria,1N50Q@1224|Proteobacteria,2VGSV@28211|Alphaproteobacteria,2KE61@204457|Sphingomonadales	204457|Sphingomonadales	S	Type II secretion system (T2SS), protein N	-	-	-	ko:K02463	ko05111,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	T2SSN
SRD3_k127_3012009_7	1112212.JH584235_gene906	1.486e-37	148.0	COG3149@1|root,COG3149@2|Bacteria,1NGFT@1224|Proteobacteria,2UM4J@28211|Alphaproteobacteria,2K65I@204457|Sphingomonadales	204457|Sphingomonadales	U	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins	gspM	-	-	ko:K02462	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	T2SSM
SRD3_k127_3012009_2	1112214.AHIS01000095_gene770	1.853e-127	420.0	COG3297@1|root,COG3297@2|Bacteria,1N0FQ@1224|Proteobacteria,2UEET@28211|Alphaproteobacteria,2K35M@204457|Sphingomonadales	204457|Sphingomonadales	U	Type II secretion system (T2SS), protein L	gspL	-	-	ko:K02461	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	GspL_C,T2SSL
SRD3_k127_3012009_3	1112216.JH594425_gene3345	4.029e-126	413.0	COG3156@1|root,COG3156@2|Bacteria,1RBNV@1224|Proteobacteria,2VG9Z@28211|Alphaproteobacteria,2KE2D@204457|Sphingomonadales	204457|Sphingomonadales	U	Type II secretion system (T2SS), protein K	-	-	-	ko:K02460	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	T2SSK
SRD3_k127_3012009_6	1112212.JH584235_gene909	1.546e-78	267.0	COG4795@1|root,COG4795@2|Bacteria,1RJAE@1224|Proteobacteria,2UAXM@28211|Alphaproteobacteria,2K56Q@204457|Sphingomonadales	204457|Sphingomonadales	U	General secretion pathway protein	gspJ	-	-	ko:K02459	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	N_methyl,T2SSJ
SRD3_k127_305501_0	1088721.NSU_3345	0.0	1015.0	COG4774@1|root,COG4774@2|Bacteria,1R5EH@1224|Proteobacteria,2UQHJ@28211|Alphaproteobacteria,2KDTT@204457|Sphingomonadales	204457|Sphingomonadales	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SRD3_k127_305501_8	1088721.NSU_3344	1.578e-106	356.0	COG1234@1|root,COG1234@2|Bacteria,1R64Z@1224|Proteobacteria,2VFRT@28211|Alphaproteobacteria,2KDYK@204457|Sphingomonadales	204457|Sphingomonadales	S	Beta-lactamase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_2
SRD3_k127_305501_4	1144307.PMI04_03191	4.111e-176	557.0	COG0654@1|root,COG0654@2|Bacteria,1MWWT@1224|Proteobacteria,2TRZP@28211|Alphaproteobacteria,2K12Z@204457|Sphingomonadales	204457|Sphingomonadales	CH	FAD binding domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3
SRD3_k127_305501_5	517722.AEUE01000004_gene884	1.451e-168	532.0	COG0346@1|root,COG0346@2|Bacteria,1MUBT@1224|Proteobacteria,2VG62@28211|Alphaproteobacteria,2KE1S@204457|Sphingomonadales	204457|Sphingomonadales	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
SRD3_k127_305501_1	1550073.JROH01000018_gene439	5.06e-213	671.0	COG1073@1|root,COG1073@2|Bacteria,1MXJ3@1224|Proteobacteria,2TVHP@28211|Alphaproteobacteria,2K0QE@204457|Sphingomonadales	204457|Sphingomonadales	E	Alpha/beta hydrolase of unknown function (DUF1100)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1100,Peptidase_S9
SRD3_k127_305501_19	1088721.NSU_3340	4.925e-35	139.0	28VWN@1|root,2ZHY0@2|Bacteria,1N6T9@1224|Proteobacteria,2UGAP@28211|Alphaproteobacteria,2K77P@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_305501_12	1331060.RLDS_20770	9.701e-94	310.0	COG0662@1|root,COG0662@2|Bacteria,1QU63@1224|Proteobacteria,2TW18@28211|Alphaproteobacteria,2KEM4@204457|Sphingomonadales	204457|Sphingomonadales	G	PFAM Cupin 2, conserved barrel domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
SRD3_k127_305501_7	517722.AEUE01000004_gene879	1.669e-141	456.0	COG0179@1|root,COG0179@2|Bacteria,1MV0V@1224|Proteobacteria,2TQYU@28211|Alphaproteobacteria,2K2VH@204457|Sphingomonadales	204457|Sphingomonadales	Q	COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)	-	-	3.7.1.2	ko:K16171	ko00350,ko00643,ko01100,ko01120,map00350,map00643,map01100,map01120	M00044	R01364	RC00326,RC00446	ko00000,ko00001,ko00002,ko01000	-	-	-	FAA_hydrolase
SRD3_k127_305501_10	1112214.AHIS01000105_gene4043	5.357e-97	320.0	COG0235@1|root,COG0235@2|Bacteria,1RE8T@1224|Proteobacteria,2U93H@28211|Alphaproteobacteria,2K2VG@204457|Sphingomonadales	204457|Sphingomonadales	G	Class II Aldolase and Adducin N-terminal domain	mtnB	-	4.2.1.109	ko:K08964	ko00270,ko01100,map00270,map01100	M00034	R07392	RC01939	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldolase_II
SRD3_k127_305501_14	1112214.AHIS01000105_gene4044	1.555e-88	295.0	COG1791@1|root,COG1791@2|Bacteria,1RCZD@1224|Proteobacteria,2U761@28211|Alphaproteobacteria,2K480@204457|Sphingomonadales	204457|Sphingomonadales	S	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway	mtnD	-	1.13.11.53,1.13.11.54	ko:K08967	ko00270,ko01100,map00270,map01100	M00034	R07363,R07364	RC01866,RC02018,RC02118	ko00000,ko00001,ko00002,ko01000	-	-	-	ARD
SRD3_k127_305501_9	1112212.JH584235_gene1572	1.136e-102	336.0	COG4229@1|root,COG4229@2|Bacteria,1R3V9@1224|Proteobacteria,2U7E2@28211|Alphaproteobacteria,2K41G@204457|Sphingomonadales	204457|Sphingomonadales	C	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)	-	-	3.1.3.77	ko:K09880	ko00270,ko01100,map00270,map01100	M00034	R07395	RC02779	ko00000,ko00001,ko00002,ko01000	-	-	-	-
SRD3_k127_305501_3	1112212.JH584235_gene1573	8.731e-197	616.0	COG0182@1|root,COG0182@2|Bacteria,1MUPM@1224|Proteobacteria,2TSPP@28211|Alphaproteobacteria,2K2KJ@204457|Sphingomonadales	204457|Sphingomonadales	J	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)	mtnA	-	5.3.1.23	ko:K08963	ko00270,ko01100,map00270,map01100	M00034	R04420	RC01151	ko00000,ko00001,ko00002,ko01000	-	-	-	IF-2B
SRD3_k127_305501_2	1112212.JH584235_gene1574	4.034e-206	653.0	COG0436@1|root,COG0436@2|Bacteria,1MW0Z@1224|Proteobacteria,2TTGJ@28211|Alphaproteobacteria,2K0KM@204457|Sphingomonadales	204457|Sphingomonadales	E	Aminotransferase	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_1_2
SRD3_k127_305501_11	1550073.JROH01000003_gene2436	2.575e-96	337.0	COG0237@1|root,COG0237@2|Bacteria,1QWIR@1224|Proteobacteria	1224|Proteobacteria	H	dephospho-CoA kinase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_305501_13	1550073.JROH01000003_gene2435	4.301e-90	313.0	28N1N@1|root,2ZB7Q@2|Bacteria,1R86T@1224|Proteobacteria,2U0A6@28211|Alphaproteobacteria,2KANG@204457|Sphingomonadales	204457|Sphingomonadales	H	Sulfotransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Sulfotransfer_1
SRD3_k127_305501_22	102129.Lepto7375DRAFT_6653	1.514e-10	64.0	2DRDY@1|root,33BC0@2|Bacteria,1G9R7@1117|Cyanobacteria,1HCUI@1150|Oscillatoriales	1117|Cyanobacteria	S	Coenzyme PQQ synthesis protein D (PqqD)	-	-	-	-	-	-	-	-	-	-	-	-	PqqD
SRD3_k127_305501_20	595536.ADVE02000001_gene1442	2.674e-34	138.0	29XVG@1|root,30JMR@2|Bacteria,1Q3EW@1224|Proteobacteria,2VC3U@28211|Alphaproteobacteria,37154@31993|Methylocystaceae	28211|Alphaproteobacteria	S	Transglutaminase-like superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Transglut_core3
SRD3_k127_305501_21	118173.KB235914_gene763	1.832e-15	80.0	2EJ72@1|root,33CY7@2|Bacteria,1GB8K@1117|Cyanobacteria	1117|Cyanobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_305501_17	1550073.JROH01000003_gene2428	3.216e-41	159.0	COG0454@1|root,COG0456@2|Bacteria,1N29T@1224|Proteobacteria,2UF3Q@28211|Alphaproteobacteria,2K74H@204457|Sphingomonadales	204457|Sphingomonadales	K	Acetyltransferase (GNAT) family	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10
SRD3_k127_305501_18	1089547.KB913013_gene1408	6.116e-41	164.0	COG4675@1|root,COG4675@2|Bacteria,4NQJR@976|Bacteroidetes,47QBA@768503|Cytophagia	976|Bacteroidetes	S	Phage Tail Collar Domain	-	-	-	-	-	-	-	-	-	-	-	-	Collar
SRD3_k127_305501_15	215803.DB30_4073	9.904e-58	206.0	COG4675@1|root,COG4675@2|Bacteria,1MZY9@1224|Proteobacteria,42UGR@68525|delta/epsilon subdivisions,2WR3D@28221|Deltaproteobacteria,2Z0AA@29|Myxococcales	28221|Deltaproteobacteria	S	Phage Tail Collar	-	-	-	-	-	-	-	-	-	-	-	-	Collar
SRD3_k127_305501_16	1121382.JQKG01000054_gene2128	2.553e-53	192.0	COG4675@1|root,COG4675@2|Bacteria,1WMKD@1297|Deinococcus-Thermus	1297|Deinococcus-Thermus	S	Phage Tail Collar Domain	-	-	-	-	-	-	-	-	-	-	-	-	Collar
SRD3_k127_305501_6	1550073.JROH01000003_gene2432	3.461e-163	528.0	COG0367@1|root,COG0367@2|Bacteria,1MW4E@1224|Proteobacteria,2TSCY@28211|Alphaproteobacteria,2K6H5@204457|Sphingomonadales	204457|Sphingomonadales	E	Glutamine amidotransferase domain	-	-	6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	-	R00578	RC00010	ko00000,ko00001,ko01000,ko01002	-	-	-	Asn_synthase,GATase_7
SRD3_k127_3069025_0	1112212.JH584235_gene1506	0.0	1216.0	COG0542@1|root,COG0542@2|Bacteria,1MV8B@1224|Proteobacteria,2TQUZ@28211|Alphaproteobacteria,2K0MN@204457|Sphingomonadales	204457|Sphingomonadales	O	Belongs to the ClpA ClpB family	clpA	-	-	ko:K03694	-	-	-	-	ko00000,ko03110	-	-	-	AAA,AAA_2,ClpB_D2-small,Clp_N
SRD3_k127_3069025_5	1112214.AHIS01000061_gene2824	1.228e-17	93.0	COG5509@1|root,COG5509@2|Bacteria,1NG8P@1224|Proteobacteria,2UJB2@28211|Alphaproteobacteria,2K7YT@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF1192)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1192
SRD3_k127_3069025_1	1379701.JPJC01000095_gene2336	2.906e-157	502.0	COG0604@1|root,COG0604@2|Bacteria,1MX8A@1224|Proteobacteria,2TR1J@28211|Alphaproteobacteria,2K115@204457|Sphingomonadales	204457|Sphingomonadales	C	NADPH quinone	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_zinc_N,ADH_zinc_N_2
SRD3_k127_3069025_6	1030157.AFMP01000031_gene3055	3.475e-07	60.0	2BR9C@1|root,32K7T@2|Bacteria,1PP91@1224|Proteobacteria,2V1RW@28211|Alphaproteobacteria,2KBYA@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3069025_4	1112212.JH584235_gene1510	1.347e-99	328.0	COG0625@1|root,COG0625@2|Bacteria,1REDI@1224|Proteobacteria,2TUGP@28211|Alphaproteobacteria,2KD16@204457|Sphingomonadales	204457|Sphingomonadales	O	Glutathione S-transferase, C-terminal domain	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_N
SRD3_k127_3069025_3	1123269.NX02_00155	2.525e-114	387.0	2DBWF@1|root,2ZBGE@2|Bacteria,1N7XE@1224|Proteobacteria,2TVVB@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Arylsulfotransferase (ASST)	-	-	-	-	-	-	-	-	-	-	-	-	Arylsulfotran_2
SRD3_k127_3069025_2	1112212.JH584235_gene1511	1.796e-135	433.0	COG2908@1|root,COG2908@2|Bacteria,1MVKD@1224|Proteobacteria,2TSEB@28211|Alphaproteobacteria,2K0Q8@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos,Metallophos_2
SRD3_k127_3109076_5	1007104.SUS17_3997	1.565e-20	103.0	COG1846@1|root,COG1846@2|Bacteria,1N2Q4@1224|Proteobacteria,2UC5A@28211|Alphaproteobacteria,2K54U@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_27,MarR
SRD3_k127_3109076_4	1379701.JPJC01000161_gene951	6.09e-24	106.0	2EP5S@1|root,33GSG@2|Bacteria,1NI0K@1224|Proteobacteria,2UK2B@28211|Alphaproteobacteria,2K7KA@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3109076_7	158500.BV97_04121	3.839e-09	64.0	COG2197@1|root,COG2197@2|Bacteria,1NMZW@1224|Proteobacteria,2VDU4@28211|Alphaproteobacteria,2K629@204457|Sphingomonadales	204457|Sphingomonadales	KT	Bacterial regulatory proteins, luxR family	-	-	-	-	-	-	-	-	-	-	-	-	GerE
SRD3_k127_3109076_6	13690.CP98_01526	1.159e-16	91.0	COG2010@1|root,COG2010@2|Bacteria,1NAT1@1224|Proteobacteria,2UGJN@28211|Alphaproteobacteria,2K13F@204457|Sphingomonadales	204457|Sphingomonadales	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3109076_1	629773.AORY01000014_gene2577	5.498e-162	523.0	COG2041@1|root,COG2041@2|Bacteria,1MX9E@1224|Proteobacteria,2TRK0@28211|Alphaproteobacteria,2K0UU@204457|Sphingomonadales	204457|Sphingomonadales	S	Mo-co oxidoreductase dimerisation domain	-	-	-	-	-	-	-	-	-	-	-	-	Mo-co_dimer,Oxidored_molyb
SRD3_k127_3109076_2	1112214.AHIS01000045_gene1874	1.533e-161	514.0	COG2855@1|root,COG2855@2|Bacteria,1MVIP@1224|Proteobacteria,2TVK9@28211|Alphaproteobacteria,2K1K1@204457|Sphingomonadales	204457|Sphingomonadales	S	Conserved hypothetical protein 698	-	-	-	-	-	-	-	-	-	-	-	-	Cons_hypoth698
SRD3_k127_3109076_3	1267005.KB911264_gene3200	9.677e-88	291.0	COG3837@1|root,COG3837@2|Bacteria,1N15Q@1224|Proteobacteria,2UDER@28211|Alphaproteobacteria,3N73T@45401|Hyphomicrobiaceae	28211|Alphaproteobacteria	S	Cupin domain	manC	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
SRD3_k127_3109076_0	1090318.ATTI01000001_gene923	0.0	1065.0	COG2931@1|root,COG2931@2|Bacteria,1MU7T@1224|Proteobacteria,2TRVY@28211|Alphaproteobacteria,2K0YG@204457|Sphingomonadales	204457|Sphingomonadales	Q	Haemolysin-type calcium-binding repeat (2 copies)	-	-	-	-	-	-	-	-	-	-	-	-	HemolysinCabind
SRD3_k127_3123779_2	1550073.JROH01000044_gene3137	2.569e-116	377.0	COG0074@1|root,COG0074@2|Bacteria,1MUGA@1224|Proteobacteria,2TQKB@28211|Alphaproteobacteria,2K1F5@204457|Sphingomonadales	204457|Sphingomonadales	C	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit	sucD	-	6.2.1.5	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00173,M00374,M00620	R00405,R02404	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	-	CoA_binding,Ligase_CoA
SRD3_k127_3123779_7	1112214.AHIS01000032_gene1088	2.796e-45	166.0	COG2827@1|root,COG2827@2|Bacteria,1MZME@1224|Proteobacteria,2UCNX@28211|Alphaproteobacteria,2K68E@204457|Sphingomonadales	204457|Sphingomonadales	L	endonuclease containing a URI domain	-	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
SRD3_k127_3123779_1	1112216.JH594425_gene189	7.452e-187	586.0	COG0039@1|root,COG0039@2|Bacteria,1MV57@1224|Proteobacteria,2TSV6@28211|Alphaproteobacteria,2K17I@204457|Sphingomonadales	204457|Sphingomonadales	C	Catalyzes the reversible oxidation of malate to oxaloacetate	mdh	-	1.1.1.37	ko:K00024	ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00012,M00168,M00173,M00346,M00374,M00620,M00740	R00342,R07136	RC00031	ko00000,ko00001,ko00002,ko01000	-	-	-	Ldh_1_C,Ldh_1_N
SRD3_k127_3123779_8	1112212.JH584235_gene3128	3.058e-30	129.0	2EGVF@1|root,31AZQ@2|Bacteria,1Q6M5@1224|Proteobacteria,2V645@28211|Alphaproteobacteria,2KBZ3@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3123779_5	1112212.JH584235_gene3127	6.949e-53	188.0	COG0393@1|root,COG0393@2|Bacteria,1N2F5@1224|Proteobacteria,2UDZU@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Belongs to the UPF0145 family	-	-	-	-	-	-	-	-	-	-	-	-	YbjQ_1
SRD3_k127_3123779_3	426355.Mrad2831_2367	9.302e-65	236.0	COG1835@1|root,COG1835@2|Bacteria,1R6TT@1224|Proteobacteria,2TT2X@28211|Alphaproteobacteria,1JYWK@119045|Methylobacteriaceae	28211|Alphaproteobacteria	I	Acyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
SRD3_k127_3123779_0	1112214.AHIS01000032_gene1086	2.476e-188	597.0	COG1485@1|root,COG1485@2|Bacteria,1MUUW@1224|Proteobacteria,2TRG1@28211|Alphaproteobacteria,2K2A7@204457|Sphingomonadales	204457|Sphingomonadales	S	AFG1 family ATPase	-	-	-	ko:K06916	-	-	-	-	ko00000,ko03036	-	-	-	AFG1_ATPase
SRD3_k127_3123779_4	1379701.JPJC01000112_gene491	9.827e-62	217.0	COG2050@1|root,COG2050@2|Bacteria,1MZPH@1224|Proteobacteria,2UDIQ@28211|Alphaproteobacteria,2K62E@204457|Sphingomonadales	204457|Sphingomonadales	Q	protein, possibly involved in aromatic compounds catabolism	-	-	-	-	-	-	-	-	-	-	-	-	4HBT
SRD3_k127_3123779_6	1112216.JH594425_gene192	2.031e-45	164.0	COG0479@1|root,COG0479@2|Bacteria,1MVHS@1224|Proteobacteria,2TQYF@28211|Alphaproteobacteria,2K0CN@204457|Sphingomonadales	204457|Sphingomonadales	C	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family	sdhB	-	1.3.5.1,1.3.5.4	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2_3,Fer4_17
SRD3_k127_3157585_3	1101192.KB910516_gene3128	4.181e-45	164.0	COG0583@1|root,COG0583@2|Bacteria,1MU2E@1224|Proteobacteria,2TUNU@28211|Alphaproteobacteria,1JRZK@119045|Methylobacteriaceae	28211|Alphaproteobacteria	K	PFAM regulatory protein LysR	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SRD3_k127_3157585_0	1449076.JOOE01000001_gene2870	4.067e-212	667.0	COG0557@1|root,COG0557@2|Bacteria,1R4RK@1224|Proteobacteria,2TTRC@28211|Alphaproteobacteria,2K2TK@204457|Sphingomonadales	204457|Sphingomonadales	K	RNB	-	-	-	-	-	-	-	-	-	-	-	-	RNB
SRD3_k127_3157585_1	1120705.FG95_00626	2.64e-117	397.0	COG2199@1|root,COG2199@2|Bacteria,1R49V@1224|Proteobacteria,2TTDC@28211|Alphaproteobacteria,2K4KD@204457|Sphingomonadales	204457|Sphingomonadales	T	diguanylate cyclase	-	-	-	-	-	-	-	-	-	-	-	-	GGDEF
SRD3_k127_3157585_2	1449076.JOOE01000004_gene554	1.067e-48	182.0	COG0457@1|root,COG0457@2|Bacteria,1RFRI@1224|Proteobacteria,2UK5F@28211|Alphaproteobacteria,2K4NJ@204457|Sphingomonadales	204457|Sphingomonadales	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3167291_1	1112212.JH584235_gene2111	6.337e-151	479.0	COG4301@1|root,COG4301@2|Bacteria,1MUCG@1224|Proteobacteria,2TRMH@28211|Alphaproteobacteria,2K0WW@204457|Sphingomonadales	204457|Sphingomonadales	S	Histidine-specific methyltransferase, SAM-dependent	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_33
SRD3_k127_3167291_2	1549858.MC45_13980	6.848e-147	469.0	COG1250@1|root,COG1250@2|Bacteria,1MU9P@1224|Proteobacteria,2TR8E@28211|Alphaproteobacteria,2K0X2@204457|Sphingomonadales	204457|Sphingomonadales	I	Dehydrogenase	paaH	-	1.1.1.157	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	-	R01976,R05576,R06941	RC00029,RC00117	ko00000,ko00001,ko01000	-	-	-	3HCDH,3HCDH_N
SRD3_k127_3167291_6	215803.DB30_2527	1.794e-23	113.0	COG1835@1|root,COG1835@2|Bacteria,1N70C@1224|Proteobacteria,42UE2@68525|delta/epsilon subdivisions,2WXM7@28221|Deltaproteobacteria,2YZPX@29|Myxococcales	28221|Deltaproteobacteria	I	Acyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
SRD3_k127_3167291_5	1112214.AHIS01000051_gene2451	9.064e-31	121.0	COG1250@1|root,COG1250@2|Bacteria,1MU9P@1224|Proteobacteria,2TR8E@28211|Alphaproteobacteria,2K0X2@204457|Sphingomonadales	204457|Sphingomonadales	I	Dehydrogenase	paaH	-	1.1.1.157	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	-	R01976,R05576,R06941	RC00029,RC00117	ko00000,ko00001,ko01000	-	-	-	3HCDH,3HCDH_N
SRD3_k127_3167291_4	1239962.C943_04622	3.476e-35	140.0	COG3832@1|root,COG3832@2|Bacteria,4NUD2@976|Bacteroidetes	976|Bacteroidetes	S	Polyketide cyclase / dehydrase and lipid transport	-	-	-	-	-	-	-	-	-	-	-	-	Polyketide_cyc2
SRD3_k127_3167291_3	1112212.JH584235_gene2598	3.082e-101	334.0	COG0431@1|root,COG0431@2|Bacteria,1RB2T@1224|Proteobacteria,2U6RE@28211|Alphaproteobacteria,2K1QH@204457|Sphingomonadales	204457|Sphingomonadales	S	NADPH-dependent FMN reductase	-	-	1.5.1.38	ko:K00299	ko00740,ko00920,ko01100,map00740,map00920,map01100	-	R05706,R07210,R10206	RC00126,RC01779,RC02556	ko00000,ko00001,ko01000	-	-	-	FMN_red
SRD3_k127_3167291_0	1112212.JH584235_gene2597	3.088e-315	978.0	COG0744@1|root,COG0744@2|Bacteria,1QTST@1224|Proteobacteria,2TQQ8@28211|Alphaproteobacteria,2K0XK@204457|Sphingomonadales	204457|Sphingomonadales	M	Penicillin-binding Protein	-	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly,Transpeptidase
SRD3_k127_3177278_0	1112212.JH584235_gene2921	1.108e-295	914.0	COG3243@1|root,COG3243@2|Bacteria,1MU68@1224|Proteobacteria,2TR7S@28211|Alphaproteobacteria,2K0U9@204457|Sphingomonadales	204457|Sphingomonadales	I	poly(R)-hydroxyalkanoic acid synthase	phaC	-	-	ko:K03821	ko00650,map00650	-	R04254	RC00004	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1,PhaC_N
SRD3_k127_3177278_1	1030157.AFMP01000040_gene1608	5.604e-243	753.0	COG0436@1|root,COG0436@2|Bacteria,1MWS8@1224|Proteobacteria,2TRE3@28211|Alphaproteobacteria,2K0GY@204457|Sphingomonadales	204457|Sphingomonadales	E	Aminotransferase	-	-	-	ko:K14261	-	-	-	-	ko00000,ko01000,ko01007	-	-	-	Aminotran_1_2
SRD3_k127_3177278_3	1112212.JH584235_gene2918	5.98e-75	254.0	COG0824@1|root,COG0824@2|Bacteria,1RH20@1224|Proteobacteria,2VF5I@28211|Alphaproteobacteria,2KDVU@204457|Sphingomonadales	204457|Sphingomonadales	S	Thioesterase-like superfamily	-	-	-	ko:K07107	-	-	-	-	ko00000,ko01000	-	-	-	4HBT
SRD3_k127_3177278_2	1112212.JH584235_gene2064	2.573e-83	279.0	COG1733@1|root,COG1733@2|Bacteria,1RIZT@1224|Proteobacteria,2U7SS@28211|Alphaproteobacteria,2K4MD@204457|Sphingomonadales	204457|Sphingomonadales	K	transcriptional	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
SRD3_k127_3177278_4	1112214.AHIS01000046_gene2281	5.581e-29	119.0	2EG1C@1|root,339TC@2|Bacteria,1NGB5@1224|Proteobacteria,2V71Y@28211|Alphaproteobacteria,2K6JY@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_318274_7	1112214.AHIS01000032_gene1089	1.342e-95	314.0	COG0074@1|root,COG0074@2|Bacteria,1MUGA@1224|Proteobacteria,2TQKB@28211|Alphaproteobacteria,2K1F5@204457|Sphingomonadales	204457|Sphingomonadales	C	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit	sucD	-	6.2.1.5	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00173,M00374,M00620	R00405,R02404	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	-	CoA_binding,Ligase_CoA
SRD3_k127_318274_0	1112216.JH594425_gene186	0.0	1788.0	COG0567@1|root,COG0567@2|Bacteria,1MVBF@1224|Proteobacteria,2TRBQ@28211|Alphaproteobacteria,2K1J3@204457|Sphingomonadales	204457|Sphingomonadales	C	E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate	sucA	-	1.2.4.2	ko:K00164	ko00020,ko00310,ko00380,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map00380,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00032	R00621,R01933,R01940,R03316,R08549	RC00004,RC00027,RC00627,RC02743,RC02833,RC02883	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxogl_dehyd_N,E1_dh,OxoGdeHyase_C,Transket_pyr
SRD3_k127_318274_3	194867.ALBQ01000021_gene1956	8.519e-198	623.0	COG0508@1|root,COG0508@2|Bacteria,1MUJD@1224|Proteobacteria,2TS5N@28211|Alphaproteobacteria,2K18R@204457|Sphingomonadales	204457|Sphingomonadales	C	The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2)	sucB	-	2.3.1.61	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00032	R02570,R02571,R08549	RC00004,RC02727,RC02833	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
SRD3_k127_318274_1	685778.AORL01000018_gene21	1.663e-265	821.0	COG1249@1|root,COG1249@2|Bacteria,1MU2U@1224|Proteobacteria,2TRN7@28211|Alphaproteobacteria,2K1EA@204457|Sphingomonadales	204457|Sphingomonadales	C	COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes	-	-	1.8.1.4	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00036,M00307,M00532	R00209,R01221,R01698,R03815,R07618,R08549	RC00004,RC00022,RC00583,RC02742,RC02833,RC02834	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pyr_redox_2,Pyr_redox_dim
SRD3_k127_318274_2	1411123.JQNH01000001_gene2901	3.135e-261	816.0	COG0659@1|root,COG0659@2|Bacteria,1MVWV@1224|Proteobacteria,2TUH6@28211|Alphaproteobacteria	28211|Alphaproteobacteria	P	COG0659 Sulfate permease and related transporters (MFS superfamily	-	-	-	ko:K03321	-	-	-	-	ko00000,ko02000	2.A.53.3	-	-	STAS,Sulfate_transp
SRD3_k127_318274_11	1449076.JOOE01000003_gene3176	1.184e-33	132.0	COG1396@1|root,COG1396@2|Bacteria,1MZQK@1224|Proteobacteria,2UCAK@28211|Alphaproteobacteria,2K7KZ@204457|Sphingomonadales	204457|Sphingomonadales	K	XRE family transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_3
SRD3_k127_318274_10	1112214.AHIS01000064_gene2687	1.105e-52	201.0	COG3619@1|root,COG3619@2|Bacteria,1NBT2@1224|Proteobacteria,2VF7C@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1275)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1275
SRD3_k127_318274_6	1112212.JH584235_gene3137	1.015e-97	323.0	COG2860@1|root,COG2860@2|Bacteria,1RHQN@1224|Proteobacteria,2U6ZM@28211|Alphaproteobacteria,2K16N@204457|Sphingomonadales	204457|Sphingomonadales	S	UPF0126 domain	-	-	-	-	-	-	-	-	-	-	-	-	UPF0126
SRD3_k127_318274_8	1380394.JADL01000002_gene1525	1.502e-65	227.0	COG3791@1|root,COG3791@2|Bacteria,1RFBP@1224|Proteobacteria,2U7YA@28211|Alphaproteobacteria,2JUEE@204441|Rhodospirillales	204441|Rhodospirillales	S	Glutathione-dependent formaldehyde-activating enzyme	-	-	-	-	-	-	-	-	-	-	-	-	GFA
SRD3_k127_318274_4	1112214.AHIS01000064_gene2693	3.752e-188	603.0	29Y21@1|root,30JUY@2|Bacteria,1PGN0@1224|Proteobacteria,2V8WB@28211|Alphaproteobacteria,2K80V@204457|Sphingomonadales	204457|Sphingomonadales	S	Common central domain of tyrosinase	-	-	-	-	-	-	-	-	-	-	-	-	Tyrosinase
SRD3_k127_318274_9	158500.BV97_02038	9.881e-55	211.0	COG1520@1|root,COG1520@2|Bacteria,1Q88G@1224|Proteobacteria,2UTBS@28211|Alphaproteobacteria,2K7PY@204457|Sphingomonadales	204457|Sphingomonadales	S	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	-	-	-	-	-	-	-	-	-	-	-	-	PQQ_2
SRD3_k127_318274_5	1112212.JH584235_gene3141	5.051e-139	456.0	COG0178@1|root,COG0178@2|Bacteria,1MW0W@1224|Proteobacteria,2TQK9@28211|Alphaproteobacteria,2K0VM@204457|Sphingomonadales	204457|Sphingomonadales	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate	uvrA	-	-	ko:K03701	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	ABC_tran
SRD3_k127_3211231_8	1207055.C100_00850	9.321e-115	389.0	COG2755@1|root,COG2755@2|Bacteria,1MXBN@1224|Proteobacteria,2U079@28211|Alphaproteobacteria,2K44C@204457|Sphingomonadales	204457|Sphingomonadales	E	GDSL-like Lipase/Acylhydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
SRD3_k127_3211231_36	1040989.AWZU01000017_gene3253	1.824e-07	58.0	COG4219@1|root,COG4219@2|Bacteria,1R8I7@1224|Proteobacteria,2U1KK@28211|Alphaproteobacteria,3JS1Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KT	BlaR1 peptidase M56	-	-	-	-	-	-	-	-	-	-	-	-	DUF3471,Peptidase_M56
SRD3_k127_3211231_7	1331060.RLDS_06905	5.815e-115	376.0	COG0607@1|root,COG4275@1|root,COG0607@2|Bacteria,COG4275@2|Bacteria,1MYDE@1224|Proteobacteria,2TRC3@28211|Alphaproteobacteria,2K31D@204457|Sphingomonadales	204457|Sphingomonadales	P	Chromate resistance exported protein	-	-	-	-	-	-	-	-	-	-	-	-	Chrome_Resist
SRD3_k127_3211231_2	1449076.JOOE01000001_gene1792	7.123e-228	714.0	COG2059@1|root,COG2059@2|Bacteria,1MUBW@1224|Proteobacteria,2TRXF@28211|Alphaproteobacteria,2K06B@204457|Sphingomonadales	204457|Sphingomonadales	P	chromate transporter	-	-	-	ko:K07240	-	-	-	-	ko00000,ko02000	2.A.51.1	-	-	Chromate_transp
SRD3_k127_3211231_15	1449076.JOOE01000002_gene1403	1.031e-59	220.0	COG1393@1|root,COG1393@2|Bacteria,1MZ4Z@1224|Proteobacteria,2U70U@28211|Alphaproteobacteria,2KADX@204457|Sphingomonadales	204457|Sphingomonadales	P	ArsC family	-	-	-	-	-	-	-	-	-	-	-	-	ArsC
SRD3_k127_3211231_9	1449076.JOOE01000002_gene1404	6.866e-93	309.0	COG0580@1|root,COG0580@2|Bacteria,1PPTN@1224|Proteobacteria,2TW8M@28211|Alphaproteobacteria,2K97J@204457|Sphingomonadales	204457|Sphingomonadales	G	Major intrinsic protein	-	-	-	-	-	-	-	-	-	-	-	-	MIP
SRD3_k127_3211231_17	1449076.JOOE01000002_gene1405	3.725e-47	171.0	COG0640@1|root,COG0640@2|Bacteria,1MZAU@1224|Proteobacteria,2U9NV@28211|Alphaproteobacteria,2K5RP@204457|Sphingomonadales	204457|Sphingomonadales	K	Helix-turn-helix domain	-	-	-	ko:K03892	-	-	-	-	ko00000,ko03000	-	-	-	HTH_20
SRD3_k127_3211231_12	1449076.JOOE01000002_gene1406	2.879e-69	238.0	COG0346@1|root,COG0346@2|Bacteria,1RHIV@1224|Proteobacteria,2TR4K@28211|Alphaproteobacteria,2K47U@204457|Sphingomonadales	204457|Sphingomonadales	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
SRD3_k127_3211231_30	1219049.SP5_038_00180	6.419e-15	78.0	2EJ1T@1|root,316YU@2|Bacteria,1NGV9@1224|Proteobacteria,2V0KU@28211|Alphaproteobacteria,2K78S@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3211231_16	1502851.FG93_03402	1.112e-57	202.0	COG0346@1|root,COG0346@2|Bacteria,1N15G@1224|Proteobacteria,2UCYE@28211|Alphaproteobacteria	28211|Alphaproteobacteria	E	Lactoylglutathione lyase and related lyases	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
SRD3_k127_3211231_18	1267535.KB906767_gene3827	2.562e-46	175.0	COG3832@1|root,COG3832@2|Bacteria,3Y5GP@57723|Acidobacteria	2|Bacteria	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
SRD3_k127_3211231_14	1030157.AFMP01000019_gene586	2.951e-60	214.0	COG0789@1|root,COG0789@2|Bacteria,1RGX6@1224|Proteobacteria,2U98F@28211|Alphaproteobacteria,2K4QY@204457|Sphingomonadales	204457|Sphingomonadales	K	MerR family transcriptional regulator	-	-	-	ko:K19591	-	M00769	-	-	ko00000,ko00002,ko01504,ko03000	-	-	-	MerR,MerR-DNA-bind
SRD3_k127_3211231_1	1112216.JH594425_gene2693	0.0	1055.0	COG2217@1|root,COG2217@2|Bacteria,1MU08@1224|Proteobacteria,2TR80@28211|Alphaproteobacteria,2K0EB@204457|Sphingomonadales	204457|Sphingomonadales	P	P-type ATPase	-	-	3.6.3.54	ko:K17686	ko01524,ko04016,map01524,map04016	-	R00086	RC00002	ko00000,ko00001,ko01000	3.A.3.5	-	-	E1-E2_ATPase,HMA,Hydrolase,YHS
SRD3_k127_3211231_10	1280947.HY30_04305	9.43e-80	278.0	COG5553@1|root,COG5553@2|Bacteria,1PNX4@1224|Proteobacteria,2UZQZ@28211|Alphaproteobacteria,43ZRM@69657|Hyphomonadaceae	28211|Alphaproteobacteria	S	Cysteine dioxygenase type I	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3211231_29	517722.AEUE01000001_gene2619	1.372e-16	89.0	2AMGK@1|root,31CC6@2|Bacteria,1Q8DF@1224|Proteobacteria,2VEK0@28211|Alphaproteobacteria,2K81E@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3211231_6	194867.ALBQ01000014_gene431	2.729e-127	412.0	COG3662@1|root,COG3662@2|Bacteria,1R50Q@1224|Proteobacteria,2TSG5@28211|Alphaproteobacteria,2K0BR@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	DUF2236
SRD3_k127_3211231_39	1120956.JHZK01000015_gene2988	0.0003307	53.0	2EGPX@1|root,33AG3@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3211231_0	1090320.KB900605_gene1649	0.0	1358.0	COG4772@1|root,COG4772@2|Bacteria,1NTC4@1224|Proteobacteria,2U2WU@28211|Alphaproteobacteria,2KEQ4@204457|Sphingomonadales	204457|Sphingomonadales	P	TonB-dependent Receptor Plug Domain	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SRD3_k127_3211231_11	1122612.AUBA01000002_gene1742	1.718e-75	263.0	2B47E@1|root,31WYM@2|Bacteria,1R5Q0@1224|Proteobacteria,2U37C@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3211231_27	1236501.BAJU01000001_gene200	6.114e-23	105.0	COG1434@1|root,COG1434@2|Bacteria,1R483@1224|Proteobacteria,2VEQJ@28211|Alphaproteobacteria,2JYJS@204441|Rhodospirillales	204441|Rhodospirillales	S	DUF218 domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF218
SRD3_k127_3211231_3	1123269.NX02_03850	6.916e-195	623.0	28HPK@1|root,2Z7XJ@2|Bacteria,1NBHR@1224|Proteobacteria,2TT3N@28211|Alphaproteobacteria,2K7A3@204457|Sphingomonadales	204457|Sphingomonadales	S	Bacteriophage head to tail connecting protein	-	-	-	-	-	-	-	-	-	-	-	-	Head-tail_con
SRD3_k127_3211231_19	1123269.NX02_04060	3.417e-40	157.0	2AXQF@1|root,31PR8@2|Bacteria,1RKX8@1224|Proteobacteria,2UJCZ@28211|Alphaproteobacteria,2KAYN@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3211231_5	1123269.NX02_04065	2.419e-148	477.0	28HXV@1|root,2Z83C@2|Bacteria,1PJBP@1224|Proteobacteria,2U8DN@28211|Alphaproteobacteria,2K5CZ@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3211231_21	1219049.SP5_068_01190	4.552e-37	147.0	2ED07@1|root,336X6@2|Bacteria,1N6RV@1224|Proteobacteria,2UHR8@28211|Alphaproteobacteria,2K6QR@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3211231_26	1122963.AUHB01000024_gene134	2.268e-27	119.0	2DU1C@1|root,33NHU@2|Bacteria,1P4A2@1224|Proteobacteria,2UYR5@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3211231_22	1123269.NX02_04080	9.176e-37	147.0	2DZ82@1|root,32V6V@2|Bacteria,1N3UK@1224|Proteobacteria,2UDCT@28211|Alphaproteobacteria,2KAXQ@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3211231_13	1123269.NX02_04085	8.081e-67	243.0	28I8X@1|root,2ZY8S@2|Bacteria,1PKQ7@1224|Proteobacteria,2UZC6@28211|Alphaproteobacteria,2K8JX@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3211231_4	1123269.NX02_04090	1.417e-191	618.0	28I8X@1|root,2Z8BQ@2|Bacteria,1MW9X@1224|Proteobacteria,2TVGJ@28211|Alphaproteobacteria,2K7ED@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3211231_23	1123269.NX02_04095	1.464e-36	143.0	29END@1|root,301KB@2|Bacteria,1Q6WA@1224|Proteobacteria,2VCZH@28211|Alphaproteobacteria,2KB0Y@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3211231_25	1123269.NX02_04145	7.892e-33	135.0	2AHDT@1|root,317QV@2|Bacteria,1PZ3D@1224|Proteobacteria,2VD23@28211|Alphaproteobacteria,2KB2R@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3211231_31	999541.bgla_1g19170	6.195e-13	81.0	COG0739@1|root,COG0739@2|Bacteria,1MVTF@1224|Proteobacteria,2VHBS@28216|Betaproteobacteria,1K1JH@119060|Burkholderiaceae	28216|Betaproteobacteria	M	peptidase	-	-	-	-	-	-	-	-	-	-	-	-	OapA,Peptidase_M23
SRD3_k127_3211231_24	194867.ALBQ01000013_gene841	3.639e-33	149.0	COG1388@1|root,COG1388@2|Bacteria,1PEC9@1224|Proteobacteria,2URJJ@28211|Alphaproteobacteria,2K7Z3@204457|Sphingomonadales	204457|Sphingomonadales	M	Lysin motif	-	-	-	-	-	-	-	-	-	-	-	-	LysM
SRD3_k127_3211231_28	205922.Pfl01_4047	1.168e-19	98.0	COG4627@1|root,COG4627@2|Bacteria,1NKXY@1224|Proteobacteria	1224|Proteobacteria	S	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_23
SRD3_k127_3211231_37	469610.HMPREF0189_01118	6.506e-05	57.0	29XHZ@1|root,30J8S@2|Bacteria,1R0GN@1224|Proteobacteria,2W2R9@28216|Betaproteobacteria	28216|Betaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3211231_20	1504672.669782897	1.817e-39	153.0	COG3772@1|root,COG3772@2|Bacteria,1MZJD@1224|Proteobacteria,2VTZX@28216|Betaproteobacteria,4AHSN@80864|Comamonadaceae	28216|Betaproteobacteria	G	Phage lysozyme	-	-	3.2.1.17	ko:K01185	-	-	-	-	ko00000,ko01000	-	-	-	Phage_lysozyme
SRD3_k127_3218955_9	1112216.JH594425_gene1929	3.156e-09	57.0	COG3218@1|root,COG3218@2|Bacteria,1RKTW@1224|Proteobacteria,2UAXY@28211|Alphaproteobacteria,2K5KR@204457|Sphingomonadales	204457|Sphingomonadales	S	transport system auxiliary component	linN	-	-	ko:K18480	-	M00669	-	-	ko00000,ko00002,ko02000	3.A.1.27.1	-	-	ABC_trans_aux
SRD3_k127_3218955_5	1550073.JROH01000008_gene1797	2.831e-113	372.0	COG0652@1|root,COG0652@2|Bacteria,1QCY4@1224|Proteobacteria,2U56N@28211|Alphaproteobacteria,2K25P@204457|Sphingomonadales	204457|Sphingomonadales	O	peptidyl-prolyl cis-trans isomerase	-	-	5.2.1.8	ko:K01802	-	-	-	-	ko00000,ko01000	-	-	-	Pro_isomerase
SRD3_k127_3218955_8	158500.BV97_02459	5.062e-13	70.0	COG1961@1|root,COG1961@2|Bacteria,1MWCZ@1224|Proteobacteria,2TRIY@28211|Alphaproteobacteria,2K2HE@204457|Sphingomonadales	204457|Sphingomonadales	L	COG1961 Site-specific recombinases, DNA invertase Pin homologs	-	-	-	-	-	-	-	-	-	-	-	-	Recombinase,Resolvase,Zn_ribbon_recom
SRD3_k127_3218955_2	1335760.ASTG01000019_gene2717	1.54e-173	548.0	COG0583@1|root,COG0583@2|Bacteria,1PMTG@1224|Proteobacteria,2TV35@28211|Alphaproteobacteria,2K0PI@204457|Sphingomonadales	204457|Sphingomonadales	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SRD3_k127_3218955_3	1346791.M529_16590	1.047e-149	480.0	COG3000@1|root,COG3000@2|Bacteria,1R646@1224|Proteobacteria,2U1PJ@28211|Alphaproteobacteria,2K0N0@204457|Sphingomonadales	204457|Sphingomonadales	I	Fatty acid hydroxylase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
SRD3_k127_3218955_0	1346791.M529_16595	1.27e-263	819.0	COG0457@1|root,COG0457@2|Bacteria,1MVMG@1224|Proteobacteria,2TSGE@28211|Alphaproteobacteria,2K04M@204457|Sphingomonadales	204457|Sphingomonadales	S	Sulfotransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Sulfotransfer_3,TPR_16,TPR_19
SRD3_k127_3218955_7	1335760.ASTG01000019_gene2714	2.297e-30	124.0	2BQSZ@1|root,31B7B@2|Bacteria,1NYHY@1224|Proteobacteria,2UTYX@28211|Alphaproteobacteria,2KDQA@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3218955_6	1335760.ASTG01000019_gene2713	4.15e-34	135.0	29BJY@1|root,31AZG@2|Bacteria,1NXY2@1224|Proteobacteria,2UTNG@28211|Alphaproteobacteria,2KC9Z@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3218955_4	1346791.M529_16610	1.039e-143	462.0	COG3391@1|root,COG3391@2|Bacteria,1R53R@1224|Proteobacteria,2U1FC@28211|Alphaproteobacteria,2K0VC@204457|Sphingomonadales	204457|Sphingomonadales	S	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3218955_1	1346791.M529_16615	2.715e-197	618.0	COG0154@1|root,COG0154@2|Bacteria,1MUVQ@1224|Proteobacteria,2TR00@28211|Alphaproteobacteria,2K2BN@204457|Sphingomonadales	204457|Sphingomonadales	J	Amidase	-	-	3.5.1.54	ko:K01457	ko00220,ko00791,ko01100,ko01120,map00220,map00791,map01100,map01120	-	R00005	RC02756	ko00000,ko00001,ko01000	-	-	-	Amidase
SRD3_k127_3304923_0	1112212.JH584235_gene419	9.437e-251	776.0	COG1024@1|root,COG1250@1|root,COG1024@2|Bacteria,COG1250@2|Bacteria,1MU9P@1224|Proteobacteria,2TS8E@28211|Alphaproteobacteria,2K0RP@204457|Sphingomonadales	204457|Sphingomonadales	I	Belongs to the enoyl-CoA hydratase isomerase family	-	-	1.1.1.35	ko:K07516	ko00071,ko00362,ko00650,ko01100,ko01120,ko01200,ko01212,map00071,map00362,map00650,map01100,map01120,map01200,map01212	M00087	R01975,R04737,R04739,R04741,R04743,R04745,R04748,R05305	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000	-	-	-	3HCDH,3HCDH_N,ECH_1
SRD3_k127_3304923_1	1112214.AHIS01000101_gene1667	4.291e-178	567.0	COG0154@1|root,COG0154@2|Bacteria,1MW3Z@1224|Proteobacteria,2TS56@28211|Alphaproteobacteria,2K2ST@204457|Sphingomonadales	204457|Sphingomonadales	J	COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases	-	-	3.5.1.4	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	-	R02540,R03096,R03180,R03909,R05551,R05590	RC00010,RC00100,RC00950,RC01025	ko00000,ko00001,ko01000	-	-	-	Amidase
SRD3_k127_3304923_2	629773.AORY01000011_gene1878	2.922e-55	196.0	COG1960@1|root,COG1960@2|Bacteria,1MVJC@1224|Proteobacteria,2TUVB@28211|Alphaproteobacteria,2K0FU@204457|Sphingomonadales	204457|Sphingomonadales	I	Acyl-CoA dehydrogenase, middle domain	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SRD3_k127_3321531_22	46429.BV95_04463	2.91e-07	52.0	COG4181@1|root,COG4181@2|Bacteria,1MXG9@1224|Proteobacteria,2TS0J@28211|Alphaproteobacteria,2JZZV@204457|Sphingomonadales	204457|Sphingomonadales	Q	ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component	-	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
SRD3_k127_3321531_0	1550073.JROH01000005_gene1579	0.0	1108.0	COG3127@1|root,COG3127@2|Bacteria,1MU9R@1224|Proteobacteria,2TS8V@28211|Alphaproteobacteria,2K03T@204457|Sphingomonadales	204457|Sphingomonadales	Q	ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
SRD3_k127_3321531_4	1090319.KE386571_gene687	1.895e-185	592.0	COG2272@1|root,COG2272@2|Bacteria,1MVQZ@1224|Proteobacteria,2TUA9@28211|Alphaproteobacteria,2K1A5@204457|Sphingomonadales	204457|Sphingomonadales	I	Belongs to the type-B carboxylesterase lipase family	-	-	-	ko:K03929	-	-	-	-	ko00000,ko01000	-	CE10	-	COesterase
SRD3_k127_3321531_5	1112214.AHIS01000077_gene3822	1.372e-146	472.0	2E55N@1|root,32ZYI@2|Bacteria,1NFET@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3321531_20	930171.Asphe3_30140	9.942e-17	94.0	COG3591@1|root,COG5549@1|root,COG3591@2|Bacteria,COG5549@2|Bacteria,2ICW7@201174|Actinobacteria	201174|Actinobacteria	E	Belongs to the peptidase S1B family	-	-	-	-	-	-	-	-	-	-	-	-	DUF346
SRD3_k127_3321531_18	1116232.AHBF01000137_gene1918	1.043e-26	127.0	2DYX8@1|root,34BJ0@2|Bacteria,2GUI2@201174|Actinobacteria	201174|Actinobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3321531_10	378806.STAUR_3495	1.842e-98	357.0	COG3511@1|root,COG3511@2|Bacteria,1MWVP@1224|Proteobacteria,43347@68525|delta/epsilon subdivisions,2X3ZJ@28221|Deltaproteobacteria,2YXPX@29|Myxococcales	28221|Deltaproteobacteria	M	Phosphoesterase family	-	-	3.1.4.3	ko:K01114	ko00562,ko00564,ko00565,ko01100,ko01110,ko02024,ko04919,map00562,map00564,map00565,map01100,map01110,map02024,map04919	-	R01312,R02027,R02052,R03332,R07381	RC00017,RC00425	ko00000,ko00001,ko01000,ko02042	-	-	-	Phosphoesterase
SRD3_k127_3321531_7	292415.Tbd_1355	1.006e-121	427.0	COG2931@1|root,COG2931@2|Bacteria	2|Bacteria	Q	calcium- and calmodulin-responsive adenylate cyclase activity	-	-	-	-	-	-	-	-	-	-	-	-	Beta_helix,VCBS
SRD3_k127_3321531_2	69395.JQLZ01000003_gene93	2.667e-205	647.0	COG2723@1|root,COG2723@2|Bacteria,1MWG6@1224|Proteobacteria,2TSRN@28211|Alphaproteobacteria,2KHEA@204458|Caulobacterales	204458|Caulobacterales	G	Belongs to the glycosyl hydrolase 1 family	-	-	3.2.1.21	ko:K05350	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	-	-	Glyco_hydro_1
SRD3_k127_3321531_16	983920.Y88_3627	2.83e-40	153.0	2DRS8@1|root,33CUB@2|Bacteria,1QV1W@1224|Proteobacteria,2UJDK@28211|Alphaproteobacteria,2KERH@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3321531_13	1112216.JH594425_gene1770	3.628e-65	231.0	COG3945@1|root,COG3945@2|Bacteria,1RD5H@1224|Proteobacteria,2U8JH@28211|Alphaproteobacteria,2K4BE@204457|Sphingomonadales	204457|Sphingomonadales	S	Hemerythrin HHE cation binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Hemerythrin
SRD3_k127_3321531_3	944435.AXAJ01000007_gene1595	4.484e-190	607.0	COG0477@1|root,COG0477@2|Bacteria,1MXZ3@1224|Proteobacteria,2VH3E@28216|Betaproteobacteria,1K2TP@119060|Burkholderiaceae	28216|Betaproteobacteria	EGP	Major facilitator superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_3
SRD3_k127_3321531_14	316056.RPC_4713	6.63e-56	200.0	COG1846@1|root,COG1846@2|Bacteria,1RI74@1224|Proteobacteria,2UAPB@28211|Alphaproteobacteria,3JZYN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SRD3_k127_3321531_21	1144312.PMI09_03723	8.847e-09	63.0	COG3832@1|root,COG3832@2|Bacteria,1RJKI@1224|Proteobacteria,2UAQG@28211|Alphaproteobacteria,4BCHX@82115|Rhizobiaceae	28211|Alphaproteobacteria	K	Activator of Hsp90 ATPase	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
SRD3_k127_3321531_9	1112214.AHIS01000065_gene2674	9.196e-119	394.0	COG2267@1|root,COG2267@2|Bacteria,1QDFI@1224|Proteobacteria,2U244@28211|Alphaproteobacteria,2K3CZ@204457|Sphingomonadales	204457|Sphingomonadales	I	Protein of unknown function (DUF3089)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3089
SRD3_k127_3321531_1	685778.AORL01000021_gene266	1.395e-205	672.0	COG4206@1|root,COG4206@2|Bacteria,1R47X@1224|Proteobacteria,2TW4W@28211|Alphaproteobacteria,2JZYG@204457|Sphingomonadales	204457|Sphingomonadales	H	receptor	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SRD3_k127_3321531_8	1090320.KB900605_gene1646	7.242e-119	391.0	COG0657@1|root,COG0657@2|Bacteria,1N5QB@1224|Proteobacteria,2U1WU@28211|Alphaproteobacteria,2K1HS@204457|Sphingomonadales	204457|Sphingomonadales	I	alpha/beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3,Peptidase_S9
SRD3_k127_3321531_11	1114964.L485_00275	2.759e-97	327.0	COG0561@1|root,COG0561@2|Bacteria,1R9NT@1224|Proteobacteria,2U4HA@28211|Alphaproteobacteria,2K8H0@204457|Sphingomonadales	204457|Sphingomonadales	S	Eukaryotic phosphomannomutase	-	-	-	-	-	-	-	-	-	-	-	-	PMM
SRD3_k127_3321531_19	1197477.IA57_07775	2.904e-20	106.0	COG1073@1|root,COG1073@2|Bacteria,4PMNT@976|Bacteroidetes,1HZRQ@117743|Flavobacteriia	976|Bacteroidetes	N	alpha beta	-	-	-	-	-	-	-	-	-	-	-	-	DUF676,PGAP1
SRD3_k127_3321531_15	1007104.SUS17_1242	1.434e-53	197.0	COG5662@1|root,COG5662@2|Bacteria,1RK96@1224|Proteobacteria,2U9MN@28211|Alphaproteobacteria,2K553@204457|Sphingomonadales	204457|Sphingomonadales	K	AntiSigma factor	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3321531_12	1219049.SP5_004_00080	9.738e-70	239.0	COG1595@1|root,COG1595@2|Bacteria,1MZMC@1224|Proteobacteria,2U9FD@28211|Alphaproteobacteria,2K4SI@204457|Sphingomonadales	204457|Sphingomonadales	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
SRD3_k127_3321531_6	194867.ALBQ01000013_gene793	2.972e-123	407.0	COG1404@1|root,COG1404@2|Bacteria,1MU3S@1224|Proteobacteria,2TT0E@28211|Alphaproteobacteria,2K188@204457|Sphingomonadales	204457|Sphingomonadales	O	Subtilase family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
SRD3_k127_3321531_23	194867.ALBQ01000013_gene792	4.527e-06	53.0	28W2F@1|root,2ZI3D@2|Bacteria,1MYFI@1224|Proteobacteria,2UAR9@28211|Alphaproteobacteria,2K535@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3323689_0	1081640.AGFU01000051_gene867	1.136e-168	539.0	COG0306@1|root,COG0306@2|Bacteria,1MVXK@1224|Proteobacteria,2TSYI@28211|Alphaproteobacteria,2JZVM@204457|Sphingomonadales	204457|Sphingomonadales	P	phosphate transporter	-	-	-	ko:K03306	-	-	-	-	ko00000	2.A.20	-	-	PHO4
SRD3_k127_3323689_1	317655.Sala_0716	3.734e-83	281.0	COG1392@1|root,COG1392@2|Bacteria,1R4SP@1224|Proteobacteria,2U5E0@28211|Alphaproteobacteria,2KD7U@204457|Sphingomonadales	204457|Sphingomonadales	P	Protein of unknown function DUF47	-	-	-	ko:K07220	-	-	-	-	ko00000	-	-	-	NUDIX,PhoU_div
SRD3_k127_3323689_2	1007104.SUS17_1087	9.65e-26	109.0	COG3238@1|root,COG3238@2|Bacteria,1N6ZC@1224|Proteobacteria,2UFXH@28211|Alphaproteobacteria,2K52V@204457|Sphingomonadales	204457|Sphingomonadales	S	Putative inner membrane exporter, YdcZ	-	-	-	-	-	-	-	-	-	-	-	-	DMT_YdcZ
SRD3_k127_3335260_3	1123269.NX02_19945	3.991e-130	428.0	COG1157@1|root,COG1157@2|Bacteria,1MUH6@1224|Proteobacteria,2TRXU@28211|Alphaproteobacteria,2JZWF@204457|Sphingomonadales	204457|Sphingomonadales	NU	Flagellar biosynthesis type III secretory pathway ATPase	-	-	3.6.3.14	ko:K02412	ko02040,map02040	-	-	-	ko00000,ko00001,ko01000,ko02035,ko02044	3.A.6.2,3.A.6.3	-	-	ATP-synt_ab
SRD3_k127_3335260_5	1090319.KE386571_gene3215	3.318e-87	303.0	COG1766@1|root,COG1766@2|Bacteria,1MUQR@1224|Proteobacteria,2TR6J@28211|Alphaproteobacteria,2K025@204457|Sphingomonadales	204457|Sphingomonadales	N	The M ring may be actively involved in energy transduction	-	-	-	ko:K02409	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2,3.A.6.3	-	-	YscJ_FliF,YscJ_FliF_C
SRD3_k127_3335260_11	1090319.KE386571_gene3214	1.561e-26	112.0	COG1677@1|root,COG1677@2|Bacteria,1Q3T0@1224|Proteobacteria,2UKMF@28211|Alphaproteobacteria	28211|Alphaproteobacteria	NU	Flagellar hook-basal body complex protein FliE	-	-	-	ko:K02408	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FliE
SRD3_k127_3335260_9	1090319.KE386571_gene3213	7.06e-40	158.0	COG1558@1|root,COG1558@2|Bacteria,1Q7R7@1224|Proteobacteria,2UUB3@28211|Alphaproteobacteria,2KD7W@204457|Sphingomonadales	204457|Sphingomonadales	N	Flagellar basal body rod FlgEFG protein C-terminal	-	-	-	ko:K02388	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flg_bbr_C
SRD3_k127_3335260_12	1123269.NX02_19975	1.835e-25	111.0	COG1815@1|root,COG1815@2|Bacteria,1P8MK@1224|Proteobacteria,2UZ4A@28211|Alphaproteobacteria,2KBZK@204457|Sphingomonadales	204457|Sphingomonadales	N	Flagella basal body rod protein	-	-	-	ko:K02387	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flg_bb_rod
SRD3_k127_3335260_1	1090319.KE386571_gene3211	1.36e-150	485.0	COG1706@1|root,COG1706@2|Bacteria,1MVKW@1224|Proteobacteria,2TQNX@28211|Alphaproteobacteria,2K00I@204457|Sphingomonadales	204457|Sphingomonadales	N	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation	-	-	-	ko:K02394	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FlgI
SRD3_k127_3335260_7	1090319.KE386571_gene3210	1.292e-57	207.0	COG2063@1|root,COG2063@2|Bacteria,1RDEY@1224|Proteobacteria,2TRHN@28211|Alphaproteobacteria,2K26G@204457|Sphingomonadales	204457|Sphingomonadales	N	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation	flgH	-	-	ko:K02393	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FlgH
SRD3_k127_3335260_4	1081640.AGFU01000057_gene126	8.042e-91	306.0	COG4786@1|root,COG4786@2|Bacteria,1RDHJ@1224|Proteobacteria,2U8U6@28211|Alphaproteobacteria,2K416@204457|Sphingomonadales	204457|Sphingomonadales	N	Flagellar basal body rod FlgEFG protein C-terminal	-	-	-	ko:K02392	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flg_bb_rod,Flg_bbr_C
SRD3_k127_3335260_6	1090319.KE386571_gene3207	1.436e-60	217.0	COG4786@1|root,COG4786@2|Bacteria,1N4D4@1224|Proteobacteria,2UDSS@28211|Alphaproteobacteria,2K71X@204457|Sphingomonadales	204457|Sphingomonadales	N	Flagellar basal body rod FlgEFG protein C-terminal	-	-	-	ko:K02392	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flg_bbr_C
SRD3_k127_3335260_2	455436.DS989810_gene542	6.539e-144	478.0	COG1032@1|root,COG1032@2|Bacteria,1Q5NG@1224|Proteobacteria,1RQCS@1236|Gammaproteobacteria,46997@72275|Alteromonadaceae	1236|Gammaproteobacteria	C	Elongator protein 3, MiaB family, Radical SAM	-	-	-	-	-	-	-	-	-	-	-	-	B12-binding,DUF4080,Radical_SAM
SRD3_k127_3335260_13	1123269.NX02_17380	1.184e-23	102.0	COG1943@1|root,COG1943@2|Bacteria	2|Bacteria	L	Transposase	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3335260_10	717606.PaecuDRAFT_4175	7.331e-29	121.0	COG2268@1|root,COG3209@1|root,COG2268@2|Bacteria,COG3209@2|Bacteria,1TR8F@1239|Firmicutes,4HBZE@91061|Bacilli,26RI4@186822|Paenibacillaceae	91061|Bacilli	M	COG3209 Rhs family protein	-	-	-	-	-	-	-	-	-	-	-	-	PT-HINT,RHS_repeat
SRD3_k127_3335260_0	1458357.BG58_41110	2.684e-227	782.0	COG1652@1|root,COG3209@1|root,COG1652@2|Bacteria,COG3209@2|Bacteria,1NYE5@1224|Proteobacteria,2W9ZB@28216|Betaproteobacteria,1KBFI@119060|Burkholderiaceae	28216|Betaproteobacteria	M	LysM domain	-	-	-	-	-	-	-	-	-	-	-	-	LysM
SRD3_k127_3400550_3	1112212.JH584235_gene1972	3.886e-22	96.0	COG0438@1|root,COG0438@2|Bacteria,1R8IQ@1224|Proteobacteria,2U842@28211|Alphaproteobacteria,2K1KJ@204457|Sphingomonadales	204457|Sphingomonadales	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
SRD3_k127_3400550_4	1379701.JPJC01000004_gene351	3.864e-05	50.0	COG0009@1|root,COG0009@2|Bacteria,1MVPM@1224|Proteobacteria,2TRIM@28211|Alphaproteobacteria,2K1JS@204457|Sphingomonadales	204457|Sphingomonadales	J	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine	-	-	2.7.7.87	ko:K07566	-	-	R10463	RC00745	ko00000,ko01000,ko03009,ko03016	-	-	-	SUA5,Sua5_yciO_yrdC
SRD3_k127_3400550_1	1112212.JH584235_gene1973	1.134e-85	296.0	COG0625@1|root,COG0625@2|Bacteria,1RA4Y@1224|Proteobacteria,2U5B6@28211|Alphaproteobacteria,2K49D@204457|Sphingomonadales	204457|Sphingomonadales	O	maleylacetoacetate isomerase	-	-	5.2.1.2,5.2.1.4	ko:K01800,ko:K01801	ko00350,ko00643,ko01100,ko01120,map00350,map00643,map01100,map01120	M00044	R03181,R03868	RC00867	ko00000,ko00001,ko00002,ko01000	-	-	-	GST_C_2,GST_N,GST_N_3
SRD3_k127_3400550_0	1112212.JH584235_gene1974	5.514e-149	478.0	COG0628@1|root,COG0628@2|Bacteria,1MW0B@1224|Proteobacteria,2TQSH@28211|Alphaproteobacteria,2K0XW@204457|Sphingomonadales	204457|Sphingomonadales	S	permease	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
SRD3_k127_3400550_2	1112212.JH584235_gene1975	1.447e-63	220.0	COG0681@1|root,COG0681@2|Bacteria,1MXUF@1224|Proteobacteria,2TR9N@28211|Alphaproteobacteria,2K1V9@204457|Sphingomonadales	204457|Sphingomonadales	U	Belongs to the peptidase S26 family	-	-	3.4.21.89	ko:K03100	ko02024,ko03060,map02024,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S24
SRD3_k127_3417088_0	1112212.JH584235_gene2831	7.038e-180	565.0	COG3605@1|root,COG3605@2|Bacteria,1QTTV@1224|Proteobacteria,2TR3Z@28211|Alphaproteobacteria,2K17Q@204457|Sphingomonadales	204457|Sphingomonadales	T	Belongs to the PEP-utilizing enzyme family	ptsP	-	2.7.3.9	ko:K08484	ko02060,map02060	-	-	-	ko00000,ko00001,ko01000,ko02000	-	-	-	GAF_2,PEP-utilisers_N,PEP-utilizers,PEP-utilizers_C
SRD3_k127_3417088_3	1112216.JH594425_gene491	2.526e-91	310.0	COG1426@1|root,COG1426@2|Bacteria,1MYWX@1224|Proteobacteria,2U8C2@28211|Alphaproteobacteria,2K4QD@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF4115)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4115,HTH_25
SRD3_k127_3417088_4	1090320.KB900605_gene1121	3.584e-86	301.0	COG1729@1|root,COG1729@2|Bacteria,1R8C4@1224|Proteobacteria,2VBNQ@28211|Alphaproteobacteria,2K0FK@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_6,TolA_bind_tri
SRD3_k127_3417088_2	1112212.JH584235_gene2834	3.13e-97	329.0	COG0037@1|root,COG0037@2|Bacteria,1MU85@1224|Proteobacteria,2TRK1@28211|Alphaproteobacteria,2K3YA@204457|Sphingomonadales	204457|Sphingomonadales	D	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine	tilS	-	6.3.4.19	ko:K04075	-	-	R09597	RC02633,RC02634	ko00000,ko01000,ko03016	-	-	-	ATP_bind_3
SRD3_k127_3417088_1	1112212.JH584235_gene2835	4.501e-110	360.0	COG0465@1|root,COG0465@2|Bacteria,1MU6J@1224|Proteobacteria,2TSYQ@28211|Alphaproteobacteria,2K1U5@204457|Sphingomonadales	204457|Sphingomonadales	O	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins	ftsH	-	-	ko:K03798	-	M00742	-	-	ko00000,ko00002,ko01000,ko01002,ko03110	-	-	-	AAA,FtsH_ext,Peptidase_M41
SRD3_k127_3456184_4	1331060.RLDS_17690	2.81e-52	190.0	COG0746@1|root,COG0746@2|Bacteria,1N1GK@1224|Proteobacteria,2UDGM@28211|Alphaproteobacteria,2K5W9@204457|Sphingomonadales	204457|Sphingomonadales	H	Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor	mobA	-	2.7.7.77	ko:K03752	ko00790,ko01100,map00790,map01100	-	R11581	-	ko00000,ko00001,ko01000	-	-	-	NTP_transf_3
SRD3_k127_3456184_2	1550073.JROH01000069_gene2826	2.203e-101	340.0	COG0007@1|root,COG0007@2|Bacteria,1MUI0@1224|Proteobacteria,2TRJC@28211|Alphaproteobacteria,2K111@204457|Sphingomonadales	204457|Sphingomonadales	H	Belongs to the precorrin methyltransferase family	-	-	2.1.1.107	ko:K02303	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R03194	RC00003,RC00871	ko00000,ko00001,ko00002,ko01000	-	-	-	TP_methylase
SRD3_k127_3456184_0	685778.AORL01000019_gene1803	0.0	1457.0	COG0243@1|root,COG0243@2|Bacteria,1NS3T@1224|Proteobacteria,2TQYD@28211|Alphaproteobacteria,2K1FR@204457|Sphingomonadales	204457|Sphingomonadales	C	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family	-	-	-	ko:K00372	ko00910,ko01120,map00910,map01120	M00531	R00798,R01106	RC02812	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2_BFD,Molybdop_Fe4S4,Molybdopterin,Molydop_binding
SRD3_k127_3456184_3	627192.SLG_27710	1.108e-62	216.0	COG2146@1|root,COG2146@2|Bacteria,1N03R@1224|Proteobacteria,2UC33@28211|Alphaproteobacteria,2K5EE@204457|Sphingomonadales	204457|Sphingomonadales	P	Nitrite reductase	nirD	-	1.7.1.15	ko:K00363	ko00910,ko01120,map00910,map01120	M00530	R00787	RC00176	ko00000,ko00001,ko00002,ko01000	-	-	-	Rieske,Rieske_2
SRD3_k127_3456184_1	1550073.JROH01000069_gene2829	0.0	1440.0	COG1251@1|root,COG1251@2|Bacteria,1MW58@1224|Proteobacteria,2TS8I@28211|Alphaproteobacteria,2K03B@204457|Sphingomonadales	204457|Sphingomonadales	C	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family	nirB	-	1.7.1.15	ko:K00362	ko00910,ko01120,map00910,map01120	M00530	R00787	RC00176	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2_BFD,NIR_SIR,NIR_SIR_ferr,Pyr_redox_2
SRD3_k127_3460899_11	483219.LILAB_24940	0.0003502	49.0	COG1020@1|root,COG1020@2|Bacteria,1QK4F@1224|Proteobacteria,42NH4@68525|delta/epsilon subdivisions,2WN7A@28221|Deltaproteobacteria	68525|delta/epsilon subdivisions	Q	non-ribosomal peptide synthetase	-	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C,Bac_luciferase,Condensation,PP-binding,Thioesterase
SRD3_k127_3460899_9	266779.Meso_2583	1.898e-36	147.0	COG2091@1|root,COG2091@2|Bacteria,1MZHC@1224|Proteobacteria,2UFA4@28211|Alphaproteobacteria,43M77@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	H	4'-phosphopantetheinyl transferase superfamily	-	-	-	ko:K06133	ko00770,map00770	-	R01625	RC00002	ko00000,ko00001,ko01000	-	-	-	ACPS
SRD3_k127_3460899_1	1550073.JROH01000079_gene2905	4.074e-144	474.0	COG2244@1|root,COG2244@2|Bacteria,1RANK@1224|Proteobacteria,2VFM4@28211|Alphaproteobacteria,2KDX8@204457|Sphingomonadales	204457|Sphingomonadales	S	Polysaccharide biosynthesis C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_synt_3,Polysacc_synt_C
SRD3_k127_3460899_0	1545915.JROG01000008_gene3490	4.844e-145	474.0	COG0477@1|root,COG2814@2|Bacteria,1MVSH@1224|Proteobacteria,2TUEW@28211|Alphaproteobacteria,2K3DH@204457|Sphingomonadales	204457|Sphingomonadales	EGP	Major Facilitator Superfamily	-	-	-	ko:K08151	-	M00668	-	-	ko00000,ko00002,ko01504,ko02000	2.A.1.2.38,2.A.1.2.39,2.A.1.2.4,2.A.1.2.41,2.A.1.2.68,2.A.1.2.75	-	-	MFS_1,Sugar_tr
SRD3_k127_3460899_3	1123269.NX02_27255	5.265e-128	419.0	COG2234@1|root,COG2234@2|Bacteria,1MXZS@1224|Proteobacteria,2V1PT@28211|Alphaproteobacteria,2K8V0@204457|Sphingomonadales	204457|Sphingomonadales	S	Peptidase family M28	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M28
SRD3_k127_3460899_5	663610.JQKO01000002_gene1164	2.517e-95	318.0	COG2207@1|root,COG2207@2|Bacteria	2|Bacteria	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
SRD3_k127_3460899_6	663610.JQKO01000002_gene1166	2.104e-63	220.0	COG3795@1|root,COG3795@2|Bacteria,1RIF6@1224|Proteobacteria,2UA75@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	DoxX-like family	-	-	-	-	-	-	-	-	-	-	-	-	DoxX_2
SRD3_k127_3460899_7	1449076.JOOE01000001_gene1794	1.825e-58	206.0	2B9KW@1|root,322Z5@2|Bacteria,1RJJB@1224|Proteobacteria,2UAVD@28211|Alphaproteobacteria,2K6EC@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3460899_8	1331060.RLDS_04575	4.861e-46	171.0	COG1633@1|root,COG1633@2|Bacteria,1RJUG@1224|Proteobacteria,2UATR@28211|Alphaproteobacteria,2K5EA@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF2383)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2383
SRD3_k127_3460899_10	234267.Acid_4769	3.147e-28	118.0	29WUP@1|root,30IG4@2|Bacteria,3Y82K@57723|Acidobacteria	57723|Acidobacteria	S	ASCH	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3460899_2	685778.AORL01000015_gene2487	2.788e-136	439.0	COG0583@1|root,COG0583@2|Bacteria,1MWY0@1224|Proteobacteria,2TSD9@28211|Alphaproteobacteria,2K1HX@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	-	-	-	ko:K17850	ko01501,map01501	M00628	-	-	ko00000,ko00001,ko00002,ko03000	-	-	-	HTH_1,LysR_substrate
SRD3_k127_3460899_4	573065.Astex_0282	2.425e-97	329.0	COG0657@1|root,COG0657@2|Bacteria,1N5QB@1224|Proteobacteria,2UQG8@28211|Alphaproteobacteria,2KI8B@204458|Caulobacterales	204458|Caulobacterales	I	alpha/beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3
SRD3_k127_3472990_11	1449076.JOOE01000004_gene9	1.879e-26	113.0	COG1538@1|root,COG1538@2|Bacteria,1MUZZ@1224|Proteobacteria,2TU4U@28211|Alphaproteobacteria,2K1W0@204457|Sphingomonadales	204457|Sphingomonadales	MU	RND efflux system, outer membrane lipoprotein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
SRD3_k127_3472990_8	745310.G432_14150	1.347e-49	186.0	COG1309@1|root,COG1309@2|Bacteria,1MZ9E@1224|Proteobacteria,2U0MU@28211|Alphaproteobacteria,2K4G0@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	TetR_C_11,TetR_C_7,TetR_N
SRD3_k127_3472990_3	1379701.JPJC01000099_gene2555	1.325e-115	377.0	COG1024@1|root,COG1024@2|Bacteria,1PJ4R@1224|Proteobacteria,2TSSU@28211|Alphaproteobacteria,2K14X@204457|Sphingomonadales	204457|Sphingomonadales	I	Belongs to the enoyl-CoA hydratase isomerase family	-	-	4.2.1.17	ko:K01692	ko00071,ko00280,ko00281,ko00310,ko00360,ko00362,ko00380,ko00410,ko00627,ko00640,ko00650,ko00903,ko00930,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00310,map00360,map00362,map00380,map00410,map00627,map00640,map00650,map00903,map00930,map01100,map01110,map01120,map01130,map01212	M00032,M00087	R03026,R03045,R04137,R04170,R04204,R04224,R04738,R04740,R04744,R04746,R04749,R05595,R06411,R06412,R06942,R08093	RC00831,RC00834,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
SRD3_k127_3472990_1	1545915.JROG01000003_gene839	8.228e-205	660.0	COG0318@1|root,COG0318@2|Bacteria,1MUIC@1224|Proteobacteria,2TRRZ@28211|Alphaproteobacteria,2K2K3@204457|Sphingomonadales	204457|Sphingomonadales	IQ	AMP-binding enzyme C-terminal domain	-	-	-	ko:K00666	-	-	-	-	ko00000,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
SRD3_k127_3472990_7	1112216.JH594425_gene1737	7.045e-56	223.0	COG2050@1|root,COG2050@2|Bacteria,1RHK6@1224|Proteobacteria,2U72Z@28211|Alphaproteobacteria,2K530@204457|Sphingomonadales	204457|Sphingomonadales	Q	protein, possibly involved in aromatic compounds catabolism	-	-	-	-	-	-	-	-	-	-	-	-	4HBT
SRD3_k127_3472990_6	1549858.MC45_11265	3.744e-59	207.0	COG2050@1|root,COG2050@2|Bacteria,1RITB@1224|Proteobacteria,2U58S@28211|Alphaproteobacteria,2K6CX@204457|Sphingomonadales	204457|Sphingomonadales	Q	protein, possibly involved in aromatic compounds catabolism	-	-	-	-	-	-	-	-	-	-	-	-	4HBT,4HBT_3
SRD3_k127_3472990_13	1292034.OR37_03616	2.129e-09	64.0	COG0454@1|root,COG0456@2|Bacteria	2|Bacteria	K	acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10,DUF4915,cNMP_binding
SRD3_k127_3472990_2	1112212.JH584235_gene3024	2.985e-170	546.0	COG2133@1|root,COG2133@2|Bacteria,1MV2E@1224|Proteobacteria,2TR47@28211|Alphaproteobacteria,2K0QG@204457|Sphingomonadales	204457|Sphingomonadales	G	glucose sorbosone	-	-	-	-	-	-	-	-	-	-	-	-	GSDH
SRD3_k127_3472990_5	1550073.JROH01000001_gene619	1.219e-76	261.0	COG0779@1|root,COG0779@2|Bacteria,1RDP2@1224|Proteobacteria,2TS4E@28211|Alphaproteobacteria,2K45N@204457|Sphingomonadales	204457|Sphingomonadales	S	Required for maturation of 30S ribosomal subunits	rimP	-	-	ko:K09748	-	-	-	-	ko00000,ko03009	-	-	-	DUF150,DUF150_C
SRD3_k127_3472990_0	1112212.JH584235_gene3022	4.608e-304	936.0	COG0195@1|root,COG0195@2|Bacteria,1MWT7@1224|Proteobacteria,2TRQN@28211|Alphaproteobacteria,2K1KF@204457|Sphingomonadales	204457|Sphingomonadales	K	Participates in both transcription termination and antitermination	nusA	-	-	ko:K02600	-	-	-	-	ko00000,ko03009,ko03021	-	-	-	HHH_5,KH_5,NusA_N,S1
SRD3_k127_3472990_10	1112214.AHIS01000026_gene985	1.594e-30	121.0	COG1942@1|root,COG1942@2|Bacteria,1NC22@1224|Proteobacteria,2UVJ7@28211|Alphaproteobacteria,2K67B@204457|Sphingomonadales	204457|Sphingomonadales	S	4-oxalocrotonate tautomerase	-	-	5.3.2.6	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	M00569	R03966,R05389	RC01040,RC01355	ko00000,ko00001,ko00002,ko01000	-	-	-	Tautomerase
SRD3_k127_3472990_14	1090320.KB900605_gene3414	0.0002152	45.0	COG1231@1|root,COG1231@2|Bacteria,1MUPQ@1224|Proteobacteria,2TRVT@28211|Alphaproteobacteria,2K1HZ@204457|Sphingomonadales	204457|Sphingomonadales	E	Flavin containing amine oxidoreductase	-	-	1.4.3.4	ko:K00274	ko00260,ko00330,ko00340,ko00350,ko00360,ko00380,ko00950,ko00982,ko01100,ko01110,ko04726,ko04728,ko05030,ko05031,ko05034,map00260,map00330,map00340,map00350,map00360,map00380,map00950,map00982,map01100,map01110,map04726,map04728,map05030,map05031,map05034	M00135	R02173,R02382,R02529,R02532,R02613,R02908,R02919,R04025,R04300,R04674,R04890,R04893,R04894,R04907,R04908,R08346,R08347,R08348,R11354	RC00062,RC00160,RC00225,RC00676,RC00807,RC00808,RC01808,RC02226,RC02713	ko00000,ko00001,ko00002,ko01000	-	-	-	Amino_oxidase
SRD3_k127_3472990_9	1112216.JH594425_gene554	7.161e-46	171.0	COG2827@1|root,COG2827@2|Bacteria,1MZME@1224|Proteobacteria,2UCNX@28211|Alphaproteobacteria,2K5XX@204457|Sphingomonadales	204457|Sphingomonadales	L	endonuclease containing a URI domain	-	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
SRD3_k127_3472990_4	1112214.AHIS01000026_gene984	4.365e-112	366.0	COG2740@1|root,COG2740@2|Bacteria,1RHPR@1224|Proteobacteria,2U9RY@28211|Alphaproteobacteria,2K2B7@204457|Sphingomonadales	204457|Sphingomonadales	K	Nucleic-acid-binding protein	-	-	-	ko:K07742	-	-	-	-	ko00000	-	-	-	DUF448
SRD3_k127_3472990_12	1112212.JH584235_gene3019	7.073e-21	91.0	COG0532@1|root,COG0532@2|Bacteria,1MV26@1224|Proteobacteria,2TQMY@28211|Alphaproteobacteria,2K1X7@204457|Sphingomonadales	204457|Sphingomonadales	J	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex	infB	-	-	ko:K02519	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	GTP_EFTU,IF-2,IF2_N,IF2_assoc
SRD3_k127_3489426_2	392499.Swit_2429	1.951e-50	185.0	COG0016@1|root,COG0016@2|Bacteria,1MVD7@1224|Proteobacteria,2TS2T@28211|Alphaproteobacteria,2K0XB@204457|Sphingomonadales	204457|Sphingomonadales	J	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily	pheS	-	6.1.1.20	ko:K01889	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Phe_tRNA-synt_N,tRNA-synt_2d
SRD3_k127_3489426_0	1123267.JONN01000001_gene2109	1.503e-118	389.0	28HGI@1|root,2Z7SC@2|Bacteria,1MWKC@1224|Proteobacteria,2TUQY@28211|Alphaproteobacteria,2K00Y@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3489426_1	1123267.JONN01000001_gene2113	1.968e-115	375.0	COG3800@1|root,COG3800@2|Bacteria,1MU50@1224|Proteobacteria,2TRKE@28211|Alphaproteobacteria,2K126@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	-	-	-	ko:K07110	-	-	-	-	ko00000,ko03000	-	-	-	DUF2083,HTH_19,HTH_3,Peptidase_M78
SRD3_k127_3508774_20	1449076.JOOE01000001_gene2250	4.196e-06	52.0	COG3704@1|root,COG3704@2|Bacteria,1MZCB@1224|Proteobacteria,2UG61@28211|Alphaproteobacteria,2K4GX@204457|Sphingomonadales	204457|Sphingomonadales	U	TrbL/VirB6 plasmid conjugal transfer protein	-	-	-	-	-	-	-	-	-	-	-	-	TrbL
SRD3_k127_3508774_7	1449076.JOOE01000001_gene2251	2.138e-99	333.0	COG3736@1|root,COG3736@2|Bacteria,1MXRC@1224|Proteobacteria,2U2AZ@28211|Alphaproteobacteria,2K279@204457|Sphingomonadales	204457|Sphingomonadales	U	Conjugal transfer protein TraJ	virB8	-	-	ko:K03203	ko03070,map03070	M00333	-	-	ko00000,ko00001,ko00002,ko02044	3.A.7	-	-	VirB8
SRD3_k127_3508774_13	1449076.JOOE01000001_gene2252	4.933e-68	246.0	COG3504@1|root,COG3504@2|Bacteria,1MVHJ@1224|Proteobacteria,2U07J@28211|Alphaproteobacteria,2K5GF@204457|Sphingomonadales	204457|Sphingomonadales	U	Conjugal transfer protein	-	-	-	-	-	-	-	-	-	-	-	-	CagX
SRD3_k127_3508774_9	1449076.JOOE01000001_gene2253	8.758e-89	307.0	COG2948@1|root,COG2948@2|Bacteria,1MU7U@1224|Proteobacteria,2TRRR@28211|Alphaproteobacteria,2JZWS@204457|Sphingomonadales	204457|Sphingomonadales	U	Type IV secretory pathway, VirB10	-	-	-	-	-	-	-	-	-	-	-	-	TrbI
SRD3_k127_3508774_2	1449076.JOOE01000001_gene2254	1.201e-151	490.0	COG0630@1|root,COG0630@2|Bacteria,1QUJ6@1224|Proteobacteria,2TW2D@28211|Alphaproteobacteria,2K02G@204457|Sphingomonadales	204457|Sphingomonadales	NU	IV secretion system protein	-	-	-	-	-	-	-	-	-	-	-	-	T2SSE
SRD3_k127_3508774_8	1446473.JHWH01000008_gene30	2.711e-97	323.0	COG1801@1|root,COG1801@2|Bacteria,1MU7F@1224|Proteobacteria,2U5WZ@28211|Alphaproteobacteria,2PZ3T@265|Paracoccus	28211|Alphaproteobacteria	S	Protein of unknown function DUF72	-	-	-	-	-	-	-	-	-	-	-	-	DUF72
SRD3_k127_3508774_15	1123269.NX02_05800	1.036e-53	202.0	COG0501@1|root,COG0501@2|Bacteria,1RH15@1224|Proteobacteria,2U9QN@28211|Alphaproteobacteria,2K2KC@204457|Sphingomonadales	204457|Sphingomonadales	M	Peptidase M48	-	-	-	-	-	-	-	-	-	-	-	-	PDZ_2,Peptidase_M48
SRD3_k127_3508774_10	172088.AUGA01000026_gene333	2.916e-86	301.0	COG0438@1|root,COG0438@2|Bacteria,1NB81@1224|Proteobacteria,2U3N3@28211|Alphaproteobacteria,3JX7E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Glycosyltransferase Family 4	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
SRD3_k127_3508774_12	419610.Mext_4621	5.177e-70	263.0	COG1922@1|root,COG1922@2|Bacteria,1PEXQ@1224|Proteobacteria,2V831@28211|Alphaproteobacteria,1JX92@119045|Methylobacteriaceae	28211|Alphaproteobacteria	M	glycosyl transferase, WecB TagA CpsF family	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tran_WecB
SRD3_k127_3508774_19	104623.Ser39006_03501	9.235e-26	119.0	2E5B4@1|root,33038@2|Bacteria,1P4FH@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3508774_14	485918.Cpin_3134	2.317e-56	205.0	COG0500@1|root,COG2226@2|Bacteria,4NURU@976|Bacteroidetes	976|Bacteroidetes	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_23
SRD3_k127_3508774_6	172088.AUGA01000026_gene344	8.379e-101	340.0	COG0438@1|root,COG0438@2|Bacteria,1R4NX@1224|Proteobacteria,2U1EN@28211|Alphaproteobacteria,3JXK2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_trans_4_4,Glycos_transf_1
SRD3_k127_3508774_18	1123269.NX02_02920	2.73e-34	147.0	COG0457@1|root,COG0457@2|Bacteria,1RFN9@1224|Proteobacteria,2VE56@28211|Alphaproteobacteria,2K2Z8@204457|Sphingomonadales	204457|Sphingomonadales	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3508774_1	1123269.NX02_02925	5.342e-177	580.0	COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,1MVI9@1224|Proteobacteria,2TT1Y@28211|Alphaproteobacteria,2K00D@204457|Sphingomonadales	204457|Sphingomonadales	D	protein involved in exopolysaccharide biosynthesis	-	-	-	ko:K16554	ko05111,map05111	-	-	-	ko00000,ko00001,ko02000	8.A.3.1	-	-	AAA_31,CbiA,GNVR,Wzz
SRD3_k127_3508774_16	1123269.NX02_02930	6.198e-52	192.0	COG1596@1|root,COG1596@2|Bacteria,1RE48@1224|Proteobacteria,2U75D@28211|Alphaproteobacteria,2K5VV@204457|Sphingomonadales	204457|Sphingomonadales	M	Periplasmic protein involved in polysaccharide export	gumB	-	-	ko:K01991	ko02026,map02026	-	-	-	ko00000,ko00001,ko02000	1.B.18	-	-	Poly_export,SLBB
SRD3_k127_3508774_17	1123269.NX02_02935	1.229e-49	194.0	COG3307@1|root,COG3307@2|Bacteria,1N225@1224|Proteobacteria,2U6JI@28211|Alphaproteobacteria,2K33M@204457|Sphingomonadales	204457|Sphingomonadales	M	O-Antigen ligase	-	-	-	-	-	-	-	-	-	-	-	-	Wzy_C
SRD3_k127_3508774_3	1123269.NX02_28170	1.363e-123	414.0	COG2148@1|root,COG2148@2|Bacteria,1MV6W@1224|Proteobacteria,2TRZA@28211|Alphaproteobacteria,2K10K@204457|Sphingomonadales	204457|Sphingomonadales	M	sugar transferase	-	-	-	ko:K20997	ko02025,map02025	-	-	-	ko00000,ko00001	-	-	-	Bac_transf
SRD3_k127_3508774_5	1449076.JOOE01000001_gene3035	3.309e-105	367.0	COG0438@1|root,COG0438@2|Bacteria	2|Bacteria	M	transferase activity, transferring glycosyl groups	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1,Glycos_transf_2
SRD3_k127_3508774_4	1449076.JOOE01000001_gene3034	1.459e-113	382.0	COG0438@1|root,COG0438@2|Bacteria,1MYTB@1224|Proteobacteria	1224|Proteobacteria	M	Glycosyl transferase group 1	treT	-	2.4.1.245	ko:K13057	ko00500,ko01100,map00500,map01100	-	R08946,R10525,R11306	RC00005,RC00049,RC02748	ko00000,ko00001,ko01000	-	GT4	-	Glycos_transf_1
SRD3_k127_3508774_0	1449076.JOOE01000001_gene3032	1.422e-184	584.0	COG1032@1|root,COG1032@2|Bacteria,1MWR0@1224|Proteobacteria,2TUPK@28211|Alphaproteobacteria,2KD0S@204457|Sphingomonadales	204457|Sphingomonadales	C	Elongator protein 3, MiaB family, Radical SAM	-	-	-	-	-	-	-	-	-	-	-	-	B12-binding,Radical_SAM
SRD3_k127_3510677_0	1112216.JH594426_gene3950	1.008e-190	601.0	COG2234@1|root,COG2234@2|Bacteria,1R6BQ@1224|Proteobacteria,2U2SM@28211|Alphaproteobacteria,2K3NR@204457|Sphingomonadales	204457|Sphingomonadales	S	Transferrin receptor-like dimerisation domain	-	-	-	-	-	-	-	-	-	-	-	-	PA,Peptidase_M28,TFR_dimer
SRD3_k127_3510677_1	579138.Zymop_0824	1.551e-23	109.0	COG2963@1|root,COG2963@2|Bacteria,1N24I@1224|Proteobacteria,2UGNR@28211|Alphaproteobacteria,2KB03@204457|Sphingomonadales	204457|Sphingomonadales	L	transposase activity	-	-	-	-	-	-	-	-	-	-	-	-	HTH_23
SRD3_k127_3522469_16	1449076.JOOE01000002_gene1243	2.885e-130	422.0	COG0596@1|root,COG0596@2|Bacteria,1MUVB@1224|Proteobacteria,2TREP@28211|Alphaproteobacteria,2JZYH@204457|Sphingomonadales	204457|Sphingomonadales	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
SRD3_k127_3522469_19	1163409.UUA_02281	6.817e-120	396.0	COG1566@1|root,COG1566@2|Bacteria,1MU7I@1224|Proteobacteria,1RMAD@1236|Gammaproteobacteria,1X6D5@135614|Xanthomonadales	135614|Xanthomonadales	V	Multidrug resistance efflux pump	rmrA	-	-	ko:K03543	-	M00701	-	-	ko00000,ko00002,ko02000	8.A.1.1	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
SRD3_k127_3522469_30	1123269.NX02_08715	1.618e-55	199.0	COG2050@1|root,COG2050@2|Bacteria,1RK46@1224|Proteobacteria,2U9U1@28211|Alphaproteobacteria,2K58E@204457|Sphingomonadales	204457|Sphingomonadales	Q	Thioesterase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	4HBT
SRD3_k127_3522469_31	1163407.UU7_04057	1.479e-50	188.0	COG1309@1|root,COG1309@2|Bacteria,1N1Q3@1224|Proteobacteria,1S6W5@1236|Gammaproteobacteria,1X7SX@135614|Xanthomonadales	135614|Xanthomonadales	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SRD3_k127_3522469_3	69395.JQLZ01000001_gene2933	2.352e-246	772.0	COG0477@1|root,COG0477@2|Bacteria,1RGPN@1224|Proteobacteria,2TQKW@28211|Alphaproteobacteria,2KI6S@204458|Caulobacterales	28211|Alphaproteobacteria	P	drug resistance transporter, EmrB QacA subfamily	-	-	-	ko:K03446	-	M00701	-	-	ko00000,ko00002,ko02000	2.A.1.3	-	-	MFS_1
SRD3_k127_3522469_39	685778.AORL01000009_gene3240	4.797e-13	76.0	2AA4J@1|root,30ZDH@2|Bacteria,1NKJ2@1224|Proteobacteria,2UK6J@28211|Alphaproteobacteria,2K6SY@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3522469_1	685778.AORL01000009_gene3241	0.0	1067.0	COG1629@1|root,COG4771@2|Bacteria,1MXSN@1224|Proteobacteria,2U177@28211|Alphaproteobacteria,2KEQ3@204457|Sphingomonadales	204457|Sphingomonadales	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SRD3_k127_3522469_0	194867.ALBQ01000032_gene1002	0.0	1537.0	COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,1MV8W@1224|Proteobacteria,2TURS@28211|Alphaproteobacteria,2JZWC@204457|Sphingomonadales	204457|Sphingomonadales	P	TonB-dependent Receptor Plug Domain	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SRD3_k127_3522469_5	1449076.JOOE01000002_gene1097	1.283e-221	697.0	COG3866@1|root,COG3866@2|Bacteria,1MUT3@1224|Proteobacteria,2U57M@28211|Alphaproteobacteria,2KCG6@204457|Sphingomonadales	204457|Sphingomonadales	G	Pectate lyase	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3522469_7	1123269.NX02_17490	2.697e-214	671.0	COG0654@1|root,COG0654@2|Bacteria,1MV8T@1224|Proteobacteria,2TRB8@28211|Alphaproteobacteria,2K1NN@204457|Sphingomonadales	204457|Sphingomonadales	CH	Catalyzes the formation of protocatechuate from 4-hydroxybenzoate	-	-	1.14.13.2	ko:K00481	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	-	R01298	RC00046	ko00000,ko00001,ko01000	-	-	-	FAD_binding_3
SRD3_k127_3522469_9	1123269.NX02_17565	8.007e-185	587.0	COG2271@1|root,COG2271@2|Bacteria,1P24P@1224|Proteobacteria,2URTW@28211|Alphaproteobacteria,2KECT@204457|Sphingomonadales	204457|Sphingomonadales	G	Sugar (and other) transporter	-	-	-	ko:K08195	-	-	-	-	ko00000,ko02000	2.A.1.15	-	-	MFS_1,MFS_4
SRD3_k127_3522469_33	1550073.JROH01000003_gene2408	3.808e-45	181.0	COG1846@1|root,COG1846@2|Bacteria,1N7PQ@1224|Proteobacteria,2UF5S@28211|Alphaproteobacteria,2K5FB@204457|Sphingomonadales	204457|Sphingomonadales	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SRD3_k127_3522469_28	1192759.AKIB01000017_gene1867	1.008e-57	205.0	2DMP1@1|root,32SS8@2|Bacteria,1N0XZ@1224|Proteobacteria,2UBZ9@28211|Alphaproteobacteria,2K5H8@204457|Sphingomonadales	204457|Sphingomonadales	S	Belongs to the UPF0311 family	-	-	-	-	-	-	-	-	-	-	-	-	DUF3237
SRD3_k127_3522469_8	1112212.JH584235_gene3781	2.916e-188	594.0	COG0115@1|root,COG0115@2|Bacteria,1MVB0@1224|Proteobacteria,2TR1H@28211|Alphaproteobacteria,2K0G3@204457|Sphingomonadales	204457|Sphingomonadales	E	Branched-chain amino acid aminotransferase	ilvE	-	2.6.1.42	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00036,M00119,M00570	R01090,R01214,R02199,R10991	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_4
SRD3_k127_3522469_27	1090319.KE386571_gene1584	3.347e-72	246.0	COG1846@1|root,COG1846@2|Bacteria,1RIX7@1224|Proteobacteria,2U94M@28211|Alphaproteobacteria,2K4GP@204457|Sphingomonadales	204457|Sphingomonadales	K	MarR family transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	MarR_2
SRD3_k127_3522469_10	323097.Nham_2708	1.076e-184	594.0	COG2010@1|root,COG2010@2|Bacteria,1MVYK@1224|Proteobacteria,2U18V@28211|Alphaproteobacteria,3JRFQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3522469_21	1112216.JH594425_gene2402	1.173e-111	366.0	COG0345@1|root,COG0345@2|Bacteria,1R5J1@1224|Proteobacteria,2TTY7@28211|Alphaproteobacteria,2K353@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline	proC	-	1.5.1.2	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	M00015	R01248,R01251,R03291,R03293	RC00054,RC00083	ko00000,ko00001,ko00002,ko01000	-	-	-	F420_oxidored,P5CR_dimer
SRD3_k127_3522469_22	1112214.AHIS01000102_gene1565	1.371e-99	327.0	COG5465@1|root,COG5465@2|Bacteria,1REC1@1224|Proteobacteria,2U7UP@28211|Alphaproteobacteria,2K1T3@204457|Sphingomonadales	204457|Sphingomonadales	S	Putative bacterial sensory transduction regulator	-	-	-	-	-	-	-	-	-	-	-	-	YbjN
SRD3_k127_3522469_34	1112214.AHIS01000102_gene1566	2.792e-37	142.0	COG2960@1|root,COG2960@2|Bacteria,1N725@1224|Proteobacteria,2UFEP@28211|Alphaproteobacteria,2K74V@204457|Sphingomonadales	204457|Sphingomonadales	S	Membrane fusogenic activity	-	-	-	ko:K09806	-	-	-	-	ko00000	-	-	-	BMFP
SRD3_k127_3522469_23	1112214.AHIS01000102_gene1567	1.833e-77	264.0	COG3476@1|root,COG3476@2|Bacteria,1MZC1@1224|Proteobacteria,2UBYB@28211|Alphaproteobacteria,2K4UV@204457|Sphingomonadales	204457|Sphingomonadales	T	Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)	bzrP	-	-	ko:K05770	ko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166	-	-	-	ko00000,ko00001,ko02000	9.A.24	-	-	TspO_MBR
SRD3_k127_3522469_15	1090318.ATTI01000001_gene1465	1.242e-133	428.0	COG1189@1|root,COG1189@2|Bacteria,1MWP5@1224|Proteobacteria,2TRW9@28211|Alphaproteobacteria,2K0J2@204457|Sphingomonadales	204457|Sphingomonadales	J	Hemolysin	-	-	2.1.1.226,2.1.1.227	ko:K06442	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	FtsJ,S4
SRD3_k127_3522469_17	1112212.JH584235_gene3774	8.087e-129	415.0	COG3545@1|root,COG3545@2|Bacteria,1RDB7@1224|Proteobacteria,2U607@28211|Alphaproteobacteria,2K2JM@204457|Sphingomonadales	204457|Sphingomonadales	S	esterase of the alpha beta hydrolase fold	-	-	-	ko:K07002	-	-	-	-	ko00000	-	-	-	Ser_hydrolase
SRD3_k127_3522469_18	1112212.JH584235_gene3773	4.887e-122	394.0	COG0664@1|root,COG0664@2|Bacteria,1RC68@1224|Proteobacteria,2U5S4@28211|Alphaproteobacteria,2K4AN@204457|Sphingomonadales	204457|Sphingomonadales	K	Crp-like helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,cNMP_binding
SRD3_k127_3522469_40	1112212.JH584235_gene3772	5.483e-07	56.0	2BPSW@1|root,32IK8@2|Bacteria,1Q8EG@1224|Proteobacteria,2VEM2@28211|Alphaproteobacteria,2K83D@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3522469_38	1112212.JH584235_gene3771	5.415e-14	74.0	2BNKP@1|root,32H9J@2|Bacteria,1Q7RC@1224|Proteobacteria,2VDWX@28211|Alphaproteobacteria,2K879@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3522469_29	1346791.M529_11250	4e-56	197.0	COG3169@1|root,COG3169@2|Bacteria,1RHBQ@1224|Proteobacteria,2U9M1@28211|Alphaproteobacteria,2K5R2@204457|Sphingomonadales	204457|Sphingomonadales	S	Putative member of DMT superfamily (DUF486)	-	-	-	ko:K09922	-	-	-	-	ko00000	-	-	-	DMT_6
SRD3_k127_3522469_25	1112214.AHIS01000102_gene1572	1.822e-74	259.0	COG3895@1|root,COG3895@2|Bacteria,1N8G9@1224|Proteobacteria,2UQIF@28211|Alphaproteobacteria,2K4MY@204457|Sphingomonadales	204457|Sphingomonadales	S	Periplasmic Protein	-	-	-	-	-	-	-	-	-	-	-	-	MliC
SRD3_k127_3522469_36	1123269.NX02_26235	1.376e-28	120.0	COG0848@1|root,COG0848@2|Bacteria,1Q7MG@1224|Proteobacteria,2VDST@28211|Alphaproteobacteria,2K5XJ@204457|Sphingomonadales	204457|Sphingomonadales	U	Biopolymer transport protein ExbD/TolR	-	-	-	ko:K03559	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	ExbD
SRD3_k127_3522469_24	1449076.JOOE01000004_gene107	2.976e-77	264.0	COG4430@1|root,COG4430@2|Bacteria,1RG2R@1224|Proteobacteria,2UAYY@28211|Alphaproteobacteria,2K5FM@204457|Sphingomonadales	204457|Sphingomonadales	S	Bacteriocin-protection, YdeI or OmpD-Associated	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801,OmdA
SRD3_k127_3522469_35	1112212.JH584235_gene3770	7.989e-34	133.0	2BKV4@1|root,32FBG@2|Bacteria,1Q9RW@1224|Proteobacteria,2VDUX@28211|Alphaproteobacteria,2K64P@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3522469_13	1549858.MC45_12280	1.02e-142	464.0	COG0477@1|root,COG2814@2|Bacteria,1MW19@1224|Proteobacteria,2TRJ1@28211|Alphaproteobacteria,2K0JH@204457|Sphingomonadales	204457|Sphingomonadales	EGP	Major facilitator superfamily	-	-	-	ko:K07552	-	-	-	-	ko00000,ko02000	2.A.1.2	-	-	MFS_1
SRD3_k127_3522469_32	1112212.JH584235_gene3767	5.379e-50	183.0	2B9KF@1|root,322YP@2|Bacteria,1P8XS@1224|Proteobacteria,2UX7H@28211|Alphaproteobacteria,2K64E@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3522469_11	1379701.JPJC01000088_gene2059	1.165e-182	578.0	COG3491@1|root,COG3491@2|Bacteria,1MUNT@1224|Proteobacteria,2TU3Y@28211|Alphaproteobacteria,2K1Y3@204457|Sphingomonadales	204457|Sphingomonadales	C	Belongs to the iron ascorbate-dependent oxidoreductase family	-	-	-	-	-	-	-	-	-	-	-	-	2OG-FeII_Oxy,DIOX_N
SRD3_k127_3522469_4	1550073.JROH01000006_gene1446	6.074e-229	714.0	COG0460@1|root,COG0460@2|Bacteria,1MUDC@1224|Proteobacteria,2TQWS@28211|Alphaproteobacteria,2K2BW@204457|Sphingomonadales	204457|Sphingomonadales	E	homoserine dehydrogenase	thrA	-	1.1.1.3	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	M00017,M00018	R01773,R01775	RC00087	ko00000,ko00001,ko00002,ko01000	-	-	-	ACT,Homoserine_dh,NAD_binding_3
SRD3_k127_3522469_37	1550073.JROH01000006_gene1445	3.572e-20	96.0	2BN42@1|root,32GQY@2|Bacteria,1Q8BC@1224|Proteobacteria,2VEHI@28211|Alphaproteobacteria,2K7W9@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3522469_26	1112214.AHIS01000014_gene124	1.07e-73	255.0	COG1832@1|root,COG1832@2|Bacteria,1N03D@1224|Proteobacteria,2TUIY@28211|Alphaproteobacteria,2K4FQ@204457|Sphingomonadales	204457|Sphingomonadales	S	CoA binding domain	-	-	-	ko:K06929	-	-	-	-	ko00000	-	-	-	CoA_binding_2
SRD3_k127_3522469_12	1112212.JH584235_gene3761	5.429e-152	487.0	COG0489@1|root,COG0489@2|Bacteria,1MU7R@1224|Proteobacteria,2TRDM@28211|Alphaproteobacteria,2K1RH@204457|Sphingomonadales	204457|Sphingomonadales	D	Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP	-	-	-	ko:K03593	-	-	-	-	ko00000,ko03029,ko03036	-	-	-	ParA
SRD3_k127_3522469_14	1549858.MC45_08365	1.201e-139	453.0	COG0330@1|root,COG0330@2|Bacteria,1MUM2@1224|Proteobacteria,2TRTP@28211|Alphaproteobacteria,2K20N@204457|Sphingomonadales	204457|Sphingomonadales	O	HflC and HflK could encode or regulate a protease	hflK	-	-	ko:K04088	-	M00742	-	-	ko00000,ko00002,ko01000	-	-	-	Band_7
SRD3_k127_3522469_20	1090320.KB900605_gene555	3.034e-117	387.0	COG0330@1|root,COG0330@2|Bacteria,1MV7R@1224|Proteobacteria,2TRP4@28211|Alphaproteobacteria,2K1HR@204457|Sphingomonadales	204457|Sphingomonadales	O	HflC and HflK could regulate a protease	hflC	-	-	ko:K04087	-	M00742	-	-	ko00000,ko00002,ko01000	-	-	-	Band_7
SRD3_k127_3522469_6	629773.AORY01000017_gene2895	4.712e-215	690.0	COG0265@1|root,COG0265@2|Bacteria,1MU63@1224|Proteobacteria,2TQPZ@28211|Alphaproteobacteria,2K08H@204457|Sphingomonadales	204457|Sphingomonadales	M	Belongs to the peptidase S1C family	-	-	3.4.21.107	ko:K04771	ko01503,ko02020,map01503,map02020	M00728	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	-	-	-	PDZ_2,Trypsin_2
SRD3_k127_3522469_2	1112212.JH584235_gene3757	2.216e-297	920.0	COG0433@1|root,COG0433@2|Bacteria,1MU59@1224|Proteobacteria,2TRU8@28211|Alphaproteobacteria,2JZYW@204457|Sphingomonadales	204457|Sphingomonadales	S	Bacterial protein of unknown function (DUF853)	-	-	-	ko:K06915	-	-	-	-	ko00000	-	-	-	DUF853
SRD3_k127_3523959_4	880073.Calab_3038	1.349e-16	93.0	COG0110@1|root,COG0110@2|Bacteria	2|Bacteria	S	O-acyltransferase activity	-	-	-	-	-	-	-	-	-	-	-	-	Hexapep
SRD3_k127_3523959_3	868131.MSWAN_1822	2.835e-22	105.0	COG0463@1|root,COG1819@1|root,arCOG01385@2157|Archaea,arCOG01393@2157|Archaea,2XVTU@28890|Euryarchaeota,23NU6@183925|Methanobacteria	183925|Methanobacteria	M	Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_3,Glycos_transf_2
SRD3_k127_3523959_1	392499.Swit_1115	9.286e-68	234.0	COG1522@1|root,COG1522@2|Bacteria,1MX7R@1224|Proteobacteria,2U7B2@28211|Alphaproteobacteria,2K4US@204457|Sphingomonadales	204457|Sphingomonadales	K	helix_turn_helix ASNC type	-	-	-	ko:K03719	-	-	-	-	ko00000,ko03000,ko03036	-	-	-	AsnC_trans_reg,HTH_24,HTH_AsnC-type
SRD3_k127_3523959_0	392499.Swit_1114	0.0	1553.0	COG0506@1|root,COG4230@1|root,COG0506@2|Bacteria,COG4230@2|Bacteria,1MV93@1224|Proteobacteria,2TQPT@28211|Alphaproteobacteria,2K1B6@204457|Sphingomonadales	204457|Sphingomonadales	CE	Oxidizes proline to glutamate for use as a carbon and nitrogen source	putA	-	1.2.1.88,1.5.5.2	ko:K13821	ko00250,ko00330,ko01100,ko01110,ko01130,map00250,map00330,map01100,map01110,map01130	-	R00245,R00707,R00708,R01253,R04444,R04445,R05051	RC00080,RC00083,RC00216,RC00242,RC00255	ko00000,ko00001,ko01000,ko03000	-	-	-	Aldedh,Pro_dh,Pro_dh-DNA_bdg
SRD3_k127_3523959_2	392499.Swit_3961	1.04e-64	226.0	COG2606@1|root,COG2606@2|Bacteria,1RD82@1224|Proteobacteria,2U7H0@28211|Alphaproteobacteria,2K43C@204457|Sphingomonadales	204457|Sphingomonadales	S	Prolyl-tRNA synthetase	-	-	-	-	-	-	-	-	-	-	-	-	tRNA_edit
SRD3_k127_3523959_5	1408224.SAMCCGM7_c3698	9.26e-10	60.0	COG1834@1|root,COG1834@2|Bacteria,1MZ9U@1224|Proteobacteria,2TT08@28211|Alphaproteobacteria,4BDPT@82115|Rhizobiaceae	28211|Alphaproteobacteria	E	Amidinotransferase	-	-	3.5.3.18	ko:K01482	-	-	-	-	ko00000,ko01000,ko04147	-	-	-	Amidinotransf
SRD3_k127_3524006_0	13690.CP98_02506	1.28e-212	664.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TR78@28211|Alphaproteobacteria,2K0AS@204457|Sphingomonadales	204457|Sphingomonadales	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	1.3.8.12	ko:K14448	ko00630,ko01120,ko01200,map00630,map01120,map01200	M00373	R09293	RC02483	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SRD3_k127_3524006_1	1470591.BW41_01396	6.111e-212	671.0	COG2989@1|root,COG2989@2|Bacteria,1MV14@1224|Proteobacteria,2TRJ9@28211|Alphaproteobacteria,2K0KA@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	ko:K21470	-	-	-	-	ko00000,ko01002,ko01011	-	-	-	PG_binding_1,YkuD
SRD3_k127_3524006_2	1522072.IL54_4108	3.445e-141	472.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,2K0K1@204457|Sphingomonadales	204457|Sphingomonadales	T	Putative diguanylate phosphodiesterase	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,PAS_3,PAS_4,PAS_7,PAS_9
SRD3_k127_3524006_3	1121028.ARQE01000009_gene4228	1.284e-102	343.0	COG1028@1|root,COG1028@2|Bacteria,1Q7EW@1224|Proteobacteria,2UAHR@28211|Alphaproteobacteria	28211|Alphaproteobacteria	IQ	KR domain	-	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
SRD3_k127_3524006_5	195253.Syn6312_2740	9.261e-09	61.0	2DRDY@1|root,33BC0@2|Bacteria	2|Bacteria	S	PFAM Coenzyme PQQ synthesis protein D (PqqD)	-	-	-	-	-	-	-	-	-	-	-	-	PqqD
SRD3_k127_3524006_4	998674.ATTE01000001_gene422	2.776e-30	134.0	COG1835@1|root,COG1835@2|Bacteria,1PGUN@1224|Proteobacteria,1SXK7@1236|Gammaproteobacteria,462ZT@72273|Thiotrichales	72273|Thiotrichales	I	Acyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
SRD3_k127_3524006_6	391625.PPSIR1_38941	2.902e-05	53.0	COG1032@1|root,COG1032@2|Bacteria,1NAY8@1224|Proteobacteria,42TR8@68525|delta/epsilon subdivisions,2WQC1@28221|Deltaproteobacteria,2YUBN@29|Myxococcales	28221|Deltaproteobacteria	C	Elongator protein 3, MiaB family, Radical SAM	-	-	-	-	-	-	-	-	-	-	-	-	B12-binding,Radical_SAM
SRD3_k127_3529579_0	1449076.JOOE01000004_gene317	0.0	1542.0	COG1048@1|root,COG1048@2|Bacteria,1MU9T@1224|Proteobacteria,2TT3T@28211|Alphaproteobacteria,2K0CP@204457|Sphingomonadales	204457|Sphingomonadales	C	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate	acnA	-	4.2.1.3	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	M00009,M00010,M00012,M00173,M00740	R01324,R01325,R01900	RC00497,RC00498,RC00618	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Aconitase,Aconitase_C
SRD3_k127_3529579_6	1081640.AGFU01000017_gene1845	3.123e-84	284.0	COG0652@1|root,COG0652@2|Bacteria,1RGF5@1224|Proteobacteria,2UEDE@28211|Alphaproteobacteria,2KCH7@204457|Sphingomonadales	204457|Sphingomonadales	M	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	-	-	5.2.1.8	ko:K03767	ko01503,ko04217,map01503,map04217	-	-	-	ko00000,ko00001,ko01000,ko03110,ko04147	-	-	-	Pro_isomerase
SRD3_k127_3529579_7	1090319.KE386571_gene119	7.613e-73	249.0	COG2032@1|root,COG2032@2|Bacteria,1RGV4@1224|Proteobacteria,2UC22@28211|Alphaproteobacteria,2K541@204457|Sphingomonadales	204457|Sphingomonadales	P	Destroys radicals which are normally produced within the cells and which are toxic to biological systems	sodC	-	1.15.1.1	ko:K04565	ko04146,ko04213,ko05014,ko05016,ko05020,map04146,map04213,map05014,map05016,map05020	-	-	-	ko00000,ko00001,ko01000	-	-	-	Sod_Cu
SRD3_k127_3529579_8	1007104.SUS17_1512	1.693e-70	243.0	COG1514@1|root,COG1514@2|Bacteria,1RDB2@1224|Proteobacteria,2U7FV@28211|Alphaproteobacteria,2K3F8@204457|Sphingomonadales	204457|Sphingomonadales	J	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester	-	-	3.1.4.58	ko:K01975	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	LigT_PEase
SRD3_k127_3529579_1	1112212.JH584235_gene1137	8.582e-118	387.0	COG0670@1|root,COG0670@2|Bacteria,1MU69@1224|Proteobacteria,2TRSF@28211|Alphaproteobacteria,2K14K@204457|Sphingomonadales	204457|Sphingomonadales	S	Belongs to the BI1 family	-	-	-	ko:K06890	-	-	-	-	ko00000	-	-	-	Bax1-I
SRD3_k127_3529579_2	1112216.JH594425_gene2433	1.775e-117	385.0	COG1305@1|root,COG1305@2|Bacteria,1MWAI@1224|Proteobacteria,2TURT@28211|Alphaproteobacteria,2K2E9@204457|Sphingomonadales	204457|Sphingomonadales	E	Transglutaminase-like superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Transglut_core
SRD3_k127_3529579_9	1112212.JH584235_gene1139	1.369e-30	123.0	2AMBY@1|root,31C72@2|Bacteria,1Q873@1224|Proteobacteria,2VED0@28211|Alphaproteobacteria,2K7JY@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3529579_4	1449076.JOOE01000003_gene3074	2.314e-99	329.0	2AFT8@1|root,315VF@2|Bacteria,1RAPJ@1224|Proteobacteria,2U6M6@28211|Alphaproteobacteria,2K2CZ@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3529579_10	1112212.JH584235_gene2677	0.0002962	43.0	COG0346@1|root,COG0351@1|root,COG0346@2|Bacteria,COG0351@2|Bacteria,1MU9J@1224|Proteobacteria,2TUKR@28211|Alphaproteobacteria,2K24Q@204457|Sphingomonadales	204457|Sphingomonadales	H	Phosphomethylpyrimidine kinase	thiD	-	2.7.1.49,2.7.4.7	ko:K00941	ko00730,ko01100,map00730,map01100	M00127	R03471,R04509	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyoxalase,Phos_pyr_kin
SRD3_k127_3529579_5	1090320.KB900605_gene1532	7.997e-96	332.0	COG3921@1|root,COG3921@2|Bacteria,1N3WR@1224|Proteobacteria,2U9V0@28211|Alphaproteobacteria,2KD3Y@204457|Sphingomonadales	204457|Sphingomonadales	S	Extensin-like protein C-terminus	-	-	-	-	-	-	-	-	-	-	-	-	Extensin-like_C
SRD3_k127_3529579_3	1112212.JH584235_gene3629	1.316e-114	374.0	COG1051@1|root,COG1051@2|Bacteria,1QUPQ@1224|Proteobacteria,2TW3M@28211|Alphaproteobacteria,2K0RT@204457|Sphingomonadales	204457|Sphingomonadales	F	COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
SRD3_k127_3532294_2	1449076.JOOE01000002_gene1076	4.682e-09	61.0	COG0451@1|root,COG0451@2|Bacteria,1NYJW@1224|Proteobacteria,2U9PX@28211|Alphaproteobacteria,2K1SS@204457|Sphingomonadales	204457|Sphingomonadales	GM	GDP-mannose 4,6 dehydratase	-	-	4.2.1.46	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	M00793	R06513	RC00402	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase
SRD3_k127_3532294_0	1449076.JOOE01000002_gene1075	1.402e-211	670.0	2FHNJ@1|root,349G8@2|Bacteria,1P0XF@1224|Proteobacteria,2UUY2@28211|Alphaproteobacteria,2K299@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	GT87
SRD3_k127_3532294_1	1449076.JOOE01000002_gene1074	6.406e-40	151.0	COG0463@1|root,COG0463@2|Bacteria,1R6J7@1224|Proteobacteria,2TVBR@28211|Alphaproteobacteria,2K39J@204457|Sphingomonadales	204457|Sphingomonadales	M	Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
SRD3_k127_3533827_5	754035.Mesau_03120	5.47e-15	75.0	COG0784@1|root,COG3437@1|root,COG5002@1|root,COG0784@2|Bacteria,COG3437@2|Bacteria,COG5002@2|Bacteria,1NC9X@1224|Proteobacteria,2TXI0@28211|Alphaproteobacteria,43JGC@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	T	Domain present in phytochromes and cGMP-specific phosphodiesterases.	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HATPase_c,HisKA,Response_reg
SRD3_k127_3533827_0	1449076.JOOE01000002_gene989	1.196e-273	857.0	COG3437@1|root,COG4191@1|root,COG3437@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TQQ9@28211|Alphaproteobacteria,2K01C@204457|Sphingomonadales	204457|Sphingomonadales	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	CHASE8,GAF,GAF_2,HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9,Response_reg
SRD3_k127_3533827_3	1121106.JQKB01000029_gene4877	4.488e-57	217.0	28MCN@1|root,2ZAQR@2|Bacteria,1N00X@1224|Proteobacteria,2UG9Y@28211|Alphaproteobacteria,2JUVD@204441|Rhodospirillales	204441|Rhodospirillales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3533827_4	1007103.AFHW01000138_gene1449	6.12e-44	180.0	COG5632@1|root,COG5632@2|Bacteria,1UYW5@1239|Firmicutes,4HKY1@91061|Bacilli,26SMX@186822|Paenibacillaceae	91061|Bacilli	M	N-acetylmuramoyl-L-alanine amidase	-	-	-	-	-	-	-	-	-	-	-	-	Amidase_2
SRD3_k127_3533827_2	189753.AXAS01000001_gene3583	9.837e-60	228.0	COG4322@1|root,COG4322@2|Bacteria,1PEBM@1224|Proteobacteria,2VBXF@28211|Alphaproteobacteria,3K4W5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized protein conserved in bacteria (DUF2272)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2272
SRD3_k127_3533827_1	631454.N177_3466	2.697e-148	473.0	28KEA@1|root,2ZA0J@2|Bacteria,1R5TS@1224|Proteobacteria,2U48U@28211|Alphaproteobacteria,1JPR2@119043|Rhodobiaceae	28211|Alphaproteobacteria	H	Sulfotransferase domain	-	-	2.8.2.1	ko:K01014	ko05204,map05204	-	R01242	RC00007,RC00128	ko00000,ko00001,ko01000	-	-	-	Sulfotransfer_1
SRD3_k127_3558355_7	1112214.AHIS01000101_gene1603	5.277e-104	340.0	COG0625@1|root,COG0625@2|Bacteria,1PHM1@1224|Proteobacteria,2TTQZ@28211|Alphaproteobacteria,2K0AP@204457|Sphingomonadales	204457|Sphingomonadales	O	Glutathione S-transferase	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_2,GST_N_3
SRD3_k127_3558355_5	1112214.AHIS01000101_gene1604	1.488e-126	411.0	COG0657@1|root,COG0657@2|Bacteria,1N2XW@1224|Proteobacteria,2U3QT@28211|Alphaproteobacteria,2K2SB@204457|Sphingomonadales	204457|Sphingomonadales	I	Carboxylesterase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3
SRD3_k127_3558355_8	1380355.JNIJ01000104_gene3858	1.768e-98	329.0	COG3023@1|root,COG3409@1|root,COG3023@2|Bacteria,COG3409@2|Bacteria,1PEDI@1224|Proteobacteria,2V4YX@28211|Alphaproteobacteria,3K1VB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Putative peptidoglycan binding domain	-	-	-	-	-	-	-	-	-	-	-	-	PG_binding_1
SRD3_k127_3558355_3	1081640.AGFU01000001_gene489	5.246e-152	485.0	COG0451@1|root,COG0451@2|Bacteria,1QP8J@1224|Proteobacteria,2U09V@28211|Alphaproteobacteria,2K1VA@204457|Sphingomonadales	204457|Sphingomonadales	GM	Male sterility protein	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase
SRD3_k127_3558355_9	1449076.JOOE01000002_gene1300	9.29e-86	297.0	COG2010@1|root,COG2010@2|Bacteria,1MXXQ@1224|Proteobacteria,2U38E@28211|Alphaproteobacteria,2KCD6@204457|Sphingomonadales	204457|Sphingomonadales	C	Cytochrome C oxidase, cbb3-type, subunit III	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3558355_2	1379701.JPJC01000114_gene706	3.276e-167	558.0	COG1629@1|root,COG1629@2|Bacteria,1QVGQ@1224|Proteobacteria,2TWFU@28211|Alphaproteobacteria,2KETH@204457|Sphingomonadales	204457|Sphingomonadales	P	transport	-	-	-	-	-	-	-	-	-	-	-	-	Plug
SRD3_k127_3558355_0	1192759.AKIB01000006_gene40	3.614e-310	957.0	COG0069@1|root,COG0069@2|Bacteria,1MU7B@1224|Proteobacteria,2TREH@28211|Alphaproteobacteria,2K14G@204457|Sphingomonadales	204457|Sphingomonadales	E	Belongs to the glutamate synthase family	-	-	-	-	-	-	-	-	-	-	-	-	Glu_synthase
SRD3_k127_3558355_11	1470591.BW41_01580	8.366e-31	124.0	2AKUF@1|root,31BMJ@2|Bacteria,1NZEW@1224|Proteobacteria,2USTE@28211|Alphaproteobacteria,2K5JD@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3558355_1	1112216.JH594425_gene319	2.195e-203	658.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TW2U@28211|Alphaproteobacteria,2KE9I@204457|Sphingomonadales	204457|Sphingomonadales	T	CHASE2	-	-	-	-	-	-	-	-	-	-	-	-	CHASE2,EAL
SRD3_k127_3558355_10	1248917.ANFX01000035_gene1923	5.747e-55	208.0	COG4254@1|root,COG4254@2|Bacteria,1MV4V@1224|Proteobacteria,2TV9X@28211|Alphaproteobacteria,2KET3@204457|Sphingomonadales	204457|Sphingomonadales	S	FecR protein	-	-	-	-	-	-	-	-	-	-	-	-	FecR
SRD3_k127_3558355_6	1123270.ATUR01000003_gene779	1.276e-112	383.0	COG2831@1|root,COG2831@2|Bacteria,1MWEC@1224|Proteobacteria,2U04Z@28211|Alphaproteobacteria,2K3M5@204457|Sphingomonadales	204457|Sphingomonadales	U	Haemolysin secretion/activation protein ShlB/FhaC/HecB	-	-	-	-	-	-	-	-	-	-	-	-	POTRA_2,ShlB
SRD3_k127_3558355_4	1112216.JH594425_gene1531	1.47e-147	477.0	COG3386@1|root,COG3386@2|Bacteria,1MU0C@1224|Proteobacteria,2TSXG@28211|Alphaproteobacteria,2K05D@204457|Sphingomonadales	204457|Sphingomonadales	G	Gluconolactonase	-	GO:0003674,GO:0003824,GO:0004341,GO:0016787,GO:0016788,GO:0052689	3.1.1.17	ko:K01053	ko00030,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00030,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220	M00129	R01519,R02933,R03751	RC00537,RC00983	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	SGL
SRD3_k127_3571891_2	1082931.KKY_1794	2.824e-81	275.0	COG0789@1|root,COG0789@2|Bacteria,1REB7@1224|Proteobacteria,2U7WY@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	TipAS antibiotic-recognition domain	-	-	-	-	-	-	-	-	-	-	-	-	MerR_1,TipAS
SRD3_k127_3571891_0	1112214.AHIS01000108_gene3970	0.0	1415.0	COG4206@1|root,COG4206@2|Bacteria,1R47X@1224|Proteobacteria,2TW6Q@28211|Alphaproteobacteria,2K1IJ@204457|Sphingomonadales	204457|Sphingomonadales	H	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SRD3_k127_3571891_1	228405.HNE_2526	4.733e-88	308.0	COG3209@1|root,COG3209@2|Bacteria,1MVV1@1224|Proteobacteria,2UBV3@28211|Alphaproteobacteria,43ZJX@69657|Hyphomonadaceae	28211|Alphaproteobacteria	M	COG3209 Rhs family protein	-	-	-	-	-	-	-	-	-	-	-	-	LysM,RHS_repeat
SRD3_k127_3598004_10	1030157.AFMP01000028_gene2263	8.668e-115	379.0	COG2987@1|root,COG2987@2|Bacteria,1MU4W@1224|Proteobacteria,2TSJR@28211|Alphaproteobacteria,2K2BT@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate	hutU	-	4.2.1.49	ko:K01712	ko00340,ko01100,map00340,map01100	M00045	R02914	RC00804	ko00000,ko00001,ko00002,ko01000	-	-	-	Urocanase,Urocanase_C,Urocanase_N
SRD3_k127_3598004_9	450851.PHZ_c0467	2.365e-126	408.0	COG3741@1|root,COG3741@2|Bacteria,1MY4D@1224|Proteobacteria,2TSC3@28211|Alphaproteobacteria,2KGIG@204458|Caulobacterales	204458|Caulobacterales	E	N-formylglutamate amidohydrolase	hutG	-	3.5.1.68,3.5.3.8	ko:K01458,ko:K01479	ko00340,ko00630,ko01100,map00340,map00630,map01100	M00045	R00525,R02285	RC00165,RC00221,RC00323,RC00681	ko00000,ko00001,ko00002,ko01000	-	-	-	FGase
SRD3_k127_3598004_3	1292034.OR37_04065	4.078e-258	803.0	COG2986@1|root,COG2986@2|Bacteria,1MU6K@1224|Proteobacteria,2TSPJ@28211|Alphaproteobacteria,2KF5U@204458|Caulobacterales	204458|Caulobacterales	E	Catalyzes the degradation of histidine to urocanate and ammmonia	hutH	-	4.3.1.3	ko:K01745	ko00340,ko01100,map00340,map01100	M00045	R01168	RC00361	ko00000,ko00001,ko00002,ko01000	-	-	-	Lyase_aromatic
SRD3_k127_3598004_4	13690.CP98_03787	1.783e-190	608.0	COG1228@1|root,COG1228@2|Bacteria,1MUYR@1224|Proteobacteria,2TSA1@28211|Alphaproteobacteria,2K2MP@204457|Sphingomonadales	204457|Sphingomonadales	Q	Catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway	hutI	-	3.5.2.7	ko:K01468	ko00340,ko01100,map00340,map01100	M00045	R02288	RC00683	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1,Amidohydro_3
SRD3_k127_3598004_5	1449049.JONW01000008_gene324	4.434e-186	591.0	COG0402@1|root,COG0402@2|Bacteria,1MUFE@1224|Proteobacteria,2TR3A@28211|Alphaproteobacteria,2KFQ7@204458|Caulobacterales	204458|Caulobacterales	F	Amidohydrolase family	hutF	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
SRD3_k127_3598004_16	1502850.FG91_03061	1.123e-72	258.0	COG2188@1|root,COG2188@2|Bacteria,1MVFM@1224|Proteobacteria,2U5HC@28211|Alphaproteobacteria,2K412@204457|Sphingomonadales	204457|Sphingomonadales	K	histidine utilization repressor	-	-	-	ko:K05836	-	-	-	-	ko00000,ko03000	-	-	-	GntR,UTRA
SRD3_k127_3598004_14	509190.Cseg_0301	2.314e-107	363.0	COG2353@1|root,COG3038@1|root,COG2353@2|Bacteria,COG3038@2|Bacteria,1MZ7X@1224|Proteobacteria,2UBYU@28211|Alphaproteobacteria,2KGI7@204458|Caulobacterales	204458|Caulobacterales	C	Belongs to the UPF0312 family	-	-	-	ko:K12262	-	-	-	-	ko00000	-	-	-	Ni_hydr_CYTB,YceI
SRD3_k127_3598004_0	1112212.JH584235_gene1587	2.83e-305	955.0	COG4773@1|root,COG4773@2|Bacteria,1QWF0@1224|Proteobacteria,2TWXQ@28211|Alphaproteobacteria,2K0PU@204457|Sphingomonadales	204457|Sphingomonadales	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SRD3_k127_3598004_13	1112212.JH584235_gene1588	1.051e-109	363.0	COG3712@1|root,COG3712@2|Bacteria,1RJVJ@1224|Proteobacteria,2U9Q3@28211|Alphaproteobacteria,2K4P9@204457|Sphingomonadales	204457|Sphingomonadales	PT	Fe2 -dicitrate sensor, membrane component	-	-	-	ko:K07165	-	-	-	-	ko00000	-	-	-	DUF4880,FecR
SRD3_k127_3598004_17	1112216.JH594425_gene2817	1.089e-66	232.0	COG1595@1|root,COG1595@2|Bacteria,1N3PK@1224|Proteobacteria,2UE6P@28211|Alphaproteobacteria,2K3VW@204457|Sphingomonadales	204457|Sphingomonadales	K	Sigma-70, region 4	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
SRD3_k127_3598004_15	1090320.KB900605_gene2903	3.436e-104	346.0	COG3394@1|root,COG3394@2|Bacteria,1MX3P@1224|Proteobacteria,2TV3U@28211|Alphaproteobacteria,2K32H@204457|Sphingomonadales	204457|Sphingomonadales	G	YdjC-like protein	-	-	3.5.1.105	ko:K03478	-	-	-	-	ko00000,ko01000	-	-	-	YdjC
SRD3_k127_3598004_12	1112212.JH584235_gene1590	2.955e-110	364.0	COG1215@1|root,COG1215@2|Bacteria,1R6C4@1224|Proteobacteria,2UAG0@28211|Alphaproteobacteria,2K0HN@204457|Sphingomonadales	204457|Sphingomonadales	M	Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
SRD3_k127_3598004_6	1112216.JH594425_gene1250	6.133e-185	591.0	COG1807@1|root,COG1807@2|Bacteria,1NNG9@1224|Proteobacteria,2UMUM@28211|Alphaproteobacteria,2JZWB@204457|Sphingomonadales	204457|Sphingomonadales	M	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family	-	-	-	-	-	-	-	-	-	-	-	-	PMT_2
SRD3_k127_3598004_20	402881.Plav_1125	1.62e-35	143.0	COG1309@1|root,COG1309@2|Bacteria,1N208@1224|Proteobacteria,2UDE9@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SRD3_k127_3598004_1	1112212.JH584235_gene1831	1.308e-289	895.0	COG3119@1|root,COG3119@2|Bacteria,1MUJH@1224|Proteobacteria,2TSB8@28211|Alphaproteobacteria,2K365@204457|Sphingomonadales	204457|Sphingomonadales	P	Sulfatase	-	-	-	-	-	-	-	-	-	-	-	-	Sulfatase
SRD3_k127_3598004_19	1248916.ANFY01000004_gene1726	6.638e-36	140.0	2C0YA@1|root,3437Q@2|Bacteria,1NIVD@1224|Proteobacteria,2UKNB@28211|Alphaproteobacteria,2K6ZT@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4345
SRD3_k127_3598004_8	1112212.JH584235_gene2540	5.065e-144	465.0	COG1234@1|root,COG1234@2|Bacteria,1R64Z@1224|Proteobacteria,2U0BA@28211|Alphaproteobacteria,2K2ZH@204457|Sphingomonadales	204457|Sphingomonadales	S	Beta-lactamase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_2
SRD3_k127_3598004_2	1112212.JH584235_gene2541	2.428e-265	828.0	COG3119@1|root,COG3119@2|Bacteria,1MV92@1224|Proteobacteria,2TTXG@28211|Alphaproteobacteria,2K1IU@204457|Sphingomonadales	204457|Sphingomonadales	P	Arylsulfatase	-	-	3.1.6.1	ko:K01130	ko00140,ko00600,map00140,map00600	-	R03980,R04856	RC00128,RC00231	ko00000,ko00001,ko01000	-	-	-	Sulfatase
SRD3_k127_3598004_11	1112212.JH584235_gene1829	5.017e-113	368.0	COG3917@1|root,COG3917@2|Bacteria,1MV6E@1224|Proteobacteria,2TVJ4@28211|Alphaproteobacteria,2K0YH@204457|Sphingomonadales	204457|Sphingomonadales	Q	2-hydroxychromene-2-carboxylate isomerase	-	-	-	-	-	-	-	-	-	-	-	-	DSBA
SRD3_k127_3598004_18	1112212.JH584235_gene1828	3.286e-60	211.0	COG5470@1|root,COG5470@2|Bacteria,1MWI7@1224|Proteobacteria,2U0S6@28211|Alphaproteobacteria,2K5QS@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF1330)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1330
SRD3_k127_3598004_7	1112212.JH584235_gene1827	1.89e-147	469.0	COG0596@1|root,COG0596@2|Bacteria,1MUSF@1224|Proteobacteria,2TSK5@28211|Alphaproteobacteria,2K0B4@204457|Sphingomonadales	204457|Sphingomonadales	S	Serine aminopeptidase, S33	dhmA	-	3.8.1.5	ko:K01563	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	-	R05284,R05367,R05368,R05369,R05370,R07669,R07670	RC01317,RC01340,RC01341,RC02013	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1
SRD3_k127_3632389_8	702113.PP1Y_AT11717	9.382e-38	153.0	COG0477@1|root,COG2814@2|Bacteria,1MVQQ@1224|Proteobacteria,2TRBF@28211|Alphaproteobacteria,2K261@204457|Sphingomonadales	204457|Sphingomonadales	EGP	Major Facilitator	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SRD3_k127_3632389_6	279238.Saro_2810	7.124e-94	316.0	28JPA@1|root,2Z9FC@2|Bacteria,1PN1F@1224|Proteobacteria,2TSKX@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3632389_0	1192759.AKIB01000026_gene2167	0.0	1244.0	COG4774@1|root,COG4774@2|Bacteria,1NSA5@1224|Proteobacteria,2UNVI@28211|Alphaproteobacteria,2K93P@204457|Sphingomonadales	204457|Sphingomonadales	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SRD3_k127_3632389_4	1192759.AKIB01000026_gene2166	1.217e-145	471.0	COG0625@1|root,COG0625@2|Bacteria,1R6UY@1224|Proteobacteria,2UPFV@28211|Alphaproteobacteria,2K9KE@204457|Sphingomonadales	204457|Sphingomonadales	O	Glutathione S-transferase, C-terminal domain	-	-	-	ko:K11209	-	-	-	-	ko00000,ko01000	-	-	-	GST_C,GST_N_3
SRD3_k127_3632389_5	1192759.AKIB01000026_gene2165	4.162e-114	377.0	COG0625@1|root,COG0625@2|Bacteria,1NR5A@1224|Proteobacteria,2UQVF@28211|Alphaproteobacteria,2K9J6@204457|Sphingomonadales	204457|Sphingomonadales	O	Glutathione S-transferase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	GST_C
SRD3_k127_3632389_2	1192759.AKIB01000026_gene2164	3.187e-250	782.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,2K9V9@204457|Sphingomonadales	204457|Sphingomonadales	IQ	AMP-binding enzyme C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C
SRD3_k127_3632389_1	279238.Saro_2870	0.0	1093.0	COG2010@1|root,COG4993@1|root,COG2010@2|Bacteria,COG4993@2|Bacteria,1MUQX@1224|Proteobacteria,2TS2Q@28211|Alphaproteobacteria,2K18E@204457|Sphingomonadales	204457|Sphingomonadales	CG	Dehydrogenase	-	-	1.1.9.1,1.17.2.2	ko:K17760,ko:K21676	-	-	-	-	ko00000,ko01000	-	-	-	Cytochrome_CBB3,PQQ,PQQ_2
SRD3_k127_3632389_3	1192759.AKIB01000026_gene2162	8.431e-172	557.0	COG2159@1|root,COG2159@2|Bacteria,1MUUR@1224|Proteobacteria,2TSQB@28211|Alphaproteobacteria,2K2FP@204457|Sphingomonadales	204457|Sphingomonadales	S	Amidohydrolase	-	-	-	ko:K07045	-	-	-	-	ko00000	-	-	-	Amidohydro_2
SRD3_k127_3632389_7	279238.Saro_2865	1.852e-70	242.0	COG0625@1|root,COG0625@2|Bacteria,1R6UY@1224|Proteobacteria,2U1WS@28211|Alphaproteobacteria	28211|Alphaproteobacteria	O	Glutathione S-transferase, C-terminal domain	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_2,GST_N,GST_N_3
SRD3_k127_3638165_18	1112212.JH584235_gene1712	2.114e-07	52.0	COG0177@1|root,COG0177@2|Bacteria,1MUYQ@1224|Proteobacteria,2TRI2@28211|Alphaproteobacteria,2K0EP@204457|Sphingomonadales	204457|Sphingomonadales	L	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate	nth	-	4.2.99.18	ko:K10773	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	EndIII_4Fe-2S,HhH-GPD
SRD3_k127_3638165_9	1112216.JH594425_gene1237	5.725e-116	385.0	COG0289@1|root,COG0289@2|Bacteria,1MUCT@1224|Proteobacteria,2TSFJ@28211|Alphaproteobacteria,2K2CC@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate	dapB	-	1.17.1.8	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R04198,R04199	RC00478	ko00000,ko00001,ko00002,ko01000	-	-	-	DapB_C,DapB_N
SRD3_k127_3638165_13	1370122.JHXQ01000003_gene1372	4.87e-79	289.0	COG4625@1|root,COG4625@2|Bacteria	2|Bacteria	T	pathogenesis	CP_1076	-	-	-	-	-	-	-	-	-	-	-	Autotransporter
SRD3_k127_3638165_8	1449076.JOOE01000004_gene19	2.423e-118	384.0	COG0846@1|root,COG0846@2|Bacteria,1MUK1@1224|Proteobacteria,2TV1Q@28211|Alphaproteobacteria,2K1HB@204457|Sphingomonadales	204457|Sphingomonadales	K	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form	cobB	-	-	ko:K12410	-	-	-	-	ko00000,ko01000	-	-	-	SIR2
SRD3_k127_3638165_4	1112212.JH584235_gene1707	8.47e-166	526.0	COG1159@1|root,COG1159@2|Bacteria,1MUKT@1224|Proteobacteria,2TSHM@28211|Alphaproteobacteria,2K01W@204457|Sphingomonadales	204457|Sphingomonadales	S	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism	era	-	-	ko:K03595	-	-	-	-	ko00000,ko03009,ko03029	-	-	-	KH_2,MMR_HSR1
SRD3_k127_3638165_12	1112212.JH584235_gene1706	1.49e-109	361.0	COG0571@1|root,COG0571@2|Bacteria,1MUQ6@1224|Proteobacteria,2TTIA@28211|Alphaproteobacteria,2K1G1@204457|Sphingomonadales	204457|Sphingomonadales	J	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism	rnc	-	3.1.26.3	ko:K03685	ko03008,ko05205,map03008,map05205	-	-	-	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	-	-	-	Ribonucleas_3_3,dsrm
SRD3_k127_3638165_6	1112216.JH594425_gene596	5.139e-139	447.0	COG0681@1|root,COG0681@2|Bacteria,1MXUF@1224|Proteobacteria,2TR9N@28211|Alphaproteobacteria,2K1QM@204457|Sphingomonadales	204457|Sphingomonadales	U	Belongs to the peptidase S26 family	-	-	3.4.21.89	ko:K03100	ko02024,ko03060,map02024,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S24
SRD3_k127_3638165_1	1112216.JH594425_gene595	4.798e-275	851.0	COG0166@1|root,COG0166@2|Bacteria,1MUFP@1224|Proteobacteria,2TQKP@28211|Alphaproteobacteria,2K0KU@204457|Sphingomonadales	204457|Sphingomonadales	G	Belongs to the GPI family	pgi	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	5.3.1.9	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	M00001,M00004,M00114	R02739,R02740,R03321	RC00376,RC00563	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	PGI
SRD3_k127_3638165_2	1549858.MC45_11205	1.044e-228	714.0	COG1249@1|root,COG1249@2|Bacteria,1MU2Z@1224|Proteobacteria,2TQS7@28211|Alphaproteobacteria,2K11W@204457|Sphingomonadales	204457|Sphingomonadales	C	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family	gor	-	1.8.1.7	ko:K00383	ko00480,ko04918,map00480,map04918	-	R00094,R00115	RC00011	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2,Pyr_redox_dim
SRD3_k127_3638165_7	1379701.JPJC01000263_gene2294	7.758e-120	395.0	COG3180@1|root,COG3180@2|Bacteria,1MUFS@1224|Proteobacteria,2TUUX@28211|Alphaproteobacteria,2K5P9@204457|Sphingomonadales	204457|Sphingomonadales	S	TIGRFAM membrane protein AbrB duplication	-	-	-	ko:K07120	-	-	-	-	ko00000	-	-	-	AbrB
SRD3_k127_3638165_14	443598.AUFA01000048_gene896	2.532e-55	202.0	COG0625@1|root,COG0625@2|Bacteria,1RC4Y@1224|Proteobacteria,2U6JK@28211|Alphaproteobacteria,3JVU5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, C-terminal domain	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_2,GST_N,GST_N_3
SRD3_k127_3638165_15	1121946.AUAX01000011_gene3993	1.614e-42	165.0	COG3832@1|root,COG3832@2|Bacteria,2IG6F@201174|Actinobacteria,4DDVZ@85008|Micromonosporales	201174|Actinobacteria	S	PFAM Activator of Hsp90 ATPase 1 family protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
SRD3_k127_3638165_16	1440774.Y900_017030	4.647e-32	128.0	COG0640@1|root,COG0640@2|Bacteria,2IR66@201174|Actinobacteria,23AX1@1762|Mycobacteriaceae	201174|Actinobacteria	K	arsR family	-	GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043254,GO:0044087,GO:0044212,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0090034,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
SRD3_k127_3638165_0	1112214.AHIS01000049_gene2348	0.0	1205.0	COG0365@1|root,COG0365@2|Bacteria,1MUF5@1224|Proteobacteria,2TRKS@28211|Alphaproteobacteria,2K0M5@204457|Sphingomonadales	204457|Sphingomonadales	I	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA	-	-	-	-	-	-	-	-	-	-	-	-	ACAS_N,AMP-binding,AMP-binding_C
SRD3_k127_3638165_5	1112214.AHIS01000049_gene2349	3.815e-157	501.0	COG0451@1|root,COG0451@2|Bacteria,1MW32@1224|Proteobacteria,2TTTU@28211|Alphaproteobacteria,2K2VI@204457|Sphingomonadales	204457|Sphingomonadales	GM	NAD(P)H-binding	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase
SRD3_k127_3638165_17	861299.J421_1187	9.482e-23	102.0	293XY@1|root,2ZRCZ@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3638165_11	279238.Saro_0865	1.464e-110	366.0	COG4341@1|root,COG4341@2|Bacteria,1RAX5@1224|Proteobacteria,2U5RV@28211|Alphaproteobacteria,2KAD4@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3638165_3	1090319.KE386571_gene3233	3.479e-193	612.0	COG1396@1|root,COG3800@1|root,COG1396@2|Bacteria,COG3800@2|Bacteria,1MU50@1224|Proteobacteria,2TRKE@28211|Alphaproteobacteria,2K18F@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	-	-	-	ko:K21686	-	-	-	-	ko00000,ko03000	-	-	-	DUF2083,HTH_3,HTH_31,Peptidase_M78
SRD3_k127_3638165_10	1112216.JH594425_gene591	3.935e-111	362.0	COG4799@1|root,COG4799@2|Bacteria,1MVAX@1224|Proteobacteria,2TRI1@28211|Alphaproteobacteria,2K0V7@204457|Sphingomonadales	204457|Sphingomonadales	I	acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)	pccB	-	2.1.3.15,6.4.1.3	ko:K01966	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	M00373,M00741	R01859	RC00097,RC00609	ko00000,ko00001,ko00002,ko01000	-	-	-	Carboxyl_trans
SRD3_k127_3657384_2	1112214.AHIS01000047_gene1986	5.957e-104	355.0	COG2802@1|root,COG2802@2|Bacteria,1NV9N@1224|Proteobacteria,2TQZ4@28211|Alphaproteobacteria,2K0QK@204457|Sphingomonadales	204457|Sphingomonadales	S	to the N-terminal domain of Lon protease	-	-	-	ko:K07157	-	-	-	-	ko00000	-	-	-	LON_substr_bdg
SRD3_k127_3657384_1	1112214.AHIS01000047_gene1987	1.48e-152	486.0	COG3118@1|root,COG3118@2|Bacteria,1MV0R@1224|Proteobacteria,2TS5X@28211|Alphaproteobacteria,2K0HB@204457|Sphingomonadales	204457|Sphingomonadales	O	Thioredoxin	-	-	-	ko:K05838	-	-	-	-	ko00000,ko03110	-	-	-	TPR_15,TPR_19,TPR_20,Thioredoxin
SRD3_k127_3657384_0	1449049.JONW01000005_gene991	8.312e-260	835.0	COG0612@1|root,COG0612@2|Bacteria,1NAH6@1224|Proteobacteria,2U0S5@28211|Alphaproteobacteria,2KFX1@204458|Caulobacterales	204458|Caulobacterales	S	Belongs to the peptidase M16 family	-	-	-	ko:K07263	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M16,Peptidase_M16_C
SRD3_k127_3657384_3	1449049.JONW01000005_gene990	1.756e-78	286.0	COG0457@1|root,COG0457@2|Bacteria,1MVMG@1224|Proteobacteria,2TRVB@28211|Alphaproteobacteria,2KGDG@204458|Caulobacterales	204458|Caulobacterales	O	Glycosyl transferase family 41	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_41,TPR_1,TPR_16,TPR_19,TPR_2,TPR_8
SRD3_k127_3657384_4	1410620.SHLA_35c000160	8.131e-16	77.0	COG0350@1|root,COG0350@2|Bacteria,1MVF7@1224|Proteobacteria,2TV5U@28211|Alphaproteobacteria,4B9VJ@82115|Rhizobiaceae	28211|Alphaproteobacteria	L	Cysteine methyltransferase	ogt	-	2.1.1.63	ko:K00567	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DNA_binding_1
SRD3_k127_3688623_2	1112212.JH584235_gene514	5.82e-46	167.0	COG0776@1|root,COG0776@2|Bacteria,1MZ7M@1224|Proteobacteria,2UBR5@28211|Alphaproteobacteria,2K633@204457|Sphingomonadales	204457|Sphingomonadales	K	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control	ihfB	-	-	ko:K05788	-	-	-	-	ko00000,ko03032,ko03036,ko03400	-	-	-	Bac_DNA_binding
SRD3_k127_3688623_4	1429916.X566_02970	6.533e-08	59.0	COG1960@1|root,COG1960@2|Bacteria,1MU2V@1224|Proteobacteria,2TSK3@28211|Alphaproteobacteria,3JVKG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SRD3_k127_3688623_1	1346791.M529_19615	3.552e-109	375.0	COG0457@1|root,COG0457@2|Bacteria,1N06S@1224|Proteobacteria,2TQVV@28211|Alphaproteobacteria,2K2KZ@204457|Sphingomonadales	204457|Sphingomonadales	S	MTH538 TIR-like domain (DUF1863)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1863
SRD3_k127_3688623_3	1030157.AFMP01000059_gene2848	1.293e-14	77.0	2BF5U@1|root,328Y7@2|Bacteria,1P5YW@1224|Proteobacteria,2UX45@28211|Alphaproteobacteria,2K8C7@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3688623_0	1030157.AFMP01000059_gene2847	7.221e-148	474.0	COG1696@1|root,COG1696@2|Bacteria,1MUXN@1224|Proteobacteria,2TRD1@28211|Alphaproteobacteria,2K0G7@204457|Sphingomonadales	204457|Sphingomonadales	M	Membrane bound O-acyl transferase, MBOAT family protein	-	-	-	-	-	-	-	-	-	-	-	-	MBOAT
SRD3_k127_368900_4	1112212.JH584235_gene1691	7.98e-147	473.0	COG3182@1|root,COG3182@2|Bacteria,1MXGY@1224|Proteobacteria,2U8QA@28211|Alphaproteobacteria,2K14J@204457|Sphingomonadales	204457|Sphingomonadales	S	PepSY-associated TM region	-	-	-	-	-	-	-	-	-	-	-	-	PepSY_TM
SRD3_k127_368900_6	745310.G432_11150	1.042e-116	385.0	COG3128@1|root,COG3128@2|Bacteria,1MUI7@1224|Proteobacteria,2TRH2@28211|Alphaproteobacteria,2JZZU@204457|Sphingomonadales	204457|Sphingomonadales	S	PKHD-type hydroxylase	-	-	-	ko:K07336	-	-	-	-	ko00000,ko01000	-	-	-	2OG-FeII_Oxy_3
SRD3_k127_368900_7	1112214.AHIS01000049_gene2354	4.638e-115	389.0	COG0790@1|root,COG0790@2|Bacteria,1RCJU@1224|Proteobacteria,2USFF@28211|Alphaproteobacteria,2K1DR@204457|Sphingomonadales	204457|Sphingomonadales	S	Sel1-like repeats.	-	-	-	ko:K07126	-	-	-	-	ko00000	-	-	-	Sel1
SRD3_k127_368900_0	1112216.JH594425_gene586	0.0	1230.0	COG4774@1|root,COG4774@2|Bacteria,1MV0X@1224|Proteobacteria,2TTQD@28211|Alphaproteobacteria,2JZZI@204457|Sphingomonadales	204457|Sphingomonadales	P	receptor	-	-	-	ko:K16090	-	-	-	-	ko00000,ko02000	1.B.14.1.11	-	-	Plug,TonB_dep_Rec
SRD3_k127_368900_18	1112214.AHIS01000049_gene2352	5.088e-32	128.0	COG4321@1|root,COG4321@2|Bacteria,1PSCA@1224|Proteobacteria,2VA8Q@28211|Alphaproteobacteria,2K6W1@204457|Sphingomonadales	204457|Sphingomonadales	S	protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis	-	-	-	-	-	-	-	-	-	-	-	-	RHH_4
SRD3_k127_368900_1	1112214.AHIS01000049_gene2350	0.0	1040.0	COG4547@1|root,COG4547@2|Bacteria,1MX11@1224|Proteobacteria,2TS4N@28211|Alphaproteobacteria,2JZUK@204457|Sphingomonadales	204457|Sphingomonadales	H	Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide 5, 6-dimethylbenzimidazole phosphoribosyltransferase)	-	-	6.6.1.2	ko:K09883	ko00860,ko01100,map00860,map01100	-	R05227	RC02000	ko00000,ko00001,ko01000	-	-	-	CobT,CobT_C
SRD3_k127_368900_2	1379701.JPJC01000226_gene1996	2.943e-211	659.0	COG0714@1|root,COG0714@2|Bacteria,1MXIW@1224|Proteobacteria,2TS1Z@28211|Alphaproteobacteria,2K0S6@204457|Sphingomonadales	204457|Sphingomonadales	S	Aerobic cobaltochelatase subunit CobS	-	-	6.6.1.2	ko:K09882	ko00860,ko01100,map00860,map01100	-	R05227	RC02000	ko00000,ko00001,ko01000	-	-	-	AAA_5,CbbQ_C,CobS_N
SRD3_k127_368900_11	1123269.NX02_25800	7.039e-97	321.0	COG1733@1|root,COG1733@2|Bacteria,1R6MK@1224|Proteobacteria,2U2KM@28211|Alphaproteobacteria,2K4SU@204457|Sphingomonadales	204457|Sphingomonadales	K	HxlR-like helix-turn-helix	-	-	-	-	-	-	-	-	-	-	-	-	Alkyl_sulf_C,HxlR,SCP2
SRD3_k127_368900_15	1123269.NX02_25795	4.448e-55	197.0	COG3607@1|root,COG3607@2|Bacteria,1RH1T@1224|Proteobacteria,2U7DZ@28211|Alphaproteobacteria,2K69I@204457|Sphingomonadales	204457|Sphingomonadales	S	Lactoylglutathione lyase	-	-	-	ko:K07032	-	-	-	-	ko00000	-	-	-	Glyoxalase
SRD3_k127_368900_16	448385.sce5414	8.162e-50	180.0	COG5507@1|root,COG5507@2|Bacteria,1RHC1@1224|Proteobacteria,434JI@68525|delta/epsilon subdivisions,2X8X5@28221|Deltaproteobacteria,2Z0TK@29|Myxococcales	28221|Deltaproteobacteria	S	Protein of unknown function (DUF1428)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1428
SRD3_k127_368900_5	1112214.AHIS01000011_gene207	1.176e-117	383.0	COG3324@1|root,COG3324@2|Bacteria,1R81W@1224|Proteobacteria,2U6BE@28211|Alphaproteobacteria,2K4NC@204457|Sphingomonadales	204457|Sphingomonadales	S	enzyme related to lactoylglutathione lyase	-	-	-	ko:K06996	-	-	-	-	ko00000	-	-	-	Glyoxalase
SRD3_k127_368900_13	158500.BV97_01483	6.338e-77	259.0	COG3865@1|root,COG3865@2|Bacteria,1N7IY@1224|Proteobacteria,2U993@28211|Alphaproteobacteria,2K5JQ@204457|Sphingomonadales	204457|Sphingomonadales	S	3-demethylubiquinone-9 3-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	3-dmu-9_3-mt
SRD3_k127_368900_12	1449076.JOOE01000005_gene1598	2.964e-79	276.0	COG0262@1|root,COG0262@2|Bacteria,1R5UU@1224|Proteobacteria,2U45H@28211|Alphaproteobacteria,2K40M@204457|Sphingomonadales	204457|Sphingomonadales	H	RibD C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	RibD_C
SRD3_k127_368900_9	1112214.AHIS01000011_gene204	3.312e-100	329.0	COG2214@1|root,COG2214@2|Bacteria,1MXTG@1224|Proteobacteria,2TRZH@28211|Alphaproteobacteria,2K4VC@204457|Sphingomonadales	204457|Sphingomonadales	O	molecular chaperone	-	-	-	-	-	-	-	-	-	-	-	-	DnaJ
SRD3_k127_368900_17	1549858.MC45_09585	5.864e-33	133.0	COG0271@1|root,COG0271@2|Bacteria,1MZG5@1224|Proteobacteria,2UF6U@28211|Alphaproteobacteria,2K60E@204457|Sphingomonadales	204457|Sphingomonadales	T	Belongs to the BolA IbaG family	-	-	-	ko:K05527	-	-	-	-	ko00000,ko03000	-	-	-	BolA
SRD3_k127_368900_8	1379701.JPJC01000226_gene2006	1.519e-109	359.0	COG0625@1|root,COG0625@2|Bacteria,1N8XH@1224|Proteobacteria,2TTHQ@28211|Alphaproteobacteria,2K1AK@204457|Sphingomonadales	204457|Sphingomonadales	O	Glutathione S-transferase	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C_3
SRD3_k127_368900_14	1081640.AGFU01000026_gene2657	1.173e-65	233.0	COG1051@1|root,COG1051@2|Bacteria,1RH1H@1224|Proteobacteria,2UDQ3@28211|Alphaproteobacteria,2K4MF@204457|Sphingomonadales	204457|Sphingomonadales	F	Belongs to the Nudix hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
SRD3_k127_368900_3	1449076.JOOE01000005_gene1594	3.622e-167	529.0	COG1741@1|root,COG1741@2|Bacteria,1MWIP@1224|Proteobacteria,2TRHR@28211|Alphaproteobacteria,2K10E@204457|Sphingomonadales	204457|Sphingomonadales	L	Belongs to the pirin family	-	-	-	ko:K06911	-	-	-	-	ko00000	-	-	-	Pirin,Pirin_C
SRD3_k127_368900_10	1112216.JH594425_gene1871	1.686e-99	328.0	COG0596@1|root,COG0596@2|Bacteria,1R84S@1224|Proteobacteria,2U3BW@28211|Alphaproteobacteria,2K12U@204457|Sphingomonadales	204457|Sphingomonadales	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
SRD3_k127_3712764_3	1112212.JH584235_gene413	2.824e-144	460.0	COG1028@1|root,COG1028@2|Bacteria,1MWGC@1224|Proteobacteria,2TSNX@28211|Alphaproteobacteria,2K2M6@204457|Sphingomonadales	204457|Sphingomonadales	IQ	Short-chain dehydrogenase reductase sdr	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SRD3_k127_3712764_4	1112216.JH594425_gene2711	3.045e-142	454.0	COG1028@1|root,COG1028@2|Bacteria,1MU3W@1224|Proteobacteria,2TT5X@28211|Alphaproteobacteria,2K05I@204457|Sphingomonadales	204457|Sphingomonadales	IQ	Short-chain dehydrogenase reductase sdr	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SRD3_k127_3712764_6	1470591.BW41_02594	0.0005081	44.0	COG4795@1|root,COG4795@2|Bacteria,1RJAE@1224|Proteobacteria,2UAXM@28211|Alphaproteobacteria,2K56Q@204457|Sphingomonadales	204457|Sphingomonadales	U	General secretion pathway protein	gspJ	-	-	ko:K02459	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	N_methyl,T2SSJ
SRD3_k127_3712764_5	1122931.AUAE01000030_gene844	0.0004975	47.0	2D9RK@1|root,32TTT@2|Bacteria,4P5WK@976|Bacteroidetes,2FUHT@200643|Bacteroidia	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3712764_2	1379701.JPJC01000212_gene1953	1.917e-150	481.0	COG1946@1|root,COG1946@2|Bacteria,1MV9R@1224|Proteobacteria,2TRFD@28211|Alphaproteobacteria,2K289@204457|Sphingomonadales	204457|Sphingomonadales	I	Acyl-CoA thioesterase	-	-	-	ko:K10805	ko01040,map01040	-	-	-	ko00000,ko00001,ko01000,ko01004	-	-	-	4HBT_3
SRD3_k127_3712764_1	1112216.JH594425_gene2713	3.949e-202	634.0	COG1960@1|root,COG1960@2|Bacteria,1MUBH@1224|Proteobacteria,2TVBB@28211|Alphaproteobacteria,2K1G8@204457|Sphingomonadales	204457|Sphingomonadales	I	Acyl-CoA dehydrogenase, N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SRD3_k127_3712764_0	1112216.JH594425_gene2714	5.959e-204	636.0	COG1960@1|root,COG1960@2|Bacteria,1MVJC@1224|Proteobacteria,2TUVB@28211|Alphaproteobacteria,2K0FU@204457|Sphingomonadales	204457|Sphingomonadales	I	Acyl-CoA dehydrogenase, middle domain	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SRD3_k127_3741997_3	1112212.JH584235_gene721	1.028e-130	418.0	COG0492@1|root,COG0492@2|Bacteria,1MV15@1224|Proteobacteria,2TRBW@28211|Alphaproteobacteria,2K0I2@204457|Sphingomonadales	204457|Sphingomonadales	C	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family	trxB	-	1.8.1.9	ko:K00384	ko00450,map00450	-	R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2
SRD3_k127_3741997_5	1112216.JH594425_gene2856	2.417e-91	307.0	COG1073@1|root,COG1073@2|Bacteria,1R61B@1224|Proteobacteria,2U45E@28211|Alphaproteobacteria,2K10H@204457|Sphingomonadales	204457|Sphingomonadales	S	TIGRFAM Hydrolase, ortholog 1, exosortase system type 1 associated	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6,Hydrolase_4
SRD3_k127_3741997_6	629773.AORY01000011_gene1813	2.025e-53	197.0	COG2267@1|root,COG2267@2|Bacteria,1RJMW@1224|Proteobacteria,2UB7N@28211|Alphaproteobacteria,2K5KA@204457|Sphingomonadales	204457|Sphingomonadales	I	carboxylic ester hydrolase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3741997_7	1112216.JH594425_gene2858	1.327e-35	137.0	COG0236@1|root,COG0236@2|Bacteria,1N83X@1224|Proteobacteria,2UFBF@28211|Alphaproteobacteria,2K6WR@204457|Sphingomonadales	204457|Sphingomonadales	IQ	acyl carrier protein	-	-	-	-	-	-	-	-	-	-	-	-	PP-binding
SRD3_k127_3741997_0	1112212.JH584235_gene717	7.382e-246	767.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TRP2@28211|Alphaproteobacteria,2K0DK@204457|Sphingomonadales	204457|Sphingomonadales	IQ	COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II	-	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C
SRD3_k127_3741997_1	1112214.AHIS01000084_gene3698	9.825e-190	600.0	COG0019@1|root,COG0019@2|Bacteria,1MUA6@1224|Proteobacteria,2TUK2@28211|Alphaproteobacteria,2K0RW@204457|Sphingomonadales	204457|Sphingomonadales	E	Belongs to the Orn Lys Arg decarboxylase class-II family	-	-	4.1.1.20	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R00451	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Orn_Arg_deC_N,Orn_DAP_Arg_deC
SRD3_k127_3741997_4	1112212.JH584235_gene715	7.018e-111	361.0	COG1596@1|root,COG1596@2|Bacteria,1RFBH@1224|Proteobacteria,2U835@28211|Alphaproteobacteria,2K15P@204457|Sphingomonadales	204457|Sphingomonadales	M	polysaccharide export	-	-	-	ko:K01991	ko02026,map02026	-	-	-	ko00000,ko00001,ko02000	1.B.18	-	-	Poly_export,SLBB
SRD3_k127_3741997_2	1112212.JH584235_gene714	9.032e-176	559.0	COG3206@1|root,COG3206@2|Bacteria,1MVBX@1224|Proteobacteria,2U1E2@28211|Alphaproteobacteria,2K08I@204457|Sphingomonadales	204457|Sphingomonadales	M	Chain-length determining protein	-	-	-	-	-	-	-	-	-	-	-	-	GNVR,Wzz
SRD3_k127_3805763_3	1449076.JOOE01000001_gene2636	2.452e-90	304.0	COG2833@1|root,COG2833@2|Bacteria,1MW0V@1224|Proteobacteria,2TQJU@28211|Alphaproteobacteria,2K2JV@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	DUF455
SRD3_k127_3805763_4	1112212.JH584235_gene1378	2.341e-75	258.0	COG1225@1|root,COG1225@2|Bacteria,1RD4R@1224|Proteobacteria,2U6Z9@28211|Alphaproteobacteria,2K4IB@204457|Sphingomonadales	204457|Sphingomonadales	O	Alkyl hydroperoxide reductase	bcp	-	1.11.1.15	ko:K03564	-	-	-	-	ko00000,ko01000	-	-	-	AhpC-TSA
SRD3_k127_3805763_0	1112212.JH584235_gene1379	0.0	1305.0	COG1391@1|root,COG1391@2|Bacteria,1MU4I@1224|Proteobacteria,2TRY7@28211|Alphaproteobacteria,2K1YP@204457|Sphingomonadales	204457|Sphingomonadales	H	Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell	glnE	-	2.7.7.42,2.7.7.89	ko:K00982	-	-	-	-	ko00000,ko01000	-	-	-	GlnD_UR_UTase,GlnE
SRD3_k127_3805763_2	1112212.JH584235_gene1381	6.654e-118	381.0	COG1595@1|root,COG1595@2|Bacteria,1MZMC@1224|Proteobacteria,2TUUZ@28211|Alphaproteobacteria,2K0TM@204457|Sphingomonadales	204457|Sphingomonadales	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
SRD3_k127_3805763_5	1219049.SP5_074_00220	1.344e-12	69.0	2APKU@1|root,31EQ3@2|Bacteria,1QC0Q@1224|Proteobacteria,2VEFJ@28211|Alphaproteobacteria,2K7SA@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3805763_1	1112214.AHIS01000031_gene1121	1.289e-149	475.0	COG0784@1|root,COG1595@1|root,COG0784@2|Bacteria,COG1595@2|Bacteria,1MX3Y@1224|Proteobacteria,2TT2R@28211|Alphaproteobacteria,2K0S1@204457|Sphingomonadales	204457|Sphingomonadales	T	In Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Sigma70_r4_2
SRD3_k127_3811374_6	1090320.KB900605_gene3081	2.87e-183	583.0	COG0635@1|root,COG0635@2|Bacteria,1MV1I@1224|Proteobacteria,2TRKT@28211|Alphaproteobacteria,2K1GX@204457|Sphingomonadales	204457|Sphingomonadales	H	Belongs to the anaerobic coproporphyrinogen-III oxidase family	hemN	-	-	-	-	-	-	-	-	-	-	-	Radical_SAM
SRD3_k127_3811374_15	1550073.JROH01000002_gene766	6.233e-94	321.0	COG3047@1|root,COG3047@2|Bacteria,1NUZJ@1224|Proteobacteria,2TRGI@28211|Alphaproteobacteria,2K2CV@204457|Sphingomonadales	204457|Sphingomonadales	M	OmpW family	-	-	-	ko:K07275	-	-	-	-	ko00000	-	-	-	OmpW
SRD3_k127_3811374_25	1112212.JH584235_gene1606	3.344e-19	89.0	COG3197@1|root,COG3197@2|Bacteria,1NG90@1224|Proteobacteria,2UJFJ@28211|Alphaproteobacteria,2K7T0@204457|Sphingomonadales	204457|Sphingomonadales	P	Cytochrome oxidase maturation protein cbb3-type	-	-	-	-	-	-	-	-	-	-	-	-	FixS
SRD3_k127_3811374_0	1112212.JH584235_gene1607	0.0	1103.0	COG2217@1|root,COG2217@2|Bacteria,1MU08@1224|Proteobacteria,2TR80@28211|Alphaproteobacteria,2K0EB@204457|Sphingomonadales	204457|Sphingomonadales	P	P-type ATPase	-	-	3.6.3.4	ko:K01533	-	-	R00086	RC00002	ko00000,ko01000	3.A.3.5	-	-	E1-E2_ATPase,HMA,Hydrolase
SRD3_k127_3811374_19	1112212.JH584235_gene1608	5.772e-76	257.0	COG5456@1|root,COG5456@2|Bacteria,1RHKI@1224|Proteobacteria,2U9GB@28211|Alphaproteobacteria,2K623@204457|Sphingomonadales	204457|Sphingomonadales	P	Integral membrane protein linked to a cation	-	-	-	-	-	-	-	-	-	-	-	-	FixH
SRD3_k127_3811374_2	1112212.JH584235_gene1609	3.096e-299	925.0	COG0348@1|root,COG0348@2|Bacteria,1MVFY@1224|Proteobacteria,2TRYB@28211|Alphaproteobacteria,2K0BY@204457|Sphingomonadales	204457|Sphingomonadales	C	Nitrogen fixation protein fixG	ccoG	-	-	-	-	-	-	-	-	-	-	-	Fer4_18,Fer4_5,FixG_C
SRD3_k127_3811374_7	1112212.JH584235_gene1610	1.289e-169	535.0	COG2010@1|root,COG2010@2|Bacteria,1MUCW@1224|Proteobacteria,2TQW1@28211|Alphaproteobacteria,2K23A@204457|Sphingomonadales	204457|Sphingomonadales	C	C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex	ccoP	-	-	ko:K00406	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00156	-	-	ko00000,ko00001,ko00002	3.D.4.3	-	-	Cytochrome_CBB3,FixP_N
SRD3_k127_3811374_26	1331060.RLDS_18025	2.651e-11	68.0	COG4736@1|root,COG4736@2|Bacteria,1NGV0@1224|Proteobacteria,2UJBS@28211|Alphaproteobacteria,2K7TM@204457|Sphingomonadales	204457|Sphingomonadales	O	Cbb3-type cytochrome oxidase component FixQ	-	-	-	ko:K00407	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00156	-	-	ko00000,ko00001,ko00002	3.D.4.3	-	-	FixQ
SRD3_k127_3811374_10	1112212.JH584235_gene1612	2.936e-150	476.0	COG2993@1|root,COG2993@2|Bacteria,1MXEY@1224|Proteobacteria,2TRGW@28211|Alphaproteobacteria,2K220@204457|Sphingomonadales	204457|Sphingomonadales	C	Peptidase S41	ccoO	-	-	ko:K00405	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00156	-	-	ko00000,ko00001,ko00002	3.D.4.3	-	-	FixO
SRD3_k127_3811374_1	1112212.JH584235_gene1613	0.0	1058.0	COG3278@1|root,COG3278@2|Bacteria,1MU18@1224|Proteobacteria,2TR2C@28211|Alphaproteobacteria,2K1TD@204457|Sphingomonadales	204457|Sphingomonadales	C	Belongs to the heme-copper respiratory oxidase family	ccoN	-	1.9.3.1	ko:K00404	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00156	-	-	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	COX1
SRD3_k127_3811374_16	1449076.JOOE01000001_gene2205	2.466e-92	317.0	COG4566@1|root,COG4566@2|Bacteria,1N6WR@1224|Proteobacteria,2TUND@28211|Alphaproteobacteria,2K16W@204457|Sphingomonadales	204457|Sphingomonadales	K	part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
SRD3_k127_3811374_4	1123269.NX02_09280	2.409e-226	711.0	COG4191@1|root,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TR8X@28211|Alphaproteobacteria,2K0ZS@204457|Sphingomonadales	204457|Sphingomonadales	T	nitrogen fixation sensor protein fixL	-	-	2.7.13.3	ko:K14986	ko02020,map02020	M00524	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	DUF4118,HATPase_c,HisKA,PAS
SRD3_k127_3811374_9	1112212.JH584235_gene1618	7.595e-165	529.0	COG2989@1|root,COG2989@2|Bacteria,1MV14@1224|Proteobacteria,2TRJ9@28211|Alphaproteobacteria,2K0KA@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	ko:K21470	-	-	-	-	ko00000,ko01002,ko01011	-	-	-	YkuD
SRD3_k127_3811374_14	1112212.JH584235_gene1619	3.88e-109	359.0	COG0589@1|root,COG0589@2|Bacteria,1QD8E@1224|Proteobacteria,2TRQ7@28211|Alphaproteobacteria,2K4W9@204457|Sphingomonadales	204457|Sphingomonadales	T	Belongs to the universal stress protein A family	-	-	-	-	-	-	-	-	-	-	-	-	Usp
SRD3_k127_3811374_23	46429.BV95_00602	5.552e-37	143.0	COG4566@1|root,COG4566@2|Bacteria,1NW4T@1224|Proteobacteria,2US4W@28211|Alphaproteobacteria,2K6TX@204457|Sphingomonadales	204457|Sphingomonadales	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
SRD3_k127_3811374_18	46429.BV95_00603	5.134e-90	304.0	COG4566@1|root,COG4566@2|Bacteria,1N6WR@1224|Proteobacteria,2TUND@28211|Alphaproteobacteria,2K16W@204457|Sphingomonadales	204457|Sphingomonadales	K	part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes	-	-	-	ko:K14987	ko02020,map02020	M00524	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	GerE,Response_reg
SRD3_k127_3811374_5	1007104.SUS17_1432	2.977e-188	603.0	COG4191@1|root,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TR8X@28211|Alphaproteobacteria,2K0ZS@204457|Sphingomonadales	204457|Sphingomonadales	T	nitrogen fixation sensor protein fixL	-	-	2.7.13.3	ko:K14986	ko02020,map02020	M00524	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA,PAS,PAS_9
SRD3_k127_3811374_22	685778.AORL01000021_gene924	2.897e-52	195.0	2FDTI@1|root,345U8@2|Bacteria,1NJ6F@1224|Proteobacteria,2V4SS@28211|Alphaproteobacteria,2K6Q3@204457|Sphingomonadales	204457|Sphingomonadales	S	Bacterial protein of unknown function (Gcw_chp)	-	-	-	-	-	-	-	-	-	-	-	-	Gcw_chp
SRD3_k127_3811374_27	1500893.JQNB01000001_gene2149	4.907e-10	72.0	2EIP2@1|root,33CEF@2|Bacteria,1QSUQ@1224|Proteobacteria,1RWF0@1236|Gammaproteobacteria,1X3GT@135614|Xanthomonadales	135614|Xanthomonadales	S	Uncharacterised nucleotidyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	NTP_transf_5
SRD3_k127_3811374_24	1449076.JOOE01000001_gene3024	8.091e-30	131.0	COG3794@1|root,COG3794@2|Bacteria,1PPV9@1224|Proteobacteria,2UH4U@28211|Alphaproteobacteria,2K7FU@204457|Sphingomonadales	204457|Sphingomonadales	C	PFAM blue (type 1) copper domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3811374_20	1449076.JOOE01000001_gene3025	6.399e-74	257.0	COG4122@1|root,COG4122@2|Bacteria	2|Bacteria	E	O-methyltransferase activity	-	-	-	ko:K05303	-	-	-	-	ko00000,ko01000	-	-	-	Methyltransf_24,TylF
SRD3_k127_3811374_8	1449076.JOOE01000001_gene3026	9.885e-167	537.0	2C8CD@1|root,2Z9AD@2|Bacteria,1N17D@1224|Proteobacteria,2URI7@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3811374_11	1449076.JOOE01000001_gene3027	2.057e-120	398.0	COG0402@1|root,COG0402@2|Bacteria,1R9S5@1224|Proteobacteria,2U10N@28211|Alphaproteobacteria	28211|Alphaproteobacteria	F	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
SRD3_k127_3811374_17	1449076.JOOE01000001_gene3028	7.784e-91	306.0	COG0500@1|root,COG2226@2|Bacteria,1PFQ1@1224|Proteobacteria,2U64J@28211|Alphaproteobacteria	28211|Alphaproteobacteria	Q	ubiE/COQ5 methyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
SRD3_k127_3811374_3	1449076.JOOE01000001_gene3029	8.634e-257	799.0	COG1032@1|root,COG1032@2|Bacteria,1MWR0@1224|Proteobacteria,2TRFJ@28211|Alphaproteobacteria,2K1JK@204457|Sphingomonadales	204457|Sphingomonadales	C	hopanoid biosynthesis associated radical SAM protein HpnJ	-	-	-	-	-	-	-	-	-	-	-	-	B12-binding,Radical_SAM
SRD3_k127_3811374_13	1449076.JOOE01000001_gene3030	1.515e-109	359.0	COG0500@1|root,COG2226@2|Bacteria,1PNZA@1224|Proteobacteria,2V1IN@28211|Alphaproteobacteria,2KBM8@204457|Sphingomonadales	204457|Sphingomonadales	Q	Methyltransferase small domain	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3811374_12	1449076.JOOE01000001_gene3031	8.664e-110	361.0	COG0500@1|root,COG2226@2|Bacteria,1R8N9@1224|Proteobacteria	1224|Proteobacteria	Q	methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25
SRD3_k127_3811374_21	1449076.JOOE01000001_gene3032	1.061e-57	202.0	COG1032@1|root,COG1032@2|Bacteria,1MWR0@1224|Proteobacteria,2TUPK@28211|Alphaproteobacteria,2KD0S@204457|Sphingomonadales	204457|Sphingomonadales	C	Elongator protein 3, MiaB family, Radical SAM	-	-	-	-	-	-	-	-	-	-	-	-	B12-binding,Radical_SAM
SRD3_k127_3819827_2	1112212.JH584235_gene946	1.293e-134	430.0	COG1192@1|root,COG1192@2|Bacteria,1MWH3@1224|Proteobacteria,2U100@28211|Alphaproteobacteria,2K0JR@204457|Sphingomonadales	204457|Sphingomonadales	D	involved in chromosome partitioning	-	-	-	ko:K03496	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	AAA_31
SRD3_k127_3819827_5	1112214.AHIS01000088_gene869	7.346e-42	165.0	2BWQA@1|root,2ZWJK@2|Bacteria,1N8MW@1224|Proteobacteria,2UGCR@28211|Alphaproteobacteria,2K66S@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3819827_3	1112214.AHIS01000088_gene870	8.131e-119	398.0	COG3087@1|root,COG5010@1|root,COG3087@2|Bacteria,COG5010@2|Bacteria,1RK9P@1224|Proteobacteria,2U5CI@28211|Alphaproteobacteria,2K119@204457|Sphingomonadales	204457|Sphingomonadales	U	Sporulation related domain	-	-	-	-	-	-	-	-	-	-	-	-	SPOR,TPR_16,TPR_19,TPR_4
SRD3_k127_3819827_1	1081640.AGFU01000009_gene1427	2.544e-176	565.0	COG0044@1|root,COG0044@2|Bacteria,1MVXY@1224|Proteobacteria,2TSTM@28211|Alphaproteobacteria,2K003@204457|Sphingomonadales	204457|Sphingomonadales	F	dihydroorotase	-	-	3.5.2.3	ko:K01465	ko00240,ko01100,map00240,map01100	M00051	R01993	RC00632	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1
SRD3_k127_3819827_0	1379701.JPJC01000012_gene160	2.101e-190	603.0	COG0540@1|root,COG0540@2|Bacteria,1MWAB@1224|Proteobacteria,2TRHP@28211|Alphaproteobacteria,2K0IH@204457|Sphingomonadales	204457|Sphingomonadales	F	Belongs to the ATCase OTCase family	pyrB	-	2.1.3.2	ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R01397	RC00064,RC02850	ko00000,ko00001,ko00002,ko01000	-	-	-	OTCace,OTCace_N
SRD3_k127_3819827_4	1123240.ATVO01000005_gene1920	2.994e-67	242.0	COG2207@1|root,COG2207@2|Bacteria,1RAXU@1224|Proteobacteria,2U682@28211|Alphaproteobacteria,2K33E@204457|Sphingomonadales	204457|Sphingomonadales	K	Helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
SRD3_k127_3819827_7	288000.BBta_3531	3.634e-41	157.0	COG3807@1|root,COG3807@2|Bacteria,1MXBF@1224|Proteobacteria,2TUSE@28211|Alphaproteobacteria,3JT6W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bacterial SH3 domain	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3819827_6	1123508.JH636454_gene5778	1.708e-41	160.0	COG2503@1|root,COG4639@1|root,COG2503@2|Bacteria,COG4639@2|Bacteria	2|Bacteria	Q	AAA domain	-	-	-	-	-	-	-	-	-	-	-	-	Acid_phosphat_B
SRD3_k127_3853896_2	1470591.BW41_01309	3.079e-93	314.0	COG1472@1|root,COG1472@2|Bacteria,1MVIV@1224|Proteobacteria,2TS28@28211|Alphaproteobacteria,2K11N@204457|Sphingomonadales	204457|Sphingomonadales	G	Glycosyl hydrolase family 3 C-terminal domain	-	-	3.2.1.21	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GH3	-	Glyco_hydro_3,Glyco_hydro_3_C
SRD3_k127_3853896_1	745310.G432_10935	9.635e-182	572.0	COG1609@1|root,COG1609@2|Bacteria,1MVUR@1224|Proteobacteria,2TRMS@28211|Alphaproteobacteria,2K12A@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	-	-	-	ko:K02529	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_3
SRD3_k127_3853896_0	1112216.JH594425_gene411	2.487e-208	661.0	2DBJC@1|root,2Z9K5@2|Bacteria,1Q6WE@1224|Proteobacteria,2VCZK@28211|Alphaproteobacteria,2K3G8@204457|Sphingomonadales	204457|Sphingomonadales	S	Glycosyl hydrolase family 47	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_47
SRD3_k127_3861479_6	1335760.ASTG01000031_gene1843	7.843e-12	67.0	COG0845@1|root,COG0845@2|Bacteria,1P540@1224|Proteobacteria,2U20J@28211|Alphaproteobacteria,2K2CE@204457|Sphingomonadales	204457|Sphingomonadales	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	-	-	-	-	-	-	-	-	-	HlyD_D23
SRD3_k127_3861479_2	1112216.JH594425_gene3003	9.231e-155	494.0	COG0470@1|root,COG0470@2|Bacteria,1MY1W@1224|Proteobacteria,2TV3E@28211|Alphaproteobacteria,2JZZA@204457|Sphingomonadales	204457|Sphingomonadales	L	DNA polymerase	holB	-	2.7.7.7	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta2
SRD3_k127_3861479_3	1112214.AHIS01000094_gene549	1.654e-98	327.0	COG0125@1|root,COG0125@2|Bacteria,1MV9C@1224|Proteobacteria,2U72D@28211|Alphaproteobacteria,2K3VU@204457|Sphingomonadales	204457|Sphingomonadales	F	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis	tmk	-	2.7.4.9	ko:K00943	ko00240,ko01100,map00240,map01100	M00053	R02094,R02098	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	Thymidylate_kin
SRD3_k127_3861479_0	1470591.BW41_03781	3.854e-199	625.0	COG1686@1|root,COG1686@2|Bacteria,1MUU7@1224|Proteobacteria,2TS1P@28211|Alphaproteobacteria,2K17Y@204457|Sphingomonadales	204457|Sphingomonadales	M	Belongs to the peptidase S11 family	dac	-	3.4.16.4	ko:K07258	ko00550,ko01100,map00550,map01100	-	-	-	ko00000,ko00001,ko01000,ko01002,ko01011	-	-	-	PBP5_C,Peptidase_S11
SRD3_k127_3861479_4	1112212.JH584235_gene567	2.935e-61	223.0	COG0797@1|root,COG0797@2|Bacteria,1MZ8S@1224|Proteobacteria,2TUER@28211|Alphaproteobacteria,2K4AD@204457|Sphingomonadales	204457|Sphingomonadales	M	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides	rlpA	-	-	ko:K03642	-	-	-	-	ko00000	-	-	-	DPBB_1,SPOR
SRD3_k127_3861479_1	1112214.AHIS01000094_gene546	4.398e-184	582.0	COG2951@1|root,COG2951@2|Bacteria,1MUZ3@1224|Proteobacteria,2TRP0@28211|Alphaproteobacteria,2K0TV@204457|Sphingomonadales	204457|Sphingomonadales	M	Lytic murein transglycosylase	mltB	-	-	-	-	-	-	-	-	-	-	-	SLT_2
SRD3_k127_3865972_2	324602.Caur_3617	1.874e-09	68.0	COG1266@1|root,COG1266@2|Bacteria	2|Bacteria	V	CAAX protease self-immunity	-	-	-	ko:K07052	-	-	-	-	ko00000	-	-	-	Abi
SRD3_k127_3865972_0	1254432.SCE1572_39135	9.889e-113	368.0	COG1794@1|root,COG1794@2|Bacteria,1PRP1@1224|Proteobacteria,43DME@68525|delta/epsilon subdivisions,2WZYC@28221|Deltaproteobacteria,2Z2CP@29|Myxococcales	28221|Deltaproteobacteria	M	Asp/Glu/Hydantoin racemase	-	-	5.1.1.13	ko:K01779	ko00250,ko01054,map00250,map01054	-	R00491	RC00302	ko00000,ko00001,ko01000	-	-	-	Asp_Glu_race
SRD3_k127_3865972_1	861299.J421_0248	6.65e-89	307.0	COG0515@1|root,COG3899@1|root,COG0515@2|Bacteria,COG3899@2|Bacteria,1ZUXK@142182|Gemmatimonadetes	2|Bacteria	T	AAA ATPase domain	-	-	2.7.11.1	ko:K12132	-	-	-	-	ko00000,ko01000,ko01001	-	-	-	AAA_16,Trans_reg_C
SRD3_k127_3873053_2	1112212.JH584235_gene1005	5.643e-142	453.0	COG1559@1|root,COG1559@2|Bacteria,1MUQF@1224|Proteobacteria,2TR89@28211|Alphaproteobacteria,2JZXN@204457|Sphingomonadales	204457|Sphingomonadales	S	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation	mltG	-	-	ko:K07082	-	-	-	-	ko00000	-	-	-	YceG
SRD3_k127_3873053_3	1379701.JPJC01000194_gene781	2.26e-98	329.0	COG0800@1|root,COG0800@2|Bacteria,1MUVJ@1224|Proteobacteria,2TUMH@28211|Alphaproteobacteria,2K1HN@204457|Sphingomonadales	204457|Sphingomonadales	G	Aldolase	eda	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	4.1.2.14,4.1.3.42	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	M00008,M00061,M00308,M00631	R00470,R05605	RC00307,RC00308,RC00435	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldolase
SRD3_k127_3873053_1	1112212.JH584235_gene1002	9.929e-151	484.0	COG0837@1|root,COG0837@2|Bacteria,1MVFI@1224|Proteobacteria,2U0CA@28211|Alphaproteobacteria,2K0NK@204457|Sphingomonadales	204457|Sphingomonadales	G	Belongs to the bacterial glucokinase family	glk	-	2.7.1.2	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R00299,R01600,R01786	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	Glucokinase
SRD3_k127_3873053_0	1112214.AHIS01000092_gene479	0.0	1019.0	COG0129@1|root,COG0129@2|Bacteria,1MU3T@1224|Proteobacteria,2TQNS@28211|Alphaproteobacteria,2K1X3@204457|Sphingomonadales	204457|Sphingomonadales	EG	Belongs to the IlvD Edd family	edd	-	4.2.1.12	ko:K01690	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	M00008	R02036	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	ILVD_EDD
SRD3_k127_3873053_4	1112212.JH584235_gene1000	1.946e-49	177.0	COG0363@1|root,COG0363@2|Bacteria,1R5K6@1224|Proteobacteria,2U5C7@28211|Alphaproteobacteria,2JZZT@204457|Sphingomonadales	204457|Sphingomonadales	G	6-phosphogluconolactonase	pgl	-	3.1.1.31	ko:K01057	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	M00004,M00006,M00008	R02035	RC00537	ko00000,ko00001,ko00002,ko01000	-	-	-	Glucosamine_iso
SRD3_k127_3877156_8	1112212.JH584235_gene3047	3.461e-172	542.0	COG1071@1|root,COG1071@2|Bacteria,1MU5R@1224|Proteobacteria,2TSEI@28211|Alphaproteobacteria,2K13V@204457|Sphingomonadales	204457|Sphingomonadales	C	COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit	bkdA1	-	1.2.4.4	ko:K00166	ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130	M00036	R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997	RC00027,RC00627,RC02743,RC02883,RC02949,RC02953	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	E1_dh,OxoDH_E1alpha_N
SRD3_k127_3877156_1	78245.Xaut_3044	0.0	1055.0	COG3256@1|root,COG3256@2|Bacteria,1MVT1@1224|Proteobacteria,2TUJ1@28211|Alphaproteobacteria,3F1W0@335928|Xanthobacteraceae	28211|Alphaproteobacteria	C	Cytochrome C and Quinol oxidase polypeptide I	norB	-	1.7.2.5	ko:K04561	ko00910,ko01120,map00910,map01120	M00529	R00294	RC02794	ko00000,ko00001,ko00002,ko01000	3.D.4.10	-	-	COX1
SRD3_k127_3877156_9	13689.BV96_04645	1.571e-162	523.0	COG3213@1|root,COG3213@2|Bacteria,1MUJK@1224|Proteobacteria,2TSQ2@28211|Alphaproteobacteria,2K1GY@204457|Sphingomonadales	204457|Sphingomonadales	P	NnrS protein	-	-	-	-	-	-	-	-	-	-	-	-	NnrS
SRD3_k127_3877156_14	420324.KI911999_gene8052	3.164e-42	164.0	COG4544@1|root,COG4544@2|Bacteria,1MY56@1224|Proteobacteria,2TT91@28211|Alphaproteobacteria,1JUQR@119045|Methylobacteriaceae	28211|Alphaproteobacteria	S	SOS response	-	GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496	-	ko:K14160	-	-	-	-	ko00000,ko03400	-	-	-	-
SRD3_k127_3877156_4	1112212.JH584235_gene3045	5.281e-240	756.0	COG0389@1|root,COG0389@2|Bacteria,1MU5X@1224|Proteobacteria,2TQVR@28211|Alphaproteobacteria,2JZYV@204457|Sphingomonadales	204457|Sphingomonadales	L	Nucleotidyltransferase DNA polymerase involved in DNA repair	-	-	-	ko:K14161	-	-	-	-	ko00000,ko03400	-	-	-	IMS
SRD3_k127_3877156_0	1112214.AHIS01000003_gene1832	0.0	1670.0	COG0587@1|root,COG0587@2|Bacteria,1MUE4@1224|Proteobacteria,2TRUB@28211|Alphaproteobacteria,2JZWI@204457|Sphingomonadales	204457|Sphingomonadales	L	DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase	-	-	-	-	-	-	-	-	-	-	-	-	DNA_pol3_alpha,HHH_6,PHP,tRNA_anti-codon
SRD3_k127_3877156_7	1379701.JPJC01000157_gene552	1.336e-201	629.0	COG0179@1|root,COG0179@2|Bacteria,1MV0V@1224|Proteobacteria,2TQYU@28211|Alphaproteobacteria,2K2VH@204457|Sphingomonadales	204457|Sphingomonadales	Q	COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)	-	-	3.7.1.2	ko:K16171	ko00350,ko00643,ko01100,ko01120,map00350,map00643,map01100,map01120	M00044	R01364	RC00326,RC00446	ko00000,ko00001,ko00002,ko01000	-	-	-	FAA_hydrolase
SRD3_k127_3877156_5	1112216.JH594425_gene1740	2.007e-226	706.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TR15@28211|Alphaproteobacteria,2K1CR@204457|Sphingomonadales	204457|Sphingomonadales	I	acyl-CoA dehydrogenase	-	-	1.3.8.8	ko:K00255	ko00071,ko01100,ko01212,ko03320,map00071,map01100,map01212,map03320	M00087	R01279,R03777,R03857,R03990,R04751,R04754	RC00052	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SRD3_k127_3877156_16	1144305.PMI02_01067	5.564e-28	116.0	COG0745@1|root,COG0745@2|Bacteria,1QUU8@1224|Proteobacteria,2TW7W@28211|Alphaproteobacteria,2K84B@204457|Sphingomonadales	204457|Sphingomonadales	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
SRD3_k127_3877156_3	1112212.JH584235_gene3037	7.047e-242	758.0	COG0513@1|root,COG0513@2|Bacteria,1MU49@1224|Proteobacteria,2TR6Q@28211|Alphaproteobacteria,2K0U4@204457|Sphingomonadales	204457|Sphingomonadales	L	DEAD DEAH box helicase	-	-	3.6.4.13	ko:K11927	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	DEAD,Helicase_C
SRD3_k127_3877156_15	1090320.KB900605_gene441	1.541e-32	128.0	2AM08@1|root,317SA@2|Bacteria,1NKII@1224|Proteobacteria,2UT0U@28211|Alphaproteobacteria,2KE79@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3877156_13	1112216.JH594425_gene541	4.161e-102	357.0	COG0778@1|root,COG0778@2|Bacteria,1PG8V@1224|Proteobacteria,2U59W@28211|Alphaproteobacteria,2K283@204457|Sphingomonadales	204457|Sphingomonadales	C	Nitroreductase family	-	-	-	-	-	-	-	-	-	-	-	-	Nitroreductase
SRD3_k127_3877156_6	1112214.AHIS01000026_gene996	2.4e-221	693.0	COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,2TSA0@28211|Alphaproteobacteria,2K081@204457|Sphingomonadales	204457|Sphingomonadales	I	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation	-	-	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
SRD3_k127_3877156_11	1112212.JH584235_gene3034	3.334e-143	457.0	COG1028@1|root,COG1028@2|Bacteria,1MUBQ@1224|Proteobacteria,2TRPN@28211|Alphaproteobacteria,2K13W@204457|Sphingomonadales	204457|Sphingomonadales	IQ	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short,adh_short_C2
SRD3_k127_3877156_17	194867.ALBQ01000027_gene2824	7.689e-06	53.0	299Z9@1|root,2ZX0X@2|Bacteria,1Q7NQ@1224|Proteobacteria,2VDU2@28211|Alphaproteobacteria,2K7RG@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_3877156_2	1449076.JOOE01000004_gene7	1.276e-254	792.0	COG0477@1|root,COG2814@2|Bacteria,1MU1I@1224|Proteobacteria,2TVXT@28211|Alphaproteobacteria,2JZYF@204457|Sphingomonadales	204457|Sphingomonadales	EGP	Major facilitator superfamily	-	-	-	ko:K03446	-	M00701	-	-	ko00000,ko00002,ko02000	2.A.1.3	-	-	MFS_1
SRD3_k127_3877156_10	194867.ALBQ01000011_gene138	4.052e-149	483.0	COG1566@1|root,COG1566@2|Bacteria,1MU7I@1224|Proteobacteria,2TS39@28211|Alphaproteobacteria,2K1WC@204457|Sphingomonadales	204457|Sphingomonadales	V	Secretion protein, HlyD	vceA	-	-	ko:K03543	-	M00701	-	-	ko00000,ko00002,ko02000	8.A.1.1	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
SRD3_k127_3877156_12	1449076.JOOE01000004_gene9	5.15e-137	445.0	COG1538@1|root,COG1538@2|Bacteria,1MUZZ@1224|Proteobacteria,2TU4U@28211|Alphaproteobacteria,2K1W0@204457|Sphingomonadales	204457|Sphingomonadales	MU	RND efflux system, outer membrane lipoprotein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
SRD3_k127_387956_3	1112212.JH584235_gene624	3.61e-98	324.0	COG1208@1|root,COG1208@2|Bacteria,1R9ZD@1224|Proteobacteria,2TU2V@28211|Alphaproteobacteria,2K1HH@204457|Sphingomonadales	204457|Sphingomonadales	JM	Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon)	-	-	2.7.7.99	ko:K00992	ko00520,ko01100,map00520,map01100	-	R11025	RC00002	ko00000,ko00001,ko01000	-	-	-	NTP_transf_3,NTP_transferase
SRD3_k127_387956_2	1112212.JH584235_gene625	1.542e-158	512.0	COG3178@1|root,COG3178@2|Bacteria,1MXCH@1224|Proteobacteria,2TSJD@28211|Alphaproteobacteria,2K04R@204457|Sphingomonadales	204457|Sphingomonadales	S	Phosphotransferase	-	-	2.7.1.221	ko:K07102	ko00520,ko01100,map00520,map01100	-	R08968,R11024	RC00002,RC00078	ko00000,ko00001,ko01000	-	-	-	APH
SRD3_k127_387956_4	1112214.AHIS01000085_gene3679	7.943e-68	233.0	COG0802@1|root,COG0802@2|Bacteria,1RGYU@1224|Proteobacteria,2UBQ9@28211|Alphaproteobacteria,2K5A7@204457|Sphingomonadales	204457|Sphingomonadales	S	ATPase or kinase	-	-	-	ko:K06925	-	-	-	-	ko00000,ko03016	-	-	-	TsaE
SRD3_k127_387956_5	1112214.AHIS01000085_gene3678	8.736e-29	120.0	2DNNV@1|root,32YCB@2|Bacteria,1N7IN@1224|Proteobacteria,2UGF2@28211|Alphaproteobacteria,2K79P@204457|Sphingomonadales	204457|Sphingomonadales	S	CcdB protein	-	-	-	ko:K19163	-	-	-	-	ko00000,ko02048	-	-	-	CcdB
SRD3_k127_387956_6	46429.BV95_01798	5.697e-20	91.0	COG5302@1|root,COG5302@2|Bacteria,1NIFA@1224|Proteobacteria,2UF18@28211|Alphaproteobacteria,2K7P0@204457|Sphingomonadales	204457|Sphingomonadales	S	Post-segregation antitoxin CcdA	-	-	-	ko:K19164	-	-	-	-	ko00000,ko02048	-	-	-	CcdA
SRD3_k127_387956_0	1112212.JH584235_gene627	0.0	1174.0	COG0642@1|root,COG2205@2|Bacteria,1MVY8@1224|Proteobacteria,2TS5B@28211|Alphaproteobacteria,2K08R@204457|Sphingomonadales	204457|Sphingomonadales	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_7
SRD3_k127_387956_1	745310.G432_07745	6.126e-250	821.0	COG3209@1|root,COG3209@2|Bacteria,1MVV1@1224|Proteobacteria,2UBV3@28211|Alphaproteobacteria,2K32E@204457|Sphingomonadales	204457|Sphingomonadales	M	RHS Repeat	-	-	-	-	-	-	-	-	-	-	-	-	LysM,RHS_repeat
SRD3_k127_3923578_1	1449076.JOOE01000001_gene2509	1.039e-274	856.0	COG4774@1|root,COG4774@2|Bacteria,1R6E9@1224|Proteobacteria,2U3P8@28211|Alphaproteobacteria,2KEGX@204457|Sphingomonadales	204457|Sphingomonadales	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SRD3_k127_3923578_2	13689.BV96_02142	1.973e-191	605.0	COG0715@1|root,COG0715@2|Bacteria,1MVJA@1224|Proteobacteria,2TTB8@28211|Alphaproteobacteria,2K1HI@204457|Sphingomonadales	204457|Sphingomonadales	P	NMT1/THI5 like	-	-	-	ko:K02051	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	NMT1,NMT1_2
SRD3_k127_3923578_5	702113.PP1Y_Mpl2275	3.012e-141	451.0	COG0600@1|root,COG0600@2|Bacteria,1MWDJ@1224|Proteobacteria,2TTR3@28211|Alphaproteobacteria,2K2H5@204457|Sphingomonadales	204457|Sphingomonadales	P	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02050	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	BPD_transp_1
SRD3_k127_3923578_6	452662.SJA_C2-01350	1.768e-131	437.0	COG1116@1|root,COG1116@2|Bacteria,1MWZG@1224|Proteobacteria,2TT79@28211|Alphaproteobacteria,2K0H1@204457|Sphingomonadales	204457|Sphingomonadales	P	ABC transporter	-	-	-	ko:K02049	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	ABC_tran
SRD3_k127_3923578_8	279238.Saro_0609	3.533e-78	263.0	COG0864@1|root,COG0864@2|Bacteria,1RDN6@1224|Proteobacteria,2U61K@28211|Alphaproteobacteria,2K4CQ@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	-	-	-	ko:K07722	-	-	-	-	ko00000,ko03000	-	-	-	NikR_C,RHH_1
SRD3_k127_3923578_3	452662.SJA_C2-01370	1.215e-158	502.0	COG3665@1|root,COG3665@2|Bacteria,1N2KR@1224|Proteobacteria,2TSBV@28211|Alphaproteobacteria,2K1Q9@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF1989)	-	-	-	ko:K09967	-	-	-	-	ko00000	-	-	-	DUF1989
SRD3_k127_3923578_7	13689.BV96_02147	1.968e-131	419.0	COG3665@1|root,COG3665@2|Bacteria,1N9DM@1224|Proteobacteria,2TU1Z@28211|Alphaproteobacteria,2K0UW@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF1989)	-	-	-	ko:K09967	-	-	-	-	ko00000	-	-	-	DUF1989
SRD3_k127_3923578_0	13689.BV96_02148	0.0	2116.0	COG0439@1|root,COG1984@1|root,COG2049@1|root,COG0439@2|Bacteria,COG1984@2|Bacteria,COG2049@2|Bacteria,1MU4H@1224|Proteobacteria,2TRU5@28211|Alphaproteobacteria,2K20A@204457|Sphingomonadales	204457|Sphingomonadales	EI	Allophanate hydrolase subunit 2	-	-	6.3.4.6	ko:K01941	ko00220,ko00791,ko01100,map00220,map00791,map01100	-	R00774	RC00378	ko00000,ko00001,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2,CT_A_B,CT_C_D
SRD3_k127_3923578_4	1144305.PMI02_00346	8.954e-151	489.0	COG0154@1|root,COG0154@2|Bacteria,1MUVQ@1224|Proteobacteria,2TR00@28211|Alphaproteobacteria,2K2BN@204457|Sphingomonadales	204457|Sphingomonadales	J	Amidase	-	-	3.5.1.54	ko:K01457	ko00220,ko00791,ko01100,ko01120,map00220,map00791,map01100,map01120	-	R00005	RC02756	ko00000,ko00001,ko01000	-	-	-	Amidase
SRD3_k127_3949001_3	1550073.JROH01000016_gene340	1.489e-136	438.0	COG1312@1|root,COG1312@2|Bacteria,1MWYD@1224|Proteobacteria,2TTDI@28211|Alphaproteobacteria,2K1XS@204457|Sphingomonadales	204457|Sphingomonadales	G	Catalyzes the dehydration of D-mannonate	-	-	-	-	-	-	-	-	-	-	-	-	UxuA
SRD3_k127_3949001_0	1219049.SP5_061_00080	0.0	1040.0	COG3250@1|root,COG3250@2|Bacteria,1MVBN@1224|Proteobacteria,2U0KF@28211|Alphaproteobacteria,2K271@204457|Sphingomonadales	204457|Sphingomonadales	G	Glycosyl hydrolases family 2, sugar binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N
SRD3_k127_3949001_1	1550073.JROH01000003_gene2405	5.469e-230	731.0	COG2203@1|root,COG5001@1|root,COG2203@2|Bacteria,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,2K1GG@204457|Sphingomonadales	204457|Sphingomonadales	T	GAF domain	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GAF_2,GGDEF
SRD3_k127_3949001_2	702113.PP1Y_Mpl2433	1.081e-200	628.0	COG3000@1|root,COG3000@2|Bacteria,1QNUX@1224|Proteobacteria,2U0G7@28211|Alphaproteobacteria,2K1MP@204457|Sphingomonadales	204457|Sphingomonadales	I	Fatty acid hydroxylase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
SRD3_k127_3952421_5	1219049.SP5_065_00060	6.256e-49	178.0	COG0635@1|root,COG0635@2|Bacteria,1MV1I@1224|Proteobacteria,2TRKT@28211|Alphaproteobacteria,2K1GX@204457|Sphingomonadales	204457|Sphingomonadales	H	Belongs to the anaerobic coproporphyrinogen-III oxidase family	hemN	-	-	-	-	-	-	-	-	-	-	-	Radical_SAM
SRD3_k127_3952421_3	1112212.JH584235_gene1604	6.014e-100	330.0	COG0664@1|root,COG0664@2|Bacteria,1MVGE@1224|Proteobacteria,2TV0E@28211|Alphaproteobacteria,2K40D@204457|Sphingomonadales	204457|Sphingomonadales	K	CRP FNR family	-	-	-	ko:K01420	-	-	-	-	ko00000,ko03000	-	-	-	HTH_Crp_2,cNMP_binding
SRD3_k127_3952421_2	1346791.M529_19085	3.232e-137	441.0	COG0730@1|root,COG0730@2|Bacteria,1R3V4@1224|Proteobacteria,2TRYX@28211|Alphaproteobacteria,2K204@204457|Sphingomonadales	204457|Sphingomonadales	S	membrane transporter protein	-	-	-	-	-	-	-	-	-	-	-	-	TauE
SRD3_k127_3952421_1	1112212.JH584235_gene3450	3.332e-208	652.0	COG0079@1|root,COG0079@2|Bacteria,1R774@1224|Proteobacteria,2TQJG@28211|Alphaproteobacteria,2K1P4@204457|Sphingomonadales	204457|Sphingomonadales	E	Aminotransferase	-	-	2.6.1.9	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	M00026	R00694,R00734,R03243	RC00006,RC00888	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
SRD3_k127_3952421_0	1470591.BW41_02516	6.108e-289	910.0	COG1629@1|root,COG4771@2|Bacteria,1MUNK@1224|Proteobacteria,2TRCG@28211|Alphaproteobacteria,2K0ND@204457|Sphingomonadales	204457|Sphingomonadales	P	receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SRD3_k127_3952421_7	1144307.PMI04_00370	6.091e-08	59.0	COG3712@1|root,COG3712@2|Bacteria,1RGU3@1224|Proteobacteria,2UPE1@28211|Alphaproteobacteria,2K5F4@204457|Sphingomonadales	204457|Sphingomonadales	PT	FecR protein	-	-	-	ko:K07165	-	-	-	-	ko00000	-	-	-	DUF4880,FecR
SRD3_k127_3952421_4	1219045.BV98_002590	3.224e-53	197.0	COG1595@1|root,COG1595@2|Bacteria,1RM2Q@1224|Proteobacteria,2UP4Y@28211|Alphaproteobacteria,2K4ZU@204457|Sphingomonadales	204457|Sphingomonadales	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
SRD3_k127_3977855_4	1449076.JOOE01000002_gene943	2.33e-65	228.0	COG3710@1|root,COG3710@2|Bacteria,1PE98@1224|Proteobacteria,2VD0F@28211|Alphaproteobacteria,2K3KN@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulatory protein, C terminal	-	-	-	-	-	-	-	-	-	-	-	-	Trans_reg_C
SRD3_k127_3977855_2	1449076.JOOE01000002_gene1453	1.398e-97	336.0	COG2133@1|root,COG2133@2|Bacteria,1R86D@1224|Proteobacteria,2U1Z1@28211|Alphaproteobacteria,2K4BI@204457|Sphingomonadales	204457|Sphingomonadales	G	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	GSDH
SRD3_k127_3977855_0	1112212.JH584235_gene433	9.299e-182	573.0	COG1830@1|root,COG1830@2|Bacteria,1MW9N@1224|Proteobacteria,2TSQD@28211|Alphaproteobacteria,2JZV8@204457|Sphingomonadales	204457|Sphingomonadales	G	DeoC/LacD family aldolase	-	-	4.1.2.13	ko:K11645	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00003	R01068,R01070,R01829,R02568	RC00438,RC00439,RC00603,RC00604	ko00000,ko00001,ko00002,ko01000	-	-	-	DeoC
SRD3_k127_3977855_5	1123269.NX02_10340	1.787e-34	138.0	COG1359@1|root,COG1359@2|Bacteria,1N1I5@1224|Proteobacteria,2UCV3@28211|Alphaproteobacteria,2K64T@204457|Sphingomonadales	204457|Sphingomonadales	S	Antibiotic biosynthesis monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	ABM
SRD3_k127_3977855_3	1449076.JOOE01000001_gene1905	5.226e-93	310.0	COG4122@1|root,COG4122@2|Bacteria,1R4VI@1224|Proteobacteria,2U6AD@28211|Alphaproteobacteria,2K404@204457|Sphingomonadales	204457|Sphingomonadales	S	O-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_3
SRD3_k127_3977855_1	1549858.MC45_05080	2.171e-115	382.0	COG0352@1|root,COG0352@2|Bacteria,1MV42@1224|Proteobacteria,2TSSA@28211|Alphaproteobacteria,2K16H@204457|Sphingomonadales	204457|Sphingomonadales	H	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)	thiE	-	2.5.1.3	ko:K00788	ko00730,ko01100,map00730,map01100	M00127	R03223,R10712	RC00224,RC03255,RC03397	ko00000,ko00001,ko00002,ko01000	-	-	-	TMP-TENI
SRD3_k127_4007592_8	1112212.JH584235_gene1416	2.465e-124	407.0	COG0275@1|root,COG0275@2|Bacteria,1MUT4@1224|Proteobacteria,2TRQA@28211|Alphaproteobacteria,2K178@204457|Sphingomonadales	204457|Sphingomonadales	J	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA	rsmH	-	2.1.1.199	ko:K03438	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltransf_5
SRD3_k127_4007592_16	1112216.JH594425_gene2046	3.124e-67	232.0	COG2001@1|root,COG2001@2|Bacteria,1RC62@1224|Proteobacteria,2U8RU@28211|Alphaproteobacteria,2K3M2@204457|Sphingomonadales	204457|Sphingomonadales	K	Belongs to the MraZ family	-	-	-	ko:K03925	-	-	-	-	ko00000	-	-	-	MraZ
SRD3_k127_4007592_27	1112214.AHIS01000027_gene1040	4.403e-22	100.0	2AKWS@1|root,31BQ7@2|Bacteria,1Q7KU@1224|Proteobacteria,2VDS5@28211|Alphaproteobacteria,2K5VI@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4007592_5	1449076.JOOE01000001_gene2680	1.176e-191	600.0	COG0031@1|root,COG0031@2|Bacteria,1MUBE@1224|Proteobacteria,2TR4W@28211|Alphaproteobacteria,2K0XR@204457|Sphingomonadales	204457|Sphingomonadales	E	Cysteine synthase	-	-	2.5.1.47	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	M00021	R00897,R03601,R04859	RC00020,RC02814,RC02821	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
SRD3_k127_4007592_21	1449076.JOOE01000001_gene2681	2.6e-54	198.0	COG4323@1|root,COG4323@2|Bacteria,1N16T@1224|Proteobacteria,2U9EX@28211|Alphaproteobacteria,2K64Z@204457|Sphingomonadales	204457|Sphingomonadales	S	membrane	-	-	-	-	-	-	-	-	-	-	-	-	DUF962
SRD3_k127_4007592_4	702113.PP1Y_AT34114	6.97e-201	640.0	COG2304@1|root,COG2304@2|Bacteria,1MUTS@1224|Proteobacteria,2TSQU@28211|Alphaproteobacteria,2K35S@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF3520)	-	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	DUF3520,VWA,vWF_A
SRD3_k127_4007592_30	1379701.JPJC01000004_gene351	2.88e-06	49.0	COG0009@1|root,COG0009@2|Bacteria,1MVPM@1224|Proteobacteria,2TRIM@28211|Alphaproteobacteria,2K1JS@204457|Sphingomonadales	204457|Sphingomonadales	J	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine	-	-	2.7.7.87	ko:K07566	-	-	R10463	RC00745	ko00000,ko01000,ko03009,ko03016	-	-	-	SUA5,Sua5_yciO_yrdC
SRD3_k127_4007592_6	194867.ALBQ01000001_gene3003	1.126e-190	615.0	COG0624@1|root,COG0624@2|Bacteria,1MWJS@1224|Proteobacteria,2TUHT@28211|Alphaproteobacteria,2K1MW@204457|Sphingomonadales	204457|Sphingomonadales	E	Acetylornithine deacetylase Succinyl-diaminopimelate	-	-	-	-	-	-	-	-	-	-	-	-	M20_dimer,Peptidase_M20,Peptidase_M28
SRD3_k127_4007592_24	1346791.M529_12380	8.028e-45	167.0	COG0745@1|root,COG0745@2|Bacteria,1N8CM@1224|Proteobacteria,2UINQ@28211|Alphaproteobacteria,2KANM@204457|Sphingomonadales	204457|Sphingomonadales	KT	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
SRD3_k127_4007592_7	1346791.M529_12375	1.305e-147	478.0	COG3063@1|root,COG3063@2|Bacteria,1N1DY@1224|Proteobacteria,2UF2W@28211|Alphaproteobacteria,2KAE4@204457|Sphingomonadales	204457|Sphingomonadales	NU	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4007592_10	1346791.M529_12370	5.939e-102	342.0	COG1413@1|root,COG1413@2|Bacteria,1N7UC@1224|Proteobacteria,2UGUW@28211|Alphaproteobacteria,2KA0S@204457|Sphingomonadales	204457|Sphingomonadales	C	HEAT repeats	-	-	-	-	-	-	-	-	-	-	-	-	HEAT_2
SRD3_k127_4007592_1	1346791.M529_12365	3.646e-251	788.0	COG1215@1|root,COG1215@2|Bacteria,1MXG7@1224|Proteobacteria,2TVZ5@28211|Alphaproteobacteria	28211|Alphaproteobacteria	M	Glycosyl transferase, family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_3
SRD3_k127_4007592_22	1346791.M529_12355	1.205e-51	190.0	COG0745@1|root,COG0745@2|Bacteria,1MZAS@1224|Proteobacteria,2UBY6@28211|Alphaproteobacteria,2K78Y@204457|Sphingomonadales	204457|Sphingomonadales	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
SRD3_k127_4007592_2	1346791.M529_12350	5.216e-243	770.0	COG5002@1|root,COG5002@2|Bacteria,1R5EN@1224|Proteobacteria,2U4EG@28211|Alphaproteobacteria,2K2HU@204457|Sphingomonadales	204457|Sphingomonadales	T	CHASE3 domain	-	-	-	-	-	-	-	-	-	-	-	-	CHASE3,HATPase_c,HisKA,PAS,PAS_9,Response_reg
SRD3_k127_4007592_28	1248760.ANFZ01000002_gene3125	1.905e-21	102.0	2EHBD@1|root,33B38@2|Bacteria,1MZRE@1224|Proteobacteria,2UE9D@28211|Alphaproteobacteria,2K709@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF3617)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3617
SRD3_k127_4007592_13	1126627.BAWE01000005_gene4922	1.523e-79	271.0	COG1943@1|root,COG1943@2|Bacteria,1P19I@1224|Proteobacteria,2TR9D@28211|Alphaproteobacteria,3JTU4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Transposase IS200 like	-	-	-	ko:K07491	-	-	-	-	ko00000	-	-	-	Y1_Tnp
SRD3_k127_4007592_23	1470591.BW41_01969	2.845e-51	196.0	COG0457@1|root,COG3577@1|root,COG0457@2|Bacteria,COG3577@2|Bacteria,1MVIW@1224|Proteobacteria,2TV3Y@28211|Alphaproteobacteria,2KCMD@204457|Sphingomonadales	204457|Sphingomonadales	S	gag-polyprotein putative aspartyl protease	-	-	-	-	-	-	-	-	-	-	-	-	Asp_protease_2
SRD3_k127_4007592_15	46429.BV95_03175	1.339e-68	237.0	COG3812@1|root,COG3812@2|Bacteria,1RGUV@1224|Proteobacteria,2U9BA@28211|Alphaproteobacteria,2K5EP@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF1993)	-	-	-	ko:K09983	-	-	-	-	ko00000	-	-	-	DUF1993
SRD3_k127_4007592_31	1112212.JH584235_gene3825	2.302e-05	54.0	COG3773@1|root,COG3773@2|Bacteria,1RE11@1224|Proteobacteria,2U89A@28211|Alphaproteobacteria,2K11T@204457|Sphingomonadales	204457|Sphingomonadales	M	Cell Wall Hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_2
SRD3_k127_4007592_19	1081640.AGFU01000003_gene1524	5.994e-61	217.0	COG3663@1|root,COG3663@2|Bacteria,1REPV@1224|Proteobacteria,2UE8H@28211|Alphaproteobacteria,2K6DA@204457|Sphingomonadales	204457|Sphingomonadales	L	Uracil-DNA glycosylase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	UDG
SRD3_k127_4007592_3	1112216.JH594425_gene2043	1.456e-241	755.0	COG0389@1|root,COG0389@2|Bacteria,1MUUH@1224|Proteobacteria,2TSJN@28211|Alphaproteobacteria,2K1Q4@204457|Sphingomonadales	204457|Sphingomonadales	L	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII	-	-	2.7.7.7	ko:K02346	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	IMS,IMS_C,IMS_HHH
SRD3_k127_4007592_25	1112216.JH594425_gene2042	5.925e-43	162.0	2AKTW@1|root,31BKY@2|Bacteria,1NYMF@1224|Proteobacteria,2UTU9@28211|Alphaproteobacteria,2K5IB@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4007592_9	1112214.AHIS01000011_gene222	3.615e-123	398.0	COG1192@1|root,COG1192@2|Bacteria,1R62T@1224|Proteobacteria,2TUDH@28211|Alphaproteobacteria,2JZW4@204457|Sphingomonadales	204457|Sphingomonadales	D	Chromosome partitioning	-	-	-	-	-	-	-	-	-	-	-	-	AAA_31
SRD3_k127_4007592_12	1112214.AHIS01000011_gene221	2.403e-100	333.0	COG2360@1|root,COG2360@2|Bacteria,1R9W8@1224|Proteobacteria,2U59K@28211|Alphaproteobacteria,2K180@204457|Sphingomonadales	204457|Sphingomonadales	O	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine	aat	-	2.3.2.6	ko:K00684	-	-	R03813,R11443,R11444	RC00055,RC00064	ko00000,ko01000	-	-	-	Leu_Phe_trans
SRD3_k127_4007592_18	1549858.MC45_09330	1.41e-62	218.0	COG3761@1|root,COG3761@2|Bacteria,1RHS3@1224|Proteobacteria,2U95G@28211|Alphaproteobacteria,2K5FH@204457|Sphingomonadales	204457|Sphingomonadales	C	NADH ubiquinone oxidoreductase 17.2 kD subunit	-	-	-	-	-	-	-	-	-	-	-	-	NDUFA12
SRD3_k127_4007592_11	685778.AORL01000010_gene2565	7.396e-102	342.0	COG1073@1|root,COG1073@2|Bacteria,1R67P@1224|Proteobacteria,2U3D5@28211|Alphaproteobacteria,2K2QV@204457|Sphingomonadales	204457|Sphingomonadales	S	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_4
SRD3_k127_4007592_20	1219049.SP5_107_00010	1.257e-58	208.0	COG1430@1|root,COG1430@2|Bacteria,1MZBJ@1224|Proteobacteria,2UBSI@28211|Alphaproteobacteria,2K5JY@204457|Sphingomonadales	204457|Sphingomonadales	S	Uncharacterized ACR, COG1430	-	-	-	ko:K09005	-	-	-	-	ko00000	-	-	-	DUF192
SRD3_k127_4007592_14	1379701.JPJC01000190_gene1172	1.916e-70	243.0	COG1278@1|root,COG1278@2|Bacteria,1RAUE@1224|Proteobacteria,2U0S7@28211|Alphaproteobacteria,2K4T8@204457|Sphingomonadales	204457|Sphingomonadales	K	Cold shock protein domain	-	-	-	ko:K03704	-	-	-	-	ko00000,ko03000	-	-	-	CSD
SRD3_k127_4007592_17	1112212.JH584235_gene1426	3.358e-63	223.0	COG2137@1|root,COG2137@2|Bacteria,1N2EE@1224|Proteobacteria,2U96W@28211|Alphaproteobacteria,2K59F@204457|Sphingomonadales	204457|Sphingomonadales	S	Regulatory protein RecX	recX	-	-	ko:K03565	-	-	-	-	ko00000,ko03400	-	-	-	RecX
SRD3_k127_4007592_0	1112212.JH584235_gene1427	1.25e-294	912.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TW3C@28211|Alphaproteobacteria,2K0HU@204457|Sphingomonadales	204457|Sphingomonadales	IQ	COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II	-	-	-	ko:K00666	-	-	-	-	ko00000,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C_2
SRD3_k127_4038336_0	1112216.JH594425_gene884	7.208e-211	664.0	COG1501@1|root,COG1501@2|Bacteria,1MWNJ@1224|Proteobacteria,2U1U0@28211|Alphaproteobacteria,2K175@204457|Sphingomonadales	204457|Sphingomonadales	G	Galactose mutarotase-like	-	-	-	-	-	-	-	-	-	-	-	-	Gal_mutarotas_2,Glyco_hydro_31
SRD3_k127_4038336_1	983920.Y88_2855	4.534e-42	159.0	COG5349@1|root,COG5349@2|Bacteria,1MZDD@1224|Proteobacteria,2UCM4@28211|Alphaproteobacteria,2K63V@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF983)	-	-	-	-	-	-	-	-	-	-	-	-	DUF983
SRD3_k127_4040202_4	1123269.NX02_22720	3.52e-148	473.0	COG1874@1|root,COG1874@2|Bacteria,1R6YQ@1224|Proteobacteria,2U1GJ@28211|Alphaproteobacteria,2K286@204457|Sphingomonadales	204457|Sphingomonadales	G	Belongs to the glycosyl hydrolase 35 family	-	-	3.2.1.23	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100	-	R01105,R01678,R03355,R04783,R06114	RC00049,RC00452	ko00000,ko00001,ko01000	-	-	-	BetaGal_dom2,BetaGal_dom3,BetaGal_dom4_5,Glyco_hydro_35
SRD3_k127_4040202_7	69395.JQLZ01000004_gene599	2.565e-116	383.0	COG1609@1|root,COG1609@2|Bacteria,1MW7E@1224|Proteobacteria,2TVGC@28211|Alphaproteobacteria,2KHSG@204458|Caulobacterales	204458|Caulobacterales	K	periplasmic binding protein LacI transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	LacI,Peripla_BP_3
SRD3_k127_4040202_6	194867.ALBQ01000005_gene1642	1.18e-139	454.0	COG0657@1|root,COG0657@2|Bacteria,1R4BT@1224|Proteobacteria,2U6SA@28211|Alphaproteobacteria,2K2VW@204457|Sphingomonadales	204457|Sphingomonadales	I	alpha/beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3
SRD3_k127_4040202_5	1470591.BW41_00860	2.882e-144	465.0	COG0657@1|root,COG0657@2|Bacteria,1N5QB@1224|Proteobacteria,2U1WU@28211|Alphaproteobacteria,2K1HS@204457|Sphingomonadales	204457|Sphingomonadales	I	alpha/beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3,Peptidase_S9
SRD3_k127_4040202_1	509190.Cseg_0471	6.789e-233	729.0	COG2211@1|root,COG2211@2|Bacteria,1MX4Z@1224|Proteobacteria,2U2DZ@28211|Alphaproteobacteria	28211|Alphaproteobacteria	G	Sugar transporter	-	-	-	ko:K16211	-	-	-	-	ko00000,ko02000	2.A.2.6	-	-	MFS_1
SRD3_k127_4040202_8	509190.Cseg_0472	2.922e-100	336.0	COG2819@1|root,COG2819@2|Bacteria,1PTJI@1224|Proteobacteria,2U89V@28211|Alphaproteobacteria,2KIIK@204458|Caulobacterales	204458|Caulobacterales	S	Putative esterase	-	-	-	-	-	-	-	-	-	-	-	-	Esterase
SRD3_k127_4040202_2	509190.Cseg_0473	4.496e-172	547.0	COG0657@1|root,COG0657@2|Bacteria,1RD8A@1224|Proteobacteria,2U0DE@28211|Alphaproteobacteria,2KH92@204458|Caulobacterales	204458|Caulobacterales	I	alpha/beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3
SRD3_k127_4040202_3	1470591.BW41_00859	1.172e-158	507.0	COG0657@1|root,COG0657@2|Bacteria,1R4BT@1224|Proteobacteria,2UAX1@28211|Alphaproteobacteria,2KCR9@204457|Sphingomonadales	204457|Sphingomonadales	I	Carboxylesterase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3
SRD3_k127_4040202_0	1470591.BW41_00858	0.0	1252.0	COG4773@1|root,COG4773@2|Bacteria,1QWUD@1224|Proteobacteria,2TX5D@28211|Alphaproteobacteria,2K3UK@204457|Sphingomonadales	204457|Sphingomonadales	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SRD3_k127_4040202_9	1292034.OR37_02327	4.359e-34	139.0	COG2272@1|root,COG2272@2|Bacteria,1MVQZ@1224|Proteobacteria,2TTHT@28211|Alphaproteobacteria,2KHUT@204458|Caulobacterales	204458|Caulobacterales	I	Belongs to the type-B carboxylesterase lipase family	-	-	-	ko:K03929	-	-	-	-	ko00000,ko01000	-	CE10	-	COesterase
SRD3_k127_4069481_6	1207055.C100_17630	2.376e-128	423.0	COG1294@1|root,COG1294@2|Bacteria,1MURP@1224|Proteobacteria,2TU3I@28211|Alphaproteobacteria,2K0H9@204457|Sphingomonadales	204457|Sphingomonadales	C	oxidase, subunit	cydB	-	1.10.3.14	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cyt_bd_oxida_II
SRD3_k127_4069481_2	1088721.NSU_1856	1.833e-245	765.0	COG1271@1|root,COG1271@2|Bacteria,1MV60@1224|Proteobacteria,2TQMA@28211|Alphaproteobacteria,2K0ZR@204457|Sphingomonadales	204457|Sphingomonadales	C	oxidase, subunit	cydA	-	1.10.3.14	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cyt_bd_oxida_I
SRD3_k127_4069481_9	1549858.MC45_01735	2.027e-57	205.0	COG0545@1|root,COG0545@2|Bacteria,1RDA1@1224|Proteobacteria,2U9XK@28211|Alphaproteobacteria,2K4Y5@204457|Sphingomonadales	204457|Sphingomonadales	O	Peptidyl-prolyl cis-trans	-	-	5.2.1.8	ko:K03772	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	FKBP_C,FKBP_N
SRD3_k127_4069481_8	1379701.JPJC01000242_gene1021	1.455e-58	209.0	COG0545@1|root,COG0545@2|Bacteria,1RDA1@1224|Proteobacteria,2U9XK@28211|Alphaproteobacteria,2K4Y5@204457|Sphingomonadales	204457|Sphingomonadales	O	Peptidyl-prolyl cis-trans	-	-	5.2.1.8	ko:K03772	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	FKBP_C,FKBP_N
SRD3_k127_4069481_7	1112214.AHIS01000015_gene138	1.153e-73	254.0	COG0545@1|root,COG0545@2|Bacteria,1RDA1@1224|Proteobacteria,2U9XK@28211|Alphaproteobacteria,2K4Y5@204457|Sphingomonadales	204457|Sphingomonadales	O	Peptidyl-prolyl cis-trans	-	-	5.2.1.8	ko:K03772	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	FKBP_C,FKBP_N
SRD3_k127_4069481_12	392499.Swit_3869	1.276e-30	122.0	COG0828@1|root,COG0828@2|Bacteria,1MZA1@1224|Proteobacteria,2UC58@28211|Alphaproteobacteria,2K5X3@204457|Sphingomonadales	204457|Sphingomonadales	J	Belongs to the bacterial ribosomal protein bS21 family	rpsU	-	-	ko:K02970	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S21
SRD3_k127_4069481_1	194867.ALBQ01000018_gene2516	2.285e-249	776.0	COG0215@1|root,COG0215@2|Bacteria,1MV8H@1224|Proteobacteria,2TQQ1@28211|Alphaproteobacteria,2K19T@204457|Sphingomonadales	204457|Sphingomonadales	J	Belongs to the class-I aminoacyl-tRNA synthetase family	cysS	-	6.1.1.16	ko:K01883	ko00970,map00970	M00359,M00360	R03650	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DALR_2,tRNA-synt_1e
SRD3_k127_4069481_5	1112214.AHIS01000012_gene30	1.999e-136	441.0	COG0111@1|root,COG0111@2|Bacteria,1R65M@1224|Proteobacteria,2TTY3@28211|Alphaproteobacteria,2K1D4@204457|Sphingomonadales	204457|Sphingomonadales	EH	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family	-	-	-	-	-	-	-	-	-	-	-	-	2-Hacid_dh,2-Hacid_dh_C
SRD3_k127_4069481_10	279238.Saro_3579	6.942e-52	190.0	COG1309@1|root,COG1309@2|Bacteria,1MUUY@1224|Proteobacteria,2TUIH@28211|Alphaproteobacteria,2K6PB@204457|Sphingomonadales	204457|Sphingomonadales	K	WHG domain	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N,WHG
SRD3_k127_4069481_3	1112216.JH594426_gene3687	7.95e-214	678.0	COG3670@1|root,COG3670@2|Bacteria,1MY1X@1224|Proteobacteria,2TS7A@28211|Alphaproteobacteria,2K3AN@204457|Sphingomonadales	204457|Sphingomonadales	Q	Retinal pigment epithelial membrane protein	-	-	1.13.11.82	ko:K21822	-	-	-	-	ko00000,ko01000	-	-	-	RPE65
SRD3_k127_4069481_0	1112212.JH584235_gene3382	1.666e-287	887.0	COG3200@1|root,COG3200@2|Bacteria,1MUWF@1224|Proteobacteria,2TR0E@28211|Alphaproteobacteria,2K0JX@204457|Sphingomonadales	204457|Sphingomonadales	E	phospho-2-dehydro-3-deoxyheptonate aldolase	aroF	-	2.5.1.54	ko:K01626	ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024	M00022	R01826	RC00435	ko00000,ko00001,ko00002,ko01000	-	-	-	DAHP_synth_2
SRD3_k127_4069481_13	1120705.FG95_03782	4.04e-30	128.0	2AKJQ@1|root,31BBU@2|Bacteria,1NYWP@1224|Proteobacteria,2VGXM@28211|Alphaproteobacteria,2K6Q2@204457|Sphingomonadales	204457|Sphingomonadales	S	PilZ domain	-	-	-	-	-	-	-	-	-	-	-	-	PilZ
SRD3_k127_4069481_4	1346791.M529_07435	1.799e-147	476.0	COG3391@1|root,COG3391@2|Bacteria,1R3YF@1224|Proteobacteria,2TUFI@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	Lactonase
SRD3_k127_4069481_11	1346791.M529_07440	5.588e-39	148.0	COG1304@1|root,COG1304@2|Bacteria,1MUEZ@1224|Proteobacteria,2TQNW@28211|Alphaproteobacteria,2K18M@204457|Sphingomonadales	204457|Sphingomonadales	C	Dehydrogenase	lldD	-	1.1.2.3	ko:K00101	ko00620,ko01100,map00620,map01100	-	R00196	RC00044	ko00000,ko00001,ko01000	-	-	-	FMN_dh
SRD3_k127_4086661_4	1112214.AHIS01000034_gene1049	1.912e-65	225.0	COG0726@1|root,COG0726@2|Bacteria,1REXP@1224|Proteobacteria,2VG76@28211|Alphaproteobacteria,2KE1W@204457|Sphingomonadales	204457|Sphingomonadales	G	PFAM Polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
SRD3_k127_4086661_1	1112212.JH584235_gene1343	1.055e-123	407.0	COG5653@1|root,COG5653@2|Bacteria,1N7WR@1224|Proteobacteria,2VFSF@28211|Alphaproteobacteria,2KDYW@204457|Sphingomonadales	204457|Sphingomonadales	M	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_6
SRD3_k127_4086661_5	1112212.JH584235_gene2677	4.749e-11	64.0	COG0346@1|root,COG0351@1|root,COG0346@2|Bacteria,COG0351@2|Bacteria,1MU9J@1224|Proteobacteria,2TUKR@28211|Alphaproteobacteria,2K24Q@204457|Sphingomonadales	204457|Sphingomonadales	H	Phosphomethylpyrimidine kinase	thiD	-	2.7.1.49,2.7.4.7	ko:K00941	ko00730,ko01100,map00730,map01100	M00127	R03471,R04509	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyoxalase,Phos_pyr_kin
SRD3_k127_4086661_3	1112212.JH584235_gene1341	3.184e-93	309.0	COG1381@1|root,COG1381@2|Bacteria,1MVEJ@1224|Proteobacteria,2TTYW@28211|Alphaproteobacteria,2K120@204457|Sphingomonadales	204457|Sphingomonadales	L	Involved in DNA repair and RecF pathway recombination	recO	-	-	ko:K03584	ko03440,map03440	-	-	-	ko00000,ko00001,ko03400	-	-	-	RecO_C,RecO_N
SRD3_k127_4086661_0	59538.XP_005983007.1	6.389e-175	554.0	COG0473@1|root,KOG0786@2759|Eukaryota,39N7I@33154|Opisthokonta,3BXSE@33208|Metazoa,3E5XS@33213|Bilateria,48SPC@7711|Chordata,49P72@7742|Vertebrata,3JP3U@40674|Mammalia,4JCBX@91561|Cetartiodactyla	33208|Metazoa	E	3-isopropylmalate dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Iso_dh
SRD3_k127_4086661_2	194867.ALBQ01000020_gene2858	1.5e-123	403.0	COG1216@1|root,COG2246@1|root,COG1216@2|Bacteria,COG2246@2|Bacteria,1MV8J@1224|Proteobacteria,2TTYF@28211|Alphaproteobacteria,2K22B@204457|Sphingomonadales	204457|Sphingomonadales	M	COG0463 Glycosyltransferases involved in cell wall biogenesis	-	-	2.4.1.83	ko:K00721	ko00510,ko01100,map00510,map01100	-	R01009	RC00005	ko00000,ko00001,ko01000,ko01003	-	GT2	-	Glycos_transf_2,GtrA
SRD3_k127_4105342_0	765912.Thimo_0992	6.821e-218	693.0	COG0367@1|root,COG0367@2|Bacteria,1MW4E@1224|Proteobacteria,1RQ7D@1236|Gammaproteobacteria,1WWE5@135613|Chromatiales	1236|Gammaproteobacteria	E	Asparagine synthase, glutamine-hydrolyzing	-	-	6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	-	R00578	RC00010	ko00000,ko00001,ko01000,ko01002	-	-	-	Asn_synthase,GATase_7
SRD3_k127_4105342_6	187303.BN69_2391	6.512e-47	190.0	COG0438@1|root,COG0438@2|Bacteria,1NEF5@1224|Proteobacteria	1224|Proteobacteria	M	transferase activity, transferring glycosyl groups	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4105342_8	706587.Desti_0028	4.511e-23	109.0	COG2230@1|root,COG2230@2|Bacteria,1QW5Y@1224|Proteobacteria	1224|Proteobacteria	M	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
SRD3_k127_4105342_4	1499968.TCA2_3606	4.09e-101	344.0	COG0438@1|root,COG0438@2|Bacteria,1VDFZ@1239|Firmicutes,4HCGX@91061|Bacilli,26U6B@186822|Paenibacillaceae	91061|Bacilli	M	Glycosyl transferase	-	-	2.4.1.346	ko:K13668	-	-	R11703,R11704	-	ko00000,ko01000,ko01003	-	GT4	-	Glyco_transf_4,Glycos_transf_1
SRD3_k127_4105342_5	582899.Hden_0458	3.273e-64	244.0	COG3307@1|root,COG3307@2|Bacteria,1N225@1224|Proteobacteria,2U6JI@28211|Alphaproteobacteria,3N7GK@45401|Hyphomicrobiaceae	28211|Alphaproteobacteria	M	PFAM O-antigen polymerase	-	-	-	-	-	-	-	-	-	-	-	-	Wzy_C
SRD3_k127_4105342_1	1549858.MC45_17630	3.486e-177	581.0	COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,1MVI9@1224|Proteobacteria,2TT1Y@28211|Alphaproteobacteria,2K00D@204457|Sphingomonadales	204457|Sphingomonadales	D	protein involved in exopolysaccharide biosynthesis	-	-	-	ko:K16554	ko05111,map05111	-	-	-	ko00000,ko00001,ko02000	8.A.3.1	-	-	AAA_31,CbiA,GNVR,ParA,Wzz
SRD3_k127_4105342_9	107636.JQNK01000009_gene2696	1.73e-19	101.0	COG0457@1|root,COG0457@2|Bacteria,1RD7S@1224|Proteobacteria,2VGXY@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4105342_3	1112214.AHIS01000015_gene140	8.838e-162	512.0	COG1210@1|root,COG1210@2|Bacteria,1MV5F@1224|Proteobacteria,2TRT6@28211|Alphaproteobacteria,2K1NI@204457|Sphingomonadales	204457|Sphingomonadales	M	UTP-glucose-1-phosphate uridylyltransferase	ugpG	-	2.7.7.9	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	M00129,M00361,M00362,M00549	R00289	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	NTP_transferase
SRD3_k127_4105342_7	1187851.A33M_0967	2.145e-42	169.0	COG2227@1|root,COG2227@2|Bacteria,1QBZK@1224|Proteobacteria	1224|Proteobacteria	H	Methyltransferase domain	-	-	2.1.1.222,2.1.1.64	ko:K00568	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00117	R04988,R05614,R08769,R08781	RC00003,RC00392,RC01895	ko00000,ko00001,ko00002,ko01000	-	-	-	Methyltransf_11
SRD3_k127_4105342_2	1112216.JH594425_gene158	1.837e-175	560.0	COG0677@1|root,COG0677@2|Bacteria,1MUC6@1224|Proteobacteria,2TR5F@28211|Alphaproteobacteria,2K04J@204457|Sphingomonadales	204457|Sphingomonadales	M	Belongs to the UDP-glucose GDP-mannose dehydrogenase family	wecC	-	1.1.1.336	ko:K02472	ko00520,ko05111,map00520,map05111	-	R03317	RC00291	ko00000,ko00001,ko01000	-	-	-	UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N
SRD3_k127_4154979_22	1282362.AEAC466_18875	1.138e-68	245.0	arCOG11292@1|root,309SY@2|Bacteria,1P6BK@1224|Proteobacteria,2UWTX@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4154979_31	1282362.AEAC466_18880	6.103e-39	150.0	COG1846@1|root,COG1846@2|Bacteria,1N6YD@1224|Proteobacteria,2U0SG@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	MA20_36885	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SRD3_k127_4154979_16	1379701.JPJC01000258_gene2694	1.105e-96	320.0	28H7B@1|root,2Z7JJ@2|Bacteria,1MX57@1224|Proteobacteria,2TQZS@28211|Alphaproteobacteria,2JZXU@204457|Sphingomonadales	204457|Sphingomonadales	S	Putative 2OG-Fe(II) oxygenase	-	-	-	-	-	-	-	-	-	-	-	-	2OG-FeII_Oxy_5
SRD3_k127_4154979_33	1112216.JH594425_gene3245	4.301e-34	139.0	2A3F2@1|root,30RXS@2|Bacteria,1Q8F1@1224|Proteobacteria,2VEMV@28211|Alphaproteobacteria,2K84Z@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4154979_2	1449076.JOOE01000001_gene2991	9.359e-208	650.0	COG0012@1|root,COG0012@2|Bacteria,1MVM4@1224|Proteobacteria,2TRAD@28211|Alphaproteobacteria,2K213@204457|Sphingomonadales	204457|Sphingomonadales	J	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner	ychF	-	-	ko:K06942	-	-	-	-	ko00000,ko03009	-	-	-	MMR_HSR1,YchF-GTPase_C
SRD3_k127_4154979_26	1112216.JH594425_gene761	8.715e-57	218.0	COG0666@1|root,COG0666@2|Bacteria,1MZSX@1224|Proteobacteria,2UC99@28211|Alphaproteobacteria,2K9U2@204457|Sphingomonadales	204457|Sphingomonadales	S	response to abiotic stimulus	-	-	-	-	-	-	-	-	-	-	-	-	Ank
SRD3_k127_4154979_37	1112216.JH594425_gene3603	1.451e-13	74.0	2ABH6@1|root,310Y8@2|Bacteria,1PP02@1224|Proteobacteria,2V1JG@28211|Alphaproteobacteria,2KBNB@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4154979_3	1112214.AHIS01000036_gene1776	1.563e-197	632.0	COG3667@1|root,COG3667@2|Bacteria,1R6TA@1224|Proteobacteria,2U52R@28211|Alphaproteobacteria,2K3M1@204457|Sphingomonadales	204457|Sphingomonadales	P	copper resistance	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4154979_4	1112214.AHIS01000036_gene1775	1.007e-177	571.0	COG1524@1|root,COG1524@2|Bacteria,1N5SF@1224|Proteobacteria,2TU7V@28211|Alphaproteobacteria,2K15Z@204457|Sphingomonadales	204457|Sphingomonadales	S	type I phosphodiesterase nucleotide pyrophosphatase	-	-	-	-	-	-	-	-	-	-	-	-	Phosphodiest
SRD3_k127_4154979_20	1112212.JH584235_gene1308	3.746e-80	269.0	COG2030@1|root,COG2030@2|Bacteria,1RIBV@1224|Proteobacteria,2U9QR@28211|Alphaproteobacteria,2K4JQ@204457|Sphingomonadales	204457|Sphingomonadales	I	dehydratase	-	-	-	-	-	-	-	-	-	-	-	-	MaoC_dehydratas
SRD3_k127_4154979_30	1112212.JH584235_gene1309	2.819e-39	159.0	28RMB@1|root,2ZE02@2|Bacteria,1P04A@1224|Proteobacteria,2UV0Q@28211|Alphaproteobacteria,2K50J@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4154979_25	1449049.JONW01000009_gene4619	4.765e-57	206.0	COG4798@1|root,COG4798@2|Bacteria,1RHGZ@1224|Proteobacteria,2U7R8@28211|Alphaproteobacteria,2KJUA@204458|Caulobacterales	204458|Caulobacterales	S	Methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4154979_18	1292034.OR37_01083	1.961e-87	301.0	COG3391@1|root,COG3391@2|Bacteria,1MWUF@1224|Proteobacteria,2U1IX@28211|Alphaproteobacteria	28211|Alphaproteobacteria	T	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4154979_15	1331060.RLDS_06895	4.69e-99	331.0	COG0605@1|root,COG0605@2|Bacteria,1R4Z3@1224|Proteobacteria,2U38P@28211|Alphaproteobacteria,2K37I@204457|Sphingomonadales	204457|Sphingomonadales	P	Iron/manganese superoxide dismutases, C-terminal domain	-	-	1.15.1.1	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	-	-	-	ko00000,ko00001,ko01000	-	-	-	Sod_Fe_C
SRD3_k127_4154979_32	1292034.OR37_01085	1.641e-38	150.0	COG0394@1|root,COG0394@2|Bacteria,1NJ22@1224|Proteobacteria,2UKSR@28211|Alphaproteobacteria	28211|Alphaproteobacteria	T	Low molecular weight phosphatase family	-	-	-	-	-	-	-	-	-	-	-	-	LMWPc
SRD3_k127_4154979_36	291985.CCSI01000006_gene1232	2.856e-16	86.0	2E8HV@1|root,2ZM2W@2|Bacteria,1PPS2@1224|Proteobacteria,2V276@28211|Alphaproteobacteria,2KAPI@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4154979_35	717785.HYPMC_1234	3.27e-17	96.0	COG2963@1|root,COG2963@2|Bacteria,1N24I@1224|Proteobacteria,2UGNR@28211|Alphaproteobacteria	28211|Alphaproteobacteria	L	transposase activity	-	-	-	-	-	-	-	-	-	-	-	-	HTH_23
SRD3_k127_4154979_17	1090319.KE386571_gene187	4.717e-92	305.0	COG0503@1|root,COG0503@2|Bacteria,1MVZ6@1224|Proteobacteria,2TV7J@28211|Alphaproteobacteria,2K25N@204457|Sphingomonadales	204457|Sphingomonadales	F	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis	apt	-	2.4.2.7	ko:K00759	ko00230,ko01100,map00230,map01100	-	R00190,R01229,R04378	RC00063	ko00000,ko00001,ko01000,ko04147	-	-	-	Pribosyltran
SRD3_k127_4154979_9	1112212.JH584235_gene1311	6.465e-134	430.0	COG2857@1|root,COG2857@2|Bacteria,1QFU2@1224|Proteobacteria,2TUHX@28211|Alphaproteobacteria,2K07X@204457|Sphingomonadales	204457|Sphingomonadales	C	Cytochrome c1	petC	-	-	ko:K00413	ko00190,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016	M00151,M00152	-	-	ko00000,ko00001,ko00002	-	-	-	Cytochrom_C1
SRD3_k127_4154979_0	1112216.JH594425_gene3611	6.179e-259	800.0	COG1290@1|root,COG1290@2|Bacteria,1MV97@1224|Proteobacteria,2TSZ3@28211|Alphaproteobacteria,2K0CE@204457|Sphingomonadales	204457|Sphingomonadales	C	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis	-	-	-	ko:K00412	ko00190,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016	M00151,M00152	-	-	ko00000,ko00001,ko00002,ko03029	-	-	-	Cytochrom_B_C,Cytochrome_B
SRD3_k127_4154979_14	1219049.SP5_018_00910	7.531e-107	347.0	COG0723@1|root,COG0723@2|Bacteria,1RAA2@1224|Proteobacteria,2TTT2@28211|Alphaproteobacteria,2K1YX@204457|Sphingomonadales	204457|Sphingomonadales	C	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis	petA	-	1.10.2.2	ko:K00411	ko00190,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016	M00151,M00152	-	-	ko00000,ko00001,ko00002,ko01000	-	-	-	Rieske,UCR_Fe-S_N
SRD3_k127_4154979_24	392499.Swit_1397	1.418e-62	219.0	COG0219@1|root,COG0219@2|Bacteria,1RCY4@1224|Proteobacteria,2U78W@28211|Alphaproteobacteria,2K57A@204457|Sphingomonadales	204457|Sphingomonadales	J	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide	trmL	-	2.1.1.207	ko:K03216	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	SpoU_methylase
SRD3_k127_4154979_7	1090318.ATTI01000001_gene2811	3.085e-149	524.0	COG0408@1|root,COG0408@2|Bacteria,1MWMF@1224|Proteobacteria,2TQNC@28211|Alphaproteobacteria,2K084@204457|Sphingomonadales	204457|Sphingomonadales	H	coproporphyrinogen III oxidase	hemF	-	1.3.3.3	ko:K00228	ko00860,ko01100,ko01110,map00860,map01100,map01110	M00121	R03220	RC00884	ko00000,ko00001,ko00002,ko01000	-	-	-	Coprogen_oxidas
SRD3_k127_4154979_21	1248760.ANFZ01000024_gene1685	8.537e-71	249.0	COG0454@1|root,COG0454@2|Bacteria,1RDGT@1224|Proteobacteria,2TRF5@28211|Alphaproteobacteria,2K22G@204457|Sphingomonadales	204457|Sphingomonadales	K	N-acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
SRD3_k127_4154979_27	1112214.AHIS01000036_gene1765	2.282e-55	209.0	29WPT@1|root,30IAR@2|Bacteria,1NDVR@1224|Proteobacteria,2UJ2P@28211|Alphaproteobacteria,2K5KW@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	GPDPase_memb
SRD3_k127_4154979_23	1112212.JH584235_gene1318	9.765e-64	229.0	2AKHH@1|root,31B9F@2|Bacteria,1Q71Y@1224|Proteobacteria,2VD5V@28211|Alphaproteobacteria,2K4BD@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	GPDPase_memb
SRD3_k127_4154979_13	1112216.JH594425_gene3618	7.626e-109	355.0	COG0321@1|root,COG0321@2|Bacteria,1MU6A@1224|Proteobacteria,2TRXJ@28211|Alphaproteobacteria,2K28T@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate	lipB	-	2.3.1.181	ko:K03801	ko00785,ko01100,map00785,map01100	-	R07766,R07769	RC00039,RC00992,RC02867	ko00000,ko00001,ko01000	-	-	-	BPL_LplA_LipB
SRD3_k127_4154979_19	1470591.BW41_01459	2.741e-80	273.0	2FE0D@1|root,3460K@2|Bacteria,1N3CI@1224|Proteobacteria,2UDQQ@28211|Alphaproteobacteria,2K1ZS@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4154979_12	1090320.KB900605_gene1519	1.565e-111	362.0	COG0602@1|root,COG0602@2|Bacteria,1MUJ2@1224|Proteobacteria,2TU1S@28211|Alphaproteobacteria,2K21H@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds	queE	-	4.3.99.3	ko:K10026	ko00790,ko01100,map00790,map01100	-	R10002	RC02989	ko00000,ko00001,ko01000,ko03016	-	-	-	Fer4_14,Radical_SAM
SRD3_k127_4154979_10	1112214.AHIS01000036_gene1759	3.118e-125	403.0	COG0603@1|root,COG0603@2|Bacteria,1MU5V@1224|Proteobacteria,2TU7F@28211|Alphaproteobacteria,2K0K0@204457|Sphingomonadales	204457|Sphingomonadales	F	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))	queC	-	6.3.4.20	ko:K06920	ko00790,ko01100,map00790,map01100	-	R09978	RC00959	ko00000,ko00001,ko01000,ko03016	-	-	-	QueC
SRD3_k127_4154979_29	1112212.JH584235_gene1324	8.083e-46	169.0	2AI43@1|root,318I3@2|Bacteria,1NCMB@1224|Proteobacteria,2UFPI@28211|Alphaproteobacteria,2K76K@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4154979_8	1112214.AHIS01000036_gene1757	3.867e-148	473.0	COG1281@1|root,COG1281@2|Bacteria,1MUMU@1224|Proteobacteria,2TTUR@28211|Alphaproteobacteria,2K0YD@204457|Sphingomonadales	204457|Sphingomonadales	O	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress	hslO	-	-	ko:K04083	-	-	-	-	ko00000,ko03110	-	-	-	HSP33
SRD3_k127_4154979_5	1379701.JPJC01000258_gene2673	2.05e-170	538.0	COG0078@1|root,COG0078@2|Bacteria,1MUFM@1224|Proteobacteria,2TR81@28211|Alphaproteobacteria,2K0CM@204457|Sphingomonadales	204457|Sphingomonadales	E	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline	argF	-	2.1.3.3	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	M00029,M00844	R01398	RC00096	ko00000,ko00001,ko00002,ko01000	-	-	-	OTCace,OTCace_N
SRD3_k127_4154979_1	1379701.JPJC01000258_gene2672	1.856e-228	711.0	COG4992@1|root,COG4992@2|Bacteria,1MV3C@1224|Proteobacteria,2TSGT@28211|Alphaproteobacteria,2K0I4@204457|Sphingomonadales	204457|Sphingomonadales	E	acetylornithine aminotransferase	argD	-	2.6.1.11,2.6.1.17	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00028,M00845	R02283,R04475	RC00006,RC00062	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3
SRD3_k127_4154979_11	194867.ALBQ01000059_gene3259	5.157e-125	416.0	COG1752@1|root,COG1752@2|Bacteria,1PWJ3@1224|Proteobacteria,2VCPE@28211|Alphaproteobacteria,2K1X4@204457|Sphingomonadales	204457|Sphingomonadales	S	Patatin-like phospholipase	-	-	-	-	-	-	-	-	-	-	-	-	Patatin
SRD3_k127_4154979_6	1112214.AHIS01000035_gene1072	5.193e-153	490.0	COG0842@1|root,COG0842@2|Bacteria,1MUH1@1224|Proteobacteria,2TQSY@28211|Alphaproteobacteria,2K23E@204457|Sphingomonadales	204457|Sphingomonadales	V	Transport permease protein	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane
SRD3_k127_4154979_34	1112214.AHIS01000035_gene1071	2.011e-31	123.0	COG5352@1|root,COG5352@2|Bacteria,1RHI6@1224|Proteobacteria,2TS7F@28211|Alphaproteobacteria,2K0A1@204457|Sphingomonadales	204457|Sphingomonadales	S	GcrA cell cycle regulator	-	-	-	ko:K13583	ko04112,map04112	-	-	-	ko00000,ko00001	-	-	-	GcrA
SRD3_k127_4179231_3	1380355.JNIJ01000010_gene1629	2.414e-42	160.0	COG1595@1|root,COG1595@2|Bacteria,1R44W@1224|Proteobacteria,2U1R0@28211|Alphaproteobacteria,3JVBC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2,SnoaL_2
SRD3_k127_4179231_2	1235457.C404_06240	3.169e-94	322.0	COG1752@1|root,COG1752@2|Bacteria,1MVHW@1224|Proteobacteria,2VHIT@28216|Betaproteobacteria,1K53R@119060|Burkholderiaceae	28216|Betaproteobacteria	S	PFAM Patatin	-	-	-	ko:K07001	-	-	-	-	ko00000	-	-	-	DUF3734,Patatin
SRD3_k127_4179231_1	1144319.PMI16_03352	5.445e-124	412.0	COG4689@1|root,COG4689@2|Bacteria,1N4IP@1224|Proteobacteria,2VKSS@28216|Betaproteobacteria,476RS@75682|Oxalobacteraceae	28216|Betaproteobacteria	H	Catalyzes the conversion of acetoacetate to acetone and carbon dioxide	adc	-	4.1.1.4	ko:K01574	ko00072,ko00640,ko01100,map00072,map00640,map01100	M00088	R01366	RC00040	ko00000,ko00001,ko00002,ko01000	-	-	-	ADC
SRD3_k127_4179231_0	1144342.PMI40_00074	1.962e-125	406.0	COG1028@1|root,COG1028@2|Bacteria,1MU5Y@1224|Proteobacteria,2VIKT@28216|Betaproteobacteria,472M1@75682|Oxalobacteraceae	28216|Betaproteobacteria	IQ	KR domain	bdhA	GO:0000003,GO:0000166,GO:0001568,GO:0001676,GO:0001944,GO:0003674,GO:0003824,GO:0004888,GO:0004930,GO:0004953,GO:0004954,GO:0004955,GO:0004957,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006636,GO:0006690,GO:0006692,GO:0006693,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007179,GO:0007186,GO:0007275,GO:0007276,GO:0007292,GO:0007565,GO:0007567,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009653,GO:0009719,GO:0009987,GO:0010033,GO:0016053,GO:0016404,GO:0016491,GO:0016614,GO:0016616,GO:0019372,GO:0019752,GO:0019953,GO:0022414,GO:0023052,GO:0030728,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0033559,GO:0035239,GO:0035295,GO:0036094,GO:0038023,GO:0042221,GO:0042759,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0045786,GO:0046394,GO:0046456,GO:0046983,GO:0048037,GO:0048514,GO:0048519,GO:0048523,GO:0048609,GO:0048731,GO:0048844,GO:0048856,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051287,GO:0051704,GO:0051716,GO:0051726,GO:0055114,GO:0060089,GO:0060840,GO:0065007,GO:0070013,GO:0070403,GO:0070493,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071559,GO:0071560,GO:0071704,GO:0072330,GO:0072358,GO:0072359,GO:0097070,GO:0097159,GO:1901265,GO:1901363,GO:1901568,GO:1901570,GO:1901576,GO:2001300,GO:2001301	1.1.1.30	ko:K00019	ko00072,ko00650,ko01100,map00072,map00650,map01100	M00088	R01361	RC00117	ko00000,ko00001,ko00002,ko01000	-	-	-	adh_short,adh_short_C2
SRD3_k127_4181502_1	1449076.JOOE01000002_gene990	2.472e-220	687.0	COG0840@1|root,COG1511@1|root,COG3437@1|root,COG5002@1|root,COG0840@2|Bacteria,COG1511@2|Bacteria,COG3437@2|Bacteria,COG5002@2|Bacteria,1R5EN@1224|Proteobacteria,2TWEB@28211|Alphaproteobacteria,2KEIX@204457|Sphingomonadales	204457|Sphingomonadales	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	CHASE3,GAF_2,HATPase_c,HisKA,Response_reg
SRD3_k127_4181502_0	1219035.NT2_12_01380	3.06e-225	739.0	COG0038@1|root,COG0517@1|root,COG0038@2|Bacteria,COG0517@2|Bacteria,1MV4K@1224|Proteobacteria,2TTBG@28211|Alphaproteobacteria,2K2S9@204457|Sphingomonadales	204457|Sphingomonadales	P	Chloride channel protein	-	-	-	-	-	-	-	-	-	-	-	-	CBS,Voltage_CLC
SRD3_k127_4181502_4	1219049.SP5_036_00150	2.654e-40	154.0	COG1846@1|root,COG1846@2|Bacteria,1N0KC@1224|Proteobacteria,2UC6T@28211|Alphaproteobacteria,2K53E@204457|Sphingomonadales	204457|Sphingomonadales	K	MarR family	-	-	-	-	-	-	-	-	-	-	-	-	MarR_2
SRD3_k127_4181502_3	392499.Swit_3154	9.362e-165	526.0	COG0626@1|root,COG0626@2|Bacteria,1MU57@1224|Proteobacteria,2TW14@28211|Alphaproteobacteria,2K963@204457|Sphingomonadales	204457|Sphingomonadales	E	Cys/Met metabolism PLP-dependent enzyme	-	-	2.5.1.48	ko:K01739	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	M00017	R00999,R01288,R02508,R03217,R03260,R04944,R04945,R04946	RC00020,RC00056,RC00069,RC00420,RC02848,RC02866	ko00000,ko00001,ko00002,ko01000	-	-	-	Cys_Met_Meta_PP
SRD3_k127_4181502_6	745310.G432_09745	9.512e-29	133.0	2AI6K@1|root,318KX@2|Bacteria,1P1HA@1224|Proteobacteria,2UV4H@28211|Alphaproteobacteria,2K74P@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4181502_5	595536.ADVE02000001_gene2362	9.184e-30	136.0	COG3920@1|root,COG3920@2|Bacteria,1MVPJ@1224|Proteobacteria,2TSSQ@28211|Alphaproteobacteria,36YUU@31993|Methylocystaceae	28211|Alphaproteobacteria	T	Histidine kinase-like ATPase domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF4118,HATPase_c,HATPase_c_2,HisKA_2,PAS_4,Response_reg
SRD3_k127_4181502_2	1112216.JH594425_gene242	1.014e-206	647.0	COG0467@1|root,COG0467@2|Bacteria,1NEWW@1224|Proteobacteria,2TRTV@28211|Alphaproteobacteria,2K1EN@204457|Sphingomonadales	204457|Sphingomonadales	T	Circadian clock protein KaiC	-	-	-	ko:K08482	-	-	-	-	ko00000	-	-	-	ATPase
SRD3_k127_419027_2	1112212.JH584235_gene2437	9.927e-214	670.0	COG0370@1|root,COG0370@2|Bacteria,1MUZC@1224|Proteobacteria,2TQSU@28211|Alphaproteobacteria,2K0AQ@204457|Sphingomonadales	204457|Sphingomonadales	P	Ferrous iron transport protein B	feoB	-	-	ko:K04759	-	-	-	-	ko00000,ko02000	9.A.8.1	-	-	FeoB_C,FeoB_N,Gate
SRD3_k127_419027_4	1112212.JH584235_gene2438	1.034e-82	280.0	COG0629@1|root,COG0629@2|Bacteria,1RCWT@1224|Proteobacteria,2U5BZ@28211|Alphaproteobacteria,2K464@204457|Sphingomonadales	204457|Sphingomonadales	L	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	-	-	-	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	-	-	-	ko00000,ko00001,ko03029,ko03032,ko03400	-	-	-	SSB
SRD3_k127_419027_0	1549858.MC45_14275	1.33e-231	730.0	COG2203@1|root,COG3920@1|root,COG2203@2|Bacteria,COG3920@2|Bacteria,1RGKE@1224|Proteobacteria,2TVMC@28211|Alphaproteobacteria,2K2VD@204457|Sphingomonadales	204457|Sphingomonadales	T	HWE histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	GAF,HWE_HK,PAS_3
SRD3_k127_419027_6	1112212.JH584235_gene2440	1.124e-44	177.0	COG0784@1|root,COG0784@2|Bacteria,1N1PX@1224|Proteobacteria,2UF6V@28211|Alphaproteobacteria,2K7GV@204457|Sphingomonadales	204457|Sphingomonadales	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
SRD3_k127_419027_3	1112216.JH594425_gene1006	2.642e-100	332.0	COG0500@1|root,COG2226@2|Bacteria,1MVSY@1224|Proteobacteria,2TTNQ@28211|Alphaproteobacteria,2K0KH@204457|Sphingomonadales	204457|Sphingomonadales	Q	Methionine biosynthesis protein MetW	metW	-	-	-	-	-	-	-	-	-	-	-	MetW
SRD3_k127_419027_5	1123269.NX02_07500	1.939e-51	188.0	COG0454@1|root,COG0454@2|Bacteria,1RIFC@1224|Proteobacteria,2UDE0@28211|Alphaproteobacteria,2KEPV@204457|Sphingomonadales	204457|Sphingomonadales	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10
SRD3_k127_419027_1	1112216.JH594425_gene1008	8.535e-217	679.0	COG2021@1|root,COG2021@2|Bacteria,1MVJV@1224|Proteobacteria,2TQYA@28211|Alphaproteobacteria,2JZX2@204457|Sphingomonadales	204457|Sphingomonadales	E	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine	metXA	-	2.3.1.31	ko:K00641	ko00270,ko01100,ko01130,map00270,map01100,map01130	-	R01776	RC00004,RC00041	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1
SRD3_k127_4220748_0	1112216.JH594425_gene3227	3.866e-264	825.0	COG0475@1|root,COG1226@1|root,COG0475@2|Bacteria,COG1226@2|Bacteria,1MV34@1224|Proteobacteria,2TRC5@28211|Alphaproteobacteria,2K1PS@204457|Sphingomonadales	204457|Sphingomonadales	P	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family	-	-	-	ko:K03455,ko:K11747	-	-	-	-	ko00000,ko02000	2.A.37,2.A.37.1.2	-	-	Na_H_Exchanger,TrkA_N
SRD3_k127_4220748_4	1112212.JH584235_gene1088	1.173e-70	242.0	COG0822@1|root,COG0822@2|Bacteria,1RDGB@1224|Proteobacteria,2U74A@28211|Alphaproteobacteria,2K54B@204457|Sphingomonadales	204457|Sphingomonadales	C	NifU homolog involved in Fe-S cluster formation	-	-	-	-	-	-	-	-	-	-	-	-	NifU_N
SRD3_k127_4220748_3	1112214.AHIS01000098_gene1458	1.704e-80	273.0	COG1286@1|root,COG1286@2|Bacteria,1REF7@1224|Proteobacteria,2VA4D@28211|Alphaproteobacteria,2K52S@204457|Sphingomonadales	204457|Sphingomonadales	S	Colicin V production protein	-	-	-	ko:K03558	-	-	-	-	ko00000	-	-	-	Colicin_V
SRD3_k127_4220748_1	1549858.MC45_01655	3.358e-258	799.0	COG1066@1|root,COG1066@2|Bacteria,1MUJQ@1224|Proteobacteria,2TS6F@28211|Alphaproteobacteria,2K1F3@204457|Sphingomonadales	204457|Sphingomonadales	O	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function	radA	-	-	ko:K04485	-	-	-	-	ko00000,ko03400	-	-	-	AAA_25,ATPase,ChlI
SRD3_k127_4220748_2	1248917.ANFX01000034_gene657	4.785e-163	534.0	COG0457@1|root,COG0457@2|Bacteria,1MVMG@1224|Proteobacteria,2TSGE@28211|Alphaproteobacteria,2K04M@204457|Sphingomonadales	204457|Sphingomonadales	S	Sulfotransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Sulfotransfer_3,TPR_16,TPR_19,TPR_8
SRD3_k127_4220748_5	1112212.JH584235_gene3542	7.05e-48	183.0	2E7B7@1|root,331UM@2|Bacteria,1N6KN@1224|Proteobacteria,2UD50@28211|Alphaproteobacteria,2K5JV@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4240856_1	981384.AEYW01000004_gene1810	7.817e-71	250.0	COG0644@1|root,COG0644@2|Bacteria,1R41S@1224|Proteobacteria,2TW03@28211|Alphaproteobacteria,4ND7V@97050|Ruegeria	28211|Alphaproteobacteria	C	Tryptophan halogenase	-	-	1.14.19.9	ko:K14266	ko00404,ko01130,map00404,map01130	M00789,M00790	R09570	RC00949	ko00000,ko00001,ko00002,ko01000	-	-	-	Trp_halogenase
SRD3_k127_4240856_2	13689.BV96_00419	0.000738	50.0	COG3128@1|root,COG3128@2|Bacteria,1MYBT@1224|Proteobacteria,2TW4H@28211|Alphaproteobacteria,2K42U@204457|Sphingomonadales	204457|Sphingomonadales	S	Prolyl 4-hydroxylase alpha subunit homologues.	-	-	-	ko:K07336	-	-	-	-	ko00000,ko01000	-	-	-	2OG-FeII_Oxy_3
SRD3_k127_4240856_0	595536.ADVE02000001_gene3312	3.146e-108	374.0	COG0367@1|root,COG0367@2|Bacteria,1NRC4@1224|Proteobacteria,2UPNE@28211|Alphaproteobacteria	28211|Alphaproteobacteria	E	Asparagine synthase	-	-	6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	-	R00578	RC00010	ko00000,ko00001,ko01000,ko01002	-	-	-	Asn_synthase
SRD3_k127_4248037_12	1112214.AHIS01000047_gene2086	1.832e-08	56.0	29B62@1|root,2ZY4F@2|Bacteria,1PKJN@1224|Proteobacteria,2UZ8X@28211|Alphaproteobacteria,2K8BW@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4248037_1	1112212.JH584235_gene2581	6.527e-280	876.0	COG2303@1|root,COG2303@2|Bacteria,1MV19@1224|Proteobacteria,2TQKQ@28211|Alphaproteobacteria,2K0FF@204457|Sphingomonadales	204457|Sphingomonadales	E	Belongs to the GMC oxidoreductase family	-	-	-	-	-	-	-	-	-	-	-	-	GMC_oxred_C,GMC_oxred_N,Lycopene_cycl
SRD3_k127_4248037_2	1112212.JH584235_gene2580	3.223e-170	538.0	COG3000@1|root,COG3000@2|Bacteria,1NR7X@1224|Proteobacteria,2TT68@28211|Alphaproteobacteria,2K2GA@204457|Sphingomonadales	204457|Sphingomonadales	I	sterol desaturase	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
SRD3_k127_4248037_8	1112212.JH584235_gene2579	5.588e-41	155.0	2AK0A@1|root,31G6X@2|Bacteria,1Q7JP@1224|Proteobacteria,2VDR1@28211|Alphaproteobacteria,2K5SG@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4248037_4	1112214.AHIS01000047_gene2082	2.506e-56	205.0	COG3453@1|root,COG3453@2|Bacteria,1N9AF@1224|Proteobacteria,2UD2M@28211|Alphaproteobacteria,2K56H@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	DUF442
SRD3_k127_4248037_0	1112214.AHIS01000047_gene2081	1.549e-320	987.0	COG0514@1|root,COG0514@2|Bacteria,1MVGG@1224|Proteobacteria,2TS8B@28211|Alphaproteobacteria,2K0QS@204457|Sphingomonadales	204457|Sphingomonadales	L	DNA helicase	recQ	-	3.6.4.12	ko:K03654	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,HRDC,Helicase_C,RQC,RecQ_Zn_bind
SRD3_k127_4248037_3	1123269.NX02_10565	4.302e-60	210.0	COG0346@1|root,COG0346@2|Bacteria,1RGTU@1224|Proteobacteria,2U9R1@28211|Alphaproteobacteria,2K6I5@204457|Sphingomonadales	204457|Sphingomonadales	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
SRD3_k127_4248037_7	876269.ARWA01000001_gene1233	1.045e-43	166.0	2CYEB@1|root,32T42@2|Bacteria,1MVVN@1224|Proteobacteria,2U2YY@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4248037_6	1449065.JMLL01000011_gene2004	2.757e-47	173.0	2D8VC@1|root,32TS1@2|Bacteria,1MZWT@1224|Proteobacteria,2UEVN@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4248037_5	13689.BV96_02875	4.818e-52	193.0	COG0789@1|root,COG0789@2|Bacteria,1N0AZ@1224|Proteobacteria,2UAMD@28211|Alphaproteobacteria,2K572@204457|Sphingomonadales	204457|Sphingomonadales	K	helix_turn_helix, mercury resistance	-	-	-	ko:K08365	-	-	-	-	ko00000,ko03000	-	-	-	MerR,MerR-DNA-bind,MerR_1
SRD3_k127_4248037_9	1550073.JROH01000008_gene1757	4.086e-25	107.0	COG2161@1|root,COG2161@2|Bacteria,1N6X6@1224|Proteobacteria,2UFED@28211|Alphaproteobacteria,2K6QP@204457|Sphingomonadales	204457|Sphingomonadales	D	Antitoxin component of a toxin-antitoxin (TA) module	-	-	-	ko:K19159	-	-	-	-	ko00000,ko02048	-	-	-	PhdYeFM_antitox
SRD3_k127_4248037_10	314265.R2601_00930	5.183e-24	108.0	COG4115@1|root,COG4115@2|Bacteria,1MZBP@1224|Proteobacteria,2UH32@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Protein conserved in bacteria	yoeB	-	-	ko:K19158	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	YoeB_toxin
SRD3_k127_4248037_11	460265.Mnod_3104	5.509e-10	65.0	COG3945@1|root,COG3945@2|Bacteria,1NX3S@1224|Proteobacteria,2U1MQ@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Pfam Hemerythrin HHE cation binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Hemerythrin
SRD3_k127_4252786_4	1112212.JH584235_gene3278	1.819e-42	159.0	COG2808@1|root,COG2808@2|Bacteria,1N1B9@1224|Proteobacteria,2U5JV@28211|Alphaproteobacteria,2K2BS@204457|Sphingomonadales	204457|Sphingomonadales	K	Putative FMN-binding domain	-	-	-	ko:K07734	-	-	-	-	ko00000,ko03000	-	-	-	FMN_bind_2
SRD3_k127_4252786_3	1112216.JH594425_gene1660	2.285e-94	317.0	COG0546@1|root,COG0546@2|Bacteria,1RDA7@1224|Proteobacteria,2U703@28211|Alphaproteobacteria,2K3XQ@204457|Sphingomonadales	204457|Sphingomonadales	S	Hydrolase	-	-	3.1.3.18	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	-	R01334	RC00017	ko00000,ko00001,ko01000	-	-	-	HAD_2
SRD3_k127_4252786_5	1112214.AHIS01000009_gene157	4.237e-19	91.0	2A2BG@1|root,30QNE@2|Bacteria,1PKSQ@1224|Proteobacteria,2UZEJ@28211|Alphaproteobacteria,2K8B6@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4252786_2	1112216.JH594425_gene1662	5.731e-106	348.0	COG5387@1|root,COG5387@2|Bacteria,1Q3B5@1224|Proteobacteria,2TVK1@28211|Alphaproteobacteria,2K1FD@204457|Sphingomonadales	204457|Sphingomonadales	O	Chaperone required for the assembly of the mitochondrial F1-ATPase	-	-	-	-	-	-	-	-	-	-	-	-	ATP12
SRD3_k127_4252786_1	1550073.JROH01000054_gene3290	2.226e-106	349.0	COG0194@1|root,COG0194@2|Bacteria,1MW92@1224|Proteobacteria,2TSCQ@28211|Alphaproteobacteria,2K16A@204457|Sphingomonadales	204457|Sphingomonadales	F	Essential for recycling GMP and indirectly, cGMP	gmk	-	2.7.4.8	ko:K00942	ko00230,ko01100,map00230,map01100	M00050	R00332,R02090	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_kin
SRD3_k127_4252786_6	1112212.JH584235_gene3273	5.796e-18	86.0	2BHYD@1|root,32C2N@2|Bacteria,1Q81T@1224|Proteobacteria,2VE7E@28211|Alphaproteobacteria,2K751@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4252786_0	452662.SJA_C1-15580	2.075e-254	789.0	COG0114@1|root,COG0114@2|Bacteria,1MUQI@1224|Proteobacteria,2TQM7@28211|Alphaproteobacteria,2K0K7@204457|Sphingomonadales	204457|Sphingomonadales	C	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate	fumC	-	4.2.1.2	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	M00009,M00011,M00173,M00376	R01082	RC00443	ko00000,ko00001,ko00002,ko01000	-	-	-	FumaraseC_C,Lyase_1
SRD3_k127_4256722_3	1379701.JPJC01000280_gene2500	6.065e-164	522.0	COG1092@1|root,COG1092@2|Bacteria,1QSD4@1224|Proteobacteria,2TUFT@28211|Alphaproteobacteria,2K037@204457|Sphingomonadales	204457|Sphingomonadales	J	Belongs to the methyltransferase superfamily	-	-	2.1.1.191	ko:K06969	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltrans_SAM
SRD3_k127_4256722_1	1549858.MC45_15335	1.246e-247	769.0	COG0498@1|root,COG0498@2|Bacteria,1MUWQ@1224|Proteobacteria,2TT0D@28211|Alphaproteobacteria,2K0KX@204457|Sphingomonadales	204457|Sphingomonadales	E	Threonine synthase	thrC	-	4.2.3.1	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	M00018	R01466,R05086	RC00017,RC00526	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP,Thr_synth_N
SRD3_k127_4256722_9	1112212.JH584235_gene1986	2.101e-86	295.0	COG3346@1|root,COG3346@2|Bacteria,1RIJQ@1224|Proteobacteria,2UA1G@28211|Alphaproteobacteria,2K34C@204457|Sphingomonadales	204457|Sphingomonadales	S	SURF1-like protein	-	-	-	ko:K14998	-	-	-	-	ko00000,ko03029	3.D.4.8	-	-	SURF1
SRD3_k127_4256722_11	13689.BV96_04177	8.833e-37	144.0	COG5349@1|root,COG5349@2|Bacteria,1N0WU@1224|Proteobacteria,2UCE7@28211|Alphaproteobacteria,2K61Z@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF983)	-	-	-	-	-	-	-	-	-	-	-	-	DUF983
SRD3_k127_4256722_10	1449076.JOOE01000004_gene132	1.615e-82	276.0	COG2329@1|root,COG2329@2|Bacteria,1RAC6@1224|Proteobacteria,2U59M@28211|Alphaproteobacteria,2K594@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF3291)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3291
SRD3_k127_4256722_2	1379701.JPJC01000280_gene2504	5.009e-170	537.0	COG1845@1|root,COG1845@2|Bacteria,1MUCK@1224|Proteobacteria,2TQWA@28211|Alphaproteobacteria,2JZW3@204457|Sphingomonadales	204457|Sphingomonadales	C	Heme copper-type cytochrome quinol oxidase, subunit 3	ctaE	-	1.9.3.1	ko:K02276	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.4,3.D.4.6	-	-	COX3
SRD3_k127_4256722_8	1379701.JPJC01000280_gene2505	2.97e-96	318.0	COG3175@1|root,COG3175@2|Bacteria,1RDTU@1224|Proteobacteria,2U6ZT@28211|Alphaproteobacteria,2K3WU@204457|Sphingomonadales	204457|Sphingomonadales	O	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I	ctaG	-	-	ko:K02258	ko00190,ko01100,ko04714,map00190,map01100,map04714	M00154	-	-	ko00000,ko00001,ko00002,ko03029	3.D.4.8	-	-	CtaG_Cox11
SRD3_k127_4256722_5	1090320.KB900605_gene1349	1.369e-148	479.0	COG0109@1|root,COG0109@2|Bacteria,1MW3S@1224|Proteobacteria,2TRD8@28211|Alphaproteobacteria,2K01V@204457|Sphingomonadales	204457|Sphingomonadales	O	Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group	ctaB	-	2.5.1.141	ko:K02257	ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714	M00154	R07411	RC01786	ko00000,ko00001,ko00002,ko01000,ko01006,ko03029	-	-	-	UbiA
SRD3_k127_4256722_0	1112212.JH584235_gene1980	0.0	1042.0	COG0843@1|root,COG0843@2|Bacteria,1MU7S@1224|Proteobacteria,2TQP1@28211|Alphaproteobacteria,2K034@204457|Sphingomonadales	204457|Sphingomonadales	C	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B	ctaD	-	1.9.3.1	ko:K02274	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.2,3.D.4.3,3.D.4.4,3.D.4.6	-	-	COX1
SRD3_k127_4256722_4	1112214.AHIS01000043_gene1866	3.199e-152	489.0	COG1622@1|root,COG1622@2|Bacteria,1MWHZ@1224|Proteobacteria,2TRK6@28211|Alphaproteobacteria,2K00C@204457|Sphingomonadales	204457|Sphingomonadales	C	Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)	ctaC	-	1.9.3.1	ko:K02275	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.2,3.D.4.4,3.D.4.6	-	-	COX2,COX2_TM
SRD3_k127_4256722_7	1112212.JH584235_gene1978	2.296e-97	331.0	COG0461@1|root,COG0461@2|Bacteria,1RIC5@1224|Proteobacteria,2TUX2@28211|Alphaproteobacteria,2K1QD@204457|Sphingomonadales	204457|Sphingomonadales	F	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)	pyrE	-	2.4.2.10	ko:K00762	ko00240,ko01100,map00240,map01100	M00051	R01870	RC00611	ko00000,ko00001,ko00002,ko01000	-	-	-	Pribosyltran
SRD3_k127_4256722_6	1549858.MC45_15395	1.361e-128	419.0	COG0854@1|root,COG0854@2|Bacteria,1MU9W@1224|Proteobacteria,2TTTF@28211|Alphaproteobacteria,2K0T4@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate	pdxJ	-	2.6.99.2	ko:K03474	ko00750,ko01100,map00750,map01100	M00124	R05838	RC01476	ko00000,ko00001,ko00002,ko01000	-	-	-	PdxJ
SRD3_k127_4312558_5	1470591.BW41_00001	3.275e-43	161.0	COG2017@1|root,COG2017@2|Bacteria,1MVMN@1224|Proteobacteria,2TTJ7@28211|Alphaproteobacteria,2K9AP@204457|Sphingomonadales	204457|Sphingomonadales	G	Converts alpha-aldose to the beta-anomer	-	-	5.1.3.3	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	M00632	R01602,R10619	RC00563	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldose_epim
SRD3_k127_4312558_3	1090318.ATTI01000001_gene1421	5.701e-133	434.0	COG2850@1|root,COG2850@2|Bacteria,1MUAC@1224|Proteobacteria,2TSG2@28211|Alphaproteobacteria,2K0V1@204457|Sphingomonadales	204457|Sphingomonadales	S	A domain family that is part of the cupin metalloenzyme superfamily.	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_8
SRD3_k127_4312558_1	1470591.BW41_01786	3.237e-256	800.0	COG0644@1|root,COG0644@2|Bacteria,1R41S@1224|Proteobacteria,2TW03@28211|Alphaproteobacteria,2KE9W@204457|Sphingomonadales	204457|Sphingomonadales	C	Tryptophan halogenase	-	-	1.14.19.9	ko:K14266	ko00404,ko01130,map00404,map01130	M00789,M00790	R09570	RC00949	ko00000,ko00001,ko00002,ko01000	-	-	-	Trp_halogenase
SRD3_k127_4312558_0	1470591.BW41_01785	2.751e-270	845.0	COG0665@1|root,COG0665@2|Bacteria,1MU40@1224|Proteobacteria,2TTKE@28211|Alphaproteobacteria,2JZZ7@204457|Sphingomonadales	204457|Sphingomonadales	E	Tryptophan halogenase	-	-	1.14.19.9	ko:K14266	ko00404,ko01130,map00404,map01130	M00789,M00790	R09570	RC00949	ko00000,ko00001,ko00002,ko01000	-	-	-	Trp_halogenase
SRD3_k127_4312558_2	1112216.JH594425_gene373	4.525e-165	533.0	COG0665@1|root,COG0665@2|Bacteria,1MU40@1224|Proteobacteria,2TTKE@28211|Alphaproteobacteria,2K2T2@204457|Sphingomonadales	204457|Sphingomonadales	E	Tryptophan halogenase	-	-	1.14.19.9	ko:K14266	ko00404,ko01130,map00404,map01130	M00789,M00790	R09570	RC00949	ko00000,ko00001,ko00002,ko01000	-	-	-	Trp_halogenase
SRD3_k127_4312558_4	1470591.BW41_01308	1.063e-84	286.0	COG0446@1|root,COG0446@2|Bacteria,1Q0P8@1224|Proteobacteria,2U4CV@28211|Alphaproteobacteria,2KEGY@204457|Sphingomonadales	204457|Sphingomonadales	S	Tryptophan halogenase	-	-	1.14.19.9	ko:K14266	ko00404,ko01130,map00404,map01130	M00789,M00790	R09570	RC00949	ko00000,ko00001,ko00002,ko01000	-	-	-	Trp_halogenase
SRD3_k127_4373220_2	1121022.ABENE_03600	1.057e-10	66.0	2BRDH@1|root,32KC9@2|Bacteria,1NXTM@1224|Proteobacteria,2UTEH@28211|Alphaproteobacteria,2KJMY@204458|Caulobacterales	204458|Caulobacterales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4373220_0	1112212.JH584235_gene1118	3.715e-110	364.0	COG5285@1|root,COG5285@2|Bacteria	2|Bacteria	Q	dioxygenase activity	-	-	-	-	-	-	-	-	-	-	-	-	PhyH
SRD3_k127_4392280_6	1112212.JH584235_gene1827	1.576e-23	100.0	COG0596@1|root,COG0596@2|Bacteria,1MUSF@1224|Proteobacteria,2TSK5@28211|Alphaproteobacteria,2K0B4@204457|Sphingomonadales	204457|Sphingomonadales	S	Serine aminopeptidase, S33	dhmA	-	3.8.1.5	ko:K01563	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	-	R05284,R05367,R05368,R05369,R05370,R07669,R07670	RC01317,RC01340,RC01341,RC02013	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1
SRD3_k127_4392280_3	1112212.JH584235_gene2538	2.949e-143	460.0	COG1262@1|root,COG1262@2|Bacteria,1MZ25@1224|Proteobacteria,2TRJH@28211|Alphaproteobacteria,2K020@204457|Sphingomonadales	204457|Sphingomonadales	S	Sulfatase-modifying factor enzyme 1	pkn1	-	-	-	-	-	-	-	-	-	-	-	FGE-sulfatase
SRD3_k127_4392280_5	1112216.JH594425_gene1299	2.661e-57	205.0	COG0801@1|root,COG0801@2|Bacteria,1MZH8@1224|Proteobacteria,2U8D6@28211|Alphaproteobacteria,2K57H@204457|Sphingomonadales	204457|Sphingomonadales	H	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase	folK	-	2.7.6.3	ko:K00950	ko00790,ko01100,map00790,map01100	M00126,M00841	R03503	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	HPPK
SRD3_k127_4392280_4	1112214.AHIS01000047_gene2180	4.565e-116	376.0	COG1573@1|root,COG1573@2|Bacteria,1MW91@1224|Proteobacteria,2TSUP@28211|Alphaproteobacteria,2K0J4@204457|Sphingomonadales	204457|Sphingomonadales	L	Uracil-DNA glycosylase	-	-	3.2.2.27	ko:K21929	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	UDG
SRD3_k127_4392280_1	555793.WSK_3691	4.263e-232	727.0	COG1116@1|root,COG4754@1|root,COG1116@2|Bacteria,COG4754@2|Bacteria,1MUDV@1224|Proteobacteria,2TRXZ@28211|Alphaproteobacteria,2K2US@204457|Sphingomonadales	204457|Sphingomonadales	P	ABC transporter related	-	-	-	ko:K02049	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	AAA_assoc_C,ABC_tran
SRD3_k127_4392280_0	555793.WSK_3690	1.4e-289	899.0	COG4986@1|root,COG4986@2|Bacteria,1MV85@1224|Proteobacteria,2TTRP@28211|Alphaproteobacteria,2K0Z2@204457|Sphingomonadales	204457|Sphingomonadales	P	binding-protein-dependent transport systems inner membrane component	-	-	-	ko:K02050	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	BPD_transp_1
SRD3_k127_4392280_2	1081640.AGFU01000005_gene1045	6.889e-148	471.0	COG3637@1|root,COG3637@2|Bacteria,1MZ5U@1224|Proteobacteria,2TWHF@28211|Alphaproteobacteria,2K304@204457|Sphingomonadales	204457|Sphingomonadales	M	Carbohydrate-selective porin, OprB family	-	-	-	ko:K16080	-	-	-	-	ko00000,ko02000	1.B.4.2.2	-	-	OprB
SRD3_k127_4425629_9	1112212.JH584235_gene2076	3.397e-24	105.0	COG1738@1|root,COG1738@2|Bacteria,1RJV6@1224|Proteobacteria,2U7IX@28211|Alphaproteobacteria,2K2CH@204457|Sphingomonadales	204457|Sphingomonadales	S	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage	-	-	-	ko:K09125	-	-	-	-	ko00000	-	-	-	Vut_1
SRD3_k127_4425629_3	1219049.SP5_063_00030	2.492e-201	634.0	COG1972@1|root,COG1972@2|Bacteria,1MXXX@1224|Proteobacteria,2TU8A@28211|Alphaproteobacteria,2K07T@204457|Sphingomonadales	204457|Sphingomonadales	F	nucleoside	-	-	-	ko:K03317	-	-	-	-	ko00000	2.A.41	-	-	Gate,Nucleos_tra2_C,Nucleos_tra2_N
SRD3_k127_4425629_7	745310.G432_02420	5.588e-67	234.0	COG0586@1|root,COG0586@2|Bacteria,1R5SJ@1224|Proteobacteria,2UG7E@28211|Alphaproteobacteria,2K45A@204457|Sphingomonadales	204457|Sphingomonadales	S	SNARE associated Golgi protein	-	-	-	-	-	-	-	-	-	-	-	-	SNARE_assoc
SRD3_k127_4425629_8	685778.AORL01000004_gene3554	2.203e-61	214.0	COG1733@1|root,COG1733@2|Bacteria,1RHQK@1224|Proteobacteria,2UAWX@28211|Alphaproteobacteria,2K5BC@204457|Sphingomonadales	204457|Sphingomonadales	K	HxlR-like helix-turn-helix	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
SRD3_k127_4425629_6	685778.AORL01000004_gene3553	5.002e-108	356.0	COG0300@1|root,COG0300@2|Bacteria,1MWNZ@1224|Proteobacteria,2TTFS@28211|Alphaproteobacteria,2K3FE@204457|Sphingomonadales	204457|Sphingomonadales	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	ko:K07124	-	-	-	-	ko00000	-	-	-	adh_short
SRD3_k127_4425629_4	1123073.KB899242_gene1046	8.638e-177	564.0	COG0436@1|root,COG0436@2|Bacteria,1MX43@1224|Proteobacteria,1RZ0G@1236|Gammaproteobacteria,1X8D1@135614|Xanthomonadales	135614|Xanthomonadales	E	Aminotransferase class I and II	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_1_2
SRD3_k127_4425629_1	1081640.AGFU01000025_gene2525	5e-324	1004.0	COG3590@1|root,COG3590@2|Bacteria,1MVNQ@1224|Proteobacteria,2TRU4@28211|Alphaproteobacteria,2K02W@204457|Sphingomonadales	204457|Sphingomonadales	O	peptidase M13	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M13,Peptidase_M13_N
SRD3_k127_4425629_2	883078.HMPREF9695_03789	8.789e-269	846.0	COG3829@1|root,COG4191@1|root,COG3829@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TQQ9@28211|Alphaproteobacteria,3JR0R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Response regulator receiver	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,MHYT,PAS_3,PAS_9,Response_reg
SRD3_k127_4425629_0	1449076.JOOE01000006_gene663	0.0	1049.0	28IIY@1|root,2Z8JY@2|Bacteria,1NRU9@1224|Proteobacteria,2UPN0@28211|Alphaproteobacteria,2K1IH@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4425629_5	349521.HCH_01981	4.227e-119	393.0	COG3961@1|root,COG3961@2|Bacteria,1MW2F@1224|Proteobacteria,1RQFY@1236|Gammaproteobacteria	1236|Gammaproteobacteria	GH	Belongs to the TPP enzyme family	ipdC	-	4.1.1.1,4.1.1.74	ko:K01568,ko:K04103	ko00010,ko00380,ko01100,ko01110,ko01130,map00010,map00380,map01100,map01110,map01130	-	R00014,R00755,R01974	RC00027,RC00375,RC00506,RC02744	ko00000,ko00001,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
SRD3_k127_4438081_0	1090320.KB900605_gene2093	1.365e-190	611.0	COG1629@1|root,COG4773@1|root,COG1629@2|Bacteria,COG4773@2|Bacteria,1R479@1224|Proteobacteria,2TV3V@28211|Alphaproteobacteria,2K147@204457|Sphingomonadales	204457|Sphingomonadales	P	COG1629 Outer membrane receptor proteins, mostly Fe transport	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SRD3_k127_4447454_6	1549858.MC45_07060	1.375e-54	195.0	COG3749@1|root,COG3749@2|Bacteria,1RJR9@1224|Proteobacteria,2UA02@28211|Alphaproteobacteria,2K4PM@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	DUF934
SRD3_k127_4447454_0	1449076.JOOE01000001_gene2415	2e-323	992.0	COG0155@1|root,COG0155@2|Bacteria,1MVVB@1224|Proteobacteria,2TRCR@28211|Alphaproteobacteria,2K14A@204457|Sphingomonadales	204457|Sphingomonadales	C	Sulfite reductase	cysI	-	1.8.1.2	ko:K00381	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00176	R00858	RC00065	ko00000,ko00001,ko00002,ko01000	-	-	-	NIR_SIR,NIR_SIR_ferr
SRD3_k127_4447454_7	1112212.JH584235_gene1355	1.608e-49	181.0	2EG12@1|root,339T3@2|Bacteria,1NGID@1224|Proteobacteria,2UK0A@28211|Alphaproteobacteria,2K5XT@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF2849)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2849
SRD3_k127_4447454_4	1112212.JH584235_gene1354	2.089e-152	484.0	COG0007@1|root,COG0007@2|Bacteria,1MUI0@1224|Proteobacteria,2TRJC@28211|Alphaproteobacteria,2K1SG@204457|Sphingomonadales	204457|Sphingomonadales	H	Belongs to the precorrin methyltransferase family	cysG	-	2.1.1.107	ko:K02303	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R03194	RC00003,RC00871	ko00000,ko00001,ko00002,ko01000	-	-	-	TP_methylase
SRD3_k127_4447454_3	1470591.BW41_00618	1.294e-179	572.0	COG3934@1|root,COG3934@2|Bacteria,1N159@1224|Proteobacteria,2U2MT@28211|Alphaproteobacteria,2K3QY@204457|Sphingomonadales	204457|Sphingomonadales	G	Belongs to the glycosyl hydrolase 5 (cellulase A) family	-	-	-	-	-	-	-	-	-	-	-	-	Cellulase
SRD3_k127_4447454_5	1144307.PMI04_00640	1.684e-79	268.0	COG1680@1|root,COG1680@2|Bacteria,1RJKW@1224|Proteobacteria,2UHBN@28211|Alphaproteobacteria	28211|Alphaproteobacteria	V	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
SRD3_k127_4447454_8	715226.ABI_09250	4.352e-18	95.0	COG3735@1|root,COG3735@2|Bacteria,1MVCW@1224|Proteobacteria,2U5RA@28211|Alphaproteobacteria,2KGAW@204458|Caulobacterales	204458|Caulobacterales	S	PFAM GumN family protein	-	-	-	ko:K09973	-	-	-	-	ko00000	-	-	-	TraB
SRD3_k127_4447454_10	452662.SJA_C2-01760	0.0001212	48.0	2AG03@1|root,31644@2|Bacteria,1P94D@1224|Proteobacteria,2UW9J@28211|Alphaproteobacteria,2KBWX@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4447454_9	395964.KE386496_gene1422	6.625e-15	79.0	COG2010@1|root,COG2010@2|Bacteria,1NDXD@1224|Proteobacteria,2UHZ2@28211|Alphaproteobacteria	28211|Alphaproteobacteria	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,Cytochrome_CBB3
SRD3_k127_4447454_1	1112214.AHIS01000033_gene1106	1.596e-259	805.0	COG1012@1|root,COG1012@2|Bacteria,1MV2I@1224|Proteobacteria,2TU8S@28211|Alphaproteobacteria,2K13M@204457|Sphingomonadales	204457|Sphingomonadales	C	Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate	astD	-	1.2.1.71	ko:K06447	ko00330,ko01100,map00330,map01100	-	R05049	RC00080	ko00000,ko00001,ko01000	-	-	-	Aldedh
SRD3_k127_4447454_2	1112214.AHIS01000033_gene1107	3.395e-180	569.0	COG0397@1|root,COG0397@2|Bacteria,1MVK3@1224|Proteobacteria,2TT84@28211|Alphaproteobacteria,2JZUT@204457|Sphingomonadales	204457|Sphingomonadales	S	Uncharacterized ACR, YdiU/UPF0061 family	-	-	-	-	-	-	-	-	-	-	-	-	UPF0061
SRD3_k127_4488593_1	1112212.JH584235_gene3630	3.032e-239	742.0	COG1160@1|root,COG1160@2|Bacteria,1MU9S@1224|Proteobacteria,2TT38@28211|Alphaproteobacteria,2K0SQ@204457|Sphingomonadales	204457|Sphingomonadales	S	GTPase that plays an essential role in the late steps of ribosome biogenesis	der	-	-	ko:K03977	-	-	-	-	ko00000,ko03009	-	-	-	KH_dom-like,MMR_HSR1
SRD3_k127_4488593_6	1112212.JH584235_gene3631	3.311e-61	214.0	COG2198@1|root,COG2198@2|Bacteria,1NMJT@1224|Proteobacteria,2UQPF@28211|Alphaproteobacteria,2K588@204457|Sphingomonadales	204457|Sphingomonadales	T	Hpt domain	-	-	-	ko:K20976	ko02020,ko02025,map02020,map02025	M00820	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Hpt
SRD3_k127_4488593_0	1112212.JH584235_gene3632	9.26e-279	876.0	COG1196@1|root,COG1196@2|Bacteria,1MVEP@1224|Proteobacteria,2TR50@28211|Alphaproteobacteria,2K0N2@204457|Sphingomonadales	204457|Sphingomonadales	D	nuclear chromosome segregation	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4488593_9	1112212.JH584235_gene3633	1.116e-35	137.0	2AFMU@1|root,315P6@2|Bacteria,1NDJZ@1224|Proteobacteria,2UHNJ@28211|Alphaproteobacteria,2K6ZD@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Hpt
SRD3_k127_4488593_3	158500.BV97_01212	4.433e-126	411.0	COG1432@1|root,COG1432@2|Bacteria,1MX5C@1224|Proteobacteria,2TRE6@28211|Alphaproteobacteria,2K1CX@204457|Sphingomonadales	204457|Sphingomonadales	S	OST-HTH/LOTUS domain	-	-	-	-	-	-	-	-	-	-	-	-	NYN,OST-HTH
SRD3_k127_4488593_8	266835.14023820	1.099e-38	148.0	COG0640@1|root,COG0640@2|Bacteria,1N10H@1224|Proteobacteria,2UBRH@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	Transcriptional	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
SRD3_k127_4488593_7	1040982.AXAL01000008_gene4717	2.615e-57	203.0	COG3832@1|root,COG3832@2|Bacteria,1RJJY@1224|Proteobacteria,2U9FZ@28211|Alphaproteobacteria,43MCS@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
SRD3_k127_4488593_2	1122612.AUBA01000005_gene2943	7.833e-141	468.0	28I2U@1|root,2Z86S@2|Bacteria,1P33F@1224|Proteobacteria,2UAF7@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3443)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3443
SRD3_k127_4488593_10	1122612.AUBA01000005_gene2944	1.123e-26	117.0	2E5QB@1|root,330EW@2|Bacteria,1N890@1224|Proteobacteria,2UUCS@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2844)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2844
SRD3_k127_4488593_4	1112214.AHIS01000102_gene1521	7.516e-117	392.0	2AKKZ@1|root,31BDD@2|Bacteria,1NNE3@1224|Proteobacteria,2UMPR@28211|Alphaproteobacteria,2K4ZT@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4488593_5	1112214.AHIS01000102_gene1520	7.164e-116	382.0	COG5330@1|root,COG5330@2|Bacteria,1R3VY@1224|Proteobacteria,2TVFN@28211|Alphaproteobacteria,2K2VA@204457|Sphingomonadales	204457|Sphingomonadales	S	Uncharacterised protein conserved in bacteria (DUF2336)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2336
SRD3_k127_4491045_13	1112212.JH584235_gene1351	9.889e-103	336.0	COG0397@1|root,COG0397@2|Bacteria,1MVK3@1224|Proteobacteria,2TT84@28211|Alphaproteobacteria,2JZUT@204457|Sphingomonadales	204457|Sphingomonadales	S	Uncharacterized ACR, YdiU/UPF0061 family	-	-	-	-	-	-	-	-	-	-	-	-	UPF0061
SRD3_k127_4491045_10	1112212.JH584235_gene1350	1.192e-147	473.0	COG0596@1|root,COG0596@2|Bacteria,1MVVX@1224|Proteobacteria,2TT0S@28211|Alphaproteobacteria,2K14Q@204457|Sphingomonadales	204457|Sphingomonadales	S	Alpha beta hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6
SRD3_k127_4491045_5	1112212.JH584235_gene1349	2.978e-213	665.0	COG2152@1|root,COG2152@2|Bacteria,1Q4YM@1224|Proteobacteria,2UI58@28211|Alphaproteobacteria,2K098@204457|Sphingomonadales	204457|Sphingomonadales	G	beta-1,4-mannooligosaccharide phosphorylase	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_130
SRD3_k127_4491045_28	1219049.SP5_015_00320	4.196e-06	52.0	COG1104@1|root,COG1104@2|Bacteria,1MU1C@1224|Proteobacteria,2TSQE@28211|Alphaproteobacteria,2K05P@204457|Sphingomonadales	204457|Sphingomonadales	E	overlaps another CDS with the same product name	-	-	2.8.1.7	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	-	R07460,R11528,R11529	RC01789,RC02313	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	-	-	-	Aminotran_5
SRD3_k127_4491045_8	1112216.JH594425_gene2211	7.669e-171	543.0	COG0438@1|root,COG0438@2|Bacteria,1MU9C@1224|Proteobacteria,2U43G@28211|Alphaproteobacteria,2K0KR@204457|Sphingomonadales	204457|Sphingomonadales	M	Glycosyl transferase family 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_4,Glycos_transf_1
SRD3_k127_4491045_0	1112212.JH584235_gene1345	2.499e-298	916.0	COG2070@1|root,COG2070@2|Bacteria,1N52W@1224|Proteobacteria,2TV8B@28211|Alphaproteobacteria,2K00A@204457|Sphingomonadales	204457|Sphingomonadales	S	2-nitropropane dioxygenase	-	-	-	-	-	-	-	-	-	-	-	-	NMO
SRD3_k127_4491045_14	392499.Swit_1238	3.613e-98	325.0	COG0518@1|root,COG0518@2|Bacteria,1MUDH@1224|Proteobacteria,2TU60@28211|Alphaproteobacteria,2K3DP@204457|Sphingomonadales	204457|Sphingomonadales	F	glutamine amidotransferase	-	-	6.3.5.2	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	M00050	R01230,R01231,R08244	RC00010,RC00204	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	GATase
SRD3_k127_4491045_7	1379701.JPJC01000242_gene1077	2.293e-171	542.0	COG1052@1|root,COG1052@2|Bacteria,1MU2D@1224|Proteobacteria,2TSM8@28211|Alphaproteobacteria,2K0RX@204457|Sphingomonadales	204457|Sphingomonadales	CH	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family	-	-	1.1.1.26	ko:K00015	ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120	-	R00717,R01388	RC00031,RC00042	ko00000,ko00001,ko01000	-	-	-	2-Hacid_dh,2-Hacid_dh_C
SRD3_k127_4491045_16	1112214.AHIS01000086_gene420	4.328e-78	264.0	COG3807@1|root,COG3807@2|Bacteria,1RHM2@1224|Proteobacteria,2UA1R@28211|Alphaproteobacteria,2K42W@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	SH3_4
SRD3_k127_4491045_18	1112214.AHIS01000086_gene421	7.514e-67	235.0	COG0454@1|root,COG0456@2|Bacteria,1RHB3@1224|Proteobacteria,2U70A@28211|Alphaproteobacteria,2K557@204457|Sphingomonadales	204457|Sphingomonadales	K	Acetyltransferase (GNAT) family	-	-	-	ko:K03829	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_1
SRD3_k127_4491045_4	1112216.JH594425_gene3428	2.02e-217	679.0	COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,2TQQ7@28211|Alphaproteobacteria,2K0FQ@204457|Sphingomonadales	204457|Sphingomonadales	I	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation	-	-	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
SRD3_k127_4491045_17	1112216.JH594425_gene3328	8.576e-71	241.0	COG0824@1|root,COG0824@2|Bacteria,1RHB1@1224|Proteobacteria,2UATC@28211|Alphaproteobacteria,2K4SF@204457|Sphingomonadales	204457|Sphingomonadales	S	thioesterase	-	-	-	ko:K07107	-	-	-	-	ko00000,ko01000	-	-	-	4HBT,Acyl-ACP_TE
SRD3_k127_4491045_25	1449076.JOOE01000001_gene2393	6.55e-26	111.0	2DSF2@1|root,33FWB@2|Bacteria,1NGGP@1224|Proteobacteria,2UMB6@28211|Alphaproteobacteria,2K71I@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4491045_12	1112214.AHIS01000086_gene423	2.808e-113	370.0	COG1989@1|root,COG1989@2|Bacteria,1MUZF@1224|Proteobacteria,2UAW0@28211|Alphaproteobacteria,2K2UB@204457|Sphingomonadales	204457|Sphingomonadales	NOU	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue	gspO	-	3.4.23.43	ko:K02654	-	M00331	-	-	ko00000,ko00002,ko01000,ko01002,ko02035,ko02044	3.A.15.2	-	-	DiS_P_DiS,Peptidase_A24
SRD3_k127_4491045_23	1112212.JH584235_gene811	1.937e-38	149.0	2EN3P@1|root,33FRS@2|Bacteria,1NHN1@1224|Proteobacteria,2UJY6@28211|Alphaproteobacteria,2K6NK@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4491045_3	1112212.JH584235_gene810	2.48e-253	787.0	COG1012@1|root,COG1012@2|Bacteria,1MVGW@1224|Proteobacteria,2TR9T@28211|Alphaproteobacteria,2K0D6@204457|Sphingomonadales	204457|Sphingomonadales	C	Belongs to the aldehyde dehydrogenase family	-	-	1.2.1.68	ko:K00154	-	-	-	-	ko00000,ko01000	-	-	-	Aldedh
SRD3_k127_4491045_26	1123269.NX02_29110	7.636e-18	90.0	298E5@1|root,2ZVJC@2|Bacteria,1PB01@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4491045_15	46429.BV95_00612	4.151e-82	280.0	COG2249@1|root,COG2249@2|Bacteria,1MUHN@1224|Proteobacteria,2U9KV@28211|Alphaproteobacteria,2K5DM@204457|Sphingomonadales	204457|Sphingomonadales	S	Flavodoxin-like fold	-	-	-	-	-	-	-	-	-	-	-	-	Flavodoxin_2
SRD3_k127_4491045_19	1112212.JH584235_gene2530	1.667e-61	228.0	COG0589@1|root,COG0589@2|Bacteria,1QD8E@1224|Proteobacteria,2TRQ7@28211|Alphaproteobacteria,2K4W9@204457|Sphingomonadales	204457|Sphingomonadales	T	Belongs to the universal stress protein A family	-	-	-	-	-	-	-	-	-	-	-	-	Usp
SRD3_k127_4491045_20	1245469.S58_47230	1.197e-55	200.0	COG3128@1|root,COG3128@2|Bacteria,1R838@1224|Proteobacteria,2V6JE@28211|Alphaproteobacteria,3K25K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	No homology to any previously reported sequences	-	-	-	-	-	-	-	-	-	-	-	-	2OG-FeII_Oxy_3
SRD3_k127_4491045_1	1112214.AHIS01000081_gene3538	1.283e-256	806.0	COG3664@1|root,COG3664@2|Bacteria,1MWYX@1224|Proteobacteria,2U4D0@28211|Alphaproteobacteria,2K2IM@204457|Sphingomonadales	204457|Sphingomonadales	G	Glycosyl hydrolases family 39	-	-	3.2.1.37	ko:K01198	ko00520,ko01100,map00520,map01100	-	R01433	RC00467	ko00000,ko00001,ko01000	-	GH43	-	Glyco_hydro_39
SRD3_k127_4491045_9	1449049.JONW01000005_gene1415	4.88e-156	504.0	COG4941@1|root,COG4941@2|Bacteria,1MU3D@1224|Proteobacteria,2TSNH@28211|Alphaproteobacteria,2KFF8@204458|Caulobacterales	204458|Caulobacterales	K	RNA polymerase sigma factor, sigma-70 family	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
SRD3_k127_4491045_24	189753.AXAS01000010_gene7415	9.656e-34	134.0	COG3795@1|root,COG3795@2|Bacteria,1NF05@1224|Proteobacteria,2VESX@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	YCII-related domain	-	-	-	-	-	-	-	-	-	-	-	-	YCII
SRD3_k127_4491045_22	194867.ALBQ01000013_gene874	2.119e-51	184.0	COG3791@1|root,COG3791@2|Bacteria,1RHWZ@1224|Proteobacteria,2UBRG@28211|Alphaproteobacteria,2K5NY@204457|Sphingomonadales	204457|Sphingomonadales	S	Glutathione-dependent formaldehyde-activating enzyme	-	-	-	-	-	-	-	-	-	-	-	-	GFA
SRD3_k127_4491045_2	1112216.JH594425_gene3422	1.139e-253	786.0	COG3508@1|root,COG3508@2|Bacteria,1MV9G@1224|Proteobacteria,2TRFI@28211|Alphaproteobacteria,2K0UM@204457|Sphingomonadales	204457|Sphingomonadales	Q	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate	hmgA	-	1.13.11.5	ko:K00451	ko00350,ko00643,ko01100,ko01120,map00350,map00643,map01100,map01120	M00044	R02519	RC00737	ko00000,ko00001,ko00002,ko01000	-	-	-	HgmA
SRD3_k127_4491045_6	1112212.JH584235_gene806	9.991e-206	644.0	COG3185@1|root,COG3185@2|Bacteria,1MUVZ@1224|Proteobacteria,2TRCC@28211|Alphaproteobacteria,2K0BD@204457|Sphingomonadales	204457|Sphingomonadales	E	4-hydroxyphenylpyruvate dioxygenase	-	-	1.13.11.27	ko:K00457	ko00130,ko00350,ko00360,ko01100,map00130,map00350,map00360,map01100	M00044	R01372,R02521	RC00505,RC00738	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Glyoxalase,Glyoxalase_5
SRD3_k127_4491045_11	685778.AORL01000022_gene1564	2.129e-114	375.0	COG3823@1|root,COG3823@2|Bacteria,1R9YU@1224|Proteobacteria,2U5FS@28211|Alphaproteobacteria,2K3WS@204457|Sphingomonadales	204457|Sphingomonadales	M	Glutamine cyclotransferase	-	-	-	-	-	-	-	-	-	-	-	-	Glu_cyclase_2
SRD3_k127_4491045_21	375286.mma_0896	7.544e-53	189.0	COG1028@1|root,COG1028@2|Bacteria,1MUFX@1224|Proteobacteria,2VMB3@28216|Betaproteobacteria,4779T@75682|Oxalobacteraceae	28216|Betaproteobacteria	IQ	KR domain	-	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
SRD3_k127_451215_18	935557.ATYB01000009_gene694	5.655e-46	169.0	COG5654@1|root,COG5654@2|Bacteria,1RFVI@1224|Proteobacteria,2U859@28211|Alphaproteobacteria,4BEWH@82115|Rhizobiaceae	28211|Alphaproteobacteria	S	RES domain	-	-	-	-	-	-	-	-	-	-	-	-	RES
SRD3_k127_451215_26	935840.JAEQ01000006_gene2476	7.847e-09	58.0	COG5654@1|root,COG5654@2|Bacteria,1RFVI@1224|Proteobacteria,2U859@28211|Alphaproteobacteria,43JNY@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	S	PFAM RES domain	-	-	-	-	-	-	-	-	-	-	-	-	RES
SRD3_k127_451215_20	935840.JAEQ01000006_gene2475	8.357e-42	158.0	29YVS@1|root,30KS7@2|Bacteria,1RF55@1224|Proteobacteria,2VGGT@28211|Alphaproteobacteria,43RPH@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2384)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2384
SRD3_k127_451215_7	745310.G432_21530	7.803e-162	525.0	COG3025@1|root,COG5607@1|root,COG3025@2|Bacteria,COG5607@2|Bacteria,1MY43@1224|Proteobacteria,2TQRV@28211|Alphaproteobacteria,2K14M@204457|Sphingomonadales	204457|Sphingomonadales	S	CYTH	-	-	-	-	-	-	-	-	-	-	-	-	CHAD,CYTH
SRD3_k127_451215_8	1123269.NX02_09125	1.026e-121	406.0	COG0628@1|root,COG0628@2|Bacteria,1MVX7@1224|Proteobacteria,2TVGG@28211|Alphaproteobacteria,2K0BX@204457|Sphingomonadales	204457|Sphingomonadales	S	AI-2E family transporter	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
SRD3_k127_451215_0	1379701.JPJC01000139_gene1306	0.0	1122.0	COG0474@1|root,COG0474@2|Bacteria,1MUU5@1224|Proteobacteria,2TRZD@28211|Alphaproteobacteria,2K18Q@204457|Sphingomonadales	204457|Sphingomonadales	P	Cation transporter/ATPase, N-terminus	-	-	3.6.3.8	ko:K01537	-	-	-	-	ko00000,ko01000	3.A.3.2	-	-	Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase
SRD3_k127_451215_11	1550073.JROH01000013_gene11	3.529e-101	334.0	COG1814@1|root,COG1814@2|Bacteria,1MUZE@1224|Proteobacteria,2TT6M@28211|Alphaproteobacteria,2K1CI@204457|Sphingomonadales	204457|Sphingomonadales	S	membrane	-	-	-	-	-	-	-	-	-	-	-	-	VIT1
SRD3_k127_451215_10	1550073.JROH01000013_gene10	8.048e-102	344.0	COG3658@1|root,COG3658@2|Bacteria,1RIG7@1224|Proteobacteria,2U3PI@28211|Alphaproteobacteria,2K2PI@204457|Sphingomonadales	204457|Sphingomonadales	C	Prokaryotic cytochrome b561	-	-	-	-	-	-	-	-	-	-	-	-	Ni_hydr_CYTB
SRD3_k127_451215_5	1185766.DL1_16725	8.934e-184	588.0	COG0642@1|root,COG2205@2|Bacteria,1N1Z2@1224|Proteobacteria,2TVIP@28211|Alphaproteobacteria	28211|Alphaproteobacteria	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
SRD3_k127_451215_9	1185766.DL1_16730	4.546e-105	345.0	COG0745@1|root,COG0745@2|Bacteria,1MY5Y@1224|Proteobacteria,2VEVS@28211|Alphaproteobacteria,2XPJ3@285107|Thioclava	28211|Alphaproteobacteria	K	Transcriptional regulatory protein, C terminal	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
SRD3_k127_451215_13	5147.XP_003342592.1	8.673e-70	251.0	2F1HF@1|root,2T2HS@2759|Eukaryota,3ATQT@33154|Opisthokonta	33154|Opisthokonta	S	Prokaryotic cytochrome b561	-	-	-	-	-	-	-	-	-	-	-	-	Ni_hydr_CYTB
SRD3_k127_451215_23	1185766.DL1_16740	2.96e-35	137.0	COG5591@1|root,COG5591@2|Bacteria,1N7YT@1224|Proteobacteria,2UFVZ@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Peptidase propeptide and YPEB domain	-	-	-	-	-	-	-	-	-	-	-	-	PepSY_2
SRD3_k127_451215_17	1090320.KB900606_gene75	4.542e-62	220.0	COG1592@1|root,COG1592@2|Bacteria,1RC1F@1224|Proteobacteria,2V6XV@28211|Alphaproteobacteria,2K85S@204457|Sphingomonadales	204457|Sphingomonadales	C	Rubrerythrin	-	-	-	-	-	-	-	-	-	-	-	-	Rubrerythrin
SRD3_k127_451215_6	1123269.NX02_09110	4.723e-176	563.0	COG3174@1|root,COG3174@2|Bacteria,1NDBI@1224|Proteobacteria,2U0C9@28211|Alphaproteobacteria,2K374@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF4010)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4010,MgtC
SRD3_k127_451215_24	1123269.NX02_09130	6.879e-32	129.0	COG1734@1|root,COG1734@2|Bacteria,1N8K6@1224|Proteobacteria,2UCF1@28211|Alphaproteobacteria,2K7EE@204457|Sphingomonadales	204457|Sphingomonadales	T	Prokaryotic dksA/traR C4-type zinc finger	-	-	-	-	-	-	-	-	-	-	-	-	zf-dskA_traR
SRD3_k127_451215_4	13689.BV96_00060	1.06e-189	602.0	COG0038@1|root,COG0038@2|Bacteria,1MV4K@1224|Proteobacteria,2TT6V@28211|Alphaproteobacteria,2K0WI@204457|Sphingomonadales	204457|Sphingomonadales	P	Chloride channel	-	-	-	-	-	-	-	-	-	-	-	-	Voltage_CLC
SRD3_k127_451215_21	1235457.C404_04155	8.417e-41	154.0	COG0640@1|root,COG0640@2|Bacteria,1N10H@1224|Proteobacteria,2VUMP@28216|Betaproteobacteria,1K8ZS@119060|Burkholderiaceae	28216|Betaproteobacteria	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20
SRD3_k127_451215_15	1235457.C404_04160	2.709e-67	234.0	COG3832@1|root,COG3832@2|Bacteria,1REFR@1224|Proteobacteria	1224|Proteobacteria	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
SRD3_k127_451215_16	279238.Saro_3456	1.479e-63	218.0	COG3791@1|root,COG3791@2|Bacteria,1N7AZ@1224|Proteobacteria,2UFKY@28211|Alphaproteobacteria,2K6EG@204457|Sphingomonadales	204457|Sphingomonadales	S	Glutathione-dependent formaldehyde-activating	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_451215_12	666685.R2APBS1_2528	6.05e-82	281.0	2A1SN@1|root,30Q1C@2|Bacteria,1NXN6@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_451215_22	485913.Krac_3360	7.831e-36	143.0	COG1413@1|root,COG1413@2|Bacteria	2|Bacteria	C	deoxyhypusine monooxygenase activity	cpeY	-	-	ko:K05385	ko00196,ko01100,map00196,map01100	-	-	-	ko00000,ko00001,ko00194	-	-	-	CHAT,DUF1822,HEAT_2,Lipase_GDSL_2,Vitellogenin_N
SRD3_k127_451215_25	1549858.MC45_18090	1.945e-26	109.0	COG3585@1|root,COG3585@2|Bacteria,1N7IB@1224|Proteobacteria,2UFW3@28211|Alphaproteobacteria,2K7BW@204457|Sphingomonadales	204457|Sphingomonadales	H	TOBE domain	-	-	-	-	-	-	-	-	-	-	-	-	TOBE
SRD3_k127_451215_19	629773.AORY01000015_gene1329	2.609e-43	161.0	COG2005@1|root,COG2005@2|Bacteria,1P9SX@1224|Proteobacteria,2UC9Q@28211|Alphaproteobacteria,2K60A@204457|Sphingomonadales	204457|Sphingomonadales	S	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	ko:K02019	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1
SRD3_k127_451215_1	1112214.AHIS01000081_gene3504	3.341e-320	998.0	COG1629@1|root,COG1629@2|Bacteria,1QTVF@1224|Proteobacteria,2TYY4@28211|Alphaproteobacteria,2K2GI@204457|Sphingomonadales	204457|Sphingomonadales	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SRD3_k127_451215_2	1346791.M529_20160	1.305e-259	833.0	COG2203@1|root,COG4191@1|root,COG2203@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TQQ9@28211|Alphaproteobacteria,2K01C@204457|Sphingomonadales	204457|Sphingomonadales	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HATPase_c,HisKA,PAS_3,PAS_4,PAS_9,ParD_antitoxin,Response_reg
SRD3_k127_451215_3	648757.Rvan_1512	1.623e-202	651.0	COG0784@1|root,COG2202@1|root,COG4191@1|root,COG0784@2|Bacteria,COG2202@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TQQ9@28211|Alphaproteobacteria,3N7PZ@45401|Hyphomicrobiaceae	28211|Alphaproteobacteria	T	PFAM ATP-binding region ATPase domain protein	-	-	-	-	-	-	-	-	-	-	-	-	GAF,GAF_2,HATPase_c,HisKA,MHYT,PAS,PAS_3,PAS_4,PAS_8,PAS_9,Response_reg
SRD3_k127_451215_14	1112214.AHIS01000056_gene2961	4.511e-69	235.0	COG0467@1|root,COG0467@2|Bacteria,1NEWW@1224|Proteobacteria,2TRTV@28211|Alphaproteobacteria,2K1EN@204457|Sphingomonadales	204457|Sphingomonadales	T	Circadian clock protein KaiC	-	-	-	ko:K08482	-	-	-	-	ko00000	-	-	-	ATPase
SRD3_k127_4530100_18	1545915.JROG01000010_gene2975	5.783e-96	317.0	COG0582@1|root,COG0582@2|Bacteria,1R4UZ@1224|Proteobacteria,2U0XX@28211|Alphaproteobacteria,2K3QA@204457|Sphingomonadales	204457|Sphingomonadales	L	Phage integrase family	-	-	-	-	-	-	-	-	-	-	-	-	Phage_integrase
SRD3_k127_4530100_24	1144343.PMI41_00414	6.991e-70	242.0	COG0350@1|root,COG0350@2|Bacteria,1MVF7@1224|Proteobacteria,2TV5U@28211|Alphaproteobacteria,43K7V@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	L	Methyltransferase	ogt	-	2.1.1.63	ko:K00567	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DNA_binding_1
SRD3_k127_4530100_15	685778.AORL01000006_gene3433	4.89e-124	414.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,2TQR7@28211|Alphaproteobacteria,2K1AE@204457|Sphingomonadales	204457|Sphingomonadales	NT	chemotaxis	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	MCPsignal
SRD3_k127_4530100_23	1449076.JOOE01000001_gene3020	6.367e-74	253.0	COG1595@1|root,COG1595@2|Bacteria,1MVPD@1224|Proteobacteria,2TVKC@28211|Alphaproteobacteria,2K4M1@204457|Sphingomonadales	204457|Sphingomonadales	K	Sigma-70, region 4	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r2,Sigma70_r4_2
SRD3_k127_4530100_26	1449076.JOOE01000001_gene3021	1.926e-61	218.0	2ES5B@1|root,33JQ4@2|Bacteria,1NHPR@1224|Proteobacteria,2UN83@28211|Alphaproteobacteria,2K67H@204457|Sphingomonadales	204457|Sphingomonadales	S	Putative zinc-finger	-	-	-	-	-	-	-	-	-	-	-	-	zf-HC2
SRD3_k127_4530100_31	1081640.AGFU01000023_gene2253	2.857e-28	126.0	COG1404@1|root,COG1404@2|Bacteria,1MU3S@1224|Proteobacteria,2TT0E@28211|Alphaproteobacteria	28211|Alphaproteobacteria	O	Peptidase S8 and S53 subtilisin kexin sedolisin	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
SRD3_k127_4530100_28	450851.PHZ_c1636	1.015e-40	156.0	COG1765@1|root,COG1765@2|Bacteria,1N2BT@1224|Proteobacteria,2TQN7@28211|Alphaproteobacteria,2KH9F@204458|Caulobacterales	204458|Caulobacterales	O	PFAM OsmC family protein	-	-	-	ko:K06889,ko:K07397	-	-	-	-	ko00000	-	-	-	Hydrolase_4,OsmC
SRD3_k127_4530100_21	1449076.JOOE01000002_gene1178	6.513e-85	285.0	COG0229@1|root,COG0229@2|Bacteria,1RGWC@1224|Proteobacteria,2U5Q0@28211|Alphaproteobacteria,2K40G@204457|Sphingomonadales	204457|Sphingomonadales	O	COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase	msrB	-	1.8.4.12	ko:K07305	-	-	-	-	ko00000,ko01000	-	-	-	SelR
SRD3_k127_4530100_17	420324.KI912036_gene2585	2.109e-97	320.0	COG0225@1|root,COG0225@2|Bacteria,1MVUS@1224|Proteobacteria,2TSAM@28211|Alphaproteobacteria,1JS16@119045|Methylobacteriaceae	28211|Alphaproteobacteria	O	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine	msrA	-	1.8.4.11	ko:K07304	-	-	-	-	ko00000,ko01000	-	-	-	PMSR
SRD3_k127_4530100_20	685778.AORL01000010_gene3076	1.281e-85	288.0	COG1573@1|root,COG1573@2|Bacteria,1R9XV@1224|Proteobacteria,2TSWU@28211|Alphaproteobacteria,2K50T@204457|Sphingomonadales	204457|Sphingomonadales	L	UreE urease accessory protein, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	UDG
SRD3_k127_4530100_33	1219045.BV98_000270	3.349e-22	96.0	COG1190@1|root,COG1190@2|Bacteria,1QURK@1224|Proteobacteria,2TW4T@28211|Alphaproteobacteria,2K847@204457|Sphingomonadales	204457|Sphingomonadales	J	KTSC domain	-	-	-	-	-	-	-	-	-	-	-	-	KTSC
SRD3_k127_4530100_5	365046.Rta_13470	6.213e-236	741.0	COG0492@1|root,COG0664@1|root,COG0492@2|Bacteria,COG0664@2|Bacteria,1MVX2@1224|Proteobacteria,2VM3V@28216|Betaproteobacteria,4AHC9@80864|Comamonadaceae	28216|Betaproteobacteria	C	L-lysine 6-monooxygenase (NADPH-requiring)	-	-	1.8.1.9	ko:K00384	ko00450,map00450	-	R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2,Pyr_redox_3,cNMP_binding
SRD3_k127_4530100_13	1112216.JH594425_gene1067	2.902e-136	437.0	COG1801@1|root,COG1801@2|Bacteria,1MU7F@1224|Proteobacteria,2TT1D@28211|Alphaproteobacteria,2K0SX@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function DUF72	-	-	-	-	-	-	-	-	-	-	-	-	DUF72
SRD3_k127_4530100_22	1112216.JH594425_gene1068	3.766e-84	290.0	291EX@1|root,2ZP1S@2|Bacteria,1RF3T@1224|Proteobacteria,2U83Z@28211|Alphaproteobacteria,2K4S8@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Mitofilin
SRD3_k127_4530100_27	1112212.JH584235_gene2476	1.016e-56	207.0	COG1587@1|root,COG1587@2|Bacteria,1NMTP@1224|Proteobacteria,2UMED@28211|Alphaproteobacteria,2K52Q@204457|Sphingomonadales	204457|Sphingomonadales	H	Uroporphyrinogen-III synthase	hemD	-	4.2.1.75	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R03165	RC01861	ko00000,ko00001,ko00002,ko01000	-	-	-	HEM4
SRD3_k127_4530100_14	1112212.JH584235_gene2475	1.512e-131	428.0	COG0181@1|root,COG0181@2|Bacteria,1MU56@1224|Proteobacteria,2TS3D@28211|Alphaproteobacteria,2K19Y@204457|Sphingomonadales	204457|Sphingomonadales	H	Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps	hemC	-	2.5.1.61	ko:K01749	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R00084	RC02317	ko00000,ko00001,ko00002,ko01000	-	-	-	Porphobil_deam,Porphobil_deamC
SRD3_k127_4530100_8	1112212.JH584235_gene2474	1.931e-189	595.0	COG0533@1|root,COG0533@2|Bacteria,1MU6S@1224|Proteobacteria,2TSF7@28211|Alphaproteobacteria,2K0S9@204457|Sphingomonadales	204457|Sphingomonadales	O	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction	tsaD	-	2.3.1.234	ko:K01409	-	-	R10648	RC00070,RC00416	ko00000,ko01000,ko03016	-	-	-	Peptidase_M22
SRD3_k127_4530100_10	1112212.JH584235_gene2473	3.126e-160	509.0	COG0240@1|root,COG0240@2|Bacteria,1MUU3@1224|Proteobacteria,2TT75@28211|Alphaproteobacteria,2K0GB@204457|Sphingomonadales	204457|Sphingomonadales	I	Glycerol-3-phosphate dehydrogenase	gpsA	-	1.1.1.94	ko:K00057	ko00564,ko01110,map00564,map01110	-	R00842,R00844	RC00029	ko00000,ko00001,ko01000	-	-	-	NAD_Gly3P_dh_C,NAD_Gly3P_dh_N
SRD3_k127_4530100_25	1112214.AHIS01000047_gene2106	9.532e-64	224.0	COG3797@1|root,COG3797@2|Bacteria,1NBM5@1224|Proteobacteria,2UGTJ@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1697)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1697
SRD3_k127_4530100_34	1090320.KB900605_gene1257	1.632e-17	83.0	COG5508@1|root,COG5508@2|Bacteria,1NI4B@1224|Proteobacteria,2UMEQ@28211|Alphaproteobacteria,2K7K5@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF1674)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1674
SRD3_k127_4530100_7	1112212.JH584235_gene2471	2.074e-204	647.0	COG0144@1|root,COG0144@2|Bacteria,1MWPE@1224|Proteobacteria,2TSIA@28211|Alphaproteobacteria,2K0U7@204457|Sphingomonadales	204457|Sphingomonadales	J	Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family	-	-	2.1.1.176	ko:K03500	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltr_RsmB-F,NusB
SRD3_k127_4530100_16	1112214.AHIS01000047_gene2103	1.25e-117	380.0	COG0036@1|root,COG0036@2|Bacteria,1MUZM@1224|Proteobacteria,2TQKR@28211|Alphaproteobacteria,2K1ZB@204457|Sphingomonadales	204457|Sphingomonadales	G	Belongs to the ribulose-phosphate 3-epimerase family	rpe	-	5.1.3.1	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007	R01529	RC00540	ko00000,ko00001,ko00002,ko01000	-	-	-	Ribul_P_3_epim
SRD3_k127_4530100_2	1112212.JH584235_gene2469	3.863e-299	926.0	COG5360@1|root,COG5360@2|Bacteria,1MUJ4@1224|Proteobacteria,2TR5G@28211|Alphaproteobacteria,2K1RQ@204457|Sphingomonadales	204457|Sphingomonadales	S	Heparinase	-	-	-	-	-	-	-	-	-	-	-	-	Hepar_II_III
SRD3_k127_4530100_4	1112212.JH584235_gene2468	3.895e-281	871.0	COG0138@1|root,COG0138@2|Bacteria,1MUDQ@1224|Proteobacteria,2TRMY@28211|Alphaproteobacteria,2K0R5@204457|Sphingomonadales	204457|Sphingomonadales	F	Bifunctional purine biosynthesis protein PurH	purH	-	2.1.2.3,3.5.4.10	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	M00048	R01127,R04560	RC00026,RC00263,RC00456	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	AICARFT_IMPCHas,MGS
SRD3_k127_4530100_6	1219049.SP5_040_00430	6.575e-227	714.0	COG2244@1|root,COG2244@2|Bacteria,1PDRG@1224|Proteobacteria,2TVKM@28211|Alphaproteobacteria,2K0P5@204457|Sphingomonadales	204457|Sphingomonadales	S	Polysaccharide biosynthesis protein	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_synt,Polysacc_synt_3
SRD3_k127_4530100_0	1112212.JH584235_gene2466	0.0	1635.0	COG0258@1|root,COG0749@1|root,COG0258@2|Bacteria,COG0749@2|Bacteria,1MU31@1224|Proteobacteria,2TRJF@28211|Alphaproteobacteria,2K1KW@204457|Sphingomonadales	204457|Sphingomonadales	L	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	polA	-	2.7.7.7	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	-	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	5_3_exonuc,5_3_exonuc_N,DNA_pol_A,DNA_pol_A_exo1
SRD3_k127_4530100_11	1112212.JH584235_gene2465	1.906e-159	511.0	COG2367@1|root,COG2367@2|Bacteria,1PNSR@1224|Proteobacteria,2U483@28211|Alphaproteobacteria,2K1SY@204457|Sphingomonadales	204457|Sphingomonadales	V	beta-lactamase	-	-	3.5.2.6	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	M00627,M00628	R06363	RC01499	ko00000,ko00001,ko00002,ko01000,ko01504	-	-	-	Beta-lactamase2,Peptidase_S13
SRD3_k127_4530100_1	1112214.AHIS01000047_gene2097	1.469e-319	985.0	COG0029@1|root,COG0029@2|Bacteria,1RBQW@1224|Proteobacteria,2TS0E@28211|Alphaproteobacteria,2JZXW@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the oxidation of L-aspartate to iminoaspartate	nadB	-	1.4.3.16	ko:K00278	ko00250,ko00760,ko01100,map00250,map00760,map01100	M00115	R00357,R00481	RC00006,RC02566	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_2,Succ_DH_flav_C
SRD3_k127_4530100_9	1112214.AHIS01000047_gene2096	1.095e-179	567.0	COG1131@1|root,COG1131@2|Bacteria,1MUW7@1224|Proteobacteria,2TR2Q@28211|Alphaproteobacteria,2K06G@204457|Sphingomonadales	204457|Sphingomonadales	V	ABC-type multidrug transport system, ATPase component	-	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
SRD3_k127_4530100_29	1470591.BW41_02992	2.972e-39	149.0	COG4391@1|root,COG4391@2|Bacteria,1N7F4@1224|Proteobacteria,2UHY4@28211|Alphaproteobacteria,2K6U4@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	zf-CHCC
SRD3_k127_4530100_3	1112212.JH584235_gene2460	5.667e-284	876.0	COG0312@1|root,COG0312@2|Bacteria,1MUSK@1224|Proteobacteria,2TRSR@28211|Alphaproteobacteria,2JZY8@204457|Sphingomonadales	204457|Sphingomonadales	S	peptidase U62, modulator of DNA gyrase	tldD	-	-	ko:K03568	-	-	-	-	ko00000,ko01002	-	-	-	PmbA_TldD
SRD3_k127_4530100_12	1112214.AHIS01000047_gene2091	3.547e-154	491.0	28HGI@1|root,2Z7SC@2|Bacteria,1MWKC@1224|Proteobacteria,2TUQY@28211|Alphaproteobacteria,2K00Y@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4530100_19	1090318.ATTI01000001_gene3400	1.045e-87	302.0	COG3576@1|root,COG3576@2|Bacteria,1R8RC@1224|Proteobacteria,2TUXH@28211|Alphaproteobacteria,2K323@204457|Sphingomonadales	204457|Sphingomonadales	S	Pfam:Pyridox_oxidase	-	-	-	-	-	-	-	-	-	-	-	-	Putative_PNPOx
SRD3_k127_4530100_32	1112212.JH584235_gene2458	4.252e-26	111.0	2AG1F@1|root,3165I@2|Bacteria,1NGEF@1224|Proteobacteria,2UMPX@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Putative prokaryotic signal transducing protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF2007
SRD3_k127_4530100_30	1112214.AHIS01000047_gene2088	6.019e-38	144.0	COG0347@1|root,COG0347@2|Bacteria,1RGWK@1224|Proteobacteria,2U952@28211|Alphaproteobacteria,2K4EF@204457|Sphingomonadales	204457|Sphingomonadales	K	Belongs to the P(II) protein family	-	-	-	ko:K04752	-	-	-	-	ko00000	-	-	-	P-II
SRD3_k127_4563757_3	1112212.JH584235_gene1795	2.731e-34	132.0	COG3762@1|root,COG3762@2|Bacteria,1R61N@1224|Proteobacteria,2U5XG@28211|Alphaproteobacteria,2K470@204457|Sphingomonadales	204457|Sphingomonadales	S	membrane	-	-	-	ko:K08988	-	-	-	-	ko00000	-	-	-	TPM_phosphatase
SRD3_k127_4563757_1	1112212.JH584235_gene1794	1.451e-70	246.0	COG0494@1|root,COG0494@2|Bacteria,1RE72@1224|Proteobacteria,2U805@28211|Alphaproteobacteria,2K4H0@204457|Sphingomonadales	204457|Sphingomonadales	L	Nudix hydrolase	-	-	3.6.1.13	ko:K01515	ko00230,map00230	-	R01054	RC00002	ko00000,ko00001,ko01000	-	-	-	NUDIX
SRD3_k127_4563757_2	1090319.KE386571_gene1983	1.083e-43	167.0	2C7TH@1|root,32RJS@2|Bacteria,1MZK8@1224|Proteobacteria,2UC2R@28211|Alphaproteobacteria,2K5XZ@204457|Sphingomonadales	204457|Sphingomonadales	S	ETC complex I subunit	-	-	-	-	-	-	-	-	-	-	-	-	ETC_C1_NDUFA4
SRD3_k127_4563757_0	1112216.JH594425_gene1588	7.09e-161	512.0	COG1643@1|root,COG1643@2|Bacteria,1MUEQ@1224|Proteobacteria,2TRMJ@28211|Alphaproteobacteria,2K0GM@204457|Sphingomonadales	204457|Sphingomonadales	L	ATP-dependent helicase	hrpB	-	3.6.4.13	ko:K03579	-	-	-	-	ko00000,ko01000	-	-	-	DEAD,HA2,Helicase_C,HrpB_C
SRD3_k127_4582990_9	1449076.JOOE01000004_gene309	1.882e-20	92.0	COG1529@1|root,COG1529@2|Bacteria,1QTTJ@1224|Proteobacteria,2TQVK@28211|Alphaproteobacteria,2K25R@204457|Sphingomonadales	204457|Sphingomonadales	C	aerobic-type carbon monoxide dehydrogenase, large subunit CoxL	-	-	1.3.99.16	ko:K07303	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C2
SRD3_k127_4582990_3	1449076.JOOE01000004_gene309	8.539e-162	515.0	COG1529@1|root,COG1529@2|Bacteria,1QTTJ@1224|Proteobacteria,2TQVK@28211|Alphaproteobacteria,2K25R@204457|Sphingomonadales	204457|Sphingomonadales	C	aerobic-type carbon monoxide dehydrogenase, large subunit CoxL	-	-	1.3.99.16	ko:K07303	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C2
SRD3_k127_4582990_8	1449076.JOOE01000004_gene310	7.985e-76	266.0	29NNR@1|root,309KP@2|Bacteria,1R91H@1224|Proteobacteria,2TUSZ@28211|Alphaproteobacteria,2K41V@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4582990_5	745310.G432_03725	1.187e-123	405.0	COG1024@1|root,COG1024@2|Bacteria,1MVPQ@1224|Proteobacteria,2TTJ4@28211|Alphaproteobacteria,2K20K@204457|Sphingomonadales	204457|Sphingomonadales	I	enoyl-CoA hydratase	-	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SRD3_k127_4582990_2	1090320.KB900605_gene3354	1.917e-183	581.0	COG3970@1|root,COG3970@2|Bacteria,1MVA2@1224|Proteobacteria,2TT82@28211|Alphaproteobacteria,2K05H@204457|Sphingomonadales	204457|Sphingomonadales	S	Fumarylacetoacetate (FAA) hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	FAA_hydrolase
SRD3_k127_4582990_4	1379701.JPJC01000229_gene2382	5.369e-133	428.0	COG1028@1|root,COG1028@2|Bacteria,1MXTP@1224|Proteobacteria,2TQST@28211|Alphaproteobacteria,2K1SJ@204457|Sphingomonadales	204457|Sphingomonadales	IQ	reductase	-	-	1.1.1.175	ko:K22185	ko00040,map00040	-	R01429	RC00066	ko00000,ko00001,ko01000	-	-	-	adh_short_C2
SRD3_k127_4582990_6	1549858.MC45_10355	9.632e-123	400.0	COG3386@1|root,COG3386@2|Bacteria,1MWTR@1224|Proteobacteria,2TV5X@28211|Alphaproteobacteria,2K16R@204457|Sphingomonadales	204457|Sphingomonadales	G	Gluconolactonase	-	-	-	ko:K14274	ko00040,map00040	-	R02427	RC00713	ko00000,ko00001,ko01000	-	-	-	SGL
SRD3_k127_4582990_1	745310.G432_12870	2.036e-215	677.0	COG0477@1|root,COG0477@2|Bacteria,1NS3F@1224|Proteobacteria,2TW3F@28211|Alphaproteobacteria,2K03Z@204457|Sphingomonadales	204457|Sphingomonadales	EGP	Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family	-	-	-	ko:K08139,ko:K13854	ko04113,map04113	-	-	-	ko00000,ko00001,ko02000	2.A.1.1,2.A.1.1.4	-	-	Sugar_tr
SRD3_k127_4582990_7	452662.SJA_C1-12840	2.239e-77	275.0	COG2017@1|root,COG2017@2|Bacteria,1RGXX@1224|Proteobacteria,2U93Z@28211|Alphaproteobacteria,2K56V@204457|Sphingomonadales	204457|Sphingomonadales	G	Aldose 1-epimerase	-	-	5.1.3.3	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	M00632	R01602,R10619	RC00563	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldose_epim
SRD3_k127_4582990_0	1282362.AEAC466_20150	3.901e-315	982.0	COG3507@1|root,COG3507@2|Bacteria,1QS8P@1224|Proteobacteria,2U2I7@28211|Alphaproteobacteria,2KHQK@204458|Caulobacterales	204458|Caulobacterales	G	Glycosyl hydrolases family 43	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_43
SRD3_k127_4582990_10	1335760.ASTG01000016_gene198	1.772e-12	68.0	COG0004@1|root,COG0004@2|Bacteria,1NR9F@1224|Proteobacteria,2TT2J@28211|Alphaproteobacteria,2K3DE@204457|Sphingomonadales	204457|Sphingomonadales	P	Ammonium Transporter	-	-	-	ko:K03320	-	-	-	-	ko00000,ko02000	1.A.11	-	-	Ammonium_transp
SRD3_k127_4629276_0	1123269.NX02_22345	1.35e-282	884.0	COG2303@1|root,COG2303@2|Bacteria,1P9UF@1224|Proteobacteria,2U3F9@28211|Alphaproteobacteria,2K2U7@204457|Sphingomonadales	204457|Sphingomonadales	E	GMC oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	GMC_oxred_C,GMC_oxred_N
SRD3_k127_4629276_1	1112212.JH584235_gene2916	1.908e-146	471.0	COG0433@1|root,COG0433@2|Bacteria,1MVA9@1224|Proteobacteria,2TTKA@28211|Alphaproteobacteria,2K0TP@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function DUF87	-	-	-	ko:K06915	-	-	-	-	ko00000	-	-	-	DUF87
SRD3_k127_4648075_4	1090318.ATTI01000001_gene2736	5.981e-140	446.0	COG1028@1|root,COG1028@2|Bacteria,1MUEV@1224|Proteobacteria,2TRCF@28211|Alphaproteobacteria,2K0A2@204457|Sphingomonadales	204457|Sphingomonadales	IQ	Acetoacetyl-CoA reductase	phbB	-	1.1.1.36	ko:K00023	ko00630,ko00650,ko01120,ko01200,map00630,map00650,map01120,map01200	M00373	R01779,R01977	RC00103,RC00117	ko00000,ko00001,ko00002,ko01000	-	-	-	adh_short_C2
SRD3_k127_4648075_2	1090320.KB900605_gene1245	1.659e-170	555.0	COG0276@1|root,COG0276@2|Bacteria,1MVR1@1224|Proteobacteria,2TSMS@28211|Alphaproteobacteria,2K0NQ@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the ferrous insertion into protoporphyrin IX	hemH	-	4.99.1.1,4.99.1.9	ko:K01772	ko00860,ko01100,ko01110,map00860,map01100,map01110	M00121	R00310,R11329	RC01012	ko00000,ko00001,ko00002,ko01000	-	-	-	Ferrochelatase
SRD3_k127_4648075_0	1112212.JH584235_gene2936	0.0	1112.0	COG1529@1|root,COG1529@2|Bacteria,1QTTJ@1224|Proteobacteria,2TQVK@28211|Alphaproteobacteria,2K25R@204457|Sphingomonadales	204457|Sphingomonadales	C	aerobic-type carbon monoxide dehydrogenase, large subunit CoxL	-	-	1.3.99.16	ko:K07303	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2
SRD3_k127_4648075_1	1112214.AHIS01000056_gene3009	1.085e-276	860.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,2JZZB@204457|Sphingomonadales	204457|Sphingomonadales	IQ	COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II	-	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C
SRD3_k127_4648075_3	1112216.JH594425_gene1121	9.028e-154	492.0	COG0682@1|root,COG0682@2|Bacteria,1MVE3@1224|Proteobacteria,2TTNS@28211|Alphaproteobacteria,2K1JZ@204457|Sphingomonadales	204457|Sphingomonadales	M	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins	lgt	-	-	ko:K13292	-	-	-	-	ko00000,ko01000	-	-	-	LGT
SRD3_k127_4648075_5	1470591.BW41_03444	1.41e-103	338.0	COG1565@1|root,COG1565@2|Bacteria,1N3CJ@1224|Proteobacteria,2TRHW@28211|Alphaproteobacteria,2K21E@204457|Sphingomonadales	204457|Sphingomonadales	M	Putative S-adenosyl-L-methionine-dependent methyltransferase	-	-	-	ko:K18164	ko04714,map04714	-	-	-	ko00000,ko00001,ko03029	-	-	-	Methyltransf_28
SRD3_k127_4649233_11	1112216.JH594425_gene1265	1.229e-79	267.0	COG2197@1|root,COG2197@2|Bacteria,1QWB3@1224|Proteobacteria,2TWYK@28211|Alphaproteobacteria,2K428@204457|Sphingomonadales	204457|Sphingomonadales	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
SRD3_k127_4649233_3	1112212.JH584235_gene2621	2.093e-157	503.0	COG0745@1|root,COG3920@1|root,COG0745@2|Bacteria,COG3920@2|Bacteria,1MVPJ@1224|Proteobacteria,2TSSQ@28211|Alphaproteobacteria,2K1WB@204457|Sphingomonadales	204457|Sphingomonadales	T	Histidine kinase-like ATPase domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HATPase_c_2,HisKA_2,Response_reg
SRD3_k127_4649233_9	1234364.AMSF01000048_gene2035	5.998e-84	289.0	COG4798@1|root,COG4798@2|Bacteria,1RHGZ@1224|Proteobacteria,1S2WK@1236|Gammaproteobacteria,1X5N0@135614|Xanthomonadales	135614|Xanthomonadales	M	Methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	PCMT
SRD3_k127_4649233_10	1219049.SP5_033_00090	7.958e-81	273.0	COG4798@1|root,COG4798@2|Bacteria,1RHGZ@1224|Proteobacteria,2U7R8@28211|Alphaproteobacteria,2KDKG@204457|Sphingomonadales	204457|Sphingomonadales	S	Methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4649233_14	1007104.SUS17_4006	4.567e-05	47.0	COG4798@1|root,COG4798@2|Bacteria,1RHGZ@1224|Proteobacteria,2U7R8@28211|Alphaproteobacteria,2KDKG@204457|Sphingomonadales	204457|Sphingomonadales	S	Methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4649233_0	1112212.JH584235_gene2616	0.0	1450.0	COG0187@1|root,COG0187@2|Bacteria,1MVKT@1224|Proteobacteria,2TRBK@28211|Alphaproteobacteria,2K0E4@204457|Sphingomonadales	204457|Sphingomonadales	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	gyrB	-	5.99.1.3	ko:K02470	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim
SRD3_k127_4649233_2	1112214.AHIS01000047_gene2135	3.802e-169	539.0	COG1195@1|root,COG1195@2|Bacteria,1MX8N@1224|Proteobacteria,2TQRD@28211|Alphaproteobacteria,2K0WV@204457|Sphingomonadales	204457|Sphingomonadales	L	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP	recF	-	-	ko:K03629	ko03440,map03440	-	-	-	ko00000,ko00001,ko03400	-	-	-	SMC_N
SRD3_k127_4649233_4	1112212.JH584235_gene2609	1.417e-136	438.0	COG5031@1|root,COG5031@2|Bacteria,1RGXT@1224|Proteobacteria,2U8F1@28211|Alphaproteobacteria,2K2NK@204457|Sphingomonadales	204457|Sphingomonadales	H	Coenzyme Q (ubiquinone) biosynthesis protein Coq4	-	-	-	ko:K18586	-	-	-	-	ko00000	-	-	-	Coq4
SRD3_k127_4649233_13	1088721.NSU_4855	2.183e-70	248.0	COG1073@1|root,COG1073@2|Bacteria,1MY4C@1224|Proteobacteria,2U8KN@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_4
SRD3_k127_4649233_1	1112216.JH594425_gene1221	3.072e-226	704.0	COG0592@1|root,COG0592@2|Bacteria,1MVD9@1224|Proteobacteria,2TSRZ@28211|Alphaproteobacteria,2K052@204457|Sphingomonadales	204457|Sphingomonadales	L	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria	dnaN	-	2.7.7.7	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_beta,DNA_pol3_beta_2,DNA_pol3_beta_3
SRD3_k127_4649233_8	1112212.JH584235_gene2607	1.031e-99	330.0	COG3637@1|root,COG3637@2|Bacteria,1NJWW@1224|Proteobacteria,2UD8G@28211|Alphaproteobacteria,2K4HB@204457|Sphingomonadales	204457|Sphingomonadales	M	Outer membrane protein beta-barrel domain	-	-	-	ko:K16079	-	-	-	-	ko00000,ko02000	1.B.4.2.1	-	-	OMP_b-brl
SRD3_k127_4649233_7	1112212.JH584235_gene2606	2.128e-100	331.0	COG0406@1|root,COG0406@2|Bacteria,1RG9K@1224|Proteobacteria,2U8NV@28211|Alphaproteobacteria,2K1EM@204457|Sphingomonadales	204457|Sphingomonadales	G	Histidine phosphatase superfamily (branch 1)	-	-	-	-	-	-	-	-	-	-	-	-	His_Phos_1
SRD3_k127_4649233_12	1112212.JH584235_gene2605	2.122e-74	256.0	COG5342@1|root,COG5342@2|Bacteria,1NVB8@1224|Proteobacteria,2UAQU@28211|Alphaproteobacteria,2K5Q9@204457|Sphingomonadales	204457|Sphingomonadales	S	invasion associated locus B	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4649233_6	1112212.JH584235_gene2604	4.193e-109	362.0	COG0583@1|root,COG0583@2|Bacteria,1MWVB@1224|Proteobacteria,2TTFG@28211|Alphaproteobacteria,2KCRN@204457|Sphingomonadales	204457|Sphingomonadales	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SRD3_k127_4649233_5	1112212.JH584235_gene2603	1.235e-135	437.0	COG0451@1|root,COG0451@2|Bacteria,1MXYR@1224|Proteobacteria,2TT4T@28211|Alphaproteobacteria,2K0NB@204457|Sphingomonadales	204457|Sphingomonadales	GM	COG0451 Nucleoside-diphosphate-sugar epimerases	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase,NAD_binding_10
SRD3_k127_4681985_4	1112216.JH594425_gene1427	3.69e-67	229.0	COG0824@1|root,COG0824@2|Bacteria,1N06V@1224|Proteobacteria,2UCAQ@28211|Alphaproteobacteria,2K5A4@204457|Sphingomonadales	204457|Sphingomonadales	S	thioesterase	-	-	-	ko:K07107	-	-	-	-	ko00000,ko01000	-	-	-	Acyl-ACP_TE
SRD3_k127_4681985_0	1112214.AHIS01000051_gene2439	0.0	1306.0	COG1770@1|root,COG1770@2|Bacteria,1MUED@1224|Proteobacteria,2TTR0@28211|Alphaproteobacteria,2K19E@204457|Sphingomonadales	204457|Sphingomonadales	E	peptidase S9	ptrB	-	3.4.21.83	ko:K01354	ko05142,ko05143,map05142,map05143	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S9,Peptidase_S9_N
SRD3_k127_4681985_1	1112216.JH594425_gene1423	5.807e-317	977.0	COG0006@1|root,COG0006@2|Bacteria,1MUZS@1224|Proteobacteria,2TQXN@28211|Alphaproteobacteria,2K0TU@204457|Sphingomonadales	204457|Sphingomonadales	E	aminopeptidase	-	-	3.4.11.9	ko:K01262	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Creatinase_N,Creatinase_N_2,Peptidase_M24,Peptidase_M24_C
SRD3_k127_4681985_2	349521.HCH_01982	3.625e-245	770.0	COG1231@1|root,COG1231@2|Bacteria,1R5ZI@1224|Proteobacteria,1S0X5@1236|Gammaproteobacteria	1236|Gammaproteobacteria	E	Flavin containing amine oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	Amino_oxidase
SRD3_k127_4681985_3	349521.HCH_01981	1.477e-69	244.0	COG3961@1|root,COG3961@2|Bacteria,1MW2F@1224|Proteobacteria,1RQFY@1236|Gammaproteobacteria	1236|Gammaproteobacteria	GH	Belongs to the TPP enzyme family	ipdC	-	4.1.1.1,4.1.1.74	ko:K01568,ko:K04103	ko00010,ko00380,ko01100,ko01110,ko01130,map00010,map00380,map01100,map01110,map01130	-	R00014,R00755,R01974	RC00027,RC00375,RC00506,RC02744	ko00000,ko00001,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
SRD3_k127_4695269_2	1123269.NX02_13545	3.006e-232	735.0	COG2936@1|root,COG2936@2|Bacteria,1MVA8@1224|Proteobacteria,2TU0R@28211|Alphaproteobacteria,2K0WA@204457|Sphingomonadales	204457|Sphingomonadales	E	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain	-	-	-	ko:K06978	-	-	-	-	ko00000	-	-	-	PepX_C,Peptidase_S15
SRD3_k127_4695269_5	1123269.NX02_17610	2.699e-108	361.0	COG4188@1|root,COG4188@2|Bacteria,1NAS2@1224|Proteobacteria,2UPBC@28211|Alphaproteobacteria,2K3SY@204457|Sphingomonadales	204457|Sphingomonadales	S	dienelactone hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4695269_1	1449076.JOOE01000002_gene761	3.164e-255	792.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TRI3@28211|Alphaproteobacteria,2K00Q@204457|Sphingomonadales	204457|Sphingomonadales	C	belongs to the aldehyde dehydrogenase family	ligV	-	-	-	-	-	-	-	-	-	-	-	Aldedh
SRD3_k127_4695269_4	1550073.JROH01000003_gene2406	1.301e-158	509.0	COG1024@1|root,COG1024@2|Bacteria,1MVB1@1224|Proteobacteria,2TVK3@28211|Alphaproteobacteria,2K2WS@204457|Sphingomonadales	204457|Sphingomonadales	I	Catalyzes the conversion of feruloyl-CoA to vanillin and acetyl-CoA	ferB	-	4.1.2.41,4.2.1.101	ko:K18383	ko00360,ko01100,ko01110,map00360,map01100,map01110	-	R05772,R05773	RC00307,RC01468,RC01828	ko00000,ko00001,ko01000	-	-	-	ECH_1
SRD3_k127_4695269_12	1550073.JROH01000003_gene2408	5.006e-50	186.0	COG1846@1|root,COG1846@2|Bacteria,1N7PQ@1224|Proteobacteria,2UF5S@28211|Alphaproteobacteria,2K5FB@204457|Sphingomonadales	204457|Sphingomonadales	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SRD3_k127_4695269_11	365046.Rta_23850	8.547e-53	191.0	COG4119@1|root,COG4119@2|Bacteria,1RHCE@1224|Proteobacteria,2VV6B@28216|Betaproteobacteria	28216|Betaproteobacteria	L	NUDIX domain	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
SRD3_k127_4695269_6	1081640.AGFU01000050_gene730	3.355e-104	348.0	COG2207@1|root,COG2207@2|Bacteria,1QUXX@1224|Proteobacteria,2UI09@28211|Alphaproteobacteria,2K1XW@204457|Sphingomonadales	204457|Sphingomonadales	K	AraC-binding-like domain	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding_2,HTH_18
SRD3_k127_4695269_0	1192759.AKIB01000026_gene2142	0.0	1415.0	COG1629@1|root,COG4773@1|root,COG1629@2|Bacteria,COG4773@2|Bacteria,1R8HM@1224|Proteobacteria,2U3RH@28211|Alphaproteobacteria,2KCYK@204457|Sphingomonadales	204457|Sphingomonadales	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SRD3_k127_4695269_3	1192759.AKIB01000026_gene2143	1.388e-171	549.0	COG1062@1|root,COG1062@2|Bacteria,1MUK4@1224|Proteobacteria,2TUMG@28211|Alphaproteobacteria,2K338@204457|Sphingomonadales	204457|Sphingomonadales	C	Alcohol dehydrogenase GroES-like domain	-	-	1.1.1.90	ko:K00055	ko00350,ko00360,ko00622,ko00623,ko01100,ko01120,ko01220,map00350,map00360,map00622,map00623,map01100,map01120,map01220	M00537,M00538	R01763,R02611,R04304,R05282,R05347,R05348	RC00087,RC00116	ko00000,ko00001,ko00002,ko01000	-	-	-	ADH_N,ADH_zinc_N
SRD3_k127_4695269_8	392499.Swit_1447	4.485e-91	309.0	COG0657@1|root,COG0657@2|Bacteria,1NEXK@1224|Proteobacteria,2U5X1@28211|Alphaproteobacteria,2JZVT@204457|Sphingomonadales	204457|Sphingomonadales	I	PFAM Alpha beta hydrolase fold-3 domain protein	-	-	-	ko:K01066	-	-	-	-	ko00000,ko01000	-	-	-	Abhydrolase_3
SRD3_k127_4695269_7	930166.CD58_07890	4.397e-91	321.0	COG3258@1|root,COG3258@2|Bacteria,1RCK2@1224|Proteobacteria,1SPRI@1236|Gammaproteobacteria	1236|Gammaproteobacteria	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4695269_9	330214.NIDE1618	2.06e-84	293.0	COG1621@1|root,COG1621@2|Bacteria	2|Bacteria	G	Belongs to the glycosyl hydrolase 32 family	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_43
SRD3_k127_4695269_13	1254432.SCE1572_11880	1.566e-18	101.0	COG0500@1|root,COG5653@1|root,COG2226@2|Bacteria,COG5653@2|Bacteria,1N7WR@1224|Proteobacteria,42VU5@68525|delta/epsilon subdivisions,2WSGU@28221|Deltaproteobacteria,2YXKC@29|Myxococcales	28221|Deltaproteobacteria	M	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_6
SRD3_k127_4695269_10	463191.SSEG_08849	8.382e-59	231.0	COG0189@1|root,COG0189@2|Bacteria,2I31U@201174|Actinobacteria	201174|Actinobacteria	HJ	ATP-grasp domain	-	-	-	-	-	-	-	-	-	-	-	-	ATP-grasp_4
SRD3_k127_4695269_14	1449351.RISW2_15220	2.43e-17	91.0	COG2227@1|root,COG2227@2|Bacteria,1PSNI@1224|Proteobacteria,2TV3H@28211|Alphaproteobacteria,4KK0X@93682|Roseivivax	28211|Alphaproteobacteria	H	3-demethylubiquinone-9 3-methyltransferase	ubiG1	-	2.1.1.222,2.1.1.64	ko:K00568	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00117	R04988,R05614,R08769,R08781	RC00003,RC00392,RC01895	ko00000,ko00001,ko00002,ko01000	-	-	-	Methyltransf_11
SRD3_k127_4695269_15	501479.ACNW01000103_gene596	2.677e-17	92.0	COG4424@1|root,COG4424@2|Bacteria,1QGYC@1224|Proteobacteria,2TRKU@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Sulfotransferase	-	-	-	-	-	-	-	-	-	-	-	-	Sulfotransfer_2
SRD3_k127_4705667_4	1112216.JH594425_gene2311	5.209e-183	576.0	COG0557@1|root,COG0557@2|Bacteria,1MUS6@1224|Proteobacteria,2TRC1@28211|Alphaproteobacteria,2K0KI@204457|Sphingomonadales	204457|Sphingomonadales	J	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs	rnr	-	-	ko:K12573	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03016,ko03019	-	-	-	RNB,S1
SRD3_k127_4705667_8	1449076.JOOE01000001_gene2934	1.301e-12	76.0	2AM3M@1|root,32HWV@2|Bacteria,1Q8DC@1224|Proteobacteria,2VEJY@28211|Alphaproteobacteria,2K81A@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4705667_9	1123267.JONN01000001_gene853	1.099e-10	66.0	2AM3M@1|root,32HWV@2|Bacteria,1Q8DC@1224|Proteobacteria,2VEJY@28211|Alphaproteobacteria,2K81A@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4705667_3	1112214.AHIS01000102_gene1598	4.737e-213	665.0	COG3268@1|root,COG3268@2|Bacteria,1MVI3@1224|Proteobacteria,2TV1G@28211|Alphaproteobacteria,2K2KQ@204457|Sphingomonadales	204457|Sphingomonadales	S	Saccharopine dehydrogenase NADP binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Sacchrp_dh_NADP
SRD3_k127_4705667_6	1207055.C100_12810	1.109e-116	381.0	COG0625@1|root,COG0625@2|Bacteria,1NE6Z@1224|Proteobacteria,2U6F7@28211|Alphaproteobacteria,2KD15@204457|Sphingomonadales	204457|Sphingomonadales	O	Glutathione S-transferase, N-terminal domain	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_N
SRD3_k127_4705667_7	1144307.PMI04_04241	5.154e-58	205.0	COG1846@1|root,COG1846@2|Bacteria,1N7G0@1224|Proteobacteria,2UA2S@28211|Alphaproteobacteria,2K4X2@204457|Sphingomonadales	204457|Sphingomonadales	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SRD3_k127_4705667_0	1379701.JPJC01000175_gene930	5.458e-289	896.0	COG1132@1|root,COG1132@2|Bacteria,1MUBM@1224|Proteobacteria,2TQMR@28211|Alphaproteobacteria,2K0VT@204457|Sphingomonadales	204457|Sphingomonadales	V	ABC-type multidrug transport system, ATPase and permease	-	-	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
SRD3_k127_4705667_1	1112212.JH584235_gene3499	1.053e-234	731.0	COG4553@1|root,COG4553@2|Bacteria,1MVUH@1224|Proteobacteria,2TQXW@28211|Alphaproteobacteria,2K1W9@204457|Sphingomonadales	204457|Sphingomonadales	I	de-polymerase	phaZ	-	3.1.1.75	ko:K05973	ko00650,map00650	-	R05118	-	ko00000,ko00001,ko01000	-	-	-	PHB_depo_C
SRD3_k127_4705667_5	1449076.JOOE01000001_gene2927	3.984e-120	394.0	COG0837@1|root,COG0837@2|Bacteria,1MVFI@1224|Proteobacteria,2U0CA@28211|Alphaproteobacteria,2K4M5@204457|Sphingomonadales	204457|Sphingomonadales	G	Glucokinase	-	-	-	-	-	-	-	-	-	-	-	-	Glucokinase
SRD3_k127_4705667_2	1112214.AHIS01000102_gene1594	8.827e-226	704.0	COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,2TQQ7@28211|Alphaproteobacteria,2K0V0@204457|Sphingomonadales	204457|Sphingomonadales	I	Belongs to the thiolase family	-	-	2.3.1.16,2.3.1.9	ko:K00626,ko:K00632	ko00071,ko00072,ko00280,ko00281,ko00310,ko00362,ko00380,ko00592,ko00620,ko00630,ko00640,ko00642,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00281,map00310,map00362,map00380,map00592,map00620,map00630,map00640,map00642,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00087,M00088,M00095,M00113,M00373,M00374,M00375	R00238,R00829,R00927,R01177,R03778,R03858,R03991,R04546,R04742,R04747,R05506,R05586,R07891,R07895,R07899,R08091,R08095	RC00004,RC00326,RC00405,RC01702,RC02728,RC02898,RC02955	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
SRD3_k127_4705667_10	1112214.AHIS01000092_gene495	1.265e-08	57.0	COG0587@1|root,COG0587@2|Bacteria,1MUIF@1224|Proteobacteria,2TSCN@28211|Alphaproteobacteria,2K1R8@204457|Sphingomonadales	204457|Sphingomonadales	L	DNA polymerase	dnaE	-	2.7.7.7	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_alpha,HHH_6,PHP
SRD3_k127_4764639_2	1248916.ANFY01000011_gene1224	4.748e-27	119.0	COG1670@1|root,COG1670@2|Bacteria,1NCS4@1224|Proteobacteria	1224|Proteobacteria	J	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3
SRD3_k127_4764639_1	748247.AZKH_p0309	9.668e-126	431.0	COG0642@1|root,COG0784@1|root,COG4192@1|root,COG0784@2|Bacteria,COG2205@2|Bacteria,COG4192@2|Bacteria,1NRP8@1224|Proteobacteria,2VGZQ@28216|Betaproteobacteria	28216|Betaproteobacteria	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	CHASE,HATPase_c,HisKA,Hpt,PAS_3,PAS_4,PAS_9,Response_reg
SRD3_k127_4764639_0	194867.ALBQ01000013_gene847	2.857e-273	859.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,2K0SK@204457|Sphingomonadales	204457|Sphingomonadales	T	Putative diguanylate phosphodiesterase	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,PAS_8,Response_reg
SRD3_k127_4793173_3	1081640.AGFU01000016_gene1675	2.464e-87	290.0	COG0192@1|root,COG0192@2|Bacteria,1MUFQ@1224|Proteobacteria,2TR4P@28211|Alphaproteobacteria,2K02E@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme	metK	-	2.5.1.6	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	M00034,M00035,M00368,M00609	R00177,R04771	RC00021,RC01211	ko00000,ko00001,ko00002,ko01000	-	-	-	S-AdoMet_synt_C,S-AdoMet_synt_M,S-AdoMet_synt_N
SRD3_k127_4793173_2	1123267.JONN01000001_gene804	8.069e-124	399.0	COG0220@1|root,COG0220@2|Bacteria,1MUWJ@1224|Proteobacteria,2TUU9@28211|Alphaproteobacteria,2K0BM@204457|Sphingomonadales	204457|Sphingomonadales	J	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA	trmB	-	2.1.1.33	ko:K03439	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Methyltransf_4
SRD3_k127_4793173_0	1234595.C725_0760	7.76e-152	500.0	COG0038@1|root,COG0038@2|Bacteria,1MV4K@1224|Proteobacteria,2TT6V@28211|Alphaproteobacteria,4BRRU@82117|unclassified Alphaproteobacteria	28211|Alphaproteobacteria	P	Voltage gated chloride channel	-	-	-	-	-	-	-	-	-	-	-	-	Voltage_CLC
SRD3_k127_4793173_1	1090319.KE386571_gene103	3.352e-134	439.0	COG2133@1|root,COG2133@2|Bacteria,1MV2E@1224|Proteobacteria,2TR47@28211|Alphaproteobacteria,2K0QG@204457|Sphingomonadales	204457|Sphingomonadales	G	glucose sorbosone	-	-	-	-	-	-	-	-	-	-	-	-	GSDH
SRD3_k127_4829389_6	1380394.JADL01000005_gene5623	2.989e-119	391.0	COG1028@1|root,COG1028@2|Bacteria,1MW9A@1224|Proteobacteria,2TRDT@28211|Alphaproteobacteria,2JRRV@204441|Rhodospirillales	204441|Rhodospirillales	IQ	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SRD3_k127_4829389_3	1282360.ABAC460_05840	1.356e-145	474.0	COG2199@1|root,COG3706@2|Bacteria,1R7HC@1224|Proteobacteria,2TQQM@28211|Alphaproteobacteria	28211|Alphaproteobacteria	T	response regulator containing a CheY-like receiver domain and a GGDEF domain	-	-	-	-	-	-	-	-	-	-	-	-	GGDEF,Reg_prop,dCache_1
SRD3_k127_4829389_8	1123269.NX02_01760	5.565e-70	243.0	COG3738@1|root,COG3738@2|Bacteria,1RE1M@1224|Proteobacteria,2U9JW@28211|Alphaproteobacteria,2KA4Q@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF1287)	-	-	-	ko:K09974	-	-	-	-	ko00000	-	-	-	DUF1287
SRD3_k127_4829389_11	288000.BBta_3587	1.842e-25	120.0	COG4219@1|root,COG4219@2|Bacteria,1R8I7@1224|Proteobacteria,2U1KK@28211|Alphaproteobacteria,3JS1Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KT	BlaR1 peptidase M56	-	-	-	-	-	-	-	-	-	-	-	-	DUF3471,Peptidase_M56
SRD3_k127_4829389_5	192952.MM_3198	8.792e-131	437.0	COG1073@1|root,arCOG01661@2157|Archaea,2XVIC@28890|Euryarchaeota,2NANZ@224756|Methanomicrobia	224756|Methanomicrobia	S	Alpha/beta hydrolase family	-	-	-	ko:K06889	-	-	-	-	ko00000	-	-	-	Peptidase_S9
SRD3_k127_4829389_9	314266.SKA58_05835	1.565e-33	136.0	2BSMF@1|root,32MQ0@2|Bacteria,1P2MI@1224|Proteobacteria,2UUGP@28211|Alphaproteobacteria,2K7G3@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4829389_1	1248760.ANFZ01000009_gene1115	1.093e-184	582.0	COG0596@1|root,COG0596@2|Bacteria,1MWW8@1224|Proteobacteria,2TS53@28211|Alphaproteobacteria,2K07Z@204457|Sphingomonadales	204457|Sphingomonadales	E	Belongs to the peptidase S33 family	-	-	3.4.11.5	ko:K01259	ko00330,map00330	-	R00135	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Abhydrolase_1
SRD3_k127_4829389_2	1112212.JH584235_gene1338	6.571e-176	562.0	COG4346@1|root,COG4346@2|Bacteria,1QHX0@1224|Proteobacteria,2TVG5@28211|Alphaproteobacteria,2K03Y@204457|Sphingomonadales	204457|Sphingomonadales	O	C-terminal four TMM region of protein-O-mannosyltransferase	-	-	2.4.1.109	ko:K00728	ko00514,ko00515,ko01100,map00514,map00515,map01100	-	R04072,R07620,R11399	RC00005,RC00059,RC00397	ko00000,ko00001,ko01000,ko01003	-	GT39	-	PMT,PMT_2,PMT_4TMC
SRD3_k127_4829389_0	1112212.JH584235_gene1337	5.884e-238	738.0	COG0626@1|root,COG0626@2|Bacteria,1MU57@1224|Proteobacteria,2TTMF@28211|Alphaproteobacteria,2K056@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide	metZ	-	2.5.1.48	ko:K01739,ko:K10764	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	M00017	R00999,R01288,R02508,R03217,R03260,R04944,R04945,R04946	RC00020,RC00056,RC00069,RC00420,RC02848,RC02866	ko00000,ko00001,ko00002,ko01000	-	-	-	Cys_Met_Meta_PP
SRD3_k127_4829389_7	194867.ALBQ01000020_gene2862	7.521e-71	246.0	COG2967@1|root,COG2967@2|Bacteria,1MZ2Z@1224|Proteobacteria,2U9JM@28211|Alphaproteobacteria,2K4GR@204457|Sphingomonadales	204457|Sphingomonadales	P	protein affecting Mg2 Co2 transport	apaG	-	-	ko:K06195	-	-	-	-	ko00000	-	-	-	DUF525
SRD3_k127_4829389_4	1112212.JH584235_gene1335	9.379e-141	452.0	COG0583@1|root,COG0583@2|Bacteria,1MWY0@1224|Proteobacteria,2U2F2@28211|Alphaproteobacteria,2K1M3@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	-	-	-	ko:K03566	ko02026,map02026	-	-	-	ko00000,ko00001,ko03000	-	-	-	HTH_1,LysR_substrate
SRD3_k127_4829389_10	1550073.JROH01000047_gene3014	4.296e-32	132.0	COG1670@1|root,COG1670@2|Bacteria,1NPWU@1224|Proteobacteria,2U9QS@28211|Alphaproteobacteria,2K49P@204457|Sphingomonadales	204457|Sphingomonadales	J	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3
SRD3_k127_4903640_5	1112212.JH584235_gene1945	4.431e-23	99.0	COG0821@1|root,COG0821@2|Bacteria,1MUAX@1224|Proteobacteria,2TQSI@28211|Alphaproteobacteria,2K1FA@204457|Sphingomonadales	204457|Sphingomonadales	I	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate	ispG	-	1.17.7.1,1.17.7.3	ko:K03526	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R08689,R10859	RC01486	ko00000,ko00001,ko00002,ko01000	-	-	-	GcpE
SRD3_k127_4903640_4	1449076.JOOE01000004_gene460	2.688e-68	253.0	COG3279@1|root,COG3279@2|Bacteria,1R90R@1224|Proteobacteria,2UAG2@28211|Alphaproteobacteria,2K62Z@204457|Sphingomonadales	204457|Sphingomonadales	KT	LytTr DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR
SRD3_k127_4903640_1	1112216.JH594425_gene1154	1.463e-136	445.0	COG1835@1|root,COG1835@2|Bacteria,1R4CU@1224|Proteobacteria,2U2AF@28211|Alphaproteobacteria,2K116@204457|Sphingomonadales	204457|Sphingomonadales	I	Acyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
SRD3_k127_4903640_0	1112216.JH594425_gene1154	3.278e-163	521.0	COG1835@1|root,COG1835@2|Bacteria,1R4CU@1224|Proteobacteria,2U2AF@28211|Alphaproteobacteria,2K116@204457|Sphingomonadales	204457|Sphingomonadales	I	Acyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
SRD3_k127_4903640_3	1112214.AHIS01000042_gene3110	1.665e-131	430.0	COG1446@1|root,COG1446@2|Bacteria,1MWFC@1224|Proteobacteria,2TU8K@28211|Alphaproteobacteria,2K0JU@204457|Sphingomonadales	204457|Sphingomonadales	E	Asparaginase	-	-	3.4.19.5	ko:K13051	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Asparaginase_2
SRD3_k127_4903640_2	1112216.JH594425_gene850	1.392e-133	431.0	28JIP@1|root,2ZCBM@2|Bacteria,1RC17@1224|Proteobacteria,2U5Q1@28211|Alphaproteobacteria,2K1HP@204457|Sphingomonadales	204457|Sphingomonadales	S	S1/P1 Nuclease	-	-	-	-	-	-	-	-	-	-	-	-	S1-P1_nuclease
SRD3_k127_4903640_6	1112212.JH584235_gene1950	1.95e-18	86.0	2AM6W@1|root,31C1H@2|Bacteria,1Q7ZT@1224|Proteobacteria,2VE5I@28211|Alphaproteobacteria,2K706@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4924199_6	1112216.JH594425_gene1941	6.795e-200	633.0	COG1538@1|root,COG1538@2|Bacteria,1MUA8@1224|Proteobacteria,2TSN8@28211|Alphaproteobacteria,2K0P4@204457|Sphingomonadales	204457|Sphingomonadales	M	PFAM Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
SRD3_k127_4924199_0	1112214.AHIS01000106_gene3997	0.0	1751.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,2K02H@204457|Sphingomonadales	204457|Sphingomonadales	V	Efflux pump membrane transporter	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
SRD3_k127_4924199_7	1112212.JH584235_gene1585	2.923e-194	613.0	COG0845@1|root,COG0845@2|Bacteria,1MU78@1224|Proteobacteria,2TSWK@28211|Alphaproteobacteria,2K12P@204457|Sphingomonadales	204457|Sphingomonadales	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	-	-	-	-	-	-	-	-	-	HlyD_D23
SRD3_k127_4924199_12	1346791.M529_07235	8.157e-144	464.0	COG1917@1|root,COG1917@2|Bacteria,1NTJ5@1224|Proteobacteria,2UP17@28211|Alphaproteobacteria,2K9RX@204457|Sphingomonadales	204457|Sphingomonadales	S	Cupin domain	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
SRD3_k127_4924199_11	629773.AORY01000004_gene71	1.085e-144	470.0	COG2152@1|root,COG2152@2|Bacteria,1NQQZ@1224|Proteobacteria,2UPNQ@28211|Alphaproteobacteria,2K2WV@204457|Sphingomonadales	204457|Sphingomonadales	G	beta-1,4-mannooligosaccharide phosphorylase	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_130
SRD3_k127_4924199_19	1112214.AHIS01000077_gene3794	7.796e-90	302.0	COG1028@1|root,COG1028@2|Bacteria,1Q7EW@1224|Proteobacteria,2TSMG@28211|Alphaproteobacteria,2K15S@204457|Sphingomonadales	204457|Sphingomonadales	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SRD3_k127_4924199_18	1114964.L485_19660	6.57e-96	327.0	28H8Z@1|root,2Z7KS@2|Bacteria,1MW9T@1224|Proteobacteria,2U5RX@28211|Alphaproteobacteria,2K5KG@204457|Sphingomonadales	204457|Sphingomonadales	S	Yip1 domain	-	-	-	-	-	-	-	-	-	-	-	-	Yip1
SRD3_k127_4924199_3	1112216.JH594425_gene3655	1.111e-306	952.0	COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,1MUJ3@1224|Proteobacteria,2U2CJ@28211|Alphaproteobacteria,2KD2X@204457|Sphingomonadales	204457|Sphingomonadales	EU	COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases	-	-	-	-	-	-	-	-	-	-	-	-	PD40,Peptidase_S9
SRD3_k127_4924199_10	1112212.JH584235_gene1517	3.91e-146	470.0	COG3773@1|root,COG3773@2|Bacteria,1MWX3@1224|Proteobacteria,2TT15@28211|Alphaproteobacteria,2K0Z3@204457|Sphingomonadales	204457|Sphingomonadales	M	Cell Wall	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_2
SRD3_k127_4924199_1	1112212.JH584235_gene1516	0.0	1320.0	COG0612@1|root,COG0612@2|Bacteria,1MVST@1224|Proteobacteria,2TRFB@28211|Alphaproteobacteria,2K2A4@204457|Sphingomonadales	204457|Sphingomonadales	S	Peptidase, M16	-	-	-	ko:K07263	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M16,Peptidase_M16_C
SRD3_k127_4924199_30	1248917.ANFX01000008_gene326	1.131e-21	100.0	COG1846@1|root,COG1846@2|Bacteria,1NYW3@1224|Proteobacteria,2UTVX@28211|Alphaproteobacteria,2K6HH@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_27
SRD3_k127_4924199_27	1502850.FG91_01749	1.319e-36	151.0	COG1846@1|root,COG2003@1|root,COG1846@2|Bacteria,COG2003@2|Bacteria,1RC0U@1224|Proteobacteria,2U5NJ@28211|Alphaproteobacteria,2K3YK@204457|Sphingomonadales	204457|Sphingomonadales	KL	RadC-like JAB domain	-	-	-	-	-	-	-	-	-	-	-	-	MarR_2,RadC
SRD3_k127_4924199_31	392499.Swit_0394	3.342e-17	88.0	COG2197@1|root,COG2197@2|Bacteria,1NMZW@1224|Proteobacteria,2VDU4@28211|Alphaproteobacteria,2K629@204457|Sphingomonadales	204457|Sphingomonadales	KT	Bacterial regulatory proteins, luxR family	-	-	-	-	-	-	-	-	-	-	-	-	GerE
SRD3_k127_4924199_4	1112216.JH594425_gene3651	5.388e-219	682.0	COG0343@1|root,COG0343@2|Bacteria,1MUCA@1224|Proteobacteria,2TR87@28211|Alphaproteobacteria,2K0II@204457|Sphingomonadales	204457|Sphingomonadales	J	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)	tgt	-	2.4.2.29	ko:K00773	-	-	R03789,R10209	RC00063	ko00000,ko01000,ko03016	-	-	-	TGT
SRD3_k127_4924199_22	1449076.JOOE01000003_gene3380	5.961e-72	251.0	COG1917@1|root,COG1917@2|Bacteria,1MZNT@1224|Proteobacteria,2UCC4@28211|Alphaproteobacteria,2K7AU@204457|Sphingomonadales	204457|Sphingomonadales	S	Cupin domain	-	-	-	ko:K11312	-	-	-	-	ko00000	-	-	-	Cupin_2
SRD3_k127_4924199_14	1123060.JONP01000005_gene5564	8.085e-103	341.0	COG1216@1|root,COG1216@2|Bacteria,1RDAV@1224|Proteobacteria	1224|Proteobacteria	S	Glycosyl transferase family 2	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
SRD3_k127_4924199_23	1123060.JONP01000005_gene5560	1.611e-57	209.0	COG1209@1|root,COG1209@2|Bacteria,1RDR2@1224|Proteobacteria	1224|Proteobacteria	M	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon	-	-	-	-	-	-	-	-	-	-	-	-	NTP_transf_3,NTP_transferase
SRD3_k127_4924199_15	1123060.JONP01000005_gene5561	1.615e-101	354.0	COG2334@1|root,COG2334@2|Bacteria	2|Bacteria	S	homoserine kinase activity	-	-	-	-	-	-	-	-	-	-	-	-	APH,LPG_synthase_TM
SRD3_k127_4924199_26	1123060.JONP01000005_gene5562	6.25e-38	149.0	COG0637@1|root,COG0637@2|Bacteria,1PUMZ@1224|Proteobacteria,2U52Q@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	haloacid dehalogenase-like hydrolase	-	-	3.1.3.18	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	-	R01334	RC00017	ko00000,ko00001,ko01000	-	-	-	HAD_2
SRD3_k127_4924199_13	1123269.NX02_29100	2.671e-104	349.0	COG0454@1|root,COG1846@1|root,COG0456@2|Bacteria,COG1846@2|Bacteria,1MWIC@1224|Proteobacteria,2TRIA@28211|Alphaproteobacteria,2K07R@204457|Sphingomonadales	204457|Sphingomonadales	K	MarR family	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,MarR_2
SRD3_k127_4924199_21	1112214.AHIS01000061_gene2833	3.307e-83	282.0	COG0546@1|root,COG0546@2|Bacteria,1R6SG@1224|Proteobacteria,2TUUY@28211|Alphaproteobacteria,2K3UT@204457|Sphingomonadales	204457|Sphingomonadales	S	haloacid dehalogenase-like hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	HAD_2
SRD3_k127_4924199_24	1112212.JH584235_gene1498	8.162e-55	197.0	2AKNZ@1|root,31BFK@2|Bacteria,1Q7AC@1224|Proteobacteria,2VDEV@28211|Alphaproteobacteria,2K564@204457|Sphingomonadales	204457|Sphingomonadales	S	EF hand	-	-	-	-	-	-	-	-	-	-	-	-	EF-hand_5
SRD3_k127_4924199_8	1090320.KB900605_gene1575	4.694e-190	602.0	COG0809@1|root,COG0809@2|Bacteria,1MUH3@1224|Proteobacteria,2TS0D@28211|Alphaproteobacteria,2K0G0@204457|Sphingomonadales	204457|Sphingomonadales	J	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)	queA	-	2.4.99.17	ko:K07568	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Queuosine_synth
SRD3_k127_4924199_16	1379701.JPJC01000095_gene2329	3.893e-99	331.0	COG0652@1|root,COG0652@2|Bacteria,1R9ZQ@1224|Proteobacteria,2U591@28211|Alphaproteobacteria,2KCVY@204457|Sphingomonadales	204457|Sphingomonadales	O	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides	-	-	-	-	-	-	-	-	-	-	-	-	Pro_isomerase
SRD3_k127_4924199_20	1112212.JH584235_gene1501	9.051e-90	304.0	COG0669@1|root,COG0669@2|Bacteria,1RD9F@1224|Proteobacteria,2U74H@28211|Alphaproteobacteria,2K1RJ@204457|Sphingomonadales	204457|Sphingomonadales	H	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate	coaD	-	2.7.7.3	ko:K00954	ko00770,ko01100,map00770,map01100	M00120	R03035	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_like
SRD3_k127_4924199_9	1112214.AHIS01000061_gene2828	4.46e-170	540.0	COG0142@1|root,COG0142@2|Bacteria,1MWNG@1224|Proteobacteria,2TR79@28211|Alphaproteobacteria,2K19H@204457|Sphingomonadales	204457|Sphingomonadales	H	Belongs to the FPP GGPP synthase family	ispA	-	2.5.1.1,2.5.1.10	ko:K00795	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00364	R01658,R02003	RC00279	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	polyprenyl_synt
SRD3_k127_4924199_28	1112214.AHIS01000061_gene2827	3.518e-33	130.0	COG1722@1|root,COG1722@2|Bacteria,1PTYQ@1224|Proteobacteria,2UFD6@28211|Alphaproteobacteria,2K6WZ@204457|Sphingomonadales	204457|Sphingomonadales	L	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides	xseB	-	3.1.11.6	ko:K03602	ko03430,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exonuc_VII_S
SRD3_k127_4924199_33	317655.Sala_2093	7.963e-17	83.0	COG3609@1|root,COG3609@2|Bacteria,1N8FQ@1224|Proteobacteria,2UHZE@28211|Alphaproteobacteria,2KCBB@204457|Sphingomonadales	204457|Sphingomonadales	K	Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH	-	-	-	ko:K07746	-	-	-	-	ko00000,ko02048	-	-	-	ParD_antitoxin
SRD3_k127_4924199_29	1114964.L485_08820	1.069e-21	97.0	COG3668@1|root,COG3668@2|Bacteria	2|Bacteria	D	Plasmid stabilization system	-	-	-	ko:K19092	-	-	-	-	ko00000,ko02048	-	-	-	ParE_toxin
SRD3_k127_4924199_2	1112214.AHIS01000061_gene2819	2.984e-309	953.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,2K001@204457|Sphingomonadales	204457|Sphingomonadales	IQ	COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II	-	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
SRD3_k127_4924199_32	1112212.JH584235_gene1508	3.69e-17	83.0	2APE4@1|root,31EGR@2|Bacteria,1QBSS@1224|Proteobacteria,2VEEN@28211|Alphaproteobacteria,2K7QK@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4924199_5	1112214.AHIS01000061_gene2821	4.304e-215	681.0	COG2199@1|root,COG3706@2|Bacteria,1MWHH@1224|Proteobacteria,2UP4W@28211|Alphaproteobacteria,2K1QZ@204457|Sphingomonadales	204457|Sphingomonadales	T	7TM diverse intracellular signalling	-	-	-	-	-	-	-	-	-	-	-	-	7TMR-DISM_7TM,GGDEF
SRD3_k127_4924199_17	1112212.JH584235_gene1506	8.877e-99	323.0	COG0542@1|root,COG0542@2|Bacteria,1MV8B@1224|Proteobacteria,2TQUZ@28211|Alphaproteobacteria,2K0MN@204457|Sphingomonadales	204457|Sphingomonadales	O	Belongs to the ClpA ClpB family	clpA	-	-	ko:K03694	-	-	-	-	ko00000,ko03110	-	-	-	AAA,AAA_2,ClpB_D2-small,Clp_N
SRD3_k127_4926972_7	1112212.JH584235_gene3421	4.275e-52	186.0	COG3369@1|root,COG3369@2|Bacteria,1RE35@1224|Proteobacteria,2TX5Q@28211|Alphaproteobacteria,2K86A@204457|Sphingomonadales	204457|Sphingomonadales	S	Ferritin-like	-	-	-	-	-	-	-	-	-	-	-	-	Ferritin-like
SRD3_k127_4926972_3	1123269.NX02_26585	9.798e-146	466.0	COG0583@1|root,COG0583@2|Bacteria,1MWY0@1224|Proteobacteria,2TU4E@28211|Alphaproteobacteria,2K07U@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	gcvA	-	-	ko:K03566	ko02026,map02026	-	-	-	ko00000,ko00001,ko03000	-	-	-	HTH_1,LysR_substrate
SRD3_k127_4926972_5	1123269.NX02_26575	3.004e-116	379.0	COG2513@1|root,COG2513@2|Bacteria,1R3SD@1224|Proteobacteria,2TRRV@28211|Alphaproteobacteria,2KD4B@204457|Sphingomonadales	204457|Sphingomonadales	G	Phosphoenolpyruvate phosphomutase	-	-	-	-	-	-	-	-	-	-	-	-	PEP_mutase
SRD3_k127_4926972_0	452662.SJA_C2-05770	0.0	1332.0	COG0376@1|root,COG0376@2|Bacteria,1MUBF@1224|Proteobacteria,2TQJ7@28211|Alphaproteobacteria,2K0B7@204457|Sphingomonadales	204457|Sphingomonadales	P	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity	katG	-	1.11.1.21	ko:K03782	ko00360,ko00380,ko00940,ko00983,ko01100,ko01110,map00360,map00380,map00940,map00983,map01100,map01110	-	R00602,R00698,R02596,R02670,R03919,R04007,R07443,R11906	RC00034,RC00213,RC00767,RC02141	ko00000,ko00001,ko01000	-	-	-	peroxidase
SRD3_k127_4926972_1	1379701.JPJC01000008_gene3448	1.71e-223	698.0	COG2133@1|root,COG2133@2|Bacteria,1MVK5@1224|Proteobacteria,2TRN9@28211|Alphaproteobacteria,2K068@204457|Sphingomonadales	204457|Sphingomonadales	G	sorbosone	-	-	-	-	-	-	-	-	-	-	-	-	GSDH
SRD3_k127_4926972_8	1112216.JH594425_gene1499	1.974e-35	140.0	2E9WT@1|root,3342I@2|Bacteria,1NBEH@1224|Proteobacteria,2UFGC@28211|Alphaproteobacteria,2K6FB@204457|Sphingomonadales	204457|Sphingomonadales	S	Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn)	-	-	-	-	-	-	-	-	-	-	-	-	PHA_gran_rgn
SRD3_k127_4926972_6	1219049.SP5_070_00690	5.593e-71	263.0	COG3565@1|root,COG3565@2|Bacteria,1RD7C@1224|Proteobacteria,2U78G@28211|Alphaproteobacteria,2K4FM@204457|Sphingomonadales	204457|Sphingomonadales	S	dioxygenase of extradiol dioxygenase family	-	-	-	ko:K06991	-	-	-	-	ko00000	-	-	-	Glyoxalase
SRD3_k127_4926972_2	1112216.JH594425_gene1501	8.848e-199	640.0	COG0815@1|root,COG0815@2|Bacteria,1MUBU@1224|Proteobacteria,2TQRC@28211|Alphaproteobacteria,2K1Y8@204457|Sphingomonadales	204457|Sphingomonadales	M	Transfers the fatty acyl group on membrane lipoproteins	lnt	-	-	ko:K03820	-	-	-	-	ko00000,ko01000	-	GT2	-	CN_hydrolase
SRD3_k127_4926972_4	685778.AORL01000010_gene2610	1.387e-133	429.0	COG0192@1|root,COG0192@2|Bacteria,1MUFQ@1224|Proteobacteria,2TR4P@28211|Alphaproteobacteria,2K02E@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme	metK	-	2.5.1.6	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	M00034,M00035,M00368,M00609	R00177,R04771	RC00021,RC01211	ko00000,ko00001,ko00002,ko01000	-	-	-	S-AdoMet_synt_C,S-AdoMet_synt_M,S-AdoMet_synt_N
SRD3_k127_4934803_3	1123269.NX02_17580	1.525e-169	542.0	COG1506@1|root,COG1506@2|Bacteria,1R968@1224|Proteobacteria,2TXT1@28211|Alphaproteobacteria,2K2XT@204457|Sphingomonadales	204457|Sphingomonadales	E	Tannase and feruloyl esterase	-	-	-	-	-	-	-	-	-	-	-	-	Tannase
SRD3_k127_4934803_0	1123269.NX02_17585	0.0	1202.0	COG1629@1|root,COG4771@2|Bacteria,1MU9K@1224|Proteobacteria,2TTN6@28211|Alphaproteobacteria,2K1BR@204457|Sphingomonadales	204457|Sphingomonadales	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,STN,TonB_dep_Rec
SRD3_k127_4934803_5	1470591.BW41_01699	2.301e-146	474.0	2A9JY@1|root,30YSD@2|Bacteria,1NS3Y@1224|Proteobacteria,2UQ5A@28211|Alphaproteobacteria,2K8EH@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4934803_1	279238.Saro_3411	1.218e-196	618.0	COG2843@1|root,COG2843@2|Bacteria,1P1MG@1224|Proteobacteria,2TV4X@28211|Alphaproteobacteria	28211|Alphaproteobacteria	M	of poly-gamma-glutamate biosynthesis (Capsule formation)	-	-	-	ko:K07282	-	-	-	-	ko00000	-	-	-	PGA_cap
SRD3_k127_4934803_4	1123269.NX02_03010	9.346e-153	494.0	COG1073@1|root,COG1073@2|Bacteria,1PJ68@1224|Proteobacteria,2UMVY@28211|Alphaproteobacteria,2K8PN@204457|Sphingomonadales	204457|Sphingomonadales	S	alpha beta	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4934803_11	1382230.ASAP_1647	1.182e-27	117.0	COG0793@1|root,COG0793@2|Bacteria,1R0PD@1224|Proteobacteria,2TYSP@28211|Alphaproteobacteria	28211|Alphaproteobacteria	M	Peptidase family S41	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S41
SRD3_k127_4934803_10	1123269.NX02_13555	1.383e-35	141.0	COG1846@1|root,COG1846@2|Bacteria,1N74D@1224|Proteobacteria,2UHQE@28211|Alphaproteobacteria,2K6WS@204457|Sphingomonadales	204457|Sphingomonadales	K	MarR family	-	-	-	-	-	-	-	-	-	-	-	-	MarR_2
SRD3_k127_4934803_12	1123269.NX02_13560	5.495e-24	108.0	2BPVP@1|root,32IPD@2|Bacteria,1QEVK@1224|Proteobacteria,2UZ9D@28211|Alphaproteobacteria,2K8CJ@204457|Sphingomonadales	204457|Sphingomonadales	S	Tripartite ATP-independent periplasmic transporters, DctQ component	-	-	-	-	-	-	-	-	-	-	-	-	DctQ
SRD3_k127_4934803_2	1470591.BW41_02327	1.412e-176	567.0	COG1593@1|root,COG1593@2|Bacteria,1MU0F@1224|Proteobacteria,2TQNK@28211|Alphaproteobacteria,2K13H@204457|Sphingomonadales	204457|Sphingomonadales	G	Tripartite ATP-independent periplasmic transporter, DctM component	-	-	-	-	-	-	-	-	-	-	-	-	DctM
SRD3_k127_4934803_7	1123269.NX02_13570	3.249e-112	372.0	COG1638@1|root,COG1638@2|Bacteria,1MVHI@1224|Proteobacteria,2U9UX@28211|Alphaproteobacteria,2K2XK@204457|Sphingomonadales	204457|Sphingomonadales	G	Bacterial extracellular solute-binding protein, family 7	-	-	-	-	-	-	-	-	-	-	-	-	DctP
SRD3_k127_4934803_6	1123501.KB902276_gene1365	2.67e-142	469.0	COG1804@1|root,COG1804@2|Bacteria,1NSWZ@1224|Proteobacteria,2U2UE@28211|Alphaproteobacteria	28211|Alphaproteobacteria	C	dehydratase	-	-	-	-	-	-	-	-	-	-	-	-	CoA_transf_3
SRD3_k127_4934803_8	1123501.KB902276_gene1366	1.268e-83	289.0	COG1804@1|root,COG1804@2|Bacteria,1RKT4@1224|Proteobacteria	1224|Proteobacteria	C	CoA-transferase family III	-	-	-	-	-	-	-	-	-	-	-	-	CoA_transf_3
SRD3_k127_4934803_9	1123501.KB902276_gene1367	1.782e-38	158.0	COG1804@1|root,COG1804@2|Bacteria,1Q3F3@1224|Proteobacteria,2TRN2@28211|Alphaproteobacteria	28211|Alphaproteobacteria	C	CoA-transferase family III	-	-	-	-	-	-	-	-	-	-	-	-	CoA_transf_3
SRD3_k127_4939167_4	1112212.JH584235_gene1972	5.686e-107	354.0	COG0438@1|root,COG0438@2|Bacteria,1R8IQ@1224|Proteobacteria,2U842@28211|Alphaproteobacteria,2K1KJ@204457|Sphingomonadales	204457|Sphingomonadales	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
SRD3_k127_4939167_2	1379701.JPJC01000159_gene1115	8.668e-124	405.0	2EDGC@1|root,337CJ@2|Bacteria,1RE5R@1224|Proteobacteria,2U8YS@28211|Alphaproteobacteria,2K1JN@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4939167_6	1112214.AHIS01000044_gene1886	8.361e-74	252.0	COG4704@1|root,COG4704@2|Bacteria,1RITF@1224|Proteobacteria,2UAIQ@28211|Alphaproteobacteria,2K5C0@204457|Sphingomonadales	204457|Sphingomonadales	S	Uncharacterized protein conserved in bacteria (DUF2141)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2141
SRD3_k127_4939167_0	1112216.JH594425_gene846	9.04e-214	671.0	COG0438@1|root,COG0438@2|Bacteria,1NU0D@1224|Proteobacteria,2U2M4@28211|Alphaproteobacteria,2K040@204457|Sphingomonadales	204457|Sphingomonadales	M	Glycosyltransferase Family 4	-	-	-	ko:K14335	-	-	-	-	ko00000,ko01000,ko01003	-	GT4	-	Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1
SRD3_k127_4939167_1	1112214.AHIS01000045_gene1870	2.993e-156	511.0	COG1807@1|root,COG1807@2|Bacteria,1NNG9@1224|Proteobacteria,2UMUM@28211|Alphaproteobacteria,2JZWB@204457|Sphingomonadales	204457|Sphingomonadales	M	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family	-	-	-	-	-	-	-	-	-	-	-	-	PMT_2
SRD3_k127_4939167_7	317013.NY99_10645	1.249e-33	148.0	COG2890@1|root,COG2890@2|Bacteria	2|Bacteria	J	protein-(glutamine-N5) methyltransferase activity	-	-	2.1.1.298	ko:K07320	-	-	R10806	RC00003,RC03279	ko00000,ko01000,ko03009	-	-	-	Methyltransf_25,Methyltransf_31
SRD3_k127_4939167_3	1206777.B195_01720	4.543e-117	405.0	COG1835@1|root,COG1835@2|Bacteria,1MV2W@1224|Proteobacteria,1RQS2@1236|Gammaproteobacteria,1Z6HK@136849|Pseudomonas syringae group	1236|Gammaproteobacteria	M	Acyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
SRD3_k127_4939167_5	1198114.AciX9_0803	8.487e-106	364.0	COG0457@1|root,COG0457@2|Bacteria	1198114.AciX9_0803|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4939167_9	478741.JAFS01000002_gene10	6.319e-05	49.0	2DRDY@1|root,33BC0@2|Bacteria	2|Bacteria	S	PFAM Coenzyme PQQ synthesis protein D (PqqD)	-	-	-	-	-	-	-	-	-	-	-	-	PqqD
SRD3_k127_4939167_8	1198114.AciX9_0804	4.018e-23	102.0	COG1493@1|root,COG1493@2|Bacteria,3Y8X6@57723|Acidobacteria,2JNSD@204432|Acidobacteriia	204432|Acidobacteriia	T	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4947835_5	1112216.JH594425_gene2756	1.012e-242	752.0	COG1008@1|root,COG1008@2|Bacteria,1MV7V@1224|Proteobacteria,2TSNK@28211|Alphaproteobacteria,2K0EQ@204457|Sphingomonadales	204457|Sphingomonadales	C	NADH ubiquinone oxidoreductase subunit	nuoM	-	1.6.5.3	ko:K00342	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q5_N,Proton_antipo_M
SRD3_k127_4947835_6	1112212.JH584235_gene459	1.876e-230	724.0	COG1007@1|root,COG1007@2|Bacteria,1MV56@1224|Proteobacteria,2TQMX@28211|Alphaproteobacteria,2K08E@204457|Sphingomonadales	204457|Sphingomonadales	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoN	-	1.6.5.3	ko:K00343	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Proton_antipo_M
SRD3_k127_4947835_18	1112214.AHIS01000101_gene1626	5.516e-100	338.0	COG0340@1|root,COG0340@2|Bacteria,1MWCC@1224|Proteobacteria,2TS82@28211|Alphaproteobacteria,2JZZZ@204457|Sphingomonadales	204457|Sphingomonadales	H	biotin lipoate A B protein ligase	birA	-	6.3.4.15	ko:K03524	ko00780,ko01100,map00780,map01100	-	R01074,R05145	RC00043,RC00070,RC00096,RC02896	ko00000,ko00001,ko01000,ko03000	-	-	-	BPL_C,BPL_LplA_LipB,BPL_LplA_LipB_2
SRD3_k127_4947835_12	1112216.JH594425_gene2759	2.065e-146	466.0	COG1521@1|root,COG1521@2|Bacteria,1MUYA@1224|Proteobacteria,2TS5A@28211|Alphaproteobacteria,2K0SW@204457|Sphingomonadales	204457|Sphingomonadales	F	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis	coaX	-	2.7.1.33	ko:K03525	ko00770,ko01100,map00770,map01100	M00120	R02971,R03018,R04391	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	Pan_kinase
SRD3_k127_4947835_2	1112214.AHIS01000101_gene1624	1.247e-288	900.0	COG0595@1|root,COG0595@2|Bacteria,1MUGV@1224|Proteobacteria,2TQTR@28211|Alphaproteobacteria,2K04C@204457|Sphingomonadales	204457|Sphingomonadales	S	metallo-beta-lactamase	-	-	-	ko:K12574	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	Lactamase_B,Lactamase_B_2,RMMBL
SRD3_k127_4947835_32	1112212.JH584235_gene463	2.834e-37	143.0	COG5454@1|root,COG5454@2|Bacteria,1N8U9@1224|Proteobacteria,2UGCD@28211|Alphaproteobacteria,2K711@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF1467)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1467
SRD3_k127_4947835_21	1112212.JH584235_gene464	1.063e-92	305.0	COG2193@1|root,COG2193@2|Bacteria,1RCW7@1224|Proteobacteria,2U70I@28211|Alphaproteobacteria,2K3XA@204457|Sphingomonadales	204457|Sphingomonadales	P	Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex	bfr	-	1.16.3.1	ko:K03594	ko00860,map00860	-	R00078	RC02758	ko00000,ko00001,ko01000	-	-	-	Ferritin
SRD3_k127_4947835_38	745310.G432_05645	2.814e-19	88.0	COG2906@1|root,COG2906@2|Bacteria,1PBPB@1224|Proteobacteria,2UM95@28211|Alphaproteobacteria,2K6XK@204457|Sphingomonadales	204457|Sphingomonadales	P	BFD-like [2Fe-2S] binding domain	-	-	-	ko:K02192	-	-	-	-	ko00000	-	-	-	Fer2_BFD
SRD3_k127_4947835_14	1449076.JOOE01000002_gene1324	6.697e-135	441.0	COG2311@1|root,COG2311@2|Bacteria,1MWHW@1224|Proteobacteria,2UBZQ@28211|Alphaproteobacteria,2KD2Q@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF418)	-	-	-	ko:K07148	-	-	-	-	ko00000	-	-	-	DUF418
SRD3_k127_4947835_35	1144307.PMI04_02323	4.513e-30	126.0	2E32R@1|root,32Y2Y@2|Bacteria,1N91I@1224|Proteobacteria,2UI6P@28211|Alphaproteobacteria,2K701@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4947835_29	1123269.NX02_29495	3.091e-49	181.0	2DMMQ@1|root,32SHK@2|Bacteria,1N2WS@1224|Proteobacteria,2UC62@28211|Alphaproteobacteria,2K5BZ@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF3052
SRD3_k127_4947835_34	685778.AORL01000021_gene910	4.699e-36	143.0	2E32R@1|root,32Y2Y@2|Bacteria,1N91I@1224|Proteobacteria,2UI6P@28211|Alphaproteobacteria,2K701@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4947835_0	1112214.AHIS01000101_gene1621	0.0	1313.0	COG0046@1|root,COG0046@2|Bacteria,1MYN4@1224|Proteobacteria,2TRGM@28211|Alphaproteobacteria,2K25A@204457|Sphingomonadales	204457|Sphingomonadales	F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL	purL	-	6.3.5.3	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04463	RC00010,RC01160	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRS,AIRS_C
SRD3_k127_4947835_16	1282876.BAOK01000001_gene2281	1.139e-114	377.0	COG3000@1|root,COG3000@2|Bacteria,1R48K@1224|Proteobacteria,2U4WF@28211|Alphaproteobacteria	28211|Alphaproteobacteria	I	COG3000 Sterol desaturase	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
SRD3_k127_4947835_31	1282876.BAOK01000001_gene2282	2.077e-44	169.0	COG0664@1|root,COG0664@2|Bacteria,1MUHT@1224|Proteobacteria,2U1RI@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	Cyclic nucleotide-monophosphate binding domain	MA20_42555	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,cNMP_binding
SRD3_k127_4947835_27	627192.SLG_16250	3.738e-54	192.0	COG1393@1|root,COG1393@2|Bacteria,1MZ4Z@1224|Proteobacteria,2U70U@28211|Alphaproteobacteria,2K5DH@204457|Sphingomonadales	204457|Sphingomonadales	P	arsenate reductase	-	-	1.20.4.1	ko:K00537	-	-	-	-	ko00000,ko01000	-	-	-	ArsC
SRD3_k127_4947835_22	685035.ADAE01000018_gene595	4.303e-70	249.0	arCOG09454@1|root,30G4A@2|Bacteria,1N61J@1224|Proteobacteria,2UEFT@28211|Alphaproteobacteria,2K4KH@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4947835_15	1123269.NX02_17265	1.259e-133	434.0	COG0179@1|root,COG0179@2|Bacteria,1MV0V@1224|Proteobacteria,2TQYU@28211|Alphaproteobacteria,2K2VH@204457|Sphingomonadales	204457|Sphingomonadales	Q	COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)	-	-	3.7.1.2	ko:K16171	ko00350,ko00643,ko01100,ko01120,map00350,map00643,map01100,map01120	M00044	R01364	RC00326,RC00446	ko00000,ko00001,ko00002,ko01000	-	-	-	FAA_hydrolase
SRD3_k127_4947835_19	627192.SLG_14340	6.886e-99	329.0	COG2197@1|root,COG2197@2|Bacteria,1R17I@1224|Proteobacteria,2UJU1@28211|Alphaproteobacteria,2KEP5@204457|Sphingomonadales	28211|Alphaproteobacteria	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE
SRD3_k127_4947835_7	627192.SLG_14310	2.605e-223	715.0	COG1629@1|root,COG4771@2|Bacteria,1MWKN@1224|Proteobacteria,2U3VD@28211|Alphaproteobacteria,2K0FN@204457|Sphingomonadales	204457|Sphingomonadales	P	Protein involved in receptor activity and transport	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SRD3_k127_4947835_11	627192.SLG_14250	1.86e-164	520.0	COG3246@1|root,COG3246@2|Bacteria,1MZTP@1224|Proteobacteria,2TRG7@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	beta-keto acid cleavage enzyme	-	-	2.3.1.247	ko:K18013	ko00310,map00310	-	R10564	RC02728,RC03199	ko00000,ko00001,ko01000	-	-	-	BKACE
SRD3_k127_4947835_8	1112214.AHIS01000101_gene1620	6.84e-203	638.0	COG0477@1|root,COG2814@2|Bacteria,1MWKH@1224|Proteobacteria,2U0GU@28211|Alphaproteobacteria,2K459@204457|Sphingomonadales	204457|Sphingomonadales	EGP	Sugar (and other) transporter	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
SRD3_k127_4947835_40	1550073.JROH01000005_gene1566	1.259e-05	51.0	COG0596@1|root,COG0596@2|Bacteria,1MVVX@1224|Proteobacteria,2TT0S@28211|Alphaproteobacteria,2K14Q@204457|Sphingomonadales	204457|Sphingomonadales	S	Alpha beta hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6
SRD3_k127_4947835_4	1470591.BW41_00195	3.172e-274	845.0	COG0439@1|root,COG0439@2|Bacteria,1MU4H@1224|Proteobacteria,2U25Z@28211|Alphaproteobacteria,2K11Z@204457|Sphingomonadales	204457|Sphingomonadales	I	An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism	accC	-	6.3.4.14,6.4.1.2	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742,R04385	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,CPSase_L_D2
SRD3_k127_4947835_25	1112212.JH584235_gene469	7.468e-60	211.0	COG0511@1|root,COG0511@2|Bacteria,1RCXA@1224|Proteobacteria,2U93Y@28211|Alphaproteobacteria,2K5JX@204457|Sphingomonadales	204457|Sphingomonadales	I	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA	accB	-	-	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742	RC00040,RC00367	ko00000,ko00001,ko00002	-	-	-	Biotin_lipoyl
SRD3_k127_4947835_23	1090320.KB900605_gene502	4.074e-69	237.0	COG0757@1|root,COG0757@2|Bacteria,1RDDT@1224|Proteobacteria,2U9BV@28211|Alphaproteobacteria,2K3VV@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes a trans-dehydration via an enolate intermediate	aroQ	-	4.2.1.10	ko:K03786	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R03084	RC00848	ko00000,ko00001,ko00002,ko01000	-	-	-	DHquinase_II
SRD3_k127_4947835_9	1112212.JH584235_gene471	3.228e-193	605.0	COG2022@1|root,COG2022@2|Bacteria,1N0N5@1224|Proteobacteria,2TSXS@28211|Alphaproteobacteria,2K0MM@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S	thiG	-	2.8.1.10	ko:K03149	ko00730,ko01100,map00730,map01100	-	R10247	RC03096,RC03097,RC03461	ko00000,ko00001,ko01000	-	-	-	ThiG,ThiS
SRD3_k127_4947835_24	1112212.JH584235_gene472	7.249e-66	235.0	COG1073@1|root,COG1073@2|Bacteria,1Q72M@1224|Proteobacteria,2VD6R@28211|Alphaproteobacteria,2K4EI@204457|Sphingomonadales	204457|Sphingomonadales	S	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_4
SRD3_k127_4947835_37	194867.ALBQ01000011_gene34	2.883e-21	95.0	2AHI9@1|root,317VU@2|Bacteria,1NKZ3@1224|Proteobacteria,2UN82@28211|Alphaproteobacteria,2KCB0@204457|Sphingomonadales	204457|Sphingomonadales	S	CsbD-like	-	-	-	-	-	-	-	-	-	-	-	-	CsbD
SRD3_k127_4947835_1	1112212.JH584235_gene475	2.357e-299	923.0	COG0028@1|root,COG0028@2|Bacteria,1MU6U@1224|Proteobacteria,2TSB1@28211|Alphaproteobacteria,2K0EY@204457|Sphingomonadales	204457|Sphingomonadales	EH	Belongs to the TPP enzyme family	-	-	2.2.1.6	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R00006,R00014,R00226,R03050,R04672,R04673,R08648	RC00027,RC00106,RC01192,RC02744,RC02893	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
SRD3_k127_4947835_36	266835.14027544	1.185e-29	123.0	COG2329@1|root,COG2329@2|Bacteria	2|Bacteria	S	heme oxygenase (decyclizing) activity	tcmH	-	-	-	-	-	-	-	-	-	-	-	ABM,DUF4937
SRD3_k127_4947835_26	1112216.JH594425_gene3192	4.793e-58	202.0	COG0278@1|root,COG0278@2|Bacteria,1MZ4V@1224|Proteobacteria,2U9QB@28211|Alphaproteobacteria,2K55Y@204457|Sphingomonadales	204457|Sphingomonadales	O	Belongs to the glutaredoxin family. Monothiol subfamily	grxD	-	-	ko:K07390	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	Glutaredoxin
SRD3_k127_4947835_33	1449076.JOOE01000002_gene1293	1.9e-36	138.0	COG0271@1|root,COG0271@2|Bacteria,1R3MM@1224|Proteobacteria,2UBUW@28211|Alphaproteobacteria,2K5YQ@204457|Sphingomonadales	204457|Sphingomonadales	T	Belongs to the BolA IbaG family	-	-	-	-	-	-	-	-	-	-	-	-	BolA
SRD3_k127_4947835_30	1112214.AHIS01000101_gene1610	1.337e-46	171.0	COG5467@1|root,COG5467@2|Bacteria,1MZRN@1224|Proteobacteria,2UC1G@28211|Alphaproteobacteria,2K533@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF1476)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1476
SRD3_k127_4947835_10	1112212.JH584235_gene480	1.672e-189	594.0	COG0604@1|root,COG0604@2|Bacteria,1MWRK@1224|Proteobacteria,2TQMF@28211|Alphaproteobacteria,2K1HA@204457|Sphingomonadales	204457|Sphingomonadales	C	COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases	-	-	1.6.5.5	ko:K00344	-	-	-	-	ko00000,ko01000	-	-	-	ADH_N,ADH_zinc_N
SRD3_k127_4947835_17	1219049.SP5_076_00230	2.542e-100	332.0	COG0066@1|root,COG0066@2|Bacteria,1MVXB@1224|Proteobacteria,2TRRS@28211|Alphaproteobacteria,2JZWQ@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate	leuD	-	4.2.1.33,4.2.1.35	ko:K01704	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	M00432,M00535	R03896,R03898,R03968,R04001,R10170	RC00976,RC00977,RC01041,RC01046,RC03072	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Aconitase_C
SRD3_k127_4947835_3	1549858.MC45_10610	7.445e-281	866.0	COG0065@1|root,COG0065@2|Bacteria,1MVYR@1224|Proteobacteria,2TR6K@28211|Alphaproteobacteria,2K0IM@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate	leuC	-	4.2.1.33,4.2.1.35	ko:K01703	ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230	M00432,M00535	R03896,R03898,R03968,R04001,R08620,R08624,R08628,R08634,R08641,R08645,R10170	RC00497,RC00976,RC00977,RC01041,RC01046,RC03072	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Aconitase
SRD3_k127_4947835_13	573065.Astex_2534	1.181e-144	467.0	COG1816@1|root,COG1816@2|Bacteria,1MWBV@1224|Proteobacteria,2TSBX@28211|Alphaproteobacteria,2KF9N@204458|Caulobacterales	204458|Caulobacterales	F	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism	add	-	3.5.4.2	ko:K21053	ko00230,ko01100,map00230,map01100	-	R01244	RC00477	ko00000,ko00001,ko01000	-	-	-	A_deaminase
SRD3_k127_4947835_39	68570.DC74_6657	2.374e-16	86.0	COG2236@1|root,COG2236@2|Bacteria,2IQSK@201174|Actinobacteria	201174|Actinobacteria	F	Phosphoribosyl transferase domain	-	-	-	ko:K07101	-	-	-	-	ko00000	-	-	-	Pribosyltran
SRD3_k127_4947835_20	69395.JQLZ01000012_gene4276	4.748e-98	329.0	COG1957@1|root,COG1957@2|Bacteria,1MUIW@1224|Proteobacteria,2TTW7@28211|Alphaproteobacteria,2KI95@204458|Caulobacterales	204458|Caulobacterales	F	nucleoside hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	IU_nuc_hydro
SRD3_k127_4970489_22	1157708.KB907450_gene5220	2.065e-74	253.0	COG2818@1|root,COG2818@2|Bacteria,1R9X5@1224|Proteobacteria,2VQC5@28216|Betaproteobacteria,4ACVJ@80864|Comamonadaceae	28216|Betaproteobacteria	L	PFAM Methyladenine glycosylase	tag	-	3.2.2.20	ko:K01246	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Adenine_glyco
SRD3_k127_4970489_17	745310.G432_04320	1.301e-92	321.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,2TQR7@28211|Alphaproteobacteria,2K1AE@204457|Sphingomonadales	204457|Sphingomonadales	NT	chemotaxis	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	MCPsignal
SRD3_k127_4970489_23	1112214.AHIS01000086_gene397	3.454e-73	248.0	COG0335@1|root,COG0335@2|Bacteria,1RH3A@1224|Proteobacteria,2U9DF@28211|Alphaproteobacteria,2K4GC@204457|Sphingomonadales	204457|Sphingomonadales	J	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site	rplS	-	-	ko:K02884	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L19
SRD3_k127_4970489_11	1112216.JH594425_gene3275	1.506e-135	439.0	COG0336@1|root,COG0336@2|Bacteria,1MUN1@1224|Proteobacteria,2TSIZ@28211|Alphaproteobacteria,2JZVZ@204457|Sphingomonadales	204457|Sphingomonadales	J	Belongs to the RNA methyltransferase TrmD family	trmD	-	2.1.1.228	ko:K00554	-	-	R00597	RC00003,RC00334	ko00000,ko01000,ko03016	-	-	-	tRNA_m1G_MT
SRD3_k127_4970489_9	1112216.JH594425_gene3277	2.453e-154	494.0	COG0492@1|root,COG0492@2|Bacteria,1MVWS@1224|Proteobacteria,2TU6F@28211|Alphaproteobacteria,2K1CC@204457|Sphingomonadales	204457|Sphingomonadales	O	Thioredoxin reductase	-	-	1.8.1.9	ko:K00384	ko00450,map00450	-	R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2,Pyr_redox_3
SRD3_k127_4970489_21	1112212.JH584235_gene652	1.693e-78	266.0	COG0806@1|root,COG0806@2|Bacteria,1MWQR@1224|Proteobacteria,2U9UT@28211|Alphaproteobacteria,2K4H2@204457|Sphingomonadales	204457|Sphingomonadales	J	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes	rimM	-	-	ko:K02860	-	-	-	-	ko00000,ko03009	-	-	-	PRC,RimM
SRD3_k127_4970489_24	1112212.JH584235_gene653	1.521e-68	237.0	COG0228@1|root,COG0228@2|Bacteria,1MZCT@1224|Proteobacteria,2U94X@28211|Alphaproteobacteria,2K4I6@204457|Sphingomonadales	204457|Sphingomonadales	J	Belongs to the bacterial ribosomal protein bS16 family	rpsP	-	-	ko:K02959	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	-	-	-	Ribosomal_S16
SRD3_k127_4970489_2	1112216.JH594425_gene3280	1.354e-250	783.0	COG0541@1|root,COG0541@2|Bacteria,1MVIA@1224|Proteobacteria,2TQSW@28211|Alphaproteobacteria,2K1DQ@204457|Sphingomonadales	204457|Sphingomonadales	U	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components	ffh	-	3.6.5.4	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko01000,ko02044	3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9	-	-	SRP54,SRP54_N,SRP_SPB
SRD3_k127_4970489_1	1112212.JH584235_gene655	1.284e-278	864.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,2KCM1@204457|Sphingomonadales	204457|Sphingomonadales	T	Putative diguanylate phosphodiesterase	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF
SRD3_k127_4970489_4	1112214.AHIS01000086_gene389	1.538e-202	637.0	COG0621@1|root,COG0621@2|Bacteria,1MUCS@1224|Proteobacteria,2TRYD@28211|Alphaproteobacteria,2K0WZ@204457|Sphingomonadales	204457|Sphingomonadales	J	2-methylthioadenine	-	-	2.8.4.5	ko:K18707	-	-	R10649	RC00003,RC03221	ko00000,ko01000,ko03016	-	-	-	Radical_SAM,UPF0004
SRD3_k127_4970489_6	1007104.SUS17_988	2.587e-175	554.0	COG0552@1|root,COG0552@2|Bacteria,1MUDU@1224|Proteobacteria,2TS0M@28211|Alphaproteobacteria,2K03J@204457|Sphingomonadales	204457|Sphingomonadales	U	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components	ftsY	-	-	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2,3.A.5.7	-	-	SRP54,SRP54_N
SRD3_k127_4970489_18	1112212.JH584235_gene658	2.445e-91	306.0	COG2917@1|root,COG2917@2|Bacteria,1NWIZ@1224|Proteobacteria,2U74X@28211|Alphaproteobacteria,2K4N8@204457|Sphingomonadales	204457|Sphingomonadales	D	probably involved in intracellular septation	ispZ	-	-	ko:K06190	-	-	-	-	ko00000	-	-	-	IspA
SRD3_k127_4970489_15	1449076.JOOE01000002_gene899	4.547e-106	347.0	COG0605@1|root,COG0605@2|Bacteria,1MVW2@1224|Proteobacteria,2TU3T@28211|Alphaproteobacteria,2K112@204457|Sphingomonadales	204457|Sphingomonadales	P	Destroys radicals which are normally produced within the cells and which are toxic to biological systems	-	-	1.15.1.1	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	-	-	-	ko00000,ko00001,ko01000	-	-	-	Sod_Fe_C,Sod_Fe_N
SRD3_k127_4970489_19	1449076.JOOE01000002_gene900	7.693e-90	299.0	COG3748@1|root,COG3748@2|Bacteria,1RFIZ@1224|Proteobacteria,2U7B1@28211|Alphaproteobacteria,2K410@204457|Sphingomonadales	204457|Sphingomonadales	S	Urate oxidase N-terminal	-	-	-	-	-	-	-	-	-	-	-	-	Urate_ox_N
SRD3_k127_4970489_5	1112212.JH584235_gene660	2.74e-176	557.0	COG3829@1|root,COG3829@2|Bacteria,1QUPP@1224|Proteobacteria,2TR58@28211|Alphaproteobacteria,2K0CK@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain	pspF	-	-	ko:K03974	-	-	-	-	ko00000,ko03000	-	-	-	HTH_8,Sigma54_activat
SRD3_k127_4970489_14	1112214.AHIS01000086_gene383	1.232e-107	356.0	COG1842@1|root,COG1842@2|Bacteria,1NC7S@1224|Proteobacteria,2U6CN@28211|Alphaproteobacteria,2K2DP@204457|Sphingomonadales	204457|Sphingomonadales	KT	Phage shock protein A	pspA	-	-	ko:K03969	-	-	-	-	ko00000	-	-	-	PspA_IM30
SRD3_k127_4970489_31	13689.BV96_02219	1.107e-36	140.0	2EH78@1|root,33AZ2@2|Bacteria,1N7AP@1224|Proteobacteria,2UGJI@28211|Alphaproteobacteria,2K6SQ@204457|Sphingomonadales	204457|Sphingomonadales	S	Phage shock protein B	pspB	-	-	ko:K03970	-	-	-	-	ko00000,ko02048	-	-	-	PspB
SRD3_k127_4970489_27	1550073.JROH01000011_gene2071	4.722e-62	218.0	COG1983@1|root,COG1983@2|Bacteria,1RHXA@1224|Proteobacteria,2UA9Z@28211|Alphaproteobacteria,2K54F@204457|Sphingomonadales	204457|Sphingomonadales	KT	PspC domain	pspC	-	-	ko:K03973	-	-	-	-	ko00000,ko02048,ko03000	-	-	-	PspC
SRD3_k127_4970489_36	1331060.RLDS_15080	7.7e-29	120.0	28X1J@1|root,2ZJ09@2|Bacteria,1N9NE@1224|Proteobacteria,2UHAN@28211|Alphaproteobacteria,2K696@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4970489_37	1549858.MC45_06375	5.645e-24	106.0	28X1J@1|root,2ZJ09@2|Bacteria,1N9NE@1224|Proteobacteria,2UHAN@28211|Alphaproteobacteria,2K696@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4970489_32	1123269.NX02_13210	5.882e-33	132.0	28X1J@1|root,344AU@2|Bacteria,1N404@1224|Proteobacteria,2UC94@28211|Alphaproteobacteria,2K65T@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4970489_34	1112216.JH594425_gene3292	1.235e-30	123.0	2DNTE@1|root,32Z25@2|Bacteria,1NQ2N@1224|Proteobacteria,2UM3U@28211|Alphaproteobacteria,2K6S0@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4970489_33	1112212.JH584235_gene670	7.512e-33	131.0	2DNTE@1|root,32Z25@2|Bacteria,1NK1C@1224|Proteobacteria,2UJRY@28211|Alphaproteobacteria,2K7CU@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4970489_35	1112214.AHIS01000086_gene376	1.092e-29	121.0	29B0T@1|root,2ZXZQ@2|Bacteria,1ND25@1224|Proteobacteria,2UJ2J@28211|Alphaproteobacteria,2K6SU@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4970489_26	13690.CP98_02274	2.066e-65	228.0	COG2166@1|root,COG2166@2|Bacteria,1RI8F@1224|Proteobacteria,2U9A2@28211|Alphaproteobacteria,2K4H9@204457|Sphingomonadales	204457|Sphingomonadales	S	SufE protein probably involved in Fe-S center assembly	sufE	-	-	ko:K02426	-	-	-	-	ko00000	-	-	-	SufE
SRD3_k127_4970489_20	395963.Bind_2266	1.694e-89	310.0	COG0666@1|root,COG0666@2|Bacteria,1MZSX@1224|Proteobacteria,2UC99@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	response to abiotic stimulus	-	-	-	-	-	-	-	-	-	-	-	-	Ank
SRD3_k127_4970489_8	1174684.EBMC1_10935	1.101e-169	546.0	COG0520@1|root,COG0520@2|Bacteria,1MXH1@1224|Proteobacteria,2TQUT@28211|Alphaproteobacteria,2K25H@204457|Sphingomonadales	204457|Sphingomonadales	E	Selenocysteine lyase	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_5
SRD3_k127_4970489_30	1449076.JOOE01000002_gene913	1.091e-40	153.0	COG5469@1|root,COG5469@2|Bacteria,1NH70@1224|Proteobacteria,2UMWA@28211|Alphaproteobacteria,2K6DQ@204457|Sphingomonadales	204457|Sphingomonadales	S	metal-binding protein	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4970489_16	1112216.JH594425_gene3299	2.699e-99	326.0	COG2214@1|root,COG2214@2|Bacteria,1RHBK@1224|Proteobacteria,2TYF4@28211|Alphaproteobacteria,2KEMB@204457|Sphingomonadales	204457|Sphingomonadales	O	DnaJ molecular chaperone homology domain	-	-	-	-	-	-	-	-	-	-	-	-	DnaJ
SRD3_k127_4970489_7	1379701.JPJC01000063_gene1411	1.114e-172	566.0	2BSTR@1|root,32MX7@2|Bacteria,1NTMJ@1224|Proteobacteria,2UPVD@28211|Alphaproteobacteria,2K1X5@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	ko:K20543	-	-	-	-	ko00000,ko02000	1.B.55.3	-	-	TonB_C
SRD3_k127_4970489_38	1150626.PHAMO_10077	2.884e-20	92.0	2DI18@1|root,301P8@2|Bacteria,1PTHJ@1224|Proteobacteria,2V5D3@28211|Alphaproteobacteria,2JYAW@204441|Rhodospirillales	204441|Rhodospirillales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_4970489_3	745310.G432_15145	5.484e-237	752.0	COG1506@1|root,COG1506@2|Bacteria,1MUJ3@1224|Proteobacteria,2TUZZ@28211|Alphaproteobacteria,2JZXS@204457|Sphingomonadales	204457|Sphingomonadales	E	COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S9
SRD3_k127_4970489_12	1112212.JH584235_gene678	3.029e-131	421.0	COG3023@1|root,COG3023@2|Bacteria,1RDHU@1224|Proteobacteria,2TSW3@28211|Alphaproteobacteria,2K0W6@204457|Sphingomonadales	204457|Sphingomonadales	V	N-acetylmuramoyl-L-alanine amidase	-	-	3.5.1.28	ko:K01447	-	-	R04112	RC00064,RC00141	ko00000,ko01000	-	-	-	Amidase_2
SRD3_k127_4970489_13	1112216.JH594425_gene3301	6.235e-115	381.0	COG1352@1|root,COG1352@2|Bacteria,1MU6W@1224|Proteobacteria,2TRQ3@28211|Alphaproteobacteria,2K3X1@204457|Sphingomonadales	204457|Sphingomonadales	NT	COG1352 Methylase of chemotaxis methyl-accepting proteins	cheR	-	2.1.1.80	ko:K00575	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko01000,ko02035	-	-	-	CheR
SRD3_k127_4970489_10	1112216.JH594425_gene3302	3.599e-136	444.0	COG2201@1|root,COG2201@2|Bacteria,1MWCN@1224|Proteobacteria,2TSGV@28211|Alphaproteobacteria,2K0GS@204457|Sphingomonadales	204457|Sphingomonadales	NT	catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR	cheB	-	3.1.1.61,3.5.1.44	ko:K03412	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	CheB_methylest,Response_reg
SRD3_k127_4970489_25	1112214.AHIS01000086_gene368	4.705e-68	231.0	COG0745@1|root,COG0745@2|Bacteria,1QU38@1224|Proteobacteria,2TVXD@28211|Alphaproteobacteria,2KEGQ@204457|Sphingomonadales	204457|Sphingomonadales	T	cheY-homologous receiver domain	-	-	-	ko:K03413	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko02022,ko02035	-	-	-	Response_reg
SRD3_k127_4970489_28	1112216.JH594425_gene3304	1.903e-52	200.0	COG0835@1|root,COG0835@2|Bacteria,1N88R@1224|Proteobacteria,2UGI7@28211|Alphaproteobacteria,2K55G@204457|Sphingomonadales	204457|Sphingomonadales	NT	Two component signalling adaptor domain	-	-	-	ko:K03408	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	CheW
SRD3_k127_4970489_0	1112212.JH584235_gene683	0.0	1103.0	COG0643@1|root,COG0643@2|Bacteria,1MUAG@1224|Proteobacteria,2TSN2@28211|Alphaproteobacteria,2K0Z1@204457|Sphingomonadales	204457|Sphingomonadales	NT	chemotaxis protein	cheA	-	2.7.13.3	ko:K03407	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035	-	-	-	CheW,H-kinase_dim,HATPase_c,Hpt
SRD3_k127_4970489_29	1112214.AHIS01000086_gene365	7.591e-41	152.0	COG5385@1|root,COG5385@2|Bacteria,1MVEY@1224|Proteobacteria,2TSE6@28211|Alphaproteobacteria,2K0H0@204457|Sphingomonadales	204457|Sphingomonadales	S	Histidine phosphotransferase C-terminal domain	-	-	-	ko:K13588	ko02020,ko04112,map02020,map04112	-	-	-	ko00000,ko00001	-	-	-	HPTransfase
SRD3_k127_5105400_4	1112214.AHIS01000047_gene2159	2.563e-80	272.0	COG0500@1|root,COG2226@2|Bacteria,1REUM@1224|Proteobacteria,2U75Q@28211|Alphaproteobacteria,2K51Q@204457|Sphingomonadales	204457|Sphingomonadales	Q	ubiE/COQ5 methyltransferase family	-	-	-	ko:K13623	ko00564,map00564	-	R09073	RC00003,RC02308	ko00000,ko00001	-	-	-	Methyltransf_23,Methyltransf_25
SRD3_k127_5105400_0	1112212.JH584235_gene2638	4.081e-235	732.0	COG5379@1|root,COG5379@2|Bacteria,1MWG8@1224|Proteobacteria,2TQKH@28211|Alphaproteobacteria,2K195@204457|Sphingomonadales	204457|Sphingomonadales	I	S-adenosylmethionine diacylglycerol 3-amino-3-carboxypropyl transferase	-	-	-	ko:K13622	ko00564,map00564	-	R09072	RC00021,RC01091	ko00000,ko00001	-	-	-	DUF3419
SRD3_k127_5105400_3	1112214.AHIS01000047_gene2161	1.241e-80	276.0	COG2335@1|root,COG2335@2|Bacteria,1RD06@1224|Proteobacteria,2U7H5@28211|Alphaproteobacteria,2K4RQ@204457|Sphingomonadales	204457|Sphingomonadales	M	COG2335 Secreted and surface protein containing fasciclin-like repeats	-	-	-	-	-	-	-	-	-	-	-	-	Fasciclin
SRD3_k127_5105400_5	1112212.JH584235_gene2640	1.234e-74	258.0	COG5343@1|root,COG5343@2|Bacteria,1N821@1224|Proteobacteria,2UF3V@28211|Alphaproteobacteria,2K4R7@204457|Sphingomonadales	204457|Sphingomonadales	S	Anti-sigma-K factor rskA	-	-	-	-	-	-	-	-	-	-	-	-	RskA
SRD3_k127_5105400_2	1112212.JH584235_gene2641	4.465e-96	319.0	COG1595@1|root,COG1595@2|Bacteria,1N00E@1224|Proteobacteria,2U6J3@28211|Alphaproteobacteria,2K57J@204457|Sphingomonadales	204457|Sphingomonadales	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4,Sigma70_r4_2
SRD3_k127_5105400_7	69395.JQLZ01000006_gene2232	1.702e-68	244.0	2E2V3@1|root,32XWV@2|Bacteria,1MZBD@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5105400_8	194867.ALBQ01000021_gene2067	5.161e-58	212.0	COG3279@1|root,COG3279@2|Bacteria,1N903@1224|Proteobacteria,2U7W7@28211|Alphaproteobacteria,2KDA5@204457|Sphingomonadales	204457|Sphingomonadales	KT	LytTr DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	LytTR
SRD3_k127_5105400_6	1112214.AHIS01000047_gene2164	3.059e-71	244.0	COG0698@1|root,COG0698@2|Bacteria,1RHBF@1224|Proteobacteria,2U94R@28211|Alphaproteobacteria,2K4KN@204457|Sphingomonadales	204457|Sphingomonadales	G	Ribose 5-phosphate isomerase	rpiB	-	5.3.1.6	ko:K01808	ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01056,R09030	RC00376,RC00434	ko00000,ko00001,ko00002,ko01000	-	-	-	LacAB_rpiB
SRD3_k127_5105400_1	1112214.AHIS01000047_gene2165	5.719e-188	592.0	COG0112@1|root,COG0112@2|Bacteria,1MUIS@1224|Proteobacteria,2TQKT@28211|Alphaproteobacteria,2K0BB@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism	glyA	-	2.1.2.1	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	M00140,M00141,M00346,M00532	R00945,R09099	RC00022,RC00112,RC01583,RC02958	ko00000,ko00001,ko00002,ko01000	-	-	-	SHMT
SRD3_k127_5134588_1	1090320.KB900605_gene2299	1.451e-115	377.0	COG1974@1|root,COG1974@2|Bacteria,1MW80@1224|Proteobacteria,2TT7W@28211|Alphaproteobacteria,2K1AX@204457|Sphingomonadales	204457|Sphingomonadales	K	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	lexA	-	3.4.21.88	ko:K01356	-	M00729	-	-	ko00000,ko00002,ko01000,ko01002,ko03400	-	-	-	LexA_DNA_bind,Peptidase_S24
SRD3_k127_5134588_2	926566.Terro_4208	3.897e-36	149.0	COG3751@1|root,COG3751@2|Bacteria	2|Bacteria	O	2OG-Fe(II) oxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	2OG-FeII_Oxy_3
SRD3_k127_5134588_0	1112212.JH584235_gene3641	2.952e-317	987.0	COG0658@1|root,COG0658@2|Bacteria,1MUKF@1224|Proteobacteria,2TRD5@28211|Alphaproteobacteria,2K0XJ@204457|Sphingomonadales	204457|Sphingomonadales	S	membrane metal-binding protein	-	-	-	ko:K02238	-	M00429	-	-	ko00000,ko00002,ko02044	3.A.11.1,3.A.11.2	-	-	Competence,DUF4131
SRD3_k127_5135073_10	1112212.JH584235_gene1344	2.368e-76	258.0	COG0726@1|root,COG0726@2|Bacteria,1REXP@1224|Proteobacteria,2VG76@28211|Alphaproteobacteria,2KE1W@204457|Sphingomonadales	204457|Sphingomonadales	G	PFAM Polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
SRD3_k127_5135073_2	1090320.KB900605_gene1514	5e-324	1016.0	COG0457@1|root,COG1305@1|root,COG0457@2|Bacteria,COG1305@2|Bacteria,1R5Q7@1224|Proteobacteria,2U24E@28211|Alphaproteobacteria,2K21Z@204457|Sphingomonadales	204457|Sphingomonadales	E	Domain of Unknown Function with PDB structure (DUF3857)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3857,TPR_16,Transglut_core
SRD3_k127_5135073_0	1112212.JH584235_gene818	0.0	1168.0	COG0322@1|root,COG0322@2|Bacteria,1MV38@1224|Proteobacteria,2TT32@28211|Alphaproteobacteria,2K1TK@204457|Sphingomonadales	204457|Sphingomonadales	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision	uvrC	-	-	ko:K03703	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	GIY-YIG,HHH_5,UVR,UvrC_HhH_N
SRD3_k127_5135073_9	279238.Saro_1811	4.705e-83	283.0	COG3967@1|root,COG3967@2|Bacteria,1QSYJ@1224|Proteobacteria,2UBZS@28211|Alphaproteobacteria,2K48U@204457|Sphingomonadales	204457|Sphingomonadales	M	Enoyl-(Acyl carrier protein) reductase	-	-	-	ko:K14189	-	-	-	-	ko00000,ko01000	-	-	-	adh_short
SRD3_k127_5135073_14	1449076.JOOE01000003_gene3535	1.224e-26	114.0	2EK15@1|root,33DRN@2|Bacteria,1N74W@1224|Proteobacteria,2UFQQ@28211|Alphaproteobacteria,2K6RJ@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5135073_11	1112214.AHIS01000086_gene413	1.325e-65	231.0	COG0711@1|root,COG0711@2|Bacteria,1N0P5@1224|Proteobacteria,2U5DD@28211|Alphaproteobacteria,2K57Z@204457|Sphingomonadales	204457|Sphingomonadales	C	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)	atpF_2	-	-	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt_B
SRD3_k127_5135073_12	1112214.AHIS01000086_gene412	1.071e-59	210.0	COG0711@1|root,COG0711@2|Bacteria,1MZGU@1224|Proteobacteria,2UBVW@28211|Alphaproteobacteria,2K5D0@204457|Sphingomonadales	204457|Sphingomonadales	C	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)	atpF_1	-	-	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt_B
SRD3_k127_5135073_13	1112212.JH584235_gene822	7.673e-33	128.0	COG0636@1|root,COG0636@2|Bacteria,1MZBU@1224|Proteobacteria,2UFPN@28211|Alphaproteobacteria,2K61N@204457|Sphingomonadales	204457|Sphingomonadales	C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation	atpE	-	-	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt_C
SRD3_k127_5135073_6	1112212.JH584235_gene823	6.453e-134	432.0	COG0356@1|root,COG0356@2|Bacteria,1MV87@1224|Proteobacteria,2TRNV@28211|Alphaproteobacteria,2K17B@204457|Sphingomonadales	204457|Sphingomonadales	C	it plays a direct role in the translocation of protons across the membrane	atpB	-	-	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko03110	3.A.2.1	-	-	ATP-synt_A
SRD3_k127_5135073_15	1112212.JH584235_gene824	4.144e-26	113.0	COG5336@1|root,COG5336@2|Bacteria,1N2ME@1224|Proteobacteria,2UCBR@28211|Alphaproteobacteria,2K62W@204457|Sphingomonadales	204457|Sphingomonadales	S	function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex	atpI	-	-	ko:K02116	-	-	-	-	ko00000,ko00194	3.A.2.1	-	-	ATPase_gene1
SRD3_k127_5135073_16	1280944.HY17_04635	8.663e-23	104.0	COG2963@1|root,COG2963@2|Bacteria,1N24I@1224|Proteobacteria,2UGNR@28211|Alphaproteobacteria	28211|Alphaproteobacteria	L	transposase activity	-	-	-	-	-	-	-	-	-	-	-	-	HTH_23
SRD3_k127_5135073_7	1122612.AUBA01000004_gene493	1.452e-101	338.0	COG2207@1|root,COG2207@2|Bacteria,1RKX7@1224|Proteobacteria,2UB2T@28211|Alphaproteobacteria,2K4KU@204457|Sphingomonadales	204457|Sphingomonadales	K	Helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
SRD3_k127_5135073_5	1429851.X548_20255	1.686e-193	623.0	COG1752@1|root,COG1752@2|Bacteria,1N9HS@1224|Proteobacteria,1SJQK@1236|Gammaproteobacteria,1X9SY@135614|Xanthomonadales	135614|Xanthomonadales	S	Patatin-like phospholipase	-	-	-	-	-	-	-	-	-	-	-	-	Patatin
SRD3_k127_5135073_8	745310.G432_13130	2.722e-85	294.0	COG5473@1|root,COG5473@2|Bacteria,1MVRU@1224|Proteobacteria,2TRUD@28211|Alphaproteobacteria,2K414@204457|Sphingomonadales	204457|Sphingomonadales	S	Predicted integral membrane protein (DUF2189)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2189
SRD3_k127_5135073_1	1112214.AHIS01000056_gene2907	0.0	1041.0	COG4773@1|root,COG4773@2|Bacteria,1QWUE@1224|Proteobacteria,2UP1W@28211|Alphaproteobacteria,2K3PE@204457|Sphingomonadales	204457|Sphingomonadales	P	TonB-dependent Receptor Plug Domain	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SRD3_k127_5135073_3	1112214.AHIS01000056_gene2906	2.666e-258	805.0	COG0318@1|root,COG0318@2|Bacteria,1MUMC@1224|Proteobacteria,2TR96@28211|Alphaproteobacteria,2K0TE@204457|Sphingomonadales	204457|Sphingomonadales	IQ	COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II	-	-	6.2.1.44	ko:K20034	ko00920,map00920	-	R10820	RC00004,RC00014	ko00000,ko00001,ko01000	-	-	-	AMP-binding,AMP-binding_C
SRD3_k127_5135073_4	1112212.JH584235_gene2129	6.331e-244	757.0	COG2272@1|root,COG2272@2|Bacteria,1MVQZ@1224|Proteobacteria,2TUA9@28211|Alphaproteobacteria,2K1A5@204457|Sphingomonadales	204457|Sphingomonadales	I	Belongs to the type-B carboxylesterase lipase family	-	-	-	ko:K03929	-	-	-	-	ko00000,ko01000	-	CE10	-	COesterase,PBP
SRD3_k127_5140162_4	1470591.BW41_03704	1.211e-78	263.0	COG0492@1|root,COG0492@2|Bacteria,1MV15@1224|Proteobacteria,2TRBW@28211|Alphaproteobacteria,2K0I2@204457|Sphingomonadales	204457|Sphingomonadales	C	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family	trxB	-	1.8.1.9	ko:K00384	ko00450,map00450	-	R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2
SRD3_k127_5140162_3	1550073.JROH01000064_gene2848	3.898e-147	473.0	COG0627@1|root,COG0627@2|Bacteria,1MUID@1224|Proteobacteria,2TQSM@28211|Alphaproteobacteria,2K143@204457|Sphingomonadales	204457|Sphingomonadales	S	Serine hydrolase involved in the detoxification of formaldehyde	fghA	-	3.1.2.12	ko:K01070	ko00680,ko01120,ko01200,map00680,map01120,map01200	-	R00527	RC00167,RC00320	ko00000,ko00001,ko01000	-	CE1	-	Esterase
SRD3_k127_5140162_8	1280947.HY30_14410	1.228e-62	218.0	COG0346@1|root,COG0346@2|Bacteria,1RH8G@1224|Proteobacteria,2U9BR@28211|Alphaproteobacteria,43XZS@69657|Hyphomonadaceae	28211|Alphaproteobacteria	E	COG0346 Lactoylglutathione lyase and related lyases	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
SRD3_k127_5140162_1	1112212.JH584235_gene3742	6.753e-238	738.0	COG1062@1|root,COG1062@2|Bacteria,1MUK4@1224|Proteobacteria,2TT67@28211|Alphaproteobacteria,2K04T@204457|Sphingomonadales	204457|Sphingomonadales	C	Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily	-	-	1.1.1.1,1.1.1.284	ko:K00121	ko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204	-	R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R06983,R07105,R08281,R08306,R08310	RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01715,RC01734,RC02273	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_zinc_N
SRD3_k127_5140162_5	1112214.AHIS01000083_gene3613	2.809e-76	265.0	COG1514@1|root,COG1514@2|Bacteria,1RIHA@1224|Proteobacteria,2UAUZ@28211|Alphaproteobacteria,2K46A@204457|Sphingomonadales	204457|Sphingomonadales	J	2'-5' RNA ligase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	2_5_RNA_ligase2
SRD3_k127_5140162_0	1112214.AHIS01000083_gene3612	0.0	1058.0	COG3158@1|root,COG3158@2|Bacteria,1MUVH@1224|Proteobacteria,2TRVJ@28211|Alphaproteobacteria,2JZUZ@204457|Sphingomonadales	204457|Sphingomonadales	P	Transport of potassium into the cell	kup	-	-	ko:K03549	-	-	-	-	ko00000,ko02000	2.A.72	-	-	K_trans
SRD3_k127_5140162_6	1112214.AHIS01000083_gene3611	3.235e-69	253.0	COG1522@1|root,COG1522@2|Bacteria,1RI7R@1224|Proteobacteria,2U9CC@28211|Alphaproteobacteria,2K4AA@204457|Sphingomonadales	204457|Sphingomonadales	K	helix_turn_helix ASNC type	-	-	-	-	-	-	-	-	-	-	-	-	AsnC_trans_reg,HTH_24,HTH_AsnC-type
SRD3_k127_5140162_2	1112214.AHIS01000083_gene3610	1.793e-211	671.0	COG0686@1|root,COG0686@2|Bacteria,1QTX1@1224|Proteobacteria,2TQQC@28211|Alphaproteobacteria,2K0C2@204457|Sphingomonadales	204457|Sphingomonadales	C	Belongs to the AlaDH PNT family	ald	-	1.4.1.1	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	-	R00396	RC00008	ko00000,ko00001,ko01000	-	-	-	AlaDh_PNT_C,AlaDh_PNT_N
SRD3_k127_5140162_7	1112214.AHIS01000095_gene766	8.285e-67	235.0	COG4235@1|root,COG4235@2|Bacteria,1RB0I@1224|Proteobacteria,2U69S@28211|Alphaproteobacteria,2K4DU@204457|Sphingomonadales	204457|Sphingomonadales	O	Cytochrome c biogenesis factor	-	-	-	ko:K02200	-	-	-	-	ko00000	-	-	-	TPR_14,TPR_16,TPR_19
SRD3_k127_5140162_9	1112214.AHIS01000046_gene2274	6.813e-28	113.0	COG3088@1|root,COG3088@2|Bacteria,1MZZ5@1224|Proteobacteria,2U96P@28211|Alphaproteobacteria,2K57D@204457|Sphingomonadales	204457|Sphingomonadales	O	subunit of a heme lyase	-	-	-	ko:K02200	-	-	-	-	ko00000	-	-	-	CcmH
SRD3_k127_5185099_4	1112212.JH584235_gene1965	3.251e-77	261.0	COG2227@1|root,COG2227@2|Bacteria,1MU89@1224|Proteobacteria,2TRIK@28211|Alphaproteobacteria,2K0DH@204457|Sphingomonadales	204457|Sphingomonadales	H	O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway	ubiG	-	2.1.1.222,2.1.1.64	ko:K00568	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00117	R04988,R05614,R08769,R08781	RC00003,RC00392,RC01895	ko00000,ko00001,ko00002,ko01000	-	-	-	Methyltransf_11,Methyltransf_23
SRD3_k127_5185099_8	1550073.JROH01000004_gene2324	0.0002743	47.0	COG0512@1|root,COG0512@2|Bacteria,1MV5Y@1224|Proteobacteria,2TU3N@28211|Alphaproteobacteria,2K28N@204457|Sphingomonadales	204457|Sphingomonadales	EH	with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis	trpG	-	4.1.3.27	ko:K01658	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	M00023	R00985,R00986	RC00010,RC02148,RC02414	ko00000,ko00001,ko00002,ko01000	-	-	-	GATase
SRD3_k127_5185099_0	1112214.AHIS01000043_gene1849	4.235e-231	724.0	COG1174@1|root,COG1732@1|root,COG1174@2|Bacteria,COG1732@2|Bacteria,1MXA1@1224|Proteobacteria,2TUNH@28211|Alphaproteobacteria,2K1IS@204457|Sphingomonadales	204457|Sphingomonadales	EM	ABC transporter permease	-	-	-	ko:K05845,ko:K05846	ko02010,map02010	M00209	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.12	-	-	BPD_transp_1,OpuAC
SRD3_k127_5185099_2	1112214.AHIS01000043_gene1850	1.259e-120	392.0	COG1125@1|root,COG1125@2|Bacteria,1QTUC@1224|Proteobacteria,2TTMA@28211|Alphaproteobacteria,2K132@204457|Sphingomonadales	204457|Sphingomonadales	E	ABC transporter, ATP-binding protein	-	-	-	ko:K05847	ko02010,map02010	M00209	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.12	-	-	ABC_tran
SRD3_k127_5185099_1	1112216.JH594425_gene1113	5.272e-123	415.0	COG4221@1|root,COG4221@2|Bacteria,1RAKI@1224|Proteobacteria,2TUJT@28211|Alphaproteobacteria,2K29E@204457|Sphingomonadales	204457|Sphingomonadales	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
SRD3_k127_5185099_7	1112214.AHIS01000043_gene1852	7.764e-46	167.0	COG2154@1|root,COG2154@2|Bacteria,1MZ5Q@1224|Proteobacteria,2UBWN@28211|Alphaproteobacteria,2K5VW@204457|Sphingomonadales	204457|Sphingomonadales	H	pterin-4-alpha-carbinolamine dehydratase	phhB	-	4.2.1.96	ko:K01724	ko00790,map00790	-	R04734	RC01208	ko00000,ko00001,ko01000,ko04147	-	-	-	Pterin_4a
SRD3_k127_5185099_6	1112214.AHIS01000043_gene1853	4.681e-67	229.0	COG3824@1|root,COG3824@2|Bacteria,1N18M@1224|Proteobacteria,2UBUK@28211|Alphaproteobacteria,2K6IY@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	Zincin_1
SRD3_k127_5185099_5	1112212.JH584235_gene1970	9.8e-73	250.0	COG4133@1|root,COG4133@2|Bacteria,1MZPC@1224|Proteobacteria,2TVBT@28211|Alphaproteobacteria,2K5BJ@204457|Sphingomonadales	204457|Sphingomonadales	O	once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system	ccmA	-	3.6.3.41	ko:K02193	ko02010,map02010	M00259	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.107	-	-	ABC_tran
SRD3_k127_5185099_3	1112214.AHIS01000043_gene1855	1.782e-95	321.0	COG2386@1|root,COG2386@2|Bacteria,1NJB0@1224|Proteobacteria,2TUSG@28211|Alphaproteobacteria,2K43Z@204457|Sphingomonadales	204457|Sphingomonadales	O	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes	ccmB	-	-	ko:K02194	ko02010,map02010	M00259	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.107	-	-	CcmB
SRD3_k127_5213178_0	190650.CC_0978	1.66e-255	802.0	COG3408@1|root,COG3408@2|Bacteria,1NJCP@1224|Proteobacteria,2U1JA@28211|Alphaproteobacteria,2KI0F@204458|Caulobacterales	204458|Caulobacterales	G	Bacterial alpha-L-rhamnosidase C-terminal domain	-	-	3.2.1.40	ko:K05989	-	-	-	-	ko00000,ko01000	-	-	-	Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N
SRD3_k127_5213178_4	1280954.HPO_15478	7.744e-109	372.0	COG2931@1|root,COG2931@2|Bacteria,1MU7T@1224|Proteobacteria,2TRVY@28211|Alphaproteobacteria,43ZJT@69657|Hyphomonadaceae	28211|Alphaproteobacteria	Q	Haemolysin-type calcium-binding repeat (2 copies)	-	-	-	-	-	-	-	-	-	-	-	-	HemolysinCabind,Peptidase_M10_C
SRD3_k127_5213178_6	1282360.ABAC460_04740	1.8e-40	173.0	COG2931@1|root,COG2931@2|Bacteria	2|Bacteria	Q	calcium- and calmodulin-responsive adenylate cyclase activity	-	-	-	-	-	-	-	-	-	-	-	-	HemolysinCabind
SRD3_k127_5213178_2	1346791.M529_04245	3.109e-142	460.0	COG0657@1|root,COG0657@2|Bacteria,1R79Q@1224|Proteobacteria,2U6W0@28211|Alphaproteobacteria,2K0EW@204457|Sphingomonadales	204457|Sphingomonadales	I	Dienelactone hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3
SRD3_k127_5213178_1	194867.ALBQ01000021_gene1924	1.971e-229	725.0	COG3534@1|root,COG3534@2|Bacteria,1R699@1224|Proteobacteria,2U4S3@28211|Alphaproteobacteria,2K1HM@204457|Sphingomonadales	204457|Sphingomonadales	G	Alpha-L-arabinofuranosidase C-terminus	-	-	3.2.1.55	ko:K01209	ko00520,map00520	-	R01762	-	ko00000,ko00001,ko01000	-	GH51	-	Alpha-L-AF_C
SRD3_k127_5213178_3	1007104.SUS17_1672	3.375e-112	374.0	COG2962@1|root,COG2962@2|Bacteria,1MX5G@1224|Proteobacteria,2TV8D@28211|Alphaproteobacteria,2K1SV@204457|Sphingomonadales	204457|Sphingomonadales	S	RarD protein	-	-	-	ko:K05786	-	-	-	-	ko00000,ko02000	2.A.7.7	-	-	EamA
SRD3_k127_5213178_5	663610.JQKO01000010_gene2254	1.085e-100	352.0	COG1752@1|root,COG1752@2|Bacteria,1N5JZ@1224|Proteobacteria,2UENP@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Esterase of the alpha-beta hydrolase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5213178_7	685778.AORL01000021_gene920	9.457e-31	127.0	COG3794@1|root,COG3794@2|Bacteria,1N2CZ@1224|Proteobacteria,2UEDD@28211|Alphaproteobacteria,2K66I@204457|Sphingomonadales	204457|Sphingomonadales	C	PFAM blue (type 1) copper domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Cupredoxin_1
SRD3_k127_5282047_5	13690.CP98_04780	2.73e-13	70.0	COG5579@1|root,COG5579@2|Bacteria,1RGXV@1224|Proteobacteria,2U9EH@28211|Alphaproteobacteria,2K605@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF1810)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1810
SRD3_k127_5282047_4	561231.Pecwa_1601	1.666e-39	157.0	28JV5@1|root,2Z9K4@2|Bacteria,1N7BQ@1224|Proteobacteria	1224|Proteobacteria	S	Domain of unknown function (DUF1837)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1837
SRD3_k127_5282047_0	1320556.AVBP01000003_gene3856	0.0	1638.0	COG1204@1|root,COG1204@2|Bacteria,1MW4Z@1224|Proteobacteria,2TT23@28211|Alphaproteobacteria	28211|Alphaproteobacteria	L	DEAD DEAH box helicase	-	-	-	-	-	-	-	-	-	-	-	-	DEAD,Helicase_C
SRD3_k127_5282047_1	1379701.JPJC01000057_gene3232	3.818e-200	641.0	COG0161@1|root,COG0161@2|Bacteria,1MU2N@1224|Proteobacteria,2TQND@28211|Alphaproteobacteria,2K04K@204457|Sphingomonadales	204457|Sphingomonadales	E	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	bioA	-	2.6.1.62	ko:K00833	ko00780,ko01100,map00780,map01100	M00123,M00573,M00577	R03231	RC00006,RC00887	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3
SRD3_k127_5282047_3	1549858.MC45_07860	2.363e-72	263.0	COG0132@1|root,COG0132@2|Bacteria,1RDRK@1224|Proteobacteria,2U5AJ@28211|Alphaproteobacteria,2K151@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring	bioD	-	2.1.1.197,6.3.3.3	ko:K01935,ko:K02169	ko00780,ko01100,map00780,map01100	M00123,M00572,M00573,M00577	R03182,R09543	RC00003,RC00460,RC00868	ko00000,ko00001,ko00002,ko01000	-	-	-	AAA_26
SRD3_k127_5282047_2	1112216.JH594425_gene1965	5.894e-150	482.0	COG0156@1|root,COG0156@2|Bacteria,1MVVH@1224|Proteobacteria,2TTAK@28211|Alphaproteobacteria,2JZVV@204457|Sphingomonadales	204457|Sphingomonadales	E	8-amino-7-oxononanoate synthase	bioF	-	2.3.1.47	ko:K00652	ko00780,ko01100,map00780,map01100	M00123,M00573,M00577	R03210,R10124	RC00004,RC00039,RC02725	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
SRD3_k127_5301420_5	1112214.AHIS01000027_gene1042	5.394e-32	125.0	COG0275@1|root,COG0275@2|Bacteria,1MUT4@1224|Proteobacteria,2TRQA@28211|Alphaproteobacteria,2K178@204457|Sphingomonadales	204457|Sphingomonadales	J	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA	rsmH	-	2.1.1.199	ko:K03438	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltransf_5
SRD3_k127_5301420_4	1112212.JH584235_gene1415	9.527e-48	177.0	2AK00@1|root,31APD@2|Bacteria,1NHHT@1224|Proteobacteria,2UM7C@28211|Alphaproteobacteria,2K3BJ@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5301420_0	1112216.JH594425_gene2049	9.972e-276	861.0	COG0768@1|root,COG0768@2|Bacteria,1MUNY@1224|Proteobacteria,2TSHQ@28211|Alphaproteobacteria,2K0Y2@204457|Sphingomonadales	204457|Sphingomonadales	M	Cell division protein FtsI penicillin-binding protein	ftsI	-	3.4.16.4	ko:K03587	ko00550,ko01501,map00550,map01501	-	-	-	ko00000,ko00001,ko01000,ko01011,ko03036	-	-	-	PBP_dimer,Transpeptidase
SRD3_k127_5301420_1	1112212.JH584235_gene1413	2.228e-246	780.0	COG0769@1|root,COG0769@2|Bacteria,1MU6P@1224|Proteobacteria,2TVXI@28211|Alphaproteobacteria,2K12F@204457|Sphingomonadales	204457|Sphingomonadales	M	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan	murE	-	6.3.2.13	ko:K01928	ko00300,ko00550,map00300,map00550	-	R02788	RC00064,RC00090	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
SRD3_k127_5301420_2	1112212.JH584235_gene1412	1.912e-221	694.0	COG0770@1|root,COG0770@2|Bacteria,1QTSF@1224|Proteobacteria,2TR0Q@28211|Alphaproteobacteria,2K1N2@204457|Sphingomonadales	204457|Sphingomonadales	M	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein	murF	-	6.3.2.10	ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	-	R04573,R04617	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
SRD3_k127_5301420_3	1112212.JH584235_gene1411	2.55e-203	638.0	COG0472@1|root,COG0472@2|Bacteria,1MUTK@1224|Proteobacteria,2TRUG@28211|Alphaproteobacteria,2K18Y@204457|Sphingomonadales	204457|Sphingomonadales	M	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan	mraY	-	2.7.8.13	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	-	R05629,R05630	RC00002,RC02753	ko00000,ko00001,ko01000,ko01011	9.B.146	-	-	Glycos_transf_4,MraY_sig1
SRD3_k127_5301420_6	194867.ALBQ01000011_gene284	5.929e-17	81.0	COG0771@1|root,COG0771@2|Bacteria,1MVYD@1224|Proteobacteria,2TTE8@28211|Alphaproteobacteria,2K1GM@204457|Sphingomonadales	204457|Sphingomonadales	M	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)	murD	-	6.3.2.9	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	-	R02783	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase_C,Mur_ligase_M
SRD3_k127_5323002_4	1112216.JH594425_gene3203	2.06e-42	158.0	COG1573@1|root,COG1573@2|Bacteria,1MWX1@1224|Proteobacteria,2UPFA@28211|Alphaproteobacteria,2KE1Y@204457|Sphingomonadales	204457|Sphingomonadales	L	uracil-DNA glycosylase	-	-	3.2.2.27	ko:K21929	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	UDG
SRD3_k127_5323002_0	1112212.JH584235_gene975	9.467e-289	898.0	COG0741@1|root,COG0741@2|Bacteria,1MV3F@1224|Proteobacteria,2U35U@28211|Alphaproteobacteria,2K136@204457|Sphingomonadales	204457|Sphingomonadales	M	COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)	-	-	-	-	-	-	-	-	-	-	-	-	SLT
SRD3_k127_5323002_1	1090319.KE386571_gene301	5.391e-94	316.0	COG0521@1|root,COG0521@2|Bacteria,1R9W2@1224|Proteobacteria,2TTA8@28211|Alphaproteobacteria,2K0DJ@204457|Sphingomonadales	204457|Sphingomonadales	H	May be involved in the biosynthesis of molybdopterin	moaB	-	2.7.7.75	ko:K03638	ko00790,ko01100,map00790,map01100	-	R09726	RC00002	ko00000,ko00001,ko01000	-	-	-	MoCF_biosynth
SRD3_k127_5323002_2	1248760.ANFZ01000009_gene851	5.5e-85	292.0	28N2A@1|root,2ZB84@2|Bacteria,1R8N1@1224|Proteobacteria,2U7C7@28211|Alphaproteobacteria,2K4F8@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5323002_3	1112216.JH594425_gene2012	2.149e-61	224.0	COG1289@1|root,COG1289@2|Bacteria,1PRVT@1224|Proteobacteria,2V43N@28211|Alphaproteobacteria,2K9H0@204457|Sphingomonadales	204457|Sphingomonadales	S	Fusaric acid resistance protein-like	-	-	-	-	-	-	-	-	-	-	-	-	FUSC_2
SRD3_k127_5326267_5	1112214.AHIS01000064_gene2707	1.283e-83	286.0	COG0639@1|root,COG0639@2|Bacteria,1RD8M@1224|Proteobacteria,2U7N2@28211|Alphaproteobacteria,2K1WW@204457|Sphingomonadales	204457|Sphingomonadales	T	COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases	-	-	3.1.3.16	ko:K07313	-	-	-	-	ko00000,ko01000	-	-	-	Metallophos
SRD3_k127_5326267_0	1090319.KE386571_gene3028	1.937e-180	567.0	COG0451@1|root,COG0451@2|Bacteria,1MXKV@1224|Proteobacteria,2TRM0@28211|Alphaproteobacteria,2K1V1@204457|Sphingomonadales	204457|Sphingomonadales	GM	GDP-mannose 4,6 dehydratase	-	-	4.1.1.35,5.1.3.2	ko:K01784,ko:K08678	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00361,M00362,M00632	R00291,R01384,R02984	RC00289,RC00508	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase,GDP_Man_Dehyd,Glyco_trans_1_2
SRD3_k127_5326267_9	380394.Lferr_0079	7.368e-47	187.0	COG2244@1|root,COG2244@2|Bacteria,1R6ME@1224|Proteobacteria,1S4F9@1236|Gammaproteobacteria,2NCHW@225057|Acidithiobacillales	225057|Acidithiobacillales	S	Polysaccharide biosynthesis protein	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_synt_3
SRD3_k127_5326267_10	521096.Tpau_1579	8.747e-12	77.0	COG0438@1|root,COG0438@2|Bacteria,2IA7N@201174|Actinobacteria	201174|Actinobacteria	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1
SRD3_k127_5326267_6	347834.RHE_CH00760	5.522e-78	269.0	COG1087@1|root,COG1087@2|Bacteria,1QX2P@1224|Proteobacteria,2TXX3@28211|Alphaproteobacteria	28211|Alphaproteobacteria	M	3-beta hydroxysteroid dehydrogenase/isomerase family	-	-	5.1.3.2	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00361,M00362,M00632	R00291,R02984	RC00289	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase
SRD3_k127_5326267_11	347834.RHE_CH00760	2.805e-10	62.0	COG1087@1|root,COG1087@2|Bacteria,1QX2P@1224|Proteobacteria,2TXX3@28211|Alphaproteobacteria	28211|Alphaproteobacteria	M	3-beta hydroxysteroid dehydrogenase/isomerase family	-	-	5.1.3.2	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00361,M00362,M00632	R00291,R02984	RC00289	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase
SRD3_k127_5326267_1	595460.RRSWK_01512	5.014e-131	427.0	COG1089@1|root,COG1089@2|Bacteria,2IWZ4@203682|Planctomycetes	203682|Planctomycetes	M	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose	-	-	4.2.1.47	ko:K01711	ko00051,ko00520,ko01100,map00051,map00520,map01100	-	R00888	RC00402	ko00000,ko00001,ko01000	-	-	-	GDP_Man_Dehyd
SRD3_k127_5326267_2	1123269.NX02_29735	1.375e-114	373.0	COG0476@1|root,COG0476@2|Bacteria,1MW7H@1224|Proteobacteria,2TRWY@28211|Alphaproteobacteria,2K1F9@204457|Sphingomonadales	204457|Sphingomonadales	H	COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2	moeB	-	2.7.7.80	ko:K21029	ko04122,map04122	-	R07459	RC00043	ko00000,ko00001,ko01000	-	-	-	ThiF
SRD3_k127_5326267_8	1112212.JH584235_gene3394	1.281e-48	181.0	2AKPA@1|root,31BFY@2|Bacteria,1P48H@1224|Proteobacteria,2UW82@28211|Alphaproteobacteria,2K56W@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5326267_7	1112212.JH584235_gene3395	6.971e-71	241.0	COG0452@1|root,COG0756@1|root,COG0452@2|Bacteria,COG0756@2|Bacteria,1MVQP@1224|Proteobacteria,2TRN1@28211|Alphaproteobacteria,2K0N6@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine	coaBC	-	4.1.1.36,6.3.2.5	ko:K13038	ko00770,ko01100,map00770,map01100	M00120	R03269,R04231	RC00064,RC00090,RC00822	ko00000,ko00001,ko00002,ko01000	-	-	-	DFP,Flavoprotein
SRD3_k127_5326267_3	1112216.JH594425_gene143	6.629e-103	337.0	COG0452@1|root,COG0452@2|Bacteria,1MVQP@1224|Proteobacteria,2TRN1@28211|Alphaproteobacteria,2K0N6@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine	coaBC	-	4.1.1.36,6.3.2.5	ko:K13038	ko00770,ko01100,map00770,map01100	M00120	R03269,R04231	RC00064,RC00090,RC00822	ko00000,ko00001,ko00002,ko01000	-	-	-	DFP,Flavoprotein
SRD3_k127_5326267_4	1112214.AHIS01000064_gene2715	1.906e-92	304.0	COG0452@1|root,COG0452@2|Bacteria,1MVQP@1224|Proteobacteria,2TRN1@28211|Alphaproteobacteria,2K0N6@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine	coaBC	-	4.1.1.36,6.3.2.5	ko:K13038	ko00770,ko01100,map00770,map01100	M00120	R03269,R04231	RC00064,RC00090,RC00822	ko00000,ko00001,ko00002,ko01000	-	-	-	DFP,Flavoprotein
SRD3_k127_5365839_2	1112214.AHIS01000073_gene3301	2.558e-75	254.0	COG0745@1|root,COG0745@2|Bacteria,1MU67@1224|Proteobacteria,2TRTZ@28211|Alphaproteobacteria,2K1RM@204457|Sphingomonadales	204457|Sphingomonadales	T	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	-	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
SRD3_k127_5365839_0	1112214.AHIS01000073_gene3302	2.886e-201	642.0	COG0642@1|root,COG2205@2|Bacteria,1MW8M@1224|Proteobacteria,2TUSJ@28211|Alphaproteobacteria,2K1K2@204457|Sphingomonadales	204457|Sphingomonadales	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
SRD3_k127_5365839_1	460265.Mnod_2791	1.052e-86	294.0	COG4291@1|root,COG4291@2|Bacteria,1RIAS@1224|Proteobacteria,2UHH1@28211|Alphaproteobacteria,1JUDG@119045|Methylobacteriaceae	28211|Alphaproteobacteria	S	membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5365839_4	1218076.BAYB01000014_gene3074	5.92e-45	177.0	COG1835@1|root,COG1835@2|Bacteria,1N0IA@1224|Proteobacteria,2WDB3@28216|Betaproteobacteria,1K9W9@119060|Burkholderiaceae	28216|Betaproteobacteria	I	Acyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
SRD3_k127_5365839_3	1112212.JH584235_gene1232	4.73e-69	235.0	COG0099@1|root,COG0099@2|Bacteria,1RD1G@1224|Proteobacteria,2U73D@28211|Alphaproteobacteria,2K4E3@204457|Sphingomonadales	204457|Sphingomonadales	J	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits	rpsM	-	-	ko:K02952	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S13
SRD3_k127_5452098_0	194867.ALBQ01000002_gene899	0.0	1205.0	COG0249@1|root,COG0249@2|Bacteria,1MUGX@1224|Proteobacteria,2TQRR@28211|Alphaproteobacteria,2K09S@204457|Sphingomonadales	204457|Sphingomonadales	L	that it carries out the mismatch recognition step. This protein has a weak ATPase activity	mutS	-	-	ko:K03555	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	MutS_I,MutS_II,MutS_III,MutS_IV,MutS_V
SRD3_k127_5452098_1	269482.Bcep1808_0268	1.087e-119	405.0	COG0476@1|root,COG0476@2|Bacteria,1PZJS@1224|Proteobacteria	1224|Proteobacteria	H	uBA THIF-type NAD FAD binding	-	-	-	-	-	-	-	-	-	-	-	-	ThiF
SRD3_k127_5452098_4	269482.Bcep1808_0269	3.893e-22	100.0	2E25F@1|root,32XCA@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5452098_5	644283.Micau_6052	4.921e-16	81.0	2EKA7@1|root,33E0G@2|Bacteria,2GV2K@201174|Actinobacteria	201174|Actinobacteria	S	Multiubiquitin	-	-	-	-	-	-	-	-	-	-	-	-	Multi_ubiq
SRD3_k127_5452098_3	266265.Bxe_B0115	5.177e-23	102.0	COG1396@1|root,COG1396@2|Bacteria,1NZR1@1224|Proteobacteria	1224|Proteobacteria	K	sequence-specific DNA binding	-	-	-	-	-	-	-	-	-	-	-	-	HTH_3
SRD3_k127_5452098_2	589865.DaAHT2_2027	5.644e-44	179.0	2AEJW@1|root,314FG@2|Bacteria,1NBZ3@1224|Proteobacteria,433QY@68525|delta/epsilon subdivisions	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C70
SRD3_k127_5452098_7	571166.KI421509_gene597	0.0005712	47.0	2E8HV@1|root,2ZM2W@2|Bacteria,1R39T@1224|Proteobacteria,2TZZQ@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5452098_6	571166.KI421509_gene597	4.552e-15	83.0	2E8HV@1|root,2ZM2W@2|Bacteria,1R39T@1224|Proteobacteria,2TZZQ@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5476952_1	1090320.KB900605_gene3257	5.702e-109	355.0	COG0119@1|root,COG0119@2|Bacteria,1MUNQ@1224|Proteobacteria,2TSCJ@28211|Alphaproteobacteria,2K1S1@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)	leuA	-	2.3.3.13	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	M00432	R01213	RC00004,RC00470,RC02754	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	HMGL-like,LeuA_dimer
SRD3_k127_5476952_0	1112214.AHIS01000015_gene143	9.156e-309	951.0	COG2509@1|root,COG2509@2|Bacteria,1MV6P@1224|Proteobacteria,2TSEQ@28211|Alphaproteobacteria,2K0P3@204457|Sphingomonadales	204457|Sphingomonadales	S	FAD dependent oxidoreductase	-	-	-	ko:K07137	-	-	-	-	ko00000	-	-	-	Amino_oxidase,FAD_binding_3
SRD3_k127_5476952_2	1112214.AHIS01000086_gene454	7.181e-56	197.0	COG1539@1|root,COG1539@2|Bacteria,1PSIE@1224|Proteobacteria,2UD0R@28211|Alphaproteobacteria,2K4H4@204457|Sphingomonadales	204457|Sphingomonadales	H	dihydroneopterin aldolase	-	-	1.13.11.81,4.1.2.25,5.1.99.8	ko:K01633	ko00790,ko01100,map00790,map01100	M00126,M00840	R03504,R11037,R11073	RC00721,RC00943,RC01479,RC03333,RC03334	ko00000,ko00001,ko00002,ko01000	-	-	-	FolB
SRD3_k127_5476952_4	1449076.JOOE01000001_gene2593	1.222e-09	59.0	COG1028@1|root,COG1028@2|Bacteria,1MUUV@1224|Proteobacteria,2TR0A@28211|Alphaproteobacteria,2K33T@204457|Sphingomonadales	204457|Sphingomonadales	IQ	COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SRD3_k127_5483161_11	1249627.D779_4062	1.25e-59	208.0	COG1743@1|root,COG1743@2|Bacteria,1QE0J@1224|Proteobacteria,1RZ3U@1236|Gammaproteobacteria,1WX57@135613|Chromatiales	135613|Chromatiales	L	DNA methylAse	-	-	-	-	-	-	-	-	-	-	-	-	DUF1156
SRD3_k127_5483161_7	627192.SLG_09530	1.099e-74	259.0	2ARZV@1|root,31HC0@2|Bacteria,1PAF4@1224|Proteobacteria	1224|Proteobacteria	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_2
SRD3_k127_5483161_19	317655.Sala_0777	4.439e-10	66.0	2BEJU@1|root,328B7@2|Bacteria,1P9ZY@1224|Proteobacteria,2UYCG@28211|Alphaproteobacteria,2KBW5@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5483161_3	1449076.JOOE01000001_gene2830	1.112e-105	350.0	COG3391@1|root,COG3391@2|Bacteria,1NE2A@1224|Proteobacteria,2UIB7@28211|Alphaproteobacteria,2K3Z5@204457|Sphingomonadales	204457|Sphingomonadales	S	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5483161_5	622637.KE124774_gene2921	1.138e-100	337.0	COG4638@1|root,COG4638@2|Bacteria,1MX47@1224|Proteobacteria,2TV03@28211|Alphaproteobacteria,36Z27@31993|Methylocystaceae	28211|Alphaproteobacteria	P	Rieske [2Fe-2S] domain	-	-	-	-	-	-	-	-	-	-	-	-	Rieske
SRD3_k127_5483161_15	1292034.OR37_03124	6.595e-38	158.0	COG1512@1|root,COG1512@2|Bacteria,1PB41@1224|Proteobacteria,2TUVD@28211|Alphaproteobacteria,2KGEM@204458|Caulobacterales	204458|Caulobacterales	S	TPM domain	-	-	-	ko:K06872	-	-	-	-	ko00000	-	-	-	TPM_phosphatase
SRD3_k127_5483161_8	13689.BV96_00441	5.731e-72	248.0	COG1335@1|root,COG1335@2|Bacteria,1MZP9@1224|Proteobacteria,2V933@28211|Alphaproteobacteria,2K475@204457|Sphingomonadales	204457|Sphingomonadales	Q	Isochorismatase family	-	-	-	-	-	-	-	-	-	-	-	-	Isochorismatase
SRD3_k127_5483161_21	504832.OCAR_5362	1.032e-05	50.0	COG3685@1|root,COG3685@2|Bacteria,1REKN@1224|Proteobacteria,2U66P@28211|Alphaproteobacteria,3JVCT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF892)	MA20_08255	-	-	-	-	-	-	-	-	-	-	-	DUF892
SRD3_k127_5483161_13	1122604.JONR01000008_gene2239	1.265e-44	166.0	COG3791@1|root,COG3791@2|Bacteria,1N1CH@1224|Proteobacteria,1T0TR@1236|Gammaproteobacteria,1XD1R@135614|Xanthomonadales	135614|Xanthomonadales	S	Glutathione-dependent formaldehyde-activating enzyme	-	-	-	-	-	-	-	-	-	-	-	-	GFA
SRD3_k127_5483161_1	1549858.MC45_18110	2.273e-160	525.0	COG0457@1|root,COG3577@1|root,COG0457@2|Bacteria,COG3577@2|Bacteria,1QW7M@1224|Proteobacteria,2U1I6@28211|Alphaproteobacteria,2K1K4@204457|Sphingomonadales	204457|Sphingomonadales	S	Aspartyl protease	-	-	-	-	-	-	-	-	-	-	-	-	Asp_protease_2,TPR_16
SRD3_k127_5483161_20	1174684.EBMC1_07125	3.388e-06	55.0	2DTSK@1|root,32UVT@2|Bacteria,1N20S@1224|Proteobacteria,2UCXK@28211|Alphaproteobacteria,2K628@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5483161_4	1112212.JH584235_gene3689	1.156e-104	354.0	COG0671@1|root,COG0671@2|Bacteria,1RJRW@1224|Proteobacteria,2U4D4@28211|Alphaproteobacteria,2K3EJ@204457|Sphingomonadales	204457|Sphingomonadales	I	PAP2 superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PAP2_3
SRD3_k127_5483161_2	1040989.AWZU01000044_gene6211	1.151e-143	460.0	COG2267@1|root,COG2267@2|Bacteria,1MUG8@1224|Proteobacteria,2TRUA@28211|Alphaproteobacteria,3JRAQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Function of homologous gene experimentally demonstrated in an other organism	-	-	1.11.1.10	ko:K00433	-	-	-	-	ko00000,ko01000	-	-	-	Abhydrolase_1
SRD3_k127_5483161_12	1112212.JH584235_gene3687	4.343e-58	208.0	COG3542@1|root,COG3542@2|Bacteria,1RHBE@1224|Proteobacteria,2U962@28211|Alphaproteobacteria,2K544@204457|Sphingomonadales	204457|Sphingomonadales	S	Cupin superfamily (DUF985)	-	-	-	ko:K09705	-	-	-	-	ko00000	-	-	-	Cupin_5
SRD3_k127_5483161_14	1112214.AHIS01000080_gene3589	1.353e-40	154.0	2BJDS@1|root,32DQ3@2|Bacteria,1NWA6@1224|Proteobacteria,2USD6@28211|Alphaproteobacteria,2K649@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5483161_9	1112216.JH594425_gene2407	6.783e-69	238.0	COG3871@1|root,COG3871@2|Bacteria,1RAVD@1224|Proteobacteria,2U923@28211|Alphaproteobacteria,2K55P@204457|Sphingomonadales	204457|Sphingomonadales	S	Pyridoxamine 5'-phosphate oxidase like	-	-	-	-	-	-	-	-	-	-	-	-	Pyrid_ox_like
SRD3_k127_5483161_10	1163408.UU9_08290	3.841e-60	217.0	2ANK7@1|root,31DJB@2|Bacteria,1R2CN@1224|Proteobacteria	1224|Proteobacteria	S	Cytochrome P460	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_P460
SRD3_k127_5483161_6	1121013.P873_13765	2.943e-78	274.0	COG4977@1|root,COG4977@2|Bacteria,1MUDK@1224|Proteobacteria,1S32F@1236|Gammaproteobacteria,1X6ED@135614|Xanthomonadales	135614|Xanthomonadales	K	DJ-1/PfpI family	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI,HTH_18
SRD3_k127_5483161_0	1112212.JH584235_gene3684	6.316e-294	910.0	COG4805@1|root,COG4805@2|Bacteria,1R5EP@1224|Proteobacteria,2U119@28211|Alphaproteobacteria,2K1J9@204457|Sphingomonadales	204457|Sphingomonadales	S	Bacterial protein of unknown function (DUF885)	-	-	-	-	-	-	-	-	-	-	-	-	DUF885
SRD3_k127_5483161_17	1112212.JH584235_gene3683	1.242e-35	138.0	COG2919@1|root,COG2919@2|Bacteria,1NGSW@1224|Proteobacteria,2UJYE@28211|Alphaproteobacteria,2K7B8@204457|Sphingomonadales	204457|Sphingomonadales	D	Septum formation initiator	-	-	-	-	-	-	-	-	-	-	-	-	DivIC
SRD3_k127_5483161_18	1112212.JH584235_gene3682	2.945e-22	96.0	COG0148@1|root,COG0148@2|Bacteria,1MU1N@1224|Proteobacteria,2TR04@28211|Alphaproteobacteria,2K00W@204457|Sphingomonadales	204457|Sphingomonadales	G	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis	eno	-	4.2.1.11	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	M00001,M00002,M00003,M00346,M00394	R00658	RC00349	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	-	-	-	Enolase_C,Enolase_N
SRD3_k127_5524706_1	518766.Rmar_0967	1.128e-42	168.0	COG0367@1|root,COG0367@2|Bacteria,4NFQ3@976|Bacteroidetes	976|Bacteroidetes	E	asparagine synthase (Glutamine-hydrolyzing	-	-	6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	-	R00578	RC00010	ko00000,ko00001,ko01000,ko01002	-	-	-	Asn_synthase,GATase_7
SRD3_k127_5524706_2	1174684.EBMC1_15297	2.62e-09	68.0	COG5265@1|root,COG5265@2|Bacteria,1MWU5@1224|Proteobacteria,2U7S8@28211|Alphaproteobacteria,2K15C@204457|Sphingomonadales	204457|Sphingomonadales	O	HPr kinase	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5524706_0	1123229.AUBC01000018_gene3716	1.341e-117	397.0	COG1032@1|root,COG1032@2|Bacteria,1NAY8@1224|Proteobacteria,2TV1I@28211|Alphaproteobacteria,3JXHB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Elongator protein 3, MiaB family, Radical SAM	-	-	-	-	-	-	-	-	-	-	-	-	Radical_SAM
SRD3_k127_5528043_2	1470591.BW41_03044	1.128e-221	689.0	COG0465@1|root,COG0465@2|Bacteria,1MU6J@1224|Proteobacteria,2TSYQ@28211|Alphaproteobacteria,2K1U5@204457|Sphingomonadales	204457|Sphingomonadales	O	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins	ftsH	-	-	ko:K03798	-	M00742	-	-	ko00000,ko00002,ko01000,ko01002,ko03110	-	-	-	AAA,FtsH_ext,Peptidase_M41
SRD3_k127_5528043_21	1248916.ANFY01000007_gene2481	7.474e-47	193.0	COG0666@1|root,COG0810@1|root,COG0666@2|Bacteria,COG0810@2|Bacteria,1RCAG@1224|Proteobacteria,2U664@28211|Alphaproteobacteria,2K6J3@204457|Sphingomonadales	204457|Sphingomonadales	M	COG0810 Periplasmic protein TonB, links inner and outer membranes	-	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_C
SRD3_k127_5528043_1	1248916.ANFY01000007_gene2482	4.235e-228	720.0	COG0443@1|root,COG0443@2|Bacteria,1MUR1@1224|Proteobacteria,2TURG@28211|Alphaproteobacteria,2K2PX@204457|Sphingomonadales	204457|Sphingomonadales	O	Belongs to the heat shock protein 70 family	-	-	-	ko:K04045	-	-	-	-	ko00000,ko03110	1.A.33	-	-	HSP70
SRD3_k127_5528043_24	194867.ALBQ01000053_gene1797	5.202e-29	124.0	2CDKF@1|root,2ZK98@2|Bacteria,1NME4@1224|Proteobacteria,2UMVV@28211|Alphaproteobacteria,2K6VZ@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5528043_6	1112212.JH584235_gene2836	9.19e-134	434.0	COG1566@1|root,COG1566@2|Bacteria,1R50C@1224|Proteobacteria,2TUCN@28211|Alphaproteobacteria,2K0QD@204457|Sphingomonadales	204457|Sphingomonadales	V	Protein of unknown function (DUF3667)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3667
SRD3_k127_5528043_3	194867.ALBQ01000053_gene1795	3.149e-184	587.0	COG0014@1|root,COG0014@2|Bacteria,1MUGJ@1224|Proteobacteria,2TS83@28211|Alphaproteobacteria,2K0DR@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate	proA	-	1.2.1.41	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	M00015	R03313	RC00684	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
SRD3_k127_5528043_26	1510531.JQJJ01000004_gene4590	9.573e-08	56.0	COG3905@1|root,COG3905@2|Bacteria,1PPS8@1224|Proteobacteria,2V4PW@28211|Alphaproteobacteria,3K5PY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Ribbon-helix-helix protein, copG family	-	-	-	-	-	-	-	-	-	-	-	-	RHH_1
SRD3_k127_5528043_9	1112214.AHIS01000078_gene3444	3.079e-108	356.0	COG1057@1|root,COG1057@2|Bacteria,1RD0J@1224|Proteobacteria,2U6ZC@28211|Alphaproteobacteria,2K3WB@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)	nadD	-	2.7.7.18	ko:K00969	ko00760,ko01100,map00760,map01100	M00115	R00137,R03005	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_like
SRD3_k127_5528043_18	1112216.JH594425_gene481	1.904e-59	212.0	COG0799@1|root,COG0799@2|Bacteria,1MZEF@1224|Proteobacteria,2UBSV@28211|Alphaproteobacteria,2K55D@204457|Sphingomonadales	204457|Sphingomonadales	J	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation	rsfS	-	-	ko:K09710	-	-	-	-	ko00000,ko03009	-	-	-	RsfS
SRD3_k127_5528043_15	1449076.JOOE01000004_gene49	1.691e-70	240.0	COG1576@1|root,COG1576@2|Bacteria,1R9Z2@1224|Proteobacteria,2U95Q@28211|Alphaproteobacteria,2K4F0@204457|Sphingomonadales	204457|Sphingomonadales	J	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA	rlmH	-	2.1.1.177	ko:K00783	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	SPOUT_MTase
SRD3_k127_5528043_4	1112214.AHIS01000078_gene3447	4.112e-163	525.0	COG4942@1|root,COG4942@2|Bacteria,1MY3E@1224|Proteobacteria,2TUSP@28211|Alphaproteobacteria,2K22Y@204457|Sphingomonadales	204457|Sphingomonadales	D	Membrane-bound metallopeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
SRD3_k127_5528043_0	1112216.JH594425_gene478	8.317e-229	715.0	COG0793@1|root,COG0793@2|Bacteria,1MU39@1224|Proteobacteria,2TRW2@28211|Alphaproteobacteria,2K0TK@204457|Sphingomonadales	204457|Sphingomonadales	M	Belongs to the peptidase S41A family	ctpA	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PDZ_2,Peptidase_S41
SRD3_k127_5528043_16	1112212.JH584235_gene2843	1.517e-67	233.0	COG1495@1|root,COG1495@2|Bacteria,1N89I@1224|Proteobacteria,2UF49@28211|Alphaproteobacteria,2K59V@204457|Sphingomonadales	204457|Sphingomonadales	O	Disulfide bond formation protein	-	-	-	-	-	-	-	-	-	-	-	-	DsbB
SRD3_k127_5528043_12	1112212.JH584235_gene2844	3.53e-87	299.0	COG2941@1|root,COG2941@2|Bacteria,1RAK4@1224|Proteobacteria,2U85I@28211|Alphaproteobacteria,2K46W@204457|Sphingomonadales	204457|Sphingomonadales	H	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol	coq7	-	-	ko:K06134	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00128	R04984,R08775	RC01254	ko00000,ko00001,ko00002,ko01000	-	-	-	COQ7
SRD3_k127_5528043_22	1090320.KB900605_gene1292	2.09e-45	170.0	2BJB4@1|root,2ZYMQ@2|Bacteria,1P61F@1224|Proteobacteria,2VGS8@28211|Alphaproteobacteria,2K47Q@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5528043_17	1112212.JH584235_gene2846	8.357e-65	226.0	COG5395@1|root,COG5395@2|Bacteria,1N0CF@1224|Proteobacteria,2UC5R@28211|Alphaproteobacteria,2K7AC@204457|Sphingomonadales	204457|Sphingomonadales	S	membrane	-	-	-	-	-	-	-	-	-	-	-	-	DUF2306
SRD3_k127_5528043_5	1112214.AHIS01000078_gene3453	3.426e-162	525.0	COG1807@1|root,COG1807@2|Bacteria,1QYQP@1224|Proteobacteria,2TXW3@28211|Alphaproteobacteria,2KETQ@204457|Sphingomonadales	204457|Sphingomonadales	M	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5528043_10	1449076.JOOE01000004_gene36	2.314e-99	329.0	COG0693@1|root,COG0693@2|Bacteria,1N8N6@1224|Proteobacteria,2TT0U@28211|Alphaproteobacteria,2K3CF@204457|Sphingomonadales	204457|Sphingomonadales	S	DJ-1/PfpI family	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI
SRD3_k127_5528043_7	1090320.KB900605_gene1395	1.003e-114	375.0	COG2162@1|root,COG2162@2|Bacteria,1RDF3@1224|Proteobacteria,2U82X@28211|Alphaproteobacteria,2KCJ7@204457|Sphingomonadales	204457|Sphingomonadales	Q	N-acetyltransferase	-	-	2.3.1.118	ko:K00675	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_2
SRD3_k127_5528043_20	1144343.PMI41_01955	2.501e-53	193.0	COG4420@1|root,COG4420@2|Bacteria,1RIDY@1224|Proteobacteria,2U9GU@28211|Alphaproteobacteria,43RHN@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1003)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1003
SRD3_k127_5528043_23	1030157.AFMP01000050_gene3	5.097e-38	146.0	COG0328@1|root,COG0328@2|Bacteria,1NMYY@1224|Proteobacteria,2UVQ5@28211|Alphaproteobacteria,2K655@204457|Sphingomonadales	204457|Sphingomonadales	L	Reverse transcriptase-like	-	-	3.1.26.4	ko:K03469	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	RVT_3
SRD3_k127_5528043_13	1030157.AFMP01000065_gene1126	1.389e-84	289.0	COG0625@1|root,COG0625@2|Bacteria,1RD2G@1224|Proteobacteria,2U7CB@28211|Alphaproteobacteria,2K3Y7@204457|Sphingomonadales	204457|Sphingomonadales	O	Glutathione S-transferase	-	-	-	-	-	-	-	-	-	-	-	-	GST_C_2,GST_N_3
SRD3_k127_5528043_19	1144310.PMI07_000589	5.087e-59	207.0	COG3791@1|root,COG3791@2|Bacteria,1N031@1224|Proteobacteria,2UC7G@28211|Alphaproteobacteria,4BG5B@82115|Rhizobiaceae	28211|Alphaproteobacteria	S	Glutathione-dependent formaldehyde-activating enzyme	-	-	-	-	-	-	-	-	-	-	-	-	GFA
SRD3_k127_5528043_8	1112212.JH584235_gene1846	3.68e-114	371.0	COG0586@1|root,COG0586@2|Bacteria,1RES0@1224|Proteobacteria,2U8WN@28211|Alphaproteobacteria,2K29C@204457|Sphingomonadales	204457|Sphingomonadales	S	SNARE associated Golgi protein	-	-	-	-	-	-	-	-	-	-	-	-	SNARE_assoc
SRD3_k127_5528043_14	1379701.JPJC01000277_gene538	1.922e-81	279.0	COG0120@1|root,COG0120@2|Bacteria,1MVGR@1224|Proteobacteria,2TU68@28211|Alphaproteobacteria,2K46T@204457|Sphingomonadales	204457|Sphingomonadales	G	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate	rpiA	-	5.3.1.6	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167,M00580	R01056	RC00434	ko00000,ko00001,ko00002,ko01000	-	-	-	Rib_5-P_isom_A
SRD3_k127_5528043_11	1112212.JH584235_gene1844	2.877e-98	324.0	COG0021@1|root,COG0021@2|Bacteria,1MUEY@1224|Proteobacteria,2TQUX@28211|Alphaproteobacteria,2K0UZ@204457|Sphingomonadales	204457|Sphingomonadales	G	Belongs to the transketolase family	tkt	-	2.2.1.1	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01067,R01641,R01830,R06590	RC00032,RC00226,RC00571,RC01560	ko00000,ko00001,ko00002,ko01000	-	-	-	Transket_pyr,Transketolase_C,Transketolase_N
SRD3_k127_5537522_4	161528.ED21_26648	1.228e-25	114.0	COG2931@1|root,COG3119@1|root,COG2931@2|Bacteria,COG3119@2|Bacteria,1MU7T@1224|Proteobacteria,2TRVY@28211|Alphaproteobacteria,2K0YG@204457|Sphingomonadales	204457|Sphingomonadales	Q	Haemolysin-type calcium-binding repeat (2 copies)	-	-	-	-	-	-	-	-	-	-	-	-	HemolysinCabind
SRD3_k127_5537522_6	1173024.KI912149_gene5584	6.988e-11	67.0	2DRDY@1|root,33BC0@2|Bacteria,1G9R7@1117|Cyanobacteria,1JMI1@1189|Stigonemataceae	1117|Cyanobacteria	S	Coenzyme PQQ synthesis protein D (PqqD)	-	-	-	-	-	-	-	-	-	-	-	-	PqqD
SRD3_k127_5537522_2	1379701.JPJC01000068_gene1749	1.12e-104	362.0	COG0367@1|root,COG0367@2|Bacteria,1R77U@1224|Proteobacteria,2U2VM@28211|Alphaproteobacteria,2K50X@204457|Sphingomonadales	204457|Sphingomonadales	E	Glutamine amidotransferase domain	-	-	6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	-	R00578	RC00010	ko00000,ko00001,ko01000,ko01002	-	-	-	Asn_synthase,GATase_7
SRD3_k127_5537522_3	1123267.JONN01000002_gene238	3.547e-56	208.0	COG1493@1|root,COG1493@2|Bacteria,1RE0J@1224|Proteobacteria,2U8MR@28211|Alphaproteobacteria,2K5WU@204457|Sphingomonadales	204457|Sphingomonadales	T	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5537522_5	1112214.AHIS01000077_gene3779	1.935e-16	92.0	COG1802@1|root,COG1802@2|Bacteria,1RAW8@1224|Proteobacteria,2U5UI@28211|Alphaproteobacteria,2K2VZ@204457|Sphingomonadales	204457|Sphingomonadales	K	FCD	-	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SRD3_k127_5537522_0	190650.CC_1135	7.053e-226	715.0	COG0366@1|root,COG0366@2|Bacteria,1MVKX@1224|Proteobacteria,2TRS3@28211|Alphaproteobacteria,2KF9J@204458|Caulobacterales	204458|Caulobacterales	G	Alpha amylase, catalytic domain	-	-	2.4.1.4	ko:K05341	ko00500,map00500	-	R01823	RC00028	ko00000,ko00001,ko01000	-	GH13	-	Alpha-amylase
SRD3_k127_5537522_1	1292034.OR37_02327	3.751e-189	599.0	COG2272@1|root,COG2272@2|Bacteria,1MVQZ@1224|Proteobacteria,2TTHT@28211|Alphaproteobacteria,2KHUT@204458|Caulobacterales	204458|Caulobacterales	I	Belongs to the type-B carboxylesterase lipase family	-	-	-	ko:K03929	-	-	-	-	ko00000,ko01000	-	CE10	-	COesterase
SRD3_k127_5554422_2	1112216.JH594425_gene84	2.035e-107	351.0	COG0483@1|root,COG0483@2|Bacteria,1MV4W@1224|Proteobacteria,2TV4R@28211|Alphaproteobacteria,2K171@204457|Sphingomonadales	204457|Sphingomonadales	G	Inositol monophosphatase	-	-	3.1.3.25	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	M00131	R01185,R01186,R01187	RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	Inositol_P
SRD3_k127_5554422_0	1112212.JH584235_gene1560	1.273e-230	719.0	COG0312@1|root,COG0312@2|Bacteria,1MUVW@1224|Proteobacteria,2TSAV@28211|Alphaproteobacteria,2K048@204457|Sphingomonadales	204457|Sphingomonadales	S	modulator of DNA gyrase	pmbA	-	-	ko:K03592	-	-	-	-	ko00000,ko01002	-	-	-	PmbA_TldD
SRD3_k127_5554422_1	1081640.AGFU01000091_gene2796	9.831e-131	423.0	COG0382@1|root,COG0382@2|Bacteria,1MV4Q@1224|Proteobacteria,2TT3I@28211|Alphaproteobacteria,2K0XU@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate	ubiA	-	2.5.1.39	ko:K03179	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00117	R05000,R05615	RC00209,RC02895	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	UbiA
SRD3_k127_5554422_3	1449076.JOOE01000001_gene2741	4.495e-76	263.0	COG4270@1|root,COG4270@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DoxX
SRD3_k127_5554422_4	745310.G432_04580	5.446e-73	248.0	COG0454@1|root,COG0456@2|Bacteria,1RHB3@1224|Proteobacteria,2U5BX@28211|Alphaproteobacteria,2KD8A@204457|Sphingomonadales	204457|Sphingomonadales	K	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases	-	-	-	ko:K03829	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_1
SRD3_k127_5554422_7	551275.KB899544_gene1141	2.821e-41	164.0	2DHFK@1|root,32U96@2|Bacteria,1N6CG@1224|Proteobacteria,2UGMD@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5554422_5	1112216.JH594425_gene89	4.979e-62	214.0	COG1385@1|root,COG1385@2|Bacteria,1MXCU@1224|Proteobacteria,2TS0N@28211|Alphaproteobacteria,2K0TB@204457|Sphingomonadales	204457|Sphingomonadales	J	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit	rsmE	-	2.1.1.193	ko:K09761	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltrans_RNA
SRD3_k127_5554422_6	1007104.SUS17_2523	8.099e-53	187.0	COG1385@1|root,COG1385@2|Bacteria,1MXCU@1224|Proteobacteria,2TS0N@28211|Alphaproteobacteria,2K0TB@204457|Sphingomonadales	204457|Sphingomonadales	J	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit	rsmE	-	2.1.1.193	ko:K09761	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltrans_RNA
SRD3_k127_5559440_3	1379701.JPJC01000095_gene2340	7.307e-89	294.0	COG0491@1|root,COG0491@2|Bacteria,1MUXF@1224|Proteobacteria,2TSYY@28211|Alphaproteobacteria,2K1NF@204457|Sphingomonadales	204457|Sphingomonadales	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
SRD3_k127_5559440_4	1550073.JROH01000075_gene2928	4.156e-11	71.0	COG0412@1|root,COG0412@2|Bacteria,1MW7S@1224|Proteobacteria,2TTPH@28211|Alphaproteobacteria,2K1JX@204457|Sphingomonadales	204457|Sphingomonadales	Q	dienelactone hydrolase	-	-	3.1.1.45	ko:K01061	ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130	-	R03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222	RC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686	ko00000,ko00001,ko01000	-	-	-	DLH
SRD3_k127_5559440_2	1112212.JH584235_gene1494	2.569e-107	352.0	COG0625@1|root,COG0625@2|Bacteria,1RA05@1224|Proteobacteria,2TS58@28211|Alphaproteobacteria,2K1M0@204457|Sphingomonadales	204457|Sphingomonadales	O	Glutathione S-transferase	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_2,GST_N,GST_N_3
SRD3_k127_5559440_5	69395.JQLZ01000005_gene3651	4.487e-11	65.0	COG3313@1|root,COG3313@2|Bacteria,1NGD5@1224|Proteobacteria,2UJKX@28211|Alphaproteobacteria,2KH8U@204458|Caulobacterales	204458|Caulobacterales	S	Protein of unknown function (DUF1289)	-	-	-	ko:K06938	-	-	-	-	ko00000	-	-	-	DUF1289
SRD3_k127_5559440_0	1112212.JH584235_gene1493	7.736e-232	726.0	COG0513@1|root,COG0513@2|Bacteria,1MU49@1224|Proteobacteria,2TR6Q@28211|Alphaproteobacteria,2K0CY@204457|Sphingomonadales	204457|Sphingomonadales	L	Belongs to the DEAD box helicase family	-	-	-	-	-	-	-	-	-	-	-	-	DEAD,Helicase_C
SRD3_k127_5559440_1	1121022.ABENE_11800	1.542e-116	377.0	COG2382@1|root,COG2382@2|Bacteria,1QU4Q@1224|Proteobacteria,2UCAB@28211|Alphaproteobacteria	28211|Alphaproteobacteria	P	Putative esterase	-	-	-	ko:K07214	-	-	-	-	ko00000	-	-	-	CBM_48,Esterase
SRD3_k127_5592181_8	1007104.SUS17_1400	1.612e-10	72.0	2DRXE@1|root,33DIB@2|Bacteria,1NCY9@1224|Proteobacteria,2UIMP@28211|Alphaproteobacteria,2K7SP@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF3606)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3606
SRD3_k127_5592181_4	1112214.AHIS01000139_gene3868	1.491e-87	301.0	COG5592@1|root,COG5592@2|Bacteria,1N6KG@1224|Proteobacteria,2UCBE@28211|Alphaproteobacteria,2K1MZ@204457|Sphingomonadales	204457|Sphingomonadales	S	Hemerythrin HHE cation binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Hemerythrin
SRD3_k127_5592181_2	1502850.FG91_02117	2.036e-92	310.0	COG1376@1|root,COG1376@2|Bacteria,1R7VK@1224|Proteobacteria,2UPBM@28211|Alphaproteobacteria,2K2IN@204457|Sphingomonadales	204457|Sphingomonadales	S	ErfK ybiS ycfS ynhG family protein	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5592181_7	1449076.JOOE01000004_gene485	1.21e-36	144.0	29WB0@1|root,30HWH@2|Bacteria,1N3IB@1224|Proteobacteria,2UDM1@28211|Alphaproteobacteria,2K62V@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	ko:K06078	-	-	-	-	ko00000,ko01011	-	-	-	-
SRD3_k127_5592181_3	1096546.WYO_4538	2.768e-89	304.0	COG2267@1|root,COG2267@2|Bacteria,1QU7K@1224|Proteobacteria,2TW27@28211|Alphaproteobacteria,1JRFW@119045|Methylobacteriaceae	28211|Alphaproteobacteria	I	PFAM alpha beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
SRD3_k127_5592181_5	196490.AUEZ01000044_gene6962	1.073e-62	225.0	COG0625@1|root,COG0625@2|Bacteria,1NUET@1224|Proteobacteria,2TRGC@28211|Alphaproteobacteria,3JRC3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, C-terminal domain	MA20_18540	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C_2,GST_N_3
SRD3_k127_5592181_0	685778.AORL01000010_gene2842	1e-323	1003.0	COG3590@1|root,COG3590@2|Bacteria,1MVNQ@1224|Proteobacteria,2TRU4@28211|Alphaproteobacteria,2K1AP@204457|Sphingomonadales	204457|Sphingomonadales	O	Peptidase family M13	-	-	-	ko:K07386	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M13,Peptidase_M13_N
SRD3_k127_5592181_1	1112214.AHIS01000015_gene134	1.497e-321	992.0	COG4799@1|root,COG4799@2|Bacteria,1MVAX@1224|Proteobacteria,2TRA0@28211|Alphaproteobacteria,2K0B0@204457|Sphingomonadales	204457|Sphingomonadales	I	acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)	-	-	6.4.1.4	ko:K01969	ko00280,ko01100,map00280,map01100	M00036	R04138	RC00367,RC00942	ko00000,ko00001,ko00002,ko01000	-	-	-	Carboxyl_trans
SRD3_k127_5592181_6	1379701.JPJC01000014_gene181	3.76e-62	219.0	2CM2H@1|root,32SDI@2|Bacteria,1NPEY@1224|Proteobacteria,2UJZ9@28211|Alphaproteobacteria,2K430@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Lumazine_bd_2
SRD3_k127_5593907_0	595536.ADVE02000001_gene850	6.173e-188	604.0	COG0367@1|root,COG0367@2|Bacteria,1MW4E@1224|Proteobacteria,2TSCY@28211|Alphaproteobacteria,36Y0V@31993|Methylocystaceae	28211|Alphaproteobacteria	E	Glutamine amidotransferase domain	-	-	6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	-	R00578	RC00010	ko00000,ko00001,ko01000,ko01002	-	-	-	Asn_synthase,GATase_7
SRD3_k127_5593907_6	1123270.ATUR01000008_gene261	4.703e-76	262.0	COG0639@1|root,COG0639@2|Bacteria,1RD8M@1224|Proteobacteria,2U7N2@28211|Alphaproteobacteria,2K1WW@204457|Sphingomonadales	204457|Sphingomonadales	T	COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases	-	-	3.1.3.16	ko:K07313	-	-	-	-	ko00000,ko01000	-	-	-	Metallophos
SRD3_k127_5593907_2	1112216.JH594425_gene732	1.922e-161	513.0	COG0451@1|root,COG0451@2|Bacteria,1MU7J@1224|Proteobacteria,2TSIP@28211|Alphaproteobacteria,2K0VH@204457|Sphingomonadales	204457|Sphingomonadales	M	epimerase dehydratase	-	-	5.1.3.6	ko:K08679	ko00520,ko01100,map00520,map01100	-	R01385	RC00289	ko00000,ko00001,ko01000	-	-	-	Epimerase,GDP_Man_Dehyd
SRD3_k127_5593907_1	1112214.AHIS01000077_gene3754	6.197e-176	563.0	COG0677@1|root,COG0677@2|Bacteria,1MUC6@1224|Proteobacteria,2TR5F@28211|Alphaproteobacteria,2K04J@204457|Sphingomonadales	204457|Sphingomonadales	M	Belongs to the UDP-glucose GDP-mannose dehydrogenase family	-	-	1.1.1.136	ko:K02474,ko:K13015	ko00520,map00520	-	R00421,R06894	RC00291	ko00000,ko00001,ko01000,ko01005	-	-	-	UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N
SRD3_k127_5593907_3	935557.ATYB01000008_gene5074	4.102e-142	466.0	COG1088@1|root,COG1088@2|Bacteria,1MU5E@1224|Proteobacteria,2TT5T@28211|Alphaproteobacteria,4B78X@82115|Rhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily	rfbB	GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008460,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016829,GO:0016835,GO:0016836,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0045226,GO:0046379,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509	4.2.1.46	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	M00793	R06513	RC00402	ko00000,ko00001,ko00002,ko01000	-	-	-	GDP_Man_Dehyd
SRD3_k127_5593907_7	1157708.KB907457_gene2672	0.0001823	50.0	2DM8K@1|root,326DU@2|Bacteria,1R9P7@1224|Proteobacteria,2VY05@28216|Betaproteobacteria,4AGG1@80864|Comamonadaceae	28216|Betaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5593907_4	629773.AORY01000021_gene2344	2.538e-136	446.0	COG2148@1|root,COG2148@2|Bacteria,1MV6W@1224|Proteobacteria,2U148@28211|Alphaproteobacteria,2KD5X@204457|Sphingomonadales	204457|Sphingomonadales	M	Bacterial sugar transferase	-	-	2.7.8.40	ko:K21303	-	-	-	-	ko00000,ko01000,ko01003,ko01005	-	-	-	Bac_transf
SRD3_k127_5593907_5	1280944.HY17_19100	2.678e-90	310.0	COG0438@1|root,COG0438@2|Bacteria,1MY5T@1224|Proteobacteria,2TSZW@28211|Alphaproteobacteria	28211|Alphaproteobacteria	M	glycosyl transferase	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
SRD3_k127_5612256_3	1112216.JH594425_gene916	3.201e-142	452.0	COG1222@1|root,COG1222@2|Bacteria,1QTV4@1224|Proteobacteria,2U0Q7@28211|Alphaproteobacteria,2K0N9@204457|Sphingomonadales	204457|Sphingomonadales	O	Belongs to the AAA ATPase family	-	-	-	ko:K13525	ko04141,ko05134,map04141,map05134	M00400,M00403	-	-	ko00000,ko00001,ko00002,ko03019,ko04131,ko04147	3.A.16.1	-	-	AAA,CDC48_2,CDC48_N
SRD3_k127_5612256_2	1112216.JH594425_gene917	1.186e-166	526.0	COG0583@1|root,COG0583@2|Bacteria,1R69A@1224|Proteobacteria,2U1WB@28211|Alphaproteobacteria,2K166@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	-	-	-	ko:K03566	ko02026,map02026	-	-	-	ko00000,ko00001,ko03000	-	-	-	HTH_1,LysR_substrate
SRD3_k127_5612256_5	1112212.JH584235_gene2169	6.71e-85	284.0	COG0652@1|root,COG0652@2|Bacteria,1R9ZQ@1224|Proteobacteria,2U591@28211|Alphaproteobacteria,2K3YQ@204457|Sphingomonadales	204457|Sphingomonadales	O	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides	-	-	5.2.1.8	ko:K01802	-	-	-	-	ko00000,ko01000	-	-	-	Pro_isomerase
SRD3_k127_5612256_1	1112214.AHIS01000047_gene1940	6.651e-248	771.0	COG2239@1|root,COG2239@2|Bacteria,1MW24@1224|Proteobacteria,2TRWK@28211|Alphaproteobacteria,2K0AK@204457|Sphingomonadales	204457|Sphingomonadales	P	Acts as a magnesium transporter	mgtE	-	-	ko:K06213	-	-	-	-	ko00000,ko02000	1.A.26.1	-	-	CBS,MgtE,MgtE_N
SRD3_k127_5612256_9	1112216.JH594425_gene920	6.416e-60	209.0	COG5458@1|root,COG5458@2|Bacteria,1N054@1224|Proteobacteria,2UBY1@28211|Alphaproteobacteria,2K5VN@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF1489)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1489
SRD3_k127_5612256_8	1112216.JH594425_gene921	6.246e-64	227.0	2DR57@1|root,33A7H@2|Bacteria,1NQIV@1224|Proteobacteria,2UR69@28211|Alphaproteobacteria,2K7FF@204457|Sphingomonadales	204457|Sphingomonadales	S	Putative auto-transporter adhesin, head GIN domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF2807
SRD3_k127_5612256_6	1112212.JH584235_gene2173	1.149e-81	278.0	COG3595@1|root,COG3595@2|Bacteria,1N374@1224|Proteobacteria,2UDAB@28211|Alphaproteobacteria,2K1A2@204457|Sphingomonadales	204457|Sphingomonadales	S	Putative auto-transporter adhesin, head GIN domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF2807
SRD3_k127_5612256_4	1112212.JH584235_gene2174	2.134e-100	332.0	COG1329@1|root,COG1329@2|Bacteria,1MWI2@1224|Proteobacteria,2TTVP@28211|Alphaproteobacteria,2K0TA@204457|Sphingomonadales	204457|Sphingomonadales	K	CarD family transcriptional regulator	-	-	-	ko:K07736	-	-	-	-	ko00000,ko03000	-	-	-	CarD_CdnL_TRCF
SRD3_k127_5612256_7	1112216.JH594425_gene924	1.744e-70	239.0	COG1146@1|root,COG1146@2|Bacteria,1RH5I@1224|Proteobacteria,2U98K@28211|Alphaproteobacteria,2K4E8@204457|Sphingomonadales	204457|Sphingomonadales	C	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions	-	-	-	ko:K05524	-	-	-	-	ko00000	-	-	-	DUF3470,Fer4
SRD3_k127_5612256_10	1379701.JPJC01000064_gene1382	1.845e-31	128.0	COG1188@1|root,COG1188@2|Bacteria,1MZR6@1224|Proteobacteria,2UBS3@28211|Alphaproteobacteria,2K6XI@204457|Sphingomonadales	204457|Sphingomonadales	J	COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	hslR	-	-	ko:K04762	-	-	-	-	ko00000,ko03110	-	-	-	S4
SRD3_k127_5612256_0	1112216.JH594425_gene926	0.0	1093.0	COG4581@1|root,COG4581@2|Bacteria,1MVD6@1224|Proteobacteria,2TR7N@28211|Alphaproteobacteria,2JZXM@204457|Sphingomonadales	204457|Sphingomonadales	L	helicase	-	-	3.6.4.13	ko:K17675	-	-	-	-	ko00000,ko01000,ko03029	-	-	-	Helicase_C
SRD3_k127_5614909_1	1449076.JOOE01000002_gene835	8.674e-153	487.0	COG2159@1|root,COG2159@2|Bacteria,1Q704@1224|Proteobacteria,2VD3Z@28211|Alphaproteobacteria,2K7IV@204457|Sphingomonadales	204457|Sphingomonadales	S	Amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_2
SRD3_k127_5614909_4	1120705.FG95_01938	7.53e-36	143.0	COG3311@1|root,COG3311@2|Bacteria,1R8IB@1224|Proteobacteria,2U5Z2@28211|Alphaproteobacteria,2K9TV@204457|Sphingomonadales	204457|Sphingomonadales	K	Helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_17
SRD3_k127_5614909_2	1267534.KB906759_gene1774	1.822e-73	269.0	COG4219@1|root,COG4219@2|Bacteria,3Y4QS@57723|Acidobacteria,2JKFK@204432|Acidobacteriia	204432|Acidobacteriia	KT	BlaR1 peptidase M56	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M56
SRD3_k127_5614909_3	1121022.ABENE_01580	6.428e-42	157.0	COG3682@1|root,COG3682@2|Bacteria,1RBWP@1224|Proteobacteria,2U5ER@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	Penicillinase_R
SRD3_k127_5614909_0	1112212.JH584235_gene3295	3.163e-207	651.0	COG0860@1|root,COG0860@2|Bacteria,1MUQK@1224|Proteobacteria,2U0K2@28211|Alphaproteobacteria,2K2BU@204457|Sphingomonadales	204457|Sphingomonadales	M	N-acetylmuramoyl-L-alanine amidase	-	-	3.5.1.28	ko:K01448	ko01503,map01503	M00727	R04112	RC00064,RC00141	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	-	-	-	AMIN,Amidase_3
SRD3_k127_5614909_5	745310.G432_09360	3.96e-17	80.0	COG1530@1|root,COG1530@2|Bacteria,1MV65@1224|Proteobacteria,2TRX2@28211|Alphaproteobacteria,2K00N@204457|Sphingomonadales	204457|Sphingomonadales	J	Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs	rne	-	3.1.26.12	ko:K08300	ko03018,map03018	M00394	-	-	ko00000,ko00001,ko00002,ko01000,ko03009,ko03019	-	-	-	RNase_E_G,S1
SRD3_k127_5641212_15	1112214.AHIS01000095_gene850	1.503e-49	178.0	COG0477@1|root,COG2814@2|Bacteria,1QTX0@1224|Proteobacteria,2TUM5@28211|Alphaproteobacteria,2K1MY@204457|Sphingomonadales	204457|Sphingomonadales	EGP	COG0477 Permeases of the major facilitator superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,MFS_3
SRD3_k127_5641212_21	745411.B3C1_04530	3.424e-05	53.0	2EPMV@1|root,33H8H@2|Bacteria,1NTQZ@1224|Proteobacteria,1SJR9@1236|Gammaproteobacteria	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5641212_20	1121957.ATVL01000014_gene1443	1.474e-07	61.0	COG5479@1|root,COG5479@2|Bacteria,4P3FJ@976|Bacteroidetes,47V74@768503|Cytophagia	976|Bacteroidetes	M	LGFP repeat	-	-	-	-	-	-	-	-	-	-	-	-	LGFP
SRD3_k127_5641212_19	342113.DM82_1022	2.396e-28	126.0	COG0583@1|root,COG0583@2|Bacteria,1MUWX@1224|Proteobacteria,2VKVG@28216|Betaproteobacteria,1K2XM@119060|Burkholderiaceae	28216|Betaproteobacteria	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SRD3_k127_5641212_3	629773.AORY01000012_gene777	1.054e-196	617.0	COG1071@1|root,COG1071@2|Bacteria,1MU5R@1224|Proteobacteria,2TRSS@28211|Alphaproteobacteria,2K0VG@204457|Sphingomonadales	204457|Sphingomonadales	C	The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)	pdhA	-	1.2.4.1	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	M00307	R00014,R00209,R01699,R03270	RC00004,RC00027,RC00627,RC02742,RC02744,RC02882	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	E1_dh
SRD3_k127_5641212_2	1545915.JROG01000003_gene1433	3.379e-223	704.0	COG0022@1|root,COG0022@2|Bacteria,1R8KB@1224|Proteobacteria,2TRMR@28211|Alphaproteobacteria,2JZYC@204457|Sphingomonadales	204457|Sphingomonadales	C	The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)	pdhB	-	1.2.4.1	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	M00307	R00014,R00209,R01699,R03270	RC00004,RC00027,RC00627,RC02742,RC02744,RC02882	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_lipoyl,Transket_pyr,Transketolase_C
SRD3_k127_5641212_4	1112212.JH584235_gene3831	7.565e-178	576.0	COG4961@1|root,COG4961@2|Bacteria,1NN97@1224|Proteobacteria,2TS6W@28211|Alphaproteobacteria,2K37B@204457|Sphingomonadales	204457|Sphingomonadales	U	Putative Flp pilus-assembly TadE/G-like	-	-	-	-	-	-	-	-	-	-	-	-	Tad
SRD3_k127_5641212_10	1112212.JH584235_gene3832	1.23e-62	229.0	COG4961@1|root,COG4961@2|Bacteria,1N744@1224|Proteobacteria,2UGR2@28211|Alphaproteobacteria,2K62P@204457|Sphingomonadales	204457|Sphingomonadales	U	Flp pilus assembly protein TadG	-	-	-	-	-	-	-	-	-	-	-	-	TadE
SRD3_k127_5641212_12	1112212.JH584235_gene3833	1.987e-59	212.0	COG4961@1|root,COG4961@2|Bacteria,1N3XK@1224|Proteobacteria,2UBRJ@28211|Alphaproteobacteria,2K6GE@204457|Sphingomonadales	204457|Sphingomonadales	U	TadE-like protein	-	-	-	-	-	-	-	-	-	-	-	-	TadE
SRD3_k127_5641212_8	1112214.AHIS01000095_gene847	1.568e-76	262.0	COG1562@1|root,COG1562@2|Bacteria,1N5V2@1224|Proteobacteria,2UBZJ@28211|Alphaproteobacteria,2K4II@204457|Sphingomonadales	204457|Sphingomonadales	I	ergosterol biosynthetic process	-	-	2.5.1.32,2.5.1.99	ko:K02291	ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110	M00097	R02065,R04218,R07270,R10177	RC00362,RC01101,RC02869	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	SQS_PSY
SRD3_k127_5641212_14	1112212.JH584235_gene3835	1.01e-49	182.0	28ZT0@1|root,2ZMHP@2|Bacteria,1NE00@1224|Proteobacteria,2UFWH@28211|Alphaproteobacteria,2KE7S@204457|Sphingomonadales	204457|Sphingomonadales	S	EF hand	-	-	-	-	-	-	-	-	-	-	-	-	EF-hand_5
SRD3_k127_5641212_1	1112214.AHIS01000095_gene845	6.28e-256	796.0	COG1206@1|root,COG1206@2|Bacteria,1MWNQ@1224|Proteobacteria,2TR6M@28211|Alphaproteobacteria,2K17V@204457|Sphingomonadales	204457|Sphingomonadales	J	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs	trmFO	-	2.1.1.74	ko:K04094	-	-	-	-	ko00000,ko01000,ko03016,ko03036	-	-	-	GIDA
SRD3_k127_5641212_6	1449049.JONW01000002_gene2426	4.823e-110	362.0	COG1396@1|root,COG1396@2|Bacteria,1MWUC@1224|Proteobacteria,2TU04@28211|Alphaproteobacteria,2KHXN@204458|Caulobacterales	204458|Caulobacterales	K	Helix-turn-helix XRE-family like proteins	-	-	-	-	-	-	-	-	-	-	-	-	HTH_31
SRD3_k127_5641212_7	1112212.JH584235_gene3838	7.653e-96	318.0	COG1510@1|root,COG1510@2|Bacteria,1RA49@1224|Proteobacteria,2U2X2@28211|Alphaproteobacteria,2K484@204457|Sphingomonadales	204457|Sphingomonadales	K	Belongs to the GbsR family	-	-	-	-	-	-	-	-	-	-	-	-	MarR_2
SRD3_k127_5641212_16	279238.Saro_1916	1.731e-49	185.0	COG3714@1|root,COG3714@2|Bacteria,1RFIR@1224|Proteobacteria,2U8S6@28211|Alphaproteobacteria,2K4YA@204457|Sphingomonadales	204457|Sphingomonadales	S	YhhN family	-	-	-	-	-	-	-	-	-	-	-	-	YhhN
SRD3_k127_5641212_9	1112212.JH584235_gene3840	4.685e-70	239.0	COG5483@1|root,COG5483@2|Bacteria,1N3XQ@1224|Proteobacteria,2UCV7@28211|Alphaproteobacteria,2K4V4@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function, DUF488	-	-	-	-	-	-	-	-	-	-	-	-	DUF488
SRD3_k127_5641212_17	1112212.JH584235_gene3841	1.425e-47	172.0	COG3502@1|root,COG3502@2|Bacteria,1MZEQ@1224|Proteobacteria,2UBR3@28211|Alphaproteobacteria,2K5DW@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF952)	-	-	-	-	-	-	-	-	-	-	-	-	DUF952
SRD3_k127_5641212_18	1123267.JONN01000001_gene1430	4.895e-31	131.0	2AKT1@1|root,31BK2@2|Bacteria,1NXBB@1224|Proteobacteria,2UTRK@28211|Alphaproteobacteria,2K5KP@204457|Sphingomonadales	204457|Sphingomonadales	S	PilZ domain	-	-	-	-	-	-	-	-	-	-	-	-	PilZ
SRD3_k127_5641212_13	595536.ADVE02000001_gene3315	4.519e-51	198.0	COG0457@1|root,COG0457@2|Bacteria	595536.ADVE02000001_gene3315|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5641212_11	1040982.AXAL01000011_gene1080	3.827e-60	221.0	2AGQY@1|root,2ZVHH@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5641212_5	1040982.AXAL01000011_gene1081	4.609e-148	472.0	COG4260@1|root,COG4260@2|Bacteria,1NSNG@1224|Proteobacteria	1224|Proteobacteria	S	SPFH domain-Band 7 family	-	-	-	-	-	-	-	-	-	-	-	-	Band_7_1
SRD3_k127_5641212_0	1207055.C100_20685	0.0	1208.0	COG0188@1|root,COG0188@2|Bacteria,1MUGG@1224|Proteobacteria,2TSPQ@28211|Alphaproteobacteria,2K02J@204457|Sphingomonadales	204457|Sphingomonadales	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	gyrA	-	5.99.1.3	ko:K02469	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	DNA_gyraseA_C,DNA_topoisoIV
SRD3_k127_5699308_1	1030157.AFMP01000059_gene2845	3.736e-85	293.0	COG2845@1|root,COG2845@2|Bacteria,1R4X7@1224|Proteobacteria,2U5AU@28211|Alphaproteobacteria,2K3BW@204457|Sphingomonadales	204457|Sphingomonadales	S	G-D-S-L family	-	-	-	ko:K09795	-	-	-	-	ko00000	-	-	-	DUF459,Lipase_GDSL_2
SRD3_k127_5699308_0	1030157.AFMP01000059_gene2846	4.91e-131	432.0	COG2755@1|root,COG2755@2|Bacteria,1MXSG@1224|Proteobacteria,2U8U1@28211|Alphaproteobacteria,2K1JF@204457|Sphingomonadales	204457|Sphingomonadales	E	GDSL-like Lipase/Acylhydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL,Lipase_GDSL_2
SRD3_k127_5699308_2	392499.Swit_3460	1.028e-70	242.0	COG1696@1|root,COG1696@2|Bacteria,1MUXN@1224|Proteobacteria,2TRD1@28211|Alphaproteobacteria,2K0G7@204457|Sphingomonadales	204457|Sphingomonadales	M	Membrane bound O-acyl transferase, MBOAT family protein	-	-	-	-	-	-	-	-	-	-	-	-	MBOAT
SRD3_k127_5710650_4	1449076.JOOE01000002_gene888	3.387e-57	205.0	2DPW6@1|root,333NE@2|Bacteria,1RKH2@1224|Proteobacteria,2UAYE@28211|Alphaproteobacteria,2K5NB@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5710650_1	1081640.AGFU01000009_gene1392	1.129e-79	271.0	COG4278@1|root,COG4278@2|Bacteria,1RKAG@1224|Proteobacteria,2U3DR@28211|Alphaproteobacteria,2K4R3@204457|Sphingomonadales	204457|Sphingomonadales	H	phenylacetate-CoA ligase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5710650_3	1449076.JOOE01000002_gene888	9.46e-60	216.0	2DPW6@1|root,333NE@2|Bacteria,1RKH2@1224|Proteobacteria,2UAYE@28211|Alphaproteobacteria,2K5NB@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5710650_6	366602.Caul_1534	4.087e-47	177.0	2CB8S@1|root,30PE6@2|Bacteria,1RG91@1224|Proteobacteria,2U7BM@28211|Alphaproteobacteria,2KGWR@204458|Caulobacterales	204458|Caulobacterales	S	Protein of unknown function (DUF4199)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4199
SRD3_k127_5710650_7	1502850.FG91_03199	2.063e-38	149.0	COG2197@1|root,COG2197@2|Bacteria,1N0NK@1224|Proteobacteria,2UCCE@28211|Alphaproteobacteria,2K7CV@204457|Sphingomonadales	204457|Sphingomonadales	KT	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE
SRD3_k127_5710650_2	1112212.JH584235_gene831	1.611e-71	244.0	COG4253@1|root,COG4253@2|Bacteria,1RJSI@1224|Proteobacteria,2UAVI@28211|Alphaproteobacteria,2K54I@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5710650_5	1112212.JH584235_gene830	8.068e-48	176.0	COG2847@1|root,COG2847@2|Bacteria,1N3BG@1224|Proteobacteria,2UM57@28211|Alphaproteobacteria,2K60Y@204457|Sphingomonadales	204457|Sphingomonadales	S	Copper chaperone PCu(A)C	-	-	-	ko:K09796	-	-	-	-	ko00000,ko03110	-	-	-	PCuAC
SRD3_k127_5710650_0	1030157.AFMP01000044_gene1939	1.517e-117	381.0	COG0443@1|root,COG0443@2|Bacteria,1MVEN@1224|Proteobacteria,2TR5H@28211|Alphaproteobacteria,2K1KK@204457|Sphingomonadales	204457|Sphingomonadales	O	Heat shock 70 kDa protein	dnaK	-	-	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	1.A.33.1	-	-	HSP70
SRD3_k127_5711102_3	69395.JQLZ01000001_gene3196	2.438e-216	682.0	COG3511@1|root,COG3511@2|Bacteria,1MWVP@1224|Proteobacteria,2TSIK@28211|Alphaproteobacteria,2KHXY@204458|Caulobacterales	204458|Caulobacterales	M	phospholipase C, phosphocholine-specific	-	-	3.1.4.3	ko:K01114	ko00562,ko00564,ko00565,ko01100,ko01110,ko02024,ko04919,map00562,map00564,map00565,map01100,map01110,map02024,map04919	-	R01312,R02027,R02052,R03332,R07381	RC00017,RC00425	ko00000,ko00001,ko01000,ko02042	-	-	-	DUF756,Phosphoesterase
SRD3_k127_5711102_2	1112214.AHIS01000095_gene709	2.895e-289	902.0	COG0457@1|root,COG0457@2|Bacteria,1MVMG@1224|Proteobacteria,2TSGE@28211|Alphaproteobacteria,2K04M@204457|Sphingomonadales	204457|Sphingomonadales	S	Sulfotransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Sulfotransfer_3,TPR_16,TPR_19,TPR_8
SRD3_k127_5711102_1	983920.Y88_0697	0.0	1328.0	COG4774@1|root,COG4774@2|Bacteria,1QXWU@1224|Proteobacteria,2TZ8R@28211|Alphaproteobacteria,2KERA@204457|Sphingomonadales	204457|Sphingomonadales	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SRD3_k127_5711102_4	1112214.AHIS01000095_gene707	1.143e-129	429.0	COG0583@1|root,COG0583@2|Bacteria,1MWVU@1224|Proteobacteria,2U1KV@28211|Alphaproteobacteria,2K4RX@204457|Sphingomonadales	204457|Sphingomonadales	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SRD3_k127_5711102_5	1112214.AHIS01000095_gene713	2.692e-52	190.0	COG4341@1|root,COG4341@2|Bacteria,1N0MY@1224|Proteobacteria,2U2KT@28211|Alphaproteobacteria,2K598@204457|Sphingomonadales	204457|Sphingomonadales	S	Metal dependent phosphohydrolases with conserved 'HD' motif.	-	-	-	-	-	-	-	-	-	-	-	-	HD
SRD3_k127_5711102_0	1112216.JH594425_gene517	0.0	1402.0	COG0542@1|root,COG0542@2|Bacteria,1MURH@1224|Proteobacteria,2TRKI@28211|Alphaproteobacteria,2K00X@204457|Sphingomonadales	204457|Sphingomonadales	O	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE	clpB	-	-	ko:K03695	ko04213,map04213	-	-	-	ko00000,ko00001,ko03110	-	-	-	AAA,AAA_2,ClpB_D2-small,Clp_N
SRD3_k127_5721559_8	627192.SLG_26780	1.396e-76	260.0	COG0071@1|root,COG0071@2|Bacteria,1RH2X@1224|Proteobacteria,2U96D@28211|Alphaproteobacteria,2K489@204457|Sphingomonadales	204457|Sphingomonadales	O	Belongs to the small heat shock protein (HSP20) family	-	-	-	ko:K04080	-	-	-	-	ko00000,ko03110	-	-	-	HSP20
SRD3_k127_5721559_1	1112214.AHIS01000077_gene3809	9.423e-178	568.0	COG1914@1|root,COG1914@2|Bacteria,1MW6X@1224|Proteobacteria,2TRNM@28211|Alphaproteobacteria,2K3P4@204457|Sphingomonadales	204457|Sphingomonadales	P	Natural resistance-associated macrophage protein	-	-	-	-	-	-	-	-	-	-	-	-	Nramp
SRD3_k127_5721559_10	1112212.JH584235_gene3329	4.328e-28	119.0	2ER9Q@1|root,33IVB@2|Bacteria,1NJ3C@1224|Proteobacteria,2UK03@28211|Alphaproteobacteria,2K77T@204457|Sphingomonadales	204457|Sphingomonadales	S	UvrB/uvrC motif	-	-	-	-	-	-	-	-	-	-	-	-	UVR
SRD3_k127_5721559_13	266835.14027826	1.655e-11	67.0	28Y0W@1|root,2ZJWJ@2|Bacteria,1P6XX@1224|Proteobacteria,2UX36@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5721559_4	392499.Swit_0874	1.584e-168	537.0	COG3214@1|root,COG3214@2|Bacteria,1N40B@1224|Proteobacteria,2TT7U@28211|Alphaproteobacteria,2K0ZV@204457|Sphingomonadales	204457|Sphingomonadales	S	Winged helix DNA-binding domain	-	-	-	ko:K09927	-	-	-	-	ko00000	-	-	-	HTH_42
SRD3_k127_5721559_12	983920.Y88_3453	5.608e-15	80.0	2AMM4@1|root,31CH4@2|Bacteria,1NASQ@1224|Proteobacteria,2UI4C@28211|Alphaproteobacteria,2K7B5@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5721559_9	1123269.NX02_24130	7.197e-64	224.0	COG0432@1|root,COG0432@2|Bacteria,1RH13@1224|Proteobacteria,2U945@28211|Alphaproteobacteria,2K4HM@204457|Sphingomonadales	204457|Sphingomonadales	S	Uncharacterised protein family UPF0047	-	-	-	-	-	-	-	-	-	-	-	-	UPF0047
SRD3_k127_5721559_7	1187851.A33M_2390	6.406e-84	288.0	COG2367@1|root,COG2367@2|Bacteria,1NMW4@1224|Proteobacteria,2TX7R@28211|Alphaproteobacteria,3FE4G@34008|Rhodovulum	28211|Alphaproteobacteria	V	Beta-lactamase	-	-	3.5.2.6	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	M00627,M00628	R06363	RC01499	ko00000,ko00001,ko00002,ko01000,ko01504	-	-	-	Beta-lactamase2
SRD3_k127_5721559_5	1123269.NX02_04700	6.171e-166	527.0	COG0389@1|root,COG0389@2|Bacteria,1MUUH@1224|Proteobacteria,2TSJN@28211|Alphaproteobacteria,2K1Q4@204457|Sphingomonadales	204457|Sphingomonadales	L	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII	dinB	-	2.7.7.7	ko:K02346	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	IMS,IMS_C,IMS_HHH
SRD3_k127_5721559_11	1123269.NX02_03735	2.831e-26	116.0	2DN4B@1|root,32VFQ@2|Bacteria,1QYAE@1224|Proteobacteria,2VGIX@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2490)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2490
SRD3_k127_5721559_2	1379701.JPJC01000060_gene3162	1.294e-173	548.0	COG0306@1|root,COG0306@2|Bacteria,1MVXK@1224|Proteobacteria,2TSYI@28211|Alphaproteobacteria,2JZVM@204457|Sphingomonadales	204457|Sphingomonadales	P	phosphate transporter	-	-	-	ko:K03306	-	-	-	-	ko00000	2.A.20	-	-	PHO4
SRD3_k127_5721559_3	745310.G432_09250	5.173e-169	539.0	COG1392@1|root,COG1392@2|Bacteria,1R4SP@1224|Proteobacteria,2U5E0@28211|Alphaproteobacteria,2KD7U@204457|Sphingomonadales	204457|Sphingomonadales	P	Protein of unknown function DUF47	-	-	-	ko:K07220	-	-	-	-	ko00000	-	-	-	NUDIX,PhoU_div
SRD3_k127_5721559_6	1112216.JH594425_gene1756	5.232e-107	359.0	COG1011@1|root,COG1011@2|Bacteria,1MU1H@1224|Proteobacteria,2TQVC@28211|Alphaproteobacteria,2K3WH@204457|Sphingomonadales	204457|Sphingomonadales	S	Haloacid dehalogenase	-	-	3.8.1.2	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	-	R05287	RC00697	ko00000,ko00001,ko01000	-	-	-	HAD_2,Hydrolase
SRD3_k127_5721559_0	1112216.JH594425_gene1755	3.819e-183	578.0	COG0079@1|root,COG0079@2|Bacteria,1MW7I@1224|Proteobacteria,2TQPN@28211|Alphaproteobacteria,2JZXY@204457|Sphingomonadales	204457|Sphingomonadales	E	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily	hisC	-	2.6.1.9	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	M00026	R00694,R00734,R03243	RC00006,RC00888	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
SRD3_k127_5726354_11	211114.JOEF01000007_gene872	1.201e-10	68.0	2EA9M@1|root,334E1@2|Bacteria,2I49S@201174|Actinobacteria,4E605@85010|Pseudonocardiales	201174|Actinobacteria	S	CHRD domain	-	-	-	-	-	-	-	-	-	-	-	-	CHRD
SRD3_k127_5726354_8	1120705.FG95_02246	1.561e-52	188.0	COG0346@1|root,COG0346@2|Bacteria,1N0XB@1224|Proteobacteria,2UD3M@28211|Alphaproteobacteria,2K5IX@204457|Sphingomonadales	204457|Sphingomonadales	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase,Glyoxalase_4
SRD3_k127_5726354_7	1123269.NX02_24465	5.886e-68	234.0	COG0789@1|root,COG0789@2|Bacteria,1RH2U@1224|Proteobacteria,2U73A@28211|Alphaproteobacteria,2K4YD@204457|Sphingomonadales	204457|Sphingomonadales	K	transcriptional	soxR	-	-	ko:K13639	-	-	-	-	ko00000,ko03000	-	-	-	MerR,MerR-DNA-bind,MerR_1
SRD3_k127_5726354_9	1101191.KI912577_gene355	8.785e-49	179.0	2EA29@1|root,3347F@2|Bacteria,1N9NB@1224|Proteobacteria,2UF6X@28211|Alphaproteobacteria,1JYDK@119045|Methylobacteriaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5726354_4	1112212.JH584235_gene2446	1.76e-111	364.0	COG0204@1|root,COG0204@2|Bacteria,1MY51@1224|Proteobacteria,2TT3P@28211|Alphaproteobacteria,2K3XJ@204457|Sphingomonadales	204457|Sphingomonadales	I	Acyltransferase	plsC	-	2.3.1.51	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R02241,R09381	RC00004,RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyltransferase
SRD3_k127_5726354_6	1112212.JH584235_gene2447	8.418e-75	255.0	COG1434@1|root,COG1434@2|Bacteria,1RHMV@1224|Proteobacteria,2U957@28211|Alphaproteobacteria,2K4KS@204457|Sphingomonadales	204457|Sphingomonadales	S	DUF218 domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF218
SRD3_k127_5726354_3	1112212.JH584235_gene2448	4.433e-126	411.0	COG2177@1|root,COG2177@2|Bacteria,1MXKQ@1224|Proteobacteria,2TSNT@28211|Alphaproteobacteria,2K43P@204457|Sphingomonadales	204457|Sphingomonadales	D	Cell division protein	ftsX	-	-	ko:K09811	ko02010,map02010	M00256	-	-	ko00000,ko00001,ko00002,ko02000,ko03036	3.A.1.140	-	-	FtsX
SRD3_k127_5726354_2	1112212.JH584235_gene2449	4.23e-138	442.0	COG2884@1|root,COG2884@2|Bacteria,1MVQ4@1224|Proteobacteria,2TS9Y@28211|Alphaproteobacteria,2JZVB@204457|Sphingomonadales	204457|Sphingomonadales	D	cell division	ftsE	-	-	ko:K09812	ko02010,map02010	M00256	-	-	ko00000,ko00001,ko00002,ko02000,ko03036	3.A.1.140	-	-	ABC_tran
SRD3_k127_5726354_10	1545915.JROG01000008_gene3466	2.539e-35	144.0	2E521@1|root,32ZVA@2|Bacteria,1RF95@1224|Proteobacteria,2U8QW@28211|Alphaproteobacteria,2K2DR@204457|Sphingomonadales	204457|Sphingomonadales	S	zinc-ribbon domain	-	-	-	-	-	-	-	-	-	-	-	-	zinc_ribbon_4
SRD3_k127_5726354_0	1470591.BW41_03513	3.181e-177	565.0	COG0534@1|root,COG0534@2|Bacteria,1MUAM@1224|Proteobacteria,2TSDU@28211|Alphaproteobacteria,2K152@204457|Sphingomonadales	204457|Sphingomonadales	V	Na -driven multidrug efflux pump	-	-	-	ko:K03327	-	-	-	-	ko00000,ko02000	2.A.66.1	-	-	MatE
SRD3_k127_5726354_1	1112214.AHIS01000047_gene2040	3.192e-168	535.0	COG3424@1|root,COG3424@2|Bacteria,1MUDX@1224|Proteobacteria,2TRTX@28211|Alphaproteobacteria,2K1FI@204457|Sphingomonadales	204457|Sphingomonadales	Q	Chalcone and stilbene synthases, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Chal_sti_synt_C,Chal_sti_synt_N
SRD3_k127_5726354_5	1112214.AHIS01000047_gene2041	1.883e-89	300.0	COG0500@1|root,COG0500@2|Bacteria,1RESN@1224|Proteobacteria,2U9WF@28211|Alphaproteobacteria,2K139@204457|Sphingomonadales	204457|Sphingomonadales	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_25
SRD3_k127_5763721_1	46429.BV95_04136	0.0	1090.0	COG0492@1|root,COG0664@1|root,COG1142@1|root,COG0492@2|Bacteria,COG0664@2|Bacteria,COG1142@2|Bacteria,1QUPD@1224|Proteobacteria,2TW3N@28211|Alphaproteobacteria,2K28S@204457|Sphingomonadales	204457|Sphingomonadales	C	4Fe-4S dicluster domain	-	-	-	-	-	-	-	-	-	-	-	-	Fer4_7,Pyr_redox_2,Pyr_redox_3,cNMP_binding
SRD3_k127_5763721_10	452662.SJA_C2-02920	1.402e-134	434.0	29W19@1|root,30HJP@2|Bacteria,1R60N@1224|Proteobacteria,2TV4D@28211|Alphaproteobacteria,2K2WI@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5763721_7	46429.BV95_04134	1.777e-260	815.0	COG1716@1|root,COG1716@2|Bacteria,1R72N@1224|Proteobacteria,2U42V@28211|Alphaproteobacteria,2K0ZA@204457|Sphingomonadales	204457|Sphingomonadales	C	Cytochrome c3	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_c3_2
SRD3_k127_5763721_11	1219045.BV98_003860	4.295e-122	397.0	COG1409@1|root,COG1409@2|Bacteria,1MWKX@1224|Proteobacteria,2U5HA@28211|Alphaproteobacteria,2K0A3@204457|Sphingomonadales	204457|Sphingomonadales	S	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes	cpdA	-	3.1.4.53	ko:K03651	ko00230,ko02025,map00230,map02025	-	R00191	RC00296	ko00000,ko00001,ko01000	-	-	-	Metallophos
SRD3_k127_5763721_0	46429.BV95_04132	0.0	2278.0	COG5276@1|root,COG5276@2|Bacteria,1R66X@1224|Proteobacteria,2U4DF@28211|Alphaproteobacteria,2K18I@204457|Sphingomonadales	204457|Sphingomonadales	S	LVIVD repeat	-	-	-	-	-	-	-	-	-	-	-	-	LVIVD
SRD3_k127_5763721_2	452662.SJA_C2-02960	1.857e-320	989.0	COG3827@1|root,COG3827@2|Bacteria,1QQR0@1224|Proteobacteria,2U38X@28211|Alphaproteobacteria,2K2AW@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5763721_3	1219045.BV98_003855	1.095e-306	951.0	COG3193@1|root,COG3193@2|Bacteria,1R3RC@1224|Proteobacteria,2U39K@28211|Alphaproteobacteria,2K2UI@204457|Sphingomonadales	204457|Sphingomonadales	S	Haem-degrading	-	-	-	-	-	-	-	-	-	-	-	-	Haem_degrading
SRD3_k127_5763721_8	1335760.ASTG01000019_gene2755	2.173e-210	663.0	COG3391@1|root,COG3391@2|Bacteria,1MXXH@1224|Proteobacteria,2TW31@28211|Alphaproteobacteria,2K2PG@204457|Sphingomonadales	204457|Sphingomonadales	S	Cytochrome c554 and c-prime	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_C554
SRD3_k127_5763721_5	1123269.NX02_11270	1.217e-279	863.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TTJP@28211|Alphaproteobacteria,2K07M@204457|Sphingomonadales	204457|Sphingomonadales	C	belongs to the aldehyde dehydrogenase family	-	-	-	-	-	-	-	-	-	-	-	-	Aldedh
SRD3_k127_5763721_4	1030157.AFMP01000028_gene2307	2.527e-306	944.0	COG0028@1|root,COG0028@2|Bacteria,1MU6U@1224|Proteobacteria,2TSB1@28211|Alphaproteobacteria,2K1IG@204457|Sphingomonadales	204457|Sphingomonadales	EH	Belongs to the TPP enzyme family	-	-	2.2.1.6	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R00006,R00014,R00226,R03050,R04672,R04673,R08648	RC00027,RC00106,RC01192,RC02744,RC02893	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
SRD3_k127_5763721_6	1248760.ANFZ01000006_gene2729	1.458e-260	807.0	COG0334@1|root,COG0334@2|Bacteria,1MUMF@1224|Proteobacteria,2TSZY@28211|Alphaproteobacteria,2K25I@204457|Sphingomonadales	204457|Sphingomonadales	E	Belongs to the Glu Leu Phe Val dehydrogenases family	-	-	1.4.1.3,1.4.1.4	ko:K00261,ko:K00262	ko00220,ko00250,ko00471,ko00910,ko01100,ko01200,ko04217,ko04964,map00220,map00250,map00471,map00910,map01100,map01200,map04217,map04964	M00740	R00243,R00248	RC00006,RC02799	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ELFV_dehydrog,ELFV_dehydrog_N
SRD3_k127_5763721_13	1121123.AUAO01000001_gene769	7.572e-78	269.0	COG4254@1|root,COG4254@2|Bacteria,1N739@1224|Proteobacteria,2UFJF@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	FecR protein	-	-	-	-	-	-	-	-	-	-	-	-	FecR
SRD3_k127_5763721_9	1112216.JH594425_gene2905	3.555e-151	490.0	COG4320@1|root,COG4320@2|Bacteria,1Q5DN@1224|Proteobacteria,2TSED@28211|Alphaproteobacteria,2K2UQ@204457|Sphingomonadales	204457|Sphingomonadales	S	Uncharacterized protein conserved in bacteria (DUF2252)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2252
SRD3_k127_5763721_16	190650.CC_2380	0.0003855	43.0	COG0438@1|root,COG0438@2|Bacteria	2|Bacteria	M	transferase activity, transferring glycosyl groups	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glycos_transf_1
SRD3_k127_5763721_12	1112214.AHIS01000098_gene1443	2.289e-97	322.0	COG2518@1|root,COG2518@2|Bacteria,1RD6S@1224|Proteobacteria,2U704@28211|Alphaproteobacteria,2K2P0@204457|Sphingomonadales	204457|Sphingomonadales	O	protein-L-isoaspartate	-	-	2.1.1.77	ko:K00573	-	-	-	-	ko00000,ko01000	-	-	-	PCMT
SRD3_k127_5763721_15	1112212.JH584235_gene1069	1.213e-23	102.0	COG1538@1|root,COG1538@2|Bacteria,1MWCJ@1224|Proteobacteria,2TR3S@28211|Alphaproteobacteria,2JZY5@204457|Sphingomonadales	204457|Sphingomonadales	MU	membrane	-	-	-	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	1.B.17,2.A.6.2	-	-	OEP
SRD3_k127_5765462_7	1346791.M529_07215	9.135e-124	407.0	COG3386@1|root,COG3386@2|Bacteria,1MU0C@1224|Proteobacteria,2TSXG@28211|Alphaproteobacteria,2K05D@204457|Sphingomonadales	204457|Sphingomonadales	G	Gluconolactonase	-	-	3.1.1.17	ko:K01053	ko00030,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00030,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220	M00129	R01519,R02933,R03751	RC00537,RC00983	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	SGL
SRD3_k127_5765462_11	1346791.M529_07210	4.711e-19	94.0	COG1555@1|root,COG1555@2|Bacteria	2|Bacteria	L	photosystem II stabilization	comEA	-	-	ko:K02237	-	M00429	-	-	ko00000,ko00002,ko02044	3.A.11.1,3.A.11.2	-	-	HHH_3
SRD3_k127_5765462_0	1346791.M529_07205	1.102e-263	833.0	COG4993@1|root,COG4993@2|Bacteria,1MUQX@1224|Proteobacteria,2TS2Q@28211|Alphaproteobacteria,2K1V6@204457|Sphingomonadales	204457|Sphingomonadales	G	PQQ-like domain	-	-	1.1.5.2	ko:K00117	ko00030,ko01100,ko01110,ko01130,map00030,map01100,map01110,map01130	-	R06620	RC00066	ko00000,ko00001,ko01000	-	-	-	Cytochrome_CBB3,PQQ,PQQ_2
SRD3_k127_5765462_8	452662.SJA_C2-01010	1.162e-118	389.0	COG0662@1|root,COG0662@2|Bacteria,1NIGU@1224|Proteobacteria,2UQAN@28211|Alphaproteobacteria,2K9RU@204457|Sphingomonadales	204457|Sphingomonadales	G	Cupin domain	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
SRD3_k127_5765462_5	452662.SJA_C2-01020	7.963e-186	590.0	COG2271@1|root,COG2271@2|Bacteria,1MVPS@1224|Proteobacteria,2TTHW@28211|Alphaproteobacteria,2K50I@204457|Sphingomonadales	204457|Sphingomonadales	G	Major Facilitator Superfamily	-	-	-	ko:K03535	-	-	-	-	ko00000,ko02000	2.A.1.14.1	-	-	MFS_1
SRD3_k127_5765462_2	1346791.M529_07200	1.146e-216	700.0	COG1804@1|root,COG1804@2|Bacteria,1MU2K@1224|Proteobacteria,2TR7Q@28211|Alphaproteobacteria,2K4D7@204457|Sphingomonadales	204457|Sphingomonadales	C	CoA-transferase family III	-	-	-	-	-	-	-	-	-	-	-	-	CoA_transf_3
SRD3_k127_5765462_9	1090318.ATTI01000001_gene971	1.077e-108	361.0	COG1024@1|root,COG1024@2|Bacteria,1MXBB@1224|Proteobacteria,2TSPM@28211|Alphaproteobacteria,2K92A@204457|Sphingomonadales	204457|Sphingomonadales	I	Belongs to the enoyl-CoA hydratase isomerase family	-	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SRD3_k127_5765462_1	452662.SJA_C2-00930	2.121e-234	737.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,2K9VK@204457|Sphingomonadales	204457|Sphingomonadales	C	belongs to the aldehyde dehydrogenase family	-	-	1.2.1.16,1.2.1.20,1.2.1.79	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	M00027	R00713,R00714,R02401	RC00080	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
SRD3_k127_5765462_4	452662.SJA_C2-00920	7.702e-186	590.0	COG1454@1|root,COG1454@2|Bacteria,1MVPH@1224|Proteobacteria,2TSX8@28211|Alphaproteobacteria,2K2EM@204457|Sphingomonadales	204457|Sphingomonadales	C	alcohol dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Fe-ADH
SRD3_k127_5765462_10	452662.SJA_C1-15940	1.024e-27	123.0	COG3474@1|root,COG3474@2|Bacteria,1MZGS@1224|Proteobacteria,2UCUT@28211|Alphaproteobacteria,2K4M2@204457|Sphingomonadales	204457|Sphingomonadales	C	Cytochrome c	-	-	-	ko:K08738	ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	3.D.4.6	-	-	Cytochrom_C
SRD3_k127_5765462_6	1090318.ATTI01000001_gene966	1.167e-160	517.0	COG2271@1|root,COG2271@2|Bacteria,1MVPS@1224|Proteobacteria,2TTHW@28211|Alphaproteobacteria,2K02B@204457|Sphingomonadales	204457|Sphingomonadales	G	Major Facilitator Superfamily	-	-	-	ko:K03535	-	-	-	-	ko00000,ko02000	2.A.1.14.1	-	-	MFS_1
SRD3_k127_5765462_3	452662.SJA_C2-00890	2.574e-196	622.0	COG1228@1|root,COG1228@2|Bacteria,1MVAF@1224|Proteobacteria,2U3G1@28211|Alphaproteobacteria,2K3ZD@204457|Sphingomonadales	204457|Sphingomonadales	Q	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1,Amidohydro_3
SRD3_k127_5767239_0	1408418.JNJH01000042_gene705	3.025e-123	400.0	COG0393@1|root,COG0393@2|Bacteria,1R559@1224|Proteobacteria	1224|Proteobacteria	S	Belongs to the UPF0145 family	-	-	-	-	-	-	-	-	-	-	-	-	YbjQ_1
SRD3_k127_5767239_2	1408418.JNJH01000042_gene706	9.016e-86	294.0	COG0393@1|root,COG0393@2|Bacteria,1RJVU@1224|Proteobacteria	1224|Proteobacteria	S	Putative heavy-metal-binding	-	-	-	-	-	-	-	-	-	-	-	-	YbjQ_1
SRD3_k127_5767239_1	627192.SLG_00660	3.876e-118	380.0	COG0479@1|root,COG0479@2|Bacteria,1MVHS@1224|Proteobacteria,2TQYF@28211|Alphaproteobacteria,2K0CN@204457|Sphingomonadales	204457|Sphingomonadales	C	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family	sdhB	-	1.3.5.1,1.3.5.4	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2_3,Fer4_17
SRD3_k127_5793953_0	366602.Caul_0211	2.687e-294	908.0	COG0753@1|root,COG0753@2|Bacteria,1MUXZ@1224|Proteobacteria,2TSG9@28211|Alphaproteobacteria,2KF34@204458|Caulobacterales	204458|Caulobacterales	C	Serves to protect cells from the toxic effects of hydrogen peroxide	-	-	1.11.1.6	ko:K03781	ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014	M00532	R00009,R00602,R02670	RC00034,RC00767,RC02141,RC02755	ko00000,ko00001,ko00002,ko01000	-	-	-	Catalase,Catalase-rel
SRD3_k127_5793953_5	555793.WSK_3408	2.507e-37	146.0	2AI16@1|root,318ET@2|Bacteria,1Q09D@1224|Proteobacteria,2VDV8@28211|Alphaproteobacteria,2K65W@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5793953_4	1121123.AUAO01000001_gene769	6.508e-52	203.0	COG4254@1|root,COG4254@2|Bacteria,1N739@1224|Proteobacteria,2UFJF@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	FecR protein	-	-	-	-	-	-	-	-	-	-	-	-	FecR
SRD3_k127_5793953_2	1112214.AHIS01000095_gene852	4.662e-180	576.0	COG3773@1|root,COG3773@2|Bacteria,1RE11@1224|Proteobacteria,2U89A@28211|Alphaproteobacteria,2K11T@204457|Sphingomonadales	204457|Sphingomonadales	M	Cell Wall Hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_2
SRD3_k127_5793953_1	1007104.SUS17_1152	2.432e-183	575.0	COG0031@1|root,COG0031@2|Bacteria,1MUBE@1224|Proteobacteria,2TS33@28211|Alphaproteobacteria,2K2A3@204457|Sphingomonadales	204457|Sphingomonadales	E	Belongs to the cysteine synthase cystathionine beta- synthase family	cysK	-	2.5.1.47	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	M00021	R00897,R03601,R04859	RC00020,RC02814,RC02821	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
SRD3_k127_5793953_3	1112212.JH584235_gene3828	9.385e-115	372.0	COG0477@1|root,COG2814@2|Bacteria,1QTX0@1224|Proteobacteria,2TUM5@28211|Alphaproteobacteria,2K1MY@204457|Sphingomonadales	204457|Sphingomonadales	EGP	COG0477 Permeases of the major facilitator superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,MFS_3
SRD3_k127_5868008_3	1549858.MC45_13385	5.435e-101	335.0	COG3963@1|root,COG3963@2|Bacteria,1R81B@1224|Proteobacteria,2U46R@28211|Alphaproteobacteria,2K2HK@204457|Sphingomonadales	204457|Sphingomonadales	I	Methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25
SRD3_k127_5868008_0	1112214.AHIS01000046_gene2308	1.324e-210	660.0	COG1502@1|root,COG1502@2|Bacteria,1MWUW@1224|Proteobacteria,2U2TG@28211|Alphaproteobacteria,2K02V@204457|Sphingomonadales	204457|Sphingomonadales	I	COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes	-	-	-	ko:K06131	ko00564,ko01100,map00564,map01100	-	R07390	RC00017	ko00000,ko00001,ko01000	-	-	-	PLDc_2
SRD3_k127_5868008_4	1081640.AGFU01000002_gene441	2.244e-59	207.0	COG1758@1|root,COG1758@2|Bacteria,1N6TX@1224|Proteobacteria,2U9BQ@28211|Alphaproteobacteria,2K5I6@204457|Sphingomonadales	204457|Sphingomonadales	K	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits	rpoZ	-	2.7.7.6	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	RNA_pol_Rpb6
SRD3_k127_5868008_2	1112214.AHIS01000046_gene2305	7.513e-117	383.0	COG0293@1|root,COG0293@2|Bacteria,1MW1C@1224|Proteobacteria,2TSBW@28211|Alphaproteobacteria,2K02A@204457|Sphingomonadales	204457|Sphingomonadales	J	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit	ftsJ	-	2.1.1.166	ko:K02427	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	FtsJ
SRD3_k127_5868008_1	1549858.MC45_13360	4.06e-173	551.0	COG0248@1|root,COG0248@2|Bacteria,1MV35@1224|Proteobacteria,2TT2C@28211|Alphaproteobacteria,2K1HK@204457|Sphingomonadales	204457|Sphingomonadales	FP	exopolyphosphatase	-	-	3.6.1.11,3.6.1.40	ko:K01524	ko00230,map00230	-	R03409	RC00002	ko00000,ko00001,ko01000	-	-	-	Ppx-GppA
SRD3_k127_5879124_1	1121124.JNIX01000009_gene2943	7.989e-210	657.0	COG0620@1|root,COG0620@2|Bacteria,1MUI9@1224|Proteobacteria,2TTWK@28211|Alphaproteobacteria	28211|Alphaproteobacteria	E	Methionine synthase	-	-	2.1.1.14	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	M00017	R04405,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	Meth_synt_2
SRD3_k127_5879124_0	627192.SLG_27910	1.195e-244	775.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,2JZVD@204457|Sphingomonadales	204457|Sphingomonadales	C	belongs to the aldehyde dehydrogenase family	-	-	-	-	-	-	-	-	-	-	-	-	Aldedh
SRD3_k127_5879124_3	1192759.AKIB01000017_gene1787	2.695e-38	164.0	COG1846@1|root,COG1846@2|Bacteria,1Q581@1224|Proteobacteria,2UGCH@28211|Alphaproteobacteria,2K61T@204457|Sphingomonadales	204457|Sphingomonadales	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR_2
SRD3_k127_5879124_2	1192759.AKIB01000017_gene1786	2.396e-128	414.0	COG0045@1|root,COG1042@1|root,COG0045@2|Bacteria,COG1042@2|Bacteria,1MW98@1224|Proteobacteria,2TR24@28211|Alphaproteobacteria,2K9SN@204457|Sphingomonadales	204457|Sphingomonadales	C	CoA binding domain	-	-	-	-	-	-	-	-	-	-	-	-	ATP-grasp_5,CoA_binding_2,Succ_CoA_lig
SRD3_k127_589502_5	1112214.AHIS01000079_gene3421	2.597e-39	154.0	2BQEA@1|root,32J9N@2|Bacteria,1NWAP@1224|Proteobacteria,2USC7@28211|Alphaproteobacteria,2K6GA@204457|Sphingomonadales	204457|Sphingomonadales	S	Regulator of ribonuclease activity B	-	-	-	ko:K09893	-	-	-	-	ko00000,ko03019	-	-	-	RraB
SRD3_k127_589502_0	1112212.JH584235_gene3676	0.0	1988.0	COG0458@1|root,COG0458@2|Bacteria,1MUDZ@1224|Proteobacteria,2TQZU@28211|Alphaproteobacteria,2JZX4@204457|Sphingomonadales	204457|Sphingomonadales	F	Belongs to the CarB family	carB	-	6.3.5.5	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R00256,R00575,R01395,R10948,R10949	RC00002,RC00010,RC00043,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000	-	-	-	CPSase_L_D2,CPSase_L_D3,MGS
SRD3_k127_589502_2	1112212.JH584235_gene3677	8.131e-92	303.0	COG0782@1|root,COG0782@2|Bacteria,1RCXW@1224|Proteobacteria,2U5JU@28211|Alphaproteobacteria,2K439@204457|Sphingomonadales	204457|Sphingomonadales	K	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides	greA	-	-	ko:K03624	-	-	-	-	ko00000,ko03021	-	-	-	GreA_GreB,GreA_GreB_N
SRD3_k127_589502_3	1379701.JPJC01000116_gene635	2.965e-69	241.0	COG0705@1|root,COG0705@2|Bacteria,1MYFP@1224|Proteobacteria,2TSJG@28211|Alphaproteobacteria,2K57C@204457|Sphingomonadales	204457|Sphingomonadales	S	membrane protein (homolog of Drosophila rhomboid)	-	-	-	-	-	-	-	-	-	-	-	-	Rhomboid
SRD3_k127_589502_6	1090319.KE386571_gene1720	6.513e-37	140.0	COG0483@1|root,COG0483@2|Bacteria,1N7D7@1224|Proteobacteria,2UF6T@28211|Alphaproteobacteria,2K5WG@204457|Sphingomonadales	204457|Sphingomonadales	G	Domain of unknown function (DUF4170)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4170
SRD3_k127_589502_7	1112212.JH584235_gene3679	7.321e-34	136.0	28M97@1|root,2ZAN6@2|Bacteria,1P8DS@1224|Proteobacteria,2UXPS@28211|Alphaproteobacteria,2K5VF@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_589502_8	1123269.NX02_15400	3.57e-17	86.0	2A39H@1|root,30RRF@2|Bacteria,1Q8A5@1224|Proteobacteria,2VEG7@28211|Alphaproteobacteria,2K7TK@204457|Sphingomonadales	204457|Sphingomonadales	S	Putative Actinobacterial Holin-X, holin superfamily III	-	-	-	-	-	-	-	-	-	-	-	-	Phage_holin_3_6
SRD3_k127_589502_4	1112212.JH584235_gene3681	2.235e-48	180.0	2EJM3@1|root,33DC0@2|Bacteria,1NFBE@1224|Proteobacteria,2UH3B@28211|Alphaproteobacteria,2KE6K@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_589502_1	1219049.SP5_068_00640	1.631e-210	657.0	COG0148@1|root,COG0148@2|Bacteria,1MU1N@1224|Proteobacteria,2TR04@28211|Alphaproteobacteria,2K00W@204457|Sphingomonadales	204457|Sphingomonadales	G	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis	eno	-	4.2.1.11	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	M00001,M00002,M00003,M00346,M00394	R00658	RC00349	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	-	-	-	Enolase_C,Enolase_N
SRD3_k127_5896050_4	1112216.JH594425_gene1132	2.24e-140	448.0	COG0462@1|root,COG0462@2|Bacteria,1MW21@1224|Proteobacteria,2TR4Y@28211|Alphaproteobacteria,2K0MQ@204457|Sphingomonadales	204457|Sphingomonadales	F	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)	prs	-	2.7.6.1	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	M00005	R01049	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	Pribosyl_synth,Pribosyltran_N
SRD3_k127_5896050_6	1112212.JH584235_gene2422	1.179e-122	400.0	COG0730@1|root,COG0730@2|Bacteria,1MVY3@1224|Proteobacteria,2TU6M@28211|Alphaproteobacteria,2K202@204457|Sphingomonadales	204457|Sphingomonadales	S	membrane transporter protein	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
SRD3_k127_5896050_7	1007104.SUS17_2050	6.449e-94	310.0	COG3000@1|root,COG3000@2|Bacteria,1MYGK@1224|Proteobacteria,2UAP4@28211|Alphaproteobacteria,2KCDZ@204457|Sphingomonadales	204457|Sphingomonadales	I	Fatty acid hydroxylase superfamily	crtZ	-	1.14.15.24	ko:K15746	ko00906,ko01100,ko01110,map00906,map01100,map01110	M00372	R07530,R07558,R07559,R07561,R07562,R07568,R07569,R07570,R07572,R07851,R09747	RC00478,RC00704,RC02629	ko00000,ko00001,ko00002,ko01000	-	-	-	FA_hydroxylase
SRD3_k127_5896050_8	1449076.JOOE01000003_gene3698	2.375e-25	108.0	297IB@1|root,2ZURJ@2|Bacteria,1NA2F@1224|Proteobacteria,2UH54@28211|Alphaproteobacteria,2K6A7@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5896050_0	1112216.JH594425_gene1130	1.297e-229	714.0	COG0045@1|root,COG0045@2|Bacteria,1MVCE@1224|Proteobacteria,2TRXK@28211|Alphaproteobacteria,2K12N@204457|Sphingomonadales	204457|Sphingomonadales	C	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit	sucC	-	6.2.1.5	ko:K01903	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00173,M00374,M00620	R00405,R02404	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	-	ATP-grasp_2,Ligase_CoA
SRD3_k127_5896050_5	1112212.JH584235_gene2418	3.033e-130	419.0	COG2086@1|root,COG2086@2|Bacteria,1MVH6@1224|Proteobacteria,2TR4J@28211|Alphaproteobacteria,2K0GH@204457|Sphingomonadales	204457|Sphingomonadales	C	Electron transfer flavoprotein	-	-	-	ko:K03521	-	-	-	-	ko00000	-	-	-	ETF
SRD3_k127_5896050_2	1379701.JPJC01000128_gene2580	2.363e-164	526.0	COG2025@1|root,COG2025@2|Bacteria,1MUFI@1224|Proteobacteria,2TR10@28211|Alphaproteobacteria,2K1AU@204457|Sphingomonadales	204457|Sphingomonadales	C	Electron transfer flavoprotein	etfA	-	-	ko:K03522	-	-	-	-	ko00000,ko04147	-	-	-	ETF,ETF_alpha
SRD3_k127_5896050_1	1112214.AHIS01000047_gene2005	7.4e-167	537.0	COG0123@1|root,COG0123@2|Bacteria,1MU7P@1224|Proteobacteria,2TRRH@28211|Alphaproteobacteria,2K0SH@204457|Sphingomonadales	204457|Sphingomonadales	BQ	Histone deacetylase domain	-	-	-	-	-	-	-	-	-	-	-	-	Hist_deacetyl
SRD3_k127_5896050_3	1112214.AHIS01000047_gene2006	8.994e-162	518.0	COG3004@1|root,COG3004@2|Bacteria,1MW15@1224|Proteobacteria,2TSI5@28211|Alphaproteobacteria,2K097@204457|Sphingomonadales	204457|Sphingomonadales	P	) H( ) antiporter that extrudes sodium in exchange for external protons	nhaA	-	-	ko:K03313	-	-	-	-	ko00000,ko02000	2.A.33.1	-	-	Na_H_antiport_1
SRD3_k127_5896873_0	1502852.FG94_03206	9.293e-175	561.0	COG2433@1|root,COG2433@2|Bacteria,1RJ1Q@1224|Proteobacteria,2VKSJ@28216|Betaproteobacteria,475T0@75682|Oxalobacteraceae	28216|Betaproteobacteria	S	Transposase C of IS166 homeodomain	-	-	-	ko:K07484	-	-	-	-	ko00000	-	-	-	DDE_Tnp_IS66,DDE_Tnp_IS66_C,LZ_Tnp_IS66,zf-IS66
SRD3_k127_5896873_1	1504672.669787677	1.439e-48	175.0	COG3436@1|root,COG3436@2|Bacteria,1RHDW@1224|Proteobacteria,2VSH9@28216|Betaproteobacteria,4AHT7@80864|Comamonadaceae	28216|Betaproteobacteria	L	IS66 Orf2 like protein	-	-	-	ko:K07484	-	-	-	-	ko00000	-	-	-	TnpB_IS66
SRD3_k127_5896873_2	648757.Rvan_2673	3.218e-20	94.0	COG2963@1|root,COG2963@2|Bacteria,1RKI9@1224|Proteobacteria,2UDYB@28211|Alphaproteobacteria	28211|Alphaproteobacteria	L	PFAM transposase IS3 IS911 family protein	-	-	-	ko:K07483	-	-	-	-	ko00000	-	-	-	HTH_Tnp_1
SRD3_k127_5903834_5	1081640.AGFU01000124_gene57	2.43e-88	294.0	COG3384@1|root,COG3384@2|Bacteria,1MXJZ@1224|Proteobacteria,2TRJT@28211|Alphaproteobacteria,2K0K2@204457|Sphingomonadales	204457|Sphingomonadales	S	dioxygenase	-	-	-	-	-	-	-	-	-	-	-	-	LigB
SRD3_k127_5903834_4	1112212.JH584235_gene403	9.929e-95	314.0	COG2080@1|root,COG2080@2|Bacteria,1RD8C@1224|Proteobacteria,2TVRA@28211|Alphaproteobacteria,2K405@204457|Sphingomonadales	204457|Sphingomonadales	C	aerobic-type carbon monoxide dehydrogenase, small subunit CoxS	-	-	1.3.99.16	ko:K07302	-	-	-	-	ko00000,ko01000	-	-	-	Fer2,Fer2_2
SRD3_k127_5903834_6	1112216.JH594425_gene2698	7.468e-55	206.0	COG5455@1|root,COG5455@2|Bacteria,1RJVB@1224|Proteobacteria,2U9H6@28211|Alphaproteobacteria,2K5B9@204457|Sphingomonadales	204457|Sphingomonadales	S	Nickel/cobalt transporter regulator	-	-	-	-	-	-	-	-	-	-	-	-	RcnB
SRD3_k127_5903834_3	1007104.SUS17_2654	6.91e-107	351.0	COG3751@1|root,COG3751@2|Bacteria,1NG7K@1224|Proteobacteria,2U773@28211|Alphaproteobacteria,2K1IN@204457|Sphingomonadales	204457|Sphingomonadales	O	Prolyl 4-hydroxylase alpha subunit homologues.	-	-	1.14.11.2	ko:K00472	ko00330,ko01100,map00330,map01100	-	R01252	RC00478	ko00000,ko00001,ko01000	-	-	-	2OG-FeII_Oxy_3
SRD3_k127_5903834_2	1112212.JH584235_gene1480	8.953e-147	477.0	COG1819@1|root,COG1819@2|Bacteria,1MVI7@1224|Proteobacteria,2TU9H@28211|Alphaproteobacteria,2K1YV@204457|Sphingomonadales	204457|Sphingomonadales	CG	PFAM glycosyl transferase, family 28	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_28,UDPGT
SRD3_k127_5903834_7	627192.SLG_32060	2.146e-12	70.0	COG3609@1|root,COG3609@2|Bacteria,1NH8E@1224|Proteobacteria,2UKDA@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH	-	-	-	ko:K07746	-	-	-	-	ko00000,ko02048	-	-	-	ParD_antitoxin
SRD3_k127_5903834_0	745310.G432_13025	0.0	1135.0	COG1629@1|root,COG4771@2|Bacteria,1MWKN@1224|Proteobacteria,2U10R@28211|Alphaproteobacteria,2K0G1@204457|Sphingomonadales	204457|Sphingomonadales	P	receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SRD3_k127_5903834_1	1112212.JH584235_gene399	7.262e-265	830.0	COG0608@1|root,COG0608@2|Bacteria,1MU1M@1224|Proteobacteria,2TRZQ@28211|Alphaproteobacteria,2K0VW@204457|Sphingomonadales	204457|Sphingomonadales	L	single-stranded-DNA-specific exonuclease RecJ	recJ	-	-	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DHH,DHHA1
SRD3_k127_5974280_2	685778.AORL01000015_gene2453	7.146e-170	543.0	COG0659@1|root,COG0659@2|Bacteria,1MWDF@1224|Proteobacteria,2TT0G@28211|Alphaproteobacteria,2K3UQ@204457|Sphingomonadales	204457|Sphingomonadales	P	COG0659 Sulfate permease and related transporters (MFS superfamily)	-	-	-	-	-	-	-	-	-	-	-	-	STAS,Sulfate_transp
SRD3_k127_5974280_1	392499.Swit_5219	2.76e-195	628.0	COG2202@1|root,COG2203@1|root,COG3920@1|root,COG2202@2|Bacteria,COG2203@2|Bacteria,COG3920@2|Bacteria,1NWNJ@1224|Proteobacteria,2TWY0@28211|Alphaproteobacteria,2KEJH@204457|Sphingomonadales	204457|Sphingomonadales	T	HWE histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	GAF,HWE_HK,PAS_3
SRD3_k127_5974280_5	1449049.JONW01000009_gene4563	1.205e-102	338.0	COG2761@1|root,COG2761@2|Bacteria,1NXUB@1224|Proteobacteria,2U1PN@28211|Alphaproteobacteria,2KK1S@204458|Caulobacterales	204458|Caulobacterales	Q	DSBA-like thioredoxin domain	-	-	-	-	-	-	-	-	-	-	-	-	DSBA
SRD3_k127_5974280_0	1007104.SUS17_1285	1.479e-224	704.0	COG1167@1|root,COG1167@2|Bacteria,1MV6F@1224|Proteobacteria,2TQP9@28211|Alphaproteobacteria,2KD1C@204457|Sphingomonadales	204457|Sphingomonadales	K	COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_1_2,GntR
SRD3_k127_5974280_4	1007104.SUS17_1283	4.389e-136	437.0	COG0384@1|root,COG0384@2|Bacteria,1MUAS@1224|Proteobacteria,2U3ND@28211|Alphaproteobacteria,2KD9U@204457|Sphingomonadales	204457|Sphingomonadales	S	phenazine biosynthesis protein	-	-	-	-	-	-	-	-	-	-	-	-	PhzC-PhzF
SRD3_k127_5974280_6	69395.JQLZ01000001_gene3272	1.557e-100	331.0	COG4977@1|root,COG4977@2|Bacteria,1QUTI@1224|Proteobacteria,2U3QH@28211|Alphaproteobacteria,2KF38@204458|Caulobacterales	204458|Caulobacterales	K	DJ-1/PfpI family	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI
SRD3_k127_5974280_3	1545915.JROG01000004_gene1748	1.931e-141	462.0	28MAA@1|root,2ZAP0@2|Bacteria,1R5EZ@1224|Proteobacteria,2U43A@28211|Alphaproteobacteria,2JZVU@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_5974280_8	579138.Zymop_0824	2.923e-25	111.0	COG2963@1|root,COG2963@2|Bacteria,1N24I@1224|Proteobacteria,2UGNR@28211|Alphaproteobacteria,2KB03@204457|Sphingomonadales	204457|Sphingomonadales	L	transposase activity	-	-	-	-	-	-	-	-	-	-	-	-	HTH_23
SRD3_k127_6006452_3	1449076.JOOE01000001_gene2297	2.08e-63	219.0	COG0496@1|root,COG0496@2|Bacteria,1MVHE@1224|Proteobacteria,2TQXZ@28211|Alphaproteobacteria,2K0F4@204457|Sphingomonadales	204457|Sphingomonadales	S	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates	surE	-	3.1.3.5	ko:K03787	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346	RC00017	ko00000,ko00001,ko01000	-	-	-	SurE
SRD3_k127_6006452_2	1112212.JH584235_gene604	3.33e-145	468.0	COG1388@1|root,COG4942@1|root,COG1388@2|Bacteria,COG4942@2|Bacteria,1RD24@1224|Proteobacteria,2U911@28211|Alphaproteobacteria,2KD2U@204457|Sphingomonadales	204457|Sphingomonadales	DM	Lysin motif	-	-	-	-	-	-	-	-	-	-	-	-	LysM,Peptidase_M23
SRD3_k127_6006452_1	1449076.JOOE01000001_gene2711	2.363e-147	488.0	COG5010@1|root,COG5010@2|Bacteria,1NSGE@1224|Proteobacteria,2UP1Y@28211|Alphaproteobacteria,2K29Y@204457|Sphingomonadales	204457|Sphingomonadales	U	COG0457 FOG TPR repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6006452_4	867845.KI911784_gene2277	8.138e-44	173.0	COG0457@1|root,COG1404@1|root,COG3055@1|root,COG0457@2|Bacteria,COG1404@2|Bacteria,COG3055@2|Bacteria,2G8UU@200795|Chloroflexi,3759F@32061|Chloroflexia	32061|Chloroflexia	O	PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin	-	-	-	-	-	-	-	-	-	-	-	-	Kelch_4,Kelch_5,Peptidase_S8
SRD3_k127_6006452_0	1112216.JH594425_gene2802	1.485e-218	685.0	COG0162@1|root,COG0162@2|Bacteria,1MVUQ@1224|Proteobacteria,2TQPA@28211|Alphaproteobacteria,2K11C@204457|Sphingomonadales	204457|Sphingomonadales	J	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)	tyrS	-	6.1.1.1	ko:K01866	ko00970,map00970	M00359,M00360	R02918	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	S4,tRNA-synt_1b
SRD3_k127_6006452_5	1112214.AHIS01000040_gene1900	6.382e-17	83.0	2AR52@1|root,31GEP@2|Bacteria,1NVPI@1224|Proteobacteria,2US2C@28211|Alphaproteobacteria,2K6US@204457|Sphingomonadales	204457|Sphingomonadales	S	PilZ domain	-	-	-	-	-	-	-	-	-	-	-	-	PilZ
SRD3_k127_6096238_2	1112214.AHIS01000061_gene2796	2.839e-43	162.0	COG5389@1|root,COG5389@2|Bacteria,1N82D@1224|Proteobacteria,2UFA9@28211|Alphaproteobacteria,2K4U1@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF721)	-	-	-	-	-	-	-	-	-	-	-	-	DUF721
SRD3_k127_6096238_0	1112212.JH584235_gene1809	3.466e-162	519.0	COG1194@1|root,COG1194@2|Bacteria,1MUD4@1224|Proteobacteria,2TQVX@28211|Alphaproteobacteria,2K0ZZ@204457|Sphingomonadales	204457|Sphingomonadales	L	glycosylase	mutY	-	-	ko:K03575	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	EndIII_4Fe-2S,HhH-GPD,NUDIX_4
SRD3_k127_6096238_1	1120705.FG95_01444	6.737e-62	221.0	COG1680@1|root,COG1680@2|Bacteria,1MVPR@1224|Proteobacteria,2TS9A@28211|Alphaproteobacteria,2K18D@204457|Sphingomonadales	204457|Sphingomonadales	V	COG1680 Beta-lactamase class C and other penicillin binding proteins	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SRD3_k127_6112780_4	1112214.AHIS01000022_gene1306	1.202e-180	569.0	COG1420@1|root,COG1420@2|Bacteria,1MVX4@1224|Proteobacteria,2TRUF@28211|Alphaproteobacteria,2K03N@204457|Sphingomonadales	204457|Sphingomonadales	K	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons	hrcA	-	-	ko:K03705	-	-	-	-	ko00000,ko03000	-	-	-	HrcA,HrcA_DNA-bdg
SRD3_k127_6112780_9	1112212.JH584235_gene3454	2.33e-141	450.0	COG0689@1|root,COG0689@2|Bacteria,1MVFZ@1224|Proteobacteria,2TRMC@28211|Alphaproteobacteria,2K0PW@204457|Sphingomonadales	204457|Sphingomonadales	J	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates	rph	-	2.7.7.56	ko:K00989	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	RNase_PH,RNase_PH_C
SRD3_k127_6112780_10	1449076.JOOE01000004_gene396	3.158e-98	325.0	COG0127@1|root,COG0127@2|Bacteria,1MUK5@1224|Proteobacteria,2TV4B@28211|Alphaproteobacteria,2K1NS@204457|Sphingomonadales	204457|Sphingomonadales	F	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions	rdgB	-	3.6.1.66	ko:K02428	ko00230,map00230	-	R00426,R00720,R01855,R02100,R02720,R03531	RC00002	ko00000,ko00001,ko01000	-	-	-	Ham1p_like
SRD3_k127_6112780_16	1470591.BW41_02158	1.34e-63	224.0	COG2340@1|root,COG2340@2|Bacteria,1N9SZ@1224|Proteobacteria,2UTM1@28211|Alphaproteobacteria,2K4A7@204457|Sphingomonadales	204457|Sphingomonadales	S	SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains.	-	-	-	-	-	-	-	-	-	-	-	-	CAP
SRD3_k127_6112780_2	1112214.AHIS01000021_gene1164	4.86e-194	618.0	COG0635@1|root,COG0635@2|Bacteria,1MU76@1224|Proteobacteria,2TT63@28211|Alphaproteobacteria,2K09I@204457|Sphingomonadales	204457|Sphingomonadales	H	Involved in the biosynthesis of porphyrin-containing compound	-	-	-	-	-	-	-	-	-	-	-	-	HemN_C,Radical_SAM
SRD3_k127_6112780_6	1112212.JH584235_gene1447	1.145e-174	558.0	COG0683@1|root,COG0683@2|Bacteria,1QURG@1224|Proteobacteria,2TS62@28211|Alphaproteobacteria,2K08C@204457|Sphingomonadales	204457|Sphingomonadales	E	Extracellular ligand-binding receptor	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SRD3_k127_6112780_7	1112216.JH594425_gene2264	6.438e-146	465.0	COG0313@1|root,COG0313@2|Bacteria,1MU0E@1224|Proteobacteria,2TR14@28211|Alphaproteobacteria,2K0AW@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA	rsmI	-	2.1.1.198	ko:K07056	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	TP_methylase
SRD3_k127_6112780_17	1007104.SUS17_2893	1.434e-60	210.0	COG0792@1|root,COG0792@2|Bacteria,1N6VN@1224|Proteobacteria,2UFTM@28211|Alphaproteobacteria,2K62R@204457|Sphingomonadales	204457|Sphingomonadales	L	Belongs to the UPF0102 family	-	-	-	ko:K07460	-	-	-	-	ko00000	-	-	-	UPF0102
SRD3_k127_6112780_3	1379701.JPJC01000252_gene1899	1.872e-181	571.0	COG0189@1|root,COG0189@2|Bacteria,1MVUA@1224|Proteobacteria,2TQNE@28211|Alphaproteobacteria,2K0JQ@204457|Sphingomonadales	204457|Sphingomonadales	H	Belongs to the prokaryotic GSH synthase family	gshB	-	6.3.2.3	ko:K01920	ko00270,ko00480,ko01100,map00270,map00480,map01100	M00118	R00497,R10994	RC00096,RC00141	ko00000,ko00001,ko00002,ko01000	-	-	-	GSH-S_ATP,GSH-S_N
SRD3_k127_6112780_12	1007104.SUS17_2936	8.235e-94	311.0	COG0586@1|root,COG0586@2|Bacteria,1MX4M@1224|Proteobacteria,2U6ZF@28211|Alphaproteobacteria,2K1Q0@204457|Sphingomonadales	204457|Sphingomonadales	S	membrane-associated protein	-	-	-	-	-	-	-	-	-	-	-	-	SNARE_assoc
SRD3_k127_6112780_19	1449048.JQKU01000024_gene4004	4.836e-28	117.0	COG2105@1|root,COG2105@2|Bacteria,2IC9E@201174|Actinobacteria,23A2K@1762|Mycobacteriaceae	201174|Actinobacteria	S	Gamma-glutamyl cyclotransferase, AIG2-like	-	-	-	-	-	-	-	-	-	-	-	-	GGACT,Lipase_GDSL_2
SRD3_k127_6112780_15	391937.NA2_14652	1.202e-68	238.0	COG0454@1|root,COG0456@2|Bacteria,1MZA6@1224|Proteobacteria,2UCC0@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10
SRD3_k127_6112780_11	107636.JQNK01000009_gene1768	4.206e-95	317.0	COG0625@1|root,COG0625@2|Bacteria,1PA0Q@1224|Proteobacteria,2U1TW@28211|Alphaproteobacteria	28211|Alphaproteobacteria	O	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C_2,GST_N,GST_N_3
SRD3_k127_6112780_8	1112212.JH584235_gene1453	3.362e-142	455.0	COG4974@1|root,COG4974@2|Bacteria,1QU6A@1224|Proteobacteria,2TS7W@28211|Alphaproteobacteria,2K1R3@204457|Sphingomonadales	204457|Sphingomonadales	L	Belongs to the 'phage' integrase family	xerC_2	-	-	ko:K03733	-	-	-	-	ko00000,ko03036	-	-	-	Phage_int_SAM_1,Phage_integrase
SRD3_k127_6112780_18	69395.JQLZ01000006_gene2376	4.207e-33	133.0	COG5649@1|root,COG5649@2|Bacteria	2|Bacteria	E	Domain of unknown function (DU1801)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801
SRD3_k127_6112780_0	1112216.JH594425_gene2258	0.0	1272.0	COG1198@1|root,COG1198@2|Bacteria,1MUUZ@1224|Proteobacteria,2TQTQ@28211|Alphaproteobacteria,2K0DV@204457|Sphingomonadales	204457|Sphingomonadales	L	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA	priA	-	-	ko:K04066	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,Helicase_C
SRD3_k127_6112780_1	1112212.JH584235_gene1457	1.876e-212	675.0	COG0265@1|root,COG0265@2|Bacteria,1NG0M@1224|Proteobacteria,2UIGB@28211|Alphaproteobacteria,2K01B@204457|Sphingomonadales	204457|Sphingomonadales	O	Trypsin-like peptidase domain	-	-	-	-	-	-	-	-	-	-	-	-	Trypsin_2
SRD3_k127_6112780_13	1112216.JH594425_gene2250	7.442e-93	313.0	COG1266@1|root,COG1266@2|Bacteria,1RJQW@1224|Proteobacteria,2UB06@28211|Alphaproteobacteria,2K5HR@204457|Sphingomonadales	204457|Sphingomonadales	S	CAAX protease self-immunity	-	-	-	ko:K07052	-	-	-	-	ko00000	-	-	-	Abi
SRD3_k127_6112780_14	1112214.AHIS01000019_gene1227	3.056e-71	244.0	2CVTP@1|root,32SY9@2|Bacteria,1N209@1224|Proteobacteria,2UC8J@28211|Alphaproteobacteria,2K5GB@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF1203)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1203
SRD3_k127_6112780_5	1112216.JH594425_gene2249	2.654e-180	567.0	COG0350@1|root,COG2169@1|root,COG0350@2|Bacteria,COG2169@2|Bacteria,1N2YQ@1224|Proteobacteria,2TQRX@28211|Alphaproteobacteria,2K165@204457|Sphingomonadales	204457|Sphingomonadales	FL	Metal binding domain of Ada	ada	-	2.1.1.63	ko:K10778	-	-	-	-	ko00000,ko01000,ko03000,ko03400	-	-	-	Ada_Zn_binding,DNA_binding_1,HTH_18,Methyltransf_1N
SRD3_k127_6113218_14	1537715.JQFJ01000002_gene1572	1.272e-16	79.0	COG0678@1|root,COG0678@2|Bacteria,1MU0H@1224|Proteobacteria,2U6ZN@28211|Alphaproteobacteria,2K3WE@204457|Sphingomonadales	204457|Sphingomonadales	O	Alkyl hydroperoxide reductase	-	-	-	-	-	-	-	-	-	-	-	-	Redoxin
SRD3_k127_6113218_16	1112212.JH584235_gene633	7.545e-09	59.0	2AB54@1|root,310J8@2|Bacteria,1PNJA@1224|Proteobacteria,2V152@28211|Alphaproteobacteria,2KB4Z@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6113218_2	1112214.AHIS01000070_gene3150	4.264e-279	861.0	COG0775@1|root,COG0775@2|Bacteria,1MUMQ@1224|Proteobacteria,2TSX1@28211|Alphaproteobacteria,2K1YS@204457|Sphingomonadales	204457|Sphingomonadales	F	Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations	amn	-	3.2.2.4	ko:K01241	ko00230,map00230	-	R00182	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	AMNp_N,PNP_UDP_1
SRD3_k127_6113218_15	1112214.AHIS01000070_gene3149	3.851e-16	83.0	2ANDZ@1|root,31DCK@2|Bacteria,1QAIQ@1224|Proteobacteria,2VE5P@28211|Alphaproteobacteria,2K70J@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6113218_1	1112212.JH584235_gene636	0.0	1025.0	COG1164@1|root,COG1164@2|Bacteria,1MWYN@1224|Proteobacteria,2TR6R@28211|Alphaproteobacteria,2K13P@204457|Sphingomonadales	204457|Sphingomonadales	E	Angiotensin-converting enzyme	-	-	3.4.15.1	ko:K01283	ko04614,ko04924,ko05142,ko05410,map04614,map04924,map05142,map05410	-	-	-	ko00000,ko00001,ko01000,ko01002,ko04090,ko04147	-	-	-	Peptidase_M2
SRD3_k127_6113218_8	1090319.KE386571_gene1259	3.337e-112	366.0	COG2267@1|root,COG2267@2|Bacteria,1QUNU@1224|Proteobacteria,2TW29@28211|Alphaproteobacteria,2K09G@204457|Sphingomonadales	204457|Sphingomonadales	I	hydrolases or acyltransferases (alpha beta hydrolase superfamily)	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6
SRD3_k127_6113218_9	392499.Swit_2665	6.88e-76	256.0	COG3791@1|root,COG3791@2|Bacteria,1RE8S@1224|Proteobacteria,2U73V@28211|Alphaproteobacteria,2K4NT@204457|Sphingomonadales	204457|Sphingomonadales	S	Glutathione-dependent formaldehyde-activating enzyme	-	-	-	-	-	-	-	-	-	-	-	-	GFA
SRD3_k127_6113218_13	1449076.JOOE01000002_gene877	1.165e-48	178.0	COG1846@1|root,COG1846@2|Bacteria,1MZY5@1224|Proteobacteria,2U9EE@28211|Alphaproteobacteria,2K62J@204457|Sphingomonadales	204457|Sphingomonadales	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SRD3_k127_6113218_6	1112212.JH584235_gene1636	2.406e-145	469.0	COG1566@1|root,COG1566@2|Bacteria,1MU7I@1224|Proteobacteria,2TS39@28211|Alphaproteobacteria,2K1WC@204457|Sphingomonadales	204457|Sphingomonadales	V	Secretion protein, HlyD	-	-	-	ko:K03543	-	M00701	-	-	ko00000,ko00002,ko02000	8.A.1.1	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
SRD3_k127_6113218_5	1449076.JOOE01000002_gene879	1.312e-198	631.0	COG0477@1|root,COG2814@2|Bacteria,1MU1I@1224|Proteobacteria,2TVXT@28211|Alphaproteobacteria,2JZYF@204457|Sphingomonadales	204457|Sphingomonadales	EGP	Major facilitator superfamily	-	-	-	ko:K03446	-	M00701	-	-	ko00000,ko00002,ko02000	2.A.1.3	-	-	MFS_1
SRD3_k127_6113218_12	685778.AORL01000021_gene433	3.798e-51	187.0	COG3791@1|root,COG3791@2|Bacteria,1N0W7@1224|Proteobacteria,2VAN9@28211|Alphaproteobacteria,2K7PR@204457|Sphingomonadales	204457|Sphingomonadales	S	Glutathione-dependent formaldehyde-activating enzyme	-	-	-	-	-	-	-	-	-	-	-	-	GFA
SRD3_k127_6113218_10	1041147.AUFB01000003_gene3638	5.488e-71	243.0	2AT74@1|root,332CX@2|Bacteria,1RI44@1224|Proteobacteria,2UFHV@28211|Alphaproteobacteria,4BIWZ@82115|Rhizobiaceae	28211|Alphaproteobacteria	S	RES domain	-	-	-	-	-	-	-	-	-	-	-	-	RES
SRD3_k127_6113218_4	1449076.JOOE01000002_gene880	1.301e-206	645.0	COG0136@1|root,COG0136@2|Bacteria,1MUHG@1224|Proteobacteria,2TSRD@28211|Alphaproteobacteria,2K104@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate	asd	-	1.2.1.11	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R02291	RC00684	ko00000,ko00001,ko00002,ko01000	-	-	-	Semialdhyde_dh,Semialdhyde_dhC
SRD3_k127_6113218_0	1112212.JH584235_gene642	0.0	1209.0	COG1506@1|root,COG1506@2|Bacteria,1P6E1@1224|Proteobacteria,2TRVE@28211|Alphaproteobacteria,2K0U1@204457|Sphingomonadales	204457|Sphingomonadales	E	peptidase S9	-	-	3.4.14.5	ko:K01278	ko04974,map04974	-	-	-	ko00000,ko00001,ko01000,ko01002,ko04090,ko04147	-	-	-	DPPIV_N,Peptidase_S9
SRD3_k127_6113218_3	1144310.PMI07_005690	7.445e-245	784.0	COG2132@1|root,COG2132@2|Bacteria,1MU0J@1224|Proteobacteria,2U19S@28211|Alphaproteobacteria,4BDIW@82115|Rhizobiaceae	28211|Alphaproteobacteria	Q	Multicopper oxidase	-	-	-	-	-	-	-	-	-	-	-	-	Cu-oxidase,Cu-oxidase_2,Cu-oxidase_3
SRD3_k127_6113218_7	1174684.EBMC1_05179	4.24e-120	397.0	COG2885@1|root,COG2885@2|Bacteria,1R5IS@1224|Proteobacteria,2U2V8@28211|Alphaproteobacteria,2K1H8@204457|Sphingomonadales	204457|Sphingomonadales	M	Belongs to the ompA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA
SRD3_k127_6113218_11	1123073.KB899241_gene2644	2.658e-67	250.0	COG2819@1|root,COG2819@2|Bacteria,1R9SG@1224|Proteobacteria,1T1D1@1236|Gammaproteobacteria,1X6IU@135614|Xanthomonadales	135614|Xanthomonadales	S	Putative esterase	-	-	-	ko:K07017	-	-	-	-	ko00000	-	-	-	Esterase
SRD3_k127_611949_5	1005999.GLGR_0344	4.653e-27	113.0	COG0582@1|root,COG0582@2|Bacteria,1MU23@1224|Proteobacteria,1RMJ1@1236|Gammaproteobacteria	1236|Gammaproteobacteria	L	Belongs to the 'phage' integrase family	intB	-	-	-	-	-	-	-	-	-	-	-	Arm-DNA-bind_3,Phage_integrase
SRD3_k127_611949_3	1379701.JPJC01000257_gene1471	5.829e-127	414.0	COG0702@1|root,COG0702@2|Bacteria,1MW54@1224|Proteobacteria,2TQMD@28211|Alphaproteobacteria,2K19R@204457|Sphingomonadales	204457|Sphingomonadales	GM	Dehydrogenase	-	-	1.6.5.3,1.6.99.3	ko:K00329,ko:K00356	ko00190,map00190	-	R11945	RC00061	ko00000,ko00001,ko01000	-	-	-	3Beta_HSD,Epimerase,NAD_binding_10,RmlD_sub_bind
SRD3_k127_611949_2	1112212.JH584235_gene2854	2.547e-130	420.0	COG1968@1|root,COG1968@2|Bacteria,1MX02@1224|Proteobacteria,2TSUR@28211|Alphaproteobacteria,2K0R1@204457|Sphingomonadales	204457|Sphingomonadales	V	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin	uppP	-	3.6.1.27	ko:K06153	ko00550,map00550	-	R05627	RC00002	ko00000,ko00001,ko01000,ko01011	-	-	-	BacA
SRD3_k127_611949_0	1112212.JH584235_gene2853	1.298e-271	840.0	COG0493@1|root,COG0493@2|Bacteria,1MU2H@1224|Proteobacteria,2TSE2@28211|Alphaproteobacteria,2K21U@204457|Sphingomonadales	204457|Sphingomonadales	E	Glutamate synthase	gltD	-	1.4.1.13,1.4.1.14	ko:K00266	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	-	R00093,R00114,R00248	RC00006,RC00010,RC02799	ko00000,ko00001,ko01000	-	-	-	Fer4_20,Pyr_redox_2
SRD3_k127_611949_4	13689.BV96_01100	4.667e-50	191.0	2AG6V@1|root,3107V@2|Bacteria,1MZ2D@1224|Proteobacteria,2TVU5@28211|Alphaproteobacteria,2KE86@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF2059
SRD3_k127_611949_1	1112216.JH594425_gene470	1.418e-170	536.0	COG0067@1|root,COG0069@1|root,COG0070@1|root,COG0067@2|Bacteria,COG0069@2|Bacteria,COG0070@2|Bacteria,1MU7B@1224|Proteobacteria,2TRHQ@28211|Alphaproteobacteria,2K19P@204457|Sphingomonadales	204457|Sphingomonadales	E	Glutamate synthase	gltB	-	1.4.1.13,1.4.1.14	ko:K00265	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	-	R00093,R00114,R00248	RC00006,RC00010,RC02799	ko00000,ko00001,ko01000	-	-	-	GATase_2,GXGXG,Glu_syn_central,Glu_synthase
SRD3_k127_6189591_6	1470591.BW41_01683	9.367e-108	360.0	COG1629@1|root,COG4771@2|Bacteria,1MUWN@1224|Proteobacteria,2TUIR@28211|Alphaproteobacteria,2K0N7@204457|Sphingomonadales	204457|Sphingomonadales	P	Outer membrane protein beta-barrel family	-	-	-	-	-	-	-	-	-	-	-	-	CarbopepD_reg_2,CarboxypepD_reg,Plug,TonB_dep_Rec
SRD3_k127_6189591_20	1296990.H845_3083	0.0008945	50.0	28I4Q@1|root,2Z886@2|Bacteria,1R41F@1224|Proteobacteria,2U637@28211|Alphaproteobacteria,2JWZC@204441|Rhodospirillales	204441|Rhodospirillales	S	Sulfotransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Sulfotransfer_3
SRD3_k127_6189591_11	1449076.JOOE01000003_gene3574	1.171e-51	192.0	COG3279@1|root,COG3279@2|Bacteria,1MUE8@1224|Proteobacteria,2U0M2@28211|Alphaproteobacteria,2K2B0@204457|Sphingomonadales	204457|Sphingomonadales	KT	Response regulator of the LytR AlgR family	-	-	-	-	-	-	-	-	-	-	-	-	LytTR,Response_reg
SRD3_k127_6189591_9	1123269.NX02_23335	1.654e-59	226.0	COG2972@1|root,COG2972@2|Bacteria,1MXVQ@1224|Proteobacteria,2U103@28211|Alphaproteobacteria,2K0W4@204457|Sphingomonadales	204457|Sphingomonadales	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,His_kinase
SRD3_k127_6189591_14	1090318.ATTI01000001_gene2593	1.391e-45	169.0	COG0784@1|root,COG0784@2|Bacteria,1N7PR@1224|Proteobacteria,2UHJG@28211|Alphaproteobacteria,2K5C2@204457|Sphingomonadales	204457|Sphingomonadales	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	HisKA,Response_reg
SRD3_k127_6189591_3	1549858.MC45_08745	8.272e-173	572.0	COG0642@1|root,COG2205@2|Bacteria,1NRP8@1224|Proteobacteria,2TRHH@28211|Alphaproteobacteria,2K2UP@204457|Sphingomonadales	204457|Sphingomonadales	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Hpt,Response_reg,TPR_12
SRD3_k127_6189591_16	1030157.AFMP01000036_gene2621	5.364e-26	116.0	2AKT1@1|root,31BK2@2|Bacteria,1NXBB@1224|Proteobacteria,2UTRK@28211|Alphaproteobacteria,2K5KP@204457|Sphingomonadales	204457|Sphingomonadales	S	PilZ domain	-	-	-	-	-	-	-	-	-	-	-	-	PilZ
SRD3_k127_6189591_7	1449076.JOOE01000002_gene1208	1.632e-101	349.0	COG2200@1|root,COG2200@2|Bacteria,1NT3J@1224|Proteobacteria,2VEZA@28211|Alphaproteobacteria,2KDVS@204457|Sphingomonadales	204457|Sphingomonadales	T	Putative diguanylate phosphodiesterase	-	-	-	-	-	-	-	-	-	-	-	-	EAL
SRD3_k127_6189591_2	1112212.JH584235_gene2613	8.055e-174	565.0	2ADKN@1|root,313BB@2|Bacteria,1NWGU@1224|Proteobacteria,2USIB@28211|Alphaproteobacteria,2K5N0@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	TbpB_B_D
SRD3_k127_6189591_5	1112212.JH584235_gene2612	4.44e-156	506.0	COG3063@1|root,COG3063@2|Bacteria,1NART@1224|Proteobacteria,2UFPG@28211|Alphaproteobacteria,2K2FZ@204457|Sphingomonadales	204457|Sphingomonadales	NU	Protein of unknown function (DUF560)	-	-	-	-	-	-	-	-	-	-	-	-	DUF560,TPR_16
SRD3_k127_6189591_13	1449076.JOOE01000001_gene2777	1.822e-49	184.0	COG4566@1|root,COG4566@2|Bacteria,1NUGD@1224|Proteobacteria,2URNE@28211|Alphaproteobacteria,2KCK2@204457|Sphingomonadales	204457|Sphingomonadales	T	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
SRD3_k127_6189591_0	1219049.SP5_034_00650	0.0	1061.0	COG0457@1|root,COG4676@1|root,COG0457@2|Bacteria,COG4676@2|Bacteria,1QWII@1224|Proteobacteria,2TWY8@28211|Alphaproteobacteria,2K9FF@204457|Sphingomonadales	204457|Sphingomonadales	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6189591_19	1088721.NSU_2217	1.421e-08	61.0	2EFUM@1|root,339KS@2|Bacteria,1NGG6@1224|Proteobacteria,2UJA7@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Domain of unknown function (DUF4169)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4169
SRD3_k127_6189591_4	1219049.SP5_034_00310	7.598e-164	521.0	COG2066@1|root,COG2066@2|Bacteria,1MWB5@1224|Proteobacteria,2TS8X@28211|Alphaproteobacteria,2JZVC@204457|Sphingomonadales	204457|Sphingomonadales	E	Belongs to the glutaminase family	glsA	-	3.5.1.2	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	-	R00256,R01579	RC00010,RC02798	ko00000,ko00001,ko01000	-	-	-	Glutaminase
SRD3_k127_6189591_15	445970.ALIPUT_00866	5.919e-40	153.0	2DMWE@1|root,32UHT@2|Bacteria,4NU0Y@976|Bacteroidetes	976|Bacteroidetes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6189591_10	1121015.N789_10455	1.207e-52	198.0	2906K@1|root,2ZMWD@2|Bacteria,1P9M1@1224|Proteobacteria,1TEVT@1236|Gammaproteobacteria,1XBUZ@135614|Xanthomonadales	135614|Xanthomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6189591_1	1123269.NX02_08125	9.837e-237	738.0	COG4303@1|root,COG4303@2|Bacteria,1MUR4@1224|Proteobacteria,2TTNA@28211|Alphaproteobacteria,2K8WX@204457|Sphingomonadales	204457|Sphingomonadales	E	Ethanolamine ammonia lyase large subunit (EutB)	-	-	4.3.1.7	ko:K03735	ko00564,ko01100,map00564,map01100	-	R00749	RC00370	ko00000,ko00001,ko01000	-	-	-	EutB
SRD3_k127_6189591_8	1123269.NX02_08130	1.503e-92	310.0	COG4302@1|root,COG4302@2|Bacteria,1MWQI@1224|Proteobacteria,2U5EU@28211|Alphaproteobacteria,2KAGF@204457|Sphingomonadales	204457|Sphingomonadales	E	Ethanolamine ammonia-lyase light chain (EutC)	-	-	4.3.1.7	ko:K03736	ko00564,ko01100,map00564,map01100	-	R00749	RC00370	ko00000,ko00001,ko01000	-	-	-	EutC
SRD3_k127_6189591_12	78245.Xaut_4170	9.37e-51	183.0	COG0659@1|root,COG0659@2|Bacteria,1MWDF@1224|Proteobacteria,2TT0G@28211|Alphaproteobacteria,3F0MD@335928|Xanthobacteraceae	28211|Alphaproteobacteria	P	PFAM Sulfate transporter antisigma-factor antagonist STAS	-	-	-	-	-	-	-	-	-	-	-	-	STAS,Sulfate_transp
SRD3_k127_6219944_0	1470591.BW41_00929	4.269e-204	637.0	COG2141@1|root,COG2141@2|Bacteria,1MWMV@1224|Proteobacteria,2VFM8@28211|Alphaproteobacteria,2KDYF@204457|Sphingomonadales	204457|Sphingomonadales	C	Luciferase-like monooxygenase	-	-	1.14.14.35	ko:K17228	ko00920,map00920	-	R10203	RC02556,RC03080	ko00000,ko00001,ko01000	-	-	-	Bac_luciferase
SRD3_k127_6219944_1	1112216.JH594425_gene298	8.389e-167	527.0	COG0189@1|root,COG0189@2|Bacteria,1R5VK@1224|Proteobacteria,2U2DG@28211|Alphaproteobacteria,2K2UA@204457|Sphingomonadales	204457|Sphingomonadales	HJ	COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase)	-	-	-	-	-	-	-	-	-	-	-	-	CPSase_L_D2,RimK
SRD3_k127_6219944_4	1316936.K678_04739	3.14e-54	200.0	COG1352@1|root,COG1352@2|Bacteria,1MU6W@1224|Proteobacteria,2TRQ3@28211|Alphaproteobacteria,2JQEI@204441|Rhodospirillales	204441|Rhodospirillales	NT	COG1352 Methylase of chemotaxis methyl-accepting proteins	-	-	2.1.1.80	ko:K00575	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko01000,ko02035	-	-	-	CheR,CheR_N
SRD3_k127_6219944_6	1470591.BW41_01195	6.323e-12	73.0	2AKMT@1|root,31BE9@2|Bacteria,1P7K5@1224|Proteobacteria,2UWIH@28211|Alphaproteobacteria,2K776@204457|Sphingomonadales	204457|Sphingomonadales	S	PilZ domain	-	-	-	-	-	-	-	-	-	-	-	-	PilZ
SRD3_k127_6219944_3	366602.Caul_3221	1.798e-70	244.0	COG1917@1|root,COG1917@2|Bacteria,1QUVM@1224|Proteobacteria,2VFFI@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	PFAM Aspartyl Asparaginyl beta-hydroxylase	-	-	-	-	-	-	-	-	-	-	-	-	Asp_Arg_Hydrox
SRD3_k127_6219944_2	366602.Caul_3222	5.768e-85	305.0	COG1917@1|root,COG1917@2|Bacteria,1RF0X@1224|Proteobacteria,2UBJ0@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Cupin 2, conserved barrel domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6219944_5	1550073.JROH01000003_gene2432	5.33e-38	146.0	COG0367@1|root,COG0367@2|Bacteria,1MW4E@1224|Proteobacteria,2TSCY@28211|Alphaproteobacteria,2K6H5@204457|Sphingomonadales	204457|Sphingomonadales	E	Glutamine amidotransferase domain	-	-	6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	-	R00578	RC00010	ko00000,ko00001,ko01000,ko01002	-	-	-	Asn_synthase,GATase_7
SRD3_k127_6300603_1	762376.AXYL_00085	2.205e-88	297.0	COG0110@1|root,COG0110@2|Bacteria,1RA2T@1224|Proteobacteria,2VR8A@28216|Betaproteobacteria,3T9CD@506|Alcaligenaceae	28216|Betaproteobacteria	S	Hexapeptide repeat of succinyl-transferase	-	-	2.3.1.79	ko:K00661	-	-	-	-	ko00000,ko01000	-	-	-	Hexapep,Hexapep_2
SRD3_k127_6300603_0	1112214.AHIS01000056_gene2979	1.62e-118	392.0	COG3537@1|root,COG3537@2|Bacteria,1MXCY@1224|Proteobacteria,2U396@28211|Alphaproteobacteria,2K1RC@204457|Sphingomonadales	204457|Sphingomonadales	G	Glycosyl hydrolase family 92	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_92
SRD3_k127_6306799_2	1549858.MC45_09800	3.934e-293	909.0	COG1501@1|root,COG1501@2|Bacteria,1MWNJ@1224|Proteobacteria,2U1U0@28211|Alphaproteobacteria,2K146@204457|Sphingomonadales	204457|Sphingomonadales	G	Belongs to the glycosyl hydrolase 31 family	-	-	3.2.1.177	ko:K01811	-	-	-	-	ko00000,ko01000	-	GH31	-	DUF5110,Glyco_hydro_31,PA14
SRD3_k127_6306799_1	1090320.KB900605_gene2647	2.433e-314	974.0	COG0308@1|root,COG0308@2|Bacteria,1MUV3@1224|Proteobacteria,2TVKQ@28211|Alphaproteobacteria,2K1RS@204457|Sphingomonadales	204457|Sphingomonadales	E	Peptidase family M1 domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M1
SRD3_k127_6306799_0	323097.Nham_1018	0.0	1049.0	COG4447@1|root,COG4447@2|Bacteria,1R7B0@1224|Proteobacteria,2V8VF@28211|Alphaproteobacteria,3K39Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Common central domain of tyrosinase	-	-	1.14.18.1	ko:K00505	ko00350,ko00950,ko00965,ko01100,ko01110,ko04916,map00350,map00950,map00965,map01100,map01110,map04916	M00042	R00731,R02078,R02363,R02383,R04693,R04884	RC00046,RC00150,RC00180	ko00000,ko00001,ko00002,ko01000	-	-	-	Tyrosinase
SRD3_k127_6306799_3	323097.Nham_1019	1.336e-122	398.0	28IH4@1|root,2Z8IE@2|Bacteria,1N4IS@1224|Proteobacteria,2U2RF@28211|Alphaproteobacteria,3K3GW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_633696_4	1470591.BW41_00695	8.577e-32	125.0	COG2068@1|root,COG2068@2|Bacteria,1MW0X@1224|Proteobacteria,2TR5D@28211|Alphaproteobacteria,2K40X@204457|Sphingomonadales	204457|Sphingomonadales	S	MobA-like NTP transferase domain	-	-	2.7.7.76	ko:K07141	ko00790,map00790	-	R11582	-	ko00000,ko00001,ko01000	-	-	-	NTP_transf_3
SRD3_k127_633696_0	629773.AORY01000004_gene55	4.552e-199	628.0	COG0577@1|root,COG0577@2|Bacteria,1PBKH@1224|Proteobacteria,2TW3U@28211|Alphaproteobacteria,2K1A6@204457|Sphingomonadales	204457|Sphingomonadales	V	ABC-type antimicrobial peptide transport system, permease component	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
SRD3_k127_633696_2	1007104.SUS17_3663	3.419e-127	411.0	COG1136@1|root,COG1136@2|Bacteria,1MU45@1224|Proteobacteria,2TS3W@28211|Alphaproteobacteria,2JZYQ@204457|Sphingomonadales	204457|Sphingomonadales	V	ABC transporter	-	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
SRD3_k127_633696_1	1112212.JH584235_gene3258	7.36e-188	599.0	COG0845@1|root,COG0845@2|Bacteria,1MU8D@1224|Proteobacteria,2U139@28211|Alphaproteobacteria,2K18J@204457|Sphingomonadales	204457|Sphingomonadales	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K02005	-	-	-	-	ko00000	-	-	-	HlyD_D23
SRD3_k127_633696_3	1379701.JPJC01000112_gene518	5.815e-65	226.0	COG1538@1|root,COG1538@2|Bacteria,1MUA8@1224|Proteobacteria,2TSN8@28211|Alphaproteobacteria,2K0NT@204457|Sphingomonadales	204457|Sphingomonadales	MU	RND efflux system, outer membrane lipoprotein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
SRD3_k127_6346302_9	1396141.BATP01000056_gene3212	1.546e-22	103.0	COG0110@1|root,COG0110@2|Bacteria,46VHY@74201|Verrucomicrobia,2IW1D@203494|Verrucomicrobiae	203494|Verrucomicrobiae	S	maltose O-acetyltransferase activity	-	-	-	ko:K03818	-	-	-	-	ko00000,ko01000	-	-	-	-
SRD3_k127_6346302_2	670307.HYPDE_24698	1.345e-89	310.0	COG0438@1|root,COG0438@2|Bacteria,1MWEM@1224|Proteobacteria,2U1NW@28211|Alphaproteobacteria,3N8M7@45401|Hyphomicrobiaceae	28211|Alphaproteobacteria	M	Glycosyl transferase 4-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
SRD3_k127_6346302_3	768671.ThimaDRAFT_0455	5.028e-71	257.0	COG0438@1|root,COG0438@2|Bacteria,1RF49@1224|Proteobacteria,1SHY6@1236|Gammaproteobacteria	1236|Gammaproteobacteria	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_1
SRD3_k127_6346302_11	1303518.CCALI_01949	4.414e-19	102.0	COG0438@1|root,COG0438@2|Bacteria	2|Bacteria	M	transferase activity, transferring glycosyl groups	sypP	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1
SRD3_k127_6346302_6	107635.AZUO01000004_gene3866	5.126e-48	186.0	COG0438@1|root,COG0438@2|Bacteria,1MVKB@1224|Proteobacteria,2U53J@28211|Alphaproteobacteria,370CM@31993|Methylocystaceae	28211|Alphaproteobacteria	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
SRD3_k127_6346302_10	1380391.JIAS01000007_gene3262	2.551e-21	108.0	28KF0@1|root,2ZA18@2|Bacteria,1R7MD@1224|Proteobacteria,2U08E@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6346302_8	222534.KB893670_gene3884	4.183e-28	126.0	COG0438@1|root,COG1216@1|root,COG0438@2|Bacteria,COG1216@2|Bacteria,2I5Z7@201174|Actinobacteria,4ESIU@85013|Frankiales	201174|Actinobacteria	M	Glycosyltransferase like family 2	-	-	2.4.1.289	ko:K16870	-	-	-	-	ko00000,ko01000,ko01003	-	-	-	Glyco_tranf_2_3,Glyco_trans_1_4,Glyco_trans_2_3,Glycos_transf_2
SRD3_k127_6346302_4	629773.AORY01000021_gene2355	1.848e-67	248.0	COG3307@1|root,COG3307@2|Bacteria,1N225@1224|Proteobacteria,2U6JI@28211|Alphaproteobacteria,2K3WT@204457|Sphingomonadales	204457|Sphingomonadales	M	O-Antigen ligase	-	-	-	-	-	-	-	-	-	-	-	-	Wzy_C
SRD3_k127_6346302_7	1550073.JROH01000003_gene2415	1.39e-35	151.0	2AM6I@1|root,31C14@2|Bacteria,1Q7ZG@1224|Proteobacteria,2VE57@28211|Alphaproteobacteria,2K7BV@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6346302_0	1280944.HY17_18830	1.285e-183	598.0	COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,1MVI9@1224|Proteobacteria,2TT1Y@28211|Alphaproteobacteria,43Z27@69657|Hyphomonadaceae	28211|Alphaproteobacteria	DM	G-rich domain on putative tyrosine kinase	-	-	-	ko:K16554,ko:K16692	ko05111,map05111	-	-	-	ko00000,ko00001,ko01000,ko01001,ko02000	8.A.3.1	-	-	AAA_31,CbiA,GNVR,ParA,Wzz
SRD3_k127_6346302_5	1550073.JROH01000003_gene2412	3.332e-64	228.0	COG1596@1|root,COG1596@2|Bacteria,1RE48@1224|Proteobacteria,2U75D@28211|Alphaproteobacteria,2K5VV@204457|Sphingomonadales	204457|Sphingomonadales	M	Periplasmic protein involved in polysaccharide export	-	-	-	-	-	-	-	-	-	-	-	-	Poly_export,SLBB
SRD3_k127_6346302_1	1280944.HY17_19045	2.472e-108	355.0	COG0451@1|root,COG0451@2|Bacteria,1MUGT@1224|Proteobacteria,2TRF6@28211|Alphaproteobacteria,43W4Z@69657|Hyphomonadaceae	28211|Alphaproteobacteria	GM	Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction	fcl	-	1.1.1.271	ko:K02377,ko:K16554	ko00051,ko00520,ko01100,ko05111,map00051,map00520,map01100,map05111	-	R05692	RC01014	ko00000,ko00001,ko01000,ko02000	8.A.3.1	-	-	Epimerase
SRD3_k127_6358863_2	1082933.MEA186_06096	4.898e-45	166.0	COG0457@1|root,COG2114@1|root,COG5616@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,COG5616@2|Bacteria,1MUMZ@1224|Proteobacteria,2TRUI@28211|Alphaproteobacteria	28211|Alphaproteobacteria	T	Adenylate cyclase	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc,TPR_8
SRD3_k127_6358863_0	113395.AXAI01000077_gene6358	1.433e-257	801.0	COG4584@1|root,COG4584@2|Bacteria,1MU2G@1224|Proteobacteria,2TVA2@28211|Alphaproteobacteria,3JRH7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Transposase and inactivated derivatives	-	-	-	-	-	-	-	-	-	-	-	-	HTH_23,rve
SRD3_k127_6358863_1	1304878.AUGD01000036_gene5409	2.22e-118	384.0	COG1484@1|root,COG1484@2|Bacteria,1MVU2@1224|Proteobacteria,2U0PH@28211|Alphaproteobacteria,3JW2M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	IstB-like ATP binding N-terminal	-	-	-	-	-	-	-	-	-	-	-	-	IstB_IS21,IstB_IS21_ATP
SRD3_k127_6358863_3	1472716.KBK24_0122360	1.5e-06	51.0	COG0741@1|root,COG0741@2|Bacteria,1N00I@1224|Proteobacteria,2VRF7@28216|Betaproteobacteria,1K57D@119060|Burkholderiaceae	28216|Betaproteobacteria	M	Transglycosylase SLT domain	-	-	-	ko:K03194	ko03070,map03070	M00333	-	-	ko00000,ko00001,ko00002,ko02044	-	-	-	SLT
SRD3_k127_636272_0	1112214.AHIS01000039_gene1889	0.0	1489.0	COG0574@1|root,COG1080@1|root,COG0574@2|Bacteria,COG1080@2|Bacteria,1MU0R@1224|Proteobacteria,2TR3C@28211|Alphaproteobacteria,2K0KY@204457|Sphingomonadales	204457|Sphingomonadales	G	Belongs to the PEP-utilizing enzyme family	ppdK	-	2.7.9.1	ko:K01006	ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200	M00169,M00171,M00172,M00173	R00206	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000	-	-	-	PEP-utilizers,PEP-utilizers_C,PPDK_N
SRD3_k127_636272_17	1112212.JH584235_gene1291	3.159e-65	228.0	COG5402@1|root,COG5402@2|Bacteria,1N26C@1224|Proteobacteria,2TT9K@28211|Alphaproteobacteria,2K4ZE@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF1214)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1214
SRD3_k127_636272_18	1112212.JH584235_gene1290	6.337e-53	192.0	COG5436@1|root,COG5436@2|Bacteria,1N3Y4@1224|Proteobacteria,2UHPY@28211|Alphaproteobacteria,2K6IE@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF1254)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1254
SRD3_k127_636272_20	1112212.JH584235_gene1289	8.133e-34	140.0	COG3743@1|root,COG3743@2|Bacteria,1Q7FV@1224|Proteobacteria,2VDM3@28211|Alphaproteobacteria,2K5I4@204457|Sphingomonadales	204457|Sphingomonadales	S	rRNA binding	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_636272_7	1112212.JH584235_gene1288	8.98e-164	537.0	COG2064@1|root,COG2064@2|Bacteria,1MWAZ@1224|Proteobacteria,2TSFA@28211|Alphaproteobacteria,2K03P@204457|Sphingomonadales	204457|Sphingomonadales	NU	type II secretion system protein	-	-	-	ko:K12511	-	-	-	-	ko00000,ko02044	-	-	-	T2SSF
SRD3_k127_636272_9	1112214.AHIS01000070_gene3163	1.891e-159	507.0	COG4965@1|root,COG4965@2|Bacteria,1MUXK@1224|Proteobacteria,2TRBI@28211|Alphaproteobacteria,2K0B5@204457|Sphingomonadales	204457|Sphingomonadales	U	pilus assembly protein TadB	-	-	-	ko:K12510	-	-	-	-	ko00000,ko02044	-	-	-	T2SSF
SRD3_k127_636272_3	1112212.JH584235_gene1286	2.234e-223	697.0	COG2204@1|root,COG4963@1|root,COG2204@2|Bacteria,COG4963@2|Bacteria,1MWNY@1224|Proteobacteria,2TUDS@28211|Alphaproteobacteria,2K0BT@204457|Sphingomonadales	204457|Sphingomonadales	TU	Flp pilus assembly protein, ATPase CpaE	cpaE	-	-	ko:K02282	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	CbiA,ParA
SRD3_k127_636272_13	1112214.AHIS01000070_gene3165	1.127e-85	287.0	COG5461@1|root,COG5461@2|Bacteria,1REYP@1224|Proteobacteria,2U8J3@28211|Alphaproteobacteria,2K5AY@204457|Sphingomonadales	204457|Sphingomonadales	N	Pilus assembly protein CpaD	cpaD	-	-	ko:K02281	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	Pilus_CpaD
SRD3_k127_636272_4	1449076.JOOE01000001_gene2975	8.157e-223	706.0	COG4964@1|root,COG4964@2|Bacteria,1MV8G@1224|Proteobacteria,2TRNN@28211|Alphaproteobacteria,2K0ZQ@204457|Sphingomonadales	204457|Sphingomonadales	U	Belongs to the GSP D family	cpaC	-	-	ko:K02280	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	BON,Secretin,T2SS-T3SS_pil_N
SRD3_k127_636272_10	1112212.JH584235_gene1283	4.14e-156	498.0	COG3745@1|root,COG3745@2|Bacteria,1MW75@1224|Proteobacteria,2TTPE@28211|Alphaproteobacteria,2K08W@204457|Sphingomonadales	204457|Sphingomonadales	U	Pilus assembly protein CpaB	cpaB	-	-	ko:K02279	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	RcpC,SAF
SRD3_k127_636272_19	1112216.JH594425_gene3584	1.078e-52	205.0	COG4960@1|root,COG4960@2|Bacteria,1RAYG@1224|Proteobacteria,2UJT9@28211|Alphaproteobacteria,2K6EK@204457|Sphingomonadales	204457|Sphingomonadales	OU	peptidase	cpaA	-	3.4.23.43	ko:K02278	-	-	-	-	ko00000,ko01000,ko02035,ko02044	-	-	-	Peptidase_A24
SRD3_k127_636272_11	1112214.AHIS01000070_gene3169	2.37e-154	492.0	COG2267@1|root,COG2267@2|Bacteria,1MWDA@1224|Proteobacteria,2TSZ4@28211|Alphaproteobacteria,2K0NG@204457|Sphingomonadales	204457|Sphingomonadales	I	Lysophospholipase	-	-	3.1.1.5	ko:K01048	ko00564,map00564	-	-	-	ko00000,ko00001,ko01000	-	-	-	Hydrolase_4
SRD3_k127_636272_6	1112212.JH584235_gene1280	1.637e-170	544.0	COG0665@1|root,COG0665@2|Bacteria,1MY0G@1224|Proteobacteria,2TRM2@28211|Alphaproteobacteria,2JZYS@204457|Sphingomonadales	204457|Sphingomonadales	E	Oxidoreductase	-	-	1.4.99.6	ko:K19746	ko00472,ko01100,map00472,map01100	-	R11018	RC00006	ko00000,ko00001,ko01000	-	-	-	DAO
SRD3_k127_636272_21	1346791.M529_13595	1.448e-24	103.0	COG3422@1|root,COG3422@2|Bacteria,1N6P8@1224|Proteobacteria,2UGRU@28211|Alphaproteobacteria,2K6RV@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF1508)	-	-	-	ko:K09946	-	-	-	-	ko00000	-	-	-	DUF1508
SRD3_k127_636272_14	1112214.AHIS01000070_gene3172	2.628e-84	284.0	COG0328@1|root,COG0328@2|Bacteria,1RCZ1@1224|Proteobacteria,2U7C4@28211|Alphaproteobacteria,2K3YC@204457|Sphingomonadales	204457|Sphingomonadales	L	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	rnhA	-	3.1.26.4	ko:K03469	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	RNase_H
SRD3_k127_636272_12	1449076.JOOE01000001_gene2953	4.379e-146	484.0	COG2334@1|root,COG2334@2|Bacteria,1MUKJ@1224|Proteobacteria,2TS6D@28211|Alphaproteobacteria,2K09Q@204457|Sphingomonadales	204457|Sphingomonadales	F	Belongs to the pseudomonas-type ThrB family	thrB	-	2.7.1.39	ko:K02204	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	M00018	R01771	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	APH
SRD3_k127_636272_8	1112212.JH584235_gene1276	1.084e-163	519.0	COG0761@1|root,COG0761@2|Bacteria,1MU7G@1224|Proteobacteria,2TRNR@28211|Alphaproteobacteria,2K1ES@204457|Sphingomonadales	204457|Sphingomonadales	IM	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis	ispH	-	1.17.7.4	ko:K03527	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05884,R08210	RC01137,RC01487	ko00000,ko00001,ko00002,ko01000	-	-	-	LYTB
SRD3_k127_636272_15	1112216.JH594425_gene3577	2.982e-81	278.0	2B5IK@1|root,31YDD@2|Bacteria,1RAZF@1224|Proteobacteria,2U6F0@28211|Alphaproteobacteria,2K43H@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_636272_5	1449076.JOOE01000001_gene2950	3.602e-172	547.0	COG0404@1|root,COG0404@2|Bacteria,1MV96@1224|Proteobacteria,2TRN4@28211|Alphaproteobacteria,2K1GI@204457|Sphingomonadales	204457|Sphingomonadales	E	Glycine cleavage system T protein	gcvT	-	2.1.2.10	ko:K00605	ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200	M00532	R01221,R02300,R04125	RC00022,RC00069,RC00183,RC02834	ko00000,ko00001,ko00002,ko01000	-	-	-	GCV_T,GCV_T_C
SRD3_k127_636272_16	1112214.AHIS01000071_gene3178	2.296e-66	227.0	COG0509@1|root,COG0509@2|Bacteria,1RGV7@1224|Proteobacteria,2U9BY@28211|Alphaproteobacteria,2K5E0@204457|Sphingomonadales	204457|Sphingomonadales	E	The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein	gcvH	-	-	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	M00532	R01221	RC00022,RC02834	ko00000,ko00001,ko00002	-	-	-	GCV_H
SRD3_k127_636272_2	1112214.AHIS01000071_gene3179	1.24e-258	800.0	COG0403@1|root,COG0403@2|Bacteria,1MVC1@1224|Proteobacteria,2TR6C@28211|Alphaproteobacteria,2K0IW@204457|Sphingomonadales	204457|Sphingomonadales	E	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor	gcvPA	-	1.4.4.2	ko:K00282	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	-	R01221,R03425	RC00022,RC00929,RC02834,RC02880	ko00000,ko00001,ko01000	-	-	-	GDC-P
SRD3_k127_636272_1	1007104.SUS17_3516	3.588e-288	894.0	COG1003@1|root,COG1003@2|Bacteria,1MUDP@1224|Proteobacteria,2TSFF@28211|Alphaproteobacteria,2K1GP@204457|Sphingomonadales	204457|Sphingomonadales	E	Glycine dehydrogenase (aminomethyl-transferring)	gcvPB	-	1.4.4.2	ko:K00283	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	-	R01221,R03425	RC00022,RC00929,RC02834,RC02880	ko00000,ko00001,ko01000	-	-	-	Aminotran_5
SRD3_k127_636445_1	1144305.PMI02_04257	2.73e-198	634.0	COG0464@1|root,COG0464@2|Bacteria,1NF48@1224|Proteobacteria,2U422@28211|Alphaproteobacteria,2K9Z5@204457|Sphingomonadales	204457|Sphingomonadales	O	ATPase family associated with various cellular activities (AAA)	-	-	-	-	-	-	-	-	-	-	-	-	AAA
SRD3_k127_636445_0	1278073.MYSTI_05986	5.299e-291	925.0	COG3087@1|root,COG5651@1|root,COG3087@2|Bacteria,COG5651@2|Bacteria	2|Bacteria	N	PPE family	gspD	-	2.7.13.3,3.6.4.13	ko:K02453,ko:K02484,ko:K03732,ko:K03980,ko:K12065	ko03018,ko03070,ko05111,map03018,map03070,map05111	M00331,M00394	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko01011,ko02000,ko02022,ko02044,ko03019	2.A.66.4,3.A.15,3.A.7.11.1	-	-	NYN,Secretin,Secretin_N,TrbI
SRD3_k127_6367902_0	1112216.JH594425_gene2784	2.974e-210	659.0	COG0516@1|root,COG0517@1|root,COG0516@2|Bacteria,COG0517@2|Bacteria,1MUJM@1224|Proteobacteria,2TQXC@28211|Alphaproteobacteria,2K0CG@204457|Sphingomonadales	204457|Sphingomonadales	F	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth	guaB	-	1.1.1.205	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	M00050	R01130,R08240	RC00143,RC02207	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	CBS,IMPDH,NMO
SRD3_k127_6367902_1	1112212.JH584235_gene574	1.214e-155	497.0	COG0330@1|root,COG0330@2|Bacteria,1MUM8@1224|Proteobacteria,2TRUY@28211|Alphaproteobacteria,2K2F3@204457|Sphingomonadales	204457|Sphingomonadales	O	COG0330 Membrane protease subunits, stomatin prohibitin homologs	qmcA	-	-	-	-	-	-	-	-	-	-	-	Band_7,Band_7_C
SRD3_k127_6367902_4	1112212.JH584235_gene575	3.603e-46	170.0	COG1585@1|root,COG1585@2|Bacteria,1N241@1224|Proteobacteria,2UC8X@28211|Alphaproteobacteria,2K5WQ@204457|Sphingomonadales	204457|Sphingomonadales	OU	Membrane protein implicated in regulation of membrane protease activity	-	-	-	ko:K07340	-	-	-	-	ko00000	-	-	-	NfeD
SRD3_k127_6367902_5	1112212.JH584235_gene576	4.239e-37	142.0	2ARC9@1|root,31GNA@2|Bacteria,1N6EK@1224|Proteobacteria,2UCRU@28211|Alphaproteobacteria,2K627@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6367902_2	1112214.AHIS01000093_gene526	7.304e-69	240.0	2CKCH@1|root,331PP@2|Bacteria,1QYXW@1224|Proteobacteria,2TY15@28211|Alphaproteobacteria,2KEKB@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6367902_3	1112212.JH584235_gene578	1.274e-50	181.0	COG1866@1|root,COG1866@2|Bacteria,1MWXN@1224|Proteobacteria,2TRC4@28211|Alphaproteobacteria,2JZZG@204457|Sphingomonadales	204457|Sphingomonadales	H	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA	pckA	-	4.1.1.49	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	M00003,M00170	R00341	RC00002,RC02741	ko00000,ko00001,ko00002,ko01000	-	-	-	PEPCK_ATP
SRD3_k127_6374019_2	1192759.AKIB01000017_gene1786	5.272e-194	614.0	COG0045@1|root,COG1042@1|root,COG0045@2|Bacteria,COG1042@2|Bacteria,1MW98@1224|Proteobacteria,2TR24@28211|Alphaproteobacteria,2K9SN@204457|Sphingomonadales	204457|Sphingomonadales	C	CoA binding domain	-	-	-	-	-	-	-	-	-	-	-	-	ATP-grasp_5,CoA_binding_2,Succ_CoA_lig
SRD3_k127_6374019_5	1112212.JH584235_gene3650	3.578e-06	49.0	COG0512@1|root,COG0512@2|Bacteria,1MV5Y@1224|Proteobacteria,2TU3N@28211|Alphaproteobacteria,2K28N@204457|Sphingomonadales	204457|Sphingomonadales	EH	with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis	trpG	-	4.1.3.27	ko:K01658	ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025	M00023	R00985,R00986	RC00010,RC02148,RC02414	ko00000,ko00001,ko00002,ko01000	-	-	-	GATase
SRD3_k127_6374019_3	1192759.AKIB01000017_gene1764	2.283e-160	510.0	COG1024@1|root,COG1024@2|Bacteria,1MVB1@1224|Proteobacteria,2TVK3@28211|Alphaproteobacteria,2K30J@204457|Sphingomonadales	204457|Sphingomonadales	I	Enoyl-CoA hydratase/isomerase	-	-	4.1.2.41,4.2.1.101	ko:K18383	ko00360,ko01100,ko01110,map00360,map01100,map01110	-	R05772,R05773	RC00307,RC01468,RC01828	ko00000,ko00001,ko01000	-	-	-	ECH_1
SRD3_k127_6374019_4	1121124.JNIX01000009_gene2945	7.755e-45	166.0	COG5517@1|root,COG5517@2|Bacteria	2|Bacteria	Q	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_4
SRD3_k127_6374019_0	1088721.NSU_0222	7.129e-264	827.0	COG1894@1|root,COG1894@2|Bacteria,1MV8F@1224|Proteobacteria,2TR1V@28211|Alphaproteobacteria,2K1J7@204457|Sphingomonadales	204457|Sphingomonadales	C	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region	-	-	-	ko:K00124	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	-	R00519	RC02796	ko00000,ko00001	-	-	-	Complex1_51K,NADH_4Fe-4S
SRD3_k127_6374019_1	392499.Swit_1473	2.232e-246	763.0	COG3383@1|root,COG3383@2|Bacteria,1QTZB@1224|Proteobacteria,2TVZI@28211|Alphaproteobacteria,2K3CD@204457|Sphingomonadales	204457|Sphingomonadales	C	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region	-	-	1.17.1.9	ko:K00123	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	-	R00519	RC02796	ko00000,ko00001,ko01000	-	-	-	Fer2_4,Fer4,Fer4_7,Fer4_9,Molybdop_Fe4S4,Molybdopterin,Molydop_binding,NADH-G_4Fe-4S_3
SRD3_k127_6384763_7	1379701.JPJC01000018_gene2069	3.288e-76	257.0	COG0137@1|root,COG0137@2|Bacteria,1MV0Y@1224|Proteobacteria,2TTGS@28211|Alphaproteobacteria,2K0AN@204457|Sphingomonadales	204457|Sphingomonadales	E	Belongs to the argininosuccinate synthase family. Type 1 subfamily	argG	-	6.3.4.5	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	M00029,M00844,M00845	R01954	RC00380,RC00629	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Arginosuc_synth
SRD3_k127_6384763_3	685778.AORL01000013_gene2043	1.362e-164	533.0	COG0534@1|root,COG0534@2|Bacteria,1MV6B@1224|Proteobacteria,2TSKZ@28211|Alphaproteobacteria,2K3P8@204457|Sphingomonadales	204457|Sphingomonadales	V	MATE efflux family protein	-	-	-	ko:K03327	-	-	-	-	ko00000,ko02000	2.A.66.1	-	-	MatE
SRD3_k127_6384763_8	1161401.ASJA01000012_gene892	7.438e-47	172.0	2CHCP@1|root,32S5R@2|Bacteria,1MZ97@1224|Proteobacteria,2U9KI@28211|Alphaproteobacteria,43Y10@69657|Hyphomonadaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DU1801)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801
SRD3_k127_6384763_2	1112216.JH594425_gene537	5.733e-213	666.0	COG2230@1|root,COG2230@2|Bacteria,1MX3U@1224|Proteobacteria,2TR8K@28211|Alphaproteobacteria,2K0PR@204457|Sphingomonadales	204457|Sphingomonadales	M	synthase	-	-	2.1.1.79	ko:K00574	-	-	-	-	ko00000,ko01000	-	-	-	CMAS
SRD3_k127_6384763_4	1112216.JH594425_gene538	2.756e-128	420.0	COG2041@1|root,COG2041@2|Bacteria,1MUW0@1224|Proteobacteria,2TS40@28211|Alphaproteobacteria,2K206@204457|Sphingomonadales	204457|Sphingomonadales	S	COG2041 Sulfite oxidase and related enzymes	-	-	-	-	-	-	-	-	-	-	-	-	Oxidored_molyb
SRD3_k127_6384763_5	1112212.JH584235_gene2107	3.624e-111	364.0	COG4117@1|root,COG4117@2|Bacteria,1MX97@1224|Proteobacteria,2U0ZF@28211|Alphaproteobacteria,2K0DE@204457|Sphingomonadales	204457|Sphingomonadales	C	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)	-	-	-	-	-	-	-	-	-	-	-	-	Ni_hydr_CYTB
SRD3_k127_6384763_0	1090320.KB900605_gene1584	4.674e-238	738.0	COG0820@1|root,COG0820@2|Bacteria,1MUYK@1224|Proteobacteria,2TQT3@28211|Alphaproteobacteria,2K0CT@204457|Sphingomonadales	204457|Sphingomonadales	J	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs	rlmN	-	2.1.1.192	ko:K06941	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Radical_SAM
SRD3_k127_6384763_6	1379701.JPJC01000141_gene32	3.45e-108	358.0	COG2267@1|root,COG2267@2|Bacteria,1MW9H@1224|Proteobacteria,2U1YC@28211|Alphaproteobacteria,2K03U@204457|Sphingomonadales	204457|Sphingomonadales	I	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
SRD3_k127_6384763_1	1380394.JADL01000010_gene4176	7.504e-214	685.0	COG4773@1|root,COG4773@2|Bacteria,1QUZ6@1224|Proteobacteria	1224|Proteobacteria	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	CarboxypepD_reg,Plug,TonB_dep_Rec
SRD3_k127_6384763_9	452662.SJA_C1-18930	2.173e-08	61.0	2ARMY@1|root,31GYM@2|Bacteria,1QEMZ@1224|Proteobacteria,2UZ7P@28211|Alphaproteobacteria,2K8A4@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_639105_2	983920.Y88_1518	2.704e-299	924.0	COG1657@1|root,COG1657@2|Bacteria,1MUIP@1224|Proteobacteria,2TRF3@28211|Alphaproteobacteria,2K06U@204457|Sphingomonadales	204457|Sphingomonadales	I	PFAM Prenyltransferase squalene oxidase	-	-	4.2.1.129,5.4.99.17	ko:K06045	ko00909,ko01110,map00909,map01110	-	R07322,R07323	RC01850,RC01851	ko00000,ko00001,ko01000	-	-	-	SQHop_cyclase_C,SQHop_cyclase_N
SRD3_k127_639105_8	1097668.BYI23_B013730	1.018e-18	97.0	COG0775@1|root,COG0775@2|Bacteria,1PETT@1224|Proteobacteria,2VX38@28216|Betaproteobacteria,1K1N8@119060|Burkholderiaceae	28216|Betaproteobacteria	F	Phosphorylase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PNP_UDP_1
SRD3_k127_639105_3	1112212.JH584235_gene3536	1.019e-231	719.0	COG0535@1|root,COG0535@2|Bacteria,1MXM1@1224|Proteobacteria,2TT7D@28211|Alphaproteobacteria,2K3PG@204457|Sphingomonadales	204457|Sphingomonadales	S	TIGRFAM hopanoid biosynthesis associated radical SAM protein HpnH	-	-	-	-	-	-	-	-	-	-	-	-	DUF3463,Fer4_12,Fer4_14,Radical_SAM
SRD3_k127_639105_4	1112214.AHIS01000063_gene2757	2.375e-149	478.0	COG0761@1|root,COG0761@2|Bacteria,1MU7G@1224|Proteobacteria,2TRNR@28211|Alphaproteobacteria,2K1ES@204457|Sphingomonadales	204457|Sphingomonadales	IM	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis	ispH	-	1.17.7.4	ko:K03527	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05884,R08210	RC01137,RC01487	ko00000,ko00001,ko00002,ko01000	-	-	-	LYTB
SRD3_k127_639105_6	1112214.AHIS01000063_gene2758	1.544e-72	250.0	COG2854@1|root,COG2854@2|Bacteria,1N275@1224|Proteobacteria,2UAJR@28211|Alphaproteobacteria,2KC9Q@204457|Sphingomonadales	204457|Sphingomonadales	Q	MlaC protein	-	-	-	-	-	-	-	-	-	-	-	-	MlaC
SRD3_k127_639105_5	1112212.JH584235_gene3539	1.092e-84	293.0	COG2853@1|root,COG2853@2|Bacteria,1MVX0@1224|Proteobacteria,2U7CZ@28211|Alphaproteobacteria,2K3Q5@204457|Sphingomonadales	204457|Sphingomonadales	M	Lipoprotein	-	-	-	ko:K04754	-	-	-	-	ko00000	-	-	-	MlaA
SRD3_k127_639105_0	983920.Y88_1524	0.0	1133.0	COG4258@1|root,COG4258@2|Bacteria,1QW57@1224|Proteobacteria,2TSFU@28211|Alphaproteobacteria,2K219@204457|Sphingomonadales	204457|Sphingomonadales	S	MMPL family	-	-	-	ko:K07003	-	-	-	-	ko00000	-	-	-	MMPL
SRD3_k127_639105_7	1112216.JH594425_gene2130	6.824e-45	171.0	COG4704@1|root,COG4704@2|Bacteria,1N6RE@1224|Proteobacteria,2UEB7@28211|Alphaproteobacteria,2K5WY@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	DUF2141
SRD3_k127_639105_1	1112216.JH594425_gene1481	0.0	1132.0	COG1154@1|root,COG1154@2|Bacteria,1MUSJ@1224|Proteobacteria,2TRDD@28211|Alphaproteobacteria,2K0XY@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)	dxs	-	2.2.1.7	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	M00096	R05636	RC00032	ko00000,ko00001,ko00002,ko01000	-	-	-	DXP_synthase_N,Transket_pyr,Transketolase_C
SRD3_k127_6411211_5	685778.AORL01000010_gene2680	5.672e-187	589.0	COG1472@1|root,COG1472@2|Bacteria,1MVIV@1224|Proteobacteria,2TS28@28211|Alphaproteobacteria,2JZVY@204457|Sphingomonadales	204457|Sphingomonadales	G	Belongs to the glycosyl hydrolase 3 family	-	-	3.2.1.21	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GH3	-	Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C
SRD3_k127_6411211_0	745310.G432_12105	0.0	1133.0	COG1472@1|root,COG1472@2|Bacteria,1MVIV@1224|Proteobacteria,2TS28@28211|Alphaproteobacteria,2JZVY@204457|Sphingomonadales	204457|Sphingomonadales	G	Belongs to the glycosyl hydrolase 3 family	-	-	3.2.1.21	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GH3	-	Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C
SRD3_k127_6411211_2	685778.AORL01000019_gene1785	4.039e-259	808.0	COG4948@1|root,COG4948@2|Bacteria,1MURK@1224|Proteobacteria,2TV84@28211|Alphaproteobacteria,2JZUU@204457|Sphingomonadales	204457|Sphingomonadales	M	Belongs to the mandelate racemase muconate lactonizing enzyme family	rspA	GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0008150,GO:0008152,GO:0008927,GO:0009056,GO:0016052,GO:0016829,GO:0016835,GO:0016836,GO:0043167,GO:0043169,GO:0044238,GO:0046872,GO:0071704,GO:1901575	4.2.1.8	ko:K08323	ko00040,ko01100,map00040,map01100	M00061	R05606	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	MR_MLE_C,MR_MLE_N
SRD3_k127_6411211_1	685778.AORL01000019_gene1707	6.626e-263	814.0	COG1904@1|root,COG1904@2|Bacteria,1MVRI@1224|Proteobacteria,2TS93@28211|Alphaproteobacteria,2JZWP@204457|Sphingomonadales	204457|Sphingomonadales	G	glucuronate isomerase	uxaC	-	5.3.1.12	ko:K01812	ko00040,ko01100,map00040,map01100	M00061,M00631	R01482,R01983	RC00376	ko00000,ko00001,ko00002,ko01000	-	-	-	UxaC
SRD3_k127_6411211_10	1112212.JH584235_gene2677	0.0005346	44.0	COG0346@1|root,COG0351@1|root,COG0346@2|Bacteria,COG0351@2|Bacteria,1MU9J@1224|Proteobacteria,2TUKR@28211|Alphaproteobacteria,2K24Q@204457|Sphingomonadales	204457|Sphingomonadales	H	Phosphomethylpyrimidine kinase	thiD	-	2.7.1.49,2.7.4.7	ko:K00941	ko00730,ko01100,map00730,map01100	M00127	R03471,R04509	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyoxalase,Phos_pyr_kin
SRD3_k127_6411211_4	745310.G432_12085	7.945e-214	674.0	COG0246@1|root,COG0246@2|Bacteria,1MVZ7@1224|Proteobacteria,2TRBE@28211|Alphaproteobacteria,2JZW9@204457|Sphingomonadales	204457|Sphingomonadales	G	PFAM Mannitol dehydrogenase	-	-	1.1.1.57,1.1.1.67	ko:K00040,ko:K00045	ko00040,ko00051,ko01100,map00040,map00051,map01100	M00061	R00868,R02454	RC00085	ko00000,ko00001,ko00002,ko01000	-	-	-	Mannitol_dh,Mannitol_dh_C
SRD3_k127_6411211_6	685778.AORL01000010_gene2678	5.508e-172	552.0	COG2755@1|root,COG2755@2|Bacteria,1MXBN@1224|Proteobacteria,2U079@28211|Alphaproteobacteria,2K27U@204457|Sphingomonadales	204457|Sphingomonadales	E	GDSL-like Lipase/Acylhydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
SRD3_k127_6411211_8	1163408.UU9_00175	8.416e-86	295.0	COG0726@1|root,COG0726@2|Bacteria,1RFCG@1224|Proteobacteria,1S808@1236|Gammaproteobacteria,1X451@135614|Xanthomonadales	135614|Xanthomonadales	G	polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
SRD3_k127_6411211_3	1097668.BYI23_B003150	1.454e-236	742.0	COG1012@1|root,COG1012@2|Bacteria,1MY2V@1224|Proteobacteria,2VH0W@28216|Betaproteobacteria,1K10D@119060|Burkholderiaceae	28216|Betaproteobacteria	C	Aldehyde dehydrogenase	-	-	1.2.1.26	ko:K13877	ko00040,ko00053,map00040,map00053	-	R00264	RC00080	ko00000,ko00001,ko01000	-	-	-	Aldedh
SRD3_k127_6411211_9	1030157.AFMP01000062_gene3608	9.898e-72	246.0	COG0431@1|root,COG0431@2|Bacteria,1RH7F@1224|Proteobacteria,2VG84@28211|Alphaproteobacteria,2KD61@204457|Sphingomonadales	204457|Sphingomonadales	S	Flavodoxin-like fold	-	-	-	-	-	-	-	-	-	-	-	-	FMN_red
SRD3_k127_6411211_7	1449076.JOOE01000001_gene2747	6.896e-131	423.0	COG0577@1|root,COG0577@2|Bacteria,1NREW@1224|Proteobacteria,2U1KH@28211|Alphaproteobacteria,2K128@204457|Sphingomonadales	204457|Sphingomonadales	V	MacB-like periplasmic core domain	-	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
SRD3_k127_6476051_3	1112216.JH594425_gene1873	3.039e-110	364.0	COG0040@1|root,COG0040@2|Bacteria,1MUCY@1224|Proteobacteria,2TT0H@28211|Alphaproteobacteria,2K1K3@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity	hisG	-	2.4.2.17	ko:K00765	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R01071	RC02819,RC03200	ko00000,ko00001,ko00002,ko01000	-	-	-	HisG
SRD3_k127_6476051_1	1112216.JH594425_gene1872	1.718e-131	428.0	COG4427@1|root,COG4427@2|Bacteria,1R4EV@1224|Proteobacteria,2TRVP@28211|Alphaproteobacteria,2K05T@204457|Sphingomonadales	204457|Sphingomonadales	S	Uncharacterized protein conserved in bacteria (DUF2332)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2332
SRD3_k127_6476051_2	1174684.EBMC1_02930	1.637e-125	412.0	COG5001@1|root,COG5001@2|Bacteria,1N17Z@1224|Proteobacteria,2TW6I@28211|Alphaproteobacteria,2K4S0@204457|Sphingomonadales	204457|Sphingomonadales	T	diguanylate cyclase	-	-	-	-	-	-	-	-	-	-	-	-	GGDEF
SRD3_k127_6476051_0	1120705.FG95_00455	4.313e-244	771.0	COG0753@1|root,COG0753@2|Bacteria,1QTVV@1224|Proteobacteria,2U1JJ@28211|Alphaproteobacteria,2K1MI@204457|Sphingomonadales	204457|Sphingomonadales	P	Lipoxygenase	-	-	-	-	-	-	-	-	-	-	-	-	Lipoxygenase
SRD3_k127_6476051_5	1449049.JONW01000005_gene1381	1.838e-58	209.0	COG5649@1|root,COG5649@2|Bacteria	2|Bacteria	E	Domain of unknown function (DU1801)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801
SRD3_k127_6476051_4	1449076.JOOE01000003_gene3534	1.426e-61	213.0	COG5507@1|root,COG5507@2|Bacteria,1RHC1@1224|Proteobacteria,2UC7A@28211|Alphaproteobacteria,2KA7B@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF1428)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1428
SRD3_k127_654809_1	1112212.JH584235_gene3402	7.211e-167	533.0	COG0593@1|root,COG0593@2|Bacteria,1MU5H@1224|Proteobacteria,2TT03@28211|Alphaproteobacteria,2JZZ0@204457|Sphingomonadales	204457|Sphingomonadales	L	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids	dnaA	-	-	ko:K02313	ko02020,ko04112,map02020,map04112	-	-	-	ko00000,ko00001,ko03032,ko03036	-	-	-	Bac_DnaA,Bac_DnaA_C,DnaA_N
SRD3_k127_654809_5	1090320.KB900605_gene3230	8.257e-38	144.0	COG0268@1|root,COG0268@2|Bacteria,1MZ94@1224|Proteobacteria,2UC42@28211|Alphaproteobacteria,2K617@204457|Sphingomonadales	204457|Sphingomonadales	J	Binds directly to 16S ribosomal RNA	rpsT	-	-	ko:K02968	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S20p
SRD3_k127_654809_4	1112214.AHIS01000065_gene2646	9.764e-135	433.0	COG0266@1|root,COG0266@2|Bacteria,1MVM5@1224|Proteobacteria,2TS4C@28211|Alphaproteobacteria,2K2A5@204457|Sphingomonadales	204457|Sphingomonadales	L	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates	fpg	-	3.2.2.23,4.2.99.18	ko:K10563	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Fapy_DNA_glyco,H2TH,zf-FPG_IleRS
SRD3_k127_654809_3	1379701.JPJC01000261_gene3566	1.506e-144	459.0	COG0500@1|root,COG2226@2|Bacteria,1MX8I@1224|Proteobacteria,2TRWR@28211|Alphaproteobacteria,2K080@204457|Sphingomonadales	204457|Sphingomonadales	H	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2)	ubiE	-	2.1.1.163,2.1.1.201	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116,M00117	R04990,R04993,R06859,R08774,R09736	RC00003,RC01253,RC01662	ko00000,ko00001,ko00002,ko01000	-	-	-	Ubie_methyltran
SRD3_k127_654809_0	1112216.JH594425_gene140	2.142e-289	894.0	COG0661@1|root,COG0661@2|Bacteria,1MU1Z@1224|Proteobacteria,2TS87@28211|Alphaproteobacteria,2K1BA@204457|Sphingomonadales	204457|Sphingomonadales	S	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis	ubiB	-	-	ko:K03688	-	-	-	-	ko00000	-	-	-	ABC1
SRD3_k127_654809_2	1112214.AHIS01000064_gene2716	3.794e-153	495.0	2CC90@1|root,33XAD@2|Bacteria,1MYKP@1224|Proteobacteria,2UAV3@28211|Alphaproteobacteria,2K1DP@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_654809_6	1112214.AHIS01000064_gene2715	1.798e-15	76.0	COG0452@1|root,COG0452@2|Bacteria,1MVQP@1224|Proteobacteria,2TRN1@28211|Alphaproteobacteria,2K0N6@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine	coaBC	-	4.1.1.36,6.3.2.5	ko:K13038	ko00770,ko01100,map00770,map01100	M00120	R03269,R04231	RC00064,RC00090,RC00822	ko00000,ko00001,ko00002,ko01000	-	-	-	DFP,Flavoprotein
SRD3_k127_6595163_1	1112216.JH594425_gene3178	1.206e-139	445.0	COG3386@1|root,COG3386@2|Bacteria,1MXVD@1224|Proteobacteria,2TVCW@28211|Alphaproteobacteria,2K1RT@204457|Sphingomonadales	204457|Sphingomonadales	G	SMP-30/Gluconolaconase/LRE-like region	-	-	3.1.1.17	ko:K01053	ko00030,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00030,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220	M00129	R01519,R02933,R03751	RC00537,RC00983	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	SGL
SRD3_k127_6595163_5	1112216.JH594425_gene3179	1.258e-89	300.0	COG1814@1|root,COG1814@2|Bacteria,1MUZE@1224|Proteobacteria,2TT6M@28211|Alphaproteobacteria,2K1CI@204457|Sphingomonadales	204457|Sphingomonadales	S	membrane	-	-	-	-	-	-	-	-	-	-	-	-	VIT1
SRD3_k127_6595163_0	1112212.JH584235_gene486	7.489e-141	449.0	COG1788@1|root,COG1788@2|Bacteria,1MVEI@1224|Proteobacteria,2TTE6@28211|Alphaproteobacteria,2K0EF@204457|Sphingomonadales	204457|Sphingomonadales	I	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit	scoA	-	2.8.3.5	ko:K01028	ko00072,ko00280,ko00650,map00072,map00280,map00650	-	R00410	RC00014	ko00000,ko00001,ko01000	-	-	-	CoA_trans
SRD3_k127_6595163_4	314266.SKA58_05535	1.364e-113	379.0	COG2503@1|root,COG2503@2|Bacteria,1RB4N@1224|Proteobacteria,2U6AV@28211|Alphaproteobacteria,2K2HX@204457|Sphingomonadales	204457|Sphingomonadales	S	HAD superfamily, subfamily IIIB (Acid phosphatase)	-	-	-	-	-	-	-	-	-	-	-	-	Acid_phosphat_B
SRD3_k127_6595163_2	59538.XP_005979594.1	9.036e-125	405.0	COG2057@1|root,KOG3822@2759|Eukaryota,38C4R@33154|Opisthokonta,3BC7C@33208|Metazoa,3CVET@33213|Bilateria,485YW@7711|Chordata,48V68@7742|Vertebrata,3JA81@40674|Mammalia	33208|Metazoa	C	3-oxoacid CoA-transferase activity	OXCT1	-	2.8.3.5	ko:K01027	ko00072,ko00280,ko00650,map00072,map00280,map00650	-	R00410	RC00014	ko00000,ko00001,ko01000	-	-	-	CoA_trans
SRD3_k127_6595163_3	1112214.AHIS01000101_gene1603	1.432e-116	377.0	COG0625@1|root,COG0625@2|Bacteria,1PHM1@1224|Proteobacteria,2TTQZ@28211|Alphaproteobacteria,2K0AP@204457|Sphingomonadales	204457|Sphingomonadales	O	Glutathione S-transferase	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_2,GST_N_3
SRD3_k127_6595163_6	1112216.JH594425_gene3183	3.874e-36	139.0	COG0657@1|root,COG0657@2|Bacteria,1N2XW@1224|Proteobacteria,2U3QT@28211|Alphaproteobacteria,2K2SB@204457|Sphingomonadales	204457|Sphingomonadales	I	Carboxylesterase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3
SRD3_k127_6619066_2	1112212.JH584235_gene2754	3.747e-58	209.0	COG5316@1|root,COG5316@2|Bacteria,1MXED@1224|Proteobacteria,2U1NI@28211|Alphaproteobacteria,2K0YR@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6619066_3	1112216.JH594425_gene1170	4.885e-27	113.0	2ACU7@1|root,312F7@2|Bacteria,1N510@1224|Proteobacteria,2UDTR@28211|Alphaproteobacteria,2K6VE@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6619066_1	1112212.JH584235_gene2756	4.767e-63	221.0	COG0517@1|root,COG0517@2|Bacteria,1N0H3@1224|Proteobacteria,2UC0F@28211|Alphaproteobacteria,2K5EC@204457|Sphingomonadales	204457|Sphingomonadales	S	CBS domain	-	-	-	-	-	-	-	-	-	-	-	-	CBS
SRD3_k127_6619066_0	1112212.JH584235_gene2757	1.259e-237	744.0	COG2244@1|root,COG2244@2|Bacteria,1RANK@1224|Proteobacteria,2VFM4@28211|Alphaproteobacteria,2KDX8@204457|Sphingomonadales	204457|Sphingomonadales	S	Polysaccharide biosynthesis C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_synt_3,Polysacc_synt_C
SRD3_k127_6632315_4	1112216.JH594425_gene2665	1.64e-137	443.0	COG2382@1|root,COG2382@2|Bacteria,1Q7SQ@1224|Proteobacteria,2U21A@28211|Alphaproteobacteria,2K379@204457|Sphingomonadales	204457|Sphingomonadales	P	Putative esterase	-	-	-	ko:K07214	-	-	-	-	ko00000	-	-	-	Esterase
SRD3_k127_6632315_0	685778.AORL01000021_gene471	0.0	1276.0	COG1472@1|root,COG1472@2|Bacteria,1MVIV@1224|Proteobacteria,2U23T@28211|Alphaproteobacteria,2K01Z@204457|Sphingomonadales	204457|Sphingomonadales	G	hydrolase, family 3	-	-	3.2.1.21	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GH3	-	Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C,PA14
SRD3_k127_6632315_2	1112216.JH594425_gene1815	5.085e-157	507.0	COG1077@1|root,COG1077@2|Bacteria,1MUMW@1224|Proteobacteria,2TTQ2@28211|Alphaproteobacteria,2K91W@204457|Sphingomonadales	204457|Sphingomonadales	D	Cell division protein FtsA	-	-	-	ko:K03569	-	-	-	-	ko00000,ko02048,ko03036,ko04812	1.A.33.1,9.B.157.1	-	-	MreB_Mbl
SRD3_k127_6632315_1	1234595.C725_1540	7.513e-270	837.0	COG0388@1|root,COG3153@1|root,COG0388@2|Bacteria,COG3153@2|Bacteria,1MX4I@1224|Proteobacteria,2TVMQ@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,CN_hydrolase
SRD3_k127_6632315_3	1449076.JOOE01000001_gene2703	1.237e-147	476.0	2D579@1|root,32TID@2|Bacteria,1RH2N@1224|Proteobacteria,2U9TR@28211|Alphaproteobacteria,2K8SX@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6632315_5	1449076.JOOE01000001_gene2704	7.388e-131	426.0	COG0583@1|root,COG0583@2|Bacteria,1MWY0@1224|Proteobacteria,2TSD9@28211|Alphaproteobacteria,2K9Q6@204457|Sphingomonadales	204457|Sphingomonadales	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SRD3_k127_6632315_6	1449076.JOOE01000003_gene3338	8.325e-53	195.0	COG0810@1|root,COG0810@2|Bacteria,1NB5F@1224|Proteobacteria,2USI1@28211|Alphaproteobacteria,2K2ZM@204457|Sphingomonadales	204457|Sphingomonadales	M	Gram-negative bacterial TonB protein C-terminal	-	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_C
SRD3_k127_6633406_7	685778.AORL01000021_gene920	2.819e-42	159.0	COG3794@1|root,COG3794@2|Bacteria,1N2CZ@1224|Proteobacteria,2UEDD@28211|Alphaproteobacteria,2K66I@204457|Sphingomonadales	204457|Sphingomonadales	C	PFAM blue (type 1) copper domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Cupredoxin_1
SRD3_k127_6633406_1	685778.AORL01000021_gene923	6.136e-146	475.0	COG1404@1|root,COG1404@2|Bacteria,1MU3S@1224|Proteobacteria,2TT0E@28211|Alphaproteobacteria	28211|Alphaproteobacteria	O	Peptidase S8 and S53 subtilisin kexin sedolisin	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
SRD3_k127_6633406_8	1112212.JH584235_gene3481	3.854e-16	85.0	COG1426@1|root,COG1426@2|Bacteria,1NIQS@1224|Proteobacteria	1224|Proteobacteria	S	Protein conserved in bacteria	-	-	-	ko:K15539	-	-	-	-	ko00000	-	-	-	DUF4115,HTH_25
SRD3_k127_6633406_6	1112214.AHIS01000023_gene1297	3.096e-58	207.0	COG3152@1|root,COG3152@2|Bacteria,1MZJ4@1224|Proteobacteria,2UG35@28211|Alphaproteobacteria,2K5JP@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF805)	-	-	-	-	-	-	-	-	-	-	-	-	DUF805
SRD3_k127_6633406_4	196367.JNFG01000018_gene4224	5.633e-80	276.0	2DBRK@1|root,2ZAME@2|Bacteria,1P1YU@1224|Proteobacteria,2W2EC@28216|Betaproteobacteria	28216|Betaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6633406_5	876269.ARWA01000001_gene146	9.541e-67	243.0	28MBY@1|root,2ZAQB@2|Bacteria,1RGAK@1224|Proteobacteria,2U8T1@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6633406_2	1283300.ATXB01000002_gene3055	4.884e-144	475.0	COG2837@1|root,COG2837@2|Bacteria,1MXKF@1224|Proteobacteria,1S153@1236|Gammaproteobacteria,1XGPJ@135618|Methylococcales	135618|Methylococcales	P	peroxidase	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6633406_3	1449076.JOOE01000004_gene385	1.676e-87	304.0	COG2124@1|root,COG2124@2|Bacteria,1MWRZ@1224|Proteobacteria,2TVEQ@28211|Alphaproteobacteria,2K3ZB@204457|Sphingomonadales	204457|Sphingomonadales	Q	Cytochrome P450	-	-	-	-	-	-	-	-	-	-	-	-	p450
SRD3_k127_6633406_0	1123269.NX02_18065	2.138e-172	543.0	COG1874@1|root,COG1874@2|Bacteria,1MUVR@1224|Proteobacteria,2TTC5@28211|Alphaproteobacteria,2K27Y@204457|Sphingomonadales	204457|Sphingomonadales	G	beta-galactosidase	-	-	3.2.1.23	ko:K12308	ko00052,map00052	-	R01105	RC00452	ko00000,ko00001,ko01000	-	-	-	Glyco_hydro_42,Glyco_hydro_42C,Glyco_hydro_42M
SRD3_k127_6694312_4	1470591.BW41_01701	1.118e-96	323.0	COG1609@1|root,COG1609@2|Bacteria,1MUEP@1224|Proteobacteria,2U7WF@28211|Alphaproteobacteria,2K2KB@204457|Sphingomonadales	204457|Sphingomonadales	K	helix_turn _helix lactose operon repressor	-	-	-	ko:K06145	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_3
SRD3_k127_6694312_1	1123269.NX02_17600	3.855e-189	596.0	COG2124@1|root,COG2124@2|Bacteria,1MY5H@1224|Proteobacteria,2TR6X@28211|Alphaproteobacteria,2K3RN@204457|Sphingomonadales	204457|Sphingomonadales	C	cytochrome P450	-	-	-	-	-	-	-	-	-	-	-	-	p450
SRD3_k127_6694312_5	1122918.KB907249_gene3885	2.758e-87	309.0	COG2843@1|root,COG2843@2|Bacteria,1UCFI@1239|Firmicutes,4HE6D@91061|Bacilli,26RGF@186822|Paenibacillaceae	91061|Bacilli	M	enzyme of poly-gamma-glutamate biosynthesis (Capsule formation)	-	-	-	ko:K07282	-	-	-	-	ko00000	-	-	-	PGA_cap
SRD3_k127_6694312_3	702113.PP1Y_Mpl599	5.895e-120	402.0	COG2271@1|root,COG2271@2|Bacteria,1MUEK@1224|Proteobacteria,2TS60@28211|Alphaproteobacteria,2K32T@204457|Sphingomonadales	204457|Sphingomonadales	G	Major Facilitator	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SRD3_k127_6694312_2	715226.ABI_44950	1.124e-131	436.0	COG2079@1|root,COG2079@2|Bacteria,1R5UM@1224|Proteobacteria,2U1F8@28211|Alphaproteobacteria,2KIET@204458|Caulobacterales	204458|Caulobacterales	S	MmgE/PrpD family	-	-	-	-	-	-	-	-	-	-	-	-	MmgE_PrpD
SRD3_k127_6694312_0	702113.PP1Y_Mpl626	1.138e-274	863.0	COG4773@1|root,COG4773@2|Bacteria,1QWUE@1224|Proteobacteria,2UP1W@28211|Alphaproteobacteria,2K3PE@204457|Sphingomonadales	204457|Sphingomonadales	P	TonB-dependent Receptor Plug Domain	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SRD3_k127_6694312_6	1282360.ABAC460_13075	6.54e-58	210.0	COG1858@1|root,COG1858@2|Bacteria,1REQ9@1224|Proteobacteria,2U8Q0@28211|Alphaproteobacteria	28211|Alphaproteobacteria	C	cytochrome C peroxidase	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6743064_0	1121022.ABENE_21620	3.937e-219	702.0	COG0339@1|root,COG0339@2|Bacteria,1R4AJ@1224|Proteobacteria,2UPA9@28211|Alphaproteobacteria,2KK2N@204458|Caulobacterales	204458|Caulobacterales	E	Peptidase family M3	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M3
SRD3_k127_6743064_1	1382230.ASAP_2591	0.0003912	43.0	COG0604@1|root,COG0604@2|Bacteria	2|Bacteria	C	NADPH:quinone reductase activity	-	-	3.5.1.10	ko:K01433	ko00630,ko00670,map00630,map00670	-	R00944	RC00026,RC00111	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_zinc_N,ADH_zinc_N_2
SRD3_k127_6748189_17	742159.HMPREF0004_1953	2.498e-51	188.0	COG3511@1|root,COG3511@2|Bacteria,1MWVP@1224|Proteobacteria,2VMZ4@28216|Betaproteobacteria,3T756@506|Alcaligenaceae	28216|Betaproteobacteria	M	phospholipase C	plcN	-	3.1.4.3	ko:K01114	ko00562,ko00564,ko00565,ko01100,ko01110,ko02024,ko04919,map00562,map00564,map00565,map01100,map01110,map02024,map04919	-	R01312,R02027,R02052,R03332,R07381	RC00017,RC00425	ko00000,ko00001,ko01000,ko02042	-	-	-	DUF756,Phosphoesterase
SRD3_k127_6748189_8	1112212.JH584235_gene2903	6.604e-174	552.0	COG0665@1|root,COG0665@2|Bacteria,1R7JH@1224|Proteobacteria,2U1VP@28211|Alphaproteobacteria,2K0H2@204457|Sphingomonadales	204457|Sphingomonadales	E	FAD dependent oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	DAO
SRD3_k127_6748189_10	1112212.JH584235_gene2902	2.992e-139	446.0	COG0637@1|root,COG0637@2|Bacteria,1MX6B@1224|Proteobacteria,2TTVS@28211|Alphaproteobacteria,2K3BB@204457|Sphingomonadales	204457|Sphingomonadales	S	Belongs to the HAD-like hydrolase superfamily. PhnX family	phnX	-	3.11.1.1	ko:K05306	ko00440,ko01100,ko01120,map00440,map01100,map01120	-	R00747	RC00368	ko00000,ko00001,ko01000	-	-	-	Hydrolase
SRD3_k127_6748189_5	1112216.JH594425_gene351	7.945e-211	665.0	2C31A@1|root,2Z7UP@2|Bacteria,1MVB5@1224|Proteobacteria,2TTU0@28211|Alphaproteobacteria,2K2GD@204457|Sphingomonadales	204457|Sphingomonadales	S	Psort location CytoplasmicMembrane, score 10.00	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6748189_1	1112216.JH594425_gene516	0.0	1126.0	COG2366@1|root,COG2366@2|Bacteria,1MVMH@1224|Proteobacteria,2TS4D@28211|Alphaproteobacteria,2K1S8@204457|Sphingomonadales	204457|Sphingomonadales	S	COG2366 Protein related to penicillin acylase	-	-	3.5.1.97	ko:K07116	-	-	-	-	ko00000,ko01000	-	-	-	Penicil_amidase
SRD3_k127_6748189_0	1112216.JH594425_gene514	0.0	1386.0	COG0612@1|root,COG0612@2|Bacteria,1MVST@1224|Proteobacteria,2TRFB@28211|Alphaproteobacteria,2K05M@204457|Sphingomonadales	204457|Sphingomonadales	S	Peptidase, M16	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M16,Peptidase_M16_C
SRD3_k127_6748189_19	1112216.JH594425_gene513	2.818e-43	160.0	2E6S2@1|root,331C5@2|Bacteria,1RH06@1224|Proteobacteria,2U98E@28211|Alphaproteobacteria,2K6C3@204457|Sphingomonadales	204457|Sphingomonadales	S	Signal peptide protein	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6748189_2	1112214.AHIS01000077_gene3826	1.098e-303	944.0	COG2936@1|root,COG2936@2|Bacteria,1MVA8@1224|Proteobacteria,2U29S@28211|Alphaproteobacteria,2K1PW@204457|Sphingomonadales	204457|Sphingomonadales	S	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain	-	-	-	ko:K06978	-	-	-	-	ko00000	-	-	-	PepX_C,Peptidase_S15
SRD3_k127_6748189_7	1112216.JH594425_gene511	1.036e-188	594.0	COG0026@1|root,COG0026@2|Bacteria,1MU70@1224|Proteobacteria,2TRSV@28211|Alphaproteobacteria,2K0ZI@204457|Sphingomonadales	204457|Sphingomonadales	F	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)	purK	-	6.3.4.18	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R07404	RC01927	ko00000,ko00001,ko00002,ko01000	-	-	-	ATP-grasp
SRD3_k127_6748189_15	194867.ALBQ01000002_gene885	8.007e-79	265.0	COG0041@1|root,COG0041@2|Bacteria,1RCWJ@1224|Proteobacteria,2U58D@28211|Alphaproteobacteria,2K3Z8@204457|Sphingomonadales	204457|Sphingomonadales	F	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)	purE	-	5.4.99.18	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R07405	RC01947	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRC
SRD3_k127_6748189_11	1112214.AHIS01000077_gene3830	4.306e-139	443.0	COG0588@1|root,COG0588@2|Bacteria,1MUVE@1224|Proteobacteria,2TSQ0@28211|Alphaproteobacteria,2K06W@204457|Sphingomonadales	204457|Sphingomonadales	G	Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily	gpmA	-	5.4.2.11	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	M00001,M00002,M00003	R01518	RC00536	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	-	-	-	His_Phos_1
SRD3_k127_6748189_6	1379701.JPJC01000049_gene2245	8.017e-207	651.0	COG2866@1|root,COG2866@2|Bacteria,1MUMN@1224|Proteobacteria,2TREN@28211|Alphaproteobacteria,2K01Q@204457|Sphingomonadales	204457|Sphingomonadales	E	Carboxypeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M14
SRD3_k127_6748189_16	1112214.AHIS01000077_gene3832	1.607e-60	217.0	2C2VU@1|root,34305@2|Bacteria,1N3B4@1224|Proteobacteria,2UCFR@28211|Alphaproteobacteria,2K4VX@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4136
SRD3_k127_6748189_22	1112214.AHIS01000077_gene3833	1.544e-16	81.0	COG0257@1|root,COG0257@2|Bacteria,1NGBJ@1224|Proteobacteria,2UJAG@28211|Alphaproteobacteria,2K7QY@204457|Sphingomonadales	204457|Sphingomonadales	J	Belongs to the bacterial ribosomal protein bL36 family	rpmJ	-	-	ko:K02919	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L36
SRD3_k127_6748189_13	1112216.JH594425_gene501	1.982e-98	324.0	COG1011@1|root,COG1011@2|Bacteria,1RHAB@1224|Proteobacteria,2U7PV@28211|Alphaproteobacteria,2K2XU@204457|Sphingomonadales	204457|Sphingomonadales	S	Hydrolase	-	-	3.8.1.2	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	-	R05287	RC00697	ko00000,ko00001,ko01000	-	-	-	HAD_2
SRD3_k127_6748189_3	1112216.JH594425_gene500	6.318e-263	819.0	COG0469@1|root,COG0469@2|Bacteria,1MU21@1224|Proteobacteria,2TRFV@28211|Alphaproteobacteria,2K07D@204457|Sphingomonadales	204457|Sphingomonadales	G	Belongs to the pyruvate kinase family	pyk	-	2.7.1.40	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	M00001,M00002,M00049,M00050	R00200,R00430,R01138,R01858,R02320	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	-	-	-	PK,PK_C
SRD3_k127_6748189_18	1112216.JH594425_gene499	2.543e-45	166.0	COG3492@1|root,COG3492@2|Bacteria,1MZ3I@1224|Proteobacteria,2UC11@28211|Alphaproteobacteria,2K5WC@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	ko:K09948	-	-	-	-	ko00000	-	-	-	DUF1244
SRD3_k127_6748189_21	1123269.NX02_29085	2.163e-33	130.0	COG3750@1|root,COG3750@2|Bacteria,1N77J@1224|Proteobacteria,2UFX6@28211|Alphaproteobacteria,2K5Z1@204457|Sphingomonadales	204457|Sphingomonadales	S	Belongs to the UPF0335 family	-	-	-	-	-	-	-	-	-	-	-	-	DUF2312
SRD3_k127_6748189_9	1112216.JH594425_gene497	4.852e-141	450.0	COG0217@1|root,COG0217@2|Bacteria,1MW3X@1224|Proteobacteria,2TRSK@28211|Alphaproteobacteria,2K0KW@204457|Sphingomonadales	204457|Sphingomonadales	K	transcriptional regulatory protein	-	-	-	-	-	-	-	-	-	-	-	-	Transcrip_reg
SRD3_k127_6748189_14	1112212.JH584235_gene2827	1.496e-80	273.0	COG0817@1|root,COG0817@2|Bacteria,1MUJI@1224|Proteobacteria,2U70Z@28211|Alphaproteobacteria,2K4Q1@204457|Sphingomonadales	204457|Sphingomonadales	L	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group	ruvC	-	3.1.22.4	ko:K01159	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	RuvC
SRD3_k127_6748189_12	1112212.JH584235_gene2828	3.412e-100	329.0	COG0632@1|root,COG0632@2|Bacteria,1MWJR@1224|Proteobacteria,2TSKM@28211|Alphaproteobacteria,2K2JA@204457|Sphingomonadales	204457|Sphingomonadales	L	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB	ruvA	-	3.6.4.12	ko:K03550	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	HHH_5,RuvA_C,RuvA_N
SRD3_k127_6748189_20	1449049.JONW01000011_gene2248	1.959e-40	154.0	COG2329@1|root,COG2329@2|Bacteria,1RHK9@1224|Proteobacteria,2TZMK@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Antibiotic biosynthesis monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6748189_4	1502850.FG91_02156	2.839e-213	713.0	COG5373@1|root,COG5373@2|Bacteria,1N08V@1224|Proteobacteria,2TWNB@28211|Alphaproteobacteria,2K35U@204457|Sphingomonadales	204457|Sphingomonadales	S	Predicted membrane protein (DUF2339)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2339
SRD3_k127_6750893_3	1112216.JH594425_gene1314	5.47e-158	505.0	COG1087@1|root,COG1087@2|Bacteria,1MUHI@1224|Proteobacteria,2TTC7@28211|Alphaproteobacteria,2K1G3@204457|Sphingomonadales	204457|Sphingomonadales	M	Belongs to the NAD(P)-dependent epimerase dehydratase family	galE	-	5.1.3.2	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00361,M00362,M00632	R00291,R02984	RC00289	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase
SRD3_k127_6750893_9	1120705.FG95_03710	9.893e-25	107.0	COG1846@1|root,COG1846@2|Bacteria,1N2Q4@1224|Proteobacteria,2UC5A@28211|Alphaproteobacteria,2K54U@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_27,MarR
SRD3_k127_6750893_0	1331060.RLDS_09495	7.909e-214	671.0	COG1252@1|root,COG1252@2|Bacteria,1MX96@1224|Proteobacteria,2TQT2@28211|Alphaproteobacteria,2K2TX@204457|Sphingomonadales	204457|Sphingomonadales	C	NADH dehydrogenase	-	-	1.6.99.3	ko:K03885	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2
SRD3_k127_6750893_1	317655.Sala_1692	2.116e-205	654.0	COG1960@1|root,COG1960@2|Bacteria,1MVAH@1224|Proteobacteria,2TR02@28211|Alphaproteobacteria,2K124@204457|Sphingomonadales	204457|Sphingomonadales	I	acyl-CoA dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SRD3_k127_6750893_2	1041147.AUFB01000008_gene715	3.167e-164	519.0	COG0625@1|root,COG0625@2|Bacteria,1MUN3@1224|Proteobacteria,2TTDF@28211|Alphaproteobacteria,4B91F@82115|Rhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase	MA20_16405	-	-	ko:K11209	-	-	-	-	ko00000,ko01000	-	-	-	GST_C,GST_C_2,GST_N
SRD3_k127_6750893_4	1282360.ABAC460_05885	3.391e-104	344.0	COG1028@1|root,COG1028@2|Bacteria,1MWGK@1224|Proteobacteria,2TVQ8@28211|Alphaproteobacteria,2KFD8@204458|Caulobacterales	204458|Caulobacterales	IQ	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SRD3_k127_6750893_8	375451.RD1_3844	2.017e-35	152.0	2EIP2@1|root,33CEF@2|Bacteria,1PIZV@1224|Proteobacteria,2VB94@28211|Alphaproteobacteria,2P4BM@2433|Roseobacter	28211|Alphaproteobacteria	S	Uncharacterised nucleotidyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	NTP_transf_5
SRD3_k127_6750893_5	1112212.JH584235_gene1227	9.495e-83	290.0	COG4076@1|root,COG4076@2|Bacteria,1R46U@1224|Proteobacteria,2U32I@28211|Alphaproteobacteria,2K2FY@204457|Sphingomonadales	204457|Sphingomonadales	S	Ribosomal protein L11 methyltransferase (PrmA)	-	-	-	-	-	-	-	-	-	-	-	-	PrmA,TPR_16
SRD3_k127_6750893_10	1367847.JCM7686_pAMI4p230	1.89e-19	99.0	COG4424@1|root,COG4424@2|Bacteria,1RBDG@1224|Proteobacteria,2U6M2@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Stf0 sulphotransferase	-	-	2.8.2.37	ko:K21014	-	-	-	-	ko00000,ko01000	-	-	-	Sulphotransf
SRD3_k127_6750893_6	926566.Terro_4208	1.79e-44	169.0	COG3751@1|root,COG3751@2|Bacteria	2|Bacteria	O	2OG-Fe(II) oxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	2OG-FeII_Oxy_3
SRD3_k127_6750893_11	489825.LYNGBM3L_52080	2.74e-07	55.0	2DRDY@1|root,33BC0@2|Bacteria,1G9R7@1117|Cyanobacteria,1HCUI@1150|Oscillatoriales	1117|Cyanobacteria	S	Coenzyme PQQ synthesis protein D (PqqD)	-	-	-	-	-	-	-	-	-	-	-	-	PqqD
SRD3_k127_6750893_7	298654.FraEuI1c_4583	1.523e-39	160.0	COG0367@1|root,COG0367@2|Bacteria,2H3VY@201174|Actinobacteria	201174|Actinobacteria	E	Asparagine synthase	-	-	6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	-	R00578	RC00010	ko00000,ko00001,ko01000,ko01002	-	-	-	Asn_synthase
SRD3_k127_6756748_1	1114964.L485_01720	4.954e-48	175.0	COG0843@1|root,COG0843@2|Bacteria,1MU7S@1224|Proteobacteria,2TQP1@28211|Alphaproteobacteria,2K8M4@204457|Sphingomonadales	204457|Sphingomonadales	C	Belongs to the heme-copper respiratory oxidase family	-	-	-	-	-	-	-	-	-	-	-	-	COX1
SRD3_k127_6756748_0	1114964.L485_01715	3.681e-55	200.0	COG1845@1|root,COG1845@2|Bacteria,1RJUV@1224|Proteobacteria,2UHNV@28211|Alphaproteobacteria	28211|Alphaproteobacteria	C	Cytochrome c oxidase subunit III	-	-	1.9.3.1	ko:K02276	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.4,3.D.4.6	-	-	COX3
SRD3_k127_6756748_4	1090319.KE386571_gene890	7.368e-19	92.0	COG3474@1|root,COG3474@2|Bacteria,1N7IW@1224|Proteobacteria,2UFCP@28211|Alphaproteobacteria,2K730@204457|Sphingomonadales	204457|Sphingomonadales	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
SRD3_k127_6756748_3	1114964.L485_01695	4.925e-35	139.0	COG4772@1|root,COG4993@1|root,COG4772@2|Bacteria,COG4993@2|Bacteria,1MXJU@1224|Proteobacteria,2TRYT@28211|Alphaproteobacteria,2K004@204457|Sphingomonadales	204457|Sphingomonadales	P	receptor	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SRD3_k127_6832592_5	1112214.AHIS01000094_gene574	8.282e-129	413.0	COG0173@1|root,COG0173@2|Bacteria,1MUXB@1224|Proteobacteria,2TR9U@28211|Alphaproteobacteria,2K0PT@204457|Sphingomonadales	204457|Sphingomonadales	J	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)	aspS	-	6.1.1.12	ko:K01876	ko00970,map00970	M00359,M00360	R05577	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	GAD,tRNA-synt_2,tRNA_anti-codon
SRD3_k127_6832592_4	1112214.AHIS01000094_gene573	6.176e-136	435.0	COG2326@1|root,COG2326@2|Bacteria,1MVE2@1224|Proteobacteria,2TSU8@28211|Alphaproteobacteria,2K0KF@204457|Sphingomonadales	204457|Sphingomonadales	S	Polyphosphate kinase 2 (PPK2)	ppk2	-	-	-	-	-	-	-	-	-	-	-	PPK2
SRD3_k127_6832592_7	1449076.JOOE01000001_gene1808	6.381e-109	356.0	COG0288@1|root,COG0288@2|Bacteria,1NGFN@1224|Proteobacteria,2TRPD@28211|Alphaproteobacteria,2K1U7@204457|Sphingomonadales	204457|Sphingomonadales	P	Reversible hydration of carbon dioxide	-	-	4.2.1.1	ko:K01673	ko00910,map00910	-	R00132,R10092	RC02807	ko00000,ko00001,ko01000	-	-	-	Pro_CA
SRD3_k127_6832592_1	1112212.JH584235_gene547	1.661e-182	574.0	COG0320@1|root,COG0320@2|Bacteria,1MVRD@1224|Proteobacteria,2TRP3@28211|Alphaproteobacteria,2K1H4@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives	lipA	-	2.8.1.8	ko:K03644	ko00785,ko01100,map00785,map01100	-	R07767,R07768	RC01978	ko00000,ko00001,ko01000	-	-	-	LIAS_N,Radical_SAM
SRD3_k127_6832592_9	1007104.SUS17_304	1.027e-69	240.0	COG2867@1|root,COG2867@2|Bacteria,1RGUH@1224|Proteobacteria,2U7D8@28211|Alphaproteobacteria,2K41W@204457|Sphingomonadales	204457|Sphingomonadales	I	Oligoketide cyclase lipid transport protein	-	-	-	ko:K18588	-	-	-	-	ko00000	-	-	-	Polyketide_cyc
SRD3_k127_6832592_8	1112216.JH594425_gene2988	4.473e-87	289.0	COG1546@1|root,COG1546@2|Bacteria,1RH2Y@1224|Proteobacteria,2U94H@28211|Alphaproteobacteria,2K40Q@204457|Sphingomonadales	204457|Sphingomonadales	S	Belongs to the CinA family	-	-	3.5.1.42	ko:K03743	ko00760,map00760	-	R02322	RC00100	ko00000,ko00001,ko01000	-	-	-	CinA
SRD3_k127_6832592_10	1090319.KE386571_gene2384	7.04e-26	114.0	2AM6R@1|root,31C1C@2|Bacteria,1NP11@1224|Proteobacteria,2UKD9@28211|Alphaproteobacteria,2K6ZV@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6832592_3	1112212.JH584235_gene550	9.373e-178	563.0	COG0245@1|root,COG1211@1|root,COG0245@2|Bacteria,COG1211@2|Bacteria,1MVHA@1224|Proteobacteria,2TRQC@28211|Alphaproteobacteria,2K0Y0@204457|Sphingomonadales	204457|Sphingomonadales	I	Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF)	ispDF	-	2.7.7.60,4.6.1.12	ko:K12506	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05633,R05637	RC00002,RC01440	ko00000,ko00001,ko00002,ko01000	-	-	-	IspD,YgbB
SRD3_k127_6832592_0	1112214.AHIS01000094_gene565	4.772e-188	592.0	COG0042@1|root,COG0042@2|Bacteria,1MV5V@1224|Proteobacteria,2TRC8@28211|Alphaproteobacteria,2K0QH@204457|Sphingomonadales	204457|Sphingomonadales	J	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines	-	-	-	ko:K05540	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Dus
SRD3_k127_6832592_2	1112212.JH584235_gene552	1.085e-178	565.0	COG3852@1|root,COG3852@2|Bacteria,1MVN6@1224|Proteobacteria,2TQS1@28211|Alphaproteobacteria,2K1YJ@204457|Sphingomonadales	204457|Sphingomonadales	T	Histidine kinase	ntrB	-	2.7.13.3	ko:K07708	ko02020,map02020	M00497	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA,PAS,PAS_4
SRD3_k127_6832592_6	1112212.JH584235_gene553	3.933e-114	381.0	COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,2TQPG@28211|Alphaproteobacteria,2K0MW@204457|Sphingomonadales	204457|Sphingomonadales	T	Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	ntrC	-	-	ko:K07712	ko02020,map02020	M00497	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	HTH_8,Response_reg,Sigma54_activat
SRD3_k127_683520_0	1112212.JH584235_gene1954	3.543e-224	701.0	COG0823@1|root,COG0823@2|Bacteria,1MV09@1224|Proteobacteria,2TR03@28211|Alphaproteobacteria,2K1NT@204457|Sphingomonadales	204457|Sphingomonadales	U	Involved in the TonB-independent uptake of proteins	tolB	-	-	ko:K03641	-	-	-	-	ko00000,ko02000	2.C.1.2	-	-	PD40,TolB_N
SRD3_k127_683520_1	1112216.JH594425_gene854	2.109e-69	239.0	COG2885@1|root,COG2885@2|Bacteria,1MZTV@1224|Proteobacteria,2U758@28211|Alphaproteobacteria,2K49Y@204457|Sphingomonadales	204457|Sphingomonadales	M	Belongs to the ompA family	pal	-	-	ko:K03640	-	-	-	-	ko00000,ko02000	2.C.1.2	-	-	OmpA
SRD3_k127_683520_2	1112214.AHIS01000042_gene3114	9.366e-07	51.0	COG0330@1|root,COG0330@2|Bacteria,1P8ZI@1224|Proteobacteria,2TTBE@28211|Alphaproteobacteria,2JZUP@204457|Sphingomonadales	204457|Sphingomonadales	O	COG0330 Membrane protease subunits, stomatin prohibitin homologs	-	-	-	-	-	-	-	-	-	-	-	-	Band_7
SRD3_k127_6879319_4	1449076.JOOE01000001_gene2636	2.642e-88	293.0	COG2833@1|root,COG2833@2|Bacteria,1MW0V@1224|Proteobacteria,2TQJU@28211|Alphaproteobacteria,2K2JV@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	DUF455
SRD3_k127_6879319_1	1112212.JH584235_gene1377	6.956e-187	592.0	COG0739@1|root,COG0739@2|Bacteria,1MVTF@1224|Proteobacteria,2TQZE@28211|Alphaproteobacteria,2K148@204457|Sphingomonadales	204457|Sphingomonadales	M	COG0739 Membrane proteins related to metalloendopeptidases	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
SRD3_k127_6879319_5	1112212.JH584235_gene1376	1.628e-52	188.0	COG0316@1|root,COG0316@2|Bacteria,1RHCW@1224|Proteobacteria,2UBR8@28211|Alphaproteobacteria,2K54P@204457|Sphingomonadales	204457|Sphingomonadales	S	Belongs to the HesB IscA family	erpA	-	-	-	-	-	-	-	-	-	-	-	Fe-S_biosyn
SRD3_k127_6879319_2	1090318.ATTI01000001_gene2788	1.979e-152	484.0	COG0708@1|root,COG0708@2|Bacteria,1MVII@1224|Proteobacteria,2TR5J@28211|Alphaproteobacteria,2K0HF@204457|Sphingomonadales	204457|Sphingomonadales	L	exodeoxyribonuclease III	xth	-	3.1.11.2	ko:K01142	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exo_endo_phos
SRD3_k127_6879319_3	1112212.JH584235_gene1374	3.33e-96	324.0	2DBBT@1|root,2Z8AC@2|Bacteria,1NTYT@1224|Proteobacteria,2TZZ5@28211|Alphaproteobacteria,2KE5M@204457|Sphingomonadales	204457|Sphingomonadales	S	Putative MetA-pathway of phenol degradation	-	-	-	-	-	-	-	-	-	-	-	-	Phenol_MetA_deg
SRD3_k127_6879319_7	1112216.JH594425_gene2088	9.758e-09	59.0	2AJUN@1|root,31AHA@2|Bacteria,1Q5MY@1224|Proteobacteria,2VCE4@28211|Alphaproteobacteria,2K82K@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6879319_0	1112216.JH594425_gene2089	1.137e-213	669.0	COG0454@1|root,COG0456@2|Bacteria,1PMA3@1224|Proteobacteria,2TUU2@28211|Alphaproteobacteria,2K0BS@204457|Sphingomonadales	204457|Sphingomonadales	K	acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6879319_6	1449076.JOOE01000001_gene2629	1.657e-15	81.0	COG3239@1|root,COG3239@2|Bacteria,1MVY5@1224|Proteobacteria,2U156@28211|Alphaproteobacteria,2K0CR@204457|Sphingomonadales	204457|Sphingomonadales	I	Fatty acid desaturase	-	-	-	-	-	-	-	-	-	-	-	-	FA_desaturase
SRD3_k127_688963_0	1112212.JH584235_gene3437	0.0	1784.0	COG0726@1|root,COG1215@1|root,COG3858@1|root,COG0726@2|Bacteria,COG1215@2|Bacteria,COG3858@2|Bacteria,1MXG7@1224|Proteobacteria,2TVZ5@28211|Alphaproteobacteria,2K1ER@204457|Sphingomonadales	204457|Sphingomonadales	GM	Polysaccharide deacetylase	-	-	3.5.1.104	ko:K22278	-	-	-	-	ko00000,ko01000	-	-	-	Glyco_hydro_18,Glyco_tranf_2_3,Polysacc_deac_1
SRD3_k127_688963_1	1081640.AGFU01000124_gene46	2.29e-143	467.0	COG3637@1|root,COG3637@2|Bacteria,1R64D@1224|Proteobacteria,2TUMQ@28211|Alphaproteobacteria,2K2EQ@204457|Sphingomonadales	204457|Sphingomonadales	M	Alginate export	-	-	-	-	-	-	-	-	-	-	-	-	Alginate_exp
SRD3_k127_688963_3	1549858.MC45_04015	1.989e-99	332.0	COG0725@1|root,COG0725@2|Bacteria,1MVNA@1224|Proteobacteria,2U5B1@28211|Alphaproteobacteria,2K17W@204457|Sphingomonadales	204457|Sphingomonadales	P	Molybdenum ABC transporter	modA	-	-	ko:K02020	ko02010,map02010	M00189	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.8	-	-	SBP_bac_11
SRD3_k127_688963_2	1379701.JPJC01000032_gene2871	9.373e-121	390.0	COG4149@1|root,COG4149@2|Bacteria,1MUXR@1224|Proteobacteria,2TSYJ@28211|Alphaproteobacteria,2K0AD@204457|Sphingomonadales	204457|Sphingomonadales	P	Molybdate	modB	-	-	ko:K02018	ko02010,map02010	M00189	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.8	-	-	BPD_transp_1
SRD3_k127_688963_4	1090318.ATTI01000001_gene1556	1.554e-72	254.0	COG4148@1|root,COG4148@2|Bacteria,1MU8K@1224|Proteobacteria,2TR1Z@28211|Alphaproteobacteria,2K1F8@204457|Sphingomonadales	204457|Sphingomonadales	P	ABC-type molybdate transport system, ATPase component	modC	-	3.6.3.29	ko:K02017	ko02010,map02010	M00189	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.8	-	-	ABC_tran
SRD3_k127_688963_5	1449076.JOOE01000001_gene2727	1.796e-39	148.0	COG0086@1|root,COG0086@2|Bacteria,1MU3M@1224|Proteobacteria,2TRHV@28211|Alphaproteobacteria,2K1CM@204457|Sphingomonadales	204457|Sphingomonadales	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	rpoC	-	2.7.7.6	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	RNA_pol_Rpb1_1,RNA_pol_Rpb1_2,RNA_pol_Rpb1_3,RNA_pol_Rpb1_4,RNA_pol_Rpb1_5
SRD3_k127_6890045_6	1123269.NX02_01445	3.17e-125	404.0	COG4631@1|root,COG4631@2|Bacteria,1NQSR@1224|Proteobacteria,2TTAB@28211|Alphaproteobacteria,2KEDR@204457|Sphingomonadales	204457|Sphingomonadales	F	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain	-	-	1.17.1.4	ko:K13482	ko00230,ko01100,ko01120,map00230,map01100,map01120	M00546	R01768,R02103	RC00143	ko00000,ko00001,ko00002,ko01000	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2
SRD3_k127_6890045_7	1123269.NX02_01440	4.544e-99	332.0	COG1975@1|root,COG1975@2|Bacteria,1R3RT@1224|Proteobacteria,2TUI0@28211|Alphaproteobacteria,2K9CZ@204457|Sphingomonadales	204457|Sphingomonadales	O	XdhC and CoxI family	-	-	-	ko:K07402	-	-	-	-	ko00000	-	-	-	XdhC_C,XdhC_CoxI
SRD3_k127_6890045_2	1123269.NX02_01435	9.748e-209	657.0	COG0402@1|root,COG0402@2|Bacteria,1MUPT@1224|Proteobacteria,2TU1V@28211|Alphaproteobacteria,2K1K7@204457|Sphingomonadales	204457|Sphingomonadales	F	Guanine deaminase	-	-	3.5.4.3	ko:K01487	ko00230,ko01100,map00230,map01100	-	R01676	RC00204	ko00000,ko00001,ko01000	-	-	-	Amidohydro_1
SRD3_k127_6890045_10	1123269.NX02_12955	2.912e-85	297.0	COG0583@1|root,COG0583@2|Bacteria,1Q0YI@1224|Proteobacteria,2TT5W@28211|Alphaproteobacteria,2K9AG@204457|Sphingomonadales	204457|Sphingomonadales	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SRD3_k127_6890045_9	1123269.NX02_12950	1.346e-95	327.0	COG2153@1|root,COG2153@2|Bacteria,1N90C@1224|Proteobacteria,2UG9D@28211|Alphaproteobacteria,2K8PQ@204457|Sphingomonadales	204457|Sphingomonadales	S	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
SRD3_k127_6890045_5	1112212.JH584235_gene1854	3.727e-130	422.0	COG0384@1|root,COG0384@2|Bacteria,1R9X4@1224|Proteobacteria,2U4TZ@28211|Alphaproteobacteria,2K01E@204457|Sphingomonadales	204457|Sphingomonadales	S	PhzC PhzF	-	-	-	-	-	-	-	-	-	-	-	-	PhzC-PhzF
SRD3_k127_6890045_3	1112216.JH594425_gene1544	1.614e-152	496.0	COG0053@1|root,COG0053@2|Bacteria,1MUDS@1224|Proteobacteria,2TT78@28211|Alphaproteobacteria,2K09U@204457|Sphingomonadales	204457|Sphingomonadales	P	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family	fieF	-	-	ko:K13283	-	-	-	-	ko00000,ko02000	2.A.4.7.1	-	-	Cation_efflux,ZT_dimer
SRD3_k127_6890045_8	1379701.JPJC01000161_gene983	1.173e-98	326.0	COG0259@1|root,COG0259@2|Bacteria,1NZUU@1224|Proteobacteria,2TT1U@28211|Alphaproteobacteria,2K0J3@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP)	pdxH	-	1.4.3.5	ko:K00275	ko00750,ko01100,ko01120,map00750,map01100,map01120	M00124	R00277,R00278,R01710,R01711	RC00048,RC00116	ko00000,ko00001,ko00002,ko01000	-	-	-	PNP_phzG_C,Putative_PNPOx
SRD3_k127_6890045_4	1112212.JH584235_gene1851	8.547e-152	483.0	COG1273@1|root,COG1273@2|Bacteria,1N4UX@1224|Proteobacteria,2TRTI@28211|Alphaproteobacteria,2K1JG@204457|Sphingomonadales	204457|Sphingomonadales	L	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD	ku	-	-	ko:K10979	ko03450,map03450	-	-	-	ko00000,ko00001,ko03400	-	-	-	Ku
SRD3_k127_6890045_0	1112212.JH584235_gene1850	0.0	1297.0	COG1793@1|root,COG3285@1|root,COG1793@2|Bacteria,COG3285@2|Bacteria,1MVWY@1224|Proteobacteria,2TRSZ@28211|Alphaproteobacteria,2K046@204457|Sphingomonadales	204457|Sphingomonadales	L	DNA ligase	ligD	-	6.5.1.1	ko:K01971	ko03450,map03450	-	R00381	RC00005	ko00000,ko00001,ko01000,ko03400	-	-	-	DNA_ligase_A_C,DNA_ligase_A_M,LigD_N
SRD3_k127_6890045_1	1112214.AHIS01000082_gene3651	1.608e-264	820.0	COG2307@1|root,COG2308@1|root,COG2307@2|Bacteria,COG2308@2|Bacteria,1MX5P@1224|Proteobacteria,2TRJE@28211|Alphaproteobacteria,2JZVX@204457|Sphingomonadales	204457|Sphingomonadales	S	Circularly permuted ATP-grasp type 2	-	-	-	-	-	-	-	-	-	-	-	-	Alpha-E,CP_ATPgrasp_2
SRD3_k127_689301_5	439496.RBY4I_696	6.107e-62	242.0	2C7PI@1|root,33VB2@2|Bacteria,1NVD6@1224|Proteobacteria,2URIW@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_689301_4	1174684.EBMC1_09474	1.808e-80	276.0	2FCED@1|root,344HW@2|Bacteria,1RAU4@1224|Proteobacteria,2U617@28211|Alphaproteobacteria,2K46V@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_689301_1	1282360.ABAC460_07705	2.064e-181	590.0	COG3590@1|root,COG3590@2|Bacteria,1MVNQ@1224|Proteobacteria,2TRU4@28211|Alphaproteobacteria,2KEYS@204458|Caulobacterales	204458|Caulobacterales	O	peptidase M13	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M13,Peptidase_M13_N
SRD3_k127_689301_0	1112212.JH584235_gene2990	2.597e-216	679.0	COG0443@1|root,COG0443@2|Bacteria,1MXBT@1224|Proteobacteria,2TS1I@28211|Alphaproteobacteria,2K13U@204457|Sphingomonadales	204457|Sphingomonadales	O	Belongs to the heat shock protein 70 family	-	-	-	ko:K04046	-	-	-	-	ko00000,ko03110	1.A.33	-	-	HSP70,MreB_Mbl
SRD3_k127_689301_2	1123240.ATVO01000010_gene676	3.126e-176	569.0	COG2114@1|root,COG2114@2|Bacteria,1RBTC@1224|Proteobacteria,2TYXP@28211|Alphaproteobacteria,2KDZE@204457|Sphingomonadales	28211|Alphaproteobacteria	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc,HAMP
SRD3_k127_689301_6	1112212.JH584235_gene1149	5.278e-57	203.0	COG0454@1|root,COG0456@2|Bacteria,1RA6D@1224|Proteobacteria,2UC27@28211|Alphaproteobacteria,2K5HT@204457|Sphingomonadales	204457|Sphingomonadales	K	FR47-like protein	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
SRD3_k127_689301_7	392499.Swit_4378	3.863e-50	180.0	COG1393@1|root,COG1393@2|Bacteria,1MZ6S@1224|Proteobacteria,2U98B@28211|Alphaproteobacteria,2K5XC@204457|Sphingomonadales	204457|Sphingomonadales	P	Belongs to the ArsC family	-	-	-	-	-	-	-	-	-	-	-	-	ArsC
SRD3_k127_689301_8	1112216.JH594425_gene3061	1.028e-46	169.0	COG2343@1|root,COG2343@2|Bacteria,1N1K4@1224|Proteobacteria,2UEJ2@28211|Alphaproteobacteria,2K668@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF427)	-	-	-	-	-	-	-	-	-	-	-	-	NTP_transf_9
SRD3_k127_689301_10	1112212.JH584235_gene1145	6.097e-29	118.0	COG1476@1|root,COG1476@2|Bacteria,1N7BB@1224|Proteobacteria,2UGNF@28211|Alphaproteobacteria,2K76G@204457|Sphingomonadales	204457|Sphingomonadales	K	Helix-turn-helix XRE-family like proteins	-	-	-	ko:K07729	-	-	-	-	ko00000,ko03000	-	-	-	HTH_3
SRD3_k127_689301_9	1292034.OR37_00266	2.159e-30	126.0	2EPXY@1|root,33HIG@2|Bacteria,1NK7K@1224|Proteobacteria,2UT5C@28211|Alphaproteobacteria,2KJHS@204458|Caulobacterales	204458|Caulobacterales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_689301_3	1112212.JH584235_gene1143	1.366e-155	494.0	COG0413@1|root,COG0413@2|Bacteria,1MU3B@1224|Proteobacteria,2TQT1@28211|Alphaproteobacteria,2K1CJ@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate	panB	-	2.1.2.11	ko:K00606	ko00770,ko01100,ko01110,map00770,map01100,map01110	M00119	R01226	RC00022,RC00200	ko00000,ko00001,ko00002,ko01000	-	-	-	Pantoate_transf
SRD3_k127_689301_12	1112214.AHIS01000102_gene1527	0.0001268	44.0	COG4649@1|root,COG4649@2|Bacteria,1P2GI@1224|Proteobacteria,2UCFZ@28211|Alphaproteobacteria,2K40C@204457|Sphingomonadales	204457|Sphingomonadales	S	Tetratricopeptide repeat-like domain	-	-	-	-	-	-	-	-	-	-	-	-	TPR_21
SRD3_k127_6938806_4	1090320.KB900605_gene1636	2.525e-08	55.0	COG3971@1|root,COG3971@2|Bacteria,1RB58@1224|Proteobacteria,2U8HR@28211|Alphaproteobacteria,2K0XP@204457|Sphingomonadales	204457|Sphingomonadales	Q	2-keto-4-pentenoate hydratase	-	-	4.2.1.80	ko:K02554	ko00360,ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00360,map00362,map00621,map00622,map01100,map01120,map01220	M00545,M00569	R02601,R04781	RC00750,RC01213	br01602,ko00000,ko00001,ko00002,ko01000	-	-	-	FAA_hydrolase
SRD3_k127_6938806_0	1207055.C100_22075	1.784e-196	621.0	COG2271@1|root,COG2271@2|Bacteria,1MV04@1224|Proteobacteria,2U55E@28211|Alphaproteobacteria,2K0AF@204457|Sphingomonadales	204457|Sphingomonadales	G	Major facilitator superfamily	-	-	-	ko:K08191	-	-	-	-	ko00000,ko02000	2.A.1.14.2	-	-	MFS_1
SRD3_k127_6938806_2	1449076.JOOE01000001_gene2247	5.888e-38	147.0	COG3838@1|root,COG3838@2|Bacteria,1N55M@1224|Proteobacteria,2UD7V@28211|Alphaproteobacteria,2K6KF@204457|Sphingomonadales	204457|Sphingomonadales	U	Type IV secretory pathway, VirB2	-	-	-	-	-	-	-	-	-	-	-	-	TrbC
SRD3_k127_6938806_1	1081640.AGFU01000015_gene2161	8.624e-43	157.0	COG3702@1|root,COG3702@2|Bacteria,1N1YI@1224|Proteobacteria,2UDDW@28211|Alphaproteobacteria,2K6H2@204457|Sphingomonadales	204457|Sphingomonadales	U	Type IV secretory pathway	-	-	-	ko:K03198	ko03070,map03070	M00333	-	-	ko00000,ko00001,ko00002,ko02044	3.A.7	-	-	VirB3
SRD3_k127_6938806_3	69395.JQLZ01000004_gene640	4.623e-18	86.0	COG3451@1|root,COG3451@2|Bacteria,1MXH0@1224|Proteobacteria,2TR1U@28211|Alphaproteobacteria,2KEYI@204458|Caulobacterales	204458|Caulobacterales	U	Type VI secretion protein	-	-	-	ko:K03199	ko03070,map03070	M00333	-	-	ko00000,ko00001,ko00002,ko02044	3.A.7	-	-	CagE_TrbE_VirB
SRD3_k127_6948553_2	452662.SJA_C2-01290	4.662e-75	257.0	2C2HV@1|root,33YYU@2|Bacteria,1RJ8M@1224|Proteobacteria,2U9F2@28211|Alphaproteobacteria,2K4XT@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6948553_0	1335760.ASTG01000019_gene2702	1.68e-145	466.0	COG0491@1|root,COG0491@2|Bacteria,1R5KK@1224|Proteobacteria,2TUS2@28211|Alphaproteobacteria,2K0CV@204457|Sphingomonadales	204457|Sphingomonadales	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
SRD3_k127_6948553_1	194867.ALBQ01000026_gene2120	1.6e-99	330.0	COG4774@1|root,COG4774@2|Bacteria,1R6E9@1224|Proteobacteria,2U3P8@28211|Alphaproteobacteria,2KEGX@204457|Sphingomonadales	204457|Sphingomonadales	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SRD3_k127_6950923_23	1090320.KB900605_gene854	2.393e-58	207.0	COG1629@1|root,COG4771@2|Bacteria,1MWKN@1224|Proteobacteria,2TTFY@28211|Alphaproteobacteria,2K075@204457|Sphingomonadales	204457|Sphingomonadales	P	receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SRD3_k127_6950923_16	1112212.JH584235_gene2455	4.565e-106	347.0	COG1309@1|root,COG1309@2|Bacteria,1RE97@1224|Proteobacteria,2U8N9@28211|Alphaproteobacteria,2K3XR@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SRD3_k127_6950923_27	1112216.JH594425_gene611	3.88e-40	153.0	COG0789@1|root,COG0789@2|Bacteria,1RGYB@1224|Proteobacteria,2UDVH@28211|Alphaproteobacteria,2KD7R@204457|Sphingomonadales	204457|Sphingomonadales	K	MerR HTH family regulatory protein	-	-	-	-	-	-	-	-	-	-	-	-	MerR_1
SRD3_k127_6950923_24	1090320.KB900605_gene857	5.432e-51	182.0	COG0776@1|root,COG0776@2|Bacteria,1RH5Z@1224|Proteobacteria,2UCDG@28211|Alphaproteobacteria,2K62D@204457|Sphingomonadales	204457|Sphingomonadales	K	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control	himA	-	-	ko:K04764	-	-	-	-	ko00000,ko03032,ko03036,ko03400	-	-	-	Bac_DNA_binding
SRD3_k127_6950923_8	1112212.JH584235_gene2589	2.111e-172	547.0	COG0332@1|root,COG0332@2|Bacteria,1MU9N@1224|Proteobacteria,2TR60@28211|Alphaproteobacteria,2K1XQ@204457|Sphingomonadales	204457|Sphingomonadales	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids	fabH	-	2.3.1.180	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00082,M00083	R10707	RC00004,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACP_syn_III,ACP_syn_III_C
SRD3_k127_6950923_7	1112212.JH584235_gene2588	1.413e-188	593.0	COG0416@1|root,COG0416@2|Bacteria,1MVM3@1224|Proteobacteria,2TR53@28211|Alphaproteobacteria,2K0QU@204457|Sphingomonadales	204457|Sphingomonadales	I	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA	plsX	-	2.3.1.15	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R00851,R09380	RC00004,RC00039,RC00041	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	FA_synthesis
SRD3_k127_6950923_29	1549858.MC45_17570	5.88e-32	124.0	COG0333@1|root,COG0333@2|Bacteria,1PU3Y@1224|Proteobacteria,2UF54@28211|Alphaproteobacteria,2K6RY@204457|Sphingomonadales	204457|Sphingomonadales	J	Belongs to the bacterial ribosomal protein bL32 family	rpmF	-	-	ko:K02911	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	-	-	-	Ribosomal_L32p
SRD3_k127_6950923_26	1112212.JH584235_gene2587	1.999e-44	169.0	COG3788@1|root,COG3788@2|Bacteria,1N0G5@1224|Proteobacteria,2UDEJ@28211|Alphaproteobacteria,2K642@204457|Sphingomonadales	204457|Sphingomonadales	S	relative of glutathione S-transferase, MAPEG superfamily	-	-	-	ko:K07136	-	-	-	-	ko00000	-	-	-	MAPEG
SRD3_k127_6950923_13	1112216.JH594425_gene606	4.397e-121	395.0	COG0491@1|root,COG0491@2|Bacteria,1MUDN@1224|Proteobacteria,2TQJ9@28211|Alphaproteobacteria,2K19S@204457|Sphingomonadales	204457|Sphingomonadales	S	COG0491 Zn-dependent hydrolases, including glyoxylases	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
SRD3_k127_6950923_4	1112214.AHIS01000047_gene2114	2.577e-234	739.0	COG0115@1|root,COG0147@1|root,COG0115@2|Bacteria,COG0147@2|Bacteria,1MVBJ@1224|Proteobacteria,2TUBY@28211|Alphaproteobacteria,2K1FB@204457|Sphingomonadales	204457|Sphingomonadales	EH	component I	pabB	-	2.6.1.85,4.1.3.38	ko:K01665,ko:K03342	ko00790,map00790	-	R01716,R05553	RC00010,RC01418,RC01843,RC02148	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_4,Anth_synt_I_N,Chorismate_bind
SRD3_k127_6950923_5	1112212.JH584235_gene2584	2.908e-230	715.0	COG0436@1|root,COG0436@2|Bacteria,1MW0Z@1224|Proteobacteria,2TRPK@28211|Alphaproteobacteria,2K0HJ@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate	aspB	-	2.6.1.1	ko:K00812	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	-	R00355,R00694,R00734,R00896,R02433,R02619,R05052	RC00006	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
SRD3_k127_6950923_30	1112212.JH584235_gene2583	6.125e-05	48.0	29B8A@1|root,2ZY6N@2|Bacteria,1PKMV@1224|Proteobacteria,2UZ9U@28211|Alphaproteobacteria,2K8DH@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6950923_17	1549858.MC45_08050	1.524e-99	336.0	COG0225@1|root,COG0225@2|Bacteria,1NC84@1224|Proteobacteria,2TTDD@28211|Alphaproteobacteria,2K3XP@204457|Sphingomonadales	204457|Sphingomonadales	O	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine	msrA_1	-	1.8.4.11	ko:K07304	-	-	-	-	ko00000,ko01000	-	-	-	PMSR
SRD3_k127_6950923_15	1112216.JH594425_gene174	1.366e-109	357.0	COG1407@1|root,COG1407@2|Bacteria,1RC5G@1224|Proteobacteria,2TU2T@28211|Alphaproteobacteria,2K25E@204457|Sphingomonadales	204457|Sphingomonadales	S	ICC-like phosphoesterases	-	-	-	ko:K06953	-	-	-	-	ko00000	-	-	-	Metallophos
SRD3_k127_6950923_1	1112214.AHIS01000005_gene1813	0.0	1066.0	COG3158@1|root,COG3158@2|Bacteria,1MUVH@1224|Proteobacteria,2TRVJ@28211|Alphaproteobacteria,2K2RD@204457|Sphingomonadales	204457|Sphingomonadales	P	Transport of potassium into the cell	-	-	-	ko:K03549	-	-	-	-	ko00000,ko02000	2.A.72	-	-	K_trans
SRD3_k127_6950923_3	1379701.JPJC01000001_gene2533	4.39e-242	754.0	COG0624@1|root,COG0624@2|Bacteria,1MWJS@1224|Proteobacteria,2TUHT@28211|Alphaproteobacteria,2K1MW@204457|Sphingomonadales	204457|Sphingomonadales	E	Acetylornithine deacetylase Succinyl-diaminopimelate	-	-	-	-	-	-	-	-	-	-	-	-	M20_dimer,Peptidase_M20,Peptidase_M28
SRD3_k127_6950923_19	629773.AORY01000002_gene1559	3.035e-89	304.0	COG3577@1|root,COG3577@2|Bacteria,1MYAD@1224|Proteobacteria,2U9RE@28211|Alphaproteobacteria,2K4GD@204457|Sphingomonadales	204457|Sphingomonadales	S	gag-polyprotein putative aspartyl protease	-	-	-	-	-	-	-	-	-	-	-	-	Asp_protease_2,gag-asp_proteas
SRD3_k127_6950923_20	1449076.JOOE01000003_gene3518	1.836e-83	286.0	COG3577@1|root,COG3577@2|Bacteria,1MYAD@1224|Proteobacteria,2U9RE@28211|Alphaproteobacteria,2K4GD@204457|Sphingomonadales	204457|Sphingomonadales	S	gag-polyprotein putative aspartyl protease	-	-	-	-	-	-	-	-	-	-	-	-	Asp_protease_2,gag-asp_proteas
SRD3_k127_6950923_0	1379701.JPJC01000001_gene2535	0.0	1397.0	COG1201@1|root,COG1201@2|Bacteria,1MUSW@1224|Proteobacteria,2TR7V@28211|Alphaproteobacteria,2K0I6@204457|Sphingomonadales	204457|Sphingomonadales	L	helicase	lhr	-	-	ko:K03724	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DEAD,DEAD_assoc,Helicase_C
SRD3_k127_6950923_6	1112216.JH594425_gene1615	5.363e-196	616.0	COG1236@1|root,COG1236@2|Bacteria,1MV7U@1224|Proteobacteria,2TQU5@28211|Alphaproteobacteria,2K1G9@204457|Sphingomonadales	204457|Sphingomonadales	J	exonuclease of the beta-lactamase fold involved in RNA processing	-	-	-	ko:K07577	-	-	-	-	ko00000	-	-	-	Lactamase_B
SRD3_k127_6950923_28	648885.KB316285_gene2405	2.86e-39	163.0	2EEEQ@1|root,32SYX@2|Bacteria,1R3D3@1224|Proteobacteria,2U00V@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6950923_2	1112212.JH584235_gene1921	1.056e-259	809.0	COG1508@1|root,COG1508@2|Bacteria,1MW4V@1224|Proteobacteria,2TS41@28211|Alphaproteobacteria,2K182@204457|Sphingomonadales	204457|Sphingomonadales	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	rpoN	-	-	ko:K03092	ko02020,ko05111,map02020,map05111	-	-	-	ko00000,ko00001,ko03021	-	-	-	Sigma54_AID,Sigma54_CBD,Sigma54_DBD
SRD3_k127_6950923_9	1112214.AHIS01000005_gene1801	1.66e-140	449.0	COG1137@1|root,COG1137@2|Bacteria,1MU8M@1224|Proteobacteria,2TR7F@28211|Alphaproteobacteria,2K0YX@204457|Sphingomonadales	204457|Sphingomonadales	S	ABC-type (Unclassified) transport system, ATPase component	-	-	-	ko:K06861	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	1.B.42.1	-	-	ABC_tran,BCA_ABC_TP_C
SRD3_k127_6950923_21	1112212.JH584235_gene1923	8.133e-78	263.0	COG1934@1|root,COG1934@2|Bacteria,1MXGA@1224|Proteobacteria,2U6DD@28211|Alphaproteobacteria,2K3YP@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	ko:K09774	-	-	-	-	ko00000,ko02000	1.B.42.1	-	-	OstA
SRD3_k127_6950923_18	1112212.JH584235_gene1924	3.274e-90	301.0	COG5375@1|root,COG5375@2|Bacteria,1NMV8@1224|Proteobacteria,2VCS4@28211|Alphaproteobacteria,2K34V@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein conserved in bacteria	-	-	-	ko:K11719	-	-	-	-	ko00000,ko02000	1.B.42.1	-	-	LptC
SRD3_k127_6950923_14	1090319.KE386571_gene2701	1.9e-115	373.0	COG0349@1|root,COG0349@2|Bacteria,1MWFD@1224|Proteobacteria,2TQXS@28211|Alphaproteobacteria,2K0FG@204457|Sphingomonadales	204457|Sphingomonadales	L	3'-5' exonuclease	-	-	3.1.13.5	ko:K03684	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	DNA_pol_A_exo1
SRD3_k127_6950923_12	1112212.JH584235_gene1926	1.861e-124	403.0	COG0861@1|root,COG0861@2|Bacteria,1MWC9@1224|Proteobacteria,2TTT6@28211|Alphaproteobacteria,2K1P9@204457|Sphingomonadales	204457|Sphingomonadales	P	COG0861 Membrane protein TerC, possibly involved in tellurium resistance	-	-	-	-	-	-	-	-	-	-	-	-	TerC
SRD3_k127_6950923_10	1112216.JH594425_gene1605	4.326e-134	432.0	COG1278@1|root,COG1278@2|Bacteria,1N6Q5@1224|Proteobacteria,2UF6W@28211|Alphaproteobacteria,2JZZ2@204457|Sphingomonadales	204457|Sphingomonadales	K	Cold shock	-	-	-	ko:K03704	-	-	-	-	ko00000,ko03000	-	-	-	CSD
SRD3_k127_6950923_25	983920.Y88_2544	7.367e-50	179.0	COG0526@1|root,COG0526@2|Bacteria,1RJK1@1224|Proteobacteria,2UAQK@28211|Alphaproteobacteria,2K4FP@204457|Sphingomonadales	204457|Sphingomonadales	CO	Thioredoxin-like	-	-	-	-	-	-	-	-	-	-	-	-	Thioredoxin_7
SRD3_k127_6950923_11	1112216.JH594425_gene1634	1.507e-126	410.0	COG0395@1|root,COG0395@2|Bacteria,1REG1@1224|Proteobacteria,2U2QS@28211|Alphaproteobacteria,2K6HY@204457|Sphingomonadales	204457|Sphingomonadales	G	Inward rectifier potassium channel	-	-	-	-	-	-	-	-	-	-	-	-	IRK
SRD3_k127_6950923_22	1449076.JOOE01000003_gene3531	6e-71	244.0	COG0697@1|root,COG0697@2|Bacteria,1R46X@1224|Proteobacteria,2TSE9@28211|Alphaproteobacteria,2K44M@204457|Sphingomonadales	204457|Sphingomonadales	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA,Multi_Drug_Res
SRD3_k127_6983158_0	1112212.JH584235_gene1805	0.0	1158.0	COG1196@1|root,COG1196@2|Bacteria,1MUAQ@1224|Proteobacteria,2TRQG@28211|Alphaproteobacteria,2K02F@204457|Sphingomonadales	204457|Sphingomonadales	D	Required for chromosome condensation and partitioning	smc	-	-	ko:K03529	-	-	-	-	ko00000,ko03036	-	-	-	SMC_N
SRD3_k127_6983158_3	1123269.NX02_05235	2.633e-155	516.0	COG0464@1|root,COG0464@2|Bacteria,1NF48@1224|Proteobacteria,2TV2U@28211|Alphaproteobacteria,2K27J@204457|Sphingomonadales	204457|Sphingomonadales	O	AAA domain (dynein-related subfamily)	-	-	-	-	-	-	-	-	-	-	-	-	AAA
SRD3_k127_6983158_1	1112214.AHIS01000061_gene2802	2.21e-236	737.0	COG4277@1|root,COG4277@2|Bacteria,1MVCV@1224|Proteobacteria,2TT5U@28211|Alphaproteobacteria,2K0AV@204457|Sphingomonadales	204457|Sphingomonadales	S	DNA-binding protein with the helix-hairpin-helix motif	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_6983158_2	1112212.JH584235_gene1801	3.587e-233	734.0	COG1573@1|root,COG1573@2|Bacteria,1MW8T@1224|Proteobacteria,2TSAR@28211|Alphaproteobacteria,2K0Y7@204457|Sphingomonadales	204457|Sphingomonadales	L	Uracil-DNA glycosylase	-	-	3.2.2.27	ko:K21929	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DUF4130,UDG
SRD3_k127_6983158_7	1112216.JH594425_gene1581	5.219e-82	273.0	COG1959@1|root,COG1959@2|Bacteria,1RDA4@1224|Proteobacteria,2U9GW@28211|Alphaproteobacteria,2K4I1@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	Rrf2
SRD3_k127_6983158_8	1112216.JH594425_gene1582	1.607e-64	223.0	COG1970@1|root,COG1970@2|Bacteria,1RHG8@1224|Proteobacteria,2U99Y@28211|Alphaproteobacteria,2K54X@204457|Sphingomonadales	204457|Sphingomonadales	M	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell	mscL	-	-	ko:K03282	-	-	-	-	ko00000,ko02000	1.A.22.1	-	-	MscL
SRD3_k127_6983158_4	1112214.AHIS01000061_gene2807	4.402e-95	314.0	COG1704@1|root,COG1704@2|Bacteria,1MVH0@1224|Proteobacteria,2TRJR@28211|Alphaproteobacteria,2K3WZ@204457|Sphingomonadales	204457|Sphingomonadales	S	LemA family	-	-	-	ko:K03744	-	-	-	-	ko00000	-	-	-	LemA
SRD3_k127_6983158_6	629773.AORY01000017_gene2940	9.185e-83	283.0	COG1512@1|root,COG1512@2|Bacteria,1PB41@1224|Proteobacteria,2TUVD@28211|Alphaproteobacteria,2K1AR@204457|Sphingomonadales	204457|Sphingomonadales	S	Methanol dehydrogenase	-	-	-	ko:K06872	-	-	-	-	ko00000	-	-	-	TPM_phosphatase
SRD3_k127_6983158_5	1112212.JH584235_gene1795	8.876e-83	281.0	COG3762@1|root,COG3762@2|Bacteria,1R61N@1224|Proteobacteria,2U5XG@28211|Alphaproteobacteria,2K470@204457|Sphingomonadales	204457|Sphingomonadales	S	membrane	-	-	-	ko:K08988	-	-	-	-	ko00000	-	-	-	TPM_phosphatase
SRD3_k127_7043260_3	1007104.SUS17_3860	2.665e-74	255.0	COG1214@1|root,COG1214@2|Bacteria,1MXPH@1224|Proteobacteria,2TTM2@28211|Alphaproteobacteria,2K59A@204457|Sphingomonadales	204457|Sphingomonadales	O	peptidase M22	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M22
SRD3_k127_7043260_5	1112216.JH594425_gene1526	7.07e-61	218.0	COG0454@1|root,COG0456@2|Bacteria,1RIE6@1224|Proteobacteria,2UF5C@28211|Alphaproteobacteria,2K616@204457|Sphingomonadales	204457|Sphingomonadales	K	Acetyltransferase	rimI	-	2.3.1.128	ko:K03789	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Acetyltransf_1,Acetyltransf_10
SRD3_k127_7043260_4	1112212.JH584235_gene3352	2.326e-71	244.0	COG4957@1|root,COG4957@2|Bacteria,1RGUW@1224|Proteobacteria,2U99M@28211|Alphaproteobacteria,2K4EY@204457|Sphingomonadales	204457|Sphingomonadales	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	ROS_MUCR
SRD3_k127_7043260_2	1112212.JH584235_gene3351	5.024e-80	270.0	COG0735@1|root,COG0735@2|Bacteria,1RDWJ@1224|Proteobacteria,2U6ZS@28211|Alphaproteobacteria,2K3Z2@204457|Sphingomonadales	204457|Sphingomonadales	K	Belongs to the Fur family	fur	-	-	ko:K03711	-	-	-	-	ko00000,ko03000	-	-	-	FUR
SRD3_k127_7043260_1	1112212.JH584235_gene3350	1.746e-122	398.0	COG0204@1|root,COG0204@2|Bacteria,1N2DG@1224|Proteobacteria,2TT8Q@28211|Alphaproteobacteria,2K221@204457|Sphingomonadales	204457|Sphingomonadales	I	Acyltransferase	-	-	2.3.1.51	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R02241,R09381	RC00004,RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyltransferase
SRD3_k127_7043260_0	1449076.JOOE01000003_gene3231	3.957e-231	721.0	COG0621@1|root,COG0621@2|Bacteria,1MURS@1224|Proteobacteria,2TQN6@28211|Alphaproteobacteria,2K1NH@204457|Sphingomonadales	204457|Sphingomonadales	J	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine	miaB	-	2.8.4.3	ko:K06168	-	-	R10645,R10646,R10647	RC00003,RC00980,RC03221,RC03222	ko00000,ko01000,ko03016	-	-	-	Radical_SAM,TRAM,UPF0004
SRD3_k127_7043260_6	1112212.JH584235_gene3347	3.204e-35	135.0	COG1702@1|root,COG1702@2|Bacteria,1MVDV@1224|Proteobacteria,2TRV3@28211|Alphaproteobacteria,2K21F@204457|Sphingomonadales	204457|Sphingomonadales	T	Phosphate starvation-inducible protein PhoH	-	-	-	ko:K06217	-	-	-	-	ko00000	-	-	-	PhoH
SRD3_k127_7047460_1	1112212.JH584235_gene994	1.681e-211	659.0	COG0504@1|root,COG0504@2|Bacteria,1MUIT@1224|Proteobacteria,2TS4Y@28211|Alphaproteobacteria,2K005@204457|Sphingomonadales	204457|Sphingomonadales	F	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates	pyrG	-	6.3.4.2	ko:K01937	ko00240,ko01100,map00240,map01100	M00052	R00571,R00573	RC00010,RC00074	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_synth_N,GATase
SRD3_k127_7047460_5	1549858.MC45_04285	2.052e-28	123.0	COG1314@1|root,COG1314@2|Bacteria,1N8MF@1224|Proteobacteria,2UCIP@28211|Alphaproteobacteria,2K5YU@204457|Sphingomonadales	204457|Sphingomonadales	U	Preprotein translocase subunit SecG	secG	-	-	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2	-	-	SecG
SRD3_k127_7047460_4	1449076.JOOE01000001_gene1664	7.576e-50	189.0	COG1846@1|root,COG1846@2|Bacteria,1RJNN@1224|Proteobacteria,2UCG5@28211|Alphaproteobacteria,2K543@204457|Sphingomonadales	204457|Sphingomonadales	K	Winged helix DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SRD3_k127_7047460_6	1449076.JOOE01000001_gene1663	9.711e-22	100.0	COG0791@1|root,COG0791@2|Bacteria	2|Bacteria	M	cysteine-type peptidase activity	-	-	-	ko:K21471,ko:K21473	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	-	-	NLPC_P60,SH3_3,SLT
SRD3_k127_7047460_2	1112212.JH584235_gene998	6.043e-164	520.0	COG0002@1|root,COG0002@2|Bacteria,1MVJ6@1224|Proteobacteria,2TRMT@28211|Alphaproteobacteria,2K2G3@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde	argC	-	1.2.1.38	ko:K00145	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	M00028,M00845	R03443	RC00684	ko00000,ko00001,ko00002,ko01000	-	-	-	Semialdhyde_dh
SRD3_k127_7047460_0	1007104.SUS17_118	3.272e-277	858.0	COG0364@1|root,COG0364@2|Bacteria,1MUN0@1224|Proteobacteria,2TQXA@28211|Alphaproteobacteria,2K20G@204457|Sphingomonadales	204457|Sphingomonadales	G	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone	zwf	-	1.1.1.363,1.1.1.49	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	M00004,M00006,M00008	R00835,R02736,R10907	RC00001,RC00066	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	G6PD_C,G6PD_N
SRD3_k127_7047460_3	1112212.JH584235_gene1000	2.901e-122	399.0	COG0363@1|root,COG0363@2|Bacteria,1R5K6@1224|Proteobacteria,2U5C7@28211|Alphaproteobacteria,2JZZT@204457|Sphingomonadales	204457|Sphingomonadales	G	6-phosphogluconolactonase	pgl	-	3.1.1.31	ko:K01057	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	M00004,M00006,M00008	R02035	RC00537	ko00000,ko00001,ko00002,ko01000	-	-	-	Glucosamine_iso
SRD3_k127_7047460_7	1112214.AHIS01000092_gene479	1.024e-17	83.0	COG0129@1|root,COG0129@2|Bacteria,1MU3T@1224|Proteobacteria,2TQNS@28211|Alphaproteobacteria,2K1X3@204457|Sphingomonadales	204457|Sphingomonadales	EG	Belongs to the IlvD Edd family	edd	-	4.2.1.12	ko:K01690	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	M00008	R02036	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	ILVD_EDD
SRD3_k127_7135130_0	1219035.NT2_04_00480	1.43e-158	504.0	COG1894@1|root,COG1894@2|Bacteria,1MV8F@1224|Proteobacteria,2TR1V@28211|Alphaproteobacteria	28211|Alphaproteobacteria	C	Dehydrogenase	fdsB	-	1.6.5.3	ko:K00124,ko:K00335	ko00190,ko00630,ko00680,ko01100,ko01120,ko01200,map00190,map00630,map00680,map01100,map01120,map01200	M00144	R00519,R11945	RC00061,RC02796	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_51K,NADH_4Fe-4S,SLBB
SRD3_k127_7135130_1	983920.Y88_2695	2.148e-53	192.0	COG1905@1|root,COG1905@2|Bacteria,1RHBU@1224|Proteobacteria,2U72T@28211|Alphaproteobacteria,2KAH0@204457|Sphingomonadales	204457|Sphingomonadales	C	Thioredoxin-like [2Fe-2S] ferredoxin	-	-	-	ko:K00127	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	-	R00519	RC02796	ko00000,ko00001	-	-	-	2Fe-2S_thioredx
SRD3_k127_7135130_2	1122612.AUBA01000003_gene1635	3.331e-20	93.0	COG0583@1|root,COG0583@2|Bacteria,1N4P5@1224|Proteobacteria,2TQYX@28211|Alphaproteobacteria,2K3ED@204457|Sphingomonadales	204457|Sphingomonadales	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SRD3_k127_7145058_9	1219049.SP5_033_00110	3.989e-15	75.0	COG2197@1|root,COG2197@2|Bacteria,1QWB3@1224|Proteobacteria,2TWYK@28211|Alphaproteobacteria,2K428@204457|Sphingomonadales	204457|Sphingomonadales	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
SRD3_k127_7145058_2	1112212.JH584235_gene2623	1.128e-195	621.0	COG4251@1|root,COG4251@2|Bacteria,1NSQ1@1224|Proteobacteria,2TSPY@28211|Alphaproteobacteria,2K297@204457|Sphingomonadales	204457|Sphingomonadales	T	CHASE3 domain	-	-	-	-	-	-	-	-	-	-	-	-	CHASE3,HATPase_c,HisKA
SRD3_k127_7145058_4	1550073.JROH01000001_gene591	2.804e-142	455.0	COG0847@1|root,COG0847@2|Bacteria,1RGGD@1224|Proteobacteria,2UA51@28211|Alphaproteobacteria,2K33R@204457|Sphingomonadales	204457|Sphingomonadales	L	Exonuclease	-	-	-	ko:K10857	ko03430,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	RNase_T
SRD3_k127_7145058_1	1449076.JOOE01000004_gene205	1.026e-260	811.0	COG1109@1|root,COG1109@2|Bacteria,1MUA5@1224|Proteobacteria,2TRIJ@28211|Alphaproteobacteria,2K0Q1@204457|Sphingomonadales	204457|Sphingomonadales	G	phosphomannomutase	-	-	5.4.2.8	ko:K01840	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	M00114	R01818	RC00408	ko00000,ko00001,ko00002,ko01000	-	-	-	PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV
SRD3_k127_7145058_8	1081640.AGFU01000071_gene3510	7.398e-23	104.0	COG2214@1|root,COG2214@2|Bacteria,1Q626@1224|Proteobacteria,2VCAT@28211|Alphaproteobacteria,2K76N@204457|Sphingomonadales	204457|Sphingomonadales	O	DnaJ molecular chaperone homology domain	-	-	-	-	-	-	-	-	-	-	-	-	DnaJ
SRD3_k127_7145058_5	1112214.AHIS01000047_gene2147	1.166e-139	448.0	COG1192@1|root,COG1192@2|Bacteria,1MVKR@1224|Proteobacteria,2TRZY@28211|Alphaproteobacteria,2K06A@204457|Sphingomonadales	204457|Sphingomonadales	D	involved in chromosome partitioning	-	-	-	ko:K03496	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	MipZ
SRD3_k127_7145058_6	1090320.KB900605_gene819	3.585e-133	429.0	COG0414@1|root,COG0414@2|Bacteria,1MV1S@1224|Proteobacteria,2TS2D@28211|Alphaproteobacteria,2K0S2@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate	panC	-	6.3.2.1	ko:K01918	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	M00119	R02473	RC00096,RC00141	ko00000,ko00001,ko00002,ko01000	-	-	-	Pantoate_ligase
SRD3_k127_7145058_7	1112216.JH594425_gene1272	5.406e-38	147.0	COG0790@1|root,COG0790@2|Bacteria,1N8SR@1224|Proteobacteria,2UFFQ@28211|Alphaproteobacteria,2K5VX@204457|Sphingomonadales	204457|Sphingomonadales	S	FOG TPR repeat, SEL1 subfamily	-	-	-	ko:K07126	-	-	-	-	ko00000	-	-	-	Sel1
SRD3_k127_7145058_0	1112214.AHIS01000047_gene2150	0.0	1491.0	COG0550@1|root,COG1754@1|root,COG0550@2|Bacteria,COG1754@2|Bacteria,1MUFZ@1224|Proteobacteria,2TRGN@28211|Alphaproteobacteria,2K2HN@204457|Sphingomonadales	204457|Sphingomonadales	L	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone	topA	-	5.99.1.2	ko:K03168	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	Topoisom_bac,Toprim,Toprim_C_rpt,zf-C4_Topoisom
SRD3_k127_7145058_3	1112212.JH584235_gene2632	2.633e-156	497.0	COG0758@1|root,COG0758@2|Bacteria,1MVF6@1224|Proteobacteria,2TRQE@28211|Alphaproteobacteria,2K08N@204457|Sphingomonadales	204457|Sphingomonadales	LU	Rossmann fold nucleotide-binding protein involved in DNA uptake	dprA	-	-	ko:K04096	-	-	-	-	ko00000	-	-	-	DNA_processg_A
SRD3_k127_7182047_5	1090318.ATTI01000001_gene2446	1.569e-101	334.0	COG1312@1|root,COG1312@2|Bacteria,1MWYD@1224|Proteobacteria,2TTDI@28211|Alphaproteobacteria,2K1XS@204457|Sphingomonadales	204457|Sphingomonadales	G	Catalyzes the dehydration of D-mannonate	uxuA	-	4.2.1.8	ko:K01686	ko00040,ko01100,map00040,map01100	M00061	R05606	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	UxuA
SRD3_k127_7182047_4	194867.ALBQ01000011_gene175	7.055e-212	666.0	COG4188@1|root,COG4188@2|Bacteria,1MW6H@1224|Proteobacteria,2TTRH@28211|Alphaproteobacteria,2K3TE@204457|Sphingomonadales	204457|Sphingomonadales	S	Platelet-activating factor acetylhydrolase, isoform II	-	-	-	-	-	-	-	-	-	-	-	-	PAF-AH_p_II
SRD3_k127_7182047_1	1219049.SP5_061_00060	0.0	1017.0	COG1629@1|root,COG4771@2|Bacteria,1MWKN@1224|Proteobacteria,2TU3F@28211|Alphaproteobacteria,2K1H6@204457|Sphingomonadales	204457|Sphingomonadales	P	TonB-dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SRD3_k127_7182047_6	190650.CC_0986	8.384e-95	318.0	COG2186@1|root,COG2186@2|Bacteria,1MY44@1224|Proteobacteria,2VF5C@28211|Alphaproteobacteria,2KK5F@204458|Caulobacterales	204458|Caulobacterales	K	FCD	-	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SRD3_k127_7182047_0	1219049.SP5_061_00050	0.0	1289.0	COG1501@1|root,COG1501@2|Bacteria,1MWNJ@1224|Proteobacteria,2U1U0@28211|Alphaproteobacteria,2K175@204457|Sphingomonadales	204457|Sphingomonadales	G	Galactose mutarotase-like	-	-	-	-	-	-	-	-	-	-	-	-	Gal_mutarotas_2,Glyco_hydro_31
SRD3_k127_7182047_3	1112214.AHIS01000006_gene253	1.317e-224	702.0	COG2271@1|root,COG2271@2|Bacteria,1MV04@1224|Proteobacteria,2U253@28211|Alphaproteobacteria,2K1NR@204457|Sphingomonadales	204457|Sphingomonadales	G	Major Facilitator Superfamily	-	-	-	ko:K08191	-	-	-	-	ko00000,ko02000	2.A.1.14.2	-	-	MFS_1
SRD3_k127_7182047_7	1380350.JIAP01000014_gene3590	1.54e-73	265.0	COG0079@1|root,COG0079@2|Bacteria	2|Bacteria	E	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily	hisB	-	2.9.1.1,3.1.3.15,4.1.1.81,4.2.1.19	ko:K01042,ko:K01089,ko:K04720	ko00340,ko00450,ko00860,ko00970,ko01100,ko01110,ko01230,map00340,map00450,map00860,map00970,map01100,map01110,map01230	M00026	R03013,R03457,R06530,R08219	RC00017,RC00517,RC00932,RC01246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acetyltransf_1,Aminotran_1_2,IGPD
SRD3_k127_7182047_2	13690.CP98_01448	3.882e-257	803.0	COG2303@1|root,COG2303@2|Bacteria,1MV19@1224|Proteobacteria,2TQKQ@28211|Alphaproteobacteria,2K32A@204457|Sphingomonadales	204457|Sphingomonadales	E	GMC oxidoreductase	-	-	1.1.99.1	ko:K00108	ko00260,ko01100,map00260,map01100	M00555	R01025	RC00087	ko00000,ko00001,ko00002,ko01000	-	-	-	GMC_oxred_C,GMC_oxred_N
SRD3_k127_7182047_8	745310.G432_01685	8.269e-50	177.0	COG2987@1|root,COG2987@2|Bacteria,1MU4W@1224|Proteobacteria,2TSJR@28211|Alphaproteobacteria,2K2BT@204457|Sphingomonadales	204457|Sphingomonadales	E	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate	hutU	-	4.2.1.49	ko:K01712	ko00340,ko01100,map00340,map01100	M00045	R02914	RC00804	ko00000,ko00001,ko00002,ko01000	-	-	-	Urocanase,Urocanase_C,Urocanase_N
SRD3_k127_7185924_1	1112212.JH584235_gene837	2.125e-131	422.0	COG1207@1|root,COG1207@2|Bacteria,1MUPH@1224|Proteobacteria,2TQPS@28211|Alphaproteobacteria,2K246@204457|Sphingomonadales	204457|Sphingomonadales	M	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain	glmU	-	2.3.1.157,2.7.7.23	ko:K04042	ko00520,ko01100,ko01130,map00520,map01100,map01130	M00362	R00416,R05332	RC00002,RC00004,RC00166	ko00000,ko00001,ko00002,ko01000	-	-	-	Hexapep,Hexapep_2,NTP_transf_3
SRD3_k127_7185924_0	1112212.JH584235_gene836	0.0	1136.0	COG0449@1|root,COG0449@2|Bacteria,1MW4K@1224|Proteobacteria,2TQPM@28211|Alphaproteobacteria,2K017@204457|Sphingomonadales	204457|Sphingomonadales	M	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source	glmS	-	2.6.1.16	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	-	R00768	RC00010,RC00163,RC02752	ko00000,ko00001,ko01000,ko01002	-	-	-	GATase_6,SIS
SRD3_k127_7185924_2	1449076.JOOE01000001_gene2711	2.219e-129	436.0	COG5010@1|root,COG5010@2|Bacteria,1NSGE@1224|Proteobacteria,2UP1Y@28211|Alphaproteobacteria,2K29Y@204457|Sphingomonadales	204457|Sphingomonadales	U	COG0457 FOG TPR repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_7185924_3	1219049.SP5_034_00370	2.132e-39	147.0	COG1629@1|root,COG1629@2|Bacteria,1QVGQ@1224|Proteobacteria,2TWFU@28211|Alphaproteobacteria,2KETH@204457|Sphingomonadales	204457|Sphingomonadales	P	transport	-	-	-	-	-	-	-	-	-	-	-	-	Plug
SRD3_k127_723917_4	1112212.JH584235_gene877	3e-123	398.0	COG0052@1|root,COG0052@2|Bacteria,1MU33@1224|Proteobacteria,2TRXE@28211|Alphaproteobacteria,2K0DP@204457|Sphingomonadales	204457|Sphingomonadales	J	Belongs to the universal ribosomal protein uS2 family	rpsB	-	-	ko:K02967	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S2
SRD3_k127_723917_2	1112212.JH584235_gene876	1.935e-162	517.0	COG0264@1|root,COG0264@2|Bacteria,1MUS2@1224|Proteobacteria,2TQM0@28211|Alphaproteobacteria,2JZY1@204457|Sphingomonadales	204457|Sphingomonadales	J	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome	tsf	-	-	ko:K02357	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	EF_TS
SRD3_k127_723917_5	13690.CP98_01390	1.67e-122	396.0	COG0528@1|root,COG0528@2|Bacteria,1MV3N@1224|Proteobacteria,2TQYN@28211|Alphaproteobacteria,2K1B1@204457|Sphingomonadales	204457|Sphingomonadales	F	Catalyzes the reversible phosphorylation of UMP to UDP	pyrH	-	2.7.4.22	ko:K09903	ko00240,ko01100,map00240,map01100	-	R00158	RC00002	ko00000,ko00001,ko01000	-	-	-	AA_kinase
SRD3_k127_723917_8	1081640.AGFU01000032_gene2408	3.417e-103	339.0	COG0233@1|root,COG0233@2|Bacteria,1N66T@1224|Proteobacteria,2U5B2@28211|Alphaproteobacteria,2K00Z@204457|Sphingomonadales	204457|Sphingomonadales	J	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another	frr	-	-	ko:K02838	-	-	-	-	ko00000,ko03012	-	-	-	RRF
SRD3_k127_723917_6	1112212.JH584235_gene873	3.289e-122	396.0	COG0020@1|root,COG0020@2|Bacteria,1MVP1@1224|Proteobacteria,2TTVJ@28211|Alphaproteobacteria,2K0JM@204457|Sphingomonadales	204457|Sphingomonadales	I	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids	uppS	-	2.5.1.31	ko:K00806	ko00900,ko01110,map00900,map01110	-	R06447	RC00279,RC02839	ko00000,ko00001,ko01000,ko01006	-	-	-	Prenyltransf
SRD3_k127_723917_7	1112216.JH594425_gene2891	2.517e-108	362.0	COG0575@1|root,COG0575@2|Bacteria,1MWSV@1224|Proteobacteria,2U9ED@28211|Alphaproteobacteria,2K1ET@204457|Sphingomonadales	204457|Sphingomonadales	I	Belongs to the CDS family	cdsA	-	2.7.7.41	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	M00093	R01799	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_1
SRD3_k127_723917_1	1112214.AHIS01000095_gene723	2.107e-188	601.0	COG0743@1|root,COG0743@2|Bacteria,1MU4G@1224|Proteobacteria,2TSD1@28211|Alphaproteobacteria,2K0YA@204457|Sphingomonadales	204457|Sphingomonadales	I	Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)	dxr	-	1.1.1.267	ko:K00099	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05688	RC01452	ko00000,ko00001,ko00002,ko01000	-	-	-	DXPR_C,DXP_redisom_C,DXP_reductoisom
SRD3_k127_723917_3	1090319.KE386571_gene1019	1.958e-160	516.0	COG0750@1|root,COG0750@2|Bacteria,1MU91@1224|Proteobacteria,2TQXJ@28211|Alphaproteobacteria,2K0AZ@204457|Sphingomonadales	204457|Sphingomonadales	M	zinc metalloprotease	rseP	-	-	ko:K11749	ko02024,ko04112,map02024,map04112	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	PDZ,PDZ_2,Peptidase_M50
SRD3_k127_723917_0	1112212.JH584235_gene869	0.0	1449.0	COG4775@1|root,COG4775@2|Bacteria,1MU0D@1224|Proteobacteria,2TR7W@28211|Alphaproteobacteria,2K0GI@204457|Sphingomonadales	204457|Sphingomonadales	M	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	bamA	-	-	ko:K07277	-	-	-	-	ko00000,ko02000,ko03029	1.B.33	-	-	Bac_surface_Ag,POTRA
SRD3_k127_723917_10	1112216.JH594425_gene2895	2.483e-40	158.0	COG2825@1|root,COG2825@2|Bacteria,1NFPH@1224|Proteobacteria,2UHDW@28211|Alphaproteobacteria,2K49A@204457|Sphingomonadales	204457|Sphingomonadales	M	Outer membrane protein (OmpH-like)	-	-	-	-	-	-	-	-	-	-	-	-	OmpH
SRD3_k127_723917_9	1112212.JH584235_gene867	7.573e-76	260.0	COG0764@1|root,COG0764@2|Bacteria,1RH2T@1224|Proteobacteria,2U7G4@28211|Alphaproteobacteria,2K4JA@204457|Sphingomonadales	204457|Sphingomonadales	I	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs	fabZ	-	4.2.1.59	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04428,R04535,R04537,R04544,R04568,R04954,R04965,R07764,R10117,R10121	RC00831,RC01095	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	FabA
SRD3_k127_723917_11	1470591.BW41_03175	8.661e-40	149.0	COG0254@1|root,COG0254@2|Bacteria,1MZ69@1224|Proteobacteria,2UBSC@28211|Alphaproteobacteria,2K643@204457|Sphingomonadales	204457|Sphingomonadales	J	50S ribosomal protein L31	rpmE	-	-	ko:K02909	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L31
SRD3_k127_7254304_0	1112212.JH584235_gene1263	2.259e-69	241.0	COG0578@1|root,COG0578@2|Bacteria,1MUMY@1224|Proteobacteria,2TU11@28211|Alphaproteobacteria,2K0SB@204457|Sphingomonadales	204457|Sphingomonadales	C	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family	glpD	-	1.1.5.3	ko:K00111	ko00564,ko01110,map00564,map01110	-	R00848	RC00029	ko00000,ko00001,ko01000	-	-	-	DAO,DAO_C
SRD3_k127_7254304_1	983920.Y88_3532	8.333e-53	200.0	COG1835@1|root,COG1835@2|Bacteria	2|Bacteria	I	transferase activity, transferring acyl groups other than amino-acyl groups	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
SRD3_k127_7272959_2	685778.AORL01000010_gene2680	5.119e-199	640.0	COG1472@1|root,COG1472@2|Bacteria,1MVIV@1224|Proteobacteria,2TS28@28211|Alphaproteobacteria,2JZVY@204457|Sphingomonadales	204457|Sphingomonadales	G	Belongs to the glycosyl hydrolase 3 family	-	-	3.2.1.21	ko:K05349	ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110	-	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko01000	-	GH3	-	Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C
SRD3_k127_7272959_0	745310.G432_12115	0.0	1074.0	COG3661@1|root,COG3661@2|Bacteria,1MXKA@1224|Proteobacteria,2U0WK@28211|Alphaproteobacteria,2JZXC@204457|Sphingomonadales	204457|Sphingomonadales	G	Belongs to the glycosyl hydrolase 67 family	-	-	3.2.1.139	ko:K01235	-	-	-	-	ko00000,ko01000	-	-	-	Glyco_hydro_67C,Glyco_hydro_67M,Glyco_hydro_67N
SRD3_k127_7272959_3	745310.G432_12125	4.2e-159	508.0	COG1609@1|root,COG1609@2|Bacteria,1MVUR@1224|Proteobacteria,2TUNV@28211|Alphaproteobacteria,2K2P2@204457|Sphingomonadales	204457|Sphingomonadales	K	helix_turn _helix lactose operon repressor	-	-	-	ko:K02529	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_3
SRD3_k127_7272959_1	1549858.MC45_12715	0.0	1051.0	COG0129@1|root,COG0129@2|Bacteria,1MV4I@1224|Proteobacteria,2TQRW@28211|Alphaproteobacteria,2K1SK@204457|Sphingomonadales	204457|Sphingomonadales	EG	Belongs to the IlvD Edd family	-	-	4.2.1.82	ko:K22186	ko00040,map00040	-	R02429	RC00543	ko00000,ko00001,ko01000	-	-	-	ILVD_EDD
SRD3_k127_7272959_4	1550073.JROH01000009_gene1359	3.341e-63	220.0	COG3507@1|root,COG3507@2|Bacteria,1NNX4@1224|Proteobacteria,2U06C@28211|Alphaproteobacteria,2K1S9@204457|Sphingomonadales	204457|Sphingomonadales	G	Belongs to the glycosyl hydrolase 43 family	-	-	3.2.1.37,3.2.1.55	ko:K01198,ko:K01209	ko00520,ko01100,map00520,map01100	-	R01433,R01762	RC00467	ko00000,ko00001,ko01000	-	GH43,GH51	-	Glyco_hydro_43
SRD3_k127_7296891_0	194867.ALBQ01000014_gene659	1.353e-260	809.0	COG1643@1|root,COG1643@2|Bacteria,1MUEQ@1224|Proteobacteria,2TRMJ@28211|Alphaproteobacteria,2K0GM@204457|Sphingomonadales	204457|Sphingomonadales	L	ATP-dependent helicase	hrpB	-	3.6.4.13	ko:K03579	-	-	-	-	ko00000,ko01000	-	-	-	DEAD,HA2,Helicase_C,HrpB_C
SRD3_k127_7296891_2	1112212.JH584235_gene1790	6.603e-133	437.0	COG1230@1|root,COG1230@2|Bacteria,1MVQB@1224|Proteobacteria,2TR65@28211|Alphaproteobacteria,2JZZ1@204457|Sphingomonadales	204457|Sphingomonadales	P	cation diffusion facilitator family transporter	-	-	-	-	-	-	-	-	-	-	-	-	Cation_efflux
SRD3_k127_7296891_7	1449076.JOOE01000003_gene3321	1.05e-44	164.0	COG2827@1|root,COG2827@2|Bacteria,1MZME@1224|Proteobacteria,2UCNX@28211|Alphaproteobacteria,2K5XX@204457|Sphingomonadales	204457|Sphingomonadales	L	endonuclease containing a URI domain	-	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
SRD3_k127_7296891_1	1112212.JH584235_gene1788	4.394e-189	597.0	COG0142@1|root,COG0142@2|Bacteria,1MUK6@1224|Proteobacteria,2TSDZ@28211|Alphaproteobacteria,2JZY9@204457|Sphingomonadales	204457|Sphingomonadales	H	Belongs to the FPP GGPP synthase family	-	-	2.5.1.90	ko:K02523	ko00900,ko01110,map00900,map01110	-	R09248	RC00279	ko00000,ko00001,ko01000,ko01006	-	-	-	polyprenyl_synt
SRD3_k127_7296891_6	1112214.AHIS01000019_gene1207	1.309e-47	171.0	COG1605@1|root,COG1605@2|Bacteria,1MZTQ@1224|Proteobacteria,2UCMC@28211|Alphaproteobacteria,2K610@204457|Sphingomonadales	204457|Sphingomonadales	E	chorismate mutase	-	-	5.4.99.5	ko:K04092	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00024,M00025	R01715	RC03116	ko00000,ko00001,ko00002,ko01000	-	-	-	CM_2
SRD3_k127_7296891_4	1123257.AUFV01000008_gene766	6.672e-72	253.0	COG0491@1|root,COG0491@2|Bacteria,1PHBX@1224|Proteobacteria,1S357@1236|Gammaproteobacteria	1236|Gammaproteobacteria	S	Metallo-beta-lactamase superfamily	-	-	3.1.1.81	ko:K13075	ko02024,map02024	-	R08970	RC00713	ko00000,ko00001,ko01000	-	-	-	Lactamase_B
SRD3_k127_7296891_9	1121015.N789_13210	6.102e-17	83.0	291FY@1|root,2ZP2R@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_7296891_5	1163407.UU7_07408	6.627e-58	206.0	COG0346@1|root,COG0346@2|Bacteria,1RE6F@1224|Proteobacteria,1SP6R@1236|Gammaproteobacteria,1X75F@135614|Xanthomonadales	135614|Xanthomonadales	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
SRD3_k127_7296891_8	509190.Cseg_3302	1.877e-31	142.0	2DTBX@1|root,33JMN@2|Bacteria,1NPA4@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_7296891_3	1163671.JAGI01000002_gene2309	5.489e-83	294.0	COG1404@1|root,COG1404@2|Bacteria,1TQ2M@1239|Firmicutes,24CD5@186801|Clostridia,36JX7@31979|Clostridiaceae	186801|Clostridia	O	PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin	-	-	3.4.21.66	ko:K08651,ko:K13274,ko:K14645,ko:K20486	ko02020,ko02024,map02020,map02024	-	-	-	ko00000,ko00001,ko01000,ko01002,ko03110	-	-	-	Big_2,CW_binding_2,ChW,Peptidase_S8,SLH
SRD3_k127_7312638_2	1112214.AHIS01000047_gene2009	1.106e-26	109.0	COG1199@1|root,COG1199@2|Bacteria,1MVCU@1224|Proteobacteria,2TUKS@28211|Alphaproteobacteria,2K15X@204457|Sphingomonadales	204457|Sphingomonadales	KL	Helicase	dinG	-	3.6.4.12	ko:K03722	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	Helicase_C_2
SRD3_k127_7312638_0	1090320.KB900605_gene1113	3.563e-295	912.0	COG1384@1|root,COG1384@2|Bacteria,1MV32@1224|Proteobacteria,2TQYH@28211|Alphaproteobacteria,2K1S0@204457|Sphingomonadales	204457|Sphingomonadales	J	Belongs to the class-I aminoacyl-tRNA synthetase family	lysS	-	6.1.1.6	ko:K04566	ko00970,map00970	M00360	R03658	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_1f
SRD3_k127_7312638_1	1081640.AGFU01000008_gene993	3.224e-122	398.0	COG0330@1|root,COG0330@2|Bacteria,1RFUA@1224|Proteobacteria,2U7P0@28211|Alphaproteobacteria,2K29N@204457|Sphingomonadales	204457|Sphingomonadales	O	SPFH domain / Band 7 family	-	-	-	-	-	-	-	-	-	-	-	-	Band_7
SRD3_k127_7410647_0	1112212.JH584235_gene3169	0.0	1435.0	COG2844@1|root,COG2844@2|Bacteria,1MV54@1224|Proteobacteria,2TSV0@28211|Alphaproteobacteria,2K0BN@204457|Sphingomonadales	204457|Sphingomonadales	O	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen	glnD	-	2.7.7.59	ko:K00990	ko02020,map02020	-	-	-	ko00000,ko00001,ko01000	-	-	-	DUF294,GlnD_UR_UTase,HD
SRD3_k127_7410647_2	1219049.SP5_015_00320	4.603e-06	51.0	COG1104@1|root,COG1104@2|Bacteria,1MU1C@1224|Proteobacteria,2TSQE@28211|Alphaproteobacteria,2K05P@204457|Sphingomonadales	204457|Sphingomonadales	E	overlaps another CDS with the same product name	-	-	2.8.1.7	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	-	R07460,R11528,R11529	RC01789,RC02313	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	-	-	-	Aminotran_5
SRD3_k127_7410647_1	1219049.SP5_102_00300	3.313e-52	185.0	COG0249@1|root,COG0249@2|Bacteria,1MUGX@1224|Proteobacteria,2TQRR@28211|Alphaproteobacteria,2K09S@204457|Sphingomonadales	204457|Sphingomonadales	L	that it carries out the mismatch recognition step. This protein has a weak ATPase activity	mutS	-	-	ko:K03555	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	MutS_I,MutS_II,MutS_III,MutS_IV,MutS_V
SRD3_k127_741252_3	1088721.NSU_2889	0.0002031	44.0	COG0052@1|root,COG0052@2|Bacteria,1MU33@1224|Proteobacteria,2TRXE@28211|Alphaproteobacteria,2K0DP@204457|Sphingomonadales	204457|Sphingomonadales	J	Belongs to the universal ribosomal protein uS2 family	rpsB	-	-	ko:K02967	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S2
SRD3_k127_741252_1	1112214.AHIS01000095_gene730	3.79e-113	376.0	COG1183@1|root,COG1183@2|Bacteria,1MWD9@1224|Proteobacteria,2TUF7@28211|Alphaproteobacteria,2K1B9@204457|Sphingomonadales	204457|Sphingomonadales	I	Belongs to the CDP-alcohol phosphatidyltransferase class-I family	pssA	-	2.7.8.8	ko:K17103	ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110	M00093	R01800	RC00002,RC00017,RC02795	ko00000,ko00001,ko00002,ko01000	-	-	-	CDP-OH_P_tran_2,CDP-OH_P_transf
SRD3_k127_741252_0	1112212.JH584235_gene879	7.878e-126	406.0	COG0688@1|root,COG0688@2|Bacteria,1MW45@1224|Proteobacteria,2TRMG@28211|Alphaproteobacteria,2K019@204457|Sphingomonadales	204457|Sphingomonadales	I	Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)	psd	-	4.1.1.65	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	M00093	R02055	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	PS_Dcarbxylase
SRD3_k127_741252_2	1090318.ATTI01000001_gene1796	5.409e-84	283.0	COG0538@1|root,COG0538@2|Bacteria,1MUIB@1224|Proteobacteria,2TQWD@28211|Alphaproteobacteria,2K05F@204457|Sphingomonadales	204457|Sphingomonadales	C	Belongs to the isocitrate and isopropylmalate dehydrogenases family	icd	-	1.1.1.42	ko:K00031	ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	M00009,M00010,M00173,M00740	R00267,R00268,R01899	RC00001,RC00084,RC00114,RC00626,RC02801	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Iso_dh
SRD3_k127_7428700_1	1112216.JH594425_gene1963	2.771e-219	697.0	COG0161@1|root,COG0161@2|Bacteria,1MU2N@1224|Proteobacteria,2TQND@28211|Alphaproteobacteria,2K04K@204457|Sphingomonadales	204457|Sphingomonadales	E	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	bioA	-	2.6.1.62	ko:K00833	ko00780,ko01100,map00780,map01100	M00123,M00573,M00577	R03231	RC00006,RC00887	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3
SRD3_k127_7428700_10	1112212.JH584235_gene1184	2.251e-89	309.0	COG0132@1|root,COG0132@2|Bacteria,1RDRK@1224|Proteobacteria,2U5AJ@28211|Alphaproteobacteria,2K151@204457|Sphingomonadales	204457|Sphingomonadales	H	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring	bioD	-	2.1.1.197,6.3.3.3	ko:K01935,ko:K02169	ko00780,ko01100,map00780,map01100	M00123,M00572,M00573,M00577	R03182,R09543	RC00003,RC00460,RC00868	ko00000,ko00001,ko00002,ko01000	-	-	-	AAA_26
SRD3_k127_7428700_5	1112212.JH584235_gene1183	3.021e-166	531.0	COG0156@1|root,COG0156@2|Bacteria,1MVVH@1224|Proteobacteria,2TTAK@28211|Alphaproteobacteria,2JZVV@204457|Sphingomonadales	204457|Sphingomonadales	E	8-amino-7-oxononanoate synthase	bioF	-	2.3.1.47	ko:K00652	ko00780,ko01100,map00780,map01100	M00123,M00573,M00577	R03210,R10124	RC00004,RC00039,RC02725	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
SRD3_k127_7428700_11	685778.AORL01000009_gene3352	3.404e-31	130.0	2AKT1@1|root,31BK2@2|Bacteria,1NXBB@1224|Proteobacteria,2UTRK@28211|Alphaproteobacteria,2K5KP@204457|Sphingomonadales	204457|Sphingomonadales	S	PilZ domain	-	-	-	-	-	-	-	-	-	-	-	-	PilZ
SRD3_k127_7428700_0	69395.JQLZ01000002_gene1324	1.125e-290	902.0	COG3507@1|root,COG3507@2|Bacteria,1NNX4@1224|Proteobacteria,2U06C@28211|Alphaproteobacteria,2KHNU@204458|Caulobacterales	204458|Caulobacterales	G	Belongs to the glycosyl hydrolase 43 family	-	-	3.2.1.37	ko:K01198	ko00520,ko01100,map00520,map01100	-	R01433	RC00467	ko00000,ko00001,ko01000	-	GH43	-	Glyco_hydro_43
SRD3_k127_7428700_3	1346791.M529_07980	3.648e-199	628.0	COG2271@1|root,COG2271@2|Bacteria,1MV04@1224|Proteobacteria,2U253@28211|Alphaproteobacteria,2K1NR@204457|Sphingomonadales	204457|Sphingomonadales	G	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SRD3_k127_7428700_7	1112212.JH584235_gene3548	2.684e-130	427.0	COG1714@1|root,COG1714@2|Bacteria,1RAZN@1224|Proteobacteria,2U6W9@28211|Alphaproteobacteria,2K24C@204457|Sphingomonadales	204457|Sphingomonadales	S	RDD family	-	-	-	-	-	-	-	-	-	-	-	-	RDD
SRD3_k127_7428700_6	1112212.JH584235_gene3547	1.244e-158	506.0	COG1300@1|root,COG1300@2|Bacteria,1Q1GN@1224|Proteobacteria,2U06S@28211|Alphaproteobacteria,2JZZD@204457|Sphingomonadales	204457|Sphingomonadales	S	membrane	-	-	-	-	-	-	-	-	-	-	-	-	SpoIIM
SRD3_k127_7428700_2	1112212.JH584235_gene3546	4.243e-202	647.0	COG1721@1|root,COG1721@2|Bacteria,1MXDI@1224|Proteobacteria,2TU87@28211|Alphaproteobacteria,2K038@204457|Sphingomonadales	204457|Sphingomonadales	S	conserved protein (some members contain a von Willebrand factor type A (vWA) domain)	-	-	-	-	-	-	-	-	-	-	-	-	DUF58
SRD3_k127_7428700_4	1112214.AHIS01000063_gene2764	1.857e-169	549.0	COG0714@1|root,COG0714@2|Bacteria,1MUFN@1224|Proteobacteria,2TR0T@28211|Alphaproteobacteria,2K1NZ@204457|Sphingomonadales	204457|Sphingomonadales	S	ATPase family associated with various cellular activities (AAA)	-	-	-	ko:K03924	-	-	-	-	ko00000,ko01000	-	-	-	AAA_3
SRD3_k127_7428700_9	745310.G432_14190	3.872e-92	319.0	2952T@1|root,2ZSFJ@2|Bacteria,1RGF9@1224|Proteobacteria,2U83E@28211|Alphaproteobacteria,2K2TA@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_7428700_8	1112212.JH584235_gene3543	4.712e-100	332.0	2C58E@1|root,32V5I@2|Bacteria,1N13T@1224|Proteobacteria,2UBSB@28211|Alphaproteobacteria,2K675@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4129
SRD3_k127_7428700_12	46429.BV95_04101	6.949e-05	48.0	2E7B7@1|root,331UM@2|Bacteria,1N6KN@1224|Proteobacteria,2UD50@28211|Alphaproteobacteria,2K5JV@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_7431111_0	1112212.JH584235_gene2066	3.779e-218	680.0	COG0317@1|root,COG0317@2|Bacteria,1MU44@1224|Proteobacteria,2TQNY@28211|Alphaproteobacteria,2K15Q@204457|Sphingomonadales	204457|Sphingomonadales	KT	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance	-	-	2.7.6.5,3.1.7.2	ko:K00951,ko:K01139	ko00230,map00230	-	R00336,R00429	RC00002,RC00078	ko00000,ko00001,ko01000,ko03009	-	-	-	ACT_4,HD_4,RelA_SpoT,TGS
SRD3_k127_7431111_1	264203.ZMO0378	9.492e-15	88.0	COG2963@1|root,COG2963@2|Bacteria,1N24I@1224|Proteobacteria,2UGNR@28211|Alphaproteobacteria,2KB03@204457|Sphingomonadales	204457|Sphingomonadales	L	transposase activity	-	-	-	-	-	-	-	-	-	-	-	-	HTH_23
SRD3_k127_7472526_7	1123504.JQKD01000006_gene1671	5.188e-19	92.0	2D4D1@1|root,32TGT@2|Bacteria,1NP2H@1224|Proteobacteria,2W4KG@28216|Betaproteobacteria,4AIEI@80864|Comamonadaceae	28216|Betaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_7472526_0	1282362.AEAC466_20250	9.279e-222	700.0	COG0666@1|root,COG0666@2|Bacteria,1P877@1224|Proteobacteria,2U9TJ@28211|Alphaproteobacteria,2KIEQ@204458|Caulobacterales	204458|Caulobacterales	S	Ankyrin repeats (many copies)	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_7472526_4	1121946.AUAX01000009_gene4377	8.794e-64	231.0	arCOG11292@1|root,309SY@2|Bacteria,2GTQ8@201174|Actinobacteria,4DEIY@85008|Micromonosporales	201174|Actinobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_7472526_8	1220582.RRU01S_12_02440	1.101e-11	72.0	COG1846@1|root,COG1846@2|Bacteria,1RDGK@1224|Proteobacteria,2U9DY@28211|Alphaproteobacteria,4BE8E@82115|Rhizobiaceae	28211|Alphaproteobacteria	K	transcriptional regulator	-	-	-	ko:K06075	-	-	-	-	ko00000,ko03000	-	-	-	MarR,MarR_2
SRD3_k127_7472526_3	1242864.D187_003718	1.252e-142	458.0	COG0583@1|root,COG0583@2|Bacteria,1N4CG@1224|Proteobacteria	1224|Proteobacteria	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SRD3_k127_7472526_2	319003.Bra1253DRAFT_02350	9.002e-153	486.0	COG0702@1|root,COG0702@2|Bacteria,1MW44@1224|Proteobacteria,2TQPX@28211|Alphaproteobacteria,3JWG4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	GM	NmrA-like family	-	-	-	-	-	-	-	-	-	-	-	-	NmrA
SRD3_k127_7472526_6	864069.MicloDRAFT_00035980	8.626e-47	176.0	2E049@1|root,2ZAS0@2|Bacteria,1RAB8@1224|Proteobacteria,2U63B@28211|Alphaproteobacteria,1JX3U@119045|Methylobacteriaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF1857)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1857
SRD3_k127_7472526_9	1120705.FG95_01806	2.21e-06	49.0	2A6NX@1|root,30VGS@2|Bacteria,1P46A@1224|Proteobacteria,2UWUH@28211|Alphaproteobacteria,2K8CQ@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_7472526_1	1144307.PMI04_02837	5.973e-189	597.0	COG1957@1|root,COG1957@2|Bacteria,1MUIW@1224|Proteobacteria,2UP7U@28211|Alphaproteobacteria,2K954@204457|Sphingomonadales	204457|Sphingomonadales	F	Inosine-uridine preferring nucleoside hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	IU_nuc_hydro
SRD3_k127_7472526_5	1088721.NSU_4005	2.926e-47	185.0	COG2199@1|root,COG3706@2|Bacteria,1MZV7@1224|Proteobacteria,2TX0G@28211|Alphaproteobacteria,2KDWT@204457|Sphingomonadales	204457|Sphingomonadales	T	diguanylate cyclase	-	-	-	-	-	-	-	-	-	-	-	-	GGDEF,MASE1,PAS_4
SRD3_k127_7504259_3	1114964.L485_21970	1.129e-127	417.0	COG3063@1|root,COG3063@2|Bacteria,1QYDI@1224|Proteobacteria,2TXPG@28211|Alphaproteobacteria,2KEIF@204457|Sphingomonadales	204457|Sphingomonadales	NU	Protein of unknown function (DUF560)	-	-	-	-	-	-	-	-	-	-	-	-	DUF560
SRD3_k127_7504259_12	279238.Saro_1191	3.926e-50	190.0	2AJD0@1|root,319YE@2|Bacteria,1NXR1@1224|Proteobacteria,2UN0M@28211|Alphaproteobacteria,2K7CW@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_7504259_6	1346791.M529_07430	2.323e-75	267.0	COG3836@1|root,COG3836@2|Bacteria,1R9U6@1224|Proteobacteria,2TSTY@28211|Alphaproteobacteria	28211|Alphaproteobacteria	G	Belongs to the HpcH HpaI aldolase family	-	-	-	-	-	-	-	-	-	-	-	-	HpcH_HpaI
SRD3_k127_7504259_0	1346791.M529_01915	2.37e-263	825.0	COG3250@1|root,COG3250@2|Bacteria,1MXXM@1224|Proteobacteria,2U2NI@28211|Alphaproteobacteria,2K1WX@204457|Sphingomonadales	204457|Sphingomonadales	G	Carbohydrate esterase, sialic acid-specific acetylesterase	-	-	3.1.1.53	ko:K05970	-	-	-	-	ko00000,ko01000	-	-	-	Glyco_hydro_2_N,SASA
SRD3_k127_7504259_10	392499.Swit_1189	1.768e-53	198.0	COG3832@1|root,COG3832@2|Bacteria,1PFP8@1224|Proteobacteria,2VCHY@28211|Alphaproteobacteria,2K8CF@204457|Sphingomonadales	204457|Sphingomonadales	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
SRD3_k127_7504259_14	1054213.HMPREF9946_01494	2.809e-38	145.0	COG0640@1|root,COG0640@2|Bacteria,1N10H@1224|Proteobacteria,2UBRH@28211|Alphaproteobacteria,2JU0I@204441|Rhodospirillales	204441|Rhodospirillales	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20
SRD3_k127_7504259_16	392499.Swit_2960	1.357e-20	96.0	2BPFV@1|root,32I85@2|Bacteria,1Q8G2@1224|Proteobacteria,2VEP2@28211|Alphaproteobacteria,2K6XS@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_7504259_4	319003.Bra1253DRAFT_07719	4.452e-90	302.0	COG0500@1|root,COG2226@2|Bacteria,1R92P@1224|Proteobacteria,2VEX9@28211|Alphaproteobacteria,3JWE4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
SRD3_k127_7504259_8	1500306.JQLA01000003_gene4695	7.5e-73	252.0	COG3161@1|root,COG3161@2|Bacteria,1RDSK@1224|Proteobacteria,2U80Y@28211|Alphaproteobacteria,4BBIE@82115|Rhizobiaceae	28211|Alphaproteobacteria	H	chorismate lyase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_7504259_11	1174684.EBMC1_06374	3.362e-52	188.0	COG3791@1|root,COG3791@2|Bacteria,1N023@1224|Proteobacteria,2UC7M@28211|Alphaproteobacteria,2K6R3@204457|Sphingomonadales	204457|Sphingomonadales	S	Glutathione-dependent formaldehyde-activating enzyme	-	-	-	-	-	-	-	-	-	-	-	-	GFA
SRD3_k127_7504259_9	1219049.SP5_060_01060	1.686e-55	206.0	2A28X@1|root,30QJM@2|Bacteria,1Q7CS@1224|Proteobacteria,2VDHQ@28211|Alphaproteobacteria,2K5BY@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_7504259_15	1112212.JH584235_gene3542	2.598e-28	125.0	2E7B7@1|root,331UM@2|Bacteria,1N6KN@1224|Proteobacteria,2UD50@28211|Alphaproteobacteria,2K5JV@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_7504259_7	1112214.AHIS01000057_gene2877	1.192e-74	256.0	COG1376@1|root,COG1376@2|Bacteria,1RKB2@1224|Proteobacteria,2UAA8@28211|Alphaproteobacteria,2K4DR@204457|Sphingomonadales	204457|Sphingomonadales	S	L,D-transpeptidase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	YkuD_2
SRD3_k127_7504259_5	272630.MexAM1_META1p2314	2.411e-76	267.0	2F2IA@1|root,33VFC@2|Bacteria,1N3W7@1224|Proteobacteria,2UJ4R@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_7504259_1	1282360.ABAC460_03715	1.009e-251	799.0	COG4447@1|root,COG4447@2|Bacteria,1MVMU@1224|Proteobacteria,2U98D@28211|Alphaproteobacteria,2KHUR@204458|Caulobacterales	204458|Caulobacterales	S	cellulose binding	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_7504259_13	1121022.ABENE_01035	7.624e-41	158.0	COG5661@1|root,COG5661@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF922
SRD3_k127_7504259_2	1054213.HMPREF9946_04794	4.957e-169	542.0	COG4637@1|root,COG4637@2|Bacteria,1ND40@1224|Proteobacteria,2TTJW@28211|Alphaproteobacteria,2JU82@204441|Rhodospirillales	204441|Rhodospirillales	S	AAA ATPase domain	-	-	-	-	-	-	-	-	-	-	-	-	AAA_15,AAA_21
SRD3_k127_7504259_17	1502770.JQMG01000001_gene391	1.223e-11	74.0	COG2127@1|root,COG2127@2|Bacteria,1MZU8@1224|Proteobacteria,2VSCU@28216|Betaproteobacteria,2KN4C@206350|Nitrosomonadales	206350|Nitrosomonadales	S	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation	clpS	-	-	ko:K06891	-	-	-	-	ko00000	-	-	-	ClpS
SRD3_k127_752419_3	1522072.IL54_1076	8.229e-136	450.0	COG3408@1|root,COG3408@2|Bacteria,1NJCP@1224|Proteobacteria,2U1JA@28211|Alphaproteobacteria,2K33N@204457|Sphingomonadales	204457|Sphingomonadales	G	Bacterial alpha-L-rhamnosidase C-terminal domain	-	-	3.2.1.40	ko:K05989	-	-	-	-	ko00000,ko01000	-	-	-	Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N
SRD3_k127_752419_2	1174684.EBMC1_01660	3.471e-190	621.0	COG0515@1|root,COG0515@2|Bacteria,1MVEU@1224|Proteobacteria,2VEV6@28211|Alphaproteobacteria,2KDTH@204457|Sphingomonadales	204457|Sphingomonadales	KLT	Protein tyrosine kinase	-	-	2.7.11.1	ko:K12132	-	-	-	-	ko00000,ko01000,ko01001	-	-	-	Pkinase
SRD3_k127_752419_7	1174684.EBMC1_01655	7.595e-54	203.0	COG1595@1|root,COG1595@2|Bacteria,1RH1M@1224|Proteobacteria,2VGCT@28211|Alphaproteobacteria,2KE31@204457|Sphingomonadales	204457|Sphingomonadales	K	ECF sigma factor	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_ECF
SRD3_k127_752419_4	1144307.PMI04_00882	2.095e-123	432.0	COG5295@1|root,COG5295@2|Bacteria,1N338@1224|Proteobacteria,2UCS4@28211|Alphaproteobacteria,2KCDX@204457|Sphingomonadales	204457|Sphingomonadales	UW	YadA-like membrane anchor domain	-	-	-	-	-	-	-	-	-	-	-	-	YadA_anchor,YadA_head
SRD3_k127_752419_5	547163.BN979_06262	1.922e-81	279.0	COG1524@1|root,COG1524@2|Bacteria	2|Bacteria	S	mannose-ethanolamine phosphotransferase activity	-	-	-	-	-	-	-	-	-	-	-	-	Big_2,DUF3047,DUF4983,Hemopexin,Laminin_G_3,Metallophos,PA14,PglZ,Phosphodiest,SLH
SRD3_k127_752419_1	627192.SLG_08210	1.643e-228	717.0	COG0627@1|root,COG0627@2|Bacteria,1MX6W@1224|Proteobacteria,2TSCC@28211|Alphaproteobacteria,2K2PA@204457|Sphingomonadales	204457|Sphingomonadales	S	Tannase and feruloyl esterase	-	-	3.1.1.102	ko:K21105	-	-	R11541	RC00020,RC00041	ko00000,ko01000	-	-	-	Tannase
SRD3_k127_752419_0	1112212.JH584235_gene3479	4.078e-287	886.0	COG0606@1|root,COG0606@2|Bacteria,1MU4R@1224|Proteobacteria,2TQU6@28211|Alphaproteobacteria,2K1A3@204457|Sphingomonadales	204457|Sphingomonadales	O	ATPase with chaperone activity	-	-	-	ko:K07391	-	-	-	-	ko00000	-	-	-	ChlI,Mg_chelatase,Mg_chelatase_C
SRD3_k127_752419_9	1112216.JH594425_gene2293	2.584e-33	132.0	2A3CY@1|root,30RVE@2|Bacteria,1NNPQ@1224|Proteobacteria,2UJZN@28211|Alphaproteobacteria,2K7DT@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	PGPGW
SRD3_k127_752419_6	1112212.JH584235_gene3477	4.458e-69	244.0	COG0594@1|root,COG0594@2|Bacteria,1N6QY@1224|Proteobacteria,2UFAB@28211|Alphaproteobacteria,2K5Y4@204457|Sphingomonadales	204457|Sphingomonadales	J	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme	rnpA	-	3.1.26.5	ko:K03536	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Ribonuclease_P
SRD3_k127_752419_8	1090320.KB900605_gene3217	4.762e-35	138.0	COG0759@1|root,COG0759@2|Bacteria,1N6U4@1224|Proteobacteria,2UFKH@28211|Alphaproteobacteria,2K6W4@204457|Sphingomonadales	204457|Sphingomonadales	S	Could be involved in insertion of integral membrane proteins into the membrane	-	-	-	ko:K08998	-	-	-	-	ko00000	-	-	-	Haemolytic
SRD3_k127_752419_10	1112216.JH594425_gene2290	5.418e-05	46.0	COG0706@1|root,COG0706@2|Bacteria,1MV5M@1224|Proteobacteria,2TSTJ@28211|Alphaproteobacteria,2K1E1@204457|Sphingomonadales	204457|Sphingomonadales	U	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins	yidC	-	-	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044,ko03029	2.A.9	-	-	60KD_IMP,YidC_periplas
SRD3_k127_80512_0	1123269.NX02_18065	0.0	1142.0	COG1874@1|root,COG1874@2|Bacteria,1MUVR@1224|Proteobacteria,2TTC5@28211|Alphaproteobacteria,2K27Y@204457|Sphingomonadales	204457|Sphingomonadales	G	beta-galactosidase	-	-	3.2.1.23	ko:K12308	ko00052,map00052	-	R01105	RC00452	ko00000,ko00001,ko01000	-	-	-	Glyco_hydro_42,Glyco_hydro_42C,Glyco_hydro_42M
SRD3_k127_80512_1	1112214.AHIS01000104_gene1471	2.664e-316	977.0	COG0488@1|root,COG0488@2|Bacteria,1MU37@1224|Proteobacteria,2TQRZ@28211|Alphaproteobacteria,2K1B4@204457|Sphingomonadales	204457|Sphingomonadales	S	of ABC transporters with duplicated ATPase	-	-	-	ko:K06158	-	-	-	-	ko00000,ko03012	-	-	-	ABC_tran,ABC_tran_Xtn
SRD3_k127_80512_3	1112216.JH594425_gene2300	2.103e-188	603.0	COG0642@1|root,COG2205@2|Bacteria,1MUAK@1224|Proteobacteria,2TSUC@28211|Alphaproteobacteria,2JZUS@204457|Sphingomonadales	204457|Sphingomonadales	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
SRD3_k127_80512_4	1112212.JH584235_gene3486	8.613e-141	449.0	COG0745@1|root,COG0745@2|Bacteria,1MY3D@1224|Proteobacteria,2TTKG@28211|Alphaproteobacteria,2K0YQ@204457|Sphingomonadales	204457|Sphingomonadales	T	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	-	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
SRD3_k127_80512_11	153948.NAL212_3015	5.687e-06	57.0	COG3767@1|root,COG3767@2|Bacteria,1Q9CK@1224|Proteobacteria,2WBTH@28216|Betaproteobacteria,373S9@32003|Nitrosomonadales	28216|Betaproteobacteria	S	EF hand	-	-	-	-	-	-	-	-	-	-	-	-	EF-hand_5
SRD3_k127_80512_9	1112214.AHIS01000104_gene1465	5.391e-30	128.0	COG5126@1|root,COG5126@2|Bacteria,1NH5D@1224|Proteobacteria,2UF3D@28211|Alphaproteobacteria	28211|Alphaproteobacteria	DTZ	COG5126 Ca2 -binding protein (EF-Hand superfamily	-	-	-	-	-	-	-	-	-	-	-	-	EF-hand_1,EF-hand_5
SRD3_k127_80512_10	1112216.JH594425_gene2302	1.501e-20	97.0	COG5126@1|root,COG5126@2|Bacteria,1NH5D@1224|Proteobacteria	1224|Proteobacteria	DTZ	COG5126 Ca2 -binding protein (EF-Hand superfamily	-	-	-	-	-	-	-	-	-	-	-	-	EF-hand_5
SRD3_k127_80512_5	1112214.AHIS01000104_gene1464	7.833e-124	408.0	COG1946@1|root,COG1946@2|Bacteria,1RDZN@1224|Proteobacteria,2U8ZQ@28211|Alphaproteobacteria,2K3PK@204457|Sphingomonadales	204457|Sphingomonadales	I	Thioesterase-like superfamily	-	-	-	-	-	-	-	-	-	-	-	-	4HBT_3
SRD3_k127_80512_2	1112214.AHIS01000104_gene1463	7.421e-264	819.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2U0WI@28211|Alphaproteobacteria,2K09R@204457|Sphingomonadales	204457|Sphingomonadales	IQ	AMP-binding enzyme C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C
SRD3_k127_80512_7	1379701.JPJC01000212_gene1965	9.039e-87	290.0	COG0625@1|root,COG0625@2|Bacteria,1Q05U@1224|Proteobacteria,2U5IH@28211|Alphaproteobacteria,2K4DY@204457|Sphingomonadales	204457|Sphingomonadales	O	Glutathione S-transferase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	GST_C,GST_C_2,GST_N,GST_N_3
SRD3_k127_80512_6	629773.AORY01000012_gene910	3.067e-114	374.0	COG1028@1|root,COG1028@2|Bacteria,1PEWK@1224|Proteobacteria,2TV4E@28211|Alphaproteobacteria,2K5HU@204457|Sphingomonadales	204457|Sphingomonadales	IQ	Short-chain dehydrogenase reductase sdr	-	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
SRD3_k127_80512_8	1112216.JH594425_gene2306	1.792e-32	128.0	COG0477@1|root,COG2814@2|Bacteria,1MVSH@1224|Proteobacteria,2TUEW@28211|Alphaproteobacteria,2K3DH@204457|Sphingomonadales	204457|Sphingomonadales	EGP	Major Facilitator Superfamily	-	-	-	ko:K08151	-	M00668	-	-	ko00000,ko00002,ko01504,ko02000	2.A.1.2.38,2.A.1.2.39,2.A.1.2.4,2.A.1.2.41,2.A.1.2.68,2.A.1.2.75	-	-	MFS_1,Sugar_tr
SRD3_k127_87054_1	1449076.JOOE01000001_gene2364	1.284e-192	606.0	COG0715@1|root,COG0715@2|Bacteria,1MWDN@1224|Proteobacteria,2TS0X@28211|Alphaproteobacteria,2K03R@204457|Sphingomonadales	204457|Sphingomonadales	P	Nitrate transporter	-	-	-	ko:K22067	-	-	-	-	ko00000,ko02022	-	-	-	NMT1_2
SRD3_k127_87054_0	1030157.AFMP01000008_gene3274	1.163e-208	657.0	COG2223@1|root,COG2223@2|Bacteria,1MU27@1224|Proteobacteria,2TSXZ@28211|Alphaproteobacteria,2K14N@204457|Sphingomonadales	204457|Sphingomonadales	P	Transporter	-	-	-	ko:K02575	ko00910,map00910	M00615	-	-	ko00000,ko00001,ko00002,ko02000	2.A.1.8	-	-	MFS_1
SRD3_k127_885115_3	1282360.ABAC460_21765	3.886e-104	347.0	2E6HC@1|root,3314K@2|Bacteria,1NEKJ@1224|Proteobacteria,2UTX8@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_885115_4	1282360.ABAC460_21760	1.708e-80	278.0	2E6HC@1|root,3314K@2|Bacteria,1NEKJ@1224|Proteobacteria,2UTX8@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_885115_2	1346791.M529_03975	1.325e-125	409.0	COG3828@1|root,COG3828@2|Bacteria,1NAIA@1224|Proteobacteria	1224|Proteobacteria	S	Trehalose utilisation	-	-	-	-	-	-	-	-	-	-	-	-	ThuA
SRD3_k127_885115_1	1346791.M529_03980	8.374e-152	487.0	COG0684@1|root,COG0684@2|Bacteria	2|Bacteria	H	ribonuclease inhibitor activity	-	-	-	-	-	-	-	-	-	-	-	-	RraA-like
SRD3_k127_885115_0	573065.Astex_3212	4.146e-172	549.0	COG2730@1|root,COG2730@2|Bacteria,1QS6K@1224|Proteobacteria,2UQQN@28211|Alphaproteobacteria	28211|Alphaproteobacteria	G	Belongs to the glycosyl hydrolase 5 (cellulase A) family	-	-	3.2.1.4	ko:K01179	ko00500,ko01100,map00500,map01100	-	R06200,R11307,R11308	-	ko00000,ko00001,ko01000	-	GH5,GH9	-	Cellulase
SRD3_k127_910772_6	1449076.JOOE01000003_gene3298	1.93e-89	297.0	COG1595@1|root,COG1595@2|Bacteria,1RKMN@1224|Proteobacteria,2U9GS@28211|Alphaproteobacteria,2K4XQ@204457|Sphingomonadales	204457|Sphingomonadales	K	Sigma-70, region 4	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r2,Sigma70_r4_2
SRD3_k127_910772_0	1449076.JOOE01000003_gene3299	8.055e-262	821.0	COG2304@1|root,COG2304@2|Bacteria,1MUTS@1224|Proteobacteria,2TSQU@28211|Alphaproteobacteria,2K35S@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF3520)	-	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	DUF3520,VWA,vWF_A
SRD3_k127_910772_8	1449076.JOOE01000003_gene3300	1.174e-65	240.0	COG0457@1|root,COG0457@2|Bacteria,1Q7R1@1224|Proteobacteria,2VDWJ@28211|Alphaproteobacteria,2K699@204457|Sphingomonadales	204457|Sphingomonadales	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_910772_7	1090320.KB900605_gene902	1.688e-73	253.0	COG4291@1|root,COG4291@2|Bacteria,1RKP9@1224|Proteobacteria,2VGBT@28211|Alphaproteobacteria,2KE2Y@204457|Sphingomonadales	204457|Sphingomonadales	S	Protein of unknown function (DUF1345)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1345
SRD3_k127_910772_1	1090320.KB900605_gene901	1.409e-217	680.0	COG0124@1|root,COG0124@2|Bacteria,1MV2K@1224|Proteobacteria,2TSTH@28211|Alphaproteobacteria,2K101@204457|Sphingomonadales	204457|Sphingomonadales	J	histidyl-tRNA synthetase	hisS	-	6.1.1.21	ko:K01892	ko00970,map00970	M00359,M00360	R03655	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,tRNA-synt_His
SRD3_k127_910772_3	1112216.JH594425_gene1167	5.521e-194	610.0	COG0216@1|root,COG0216@2|Bacteria,1MV28@1224|Proteobacteria,2TQSV@28211|Alphaproteobacteria,2K1M6@204457|Sphingomonadales	204457|Sphingomonadales	J	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA	prfA	-	-	ko:K02835	-	-	-	-	ko00000,ko03012	-	-	-	PCRF,RF-1
SRD3_k127_910772_10	1219049.SP5_015_00320	3.726e-10	66.0	COG1104@1|root,COG1104@2|Bacteria,1MU1C@1224|Proteobacteria,2TSQE@28211|Alphaproteobacteria,2K05P@204457|Sphingomonadales	204457|Sphingomonadales	E	overlaps another CDS with the same product name	-	-	2.8.1.7	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	-	R07460,R11528,R11529	RC01789,RC02313	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	-	-	-	Aminotran_5
SRD3_k127_910772_4	1449076.JOOE01000004_gene619	2.256e-121	395.0	COG2890@1|root,COG2890@2|Bacteria,1MXCQ@1224|Proteobacteria,2TZFK@28211|Alphaproteobacteria,2K12S@204457|Sphingomonadales	204457|Sphingomonadales	J	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif	prmC	-	2.1.1.297	ko:K02493	-	-	R10806	RC00003,RC03279	ko00000,ko01000,ko03012	-	-	-	MTS,Methyltransf_31
SRD3_k127_910772_9	1112212.JH584235_gene2752	1.632e-54	205.0	COG5373@1|root,COG5373@2|Bacteria,1N7JV@1224|Proteobacteria,2TR7A@28211|Alphaproteobacteria,2K53N@204457|Sphingomonadales	204457|Sphingomonadales	S	Domain of unknown function (DUF4167)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4167
SRD3_k127_910772_2	1112212.JH584235_gene2753	1.413e-215	678.0	COG5316@1|root,COG5316@2|Bacteria,1QCVP@1224|Proteobacteria,2U2ZN@28211|Alphaproteobacteria,2K1T4@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4139
SRD3_k127_910772_5	1112212.JH584235_gene2754	6.537e-109	366.0	COG5316@1|root,COG5316@2|Bacteria,1MXED@1224|Proteobacteria,2U1NI@28211|Alphaproteobacteria,2K0YR@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_914259_8	1090320.KB900605_gene2561	8.46e-08	56.0	COG0500@1|root,COG0500@2|Bacteria,1QYDK@1224|Proteobacteria,2TXPI@28211|Alphaproteobacteria,2KEIG@204457|Sphingomonadales	204457|Sphingomonadales	Q	Methyltransferase small domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_25,Methyltransf_31
SRD3_k127_914259_1	1112212.JH584235_gene887	2.794e-210	657.0	COG0468@1|root,COG0468@2|Bacteria,1MU3C@1224|Proteobacteria,2TRPR@28211|Alphaproteobacteria,2K1TR@204457|Sphingomonadales	204457|Sphingomonadales	L	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage	recA	-	-	ko:K03553	ko03440,map03440	M00729	-	-	ko00000,ko00001,ko00002,ko03400	-	-	-	RecA
SRD3_k127_914259_7	1168034.FH5T_14775	5.69e-08	65.0	2EFWM@1|root,339NX@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_914259_3	1112212.JH584235_gene2926	4.369e-179	564.0	COG1816@1|root,COG1816@2|Bacteria,1MWBV@1224|Proteobacteria,2TSBX@28211|Alphaproteobacteria,2K1AI@204457|Sphingomonadales	204457|Sphingomonadales	F	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism	-	-	3.5.4.2	ko:K21053	ko00230,ko01100,map00230,map01100	-	R01244	RC00477	ko00000,ko00001,ko01000	-	-	-	A_deaminase
SRD3_k127_914259_4	1379701.JPJC01000155_gene2212	8.152e-73	251.0	COG2236@1|root,COG2236@2|Bacteria,1NGI9@1224|Proteobacteria,2UMUF@28211|Alphaproteobacteria,2K4SH@204457|Sphingomonadales	204457|Sphingomonadales	F	phosphoribosyltransferase	-	-	2.4.2.22	ko:K00769,ko:K07101	ko00230,ko01100,ko01110,map00230,map01100,map01110	-	R01229,R02142	RC00063,RC00122	ko00000,ko00001,ko01000	-	-	-	Pribosyltran
SRD3_k127_914259_5	1112214.AHIS01000095_gene750	1.59e-50	181.0	COG0784@1|root,COG0784@2|Bacteria,1N70P@1224|Proteobacteria,2UF5P@28211|Alphaproteobacteria,2K639@204457|Sphingomonadales	204457|Sphingomonadales	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
SRD3_k127_914259_0	1112212.JH584235_gene890	0.0	1223.0	COG2204@1|root,COG4191@1|root,COG2204@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TQQ9@28211|Alphaproteobacteria,2K0WG@204457|Sphingomonadales	204457|Sphingomonadales	T	Histidine kinase	-	-	2.7.13.3	ko:K13587	ko02020,ko04112,map02020,map04112	M00512	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA,PAS_4,PAS_8,Response_reg
SRD3_k127_914259_2	1219049.SP5_001_00750	4.515e-200	625.0	COG3590@1|root,COG3590@2|Bacteria,1MVNQ@1224|Proteobacteria,2TRU4@28211|Alphaproteobacteria,2K02W@204457|Sphingomonadales	204457|Sphingomonadales	O	peptidase M13	-	-	-	ko:K07386	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M13,Peptidase_M13_N
SRD3_k127_918624_5	1112214.AHIS01000049_gene2357	2.827e-14	73.0	COG2902@1|root,COG2902@2|Bacteria,1MXNV@1224|Proteobacteria,2TS89@28211|Alphaproteobacteria,2K0WP@204457|Sphingomonadales	204457|Sphingomonadales	E	glutamate dehydrogenase	-	-	1.4.1.2	ko:K15371	ko00220,ko00250,ko00430,ko00910,ko01100,map00220,map00250,map00430,map00910,map01100	-	R00243	RC00006,RC02799	ko00000,ko00001,ko01000	-	-	-	Bac_GDH
SRD3_k127_918624_2	1549858.MC45_01160	2.144e-101	340.0	COG2771@1|root,COG4219@1|root,COG2771@2|Bacteria,COG4219@2|Bacteria,1NCXK@1224|Proteobacteria,2UHC8@28211|Alphaproteobacteria,2K7BM@204457|Sphingomonadales	204457|Sphingomonadales	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	EF-hand_7,GerE
SRD3_k127_918624_0	1510531.JQJJ01000004_gene4621	6.897e-313	1012.0	COG2902@1|root,COG2902@2|Bacteria,1MXNV@1224|Proteobacteria,2TS89@28211|Alphaproteobacteria,3JVTJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Bacterial NAD-glutamate dehydrogenase	gdhB	GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0008150,GO:0008152,GO:0016491,GO:0016638,GO:0016639,GO:0055114	1.4.1.2	ko:K15371	ko00220,ko00250,ko00430,ko00910,ko01100,map00220,map00250,map00430,map00910,map01100	-	R00243	RC00006,RC02799	ko00000,ko00001,ko01000	-	-	-	Bac_GDH
SRD3_k127_918624_3	1120999.JONM01000002_gene805	6.385e-24	114.0	2EWRN@1|root,33Q3D@2|Bacteria,1NT21@1224|Proteobacteria,2VZ6C@28216|Betaproteobacteria,2KSCJ@206351|Neisseriales	206351|Neisseriales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_918624_4	1112216.JH594426_gene3834	1.942e-16	83.0	2AIXA@1|root,319EY@2|Bacteria,1Q2II@1224|Proteobacteria,2V9V5@28211|Alphaproteobacteria,2KB73@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SRD3_k127_918624_1	1121022.ABENE_00675	4.49e-196	617.0	COG1501@1|root,COG1501@2|Bacteria,1QUUE@1224|Proteobacteria,2UPQ7@28211|Alphaproteobacteria,2KI3V@204458|Caulobacterales	204458|Caulobacterales	G	Alpha-galactosidase	-	-	-	-	-	-	-	-	-	-	-	-	Melibiase_2
SRD3_k127_953683_3	1123269.NX02_17015	1.302e-149	486.0	COG0154@1|root,COG0154@2|Bacteria,1MUVQ@1224|Proteobacteria,2TU3V@28211|Alphaproteobacteria,2KCJV@204457|Sphingomonadales	204457|Sphingomonadales	J	Amidase	-	-	3.5.1.84,6.3.5.6,6.3.5.7	ko:K02433,ko:K19837	ko00791,ko00970,ko01100,ko01120,map00791,map00970,map01100,map01120	-	R03905,R04212,R05563	RC00010,RC01287	ko00000,ko00001,ko01000,ko03029	-	-	-	Amidase
SRD3_k127_953683_4	1090320.KB900605_gene2513	3.971e-129	420.0	COG0385@1|root,COG0385@2|Bacteria,1MUMM@1224|Proteobacteria,2TU7J@28211|Alphaproteobacteria,2K0HH@204457|Sphingomonadales	204457|Sphingomonadales	S	Bile acid sodium symporter	-	-	-	ko:K14347	-	-	-	-	ko00000,ko02000,ko04147	2.A.93.1	-	-	SBF_like
SRD3_k127_953683_5	1112214.AHIS01000006_gene239	2.448e-104	351.0	COG0561@1|root,COG0561@2|Bacteria,1MXIH@1224|Proteobacteria,2TTNZ@28211|Alphaproteobacteria,2K1PZ@204457|Sphingomonadales	204457|Sphingomonadales	S	Sucrose-6F-phosphate phosphohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_3
SRD3_k127_953683_2	1112212.JH584235_gene1842	2.408e-178	562.0	COG1023@1|root,COG1023@2|Bacteria,1QU14@1224|Proteobacteria,2TT6S@28211|Alphaproteobacteria,2K14W@204457|Sphingomonadales	204457|Sphingomonadales	G	6-phosphogluconate dehydrogenase	gnd	-	1.1.1.343,1.1.1.44	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	M00004,M00006	R01528,R10221	RC00001,RC00539	ko00000,ko00001,ko00002,ko01000	-	-	-	6PGD,NAD_binding_2
SRD3_k127_953683_1	1112216.JH594425_gene169	7.931e-188	597.0	COG0176@1|root,COG0176@2|Bacteria,1N9G3@1224|Proteobacteria,2UK7P@28211|Alphaproteobacteria,2K1N9@204457|Sphingomonadales	204457|Sphingomonadales	G	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway	tal	-	2.2.1.2,5.3.1.9	ko:K13810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00004,M00007,M00114	R01827,R02739,R02740,R03321	RC00376,RC00439,RC00563,RC00604	ko00000,ko00001,ko00002,ko01000	-	-	-	TAL_FSA
SRD3_k127_953683_0	1112212.JH584235_gene1844	3.055e-312	961.0	COG0021@1|root,COG0021@2|Bacteria,1MUEY@1224|Proteobacteria,2TQUX@28211|Alphaproteobacteria,2K0UZ@204457|Sphingomonadales	204457|Sphingomonadales	G	Belongs to the transketolase family	tkt	-	2.2.1.1	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01067,R01641,R01830,R06590	RC00032,RC00226,RC00571,RC01560	ko00000,ko00001,ko00002,ko01000	-	-	-	Transket_pyr,Transketolase_C,Transketolase_N
## 3034 queries scanned
## Total time (seconds): 70.52591156959534
## Rate: 43.02 q/s