## Fri Oct 18 17:19:46 2024
## emapper-2.1.12
## /data/home/zkh/miniconda3/envs/eggnog-mapper/bin/emapper.py -i /data/home/zkh/binning/Potential_rubisco_autotrophic/SX1_bin.35.fa -m mmseqs --itype genome -o SX1_bin.35 --output_dir /data/home/zkh/meta_analysis/eggnog-mapper/all_bins_1385/SX1_bin.35 --cpu 28
##
#query	seed_ortholog	evalue	score	eggNOG_OGs	max_annot_lvl	COG_category	Description	Preferred_name	GOs	EC	KEGG_ko	KEGG_Pathway	KEGG_Module	KEGG_Reaction	KEGG_rclass	BRITE	KEGG_TC	CAZy	BiGG_Reaction	PFAMs
SX1_k127_1002679_0	1297865.APJD01000014_gene778	2.881e-177	557.0	COG0477@1|root,COG2814@2|Bacteria,1R3UT@1224|Proteobacteria,2TR7Z@28211|Alphaproteobacteria,3JU5V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_1002679_2	1297865.APJD01000014_gene779	1.03e-40	156.0	29F4H@1|root,30228@2|Bacteria,1NAWY@1224|Proteobacteria,2UHQM@28211|Alphaproteobacteria,3K0Z1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1002679_1	1297865.APJD01000014_gene780	6.617e-133	424.0	COG3696@1|root,COG3696@2|Bacteria,1NUIV@1224|Proteobacteria,2TRWM@28211|Alphaproteobacteria,3JRIE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K07787	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.6.1.4	-	-	ACR_tran
SX1_k127_1026654_0	172088.AUGA01000025_gene386	3.873e-215	672.0	COG1408@1|root,COG1408@2|Bacteria,1MUH5@1224|Proteobacteria,2TVHN@28211|Alphaproteobacteria,3JVMT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Calcineurin-like phosphoesterase	-	-	-	ko:K07098	-	-	-	-	ko00000	-	-	-	Metallophos
SX1_k127_1026654_1	1297865.APJD01000001_gene6022	1.002e-175	554.0	2CAM1@1|root,301FE@2|Bacteria,1RJ36@1224|Proteobacteria,2U473@28211|Alphaproteobacteria,3JWV8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Ceramidase
SX1_k127_1046390_3	1230476.C207_03473	2.839e-102	334.0	2C86A@1|root,32VZQ@2|Bacteria,1MUVK@1224|Proteobacteria,2U1E4@28211|Alphaproteobacteria,3JS19@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_05890	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1046390_7	398525.KB900701_gene2685	2.405e-56	197.0	COG0234@1|root,COG0234@2|Bacteria,1MZ2X@1224|Proteobacteria,2U9AQ@28211|Alphaproteobacteria,3JZFZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter	groS	-	-	ko:K04078	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	Cpn10
SX1_k127_1046390_0	398525.KB900701_gene2684	0.0	1018.0	COG0459@1|root,COG0459@2|Bacteria,1MURR@1224|Proteobacteria,2TS07@28211|Alphaproteobacteria,3JSH9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions	groL	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220	-	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	-	-	-	Cpn60_TCP1
SX1_k127_1046390_8	1297865.APJD01000009_gene2891	1.884e-53	188.0	29DZN@1|root,300XK@2|Bacteria,1N5DG@1224|Proteobacteria,2UE8M@28211|Alphaproteobacteria,3K0HP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1046390_5	1297865.APJD01000009_gene2892	8.398e-72	243.0	COG2329@1|root,COG2329@2|Bacteria,1RE6Q@1224|Proteobacteria,2U7AX@28211|Alphaproteobacteria,3JYUQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Antibiotic biosynthesis monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	ABM
SX1_k127_1046390_4	1297865.APJD01000009_gene2893	8.745e-96	314.0	COG1846@1|root,COG1846@2|Bacteria,1MZXE@1224|Proteobacteria,2U7TP@28211|Alphaproteobacteria,3JXJF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR_2
SX1_k127_1046390_1	1297865.APJD01000009_gene2894	5.393e-250	773.0	2FJIR@1|root,34B87@2|Bacteria,1MUI1@1224|Proteobacteria,2TSUN@28211|Alphaproteobacteria,3JSV5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1046390_6	1297865.APJD01000009_gene2895	2.624e-64	221.0	2ANNG@1|root,31DMW@2|Bacteria,1P53Q@1224|Proteobacteria,2UYDT@28211|Alphaproteobacteria,3K5PA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1046390_9	1297865.APJD01000009_gene2896	7.292e-39	145.0	2AGDS@1|root,316JK@2|Bacteria,1NHWV@1224|Proteobacteria,2UKNS@28211|Alphaproteobacteria,3K1S4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1046390_2	1297865.APJD01000009_gene2897	2.232e-117	378.0	COG5485@1|root,COG5485@2|Bacteria,1R9WY@1224|Proteobacteria,2U6GT@28211|Alphaproteobacteria,3JYE0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SnoaL-like polyketide cyclase	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL
SX1_k127_1046878_0	1297865.APJD01000005_gene3870	9.912e-213	661.0	COG0583@1|root,COG0583@2|Bacteria,1N663@1224|Proteobacteria,2TRAK@28211|Alphaproteobacteria,3JXH0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_1046878_2	1230476.C207_05137	1.02e-87	290.0	COG3791@1|root,COG3791@2|Bacteria,1RHWZ@1224|Proteobacteria,2UBRG@28211|Alphaproteobacteria,3JY7Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Glutathione-dependent formaldehyde-activating enzyme	-	-	-	-	-	-	-	-	-	-	-	-	GFA
SX1_k127_1046878_1	1297865.APJD01000005_gene3868	1.644e-178	561.0	COG1028@1|root,COG1028@2|Bacteria,1R4BJ@1224|Proteobacteria,2U1Q1@28211|Alphaproteobacteria,3JUZ6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	MA20_10020	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_1046878_3	1297865.APJD01000005_gene3867	4.167e-36	136.0	COG2128@1|root,COG2128@2|Bacteria,1R4FX@1224|Proteobacteria,2TTF7@28211|Alphaproteobacteria,3JSUS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Carboxymuconolactone decarboxylase family	MA20_10015	-	-	-	-	-	-	-	-	-	-	-	CMD
SX1_k127_1051095_1	1297865.APJD01000036_gene1535	0.0	1099.0	COG0439@1|root,COG1984@1|root,COG2049@1|root,COG0439@2|Bacteria,COG1984@2|Bacteria,COG2049@2|Bacteria,1MU4H@1224|Proteobacteria,2TRU5@28211|Alphaproteobacteria,3JXDZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EI	Allophanate hydrolase subunit 2	uca	-	6.3.4.6	ko:K01941	ko00220,ko00791,ko01100,map00220,map00791,map01100	-	R00774	RC00378	ko00000,ko00001,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2,CT_A_B,CT_C_D
SX1_k127_1051095_2	1297865.APJD01000036_gene1536	8.012e-167	527.0	COG2084@1|root,COG2084@2|Bacteria,1MUGU@1224|Proteobacteria,2TT50@28211|Alphaproteobacteria,3JS6C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase	glxR	-	1.1.1.60	ko:K00042	ko00630,ko01100,map00630,map01100	-	R01745,R01747	RC00099	ko00000,ko00001,ko01000	-	-	-	NAD_binding_11,NAD_binding_2
SX1_k127_1051095_0	1297865.APJD01000036_gene1537	0.0	1500.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,3JVPA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Putative diguanylate phosphodiesterase	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GAF_2,GGDEF
SX1_k127_1051095_4	1230476.C207_04341	4.805e-136	437.0	COG2771@1|root,COG2771@2|Bacteria,1N6UR@1224|Proteobacteria,2TXHN@28211|Alphaproteobacteria,3K6H1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Autoinducer binding domain	-	-	-	ko:K07782	ko02020,ko02024,ko02026,map02020,map02024,map02026	-	-	-	ko00000,ko00001,ko03000	-	-	-	Autoind_bind,GerE
SX1_k127_1051095_3	1297865.APJD01000036_gene1539	1.719e-142	462.0	COG0410@1|root,COG0410@2|Bacteria,1MUR3@1224|Proteobacteria,2TSWQ@28211|Alphaproteobacteria,3JV3U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ATPases associated with a variety of cellular activities	MA20_09945	-	-	ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran
SX1_k127_1051095_5	1297865.APJD01000036_gene1540	4.125e-112	362.0	COG0411@1|root,COG0411@2|Bacteria,1MX51@1224|Proteobacteria,2VEYC@28211|Alphaproteobacteria,3JTAQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid ATP-binding cassette transporter	MA20_09940	-	-	ko:K01995	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_1051937_7	1297865.APJD01000009_gene2758	1.564e-52	186.0	COG0358@1|root,COG0358@2|Bacteria,1MUHC@1224|Proteobacteria,2TRU2@28211|Alphaproteobacteria,3JQWZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	dnaG	-	-	ko:K02316	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	DnaB_bind,Toprim_4,Toprim_N,zf-CHC2
SX1_k127_1051937_5	1297865.APJD01000009_gene2759	3.995e-112	366.0	2DKJT@1|root,309RD@2|Bacteria,1R36E@1224|Proteobacteria,2TZYN@28211|Alphaproteobacteria,3K71K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Chlorite dismutase	-	-	-	-	-	-	-	-	-	-	-	-	Chlor_dismutase
SX1_k127_1051937_6	1297865.APJD01000009_gene2761	4.066e-85	284.0	COG2105@1|root,COG2105@2|Bacteria,1N80E@1224|Proteobacteria,2U5YU@28211|Alphaproteobacteria,3JY9V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Gamma-glutamyl cyclotransferase, AIG2-like	-	-	-	-	-	-	-	-	-	-	-	-	GGACT
SX1_k127_1051937_3	1297865.APJD01000009_gene2762	5.161e-178	567.0	COG1305@1|root,COG1305@2|Bacteria,1MWAI@1224|Proteobacteria,2TURT@28211|Alphaproteobacteria,3JS7N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Transglutaminase/protease-like homologues	-	-	-	-	-	-	-	-	-	-	-	-	Transglut_core
SX1_k127_1051937_2	1297865.APJD01000009_gene2763	4.312e-200	625.0	COG1305@1|root,COG1305@2|Bacteria,1MVAG@1224|Proteobacteria,2TSVH@28211|Alphaproteobacteria,3JU4J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Transglutaminase/protease-like homologues	-	-	-	-	-	-	-	-	-	-	-	-	Bact_transglu_N,Transglut_core
SX1_k127_1051937_4	1297865.APJD01000009_gene2764	4.248e-175	549.0	COG3931@1|root,COG3931@2|Bacteria,1QI71@1224|Proteobacteria,2TVK6@28211|Alphaproteobacteria,3JTTE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	N-formylglutamate amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	FGase
SX1_k127_1051937_9	1297865.APJD01000009_gene2765	4.18e-31	123.0	2AEYQ@1|root,314WN@2|Bacteria,1N89E@1224|Proteobacteria,2UJ8J@28211|Alphaproteobacteria,3K1KM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1051937_1	1297865.APJD01000009_gene2766	1.03e-237	736.0	COG3182@1|root,COG3182@2|Bacteria,1MW2S@1224|Proteobacteria,2TSFC@28211|Alphaproteobacteria,3JW59@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PepSY-associated TM region	-	-	-	-	-	-	-	-	-	-	-	-	PepSY_TM
SX1_k127_1051937_0	1297865.APJD01000009_gene2768	1.285e-277	852.0	COG4773@1|root,COG4773@2|Bacteria,1QTT0@1224|Proteobacteria,2TQSQ@28211|Alphaproteobacteria,3JQP4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SX1_k127_106664_7	395963.Bind_2095	6.711e-56	199.0	COG3193@1|root,COG3193@2|Bacteria,1N08N@1224|Proteobacteria,2U5ES@28211|Alphaproteobacteria,3NCGK@45404|Beijerinckiaceae	28211|Alphaproteobacteria	S	Haem-degrading	MA20_43165	-	-	-	-	-	-	-	-	-	-	-	Haem_degrading
SX1_k127_106664_0	1297865.APJD01000016_gene3387	0.0	2018.0	COG0247@1|root,COG0277@1|root,COG0247@2|Bacteria,COG0277@2|Bacteria,1MU6Y@1224|Proteobacteria,2TSN5@28211|Alphaproteobacteria,3JUXZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	4Fe-4S dicluster domain	MA20_43170	-	-	-	-	-	-	-	-	-	-	-	CCG,FAD-oxidase_C,FAD_binding_4,Fer4_8
SX1_k127_106664_5	1297865.APJD01000016_gene3388	1.772e-150	500.0	COG1802@1|root,COG1802@2|Bacteria,1N7GE@1224|Proteobacteria,2TRBH@28211|Alphaproteobacteria,3JUUF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FCD	MA20_43175	-	-	ko:K11475	-	-	-	-	ko00000,ko03000	-	-	-	FCD,GntR
SX1_k127_106664_3	1230476.C207_01223	3.657e-252	779.0	COG0075@1|root,COG0075@2|Bacteria,1MWHJ@1224|Proteobacteria,2TQSN@28211|Alphaproteobacteria,3JRV2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Aminotransferase class-V	MA20_43180	-	2.6.1.44,2.6.1.45,2.6.1.51	ko:K00830	ko00250,ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko04146,map00250,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map04146	M00346,M00532	R00369,R00372,R00585,R00588	RC00006,RC00008,RC00018	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_5
SX1_k127_106664_1	1297865.APJD01000016_gene3390	2.037e-284	874.0	COG2271@1|root,COG2271@2|Bacteria,1MVPS@1224|Proteobacteria,2TTHW@28211|Alphaproteobacteria,3JU2W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_106664_2	1297865.APJD01000016_gene3391	1.58e-262	824.0	COG0075@1|root,COG0075@2|Bacteria,1MWHJ@1224|Proteobacteria,2TQSN@28211|Alphaproteobacteria,3JRV2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Aminotransferase class-V	MA20_43190	-	2.6.1.44,2.6.1.45,2.6.1.51	ko:K00830	ko00250,ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko04146,map00250,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map04146	M00346,M00532	R00369,R00372,R00585,R00588	RC00006,RC00008,RC00018	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_5
SX1_k127_106664_6	1297865.APJD01000016_gene3392	4.739e-74	250.0	COG1024@1|root,COG1024@2|Bacteria,1MXBB@1224|Proteobacteria,2TSPM@28211|Alphaproteobacteria,3JSMT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	-	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_1071439_0	420324.KI912054_gene5716	1.769e-196	628.0	COG2114@1|root,COG3899@1|root,COG2114@2|Bacteria,COG3899@2|Bacteria,1MUDT@1224|Proteobacteria,2TQVN@28211|Alphaproteobacteria,1JR57@119045|Methylobacteriaceae	28211|Alphaproteobacteria	T	Adenylate and Guanylate cyclase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	AAA_16,DZR,Guanylate_cyc,SAM_1
SX1_k127_1072211_1	1297865.APJD01000006_gene4545	2.303e-121	390.0	COG0580@1|root,COG0580@2|Bacteria,1PPTN@1224|Proteobacteria,2TW8M@28211|Alphaproteobacteria,3JRC9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Belongs to the MIP aquaporin (TC 1.A.8) family	aqpZ	-	-	-	-	-	-	-	-	-	-	-	MIP
SX1_k127_1072211_0	1297865.APJD01000006_gene4544	0.0	1854.0	COG0657@1|root,COG2072@1|root,COG0657@2|Bacteria,COG2072@2|Bacteria,1MUQH@1224|Proteobacteria,2TRG4@28211|Alphaproteobacteria,3JRSQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Flavin-binding monooxygenase-like	MA20_02535	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_3,FMO-like,Pyr_redox_2,Pyr_redox_3
SX1_k127_1072211_2	1297865.APJD01000006_gene4543	1.113e-107	348.0	COG2020@1|root,COG2020@2|Bacteria,1MWU6@1224|Proteobacteria,2TU80@28211|Alphaproteobacteria,3JQR6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	methyltransferase activity	-	-	2.1.1.334	ko:K21310	ko00920,map00920	-	R11546	RC02653	ko00000,ko00001,ko01000	-	-	-	NnrU,PEMT
SX1_k127_1095170_1	1297865.APJD01000035_gene5475	4.691e-265	817.0	COG0683@1|root,COG0683@2|Bacteria,1MU4V@1224|Proteobacteria,2TV7X@28211|Alphaproteobacteria,3JQUF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	MA20_23350	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_1095170_3	1297865.APJD01000035_gene5476	1.472e-67	230.0	COG3759@1|root,COG3759@2|Bacteria,1MZ4F@1224|Proteobacteria,2UBW9@28211|Alphaproteobacteria,3JYZP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1304)	MA20_23345	-	-	ko:K08987	-	-	-	-	ko00000	-	-	-	DUF1304
SX1_k127_1095170_2	1297865.APJD01000035_gene5477	8.443e-111	364.0	COG0350@1|root,COG0350@2|Bacteria,1N2YQ@1224|Proteobacteria,2TRRN@28211|Alphaproteobacteria,3JVY5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	6-O-methylguanine DNA methyltransferase, DNA binding domain	ogt	-	2.1.1.63	ko:K00567	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DNA_binding_1,Methyltransf_1N
SX1_k127_1095170_4	224911.27354970	0.0005723	46.0	COG2897@1|root,COG2897@2|Bacteria,1MW4B@1224|Proteobacteria,2TR9R@28211|Alphaproteobacteria,3JT1H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rhodanese Homology Domain	sseA	-	2.8.1.1,2.8.1.2	ko:K01011	ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122	-	R01931,R03105,R03106	RC00214	ko00000,ko00001,ko01000	-	-	-	Rhodanese
SX1_k127_1095170_0	1297865.APJD01000035_gene5478	0.0	1855.0	COG2844@1|root,COG2844@2|Bacteria,1MV54@1224|Proteobacteria,2TSV0@28211|Alphaproteobacteria,3JV2M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen	glnD	GO:0006355,GO:0006464,GO:0006807,GO:0006808,GO:0007154,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0018175,GO:0018177,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070887,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0080090,GO:0090293,GO:1901564,GO:1901698,GO:1901699,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141	2.7.7.59	ko:K00990	ko02020,map02020	-	-	-	ko00000,ko00001,ko01000	-	-	-	ACT,GlnD_UR_UTase,GlnE,HD,NTP_transf_2
SX1_k127_1097925_1	1297865.APJD01000019_gene3320	1.628e-128	411.0	COG1670@1|root,COG1670@2|Bacteria,1N6Q1@1224|Proteobacteria,2UG72@28211|Alphaproteobacteria,3JRYG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Acetyltransferase (GNAT) domain	MA20_44020	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3
SX1_k127_1097925_4	1297865.APJD01000019_gene3321	2.215e-51	182.0	COG0211@1|root,COG0211@2|Bacteria,1MZGH@1224|Proteobacteria,2UBUX@28211|Alphaproteobacteria,3JZGK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the bacterial ribosomal protein bL27 family	rpmA	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02899	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L27
SX1_k127_1097925_3	1230476.C207_06350	3.84e-70	239.0	COG0261@1|root,COG0261@2|Bacteria,1MZEW@1224|Proteobacteria,2UBT3@28211|Alphaproteobacteria,3JZ0N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	This protein binds to 23S rRNA in the presence of protein L20	rplU	GO:0003674,GO:0003735,GO:0005198	-	ko:K02888	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	HHH_5,Ribosomal_L21p
SX1_k127_1097925_0	1297865.APJD01000019_gene3323	1.919e-197	619.0	COG4977@1|root,COG4977@2|Bacteria,1MUDK@1224|Proteobacteria,2TS7I@28211|Alphaproteobacteria,3JSNX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI,HTH_18
SX1_k127_1097925_2	1297865.APJD01000019_gene3324	4.743e-102	334.0	COG0300@1|root,COG0300@2|Bacteria,1MWNZ@1224|Proteobacteria,2TTFS@28211|Alphaproteobacteria,3JSV1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	KR domain	-	-	-	ko:K07124	-	-	-	-	ko00000	-	-	-	adh_short
SX1_k127_1101264_2	1297865.APJD01000003_gene6130	2.111e-208	649.0	COG1572@1|root,COG2755@1|root,COG2931@1|root,COG3210@1|root,COG4932@1|root,COG1572@2|Bacteria,COG2755@2|Bacteria,COG2931@2|Bacteria,COG3210@2|Bacteria,COG4932@2|Bacteria,1MU7T@1224|Proteobacteria,2TRVY@28211|Alphaproteobacteria,3JWUW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	QU	COG2931 RTX toxins and related Ca2 -binding proteins	-	-	-	-	-	-	-	-	-	-	-	-	Cadherin,HemolysinCabind
SX1_k127_1101264_6	1297865.APJD01000003_gene6129	1.941e-106	345.0	COG4675@1|root,COG4675@2|Bacteria,1MZY9@1224|Proteobacteria,2U61A@28211|Alphaproteobacteria,3K648@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Phage Tail Collar Domain	-	-	-	-	-	-	-	-	-	-	-	-	Collar
SX1_k127_1101264_5	1297865.APJD01000003_gene6128	2.029e-108	351.0	COG4675@1|root,COG4675@2|Bacteria,1MZY9@1224|Proteobacteria,2UC68@28211|Alphaproteobacteria,3JYHF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Phage Tail Collar Domain	-	-	-	-	-	-	-	-	-	-	-	-	Collar
SX1_k127_1101264_4	1297865.APJD01000003_gene6127	1.208e-109	355.0	COG4675@1|root,COG4675@2|Bacteria,1MZY9@1224|Proteobacteria,2U8Y9@28211|Alphaproteobacteria,3JYKH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Phage Tail Collar Domain	-	-	-	-	-	-	-	-	-	-	-	-	Collar
SX1_k127_1101264_3	1297865.APJD01000003_gene6126	1.528e-119	385.0	COG0454@1|root,COG0456@2|Bacteria,1N29T@1224|Proteobacteria,2UF3Q@28211|Alphaproteobacteria,3JYMP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FR47-like protein	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10
SX1_k127_1101264_1	1297865.APJD01000003_gene6124	5.912e-246	761.0	COG1454@1|root,COG1454@2|Bacteria,1MVPH@1224|Proteobacteria,2TSX8@28211|Alphaproteobacteria,3JUVR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Iron-containing alcohol dehydrogenase	MA20_22910	-	1.3.1.32	ko:K00217	ko00361,ko00362,ko00364,ko00623,ko01100,ko01120,ko01220,map00361,map00362,map00364,map00623,map01100,map01120,map01220	-	R02988,R02989,R05355,R06848,R07781,R09137,R09138,R09223,R09224	RC00107,RC01335,RC01689,RC02442	ko00000,ko00001,ko01000	-	-	-	Fe-ADH
SX1_k127_1101264_0	1297865.APJD01000003_gene6123	1.146e-280	863.0	COG0318@1|root,COG0318@2|Bacteria,1MUIC@1224|Proteobacteria,2TT3K@28211|Alphaproteobacteria,3JV64@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	MA20_22915	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
SX1_k127_1107293_2	1297865.APJD01000035_gene5464	1.011e-193	605.0	COG2304@1|root,COG2304@2|Bacteria,1N2UU@1224|Proteobacteria,2TYMP@28211|Alphaproteobacteria,3JUCA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	von Willebrand factor type A domain	-	-	-	-	-	-	-	-	-	-	-	-	VWA,VWA_2
SX1_k127_1107293_0	1297865.APJD01000035_gene5463	0.0	1137.0	COG0366@1|root,COG0366@2|Bacteria,1MVKX@1224|Proteobacteria,2TRS3@28211|Alphaproteobacteria,3JS80@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Alpha-amylase domain	MA20_23410	-	3.2.1.20	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100	-	R00028,R00801,R00802,R06087,R06088	RC00028,RC00049,RC00077	ko00000,ko00001,ko01000	-	GH31	-	Alpha-amylase,DUF3459
SX1_k127_1107293_3	1297865.APJD01000035_gene5462	9.068e-164	519.0	COG1723@1|root,COG1723@2|Bacteria,1MWYM@1224|Proteobacteria,2TU31@28211|Alphaproteobacteria,3JSDE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterised ACR, YagE family COG1723	-	-	-	-	-	-	-	-	-	-	-	-	DUF155
SX1_k127_1107293_4	1297865.APJD01000035_gene5461	6.485e-153	482.0	COG0491@1|root,COG0491@2|Bacteria,1MUDN@1224|Proteobacteria,2TQJ9@28211|Alphaproteobacteria,3JT7M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metallo-beta-lactamase superfamily	ycbL	GO:0003674,GO:0003824,GO:0004416,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006089,GO:0008150,GO:0008152,GO:0009056,GO:0009438,GO:0009987,GO:0016787,GO:0016788,GO:0016790,GO:0019243,GO:0019752,GO:0032787,GO:0042180,GO:0042182,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0051596,GO:0061727,GO:0071704,GO:1901575,GO:1901615	-	-	-	-	-	-	-	-	-	-	Lactamase_B
SX1_k127_1107293_1	1297865.APJD01000035_gene5460	6.003e-267	826.0	COG3509@1|root,COG3509@2|Bacteria,1MXUI@1224|Proteobacteria,2TUS5@28211|Alphaproteobacteria,3JSEQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Esterase PHB depolymerase	-	-	-	-	-	-	-	-	-	-	-	-	Esterase_phd
SX1_k127_1107293_5	1297865.APJD01000035_gene5459	1.12e-54	192.0	COG0477@1|root,COG0477@2|Bacteria,1MWB4@1224|Proteobacteria,2TWQF@28211|Alphaproteobacteria,3JRCQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_1110004_0	1297865.APJD01000011_gene6621	0.0	1073.0	COG0318@1|root,COG0318@2|Bacteria,1MUIC@1224|Proteobacteria,2TRRZ@28211|Alphaproteobacteria,3JT63@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	MA20_06755	-	6.2.1.3	ko:K00666,ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
SX1_k127_1110004_4	1297865.APJD01000011_gene6620	1.232e-103	337.0	2BSJT@1|root,32MNB@2|Bacteria,1R9E6@1224|Proteobacteria,2U4IP@28211|Alphaproteobacteria,3JWZW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1110004_1	1297865.APJD01000011_gene6619	8.365e-267	820.0	COG2267@1|root,COG2267@2|Bacteria,1QU7K@1224|Proteobacteria,2U0H3@28211|Alphaproteobacteria,3JR1E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Serine aminopeptidase, S33	-	-	2.7.10.2,3.3.2.9	ko:K01253,ko:K08253	ko00980,ko04976,ko05204,map00980,map04976,map05204	-	R07013,R07014,R07027,R07071,R07072,R07082,R09410,R09417,R09443	RC01447,RC01728,RC01764,RC02528	ko00000,ko00001,ko01000,ko01002	-	-	-	Abhydrolase_1
SX1_k127_1110004_2	1297865.APJD01000011_gene6618	1.528e-202	632.0	COG1633@1|root,COG1814@1|root,COG1633@2|Bacteria,COG1814@2|Bacteria,1MUET@1224|Proteobacteria,2TQMZ@28211|Alphaproteobacteria,3JR4J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Rubrerythrin	MA20_19235	-	-	-	-	-	-	-	-	-	-	-	Rubrerythrin
SX1_k127_1110004_3	1297865.APJD01000011_gene6617	1.435e-185	596.0	2B47E@1|root,31WYM@2|Bacteria,1R5Q0@1224|Proteobacteria,2U37C@28211|Alphaproteobacteria,3JW60@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1110004_5	1297865.APJD01000011_gene6616	1.172e-89	296.0	COG0154@1|root,COG0154@2|Bacteria,1MW3Z@1224|Proteobacteria,2TS56@28211|Alphaproteobacteria,3JRE9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the amidase family	-	-	3.5.1.4	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	-	R02540,R03096,R03180,R03909,R05551,R05590	RC00010,RC00100,RC00950,RC01025	ko00000,ko00001,ko01000	-	-	-	Amidase
SX1_k127_1112229_3	1297865.APJD01000011_gene6530	5.661e-23	99.0	COG2130@1|root,COG2130@2|Bacteria,1MUC2@1224|Proteobacteria,2TQYM@28211|Alphaproteobacteria,3JSWX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	N-terminal domain of oxidoreductase	MA20_40260	-	-	ko:K07119	-	-	-	-	ko00000	-	-	-	ADH_N_2,ADH_zinc_N
SX1_k127_1112229_1	1297865.APJD01000011_gene6531	7.791e-258	797.0	COG1301@1|root,COG1301@2|Bacteria,1MU0Q@1224|Proteobacteria,2TUFB@28211|Alphaproteobacteria,3JTXI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Sodium:dicarboxylate symporter family	gltP	-	-	-	-	-	-	-	-	-	-	-	SDF
SX1_k127_1112229_2	1297865.APJD01000011_gene6532	1.173e-196	613.0	COG0834@1|root,COG0834@2|Bacteria,1MXEJ@1224|Proteobacteria,2TRQT@28211|Alphaproteobacteria,3JQYA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	ET	Bacterial periplasmic substrate-binding proteins	cjaA	-	-	ko:K02030,ko:K10001	ko02010,ko02020,map02010,map02020	M00230,M00236	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3,3.A.1.3.19,3.A.1.3.4	-	-	SBP_bac_3
SX1_k127_1112229_0	1297865.APJD01000011_gene6533	0.0	1182.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,3JT1X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Bacterial signalling protein N terminal repeat	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,MHYT,PAS_7,PAS_8,PAS_9
SX1_k127_1116008_0	1230476.C207_05154	0.0	1223.0	COG0668@1|root,COG0668@2|Bacteria,1MY0I@1224|Proteobacteria,2TSIN@28211|Alphaproteobacteria,3JRB0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Mechanosensitive ion channel	-	-	-	ko:K22044	-	-	-	-	ko00000,ko02000	1.A.23.3	-	-	MS_channel
SX1_k127_1116008_1	1297865.APJD01000003_gene6270	0.0	1080.0	COG1222@1|root,COG2127@1|root,COG1222@2|Bacteria,COG2127@2|Bacteria,1R4U1@1224|Proteobacteria,2TRGA@28211|Alphaproteobacteria,3JQS6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	ATP-dependent Clp protease adaptor protein ClpS	-	-	-	-	-	-	-	-	-	-	-	-	AAA,ClpS
SX1_k127_111952_1	1230476.C207_03178	2.482e-139	446.0	COG0306@1|root,COG0306@2|Bacteria,1MVXK@1224|Proteobacteria,2TU98@28211|Alphaproteobacteria,3JSN4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Phosphate transporter family	-	-	-	ko:K03306	-	-	-	-	ko00000	2.A.20	-	-	PHO4
SX1_k127_111952_2	1297865.APJD01000018_gene5661	1.007e-86	293.0	2BSW3@1|root,32MZQ@2|Bacteria,1RB9D@1224|Proteobacteria,2U9SS@28211|Alphaproteobacteria,3JZH5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Family of unknown function (DUF5413)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5413
SX1_k127_111952_0	1297865.APJD01000018_gene5660	2.34e-193	603.0	COG0508@1|root,COG4249@1|root,COG0508@2|Bacteria,COG4249@2|Bacteria,1R954@1224|Proteobacteria,2TWG4@28211|Alphaproteobacteria,3JTD6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Peptidase C14 caspase catalytic subunit p20	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1128651_3	1230476.C207_03875	1.658e-26	108.0	COG0592@1|root,COG0592@2|Bacteria,1MVD9@1224|Proteobacteria,2TSRZ@28211|Alphaproteobacteria,3JUE8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria	dnaN	-	2.7.7.7	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_beta,DNA_pol3_beta_2,DNA_pol3_beta_3
SX1_k127_1128651_2	1297865.APJD01000033_gene6994	3.922e-60	210.0	COG2852@1|root,COG2852@2|Bacteria,1N0QU@1224|Proteobacteria,2UFZ7@28211|Alphaproteobacteria,3JYGV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF559)	-	-	-	-	-	-	-	-	-	-	-	-	DUF559
SX1_k127_1128651_0	1297865.APJD01000033_gene6995	2.132e-242	751.0	COG1195@1|root,COG1195@2|Bacteria,1MX8N@1224|Proteobacteria,2TQRD@28211|Alphaproteobacteria,3JS71@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP	recF	-	-	ko:K03629	ko03440,map03440	-	-	-	ko00000,ko00001,ko03400	-	-	-	AAA_21,AAA_23,SMC_N
SX1_k127_1128651_1	1230476.C207_03877	1.949e-219	682.0	COG0187@1|root,COG0187@2|Bacteria,1MVKT@1224|Proteobacteria,2TRBK@28211|Alphaproteobacteria,3JQQ2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	gyrB	-	5.99.1.3	ko:K02470	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim
SX1_k127_114315_1	1297865.APJD01000007_gene1864	6.898e-55	192.0	2AH98@1|root,317JC@2|Bacteria,1NJZW@1224|Proteobacteria,2UNIC@28211|Alphaproteobacteria,3K1SI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_114315_0	1297865.APJD01000007_gene1863	5.257e-282	870.0	COG2271@1|root,COG2271@2|Bacteria,1MUEK@1224|Proteobacteria,2TS60@28211|Alphaproteobacteria,3JR21@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	MA20_44880	-	-	ko:K13021	-	-	-	-	ko00000,ko02000	2.A.1.14.3	-	-	MFS_1
SX1_k127_1147013_1	1230476.C207_01437	0.0	1075.0	COG4799@1|root,COG4799@2|Bacteria,1MVAX@1224|Proteobacteria,2TRA0@28211|Alphaproteobacteria,3JRYB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Carboxyl transferase domain	mccB	-	6.4.1.4	ko:K01969	ko00280,ko01100,map00280,map01100	M00036	R04138	RC00367,RC00942	ko00000,ko00001,ko00002,ko01000	-	-	-	Carboxyl_trans
SX1_k127_1147013_0	1297865.APJD01000001_gene5870	0.0	1253.0	COG4770@1|root,COG4770@2|Bacteria,1P6RE@1224|Proteobacteria,2TRC2@28211|Alphaproteobacteria,3JRKB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Biotin carboxylase C-terminal domain	mccA	-	6.4.1.3,6.4.1.4	ko:K01965,ko:K01968	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	M00036,M00373,M00741	R01859,R04138	RC00097,RC00367,RC00609,RC00942	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2
SX1_k127_1148402_0	1297865.APJD01000004_gene5285	4.566e-311	955.0	COG1012@1|root,COG1012@2|Bacteria,1MVGW@1224|Proteobacteria,2TR9T@28211|Alphaproteobacteria,3JUI3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	belongs to the aldehyde dehydrogenase family	calB	-	1.2.1.68,1.2.99.10	ko:K00154,ko:K22445	-	-	-	-	ko00000,ko01000	-	-	-	Aldedh
SX1_k127_1162764_1	1297865.APJD01000001_gene5922	1.371e-186	584.0	COG0460@1|root,COG0460@2|Bacteria,1MUDC@1224|Proteobacteria,2TQWS@28211|Alphaproteobacteria,3JTE6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	homoserine dehydrogenase	hom	GO:0003674,GO:0003824,GO:0004412,GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009088,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.1.1.3	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	M00017,M00018	R01773,R01775	RC00087	ko00000,ko00001,ko00002,ko01000	-	-	-	ACT,Homoserine_dh,NAD_binding_3
SX1_k127_1162764_0	1297865.APJD01000001_gene5921	8.232e-212	660.0	COG1494@1|root,COG1494@2|Bacteria,1MUB1@1224|Proteobacteria,2TSPE@28211|Alphaproteobacteria,3JSWJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Bacterial fructose-1,6-bisphosphatase, glpX-encoded	glpX	-	3.1.3.11,3.1.3.37	ko:K02446,ko:K11532	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200	M00003,M00165,M00167	R00762,R01845,R04780	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	FBPase_glpX
SX1_k127_1162764_2	1297865.APJD01000001_gene5920	1.266e-131	420.0	COG1011@1|root,COG1011@2|Bacteria,1MU1H@1224|Proteobacteria,2TQVC@28211|Alphaproteobacteria,3JS84@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Haloacid dehalogenase-like hydrolase	MA20_30570	-	3.8.1.2	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	-	R05287	RC00697	ko00000,ko00001,ko01000	-	-	-	HAD_2
SX1_k127_1171694_4	1297865.APJD01000004_gene5337	3.426e-85	282.0	COG0406@1|root,COG0406@2|Bacteria,1N41V@1224|Proteobacteria,2U09E@28211|Alphaproteobacteria,3JUWF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Phosphoglycerate mutase family	-	-	3.1.3.73	ko:K02226	ko00860,ko01100,map00860,map01100	M00122	R04594,R11173	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	His_Phos_1
SX1_k127_1171694_2	1297865.APJD01000004_gene5336	1.777e-163	516.0	COG1028@1|root,COG1028@2|Bacteria,1MXVZ@1224|Proteobacteria,2TSQ4@28211|Alphaproteobacteria,3JQZU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
SX1_k127_1171694_0	1297865.APJD01000004_gene5335	0.0	1073.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,2TQR7@28211|Alphaproteobacteria,3JSRS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NT	methyl-accepting chemotaxis	MA20_04065	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	MCPsignal,PAS_3,PAS_4
SX1_k127_1171694_3	1297865.APJD01000004_gene5334	1.012e-144	460.0	COG0625@1|root,COG0625@2|Bacteria,1PENB@1224|Proteobacteria,2TRVC@28211|Alphaproteobacteria,3JVHH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, C-terminal domain	gstch9	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_2,GST_N_3
SX1_k127_1171694_6	1297865.APJD01000004_gene5333	6.958e-79	265.0	COG3631@1|root,COG3631@2|Bacteria,1RDKP@1224|Proteobacteria,2U8HD@28211|Alphaproteobacteria,3JYXV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_2
SX1_k127_1171694_1	1297865.APJD01000004_gene5332	2.939e-257	801.0	COG1680@1|root,COG1680@2|Bacteria,1MVPR@1224|Proteobacteria,2TRWZ@28211|Alphaproteobacteria,3JXCI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SX1_k127_1171694_5	1297865.APJD01000004_gene5331	5.488e-81	272.0	COG3795@1|root,COG3795@2|Bacteria,1RCZT@1224|Proteobacteria,2U735@28211|Alphaproteobacteria,3JZ56@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	YCII-related domain	-	-	-	-	-	-	-	-	-	-	-	-	YCII
SX1_k127_1171694_7	1230476.C207_05815	3.872e-14	76.0	COG3795@1|root,COG3795@2|Bacteria,1RCZT@1224|Proteobacteria,2U735@28211|Alphaproteobacteria,3JY2H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	YCII-related domain	MA20_04055	-	-	-	-	-	-	-	-	-	-	-	YCII
SX1_k127_1171984_3	172088.AUGA01000033_gene4562	9.611e-84	280.0	COG2271@1|root,COG2271@2|Bacteria,1MUEK@1224|Proteobacteria,2TS60@28211|Alphaproteobacteria,3JWWC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	-	-	-	ko:K13021	-	-	-	-	ko00000,ko02000	2.A.1.14.3	-	-	MFS_1
SX1_k127_1171984_2	1297865.APJD01000020_gene94	2.136e-183	575.0	COG0583@1|root,COG0583@2|Bacteria,1Q6E2@1224|Proteobacteria,2U2WM@28211|Alphaproteobacteria,3JVQK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	gbpR	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_1171984_0	1297865.APJD01000020_gene95	1.565e-261	806.0	COG5653@1|root,COG5653@2|Bacteria,1MVAR@1224|Proteobacteria,2TTKY@28211|Alphaproteobacteria,3JRH4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_6
SX1_k127_1171984_1	1297865.APJD01000020_gene96	2.075e-230	713.0	COG0726@1|root,COG0726@2|Bacteria,1MVVK@1224|Proteobacteria,2TV75@28211|Alphaproteobacteria,3JTJU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
SX1_k127_1171984_4	1122963.AUHB01000018_gene2084	8.185e-70	240.0	COG0030@1|root,COG0030@2|Bacteria,1R0K7@1224|Proteobacteria,2U8JF@28211|Alphaproteobacteria	28211|Alphaproteobacteria	J	Ribosomal RNA adenine dimethylase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
SX1_k127_1176097_3	1297865.APJD01000028_gene5189	8.345e-27	109.0	COG1807@1|root,COG1807@2|Bacteria,1QIUU@1224|Proteobacteria,2TWT1@28211|Alphaproteobacteria,3JTS7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Dolichyl-phosphate-mannose-protein mannosyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	PMT_2
SX1_k127_1176097_0	1297865.APJD01000028_gene5188	0.0	1420.0	COG4206@1|root,COG4206@2|Bacteria,1N71E@1224|Proteobacteria,2TU7B@28211|Alphaproteobacteria,3JVXG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SX1_k127_1176097_2	1297865.APJD01000028_gene5187	4.052e-90	297.0	COG0864@1|root,COG0864@2|Bacteria,1RK4R@1224|Proteobacteria,2U9KJ@28211|Alphaproteobacteria,3JWZM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Transcriptional regulator	nikR	GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	ko:K07722	-	-	-	-	ko00000,ko03000	-	-	-	NikR_C,RHH_1
SX1_k127_1176097_1	1297865.APJD01000028_gene5186	2.571e-119	383.0	COG0119@1|root,COG0119@2|Bacteria,1MUMX@1224|Proteobacteria,2TT1R@28211|Alphaproteobacteria,3JWVK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	HMGL-like	-	-	4.1.3.4	ko:K01640	ko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146	M00036,M00088	R01360,R08090	RC00502,RC00503,RC01118,RC01946	ko00000,ko00001,ko00002,ko01000	-	-	-	HMGL-like
SX1_k127_1193439_2	1297865.APJD01000005_gene4008	2.498e-168	529.0	COG3210@1|root,COG3210@2|Bacteria,1MXIP@1224|Proteobacteria,2TTVB@28211|Alphaproteobacteria,3JV1M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	TIGRFAM filamentous haemagglutinin family outer membrane protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF3739,Haemagg_act
SX1_k127_1193439_0	1297865.APJD01000005_gene4009	0.0	1319.0	COG0226@1|root,COG0226@2|Bacteria,1PZ5I@1224|Proteobacteria,2TVJD@28211|Alphaproteobacteria,3JXFQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	PBP superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	PBP_like_2
SX1_k127_1193439_1	1297865.APJD01000052_gene1223	6.64e-232	718.0	COG0226@1|root,COG0226@2|Bacteria,1PZ5I@1224|Proteobacteria,2TVJD@28211|Alphaproteobacteria,3JWQV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	PBP superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	PBP_like_2
SX1_k127_1194254_0	1380391.JIAS01000002_gene3200	7.442e-125	402.0	COG1137@1|root,COG1137@2|Bacteria,1MU8M@1224|Proteobacteria,2TR7F@28211|Alphaproteobacteria,2JPX9@204441|Rhodospirillales	204441|Rhodospirillales	S	ABC transporter, ATP-binding protein	lptB	-	-	ko:K06861	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	1.B.42.1	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_1194254_1	1380391.JIAS01000002_gene3201	5.629e-72	252.0	COG1508@1|root,COG1508@2|Bacteria,1MW4V@1224|Proteobacteria,2TS41@28211|Alphaproteobacteria,2JPA9@204441|Rhodospirillales	204441|Rhodospirillales	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	rpoN	-	-	ko:K03092	ko02020,ko05111,map02020,map05111	-	-	-	ko00000,ko00001,ko03021	-	-	-	Sigma54_AID,Sigma54_CBD,Sigma54_DBD
SX1_k127_1206362_9	1297865.APJD01000014_gene763	3.282e-09	57.0	2CG5P@1|root,302N0@2|Bacteria,1NDN3@1224|Proteobacteria,2UHZN@28211|Alphaproteobacteria,3K17R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1206362_8	1297865.APJD01000014_gene762	5.989e-31	126.0	2AE09@1|root,301G4@2|Bacteria,1N7RU@1224|Proteobacteria,2UFHZ@28211|Alphaproteobacteria,3K187@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1206362_0	1297865.APJD01000014_gene761	1.491e-150	477.0	COG1470@1|root,COG1470@2|Bacteria,1Q2PZ@1224|Proteobacteria,2UIWU@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	PEP-CTERM motif	-	-	-	-	-	-	-	-	-	-	-	-	PA14,VPEP
SX1_k127_1206362_6	1297865.APJD01000014_gene760	1.441e-82	290.0	2AD7E@1|root,312WC@2|Bacteria,1RADF@1224|Proteobacteria,2U8PK@28211|Alphaproteobacteria,3JY3M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1206362_1	1297865.APJD01000014_gene759	2.662e-148	470.0	COG0412@1|root,COG0412@2|Bacteria,1NKIB@1224|Proteobacteria,2U933@28211|Alphaproteobacteria,3JWI1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Dienelactone hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	DLH
SX1_k127_1206362_4	1297865.APJD01000014_gene758	3.978e-97	318.0	28ZQ8@1|root,2ZMF7@2|Bacteria,1RGIF@1224|Proteobacteria,2TSYN@28211|Alphaproteobacteria,3JX91@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1206362_5	1297865.APJD01000014_gene757	1.621e-96	316.0	2A6SQ@1|root,30VKY@2|Bacteria,1RAG4@1224|Proteobacteria,2U5BI@28211|Alphaproteobacteria,3JYA3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1206362_7	1297865.APJD01000014_gene756	4.743e-81	286.0	COG0251@1|root,COG0251@2|Bacteria,1RCX5@1224|Proteobacteria,2U74Y@28211|Alphaproteobacteria,3JYGB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Endoribonuclease L-PSP	yjgH	-	-	-	-	-	-	-	-	-	-	-	Ribonuc_L-PSP
SX1_k127_1206362_2	1297865.APJD01000014_gene755	4.528e-118	381.0	COG1309@1|root,COG1309@2|Bacteria,1R5GP@1224|Proteobacteria,2U5WC@28211|Alphaproteobacteria,3JVJ3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_1206362_3	1297865.APJD01000014_gene754	3.06e-117	377.0	COG0566@1|root,COG0566@2|Bacteria,1MWCM@1224|Proteobacteria,2TUG7@28211|Alphaproteobacteria,3JQYK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family	rlmB	-	2.1.1.185	ko:K03218	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	SpoU_methylase,SpoU_sub_bind
SX1_k127_121660_3	1297865.APJD01000006_gene4362	6.306e-158	498.0	COG0665@1|root,COG0665@2|Bacteria,1MXM0@1224|Proteobacteria,2TRR8@28211|Alphaproteobacteria,3JWH9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	FAD dependent oxidoreductase	MA20_04230	-	1.5.3.1	ko:K00303	ko00260,ko01100,map00260,map01100	-	R00610	RC00060,RC00557	ko00000,ko00001,ko01000	-	-	-	DAO
SX1_k127_121660_5	1297865.APJD01000006_gene4363	1.38e-66	227.0	COG0251@1|root,COG0251@2|Bacteria,1RDJX@1224|Proteobacteria,2U7F4@28211|Alphaproteobacteria,3JYT7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Endoribonuclease L-PSP	MA20_04225	-	-	-	-	-	-	-	-	-	-	-	Ribonuc_L-PSP
SX1_k127_121660_2	1230476.C207_04937	4.331e-203	633.0	COG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2TQWK@28211|Alphaproteobacteria,3JSD4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter family receptor	-	-	-	-	-	-	-	-	-	-	-	-	TctC
SX1_k127_121660_1	1297865.APJD01000006_gene4365	3.62e-203	636.0	COG2358@1|root,COG2358@2|Bacteria,1NRH6@1224|Proteobacteria,2TT34@28211|Alphaproteobacteria,3JTPF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	NMT1-like family	-	-	-	ko:K07080	-	-	-	-	ko00000	-	-	-	NMT1_3
SX1_k127_121660_0	1297865.APJD01000006_gene4366	1.382e-256	805.0	COG0683@1|root,COG0683@2|Bacteria,1MUCB@1224|Proteobacteria,2U0U4@28211|Alphaproteobacteria,3JTUS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein domain	MA20_10205	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_121660_4	1297865.APJD01000006_gene4367	1.083e-109	355.0	COG0303@1|root,COG0303@2|Bacteria,1PDCE@1224|Proteobacteria,2TR67@28211|Alphaproteobacteria,3JS3P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	MoeA N-terminal region (domain I and II)	-	-	-	-	-	-	-	-	-	-	-	-	MoCF_biosynth,MoeA_C,MoeA_N
SX1_k127_1216760_7	1297865.APJD01000011_gene6806	4.403e-17	81.0	COG1287@1|root,COG1287@2|Bacteria,1N1IK@1224|Proteobacteria,2TUYH@28211|Alphaproteobacteria,3JSAB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	oligosaccharyl transferase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1216760_2	398525.KB900701_gene2300	2.711e-189	593.0	COG3000@1|root,COG3000@2|Bacteria,1MW5G@1224|Proteobacteria,2TU63@28211|Alphaproteobacteria,3JRZR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Fatty acid hydroxylase superfamily	MA20_18405	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
SX1_k127_1216760_6	1297865.APJD01000011_gene6804	3.56e-23	100.0	COG3847@1|root,COG3847@2|Bacteria,1NGVU@1224|Proteobacteria,2UJE8@28211|Alphaproteobacteria,3K0VE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Flp Fap pilin component	MA20_03885	-	-	ko:K02651	ko04112,map04112	-	-	-	ko00000,ko00001,ko02035,ko02044	-	-	-	Flp_Fap
SX1_k127_1216760_5	1297865.APJD01000011_gene6803	1.882e-107	348.0	COG4960@1|root,COG4960@2|Bacteria,1RAYG@1224|Proteobacteria,2TSVX@28211|Alphaproteobacteria,3JYGP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	OU	Type IV leader peptidase family	cpaA	-	3.4.23.43	ko:K02278	-	-	-	-	ko00000,ko01000,ko02035,ko02044	-	-	-	Peptidase_A24
SX1_k127_1216760_3	1297865.APJD01000011_gene6802	1.731e-162	512.0	COG3745@1|root,COG3745@2|Bacteria,1MW75@1224|Proteobacteria,2TTPE@28211|Alphaproteobacteria,3JTGM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	pilus assembly protein CpaB	cpaB	-	-	ko:K02279	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	RcpC,SAF
SX1_k127_1216760_0	1297865.APJD01000011_gene6801	3.6e-293	909.0	COG4964@1|root,COG4964@2|Bacteria,1MV8G@1224|Proteobacteria,2TRNN@28211|Alphaproteobacteria,3JSR1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Belongs to the GSP D family	cpaC	-	-	ko:K02280	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	BON,Secretin,T2SS-T3SS_pil_N
SX1_k127_1216760_4	1297865.APJD01000011_gene6800	6.048e-161	509.0	COG5461@1|root,COG5461@2|Bacteria,1MWWE@1224|Proteobacteria,2TU2Q@28211|Alphaproteobacteria,3JQNJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	TIGRFAM pilus (Caulobacter type) biogenesis lipoprotein CpaD	cpaD	-	-	ko:K02281	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	Pilus_CpaD
SX1_k127_1216760_1	1297865.APJD01000011_gene6799	5.891e-213	664.0	COG4963@1|root,COG4963@2|Bacteria,1MWNY@1224|Proteobacteria,2TUDS@28211|Alphaproteobacteria,3JUM3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	AAA domain	cpaE	-	-	ko:K02282	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	AAA_31,CBP_BcsQ
SX1_k127_1222272_0	1297865.APJD01000003_gene6353	1.582e-214	668.0	COG0174@1|root,COG0174@2|Bacteria,1MU6V@1224|Proteobacteria,2VG5K@28211|Alphaproteobacteria,3JTG6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the glutamine synthetase family	MA20_22530	-	6.3.1.2	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	-	R00253	RC00010,RC02798	ko00000,ko00001,ko01000,ko04147	-	-	-	Gln-synt_C,Gln-synt_N_2
SX1_k127_1222272_3	1038860.AXAP01000010_gene7734	6.919e-137	437.0	COG0410@1|root,COG0410@2|Bacteria,1MVYI@1224|Proteobacteria,2TSRT@28211|Alphaproteobacteria,3JR1U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ABC transporter	MA20_22545	-	-	ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran
SX1_k127_1222272_2	1297865.APJD01000003_gene6351	1.59e-153	487.0	COG0411@1|root,COG0411@2|Bacteria,1MXHT@1224|Proteobacteria,2TSWS@28211|Alphaproteobacteria,3JT2Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid ATP-binding cassette transporter	MA20_22550	-	-	ko:K01995	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_1222272_1	1297865.APJD01000003_gene6350	2.356e-172	541.0	COG4177@1|root,COG4177@2|Bacteria,1MUPI@1224|Proteobacteria,2TSID@28211|Alphaproteobacteria,3JU2M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	MA20_22555	-	-	ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_1224154_2	1297865.APJD01000023_gene1148	5.751e-221	686.0	COG0402@1|root,COG0402@2|Bacteria,1MX34@1224|Proteobacteria,2U0IN@28211|Alphaproteobacteria,3JVRN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Amidohydrolase family	-	-	3.5.4.1	ko:K01485	ko00240,ko00330,ko01100,map00240,map00330,map01100	-	R00974,R01411,R02922	RC00074,RC00514,RC00809	ko00000,ko00001,ko01000	-	-	-	Amidohydro_1,Amidohydro_3,MGS
SX1_k127_1224154_0	1297865.APJD01000023_gene1147	1.187e-270	835.0	COG0477@1|root,COG2814@2|Bacteria,1QTW0@1224|Proteobacteria,2TSC6@28211|Alphaproteobacteria,3JVT2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
SX1_k127_1224154_4	1297865.APJD01000023_gene1146	3.655e-37	142.0	2CC28@1|root,34BMI@2|Bacteria,1N71Q@1224|Proteobacteria,2UGXB@28211|Alphaproteobacteria,3K1M0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1224154_3	172088.AUGA01000012_gene7244	1.278e-147	470.0	COG1659@1|root,COG1659@2|Bacteria,1QKHQ@1224|Proteobacteria,2TUWD@28211|Alphaproteobacteria,3JVHM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Encapsulating protein for peroxidase	-	-	-	-	-	-	-	-	-	-	-	-	Linocin_M18
SX1_k127_1224154_1	1297865.APJD01000023_gene1144	5.927e-231	717.0	COG2837@1|root,COG2837@2|Bacteria,1MWDD@1224|Proteobacteria,2TVIX@28211|Alphaproteobacteria,3JTZU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Dyp-type peroxidase family	-	-	-	ko:K07223	-	-	-	-	ko00000	-	-	-	Dyp_perox
SX1_k127_1225671_1	1297865.APJD01000047_gene4793	2.371e-86	285.0	COG1529@1|root,COG1529@2|Bacteria,1MUEA@1224|Proteobacteria,2TQMW@28211|Alphaproteobacteria,3JS8F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain	MA20_08005	-	1.2.5.3	ko:K03520	-	-	R11168	RC02800	ko00000,ko01000	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2
SX1_k127_1225671_2	1230476.C207_01327	1.116e-83	287.0	COG3909@1|root,COG3909@2|Bacteria,1N6Z5@1224|Proteobacteria,2U5I1@28211|Alphaproteobacteria,3JY1R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome C'	cycF	GO:0005575,GO:0005623,GO:0042597,GO:0044464	-	-	-	-	-	-	-	-	-	-	Cytochrom_C_2
SX1_k127_1225671_3	1297865.APJD01000047_gene4791	6.311e-82	273.0	COG2335@1|root,COG2335@2|Bacteria,1MZ8G@1224|Proteobacteria,2U5ZN@28211|Alphaproteobacteria,3JY4R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	A domain in the BMP inhibitor chordin and in microbial proteins.	-	-	-	-	-	-	-	-	-	-	-	-	CHRD
SX1_k127_1225671_0	1297865.APJD01000047_gene4790	1.121e-181	567.0	COG2010@1|root,COG2010@2|Bacteria,1MV6D@1224|Proteobacteria,2TT9U@28211|Alphaproteobacteria,3JSQ0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome c, mono- and diheme variants	cycG	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
SX1_k127_1225671_4	1297865.APJD01000047_gene4790	5.926e-12	65.0	COG2010@1|root,COG2010@2|Bacteria,1MV6D@1224|Proteobacteria,2TT9U@28211|Alphaproteobacteria,3JSQ0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome c, mono- and diheme variants	cycG	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
SX1_k127_1242395_6	398525.KB900701_gene3273	9.496e-30	120.0	COG3624@1|root,COG3624@2|Bacteria,1MZTZ@1224|Proteobacteria,2UD64@28211|Alphaproteobacteria,3JY3S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Phosphonate metabolism protein PhnG	phnG	GO:0005575,GO:0006793,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0019634,GO:0019637,GO:0019700,GO:0032991,GO:0044237,GO:0046434,GO:0061694,GO:0061695,GO:0071704,GO:1901575,GO:1902494,GO:1904176,GO:1990234	2.7.8.37	ko:K06166	ko00440,map00440	-	R10185	RC00005,RC00063	ko00000,ko00001,ko01000	-	-	-	PhnG
SX1_k127_1242395_4	1297865.APJD01000007_gene2097	1.799e-150	477.0	COG2188@1|root,COG2188@2|Bacteria,1Q856@1224|Proteobacteria,2TSMX@28211|Alphaproteobacteria,3JS51@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	UTRA	phnF	-	-	ko:K02043	-	-	-	-	ko00000,ko03000	-	-	-	GntR,UTRA
SX1_k127_1242395_3	1297865.APJD01000007_gene2096	1.141e-167	537.0	COG3639@1|root,COG3639@2|Bacteria,1MW4F@1224|Proteobacteria,2TTXJ@28211|Alphaproteobacteria,3JSAC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	phosphonate ABC transporter	MA20_21480	-	-	ko:K02042	ko02010,map02010	M00223	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.9	-	-	BPD_transp_1
SX1_k127_1242395_1	1297865.APJD01000007_gene2095	1.781e-184	578.0	COG3639@1|root,COG3639@2|Bacteria,1MW4F@1224|Proteobacteria,2TUNJ@28211|Alphaproteobacteria,3JQNT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Binding-protein-dependent transport system inner membrane component	MA20_21485	-	-	ko:K02042	ko02010,map02010	M00223	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.9	-	-	BPD_transp_1
SX1_k127_1242395_0	1297865.APJD01000007_gene2094	4.548e-199	623.0	COG3221@1|root,COG3221@2|Bacteria,1MXD8@1224|Proteobacteria,2TQMQ@28211|Alphaproteobacteria,3JQVM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Phosphonate ABC transporter	MA20_21490	-	-	ko:K02044	ko02010,map02010	M00223	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.9	-	-	Phosphonate-bd
SX1_k127_1242395_2	1297865.APJD01000007_gene2093	1.081e-169	534.0	COG3638@1|root,COG3638@2|Bacteria,1MVE9@1224|Proteobacteria,2TRR3@28211|Alphaproteobacteria,3JQYU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system	phnC	-	3.6.3.28	ko:K02041	ko02010,map02010	M00223	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.9	-	-	ABC_tran
SX1_k127_1242395_5	1230476.C207_03004	2.061e-116	376.0	COG0110@1|root,COG0110@2|Bacteria,1MUCJ@1224|Proteobacteria,2TSYD@28211|Alphaproteobacteria,3JSPV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bacterial transferase hexapeptide (six repeats)	-	-	2.3.1.28	ko:K00638	-	-	-	-	br01600,ko00000,ko01000,ko01504	-	-	-	Hexapep
SX1_k127_1247151_2	1297865.APJD01000036_gene1545	2.721e-99	325.0	COG1893@1|root,COG1893@2|Bacteria,1QMH8@1224|Proteobacteria,2TSGW@28211|Alphaproteobacteria,3JWCH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid	MA20_00225	-	-	-	-	-	-	-	-	-	-	-	ApbA
SX1_k127_1247151_0	1297865.APJD01000036_gene1544	3.31e-248	779.0	COG1309@1|root,COG1309@2|Bacteria,1P5JE@1224|Proteobacteria,2U2E1@28211|Alphaproteobacteria,3JVDJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_1247151_1	1297865.APJD01000036_gene1543	6.983e-248	767.0	COG0683@1|root,COG0683@2|Bacteria,1MWH7@1224|Proteobacteria,2TS8K@28211|Alphaproteobacteria,3JUFA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein domain	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_1249939_11	1297865.APJD01000020_gene81	1.483e-20	90.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JSR7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	-	-	-	ko:K00666	-	-	-	-	ko00000,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_1249939_1	1297865.APJD01000020_gene81	2.167e-268	827.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JSR7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	-	-	-	ko:K00666	-	-	-	-	ko00000,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_1249939_6	1297865.APJD01000020_gene82	1.27e-205	656.0	COG2421@1|root,COG2421@2|Bacteria,1MXKY@1224|Proteobacteria,2TSVA@28211|Alphaproteobacteria,3JSXD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Acetamidase/Formamidase family	MA20_36855	-	-	-	-	-	-	-	-	-	-	-	FmdA_AmdA
SX1_k127_1249939_8	1297865.APJD01000020_gene83	9.772e-163	513.0	COG1434@1|root,COG1434@2|Bacteria,1MVW8@1224|Proteobacteria,2U6XK@28211|Alphaproteobacteria,3JVS4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	DUF218 domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF218
SX1_k127_1249939_7	1297865.APJD01000020_gene84	3.493e-171	538.0	COG2043@1|root,COG2043@2|Bacteria,1NR18@1224|Proteobacteria,2TVGP@28211|Alphaproteobacteria,3JU0D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterised ArCR, COG2043	MA20_36865	-	-	-	-	-	-	-	-	-	-	-	DUF169
SX1_k127_1249939_3	1297865.APJD01000020_gene85	1.634e-257	794.0	COG3268@1|root,COG3268@2|Bacteria,1MVI3@1224|Proteobacteria,2TV1G@28211|Alphaproteobacteria,3JR52@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Saccharopine dehydrogenase NADP binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Sacchrp_dh_NADP
SX1_k127_1249939_4	398525.KB900701_gene5327	9.588e-254	784.0	COG0654@1|root,COG0654@2|Bacteria,1MWWT@1224|Proteobacteria,2TUGT@28211|Alphaproteobacteria,3JRKG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	FAD binding domain	MA20_36880	-	1.14.13.1,1.14.13.113,1.14.13.114	ko:K00480,ko:K14974,ko:K16839	ko00230,ko00621,ko00624,ko00626,ko00760,ko01100,ko01120,ko01220,map00230,map00621,map00624,map00626,map00760,map01100,map01120,map01220	M00546,M00622	R00818,R05632,R06915,R06936,R06939,R08764,R09514	RC00115,RC00389,RC02551	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_3
SX1_k127_1249939_10	113395.AXAI01000004_gene4385	3.413e-66	229.0	COG1846@1|root,COG1846@2|Bacteria,1N6YD@1224|Proteobacteria,2U0SG@28211|Alphaproteobacteria,3JSZ7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	MA20_36885	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SX1_k127_1249939_2	1297865.APJD01000020_gene88	3.864e-267	824.0	COG3307@1|root,COG3307@2|Bacteria,1MWJM@1224|Proteobacteria,2TRG6@28211|Alphaproteobacteria,3JUWK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	-O-antigen	MA20_36890	-	-	-	-	-	-	-	-	-	-	-	Wzy_C
SX1_k127_1249939_0	1297865.APJD01000020_gene89	0.0	1000.0	COG2148@1|root,COG2148@2|Bacteria,1MV6W@1224|Proteobacteria,2TRZA@28211|Alphaproteobacteria,3JSJ2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	CoA-binding domain	wcaJ	-	-	ko:K03606,ko:K20997	ko02025,ko05111,map02025,map05111	-	-	-	ko00000,ko00001	-	-	-	Bac_transf,CoA_binding_3
SX1_k127_1249939_5	1297865.APJD01000020_gene90	1.052e-242	750.0	COG0438@1|root,COG0438@2|Bacteria,1MVKK@1224|Proteobacteria,2TSHP@28211|Alphaproteobacteria,3JTSD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	glycosyl transferase group 1	MA20_36900	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
SX1_k127_1249939_9	1297865.APJD01000020_gene91	3.015e-106	344.0	COG1596@1|root,COG1596@2|Bacteria,1MXYS@1224|Proteobacteria,2U93S@28211|Alphaproteobacteria,3JWHE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Polysaccharide biosynthesis/export protein	gumB	-	-	ko:K01991	ko02026,map02026	-	-	-	ko00000,ko00001,ko02000	1.B.18	-	-	Poly_export,SLBB
SX1_k127_125355_6	1297865.APJD01000028_gene5241	8.414e-138	438.0	COG0135@1|root,COG0135@2|Bacteria,1RA87@1224|Proteobacteria,2U7CH@28211|Alphaproteobacteria,3JRQW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the TrpF family	trpF	-	5.3.1.24	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00023	R03509	RC00945	ko00000,ko00001,ko00002,ko01000	-	-	-	PRAI
SX1_k127_125355_2	1297865.APJD01000028_gene5242	3.179e-269	831.0	COG0133@1|root,COG0133@2|Bacteria,1MUS8@1224|Proteobacteria,2TSHK@28211|Alphaproteobacteria,3JSNN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine	trpB	GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	4.2.1.20	ko:K01696	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	M00023	R00674,R02340,R02722	RC00209,RC00210,RC00700,RC00701,RC02868	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
SX1_k127_125355_8	1230476.C207_02278	1.202e-59	219.0	COG2852@1|root,COG2852@2|Bacteria,1N0QU@1224|Proteobacteria,2UFZ7@28211|Alphaproteobacteria,3JZVC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF559)	-	-	-	-	-	-	-	-	-	-	-	-	DUF559
SX1_k127_125355_4	1297865.APJD01000028_gene5244	1.439e-171	539.0	COG0159@1|root,COG0159@2|Bacteria,1MXJV@1224|Proteobacteria,2TQN2@28211|Alphaproteobacteria,3JSKX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate	trpA	-	4.2.1.20	ko:K01695	ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230	M00023	R00674,R02340,R02722	RC00209,RC00210,RC00700,RC00701,RC02868	ko00000,ko00001,ko00002,ko01000	-	-	-	Trp_syntA
SX1_k127_125355_3	1297865.APJD01000028_gene5245	3.147e-200	626.0	COG0777@1|root,COG0777@2|Bacteria,1MW8G@1224|Proteobacteria,2TRSH@28211|Alphaproteobacteria,3JSZ0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA	accD	-	2.1.3.15,6.4.1.2	ko:K01963	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742,R04386	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	Carboxyl_trans
SX1_k127_125355_1	1297865.APJD01000028_gene5246	6.662e-283	888.0	COG0285@1|root,COG0285@2|Bacteria,1MVCH@1224|Proteobacteria,2TR64@28211|Alphaproteobacteria,3JTEY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Belongs to the folylpolyglutamate synthase family	folC	-	6.3.2.12,6.3.2.17	ko:K11754	ko00790,ko01100,map00790,map01100	M00126,M00841	R00942,R02237,R04241	RC00064,RC00090,RC00162	ko00000,ko00001,ko00002,ko01000	-	-	-	Mur_ligase_M
SX1_k127_125355_5	1297865.APJD01000028_gene5247	3.694e-162	511.0	COG0639@1|root,COG0639@2|Bacteria,1N4BG@1224|Proteobacteria,2TR4D@28211|Alphaproteobacteria,3JSJP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Calcineurin-like phosphoesterase superfamily domain	MA20_24125	-	-	-	-	-	-	-	-	-	-	-	Metallophos_2
SX1_k127_125355_7	172088.AUGA01000027_gene106	9.162e-64	220.0	COG3118@1|root,COG3118@2|Bacteria,1MZBB@1224|Proteobacteria,2UCCR@28211|Alphaproteobacteria,3JYUR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Belongs to the thioredoxin family	trxA	-	-	ko:K03671	ko04621,ko05418,map04621,map05418	-	-	-	ko00000,ko00001,ko03110	-	-	-	Thioredoxin
SX1_k127_125355_0	1297865.APJD01000028_gene5249	0.0	2255.0	COG1074@1|root,COG1074@2|Bacteria,1MUTF@1224|Proteobacteria,2TQJZ@28211|Alphaproteobacteria,3JSGA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Belongs to the helicase family. UvrD subfamily	addA	-	3.6.4.12	ko:K16898	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	PDDEXK_1,UvrD-helicase,UvrD_C
SX1_k127_1260001_1	1297865.APJD01000014_gene559	1.406e-183	575.0	COG0697@1|root,COG0697@2|Bacteria,1PB22@1224|Proteobacteria,2U158@28211|Alphaproteobacteria,3JUX7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_1260001_2	1297865.APJD01000014_gene560	6.125e-135	448.0	COG1994@1|root,COG1994@2|Bacteria,1NSFF@1224|Proteobacteria,2TRIF@28211|Alphaproteobacteria,3JT09@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Peptidase M50	MA20_27160	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M50
SX1_k127_1260001_3	1297865.APJD01000014_gene561	6.716e-94	308.0	2A6WF@1|root,30VR7@2|Bacteria,1RB57@1224|Proteobacteria,2U5TP@28211|Alphaproteobacteria,3JYC5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1260001_0	1297865.APJD01000014_gene562	1.275e-251	780.0	COG0683@1|root,COG0683@2|Bacteria,1MUCB@1224|Proteobacteria,2TRWV@28211|Alphaproteobacteria,3JS24@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein domain	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_1260752_10	1297865.APJD01000007_gene2330	6.322e-69	246.0	COG0444@1|root,COG0444@2|Bacteria,1R4KB@1224|Proteobacteria,2TR0J@28211|Alphaproteobacteria,3JUED@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Oligopeptide/dipeptide transporter, C-terminal region	MA20_17235	-	-	ko:K02031	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
SX1_k127_1260752_9	189753.AXAS01000035_gene1350	1.069e-82	284.0	COG1173@1|root,COG1173@2|Bacteria,1NBRX@1224|Proteobacteria,2TWH0@28211|Alphaproteobacteria,3JU5U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02034	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
SX1_k127_1260752_6	1297865.APJD01000007_gene2328	6.464e-193	603.0	COG0601@1|root,COG0601@2|Bacteria,1MU8Z@1224|Proteobacteria,2TUQ6@28211|Alphaproteobacteria,3JVGN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Binding-protein-dependent transport system inner membrane component	MA20_17245	-	-	ko:K02033	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
SX1_k127_1260752_0	1230476.C207_06192	0.0	1032.0	COG0747@1|root,COG0747@2|Bacteria,1MUZH@1224|Proteobacteria,2TU1J@28211|Alphaproteobacteria,3JW7B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Bacterial extracellular solute-binding proteins, family 5 Middle	MA20_17250	-	-	ko:K02035	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	SBP_bac_5
SX1_k127_1260752_3	1230476.C207_06191	1.368e-259	803.0	COG1804@1|root,COG1804@2|Bacteria,1MU2K@1224|Proteobacteria,2TRB6@28211|Alphaproteobacteria,3JS4V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA-transferase family III	MA20_17255	-	2.8.3.16	ko:K07749	-	-	-	-	ko00000,ko01000	-	-	-	CoA_transf_3
SX1_k127_1260752_2	1230476.C207_06190	1.596e-305	942.0	COG0297@1|root,COG0297@2|Bacteria,1MUGM@1224|Proteobacteria,2TT73@28211|Alphaproteobacteria,3JS05@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Synthesizes alpha-1,4-glucan chains using ADP-glucose	MA20_17260	GO:0003674,GO:0003824,GO:0016740,GO:0016757	2.4.1.21	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	M00565	R02421	RC00005	ko00000,ko00001,ko00002,ko01000,ko01003	-	GT5	-	Glyco_transf_5,Glycos_transf_1
SX1_k127_1260752_5	1297865.APJD01000007_gene2324	9.64e-226	701.0	COG0500@1|root,COG0500@2|Bacteria,1N3PV@1224|Proteobacteria,2TVNH@28211|Alphaproteobacteria,3JUBW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	O-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_31
SX1_k127_1260752_1	1297865.APJD01000007_gene2323	5e-324	995.0	COG1376@1|root,COG1376@2|Bacteria,1MX14@1224|Proteobacteria,2TS68@28211|Alphaproteobacteria,3JU1F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	L,D-transpeptidase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	YkuD
SX1_k127_1260752_4	1297865.APJD01000007_gene2322	7.23e-248	769.0	COG0477@1|root,COG2814@2|Bacteria,1N8TD@1224|Proteobacteria,2TTRZ@28211|Alphaproteobacteria,3JREB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major facilitator Superfamily	MA20_17370	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_1260752_7	1297865.APJD01000007_gene2321	2.683e-92	305.0	COG3861@1|root,COG3861@2|Bacteria,1R6C3@1224|Proteobacteria,2UDUU@28211|Alphaproteobacteria,3JU9P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PRC-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	PRC
SX1_k127_1260752_8	1297865.APJD01000007_gene2320	3.581e-86	285.0	COG3408@1|root,COG3408@2|Bacteria,1MUYU@1224|Proteobacteria,2TQK2@28211|Alphaproteobacteria,3JSVR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	N-terminal domain of (some) glycogen debranching enzymes	MA20_17380	-	-	-	-	-	-	-	-	-	-	-	Bac_rhamnosid6H,GDE_C,GDE_N_bis
SX1_k127_1271483_0	1297865.APJD01000001_gene5941	5.886e-315	966.0	COG4249@1|root,COG4249@2|Bacteria,1MX7B@1224|Proteobacteria,2TUDI@28211|Alphaproteobacteria,3JRZ9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Caspase domain	MA20_30665	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14
SX1_k127_1271483_2	1297865.APJD01000001_gene5942	1.467e-182	575.0	COG2207@1|root,COG2207@2|Bacteria,1N3QH@1224|Proteobacteria,2U1E7@28211|Alphaproteobacteria,3JWG5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding_2,HTH_18
SX1_k127_1271483_3	1297865.APJD01000001_gene5943	9.253e-139	441.0	COG1309@1|root,COG1309@2|Bacteria,1RJCM@1224|Proteobacteria,2UB9M@28211|Alphaproteobacteria,3JZVU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_1271483_4	1230476.C207_01363	1.623e-112	370.0	COG2207@1|root,COG2207@2|Bacteria,1RCPH@1224|Proteobacteria,2U6YY@28211|Alphaproteobacteria,3JYKA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
SX1_k127_1271483_1	1297865.APJD01000001_gene5945	2.015e-202	635.0	COG0513@1|root,COG0513@2|Bacteria,1MU49@1224|Proteobacteria,2TR6Q@28211|Alphaproteobacteria,3JS2G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Belongs to the DEAD box helicase family	rhlE	-	3.6.4.13	ko:K03732,ko:K11927	ko03018,map03018	M00394	-	-	ko00000,ko00001,ko00002,ko01000,ko03019	-	-	-	DEAD,Helicase_C
SX1_k127_1273860_0	1297865.APJD01000005_gene3483	0.0	1281.0	COG2609@1|root,COG2609@2|Bacteria,1MV21@1224|Proteobacteria,2TSZ9@28211|Alphaproteobacteria,3JRFU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)	MA20_17010	-	1.2.4.1	ko:K00163	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200	M00307	R00014,R00209,R01699,R03270	RC00004,RC00027,RC00627,RC02742,RC02744,RC02882	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Transketolase_N
SX1_k127_1273860_1	1297865.APJD01000005_gene3482	1.8e-34	137.0	COG1522@1|root,COG1522@2|Bacteria,1MX7R@1224|Proteobacteria,2VG6E@28211|Alphaproteobacteria,3JSFH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix ASNC type	MA20_17015	-	-	ko:K03719	-	-	-	-	ko00000,ko03000,ko03036	-	-	-	AsnC_trans_reg,HTH_24
SX1_k127_1274385_9	1297865.APJD01000009_gene2813	1.851e-106	346.0	COG0345@1|root,COG0345@2|Bacteria,1R5J1@1224|Proteobacteria,2TTY7@28211|Alphaproteobacteria,3JR3K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline	proC	GO:0003674,GO:0003824,GO:0004735,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.5.1.2	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	M00015	R01248,R01251,R03291,R03293	RC00054,RC00083	ko00000,ko00001,ko00002,ko01000	-	-	-	F420_oxidored,P5CR_dimer
SX1_k127_1274385_11	1297865.APJD01000009_gene2814	6.896e-73	246.0	COG5496@1|root,COG5496@2|Bacteria,1RKFT@1224|Proteobacteria,2U5DE@28211|Alphaproteobacteria,3JY0F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Thioesterase	MA20_05495	-	-	-	-	-	-	-	-	-	-	-	4HBT
SX1_k127_1274385_12	1297865.APJD01000009_gene2815	2.544e-54	193.0	COG1942@1|root,COG1942@2|Bacteria,1MZXR@1224|Proteobacteria,2UG0Q@28211|Alphaproteobacteria,3K18H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tautomerase enzyme	MA20_05500	-	5.3.2.6	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	M00569	R03966,R05389	RC01040,RC01355	ko00000,ko00001,ko00002,ko01000	-	-	-	Tautomerase
SX1_k127_1274385_1	1297865.APJD01000009_gene2816	0.0	1009.0	COG0124@1|root,COG0124@2|Bacteria,1MV2K@1224|Proteobacteria,2TSTH@28211|Alphaproteobacteria,3JSAY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	histidyl-tRNA aminoacylation	hisS	-	6.1.1.21	ko:K01892	ko00970,map00970	M00359,M00360	R03655	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,tRNA-synt_His
SX1_k127_1274385_3	1297865.APJD01000009_gene2817	6.97e-238	737.0	COG0115@1|root,COG0115@2|Bacteria,1MVB0@1224|Proteobacteria,2TR1H@28211|Alphaproteobacteria,3JSXM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid aminotransferase	ilvE	-	2.6.1.42	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00036,M00119,M00570	R01090,R01214,R02199,R10991	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_4
SX1_k127_1274385_7	1297865.APJD01000009_gene2818	1.734e-109	355.0	COG1846@1|root,COG1846@2|Bacteria,1RIX7@1224|Proteobacteria,2U94M@28211|Alphaproteobacteria,3JVPT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	petP	-	-	-	-	-	-	-	-	-	-	-	MarR_2
SX1_k127_1274385_5	1297865.APJD01000009_gene2819	2.02e-151	483.0	COG0745@1|root,COG0745@2|Bacteria,1MY3D@1224|Proteobacteria,2TSQF@28211|Alphaproteobacteria,3JSI0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	transcriptional regulator, winged helix family	petR	-	-	ko:K07659	ko02020,ko02026,map02020,map02026	M00445,M00742,M00743	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
SX1_k127_1274385_2	1297865.APJD01000009_gene2820	4.594e-294	904.0	COG0642@1|root,COG2205@2|Bacteria,1MUAK@1224|Proteobacteria,2TQRE@28211|Alphaproteobacteria,3JR9T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain	envZ	-	2.7.13.3	ko:K07638	ko02020,ko02026,map02020,map02026	M00445,M00742,M00743	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HAMP,HATPase_c,HisKA
SX1_k127_1274385_0	1297865.APJD01000009_gene2821	0.0	1471.0	COG4774@1|root,COG4774@2|Bacteria,1MV0X@1224|Proteobacteria,2TVX5@28211|Alphaproteobacteria,3K6QH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SX1_k127_1274385_8	1297865.APJD01000009_gene2822	1.356e-106	355.0	29V5H@1|root,30GJ5@2|Bacteria,1PHC8@1224|Proteobacteria,2TUP3@28211|Alphaproteobacteria,3JWIE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF3617
SX1_k127_1274385_13	1230476.C207_03531	2.383e-52	191.0	29A3V@1|root,2ZX51@2|Bacteria,1N1FQ@1224|Proteobacteria,2UDE2@28211|Alphaproteobacteria,3K04X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_05540	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1274385_10	1297865.APJD01000009_gene2824	2.603e-103	341.0	2CSH4@1|root,32SR7@2|Bacteria,1N366@1224|Proteobacteria,2UE8T@28211|Alphaproteobacteria,3JX2G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1274385_6	1230476.C207_03529	3.119e-142	452.0	COG3719@1|root,COG3719@2|Bacteria,1PTUN@1224|Proteobacteria,2TQUU@28211|Alphaproteobacteria,3JSX9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the RNase T2 family	rns	-	3.1.27.1,3.1.27.6	ko:K01166,ko:K01169	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Ribonuclease_T2
SX1_k127_1274385_4	1297865.APJD01000009_gene2826	7.64e-154	491.0	COG2961@1|root,COG2961@2|Bacteria,1MWGA@1224|Proteobacteria,2TU5K@28211|Alphaproteobacteria,3JUDU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Specifically methylates the adenine in position 2030 of 23S rRNA	rlmJ	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008988,GO:0009451,GO:0009987,GO:0010467,GO:0015976,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036307,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.266	ko:K07115	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	RsmJ
SX1_k127_128937_6	1297865.APJD01000010_gene5055	1.895e-56	200.0	29WMY@1|root,30I8S@2|Bacteria,1Q6UD@1224|Proteobacteria,2TX5W@28211|Alphaproteobacteria,3JUW5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_128937_7	316058.RPB_3500	5.815e-43	162.0	29ARX@1|root,2ZXRJ@2|Bacteria,1RFJ9@1224|Proteobacteria,2U8JG@28211|Alphaproteobacteria,3JYSX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_128937_1	1297865.APJD01000010_gene5056	1.69e-296	910.0	COG4249@1|root,COG4249@2|Bacteria,1R3WZ@1224|Proteobacteria,2TTKN@28211|Alphaproteobacteria,3JSCS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF4189,Peptidase_C14
SX1_k127_128937_2	1297865.APJD01000010_gene5057	1.961e-231	719.0	COG1064@1|root,COG1064@2|Bacteria,1MUTT@1224|Proteobacteria,2TTMV@28211|Alphaproteobacteria,3JSN5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	alcohol dehydrogenase	MA20_28180	-	1.1.1.1	ko:K00001,ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	-	R00623,R00754,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310	RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_zinc_N
SX1_k127_128937_4	1297865.APJD01000010_gene5058	2.059e-178	559.0	COG0030@1|root,COG0030@2|Bacteria,1MVNU@1224|Proteobacteria,2TRD9@28211|Alphaproteobacteria,3JS7D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits	ksgA	GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.182	ko:K02528	-	-	R10716	RC00003,RC03257	ko00000,ko01000,ko03009	-	-	-	RrnaAD
SX1_k127_128937_3	1297865.APJD01000010_gene5059	2.738e-202	631.0	COG1995@1|root,COG1995@2|Bacteria,1MX5W@1224|Proteobacteria,2TSKF@28211|Alphaproteobacteria,3JUN8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)	pdxA	-	1.1.1.262	ko:K00097	ko00750,ko01100,map00750,map01100	M00124	R05681,R05837,R07406	RC00089,RC00675,RC01475	ko00000,ko00001,ko00002,ko01000	-	-	-	PdxA
SX1_k127_128937_5	1297865.APJD01000010_gene5060	6.12e-178	560.0	COG0760@1|root,COG0760@2|Bacteria,1MVB3@1224|Proteobacteria,2TSJ3@28211|Alphaproteobacteria,3JRHX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	SurA N-terminal domain	surA	-	5.2.1.8	ko:K03771	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Rotamase,SurA_N,SurA_N_3
SX1_k127_128937_0	1297865.APJD01000010_gene5061	0.0	1646.0	COG1452@1|root,COG1452@2|Bacteria,1MUJC@1224|Proteobacteria,2TR3B@28211|Alphaproteobacteria,3JR89@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane	lptD	-	-	ko:K04744	-	-	-	-	ko00000,ko02000	1.B.42.1	-	-	OstA,OstA_C
SX1_k127_128937_8	1297865.APJD01000010_gene5062	7.28e-24	100.0	COG0795@1|root,COG0795@2|Bacteria,1MVW3@1224|Proteobacteria,2TR76@28211|Alphaproteobacteria,3JRHK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Permease	lptG	-	-	ko:K11720	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko02000	1.B.42.1	-	-	YjgP_YjgQ
SX1_k127_1293262_2	1297865.APJD01000036_gene1509	4.256e-128	409.0	COG5338@1|root,COG5338@2|Bacteria,1PFWT@1224|Proteobacteria,2U090@28211|Alphaproteobacteria,3JS4K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative beta-barrel porin 2	-	-	-	-	-	-	-	-	-	-	-	-	BBP2_2
SX1_k127_1293262_3	1297865.APJD01000036_gene1510	4.779e-55	194.0	COG4731@1|root,COG4731@2|Bacteria,1N29R@1224|Proteobacteria,2UDMV@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	DUF2147
SX1_k127_1293262_1	1297865.APJD01000036_gene1511	0.0	1013.0	COG0493@1|root,COG0493@2|Bacteria,1MU2H@1224|Proteobacteria,2TSE2@28211|Alphaproteobacteria,3JS73@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NADH NADPH, small subunit	gltD	-	1.4.1.13,1.4.1.14	ko:K00266	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	-	R00093,R00114,R00248	RC00006,RC00010,RC02799	ko00000,ko00001,ko01000	-	-	-	Fer4_20,Pyr_redox_2
SX1_k127_1293262_0	1297865.APJD01000036_gene1512	0.0	2521.0	COG0067@1|root,COG0069@1|root,COG0070@1|root,COG0067@2|Bacteria,COG0069@2|Bacteria,COG0070@2|Bacteria,1MU7B@1224|Proteobacteria,2TRHQ@28211|Alphaproteobacteria,3JSNT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glutamate synthase	gltB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.4.1.13,1.4.1.14	ko:K00265	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	-	R00093,R00114,R00248	RC00006,RC00010,RC02799	ko00000,ko00001,ko01000	-	-	-	GATase_2,GXGXG,Glu_syn_central,Glu_synthase
SX1_k127_1296095_4	1297865.APJD01000005_gene3527	2.133e-126	407.0	COG0601@1|root,COG0601@2|Bacteria,1MU8Z@1224|Proteobacteria,2TR3F@28211|Alphaproteobacteria,3JR08@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02033	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
SX1_k127_1296095_2	1297865.APJD01000005_gene3526	2.236e-193	618.0	COG1173@1|root,COG1173@2|Bacteria,1MUG0@1224|Proteobacteria,2TT4V@28211|Alphaproteobacteria,3JRP6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	N-terminal TM domain of oligopeptide transport permease C	-	-	-	ko:K02034	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1,OppC_N
SX1_k127_1296095_1	1297865.APJD01000005_gene3525	4.731e-204	655.0	COG0444@1|root,COG0444@2|Bacteria,1R4KB@1224|Proteobacteria,2TR0J@28211|Alphaproteobacteria,3JRIW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Oligopeptide/dipeptide transporter, C-terminal region	MA20_16740	-	-	ko:K02031	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
SX1_k127_1296095_0	1297865.APJD01000005_gene3524	9.343e-211	666.0	COG4608@1|root,COG4608@2|Bacteria,1NU4K@1224|Proteobacteria,2TQTV@28211|Alphaproteobacteria,3JT4D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the ABC transporter superfamily	MA20_16745	-	-	ko:K02032	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
SX1_k127_1296095_3	1297865.APJD01000005_gene3523	5.591e-184	576.0	COG0405@1|root,COG0405@2|Bacteria,1MUV6@1224|Proteobacteria,2TSME@28211|Alphaproteobacteria,3JQSX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Gamma-glutamyltranspeptidase	MA20_16750	-	2.3.2.2,3.4.19.13	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	-	R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935	RC00064,RC00090,RC00096	ko00000,ko00001,ko01000,ko01002	-	-	-	G_glu_transpept
SX1_k127_1301921_0	1297865.APJD01000021_gene3051	0.0	1912.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JRUW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	MA20_39335	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
SX1_k127_1301921_2	1297865.APJD01000021_gene3050	9.147e-192	599.0	COG0845@1|root,COG0845@2|Bacteria,1N202@1224|Proteobacteria,2VF1E@28211|Alphaproteobacteria,3JTNW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Barrel-sandwich domain of CusB or HlyD membrane-fusion	MA20_39340	-	-	-	-	-	-	-	-	-	-	-	HlyD_D23
SX1_k127_1301921_5	1297865.APJD01000021_gene3049	4.318e-129	418.0	COG2885@1|root,COG2885@2|Bacteria,1R6QU@1224|Proteobacteria,2TTMS@28211|Alphaproteobacteria,3JUPD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the ompA family	MA20_39345	-	-	-	-	-	-	-	-	-	-	-	OmpA
SX1_k127_1301921_1	1297865.APJD01000021_gene3048	2.445e-318	978.0	COG0457@1|root,COG4249@1|root,COG0457@2|Bacteria,COG4249@2|Bacteria,1MVIW@1224|Proteobacteria,2TV3Y@28211|Alphaproteobacteria,3JRI6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14,TPR_1,TPR_16,TPR_2,TPR_8
SX1_k127_1301921_4	1297865.APJD01000021_gene3047	5.741e-181	567.0	COG0491@1|root,COG0491@2|Bacteria,1MUT2@1224|Proteobacteria,2TRG9@28211|Alphaproteobacteria,3JU78@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metallo-beta-lactamase superfamily	MA20_39355	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
SX1_k127_1301921_3	1297865.APJD01000021_gene3046	1.527e-183	575.0	COG2084@1|root,COG2084@2|Bacteria,1MV48@1224|Proteobacteria,2U0FZ@28211|Alphaproteobacteria,3JW4R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase	-	-	1.1.1.31	ko:K00020	ko00280,ko01100,map00280,map01100	-	R05066	RC00099	ko00000,ko00001,ko01000	-	-	-	NAD_binding_11,NAD_binding_2
SX1_k127_1308934_1	172088.AUGA01000001_gene6628	6.522e-20	88.0	COG0346@1|root,COG0346@2|Bacteria,1RDNZ@1224|Proteobacteria,2U7TK@28211|Alphaproteobacteria,3JYP4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	MA20_22310	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
SX1_k127_1308934_0	1297865.APJD01000011_gene6690	3.872e-304	934.0	COG0534@1|root,COG0534@2|Bacteria,1MVRV@1224|Proteobacteria,2TSMQ@28211|Alphaproteobacteria,3JT42@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	MatE	-	-	-	-	-	-	-	-	-	-	-	-	MatE
SX1_k127_1323325_2	1297865.APJD01000005_gene3659	1.78e-123	395.0	COG0235@1|root,COG0235@2|Bacteria,1MWP9@1224|Proteobacteria,2TRMV@28211|Alphaproteobacteria,3JR8B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Class II Aldolase and Adducin N-terminal domain	addA	-	-	-	-	-	-	-	-	-	-	-	Aldolase_II
SX1_k127_1323325_1	1297865.APJD01000005_gene3660	1.88e-188	591.0	COG5495@1|root,COG5495@2|Bacteria,1RDUW@1224|Proteobacteria,2VGE0@28211|Alphaproteobacteria,3JWCT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF2520)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2520,Rossmann-like
SX1_k127_1323325_0	1297865.APJD01000005_gene3661	7.654e-258	795.0	COG0535@1|root,COG0535@2|Bacteria,1MXM1@1224|Proteobacteria,2TT7D@28211|Alphaproteobacteria,3JVYI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF3463)	MA20_16040	-	-	-	-	-	-	-	-	-	-	-	DUF3463,Fer4_12,Fer4_14,Radical_SAM
SX1_k127_1323325_3	1297865.APJD01000005_gene3662	6.873e-86	284.0	COG0761@1|root,COG0761@2|Bacteria,1MU7G@1224|Proteobacteria,2TRNR@28211|Alphaproteobacteria,3JS8Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IM	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis	ispH	-	1.17.7.4	ko:K03527	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05884,R08210	RC01137,RC01487	ko00000,ko00001,ko00002,ko01000	-	-	-	LYTB
SX1_k127_1327268_3	883078.HMPREF9695_03869	8.755e-97	317.0	COG3846@1|root,COG3846@2|Bacteria,1MVFD@1224|Proteobacteria,2TSHU@28211|Alphaproteobacteria,3JS5M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	PFAM TrbL VirB6 plasmid conjugal transfer protein	-	-	-	ko:K07344	ko02024,map02024	-	-	-	ko00000,ko00001,ko02044	3.A.7.4	-	-	TrbL
SX1_k127_1327268_5	1297865.APJD01000035_gene5432	2.429e-77	260.0	2CZAK@1|root,32T5X@2|Bacteria,1MZIQ@1224|Proteobacteria,2UBVN@28211|Alphaproteobacteria,3JYE7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1327268_2	883078.HMPREF9695_03871	9.943e-145	461.0	COG5314@1|root,COG5314@2|Bacteria,1MW5A@1224|Proteobacteria,2TSW2@28211|Alphaproteobacteria,3JRKE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	transfer protein trbJ	-	-	-	ko:K20266	ko02024,map02024	-	-	-	ko00000,ko00001,ko02044	3.A.7.4	-	-	-
SX1_k127_1327268_0	883078.HMPREF9695_03872	0.0	1647.0	COG3451@1|root,COG3451@2|Bacteria,1MXH0@1224|Proteobacteria,2TR1U@28211|Alphaproteobacteria,3JRFT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	component of type IV transporter system	-	-	-	ko:K20530	ko02024,map02024	-	-	-	ko00000,ko00001,ko02044	3.A.7.4	-	-	CagE_TrbE_VirB
SX1_k127_1327268_6	266835.14028212	1.699e-64	223.0	COG5268@1|root,COG5268@2|Bacteria,1MZ8D@1224|Proteobacteria,2UBWQ@28211|Alphaproteobacteria,43KA7@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	NU	Type IV secretory pathway, VirB3-like protein	-	-	-	ko:K20529	ko02024,map02024	-	-	-	ko00000,ko00001,ko02044	3.A.7.4	-	-	VirB3
SX1_k127_1327268_1	883078.HMPREF9695_03875	1.544e-196	615.0	COG4962@1|root,COG4962@2|Bacteria,1R7EN@1224|Proteobacteria,2TTUS@28211|Alphaproteobacteria,3JTN4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	TIGRFAM P-type conjugative transfer ATPase TrbB	trbB	-	-	ko:K20527	ko02024,map02024	-	-	-	ko00000,ko00001,ko02044	3.A.7.4	-	-	T2SSE
SX1_k127_1327268_9	1028801.RG1141_PA10510	5.42e-17	81.0	COG3967@1|root,COG3967@2|Bacteria,1QSYJ@1224|Proteobacteria,2U29W@28211|Alphaproteobacteria,4BM5E@82115|Rhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	ko:K14189	-	-	-	-	ko00000,ko01000	-	-	-	adh_short
SX1_k127_1342205_4	1230476.C207_01878	4.138e-201	628.0	COG1172@1|root,COG1172@2|Bacteria,1MX7D@1224|Proteobacteria,2TRYA@28211|Alphaproteobacteria,3JVTU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Branched-chain amino acid transport system / permease component	-	-	-	-	-	-	-	-	-	-	-	-	BPD_transp_2
SX1_k127_1342205_3	1297865.APJD01000005_gene3872	9.458e-224	698.0	COG1879@1|root,COG1879@2|Bacteria,1Q3KM@1224|Proteobacteria,2TVRK@28211|Alphaproteobacteria,3JUVC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Periplasmic binding protein domain	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_4
SX1_k127_1342205_0	1230476.C207_01880	0.0	1425.0	COG1172@1|root,COG3386@1|root,COG1172@2|Bacteria,COG3386@2|Bacteria,1MX7V@1224|Proteobacteria,2U1AZ@28211|Alphaproteobacteria,3JRP9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Strictosidine synthase	-	-	-	-	-	-	-	-	-	-	-	-	BPD_transp_2,SGL,Str_synth
SX1_k127_1342205_2	1297865.APJD01000005_gene3874	1.604e-247	773.0	COG3386@1|root,COG3386@2|Bacteria,1R64I@1224|Proteobacteria,2U1AR@28211|Alphaproteobacteria,3JWWS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	PFAM SMP-30 Gluconolaconase	-	-	-	-	-	-	-	-	-	-	-	-	SGL,Str_synth
SX1_k127_1342205_1	1297865.APJD01000005_gene3875	0.0	1005.0	COG1129@1|root,COG1129@2|Bacteria,1MU22@1224|Proteobacteria,2TQJV@28211|Alphaproteobacteria,3JQYV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	ABC transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran
SX1_k127_1342579_0	1297865.APJD01000009_gene2877	9.688e-199	620.0	COG0382@1|root,COG0382@2|Bacteria,1MV4Q@1224|Proteobacteria,2TT3I@28211|Alphaproteobacteria,3JSFB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate	ubiA	-	2.5.1.39	ko:K03179,ko:K06125	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00117,M00128	R05000,R05615,R05616,R07273	RC00209,RC02895	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	UbiA
SX1_k127_1342579_2	1297865.APJD01000009_gene2878	1.468e-147	470.0	28WB1@1|root,2ZIBH@2|Bacteria,1MXYB@1224|Proteobacteria,2U1VT@28211|Alphaproteobacteria,3JSP3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1342579_3	1297865.APJD01000009_gene2879	1.759e-93	308.0	28WB1@1|root,2ZIBH@2|Bacteria,1MXYB@1224|Proteobacteria,2U1VT@28211|Alphaproteobacteria,3JSP3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1342579_1	1297865.APJD01000009_gene2880	1.71e-166	524.0	COG1385@1|root,COG1385@2|Bacteria,1MXCU@1224|Proteobacteria,2TS0N@28211|Alphaproteobacteria,3JUEI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit	rsmE	-	2.1.1.193	ko:K09761	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltrans_RNA
SX1_k127_1343251_0	1297865.APJD01000004_gene5370	3.852e-316	970.0	COG0021@1|root,COG0021@2|Bacteria,1MUEY@1224|Proteobacteria,2TQUX@28211|Alphaproteobacteria,3JUC9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate	tktA	-	2.2.1.1	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01067,R01641,R01830,R06590	RC00032,RC00226,RC00571,RC01560	ko00000,ko00001,ko00002,ko01000	-	-	-	Transket_pyr,Transketolase_C,Transketolase_N
SX1_k127_1353174_0	1297865.APJD01000014_gene917	8.83e-221	689.0	COG0477@1|root,COG2814@2|Bacteria,1MWKH@1224|Proteobacteria,2U0GU@28211|Alphaproteobacteria,3JR5H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
SX1_k127_1353174_1	1230476.C207_00602	2.701e-149	473.0	COG2188@1|root,COG2188@2|Bacteria,1MUEB@1224|Proteobacteria,2TV81@28211|Alphaproteobacteria,3JTQE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	UTRA	-	-	-	ko:K03710	-	-	-	-	ko00000,ko03000	-	-	-	GntR,UTRA
SX1_k127_1353174_2	1297865.APJD01000014_gene919	2.071e-53	188.0	COG2114@1|root,COG2114@2|Bacteria,1MY09@1224|Proteobacteria,2U2KA@28211|Alphaproteobacteria,3JTVH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	CHASE3,Guanylate_cyc
SX1_k127_135561_6	1297865.APJD01000001_gene5914	8.953e-11	62.0	COG2128@1|root,COG2128@2|Bacteria,1RD1K@1224|Proteobacteria,2TU0H@28211|Alphaproteobacteria,3JUEJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	MA20_30475	-	-	-	-	-	-	-	-	-	-	-	CMD
SX1_k127_135561_3	1297865.APJD01000001_gene5915	3.253e-115	375.0	COG1846@1|root,COG1846@2|Bacteria,1RJ2M@1224|Proteobacteria,2U136@28211|Alphaproteobacteria,3JWAW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SX1_k127_135561_1	1230476.C207_01387	5.754e-266	824.0	COG2951@1|root,COG3409@1|root,COG2951@2|Bacteria,COG3409@2|Bacteria,1MUZ3@1224|Proteobacteria,2TRP0@28211|Alphaproteobacteria,3JTXK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Transglycosylase SLT domain	mltB	-	-	ko:K00786,ko:K08305	-	-	-	-	ko00000,ko01000,ko01011	-	GH103	-	PG_binding_1,SLT_2
SX1_k127_135561_2	1297865.APJD01000001_gene5917	2.611e-167	527.0	COG1028@1|root,COG1028@2|Bacteria,1MUPX@1224|Proteobacteria,2TT6C@28211|Alphaproteobacteria,3JS1C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	MA20_30510	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_135561_0	1297865.APJD01000001_gene5918	0.0	1203.0	COG0608@1|root,COG0608@2|Bacteria,1MU1M@1224|Proteobacteria,2TRZQ@28211|Alphaproteobacteria,3JRYX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DHH family	recJ	GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008297,GO:0008409,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0035312,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0045145,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360	-	ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DHH,DHHA1
SX1_k127_135561_5	1297865.APJD01000001_gene5920	8.128e-26	106.0	COG1011@1|root,COG1011@2|Bacteria,1MU1H@1224|Proteobacteria,2TQVC@28211|Alphaproteobacteria,3JS84@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Haloacid dehalogenase-like hydrolase	MA20_30570	-	3.8.1.2	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	-	R05287	RC00697	ko00000,ko00001,ko01000	-	-	-	HAD_2
SX1_k127_1357567_14	1230476.C207_01586	2.122e-55	199.0	COG0265@1|root,COG0265@2|Bacteria,1MU63@1224|Proteobacteria,2TS6B@28211|Alphaproteobacteria,3JRU8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the peptidase S1C family	htrA2	GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006508,GO:0006515,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0009987,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030163,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051603,GO:0061077,GO:0070011,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564,GO:1901565,GO:1901575	3.4.21.107	ko:K04771	ko01503,ko02020,map01503,map02020	M00728	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	-	-	-	PDZ_2,Trypsin_2
SX1_k127_1357567_1	1297865.APJD01000002_gene4117	0.0	1052.0	COG3746@1|root,COG3746@2|Bacteria,1RA39@1224|Proteobacteria,2U9KD@28211|Alphaproteobacteria,3JQYZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Phosphate-selective porin O and P	oprO	-	-	ko:K07221	-	-	-	-	ko00000,ko02000	1.B.5.1	-	-	Porin_O_P
SX1_k127_1357567_10	1297865.APJD01000002_gene4116	5.786e-77	258.0	COG1733@1|root,COG1733@2|Bacteria,1MZ6G@1224|Proteobacteria,2UCP4@28211|Alphaproteobacteria,3JYQ6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	HxlR-like helix-turn-helix	MA20_35425	-	-	-	-	-	-	-	-	-	-	-	HxlR
SX1_k127_1357567_5	1297865.APJD01000002_gene4115	2.931e-219	681.0	COG0604@1|root,COG0604@2|Bacteria,1MU4N@1224|Proteobacteria,2TRDI@28211|Alphaproteobacteria,3JUIN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily	MA20_35420	-	1.6.5.5	ko:K00344	-	-	-	-	ko00000,ko01000	-	-	-	ADH_N,ADH_zinc_N_2
SX1_k127_1357567_3	1297865.APJD01000002_gene4114	2.026e-243	753.0	COG3173@1|root,COG3173@2|Bacteria,1R7XK@1224|Proteobacteria,2TTWB@28211|Alphaproteobacteria,3JSZR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Ecdysteroid kinase	-	-	-	-	-	-	-	-	-	-	-	-	APH,EcKinase
SX1_k127_1357567_2	1297865.APJD01000002_gene4113	5.715e-261	804.0	2DB8I@1|root,2Z7RY@2|Bacteria,1MY4M@1224|Proteobacteria,2U2A8@28211|Alphaproteobacteria,3JTM4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1357567_13	1297865.APJD01000002_gene4112	5.499e-56	196.0	COG5470@1|root,COG5470@2|Bacteria,1PJI0@1224|Proteobacteria,2U9BT@28211|Alphaproteobacteria,3JZP8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF1330)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1330
SX1_k127_1357567_7	1297865.APJD01000002_gene4111	3.677e-158	503.0	COG1028@1|root,COG1028@2|Bacteria,1MUWC@1224|Proteobacteria,2TV32@28211|Alphaproteobacteria,3JRJH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Belongs to the short-chain dehydrogenases reductases (SDR) family	MA20_35415	-	-	-	-	-	-	-	-	-	-	-	adh_short,adh_short_C2
SX1_k127_1357567_0	1297865.APJD01000002_gene4110	0.0	1147.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,2TQR7@28211|Alphaproteobacteria,3JWY2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NT	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	HAMP,MCPsignal
SX1_k127_1357567_9	1297865.APJD01000002_gene4109	1.263e-80	269.0	COG0203@1|root,COG0203@2|Bacteria,1RCWN@1224|Proteobacteria,2U749@28211|Alphaproteobacteria,3JY6A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Ribosomal protein L17	rplQ	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02879	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L17
SX1_k127_1357567_4	398525.KB900701_gene5622	2.209e-221	687.0	COG0202@1|root,COG0202@2|Bacteria,1MU75@1224|Proteobacteria,2TSI0@28211|Alphaproteobacteria,3JS3G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	rpoA	GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576	2.7.7.6	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	RNA_pol_A_CTD,RNA_pol_A_bac,RNA_pol_L
SX1_k127_1357567_11	1038860.AXAP01000085_gene344	8.689e-72	244.0	COG0100@1|root,COG0100@2|Bacteria,1RD0A@1224|Proteobacteria,2U717@28211|Alphaproteobacteria,3JY0A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome	rpsK	GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02948	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S11
SX1_k127_1357567_12	398525.KB900701_gene5624	3.596e-71	241.0	COG0099@1|root,COG0099@2|Bacteria,1RD1G@1224|Proteobacteria,2U73D@28211|Alphaproteobacteria,3JYTS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits	rpsM	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02952	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S13
SX1_k127_1357567_6	1297865.APJD01000002_gene4105	4.599e-160	507.0	COG0563@1|root,COG0563@2|Bacteria,1MXCZ@1224|Proteobacteria,2TT6A@28211|Alphaproteobacteria,3JRQB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism	adk	-	2.7.4.3	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	M00049	R00127,R01547,R11319	RC00002	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ADK,ADK_lid
SX1_k127_1357567_8	1297865.APJD01000002_gene4104	2.786e-138	440.0	COG0201@1|root,COG0201@2|Bacteria,1MVU7@1224|Proteobacteria,2TQMT@28211|Alphaproteobacteria,3JST3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently	secY	-	-	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5	-	-	SecY
SX1_k127_1358705_4	1297865.APJD01000007_gene2220	8.747e-85	282.0	COG1846@1|root,COG1846@2|Bacteria,1RM6J@1224|Proteobacteria,2U5NG@28211|Alphaproteobacteria,3K6CW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SX1_k127_1358705_1	1297865.APJD01000007_gene2221	5.093e-152	482.0	COG1024@1|root,COG1024@2|Bacteria,1Q67Q@1224|Proteobacteria,2U2T5@28211|Alphaproteobacteria,3JRNJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	MA20_21535	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_1358705_0	1297865.APJD01000007_gene2222	1.362e-199	623.0	COG2017@1|root,COG2017@2|Bacteria,1MVR4@1224|Proteobacteria,2TZZR@28211|Alphaproteobacteria,3JUE5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Aldose 1-epimerase	-	-	-	-	-	-	-	-	-	-	-	-	Aldose_epim
SX1_k127_1358705_5	398525.KB900701_gene3363	9.376e-28	116.0	2AFVP@1|root,315YA@2|Bacteria,1NFRS@1224|Proteobacteria,2UH3A@28211|Alphaproteobacteria,3K19X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1358705_2	1230476.C207_03671	7.891e-136	437.0	COG1028@1|root,COG1028@2|Bacteria,1MVA5@1224|Proteobacteria,2U2EZ@28211|Alphaproteobacteria,3JWQS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	MA20_21425	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short,adh_short_C2
SX1_k127_1358705_3	1297865.APJD01000007_gene2225	2.271e-87	290.0	COG2164@1|root,COG2164@2|Bacteria,1RCY5@1224|Proteobacteria,2U5NN@28211|Alphaproteobacteria,3JY4J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3830)	MA20_34860	-	-	-	-	-	-	-	-	-	-	-	DUF3830
SX1_k127_1358705_6	1297865.APJD01000007_gene2226	0.000392	44.0	COG0726@1|root,COG0726@2|Bacteria,1MV3V@1224|Proteobacteria,2TR0I@28211|Alphaproteobacteria,3JQQA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Polysaccharide deacetylase	MA20_34855	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
SX1_k127_1360043_2	1297865.APJD01000014_gene527	4.04e-271	834.0	COG0441@1|root,COG0441@2|Bacteria,1PRED@1224|Proteobacteria,2TUGY@28211|Alphaproteobacteria,3JT99@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Anticodon binding domain	-	-	6.1.1.3	ko:K01868	ko00970,map00970	M00359,M00360	R03663	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,tRNA-synt_2b
SX1_k127_1360043_9	1230476.C207_06493	4.512e-68	235.0	COG1475@1|root,COG1475@2|Bacteria,1N7YF@1224|Proteobacteria,2UG2T@28211|Alphaproteobacteria,3JXA2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	ParB-like nuclease domain	-	-	-	-	-	-	-	-	-	-	-	-	ParBc
SX1_k127_1360043_10	1297865.APJD01000014_gene526	9.355e-28	112.0	2BSBX@1|root,32MDS@2|Bacteria,1NBB2@1224|Proteobacteria,2UH9U@28211|Alphaproteobacteria,3K12K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1360043_7	1297865.APJD01000014_gene525	3.316e-138	440.0	2C8PG@1|root,2ZBJC@2|Bacteria,1R3DD@1224|Proteobacteria,2U326@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1360043_0	1297865.APJD01000014_gene524	8.106e-307	942.0	COG0277@1|root,COG0277@2|Bacteria,1MV1Q@1224|Proteobacteria,2TT4Z@28211|Alphaproteobacteria,3JTJM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	FAD binding domain	-	-	-	-	-	-	-	-	-	-	-	-	ALO,FAD_binding_4
SX1_k127_1360043_8	1297865.APJD01000014_gene523	2.032e-74	258.0	2CXSR@1|root,32T2I@2|Bacteria,1MZUX@1224|Proteobacteria,2U6EW@28211|Alphaproteobacteria,3JYIB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4383
SX1_k127_1360043_4	1297865.APJD01000014_gene522	6.036e-237	735.0	28MT5@1|root,2ZB1G@2|Bacteria,1RC18@1224|Proteobacteria,2U40K@28211|Alphaproteobacteria,3JUHA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1360043_6	1297865.APJD01000014_gene520	1.833e-216	677.0	COG0596@1|root,COG0596@2|Bacteria,1NU1Q@1224|Proteobacteria,2U3QC@28211|Alphaproteobacteria,3JW5F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6,Biotin_lipoyl
SX1_k127_1360043_3	1297865.APJD01000014_gene519	1.951e-256	797.0	COG0477@1|root,COG0477@2|Bacteria,1QWJ8@1224|Proteobacteria,2TWZ2@28211|Alphaproteobacteria,3K6PY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Transmembrane secretion effector	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_1360043_1	1297865.APJD01000014_gene518	6.775e-296	910.0	COG4191@1|root,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2U3TT@28211|Alphaproteobacteria,3JWGC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c
SX1_k127_1360043_5	1297865.APJD01000014_gene517	2.696e-225	698.0	COG0243@1|root,COG0243@2|Bacteria,1MU6B@1224|Proteobacteria,2TTUX@28211|Alphaproteobacteria,3JUJ5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family	-	-	-	-	-	-	-	-	-	-	-	-	Molybdopterin,Molydop_binding
SX1_k127_138674_0	1297865.APJD01000005_gene3490	2.18e-211	658.0	COG1638@1|root,COG1638@2|Bacteria,1P6X1@1224|Proteobacteria,2TRTU@28211|Alphaproteobacteria,3JTDG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Bacterial extracellular solute-binding protein, family 7	-	-	-	-	-	-	-	-	-	-	-	-	DctP
SX1_k127_138674_1	1297865.APJD01000005_gene3491	1.589e-86	287.0	COG3090@1|root,COG3090@2|Bacteria,1PR3S@1224|Proteobacteria,2U0AG@28211|Alphaproteobacteria,3JVM2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Tripartite ATP-independent periplasmic transporters, DctQ component	-	-	-	-	-	-	-	-	-	-	-	-	DctQ
SX1_k127_1392888_1	1297865.APJD01000018_gene5726	3.588e-307	942.0	COG4529@1|root,COG4529@2|Bacteria,1MU3U@1224|Proteobacteria,2TUBM@28211|Alphaproteobacteria,3JUXD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	FAD-NAD(P)-binding	-	-	3.1.2.6	ko:K01069	ko00620,map00620	-	R01736	RC00004,RC00137	ko00000,ko00001,ko01000	-	-	-	NAD_binding_9
SX1_k127_1392888_3	1297865.APJD01000018_gene5727	3.322e-89	295.0	COG1846@1|root,COG1846@2|Bacteria,1REH3@1224|Proteobacteria,2VEQ4@28211|Alphaproteobacteria,3K3PF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	IclR helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	MarR
SX1_k127_1392888_5	1463861.JNXE01000003_gene3779	4.096e-27	115.0	COG1075@1|root,COG1075@2|Bacteria,2I2U3@201174|Actinobacteria	201174|Actinobacteria	S	Alpha beta hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
SX1_k127_1392888_4	1230476.C207_00142	5.369e-85	284.0	COG2267@1|root,COG2267@2|Bacteria,1QU4T@1224|Proteobacteria,2TTC1@28211|Alphaproteobacteria,3K70Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
SX1_k127_1392888_2	1297865.APJD01000018_gene5730	4.047e-132	422.0	COG1309@1|root,COG1309@2|Bacteria,1QYD4@1224|Proteobacteria,2TVBJ@28211|Alphaproteobacteria,3JRBQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	ko:K09017	-	-	-	-	ko00000,ko03000	-	-	-	TetR_N
SX1_k127_1392888_0	1297865.APJD01000018_gene5731	0.0	1377.0	COG1012@1|root,COG2030@1|root,COG1012@2|Bacteria,COG2030@2|Bacteria,1MWD4@1224|Proteobacteria,2TUPI@28211|Alphaproteobacteria,3JTGP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CI	MaoC like domain	paaN	-	1.2.1.91,3.3.2.12	ko:K02618	ko00360,ko01120,map00360,map01120	-	R09820,R09836	RC00080,RC02667	ko00000,ko00001,ko01000	-	-	-	Aldedh,MaoC_dehydratas
SX1_k127_1394807_1	1297865.APJD01000003_gene6205	0.0	1270.0	COG0706@1|root,COG0706@2|Bacteria,1MV5M@1224|Proteobacteria,2TSTJ@28211|Alphaproteobacteria,3JQU3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins	yidC	GO:0002790,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032940,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944	-	ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044,ko03029	2.A.9	-	-	60KD_IMP,YidC_periplas
SX1_k127_1394807_4	1297865.APJD01000003_gene6206	4.314e-79	269.0	COG0594@1|root,COG0594@2|Bacteria,1N6QY@1224|Proteobacteria,2UFAB@28211|Alphaproteobacteria,3JZJS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme	rnpA	-	3.1.26.5	ko:K03536	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Ribonuclease_P
SX1_k127_1394807_6	323098.Nwi_3076	2.326e-19	90.0	COG0230@1|root,COG0230@2|Bacteria,1NGGS@1224|Proteobacteria,2UJCE@28211|Alphaproteobacteria,3K10Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the bacterial ribosomal protein bL34 family	rpmH	-	-	ko:K02914	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L34
SX1_k127_1394807_2	1297865.APJD01000003_gene6207	1.675e-304	936.0	COG4191@1|root,COG4191@2|Bacteria,1MVK7@1224|Proteobacteria,2TR44@28211|Alphaproteobacteria,3JU63@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	His Kinase A (phosphoacceptor) domain	regM	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
SX1_k127_1394807_7	1087481.AGFX01000013_gene3067	0.0001368	47.0	2BKI8@1|root,32EZF@2|Bacteria,1TZNM@1239|Firmicutes,4I8XU@91061|Bacilli,270PJ@186822|Paenibacillaceae	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1394807_0	1230476.C207_05226	0.0	1384.0	COG1032@1|root,COG1032@2|Bacteria,1MUG3@1224|Proteobacteria,2TU6C@28211|Alphaproteobacteria,3JTYI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	UPF0313 protein	MA20_21630	-	-	-	-	-	-	-	-	-	-	-	DUF3362,Radical_SAM,Radical_SAM_N
SX1_k127_1394807_3	1297865.APJD01000003_gene6209	3.19e-93	310.0	2EQEJ@1|root,33I0I@2|Bacteria,1RG33@1224|Proteobacteria,2U867@28211|Alphaproteobacteria,3JZ8S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1394807_5	1230476.C207_05217	3.34e-54	191.0	2E29A@1|root,2ZAG3@2|Bacteria,1R6I1@1224|Proteobacteria,2U3VU@28211|Alphaproteobacteria,3JVEZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_9
SX1_k127_1418940_0	1297865.APJD01000002_gene4056	1.166e-159	503.0	COG0697@1|root,COG0697@2|Bacteria,1MY2U@1224|Proteobacteria,2TV71@28211|Alphaproteobacteria,3JW25@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_1418940_2	1116472.MGMO_54c00260	1.439e-33	136.0	COG2732@1|root,COG2732@2|Bacteria,1Q0HT@1224|Proteobacteria,1TIBC@1236|Gammaproteobacteria,1XGWY@135618|Methylococcales	135618|Methylococcales	K	Barstar (barnase inhibitor)	-	-	-	-	-	-	-	-	-	-	-	-	Barstar
SX1_k127_1418940_1	1297865.APJD01000002_gene4057	1.058e-48	173.0	COG0654@1|root,COG0654@2|Bacteria,1R7KI@1224|Proteobacteria,2TV6E@28211|Alphaproteobacteria,3JTN0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	FAD binding domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3
SX1_k127_1419558_4	1297865.APJD01000023_gene1118	6.208e-130	418.0	COG1173@1|root,COG1173@2|Bacteria,1MU26@1224|Proteobacteria,2TTEV@28211|Alphaproteobacteria,3JSKA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	N-terminal TM domain of oligopeptide transport permease C	MA20_20685	-	-	ko:K02034	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1,OppC_N
SX1_k127_1419558_3	1297865.APJD01000023_gene1117	3.491e-194	607.0	COG0601@1|root,COG0601@2|Bacteria,1MU8Z@1224|Proteobacteria,2TSF3@28211|Alphaproteobacteria,3JQWP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Binding-protein-dependent transport system inner membrane component	appB	-	-	ko:K02033	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
SX1_k127_1419558_0	1230476.C207_05369	0.0	1239.0	COG0747@1|root,COG0747@2|Bacteria,1MUP8@1224|Proteobacteria,2TQXX@28211|Alphaproteobacteria,3JT8W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Bacterial extracellular solute-binding proteins, family 5 Middle	appA	-	-	ko:K02035	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	SBP_bac_5
SX1_k127_1419558_1	1297865.APJD01000023_gene1115	3.617e-314	962.0	COG1473@1|root,COG1473@2|Bacteria,1MX6N@1224|Proteobacteria,2TRSE@28211|Alphaproteobacteria,3JRMS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Peptidase family M20/M25/M40	MA20_20700	-	-	ko:K12941	-	-	-	-	ko00000,ko01002	-	-	-	M20_dimer,Peptidase_M20
SX1_k127_1419558_2	1297865.APJD01000023_gene1114	4.564e-302	926.0	COG1409@1|root,COG1409@2|Bacteria,1PNXB@1224|Proteobacteria,2U4JF@28211|Alphaproteobacteria,3JUZR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Calcineurin-like phosphoesterase	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos
SX1_k127_1419558_5	1297865.APJD01000023_gene1113	2.824e-40	150.0	2AEEH@1|root,32541@2|Bacteria,1NEPR@1224|Proteobacteria,2UG6P@28211|Alphaproteobacteria,3K172@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1419558_6	1297865.APJD01000023_gene1112	4.533e-28	113.0	COG2197@1|root,COG2197@2|Bacteria,1QW7K@1224|Proteobacteria,2U79M@28211|Alphaproteobacteria,3JYQM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE
SX1_k127_1421005_2	1297865.APJD01000005_gene3521	3.401e-128	420.0	COG0444@1|root,COG0444@2|Bacteria,1R4KB@1224|Proteobacteria,2TR0J@28211|Alphaproteobacteria,3JSG0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Belongs to the ABC transporter superfamily	MA20_16760	-	-	ko:K02031	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
SX1_k127_1421005_1	1297865.APJD01000005_gene3522	6.528e-149	473.0	COG3342@1|root,COG3342@2|Bacteria,1MWQT@1224|Proteobacteria,2TRJZ@28211|Alphaproteobacteria,3JU3P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Family of unknown function (DUF1028)	MA20_16755	-	-	-	-	-	-	-	-	-	-	-	DUF1028
SX1_k127_1421005_0	1297865.APJD01000005_gene3523	2.288e-229	709.0	COG0405@1|root,COG0405@2|Bacteria,1MUV6@1224|Proteobacteria,2TSME@28211|Alphaproteobacteria,3JQSX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Gamma-glutamyltranspeptidase	MA20_16750	-	2.3.2.2,3.4.19.13	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	-	R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935	RC00064,RC00090,RC00096	ko00000,ko00001,ko01000,ko01002	-	-	-	G_glu_transpept
SX1_k127_1421221_5	1297865.APJD01000011_gene6846	7.214e-103	335.0	COG0697@1|root,COG0697@2|Bacteria,1R51G@1224|Proteobacteria,2U2JQ@28211|Alphaproteobacteria,3JT6N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_1421221_3	1297865.APJD01000011_gene6845	4.792e-148	468.0	COG1305@1|root,COG1305@2|Bacteria,1R9XR@1224|Proteobacteria,2U6C1@28211|Alphaproteobacteria,3JXU0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Transglutaminase-like superfamily	MA20_22505	-	-	-	-	-	-	-	-	-	-	-	Transglut_core
SX1_k127_1421221_7	1297865.APJD01000011_gene6844	5.929e-39	146.0	29ZK8@1|root,314NI@2|Bacteria,1N47A@1224|Proteobacteria,2UCGV@28211|Alphaproteobacteria,3K0EF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1421221_8	172088.AUGA01000001_gene6466	6.439e-25	107.0	2AH3D@1|root,317CT@2|Bacteria,1NJJR@1224|Proteobacteria,2UMH1@28211|Alphaproteobacteria,3K1SM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1421221_10	1298867.AUES01000028_gene2599	1.344e-10	63.0	2BICD@1|root,32CIG@2|Bacteria,1NMAS@1224|Proteobacteria,2UMS4@28211|Alphaproteobacteria,3K1Z5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1421221_6	1297865.APJD01000011_gene6842	1.627e-44	162.0	2EIKT@1|root,33CC3@2|Bacteria,1N2RM@1224|Proteobacteria,2UD5M@28211|Alphaproteobacteria,3K02V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1421221_9	398525.KB900701_gene2334	5.556e-18	96.0	COG0697@1|root,COG0697@2|Bacteria	2|Bacteria	EG	spore germination	-	-	-	-	-	-	-	-	-	-	-	-	EamA,HAMP,SpoIIE,dCache_1
SX1_k127_1421221_2	1297865.APJD01000011_gene6840	3.215e-186	583.0	COG0697@1|root,COG0697@2|Bacteria,1NEYM@1224|Proteobacteria,2TUZT@28211|Alphaproteobacteria,3JXGF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	MA20_20630	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_1421221_4	1297865.APJD01000011_gene6839	3.884e-145	461.0	COG1309@1|root,COG1309@2|Bacteria,1Q1V3@1224|Proteobacteria,2V9GT@28211|Alphaproteobacteria,3JQWU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	WHG domain	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N,WHG
SX1_k127_1421221_1	1297865.APJD01000011_gene6838	8.902e-264	812.0	COG2124@1|root,COG2124@2|Bacteria,1MY2E@1224|Proteobacteria,2TTFN@28211|Alphaproteobacteria,3JRSU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Cytochrome P450	-	-	-	-	-	-	-	-	-	-	-	-	p450
SX1_k127_1421221_0	1297865.APJD01000011_gene6837	0.0	1028.0	COG0745@1|root,COG2203@1|root,COG4191@1|root,COG5002@1|root,COG0745@2|Bacteria,COG2203@2|Bacteria,COG4191@2|Bacteria,COG5002@2|Bacteria,1RCM9@1224|Proteobacteria,2TQQ9@28211|Alphaproteobacteria,3JR0R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Response regulator receiver	-	-	-	-	-	-	-	-	-	-	-	-	CHASE3,GAF_2,HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9,Response_reg
SX1_k127_1423072_2	1297865.APJD01000014_gene438	3.051e-93	310.0	COG0730@1|root,COG0730@2|Bacteria,1R712@1224|Proteobacteria,2U3AA@28211|Alphaproteobacteria,3JWHI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	membrane transporter protein	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
SX1_k127_1423072_1	1297865.APJD01000014_gene437	1.85e-147	468.0	COG1917@1|root,COG2207@1|root,COG1917@2|Bacteria,COG2207@2|Bacteria,1R644@1224|Proteobacteria,2U2C3@28211|Alphaproteobacteria,3JRWS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,Cupin_2,HTH_18
SX1_k127_1423072_0	1297865.APJD01000014_gene436	2.458e-235	729.0	COG0477@1|root,COG2814@2|Bacteria,1MVHG@1224|Proteobacteria,2TWR2@28211|Alphaproteobacteria,3JVDD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_1436243_13	1297865.APJD01000010_gene5117	1.191e-76	259.0	COG2050@1|root,COG2050@2|Bacteria,1PP3J@1224|Proteobacteria,2U5E4@28211|Alphaproteobacteria,3JY0G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Thioesterase superfamily	MA20_28520	-	-	-	-	-	-	-	-	-	-	-	4HBT
SX1_k127_1436243_9	1297865.APJD01000010_gene5118	1.679e-131	420.0	COG1247@1|root,COG1247@2|Bacteria,1N0PB@1224|Proteobacteria,2UC2G@28211|Alphaproteobacteria,3JST0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Acetyltransferase (GNAT) family	MA20_28525	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
SX1_k127_1436243_16	1297865.APJD01000010_gene5119	4.596e-57	201.0	2DIWC@1|root,32UBW@2|Bacteria,1RKUE@1224|Proteobacteria,2U9ET@28211|Alphaproteobacteria,3JZ9C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_28530	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1436243_15	1297865.APJD01000010_gene5120	6.704e-58	202.0	COG1359@1|root,COG1359@2|Bacteria,1N5CD@1224|Proteobacteria,2UB7Q@28211|Alphaproteobacteria,3JZV8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Antibiotic biosynthesis monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	ABM
SX1_k127_1436243_6	1297865.APJD01000010_gene5121	4.364e-143	456.0	COG5482@1|root,COG5482@2|Bacteria,1MWIN@1224|Proteobacteria,2TS4R@28211|Alphaproteobacteria,3JQR1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative PD-(D/E)XK phosphodiesterase (DUF2161)	MA20_28540	-	-	-	-	-	-	-	-	-	-	-	DUF2161
SX1_k127_1436243_14	1297865.APJD01000010_gene5122	2.88e-65	225.0	2A59E@1|root,30XB5@2|Bacteria,1RFYY@1224|Proteobacteria,2U87X@28211|Alphaproteobacteria,3JZ3E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	GrlR
SX1_k127_1436243_7	1297865.APJD01000010_gene5123	2.08e-132	424.0	COG1028@1|root,COG1028@2|Bacteria,1N8G3@1224|Proteobacteria,2TUTY@28211|Alphaproteobacteria,3JSK3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short,adh_short_C2
SX1_k127_1436243_12	1297865.APJD01000010_gene5124	4.883e-109	358.0	COG2755@1|root,COG2755@2|Bacteria,1RCAC@1224|Proteobacteria,2U0SR@28211|Alphaproteobacteria,3JVDT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	lipolytic protein G-D-S-L family	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
SX1_k127_1436243_19	1230476.C207_05342	2.667e-34	132.0	29E9N@1|root,3017Q@2|Bacteria,1N6GN@1224|Proteobacteria,2UD18@28211|Alphaproteobacteria,3K0S8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1436243_3	1297865.APJD01000010_gene5126	2.938e-159	503.0	COG2365@1|root,COG2365@2|Bacteria,1R4XF@1224|Proteobacteria,2U0KA@28211|Alphaproteobacteria,3JUJ7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Tyrosine phosphatase family	-	-	3.1.3.48	ko:K01104	-	-	-	-	ko00000,ko01000	-	-	-	Y_phosphatase3
SX1_k127_1436243_17	1297865.APJD01000010_gene5127	1.759e-49	177.0	2A9G9@1|root,30YN0@2|Bacteria,1RJ0U@1224|Proteobacteria,2UBC1@28211|Alphaproteobacteria,3JZT3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Membrane-bound lysozyme-inhibitor of c-type lysozyme	-	-	-	-	-	-	-	-	-	-	-	-	MliC
SX1_k127_1436243_18	1297865.APJD01000010_gene5128	6.838e-37	140.0	28S0E@1|root,2ZECA@2|Bacteria,1N1GX@1224|Proteobacteria,2UDK6@28211|Alphaproteobacteria,3K06T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2735)	MA20_28560	-	-	-	-	-	-	-	-	-	-	-	DUF2735
SX1_k127_1436243_2	1297865.APJD01000010_gene5129	5.671e-240	742.0	COG0174@1|root,COG0174@2|Bacteria,1NZU7@1224|Proteobacteria,2TS0B@28211|Alphaproteobacteria,3JR58@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glutamine synthetase, catalytic domain	glnII	-	6.3.1.2	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	-	R00253	RC00010,RC02798	ko00000,ko00001,ko01000,ko04147	-	-	-	Gln-synt_C,Gln-synt_N
SX1_k127_1436243_5	1297865.APJD01000010_gene5130	4.563e-149	472.0	2A59E@1|root,30TYK@2|Bacteria,1NBM6@1224|Proteobacteria,2TR3Y@28211|Alphaproteobacteria,3JTE7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_28575	-	-	-	-	-	-	-	-	-	-	-	GrlR
SX1_k127_1436243_8	1297865.APJD01000010_gene5131	2.699e-132	425.0	COG0725@1|root,COG0725@2|Bacteria,1PTVK@1224|Proteobacteria,2TU4Y@28211|Alphaproteobacteria,3JQYR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Bacterial extracellular solute-binding protein	-	-	5.3.3.7	ko:K22003	ko00660,map00660	-	R02244	RC00668	ko00000,ko00001,ko01000	-	-	-	SBP_bac_11
SX1_k127_1436243_4	1297865.APJD01000010_gene5132	8.458e-151	480.0	COG0790@1|root,COG0790@2|Bacteria,1P3BA@1224|Proteobacteria,2TTYD@28211|Alphaproteobacteria,3JR2Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sel1-like repeats.	-	-	-	-	-	-	-	-	-	-	-	-	Sel1,TPR_6
SX1_k127_1436243_20	1297865.APJD01000010_gene5133	1.84e-18	98.0	2E328@1|root,32Y2G@2|Bacteria,1N9RI@1224|Proteobacteria,2UFJ4@28211|Alphaproteobacteria,3K0VA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1436243_10	1297865.APJD01000010_gene5134	1.282e-130	418.0	29NNR@1|root,309KP@2|Bacteria,1R91H@1224|Proteobacteria,2TUSZ@28211|Alphaproteobacteria,3JRRV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1436243_11	1297865.APJD01000010_gene5135	2.896e-113	368.0	COG2080@1|root,COG2080@2|Bacteria,1N9CA@1224|Proteobacteria,2U13W@28211|Alphaproteobacteria,3JUYD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	[2Fe-2S] binding domain	-	-	-	-	-	-	-	-	-	-	-	-	DHODB_Fe-S_bind,Fer2,Fer2_2
SX1_k127_1436243_0	1297865.APJD01000010_gene5136	0.0	1875.0	COG1529@1|root,COG1529@2|Bacteria,1MUEA@1224|Proteobacteria,2U1IN@28211|Alphaproteobacteria,3JWCS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Molybdopterin-binding domain of aldehyde dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Ald_Xan_dh_C2
SX1_k127_1436243_1	1297865.APJD01000010_gene5137	7.465e-249	771.0	2CFSM@1|root,2ZJVI@2|Bacteria,1PR43@1224|Proteobacteria,2TSI1@28211|Alphaproteobacteria,3JX8R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1443030_3	1297865.APJD01000018_gene5693	7.877e-51	184.0	COG0810@1|root,COG4774@1|root,COG0810@2|Bacteria,COG4774@2|Bacteria,1N8AU@1224|Proteobacteria	1224|Proteobacteria	P	Secretin and TonB N terminus short domain	-	-	-	-	-	-	-	-	-	-	-	-	STN
SX1_k127_1443030_2	1297865.APJD01000018_gene5692	2.254e-63	219.0	2EPTB@1|root,33HDV@2|Bacteria,1N08E@1224|Proteobacteria,2UC66@28211|Alphaproteobacteria,3K0I8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1443030_1	1297865.APJD01000018_gene5691	1.625e-136	438.0	COG0500@1|root,COG2226@2|Bacteria,1MVIS@1224|Proteobacteria,2TV8R@28211|Alphaproteobacteria,3JR6F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	ubiE/COQ5 methyltransferase family	pmtA	-	2.1.1.17,2.1.1.71	ko:K00570	ko00564,ko01100,ko01110,map00564,map01100,map01110	M00091	R01320,R02056,R03424	RC00003,RC00060,RC00181,RC00496	ko00000,ko00001,ko00002,ko01000	-	-	-	Methyltransf_11
SX1_k127_1443030_0	1297865.APJD01000018_gene5690	1.583e-261	806.0	COG0482@1|root,COG0482@2|Bacteria,1MUT1@1224|Proteobacteria,2TQU7@28211|Alphaproteobacteria,3JQMX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34	mnmA	-	2.8.1.13	ko:K00566	ko04122,map04122	-	R08700	RC02313,RC02315	ko00000,ko00001,ko01000,ko03016	-	-	-	tRNA_Me_trans
SX1_k127_145641_0	1297865.APJD01000003_gene6320	0.0	1122.0	COG0258@1|root,COG0749@1|root,COG0258@2|Bacteria,COG0749@2|Bacteria,1MU31@1224|Proteobacteria,2TRJF@28211|Alphaproteobacteria,3JRVT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	polA	GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576	2.7.7.7	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	-	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	5_3_exonuc,5_3_exonuc_N,DNA_pol_A,DNA_pol_A_exo1
SX1_k127_145641_3	1230476.C207_04688	0.0006972	44.0	COG0621@1|root,COG0621@2|Bacteria,1MUCS@1224|Proteobacteria,2TRYD@28211|Alphaproteobacteria,3JTP7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	MiaB-like tRNA modifying enzyme	mtaB	GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035598,GO:0035600,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050497,GO:0071704,GO:0090304,GO:1901360	2.8.4.5	ko:K18707	-	-	R10649	RC00003,RC03221	ko00000,ko01000,ko03016	-	-	-	Radical_SAM,UPF0004
SX1_k127_145641_1	1297865.APJD01000003_gene6319	1.669e-121	391.0	COG1280@1|root,COG1280@2|Bacteria,1MWA1@1224|Proteobacteria,2TVFG@28211|Alphaproteobacteria,3JS2P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	LysE type translocator	MA20_22020	-	-	-	-	-	-	-	-	-	-	-	LysE
SX1_k127_145641_2	1297865.APJD01000003_gene6318	6.011e-32	124.0	COG0625@1|root,COG0625@2|Bacteria,1MUN3@1224|Proteobacteria,2TTVR@28211|Alphaproteobacteria,3JV74@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, C-terminal domain	MA20_22025	-	-	ko:K11209	-	-	-	-	ko00000,ko01000	-	-	-	GST_C,GST_C_2,GST_N,GST_N_3
SX1_k127_1471643_4	1297865.APJD01000010_gene4914	8.223e-206	643.0	COG0385@1|root,COG0385@2|Bacteria,1MUMM@1224|Proteobacteria,2TU7J@28211|Alphaproteobacteria,3JW66@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SBF-like CPA transporter family (DUF4137)	yfeH	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K14347	-	-	-	-	ko00000,ko02000,ko04147	2.A.93.1	-	-	SBF_like
SX1_k127_1471643_5	1297865.APJD01000010_gene4913	2.425e-178	560.0	COG0583@1|root,COG0583@2|Bacteria,1R4NT@1224|Proteobacteria,2U1ZF@28211|Alphaproteobacteria,3JX1B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_1471643_1	1297865.APJD01000010_gene4912	3.489e-225	698.0	COG5485@1|root,COG5485@2|Bacteria,1MXSP@1224|Proteobacteria,2TVPC@28211|Alphaproteobacteria,3JRUM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Haem-containing dehydratase	-	-	4.99.1.5	ko:K13028	-	-	R02827	RC00791	ko00000,ko01000	-	-	-	Dehydratase_hem
SX1_k127_1471643_0	1297865.APJD01000010_gene4911	4.251e-228	707.0	COG0388@1|root,COG0388@2|Bacteria,1MWQG@1224|Proteobacteria,2TYHX@28211|Alphaproteobacteria,3JTNQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Carbon-nitrogen hydrolase	MA20_36155	-	3.5.5.7	ko:K01502	ko00643,ko01120,map00643,map01120	-	R05358	RC01336	ko00000,ko00001,ko01000	-	-	-	CN_hydrolase
SX1_k127_1471643_3	1297865.APJD01000010_gene4910	1.946e-208	648.0	COG2207@1|root,COG2207@2|Bacteria,1MXT9@1224|Proteobacteria,2U0UP@28211|Alphaproteobacteria,3JRK9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	AraC-binding-like domain	MA20_36150	-	-	-	-	-	-	-	-	-	-	-	AraC_binding_2,HTH_18
SX1_k127_1471643_6	1297865.APJD01000010_gene4909	1.665e-67	230.0	2BHHJ@1|root,32BJW@2|Bacteria,1REMD@1224|Proteobacteria,2U7XZ@28211|Alphaproteobacteria,3JYPI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PilZ domain	-	-	-	-	-	-	-	-	-	-	-	-	PilZ
SX1_k127_1471643_2	1297865.APJD01000010_gene4908	7.126e-219	680.0	COG0477@1|root,COG0477@2|Bacteria,1MWUR@1224|Proteobacteria,2TT7N@28211|Alphaproteobacteria,3JQZB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	-	-	-	ko:K08169	-	-	-	-	ko00000,ko02000	2.A.1.3.17	-	-	MFS_1
SX1_k127_1474378_0	1297865.APJD01000007_gene2175	0.0	2715.0	COG1020@1|root,COG1020@2|Bacteria,1QK4F@1224|Proteobacteria,2TRUN@28211|Alphaproteobacteria,3JQV9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Phosphopantetheine attachment site	-	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C,Condensation,Nitroreductase,PP-binding,Thioesterase
SX1_k127_1476678_5	1297865.APJD01000014_gene510	5.922e-141	451.0	COG0583@1|root,COG0583@2|Bacteria,1MWVB@1224|Proteobacteria,2TQXV@28211|Alphaproteobacteria,3JSNI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR family	MA20_27415	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_1476678_1	1297865.APJD01000014_gene509	0.0	1009.0	COG1012@1|root,COG1012@2|Bacteria,1MUHV@1224|Proteobacteria,2TSMD@28211|Alphaproteobacteria,3JVCG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Acyl-CoA reductase (LuxC)	mmsA	GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006950,GO:0006979,GO:0008150,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050896	1.2.1.18,1.2.1.27	ko:K00140	ko00280,ko00410,ko00562,ko00640,ko01100,ko01200,map00280,map00410,map00562,map00640,map01100,map01200	M00013	R00705,R00706,R00922,R00935	RC00004,RC02723,RC02817	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
SX1_k127_1476678_8	743836.AYNA01000035_gene705	1.476e-05	48.0	COG0270@1|root,COG0270@2|Bacteria,1MV9H@1224|Proteobacteria,2TTZG@28211|Alphaproteobacteria,36XGS@31993|Methylocystaceae	28211|Alphaproteobacteria	L	C-5 cytosine-specific DNA methylase	-	-	2.1.1.37	ko:K00558	ko00270,ko01100,ko05206,map00270,map01100,map05206	M00035	R04858	RC00003,RC00332	ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036	-	-	-	DNA_methylase
SX1_k127_1476678_2	1297865.APJD01000014_gene508	2.148e-246	763.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TQKE@28211|Alphaproteobacteria,3JRHU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	acyl-CoA dehydrogenase	MA20_27425	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_1476678_3	1297865.APJD01000014_gene507	2.863e-232	720.0	COG1024@1|root,COG1024@2|Bacteria,1MU0B@1224|Proteobacteria,2TQW3@28211|Alphaproteobacteria,3JT2M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	-	-	1.1.1.31,4.2.1.17	ko:K00020,ko:K01692	ko00071,ko00280,ko00281,ko00310,ko00360,ko00362,ko00380,ko00410,ko00627,ko00640,ko00650,ko00903,ko00930,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00310,map00360,map00362,map00380,map00410,map00627,map00640,map00650,map00903,map00930,map01100,map01110,map01120,map01130,map01212	M00032,M00087	R03026,R03045,R04137,R04170,R04204,R04224,R04738,R04740,R04744,R04746,R04749,R05066,R05595,R06411,R06412,R06942,R08093	RC00099,RC00831,RC00834,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_2
SX1_k127_1476678_4	1297865.APJD01000014_gene506	1.866e-184	578.0	COG2084@1|root,COG2084@2|Bacteria,1RA7F@1224|Proteobacteria,2UVAZ@28211|Alphaproteobacteria,3JRFH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the 3-hydroxyisobutyrate dehydrogenase family	mmsB	-	1.1.1.31	ko:K00020	ko00280,ko01100,map00280,map01100	-	R05066	RC00099	ko00000,ko00001,ko01000	-	-	-	NAD_binding_11,NAD_binding_2
SX1_k127_1476678_0	1297865.APJD01000014_gene505	0.0	1170.0	COG0365@1|root,COG0365@2|Bacteria,1MUF5@1224|Proteobacteria,2TRII@28211|Alphaproteobacteria,3JUCJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	AMP-binding enzyme C-terminal domain	MA20_27440	-	6.2.1.1,6.2.1.32	ko:K01895,ko:K08295	ko00010,ko00620,ko00627,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00627,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	M00357	R00235,R00236,R00316,R00926,R00982,R01354	RC00004,RC00012,RC00043,RC00070,RC00174,RC02746,RC02816	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_1476678_6	1297865.APJD01000014_gene504	7.919e-100	327.0	COG2030@1|root,COG2030@2|Bacteria,1RHPH@1224|Proteobacteria,2U9GG@28211|Alphaproteobacteria,3JV7C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	MaoC like domain	MA20_27445	-	-	-	-	-	-	-	-	-	-	-	MaoC_dehydratas
SX1_k127_1476678_7	1297865.APJD01000014_gene503	2.731e-24	102.0	2BI42@1|root,32C96@2|Bacteria,1P79P@1224|Proteobacteria,2UWK0@28211|Alphaproteobacteria,3K5C1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1489884_5	1297865.APJD01000001_gene5844	3.377e-23	98.0	COG0739@1|root,COG1388@1|root,COG0739@2|Bacteria,COG1388@2|Bacteria,1QV29@1224|Proteobacteria,2TW8Q@28211|Alphaproteobacteria,3JTS0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Lysin motif	lysM	-	-	-	-	-	-	-	-	-	-	-	LysM,Peptidase_M23
SX1_k127_1489884_2	1230476.C207_01465	2.267e-195	614.0	COG2607@1|root,COG2607@2|Bacteria,1MVMX@1224|Proteobacteria,2TTFE@28211|Alphaproteobacteria,3JRQI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF815)	MA20_41470	-	-	ko:K06923	-	-	-	-	ko00000	-	-	-	DUF815
SX1_k127_1489884_7	1380355.JNIJ01000024_gene2331	2.493e-07	52.0	COG1862@1|root,COG1862@2|Bacteria,1MZT2@1224|Proteobacteria,2UBZ6@28211|Alphaproteobacteria,3JYU5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Preprotein translocase subunit	yajC	-	-	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2	-	-	YajC
SX1_k127_1489884_4	1230476.C207_01466	2.779e-66	228.0	COG1862@1|root,COG1862@2|Bacteria,1MZT2@1224|Proteobacteria,2UBZ6@28211|Alphaproteobacteria,3JYU5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Preprotein translocase subunit	yajC	-	-	ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2	-	-	YajC
SX1_k127_1489884_0	1297865.APJD01000001_gene5841	0.0	1034.0	COG0342@1|root,COG0342@2|Bacteria,1MV5U@1224|Proteobacteria,2TQYG@28211|Alphaproteobacteria,3JSE2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA	secD	-	-	ko:K03072,ko:K12257	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	2.A.6.4,3.A.5.2,3.A.5.7	-	-	SecD_SecF,Sec_GG
SX1_k127_1489884_1	1297865.APJD01000001_gene5840	7.294e-208	649.0	COG0341@1|root,COG0341@2|Bacteria,1MU74@1224|Proteobacteria,2TSFW@28211|Alphaproteobacteria,3JUBX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA	secF	-	-	ko:K03072,ko:K03074	ko03060,ko03070,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	2.A.6.4,3.A.5.2,3.A.5.7	-	-	SecD_SecF,Sec_GG
SX1_k127_1489884_3	1297865.APJD01000001_gene5839	3.426e-79	265.0	COG3737@1|root,COG3737@2|Bacteria,1N083@1224|Proteobacteria,2U95K@28211|Alphaproteobacteria,3JYVC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF498/DUF598)	MA20_41450	-	-	-	-	-	-	-	-	-	-	-	DUF498
SX1_k127_1489884_6	1297865.APJD01000001_gene5838	7.088e-14	79.0	COG1562@1|root,COG1562@2|Bacteria,1MX4W@1224|Proteobacteria,2U08T@28211|Alphaproteobacteria,3JR6N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Squalene/phytoene synthase	crtB	-	2.5.1.32,2.5.1.99	ko:K02291,ko:K18163	ko00906,ko01062,ko01100,ko01110,ko04714,map00906,map01062,map01100,map01110,map04714	M00097	R02065,R04218,R07270,R10177	RC00362,RC01101,RC02869	ko00000,ko00001,ko00002,ko01000,ko01006,ko03029	-	-	-	SQS_PSY
SX1_k127_1502826_5	1297865.APJD01000009_gene2809	7.509e-127	406.0	COG0462@1|root,COG0462@2|Bacteria,1MW21@1224|Proteobacteria,2TR4Y@28211|Alphaproteobacteria,3JSEU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)	prs	-	2.7.6.1	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	M00005	R01049	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	Pribosyl_synth,Pribosyltran,Pribosyltran_N
SX1_k127_1502826_10	224911.27348412	0.0002675	53.0	2978Y@1|root,2ZUGP@2|Bacteria,1RD02@1224|Proteobacteria,2U7VP@28211|Alphaproteobacteria,3JZ2X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1502826_6	1297865.APJD01000009_gene2808	6.075e-112	363.0	2E5ZA@1|root,330NT@2|Bacteria,1NDA4@1224|Proteobacteria,2TUTP@28211|Alphaproteobacteria,3JWAB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_05405	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1502826_1	1297865.APJD01000009_gene2807	1.611e-200	625.0	COG0789@1|root,COG0789@2|Bacteria,1PEAF@1224|Proteobacteria,2TT54@28211|Alphaproteobacteria,3JWJA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, mercury resistance	-	-	-	-	-	-	-	-	-	-	-	-	MerR_1
SX1_k127_1502826_3	1297865.APJD01000009_gene2806	5.86e-165	519.0	COG1496@1|root,COG1496@2|Bacteria,1MW2H@1224|Proteobacteria,2TTXU@28211|Alphaproteobacteria,3JQYQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the multicopper oxidase YfiH RL5 family	yfiH	-	-	ko:K05810	-	-	-	-	ko00000,ko01000	-	-	-	Cu-oxidase_4
SX1_k127_1502826_0	1297865.APJD01000009_gene2805	2.125e-246	761.0	COG1565@1|root,COG1565@2|Bacteria,1N3CJ@1224|Proteobacteria,2TRHW@28211|Alphaproteobacteria,3JRRQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative S-adenosyl-L-methionine-dependent methyltransferase	MA20_05390	-	2.1.1.79	ko:K00574,ko:K18164	ko04714,map04714	-	-	-	ko00000,ko00001,ko01000,ko03029	-	-	-	Methyltransf_28
SX1_k127_1502826_2	1297865.APJD01000009_gene2804	7.322e-188	587.0	COG0682@1|root,COG0682@2|Bacteria,1MVE3@1224|Proteobacteria,2TTNS@28211|Alphaproteobacteria,3JQZ7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins	lgt	-	-	ko:K13292	-	-	-	-	ko00000,ko01000	-	-	-	LGT
SX1_k127_1502826_7	1230476.C207_03551	1.797e-95	316.0	COG0454@1|root,COG0456@2|Bacteria,1R6DW@1224|Proteobacteria,2U3QR@28211|Alphaproteobacteria,3JRBT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10
SX1_k127_1502826_4	1297865.APJD01000009_gene2802	1.485e-156	502.0	COG0412@1|root,COG0412@2|Bacteria,1NRB4@1224|Proteobacteria,2TU91@28211|Alphaproteobacteria,3JUQK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Dienelactone hydrolase family	-	-	3.1.1.45	ko:K01061	ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130	-	R03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222	RC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686	ko00000,ko00001,ko01000	-	-	-	DLH
SX1_k127_1502826_8	1297865.APJD01000009_gene2801	2.255e-43	160.0	COG2960@1|root,COG2960@2|Bacteria,1N725@1224|Proteobacteria,2UFEP@28211|Alphaproteobacteria,3K0BI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Membrane fusogenic activity	MA20_05375	-	-	ko:K09806	-	-	-	-	ko00000	-	-	-	BMFP
SX1_k127_1502826_9	1037409.BJ6T_18580	2.305e-29	117.0	COG1825@1|root,COG1825@2|Bacteria,1RDH0@1224|Proteobacteria,2U5P0@28211|Alphaproteobacteria,3JSHR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance	ctc	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02897	ko03010,map03010	M00178	-	-	ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L25p,Ribosomal_TL5_C
SX1_k127_1513246_2	1297865.APJD01000003_gene6123	1.222e-66	227.0	COG0318@1|root,COG0318@2|Bacteria,1MUIC@1224|Proteobacteria,2TT3K@28211|Alphaproteobacteria,3JV64@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	MA20_22915	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
SX1_k127_1513246_0	1297865.APJD01000003_gene6122	4.598e-194	610.0	COG2175@1|root,COG2175@2|Bacteria,1R5TE@1224|Proteobacteria,2U2FJ@28211|Alphaproteobacteria,3JS34@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Taurine catabolism dioxygenase TauD, TfdA family	-	-	-	ko:K06912	ko00361,ko01120,ko01220,map00361,map01120,map01220	-	R05419,R05493	RC01371,RC01372	ko00000,ko00001,ko01000	-	-	-	TauD
SX1_k127_1513246_1	1297865.APJD01000003_gene6121	4.334e-104	340.0	COG0747@1|root,COG0747@2|Bacteria,1MUZH@1224|Proteobacteria,2TT1G@28211|Alphaproteobacteria,3JQQ7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Bacterial extracellular solute-binding proteins, family 5 Middle	-	-	-	ko:K02035	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	SBP_bac_5
SX1_k127_151788_1	1297865.APJD01000005_gene3643	2.825e-110	356.0	COG1305@1|root,COG1305@2|Bacteria,1MVMI@1224|Proteobacteria,2TRFC@28211|Alphaproteobacteria,3JUN6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Transglutaminase/protease-like homologues	-	-	-	-	-	-	-	-	-	-	-	-	Bact_transglu_N,Transglut_core
SX1_k127_151788_0	1297865.APJD01000005_gene3644	8.006e-285	875.0	COG2199@1|root,COG3706@2|Bacteria,1MWHH@1224|Proteobacteria,2TSEP@28211|Alphaproteobacteria,3JV3W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Cache domain	-	-	-	-	-	-	-	-	-	-	-	-	GGDEF,dCache_1
SX1_k127_1523577_2	1297865.APJD01000021_gene3053	3.572e-135	443.0	COG1123@1|root,COG4172@2|Bacteria,1MU09@1224|Proteobacteria,2TQP0@28211|Alphaproteobacteria,3JRAE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the ABC transporter superfamily	-	-	-	ko:K02031,ko:K02032	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
SX1_k127_1523577_0	1297865.APJD01000021_gene3054	6.483e-162	526.0	COG1173@1|root,COG1173@2|Bacteria,1MVHY@1224|Proteobacteria,2TQVQ@28211|Alphaproteobacteria,3JS21@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	N-terminal TM domain of oligopeptide transport permease C	-	-	-	ko:K02034	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1,OppC_N
SX1_k127_1523577_1	1297865.APJD01000021_gene3055	1.108e-161	510.0	COG0601@1|root,COG0601@2|Bacteria,1MU8Z@1224|Proteobacteria,2TQJC@28211|Alphaproteobacteria,3JSJW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K02033	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
SX1_k127_1533298_2	1297865.APJD01000001_gene5910	1.502e-83	280.0	COG0790@1|root,COG4249@1|root,COG0790@2|Bacteria,COG4249@2|Bacteria,1MXFD@1224|Proteobacteria,2TR94@28211|Alphaproteobacteria,3JU08@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14,Sel1,TPR_19
SX1_k127_1533298_3	1230476.C207_01392	2.287e-76	257.0	COG1605@1|root,COG1605@2|Bacteria,1N6UE@1224|Proteobacteria,2V4R0@28211|Alphaproteobacteria,3JZ2T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Chorismate mutase type II	-	-	4.2.99.21	ko:K04782	ko01053,ko01110,ko01130,map01053,map01110,map01130	-	R06602	RC01549,RC02148	ko00000,ko00001,ko01000	-	-	-	CM_2
SX1_k127_1533298_0	1230476.C207_01391	3.261e-172	543.0	COG0329@1|root,COG0329@2|Bacteria,1MU77@1224|Proteobacteria,2TTNF@28211|Alphaproteobacteria,3JW0K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EM	Dihydrodipicolinate synthetase family	-	-	4.3.3.7	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R10147	RC03062,RC03063	ko00000,ko00001,ko00002,ko01000	-	-	-	DHDPS
SX1_k127_1533298_1	1297865.APJD01000001_gene5913	1.944e-86	286.0	COG1917@1|root,COG1917@2|Bacteria,1RB1D@1224|Proteobacteria,2TTYH@28211|Alphaproteobacteria,3JU91@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Cupin	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
SX1_k127_1540725_1	1304878.AUGD01000003_gene2783	1.54e-263	812.0	2CDQ7@1|root,2Z7KV@2|Bacteria,1MY2D@1224|Proteobacteria,2TR92@28211|Alphaproteobacteria,3JX05@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1540725_6	1304878.AUGD01000003_gene2782	3.486e-124	402.0	COG5340@1|root,COG5340@2|Bacteria,1R1GM@1224|Proteobacteria,2TTDH@28211|Alphaproteobacteria,3JV9C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Psort location Cytoplasmic, score	-	-	-	-	-	-	-	-	-	-	-	-	AbiEi_4
SX1_k127_1540725_4	1304878.AUGD01000003_gene2781	1.648e-174	549.0	COG5340@1|root,COG5340@2|Bacteria,1R1GM@1224|Proteobacteria,2TTDH@28211|Alphaproteobacteria,3JXVP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Psort location Cytoplasmic, score	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1540725_2	1304878.AUGD01000003_gene2780	2.574e-233	724.0	COG2253@1|root,COG2253@2|Bacteria,1PZRM@1224|Proteobacteria,2TTHC@28211|Alphaproteobacteria,3JRXM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Nucleotidyl transferase AbiEii toxin, Type IV TA system	-	-	-	-	-	-	-	-	-	-	-	-	AbiEii
SX1_k127_1540725_3	1304878.AUGD01000003_gene2779	4.986e-179	564.0	COG2197@1|root,COG2197@2|Bacteria,1R5TF@1224|Proteobacteria,2TR69@28211|Alphaproteobacteria,3JX1Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KT	response regulator	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1540725_7	1304878.AUGD01000003_gene2778	4.605e-113	369.0	28MGI@1|root,2ZATR@2|Bacteria,1R5N2@1224|Proteobacteria,2U3CU@28211|Alphaproteobacteria,3JVC6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1540725_0	1304878.AUGD01000003_gene2777	0.0	2208.0	COG0210@1|root,COG2856@1|root,COG0210@2|Bacteria,COG2856@2|Bacteria,1MZGR@1224|Proteobacteria,2TSRX@28211|Alphaproteobacteria,3JUSG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	IrrE N-terminal-like domain	-	-	-	-	-	-	-	-	-	-	-	-	PDDEXK_1,Peptidase_M78,UvrD-helicase,UvrD_C
SX1_k127_1540725_5	1297865.APJD01000033_gene6930	1.559e-141	449.0	28H70@1|root,2Z7JB@2|Bacteria,1R4R9@1224|Proteobacteria,2U1IS@28211|Alphaproteobacteria,3JTFU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Multiubiquitin	-	-	-	-	-	-	-	-	-	-	-	-	Multi_ubiq,Prok-E2_E
SX1_k127_1540899_5	172088.AUGA01000005_gene7919	1.008e-58	203.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,3JS1H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde dehydrogenase family	MA20_06215	-	1.2.1.3	ko:K00128	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	M00135	R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
SX1_k127_1540899_4	1297865.APJD01000009_gene2980	1.131e-73	249.0	COG2005@1|root,COG2005@2|Bacteria,1P9SX@1224|Proteobacteria,2UC9Q@28211|Alphaproteobacteria,3JYDZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bacterial regulatory helix-turn-helix protein, lysR family	modE	-	-	ko:K02019	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1
SX1_k127_1540899_2	1297865.APJD01000009_gene2979	5.152e-245	762.0	COG1902@1|root,COG1902@2|Bacteria,1MVIX@1224|Proteobacteria,2TT2F@28211|Alphaproteobacteria,3JU0K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NADH:flavin oxidoreductase / NADH oxidase family	MA20_06210	-	-	ko:K10680	ko00633,ko01120,map00633,map01120	-	R08014,R08017,R08042	RC00250	ko00000,ko00001,ko01000	-	-	-	Oxidored_FMN
SX1_k127_1540899_3	1297865.APJD01000009_gene2978	1.873e-115	372.0	COG3791@1|root,COG3791@2|Bacteria,1PRCW@1224|Proteobacteria,2U4AZ@28211|Alphaproteobacteria,3JXGC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Glutathione-dependent formaldehyde-activating enzyme	MA20_06205	-	-	-	-	-	-	-	-	-	-	-	GFA
SX1_k127_1540899_6	1297865.APJD01000009_gene2977	8.999e-54	191.0	29CMP@1|root,32HQ9@2|Bacteria,1P2XZ@1224|Proteobacteria,2UU3U@28211|Alphaproteobacteria,3K4MA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1540899_0	1297865.APJD01000009_gene2976	0.0	1104.0	COG0028@1|root,COG0028@2|Bacteria,1MX6Q@1224|Proteobacteria,2TS3K@28211|Alphaproteobacteria,3JUFH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Belongs to the TPP enzyme family	MA20_06195	-	4.1.1.7	ko:K01576	ko00627,ko01120,map00627,map01120	-	R01764,R02672	RC00595	ko00000,ko00001,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
SX1_k127_1540899_1	1297865.APJD01000009_gene2975	1.666e-302	929.0	COG2141@1|root,COG2141@2|Bacteria,1MUJ9@1224|Proteobacteria,2TQKS@28211|Alphaproteobacteria,3JTAR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Luciferase-like monooxygenase	MA20_06190	-	1.14.14.5	ko:K04091	ko00920,map00920	-	R07210,R10206	RC01779,RC02556	ko00000,ko00001,ko01000	-	-	-	Bac_luciferase
SX1_k127_1540899_7	1297865.APJD01000009_gene2974	7.957e-13	69.0	COG0624@1|root,COG0624@2|Bacteria,1MW20@1224|Proteobacteria,2TTGM@28211|Alphaproteobacteria,3JT2B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Peptidase family M20/M25/M40	MA20_06185	-	-	-	-	-	-	-	-	-	-	-	M20_dimer,Peptidase_M20
SX1_k127_1546298_1	1297865.APJD01000033_gene7021	1.805e-240	743.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JSCZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme	acsf	-	-	ko:K00666	-	-	-	-	ko00000,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_1546298_2	1297865.APJD01000033_gene7022	7.406e-211	657.0	COG0524@1|root,COG0524@2|Bacteria,1MUUC@1224|Proteobacteria,2TS9D@28211|Alphaproteobacteria,3JTT2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	pfkB family carbohydrate kinase	pfkB	-	2.7.1.20,2.7.1.4	ko:K00847,ko:K00856	ko00051,ko00230,ko00500,ko00520,ko01100,map00051,map00230,map00500,map00520,map01100	-	R00185,R00760,R00867,R03920	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	PfkB
SX1_k127_1546298_0	1297865.APJD01000033_gene7023	1.775e-304	937.0	COG0728@1|root,COG0728@2|Bacteria,1MUH0@1224|Proteobacteria,2TS44@28211|Alphaproteobacteria,3JS7U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane	murJ	-	-	ko:K03980	-	-	-	-	ko00000,ko01011,ko02000	2.A.66.4	-	-	MVIN
SX1_k127_1546298_3	113395.AXAI01000003_gene5979	1.522e-115	374.0	COG0180@1|root,COG0180@2|Bacteria,1MV4T@1224|Proteobacteria,2TQZX@28211|Alphaproteobacteria,3JT4N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Tryptophanyl-tRNA synthetase	trpS	-	6.1.1.2	ko:K01867	ko00970,map00970	M00359,M00360	R03664	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_1b
SX1_k127_1548678_1	1297865.APJD01000014_gene462	7.733e-278	856.0	COG0044@1|root,COG0044@2|Bacteria,1MVXY@1224|Proteobacteria,2TSTM@28211|Alphaproteobacteria,3JSMQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily	pyrC	-	3.5.2.3	ko:K01465	ko00240,ko01100,map00240,map01100	M00051	R01993	RC00632	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1
SX1_k127_1548678_9	1297865.APJD01000014_gene463	9.944e-120	386.0	COG0344@1|root,COG0344@2|Bacteria,1RD4Z@1224|Proteobacteria,2U7BZ@28211|Alphaproteobacteria,3JRDJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP	plsY	-	2.3.1.15	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R00851,R09380	RC00004,RC00039,RC00041	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	G3P_acyltransf
SX1_k127_1548678_2	1297865.APJD01000014_gene464	4.706e-260	803.0	COG0154@1|root,COG0154@2|Bacteria,1MWRI@1224|Proteobacteria,2TTJU@28211|Alphaproteobacteria,3JVBW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Amidase	MA20_36405	-	6.3.5.6,6.3.5.7	ko:K02433	ko00970,ko01100,map00970,map01100	-	R03905,R04212	RC00010	ko00000,ko00001,ko01000,ko03029	-	-	-	Amidase
SX1_k127_1548678_3	1297865.APJD01000014_gene465	7.054e-229	711.0	COG0758@1|root,COG0758@2|Bacteria,1MVF6@1224|Proteobacteria,2TRQE@28211|Alphaproteobacteria,3JU47@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	LU	DNA recombination-mediator protein A	dprA	-	-	ko:K04096	-	-	-	-	ko00000	-	-	-	DNA_processg_A
SX1_k127_1548678_12	1297865.APJD01000014_gene466	1.562e-82	274.0	COG1733@1|root,COG1733@2|Bacteria,1MZ6N@1224|Proteobacteria,2UC19@28211|Alphaproteobacteria,3JYXT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	HxlR-like helix-turn-helix	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
SX1_k127_1548678_7	1297865.APJD01000014_gene467	1.025e-123	398.0	COG1182@1|root,COG1182@2|Bacteria,1P59R@1224|Proteobacteria,2U63R@28211|Alphaproteobacteria,3JW5Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity	azoR	-	-	ko:K01118	-	-	-	-	ko00000,ko01000	-	-	-	Flavodoxin_2
SX1_k127_1548678_5	1297865.APJD01000014_gene468	1.193e-183	574.0	COG4312@1|root,COG4312@2|Bacteria,1NAXN@1224|Proteobacteria,2TTHB@28211|Alphaproteobacteria,3JSA2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bacterial protein of unknown function (DUF899)	MA20_01595	-	-	-	-	-	-	-	-	-	-	-	DUF899
SX1_k127_1548678_11	1297865.APJD01000014_gene469	7.063e-91	300.0	COG1846@1|root,COG1846@2|Bacteria,1N1CJ@1224|Proteobacteria,2U1AG@28211|Alphaproteobacteria,3JT43@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR_2
SX1_k127_1548678_6	1297865.APJD01000014_gene470	5.452e-164	526.0	COG0697@1|root,COG0697@2|Bacteria,1MXJY@1224|Proteobacteria,2TVBG@28211|Alphaproteobacteria,3JXDP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_1548678_0	1297865.APJD01000014_gene471	0.0	1052.0	COG0457@1|root,COG0457@2|Bacteria,1MUZK@1224|Proteobacteria,2TS0U@28211|Alphaproteobacteria,3JRSC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_9,TPR_1,TPR_11,TPR_16,TPR_19,TPR_2,TPR_4,TPR_8
SX1_k127_1548678_4	1297865.APJD01000014_gene472	1.628e-185	581.0	COG0454@1|root,COG1846@1|root,COG0456@2|Bacteria,COG1846@2|Bacteria,1MWIC@1224|Proteobacteria,2TST3@28211|Alphaproteobacteria,3JRSN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Acetyltransferase (GNAT) domain	MA20_27725	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10,MarR_2
SX1_k127_1548678_14	258594.RPA0628	1.351e-05	53.0	COG3409@1|root,COG5480@1|root,COG3409@2|Bacteria,COG5480@2|Bacteria,1P9ZA@1224|Proteobacteria,2TSTF@28211|Alphaproteobacteria,3JVQW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Protein of unknown function (DUF1036)	MA20_21840	-	-	-	-	-	-	-	-	-	-	-	DUF1036,PG_binding_1
SX1_k127_1548678_10	1297865.APJD01000014_gene473	2.584e-102	333.0	COG0242@1|root,COG0242@2|Bacteria,1RFCS@1224|Proteobacteria,2U715@28211|Alphaproteobacteria,3JUD9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions	def2	GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564	3.5.1.88	ko:K01462	-	-	-	-	ko00000,ko01000	-	-	-	Pep_deformylase
SX1_k127_1548678_8	1297865.APJD01000014_gene474	1.927e-121	389.0	COG1680@1|root,COG1680@2|Bacteria,1P3SQ@1224|Proteobacteria,2U0E0@28211|Alphaproteobacteria,3JS2D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase	MA20_27655	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SX1_k127_15490_0	1297865.APJD01000019_gene3287	4.475e-258	796.0	COG1485@1|root,COG1485@2|Bacteria,1MUUW@1224|Proteobacteria,2TRG1@28211|Alphaproteobacteria,3JRCC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	AFG1-like ATPase	zapE	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0006091,GO:0006119,GO:0006123,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016310,GO:0017144,GO:0019538,GO:0019637,GO:0019646,GO:0019693,GO:0022900,GO:0022904,GO:0030163,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0034641,GO:0035694,GO:0042773,GO:0042775,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0071840,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901565,GO:1901575	-	ko:K06916	-	-	-	-	ko00000,ko03036	-	-	-	AFG1_ATPase
SX1_k127_15490_2	1230476.C207_04668	1.94e-207	645.0	COG0039@1|root,COG0039@2|Bacteria,1MV57@1224|Proteobacteria,2TSV6@28211|Alphaproteobacteria,3JRQU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Catalyzes the reversible oxidation of malate to oxaloacetate	mdh	GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019752,GO:0030060,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350	1.1.1.37	ko:K00024	ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00012,M00168,M00173,M00346,M00374,M00620,M00740	R00342,R07136	RC00031	ko00000,ko00001,ko00002,ko01000	-	-	-	Ldh_1_C,Ldh_1_N
SX1_k127_15490_1	1297865.APJD01000019_gene3289	1.175e-251	778.0	COG0045@1|root,COG0045@2|Bacteria,1MVCE@1224|Proteobacteria,2TRXK@28211|Alphaproteobacteria,3JRMM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit	sucC	GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350	6.2.1.5	ko:K01903	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00173,M00374,M00620	R00405,R02404	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	-	ATP-grasp_2,Ligase_CoA
SX1_k127_15490_3	1297865.APJD01000019_gene3290	7.015e-103	342.0	2CGEX@1|root,32U4B@2|Bacteria,1MWWW@1224|Proteobacteria,2TT01@28211|Alphaproteobacteria,3JSQK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1579)	MA20_43845	-	-	-	-	-	-	-	-	-	-	-	DUF1579
SX1_k127_15490_4	1297865.APJD01000019_gene3291	2.861e-95	312.0	COG0074@1|root,COG0074@2|Bacteria,1MUGA@1224|Proteobacteria,2TQKB@28211|Alphaproteobacteria,3JRGB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit	sucD	-	6.2.1.5	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00173,M00374,M00620	R00405,R02404	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	-	CoA_binding,Ligase_CoA
SX1_k127_1551899_1	1038859.AXAU01000011_gene2455	1.53e-133	426.0	COG0480@1|root,COG0480@2|Bacteria,1MUCV@1224|Proteobacteria,2TQVI@28211|Alphaproteobacteria,3JS6N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome	fusA	-	-	ko:K02355	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2
SX1_k127_1551899_3	1230476.C207_01624	1.095e-93	308.0	COG0049@1|root,COG0049@2|Bacteria,1MXC8@1224|Proteobacteria,2TSI8@28211|Alphaproteobacteria,3JS8U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA	rpsG	GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02992	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S7
SX1_k127_1551899_4	1297865.APJD01000002_gene4079	7.57e-72	246.0	COG0048@1|root,COG0048@2|Bacteria,1RCWY@1224|Proteobacteria,2U70K@28211|Alphaproteobacteria,3JY1D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit	rpsL	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02950	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosom_S12_S23
SX1_k127_1551899_0	1297865.APJD01000002_gene4078	1.007e-263	814.0	COG0654@1|root,COG0654@2|Bacteria,1MUEW@1224|Proteobacteria,2TUIB@28211|Alphaproteobacteria,3JU6H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	FAD binding domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3
SX1_k127_1551899_2	1297865.APJD01000002_gene4077	2.49e-124	399.0	COG1132@1|root,COG1132@2|Bacteria,1MUBM@1224|Proteobacteria,2TQMR@28211|Alphaproteobacteria,3JSJZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	ABC transporter transmembrane region	MA20_35245	-	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
SX1_k127_1563409_3	1297865.APJD01000018_gene5714	3.089e-148	473.0	COG0600@1|root,COG0600@2|Bacteria,1MWDJ@1224|Proteobacteria,2U325@28211|Alphaproteobacteria,3JU8J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Binding-protein-dependent transport system inner membrane component	ssuC	-	-	ko:K15554	ko00920,ko02010,map00920,map02010	M00436	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.17.2	-	-	BPD_transp_1
SX1_k127_1563409_2	1297865.APJD01000018_gene5713	5.604e-150	481.0	COG1116@1|root,COG1116@2|Bacteria,1N1Q0@1224|Proteobacteria,2U5WP@28211|Alphaproteobacteria,3JWM2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system	ssuB	-	-	ko:K15555	ko00920,ko02010,map00920,map02010	M00436	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.17.2	-	-	ABC_tran
SX1_k127_1563409_1	1297865.APJD01000018_gene5712	8.046e-215	669.0	COG0715@1|root,COG0715@2|Bacteria,1R66U@1224|Proteobacteria,2TRWT@28211|Alphaproteobacteria,3JQRP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NMT1-like family	-	-	-	ko:K15553	ko00920,ko02010,map00920,map02010	M00436	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.17.2	-	-	NMT1
SX1_k127_1563409_0	1297865.APJD01000018_gene5711	1.541e-261	807.0	COG1960@1|root,COG1960@2|Bacteria,1NF2C@1224|Proteobacteria,2TQMG@28211|Alphaproteobacteria,3JWE1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_2,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_1563409_4	1297865.APJD01000018_gene5710	8.288e-117	386.0	COG1853@1|root,COG1853@2|Bacteria,1R57A@1224|Proteobacteria,2U1PF@28211|Alphaproteobacteria,3JX30@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Flavin reductase like domain	-	-	-	-	-	-	-	-	-	-	-	-	Flavin_Reduct
SX1_k127_1563409_5	1230476.C207_02080	4.34e-41	152.0	COG1045@1|root,COG1045@2|Bacteria,1MVFX@1224|Proteobacteria,2TTNU@28211|Alphaproteobacteria,3JU28@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Bacterial transferase hexapeptide (six repeats)	srpH	-	2.3.1.30	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	M00021	R00586	RC00004,RC00041	ko00000,ko00001,ko00002,ko01000	-	-	-	Hexapep,SATase_N
SX1_k127_1566974_4	1297865.APJD01000019_gene3340	4.691e-90	298.0	COG2072@1|root,COG2072@2|Bacteria,1MUQH@1224|Proteobacteria,2TRG4@28211|Alphaproteobacteria,3JSRW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Flavin-binding monooxygenase-like	-	-	1.14.13.226	ko:K18371	ko00640,map00640	-	R10704	RC03250	ko00000,ko00001,ko01000	-	-	-	FMO-like,Pyr_redox_2,Pyr_redox_3
SX1_k127_1566974_2	1297865.APJD01000019_gene3339	4.631e-201	629.0	COG4977@1|root,COG4977@2|Bacteria,1MXZQ@1224|Proteobacteria,2U0GT@28211|Alphaproteobacteria,3JUZN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	ko:K07506	-	-	-	-	ko00000,ko03000	-	-	-	HTH_18,HTH_AraC
SX1_k127_1566974_1	1297865.APJD01000019_gene3338	1.376e-226	703.0	COG0667@1|root,COG0667@2|Bacteria,1MV2Y@1224|Proteobacteria,2TS02@28211|Alphaproteobacteria,3JT9N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldo/keto reductase family	mocA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0017144,GO:0034641,GO:0042723,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:1901360,GO:1901564	1.1.1.91	ko:K05882	-	-	-	-	ko00000,ko01000	-	-	-	Aldo_ket_red
SX1_k127_1566974_0	1297865.APJD01000019_gene3337	2.915e-228	711.0	COG0477@1|root,COG2814@2|Bacteria,1MU9G@1224|Proteobacteria,2TSPI@28211|Alphaproteobacteria,3JTZ1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Uncharacterised MFS-type transporter YbfB	araJ	-	-	ko:K19577	-	-	-	-	ko00000,ko02000	2.A.1.2.65	-	-	MFS_1
SX1_k127_1566974_3	1230476.C207_06373	1.26e-157	497.0	COG0583@1|root,COG0583@2|Bacteria,1MU7H@1224|Proteobacteria,2TS72@28211|Alphaproteobacteria,3JUZY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_1569989_1	1297865.APJD01000001_gene5873	4.701e-48	173.0	COG1309@1|root,COG1309@2|Bacteria,1R7JI@1224|Proteobacteria,2U0P5@28211|Alphaproteobacteria,3JU8I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_C_4,TetR_N
SX1_k127_1569989_0	1297865.APJD01000001_gene5872	1.013e-257	795.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TREJ@28211|Alphaproteobacteria,3JU2P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	ivd2	-	1.3.8.4	ko:K00253	ko00280,ko01100,map00280,map01100	M00036	R04095	RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_1572235_2	1297865.APJD01000033_gene6976	1.836e-208	649.0	COG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2TQWK@28211|Alphaproteobacteria,3JTZB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter family receptor	MA20_23605	-	-	-	-	-	-	-	-	-	-	-	TctC
SX1_k127_1572235_13	1297865.APJD01000033_gene6975	2.22e-50	180.0	2AITW@1|root,319AY@2|Bacteria,1N4RI@1224|Proteobacteria,2UDG0@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3551)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3551
SX1_k127_1572235_8	1297865.APJD01000033_gene6974	7.249e-97	317.0	COG0640@1|root,COG0640@2|Bacteria,1RH5P@1224|Proteobacteria,2U960@28211|Alphaproteobacteria,3JYB5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20
SX1_k127_1572235_10	1297865.APJD01000033_gene6973	4.331e-73	254.0	COG3832@1|root,COG3832@2|Bacteria,1RI3S@1224|Proteobacteria,2UB60@28211|Alphaproteobacteria,3JXJH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
SX1_k127_1572235_3	1297865.APJD01000033_gene6972	8.303e-166	521.0	COG4312@1|root,COG4312@2|Bacteria,1NAXN@1224|Proteobacteria,2U16Z@28211|Alphaproteobacteria,3JU8V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bacterial protein of unknown function (DUF899)	-	-	-	-	-	-	-	-	-	-	-	-	DUF899
SX1_k127_1572235_11	1297865.APJD01000033_gene6971	1.185e-72	248.0	COG5507@1|root,COG5507@2|Bacteria,1RHC1@1224|Proteobacteria,2UC7A@28211|Alphaproteobacteria,3JYUE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1428)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1428
SX1_k127_1572235_6	1297865.APJD01000033_gene6970	3.431e-126	406.0	2BACU@1|root,323T9@2|Bacteria,1R49S@1224|Proteobacteria,2TSC0@28211|Alphaproteobacteria,3JTIY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1572235_12	1187851.A33M_1874	1.848e-50	183.0	COG0640@1|root,COG0640@2|Bacteria,1R9XP@1224|Proteobacteria,2U5PE@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	Winged helix DNA-binding domain	MA20_23570	-	-	-	-	-	-	-	-	-	-	-	HTH_34
SX1_k127_1572235_4	1297865.APJD01000033_gene6968	8.586e-154	486.0	COG0020@1|root,COG0020@2|Bacteria,1MVP1@1224|Proteobacteria,2TU0N@28211|Alphaproteobacteria,3JT02@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids	MA20_23565	GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617	2.5.1.31	ko:K00806	ko00900,ko01110,map00900,map01110	-	R06447	RC00279,RC02839	ko00000,ko00001,ko01000,ko01006	-	-	-	Prenyltransf
SX1_k127_1572235_0	1297865.APJD01000033_gene6967	0.0	1077.0	COG1032@1|root,COG1032@2|Bacteria,1MWR0@1224|Proteobacteria,2TUPK@28211|Alphaproteobacteria,3JVM0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Mg-protoporphyrin IX monomethyl ester oxidative cyclase 66kD subunit	bchE	-	1.21.98.3	ko:K04034	ko00860,ko01100,ko01110,map00860,map01100,map01110	-	R06268,R06269,R06270	RC00741,RC01491,RC01492	ko00000,ko00001,ko01000	-	-	-	B12-binding,Radical_SAM
SX1_k127_1572235_9	1297865.APJD01000033_gene6966	1.085e-75	256.0	2AF7X@1|root,31570@2|Bacteria,1RFGV@1224|Proteobacteria,2U722@28211|Alphaproteobacteria,3JYUG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1572235_16	1230476.C207_03848	1.423e-14	75.0	29ZWS@1|root,30MY5@2|Bacteria,1P9KN@1224|Proteobacteria,2UX24@28211|Alphaproteobacteria,3K5M3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1572235_15	1230476.C207_03847	5.082e-15	76.0	2BG00@1|root,329VZ@2|Bacteria,1NJ1K@1224|Proteobacteria,2UMGQ@28211|Alphaproteobacteria,3K22P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1572235_1	1297865.APJD01000033_gene6964	1.551e-255	790.0	COG1171@1|root,COG1171@2|Bacteria,1MVWJ@1224|Proteobacteria,2TQN9@28211|Alphaproteobacteria,3JVM1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Pyridoxal-phosphate dependent enzyme	MA20_41440	-	4.3.1.19	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	M00570	R00220,R00996	RC00418,RC02600	ko00000,ko00001,ko00002,ko01000	-	-	-	ACT,ACT_4,PALP
SX1_k127_1572235_17	172088.AUGA01000001_gene6300	0.0006291	42.0	2EHAM@1|root,33B2H@2|Bacteria,1RAIW@1224|Proteobacteria,2U5TZ@28211|Alphaproteobacteria,3JY03@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1572235_7	1297865.APJD01000033_gene6963	4.292e-101	330.0	COG3797@1|root,COG3797@2|Bacteria,1N0SN@1224|Proteobacteria,2VGGI@28211|Alphaproteobacteria,3JRQ0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1697)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1697
SX1_k127_1572235_5	1297865.APJD01000033_gene6962	2.57e-138	441.0	COG0625@1|root,COG0625@2|Bacteria,1PBD7@1224|Proteobacteria,2U0HQ@28211|Alphaproteobacteria,3JSA1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Belongs to the GST superfamily	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_N,GST_N_3
SX1_k127_1572235_14	1297865.APJD01000033_gene6961	1.925e-32	126.0	2CBFH@1|root,301X3@2|Bacteria,1NA88@1224|Proteobacteria,2UHA9@28211|Alphaproteobacteria,3K1CE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_44740	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_157613_3	398525.KB900701_gene5841	2.624e-13	69.0	COG2202@1|root,COG5001@1|root,COG2202@2|Bacteria,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,3JQV4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Diguanylate cyclase	MA20_31570	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,PAS_4,PAS_7,PAS_8
SX1_k127_157613_0	1297865.APJD01000014_gene807	4.767e-228	707.0	28NPA@1|root,308U9@2|Bacteria,1RG7C@1224|Proteobacteria,2TW0T@28211|Alphaproteobacteria,3JWQ4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_31605	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_157613_1	1297865.APJD01000014_gene808	4.487e-217	675.0	COG1752@1|root,COG1752@2|Bacteria,1MUM9@1224|Proteobacteria,2TVQR@28211|Alphaproteobacteria,3JS5E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Patatin-like phospholipase	rssA	GO:0003674,GO:0003824,GO:0016787	-	ko:K07001	-	-	-	-	ko00000	-	-	-	Patatin
SX1_k127_157613_2	1297865.APJD01000014_gene809	9.258e-27	109.0	COG0517@1|root,COG0517@2|Bacteria,1N0H3@1224|Proteobacteria,2UC0F@28211|Alphaproteobacteria,3JY3F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain in cystathionine beta-synthase and other proteins.	MA20_31615	-	-	-	-	-	-	-	-	-	-	-	CBS
SX1_k127_1580332_0	1297865.APJD01000009_gene2881	3.636e-247	764.0	COG3705@1|root,COG3705@2|Bacteria,1MWIG@1224|Proteobacteria,2TTQ4@28211|Alphaproteobacteria,3JRWT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Histidyl-tRNA synthetase	hisZ	-	-	ko:K02502	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R01071	RC02819,RC03200	ko00000,ko00001,ko00002	-	-	-	tRNA-synt_His
SX1_k127_1580332_1	1297865.APJD01000009_gene2882	4.965e-205	640.0	COG0040@1|root,COG0040@2|Bacteria,1MUCY@1224|Proteobacteria,2TT0H@28211|Alphaproteobacteria,3JTWP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity	hisG	GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.4.2.17	ko:K00765	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R01071	RC02819,RC03200	ko00000,ko00001,ko00002,ko01000	-	-	-	HisG,HisG_C
SX1_k127_1580332_2	1297865.APJD01000009_gene2883	1.167e-191	598.0	COG0463@1|root,COG0463@2|Bacteria,1MWE5@1224|Proteobacteria,2TRRT@28211|Alphaproteobacteria,3JSQQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	glycosyl transferase family 2	MA20_05865	-	-	ko:K20534	-	-	-	-	ko00000,ko01000,ko01005,ko02000	4.D.2.1.9	GT2	-	Glycos_transf_2
SX1_k127_1580332_7	1230476.C207_03478	6.529e-22	94.0	COG0463@1|root,COG0463@2|Bacteria,1MWE5@1224|Proteobacteria,2TRRT@28211|Alphaproteobacteria,3JSQQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	glycosyl transferase family 2	MA20_05865	-	-	ko:K20534	-	-	-	-	ko00000,ko01000,ko01005,ko02000	4.D.2.1.9	GT2	-	Glycos_transf_2
SX1_k127_1580332_3	1297865.APJD01000009_gene2884	3.058e-180	574.0	COG3394@1|root,COG3394@2|Bacteria,1MX3P@1224|Proteobacteria,2TV3U@28211|Alphaproteobacteria,3JSVK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	YdjC-like protein	-	-	3.5.1.105	ko:K03478	-	-	-	-	ko00000,ko01000	-	-	-	YdjC
SX1_k127_1580332_5	1297865.APJD01000009_gene2885	3.259e-171	541.0	COG3416@1|root,COG3416@2|Bacteria,1P8CZ@1224|Proteobacteria,2U6C3@28211|Alphaproteobacteria,3JQZ9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized protein conserved in bacteria (DUF2076)	-	-	-	ko:K09945	-	-	-	-	ko00000	-	-	-	DUF2076
SX1_k127_1580332_4	1297865.APJD01000009_gene2886	1.767e-174	550.0	COG1376@1|root,COG1376@2|Bacteria,1MVYT@1224|Proteobacteria,2U60K@28211|Alphaproteobacteria,3JQSZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	ErfK YbiS YcfS YnhG	-	-	-	-	-	-	-	-	-	-	-	-	YkuD
SX1_k127_1580332_8	883078.HMPREF9695_03523	0.0002646	46.0	COG1376@1|root,COG1376@2|Bacteria,1MVYT@1224|Proteobacteria,2U60K@28211|Alphaproteobacteria,3JQSZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	ErfK YbiS YcfS YnhG	-	-	-	-	-	-	-	-	-	-	-	-	YkuD
SX1_k127_1580332_6	1230476.C207_03474	5.046e-152	482.0	COG3143@1|root,COG3143@2|Bacteria,1MW23@1224|Proteobacteria,2TTS0@28211|Alphaproteobacteria,3JSV0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NT	Chemotaxis phosphatase, CheZ	MA20_05885	-	-	ko:K03414	ko02030,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	CheZ
SX1_k127_1580607_5	1297865.APJD01000026_gene2405	7.87e-113	365.0	COG1752@1|root,COG1752@2|Bacteria,1NT1Q@1224|Proteobacteria,2TRM3@28211|Alphaproteobacteria,3JRE2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Patatin-like phospholipase	MA20_41185	-	-	-	-	-	-	-	-	-	-	-	Patatin
SX1_k127_1580607_1	1297865.APJD01000026_gene2406	3.358e-250	773.0	COG0343@1|root,COG0343@2|Bacteria,1MUCA@1224|Proteobacteria,2TR87@28211|Alphaproteobacteria,3JRZH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)	tgt	-	2.4.2.29	ko:K00773	-	-	R03789,R10209	RC00063	ko00000,ko01000,ko03016	-	-	-	TGT
SX1_k127_1580607_9	1297865.APJD01000026_gene2407	1.409e-41	153.0	29U58@1|root,30FEV@2|Bacteria,1NJV0@1224|Proteobacteria,2UK2Z@28211|Alphaproteobacteria,3K1QT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_41175	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1580607_2	1230476.C207_01520	1.481e-197	617.0	COG0031@1|root,COG0031@2|Bacteria,1MUBE@1224|Proteobacteria,2TS33@28211|Alphaproteobacteria,3JQMM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the cysteine synthase cystathionine beta- synthase family	cysK	-	2.5.1.47	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	M00021	R00897,R03601,R04859	RC00020,RC02814,RC02821	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
SX1_k127_1580607_8	1297865.APJD01000026_gene2409	1.086e-43	159.0	COG3514@1|root,COG3514@2|Bacteria,1MZPR@1224|Proteobacteria,2UCYI@28211|Alphaproteobacteria,3K08A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	BrnA antitoxin of type II toxin-antitoxin system	-	-	-	-	-	-	-	-	-	-	-	-	BrnA_antitoxin
SX1_k127_1580607_3	1297865.APJD01000026_gene2410	5.547e-172	542.0	COG0697@1|root,COG0697@2|Bacteria,1MV7Y@1224|Proteobacteria,2TUVM@28211|Alphaproteobacteria,3JV2F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_1580607_7	1297865.APJD01000026_gene2411	8.479e-83	275.0	COG0251@1|root,COG0251@2|Bacteria,1RHSP@1224|Proteobacteria,2U5IT@28211|Alphaproteobacteria,3JY85@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Endoribonuclease L-PSP	MA20_41120	-	-	-	-	-	-	-	-	-	-	-	Ribonuc_L-PSP
SX1_k127_1580607_6	1230476.C207_01525	2.346e-94	314.0	2C2M3@1|root,316DE@2|Bacteria,1NJKQ@1224|Proteobacteria,2U28W@28211|Alphaproteobacteria,3JWHZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1580607_4	1297865.APJD01000026_gene2413	9.701e-121	398.0	COG0223@1|root,COG0223@2|Bacteria,1Q7FH@1224|Proteobacteria,2TT9S@28211|Alphaproteobacteria,3JTMQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Formyl transferase	MA20_41110	-	2.1.2.9	ko:K00604	ko00670,ko00970,map00670,map00970	-	R03940	RC00026,RC00165	ko00000,ko00001,ko01000	-	-	-	Formyl_trans_N
SX1_k127_1580607_0	1297865.APJD01000026_gene2414	1.882e-269	832.0	COG1253@1|root,COG1253@2|Bacteria,1MV3P@1224|Proteobacteria,2TS80@28211|Alphaproteobacteria,3JRBA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function DUF21	tlyC	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03699	-	-	-	-	ko00000,ko02042	-	-	-	CBS,CorC_HlyC,DUF21
SX1_k127_158538_12	1297865.APJD01000006_gene4543	2.152e-43	160.0	COG2020@1|root,COG2020@2|Bacteria,1MWU6@1224|Proteobacteria,2TU80@28211|Alphaproteobacteria,3JQR6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	methyltransferase activity	-	-	2.1.1.334	ko:K21310	ko00920,map00920	-	R11546	RC02653	ko00000,ko00001,ko01000	-	-	-	NnrU,PEMT
SX1_k127_158538_1	1297865.APJD01000006_gene4542	2e-323	992.0	COG0457@1|root,COG3710@1|root,COG5616@1|root,COG0457@2|Bacteria,COG3710@2|Bacteria,COG5616@2|Bacteria,1MUMZ@1224|Proteobacteria,2TRUI@28211|Alphaproteobacteria,3JR8W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylate cyclase	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc,TPR_16,TPR_2,TPR_8,Trans_reg_C
SX1_k127_158538_6	224911.27355511	4.117e-139	447.0	COG1376@1|root,COG1376@2|Bacteria,1MVYT@1224|Proteobacteria,2U2MV@28211|Alphaproteobacteria,3JRNH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	L,D-transpeptidase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	YkuD
SX1_k127_158538_5	1297865.APJD01000006_gene4540	7.662e-146	463.0	COG1028@1|root,COG1028@2|Bacteria,1PP5H@1224|Proteobacteria,2TTQV@28211|Alphaproteobacteria,3JTU3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	MA20_35765	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_158538_11	1297865.APJD01000006_gene4539	8.135e-46	169.0	2ADH2@1|root,314W5@2|Bacteria,1NBTS@1224|Proteobacteria,2UHVW@28211|Alphaproteobacteria,3K134@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_158538_9	172088.AUGA01000004_gene3980	3.077e-70	239.0	COG0784@1|root,COG0784@2|Bacteria,1RIB9@1224|Proteobacteria,2U9C0@28211|Alphaproteobacteria,3JZDZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
SX1_k127_158538_2	1297865.APJD01000006_gene4537	2.771e-258	797.0	COG3921@1|root,COG3921@2|Bacteria,1N3WR@1224|Proteobacteria,2U1ZC@28211|Alphaproteobacteria,3JQY3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Extensin-like protein C-terminus	-	-	-	-	-	-	-	-	-	-	-	-	Extensin-like_C
SX1_k127_158538_7	1297865.APJD01000006_gene4535	1.615e-128	419.0	COG1309@1|root,COG1309@2|Bacteria	2|Bacteria	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_158538_0	1297865.APJD01000006_gene4534	0.0	2224.0	COG4625@1|root,COG4625@2|Bacteria,1MU92@1224|Proteobacteria,2TSB7@28211|Alphaproteobacteria,3JUBZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Autotransporter beta-domain	-	-	-	-	-	-	-	-	-	-	-	-	Autotransporter,PATR
SX1_k127_158538_13	172088.AUGA01000004_gene3982	9.546e-09	57.0	2AHG3@1|root,317TD@2|Bacteria,1NKP5@1224|Proteobacteria,2UKZG@28211|Alphaproteobacteria,3K220@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_158538_8	1297865.APJD01000006_gene4532	2.05e-81	271.0	2C5RS@1|root,2ZYFA@2|Bacteria,1RJZM@1224|Proteobacteria,2UAYW@28211|Alphaproteobacteria,3JZVP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_158538_3	1297865.APJD01000006_gene4531	7.167e-165	519.0	COG4731@1|root,COG4731@2|Bacteria,1NBSV@1224|Proteobacteria,2TV31@28211|Alphaproteobacteria,3JX82@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized protein conserved in bacteria (DUF2147)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2147
SX1_k127_158538_10	1297865.APJD01000006_gene4530	1.549e-64	223.0	COG4731@1|root,COG4731@2|Bacteria,1MY67@1224|Proteobacteria,2TZZE@28211|Alphaproteobacteria,3JWVG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized protein conserved in bacteria (DUF2147)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2147
SX1_k127_1589026_1	1297865.APJD01000018_gene5717	4.965e-163	514.0	COG1053@1|root,COG1053@2|Bacteria,1NZBR@1224|Proteobacteria,2TSN4@28211|Alphaproteobacteria,3JS97@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	asfA	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_2,Succ_DH_flav_C
SX1_k127_1589026_0	1297865.APJD01000018_gene5716	1.852e-258	799.0	COG2141@1|root,COG2141@2|Bacteria,1MUVN@1224|Proteobacteria,2TR26@28211|Alphaproteobacteria,3JT0A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Luciferase-like monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	Bac_luciferase
SX1_k127_1599512_1	1297865.APJD01000052_gene1221	4.835e-164	525.0	COG0457@1|root,COG0457@2|Bacteria,1MUZK@1224|Proteobacteria,2TS0U@28211|Alphaproteobacteria,3JXGS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Glycosyltransferase family 9 (heptosyltransferase)	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_9,TPR_11,TPR_16,TPR_2,TPR_8
SX1_k127_1599512_0	1297865.APJD01000052_gene1222	0.0	1508.0	COG0457@1|root,COG3914@1|root,COG0457@2|Bacteria,COG3914@2|Bacteria,1MVMG@1224|Proteobacteria,2TRVB@28211|Alphaproteobacteria,3JR8N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_41,TPR_16,TPR_19,TPR_2,TPR_8
SX1_k127_1599512_2	1297865.APJD01000052_gene1223	1.304e-114	370.0	COG0226@1|root,COG0226@2|Bacteria,1PZ5I@1224|Proteobacteria,2TVJD@28211|Alphaproteobacteria,3JWQV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	PBP superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	PBP_like_2
SX1_k127_1603475_3	1297865.APJD01000010_gene4997	1.15e-28	114.0	COG1167@1|root,COG1167@2|Bacteria,1MVGT@1224|Proteobacteria,2TRK7@28211|Alphaproteobacteria,3JUC3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Aminotransferase class I and II	-	-	-	ko:K00375	-	-	-	-	ko00000,ko03000	-	-	-	Aminotran_1_2,GntR
SX1_k127_1603475_2	1297865.APJD01000010_gene4996	8.197e-76	256.0	COG1393@1|root,COG1393@2|Bacteria,1MZ6S@1224|Proteobacteria,2U98B@28211|Alphaproteobacteria,3JYSH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the ArsC family	MA20_27840	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	1.20.4.1	ko:K00537	-	-	-	-	ko00000,ko01000	-	-	-	ArsC
SX1_k127_1603475_0	1297865.APJD01000010_gene4995	3.186e-242	748.0	COG0596@1|root,COG0596@2|Bacteria,1MWT6@1224|Proteobacteria,2TSCE@28211|Alphaproteobacteria,3JSZA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Alpha/beta hydrolase family	MA20_19645	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
SX1_k127_1603475_1	1297865.APJD01000010_gene4994	7.18e-106	345.0	COG0457@1|root,COG3710@1|root,COG5616@1|root,COG0457@2|Bacteria,COG3710@2|Bacteria,COG5616@2|Bacteria,1MUMZ@1224|Proteobacteria,2TRUI@28211|Alphaproteobacteria,3JR8W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylate cyclase	-	-	-	-	-	-	-	-	-	-	-	-	TPR_19,Trans_reg_C
SX1_k127_160427_0	1297865.APJD01000003_gene6464	2.894e-219	679.0	COG1835@1|root,COG1835@2|Bacteria,1MV2W@1224|Proteobacteria,2TRT8@28211|Alphaproteobacteria,3JVHT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
SX1_k127_160427_1	1297865.APJD01000003_gene6465	2.026e-146	465.0	COG3820@1|root,COG3820@2|Bacteria,1MVR2@1224|Proteobacteria,2TT8Z@28211|Alphaproteobacteria,3JT5H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1013)	MA20_20925	-	-	ko:K09987	-	-	-	-	ko00000	-	-	-	DUF1013
SX1_k127_160427_2	1230476.C207_02593	1.568e-14	75.0	COG0761@1|root,COG0761@2|Bacteria,1MU7G@1224|Proteobacteria,2TRNR@28211|Alphaproteobacteria,3JSP9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IM	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis	ispH	-	1.17.7.4	ko:K03527	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05884,R08210	RC01137,RC01487	ko00000,ko00001,ko00002,ko01000	-	-	-	LYTB
SX1_k127_1613477_0	1297865.APJD01000018_gene5696	0.0	993.0	COG3210@1|root,COG3210@2|Bacteria,1MXIP@1224|Proteobacteria,2TTVB@28211|Alphaproteobacteria,3K3NX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	haemagglutination activity domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF3739,Haemagg_act
SX1_k127_1614489_0	1297865.APJD01000043_gene5813	4.046e-200	627.0	COG3842@1|root,COG3842@2|Bacteria,1MU3I@1224|Proteobacteria,2TQMJ@28211|Alphaproteobacteria,3JS4Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the ABC transporter superfamily	-	-	-	ko:K02052	ko02024,map02024	M00193	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.11	-	-	ABC_tran,TOBE_2
SX1_k127_1614489_1	1297865.APJD01000043_gene5814	1.085e-155	494.0	COG1177@1|root,COG1177@2|Bacteria,1N0SF@1224|Proteobacteria,2TRZ7@28211|Alphaproteobacteria,3JWY9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02053	ko02024,map02024	M00193	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.11	-	-	BPD_transp_1
SX1_k127_1614489_2	1297865.APJD01000043_gene5815	1.816e-117	379.0	COG0555@1|root,COG0555@2|Bacteria,1NQQ5@1224|Proteobacteria,2TQUP@28211|Alphaproteobacteria,3JX5N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02053	ko02024,map02024	M00193	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.11	-	-	BPD_transp_1
SX1_k127_1624945_1	279238.Saro_2559	1.521e-17	88.0	COG3749@1|root,COG3749@2|Bacteria,1RJR9@1224|Proteobacteria,2UA02@28211|Alphaproteobacteria,2K4PM@204457|Sphingomonadales	204457|Sphingomonadales	S	protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	DUF934
SX1_k127_1624945_0	279238.Saro_2558	8.854e-274	846.0	COG0155@1|root,COG0155@2|Bacteria,1MVVB@1224|Proteobacteria,2TRCR@28211|Alphaproteobacteria,2K14A@204457|Sphingomonadales	204457|Sphingomonadales	C	Sulfite reductase	cysI	-	1.8.1.2	ko:K00381	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00176	R00858	RC00065	ko00000,ko00001,ko00002,ko01000	-	-	-	NIR_SIR,NIR_SIR_ferr
SX1_k127_1630045_0	1297865.APJD01000005_gene3610	0.0	1114.0	COG2352@1|root,COG2352@2|Bacteria,1MUD5@1224|Proteobacteria,2TR6F@28211|Alphaproteobacteria,3JR8U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle	ppc	GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008964,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044444,GO:0044464	4.1.1.31	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	M00168,M00170,M00171,M00172,M00173,M00346,M00374	R00345	RC02741	ko00000,ko00001,ko00002,ko01000	-	-	-	PEPcase
SX1_k127_1631982_13	1297865.APJD01000007_gene1775	9.566e-14	70.0	COG2271@1|root,COG2271@2|Bacteria,1MUEK@1224|Proteobacteria,2U3VK@28211|Alphaproteobacteria,3JVR9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_1631982_4	1297865.APJD01000007_gene1774	1.34e-239	739.0	COG2159@1|root,COG2159@2|Bacteria,1MVHB@1224|Proteobacteria,2TVM0@28211|Alphaproteobacteria,3JW6H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Amidohydrolase	ligJ	-	4.1.1.45,4.2.1.83	ko:K03392,ko:K10220	ko00362,ko00380,ko01100,ko01120,map00362,map00380,map01100,map01120	M00038	R04323,R04478	RC00498,RC00779	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_2
SX1_k127_1631982_7	1297865.APJD01000007_gene1773	1.56e-140	448.0	COG0684@1|root,COG0684@2|Bacteria,1MW9P@1224|Proteobacteria,2TTGT@28211|Alphaproteobacteria,3JTVV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Aldolase/RraA	-	-	-	ko:K02553	-	-	-	-	ko00000,ko03019	-	-	-	RraA-like
SX1_k127_1631982_12	1297865.APJD01000007_gene1772	1.075e-74	252.0	COG5126@1|root,COG5126@2|Bacteria,1N18I@1224|Proteobacteria,2UDV5@28211|Alphaproteobacteria,3JY3B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	DTZ	EF-hand, calcium binding motif	MA20_34420	-	-	-	-	-	-	-	-	-	-	-	EF-hand_1,EF-hand_5,EF-hand_8
SX1_k127_1631982_1	1297865.APJD01000007_gene1771	0.0	1526.0	COG2010@1|root,COG4993@1|root,COG2010@2|Bacteria,COG4993@2|Bacteria,1MUQX@1224|Proteobacteria,2TS2Q@28211|Alphaproteobacteria,3JRZ3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	PQQ-like domain	-	-	1.1.9.1	ko:K17760	-	-	-	-	ko00000,ko01000	-	-	-	Cytochrom_C,Cytochrome_CBB3,PQQ,PQQ_2
SX1_k127_1631982_10	1297865.APJD01000007_gene1770	4.086e-123	397.0	COG2197@1|root,COG2197@2|Bacteria,1NU8C@1224|Proteobacteria,2UPV6@28211|Alphaproteobacteria,3K2WA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KT	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
SX1_k127_1631982_0	1297865.APJD01000007_gene1769	0.0	1703.0	COG1629@1|root,COG4771@2|Bacteria,1QU13@1224|Proteobacteria,2TWRB@28211|Alphaproteobacteria,3K6MT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SX1_k127_1631982_5	1297865.APJD01000007_gene1768	6.517e-156	494.0	COG1028@1|root,COG1028@2|Bacteria,1MU3W@1224|Proteobacteria,2TT5X@28211|Alphaproteobacteria,3JVEQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	1.1.1.53	ko:K00038	ko00140,ko01100,map00140,map01100	-	R04831,R04834,R04844,R04847	RC00139,RC01219,RC01220	ko00000,ko00001,ko01000	-	-	-	adh_short_C2
SX1_k127_1631982_8	1297865.APJD01000007_gene1767	1.477e-129	418.0	2BS9T@1|root,32MBF@2|Bacteria,1R7SY@1224|Proteobacteria,2U1SA@28211|Alphaproteobacteria,3JTIX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1631982_3	1297865.APJD01000007_gene1766	6.723e-263	812.0	COG0050@1|root,COG0050@2|Bacteria,1R949@1224|Proteobacteria,2U2JK@28211|Alphaproteobacteria,3JTX2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Elongation factor Tu C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	GTP_EFTU,GTP_EFTU_D2,GTP_EFTU_D3
SX1_k127_1631982_9	1297865.APJD01000007_gene1765	5.269e-124	399.0	COG1873@1|root,COG1873@2|Bacteria,1NADN@1224|Proteobacteria,2UHJI@28211|Alphaproteobacteria,3K1CJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PRC-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	PRC
SX1_k127_1631982_11	1297865.APJD01000007_gene1764	2.346e-78	262.0	2BTHG@1|root,30ZCG@2|Bacteria,1RKHQ@1224|Proteobacteria,2UA72@28211|Alphaproteobacteria,3JZCN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1631982_2	1297865.APJD01000007_gene1763	0.0	1494.0	COG1629@1|root,COG4771@2|Bacteria,1MWB3@1224|Proteobacteria,2U1DE@28211|Alphaproteobacteria,3JWSE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SX1_k127_1631982_6	1297865.APJD01000007_gene1762	5.089e-146	463.0	COG0697@1|root,COG0697@2|Bacteria,1MVKG@1224|Proteobacteria,2U30N@28211|Alphaproteobacteria,3JW6W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	-	-	-	ko:K15268	-	-	-	-	ko00000,ko02000	2.A.7.3.2	-	-	EamA
SX1_k127_1633968_5	1297865.APJD01000006_gene4611	2.6e-127	411.0	COG2114@1|root,COG2114@2|Bacteria,1RBTC@1224|Proteobacteria,2TV5V@28211|Alphaproteobacteria,3JQSU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc,dCache_1
SX1_k127_1633968_4	1297865.APJD01000006_gene4610	1.181e-140	457.0	COG0785@1|root,COG0785@2|Bacteria,1RCP7@1224|Proteobacteria,2TSAI@28211|Alphaproteobacteria,3JS7I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	cytochrome c biogenesis protein	MA20_17170	-	-	ko:K06196	-	-	-	-	ko00000,ko02000	5.A.1.2	-	-	DsbD
SX1_k127_1633968_6	1297865.APJD01000006_gene4609	8.636e-95	312.0	COG2259@1|root,COG2259@2|Bacteria,1R3TF@1224|Proteobacteria,2U457@28211|Alphaproteobacteria,3JWSG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	DoxX-like family	-	-	-	ko:K15977	-	-	-	-	ko00000	-	-	-	DoxX
SX1_k127_1633968_0	1297865.APJD01000006_gene4608	0.0	1193.0	COG1331@1|root,COG1331@2|Bacteria,1MUUT@1224|Proteobacteria,2TV0X@28211|Alphaproteobacteria,3JXPF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Protein of unknown function, DUF255	-	-	-	ko:K06888	-	-	-	-	ko00000	-	-	-	GlcNAc_2-epim,Thioredox_DsbH
SX1_k127_1633968_7	1297865.APJD01000006_gene4607	1.67e-44	165.0	2C39R@1|root,32UYY@2|Bacteria,1RDH2@1224|Proteobacteria,2UBQJ@28211|Alphaproteobacteria,3K0P1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1633968_8	1297865.APJD01000006_gene4606	1.717e-44	164.0	2C39R@1|root,32UYY@2|Bacteria,1N19H@1224|Proteobacteria,2UDTU@28211|Alphaproteobacteria,3K0P5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1633968_2	1297865.APJD01000006_gene4605	1.322e-190	597.0	COG3220@1|root,COG3220@2|Bacteria,1MURE@1224|Proteobacteria,2TRZJ@28211|Alphaproteobacteria,3JR0V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the UPF0276 family	-	-	-	ko:K09930	-	-	-	-	ko00000	-	-	-	DUF692
SX1_k127_1633968_3	1297865.APJD01000006_gene4604	1.757e-166	541.0	COG3219@1|root,COG3219@2|Bacteria,1QAP4@1224|Proteobacteria,2TTIN@28211|Alphaproteobacteria,3JTZ8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative DNA-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF2063
SX1_k127_1633968_1	1297865.APJD01000006_gene4603	6.407e-195	610.0	COG3975@1|root,COG3975@2|Bacteria,1N69B@1224|Proteobacteria,2U0ZK@28211|Alphaproteobacteria,3JS81@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1636023_1	1297865.APJD01000007_gene2318	2.637e-206	644.0	COG0438@1|root,COG0438@2|Bacteria,1MWSZ@1224|Proteobacteria,2TQQK@28211|Alphaproteobacteria,3JT3F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Glycosyltransferase Family 4	MA20_17390	-	2.4.1.348	ko:K12995	-	-	-	-	ko00000,ko01000,ko01003,ko01005	-	GT4	-	Glyco_transf_4,Glycos_transf_1
SX1_k127_1636023_0	1297865.APJD01000007_gene2319	2.192e-278	861.0	COG1132@1|root,COG1132@2|Bacteria,1MUBM@1224|Proteobacteria,2TQMR@28211|Alphaproteobacteria,3JQZ2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	ABC transporter transmembrane region	MA20_17385	-	-	ko:K06147,ko:K18893	ko02010,map02010	-	-	-	ko00000,ko00001,ko02000	3.A.1,3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
SX1_k127_1638234_0	1297865.APJD01000036_gene1405	0.0	1076.0	COG2804@1|root,COG2804@2|Bacteria,1MU7V@1224|Proteobacteria,2TRMU@28211|Alphaproteobacteria,3JV8C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	General secretion pathway protein E (Type II traffic warden ATPase)	gspE	-	-	ko:K02454	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	T2SSE,T2SSE_N
SX1_k127_1638234_1	1297865.APJD01000036_gene1406	1.365e-246	764.0	COG1459@1|root,COG1459@2|Bacteria,1MV4U@1224|Proteobacteria,2TV76@28211|Alphaproteobacteria,3JVGQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	General secretion pathway protein F	gspF	-	-	ko:K02455,ko:K02653	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02035,ko02044	3.A.15,3.A.15.2	-	-	T2SSF
SX1_k127_1638234_7	1230476.C207_05062	4.086e-93	308.0	COG2165@1|root,COG2165@2|Bacteria,1RDX2@1224|Proteobacteria,2U7GY@28211|Alphaproteobacteria,3JYH8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	general secretion pathway protein G	gspG	-	-	ko:K02456	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	N_methyl,T2SSG
SX1_k127_1638234_8	1297865.APJD01000036_gene1408	3.026e-88	292.0	COG4970@1|root,COG4970@2|Bacteria,1RBW1@1224|Proteobacteria,2U6X0@28211|Alphaproteobacteria,3JY0W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K02457	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	N_methyl
SX1_k127_1638234_9	1230476.C207_05064	5.274e-65	225.0	COG4967@1|root,COG4967@2|Bacteria,1N7XY@1224|Proteobacteria,2UGHB@28211|Alphaproteobacteria,3JZ0J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	type IV pilus modification protein PilV	-	-	-	ko:K02458	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	N_methyl
SX1_k127_1638234_4	1297865.APJD01000036_gene1410	3.733e-146	466.0	COG4967@1|root,COG4967@2|Bacteria,1Q12T@1224|Proteobacteria,2U0HI@28211|Alphaproteobacteria,3JVK6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K02459	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	N_methyl
SX1_k127_1638234_3	1297865.APJD01000036_gene1411	2.828e-186	589.0	COG3156@1|root,COG3156@2|Bacteria,1RJRE@1224|Proteobacteria,2TUMU@28211|Alphaproteobacteria,3JS8P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K02460	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	T2SSK
SX1_k127_1638234_2	1297865.APJD01000036_gene1412	7.077e-224	696.0	COG3166@1|root,COG3166@2|Bacteria,1RJTG@1224|Proteobacteria,2TUXN@28211|Alphaproteobacteria,3JW8G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K02461	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	PilN
SX1_k127_1638234_6	1297865.APJD01000036_gene1413	1.259e-106	347.0	2DTTW@1|root,32UVX@2|Bacteria,1R7IH@1224|Proteobacteria,2TQUA@28211|Alphaproteobacteria,3JXDE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Type II secretion system (T2SS), protein M subtype b	-	-	-	ko:K02462	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	T2SSM_b
SX1_k127_1638234_5	1297865.APJD01000036_gene1414	1.171e-128	424.0	2E9H8@1|root,333QC@2|Bacteria,1QQ46@1224|Proteobacteria,2TU89@28211|Alphaproteobacteria,3JSH7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	ko:K02463	ko05111,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	-
SX1_k127_1638234_10	398525.KB900701_gene635	2.571e-12	70.0	COG1989@1|root,COG1989@2|Bacteria,1PNQR@1224|Proteobacteria,2UBNI@28211|Alphaproteobacteria,3JYIT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NOU	Type IV leader peptidase family	-	-	3.4.23.43	ko:K02654	-	M00331	-	-	ko00000,ko00002,ko01000,ko01002,ko02035,ko02044	3.A.15.2	-	-	Peptidase_A24
SX1_k127_1638705_11	1297865.APJD01000011_gene6675	2.861e-173	543.0	COG0683@1|root,COG0683@2|Bacteria,1MV1Z@1224|Proteobacteria,2TRTD@28211|Alphaproteobacteria,3JS33@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_1638705_7	1297865.APJD01000011_gene6674	3.639e-258	799.0	COG0683@1|root,COG0683@2|Bacteria,1MV1Z@1224|Proteobacteria,2TRTD@28211|Alphaproteobacteria,3JS33@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	MA20_18620	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_1638705_2	1297865.APJD01000011_gene6673	7.235e-272	838.0	COG0683@1|root,COG0683@2|Bacteria,1MV1Z@1224|Proteobacteria,2TRTD@28211|Alphaproteobacteria,3JRR8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_1638705_5	1297865.APJD01000011_gene6672	7.088e-267	824.0	COG0683@1|root,COG0683@2|Bacteria,1MV1Z@1224|Proteobacteria,2TRTD@28211|Alphaproteobacteria,3JRR8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_1638705_4	1297865.APJD01000011_gene6671	4.776e-269	830.0	COG0683@1|root,COG0683@2|Bacteria,1MV1A@1224|Proteobacteria,2U134@28211|Alphaproteobacteria,3JU6P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_1638705_6	1297865.APJD01000011_gene6670	2.498e-266	823.0	COG2379@1|root,COG2379@2|Bacteria,1MVIK@1224|Proteobacteria,2TQJY@28211|Alphaproteobacteria,3JREE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	MOFRL family	MA20_18630	-	2.7.1.165	ko:K11529	ko00030,ko00260,ko00561,ko00630,ko00680,ko01100,ko01120,ko01130,ko01200,map00030,map00260,map00561,map00630,map00680,map01100,map01120,map01130,map01200	M00346	R08572	RC00002,RC00428	ko00000,ko00001,ko00002,ko01000	-	-	-	DUF4147,MOFRL
SX1_k127_1638705_16	172088.AUGA01000001_gene6652	2.608e-100	329.0	COG1846@1|root,COG1846@2|Bacteria,1N7PQ@1224|Proteobacteria,2UF5S@28211|Alphaproteobacteria,3JW0R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	MA20_18635	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SX1_k127_1638705_9	1297865.APJD01000011_gene6668	4.046e-200	627.0	COG0559@1|root,COG0559@2|Bacteria,1MXMC@1224|Proteobacteria,2TRYG@28211|Alphaproteobacteria,3JTK3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	MA20_18640	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_1638705_1	1297865.APJD01000011_gene6667	0.0	1135.0	COG0411@1|root,COG4177@1|root,COG0411@2|Bacteria,COG4177@2|Bacteria,1MUTY@1224|Proteobacteria,2TQVU@28211|Alphaproteobacteria,3JRTU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the binding-protein-dependent transport system permease family	MA20_18645	-	-	ko:K01995,ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C,BPD_transp_2
SX1_k127_1638705_14	1297865.APJD01000011_gene6666	3.58e-140	461.0	COG0410@1|root,COG0410@2|Bacteria,1MVVC@1224|Proteobacteria,2TSA6@28211|Alphaproteobacteria,3JSQY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ATPases associated with a variety of cellular activities	MA20_18650	-	-	ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran
SX1_k127_1638705_19	1038867.AXAY01000004_gene2471	0.0007936	44.0	COG2852@1|root,COG2852@2|Bacteria,1N0QU@1224|Proteobacteria,2UFZ7@28211|Alphaproteobacteria,3JYGV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF559)	-	-	-	-	-	-	-	-	-	-	-	-	DUF559
SX1_k127_1638705_8	1297865.APJD01000011_gene6665	9.727e-244	753.0	COG0683@1|root,COG0683@2|Bacteria,1MXR4@1224|Proteobacteria,2TU0F@28211|Alphaproteobacteria,3JS9I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	MA20_18725	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_1638705_18	1297865.APJD01000011_gene6664	7.106e-90	295.0	COG0824@1|root,COG0824@2|Bacteria,1MZPN@1224|Proteobacteria,2UCYR@28211|Alphaproteobacteria,3JY0U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Thioesterase-like superfamily	MA20_18720	-	3.1.2.23	ko:K01075	ko00130,ko00362,ko01100,ko01110,ko01120,map00130,map00362,map01100,map01110,map01120	-	R01301	RC00004,RC00174	ko00000,ko00001,ko01000	-	-	-	4HBT,4HBT_2
SX1_k127_1638705_13	1297865.APJD01000011_gene6663	1.086e-145	464.0	COG1028@1|root,COG1028@2|Bacteria,1MUBQ@1224|Proteobacteria,2TRPN@28211|Alphaproteobacteria,3JU36@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Belongs to the short-chain dehydrogenases reductases (SDR) family	MA20_18715	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_1638705_0	1297865.APJD01000011_gene6662	0.0	1261.0	COG0318@1|root,COG0318@2|Bacteria,1MUQZ@1224|Proteobacteria,2TRV7@28211|Alphaproteobacteria,3JSE9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme	MA20_18710	-	6.2.1.34	ko:K12508	-	-	-	-	ko00000,ko01000	-	-	-	AMP-binding
SX1_k127_1638705_12	1297865.APJD01000011_gene6661	4.751e-164	517.0	COG1024@1|root,COG1024@2|Bacteria,1MWYZ@1224|Proteobacteria,2TRNB@28211|Alphaproteobacteria,3JS4Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	MA20_18705	-	4.2.1.155	ko:K20036	ko00920,map00920	-	R10936	RC00004,RC03306,RC03307	ko00000,ko00001,ko01000	-	-	-	ECH_1
SX1_k127_1638705_17	1297865.APJD01000011_gene6660	2.123e-94	310.0	2DMP1@1|root,32SS8@2|Bacteria,1N0XZ@1224|Proteobacteria,2UBZ9@28211|Alphaproteobacteria,3JU71@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the UPF0311 family	MA20_18690	-	-	-	-	-	-	-	-	-	-	-	DUF3237
SX1_k127_1638705_3	1297865.APJD01000011_gene6659	1.835e-269	842.0	COG1593@1|root,COG1593@2|Bacteria,1MU0F@1224|Proteobacteria,2TQNK@28211|Alphaproteobacteria,3JTGN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Tripartite ATP-independent periplasmic transporter, DctM component	MA20_18685	-	-	-	-	-	-	-	-	-	-	-	DctM
SX1_k127_1638705_15	1297865.APJD01000011_gene6658	5.273e-118	381.0	COG3090@1|root,COG3090@2|Bacteria,1NDFB@1224|Proteobacteria,2U1K8@28211|Alphaproteobacteria,3JT8K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Tripartite ATP-independent periplasmic transporters, DctQ component	MA20_18680	-	-	-	-	-	-	-	-	-	-	-	DctQ
SX1_k127_1638705_10	1297865.APJD01000011_gene6657	6.747e-193	601.0	COG1638@1|root,COG1638@2|Bacteria,1MVHI@1224|Proteobacteria,2TQVT@28211|Alphaproteobacteria,3JTC3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Bacterial extracellular solute-binding protein, family 7	MA20_18675	-	-	-	-	-	-	-	-	-	-	-	DctP
SX1_k127_1640862_4	1297865.APJD01000036_gene1431	3.304e-132	421.0	COG2130@1|root,COG2130@2|Bacteria,1MUR0@1224|Proteobacteria,2U16B@28211|Alphaproteobacteria,3JSRG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2855)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2855
SX1_k127_1640862_0	1297865.APJD01000036_gene1430	0.0	1226.0	COG2072@1|root,COG2072@2|Bacteria,1MWPJ@1224|Proteobacteria,2TT05@28211|Alphaproteobacteria,3JS8N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Flavin-binding monooxygenase-like	-	-	-	-	-	-	-	-	-	-	-	-	Pyr_redox_3
SX1_k127_1640862_7	224911.27354970	0.0005894	52.0	COG2897@1|root,COG2897@2|Bacteria,1MW4B@1224|Proteobacteria,2TR9R@28211|Alphaproteobacteria,3JT1H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rhodanese Homology Domain	sseA	-	2.8.1.1,2.8.1.2	ko:K01011	ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122	-	R01931,R03105,R03106	RC00214	ko00000,ko00001,ko01000	-	-	-	Rhodanese
SX1_k127_1640862_3	1297865.APJD01000036_gene1429	5.756e-228	706.0	COG3391@1|root,COG3391@2|Bacteria,1NT97@1224|Proteobacteria,2TWGD@28211|Alphaproteobacteria,3JQU4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NHL repeat	MA20_20600	-	-	-	-	-	-	-	-	-	-	-	NHL
SX1_k127_1640862_1	1297865.APJD01000036_gene1428	0.0	1105.0	COG0038@1|root,COG0517@1|root,COG0038@2|Bacteria,COG0517@2|Bacteria,1MV4K@1224|Proteobacteria,2TTBG@28211|Alphaproteobacteria,3JQKU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Voltage gated chloride channel	-	-	-	ko:K03281	-	-	-	-	ko00000	2.A.49	-	-	CBS,Voltage_CLC
SX1_k127_1640862_5	1040989.AWZU01000001_gene5535	9.518e-126	402.0	COG1403@1|root,COG1403@2|Bacteria,1MWEQ@1224|Proteobacteria,2TR3M@28211|Alphaproteobacteria,3JS4T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	HNH endonuclease	MA20_20605	-	-	-	-	-	-	-	-	-	-	-	HNH,HNH_5
SX1_k127_1640862_6	1320556.AVBP01000016_gene2767	1.218e-20	99.0	COG1846@1|root,COG1846@2|Bacteria,1MZE9@1224|Proteobacteria,2TSUB@28211|Alphaproteobacteria,43K5D@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	K	COG1846 Transcriptional regulators	MA20_38125	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SX1_k127_1640862_2	1297865.APJD01000036_gene1426	0.0	1029.0	COG3203@1|root,COG3203@2|Bacteria,1MXN6@1224|Proteobacteria,2TSH7@28211|Alphaproteobacteria,3JQSQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane	ropAch1	-	-	-	-	-	-	-	-	-	-	-	Porin_2
SX1_k127_1641432_4	1297865.APJD01000005_gene3506	8.086e-121	387.0	COG1082@1|root,COG1082@2|Bacteria,1Q173@1224|Proteobacteria,2TTFM@28211|Alphaproteobacteria,3JRMB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Xylose isomerase-like TIM barrel	MA20_16875	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
SX1_k127_1641432_2	1297865.APJD01000005_gene3507	3.072e-251	775.0	COG1304@1|root,COG1304@2|Bacteria,1MUEZ@1224|Proteobacteria,2TQNW@28211|Alphaproteobacteria,3JTJY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	FMN-dependent dehydrogenase	lldD1	GO:0002218,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0006950,GO:0006952,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009058,GO:0009605,GO:0009607,GO:0009617,GO:0009987,GO:0010204,GO:0016999,GO:0017000,GO:0017144,GO:0023052,GO:0031347,GO:0031349,GO:0042579,GO:0042742,GO:0042743,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044424,GO:0044444,GO:0044464,GO:0045088,GO:0045089,GO:0048518,GO:0048583,GO:0048584,GO:0050665,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050896,GO:0051186,GO:0051188,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0072593,GO:0080134,GO:0098542,GO:1903409	1.1.2.3	ko:K00101	ko00620,ko01100,map00620,map01100	-	R00196	RC00044	ko00000,ko00001,ko01000	-	-	-	FMN_dh
SX1_k127_1641432_1	1297865.APJD01000005_gene3508	1.137e-266	821.0	COG4992@1|root,COG4992@2|Bacteria,1MV3C@1224|Proteobacteria,2TSGT@28211|Alphaproteobacteria,3JS3D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Aminotransferase class-III	rocD	GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363	2.6.1.11,2.6.1.13,2.6.1.17	ko:K00819,ko:K00821	ko00220,ko00300,ko00330,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map00330,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00028,M00845	R00667,R02283,R04475	RC00006,RC00062	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3
SX1_k127_1641432_3	1297865.APJD01000005_gene3509	5.78e-126	406.0	COG1226@1|root,32Y28@2|Bacteria,1NEAT@1224|Proteobacteria,2U33B@28211|Alphaproteobacteria,3JXU3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Ion channel	-	-	-	-	-	-	-	-	-	-	-	-	Ion_trans_2
SX1_k127_1641432_0	1297865.APJD01000005_gene3510	1.207e-272	844.0	COG2124@1|root,COG2124@2|Bacteria,1MY5H@1224|Proteobacteria,2TTRR@28211|Alphaproteobacteria,3JVM6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Cytochrome P450	MA20_16830	-	-	-	-	-	-	-	-	-	-	-	p450
SX1_k127_1641432_5	1297865.APJD01000005_gene3511	4.616e-108	351.0	COG4032@1|root,COG4032@2|Bacteria,1P0HU@1224|Proteobacteria,2TRJ2@28211|Alphaproteobacteria,3JQMU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain	MA20_16825	-	4.1.1.79	ko:K06034	ko00680,ko01120,map00680,map01120	M00358	R05774	RC00506	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_N
SX1_k127_1641432_6	1297865.APJD01000005_gene3512	5.094e-48	174.0	COG0028@1|root,COG0028@2|Bacteria,1R6QP@1224|Proteobacteria,2TXAJ@28211|Alphaproteobacteria,3JUDG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain	MA20_16820	-	-	-	-	-	-	-	-	-	-	-	TPP_enzyme_C
SX1_k127_1655426_0	1297865.APJD01000003_gene6114	3.01e-280	862.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JTDD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	-	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
SX1_k127_1655426_3	1297865.APJD01000003_gene6113	1.927e-194	607.0	COG3246@1|root,COG3246@2|Bacteria,1MZTP@1224|Proteobacteria,2TQKN@28211|Alphaproteobacteria,3JUXJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	beta-keto acid cleavage enzyme	MA20_22960	-	-	-	-	-	-	-	-	-	-	-	BKACE
SX1_k127_1655426_1	1297865.APJD01000003_gene6112	5.167e-268	827.0	COG0683@1|root,COG0683@2|Bacteria,1R8N8@1224|Proteobacteria,2U3GX@28211|Alphaproteobacteria,3JWFE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_1655426_4	1297865.APJD01000003_gene6111	1.044e-181	569.0	COG2207@1|root,COG2207@2|Bacteria,1N70D@1224|Proteobacteria,2U1QA@28211|Alphaproteobacteria,3JRXA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Helix-turn-helix domain	MA20_22965	-	-	-	-	-	-	-	-	-	-	-	HTH_18
SX1_k127_1655426_5	1297865.APJD01000003_gene6110	2.145e-141	451.0	COG0625@1|root,COG0625@2|Bacteria,1PA0Q@1224|Proteobacteria,2TVIC@28211|Alphaproteobacteria,3JVHC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, N-terminal domain	MA20_22970	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_2,GST_N,GST_N_3
SX1_k127_1655426_2	1297865.APJD01000003_gene6109	5.874e-259	798.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TR15@28211|Alphaproteobacteria,3JQQB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	MA20_22975	-	-	ko:K11731	ko00281,map00281	-	R08089	RC01893	ko00000,ko00001,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_1655426_6	1297865.APJD01000003_gene6108	4.088e-98	320.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TR15@28211|Alphaproteobacteria,3JSPS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	MA20_22980	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_1656214_0	1297865.APJD01000002_gene4157	1.03e-203	635.0	COG0329@1|root,COG0329@2|Bacteria,1MWV5@1224|Proteobacteria,2TRE1@28211|Alphaproteobacteria,3JSCD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EM	Belongs to the DapA family	MA20_35610	-	4.3.3.7	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R10147	RC03062,RC03063	ko00000,ko00001,ko00002,ko01000	-	-	-	DHDPS
SX1_k127_1656214_1	1297865.APJD01000002_gene4156	3.572e-131	418.0	COG1028@1|root,COG1028@2|Bacteria,1MXNQ@1224|Proteobacteria,2TUHP@28211|Alphaproteobacteria,3JRVY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Belongs to the short-chain dehydrogenases reductases (SDR) family	MA20_35605	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_1657965_2	1297865.APJD01000005_gene3573	5.066e-129	413.0	COG0657@1|root,COG0657@2|Bacteria,1MV3J@1224|Proteobacteria,2TUQ3@28211|Alphaproteobacteria,3JWES@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	alpha/beta hydrolase fold	-	-	3.5.1.9	ko:K01432	ko00380,ko00630,ko01100,map00380,map00630,map01100	M00038	R00988,R01959,R04911	RC00263,RC00323	ko00000,ko00001,ko00002,ko01000	-	-	-	Abhydrolase_3
SX1_k127_1657965_1	1297865.APJD01000005_gene3574	2.698e-161	511.0	COG4221@1|root,COG4221@2|Bacteria,1QW75@1224|Proteobacteria,2TWQR@28211|Alphaproteobacteria,3JTEM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	KR domain	MA20_16520	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_1657965_0	1297865.APJD01000005_gene3575	1.159e-240	743.0	COG0473@1|root,COG0473@2|Bacteria,1MUH4@1224|Proteobacteria,2TSBB@28211|Alphaproteobacteria,3JTGC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CE	Isocitrate/isopropylmalate dehydrogenase	MA20_16515	-	1.1.1.83,1.1.1.93,4.1.1.73	ko:K07246	ko00630,ko00650,map00630,map00650	-	R00215,R01751,R02545,R06180	RC00084,RC00105,RC00594	ko00000,ko00001,ko01000	-	-	-	Iso_dh
SX1_k127_1660497_7	1297865.APJD01000011_gene6675	2.508e-69	240.0	COG0683@1|root,COG0683@2|Bacteria,1MV1Z@1224|Proteobacteria,2TRTD@28211|Alphaproteobacteria,3JS33@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_1660497_2	1297865.APJD01000011_gene6676	5.346e-202	632.0	COG4177@1|root,COG4177@2|Bacteria,1P0DF@1224|Proteobacteria,2TUBF@28211|Alphaproteobacteria,3JUAN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	MA20_18610	-	-	ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_1660497_4	1297865.APJD01000011_gene6677	1.584e-176	554.0	COG0559@1|root,COG0559@2|Bacteria,1MXGK@1224|Proteobacteria,2TVKT@28211|Alphaproteobacteria,3JSJG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	MA20_18605	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_1660497_6	1297865.APJD01000011_gene6678	2.321e-147	470.0	COG0410@1|root,COG0410@2|Bacteria,1MVVC@1224|Proteobacteria,2U1BU@28211|Alphaproteobacteria,3JSYB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ABC transporter	MA20_18600	-	-	ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_1660497_5	1297865.APJD01000011_gene6679	5.046e-169	532.0	COG0411@1|root,COG0411@2|Bacteria,1MUTY@1224|Proteobacteria,2TSE7@28211|Alphaproteobacteria,3JRVG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	amino acid	livG	-	-	ko:K01995	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_1660497_3	1297865.APJD01000011_gene6680	5.147e-185	580.0	COG1414@1|root,COG1414@2|Bacteria,1MXRJ@1224|Proteobacteria,2TSJ7@28211|Alphaproteobacteria,3JSG4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix isocitrate lyase regulation	MA20_18590	-	-	ko:K05818	-	-	-	-	ko00000,ko03000	-	-	-	HTH_IclR,IclR
SX1_k127_1660497_0	1230476.C207_03168	0.0	1335.0	COG1024@1|root,COG1250@1|root,COG1024@2|Bacteria,COG1250@2|Bacteria,1MU9P@1224|Proteobacteria,2TS8E@28211|Alphaproteobacteria,3JRUN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the enoyl-CoA hydratase isomerase family	pimF	-	1.1.1.35	ko:K07516	ko00071,ko00362,ko00650,ko01100,ko01120,ko01200,ko01212,map00071,map00362,map00650,map01100,map01120,map01200,map01212	M00087	R01975,R04737,R04739,R04741,R04743,R04745,R04748,R05305	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000	-	-	-	3HCDH,3HCDH_N,ECH_1
SX1_k127_1660497_8	258594.RPA0210	3.95e-05	46.0	COG0564@1|root,COG0564@2|Bacteria,1MVJ5@1224|Proteobacteria,2TSCG@28211|Alphaproteobacteria,3JRTQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Pseudouridine synthase	MA20_43745	-	5.4.99.28,5.4.99.29	ko:K06177	-	-	-	-	ko00000,ko01000,ko03009,ko03016	-	-	-	PseudoU_synth_2
SX1_k127_1660497_1	1297865.APJD01000011_gene6682	0.0	1052.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JU6X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	MA20_18580	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
SX1_k127_1663095_2	1123267.JONN01000001_gene1962	2.168e-40	153.0	COG1680@1|root,COG1680@2|Bacteria,1RB35@1224|Proteobacteria,2U2A3@28211|Alphaproteobacteria,2K36P@204457|Sphingomonadales	204457|Sphingomonadales	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SX1_k127_1663095_1	1449076.JOOE01000002_gene1515	5.914e-52	188.0	COG3428@1|root,COG3428@2|Bacteria,1NHMM@1224|Proteobacteria,2UTQ8@28211|Alphaproteobacteria,2K5KN@204457|Sphingomonadales	204457|Sphingomonadales	S	Bacterial PH domain	-	-	-	-	-	-	-	-	-	-	-	-	bPH_2
SX1_k127_1663095_0	279238.Saro_2056	5.433e-55	199.0	COG4253@1|root,COG4253@2|Bacteria,1RFXU@1224|Proteobacteria,2VDXQ@28211|Alphaproteobacteria,2K6CH@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1663095_3	702113.PP1Y_AT25571	2.374e-07	58.0	COG2847@1|root,COG2847@2|Bacteria	2|Bacteria	P	Copper chaperone PCu(A)C	-	-	-	ko:K09796	-	-	-	-	ko00000,ko03110	-	-	-	PCuAC
SX1_k127_1665190_16	1297865.APJD01000010_gene4975	3.997e-67	228.0	COG4977@1|root,COG4977@2|Bacteria,1MUDK@1224|Proteobacteria,2TS7I@28211|Alphaproteobacteria,3JR98@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	DJ-1/PfpI family	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI,HTH_18
SX1_k127_1665190_12	1297865.APJD01000010_gene4976	1.846e-123	396.0	COG0406@1|root,COG0406@2|Bacteria,1RH8P@1224|Proteobacteria,2TVG2@28211|Alphaproteobacteria,3JXPM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	alpha-ribazole phosphatase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1665190_15	1297865.APJD01000010_gene4977	3.44e-69	237.0	COG2315@1|root,COG2315@2|Bacteria,1RHEZ@1224|Proteobacteria,2U97K@28211|Alphaproteobacteria,3JZ02@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	YjbR	-	-	-	-	-	-	-	-	-	-	-	-	YjbR
SX1_k127_1665190_13	1230476.C207_05748	1.382e-120	389.0	COG1695@1|root,COG1695@2|Bacteria,1RHSE@1224|Proteobacteria,2U1HF@28211|Alphaproteobacteria,3JVTZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	transcriptional regulator PadR family	yqjI	-	-	-	-	-	-	-	-	-	-	-	PadR
SX1_k127_1665190_11	1297865.APJD01000010_gene4979	5.705e-136	436.0	COG4122@1|root,COG4122@2|Bacteria,1N57D@1224|Proteobacteria,2TT8Y@28211|Alphaproteobacteria,3JTNU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	O-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_24,Methyltransf_3
SX1_k127_1665190_10	1297865.APJD01000010_gene4980	2.081e-146	466.0	COG3393@1|root,COG3393@2|Bacteria,1RAAU@1224|Proteobacteria,2TT9P@28211|Alphaproteobacteria,3JW0C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	FR47-like protein	MA20_27790	-	-	-	-	-	-	-	-	-	-	-	FR47
SX1_k127_1665190_2	1297865.APJD01000010_gene4981	1.826e-250	781.0	COG1680@1|root,COG1680@2|Bacteria,1QD0J@1224|Proteobacteria,2U189@28211|Alphaproteobacteria,3JY8N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SX1_k127_1665190_0	1297865.APJD01000010_gene4982	0.0	1273.0	COG5434@1|root,COG5434@2|Bacteria,1R7P2@1224|Proteobacteria,2U0DS@28211|Alphaproteobacteria,3JXFX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Right handed beta helix region	-	-	-	-	-	-	-	-	-	-	-	-	Beta_helix
SX1_k127_1665190_5	1297865.APJD01000010_gene4983	8.359e-193	602.0	COG0693@1|root,COG0693@2|Bacteria,1R41H@1224|Proteobacteria,2TUJM@28211|Alphaproteobacteria,3JXZN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	intracellular protease amidase	-	-	3.5.1.124,4.2.1.130	ko:K05523	ko00620,ko01120,map00620,map01120	-	R09796	RC02658	ko00000,ko00001,ko01000,ko01002	-	-	-	DJ-1_PfpI
SX1_k127_1665190_9	1297865.APJD01000010_gene4984	1.584e-146	465.0	COG2197@1|root,COG2197@2|Bacteria,1NH4V@1224|Proteobacteria,2TWZ4@28211|Alphaproteobacteria,3JWM3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Autoinducer binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Autoind_bind,GerE
SX1_k127_1665190_6	1297865.APJD01000010_gene4985	6.675e-192	600.0	COG0583@1|root,COG0583@2|Bacteria,1MZTA@1224|Proteobacteria,2U1KF@28211|Alphaproteobacteria,3JYYA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_1665190_4	1297865.APJD01000010_gene4986	4.602e-233	726.0	COG2271@1|root,COG2271@2|Bacteria,1QWJ9@1224|Proteobacteria,2TWZ5@28211|Alphaproteobacteria,3JW98@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_1665190_17	1230476.C207_05739	1.053e-64	223.0	2DP7H@1|root,330V6@2|Bacteria,1R3EB@1224|Proteobacteria,2U01I@28211|Alphaproteobacteria,3JYRG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Conserved hypothetical protein (Lin0512_fam)	MA20_27785	-	-	-	-	-	-	-	-	-	-	-	Lin0512_fam
SX1_k127_1665190_1	1297865.APJD01000010_gene4988	0.0	1158.0	COG0129@1|root,COG0129@2|Bacteria,1R7EQ@1224|Proteobacteria,2U2PJ@28211|Alphaproteobacteria,3JX2Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	Dehydratase family	-	-	-	-	-	-	-	-	-	-	-	-	ILVD_EDD
SX1_k127_1665190_7	1297865.APJD01000010_gene4989	1.362e-188	589.0	COG1028@1|root,COG1028@2|Bacteria,1PFUB@1224|Proteobacteria,2U149@28211|Alphaproteobacteria,3JUGF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	ko:K13774	ko00281,map00281	-	R08087,R08096,R10125,R10126	RC00080,RC00087	ko00000,ko00001	-	-	-	adh_short_C2
SX1_k127_1665190_8	398525.KB900701_gene4463	4.366e-151	478.0	COG0625@1|root,COG0625@2|Bacteria,1MUN3@1224|Proteobacteria,2TTVR@28211|Alphaproteobacteria,3JR7S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, C-terminal domain	MA20_27820	GO:0003674,GO:0003824,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0015036,GO:0016491,GO:0016667,GO:0050896,GO:0055114	-	ko:K11209	-	-	-	-	ko00000,ko01000	-	-	-	GST_C,GST_N,GST_N_3
SX1_k127_1665190_14	1297865.APJD01000010_gene4991	1.437e-111	361.0	COG1495@1|root,COG1495@2|Bacteria,1RKPG@1224|Proteobacteria,2U89W@28211|Alphaproteobacteria,3JUIX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Disulfide bond formation protein DsbB	-	-	-	-	-	-	-	-	-	-	-	-	DsbB
SX1_k127_1665190_18	1297865.APJD01000010_gene4992	2.284e-23	102.0	2DHZU@1|root,301ID@2|Bacteria,1N863@1224|Proteobacteria,2UHUG@28211|Alphaproteobacteria,3K1FX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1665190_3	1297865.APJD01000010_gene4993	5.648e-250	773.0	COG1301@1|root,COG1301@2|Bacteria,1MU0Q@1224|Proteobacteria,2TRET@28211|Alphaproteobacteria,3JQXY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate	dctA	-	-	ko:K11103	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.23.1.3,2.A.23.1.6,2.A.23.1.7	-	-	SDF
SX1_k127_1669008_4	1297865.APJD01000036_gene1516	3.369e-19	86.0	2BSBG@1|root,32MD9@2|Bacteria,1R813@1224|Proteobacteria,2U3H4@28211|Alphaproteobacteria,3JWD4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1669008_0	1297865.APJD01000036_gene1515	2.846e-210	653.0	COG2267@1|root,COG2267@2|Bacteria,1MWDA@1224|Proteobacteria,2TSZ4@28211|Alphaproteobacteria,3JU64@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Serine aminopeptidase, S33	pldB	-	3.1.1.5	ko:K01048	ko00564,map00564	-	-	-	ko00000,ko00001,ko01000	-	-	-	Hydrolase_4
SX1_k127_1669008_3	1297865.APJD01000036_gene1514	8.109e-95	311.0	COG0071@1|root,COG0071@2|Bacteria,1RH2X@1224|Proteobacteria,2U96D@28211|Alphaproteobacteria,3JYEA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Belongs to the small heat shock protein (HSP20) family	ibpA	-	-	ko:K04080	-	-	-	-	ko00000,ko03110	-	-	-	HSP20
SX1_k127_1669008_2	1297865.APJD01000036_gene1513	3.401e-151	481.0	COG3147@1|root,COG3147@2|Bacteria,1MVVA@1224|Proteobacteria,2U3ZH@28211|Alphaproteobacteria,3JWHM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Non-essential cell division protein that could be required for efficient cell constriction	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1669008_1	1297865.APJD01000036_gene1512	4.836e-190	595.0	COG0067@1|root,COG0069@1|root,COG0070@1|root,COG0067@2|Bacteria,COG0069@2|Bacteria,COG0070@2|Bacteria,1MU7B@1224|Proteobacteria,2TRHQ@28211|Alphaproteobacteria,3JSNT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glutamate synthase	gltB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.4.1.13,1.4.1.14	ko:K00265	ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230	-	R00093,R00114,R00248	RC00006,RC00010,RC02799	ko00000,ko00001,ko01000	-	-	-	GATase_2,GXGXG,Glu_syn_central,Glu_synthase
SX1_k127_1673239_0	696281.Desru_0600	9.118e-163	520.0	COG2721@1|root,COG2721@2|Bacteria,1TPTX@1239|Firmicutes,24AEC@186801|Clostridia,264UV@186807|Peptococcaceae	186801|Clostridia	G	PFAM D-galactarate dehydratase Altronate hydrolase	-	-	4.4.1.24	ko:K16846	ko00270,map00270	-	R07633	RC01785	ko00000,ko00001,ko01000	-	-	-	GD_AH_C
SX1_k127_1673239_1	457398.HMPREF0326_00714	7.814e-05	47.0	COG3875@1|root,COG3875@2|Bacteria,1R79Y@1224|Proteobacteria,42PGD@68525|delta/epsilon subdivisions,2WMB6@28221|Deltaproteobacteria,2M91N@213115|Desulfovibrionales	28221|Deltaproteobacteria	S	Domain of unknown function (DUF2088)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2088
SX1_k127_1674243_8	1297865.APJD01000018_gene5750	2.148e-47	172.0	COG1960@1|root,COG1960@2|Bacteria,1R3ZA@1224|Proteobacteria,2U0KZ@28211|Alphaproteobacteria,3JUXM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_1674243_7	1297865.APJD01000018_gene5751	2.659e-57	209.0	2BSQV@1|root,32MTP@2|Bacteria,1RA9P@1224|Proteobacteria,2U5MG@28211|Alphaproteobacteria,3JY73@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1674243_5	1297865.APJD01000018_gene5752	4.798e-141	458.0	COG0745@1|root,COG0745@2|Bacteria,1MU67@1224|Proteobacteria,2U261@28211|Alphaproteobacteria,3JTHT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Transcriptional regulatory protein, C terminal	-	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
SX1_k127_1674243_1	1297865.APJD01000018_gene5753	7.015e-281	865.0	COG0642@1|root,COG2205@2|Bacteria,1MW8M@1224|Proteobacteria,2TUSJ@28211|Alphaproteobacteria,3JSVN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain	-	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
SX1_k127_1674243_9	1304877.KI519399_gene3301	0.0002544	44.0	2A79Y@1|root,30W6M@2|Bacteria,1RD3K@1224|Proteobacteria,2U7AJ@28211|Alphaproteobacteria,3JYYU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1674243_6	1297865.APJD01000018_gene5754	2.121e-118	382.0	COG1182@1|root,COG1182@2|Bacteria,1NJP3@1224|Proteobacteria,2TT0Q@28211|Alphaproteobacteria,3JSSK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity	-	-	-	ko:K01118	-	-	-	-	ko00000,ko01000	-	-	-	Flavodoxin_2
SX1_k127_1674243_0	1297865.APJD01000018_gene5755	0.0	1100.0	COG1335@1|root,COG3386@1|root,COG1335@2|Bacteria,COG3386@2|Bacteria,1MU0C@1224|Proteobacteria,2TSXG@28211|Alphaproteobacteria,3JUN4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	GQ	SMP-30/Gluconolaconase/LRE-like region	MA20_13995	-	3.1.1.17	ko:K01053,ko:K14274	ko00030,ko00040,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00030,map00040,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220	M00129	R01519,R02427,R02933,R03751	RC00537,RC00713,RC00983	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Isochorismatase,SGL
SX1_k127_1674243_4	1297865.APJD01000018_gene5756	5.849e-189	592.0	COG0491@1|root,COG0491@2|Bacteria,1Q8EW@1224|Proteobacteria,2TUW0@28211|Alphaproteobacteria,3JWAV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metallo-beta-lactamase superfamily	MA20_13990	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
SX1_k127_1674243_2	1297865.APJD01000018_gene5757	2.584e-209	651.0	COG3618@1|root,COG3618@2|Bacteria,1MVG0@1224|Proteobacteria,2TRQX@28211|Alphaproteobacteria,3JRD4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_2
SX1_k127_1674243_3	1297865.APJD01000018_gene5758	7.327e-192	600.0	COG3552@1|root,COG3552@2|Bacteria,1MUEJ@1224|Proteobacteria,2TQQT@28211|Alphaproteobacteria,3JVY4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	VWA domain containing CoxE-like protein	-	-	-	ko:K07161	-	-	-	-	ko00000	-	-	-	VWA_CoxE
SX1_k127_1682592_1	1297865.APJD01000033_gene7011	1.123e-144	460.0	COG1024@1|root,COG1024@2|Bacteria,1NDT7@1224|Proteobacteria,2U2R9@28211|Alphaproteobacteria,3JWD5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	-	-	4.2.1.17	ko:K01692	ko00071,ko00280,ko00281,ko00310,ko00360,ko00362,ko00380,ko00410,ko00627,ko00640,ko00650,ko00903,ko00930,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00310,map00360,map00362,map00380,map00410,map00627,map00640,map00650,map00903,map00930,map01100,map01110,map01120,map01130,map01212	M00032,M00087	R03026,R03045,R04137,R04170,R04204,R04224,R04738,R04740,R04744,R04746,R04749,R05595,R06411,R06412,R06942,R08093	RC00831,RC00834,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
SX1_k127_1682592_0	1297865.APJD01000033_gene7013	5.815e-231	716.0	COG2021@1|root,COG2021@2|Bacteria,1R4V6@1224|Proteobacteria,2TTJ8@28211|Alphaproteobacteria,3K3II@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	alpha/beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
SX1_k127_1682592_3	258594.RPA0628	1.17e-05	50.0	COG3409@1|root,COG5480@1|root,COG3409@2|Bacteria,COG5480@2|Bacteria,1P9ZA@1224|Proteobacteria,2TSTF@28211|Alphaproteobacteria,3JVQW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Protein of unknown function (DUF1036)	MA20_21840	-	-	-	-	-	-	-	-	-	-	-	DUF1036,PG_binding_1
SX1_k127_1682592_2	1297865.APJD01000033_gene7014	3.101e-26	108.0	COG0659@1|root,COG0659@2|Bacteria,1MVWV@1224|Proteobacteria,2TVDS@28211|Alphaproteobacteria,3JTMZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Sulfate permease family	-	-	-	ko:K03321	-	-	-	-	ko00000,ko02000	2.A.53.3	-	-	STAS,Sulfate_transp,cNMP_binding
SX1_k127_1682734_4	1297865.APJD01000010_gene5102	6.181e-97	317.0	COG2207@1|root,COG2207@2|Bacteria,1Q1II@1224|Proteobacteria,2TUE0@28211|Alphaproteobacteria,3JS0J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding_2,HTH_18
SX1_k127_1682734_5	1297865.APJD01000010_gene5101	4.692e-89	294.0	COG2259@1|root,COG2259@2|Bacteria,1RIJS@1224|Proteobacteria,2UB1T@28211|Alphaproteobacteria,3JZMA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	HR-like lesion-inducing	-	-	-	-	-	-	-	-	-	-	-	-	DoxX
SX1_k127_1682734_0	1297865.APJD01000010_gene5100	0.0	1509.0	COG0280@1|root,COG0281@1|root,COG0280@2|Bacteria,COG0281@2|Bacteria,1MU0A@1224|Proteobacteria,2TQJT@28211|Alphaproteobacteria,3JSQR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Malic enzyme, NAD binding domain	dme	GO:0003674,GO:0003824,GO:0004470,GO:0004473,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0055114	1.1.1.40	ko:K00029	ko00620,ko00710,ko01100,ko01120,ko01200,map00620,map00710,map01100,map01120,map01200	M00169,M00172	R00216	RC00105	ko00000,ko00001,ko00002,ko01000	-	-	-	Malic_M,PTA_PTB,malic
SX1_k127_1682734_1	1297865.APJD01000010_gene5099	0.0	1279.0	2AJVW@1|root,31AIN@2|Bacteria,1R8N4@1224|Proteobacteria,2TU2Z@28211|Alphaproteobacteria,3JTQ2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1682734_2	1297865.APJD01000010_gene5097	0.0	1169.0	COG0642@1|root,COG0784@1|root,COG0784@2|Bacteria,COG2205@2|Bacteria,1MUY7@1224|Proteobacteria,2TR1M@28211|Alphaproteobacteria,3JW8Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_4,PAS_7,Response_reg,dCache_1
SX1_k127_1682734_6	1000565.METUNv1_01904	1.986e-45	171.0	COG2197@1|root,COG2197@2|Bacteria,1P4TD@1224|Proteobacteria,2VMX4@28216|Betaproteobacteria,2KW82@206389|Rhodocyclales	28216|Betaproteobacteria	K	COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain	epsR	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
SX1_k127_1683298_0	1380394.JADL01000020_gene1825	7.371e-86	294.0	COG0685@1|root,COG0685@2|Bacteria,1MXTZ@1224|Proteobacteria,2TWKE@28211|Alphaproteobacteria,2JRIW@204441|Rhodospirillales	28211|Alphaproteobacteria	E	Methylenetetrahydrofolate reductase	-	-	-	-	-	-	-	-	-	-	-	-	MTHFR
SX1_k127_1683298_2	1121106.JQKB01000009_gene196	3.976e-06	53.0	COG0654@1|root,COG0654@2|Bacteria,1MV8T@1224|Proteobacteria,2TRB8@28211|Alphaproteobacteria,2JQ4E@204441|Rhodospirillales	204441|Rhodospirillales	CH	FAD binding domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3
SX1_k127_1683298_1	627192.SLG_04410	8.427e-68	241.0	COG4993@1|root,COG4993@2|Bacteria,1MUQX@1224|Proteobacteria,2TS2Q@28211|Alphaproteobacteria,2K1V6@204457|Sphingomonadales	204457|Sphingomonadales	G	PQQ-like domain	-	-	1.1.5.2	ko:K00117	ko00030,ko01100,ko01110,ko01130,map00030,map01100,map01110,map01130	-	R06620	RC00066	ko00000,ko00001,ko01000	-	-	-	Cytochrome_CBB3,PQQ,PQQ_2
SX1_k127_1684817_6	1297865.APJD01000019_gene3090	3.781e-54	190.0	COG5405@1|root,COG5405@2|Bacteria,1MVF2@1224|Proteobacteria,2TRRE@28211|Alphaproteobacteria,3JRD8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery	hslV	-	3.4.25.2	ko:K01419	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Proteasome
SX1_k127_1684817_3	1297865.APJD01000019_gene3089	1.6e-124	400.0	COG0131@1|root,COG0131@2|Bacteria,1MWBS@1224|Proteobacteria,2TTVV@28211|Alphaproteobacteria,3JU1H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	imidazoleglycerol-phosphate dehydratase	hisB	GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.6.1.9,3.1.3.15,4.2.1.19	ko:K00817,ko:K01089,ko:K01693	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	M00026	R00694,R00734,R03013,R03243,R03457	RC00006,RC00017,RC00888,RC00932	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	IGPD
SX1_k127_1684817_4	1297865.APJD01000019_gene3088	8.962e-110	355.0	2BXM2@1|root,331PK@2|Bacteria,1MUGN@1224|Proteobacteria,2UFNI@28211|Alphaproteobacteria,3JW9M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2628)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2628
SX1_k127_1684817_7	1123240.ATVO01000004_gene1221	5.938e-52	194.0	COG0118@1|root,COG0118@2|Bacteria,1MU4X@1224|Proteobacteria,2TTT4@28211|Alphaproteobacteria,2K223@204457|Sphingomonadales	204457|Sphingomonadales	E	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR	hisH	-	-	ko:K02501	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04558	RC00010,RC01190,RC01943	ko00000,ko00001,ko00002,ko01000	-	-	-	GATase
SX1_k127_1684817_2	1297865.APJD01000019_gene3086	2.761e-151	484.0	COG0106@1|root,COG0106@2|Bacteria,1MW6S@1224|Proteobacteria,2TRSG@28211|Alphaproteobacteria,3JQMK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase	hisA	GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	5.3.1.16	ko:K01814	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04640	RC00945	ko00000,ko00001,ko00002,ko01000	-	-	-	His_biosynth
SX1_k127_1684817_1	1297865.APJD01000019_gene3085	1.658e-164	518.0	COG0107@1|root,COG0107@2|Bacteria,1MUS0@1224|Proteobacteria,2TQXD@28211|Alphaproteobacteria,3JTPS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit	hisF	GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763	-	ko:K02500	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04558	RC00010,RC01190,RC01943	ko00000,ko00001,ko00002,ko01000	-	-	-	His_biosynth
SX1_k127_1684817_5	1297865.APJD01000019_gene3084	4.323e-59	205.0	COG0140@1|root,COG0140@2|Bacteria,1MZEE@1224|Proteobacteria,2UBU3@28211|Alphaproteobacteria,3JZNP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	phosphoribosyl-ATP diphosphatase activity	hisE	-	3.6.1.31	ko:K01523	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04035	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	PRA-PH
SX1_k127_1684817_0	1297865.APJD01000019_gene3083	3.56e-207	645.0	COG1072@1|root,COG1072@2|Bacteria,1MV3M@1224|Proteobacteria,2TS7E@28211|Alphaproteobacteria,3JRQJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Pantothenic acid kinase	coaA	GO:0003674,GO:0003824,GO:0004594,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.7.1.33	ko:K00867	ko00770,ko01100,map00770,map01100	M00120	R02971,R03018,R04391	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	PRK
SX1_k127_1684817_8	1297865.APJD01000075_gene2642	2.262e-20	90.0	COG2826@1|root,COG2826@2|Bacteria,1PP49@1224|Proteobacteria,2TRVA@28211|Alphaproteobacteria,3JZ7D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Integrase core domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_38,rve
SX1_k127_1685875_2	1297865.APJD01000026_gene2515	5.781e-290	892.0	COG1593@1|root,COG3090@1|root,COG1593@2|Bacteria,COG3090@2|Bacteria,1MU0F@1224|Proteobacteria,2TSEZ@28211|Alphaproteobacteria,3JSEF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Tripartite ATP-independent periplasmic transporters, DctQ component	MA20_29425	-	-	-	-	-	-	-	-	-	-	-	DctM,DctQ
SX1_k127_1685875_1	1297865.APJD01000026_gene2514	0.0	1134.0	COG0318@1|root,COG0318@2|Bacteria,1MUMC@1224|Proteobacteria,2TR96@28211|Alphaproteobacteria,3JR8T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	MA20_29420	-	6.2.1.48	ko:K00666,ko:K02182	-	-	-	-	ko00000,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_1685875_10	1121861.KB899911_gene1270	1.928e-27	117.0	COG1846@1|root,COG1846@2|Bacteria,1N0MG@1224|Proteobacteria,2UDDI@28211|Alphaproteobacteria,2JTF7@204441|Rhodospirillales	204441|Rhodospirillales	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SX1_k127_1685875_7	1297865.APJD01000026_gene2512	1.189e-162	512.0	COG0778@1|root,COG0778@2|Bacteria,1Q7UM@1224|Proteobacteria,2VDZM@28211|Alphaproteobacteria,3JX3R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Nitroreductase family	-	-	-	-	-	-	-	-	-	-	-	-	Nitroreductase
SX1_k127_1685875_5	1297865.APJD01000026_gene2511	8.064e-178	560.0	COG1235@1|root,COG1235@2|Bacteria,1MVJH@1224|Proteobacteria,2TQQN@28211|Alphaproteobacteria,3JRCY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Beta-lactamase superfamily domain	phnP	-	3.1.4.55	ko:K06167	ko00440,map00440	-	R10205	RC00296	ko00000,ko00001,ko01000	-	-	-	Lactamase_B_2
SX1_k127_1685875_6	1297865.APJD01000026_gene2510	7.472e-170	536.0	COG0084@1|root,COG0084@2|Bacteria,1MUC0@1224|Proteobacteria,2TS88@28211|Alphaproteobacteria,3JTFT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	TatD related DNase	MA20_29410	-	-	ko:K03424	-	-	-	-	ko00000,ko01000	-	-	-	TatD_DNase
SX1_k127_1685875_0	1297865.APJD01000026_gene2509	0.0	1287.0	COG0143@1|root,COG0143@2|Bacteria,1MUBY@1224|Proteobacteria,2TQKA@28211|Alphaproteobacteria,3JS60@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation	metG	-	6.1.1.10	ko:K01874	ko00450,ko00970,map00450,map00970	M00359,M00360	R03659,R04773	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,tRNA-synt_1g
SX1_k127_1685875_4	1297865.APJD01000026_gene2508	5.609e-218	679.0	COG0470@1|root,COG0470@2|Bacteria,1MY1W@1224|Proteobacteria,2TV3E@28211|Alphaproteobacteria,3JRBI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DNA polymerase III delta prime subunit	holB	-	2.7.7.7	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta2
SX1_k127_1685875_8	1297865.APJD01000026_gene2507	1.242e-141	454.0	COG0125@1|root,COG0125@2|Bacteria,1MV9C@1224|Proteobacteria,2U72D@28211|Alphaproteobacteria,3JQP0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis	tmk	GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.7.4.9	ko:K00943	ko00240,ko01100,map00240,map01100	M00053	R02094,R02098	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	Thymidylate_kin
SX1_k127_1685875_3	1297865.APJD01000026_gene2506	3.099e-270	834.0	COG1686@1|root,COG1686@2|Bacteria,1MUU7@1224|Proteobacteria,2TS1P@28211|Alphaproteobacteria,3JSWY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the peptidase S11 family	dacC	-	3.4.16.4	ko:K07258	ko00550,ko01100,map00550,map01100	-	-	-	ko00000,ko00001,ko01000,ko01002,ko01011	-	-	-	PBP5_C,Peptidase_S11
SX1_k127_1685875_9	1297865.APJD01000026_gene2505	3.755e-61	212.0	COG0596@1|root,COG0596@2|Bacteria,1N5ZI@1224|Proteobacteria,2TS7X@28211|Alphaproteobacteria,3JQMA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Serine aminopeptidase, S33	MA20_29380	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
SX1_k127_1686108_1	754477.Q7C_1790	4.233e-34	134.0	COG5009@1|root,COG5009@2|Bacteria,1MU5A@1224|Proteobacteria,1RM7J@1236|Gammaproteobacteria,45ZWK@72273|Thiotrichales	72273|Thiotrichales	M	TIGRFAM penicillin-binding protein, 1A	-	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	PCB_OB,Transgly,Transpeptidase
SX1_k127_1686108_0	1122604.JONR01000010_gene3934	4.866e-95	319.0	COG4972@1|root,COG4972@2|Bacteria,1MX8P@1224|Proteobacteria,1RN8S@1236|Gammaproteobacteria,1X3US@135614|Xanthomonadales	135614|Xanthomonadales	NU	Pilus assembly protein	pilM	-	-	ko:K02662	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	PilM_2
SX1_k127_1686451_0	1297865.APJD01000011_gene6558	1.386e-232	719.0	COG4307@1|root,COG4307@2|Bacteria,1MXES@1224|Proteobacteria,2U06R@28211|Alphaproteobacteria,3JRXQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative zinc-binding metallo-peptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_Mx
SX1_k127_1686451_2	1297865.APJD01000011_gene6559	2.904e-222	694.0	COG1181@1|root,COG1181@2|Bacteria,1N4F5@1224|Proteobacteria,2U1M9@28211|Alphaproteobacteria,3JWED@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the D-alanine--D-alanine ligase family	-	-	6.3.2.4	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	-	R01150	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Dala_Dala_lig_C,Methyltransf_25
SX1_k127_1686451_9	1230476.C207_05931	1.374e-29	120.0	2BK5P@1|root,32EJA@2|Bacteria,1P0PC@1224|Proteobacteria,2UVH5@28211|Alphaproteobacteria,3K4NV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1686451_8	1297865.APJD01000011_gene6560	3.398e-41	152.0	2BGVV@1|root,32AVN@2|Bacteria,1P3P5@1224|Proteobacteria,2UVSQ@28211|Alphaproteobacteria,3K4S7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1686451_11	398525.KB900701_gene1048	3.437e-19	88.0	2AB6R@1|root,310M2@2|Bacteria,1P6EW@1224|Proteobacteria,2UWD6@28211|Alphaproteobacteria,3K56Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1686451_10	1297865.APJD01000011_gene6561	2.264e-19	88.0	2BMTS@1|root,32GDA@2|Bacteria,1NGYM@1224|Proteobacteria,2UKWT@28211|Alphaproteobacteria,3K230@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1686451_6	1297865.APJD01000011_gene6562	2.738e-160	505.0	COG2188@1|root,COG2188@2|Bacteria,1R4G0@1224|Proteobacteria,2U3SJ@28211|Alphaproteobacteria,3JX9W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	UTRA	-	-	-	ko:K03710	-	-	-	-	ko00000,ko03000	-	-	-	GntR,UTRA
SX1_k127_1686451_3	1297865.APJD01000011_gene6563	2.17e-209	651.0	COG0673@1|root,COG0673@2|Bacteria,1MU8F@1224|Proteobacteria,2U12U@28211|Alphaproteobacteria,3JX1N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
SX1_k127_1686451_5	1297865.APJD01000011_gene6564	1.478e-173	548.0	COG2084@1|root,COG2084@2|Bacteria,1R7WF@1224|Proteobacteria,2U3AW@28211|Alphaproteobacteria,3JS3Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	NAD_binding_11,NAD_binding_2
SX1_k127_1686451_4	1297865.APJD01000011_gene6565	1.749e-197	617.0	COG3181@1|root,COG3181@2|Bacteria,1MYJX@1224|Proteobacteria,2U07W@28211|Alphaproteobacteria,3JR3F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter family receptor	-	-	-	-	-	-	-	-	-	-	-	-	TctC
SX1_k127_1686451_7	1297865.APJD01000011_gene6566	4.358e-76	256.0	COG0599@1|root,COG0599@2|Bacteria,1RAV9@1224|Proteobacteria,2U5V1@28211|Alphaproteobacteria,3JYGT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Carboxymuconolactone decarboxylase family	-	-	-	-	-	-	-	-	-	-	-	-	CMD
SX1_k127_1686451_1	1297865.APJD01000011_gene6567	2.293e-226	703.0	COG0015@1|root,COG0015@2|Bacteria,1MXNN@1224|Proteobacteria,2TRCE@28211|Alphaproteobacteria,3JT32@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Adenylosuccinate lyase C-terminus	MA20_19490	-	5.5.1.2	ko:K01857	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	-	R03307	RC00902	ko00000,ko00001,ko01000	-	-	-	ADSL_C,Lyase_1
SX1_k127_1687961_0	391600.ABRU01000040_gene1726	3.038e-87	293.0	COG2986@1|root,COG2986@2|Bacteria,1MU6K@1224|Proteobacteria,2TSPJ@28211|Alphaproteobacteria,2KF5U@204458|Caulobacterales	204458|Caulobacterales	E	Catalyzes the degradation of histidine to urocanate and ammmonia	hutH	-	4.3.1.3	ko:K01745	ko00340,ko01100,map00340,map01100	M00045	R01168	RC00361	ko00000,ko00001,ko00002,ko01000	-	-	-	Lyase_aromatic
SX1_k127_1687961_1	392499.Swit_3224	2.288e-42	164.0	28H8Z@1|root,2Z7KS@2|Bacteria,1MW9T@1224|Proteobacteria,2U5RX@28211|Alphaproteobacteria,2K5KG@204457|Sphingomonadales	204457|Sphingomonadales	S	Yip1 domain	-	-	-	-	-	-	-	-	-	-	-	-	Yip1
SX1_k127_1690990_2	1297865.APJD01000015_gene3435	2.556e-75	265.0	COG3474@1|root,COG3474@2|Bacteria,1N15D@1224|Proteobacteria,2UCF5@28211|Alphaproteobacteria,3JY0H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome c	-	-	-	ko:K08738	ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	3.D.4.6	-	-	Cytochrom_C
SX1_k127_1690990_1	1297865.APJD01000015_gene3434	6.152e-163	515.0	2EBAQ@1|root,30TPG@2|Bacteria,1MXDU@1224|Proteobacteria,2U4SN@28211|Alphaproteobacteria,3JWVI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative MetA-pathway of phenol degradation	-	-	-	-	-	-	-	-	-	-	-	-	Phenol_MetA_deg
SX1_k127_1690990_0	1297865.APJD01000015_gene3433	1.755e-194	607.0	COG0477@1|root,COG0477@2|Bacteria,1MU46@1224|Proteobacteria,2TQVP@28211|Alphaproteobacteria,3JRPG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	MA20_40020	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
SX1_k127_1694806_5	1297865.APJD01000001_gene5821	1.454e-149	475.0	COG0664@1|root,COG0664@2|Bacteria,1RAT0@1224|Proteobacteria,2VFE4@28211|Alphaproteobacteria,3JXE6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Crp-like helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,cNMP_binding
SX1_k127_1694806_7	1297865.APJD01000001_gene5820	5.493e-107	348.0	COG3832@1|root,COG3832@2|Bacteria,1RD9A@1224|Proteobacteria,2U76G@28211|Alphaproteobacteria,3JT7B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Polyketide cyclase / dehydrase and lipid transport	-	-	-	-	-	-	-	-	-	-	-	-	Polyketide_cyc2
SX1_k127_1694806_2	1297865.APJD01000001_gene5819	7.257e-190	606.0	COG3391@1|root,COG3391@2|Bacteria,1MXJJ@1224|Proteobacteria,2TTH6@28211|Alphaproteobacteria,3JUP4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Cytochrome D1 heme domain	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_D1,Lactonase,NHL
SX1_k127_1694806_10	1297865.APJD01000001_gene5818	2.595e-76	257.0	COG2764@1|root,COG2764@2|Bacteria	2|Bacteria	E	glyoxalase bleomycin resistance protein dioxygenase	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
SX1_k127_1694806_0	1297865.APJD01000026_gene2387	0.0	1995.0	COG0178@1|root,COG0178@2|Bacteria,1MW0W@1224|Proteobacteria,2TQK9@28211|Alphaproteobacteria,3JTF6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate	uvrA	-	-	ko:K03701	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	ABC_tran
SX1_k127_1694806_6	1297865.APJD01000026_gene2388	1.436e-129	416.0	COG3637@1|root,COG3637@2|Bacteria,1NJWW@1224|Proteobacteria,2UD8G@28211|Alphaproteobacteria,3JWFZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Outer membrane protein beta-barrel domain	-	-	-	ko:K16079	-	-	-	-	ko00000,ko02000	1.B.4.2.1	-	-	OMP_b-brl
SX1_k127_1694806_4	1297865.APJD01000026_gene2389	6.521e-159	503.0	COG3637@1|root,COG3637@2|Bacteria,1MV2H@1224|Proteobacteria,2TTV4@28211|Alphaproteobacteria,3JT5Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K16079	-	-	-	-	ko00000,ko02000	1.B.4.2.1	-	-	OMP_b-brl
SX1_k127_1694806_3	1297865.APJD01000026_gene2390	6.001e-164	517.0	COG3637@1|root,COG3637@2|Bacteria,1MWEG@1224|Proteobacteria,2TSCB@28211|Alphaproteobacteria,3JTF0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K16079	-	-	-	-	ko00000,ko02000	1.B.4.2.1	-	-	OMP_b-brl
SX1_k127_1694806_8	1297865.APJD01000026_gene2391	5.675e-100	329.0	COG0629@1|root,COG0629@2|Bacteria,1RCWT@1224|Proteobacteria,2U5BZ@28211|Alphaproteobacteria,3JRSD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	ssb	GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496	-	ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440	-	-	-	ko00000,ko00001,ko03029,ko03032,ko03400	-	-	-	SSB
SX1_k127_1694806_9	1297865.APJD01000026_gene2392	4.854e-78	261.0	COG5395@1|root,COG5395@2|Bacteria,1N0CF@1224|Proteobacteria,2UC5R@28211|Alphaproteobacteria,3JYQZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Predicted membrane protein (DUF2306)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2306
SX1_k127_1694806_1	1230476.C207_01501	9.956e-225	698.0	COG0188@1|root,COG0188@2|Bacteria,1MUGG@1224|Proteobacteria,2TSPQ@28211|Alphaproteobacteria,3JSSS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	gyrA	-	5.99.1.3	ko:K02469	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	DNA_gyraseA_C,DNA_topoisoIV
SX1_k127_1697906_1	1297865.APJD01000014_gene816	0.0	1021.0	COG1982@1|root,COG1982@2|Bacteria,1MWK4@1224|Proteobacteria,2TSSN@28211|Alphaproteobacteria,3JT6F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Orn/Lys/Arg decarboxylase, N-terminal domain	MA20_14975	-	4.1.1.17	ko:K01581	ko00330,ko00480,ko01100,ko01110,ko01130,map00330,map00480,map01100,map01110,map01130	M00134	R00670	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	OKR_DC_1,OKR_DC_1_C,OKR_DC_1_N
SX1_k127_1697906_5	1297865.APJD01000014_gene817	1.874e-120	387.0	COG1247@1|root,COG1247@2|Bacteria,1MYQB@1224|Proteobacteria,2TTJM@28211|Alphaproteobacteria,3JUNC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Acetyltransferase (GNAT) domain	MA20_14980	-	2.3.1.183	ko:K03823	ko00440,ko01130,map00440,map01130	-	R08871,R08938	RC00004,RC00064	ko00000,ko00001,ko01000	-	-	-	Acetyltransf_4
SX1_k127_1697906_8	398525.KB900701_gene5853	8.598e-46	166.0	COG3360@1|root,COG3360@2|Bacteria,1N6UT@1224|Proteobacteria,2UFCS@28211|Alphaproteobacteria,3K077@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Dodecin	-	-	-	ko:K09165	-	-	-	-	ko00000	-	-	-	Dodecin
SX1_k127_1697906_6	1297865.APJD01000014_gene819	4.977e-111	360.0	COG3247@1|root,COG3247@2|Bacteria,1RFIH@1224|Proteobacteria,2U5WE@28211|Alphaproteobacteria,3JTES@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Short repeat of unknown function (DUF308)	-	-	-	-	-	-	-	-	-	-	-	-	DUF308
SX1_k127_1697906_4	1297865.APJD01000014_gene820	1.553e-147	468.0	2C2X7@1|root,31WBU@2|Bacteria,1R3G2@1224|Proteobacteria,2U02F@28211|Alphaproteobacteria,3K725@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF4239)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4239
SX1_k127_1697906_2	1297865.APJD01000014_gene821	6.457e-201	627.0	COG2423@1|root,COG2423@2|Bacteria,1MWH6@1224|Proteobacteria,2TSR9@28211|Alphaproteobacteria,3JWXU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Ornithine cyclodeaminase/mu-crystallin family	-	-	4.3.1.12	ko:K01750	ko00330,ko01110,ko01130,ko01230,map00330,map01110,map01130,map01230	-	R00671	RC00354	ko00000,ko00001,ko01000	-	-	-	OCD_Mu_crystall
SX1_k127_1697906_3	1297865.APJD01000014_gene822	7.701e-201	627.0	COG1072@1|root,COG1072@2|Bacteria,1MV3M@1224|Proteobacteria,2TS7E@28211|Alphaproteobacteria,3JUEA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Phosphoribulokinase / Uridine kinase family	coaA	-	2.7.1.33	ko:K00867	ko00770,ko01100,map00770,map01100	M00120	R02971,R03018,R04391	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	PRK
SX1_k127_1697906_0	1297865.APJD01000014_gene823	0.0	1527.0	COG1529@1|root,COG1529@2|Bacteria,1MUEA@1224|Proteobacteria,2TWGU@28211|Alphaproteobacteria,3JQT8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	aldehyde oxidase and xanthine dehydrogenase, a b hammerhead	-	-	-	-	-	-	-	-	-	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2,Fer2,Fer2_2
SX1_k127_1697906_7	1297865.APJD01000014_gene824	5.183e-102	332.0	COG2080@1|root,COG2080@2|Bacteria,1RB3F@1224|Proteobacteria,2VF0C@28211|Alphaproteobacteria,3JW4Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	[2Fe-2S] binding domain	-	-	1.2.5.3	ko:K03518	-	-	R11168	RC02800	ko00000,ko01000	-	-	-	Fer2,Fer2_2
SX1_k127_1697906_9	172088.AUGA01000009_gene1610	3.385e-26	108.0	COG1319@1|root,COG1319@2|Bacteria,1RCRH@1224|Proteobacteria,2TU08@28211|Alphaproteobacteria,3JSJE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CO dehydrogenase flavoprotein C-terminal domain	xdhB	-	1.2.5.3	ko:K03519	-	-	R11168	RC02800	ko00000,ko01000	-	-	-	CO_deh_flav_C,FAD_binding_5
SX1_k127_1706887_0	1297865.APJD01000035_gene5490	2.316e-284	878.0	COG0683@1|root,COG0683@2|Bacteria,1Q1P3@1224|Proteobacteria,2TUJG@28211|Alphaproteobacteria,3JUDI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	MA20_02635	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6,TAT_signal
SX1_k127_1706887_1	224911.27354970	6.55e-07	53.0	COG2897@1|root,COG2897@2|Bacteria,1MW4B@1224|Proteobacteria,2TR9R@28211|Alphaproteobacteria,3JT1H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rhodanese Homology Domain	sseA	-	2.8.1.1,2.8.1.2	ko:K01011	ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122	-	R01931,R03105,R03106	RC00214	ko00000,ko00001,ko01000	-	-	-	Rhodanese
SX1_k127_1709141_7	1297865.APJD01000007_gene1824	1.199e-98	323.0	COG1802@1|root,COG1802@2|Bacteria,1R7M7@1224|Proteobacteria,2U8RF@28211|Alphaproteobacteria,3K60K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FCD	-	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SX1_k127_1709141_0	1297865.APJD01000007_gene1825	0.0	1116.0	COG2303@1|root,COG2303@2|Bacteria,1MV19@1224|Proteobacteria,2TQKQ@28211|Alphaproteobacteria,3JSS3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	GMC oxidoreductase	MA20_44990	-	1.1.99.1	ko:K00108	ko00260,ko01100,map00260,map01100	M00555	R01025	RC00087	ko00000,ko00001,ko00002,ko01000	-	-	-	GMC_oxred_C,GMC_oxred_N
SX1_k127_1709141_6	1297865.APJD01000007_gene1826	5.653e-115	379.0	COG2186@1|root,COG2186@2|Bacteria,1NS1A@1224|Proteobacteria,2UNUD@28211|Alphaproteobacteria,3K2TZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FCD	-	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SX1_k127_1709141_9	1297865.APJD01000007_gene1827	3.703e-30	119.0	COG1028@1|root,COG1028@2|Bacteria,1MXVZ@1224|Proteobacteria,2U2P1@28211|Alphaproteobacteria,3JXHK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	-	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
SX1_k127_1709141_5	1297865.APJD01000007_gene1827	5.475e-120	386.0	COG1028@1|root,COG1028@2|Bacteria,1MXVZ@1224|Proteobacteria,2U2P1@28211|Alphaproteobacteria,3JXHK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	-	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
SX1_k127_1709141_1	1297865.APJD01000007_gene1828	0.0	1059.0	COG0318@1|root,COG0318@2|Bacteria,1MUIC@1224|Proteobacteria,2TRRZ@28211|Alphaproteobacteria,3JX1V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	-	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
SX1_k127_1709141_4	1297865.APJD01000007_gene1829	1.334e-191	603.0	COG3181@1|root,COG3181@2|Bacteria,1NRAQ@1224|Proteobacteria,2UNTB@28211|Alphaproteobacteria,3K3IT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter family receptor	-	-	-	-	-	-	-	-	-	-	-	-	TctC
SX1_k127_1709141_3	1297865.APJD01000007_gene1830	3.283e-231	715.0	COG0407@1|root,COG0407@2|Bacteria,1MUG1@1224|Proteobacteria,2TQQV@28211|Alphaproteobacteria,3JUYS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III	hemE	-	4.1.1.37	ko:K01599	ko00860,ko01100,ko01110,map00860,map01100,map01110	M00121	R03197,R04972	RC00872	ko00000,ko00001,ko00002,ko01000	-	-	-	URO-D
SX1_k127_1709141_8	1297865.APJD01000007_gene1831	9.744e-33	128.0	2DHFT@1|root,2ZZKE@2|Bacteria,1N0RZ@1224|Proteobacteria,2UCEH@28211|Alphaproteobacteria,3K0Y8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1709141_2	1297865.APJD01000007_gene1832	7.804e-250	773.0	COG4655@1|root,COG4655@2|Bacteria,1R41B@1224|Proteobacteria,2TVD0@28211|Alphaproteobacteria,3JSXT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative Tad-like Flp pilus-assembly	-	-	-	-	-	-	-	-	-	-	-	-	Tad,Tad_C
SX1_k127_1713078_3	1230476.C207_04425	1.308e-140	449.0	COG1282@1|root,COG1282@2|Bacteria,1MUP4@1224|Proteobacteria,2TQN1@28211|Alphaproteobacteria,3JTA7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane	pntB	GO:0008150,GO:0008152,GO:0055114	1.6.1.2	ko:K00325	ko00760,ko01100,map00760,map01100	-	R00112	RC00001	ko00000,ko00001,ko01000	-	-	-	PNTB
SX1_k127_1713078_5	1297865.APJD01000079_gene2636	9.674e-56	200.0	COG3288@1|root,COG3288@2|Bacteria,1MZ3E@1224|Proteobacteria,2UBXS@28211|Alphaproteobacteria,3JYY1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	4TM region of pyridine nucleotide transhydrogenase, mitoch	pntAB	GO:0008150,GO:0008152,GO:0055114	1.6.1.2	ko:K00324	ko00760,ko01100,map00760,map01100	-	R00112	RC00001	ko00000,ko00001,ko01000	-	-	-	PNTB_4TM
SX1_k127_1713078_0	398525.KB900701_gene335	1.94e-222	691.0	COG3288@1|root,COG3288@2|Bacteria,1MVXU@1224|Proteobacteria,2TSZN@28211|Alphaproteobacteria,3JU1M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Alanine dehydrogenase/PNT, C-terminal domain	pntAA	GO:0000166,GO:0003674,GO:0003824,GO:0003957,GO:0005215,GO:0005488,GO:0005515,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006740,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0008746,GO:0008750,GO:0009117,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015672,GO:0016491,GO:0016651,GO:0016652,GO:0019362,GO:0019637,GO:0022857,GO:0022890,GO:0034220,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046496,GO:0046983,GO:0048037,GO:0050662,GO:0051179,GO:0051186,GO:0051234,GO:0051287,GO:0055085,GO:0055086,GO:0055114,GO:0070403,GO:0070404,GO:0071704,GO:0072524,GO:0097159,GO:0098655,GO:0098660,GO:0098662,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1902600	1.6.1.2	ko:K00324	ko00760,ko01100,map00760,map01100	-	R00112	RC00001	ko00000,ko00001,ko01000	-	-	-	AlaDh_PNT_C,AlaDh_PNT_N
SX1_k127_1713078_4	1380355.JNIJ01000031_gene3472	4.185e-106	348.0	COG0410@1|root,COG0410@2|Bacteria,1MVVC@1224|Proteobacteria,2TR61@28211|Alphaproteobacteria,3JQRS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ATPases associated with a variety of cellular activities	livF	-	-	ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran
SX1_k127_1713078_2	1297865.APJD01000052_gene1189	2.529e-161	528.0	COG0411@1|root,COG0411@2|Bacteria,1MUTY@1224|Proteobacteria,2TQK1@28211|Alphaproteobacteria,3JVWU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid ATP-binding cassette transporter	livG	-	-	ko:K01995	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_1713078_1	1297865.APJD01000052_gene1190	3.08e-214	670.0	COG4177@1|root,COG4177@2|Bacteria,1MXPG@1224|Proteobacteria,2TUH2@28211|Alphaproteobacteria,3JWPR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	-	-	-	ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_1713078_6	1297865.APJD01000052_gene1191	1.318e-35	135.0	COG0559@1|root,COG0559@2|Bacteria,1QDNH@1224|Proteobacteria,2U1CJ@28211|Alphaproteobacteria,3JRUY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	-	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_1717822_2	1230476.C207_00510	8.495e-134	431.0	COG1319@1|root,COG1319@2|Bacteria,1RCRH@1224|Proteobacteria,2TU08@28211|Alphaproteobacteria,3JSJE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CO dehydrogenase flavoprotein C-terminal domain	xdhB	-	1.2.5.3	ko:K03519	-	-	R11168	RC02800	ko00000,ko01000	-	-	-	CO_deh_flav_C,FAD_binding_5
SX1_k127_1717822_1	1297865.APJD01000014_gene826	0.0	1015.0	2BKHB@1|root,32EYB@2|Bacteria,1MYVD@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1717822_0	1297865.APJD01000014_gene827	0.0	1021.0	COG0747@1|root,COG0747@2|Bacteria,1MWBH@1224|Proteobacteria,2TTF4@28211|Alphaproteobacteria,3JVS3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Bacterial extracellular solute-binding proteins, family 5 Middle	-	-	-	ko:K02035	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	SBP_bac_5
SX1_k127_1720664_2	1297865.APJD01000010_gene5108	2.097e-40	151.0	2A722@1|root,30VXF@2|Bacteria,1N21K@1224|Proteobacteria,2UDTP@28211|Alphaproteobacteria,3K06K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1720664_1	1297865.APJD01000010_gene5107	7.503e-108	352.0	COG3045@1|root,COG3045@2|Bacteria,1RDMP@1224|Proteobacteria,2U72F@28211|Alphaproteobacteria,3JSEB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	CreA protein	creA	-	-	ko:K05805	-	-	-	-	ko00000	-	-	-	CreA
SX1_k127_1720664_0	1297865.APJD01000010_gene5106	8e-323	994.0	COG1376@1|root,COG1376@2|Bacteria,1Q823@1224|Proteobacteria,2TV64@28211|Alphaproteobacteria,3JR6Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	ErfK YbiS YcfS YnhG family protein	-	-	-	-	-	-	-	-	-	-	-	-	PG_binding_1,YkuD
SX1_k127_1722386_0	1297865.APJD01000020_gene55	0.0	1413.0	COG4773@1|root,COG4773@2|Bacteria,1QTT0@1224|Proteobacteria,2TQSQ@28211|Alphaproteobacteria,3JQP4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SX1_k127_1722386_4	1297865.APJD01000020_gene54	2.583e-141	451.0	COG2375@1|root,COG2375@2|Bacteria,1QMP4@1224|Proteobacteria,2TVPF@28211|Alphaproteobacteria,3JTHP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Siderophore-interacting FAD-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_9,SIP
SX1_k127_1722386_3	1297865.APJD01000020_gene53	1.253e-147	467.0	COG4122@1|root,COG4122@2|Bacteria,1R54R@1224|Proteobacteria,2U3D0@28211|Alphaproteobacteria,3JSTV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	O-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_24
SX1_k127_1722386_2	1297865.APJD01000020_gene52	2.702e-175	551.0	COG2207@1|root,COG2207@2|Bacteria,1NETZ@1224|Proteobacteria,2TU4R@28211|Alphaproteobacteria,3JR9J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,HTH_18
SX1_k127_1722386_1	1297865.APJD01000020_gene51	1.297e-314	966.0	COG3333@1|root,COG3333@2|Bacteria,1MUKR@1224|Proteobacteria,2TR4Q@28211|Alphaproteobacteria,3JRAZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter TctA family	MA20_15045	-	-	ko:K07793	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.80.1	-	-	TctA
SX1_k127_1722386_5	1297865.APJD01000020_gene50	3.287e-67	229.0	2C846@1|root,32T61@2|Bacteria,1RCJG@1224|Proteobacteria,2U6NF@28211|Alphaproteobacteria,3JYC8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter TctB family	-	-	-	ko:K07794	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.80.1	-	-	TctB
SX1_k127_1723606_2	1297865.APJD01000005_gene3768	2.684e-210	655.0	COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,1MVI9@1224|Proteobacteria,2TT1Y@28211|Alphaproteobacteria,3JRJB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K16554	ko05111,map05111	-	-	-	ko00000,ko00001,ko02000	8.A.3.1	-	-	AAA_31,GNVR,Wzz
SX1_k127_1723606_0	1297865.APJD01000005_gene3767	3.635e-244	757.0	COG1596@1|root,COG1596@2|Bacteria,1N7GP@1224|Proteobacteria,2TS5Q@28211|Alphaproteobacteria,3JVK9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	pssN	-	-	ko:K01991	ko02026,map02026	-	-	-	ko00000,ko00001,ko02000	1.B.18	-	-	Poly_export,SLBB
SX1_k127_1723606_3	1297865.APJD01000005_gene3766	5.558e-61	211.0	2AGQ5@1|root,316XV@2|Bacteria,1NIP3@1224|Proteobacteria,2UM87@28211|Alphaproteobacteria,3K1T3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1723606_5	172088.AUGA01000026_gene352	5.389e-20	94.0	29FQA@1|root,302MX@2|Bacteria,1NDMU@1224|Proteobacteria,2UIGC@28211|Alphaproteobacteria,3K1N0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1723606_1	1297865.APJD01000005_gene3765	7.481e-237	737.0	28J33@1|root,2Z8ZD@2|Bacteria,1R6CT@1224|Proteobacteria,2TTBV@28211|Alphaproteobacteria,3JWX1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1723606_4	1297865.APJD01000005_gene3764	2.807e-46	168.0	COG0639@1|root,COG0639@2|Bacteria,1RD8M@1224|Proteobacteria,2U7N2@28211|Alphaproteobacteria,3JWKP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Calcineurin-like phosphoesterase	prp1	-	3.1.3.16	ko:K07313	-	-	-	-	ko00000,ko01000	-	-	-	Metallophos
SX1_k127_1745256_8	1297865.APJD01000008_gene5615	1.976e-63	218.0	COG1868@1|root,COG1868@2|Bacteria,1MX01@1224|Proteobacteria,2TR4F@28211|Alphaproteobacteria,3JRPA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation	fliM	-	-	ko:K02416	ko02030,ko02040,map02030,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FliM,FliMN_C
SX1_k127_1745256_5	1297865.APJD01000008_gene5616	1.236e-98	322.0	COG1580@1|root,COG1580@2|Bacteria,1RH5D@1224|Proteobacteria,2U9BF@28211|Alphaproteobacteria,3JSJ4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Controls the rotational direction of flagella during chemotaxis	fliL	-	-	ko:K02415	-	-	-	-	ko00000,ko02035	-	-	-	FliL
SX1_k127_1745256_2	1297865.APJD01000008_gene5617	1.929e-160	507.0	COG4786@1|root,COG4786@2|Bacteria,1PZ24@1224|Proteobacteria,2U06G@28211|Alphaproteobacteria,3JR0D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Belongs to the flagella basal body rod proteins family	flgF	-	-	ko:K02391,ko:K02392	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flg_bb_rod,Flg_bbr_C
SX1_k127_1745256_3	1297865.APJD01000008_gene5618	1.128e-159	504.0	COG4786@1|root,COG4786@2|Bacteria,1MVMA@1224|Proteobacteria,2TRR4@28211|Alphaproteobacteria,3JRIZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	flagellar basal-body rod protein FlgG	flgG	-	-	ko:K02392	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flg_bb_rod,Flg_bbr_C
SX1_k127_1745256_0	1297865.APJD01000008_gene5619	5.854e-213	664.0	COG1261@1|root,COG1261@2|Bacteria,1PM4C@1224|Proteobacteria,2TRUS@28211|Alphaproteobacteria,3JVWP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Chaperone for flagella basal body P-ring formation	flgA	-	-	ko:K02386	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	ChapFlgA
SX1_k127_1745256_4	1297865.APJD01000008_gene5620	1.231e-151	485.0	COG2063@1|root,COG2063@2|Bacteria,1RDEY@1224|Proteobacteria,2TRHN@28211|Alphaproteobacteria,3JQVQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation	flgH	-	-	ko:K02393	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FlgH
SX1_k127_1745256_6	1297865.APJD01000008_gene5621	5.293e-94	308.0	2ER0Q@1|root,33IK9@2|Bacteria,1RJ0D@1224|Proteobacteria,2U7E0@28211|Alphaproteobacteria,3JZ3G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	T3SS negative regulator,GrlR	-	-	-	-	-	-	-	-	-	-	-	-	GrlR
SX1_k127_1745256_9	1230476.C207_00777	3.027e-55	195.0	296W3@1|root,2ZU4W@2|Bacteria,1RGY5@1224|Proteobacteria,2U96A@28211|Alphaproteobacteria,3JZCE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1745256_1	1297865.APJD01000062_gene3378	2.052e-164	524.0	COG0671@1|root,COG0671@2|Bacteria,1RKIU@1224|Proteobacteria,2UBF9@28211|Alphaproteobacteria,3JZM9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	PAP2 superfamily	-	-	-	-	-	-	-	-	-	-	-	-	PAP2_3
SX1_k127_1745256_7	1297865.APJD01000062_gene3377	6.032e-84	278.0	COG1247@1|root,COG1247@2|Bacteria,1RCMW@1224|Proteobacteria,2U631@28211|Alphaproteobacteria,3JYH9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1750083_2	1297865.APJD01000036_gene1496	4.093e-67	229.0	COG3153@1|root,COG3153@2|Bacteria,1RD0C@1224|Proteobacteria,2U7AS@28211|Alphaproteobacteria,3JY5B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Acetyltransferase (GNAT) domain	MA20_06530	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_9
SX1_k127_1750083_0	1297865.APJD01000036_gene1497	1.737e-252	781.0	COG0019@1|root,COG0019@2|Bacteria,1MZ7Y@1224|Proteobacteria,2TSKB@28211|Alphaproteobacteria,3JRBN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the Orn Lys Arg decarboxylase class-II family	speF	-	4.1.1.17	ko:K01581	ko00330,ko00480,ko01100,ko01110,ko01130,map00330,map00480,map01100,map01110,map01130	M00134	R00670	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Orn_Arg_deC_N,Orn_DAP_Arg_deC
SX1_k127_1750083_3	1297865.APJD01000036_gene1498	1.307e-44	169.0	2EMGS@1|root,33F5F@2|Bacteria,1N1UH@1224|Proteobacteria,2UC3W@28211|Alphaproteobacteria,3K03S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_06520	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1750083_1	1297865.APJD01000036_gene1499	8.139e-107	349.0	COG0339@1|root,COG0339@2|Bacteria,1MU1K@1224|Proteobacteria,2TRCK@28211|Alphaproteobacteria,3JSDU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Peptidase family M3	dcp	GO:0003674,GO:0003824,GO:0004180,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0016787,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564	3.4.15.5	ko:K01284	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M3
SX1_k127_1758826_1	1297865.APJD01000010_gene4881	2.389e-147	467.0	COG2207@1|root,COG2207@2|Bacteria,1MY46@1224|Proteobacteria,2TUHY@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_6,HTH_18
SX1_k127_1758826_0	1297865.APJD01000010_gene4882	0.0	1073.0	COG3511@1|root,COG3511@2|Bacteria,1MVNS@1224|Proteobacteria,2U1QU@28211|Alphaproteobacteria,3JTQP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Phosphoesterase family	-	-	3.1.4.3	ko:K01114	ko00562,ko00564,ko00565,ko01100,ko01110,ko02024,ko04919,map00562,map00564,map00565,map01100,map01110,map02024,map04919	-	R01312,R02027,R02052,R03332,R07381	RC00017,RC00425	ko00000,ko00001,ko01000,ko02042	-	-	-	Phosphoesterase
SX1_k127_1770647_10	1297865.APJD01000024_gene430	6.371e-23	97.0	COG0835@1|root,COG0835@2|Bacteria,1RAH1@1224|Proteobacteria,2U59Y@28211|Alphaproteobacteria,3JYAB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NT	Two component signalling adaptor domain	cheW	-	-	ko:K03408	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	CheW
SX1_k127_1770647_7	398525.KB900701_gene7024	1.77e-73	247.0	COG2199@1|root,COG3706@2|Bacteria,1RH2K@1224|Proteobacteria,2U9EP@28211|Alphaproteobacteria,3JY1Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Response regulator receiver domain	cheY	-	-	ko:K03413	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko02022,ko02035	-	-	-	Response_reg
SX1_k127_1770647_3	1297865.APJD01000024_gene428	1.314e-231	720.0	COG2201@1|root,COG2201@2|Bacteria,1MWCN@1224|Proteobacteria,2TSGV@28211|Alphaproteobacteria,3JT3I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NT	catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR	cheB	-	3.1.1.61,3.5.1.44	ko:K03412	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	CheB_methylest,Response_reg
SX1_k127_1770647_4	1297865.APJD01000024_gene427	1.79e-181	576.0	COG1352@1|root,COG1352@2|Bacteria,1MU6W@1224|Proteobacteria,2TRQ3@28211|Alphaproteobacteria,3JTPM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NT	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP	MA20_09645	-	2.1.1.80	ko:K00575	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko01000,ko02035	-	-	-	CheR,CheR_N
SX1_k127_1770647_1	1297865.APJD01000024_gene426	8.013e-264	812.0	COG0754@1|root,COG0754@2|Bacteria,1MW6V@1224|Proteobacteria,2TU8J@28211|Alphaproteobacteria,3JUGD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glutathionylspermidine synthase preATP-grasp	MA20_09650	-	-	-	-	-	-	-	-	-	-	-	GSP_synth
SX1_k127_1770647_11	1230476.C207_06935	4.107e-21	94.0	2BSN8@1|root,32MQV@2|Bacteria,1PBCY@1224|Proteobacteria,2UYI6@28211|Alphaproteobacteria,3K5K6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1770647_8	1297865.APJD01000024_gene425	7.556e-71	241.0	29ACZ@1|root,2ZXDG@2|Bacteria,1RFSH@1224|Proteobacteria,2U8MX@28211|Alphaproteobacteria,3JYTV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1770647_6	1297865.APJD01000024_gene424	1.871e-74	251.0	COG3766@1|root,COG3766@2|Bacteria,1N14W@1224|Proteobacteria,2U5NC@28211|Alphaproteobacteria,3JY1Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of Unknown Function (DUF350)	MA20_09660	-	-	ko:K08989	-	-	-	-	ko00000	-	-	-	DUF350
SX1_k127_1770647_9	1297865.APJD01000024_gene423	3.298e-59	208.0	2AEUW@1|root,314S8@2|Bacteria,1NBDF@1224|Proteobacteria,2UIS8@28211|Alphaproteobacteria,3K1PS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1770647_2	1230476.C207_06931	1.068e-250	778.0	2DKY1@1|root,30U8F@2|Bacteria,1R73S@1224|Proteobacteria,2TYRX@28211|Alphaproteobacteria,3K711@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1770647_0	1297865.APJD01000024_gene421	0.0	1040.0	COG4934@1|root,COG4934@2|Bacteria,1R55X@1224|Proteobacteria,2U0CP@28211|Alphaproteobacteria,3JXAI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Pro-kumamolisin, activation domain	-	-	-	ko:K08677	-	-	-	-	ko00000,ko01002	-	-	-	Peptidase_S8,Pro-kuma_activ
SX1_k127_1770647_5	318996.AXAZ01000101_gene103	1.006e-148	471.0	COG0745@1|root,COG0745@2|Bacteria,1MWVI@1224|Proteobacteria,2TRSP@28211|Alphaproteobacteria,3JQKV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Transcriptional regulatory protein, C terminal	ctrA	GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141	-	ko:K02483,ko:K13584	ko02020,ko04112,map02020,map04112	M00512	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
SX1_k127_1770742_8	1297865.APJD01000021_gene3081	2.521e-24	102.0	COG0835@1|root,COG0835@2|Bacteria,1RAH1@1224|Proteobacteria,2U59Y@28211|Alphaproteobacteria,3JYAB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NT	Two component signalling adaptor domain	cheW	-	-	ko:K03408	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	CheW
SX1_k127_1770742_5	1297865.APJD01000021_gene3080	9.735e-78	261.0	COG2199@1|root,COG3706@2|Bacteria,1RH2K@1224|Proteobacteria,2U9EP@28211|Alphaproteobacteria,3JYDM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	cheY-homologous receiver domain	cheY	-	-	ko:K03413	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko02022,ko02035	-	-	-	Response_reg
SX1_k127_1770742_2	1297865.APJD01000021_gene3079	2.039e-184	580.0	COG1352@1|root,COG1352@2|Bacteria,1MU6W@1224|Proteobacteria,2TRQ3@28211|Alphaproteobacteria,3JTPM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NT	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP	cheR1	-	2.1.1.80	ko:K00575	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko01000,ko02035	-	-	-	CheR,CheR_N
SX1_k127_1770742_6	1297865.APJD01000021_gene3078	2.265e-61	211.0	2CBFG@1|root,30Y8R@2|Bacteria,1RI51@1224|Proteobacteria,2U7UD@28211|Alphaproteobacteria,3JZDX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_39155	-	-	-	-	-	-	-	-	-	-	-	PilZ
SX1_k127_1770742_7	1297865.APJD01000021_gene3077	1.303e-54	194.0	2AFIP@1|root,30VNR@2|Bacteria,1N1RX@1224|Proteobacteria,2VGFX@28211|Alphaproteobacteria,3K07C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1770742_4	1230476.C207_06999	1.079e-126	406.0	COG4566@1|root,COG4566@2|Bacteria,1PP24@1224|Proteobacteria,2TQN8@28211|Alphaproteobacteria,3JU3A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	helix_turn_helix, Lux Regulon	MA20_39170	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
SX1_k127_1770742_1	1230476.C207_06998	0.0	1146.0	COG0129@1|root,COG0129@2|Bacteria,1MV4I@1224|Proteobacteria,2TQRW@28211|Alphaproteobacteria,3JR3Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	Dehydratase family	MA20_39205	-	4.2.1.82,4.2.1.9	ko:K01687,ko:K22186	ko00040,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00040,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R01209,R02429,R04441,R05070	RC00468,RC00543,RC01714	ko00000,ko00001,ko00002,ko01000	-	-	-	ILVD_EDD
SX1_k127_1770742_10	224911.27354970	4.682e-05	47.0	COG2897@1|root,COG2897@2|Bacteria,1MW4B@1224|Proteobacteria,2TR9R@28211|Alphaproteobacteria,3JT1H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rhodanese Homology Domain	sseA	-	2.8.1.1,2.8.1.2	ko:K01011	ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122	-	R01931,R03105,R03106	RC00214	ko00000,ko00001,ko01000	-	-	-	Rhodanese
SX1_k127_1770742_3	1297865.APJD01000021_gene3074	1.091e-152	482.0	COG0684@1|root,COG0684@2|Bacteria,1MUWV@1224|Proteobacteria,2TU1X@28211|Alphaproteobacteria,3JTSK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Aldolase/RraA	MA20_39210	-	-	-	-	-	-	-	-	-	-	-	RraA-like
SX1_k127_1770742_9	224911.27348475	2.317e-06	53.0	COG0500@1|root,COG0500@2|Bacteria,1REJ2@1224|Proteobacteria,2U7T5@28211|Alphaproteobacteria,3JV3K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Nodulation protein S (NodS)	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25
SX1_k127_1770742_0	1297865.APJD01000021_gene3073	0.0	1442.0	COG1770@1|root,COG1770@2|Bacteria,1MUED@1224|Proteobacteria,2TTR0@28211|Alphaproteobacteria,3JRTX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Prolyl oligopeptidase, N-terminal beta-propeller domain	ptrB	GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0070011,GO:0070012,GO:0071704,GO:0140096,GO:1901564	3.4.21.83	ko:K01354	ko05142,ko05143,map05142,map05143	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S9,Peptidase_S9_N
SX1_k127_1775609_10	398525.KB900701_gene5968	9.463e-20	88.0	COG0599@1|root,COG0599@2|Bacteria,1RDSG@1224|Proteobacteria,2U72V@28211|Alphaproteobacteria,3JY3U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Carboxymuconolactone decarboxylase family	pcaC	-	4.1.1.44	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	-	R03470	RC00938	ko00000,ko00001,ko01000	-	-	-	CMD
SX1_k127_1775609_4	1297865.APJD01000014_gene936	7.222e-172	540.0	COG0596@1|root,COG0596@2|Bacteria,1QTTN@1224|Proteobacteria,2TRYE@28211|Alphaproteobacteria,3JRD7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Serine aminopeptidase, S33	MA20_09375	-	3.1.1.24	ko:K01055	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	M00568	R02991	RC00825	ko00000,ko00001,ko00002,ko01000	-	-	-	Abhydrolase_1
SX1_k127_1775609_0	1297865.APJD01000014_gene935	2.185e-266	836.0	COG0015@1|root,COG0015@2|Bacteria,1MXNN@1224|Proteobacteria,2TRCE@28211|Alphaproteobacteria,3JT32@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Adenylosuccinate lyase C-terminus	MA20_09380	-	5.5.1.2	ko:K01857	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	-	R03307	RC00902	ko00000,ko00001,ko01000	-	-	-	ADSL_C,Lyase_1
SX1_k127_1775609_8	1230476.C207_00617	5.401e-90	297.0	COG3427@1|root,COG3427@2|Bacteria,1RHUC@1224|Proteobacteria,2U9HD@28211|Alphaproteobacteria,3JTDF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Carbon monoxide dehydrogenase subunit G (CoxG)	MA20_09385	-	-	ko:K09386	-	-	-	-	ko00000	-	-	-	COXG
SX1_k127_1775609_7	189753.AXAS01000033_gene2831	2.723e-104	342.0	COG2080@1|root,COG2080@2|Bacteria,1RD8C@1224|Proteobacteria,2U5BM@28211|Alphaproteobacteria,3JRGQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	[2Fe-2S] binding domain	MA20_09390	-	1.2.5.3	ko:K03518	-	-	R11168	RC02800	ko00000,ko01000	-	-	-	Fer2,Fer2_2
SX1_k127_1775609_5	1297865.APJD01000014_gene932	2.877e-165	522.0	COG1319@1|root,COG1319@2|Bacteria,1MUDB@1224|Proteobacteria,2TRA8@28211|Alphaproteobacteria,3JQQE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CO dehydrogenase flavoprotein C-terminal domain	coxM	-	1.2.5.3	ko:K03519	-	-	R11168	RC02800	ko00000,ko01000	-	-	-	CO_deh_flav_C,FAD_binding_5
SX1_k127_1775609_2	1297865.APJD01000014_gene931	1.195e-188	591.0	COG0714@1|root,COG0714@2|Bacteria,1MV5I@1224|Proteobacteria,2TREB@28211|Alphaproteobacteria,3JTZT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	AAA domain (dynein-related subfamily)	MA20_09400	-	-	-	-	-	-	-	-	-	-	-	AAA_5
SX1_k127_1775609_1	1297865.APJD01000014_gene930	2.166e-253	783.0	COG3552@1|root,COG3552@2|Bacteria,1MUHH@1224|Proteobacteria,2TSXR@28211|Alphaproteobacteria,3JT92@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	VWA domain containing CoxE-like protein	MA20_09405	-	-	ko:K07161	-	-	-	-	ko00000	-	-	-	VWA_CoxE
SX1_k127_1775609_9	1297865.APJD01000014_gene929	5.199e-64	219.0	COG1975@1|root,COG1975@2|Bacteria,1RI4U@1224|Proteobacteria,2U9FQ@28211|Alphaproteobacteria,3JYQ5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	XdhC and CoxI family	MA20_09410	-	-	-	-	-	-	-	-	-	-	-	XdhC_CoxI
SX1_k127_1775609_6	1297865.APJD01000014_gene928	2.329e-141	453.0	COG1975@1|root,COG1975@2|Bacteria,1MXKU@1224|Proteobacteria,2TUF3@28211|Alphaproteobacteria,3JRUR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	XdhC Rossmann domain	MA20_09415	-	-	ko:K07402	-	-	-	-	ko00000	-	-	-	XdhC_C,XdhC_CoxI
SX1_k127_1775609_3	1297865.APJD01000014_gene927	1.045e-185	584.0	COG2068@1|root,COG2068@2|Bacteria,1MW0X@1224|Proteobacteria,2TR5D@28211|Alphaproteobacteria,3JQZ5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Probable molybdopterin binding domain	MA20_09420	-	2.7.7.76	ko:K07141	ko00790,map00790	-	R11582	-	ko00000,ko00001,ko01000	-	-	-	MoCF_biosynth,NTP_transf_3
SX1_k127_1788074_0	1297865.APJD01000012_gene1346	0.0	1277.0	COG0653@1|root,COG0653@2|Bacteria,1MUJZ@1224|Proteobacteria,2TTBF@28211|Alphaproteobacteria,3JU9H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane	secA	GO:0000166,GO:0002790,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015627,GO:0015628,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:0098776,GO:1901265,GO:1901363,GO:1904680	-	ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4	-	-	SEC-C,SecA_DEAD,SecA_PP_bind,SecA_SW
SX1_k127_1788074_3	1297865.APJD01000012_gene1345	1.021e-183	578.0	COG0760@1|root,COG0760@2|Bacteria,1MZDK@1224|Proteobacteria,2TVQD@28211|Alphaproteobacteria,3JR5Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Peptidylprolyl isomerase	ppiC	-	5.2.1.8	ko:K01802,ko:K03769	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Rotamase,Rotamase_3
SX1_k127_1788074_2	1230476.C207_07037	1.958e-247	769.0	COG1364@1|root,COG1364@2|Bacteria,1MU0T@1224|Proteobacteria,2TS98@28211|Alphaproteobacteria,3JT8Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate	argJ	GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.3.1.1,2.3.1.35	ko:K00620	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	M00028	R00259,R02282	RC00004,RC00064	ko00000,ko00001,ko00002,ko01000	-	-	-	ArgJ
SX1_k127_1788074_1	1297865.APJD01000012_gene1343	5.071e-277	856.0	COG4961@1|root,COG4961@2|Bacteria,1NN97@1224|Proteobacteria,2TS6W@28211|Alphaproteobacteria,3JVNP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Putative Flp pilus-assembly TadE/G-like	-	-	-	-	-	-	-	-	-	-	-	-	Tad
SX1_k127_1788074_5	1297865.APJD01000012_gene1342	3.571e-85	284.0	COG0494@1|root,COG0494@2|Bacteria,1RCZM@1224|Proteobacteria,2U7A4@28211|Alphaproteobacteria,3JY6Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	NUDIX domain	mutT	GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360	3.6.1.55	ko:K03574	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	Acetyltransf_3,NUDIX,NUDIX_4
SX1_k127_1788074_4	1297865.APJD01000012_gene1341	1.84e-92	304.0	COG0500@1|root,COG2226@2|Bacteria,1PA5F@1224|Proteobacteria,2TRFS@28211|Alphaproteobacteria,3JRCR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Methyltransferase domain	bioC	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_23
SX1_k127_1791468_0	1297865.APJD01000049_gene5518	4.929e-240	742.0	COG1304@1|root,COG1304@2|Bacteria,1MUEZ@1224|Proteobacteria,2TQNW@28211|Alphaproteobacteria,3JSM5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	FMN-dependent dehydrogenase	lldD	-	1.1.2.3	ko:K00101	ko00620,ko01100,map00620,map01100	-	R00196	RC00044	ko00000,ko00001,ko01000	-	-	-	FMN_dh
SX1_k127_1791468_2	1297865.APJD01000049_gene5519	1.366e-128	413.0	2B41E@1|root,31WRS@2|Bacteria,1P8VA@1224|Proteobacteria,2TT81@28211|Alphaproteobacteria,3JUBQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1791468_3	1230476.C207_06107	2.206e-121	391.0	2B41E@1|root,31WRS@2|Bacteria,1P8VA@1224|Proteobacteria,2TT81@28211|Alphaproteobacteria,3JVF8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1791468_1	1297865.APJD01000049_gene5521	1.076e-173	544.0	COG0169@1|root,COG0169@2|Bacteria,1MVH4@1224|Proteobacteria,2TS99@28211|Alphaproteobacteria,3JU3E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)	aroE	-	1.1.1.25	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R02413	RC00206	ko00000,ko00001,ko00002,ko01000	-	-	-	Shikimate_DH,Shikimate_dh_N
SX1_k127_1791795_1	1297865.APJD01000034_gene2382	3.408e-82	277.0	COG0589@1|root,COG0589@2|Bacteria,1RI97@1224|Proteobacteria,2UABJ@28211|Alphaproteobacteria,3JY3J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Belongs to the universal stress protein A family	MA20_08295	-	-	-	-	-	-	-	-	-	-	-	Usp
SX1_k127_1791795_0	1297865.APJD01000034_gene2383	2.741e-115	372.0	COG2062@1|root,COG2062@2|Bacteria,1N0FX@1224|Proteobacteria,2UBYD@28211|Alphaproteobacteria,3JSQ3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Histidine phosphatase superfamily (branch 1)	sixA	-	-	ko:K08296	-	-	-	-	ko00000,ko01000	-	-	-	His_Phos_1
SX1_k127_1791795_2	1297865.APJD01000034_gene2384	5.065e-51	181.0	COG0665@1|root,COG0665@2|Bacteria,1MVGP@1224|Proteobacteria,2TRX9@28211|Alphaproteobacteria,3JSHC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	FAD dependent oxidoreductase	MA20_08305	-	-	ko:K04755,ko:K09471	ko00330,ko01100,map00330,map01100	M00136	R07415	RC00062	ko00000,ko00001,ko00002,ko01000	-	-	-	DAO
SX1_k127_1795515_0	1297865.APJD01000002_gene4047	0.0	1664.0	COG0243@1|root,COG0243@2|Bacteria,1NS3T@1224|Proteobacteria,2TQYD@28211|Alphaproteobacteria,3JUBJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family	nasA	-	-	ko:K00372	ko00910,ko01120,map00910,map01120	M00531	R00798,R01106	RC02812	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2_BFD,Molybdop_Fe4S4,Molybdopterin,Molydop_binding
SX1_k127_1795515_4	1297865.APJD01000002_gene4048	3.406e-46	167.0	29EAS@1|root,3018S@2|Bacteria,1N6KW@1224|Proteobacteria,2UBYA@28211|Alphaproteobacteria,3K0FI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1795515_1	1297865.APJD01000002_gene4049	1.345e-273	844.0	COG1804@1|root,COG1804@2|Bacteria,1MU2K@1224|Proteobacteria,2TR7Q@28211|Alphaproteobacteria,3JSEP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA-transferase family III	MA20_31055	-	-	-	-	-	-	-	-	-	-	-	CoA_transf_3
SX1_k127_1795515_2	1297865.APJD01000002_gene4050	1.051e-150	477.0	COG3246@1|root,COG3246@2|Bacteria,1NZS9@1224|Proteobacteria,2U35R@28211|Alphaproteobacteria,3JZMF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	beta-keto acid cleavage enzyme	-	-	-	-	-	-	-	-	-	-	-	-	BKACE
SX1_k127_1795515_3	1230476.C207_01652	5.669e-80	267.0	COG0251@1|root,COG0251@2|Bacteria,1MZ0F@1224|Proteobacteria,2U5WF@28211|Alphaproteobacteria,3JYJM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Endoribonuclease L-PSP	-	-	3.5.99.10	ko:K09022	-	-	R11098,R11099	RC03275,RC03354	ko00000,ko01000	-	-	-	Ribonuc_L-PSP
SX1_k127_1801566_0	1297865.APJD01000011_gene6812	1.582e-226	703.0	COG0513@1|root,COG0513@2|Bacteria,1MU49@1224|Proteobacteria,2TR6Q@28211|Alphaproteobacteria,3JRCA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Belongs to the DEAD box helicase family	rhlE	-	3.6.4.13	ko:K11927	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	DEAD,Helicase_C
SX1_k127_1801566_5	398525.KB900701_gene2306	5.33e-57	199.0	COG0361@1|root,COG0361@2|Bacteria,1MZFU@1224|Proteobacteria,2UBRU@28211|Alphaproteobacteria,3JZIK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex	infA	GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877	-	ko:K02518	-	-	-	-	ko00000,ko03012	-	-	-	eIF-1a
SX1_k127_1801566_6	666684.AfiDRAFT_0603	5.388e-38	142.0	COG1278@1|root,COG1278@2|Bacteria,1N6Q5@1224|Proteobacteria,2UF6W@28211|Alphaproteobacteria,3K084@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	'Cold-shock' DNA-binding domain	QU41_19825	-	-	ko:K03704	-	-	-	-	ko00000,ko03000	-	-	-	CSD
SX1_k127_1801566_7	224911.27348412	5.035e-08	65.0	2978Y@1|root,2ZUGP@2|Bacteria,1RD02@1224|Proteobacteria,2U7VP@28211|Alphaproteobacteria,3JZ2X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1801566_2	1297865.APJD01000011_gene6809	2.806e-125	412.0	COG4961@1|root,COG4961@2|Bacteria,1N744@1224|Proteobacteria,2UGR2@28211|Alphaproteobacteria,3JWHX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	TadE-like protein	-	-	-	-	-	-	-	-	-	-	-	-	TadE
SX1_k127_1801566_4	288000.BBta_7024	9.874e-65	226.0	COG4961@1|root,COG4961@2|Bacteria,1N3XK@1224|Proteobacteria,2UBRJ@28211|Alphaproteobacteria,3JXUI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	TadE-like protein	-	-	-	ko:K02651	ko04112,map04112	-	-	-	ko00000,ko00001,ko02035,ko02044	-	-	-	TadE
SX1_k127_1801566_3	1297865.APJD01000011_gene6807	5.523e-100	326.0	COG4964@1|root,COG4964@2|Bacteria,1R3QI@1224|Proteobacteria,2UGFC@28211|Alphaproteobacteria,3JWX7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Pilus formation protein N terminal region	pilQ	-	-	-	-	-	-	-	-	-	-	-	T2SS-T3SS_pil_N
SX1_k127_1801566_1	1297865.APJD01000011_gene6806	4.32e-226	700.0	COG1287@1|root,COG1287@2|Bacteria,1N1IK@1224|Proteobacteria,2TUYH@28211|Alphaproteobacteria,3JSAB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	oligosaccharyl transferase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1808555_10	1297865.APJD01000012_gene1351	1.054e-23	100.0	COG0683@1|root,COG0683@2|Bacteria,1MW1I@1224|Proteobacteria,2TTZF@28211|Alphaproteobacteria,3JT0P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein domain	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_1808555_2	1297865.APJD01000012_gene1352	6.803e-266	822.0	COG0683@1|root,COG0683@2|Bacteria,1MW1I@1224|Proteobacteria,2TTZF@28211|Alphaproteobacteria,3JT0P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein domain	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_1808555_0	1297865.APJD01000012_gene1353	0.0	1036.0	COG0154@1|root,COG0154@2|Bacteria,1MUVQ@1224|Proteobacteria,2TU7H@28211|Alphaproteobacteria,3JSWU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Amidase	MA20_39770	-	3.5.1.4	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	-	R02540,R03096,R03180,R03909,R05551,R05590	RC00010,RC00100,RC00950,RC01025	ko00000,ko00001,ko01000	-	-	-	Amidase
SX1_k127_1808555_5	1297865.APJD01000012_gene1354	4.588e-166	524.0	COG0559@1|root,COG0559@2|Bacteria,1R5BB@1224|Proteobacteria,2TT61@28211|Alphaproteobacteria,3JSC1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	MA20_39775	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_1808555_1	1230476.C207_06771	1.757e-270	832.0	COG0683@1|root,COG0683@2|Bacteria,1MUZU@1224|Proteobacteria,2TS7Z@28211|Alphaproteobacteria,3JR4F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein domain	MA20_39780	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_1808555_4	1230476.C207_06772	1.452e-211	661.0	COG4177@1|root,COG4177@2|Bacteria,1MX6P@1224|Proteobacteria,2TU00@28211|Alphaproteobacteria,3JUC7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	MA20_39785	-	-	ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_1808555_9	136993.KB900627_gene192	1.706e-42	166.0	COG4674@1|root,COG4674@2|Bacteria,1MUBR@1224|Proteobacteria,2TQVJ@28211|Alphaproteobacteria,36ZR5@31993|Methylocystaceae	28211|Alphaproteobacteria	S	Branched-chain amino acid ATP-binding cassette transporter	MA20_23055	-	-	ko:K11962	ko02010,map02010	M00323	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4.4,3.A.1.4.5	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_1808555_6	1297865.APJD01000012_gene1358	3.077e-142	456.0	COG0410@1|root,COG0410@2|Bacteria,1MY03@1224|Proteobacteria,2TSGC@28211|Alphaproteobacteria,3JV77@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ATPases associated with a variety of cellular activities	MA20_39795	-	-	ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran
SX1_k127_1808555_7	1297865.APJD01000012_gene1359	2.906e-96	316.0	COG0251@1|root,COG0251@2|Bacteria,1RD3E@1224|Proteobacteria,2U888@28211|Alphaproteobacteria,3JTNZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Endoribonuclease L-PSP	-	-	-	-	-	-	-	-	-	-	-	-	Ribonuc_L-PSP
SX1_k127_1808555_8	1297865.APJD01000012_gene1360	1.79e-78	268.0	COG2010@1|root,COG2010@2|Bacteria,1N8E1@1224|Proteobacteria,2UG6N@28211|Alphaproteobacteria,3JZCS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome C oxidase, cbb3-type, subunit III	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3
SX1_k127_1808555_3	1297865.APJD01000012_gene1361	1.607e-225	698.0	COG1231@1|root,COG1231@2|Bacteria,1MWPH@1224|Proteobacteria,2U05G@28211|Alphaproteobacteria,3JW1P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Flavin containing amine oxidoreductase	-	-	1.4.3.4	ko:K00274	ko00260,ko00330,ko00340,ko00350,ko00360,ko00380,ko00950,ko00982,ko01100,ko01110,ko04726,ko04728,ko05030,ko05031,ko05034,map00260,map00330,map00340,map00350,map00360,map00380,map00950,map00982,map01100,map01110,map04726,map04728,map05030,map05031,map05034	M00135	R02173,R02382,R02529,R02532,R02613,R02908,R02919,R04025,R04300,R04674,R04890,R04893,R04894,R04907,R04908,R08346,R08347,R08348,R11354	RC00062,RC00160,RC00225,RC00676,RC00807,RC00808,RC01808,RC02226,RC02713	ko00000,ko00001,ko00002,ko01000	-	-	-	Amino_oxidase
SX1_k127_1808587_4	1230476.C207_06767	1.016e-43	165.0	COG0683@1|root,COG0683@2|Bacteria,1MW1I@1224|Proteobacteria,2TTZF@28211|Alphaproteobacteria,3JT0P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein domain	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_1808587_3	1297865.APJD01000012_gene1350	2.725e-85	293.0	COG1846@1|root,COG1846@2|Bacteria,1N2K6@1224|Proteobacteria,2U39V@28211|Alphaproteobacteria,3JT1T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	MA20_39760	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SX1_k127_1808587_2	1297865.APJD01000012_gene1349	2.987e-93	306.0	COG3865@1|root,COG3865@2|Bacteria,1N7IY@1224|Proteobacteria,2U993@28211|Alphaproteobacteria,3JSA3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	3-demethylubiquinone-9 3-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	3-dmu-9_3-mt
SX1_k127_1808587_0	1297865.APJD01000012_gene1348	2.608e-159	502.0	COG3637@1|root,COG3637@2|Bacteria,1N4JR@1224|Proteobacteria,2UEXW@28211|Alphaproteobacteria,3K03M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Outer membrane protein beta-barrel domain	-	-	-	ko:K16079	-	-	-	-	ko00000,ko02000	1.B.4.2.1	-	-	OMP_b-brl
SX1_k127_1808587_1	1297865.APJD01000012_gene1347	2.834e-138	439.0	COG0457@1|root,COG3914@1|root,COG0457@2|Bacteria,COG3914@2|Bacteria,1MVMG@1224|Proteobacteria,2TRVB@28211|Alphaproteobacteria,3JR8N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_41,Methyltransf_23,TPR_1,TPR_11,TPR_16,TPR_2,TPR_8
SX1_k127_1813057_3	1297865.APJD01000030_gene1661	1.806e-192	601.0	COG2175@1|root,COG2175@2|Bacteria,1MVI6@1224|Proteobacteria,2TVHF@28211|Alphaproteobacteria,3JU8R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Taurine catabolism dioxygenase TauD, TfdA family	MA20_18150	-	-	ko:K06912	ko00361,ko01120,ko01220,map00361,map01120,map01220	-	R05419,R05493	RC01371,RC01372	ko00000,ko00001,ko01000	-	-	-	TauD
SX1_k127_1813057_4	1297865.APJD01000030_gene1662	1.798e-160	509.0	COG1028@1|root,COG1028@2|Bacteria,1MX8B@1224|Proteobacteria,2U26N@28211|Alphaproteobacteria,3JR5Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	MA20_18145	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
SX1_k127_1813057_5	1297865.APJD01000030_gene1663	1.738e-147	469.0	COG1028@1|root,COG1028@2|Bacteria,1MXQR@1224|Proteobacteria,2TW65@28211|Alphaproteobacteria,3JTUA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	MA20_18140	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
SX1_k127_1813057_7	1297865.APJD01000030_gene1664	3.219e-70	238.0	COG3237@1|root,COG3237@2|Bacteria,1RCYG@1224|Proteobacteria,2U7EZ@28211|Alphaproteobacteria,3JYUX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	CsbD-like	-	-	-	-	-	-	-	-	-	-	-	-	CsbD
SX1_k127_1813057_8	224911.27348412	1.487e-11	64.0	2978Y@1|root,2ZUGP@2|Bacteria,1RD02@1224|Proteobacteria,2U7VP@28211|Alphaproteobacteria,3JZ2X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1813057_0	1297865.APJD01000030_gene1665	0.0	1115.0	COG2845@1|root,COG2845@2|Bacteria,1R4X7@1224|Proteobacteria,2U5AU@28211|Alphaproteobacteria,3JRNF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF459)	-	-	-	ko:K09795	-	-	-	-	ko00000	-	-	-	DUF459
SX1_k127_1813057_1	1297865.APJD01000030_gene1666	5.777e-306	938.0	COG2951@1|root,COG3409@1|root,COG2951@2|Bacteria,COG3409@2|Bacteria,1MUZ3@1224|Proteobacteria,2TRP0@28211|Alphaproteobacteria,3JSHA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Putative peptidoglycan binding domain	MA20_18125	-	-	ko:K00786,ko:K08305	-	-	-	-	ko00000,ko01000,ko01011	-	GH103	-	PG_binding_1,SLT_2
SX1_k127_1813057_6	1297865.APJD01000030_gene1667	6.955e-80	268.0	COG0789@1|root,COG0789@2|Bacteria,1RHT6@1224|Proteobacteria,2UCHB@28211|Alphaproteobacteria,3K21W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, mercury resistance	-	-	-	-	-	-	-	-	-	-	-	-	MerR,MerR-DNA-bind,MerR_1
SX1_k127_1813057_2	1297865.APJD01000030_gene1668	1.074e-274	846.0	COG1902@1|root,COG1902@2|Bacteria,1MVE0@1224|Proteobacteria,2TQPY@28211|Alphaproteobacteria,3JXWH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NADH:flavin oxidoreductase / NADH oxidase family	-	-	1.5.8.1,1.5.8.2	ko:K00317	ko00680,ko01120,ko01200,map00680,map01120,map01200	-	R01588,R02511	RC00185,RC00556,RC00557,RC00732	ko00000,ko00001,ko01000	-	-	-	Oxidored_FMN,Pyr_redox_2
SX1_k127_1816768_8	1297865.APJD01000004_gene5294	6.282e-24	102.0	COG0179@1|root,COG0179@2|Bacteria,1MUPF@1224|Proteobacteria,2TQQG@28211|Alphaproteobacteria,3JQYM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Fumarylacetoacetate (FAA) hydrolase family	MA20_19215	-	5.3.3.10	ko:K01826	ko00350,ko01120,ko01220,map00350,map01120,map01220	M00533	R04379,R04482	RC01141,RC01162	ko00000,ko00001,ko00002,ko01000	-	-	-	FAA_hydrolase
SX1_k127_1816768_5	1297865.APJD01000004_gene5293	6.014e-137	437.0	COG1309@1|root,COG1309@2|Bacteria,1R4IA@1224|Proteobacteria,2U4FJ@28211|Alphaproteobacteria,3K5ZW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_1816768_0	1297865.APJD01000004_gene5292	6.752e-302	930.0	COG0477@1|root,COG2814@2|Bacteria,1QTY0@1224|Proteobacteria,2TXVS@28211|Alphaproteobacteria,3K6VC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
SX1_k127_1816768_7	1297865.APJD01000004_gene5291	5.116e-66	247.0	2A8JQ@1|root,30XN1@2|Bacteria,1RGNE@1224|Proteobacteria,2U8XM@28211|Alphaproteobacteria,3JYTY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1816768_2	1297865.APJD01000004_gene5290	6.329e-194	605.0	COG0491@1|root,COG0491@2|Bacteria,1N22F@1224|Proteobacteria,2U2V5@28211|Alphaproteobacteria,3JSGW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
SX1_k127_1816768_1	1297865.APJD01000004_gene5289	3.32e-208	659.0	COG0604@1|root,COG0604@2|Bacteria,1MXRX@1224|Proteobacteria,2TRSQ@28211|Alphaproteobacteria,3JSKI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Zinc-binding dehydrogenase	-	-	1.6.5.5	ko:K00344	-	-	-	-	ko00000,ko01000	-	-	-	ADH_N,ADH_zinc_N,ADH_zinc_N_2
SX1_k127_1816768_4	1297865.APJD01000004_gene5288	9.244e-166	527.0	COG1028@1|root,COG1028@2|Bacteria,1MWJI@1224|Proteobacteria,2TRNJ@28211|Alphaproteobacteria,3JS4Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	MA20_19195	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
SX1_k127_1816768_6	1297865.APJD01000004_gene5287	2.479e-96	316.0	COG1286@1|root,COG1286@2|Bacteria,1R47T@1224|Proteobacteria,2U0T2@28211|Alphaproteobacteria,3JTVE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Colicin V production protein	-	-	-	ko:K03558	-	-	-	-	ko00000	-	-	-	Colicin_V
SX1_k127_1816768_9	224911.27354970	1.427e-05	48.0	COG2897@1|root,COG2897@2|Bacteria,1MW4B@1224|Proteobacteria,2TR9R@28211|Alphaproteobacteria,3JT1H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rhodanese Homology Domain	sseA	-	2.8.1.1,2.8.1.2	ko:K01011	ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122	-	R01931,R03105,R03106	RC00214	ko00000,ko00001,ko01000	-	-	-	Rhodanese
SX1_k127_1816768_3	1297865.APJD01000004_gene5286	5.388e-189	589.0	COG2303@1|root,COG2303@2|Bacteria,1MV19@1224|Proteobacteria,2TQKQ@28211|Alphaproteobacteria,3JR5T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the GMC oxidoreductase family	MA20_19170	-	-	-	-	-	-	-	-	-	-	-	GMC_oxred_C,GMC_oxred_N
SX1_k127_1826591_5	1297865.APJD01000015_gene3425	4.843e-96	317.0	COG3544@1|root,COG3544@2|Bacteria,1N0KY@1224|Proteobacteria,2UC2H@28211|Alphaproteobacteria,3K0F7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF305)	-	-	-	-	-	-	-	-	-	-	-	-	DUF305
SX1_k127_1826591_6	1040989.AWZU01000001_gene5940	1.267e-90	301.0	COG4567@1|root,COG4567@2|Bacteria,1RD7J@1224|Proteobacteria,2TSK7@28211|Alphaproteobacteria,3JS1J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Bacterial regulatory protein, Fis family	MA20_39985	-	-	ko:K15012	ko02020,map02020	M00523	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	HTH_8,Response_reg
SX1_k127_1826591_1	1297865.APJD01000015_gene3427	8.751e-286	880.0	COG4191@1|root,COG4191@2|Bacteria,1MWR3@1224|Proteobacteria,2TSS0@28211|Alphaproteobacteria,3JSSJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	His Kinase A (phosphoacceptor) domain	MA20_39990	-	2.7.13.3	ko:K15011	ko02020,map02020	M00523	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c
SX1_k127_1826591_4	288000.BBta_2034	8.233e-99	335.0	COG3346@1|root,COG3346@2|Bacteria,1MWWG@1224|Proteobacteria,2U0N5@28211|Alphaproteobacteria,3JS5J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SURF1 family	surF	-	-	ko:K14998	-	-	-	-	ko00000,ko03029	3.D.4.8	-	-	SURF1
SX1_k127_1826591_7	1297865.APJD01000015_gene3429	2.253e-74	255.0	COG3125@1|root,COG3125@2|Bacteria,1RHE5@1224|Proteobacteria,2U9NH@28211|Alphaproteobacteria,3JY77@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Prokaryotic Cytochrome C oxidase subunit IV	cyoD	-	-	ko:K02300	ko00190,ko01100,map00190,map01100	M00417	-	-	ko00000,ko00001,ko00002	3.D.4.5	-	-	COX4_pro
SX1_k127_1826591_3	1297865.APJD01000015_gene3430	1.433e-133	426.0	COG1845@1|root,COG1845@2|Bacteria,1MUCK@1224|Proteobacteria,2TSVR@28211|Alphaproteobacteria,3JSZ6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome c oxidase subunit III	cyoC	-	1.9.3.1	ko:K02276,ko:K02299	ko00190,ko01100,map00190,map01100	M00155,M00417	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.4,3.D.4.5,3.D.4.6	-	-	COX3
SX1_k127_1826591_0	1297865.APJD01000015_gene3431	0.0	1369.0	COG0843@1|root,COG0843@2|Bacteria,1MU7S@1224|Proteobacteria,2TQP1@28211|Alphaproteobacteria,3JR26@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Belongs to the heme-copper respiratory oxidase family	cyoB	-	1.10.3.10	ko:K02298	ko00190,ko01100,map00190,map01100	M00417	R11335	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.5	-	-	COX1
SX1_k127_1826591_2	1297865.APJD01000015_gene3432	5.254e-251	775.0	COG1622@1|root,COG1622@2|Bacteria,1MWHZ@1224|Proteobacteria,2U0IR@28211|Alphaproteobacteria,3JUA6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	COX Aromatic Rich Motif	cyoA	-	1.10.3.10	ko:K02297	ko00190,ko01100,map00190,map01100	M00417	R11335	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.5	-	-	COX2,COX_ARM
SX1_k127_1826591_8	1297865.APJD01000015_gene3433	3.251e-46	171.0	COG0477@1|root,COG0477@2|Bacteria,1MU46@1224|Proteobacteria,2TQVP@28211|Alphaproteobacteria,3JRPG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	MA20_40020	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
SX1_k127_1826635_10	1297865.APJD01000039_gene1740	5.239e-47	169.0	COG3750@1|root,COG3750@2|Bacteria,1N77J@1224|Proteobacteria,2UFX6@28211|Alphaproteobacteria,3JZE3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the UPF0335 family	MA20_03860	-	-	-	-	-	-	-	-	-	-	-	DUF2312
SX1_k127_1826635_9	172088.AUGA01000032_gene1453	3.425e-61	211.0	COG3492@1|root,COG3492@2|Bacteria,1MZ3I@1224|Proteobacteria,2UC11@28211|Alphaproteobacteria,3JZFI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1244)	MA20_03865	-	-	ko:K09948	-	-	-	-	ko00000	-	-	-	DUF1244
SX1_k127_1826635_5	172088.AUGA01000032_gene1452	1.324e-116	376.0	COG5480@1|root,COG5480@2|Bacteria,1RISQ@1224|Proteobacteria,2U9NW@28211|Alphaproteobacteria,3JTM3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1036)	MA20_03870	-	-	-	-	-	-	-	-	-	-	-	DUF1036
SX1_k127_1826635_2	1297865.APJD01000039_gene1737	5.905e-301	928.0	COG0469@1|root,COG0469@2|Bacteria,1MU21@1224|Proteobacteria,2TRFV@28211|Alphaproteobacteria,3JU12@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Belongs to the pyruvate kinase family	pyk	-	2.7.1.40	ko:K00873	ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	M00001,M00002,M00049,M00050	R00200,R00430,R01138,R01858,R02320	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	-	-	-	PK,PK_C
SX1_k127_1826635_7	1297865.APJD01000039_gene1736	1.38e-85	284.0	COG1764@1|root,COG1764@2|Bacteria,1RH9U@1224|Proteobacteria,2U768@28211|Alphaproteobacteria,3JYCF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	OsmC-like protein	osmC	GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006970,GO:0006972,GO:0006979,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0033194,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1990748	-	ko:K04063	-	-	-	-	ko00000	-	-	-	OsmC
SX1_k127_1826635_4	1297865.APJD01000039_gene1735	3.984e-124	401.0	COG1309@1|root,COG1309@2|Bacteria,1RJK5@1224|Proteobacteria,2TSES@28211|Alphaproteobacteria,3JUVU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	MA20_03880	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_1826635_1	1297865.APJD01000039_gene1734	0.0	1000.0	COG1287@1|root,COG1287@2|Bacteria,1N1IK@1224|Proteobacteria,2TUYH@28211|Alphaproteobacteria,3JSAB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	oligosaccharyl transferase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1826635_3	1297865.APJD01000039_gene1733	2.737e-263	813.0	COG0683@1|root,COG0683@2|Bacteria,1N45V@1224|Proteobacteria,2U18M@28211|Alphaproteobacteria,3JVGS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_1826635_8	1230476.C207_04494	2.425e-71	242.0	2DMMQ@1|root,32SHK@2|Bacteria,1N2WS@1224|Proteobacteria,2UC62@28211|Alphaproteobacteria,3JYW0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3052)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3052
SX1_k127_1826635_0	1297865.APJD01000039_gene1731	0.0	1255.0	COG0465@1|root,COG0465@2|Bacteria,1MU6J@1224|Proteobacteria,2TSYQ@28211|Alphaproteobacteria,3JRNK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins	ftsH	-	-	ko:K03798	-	M00742	-	-	ko00000,ko00002,ko01000,ko01002,ko03110	-	-	-	AAA,FtsH_ext,Peptidase_M41
SX1_k127_1826635_6	1297865.APJD01000039_gene1730	1.172e-109	355.0	COG0037@1|root,COG0037@2|Bacteria,1MU85@1224|Proteobacteria,2TRK1@28211|Alphaproteobacteria,3JS5P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine	tilS	-	6.3.4.19	ko:K04075	-	-	R09597	RC02633,RC02634	ko00000,ko01000,ko03016	-	-	-	ATP_bind_3
SX1_k127_1831788_2	1297865.APJD01000003_gene6119	4.67e-81	270.0	COG1173@1|root,COG1173@2|Bacteria,1MWMX@1224|Proteobacteria,2TRX5@28211|Alphaproteobacteria,3JRYA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Binding-protein-dependent transport system inner membrane component	MA20_22930	-	-	ko:K02034	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1,OppC_N
SX1_k127_1831788_1	1297865.APJD01000003_gene6120	6.812e-192	601.0	COG0601@1|root,COG0601@2|Bacteria,1MU8Z@1224|Proteobacteria,2TRS8@28211|Alphaproteobacteria,3JS1M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Binding-protein-dependent transport system inner membrane component	nikB	-	-	ko:K02033,ko:K15585	ko02010,ko02024,map02010,map02024	M00239,M00440	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
SX1_k127_1831788_0	1297865.APJD01000003_gene6121	2.665e-275	846.0	COG0747@1|root,COG0747@2|Bacteria,1MUZH@1224|Proteobacteria,2TT1G@28211|Alphaproteobacteria,3JQQ7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Bacterial extracellular solute-binding proteins, family 5 Middle	-	-	-	ko:K02035	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	SBP_bac_5
SX1_k127_1833779_3	1297865.APJD01000016_gene3404	2.83e-163	514.0	COG0500@1|root,COG2226@2|Bacteria,1PN45@1224|Proteobacteria,2U137@28211|Alphaproteobacteria,3JTDX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Putative S-adenosyl-L-methionine-dependent methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
SX1_k127_1833779_4	1121448.DGI_4016	8.346e-48	178.0	COG0110@1|root,COG0110@2|Bacteria,1N6SQ@1224|Proteobacteria,42PE2@68525|delta/epsilon subdivisions,2WKVK@28221|Deltaproteobacteria,2MDRS@213115|Desulfovibrionales	28221|Deltaproteobacteria	S	Bacterial transferase hexapeptide (six repeats)	-	-	2.3.1.79	ko:K00661	-	-	-	-	ko00000,ko01000	-	-	-	Hexapep,Hexapep_2
SX1_k127_1833779_2	1297865.APJD01000016_gene3402	1.631e-183	583.0	COG2227@1|root,COG2227@2|Bacteria,1RCSH@1224|Proteobacteria,2U5XV@28211|Alphaproteobacteria,3JYCI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
SX1_k127_1833779_1	1297865.APJD01000016_gene3401	3.891e-246	759.0	COG4641@1|root,COG4641@2|Bacteria,1R62R@1224|Proteobacteria,2TVHD@28211|Alphaproteobacteria,3JWFP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_2
SX1_k127_1833779_0	1297865.APJD01000016_gene3400	1.316e-274	844.0	COG0367@1|root,COG0367@2|Bacteria,1MW4E@1224|Proteobacteria,2TSCY@28211|Alphaproteobacteria,3JS0Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	-	R00578	RC00010	ko00000,ko00001,ko01000,ko01002	-	-	-	Asn_synthase,GATase_7
SX1_k127_1834868_0	381666.H16_B2544	1.422e-70	259.0	COG1752@1|root,COG4775@1|root,COG1752@2|Bacteria,COG4775@2|Bacteria,1MUM9@1224|Proteobacteria,2VJRI@28216|Betaproteobacteria,1KBZ2@119060|Burkholderiaceae	28216|Betaproteobacteria	M	Surface antigen	-	-	-	ko:K07001	-	-	-	-	ko00000	-	-	-	Bac_surface_Ag,POTRA,Patatin
SX1_k127_1834868_1	396588.Tgr7_0025	2.196e-19	91.0	COG0543@1|root,COG0633@1|root,COG0543@2|Bacteria,COG0633@2|Bacteria,1MV72@1224|Proteobacteria,1RPH5@1236|Gammaproteobacteria,1WXHI@135613|Chromatiales	135613|Chromatiales	C	Oxidoreductase FAD-binding domain	-	-	1.17.1.1	ko:K00523	ko00520,map00520	-	R03391,R03392	RC00230	ko00000,ko00001,ko01000	-	-	-	FAD_binding_6,Fer2,NAD_binding_1
SX1_k127_1846500_5	1297865.APJD01000003_gene6346	4.444e-74	256.0	COG1595@1|root,COG1595@2|Bacteria,1R44W@1224|Proteobacteria,2U1R0@28211|Alphaproteobacteria,3JVBC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2,SnoaL_2
SX1_k127_1846500_6	1297865.APJD01000003_gene6345	3.132e-57	203.0	COG3631@1|root,COG3631@2|Bacteria,1RI43@1224|Proteobacteria,2UAI9@28211|Alphaproteobacteria,3JZCQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Ketosteroid isomerase-related protein	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1846500_1	1297865.APJD01000003_gene6344	8.82e-269	829.0	COG1252@1|root,COG1252@2|Bacteria,1MX96@1224|Proteobacteria,2TQT2@28211|Alphaproteobacteria,3JTS4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Pyridine nucleotide-disulphide oxidoreductase	ndh	-	1.6.99.3	ko:K03885	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2,cNMP_binding
SX1_k127_1846500_0	1297865.APJD01000003_gene6343	0.0	1155.0	COG0627@1|root,COG0627@2|Bacteria,1MX6W@1224|Proteobacteria,2TSCC@28211|Alphaproteobacteria,3JTMK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tannase and feruloyl esterase	-	-	-	-	-	-	-	-	-	-	-	-	Tannase
SX1_k127_1846500_3	1297865.APJD01000003_gene6342	5.2e-204	638.0	COG2207@1|root,COG2207@2|Bacteria,1Q1BF@1224|Proteobacteria,2U14T@28211|Alphaproteobacteria,3JU1B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding_2,HTH_18
SX1_k127_1846500_4	1297865.APJD01000003_gene6341	1.267e-138	445.0	COG1335@1|root,COG1335@2|Bacteria,1QU95@1224|Proteobacteria,2TWZY@28211|Alphaproteobacteria,3JTD8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Isochorismatase family	-	-	-	-	-	-	-	-	-	-	-	-	Isochorismatase
SX1_k127_1846500_2	1230476.C207_02787	8.157e-258	797.0	COG0683@1|root,COG0683@2|Bacteria,1QN5S@1224|Proteobacteria,2TRVN@28211|Alphaproteobacteria,3JVB4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein domain	MA20_22640	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_184799_9	1297865.APJD01000033_gene6913	1.246e-44	162.0	COG3620@1|root,COG3620@2|Bacteria,1N0SA@1224|Proteobacteria,2UD0K@28211|Alphaproteobacteria,3K0RK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Transcriptional	-	-	-	-	-	-	-	-	-	-	-	-	HTH_3
SX1_k127_184799_8	1297865.APJD01000033_gene6912	3.307e-52	186.0	2E4AR@1|root,32Z6E@2|Bacteria,1MZRK@1224|Proteobacteria,2UC4U@28211|Alphaproteobacteria,3K5U4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized conserved protein (DUF2285)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2285
SX1_k127_184799_11	1429916.X566_09420	7.45e-14	76.0	2EHBX@1|root,33B3S@2|Bacteria,1NHEE@1224|Proteobacteria,2UKX6@28211|Alphaproteobacteria,3K29A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_184799_5	1320556.AVBP01000003_gene3881	9.774e-85	284.0	COG5419@1|root,COG5419@2|Bacteria,1RJ85@1224|Proteobacteria,2UANH@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Uncharacterized conserved protein (DUF2285)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2285
SX1_k127_184799_7	1320556.AVBP01000003_gene3882	1.641e-53	192.0	COG3311@1|root,COG3311@2|Bacteria,1RGX4@1224|Proteobacteria,2UBWS@28211|Alphaproteobacteria,43MEN@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	K	Helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_17
SX1_k127_184799_0	883078.HMPREF9695_03895	4.86e-252	778.0	COG5534@1|root,COG5534@2|Bacteria,1MXQ0@1224|Proteobacteria,2TRBV@28211|Alphaproteobacteria,3JSIT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	PFAM Replication initiator protein A	-	-	-	-	-	-	-	-	-	-	-	-	RPA
SX1_k127_184799_2	1304878.AUGD01000042_gene5365	1.19e-131	423.0	COG1192@1|root,COG1192@2|Bacteria,1MWRE@1224|Proteobacteria,2TSJZ@28211|Alphaproteobacteria,3JTAG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	VirC1 protein	-	-	-	ko:K03496	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	AAA_31
SX1_k127_184799_10	1304878.AUGD01000042_gene5366	1.672e-43	166.0	2E43J@1|root,32YZW@2|Bacteria,1N99M@1224|Proteobacteria,2UH92@28211|Alphaproteobacteria,3K00Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_184799_4	883078.HMPREF9695_03892	6.725e-112	364.0	2BYDP@1|root,2Z7UG@2|Bacteria,1P8PK@1224|Proteobacteria,2U09C@28211|Alphaproteobacteria,3JS6P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2840)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2840
SX1_k127_184799_3	1297865.APJD01000033_gene6906	8.046e-116	378.0	COG4959@1|root,COG4959@2|Bacteria,1MV1E@1224|Proteobacteria,2TV10@28211|Alphaproteobacteria,3JXJY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	OU	Signal peptidase, peptidase S26	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S26
SX1_k127_184799_6	1297865.APJD01000033_gene6905	7.886e-73	248.0	COG5489@1|root,COG5489@2|Bacteria,1REX2@1224|Proteobacteria,2U92M@28211|Alphaproteobacteria,3JZ4E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF736)	-	-	-	-	-	-	-	-	-	-	-	-	DUF736
SX1_k127_184799_1	883078.HMPREF9695_03889	3.58e-140	446.0	COG0741@1|root,COG0741@2|Bacteria,1MZ4X@1224|Proteobacteria,2TU56@28211|Alphaproteobacteria,3JXSM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Transglycosylase SLT domain	-	-	-	-	-	-	-	-	-	-	-	-	SLT
SX1_k127_1848770_14	1297865.APJD01000003_gene6066	6.95e-132	421.0	COG3181@1|root,COG3181@2|Bacteria,1MW18@1224|Proteobacteria,2U2TB@28211|Alphaproteobacteria,3JT1W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter family receptor	-	-	-	-	-	-	-	-	-	-	-	-	TctC
SX1_k127_1848770_8	1297865.APJD01000003_gene6065	2.653e-230	713.0	COG1162@1|root,COG1162@2|Bacteria,1MUEF@1224|Proteobacteria,2TR5R@28211|Alphaproteobacteria,3K3ZY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	RsgA GTPase	rsgA	-	3.1.3.100	ko:K06949	ko00730,ko01100,map00730,map01100	-	R00615,R02135	RC00002,RC00017	ko00000,ko00001,ko01000,ko03009	-	-	-	RsgA_GTPase
SX1_k127_1848770_5	1297865.APJD01000003_gene6064	2.993e-265	826.0	COG2271@1|root,COG2271@2|Bacteria,1MUSX@1224|Proteobacteria,2TSQW@28211|Alphaproteobacteria,3K2XG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	-	-	-	ko:K08191	-	-	-	-	ko00000,ko02000	2.A.1.14.2	-	-	MFS_1
SX1_k127_1848770_9	1297865.APJD01000003_gene6063	2.154e-225	706.0	COG2070@1|root,COG2070@2|Bacteria,1MU2F@1224|Proteobacteria,2TRM9@28211|Alphaproteobacteria,3K2PH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	FMN-dependent dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	NMO
SX1_k127_1848770_3	1297865.APJD01000003_gene6062	0.0	1047.0	COG3203@1|root,COG3203@2|Bacteria,1MXN6@1224|Proteobacteria,2TSH7@28211|Alphaproteobacteria,3JQSQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane	ropAch1	-	-	-	-	-	-	-	-	-	-	-	Porin_2
SX1_k127_1848770_13	1297865.APJD01000003_gene6061	2.874e-141	449.0	COG1309@1|root,COG1309@2|Bacteria,1N91A@1224|Proteobacteria,2VFY1@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_1848770_1	1297865.APJD01000003_gene6060	0.0	1598.0	COG3119@1|root,COG3119@2|Bacteria,1MV92@1224|Proteobacteria,2TTXG@28211|Alphaproteobacteria,3JVJZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Sulfatase	-	-	-	-	-	-	-	-	-	-	-	-	Sulfatase
SX1_k127_1848770_10	1297865.APJD01000003_gene6059	2.252e-210	655.0	COG1262@1|root,COG1262@2|Bacteria,1MZ25@1224|Proteobacteria,2TRJH@28211|Alphaproteobacteria,3JTEW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sulfatase-modifying factor enzyme 1	-	-	-	-	-	-	-	-	-	-	-	-	FGE-sulfatase
SX1_k127_1848770_0	1297865.APJD01000003_gene6058	0.0	1604.0	COG3119@1|root,COG3119@2|Bacteria,1MV92@1224|Proteobacteria,2TTXG@28211|Alphaproteobacteria,3JVJZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Sulfatase	-	-	-	-	-	-	-	-	-	-	-	-	Sulfatase
SX1_k127_1848770_2	1297865.APJD01000003_gene6057	0.0	1333.0	COG1042@1|root,COG1042@2|Bacteria,1MW98@1224|Proteobacteria,2TR24@28211|Alphaproteobacteria,3JRT1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA binding domain	-	-	-	-	-	-	-	-	-	-	-	-	ATP-grasp_5,Acetyltransf_3,CoA_binding_2,Succ_CoA_lig
SX1_k127_1848770_6	1297865.APJD01000003_gene6056	3.949e-264	815.0	COG1960@1|root,COG1960@2|Bacteria,1MU2V@1224|Proteobacteria,2TSK3@28211|Alphaproteobacteria,3JWBK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	MA20_16145	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_1848770_11	1297865.APJD01000003_gene6055	1.395e-193	603.0	COG2175@1|root,COG2175@2|Bacteria,1MV5K@1224|Proteobacteria,2TQTZ@28211|Alphaproteobacteria,3JY5P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Taurine catabolism dioxygenase TauD, TfdA family	-	-	1.14.11.17	ko:K03119	ko00430,ko00920,map00430,map00920	-	R05320	RC01331	ko00000,ko00001,ko01000	-	-	-	TauD
SX1_k127_1848770_15	1297865.APJD01000003_gene6054	3.692e-128	410.0	COG1309@1|root,COG1309@2|Bacteria,1NFRC@1224|Proteobacteria,2UGXZ@28211|Alphaproteobacteria,3K199@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_1848770_4	1297865.APJD01000003_gene6053	9.38e-302	933.0	COG2376@1|root,COG2376@2|Bacteria,1MVSR@1224|Proteobacteria,2TTK3@28211|Alphaproteobacteria,3JUYN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Dak1 domain	dhaK	-	2.7.1.28,2.7.1.29,4.6.1.15	ko:K00863	ko00051,ko00561,ko00680,ko01100,ko01120,ko01200,ko04622,map00051,map00561,map00680,map01100,map01120,map01200,map04622	M00344	R01011,R01059	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	Dak1,Dak2
SX1_k127_1848770_7	1297865.APJD01000003_gene6052	1.713e-255	790.0	COG0715@1|root,COG0715@2|Bacteria,1R9FK@1224|Proteobacteria,2U2KX@28211|Alphaproteobacteria,3K0BG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NMT1/THI5 like	-	-	-	ko:K02051	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	NMT1
SX1_k127_1848770_12	1297865.APJD01000003_gene6051	8.064e-162	512.0	COG0600@1|root,COG0600@2|Bacteria,1N0FV@1224|Proteobacteria,2U1I5@28211|Alphaproteobacteria,3K6GK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02050	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	BPD_transp_1
SX1_k127_1848770_16	1297865.APJD01000003_gene6050	1.098e-109	355.0	COG1116@1|root,COG1116@2|Bacteria,1MUIM@1224|Proteobacteria,2TRHM@28211|Alphaproteobacteria,3JUE4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ATPases associated with a variety of cellular activities	-	-	-	ko:K02049	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	ABC_tran
SX1_k127_1855810_5	1230476.C207_03767	7.662e-181	566.0	COG0477@1|root,COG0477@2|Bacteria,1RGPN@1224|Proteobacteria,2TQKW@28211|Alphaproteobacteria,3JS9D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	MFS/sugar transport protein	MA20_23265	-	-	ko:K03446	-	M00701	-	-	ko00000,ko00002,ko02000	2.A.1.3	-	-	MFS_1
SX1_k127_1855810_1	1297865.APJD01000035_gene5492	4.122e-251	779.0	COG1566@1|root,COG1566@2|Bacteria,1MU7I@1224|Proteobacteria,2TS39@28211|Alphaproteobacteria,3JS8W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	HlyD membrane-fusion protein of T1SS	-	-	-	ko:K03543	-	M00701	-	-	ko00000,ko00002,ko02000	8.A.1.1	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
SX1_k127_1855810_7	652103.Rpdx1_0547	2.189e-58	207.0	COG1846@1|root,COG1846@2|Bacteria,1MZY5@1224|Proteobacteria,2U9EE@28211|Alphaproteobacteria,3JSF5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	MarR family	MA20_23255	-	-	ko:K06075	-	-	-	-	ko00000,ko03000	-	-	-	MarR,MarR_2
SX1_k127_1855810_6	1297865.APJD01000035_gene5494	1.42e-102	336.0	COG0735@1|root,COG0735@2|Bacteria,1MZIW@1224|Proteobacteria,2U9G4@28211|Alphaproteobacteria,3JS2Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the Fur family	MA20_23250	-	-	ko:K09823	ko02024,map02024	-	-	-	ko00000,ko00001,ko03000	-	-	-	FUR
SX1_k127_1855810_3	1297865.APJD01000035_gene5495	3.833e-201	627.0	COG0697@1|root,COG0697@2|Bacteria,1R6KH@1224|Proteobacteria,2TTBR@28211|Alphaproteobacteria,3JWIF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	MA20_23245	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_1855810_4	1297865.APJD01000035_gene5496	3.369e-194	606.0	COG2897@1|root,COG2897@2|Bacteria,1MW4B@1224|Proteobacteria,2TTCU@28211|Alphaproteobacteria,3JTP9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rhodanese Homology Domain	-	-	2.8.1.1,2.8.1.2	ko:K01011	ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122	-	R01931,R03105,R03106	RC00214	ko00000,ko00001,ko01000	-	-	-	Rhodanese
SX1_k127_1855810_0	1297865.APJD01000035_gene5497	1.368e-278	857.0	COG0821@1|root,COG0821@2|Bacteria,1MUAX@1224|Proteobacteria,2TQSI@28211|Alphaproteobacteria,3JRWP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate	ispG	GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576	1.17.7.1,1.17.7.3	ko:K03526	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R08689,R10859	RC01486	ko00000,ko00001,ko00002,ko01000	-	-	-	GcpE
SX1_k127_1855810_2	1297865.APJD01000035_gene5498	1.633e-205	639.0	COG2175@1|root,COG2175@2|Bacteria,1MV5K@1224|Proteobacteria,2TQTZ@28211|Alphaproteobacteria,3JWFY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Taurine catabolism dioxygenase TauD, TfdA family	MA20_23235	-	1.14.11.17	ko:K03119	ko00430,ko00920,map00430,map00920	-	R05320	RC01331	ko00000,ko00001,ko01000	-	-	-	TauD
SX1_k127_1855810_8	398525.KB900701_gene1252	1.965e-45	165.0	COG4638@1|root,COG4638@2|Bacteria,1MX47@1224|Proteobacteria,2TV03@28211|Alphaproteobacteria,3JTQC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rieske [2Fe-2S] domain	-	-	-	-	-	-	-	-	-	-	-	-	Rieske
SX1_k127_1867806_2	1297865.APJD01000036_gene1431	7.052e-93	306.0	COG2130@1|root,COG2130@2|Bacteria,1MUR0@1224|Proteobacteria,2U16B@28211|Alphaproteobacteria,3JSRG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2855)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2855
SX1_k127_1867806_0	1297865.APJD01000036_gene1432	0.0	1060.0	COG0318@1|root,COG0318@2|Bacteria,1MUIC@1224|Proteobacteria,2TRRZ@28211|Alphaproteobacteria,3JR73@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	-	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
SX1_k127_1867806_1	1297865.APJD01000036_gene1433	1.191e-167	529.0	COG2070@1|root,COG2070@2|Bacteria,1MU0U@1224|Proteobacteria,2TS5U@28211|Alphaproteobacteria,3JUQ7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Nitronate monooxygenase	MA20_20575	-	1.13.12.16	ko:K00459	ko00910,map00910	-	R00025	RC02541,RC02759	ko00000,ko00001,ko01000	-	-	-	NMO
SX1_k127_1867919_0	1297865.APJD01000014_gene831	0.0	1350.0	COG1629@1|root,COG3637@1|root,COG3637@2|Bacteria,COG4771@2|Bacteria,1QTS8@1224|Proteobacteria,2TW3Y@28211|Alphaproteobacteria,3K6ZY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	MP	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SX1_k127_1867919_3	1297865.APJD01000014_gene830	9.91e-96	316.0	COG1321@1|root,COG1321@2|Bacteria,1RH2Z@1224|Proteobacteria,2UA3F@28211|Alphaproteobacteria,3JZ7Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Helix-turn-helix diphteria tox regulatory element	mntR	-	-	ko:K11924	-	-	-	-	ko00000,ko03000	-	-	-	Fe_dep_repr_C,Fe_dep_repress
SX1_k127_1867919_2	1297865.APJD01000014_gene829	1.142e-182	574.0	COG1305@1|root,COG1305@2|Bacteria,1R9WH@1224|Proteobacteria,2U80B@28211|Alphaproteobacteria,3JZ3A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Transglutaminase-like superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Transglut_core
SX1_k127_1867919_1	1230476.C207_00516	2.655e-256	795.0	COG0330@1|root,COG0330@2|Bacteria,1MW1D@1224|Proteobacteria,2TRE5@28211|Alphaproteobacteria,3JVTX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	SPFH domain / Band 7 family	-	-	-	-	-	-	-	-	-	-	-	-	Band_7
SX1_k127_1873155_0	1297865.APJD01000006_gene4340	0.0	1011.0	COG2303@1|root,COG2303@2|Bacteria,1MV19@1224|Proteobacteria,2TQKQ@28211|Alphaproteobacteria,3JWT5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	GMC oxidoreductase	-	-	1.1.99.1	ko:K00108	ko00260,ko01100,map00260,map01100	M00555	R01025	RC00087	ko00000,ko00001,ko00002,ko01000	-	-	-	GMC_oxred_C,GMC_oxred_N,NAD_binding_8
SX1_k127_1873155_2	1297865.APJD01000006_gene4341	6.22e-220	683.0	COG3347@1|root,COG3347@2|Bacteria,1N1X4@1224|Proteobacteria,2U26B@28211|Alphaproteobacteria,3JVI2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Class II Aldolase and Adducin N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Aldolase_II
SX1_k127_1873155_3	1297865.APJD01000006_gene4342	5.447e-181	576.0	COG0647@1|root,COG0647@2|Bacteria,1MU9Y@1224|Proteobacteria,2U87F@28211|Alphaproteobacteria,3JVUX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Haloacid dehalogenase-like hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_6,Hydrolase_like
SX1_k127_1873155_1	1297865.APJD01000006_gene4343	1.121e-224	697.0	COG1070@1|root,COG1070@2|Bacteria,1MW4A@1224|Proteobacteria,2TQX6@28211|Alphaproteobacteria,3JTAC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	FGGY family of carbohydrate kinases, C-terminal domain	-	-	2.7.1.17	ko:K00854	ko00040,ko01100,map00040,map01100	M00014	R01639	RC00002,RC00538	ko00000,ko00001,ko00002,ko01000	-	-	-	FGGY_C,FGGY_N
SX1_k127_1881340_0	1297865.APJD01000005_gene3845	0.0	1394.0	COG0045@1|root,COG1042@1|root,COG0045@2|Bacteria,COG1042@2|Bacteria,1MW98@1224|Proteobacteria,2TQYI@28211|Alphaproteobacteria,3JU7U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA binding domain	MA20_15065	-	-	-	-	-	-	-	-	-	-	-	ATP-grasp_5,CoA_binding_2,Succ_CoA_lig
SX1_k127_1881340_2	1230476.C207_01853	3.815e-147	467.0	COG1802@1|root,COG1802@2|Bacteria,1MXNF@1224|Proteobacteria,2U1PK@28211|Alphaproteobacteria,3JUTC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FCD	MA20_15070	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SX1_k127_1881340_1	1297865.APJD01000005_gene3843	0.0	1161.0	COG0028@1|root,COG0028@2|Bacteria,1MXDW@1224|Proteobacteria,2TT9X@28211|Alphaproteobacteria,3JRKI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Belongs to the TPP enzyme family	oxc	-	2.2.1.6,4.1.1.8	ko:K01577,ko:K01652	ko00290,ko00630,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00630,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R00006,R00014,R00226,R01908,R03050,R04672,R04673,R08648	RC00027,RC00106,RC00620,RC01192,RC02744,RC02893	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
SX1_k127_1881340_3	1230476.C207_01851	1.012e-123	397.0	COG1804@1|root,COG1804@2|Bacteria,1MU2K@1224|Proteobacteria,2TTM5@28211|Alphaproteobacteria,3JR50@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate	frc	-	2.8.3.16	ko:K07749	-	-	-	-	ko00000,ko01000	-	-	-	CoA_transf_3
SX1_k127_1887806_6	1297865.APJD01000006_gene4340	1.768e-31	123.0	COG2303@1|root,COG2303@2|Bacteria,1MV19@1224|Proteobacteria,2TQKQ@28211|Alphaproteobacteria,3JWT5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	GMC oxidoreductase	-	-	1.1.99.1	ko:K00108	ko00260,ko01100,map00260,map01100	M00555	R01025	RC00087	ko00000,ko00001,ko00002,ko01000	-	-	-	GMC_oxred_C,GMC_oxred_N,NAD_binding_8
SX1_k127_1887806_2	1297865.APJD01000006_gene4339	6.706e-238	736.0	COG3842@1|root,COG3842@2|Bacteria,1MU3I@1224|Proteobacteria,2TQQJ@28211|Alphaproteobacteria,3JXTJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ABC transporter	-	-	-	ko:K10112	ko02010,map02010	M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00491,M00602,M00605,M00606	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1	-	-	ABC_tran,TOBE_2
SX1_k127_1887806_4	1297865.APJD01000006_gene4338	1.455e-167	537.0	COG0561@1|root,COG0561@2|Bacteria,1R4WX@1224|Proteobacteria,2TSDR@28211|Alphaproteobacteria,3JWTT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	hydrolases of the HAD superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_3
SX1_k127_1887806_1	1297865.APJD01000006_gene4337	0.0	1017.0	COG1070@1|root,COG1070@2|Bacteria,1MW4A@1224|Proteobacteria,2TR7P@28211|Alphaproteobacteria,3JRNR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	FGGY family of carbohydrate kinases, N-terminal domain	-	-	2.7.1.17	ko:K00854	ko00040,ko01100,map00040,map01100	M00014	R01639	RC00002,RC00538	ko00000,ko00001,ko00002,ko01000	-	-	-	FGGY_C,FGGY_N
SX1_k127_1887806_0	1297865.APJD01000006_gene4336	0.0	1072.0	COG1653@1|root,COG1653@2|Bacteria,1R3Y9@1224|Proteobacteria,2VF3G@28211|Alphaproteobacteria,3K14Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Bacterial extracellular solute-binding protein	-	-	-	ko:K02027	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	SBP_bac_1,SBP_bac_8
SX1_k127_1887806_3	1297865.APJD01000006_gene4335	3.421e-181	571.0	COG0395@1|root,COG0395@2|Bacteria,1MVVT@1224|Proteobacteria,2TU85@28211|Alphaproteobacteria,3JW80@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02026,ko:K10229	ko02010,map02010	M00200,M00207	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1,3.A.1.1.5	-	-	BPD_transp_1
SX1_k127_1887806_5	1297865.APJD01000006_gene4334	1.014e-130	418.0	COG1175@1|root,COG1175@2|Bacteria,1MUVG@1224|Proteobacteria,2U2IC@28211|Alphaproteobacteria,3K2D9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02025	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	BPD_transp_1
SX1_k127_1896546_0	1297865.APJD01000033_gene6996	4.037e-210	654.0	COG0187@1|root,COG0187@2|Bacteria,1MVKT@1224|Proteobacteria,2TRBK@28211|Alphaproteobacteria,3JQQ2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	gyrB	-	5.99.1.3	ko:K02470	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim
SX1_k127_1896546_1	1297865.APJD01000033_gene6997	1.199e-164	522.0	COG3231@1|root,COG3231@2|Bacteria,1R9XT@1224|Proteobacteria,2U5X7@28211|Alphaproteobacteria,3K3X5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Phosphotransferase enzyme family	neo	-	2.7.1.95	ko:K19300	-	-	-	-	br01600,ko00000,ko01000,ko01504	-	-	-	APH
SX1_k127_1896546_2	1297865.APJD01000033_gene6998	1.36e-159	504.0	COG0766@1|root,COG0766@2|Bacteria,1MUH7@1224|Proteobacteria,2TRPH@28211|Alphaproteobacteria,3JVEC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine	murA	-	2.5.1.7	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	-	R00660	RC00350	ko00000,ko00001,ko01000,ko01011	-	-	-	EPSP_synthase
SX1_k127_1897945_3	1297865.APJD01000007_gene2056	8.276e-258	806.0	COG0683@1|root,COG0683@2|Bacteria,1NQT3@1224|Proteobacteria,2UQP0@28211|Alphaproteobacteria,3K3N9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_1897945_6	1297865.APJD01000007_gene2055	3.121e-203	635.0	COG2070@1|root,COG2070@2|Bacteria,1MU0U@1224|Proteobacteria,2TRZS@28211|Alphaproteobacteria,3JXCN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Nitronate monooxygenase	-	-	1.13.12.16	ko:K00459	ko00910,map00910	-	R00025	RC02541,RC02759	ko00000,ko00001,ko01000	-	-	-	NMO
SX1_k127_1897945_15	463191.SSEG_04615	5.199e-61	219.0	COG1024@1|root,COG1024@2|Bacteria,2GKJ6@201174|Actinobacteria	201174|Actinobacteria	I	Belongs to the enoyl-CoA hydratase isomerase family	-	-	4.2.1.149,4.2.1.17	ko:K01692,ko:K08299	ko00071,ko00280,ko00281,ko00310,ko00360,ko00362,ko00380,ko00410,ko00627,ko00640,ko00650,ko00903,ko00930,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00310,map00360,map00362,map00380,map00410,map00627,map00640,map00650,map00903,map00930,map01100,map01110,map01120,map01130,map01212	M00032,M00087	R03026,R03045,R04137,R04170,R04204,R04224,R04738,R04740,R04744,R04746,R04749,R05595,R06411,R06412,R06942,R08093,R10675	RC00831,RC00834,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
SX1_k127_1897945_9	1297865.APJD01000007_gene2053	8.397e-164	517.0	COG1028@1|root,COG1028@2|Bacteria,1MU32@1224|Proteobacteria,2TUYY@28211|Alphaproteobacteria,3JUT8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	-	GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
SX1_k127_1897945_1	1297865.APJD01000007_gene2052	0.0	1060.0	COG0318@1|root,COG0318@2|Bacteria,1QCB3@1224|Proteobacteria,2UPUU@28211|Alphaproteobacteria,3K3RB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_1897945_13	1230476.C207_00460	8.761e-121	389.0	COG1309@1|root,COG1309@2|Bacteria,1N6HV@1224|Proteobacteria,2UEX2@28211|Alphaproteobacteria,3K0FR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	BetI-type transcriptional repressor, C-terminal	-	-	-	-	-	-	-	-	-	-	-	-	TetR_C_6,TetR_N
SX1_k127_1897945_14	1230476.C207_00459	5.328e-71	242.0	COG1545@1|root,COG1545@2|Bacteria,1NEYJ@1224|Proteobacteria,2UT8K@28211|Alphaproteobacteria,3K4B5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	DUF35 OB-fold domain, acyl-CoA-associated	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1897945_4	1297865.APJD01000007_gene2049	1.651e-241	747.0	COG0183@1|root,COG0183@2|Bacteria,1R6QE@1224|Proteobacteria,2U227@28211|Alphaproteobacteria,3JVS0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Thiolase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Thiolase_C,Thiolase_N
SX1_k127_1897945_11	1297865.APJD01000007_gene2048	4.582e-130	417.0	COG1309@1|root,COG1309@2|Bacteria,1QYD4@1224|Proteobacteria,2TVBJ@28211|Alphaproteobacteria,3JX56@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_1897945_2	1297865.APJD01000007_gene2047	1.868e-290	893.0	COG1233@1|root,COG1233@2|Bacteria,1R4AC@1224|Proteobacteria,2U3UP@28211|Alphaproteobacteria,3JTFY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Flavin containing amine oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	Amino_oxidase
SX1_k127_1897945_7	1297865.APJD01000007_gene2046	9.991e-175	554.0	COG0410@1|root,COG0410@2|Bacteria,1R7N4@1224|Proteobacteria,2U23G@28211|Alphaproteobacteria,3JWQ9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ATPases associated with a variety of cellular activities	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran
SX1_k127_1897945_10	1230476.C207_00454	7.007e-159	509.0	COG0411@1|root,COG0411@2|Bacteria,1MUTY@1224|Proteobacteria,2TQK1@28211|Alphaproteobacteria,3JV6N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid ATP-binding cassette transporter	-	-	-	ko:K01995,ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C,BPD_transp_2
SX1_k127_1897945_0	1297865.APJD01000007_gene2044	0.0	1310.0	COG1022@1|root,COG1022@2|Bacteria,1MU4D@1224|Proteobacteria,2TSSI@28211|Alphaproteobacteria,3JWVW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	AMP-binding enzyme	-	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding
SX1_k127_1897945_8	1297865.APJD01000007_gene2043	1.53e-172	542.0	COG0559@1|root,COG0559@2|Bacteria,1QVG2@1224|Proteobacteria,2U1AS@28211|Alphaproteobacteria,3JVPH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	-	-	-	-	-	-	-	-	-	-	-	-	BPD_transp_2
SX1_k127_1897945_5	1297865.APJD01000007_gene2042	1.29e-207	666.0	COG4177@1|root,COG4177@2|Bacteria,1R6P2@1224|Proteobacteria,2U39B@28211|Alphaproteobacteria,3JUWC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	-	-	-	-	-	-	-	-	-	-	-	-	BPD_transp_2
SX1_k127_1897945_12	1297865.APJD01000007_gene2041	7.264e-121	389.0	COG0683@1|root,COG0683@2|Bacteria,1MWR8@1224|Proteobacteria,2U2YF@28211|Alphaproteobacteria,3JU92@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein domain	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_1901491_4	1297865.APJD01000006_gene4404	2.579e-20	91.0	COG3265@1|root,COG3265@2|Bacteria,1RHD0@1224|Proteobacteria,2UBQX@28211|Alphaproteobacteria,3JUIV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Shikimate kinase	-	-	2.7.1.12	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	-	R01737	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	AAA_33,SKI
SX1_k127_1901491_3	1297865.APJD01000006_gene4405	2.695e-162	511.0	COG0363@1|root,COG0363@2|Bacteria,1R5K6@1224|Proteobacteria,2U77K@28211|Alphaproteobacteria,3JSU9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase	pgl	-	2.7.1.12,3.1.1.31	ko:K00851,ko:K01057	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	M00004,M00006,M00008	R01737,R02035	RC00002,RC00017,RC00537	ko00000,ko00001,ko00002,ko01000	-	-	-	Glucosamine_iso
SX1_k127_1901491_1	1297865.APJD01000006_gene4406	0.0	1023.0	COG0364@1|root,COG0364@2|Bacteria,1MUN0@1224|Proteobacteria,2TQXA@28211|Alphaproteobacteria,3JTX7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone	zwf	-	1.1.1.363,1.1.1.49	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	M00004,M00006,M00008	R00835,R02736,R10907	RC00001,RC00066	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	G6PD_C,G6PD_N
SX1_k127_1901491_2	1297865.APJD01000006_gene4407	1.162e-214	676.0	COG1023@1|root,COG1023@2|Bacteria,1QU14@1224|Proteobacteria,2TT6S@28211|Alphaproteobacteria,3JUS2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	6-phosphogluconate dehydrogenase	gnd	-	1.1.1.343,1.1.1.44	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	M00004,M00006	R01528,R10221	RC00001,RC00539	ko00000,ko00001,ko00002,ko01000	-	-	-	6PGD,NAD_binding_2
SX1_k127_1901491_0	1297865.APJD01000006_gene4408	0.0	1695.0	COG0166@1|root,COG0176@1|root,COG0166@2|Bacteria,COG0176@2|Bacteria,1MUFP@1224|Proteobacteria,2TQKP@28211|Alphaproteobacteria,3JR2T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway	tal	-	2.2.1.2,5.3.1.9	ko:K01810,ko:K13810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00004,M00007,M00114	R01827,R02739,R02740,R03321	RC00376,RC00439,RC00563,RC00604	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	PGI,TAL_FSA
SX1_k127_191089_0	1297865.APJD01000014_gene877	1.632e-201	638.0	COG0604@1|root,COG0604@2|Bacteria,1MWRK@1224|Proteobacteria,2TQMF@28211|Alphaproteobacteria,3JU48@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Zinc-binding dehydrogenase	MA20_32380	-	1.6.5.5	ko:K00344	-	-	-	-	ko00000,ko01000	-	-	-	ADH_N,ADH_zinc_N
SX1_k127_191089_1	1297865.APJD01000014_gene878	2.124e-109	353.0	COG3917@1|root,COG3917@2|Bacteria,1RDNQ@1224|Proteobacteria,2VGB4@28211|Alphaproteobacteria,3JSB7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	2-hydroxychromene-2-carboxylate isomerase	MA20_32385	-	-	-	-	-	-	-	-	-	-	-	DSBA
SX1_k127_1913325_8	1230476.C207_00492	3.372e-39	148.0	COG0517@1|root,COG0517@2|Bacteria,1N0H3@1224|Proteobacteria,2UC0F@28211|Alphaproteobacteria,3JY3F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain in cystathionine beta-synthase and other proteins.	MA20_31615	-	-	-	-	-	-	-	-	-	-	-	CBS
SX1_k127_1913325_4	1297865.APJD01000014_gene810	4.379e-164	517.0	COG0705@1|root,COG0705@2|Bacteria,1MYFP@1224|Proteobacteria,2TSJG@28211|Alphaproteobacteria,3JSJH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Rhomboid family	MA20_31620	-	-	-	-	-	-	-	-	-	-	-	Rhomboid
SX1_k127_1913325_6	1297865.APJD01000014_gene811	2.825e-115	371.0	COG5388@1|root,COG5388@2|Bacteria,1MXF0@1224|Proteobacteria,2U3WI@28211|Alphaproteobacteria,3JUR4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PAS domain	MA20_31625	-	-	-	-	-	-	-	-	-	-	-	PAS_5
SX1_k127_1913325_1	1297865.APJD01000014_gene812	7.525e-231	717.0	COG2114@1|root,COG3850@1|root,COG2114@2|Bacteria,COG3850@2|Bacteria,1QW6N@1224|Proteobacteria,2TS3S@28211|Alphaproteobacteria,3JS4X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc,HAMP
SX1_k127_1913325_5	1297865.APJD01000014_gene812	7.161e-125	400.0	COG2114@1|root,COG3850@1|root,COG2114@2|Bacteria,COG3850@2|Bacteria,1QW6N@1224|Proteobacteria,2TS3S@28211|Alphaproteobacteria,3JS4X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc,HAMP
SX1_k127_1913325_2	1297865.APJD01000014_gene813	4.966e-212	665.0	28K34@1|root,2Z9SD@2|Bacteria,1REGR@1224|Proteobacteria,2U7DI@28211|Alphaproteobacteria,3K3YS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1913325_7	1297865.APJD01000014_gene814	4.718e-80	267.0	COG5485@1|root,COG5485@2|Bacteria,1RIK8@1224|Proteobacteria,2U9XV@28211|Alphaproteobacteria,3JYS4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SnoaL-like polyketide cyclase	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL
SX1_k127_1913325_0	1297865.APJD01000014_gene815	8.95e-239	741.0	COG1960@1|root,COG1960@2|Bacteria,1MXMQ@1224|Proteobacteria,2TRYH@28211|Alphaproteobacteria,3JWMP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_2,Acyl-CoA_dh_N
SX1_k127_1913325_3	1297865.APJD01000014_gene816	1.698e-207	647.0	COG1982@1|root,COG1982@2|Bacteria,1MWK4@1224|Proteobacteria,2TSSN@28211|Alphaproteobacteria,3JT6F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Orn/Lys/Arg decarboxylase, N-terminal domain	MA20_14975	-	4.1.1.17	ko:K01581	ko00330,ko00480,ko01100,ko01110,ko01130,map00330,map00480,map01100,map01110,map01130	M00134	R00670	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	OKR_DC_1,OKR_DC_1_C,OKR_DC_1_N
SX1_k127_1913686_1	1297865.APJD01000014_gene919	1.712e-219	682.0	COG2114@1|root,COG2114@2|Bacteria,1MY09@1224|Proteobacteria,2U2KA@28211|Alphaproteobacteria,3JTVH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	CHASE3,Guanylate_cyc
SX1_k127_1913686_0	1297865.APJD01000014_gene920	3.783e-236	732.0	COG0842@1|root,COG0842@2|Bacteria,1MW5R@1224|Proteobacteria,2TU59@28211|Alphaproteobacteria,3JTPV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	ABC-2 family transporter protein	MA20_09460	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_3
SX1_k127_1913686_2	1297865.APJD01000014_gene921	2.066e-80	267.0	COG1131@1|root,COG1131@2|Bacteria,1MUX3@1224|Proteobacteria,2TR2P@28211|Alphaproteobacteria,3JRVB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	AAA domain, putative AbiEii toxin, Type IV TA system	MA20_09455	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
SX1_k127_1915926_4	1297865.APJD01000012_gene1361	6.122e-118	380.0	COG1231@1|root,COG1231@2|Bacteria,1MWPH@1224|Proteobacteria,2U05G@28211|Alphaproteobacteria,3JW1P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Flavin containing amine oxidoreductase	-	-	1.4.3.4	ko:K00274	ko00260,ko00330,ko00340,ko00350,ko00360,ko00380,ko00950,ko00982,ko01100,ko01110,ko04726,ko04728,ko05030,ko05031,ko05034,map00260,map00330,map00340,map00350,map00360,map00380,map00950,map00982,map01100,map01110,map04726,map04728,map05030,map05031,map05034	M00135	R02173,R02382,R02529,R02532,R02613,R02908,R02919,R04025,R04300,R04674,R04890,R04893,R04894,R04907,R04908,R08346,R08347,R08348,R11354	RC00062,RC00160,RC00225,RC00676,RC00807,RC00808,RC01808,RC02226,RC02713	ko00000,ko00001,ko00002,ko01000	-	-	-	Amino_oxidase
SX1_k127_1915926_5	1297865.APJD01000012_gene1362	3.098e-77	258.0	COG3631@1|root,COG3631@2|Bacteria,1RD1I@1224|Proteobacteria,2U7YW@28211|Alphaproteobacteria,3JZ1X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_2
SX1_k127_1915926_1	1297865.APJD01000012_gene1363	4.166e-227	709.0	COG2771@1|root,COG2771@2|Bacteria,1MWC0@1224|Proteobacteria,2TU6G@28211|Alphaproteobacteria,3K5SX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE
SX1_k127_1915926_0	1297865.APJD01000012_gene1364	9.811e-308	947.0	COG3034@1|root,COG3034@2|Bacteria,1MXY6@1224|Proteobacteria,2TS2U@28211|Alphaproteobacteria,3JTHD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	ErfK YbiS YcfS YnhG family protein	-	-	-	-	-	-	-	-	-	-	-	-	YkuD
SX1_k127_1915926_3	1297865.APJD01000012_gene1365	2.614e-202	631.0	COG0825@1|root,COG0825@2|Bacteria,1MURN@1224|Proteobacteria,2TR6V@28211|Alphaproteobacteria,3JVAA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA	accA	-	2.1.3.15,6.4.1.2	ko:K01962	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742,R04386	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	ACCA
SX1_k127_1915926_2	1297865.APJD01000012_gene1366	4.64e-210	654.0	COG4974@1|root,COG4974@2|Bacteria,1MVNF@1224|Proteobacteria,2TRAA@28211|Alphaproteobacteria,3JSQM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Tyrosine recombinase XerD	xerD	-	-	ko:K04763	-	-	-	-	ko00000,ko03036	-	-	-	Phage_int_SAM_1,Phage_integrase
SX1_k127_1915926_6	1297865.APJD01000012_gene1367	6.49e-22	95.0	2EGFM@1|root,33A7M@2|Bacteria,1N8GQ@1224|Proteobacteria,2UG7D@28211|Alphaproteobacteria,3K0XF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_39815	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1924540_2	392499.Swit_2333	1.58e-34	138.0	COG0271@1|root,COG0271@2|Bacteria,1MZG5@1224|Proteobacteria,2UF6U@28211|Alphaproteobacteria,2K60E@204457|Sphingomonadales	204457|Sphingomonadales	T	Belongs to the BolA IbaG family	-	-	-	ko:K05527	-	-	-	-	ko00000,ko03000	-	-	-	BolA
SX1_k127_1924540_1	745310.G432_05700	6.177e-84	282.0	COG2214@1|root,COG2214@2|Bacteria,1MXTG@1224|Proteobacteria,2TRZH@28211|Alphaproteobacteria,2K4VC@204457|Sphingomonadales	204457|Sphingomonadales	O	molecular chaperone	-	-	-	-	-	-	-	-	-	-	-	-	DnaJ
SX1_k127_1924540_0	1123269.NX02_25805	1.098e-197	619.0	COG0714@1|root,COG0714@2|Bacteria,1MXIW@1224|Proteobacteria,2TS1Z@28211|Alphaproteobacteria,2K0S6@204457|Sphingomonadales	204457|Sphingomonadales	S	Aerobic cobaltochelatase subunit CobS	-	-	6.6.1.2	ko:K09882	ko00860,ko01100,map00860,map01100	-	R05227	RC02000	ko00000,ko00001,ko01000	-	-	-	AAA_5,CbbQ_C,CobS_N
SX1_k127_1924540_3	685778.AORL01000025_gene66	2.158e-17	87.0	COG4547@1|root,COG4547@2|Bacteria,1MX11@1224|Proteobacteria,2TS4N@28211|Alphaproteobacteria,2JZUK@204457|Sphingomonadales	204457|Sphingomonadales	H	Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide 5, 6-dimethylbenzimidazole phosphoribosyltransferase)	-	-	6.6.1.2	ko:K09883	ko00860,ko01100,map00860,map01100	-	R05227	RC02000	ko00000,ko00001,ko01000	-	-	-	CobT,CobT_C
SX1_k127_1927098_10	1297865.APJD01000008_gene5615	2.917e-118	380.0	COG1868@1|root,COG1868@2|Bacteria,1MX01@1224|Proteobacteria,2TR4F@28211|Alphaproteobacteria,3JRPA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation	fliM	-	-	ko:K02416	ko02030,ko02040,map02030,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FliM,FliMN_C
SX1_k127_1927098_13	1297865.APJD01000008_gene5614	4.62e-76	257.0	2A6BI@1|root,30V4A@2|Bacteria,1RAJ5@1224|Proteobacteria,2U5D4@28211|Alphaproteobacteria,3JY0B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_08455	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1927098_7	1297865.APJD01000008_gene5613	2.815e-157	498.0	COG3334@1|root,COG3334@2|Bacteria,1RKF6@1224|Proteobacteria,2TRR1@28211|Alphaproteobacteria,3JTXB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PFAM MgtE intracellular	MA20_08460	-	-	-	-	-	-	-	-	-	-	-	MgtE_N
SX1_k127_1927098_14	1297865.APJD01000008_gene5612	5.184e-53	192.0	COG3093@1|root,COG3093@2|Bacteria,1N76J@1224|Proteobacteria,2UFXF@28211|Alphaproteobacteria,3K0DJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Helix-turn-helix	higA	-	-	ko:K07334,ko:K21498	-	-	-	-	ko00000,ko02048	-	-	-	HTH_3
SX1_k127_1927098_17	1038859.AXAU01000012_gene4260	1.633e-44	162.0	COG3549@1|root,COG3549@2|Bacteria,1MZKX@1224|Proteobacteria,2UBQF@28211|Alphaproteobacteria,3K08T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	RelE-like toxin of type II toxin-antitoxin system HigB	-	-	-	ko:K07334	-	-	-	-	ko00000,ko02048	-	-	-	HigB-like_toxin
SX1_k127_1927098_0	1297865.APJD01000008_gene5610	0.0	2376.0	COG0457@1|root,COG0457@2|Bacteria,1N09H@1224|Proteobacteria,2TSKT@28211|Alphaproteobacteria,3JS1S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1927098_5	1297865.APJD01000008_gene5609	7.508e-181	567.0	COG0466@1|root,COG1680@1|root,COG0466@2|Bacteria,COG1680@2|Bacteria,1QWJF@1224|Proteobacteria,2TWZH@28211|Alphaproteobacteria,3K6QB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	OV	Domain of unknown function (DUF3471)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3471
SX1_k127_1927098_15	172088.AUGA01000011_gene2652	5.252e-52	186.0	2AB3R@1|root,310HR@2|Bacteria,1MZK6@1224|Proteobacteria,2UC1I@28211|Alphaproteobacteria,3K0F6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1927098_4	1297865.APJD01000008_gene5607	8.95e-193	603.0	COG0583@1|root,COG0583@2|Bacteria,1MUNN@1224|Proteobacteria,2VEUG@28211|Alphaproteobacteria,3JQM6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR substrate binding domain	MA20_07850	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_1927098_8	1297865.APJD01000008_gene5606	4.418e-146	465.0	COG1028@1|root,COG1028@2|Bacteria,1MUWP@1224|Proteobacteria,2TUTV@28211|Alphaproteobacteria,3JS9J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_1927098_16	1297865.APJD01000008_gene5605	5.59e-45	163.0	COG1942@1|root,COG1942@2|Bacteria,1N6WW@1224|Proteobacteria,2UBZW@28211|Alphaproteobacteria,3K0FY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tautomerase enzyme	MA20_07840	-	5.3.2.6	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	M00569	R03966,R05389	RC01040,RC01355	ko00000,ko00001,ko00002,ko01000	-	-	-	Tautomerase
SX1_k127_1927098_1	1297865.APJD01000008_gene5604	1.227e-253	785.0	COG0477@1|root,COG2814@2|Bacteria,1MW6T@1224|Proteobacteria,2U1KC@28211|Alphaproteobacteria,3JX5D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Uncharacterised MFS-type transporter YbfB	MA20_07835	-	-	-	-	-	-	-	-	-	-	-	MFS_4
SX1_k127_1927098_19	319003.Bra1253DRAFT_06100	2.289e-06	59.0	2ACCG@1|root,311XQ@2|Bacteria,1N2IH@1224|Proteobacteria,2UCXM@28211|Alphaproteobacteria,3K05X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1927098_2	1297865.APJD01000008_gene5603	1.259e-250	774.0	COG0520@1|root,COG0520@2|Bacteria,1QU0N@1224|Proteobacteria,2TW6K@28211|Alphaproteobacteria,3JTWT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Aminotransferase class-V	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_5
SX1_k127_1927098_3	1297865.APJD01000008_gene5602	5.865e-199	620.0	COG0346@1|root,COG0346@2|Bacteria,1MX75@1224|Proteobacteria,2TRQS@28211|Alphaproteobacteria,3JUA0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	lactoylglutathione lyase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1927098_9	1230476.C207_00758	8.593e-141	452.0	COG1338@1|root,COG1338@2|Bacteria,1MVBU@1224|Proteobacteria,2TT93@28211|Alphaproteobacteria,3JRCE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Plays a role in the flagellum-specific transport system	fliP	-	-	ko:K02419	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2	-	-	FliP
SX1_k127_1927098_6	1297865.APJD01000008_gene5600	3.08e-176	555.0	COG3115@1|root,COG3115@2|Bacteria,1N9KJ@1224|Proteobacteria,2TUCT@28211|Alphaproteobacteria,3JSXR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Flagellar biosynthesis protein, FliO	-	-	-	-	-	-	-	-	-	-	-	-	FliO
SX1_k127_1927098_11	1297865.APJD01000008_gene5599	3.741e-83	277.0	COG1815@1|root,COG1815@2|Bacteria,1N1G1@1224|Proteobacteria,2UCJ4@28211|Alphaproteobacteria,3JY2R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body	flgB	-	-	ko:K02387	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flg_bb_rod
SX1_k127_1927098_12	1230476.C207_00755	2.523e-82	274.0	COG1558@1|root,COG1558@2|Bacteria,1RHI3@1224|Proteobacteria,2U94I@28211|Alphaproteobacteria,3JY7J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Belongs to the flagella basal body rod proteins family	flgC	-	-	ko:K02388	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flg_bb_rod,Flg_bbr_C
SX1_k127_1927098_18	1297865.APJD01000008_gene5597	6.682e-27	109.0	COG1677@1|root,COG1677@2|Bacteria,1QFE1@1224|Proteobacteria,2V5VZ@28211|Alphaproteobacteria,3JZEN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Flagellar hook-basal body complex protein FliE	fliE	-	-	ko:K02408	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FliE
SX1_k127_1929093_0	1297865.APJD01000036_gene1421	0.0	1232.0	COG1289@1|root,COG1289@2|Bacteria,1MX9H@1224|Proteobacteria,2TV5R@28211|Alphaproteobacteria,3JTZM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Fusaric acid resistance	-	-	-	-	-	-	-	-	-	-	-	-	FUSC
SX1_k127_1929093_1	1297865.APJD01000036_gene1422	3.303e-94	310.0	COG1846@1|root,COG1846@2|Bacteria,1N78T@1224|Proteobacteria,2UFV6@28211|Alphaproteobacteria,3JY4K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	ko:K06075	-	-	-	-	ko00000,ko03000	-	-	-	HTH_27,MarR,MarR_2
SX1_k127_1946115_1	1297865.APJD01000047_gene4816	1.118e-181	569.0	COG2271@1|root,COG2271@2|Bacteria,1MVPS@1224|Proteobacteria,2TTHW@28211|Alphaproteobacteria,3K2J8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_1946115_0	1297865.APJD01000047_gene4815	1.281e-185	582.0	COG0281@1|root,COG0281@2|Bacteria,1MU0A@1224|Proteobacteria,2TQJT@28211|Alphaproteobacteria,3JT6H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Malic enzyme, NAD binding domain	-	-	1.1.1.38	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	-	R00214	RC00105	ko00000,ko00001,ko01000	-	-	-	Malic_M,malic
SX1_k127_1950074_5	1297865.APJD01000014_gene952	3.951e-142	451.0	28NA5@1|root,2ZBDZ@2|Bacteria,1MXY5@1224|Proteobacteria,2TYZX@28211|Alphaproteobacteria,3JRJ1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_09280	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1950074_7	1230476.C207_00635	1.681e-118	384.0	2E53F@1|root,32ZWJ@2|Bacteria,1N6KB@1224|Proteobacteria,2TSI3@28211|Alphaproteobacteria,3JR3D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_09285	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1950074_6	398525.KB900701_gene5982	9.371e-122	391.0	COG1309@1|root,COG1309@2|Bacteria,1R44G@1224|Proteobacteria,2TTF0@28211|Alphaproteobacteria,3JRTR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	MA20_09250	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_1950074_3	1297865.APJD01000014_gene949	2.466e-159	503.0	COG0639@1|root,COG0639@2|Bacteria,1MUV1@1224|Proteobacteria,2TSFT@28211|Alphaproteobacteria,3JSJA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Calcineurin-like phosphoesterase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos_2
SX1_k127_1950074_0	1297865.APJD01000014_gene948	1e-323	992.0	COG0515@1|root,COG0589@1|root,COG0515@2|Bacteria,COG0589@2|Bacteria,1MV1P@1224|Proteobacteria,2TQTS@28211|Alphaproteobacteria,3JSWF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KLT	Serine threonine protein kinase	MA20_09295	-	-	-	-	-	-	-	-	-	-	-	Pkinase,Usp
SX1_k127_1950074_4	1297865.APJD01000014_gene947	1.402e-145	467.0	COG0036@1|root,COG0036@2|Bacteria,1MUZM@1224|Proteobacteria,2TQKR@28211|Alphaproteobacteria,3JR4Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Belongs to the ribulose-phosphate 3-epimerase family	rpe	-	5.1.3.1	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007	R01529	RC00540	ko00000,ko00001,ko00002,ko01000	-	-	-	Ribul_P_3_epim
SX1_k127_1950074_8	172088.AUGA01000020_gene3610	8.788e-105	349.0	COG5126@1|root,COG5126@2|Bacteria,1R6G5@1224|Proteobacteria,2U0AR@28211|Alphaproteobacteria,3JWI8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	DTZ	EF-hand domain pair	-	-	-	-	-	-	-	-	-	-	-	-	EF-hand_5,EF-hand_6,EF-hand_7
SX1_k127_1950074_2	1297865.APJD01000014_gene944	3.21e-199	645.0	COG3191@1|root,COG3191@2|Bacteria,1MWDP@1224|Proteobacteria,2TRDC@28211|Alphaproteobacteria,3JUMH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EQ	Peptidase family S58	dmpA	-	3.4.11.19	ko:K01266	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_S58
SX1_k127_1950074_1	1297865.APJD01000014_gene943	3.679e-238	741.0	COG0683@1|root,COG0683@2|Bacteria,1MWJ1@1224|Proteobacteria,2TT0T@28211|Alphaproteobacteria,3JR5R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	livK	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_1950074_9	1297865.APJD01000014_gene942	1.299e-80	269.0	COG0410@1|root,COG0410@2|Bacteria,1MVVC@1224|Proteobacteria,2TR61@28211|Alphaproteobacteria,3JUTM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ABC transporter	livF	-	-	ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran
SX1_k127_1952619_1	1297865.APJD01000001_gene5905	1.188e-79	265.0	COG1509@1|root,COG1509@2|Bacteria,1MUPJ@1224|Proteobacteria,2TT31@28211|Alphaproteobacteria,3JQS7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Lysine-2,3-aminomutase	kamA	-	5.4.3.2	ko:K01843	ko00310,map00310	-	R00461	RC00303	ko00000,ko00001,ko01000	-	-	-	Fer4_12,Fer4_14,LAM_C,Radical_SAM
SX1_k127_1952619_2	1297865.APJD01000001_gene5904	1.197e-37	145.0	2DHZ0@1|root,301EV@2|Bacteria,1N7IF@1224|Proteobacteria,2UFWB@28211|Alphaproteobacteria,3K0XQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1952619_3	1230476.C207_01397	3.522e-37	144.0	2C1E2@1|root,2ZZIG@2|Bacteria,1N0II@1224|Proteobacteria,2UCRN@28211|Alphaproteobacteria,3K067@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1952619_0	1297865.APJD01000001_gene5903	1.85e-196	613.0	COG0722@1|root,COG0722@2|Bacteria,1MU5Q@1224|Proteobacteria,2TUJX@28211|Alphaproteobacteria,3JUN0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)	aroG	GO:0003674,GO:0003824,GO:0003849,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019438,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.5.1.54	ko:K01626	ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024	M00022	R01826	RC00435	ko00000,ko00001,ko00002,ko01000	-	-	-	DAHP_synth_1
SX1_k127_195746_1	1297865.APJD01000049_gene5522	2.647e-120	389.0	COG3619@1|root,COG3619@2|Bacteria,1N3T5@1224|Proteobacteria,2U3H0@28211|Alphaproteobacteria,3JS0V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1275)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1275
SX1_k127_195746_0	1230476.C207_06110	0.0	1311.0	COG0480@1|root,COG0480@2|Bacteria,1MU2W@1224|Proteobacteria,2TYVK@28211|Alphaproteobacteria,3JQUI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	elongation factor G	MA20_05220	-	-	ko:K02355	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2
SX1_k127_1960076_2	1297865.APJD01000014_gene658	4.059e-123	395.0	COG0120@1|root,COG0120@2|Bacteria,1MVGR@1224|Proteobacteria,2TU68@28211|Alphaproteobacteria,3JTM0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate	rpiA	-	5.3.1.6	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167,M00580	R01056	RC00434	ko00000,ko00001,ko00002,ko01000	-	-	-	Rib_5-P_isom_A
SX1_k127_1960076_0	1297865.APJD01000014_gene659	2.197e-160	507.0	COG4221@1|root,COG4221@2|Bacteria,1MVYG@1224|Proteobacteria,2TSTP@28211|Alphaproteobacteria,3JU6V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_1960076_1	1297865.APJD01000014_gene660	3.393e-137	438.0	COG0546@1|root,COG0546@2|Bacteria,1RDDY@1224|Proteobacteria,2U79T@28211|Alphaproteobacteria,3JVBQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress	gph	-	3.1.3.18	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	-	R01334	RC00017	ko00000,ko00001,ko01000	-	-	-	HAD_2
SX1_k127_1960076_3	1297865.APJD01000014_gene661	1.343e-77	263.0	2C6J4@1|root,2ZDBZ@2|Bacteria,1RHUG@1224|Proteobacteria,2U9TF@28211|Alphaproteobacteria,3JYMH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	PEGA
SX1_k127_1960076_4	398525.KB900701_gene4236	0.0008285	47.0	COG2896@1|root,COG2896@2|Bacteria,1MW3W@1224|Proteobacteria,2TQQP@28211|Alphaproteobacteria,3JR01@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate	moaA	-	4.1.99.22	ko:K03639	ko00790,ko01100,ko04122,map00790,map01100,map04122	-	R09394	RC03420	ko00000,ko00001,ko01000	-	-	-	Fer4_12,Mob_synth_C,Radical_SAM
SX1_k127_1964505_5	1297865.APJD01000006_gene4701	9.844e-29	114.0	2A68Q@1|root,30V1B@2|Bacteria,1R6U2@1224|Proteobacteria,2U164@28211|Alphaproteobacteria,3JXKK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1964505_2	189753.AXAS01000003_gene4759	2.554e-202	640.0	COG0534@1|root,COG0534@2|Bacteria,1MVRV@1224|Proteobacteria,2TSMQ@28211|Alphaproteobacteria,3JT42@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	MatE	-	-	-	-	-	-	-	-	-	-	-	-	MatE
SX1_k127_1964505_4	1304877.KI519400_gene1437	1.333e-76	261.0	2A68Q@1|root,30V1B@2|Bacteria,1R6U2@1224|Proteobacteria,2U164@28211|Alphaproteobacteria,3JXKK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1964505_3	1297865.APJD01000006_gene4700	4.519e-202	631.0	COG0715@1|root,COG0715@2|Bacteria,1MV9S@1224|Proteobacteria,2TTIU@28211|Alphaproteobacteria,3JTNG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ABC transporter, phosphonate, periplasmic substrate-binding protein	-	-	-	ko:K02051,ko:K15553	ko00920,ko02010,map00920,map02010	M00188,M00436	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.16,3.A.1.17,3.A.1.17.2	-	-	NMT1,NMT1_2
SX1_k127_1964505_6	1230476.C207_04811	6.488e-25	109.0	2EQ0D@1|root,2ZRDS@2|Bacteria,1NBWW@1224|Proteobacteria,2UGS4@28211|Alphaproteobacteria,3K15S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1964505_1	1230476.C207_04812	6.737e-305	940.0	COG2031@1|root,COG2031@2|Bacteria,1MV5A@1224|Proteobacteria,2U2JY@28211|Alphaproteobacteria,3JTWM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Short chain fatty acid transporter	-	-	-	ko:K02106	ko02020,map02020	-	-	-	ko00000,ko00001	2.A.73.1	-	-	SCFA_trans
SX1_k127_1964505_0	1297865.APJD01000006_gene4698	0.0	1328.0	COG0243@1|root,COG1018@1|root,COG0243@2|Bacteria,COG1018@2|Bacteria,1NR6J@1224|Proteobacteria,2VF1V@28211|Alphaproteobacteria,3JQQ6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Molydopterin dinucleotide binding domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_6,Fer2,Molybdop_Fe4S4,Molybdopterin,Molydop_binding,NAD_binding_1
SX1_k127_1965718_3	172088.AUGA01000005_gene7823	1.68e-39	146.0	COG0247@1|root,COG0247@2|Bacteria,1MWTK@1224|Proteobacteria,2TR9H@28211|Alphaproteobacteria,3JSJD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cysteine-rich domain	glcF	-	-	ko:K11473	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	-	R00475	RC00042	ko00000,ko00001	-	-	-	CCG,Fer4_7
SX1_k127_1965718_2	1297865.APJD01000009_gene2905	6.112e-208	647.0	2DQY9@1|root,339CR@2|Bacteria,1NR8Y@1224|Proteobacteria,2U152@28211|Alphaproteobacteria,3JSVQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bacterial protein of unknown function (Gcw_chp)	-	-	-	-	-	-	-	-	-	-	-	-	Gcw_chp
SX1_k127_1965718_0	1297865.APJD01000009_gene2904	0.0	1146.0	COG4178@1|root,COG4178@2|Bacteria,1MW09@1224|Proteobacteria,2TS9Q@28211|Alphaproteobacteria,3JQVA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	ABC transporter	-	-	-	ko:K02471	ko02010,map02010	-	-	-	ko00000,ko00001,ko02000	3.A.1.203.11,3.A.1.203.4	-	-	ABC_membrane_2,ABC_tran
SX1_k127_1965718_1	1297865.APJD01000009_gene2903	0.0	1089.0	COG1620@1|root,COG1620@2|Bacteria,1MV13@1224|Proteobacteria,2TQY1@28211|Alphaproteobacteria,3JT7Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	L-lactate permease	glcA	-	-	ko:K03303	-	-	-	-	ko00000,ko02000	2.A.14	-	-	Lactate_perm
SX1_k127_1965718_4	1230476.C207_06408	4.219e-09	68.0	COG3187@1|root,COG3187@2|Bacteria,1RGWB@1224|Proteobacteria,2U9ZH@28211|Alphaproteobacteria,3JZRF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	META domain	MA20_05910	-	-	-	-	-	-	-	-	-	-	-	META
SX1_k127_1975412_3	1230476.C207_04137	1.354e-148	473.0	COG1073@1|root,COG1073@2|Bacteria,1QWJW@1224|Proteobacteria,2TT45@28211|Alphaproteobacteria,3JSX1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	alpha/beta hydrolase fold	MA20_36090	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Chlorophyllase2,Hydrolase_4
SX1_k127_1975412_2	1297865.APJD01000010_gene4898	1.704e-164	529.0	COG1396@1|root,COG1396@2|Bacteria,1MUG2@1224|Proteobacteria,2TR3R@28211|Alphaproteobacteria,3JW2Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Helix-turn-helix XRE-family like proteins	-	-	-	-	-	-	-	-	-	-	-	-	HTH_31
SX1_k127_1975412_1	1297865.APJD01000010_gene4897	1.717e-239	740.0	COG0604@1|root,COG0604@2|Bacteria,1QWJV@1224|Proteobacteria,2TX01@28211|Alphaproteobacteria,3JRM5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Alcohol dehydrogenase GroES-like domain	-	-	1.1.1.1	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	-	R00623,R00754,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310	RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_zinc_N
SX1_k127_1975412_0	1297865.APJD01000010_gene4896	0.0	1182.0	COG0793@1|root,COG1680@1|root,COG0793@2|Bacteria,COG1680@2|Bacteria,1MVPR@1224|Proteobacteria,2U0IV@28211|Alphaproteobacteria,3JVVE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,PDZ_2
SX1_k127_1976120_6	1297865.APJD01000024_gene392	2.638e-85	286.0	COG0662@1|root,COG1396@1|root,COG0662@2|Bacteria,COG1396@2|Bacteria,1RCYA@1224|Proteobacteria,2TU8R@28211|Alphaproteobacteria,3JS1A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Helix-turn-helix domain	MA20_09770	-	-	-	-	-	-	-	-	-	-	-	Cupin_2,HTH_3,HTH_31
SX1_k127_1976120_1	1297865.APJD01000024_gene391	5.452e-297	917.0	COG0161@1|root,COG0161@2|Bacteria,1MU2N@1224|Proteobacteria,2TQND@28211|Alphaproteobacteria,3JRVX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	MA20_09775	-	2.6.1.18	ko:K00822	ko00280,ko00410,ko00640,ko01100,map00280,map00410,map00640,map01100	-	R00907,R04187	RC00008,RC00062,RC00160	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_3
SX1_k127_1976120_2	1297865.APJD01000024_gene390	6.343e-282	866.0	COG0665@1|root,COG0665@2|Bacteria,1MVIZ@1224|Proteobacteria,2TRT9@28211|Alphaproteobacteria,3JV4Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Oxidative deamination of D-amino acids	dadA	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0008150,GO:0008152,GO:0008718,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009987,GO:0016020,GO:0016054,GO:0016491,GO:0016638,GO:0019478,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046144,GO:0046395,GO:0046416,GO:0046436,GO:0055114,GO:0055130,GO:0071704,GO:0071944,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606	1.4.5.1	ko:K00285	ko00360,map00360	-	R01374,R09493	RC00006,RC00025	ko00000,ko00001,ko01000	-	-	-	DAO
SX1_k127_1976120_5	1297865.APJD01000024_gene389	2.279e-137	439.0	COG2186@1|root,COG2186@2|Bacteria,1MY1K@1224|Proteobacteria,2U67X@28211|Alphaproteobacteria,3K0MB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FCD	-	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SX1_k127_1976120_4	1297865.APJD01000024_gene388	4.414e-248	770.0	COG2271@1|root,COG2271@2|Bacteria,1MWYR@1224|Proteobacteria,2TSXW@28211|Alphaproteobacteria,3JTZP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Transmembrane secretion effector	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_1976120_3	1297865.APJD01000024_gene387	1.245e-260	802.0	COG1680@1|root,COG1680@2|Bacteria,1QD0J@1224|Proteobacteria,2U535@28211|Alphaproteobacteria,3K2NM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SX1_k127_1976120_0	1297865.APJD01000024_gene386	0.0	1097.0	COG0654@1|root,COG0654@2|Bacteria,1MUN4@1224|Proteobacteria,2TRHJ@28211|Alphaproteobacteria,3JW9N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	FAD binding domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3
SX1_k127_1976120_7	1297865.APJD01000024_gene385	8.423e-54	189.0	COG1917@1|root,COG1917@2|Bacteria,1RH1R@1224|Proteobacteria,2UBCW@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Cupin 2, conserved barrel domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_1977378_5	448385.sce2401	1.423e-12	71.0	COG2192@1|root,COG2192@2|Bacteria,1MWBA@1224|Proteobacteria,42N15@68525|delta/epsilon subdivisions,2WJ0Y@28221|Deltaproteobacteria,2Z0J7@29|Myxococcales	28221|Deltaproteobacteria	H	Carbamoyltransferase C-terminus	-	-	-	ko:K00612	-	-	-	-	ko00000,ko01000	-	-	-	Carbam_trans_C,Carbam_trans_N
SX1_k127_1977378_2	1297865.APJD01000001_gene5974	1.892e-192	601.0	COG0697@1|root,COG0697@2|Bacteria,1MZQM@1224|Proteobacteria,2TUPG@28211|Alphaproteobacteria,3JS7M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_1977378_6	224911.27352803	1.481e-09	60.0	COG1173@1|root,COG1173@2|Bacteria,1MWP1@1224|Proteobacteria,2TSUG@28211|Alphaproteobacteria,3JR90@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Binding-protein-dependent transport system inner membrane component	MA20_13270	-	-	ko:K02034	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
SX1_k127_1977378_3	1297865.APJD01000001_gene5975	1.389e-171	540.0	COG2084@1|root,COG2084@2|Bacteria,1P0X0@1224|Proteobacteria,2TXTS@28211|Alphaproteobacteria,3JS04@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase	MA20_29235	-	1.1.1.31	ko:K00020	ko00280,ko01100,map00280,map01100	-	R05066	RC00099	ko00000,ko00001,ko01000	-	-	-	NAD_binding_11,NAD_binding_2
SX1_k127_1977378_1	652103.Rpdx1_3058	8.59e-213	662.0	COG1186@1|root,COG1186@2|Bacteria,1MUAW@1224|Proteobacteria,2TR9V@28211|Alphaproteobacteria,3JUE0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA	prfB	-	-	ko:K02836	-	-	-	-	ko00000,ko03012	-	-	-	PCRF,RF-1
SX1_k127_1977378_0	1297865.APJD01000001_gene5977	0.0	1680.0	COG5009@1|root,COG5009@2|Bacteria,1MU5A@1224|Proteobacteria,2USBB@28211|Alphaproteobacteria,3JRJK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Penicillin-binding protein OB-like domain	mrcA	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	PCB_OB,Transgly,Transpeptidase
SX1_k127_1977378_7	261292.Nit79A3_1973	0.0004742	44.0	COG0642@1|root,COG2205@2|Bacteria,1MUZQ@1224|Proteobacteria,2VH62@28216|Betaproteobacteria	28216|Betaproteobacteria	T	Histidine kinase	kdpD	-	2.7.13.3	ko:K07646	ko02020,map02020	M00454	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	DUF4118,GAF_3,HATPase_c,HisKA,KdpD
SX1_k127_1977378_4	1297865.APJD01000001_gene5978	1.087e-55	195.0	COG0860@1|root,COG0860@2|Bacteria,1MUQK@1224|Proteobacteria,2U0K2@28211|Alphaproteobacteria,3JSWS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Ami_3	amiC	-	3.5.1.28	ko:K01448	ko01503,map01503	M00727	R04112	RC00064,RC00141	ko00000,ko00001,ko00002,ko01000,ko01011,ko03036	-	-	-	AMIN,Amidase_3
SX1_k127_2001830_1	868595.Desca_2612	4.097e-64	225.0	COG1682@1|root,COG1682@2|Bacteria,1V1J2@1239|Firmicutes,25B57@186801|Clostridia	186801|Clostridia	GM	Transport permease protein	pyrL	-	-	ko:K01992,ko:K09690	ko02010,map02010	M00250,M00254	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1,3.A.1.103	-	-	ABC2_membrane
SX1_k127_2001830_0	1300345.LF41_6	5.104e-145	475.0	COG1134@1|root,COG1134@2|Bacteria,1MWWC@1224|Proteobacteria,1RN2T@1236|Gammaproteobacteria,1X35Q@135614|Xanthomonadales	135614|Xanthomonadales	GM	ABC-type polysaccharide polyol phosphate transport system, ATPase component	wzt	-	-	ko:K09691	ko02010,map02010	M00250	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.103	-	-	ABC_tran,Wzt_C
SX1_k127_200198_0	1297865.APJD01000012_gene1301	0.0	1080.0	COG4249@1|root,COG4249@2|Bacteria,1MXFD@1224|Proteobacteria,2TRW5@28211|Alphaproteobacteria,3JQPH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14
SX1_k127_200198_5	1297865.APJD01000012_gene1300	7.447e-70	244.0	2CFZD@1|root,34B4A@2|Bacteria,1RIU6@1224|Proteobacteria,2UCSA@28211|Alphaproteobacteria,3K0E4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_200198_3	172088.AUGA01000006_gene8127	4.281e-82	279.0	COG3791@1|root,COG3791@2|Bacteria,1N031@1224|Proteobacteria,2U764@28211|Alphaproteobacteria,3JXS7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Glutathione-dependent formaldehyde-activating enzyme	-	-	-	-	-	-	-	-	-	-	-	-	GFA
SX1_k127_200198_4	1230476.C207_03754	5.927e-73	246.0	2AK6F@1|root,31AWH@2|Bacteria,1QW6W@1224|Proteobacteria,2TWQG@28211|Alphaproteobacteria,3JY6U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative lumazine-binding	MA20_23205	-	-	-	-	-	-	-	-	-	-	-	Lumazine_bd_2
SX1_k127_200198_1	1297865.APJD01000012_gene1297	0.0	1028.0	COG0025@1|root,COG0025@2|Bacteria,1MW5T@1224|Proteobacteria,2TSHB@28211|Alphaproteobacteria,3JRMP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Sodium/hydrogen exchanger family	MA20_23215	-	-	ko:K03316	-	-	-	-	ko00000	2.A.36	-	-	Na_H_Exchanger
SX1_k127_200198_2	1297865.APJD01000012_gene1296	2.041e-262	807.0	COG4638@1|root,COG4638@2|Bacteria,1MX47@1224|Proteobacteria,2TV03@28211|Alphaproteobacteria,3JTQC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rieske [2Fe-2S] domain	-	-	-	-	-	-	-	-	-	-	-	-	Rieske
SX1_k127_2006316_3	1297865.APJD01000002_gene4183	2.04e-167	526.0	COG0697@1|root,COG0697@2|Bacteria,1MXCD@1224|Proteobacteria,2TR27@28211|Alphaproteobacteria,3JRUH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	MA20_35690	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_2006316_1	1297865.APJD01000002_gene4182	6.617e-183	574.0	COG0727@1|root,COG0727@2|Bacteria,1RJ0V@1224|Proteobacteria,2U8AG@28211|Alphaproteobacteria,3JT3R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PFAM Uncharacterised protein family (UPF0153)	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2006316_0	1297865.APJD01000002_gene4181	2.86e-237	737.0	COG2807@1|root,COG2807@2|Bacteria,1MXGT@1224|Proteobacteria,2TVC9@28211|Alphaproteobacteria,3K284@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Major Facilitator Superfamily	-	-	-	ko:K03449	-	-	-	-	ko00000,ko02000	2.A.1.17	-	-	MFS_1
SX1_k127_2006316_2	1297865.APJD01000002_gene4180	1.343e-170	546.0	COG2207@1|root,COG2207@2|Bacteria,1NETZ@1224|Proteobacteria,2TU4R@28211|Alphaproteobacteria,3JW06@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	yeaM	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,HTH_18
SX1_k127_2008446_0	1297865.APJD01000020_gene239	2.044e-240	746.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,3JRAF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Putative diguanylate phosphodiesterase	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,MHYT,PAS_7,PAS_8,dCache_1
SX1_k127_2008446_2	1297865.APJD01000020_gene240	1.389e-24	104.0	COG3847@1|root,COG3847@2|Bacteria,1NBIR@1224|Proteobacteria,2UGAM@28211|Alphaproteobacteria,3K1HV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Flp/Fap pilin component	-	-	-	-	-	-	-	-	-	-	-	-	Flp_Fap
SX1_k127_2008446_1	1297865.APJD01000020_gene241	1.743e-35	136.0	COG0315@1|root,COG0315@2|Bacteria,1RCYZ@1224|Proteobacteria,2U747@28211|Alphaproteobacteria,3JR9A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)	moaC	-	4.6.1.17	ko:K03637	ko00790,ko01100,ko04122,map00790,map01100,map04122	-	R11372	RC03425	ko00000,ko00001,ko01000	-	-	-	MoaC
SX1_k127_2012663_2	1297865.APJD01000005_gene3677	9.204e-202	628.0	COG2303@1|root,COG2303@2|Bacteria,1MV19@1224|Proteobacteria,2TQKQ@28211|Alphaproteobacteria,3JSZ3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	GMC oxidoreductase	MA20_15975	-	1.1.99.1	ko:K00108	ko00260,ko01100,map00260,map01100	M00555	R01025	RC00087	ko00000,ko00001,ko00002,ko01000	-	-	-	GMC_oxred_C,GMC_oxred_N
SX1_k127_2012663_5	1297865.APJD01000005_gene3678	7.045e-156	498.0	COG0412@1|root,COG0412@2|Bacteria,1NKIB@1224|Proteobacteria,2U933@28211|Alphaproteobacteria,3JWI1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Dienelactone hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	DLH
SX1_k127_2012663_6	1297865.APJD01000005_gene3679	5.051e-83	276.0	28UEV@1|root,2ZGJV@2|Bacteria,1RFB7@1224|Proteobacteria,2U7NQ@28211|Alphaproteobacteria,3JYPJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2012663_1	1297865.APJD01000005_gene3680	6.443e-257	795.0	COG1473@1|root,COG1473@2|Bacteria,1MUIV@1224|Proteobacteria,2TR5B@28211|Alphaproteobacteria,3JRHP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	amidohydrolase	MA20_15970	-	-	-	-	-	-	-	-	-	-	-	M20_dimer,Peptidase_M20
SX1_k127_2012663_0	1297865.APJD01000005_gene3681	2.893e-258	799.0	COG2124@1|root,COG2124@2|Bacteria,1N0ID@1224|Proteobacteria,2TT7V@28211|Alphaproteobacteria,3JW04@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Cytochrome P450	-	-	-	ko:K21034	-	-	-	-	ko00000,ko00199	-	-	-	p450
SX1_k127_2012663_3	1297865.APJD01000005_gene3682	1.102e-195	610.0	COG0583@1|root,COG0583@2|Bacteria,1MV36@1224|Proteobacteria,2TVHU@28211|Alphaproteobacteria,3JTGW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	MA20_10350	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_2012663_4	1297865.APJD01000005_gene3683	3.012e-164	517.0	COG0306@1|root,COG0306@2|Bacteria,1MVXK@1224|Proteobacteria,2TU98@28211|Alphaproteobacteria,3JSN4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Phosphate transporter family	-	-	-	ko:K03306	-	-	-	-	ko00000	2.A.20	-	-	PHO4
SX1_k127_2016677_1	1297865.APJD01000003_gene6192	1.47e-85	284.0	2A6QQ@1|root,30VIR@2|Bacteria,1RA40@1224|Proteobacteria,2U5HH@28211|Alphaproteobacteria,3JYFX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2016677_0	1297865.APJD01000003_gene6191	4.608e-125	400.0	COG0353@1|root,COG0353@2|Bacteria,1MV9Q@1224|Proteobacteria,2TRZM@28211|Alphaproteobacteria,3JSDW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO	recR	-	-	ko:K06187	ko03440,map03440	-	-	-	ko00000,ko00001,ko03400	-	-	-	RecR,Toprim_4
SX1_k127_2016677_2	1297865.APJD01000003_gene6190	2.313e-58	203.0	COG0718@1|root,COG0718@2|Bacteria,1RGZD@1224|Proteobacteria,2UBQB@28211|Alphaproteobacteria,3JZDC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection	ybaB	-	-	ko:K09747	-	-	-	-	ko00000	-	-	-	YbaB_DNA_bd
SX1_k127_2016677_3	1297865.APJD01000003_gene6189	4.234e-58	203.0	COG2812@1|root,COG2812@2|Bacteria,1MVCK@1224|Proteobacteria,2TRPB@28211|Alphaproteobacteria,3JS32@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity	dnaX	-	2.7.7.7	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta2,DNA_pol3_gamma3,DUF3646
SX1_k127_2023846_0	1150626.PHAMO_270112	4.89e-183	584.0	COG0187@1|root,COG0187@2|Bacteria,1MVKT@1224|Proteobacteria,2TRBK@28211|Alphaproteobacteria,2JQ5A@204441|Rhodospirillales	204441|Rhodospirillales	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	gyrB	-	5.99.1.3	ko:K02470	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim
SX1_k127_2023846_1	1207063.P24_14794	9.478e-53	190.0	COG1195@1|root,COG1195@2|Bacteria,1MX8N@1224|Proteobacteria,2TQRD@28211|Alphaproteobacteria,2JP8E@204441|Rhodospirillales	204441|Rhodospirillales	L	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP	recF	-	-	ko:K03629	ko03440,map03440	-	-	-	ko00000,ko00001,ko03400	-	-	-	AAA_21,AAA_23,SMC_N
SX1_k127_2024091_5	1297865.APJD01000003_gene6083	4.573e-85	283.0	COG1408@1|root,COG1408@2|Bacteria,1MUH5@1224|Proteobacteria,2U0JR@28211|Alphaproteobacteria,3JWTF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Calcineurin-like phosphoesterase superfamily domain	-	-	-	ko:K07098	-	-	-	-	ko00000	-	-	-	Metallophos,Metallophos_2
SX1_k127_2024091_1	1297865.APJD01000003_gene6084	0.0	1169.0	COG2072@1|root,COG2072@2|Bacteria,1MUQH@1224|Proteobacteria,2TRG4@28211|Alphaproteobacteria,3JRSQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Flavin-binding monooxygenase-like	-	-	1.14.13.22	ko:K03379	ko00930,ko01120,ko01220,map00930,map01120,map01220	-	R02231,R06622	RC00662,RC01550	ko00000,ko00001,ko01000	-	-	-	FMO-like,Pyr_redox_3
SX1_k127_2024091_2	1297865.APJD01000003_gene6085	4.282e-256	790.0	COG0477@1|root,COG0477@2|Bacteria,1MXZ3@1224|Proteobacteria,2TWH9@28211|Alphaproteobacteria,3JTH3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Transmembrane secretion effector	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,MFS_3
SX1_k127_2024091_4	1297865.APJD01000003_gene6086	1.743e-147	467.0	COG2267@1|root,COG2267@2|Bacteria,1QU41@1224|Proteobacteria,2TVZU@28211|Alphaproteobacteria,3JUM8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
SX1_k127_2024091_6	1230476.C207_03954	3.154e-14	72.0	2A7SR@1|root,30WRT@2|Bacteria,1N1R6@1224|Proteobacteria,2UD1R@28211|Alphaproteobacteria,3K4BA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2024091_0	1230476.C207_03955	0.0	1213.0	COG0514@1|root,COG0514@2|Bacteria,1MVGG@1224|Proteobacteria,2TS8B@28211|Alphaproteobacteria,3JTFR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	RQC	recQ	GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005657,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008270,GO:0009295,GO:0009378,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017116,GO:0017117,GO:0030894,GO:0032392,GO:0032508,GO:0032991,GO:0032993,GO:0033202,GO:0033554,GO:0034641,GO:0042623,GO:0043138,GO:0043140,GO:0043142,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494,GO:1904949	3.6.4.12	ko:K03654	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,HRDC,Helicase_C,RQC,RecQ_Zn_bind
SX1_k127_2024091_3	1297865.APJD01000003_gene6088	4.097e-184	575.0	COG3673@1|root,COG3673@2|Bacteria,1NFRW@1224|Proteobacteria,2TQTY@28211|Alphaproteobacteria,3JQQX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized alpha/beta hydrolase domain (DUF2235)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2235
SX1_k127_2033059_1	1297865.APJD01000011_gene6537	2.132e-138	439.0	COG0069@1|root,COG0069@2|Bacteria,1MU7B@1224|Proteobacteria,2TREH@28211|Alphaproteobacteria,3JSMA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the glutamate synthase family	MA20_40290	-	-	-	-	-	-	-	-	-	-	-	Glu_synthase
SX1_k127_2033059_0	1297865.APJD01000011_gene6538	8.4e-323	992.0	COG0654@1|root,COG0654@2|Bacteria,1MUN4@1224|Proteobacteria,2TQT8@28211|Alphaproteobacteria,3JTRW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	FAD binding domain	pcpB	-	1.14.13.127,1.14.13.50	ko:K03391,ko:K05712	ko00360,ko00361,ko00364,ko01100,ko01120,ko01220,map00360,map00361,map00364,map01100,map01120,map01220	M00545	R03982,R06786,R06787,R07779	RC00236,RC01932	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_3
SX1_k127_2033059_2	1297865.APJD01000011_gene6539	1.354e-73	248.0	COG0053@1|root,COG0053@2|Bacteria,1MUDS@1224|Proteobacteria,2TT78@28211|Alphaproteobacteria,3JQTV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family	-	-	-	-	-	-	-	-	-	-	-	-	Cation_efflux,ZT_dimer
SX1_k127_2034066_2	1297865.APJD01000010_gene5102	1.354e-118	386.0	COG2207@1|root,COG2207@2|Bacteria,1Q1II@1224|Proteobacteria,2TUE0@28211|Alphaproteobacteria,3JS0J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding_2,HTH_18
SX1_k127_2034066_3	1297865.APJD01000010_gene5103	1.577e-117	379.0	COG0262@1|root,COG0262@2|Bacteria,1Q00Z@1224|Proteobacteria,2TTFQ@28211|Alphaproteobacteria,3JTT8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis	-	-	-	-	-	-	-	-	-	-	-	-	DHFR_1
SX1_k127_2034066_0	172088.AUGA01000025_gene473	3.909e-192	603.0	COG0726@1|root,COG0726@2|Bacteria,1PJQG@1224|Proteobacteria,2TUBN@28211|Alphaproteobacteria,3JRBS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
SX1_k127_2034066_1	1297865.APJD01000010_gene5105	8.01e-134	429.0	COG0386@1|root,COG0386@2|Bacteria,1RD1R@1224|Proteobacteria,2TU17@28211|Alphaproteobacteria,3JV9G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Belongs to the glutathione peroxidase family	bsaA	-	1.11.1.9	ko:K00432	ko00480,ko00590,ko04918,map00480,map00590,map04918	-	R00274,R07034,R07035	RC00011,RC00982	ko00000,ko00001,ko01000	-	-	-	GSHPx
SX1_k127_2034066_4	1297865.APJD01000010_gene5106	3.283e-20	89.0	COG1376@1|root,COG1376@2|Bacteria,1Q823@1224|Proteobacteria,2TV64@28211|Alphaproteobacteria,3JR6Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	ErfK YbiS YcfS YnhG family protein	-	-	-	-	-	-	-	-	-	-	-	-	PG_binding_1,YkuD
SX1_k127_2037127_0	1297865.APJD01000002_gene4075	0.0	1455.0	COG0086@1|root,COG0086@2|Bacteria,1MU3M@1224|Proteobacteria,2TRHV@28211|Alphaproteobacteria,3JQRW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	rpoC	GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234	2.7.7.6	ko:K03046,ko:K13797	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400	-	-	-	RNA_pol_Rpb1_1,RNA_pol_Rpb1_2,RNA_pol_Rpb1_3,RNA_pol_Rpb1_4,RNA_pol_Rpb1_5
SX1_k127_2037127_1	1297865.APJD01000002_gene4076	0.0	1408.0	COG1232@1|root,COG1232@2|Bacteria,1PJXN@1224|Proteobacteria,2TS3Q@28211|Alphaproteobacteria,3JQUH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Flavin containing amine oxidoreductase	MA20_35240	-	-	-	-	-	-	-	-	-	-	-	Amino_oxidase,Methyltransf_11
SX1_k127_2037127_2	1297865.APJD01000002_gene4077	1.75e-100	330.0	COG1132@1|root,COG1132@2|Bacteria,1MUBM@1224|Proteobacteria,2TQMR@28211|Alphaproteobacteria,3JSJZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	ABC transporter transmembrane region	MA20_35245	-	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
SX1_k127_2043315_7	1297865.APJD01000005_gene3919	1.968e-139	444.0	COG1429@1|root,COG1429@2|Bacteria,1MU5W@1224|Proteobacteria,2TQVD@28211|Alphaproteobacteria,3JUQP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	CobN/Magnesium Chelatase	cobN	-	6.6.1.2	ko:K02230	ko00860,ko01100,map00860,map01100	-	R05227	RC02000	ko00000,ko00001,ko01000	-	-	-	CobN-Mg_chel
SX1_k127_2043315_2	1297865.APJD01000005_gene3918	9.481e-217	673.0	COG0523@1|root,COG0523@2|Bacteria,1MVZV@1224|Proteobacteria,2TQWN@28211|Alphaproteobacteria,3JRFY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	cobalamin synthesis protein	cobW	-	-	ko:K02234	-	-	-	-	ko00000,ko00001	-	-	-	CobW_C,cobW
SX1_k127_2043315_10	189753.AXAS01000002_gene5278	3.763e-68	236.0	COG5469@1|root,COG5469@2|Bacteria,1N7P8@1224|Proteobacteria,2UGPN@28211|Alphaproteobacteria,3JYZS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1636)	MA20_14540	-	-	-	-	-	-	-	-	-	-	-	DUF1636
SX1_k127_2043315_8	1297865.APJD01000005_gene3916	4.379e-136	434.0	COG2109@1|root,COG2109@2|Bacteria,1MUN6@1224|Proteobacteria,2TT92@28211|Alphaproteobacteria,3JS5K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids	cobO	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	2.5.1.17	ko:K19221	ko00860,ko01100,map00860,map01100	M00122	R01492,R05220,R07268	RC00533	ko00000,ko00001,ko00002,ko01000	-	-	-	Co_AT_N,CobA_CobO_BtuR
SX1_k127_2043315_0	1297865.APJD01000005_gene3915	2.394e-310	956.0	COG1492@1|root,COG1492@2|Bacteria,1MUFY@1224|Proteobacteria,2TRHI@28211|Alphaproteobacteria,3JSKC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation	cobQ	-	6.3.5.10	ko:K02232	ko00860,ko01100,map00860,map01100	M00122	R05225	RC00010,RC01302	ko00000,ko00001,ko00002,ko01000	-	-	-	AAA_26,CbiA,GATase_3
SX1_k127_2043315_3	1297865.APJD01000005_gene3914	1.823e-203	645.0	COG0079@1|root,COG0079@2|Bacteria,1MXDP@1224|Proteobacteria,2TUEC@28211|Alphaproteobacteria,3JUP5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Aminotransferase class I and II	cobC	-	-	ko:K02225	ko00860,ko01100,map00860,map01100	M00122	R06529,R07302	RC00090,RC00096	ko00000,ko00001,ko00002	-	-	-	Aminotran_1_2
SX1_k127_2043315_4	1297865.APJD01000005_gene3913	3.649e-194	609.0	COG1270@1|root,COG1270@2|Bacteria,1MURM@1224|Proteobacteria,2TRZ8@28211|Alphaproteobacteria,3JSUR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group	cobD	-	6.3.1.10	ko:K02227	ko00860,ko01100,map00860,map01100	M00122	R06529,R07302	RC00090,RC00096	ko00000,ko00001,ko00002,ko01000	-	-	-	CobD_Cbib
SX1_k127_2043315_9	1297865.APJD01000005_gene3912	3.03e-101	332.0	COG2087@1|root,COG2087@2|Bacteria,1RH0A@1224|Proteobacteria,2U98X@28211|Alphaproteobacteria,3JQW7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate	cobP	-	2.7.1.156,2.7.7.62	ko:K02231	ko00860,ko01100,map00860,map01100	M00122	R05221,R05222,R06558	RC00002,RC00428	ko00000,ko00001,ko00002,ko01000	-	-	-	CobU
SX1_k127_2043315_6	1297865.APJD01000005_gene3911	1.063e-144	463.0	COG0778@1|root,COG0778@2|Bacteria,1MZN8@1224|Proteobacteria,2TTDR@28211|Alphaproteobacteria,3JTER@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Nitroreductase family	bluB	GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016491,GO:0016705,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	1.13.11.79	ko:K04719	ko00740,ko01100,map00740,map01100	-	R09083	RC00435,RC02413	ko00000,ko00001,ko01000	-	-	-	Nitroreductase
SX1_k127_2043315_11	443598.AUFA01000003_gene2217	7.448e-33	135.0	2C55K@1|root,2ZJIM@2|Bacteria,1NF7Q@1224|Proteobacteria,2UF7U@28211|Alphaproteobacteria,3K192@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2043315_12	1297865.APJD01000005_gene3910	6.002e-32	130.0	2EKSU@1|root,33EGJ@2|Bacteria,1PN53@1224|Proteobacteria,2V0RJ@28211|Alphaproteobacteria,3K12R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Probable cobalt transporter subunit (CbtB)	-	-	-	-	-	-	-	-	-	-	-	-	CbtB
SX1_k127_2043315_5	1297865.APJD01000005_gene3909	1.492e-149	476.0	COG5446@1|root,COG5446@2|Bacteria,1RBWQ@1224|Proteobacteria,2U9NN@28211|Alphaproteobacteria,3JTIZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Probable cobalt transporter subunit (CbtA)	cbtA	-	-	-	-	-	-	-	-	-	-	-	CbtA
SX1_k127_2043315_1	1297865.APJD01000005_gene3908	7.329e-217	674.0	COG1609@1|root,COG1609@2|Bacteria,1MVUR@1224|Proteobacteria,2U0YB@28211|Alphaproteobacteria,3JRNB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn _helix lactose operon repressor	-	-	-	ko:K02529	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_3
SX1_k127_2045877_4	1297865.APJD01000047_gene4815	2.43e-146	464.0	COG0281@1|root,COG0281@2|Bacteria,1MU0A@1224|Proteobacteria,2TQJT@28211|Alphaproteobacteria,3JT6H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Malic enzyme, NAD binding domain	-	-	1.1.1.38	ko:K00027	ko00620,ko01200,ko02020,map00620,map01200,map02020	-	R00214	RC00105	ko00000,ko00001,ko01000	-	-	-	Malic_M,malic
SX1_k127_2045877_1	1297865.APJD01000047_gene4814	3.943e-269	833.0	COG0477@1|root,COG0477@2|Bacteria,1MU46@1224|Proteobacteria,2TQVP@28211|Alphaproteobacteria,3JRCZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
SX1_k127_2045877_6	196490.AUEZ01000015_gene4537	8.163e-63	218.0	2DYCJ@1|root,3495B@2|Bacteria,1N047@1224|Proteobacteria,2U8RT@28211|Alphaproteobacteria,3K0GG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SPW repeat	-	-	-	-	-	-	-	-	-	-	-	-	SPW
SX1_k127_2045877_8	1297865.APJD01000047_gene4812	1.173e-31	129.0	29FD5@1|root,302AU@2|Bacteria,1NCF8@1224|Proteobacteria,2UHXE@28211|Alphaproteobacteria,3K1CD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2045877_3	1297865.APJD01000047_gene4811	4.359e-155	492.0	COG0179@1|root,COG0179@2|Bacteria,1MVFA@1224|Proteobacteria,2TRTM@28211|Alphaproteobacteria,3JR2I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Fumarylacetoacetate (FAA) hydrolase family	MA20_07900	-	3.7.1.20	ko:K16165	ko00350,ko01100,ko01120,map00350,map01100,map01120	-	R01085	RC00326,RC00446	ko00000,ko00001,ko01000	-	-	-	FAA_hydrolase
SX1_k127_2045877_5	1297865.APJD01000047_gene4810	3.421e-93	319.0	2BUNJ@1|root,32PZE@2|Bacteria,1NFZZ@1224|Proteobacteria,2TV1U@28211|Alphaproteobacteria,3JXIY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2045877_0	1297865.APJD01000047_gene4809	0.0	1165.0	COG1132@1|root,COG1132@2|Bacteria,1MUBM@1224|Proteobacteria,2TQMR@28211|Alphaproteobacteria,3JRJ4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	ABC transporter	MA20_07905	-	-	ko:K06147,ko:K11085	ko02010,map02010	-	-	-	ko00000,ko00001,ko01000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
SX1_k127_2045877_2	1297865.APJD01000047_gene4808	4.627e-219	679.0	COG1087@1|root,COG1087@2|Bacteria,1MUHI@1224|Proteobacteria,2TTC7@28211|Alphaproteobacteria,3JVFI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the NAD(P)-dependent epimerase dehydratase family	galE	-	5.1.3.2	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00361,M00362,M00632	R00291,R02984	RC00289	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase
SX1_k127_2045877_7	1297865.APJD01000047_gene4807	4.073e-45	164.0	COG0438@1|root,COG0438@2|Bacteria,1MU9C@1224|Proteobacteria,2TQJM@28211|Alphaproteobacteria,3JVRT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Glycosyl transferases group 1	lpcC	-	-	ko:K12989	-	-	-	-	ko00000,ko01000,ko01003,ko01005	-	GT4	-	Glycos_transf_1
SX1_k127_2049687_2	1297865.APJD01000004_gene5383	2.865e-91	300.0	COG0667@1|root,COG0667@2|Bacteria,1MVEH@1224|Proteobacteria,2TRHS@28211|Alphaproteobacteria,3JVP4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldo keto reductase	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
SX1_k127_2049687_0	1297865.APJD01000004_gene5382	3.965e-203	636.0	COG1360@1|root,COG1360@2|Bacteria,1MU4S@1224|Proteobacteria,2TQKZ@28211|Alphaproteobacteria,3JQX8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	OmpA family	MA20_18060	-	-	ko:K02557	ko02030,ko02040,map02030,map02040	-	-	-	ko00000,ko00001,ko02000,ko02035	1.A.30.1	-	-	OmpA
SX1_k127_2049687_1	1297865.APJD01000004_gene5381	2.511e-197	616.0	COG1511@1|root,COG1511@2|Bacteria,1NYJB@1224|Proteobacteria,2TSX0@28211|Alphaproteobacteria,3JQXZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	MotA TolQ ExbB proton channel family	MA20_18055	-	-	-	-	-	-	-	-	-	-	-	MotA_ExbB
SX1_k127_2054334_2	1297865.APJD01000015_gene3475	5.535e-173	543.0	COG0583@1|root,COG0583@2|Bacteria,1PJWF@1224|Proteobacteria,2U1KJ@28211|Alphaproteobacteria,3JWKX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_2054334_0	1297865.APJD01000015_gene3476	8.105e-298	915.0	COG1249@1|root,COG1249@2|Bacteria,1QW6X@1224|Proteobacteria,2TWQI@28211|Alphaproteobacteria,3JR1X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	FAD dependent oxidoreductase	MA20_40205	-	-	-	-	-	-	-	-	-	-	-	FAD_oxidored
SX1_k127_2054334_1	1297865.APJD01000015_gene3477	9.695e-213	664.0	COG0715@1|root,COG0715@2|Bacteria,1NF3S@1224|Proteobacteria,2TREQ@28211|Alphaproteobacteria,3JVU0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NMT1-like family	MA20_40210	-	-	ko:K02051	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	NMT1
SX1_k127_2054334_3	1297865.APJD01000015_gene3478	7.4e-141	448.0	COG1116@1|root,COG1116@2|Bacteria,1MY5D@1224|Proteobacteria,2TQKX@28211|Alphaproteobacteria,3JTS1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ATPases associated with a variety of cellular activities	MA20_40215	-	-	ko:K02049	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	ABC_tran
SX1_k127_2056055_2	1297865.APJD01000005_gene3893	5.016e-273	841.0	COG0021@1|root,COG0021@2|Bacteria,1MUEY@1224|Proteobacteria,2TQUX@28211|Alphaproteobacteria,3JSRY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate	cbbT	-	2.2.1.1	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01067,R01641,R01830,R06590	RC00032,RC00226,RC00571,RC01560	ko00000,ko00001,ko00002,ko01000	-	-	-	Transket_pyr,Transketolase_C,Transketolase_N
SX1_k127_2056055_5	1297865.APJD01000005_gene3894	8.477e-235	726.0	COG0191@1|root,COG0191@2|Bacteria,1MURX@1224|Proteobacteria,2TSAD@28211|Alphaproteobacteria,3JS5T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Function of homologous gene experimentally demonstrated in an other organism	cbbA	-	4.1.2.13	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00003,M00165,M00167,M00344,M00345	R01068,R01070,R01829,R02568	RC00438,RC00439,RC00603,RC00604	ko00000,ko00001,ko00002,ko01000	-	-	-	F_bP_aldolase
SX1_k127_2056055_1	1297865.APJD01000005_gene3895	0.0	1015.0	COG1850@1|root,COG1850@2|Bacteria,1MWEB@1224|Proteobacteria,2TSJV@28211|Alphaproteobacteria,3JU4U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site	cbbL	-	4.1.1.39	ko:K01601	ko00630,ko00710,ko01100,ko01120,ko01200,map00630,map00710,map01100,map01120,map01200	M00165,M00166,M00532	R00024,R03140	RC00172,RC00859	ko00000,ko00001,ko00002,ko01000	-	-	-	RuBisCO_large,RuBisCO_large_N
SX1_k127_2056055_12	1297865.APJD01000005_gene3896	1.514e-93	306.0	COG4451@1|root,COG4451@2|Bacteria,1R9ZE@1224|Proteobacteria,2U7JJ@28211|Alphaproteobacteria,3JY43@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	ribulose bisphosphate carboxylase, small chain	cbbS	-	4.1.1.39	ko:K01602	ko00630,ko00710,ko01100,ko01120,ko01200,map00630,map00710,map01100,map01120,map01200	M00165,M00166,M00532	R00024,R03140	RC00172,RC00859	ko00000,ko00001,ko00002,ko01000	-	-	-	RuBisCO_small
SX1_k127_2056055_7	1297865.APJD01000005_gene3897	1.476e-198	623.0	COG0464@1|root,COG0464@2|Bacteria,1MUCN@1224|Proteobacteria,2TVFY@28211|Alphaproteobacteria,3JQTS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	ATPase family associated with various cellular activities (AAA)	cbbX	-	-	-	-	-	-	-	-	-	-	-	AAA
SX1_k127_2056055_11	1297865.APJD01000005_gene3898	1.19e-140	462.0	COG0637@1|root,COG0637@2|Bacteria,1PUMZ@1224|Proteobacteria,2U1D1@28211|Alphaproteobacteria,3JRGI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	haloacid dehalogenase-like hydrolase	cbbY	-	-	-	-	-	-	-	-	-	-	-	HAD_2
SX1_k127_2056055_6	1297865.APJD01000005_gene3899	2.108e-228	708.0	COG4213@1|root,COG4213@2|Bacteria,1MX63@1224|Proteobacteria,2TQQW@28211|Alphaproteobacteria,3JU57@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Periplasmic binding protein domain	chvE	GO:0005575,GO:0005623,GO:0042597,GO:0044464	-	ko:K02058,ko:K10546	ko02010,map02010	M00216,M00221	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2,3.A.1.2.5	-	-	Peripla_BP_4
SX1_k127_2056055_0	1297865.APJD01000005_gene3900	0.0	1029.0	COG1129@1|root,COG1129@2|Bacteria,1MU22@1224|Proteobacteria,2TQJV@28211|Alphaproteobacteria,3JQYV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	ABC transporter	gguA	-	3.6.3.17	ko:K10548	ko02010,map02010	M00216	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.2.5	-	-	ABC_tran
SX1_k127_2056055_4	1297865.APJD01000005_gene3901	9.969e-243	752.0	COG4214@1|root,COG4214@2|Bacteria,1MXXS@1224|Proteobacteria,2TR9B@28211|Alphaproteobacteria,3JTFZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Branched-chain amino acid transport system / permease component	gguB	GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0016020,GO:0016021,GO:0019321,GO:0031224,GO:0042732,GO:0044238,GO:0044281,GO:0044425,GO:0044464,GO:0071704,GO:0071944	-	ko:K10547	ko02010,map02010	M00216	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2.5	-	-	BPD_transp_2
SX1_k127_2056055_9	1297865.APJD01000005_gene3902	4.819e-181	567.0	COG0483@1|root,COG0483@2|Bacteria,1NFR1@1224|Proteobacteria,2U1X2@28211|Alphaproteobacteria,3JSHH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Inositol monophosphatase family	-	-	3.1.3.25	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	M00131	R01185,R01186,R01187	RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	Inositol_P
SX1_k127_2056055_3	1297865.APJD01000005_gene3903	6.669e-259	807.0	2CIPC@1|root,2Z9HB@2|Bacteria,1R3W8@1224|Proteobacteria,2TST7@28211|Alphaproteobacteria,3JTHB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Glycosyltransferase family 87	-	-	-	-	-	-	-	-	-	-	-	-	GT87
SX1_k127_2056055_10	1297865.APJD01000005_gene3904	1.795e-149	474.0	COG4221@1|root,COG4221@2|Bacteria,1PWXN@1224|Proteobacteria,2U2SU@28211|Alphaproteobacteria,3JTFM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF4336)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4336
SX1_k127_2056055_8	1297865.APJD01000005_gene3905	7.043e-189	589.0	COG0683@1|root,COG0683@2|Bacteria,1MV1Z@1224|Proteobacteria,2UQ30@28211|Alphaproteobacteria,3K3MT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_2059574_4	1297865.APJD01000005_gene3547	1.22e-120	387.0	COG3243@1|root,COG3243@2|Bacteria,1MU68@1224|Proteobacteria,2VFW2@28211|Alphaproteobacteria,3JTF9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus	MA20_16675	-	-	ko:K03821	ko00650,map00650	-	R04254	RC00004	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1,PhaC_N
SX1_k127_2059574_3	1297865.APJD01000005_gene3548	1.732e-122	396.0	COG1247@1|root,COG1247@2|Bacteria,1R6UW@1224|Proteobacteria,2U09H@28211|Alphaproteobacteria,3JQVX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Acetyltransferase (GNAT) domain	MA20_16670	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
SX1_k127_2059574_6	1297865.APJD01000005_gene3549	1.949e-86	287.0	COG5490@1|root,COG5490@2|Bacteria,1MUUM@1224|Proteobacteria,2U1GB@28211|Alphaproteobacteria,3JQTT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Phasin protein	MA20_16665	-	-	-	-	-	-	-	-	-	-	-	Phasin_2
SX1_k127_2059574_0	1297865.APJD01000005_gene3550	3.884e-268	827.0	COG2733@1|root,COG2733@2|Bacteria,1MX3G@1224|Proteobacteria,2U15J@28211|Alphaproteobacteria,3JSYM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF445)	MA20_16660	-	-	-	-	-	-	-	-	-	-	-	DUF445
SX1_k127_2059574_2	1297865.APJD01000005_gene3551	1.358e-169	532.0	COG1075@1|root,COG1075@2|Bacteria,1NJNA@1224|Proteobacteria,2TSQC@28211|Alphaproteobacteria,3JV19@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Alpha beta hydrolase	MA20_16655	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6,DUF676,Hydrolase_4
SX1_k127_2059574_1	1297865.APJD01000005_gene3552	4.48e-193	602.0	COG3327@1|root,COG3327@2|Bacteria,1R4IF@1224|Proteobacteria,2TS3A@28211|Alphaproteobacteria,3JU2C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	phenylacetic acid degradation operon negative regulatory protein PaaX	paaX	-	-	ko:K02616	-	-	-	-	ko00000,ko03000	-	-	-	PaaX,PaaX_C
SX1_k127_2059574_5	1297865.APJD01000005_gene3553	2.524e-92	303.0	COG3396@1|root,COG3396@2|Bacteria,1MVQ7@1224|Proteobacteria,2TTC4@28211|Alphaproteobacteria,3JTGS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Phenylacetic acid catabolic protein	paaA	-	1.14.13.149	ko:K02609	ko00360,ko01120,map00360,map01120	-	R09838	RC02690	ko00000,ko00001,ko01000	-	-	-	PaaA_PaaC
SX1_k127_2060363_5	1122614.JHZF01000011_gene680	0.0003986	51.0	COG1294@1|root,COG1294@2|Bacteria,1MURP@1224|Proteobacteria,2TU3I@28211|Alphaproteobacteria,2PCWE@252301|Oceanicola	28211|Alphaproteobacteria	C	Cytochrome bd terminal oxidase subunit II	cydB	-	1.10.3.14	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cyt_bd_oxida_II
SX1_k127_2060363_4	1297865.APJD01000003_gene6173	1.046e-103	347.0	COG1294@1|root,COG1294@2|Bacteria,1MURP@1224|Proteobacteria,2TU3I@28211|Alphaproteobacteria,3JT59@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	oxidase, subunit II	cydB	-	1.10.3.14	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cyt_bd_oxida_II
SX1_k127_2060363_0	1297865.APJD01000003_gene6174	7.023e-308	944.0	COG1271@1|root,COG1271@2|Bacteria,1MV60@1224|Proteobacteria,2TQMA@28211|Alphaproteobacteria,3JREF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome bd terminal oxidase subunit I	cydA	-	1.10.3.14	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cyt_bd_oxida_I
SX1_k127_2060363_2	1230476.C207_06291	1.063e-121	391.0	COG0526@1|root,COG0526@2|Bacteria,1QTY9@1224|Proteobacteria,2TW6Y@28211|Alphaproteobacteria,3JRHB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CO	Thioredoxin-like	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,NHL,Redoxin,Thioredoxin_8
SX1_k127_2060363_1	1297865.APJD01000003_gene6176	4.551e-135	434.0	COG0785@1|root,COG0785@2|Bacteria,1MVV0@1224|Proteobacteria,2TUNG@28211|Alphaproteobacteria,3JTPY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Cytochrome C biogenesis protein transmembrane region	MA20_22750	-	-	-	-	-	-	-	-	-	-	-	DsbD
SX1_k127_2060363_3	1297865.APJD01000003_gene6177	2.415e-116	375.0	COG1595@1|root,COG1595@2|Bacteria,1MVPD@1224|Proteobacteria,2TVKC@28211|Alphaproteobacteria,3JTG2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Belongs to the sigma-70 factor family. ECF subfamily	MA20_22745	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4,Sigma70_r4_2
SX1_k127_2069196_2	1297865.APJD01000005_gene3675	4.456e-123	394.0	COG3158@1|root,COG3158@2|Bacteria,1MUVH@1224|Proteobacteria,2TRVJ@28211|Alphaproteobacteria,3JTDY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Transport of potassium into the cell	-	-	-	ko:K03549	-	-	-	-	ko00000,ko02000	2.A.72	-	-	K_trans
SX1_k127_2069196_1	1297865.APJD01000005_gene3674	3.573e-208	648.0	COG0583@1|root,COG0583@2|Bacteria,1MWY0@1224|Proteobacteria,2U6NJ@28211|Alphaproteobacteria,3JYME@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_2069196_0	1297865.APJD01000005_gene3673	1.992e-268	828.0	COG1524@1|root,COG1524@2|Bacteria,1N5SF@1224|Proteobacteria,2TU7V@28211|Alphaproteobacteria,3JXCK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Type I phosphodiesterase / nucleotide pyrophosphatase	phnA	-	3.11.1.2	ko:K19670	ko00440,map00440	-	R00318	RC01309	ko00000,ko00001,ko01000	-	-	-	Phosphodiest
SX1_k127_2072241_2	1297865.APJD01000020_gene139	5.483e-79	267.0	COG0583@1|root,COG0583@2|Bacteria,1PQWH@1224|Proteobacteria,2TU1R@28211|Alphaproteobacteria,3JT3U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_2072241_1	1297865.APJD01000020_gene140	5.23e-144	459.0	2DBTP@1|root,2ZAZW@2|Bacteria,1QYZ8@1224|Proteobacteria,2TY2H@28211|Alphaproteobacteria,3K6W2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	L-2-amino-thiazoline-4-carboxylic acid hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	ATC_hydrolase
SX1_k127_2072241_0	1297865.APJD01000020_gene141	2.42e-169	533.0	COG0477@1|root,COG2814@2|Bacteria,1MUBP@1224|Proteobacteria,2TQVH@28211|Alphaproteobacteria,3JXRU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	MFS_1 like family	mdtG	-	-	ko:K08161	-	-	-	-	ko00000,ko02000	2.A.1.2.20	-	-	MFS_1,Sugar_tr
SX1_k127_2078675_1	1297865.APJD01000003_gene6409	2.5e-323	990.0	COG0492@1|root,COG2905@1|root,COG0492@2|Bacteria,COG2905@2|Bacteria,1MVX2@1224|Proteobacteria,2TQN3@28211|Alphaproteobacteria,3JU7C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cyclic nucleotide-monophosphate binding domain	MA20_21135	-	1.8.1.9	ko:K00384	ko00450,map00450	-	R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2,Pyr_redox_3,cNMP_binding
SX1_k127_2078675_5	1230476.C207_02714	2.839e-17	82.0	2AG2X@1|root,3167C@2|Bacteria,1NGKJ@1224|Proteobacteria,2UJRM@28211|Alphaproteobacteria,3K1ZP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2078675_3	1297865.APJD01000003_gene6407	3.43e-64	220.0	2A7SP@1|root,30WRP@2|Bacteria,1REPY@1224|Proteobacteria,2U7IP@28211|Alphaproteobacteria,3JYUV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2078675_2	1297865.APJD01000003_gene6406	1.313e-168	530.0	COG3637@1|root,COG3637@2|Bacteria,1R4WV@1224|Proteobacteria,2U0V2@28211|Alphaproteobacteria,3JR5B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	OmpA-like transmembrane domain	MA20_19585	-	-	ko:K16079	-	-	-	-	ko00000,ko02000	1.B.4.2.1	-	-	OMP_b-brl
SX1_k127_2078675_0	1297865.APJD01000003_gene6405	0.0	1258.0	COG0840@1|root,COG4192@1|root,COG0840@2|Bacteria,COG4192@2|Bacteria,1MU9B@1224|Proteobacteria,2TQR7@28211|Alphaproteobacteria,3JSEI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NT	chemotaxis	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	HAMP,MCPsignal
SX1_k127_2082640_0	1297865.APJD01000014_gene898	3.427e-181	567.0	COG0583@1|root,COG0583@2|Bacteria,1NSX7@1224|Proteobacteria,2U12F@28211|Alphaproteobacteria,3JQRC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_2082640_3	1297865.APJD01000014_gene899	1.069e-117	382.0	COG1335@1|root,COG1335@2|Bacteria,1RDHA@1224|Proteobacteria,2U71S@28211|Alphaproteobacteria,3JUB2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Isochorismatase family	-	-	-	-	-	-	-	-	-	-	-	-	Isochorismatase
SX1_k127_2082640_2	1297865.APJD01000014_gene900	3.439e-128	424.0	COG0625@1|root,COG0625@2|Bacteria,1Q9UI@1224|Proteobacteria,2TTAF@28211|Alphaproteobacteria,3JV96@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, C-terminal domain	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_N_2,GST_N_3
SX1_k127_2082640_1	1297865.APJD01000014_gene901	5.873e-145	459.0	COG0775@1|root,COG0775@2|Bacteria,1MUMQ@1224|Proteobacteria,2TSX1@28211|Alphaproteobacteria,3JTM2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations	amn	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008714,GO:0016787,GO:0016798,GO:0016799,GO:0044424,GO:0044444,GO:0044464	3.2.2.4	ko:K01241	ko00230,map00230	-	R00182	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	AMNp_N,PNP_UDP_1
SX1_k127_2092119_0	1230476.C207_00475	2.335e-193	605.0	COG0477@1|root,COG2814@2|Bacteria,1MW19@1224|Proteobacteria,2TRJ1@28211|Alphaproteobacteria,3JRV5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	drug resistance transporter, Bcr CflA	MA20_32310	-	-	ko:K07552	-	-	-	-	ko00000,ko02000	2.A.1.2	-	-	MFS_1
SX1_k127_2092119_2	1297865.APJD01000007_gene2068	3.663e-163	518.0	COG0477@1|root,COG0477@2|Bacteria,1MU46@1224|Proteobacteria,2TQVP@28211|Alphaproteobacteria,3JRCZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
SX1_k127_2092119_3	1297865.APJD01000007_gene2068	6.052e-106	344.0	COG0477@1|root,COG0477@2|Bacteria,1MU46@1224|Proteobacteria,2TQVP@28211|Alphaproteobacteria,3JRCZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
SX1_k127_2092119_1	1297865.APJD01000007_gene2069	3.857e-189	592.0	2DC2D@1|root,2ZCMG@2|Bacteria,1R8RP@1224|Proteobacteria,2U2PD@28211|Alphaproteobacteria,3JX6K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3829)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3829
SX1_k127_2095885_0	1297865.APJD01000023_gene1124	6.135e-254	788.0	COG4774@1|root,COG4774@2|Bacteria,1MVZD@1224|Proteobacteria,2TS4K@28211|Alphaproteobacteria,3JR1J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	siderophore receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,STN,TonB_dep_Rec
SX1_k127_2095885_1	1297865.APJD01000023_gene1125	5.156e-162	510.0	COG0583@1|root,COG0583@2|Bacteria,1MWY0@1224|Proteobacteria,2TSD9@28211|Alphaproteobacteria,3JVBA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	ampR	GO:0002791,GO:0002793,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010604,GO:0019219,GO:0019222,GO:0030162,GO:0031323,GO:0031325,GO:0031326,GO:0032268,GO:0032270,GO:0032879,GO:0032880,GO:0032991,GO:0032993,GO:0043455,GO:0043565,GO:0043900,GO:0043901,GO:0044424,GO:0044464,GO:0045862,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050708,GO:0050714,GO:0050789,GO:0050794,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051173,GO:0051222,GO:0051223,GO:0051246,GO:0051247,GO:0051252,GO:0060255,GO:0065007,GO:0070201,GO:0080090,GO:0090087,GO:0097159,GO:0140110,GO:1900190,GO:1900191,GO:1900231,GO:1900232,GO:1900376,GO:1900378,GO:1901363,GO:1903506,GO:1903530,GO:1903532,GO:1904951,GO:2000112,GO:2001141	-	ko:K17850	ko01501,map01501	M00628	-	-	ko00000,ko00001,ko00002,ko03000	-	-	-	HTH_1,LysR_substrate
SX1_k127_2096353_2	1297865.APJD01000047_gene4797	1.778e-296	912.0	COG0662@1|root,COG0836@1|root,COG0662@2|Bacteria,COG0836@2|Bacteria,1MV39@1224|Proteobacteria,2TT0R@28211|Alphaproteobacteria,3JS2Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	GM	Belongs to the mannose-6-phosphate isomerase type 2 family	manC	-	2.7.7.13,5.3.1.8	ko:K00971,ko:K16011	ko00051,ko00520,ko01100,ko01110,ko01130,ko02025,map00051,map00520,map01100,map01110,map01130,map02025	M00114,M00361,M00362	R00885,R01819	RC00002,RC00376	ko00000,ko00001,ko00002,ko01000	-	-	-	MannoseP_isomer,NTP_transferase
SX1_k127_2096353_4	1297865.APJD01000047_gene4796	3.166e-210	656.0	COG0673@1|root,COG0673@2|Bacteria,1MV7C@1224|Proteobacteria,2TQM1@28211|Alphaproteobacteria,3JSWB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Oxidoreductase family, NAD-binding Rossmann fold	MA20_07975	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
SX1_k127_2096353_3	1297865.APJD01000047_gene4795	4.139e-247	764.0	COG0399@1|root,COG0399@2|Bacteria,1MUPN@1224|Proteobacteria,2TRIQ@28211|Alphaproteobacteria,3JSYW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the DegT DnrJ EryC1 family	MA20_07980	-	-	-	-	-	-	-	-	-	-	-	DegT_DnrJ_EryC1
SX1_k127_2096353_1	1297865.APJD01000047_gene4794	7.473e-310	952.0	COG0728@1|root,COG0728@2|Bacteria,1MUH0@1224|Proteobacteria,2TS44@28211|Alphaproteobacteria,3JQRJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane	murJ	-	-	ko:K03980	-	-	-	-	ko00000,ko01011,ko02000	2.A.66.4	-	-	MVIN
SX1_k127_2096353_0	1297865.APJD01000047_gene4793	0.0	1274.0	COG1529@1|root,COG1529@2|Bacteria,1MUEA@1224|Proteobacteria,2TQMW@28211|Alphaproteobacteria,3JS8F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain	MA20_08005	-	1.2.5.3	ko:K03520	-	-	R11168	RC02800	ko00000,ko01000	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2
SX1_k127_2096587_1	1297865.APJD01000007_gene2333	6.843e-224	697.0	COG0473@1|root,COG0473@2|Bacteria,1MUH4@1224|Proteobacteria,2TSXM@28211|Alphaproteobacteria,3JUNR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CE	Isocitrate/isopropylmalate dehydrogenase	MA20_17220	GO:0006082,GO:0006575,GO:0006732,GO:0006793,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016053,GO:0019297,GO:0019298,GO:0019752,GO:0032787,GO:0042398,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576	1.1.1.85	ko:K00052	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	M00432,M00535	R00994,R04426,R10052	RC00084,RC00417,RC03036	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Iso_dh,MoCF_biosynth
SX1_k127_2096587_0	1297865.APJD01000007_gene2332	8.732e-225	701.0	COG1064@1|root,COG1064@2|Bacteria,1MUTT@1224|Proteobacteria,2TTMV@28211|Alphaproteobacteria,3JR4E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	alcohol dehydrogenase	MA20_17225	-	1.1.1.1	ko:K00001,ko:K13953	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	-	R00623,R00754,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310	RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_zinc_N
SX1_k127_2096587_2	1297865.APJD01000007_gene2331	5.803e-45	162.0	COG4608@1|root,COG4608@2|Bacteria,1NU4K@1224|Proteobacteria,2TQTV@28211|Alphaproteobacteria,3JWAY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Oligopeptide/dipeptide transporter, C-terminal region	MA20_17230	-	-	ko:K02032	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
SX1_k127_2120976_0	1297865.APJD01000005_gene4008	0.0	3492.0	COG3210@1|root,COG3210@2|Bacteria,1MXIP@1224|Proteobacteria,2TTVB@28211|Alphaproteobacteria,3JV1M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	TIGRFAM filamentous haemagglutinin family outer membrane protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF3739,Haemagg_act
SX1_k127_2120976_2	1297865.APJD01000005_gene4007	1.3e-104	342.0	2E9H8@1|root,333QC@2|Bacteria,1RGCB@1224|Proteobacteria,2U7G0@28211|Alphaproteobacteria,3JZ7E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	ko:K02463	ko05111,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	-
SX1_k127_2120976_1	1297865.APJD01000005_gene4006	2.347e-108	367.0	28JU5@1|root,2Z9J8@2|Bacteria,1NW3A@1224|Proteobacteria,2U1S6@28211|Alphaproteobacteria,3JVMH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2121578_1	1297865.APJD01000003_gene6169	3.279e-172	544.0	COG1960@1|root,COG1960@2|Bacteria,1MUBH@1224|Proteobacteria,2TVBB@28211|Alphaproteobacteria,3JRDX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	acyl-CoA dehydrogenase	MA20_22775	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_2121578_0	1297865.APJD01000003_gene6168	1.952e-264	815.0	COG1960@1|root,COG1960@2|Bacteria,1MVJC@1224|Proteobacteria,2TUVB@28211|Alphaproteobacteria,3JRBV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	acyl-CoA dehydrogenase	MA20_22780	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_2121578_2	1230476.C207_06283	4.067e-112	372.0	COG2128@1|root,COG2128@2|Bacteria,1NFKC@1224|Proteobacteria,2TQSD@28211|Alphaproteobacteria,3JVN8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	decarboxylase	MA20_22785	-	4.1.1.44	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	-	R03470	RC00938	ko00000,ko00001,ko01000	-	-	-	CMD
SX1_k127_2121578_3	1297865.APJD01000003_gene6166	7.362e-98	325.0	COG2514@1|root,COG2514@2|Bacteria,1RBC7@1224|Proteobacteria,2U5JP@28211|Alphaproteobacteria,3JR7C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	MA20_22790	-	1.13.11.2	ko:K07104	ko00361,ko00362,ko00622,ko00643,ko01100,ko01120,ko01220,map00361,map00362,map00622,map00643,map01100,map01120,map01220	M00569	R00816,R04089,R05295,R05404,R05406,R07795	RC00387,RC00643,RC01075,RC01364,RC01914	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyoxalase
SX1_k127_2124411_8	398525.KB900701_gene3381	3.295e-74	251.0	COG2855@1|root,COG2855@2|Bacteria,1MVIP@1224|Proteobacteria,2TVK9@28211|Alphaproteobacteria,3JV4K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Conserved hypothetical protein 698	MA20_14895	-	-	-	-	-	-	-	-	-	-	-	Cons_hypoth698
SX1_k127_2124411_6	1297865.APJD01000007_gene2234	8.925e-199	620.0	COG0583@1|root,COG0583@2|Bacteria,1MWVU@1224|Proteobacteria,2TQS4@28211|Alphaproteobacteria,3JU3N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Transcriptional regulator, LysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_2124411_1	1297865.APJD01000007_gene2232	8.504e-271	834.0	COG0624@1|root,COG0624@2|Bacteria,1MVUX@1224|Proteobacteria,2TR5X@28211|Alphaproteobacteria,3JRW7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Peptidase family M28	MA20_34775	-	3.5.3.9	ko:K02083	ko00230,ko01120,map00230,map01120	-	R02423	RC00064	ko00000,ko00001,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20,Peptidase_M28
SX1_k127_2124411_2	1230476.C207_03664	2.507e-237	737.0	COG1744@1|root,COG1744@2|Bacteria,1MWTM@1224|Proteobacteria,2TSZU@28211|Alphaproteobacteria,3JV4E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	ABC transporter substrate-binding protein PnrA-like	-	-	-	ko:K02058	-	M00221	-	-	ko00000,ko00002,ko02000	3.A.1.2	-	-	Bmp
SX1_k127_2124411_3	1297865.APJD01000007_gene2230	4.749e-221	709.0	COG4603@1|root,COG4603@2|Bacteria,1MX6V@1224|Proteobacteria,2TUGD@28211|Alphaproteobacteria,3JTD2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Branched-chain amino acid transport system / permease component	-	-	-	ko:K02057	-	M00221	-	-	ko00000,ko00002,ko02000	3.A.1.2	-	-	BPD_transp_2
SX1_k127_2124411_5	1297865.APJD01000007_gene2229	1.006e-199	622.0	COG1079@1|root,COG1079@2|Bacteria,1MVDQ@1224|Proteobacteria,2TSGJ@28211|Alphaproteobacteria,3JRUB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Branched-chain amino acid transport system / permease component	-	-	-	ko:K02057	-	M00221	-	-	ko00000,ko00002,ko02000	3.A.1.2	-	-	BPD_transp_2
SX1_k127_2124411_7	1297865.APJD01000007_gene2228	2.518e-153	484.0	COG1335@1|root,COG1335@2|Bacteria,1MV0W@1224|Proteobacteria,2TSQZ@28211|Alphaproteobacteria,3JU15@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Isochorismatase family	-	-	-	-	-	-	-	-	-	-	-	-	Isochorismatase
SX1_k127_2124411_0	1297865.APJD01000007_gene2227	0.0	1004.0	COG3845@1|root,COG3845@2|Bacteria,1NT0H@1224|Proteobacteria,2UPJ8@28211|Alphaproteobacteria,3JTM8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	3.6.3.17	ko:K02056	-	M00221	-	-	ko00000,ko00002,ko01000,ko02000	3.A.1.2	-	-	ABC_tran
SX1_k127_2124411_4	1297865.APJD01000007_gene2226	6.453e-206	639.0	COG0726@1|root,COG0726@2|Bacteria,1MV3V@1224|Proteobacteria,2TR0I@28211|Alphaproteobacteria,3JQQA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Polysaccharide deacetylase	MA20_34855	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
SX1_k127_2129045_1	1297865.APJD01000001_gene5990	4.794e-297	912.0	COG0439@1|root,COG0439@2|Bacteria,1MU4H@1224|Proteobacteria,2U25Z@28211|Alphaproteobacteria,3JTBZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Biotin carboxylase	accC	GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576	6.3.4.14,6.4.1.2	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742,R04385	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,CPSase_L_D2
SX1_k127_2129045_0	1297865.APJD01000001_gene5991	1.897e-304	941.0	COG4251@1|root,COG5278@1|root,COG4251@2|Bacteria,COG5278@2|Bacteria,1NSQ1@1224|Proteobacteria,2TSPY@28211|Alphaproteobacteria,3JU59@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	CHASE3,HATPase_c,HisKA,MHYT,PAS_3
SX1_k127_2129045_3	1297865.APJD01000001_gene5992	2.833e-90	298.0	COG0784@1|root,COG0784@2|Bacteria,1QUN7@1224|Proteobacteria,2U718@28211|Alphaproteobacteria,3JY4Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Response regulator receiver	MA20_29145	-	-	-	-	-	-	-	-	-	-	-	Response_reg
SX1_k127_2129045_2	1297865.APJD01000001_gene5993	3.603e-221	691.0	COG0745@1|root,COG3920@1|root,COG0745@2|Bacteria,COG3920@2|Bacteria,1MVPJ@1224|Proteobacteria,2TSSQ@28211|Alphaproteobacteria,3JRJU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Histidine kinase-like ATPase domain	fsrR	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HATPase_c_2,HisKA_2,Response_reg
SX1_k127_2129045_4	1297865.APJD01000001_gene5994	0.0001409	46.0	2A5XG@1|root,30UPH@2|Bacteria,1R4CI@1224|Proteobacteria,2TSS2@28211|Alphaproteobacteria,3JVUC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2135025_7	1297865.APJD01000007_gene2174	3.046e-233	721.0	COG4774@1|root,COG4774@2|Bacteria,1MVZD@1224|Proteobacteria,2TS4K@28211|Alphaproteobacteria,3JR1J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	siderophore receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SX1_k127_2135025_6	1297865.APJD01000007_gene2173	5.205e-247	773.0	COG0031@1|root,COG0031@2|Bacteria,1MUR6@1224|Proteobacteria,2TRHT@28211|Alphaproteobacteria,3JRYM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Pyridoxal-phosphate dependent enzyme	-	-	2.5.1.47	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	M00021	R00897,R03601,R04859	RC00020,RC02814,RC02821	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
SX1_k127_2135025_15	1297865.APJD01000007_gene2172	2.159e-170	536.0	COG1414@1|root,COG1414@2|Bacteria,1Q7BI@1224|Proteobacteria,2TUY4@28211|Alphaproteobacteria,3JRXR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_IclR,IclR
SX1_k127_2135025_12	1297865.APJD01000007_gene2171	3.848e-185	578.0	COG3185@1|root,COG3185@2|Bacteria,1N5EF@1224|Proteobacteria	1224|Proteobacteria	E	Glyoxalase-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase_3
SX1_k127_2135025_19	1297865.APJD01000007_gene2170	1.66e-147	469.0	COG1794@1|root,COG1794@2|Bacteria,1MV03@1224|Proteobacteria,2TRKQ@28211|Alphaproteobacteria,3JW33@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Asp/Glu/Hydantoin racemase	-	-	5.1.1.13	ko:K01779	ko00250,ko01054,map00250,map01054	-	R00491	RC00302	ko00000,ko00001,ko01000	-	-	-	Asp_Glu_race
SX1_k127_2135025_14	1297865.APJD01000007_gene2169	1.253e-176	556.0	COG4120@1|root,COG4120@2|Bacteria,1MXGE@1224|Proteobacteria,2TUWW@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Belongs to the binding-protein-dependent transport system permease family	-	-	-	ko:K05832	-	M00247	-	-	ko00000,ko00002,ko02000	-	-	-	BPD_transp_2
SX1_k127_2135025_18	1297865.APJD01000007_gene2168	2.405e-151	487.0	COG1101@1|root,COG1101@2|Bacteria,1MVDM@1224|Proteobacteria,2TTDS@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	ABC transporter	-	-	-	ko:K05833	-	M00247	-	-	ko00000,ko00002,ko02000	-	-	-	ABC_tran
SX1_k127_2135025_10	1297865.APJD01000007_gene2167	1.035e-198	624.0	COG2984@1|root,COG2984@2|Bacteria,1MW5D@1224|Proteobacteria,2TSG1@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	transport system periplasmic component	-	-	-	ko:K01989	-	M00247	-	-	ko00000,ko00002,ko02000	-	-	-	ABC_sub_bind
SX1_k127_2135025_8	1297865.APJD01000007_gene2166	9.744e-222	694.0	COG0604@1|root,COG0604@2|Bacteria,1MX8A@1224|Proteobacteria,2TUVG@28211|Alphaproteobacteria,3JTCJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Zinc-binding dehydrogenase	-	-	1.1.1.1	ko:K00001	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	-	R00623,R00754,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310	RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_zinc_N
SX1_k127_2135025_2	1297865.APJD01000007_gene2165	0.0	1192.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JSR7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	MA20_09220	-	-	ko:K00666	-	-	-	-	ko00000,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_2135025_25	1297865.APJD01000007_gene2164	6.583e-93	312.0	COG2050@1|root,COG2050@2|Bacteria,1RDVV@1224|Proteobacteria,2UANF@28211|Alphaproteobacteria,3K1BX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Thioesterase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	4HBT
SX1_k127_2135025_3	1297865.APJD01000007_gene2163	0.0	1172.0	COG1960@1|root,COG1960@2|Bacteria,1MU20@1224|Proteobacteria,2TQJS@28211|Alphaproteobacteria,3JR5D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	acyl-CoA dehydrogenase	mmgC	-	1.3.8.1,1.3.8.7	ko:K00248,ko:K00249,ko:K20035	ko00071,ko00280,ko00410,ko00640,ko00650,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map00650,map00920,map01100,map01110,map01120,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01178,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754,R11130	RC00052,RC00068,RC00076,RC00095,RC00120,RC00148,RC00246,RC03363	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_C,Acyl-CoA_dh_M,Acyl-CoA_dh_N,AcylCoA_DH_N
SX1_k127_2135025_5	1297865.APJD01000007_gene2162	1.34e-300	924.0	COG4961@1|root,COG4961@2|Bacteria,1NN97@1224|Proteobacteria,2TS6W@28211|Alphaproteobacteria,3JVNP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Putative Flp pilus-assembly TadE/G-like	-	-	-	-	-	-	-	-	-	-	-	-	Tad
SX1_k127_2135025_23	1297865.APJD01000007_gene2161	4.009e-110	357.0	COG4961@1|root,COG4961@2|Bacteria,1N3XK@1224|Proteobacteria,2U5EP@28211|Alphaproteobacteria,3K68F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	TadE-like protein	-	-	-	-	-	-	-	-	-	-	-	-	TadE
SX1_k127_2135025_21	1297865.APJD01000007_gene2160	1.59e-127	412.0	COG4961@1|root,COG4961@2|Bacteria,1N744@1224|Proteobacteria,2UGR2@28211|Alphaproteobacteria,3JUY7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	TadE-like protein	-	-	-	-	-	-	-	-	-	-	-	-	TadE
SX1_k127_2135025_17	1297865.APJD01000007_gene2159	7.348e-153	483.0	COG0346@1|root,COG0346@2|Bacteria,1MXZY@1224|Proteobacteria,2U2AQ@28211|Alphaproteobacteria,3JWWA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
SX1_k127_2135025_20	1297865.APJD01000007_gene2158	4.187e-142	452.0	29FKD@1|root,302I2@2|Bacteria,1R4W3@1224|Proteobacteria,2U13S@28211|Alphaproteobacteria,3JWAQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2135025_13	1297865.APJD01000007_gene2157	1.681e-184	578.0	COG0583@1|root,COG0583@2|Bacteria,1Q8UG@1224|Proteobacteria,2U10W@28211|Alphaproteobacteria,3JSDJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	ko:K05817	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
SX1_k127_2135025_22	1297865.APJD01000007_gene2156	8.244e-120	386.0	COG2318@1|root,COG2318@2|Bacteria,1R974@1224|Proteobacteria,2U4ZA@28211|Alphaproteobacteria,3JQW4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	DinB family	-	-	-	-	-	-	-	-	-	-	-	-	DinB
SX1_k127_2135025_0	1297865.APJD01000007_gene2155	0.0	1440.0	COG1529@1|root,COG1529@2|Bacteria,1MUEA@1224|Proteobacteria,2TRFN@28211|Alphaproteobacteria,3JSKD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	1.17.1.4	ko:K11177	ko00230,ko01100,ko01120,map00230,map01100,map01120	M00546	R01768,R02103	RC00143	ko00000,ko00001,ko00002,ko01000	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2
SX1_k127_2135025_11	1297865.APJD01000007_gene2154	1.893e-195	614.0	COG1319@1|root,COG1319@2|Bacteria,1MVJS@1224|Proteobacteria,2TRAR@28211|Alphaproteobacteria,3JR53@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	1.17.1.4,1.3.7.9	ko:K04109,ko:K11178	ko00230,ko00362,ko00627,ko01100,ko01120,ko01220,map00230,map00362,map00627,map01100,map01120,map01220	M00546	R01768,R02103,R05316	RC00143,RC00490	ko00000,ko00001,ko00002,ko01000	-	-	-	CO_deh_flav_C,FAD_binding_5
SX1_k127_2135025_24	1297865.APJD01000007_gene2153	7.963e-108	353.0	COG2080@1|root,COG2080@2|Bacteria,1MY3F@1224|Proteobacteria,2TRGH@28211|Alphaproteobacteria,3JX53@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	[2Fe-2S] binding domain	-	-	-	ko:K13483	ko00230,ko01100,ko01120,map00230,map01100,map01120	M00546	R01768,R02103	RC00143	ko00000,ko00001,ko00002	-	-	-	Fer2,Fer2_2
SX1_k127_2135025_16	1297865.APJD01000007_gene2152	5.252e-153	487.0	COG1024@1|root,COG1024@2|Bacteria,1Q67Q@1224|Proteobacteria,2U2T5@28211|Alphaproteobacteria,3JRE3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	-	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_2135025_4	1297865.APJD01000007_gene2151	0.0	1127.0	COG0737@1|root,COG0737@2|Bacteria,1MX03@1224|Proteobacteria,2TTUP@28211|Alphaproteobacteria,3JTA0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Belongs to the 5'-nucleotidase family	MA20_07595	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006195,GO:0006213,GO:0006259,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007155,GO:0007159,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009164,GO:0009166,GO:0009987,GO:0016020,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0018130,GO:0019362,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0022610,GO:0031974,GO:0031981,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042578,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046135,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0051186,GO:0055086,GO:0070013,GO:0071704,GO:0071944,GO:0072521,GO:0072523,GO:0072524,GO:0072527,GO:0072529,GO:0090304,GO:0098609,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658	3.1.3.5,3.6.1.45	ko:K01081,ko:K11751	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110	-	R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346	RC00017	ko00000,ko00001,ko01000	-	-	-	5_nucleotid_C,LysM,Metallophos
SX1_k127_2135025_9	1297865.APJD01000007_gene2150	1.351e-207	646.0	COG0123@1|root,COG0123@2|Bacteria,1MU7P@1224|Proteobacteria,2TSX9@28211|Alphaproteobacteria,3JRBX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	BQ	Histone deacetylase domain	MA20_07590	-	-	ko:K04768	-	-	-	-	ko00000	-	-	-	Hist_deacetyl
SX1_k127_2135025_26	1297865.APJD01000007_gene2149	5.877e-42	155.0	COG1722@1|root,COG1722@2|Bacteria,1PTYQ@1224|Proteobacteria,2UFD6@28211|Alphaproteobacteria,3K0ER@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides	xseB	-	3.1.11.6	ko:K03602	ko03430,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exonuc_VII_S
SX1_k127_2135025_1	398525.KB900701_gene3322	0.0	1263.0	COG1154@1|root,COG1154@2|Bacteria,1MUSJ@1224|Proteobacteria,2TRDD@28211|Alphaproteobacteria,3JSDV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)	dxs	-	2.2.1.7	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	M00096	R05636	RC00032	ko00000,ko00001,ko00002,ko01000	-	-	-	DXP_synthase_N,Transket_pyr,Transketolase_C
SX1_k127_2137459_0	1297865.APJD01000014_gene670	0.0	1177.0	COG3696@1|root,COG3696@2|Bacteria,1NUIV@1224|Proteobacteria,2TRWM@28211|Alphaproteobacteria,3JRJE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K15726	-	-	-	-	ko00000,ko02000	2.A.6.1.2	-	-	ACR_tran
SX1_k127_2137459_1	1297865.APJD01000014_gene671	1.762e-320	983.0	COG1538@1|root,COG1538@2|Bacteria,1MUA8@1224|Proteobacteria,2TVDE@28211|Alphaproteobacteria,3JSET@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	MU	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	OEP
SX1_k127_2137459_2	1297865.APJD01000014_gene672	6.556e-248	765.0	COG4663@1|root,COG4663@2|Bacteria,1MVMD@1224|Proteobacteria,2TS4J@28211|Alphaproteobacteria,3JW51@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Part of the tripartite ATP-independent periplasmic (TRAP) transport system	-	-	-	-	-	-	-	-	-	-	-	-	DctP
SX1_k127_2137459_3	1297865.APJD01000014_gene673	1.721e-238	739.0	COG4663@1|root,COG4663@2|Bacteria,1MVMD@1224|Proteobacteria,2TS4J@28211|Alphaproteobacteria,3JQN4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Part of the tripartite ATP-independent periplasmic (TRAP) transport system	MA20_25950	-	-	-	-	-	-	-	-	-	-	-	DctP,TAT_signal
SX1_k127_2137459_8	1297865.APJD01000014_gene674	1.72e-34	135.0	2B594@1|root,31Y37@2|Bacteria,1NF53@1224|Proteobacteria,2UICB@28211|Alphaproteobacteria,3K1IF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2137459_4	398525.KB900701_gene4227	2.225e-226	711.0	COG0489@1|root,COG0489@2|Bacteria,1MU7R@1224|Proteobacteria,2TRDM@28211|Alphaproteobacteria,3JRSI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP	mrp	-	-	ko:K03593	-	-	-	-	ko00000,ko03029,ko03036	-	-	-	FeS_assembly_P,ParA
SX1_k127_2137459_7	1297865.APJD01000014_gene676	2.19e-91	304.0	COG0346@1|root,COG0346@2|Bacteria,1N7R0@1224|Proteobacteria,2U4YP@28211|Alphaproteobacteria,3JWQ0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	MA20_25940	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
SX1_k127_2137459_6	1230476.C207_02011	1.175e-182	576.0	COG2084@1|root,COG2084@2|Bacteria,1MUGU@1224|Proteobacteria,2TT50@28211|Alphaproteobacteria,3JS5I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase	MA20_25935	-	1.1.1.31,1.1.1.60	ko:K00020,ko:K00042	ko00280,ko00630,ko01100,map00280,map00630,map01100	-	R01745,R01747,R05066	RC00099	ko00000,ko00001,ko01000	-	-	-	NAD_binding_11,NAD_binding_2
SX1_k127_2137459_5	1297865.APJD01000014_gene678	3.816e-214	666.0	COG1620@1|root,COG1620@2|Bacteria,1R6RM@1224|Proteobacteria,2U2C9@28211|Alphaproteobacteria,3JUSC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	L-lactate permease	-	-	-	ko:K03303	-	-	-	-	ko00000,ko02000	2.A.14	-	-	Lactate_perm
SX1_k127_2152551_0	1297865.APJD01000020_gene271	3.039e-311	955.0	COG1249@1|root,COG1249@2|Bacteria,1MU2U@1224|Proteobacteria,2TR8H@28211|Alphaproteobacteria,3JR1F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	lpdA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	1.8.1.4	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00036,M00307,M00532	R00209,R01221,R01698,R03815,R07618,R08549	RC00004,RC00022,RC00583,RC02742,RC02833,RC02834	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pyr_redox_2,Pyr_redox_dim
SX1_k127_2152551_7	1297865.APJD01000020_gene270	1.916e-26	108.0	2AQNP@1|root,31FW4@2|Bacteria,1NFF2@1224|Proteobacteria,2UIT7@28211|Alphaproteobacteria,3K1ET@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2152551_2	1297865.APJD01000020_gene269	1.188e-271	849.0	COG0508@1|root,COG0508@2|Bacteria,1MUGY@1224|Proteobacteria,2TRXM@28211|Alphaproteobacteria,3JRK6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)	pdhC	-	1.2.4.1,2.3.1.12	ko:K00162,ko:K00627	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	M00307	R00014,R00209,R01699,R02569,R03270	RC00004,RC00027,RC00627,RC02742,RC02744,RC02857,RC02882	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
SX1_k127_2152551_6	1297865.APJD01000020_gene268	1.46e-52	205.0	2EHG6@1|root,33B82@2|Bacteria,1RJAB@1224|Proteobacteria,2U93D@28211|Alphaproteobacteria,3JZHH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF5076)	MA20_41735	-	-	-	-	-	-	-	-	-	-	-	DUF5076
SX1_k127_2152551_1	1297865.APJD01000020_gene267	1.032e-287	886.0	COG0022@1|root,COG0022@2|Bacteria,1R8KB@1224|Proteobacteria,2TRMR@28211|Alphaproteobacteria,3JQYJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)	pdhB	-	1.2.4.1	ko:K00162	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	M00307	R00014,R00209,R01699,R03270	RC00004,RC00027,RC00627,RC02742,RC02744,RC02882	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_lipoyl,Transket_pyr,Transketolase_C
SX1_k127_2152551_3	1297865.APJD01000020_gene266	6.313e-221	686.0	COG1071@1|root,COG1071@2|Bacteria,1MU5R@1224|Proteobacteria,2TRSS@28211|Alphaproteobacteria,3JS9V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)	pdhA	-	1.2.4.1	ko:K00161	ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230	M00307	R00014,R00209,R01699,R03270	RC00004,RC00027,RC00627,RC02742,RC02744,RC02882	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	E1_dh
SX1_k127_2152551_5	1297865.APJD01000020_gene265	1.96e-57	201.0	COG2919@1|root,COG2919@2|Bacteria,1N8WI@1224|Proteobacteria,2UGEU@28211|Alphaproteobacteria,3JZFR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Septum formation initiator	MA20_41765	-	-	-	-	-	-	-	-	-	-	-	DivIC
SX1_k127_2152551_4	1297865.APJD01000020_gene264	3.927e-87	287.0	COG0431@1|root,COG0431@2|Bacteria,1RAFI@1224|Proteobacteria,2TUBI@28211|Alphaproteobacteria,3JVXT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	NADPH-dependent FMN reductase	yieF	-	-	ko:K19784	-	-	-	-	ko00000	-	-	-	FMN_red
SX1_k127_2157535_3	1297865.APJD01000010_gene4840	8.761e-17	80.0	2A6VF@1|root,30VPZ@2|Bacteria,1RAZ8@1224|Proteobacteria,2U5J6@28211|Alphaproteobacteria,3JYM1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2157535_2	1297865.APJD01000010_gene4839	7.774e-43	158.0	2E48M@1|root,32Z4G@2|Bacteria,1N6NZ@1224|Proteobacteria,2UH8Q@28211|Alphaproteobacteria,3K0JE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_36460	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2157535_0	1297865.APJD01000010_gene4838	1.857e-73	247.0	29VSU@1|root,30HAF@2|Bacteria,1MYVY@1224|Proteobacteria,2UACB@28211|Alphaproteobacteria,3JZX5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2157535_1	1297865.APJD01000010_gene4837	7.387e-71	242.0	COG0845@1|root,COG0845@2|Bacteria,1MX8W@1224|Proteobacteria,2TRPM@28211|Alphaproteobacteria,3JQVP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K15727	-	-	-	-	ko00000,ko02000	8.A.1.2.1	-	-	HlyD_D23
SX1_k127_2160003_3	1297865.APJD01000014_gene731	1.037e-91	301.0	COG0346@1|root,COG0346@2|Bacteria,1N1QT@1224|Proteobacteria,2TU6X@28211|Alphaproteobacteria,3JST8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	lactoylglutathione lyase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2160003_1	1297865.APJD01000014_gene730	5e-324	992.0	28HF6@1|root,2Z7RB@2|Bacteria,1P254@1224|Proteobacteria,2TSDA@28211|Alphaproteobacteria,3JS78@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Alginate export	-	-	-	-	-	-	-	-	-	-	-	-	Alginate_exp
SX1_k127_2160003_2	1297865.APJD01000014_gene729	7.568e-130	416.0	COG3619@1|root,COG3619@2|Bacteria,1R5V0@1224|Proteobacteria,2TVAE@28211|Alphaproteobacteria,3JWCU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1275)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1275
SX1_k127_2160003_0	1297865.APJD01000014_gene728	0.0	1007.0	COG1538@1|root,COG1538@2|Bacteria,1MUA8@1224|Proteobacteria,2TVDE@28211|Alphaproteobacteria,3JSET@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	MU	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	OEP
SX1_k127_217164_4	318996.AXAZ01000153_gene1690	6.168e-07	54.0	COG2801@1|root,COG2801@2|Bacteria,1N207@1224|Proteobacteria,2UEQQ@28211|Alphaproteobacteria,3JWDD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K07497	-	-	-	-	ko00000	-	-	-	HTH_32,rve,rve_3
SX1_k127_217164_1	1297865.APJD01000019_gene3326	2.489e-202	629.0	COG0596@1|root,COG0596@2|Bacteria,1MXH8@1224|Proteobacteria,2U12P@28211|Alphaproteobacteria,3JSWC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6
SX1_k127_217164_0	1297865.APJD01000019_gene3325	7.895e-247	768.0	COG1940@1|root,COG1940@2|Bacteria,1MVCI@1224|Proteobacteria,2TUPT@28211|Alphaproteobacteria,3JTQG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	GK	carbohydrate kinase activity	-	-	-	-	-	-	-	-	-	-	-	-	ROK
SX1_k127_217164_2	1297865.APJD01000019_gene3324	5.735e-50	177.0	COG0300@1|root,COG0300@2|Bacteria,1MWNZ@1224|Proteobacteria,2TTFS@28211|Alphaproteobacteria,3JSV1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	KR domain	-	-	-	ko:K07124	-	-	-	-	ko00000	-	-	-	adh_short
SX1_k127_21720_0	1297865.APJD01000007_gene2256	1.16e-229	713.0	COG1960@1|root,COG1960@2|Bacteria,1MW97@1224|Proteobacteria,2TUS1@28211|Alphaproteobacteria,3JRWA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_2,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_21720_2	1179778.PMM47T1_22857	1.189e-107	368.0	COG1116@1|root,COG1116@2|Bacteria,1MUDV@1224|Proteobacteria,1RZUK@1236|Gammaproteobacteria	1236|Gammaproteobacteria	P	(ABC) transporter	-	-	-	ko:K02049	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	ABC_tran
SX1_k127_21720_1	1297865.APJD01000007_gene2254	2.889e-218	678.0	COG0600@1|root,COG0600@2|Bacteria,1MXRM@1224|Proteobacteria,2TSP7@28211|Alphaproteobacteria,3JQZD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K02050	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	BPD_transp_1
SX1_k127_21720_3	1040989.AWZU01000015_gene2686	9.586e-37	142.0	COG0715@1|root,COG0715@2|Bacteria,1MW0S@1224|Proteobacteria,2TV7D@28211|Alphaproteobacteria,3JRYU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NMT1-like family	-	-	-	ko:K02051	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	NMT1,NMT1_2
SX1_k127_2173818_9	1297865.APJD01000007_gene2067	5.318e-44	160.0	COG0477@1|root,COG2814@2|Bacteria,1MW19@1224|Proteobacteria,2TRJ1@28211|Alphaproteobacteria,3JRV5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	drug resistance transporter, Bcr CflA	MA20_32310	-	-	ko:K07552	-	-	-	-	ko00000,ko02000	2.A.1.2	-	-	MFS_1
SX1_k127_2173818_7	1297865.APJD01000007_gene2066	2.972e-88	293.0	COG5349@1|root,COG5349@2|Bacteria,1MZDD@1224|Proteobacteria,2UCM4@28211|Alphaproteobacteria,3JY5Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF983)	-	-	-	-	-	-	-	-	-	-	-	-	DUF983
SX1_k127_2173818_1	1230476.C207_00473	1.082e-282	871.0	COG1167@1|root,COG1167@2|Bacteria,1MUJE@1224|Proteobacteria,2TQZZ@28211|Alphaproteobacteria,3JSVE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix gluconate operon transcriptional repressor	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_1_2,GntR
SX1_k127_2173818_3	1297865.APJD01000007_gene2064	2.849e-282	869.0	COG1680@1|root,COG1680@2|Bacteria,1MVPR@1224|Proteobacteria,2TRWZ@28211|Alphaproteobacteria,3JU23@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SX1_k127_2173818_10	1297865.APJD01000007_gene2063	8.392e-28	115.0	2AGXF@1|root,3175Z@2|Bacteria,1NJ6A@1224|Proteobacteria,2UMA1@28211|Alphaproteobacteria,3K22M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2173818_6	398525.KB900701_gene3235	1.446e-197	619.0	COG3386@1|root,COG3386@2|Bacteria,1MXB7@1224|Proteobacteria,2U2RZ@28211|Alphaproteobacteria,3JVA8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	PFAM SMP-30 Gluconolaconase	-	-	-	-	-	-	-	-	-	-	-	-	SGL
SX1_k127_2173818_4	1297865.APJD01000007_gene2061	4.18e-268	826.0	COG0607@1|root,COG2897@1|root,COG0607@2|Bacteria,COG2897@2|Bacteria,1MU3V@1224|Proteobacteria,2TSGP@28211|Alphaproteobacteria,3JQYG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rhodanese Homology Domain	MA20_21580	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
SX1_k127_2173818_2	1230476.C207_00470	2.069e-282	867.0	COG0448@1|root,COG0448@2|Bacteria,1MVTC@1224|Proteobacteria,2TR6D@28211|Alphaproteobacteria,3JUM7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans	glgC	-	2.7.7.27	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	M00565	R00948	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	NTP_transferase
SX1_k127_2173818_0	1297865.APJD01000007_gene2059	6.939e-317	976.0	COG0297@1|root,COG0297@2|Bacteria,1MUGM@1224|Proteobacteria,2TT73@28211|Alphaproteobacteria,3JRIN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Synthesizes alpha-1,4-glucan chains using ADP-glucose	glgA	GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0071704,GO:1901576	2.4.1.21	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	M00565	R02421	RC00005	ko00000,ko00001,ko00002,ko01000,ko01003	-	GT5	-	Glyco_transf_5,Glycos_transf_1
SX1_k127_2173818_8	1297865.APJD01000007_gene2058	5.096e-67	228.0	2AA4C@1|root,30ZD8@2|Bacteria,1RKJD@1224|Proteobacteria,2UASR@28211|Alphaproteobacteria,3JZRP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2173818_5	1297865.APJD01000007_gene2057	1.629e-242	751.0	COG1680@1|root,COG1680@2|Bacteria,1MY01@1224|Proteobacteria,2U35E@28211|Alphaproteobacteria,3JWCA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase	ampC	-	3.5.2.6	ko:K01467	ko01501,ko02020,map01501,map02020	M00628	R06363	RC01499	ko00000,ko00001,ko00002,ko01000	-	-	-	Beta-lactamase
SX1_k127_2176150_2	1297865.APJD01000003_gene6212	2.424e-115	374.0	COG2244@1|root,COG2244@2|Bacteria,1MW2I@1224|Proteobacteria,2U2CQ@28211|Alphaproteobacteria,3JXUY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Polysaccharide biosynthesis protein	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_synt
SX1_k127_2176150_1	1297865.APJD01000003_gene6213	3.745e-277	859.0	COG3206@1|root,COG3206@2|Bacteria,1R43V@1224|Proteobacteria,2U2I8@28211|Alphaproteobacteria,3JT3J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	G-rich domain on putative tyrosine kinase	-	-	-	-	-	-	-	-	-	-	-	-	GNVR,Wzz
SX1_k127_2176150_0	1297865.APJD01000003_gene6214	7.527e-281	875.0	COG3307@1|root,COG3307@2|Bacteria,1R5EX@1224|Proteobacteria,2TTQF@28211|Alphaproteobacteria,3JTQN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	O-Antigen ligase	-	-	-	-	-	-	-	-	-	-	-	-	Wzy_C
SX1_k127_2176150_3	1510531.JQJJ01000015_gene3084	4.195e-108	356.0	COG0726@1|root,COG0726@2|Bacteria,1R881@1224|Proteobacteria,2U1Y9@28211|Alphaproteobacteria,3JWF1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
SX1_k127_2176150_4	1297865.APJD01000003_gene6216	2.166e-71	243.0	COG0438@1|root,COG0438@2|Bacteria,1NB81@1224|Proteobacteria,2U3N3@28211|Alphaproteobacteria,3K615@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
SX1_k127_2179676_0	1297865.APJD01000005_gene3580	8.599e-262	808.0	COG0683@1|root,COG0683@2|Bacteria,1MWQB@1224|Proteobacteria,2U0KM@28211|Alphaproteobacteria,3JT54@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	MA20_16480	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_2179676_2	1230476.C207_02378	5.742e-168	533.0	COG0559@1|root,COG0559@2|Bacteria,1N5XH@1224|Proteobacteria,2TSH5@28211|Alphaproteobacteria,3JS0U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	MA20_16475	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_2179676_1	1297865.APJD01000005_gene3582	7.421e-203	648.0	COG4177@1|root,COG4177@2|Bacteria,1MU52@1224|Proteobacteria,2TSUI@28211|Alphaproteobacteria,3JUMZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	-	-	-	ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_2179676_3	1297865.APJD01000005_gene3583	6.233e-135	435.0	COG0411@1|root,COG0411@2|Bacteria,1MUFT@1224|Proteobacteria,2U22X@28211|Alphaproteobacteria,3JRTA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid ATP-binding cassette transporter	MA20_16465	-	-	ko:K01995	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_21845_1	1297865.APJD01000011_gene6576	1.171e-104	341.0	2CJVH@1|root,2Z82D@2|Bacteria,1MX2M@1224|Proteobacteria,2TTCY@28211|Alphaproteobacteria,3JSEN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_19455	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	-
SX1_k127_21845_0	1297865.APJD01000011_gene6575	1.452e-178	560.0	COG1502@1|root,COG1502@2|Bacteria,1R4EZ@1224|Proteobacteria,2U0UJ@28211|Alphaproteobacteria,3JXRX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	PLD-like domain	-	-	-	-	-	-	-	-	-	-	-	-	PLDc_2
SX1_k127_2205318_5	1297865.APJD01000003_gene6236	2.618e-24	103.0	2CAN2@1|root,32RI0@2|Bacteria,1QW5V@1224|Proteobacteria,2U5R8@28211|Alphaproteobacteria,3JY2K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2205318_0	1297865.APJD01000003_gene6235	0.0	1246.0	COG3746@1|root,COG3746@2|Bacteria,1MV8P@1224|Proteobacteria,2U14X@28211|Alphaproteobacteria,3JRRR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Putative porin	-	-	-	-	-	-	-	-	-	-	-	-	Porin_5
SX1_k127_2205318_2	1297865.APJD01000003_gene6234	3.065e-160	512.0	COG0810@1|root,COG0810@2|Bacteria,1PKC7@1224|Proteobacteria,2U1DP@28211|Alphaproteobacteria,3JV2X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	TonB C terminal	-	-	-	-	-	-	-	-	-	-	-	-	TonB_2
SX1_k127_2205318_3	1297865.APJD01000003_gene6233	1.414e-102	341.0	29E0M@1|root,300YK@2|Bacteria,1N5IK@1224|Proteobacteria,2UCHR@28211|Alphaproteobacteria,3K07Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2205318_4	1297865.APJD01000003_gene6232	1.027e-73	256.0	COG0848@1|root,COG0848@2|Bacteria,1RKPI@1224|Proteobacteria,2U5GE@28211|Alphaproteobacteria,3JYAX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Biopolymer transport protein ExbD/TolR	-	-	-	ko:K03559	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	ExbD
SX1_k127_2205318_1	1297865.APJD01000003_gene6231	3.018e-268	828.0	COG0811@1|root,COG0811@2|Bacteria,1N2RJ@1224|Proteobacteria,2TRZI@28211|Alphaproteobacteria,3JUND@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Domain of unknown function (DUF2341)	-	-	-	ko:K03561	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	DUF2341,Laminin_G_3,MotA_ExbB
SX1_k127_2205839_15	1297865.APJD01000032_gene1642	4.119e-07	54.0	COG2021@1|root,COG2021@2|Bacteria,1MVJV@1224|Proteobacteria,2U4YK@28211|Alphaproteobacteria,3JT2R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	alpha/beta hydrolase fold	-	-	2.3.1.31	ko:K00641	ko00270,ko01100,ko01130,map00270,map01100,map01130	-	R01776	RC00004,RC00041	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1
SX1_k127_2205839_5	1297865.APJD01000032_gene1643	3.802e-89	300.0	COG3631@1|root,COG3631@2|Bacteria,1R9TX@1224|Proteobacteria,2U1ZV@28211|Alphaproteobacteria,3JRPB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SnoaL-like polyketide cyclase	-	-	-	ko:K06893	-	-	-	-	ko00000	-	-	-	SnoaL_2
SX1_k127_2205839_9	1297865.APJD01000032_gene1644	6.024e-56	198.0	2AD80@1|root,312WZ@2|Bacteria,1N4T3@1224|Proteobacteria,2UBZY@28211|Alphaproteobacteria,3K0IS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2205839_6	172088.AUGA01000044_gene6948	6.338e-84	280.0	COG3631@1|root,COG3631@2|Bacteria,1RBYP@1224|Proteobacteria,2U5DA@28211|Alphaproteobacteria,3JYF6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SnoaL-like domain	MA20_05325	-	-	-	-	-	-	-	-	-	-	-	SnoaL_2
SX1_k127_2205839_1	1297865.APJD01000032_gene1646	9.314e-182	574.0	2ETDR@1|root,33KXI@2|Bacteria,1N8C5@1224|Proteobacteria,2U178@28211|Alphaproteobacteria,3JSQ5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2205839_7	1297865.APJD01000032_gene1647	1.036e-76	259.0	2FCGW@1|root,344KB@2|Bacteria,1RB9V@1224|Proteobacteria,2U6BG@28211|Alphaproteobacteria,3JYBZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_05335	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2205839_12	1297865.APJD01000032_gene1648	4.375e-22	96.0	2AE0V@1|root,313TH@2|Bacteria,1N80P@1224|Proteobacteria,2UHTQ@28211|Alphaproteobacteria,3K152@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2205839_13	1297865.APJD01000032_gene1649	1.472e-20	93.0	2BP91@1|root,32I0K@2|Bacteria,1NGX9@1224|Proteobacteria,2UGT9@28211|Alphaproteobacteria,3K0ZU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_05340	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2205839_3	1297865.APJD01000032_gene1650	4.999e-102	332.0	COG2030@1|root,COG2030@2|Bacteria,1RIBV@1224|Proteobacteria,2U3XU@28211|Alphaproteobacteria,3JR2D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	N-terminal half of MaoC dehydratase	MA20_05345	-	-	-	-	-	-	-	-	-	-	-	MaoC_dehydrat_N,MaoC_dehydratas
SX1_k127_2205839_4	1297865.APJD01000032_gene1651	4.64e-96	319.0	COG2030@1|root,COG2030@2|Bacteria,1RIBV@1224|Proteobacteria,2U9QR@28211|Alphaproteobacteria,3JY1N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	MaoC like domain	MA20_05350	-	-	-	-	-	-	-	-	-	-	-	MaoC_dehydratas
SX1_k127_2205839_10	1297865.APJD01000032_gene1652	5.709e-54	190.0	2E86V@1|root,332K3@2|Bacteria,1RIS4@1224|Proteobacteria,2U9AV@28211|Alphaproteobacteria,3JZHW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF4282)	MA20_05355	-	-	-	-	-	-	-	-	-	-	-	DUF4282
SX1_k127_2205839_14	1297865.APJD01000032_gene1653	9.582e-16	79.0	2AG6W@1|root,316BX@2|Bacteria,1NH68@1224|Proteobacteria,2UJC7@28211|Alphaproteobacteria,3K1V9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2205839_2	1230476.C207_06836	1.044e-137	439.0	COG1192@1|root,COG1192@2|Bacteria,1MWH3@1224|Proteobacteria,2U100@28211|Alphaproteobacteria,3JU41@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	AAA domain	MA20_05060	-	-	ko:K03496	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	AAA_31,CbiA
SX1_k127_2205839_8	1297865.APJD01000032_gene1655	2.233e-61	213.0	2DNNN@1|root,32YAU@2|Bacteria,1NA5K@1224|Proteobacteria,2UFEY@28211|Alphaproteobacteria,3JZYF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2205839_11	1297865.APJD01000032_gene1656	5.99e-54	190.0	2EHBN@1|root,33B3H@2|Bacteria,1RHRG@1224|Proteobacteria,2U95X@28211|Alphaproteobacteria,3JZJ4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2205839_0	1297865.APJD01000032_gene1657	4.328e-197	619.0	COG1075@1|root,COG4995@1|root,COG1075@2|Bacteria,COG4995@2|Bacteria,1MUIQ@1224|Proteobacteria,2U1J0@28211|Alphaproteobacteria,3K177@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	CHAT domain	-	-	-	-	-	-	-	-	-	-	-	-	CHAT,LCAT
SX1_k127_220740_2	1297865.APJD01000033_gene7010	1.565e-155	492.0	COG1063@1|root,COG1063@2|Bacteria,1MZ0B@1224|Proteobacteria,2U2M9@28211|Alphaproteobacteria,3JZY8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Alcohol dehydrogenase GroES-like domain	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N
SX1_k127_220740_1	1297865.APJD01000033_gene7009	1.997e-198	619.0	COG0152@1|root,COG0152@2|Bacteria,1MUR9@1224|Proteobacteria,2TS0T@28211|Alphaproteobacteria,3JRJ7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	phosphoribosylaminoimidazole-succinocarboxamide synthase	purC2	GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.2.6	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04591	RC00064,RC00162	ko00000,ko00001,ko00002,ko01000	-	-	-	SAICAR_synt
SX1_k127_220740_0	1297865.APJD01000033_gene7008	7.579e-208	648.0	COG1741@1|root,COG1741@2|Bacteria,1MWIP@1224|Proteobacteria,2TRHR@28211|Alphaproteobacteria,3JSBB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the pirin family	MA20_23765	-	-	ko:K06911	-	-	-	-	ko00000	-	-	-	Pirin,Pirin_C
SX1_k127_220740_3	1297865.APJD01000033_gene7007	6.407e-130	414.0	COG1670@1|root,COG1670@2|Bacteria,1RD77@1224|Proteobacteria,2U851@28211|Alphaproteobacteria,3JVPR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Acetyltransferase (GNAT) domain	-	-	2.3.1.128	ko:K03790	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Acetyltransf_3
SX1_k127_220740_4	1297865.APJD01000033_gene7006	1.669e-121	391.0	COG2207@1|root,COG2207@2|Bacteria,1P4M5@1224|Proteobacteria,2TSQV@28211|Alphaproteobacteria,3JU83@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
SX1_k127_2215716_1	1297865.APJD01000006_gene4431	8.401e-202	629.0	COG1235@1|root,COG1235@2|Bacteria,1MWI5@1224|Proteobacteria,2TQX4@28211|Alphaproteobacteria,3JRTT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	May be involved in the transport of PQQ or its precursor to the periplasm	pqqB	-	-	ko:K06136	-	-	-	-	ko00000	-	-	-	Lactamase_B_2
SX1_k127_2215716_5	1298867.AUES01000024_gene2904	3.717e-09	58.0	2AHDM@1|root,317QN@2|Bacteria,1NKES@1224|Proteobacteria,2UKG1@28211|Alphaproteobacteria,3K25Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PqqA family	-	-	-	-	-	-	-	-	-	-	-	-	PqqA
SX1_k127_2215716_3	1297865.APJD01000006_gene4433	6.989e-50	177.0	2CCN4@1|root,349FJ@2|Bacteria,1N40A@1224|Proteobacteria,2UDHX@28211|Alphaproteobacteria,3K0HB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_01090	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2215716_0	1297865.APJD01000006_gene4434	2.193e-282	868.0	COG2133@1|root,COG2133@2|Bacteria,1MVK5@1224|Proteobacteria,2TRN9@28211|Alphaproteobacteria,3JTUJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	GSDH,PBP
SX1_k127_2215716_2	1297865.APJD01000006_gene4435	2.59e-119	385.0	COG2863@1|root,COG2863@2|Bacteria,1N7W9@1224|Proteobacteria,2TSFV@28211|Alphaproteobacteria,3JRG8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome c	-	-	-	ko:K17230	ko00920,ko01120,map00920,map01120	-	R09499	-	ko00000,ko00001	-	-	-	Cytochrom_C,Cytochrome_CBB3
SX1_k127_2215716_4	1297865.APJD01000006_gene4436	1.961e-45	164.0	COG0154@1|root,COG0154@2|Bacteria,1MUKC@1224|Proteobacteria,2TTUD@28211|Alphaproteobacteria,3JQMY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the amidase family	MA20_01095	-	3.5.1.4	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	-	R02540,R03096,R03180,R03909,R05551,R05590	RC00010,RC00100,RC00950,RC01025	ko00000,ko00001,ko01000	-	-	-	Amidase
SX1_k127_2216512_0	1297865.APJD01000009_gene2968	3.31e-202	635.0	COG3181@1|root,COG3181@2|Bacteria,1N7C4@1224|Proteobacteria,2TTPJ@28211|Alphaproteobacteria,3JVV2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter family receptor	-	-	-	-	-	-	-	-	-	-	-	-	TctC
SX1_k127_2216512_1	1297865.APJD01000009_gene2967	1.192e-88	293.0	COG3255@1|root,COG3255@2|Bacteria,1RM64@1224|Proteobacteria,2U7YK@28211|Alphaproteobacteria,3JYZQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Sterol carrier protein	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2216512_2	1297865.APJD01000009_gene2966	1.354e-44	169.0	COG0596@1|root,COG0596@2|Bacteria,1NUT9@1224|Proteobacteria,2TVMS@28211|Alphaproteobacteria,3JT3H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
SX1_k127_2218919_7	1297865.APJD01000021_gene3073	1.719e-05	46.0	COG1770@1|root,COG1770@2|Bacteria,1MUED@1224|Proteobacteria,2TTR0@28211|Alphaproteobacteria,3JRTX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Prolyl oligopeptidase, N-terminal beta-propeller domain	ptrB	GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0070011,GO:0070012,GO:0071704,GO:0140096,GO:1901564	3.4.21.83	ko:K01354	ko05142,ko05143,map05142,map05143	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S9,Peptidase_S9_N
SX1_k127_2218919_0	1297865.APJD01000021_gene3072	0.0	1085.0	COG1178@1|root,COG1178@2|Bacteria,1MWEV@1224|Proteobacteria,2TVQS@28211|Alphaproteobacteria,3JV51@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02011	ko02010,map02010	M00190	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.10	-	-	BPD_transp_1
SX1_k127_2218919_2	1297865.APJD01000021_gene3071	7.707e-228	706.0	COG1840@1|root,COG1840@2|Bacteria,1MXZ8@1224|Proteobacteria,2V7DS@28211|Alphaproteobacteria,3JXI6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Bacterial extracellular solute-binding protein	-	-	-	-	-	-	-	-	-	-	-	-	SBP_bac_11,SBP_bac_6
SX1_k127_2218919_3	1297865.APJD01000021_gene3070	2.923e-221	689.0	COG3842@1|root,COG3842@2|Bacteria,1MU3I@1224|Proteobacteria,2TQMJ@28211|Alphaproteobacteria,3JVXD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	TOBE domain	-	-	3.6.3.30	ko:K02010	ko02010,map02010	M00190	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.10	-	-	ABC_tran,TOBE_2
SX1_k127_2218919_1	1230476.C207_06992	4.655e-254	785.0	COG0075@1|root,COG0075@2|Bacteria,1MWHJ@1224|Proteobacteria,2TQSN@28211|Alphaproteobacteria,3JRRY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Aminotransferase class-V	MA20_39235	-	2.6.1.44,2.6.1.45,2.6.1.51	ko:K00830	ko00250,ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko04146,map00250,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map04146	M00346,M00532	R00369,R00372,R00585,R00588	RC00006,RC00008,RC00018	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_5
SX1_k127_2218919_5	1297865.APJD01000021_gene3068	7.2e-183	572.0	COG0671@1|root,COG0671@2|Bacteria,1PX74@1224|Proteobacteria,2TUV9@28211|Alphaproteobacteria,3JV4I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	LssY C-terminus	-	-	-	-	-	-	-	-	-	-	-	-	LssY_C
SX1_k127_2218919_6	1297865.APJD01000021_gene3067	1.117e-162	512.0	COG1525@1|root,COG1525@2|Bacteria,1N145@1224|Proteobacteria,2UCUE@28211|Alphaproteobacteria,3JTEQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Staphylococcal nuclease homologue	MA20_39240	-	-	-	-	-	-	-	-	-	-	-	SNase
SX1_k127_2218919_4	1297865.APJD01000021_gene3066	1.641e-220	683.0	2EW85@1|root,33PM1@2|Bacteria,1MXDD@1224|Proteobacteria,2TU7X@28211|Alphaproteobacteria,3JWUG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_39245	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2226574_4	1297865.APJD01000014_gene563	5.214e-34	132.0	COG4977@1|root,COG4977@2|Bacteria,1MUDK@1224|Proteobacteria,2TVKR@28211|Alphaproteobacteria,3JSG5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	DJ-1/PfpI family	-	-	-	ko:K13633	-	-	-	-	ko00000,ko03000	-	-	-	DJ-1_PfpI,HTH_18
SX1_k127_2226574_0	1297865.APJD01000014_gene564	2.131e-209	655.0	COG0697@1|root,COG0697@2|Bacteria,1R6CU@1224|Proteobacteria,2UBDU@28211|Alphaproteobacteria,3K30J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_2226574_5	1230476.C207_07139	0.0003912	43.0	COG2220@1|root,COG2220@2|Bacteria,1MVP2@1224|Proteobacteria,2U2W2@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Beta-lactamase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_2,Lactamase_B_3
SX1_k127_2226574_2	1297865.APJD01000014_gene565	2.565e-152	483.0	COG0810@1|root,COG0810@2|Bacteria,1MZXC@1224|Proteobacteria,2U2BG@28211|Alphaproteobacteria,3JTCR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_2,TonB_C
SX1_k127_2226574_3	1297865.APJD01000014_gene566	4.132e-90	297.0	COG0848@1|root,COG0848@2|Bacteria,1RDJZ@1224|Proteobacteria,2U77T@28211|Alphaproteobacteria,3JZ71@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Outer membrane transport energization protein ExbD	exbD	-	-	ko:K03559,ko:K03560	-	-	-	-	ko00000,ko02000	1.A.30.2.1,1.A.30.2.2	-	-	ExbD
SX1_k127_2226574_1	1297865.APJD01000014_gene567	9.606e-163	514.0	COG0811@1|root,COG0811@2|Bacteria,1MXHR@1224|Proteobacteria,2TQNN@28211|Alphaproteobacteria,3JR8P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Outer membrane transport energization protein ExbB	exbB	-	-	ko:K03561	-	-	-	-	ko00000,ko02000	1.A.30.2.1	-	-	MotA_ExbB
SX1_k127_2233430_0	1297865.APJD01000007_gene1974	0.0	1170.0	COG0457@1|root,COG0457@2|Bacteria,1MYB8@1224|Proteobacteria,2TQV5@28211|Alphaproteobacteria,3JTV2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tetratricopeptide repeat	MA20_42300	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_19,TPR_2,TPR_6,TPR_7,TPR_8
SX1_k127_2233430_2	114615.BRADO3920	3.487e-05	47.0	COG4953@1|root,COG4953@2|Bacteria,1MUA9@1224|Proteobacteria,2TR2R@28211|Alphaproteobacteria,3JS2X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Penicillin-Binding Protein C-terminus Family	pbpC	-	2.4.1.129	ko:K05367	ko00550,map00550	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	BiPBP_C,Transgly,Transpeptidase
SX1_k127_2233430_1	1297865.APJD01000007_gene1975	1.154e-187	587.0	COG1947@1|root,COG1947@2|Bacteria,1MVU3@1224|Proteobacteria,2TUFV@28211|Alphaproteobacteria,3JQW5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol	ispE	GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515	2.7.1.148	ko:K00919	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05634	RC00002,RC01439	ko00000,ko00001,ko00002,ko01000	-	-	-	GHMP_kinases_C,GHMP_kinases_N
SX1_k127_2233430_3	1304877.KI519399_gene3301	8.326e-05	45.0	2A79Y@1|root,30W6M@2|Bacteria,1RD3K@1224|Proteobacteria,2U7AJ@28211|Alphaproteobacteria,3JYYU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2240747_4	1297865.APJD01000035_gene5466	2.865e-117	383.0	COG4567@1|root,COG4567@2|Bacteria,1RD7J@1224|Proteobacteria,2TSK7@28211|Alphaproteobacteria,3JTE4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Bacterial regulatory protein, Fis family	actR	-	-	ko:K15012	ko02020,map02020	M00523	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	HTH_8,Response_reg
SX1_k127_2240747_0	1297865.APJD01000035_gene5467	1.357e-282	869.0	COG0642@1|root,COG2205@2|Bacteria,1QV2U@1224|Proteobacteria,2TW9G@28211|Alphaproteobacteria,3JU8Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	His Kinase A (phosphoacceptor) domain	regB	-	2.7.13.3	ko:K15011	ko02020,map02020	M00523	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA
SX1_k127_2240747_2	1230476.C207_03796	9.283e-166	523.0	COG1131@1|root,COG1131@2|Bacteria,1MUX3@1224|Proteobacteria,2TSC5@28211|Alphaproteobacteria,3JQYP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	ATPases associated with a variety of cellular activities	MA20_23390	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
SX1_k127_2240747_1	1297865.APJD01000035_gene5469	1.908e-167	537.0	COG0842@1|root,COG0842@2|Bacteria,1MUF4@1224|Proteobacteria,2TRTS@28211|Alphaproteobacteria,3JSW7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	transport, permease protein	MA20_23385	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane
SX1_k127_2240747_3	1297865.APJD01000035_gene5470	5.666e-134	431.0	COG4553@1|root,COG4553@2|Bacteria,1MVUH@1224|Proteobacteria,2TQXW@28211|Alphaproteobacteria,3JTT6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	PHB de-polymerase C-terminus	phaZ	-	3.1.1.75	ko:K05973	ko00650,map00650	-	R05118	-	ko00000,ko00001,ko01000	-	-	-	PHB_depo_C
SX1_k127_2241279_8	1297865.APJD01000049_gene5517	2.461e-38	143.0	2AG22@1|root,3166B@2|Bacteria,1N9VT@1224|Proteobacteria,2UGD7@28211|Alphaproteobacteria,3K1VR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2241279_0	1297865.APJD01000049_gene5516	9.948e-291	894.0	COG1109@1|root,COG1109@2|Bacteria,1MU24@1224|Proteobacteria,2TQWH@28211|Alphaproteobacteria,3JS5S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate	glmM	-	5.4.2.10	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130	-	R02060	RC00408	ko00000,ko00001,ko01000	-	-	-	PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV
SX1_k127_2241279_1	1297865.APJD01000049_gene5515	2.763e-258	799.0	COG2223@1|root,COG2223@2|Bacteria,1MXAA@1224|Proteobacteria,2TS5Z@28211|Alphaproteobacteria,3JUAI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Major Facilitator Superfamily	fsr	-	-	ko:K08223	-	-	-	-	ko00000,ko02000	2.A.1.35	-	-	MFS_1
SX1_k127_2241279_4	1297865.APJD01000049_gene5514	1.987e-179	564.0	COG3637@1|root,COG3637@2|Bacteria,1MVJR@1224|Proteobacteria,2TY44@28211|Alphaproteobacteria,3JQM1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
SX1_k127_2241279_3	1297865.APJD01000049_gene5513	9.247e-188	587.0	COG3637@1|root,COG3637@2|Bacteria,1MXGQ@1224|Proteobacteria,2TRQY@28211|Alphaproteobacteria,3JR72@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Outer membrane protein beta-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	OMP_b-brl
SX1_k127_2241279_5	1297865.APJD01000049_gene5512	7.17e-130	415.0	COG0625@1|root,COG0625@2|Bacteria,1REDI@1224|Proteobacteria,2TUGP@28211|Alphaproteobacteria,3JTRR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, C-terminal domain	MA20_05155	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_2,GST_N,GST_N_3
SX1_k127_2241279_7	1297865.APJD01000049_gene5511	7.103e-99	323.0	COG0454@1|root,COG0456@2|Bacteria,1RH0C@1224|Proteobacteria,2U9B4@28211|Alphaproteobacteria,3JY26@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Acetyltransferase (GNAT) domain	phnO	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
SX1_k127_2241279_9	1297865.APJD01000049_gene5510	2.883e-35	136.0	2AAYE@1|root,310BW@2|Bacteria,1N3TF@1224|Proteobacteria,2UE4Q@28211|Alphaproteobacteria,3K0AZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_05145	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2241279_2	1230476.C207_06095	1.033e-256	791.0	COG1932@1|root,COG1932@2|Bacteria,1MUB5@1224|Proteobacteria,2TSHT@28211|Alphaproteobacteria,3JR8V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine	serC	-	2.6.1.52	ko:K00831	ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230	M00020,M00124	R04173,R05085	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_5
SX1_k127_2241279_6	1304878.AUGD01000008_gene6028	7.031e-118	381.0	COG0111@1|root,COG0111@2|Bacteria,1MU5Z@1224|Proteobacteria,2TR0F@28211|Alphaproteobacteria,3JV0H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	D-isomer specific 2-hydroxyacid dehydrogenase	serA	-	1.1.1.399,1.1.1.95	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R01513	RC00031	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh,2-Hacid_dh_C,ACT
SX1_k127_2246326_0	1297865.APJD01000002_gene4160	0.0	1325.0	COG2202@1|root,COG4191@1|root,COG2202@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TQTN@28211|Alphaproteobacteria,3JRHF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Histidine kinase	MA20_35625	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_4,PAS_8
SX1_k127_2246326_3	1220582.RRU01S_37_00260	1.54e-159	514.0	COG4325@1|root,COG4325@2|Bacteria,1MXTM@1224|Proteobacteria,2TRWI@28211|Alphaproteobacteria,4BD3W@82115|Rhizobiaceae	28211|Alphaproteobacteria	S	Predicted membrane protein (DUF2254)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2254
SX1_k127_2246326_13	1297865.APJD01000002_gene4162	2.456e-69	243.0	2A59E@1|root,30W9E@2|Bacteria,1RDCU@1224|Proteobacteria,2U70P@28211|Alphaproteobacteria,3JYP5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	T3SS negative regulator,GrlR	MA20_35630	-	-	-	-	-	-	-	-	-	-	-	GrlR
SX1_k127_2246326_10	1230476.C207_06038	1.217e-85	284.0	2A78J@1|root,30W51@2|Bacteria,1RCYY@1224|Proteobacteria,2U7AT@28211|Alphaproteobacteria,3JYRN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2246326_11	398525.KB900701_gene5567	1.865e-83	284.0	COG0346@1|root,COG0346@2|Bacteria,1RB65@1224|Proteobacteria,2U7DP@28211|Alphaproteobacteria,3JYA1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	MA20_35640	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase,Glyoxalase_4
SX1_k127_2246326_8	172088.AUGA01000021_gene5177	2.167e-96	319.0	2C1CQ@1|root,3007V@2|Bacteria,1R1FC@1224|Proteobacteria,2U0RM@28211|Alphaproteobacteria,3JT3M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2246326_6	1297865.APJD01000002_gene4166	1.525e-104	343.0	2A7IM@1|root,30WGD@2|Bacteria,1RE0E@1224|Proteobacteria,2U7MM@28211|Alphaproteobacteria,3JYQW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2246326_12	1297865.APJD01000002_gene4167	1.263e-79	267.0	2A7JW@1|root,30WHS@2|Bacteria,1RE3G@1224|Proteobacteria,2U57U@28211|Alphaproteobacteria,3JZ1U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2246326_2	1297865.APJD01000002_gene4168	3.014e-184	577.0	COG0190@1|root,COG0190@2|Bacteria,1MWU4@1224|Proteobacteria,2TRZZ@28211|Alphaproteobacteria,3JWHH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate	folD	-	1.5.1.5,3.5.4.9	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	M00140,M00377	R01220,R01655	RC00202,RC00578	ko00000,ko00001,ko00002,ko01000	-	-	-	THF_DHG_CYH,THF_DHG_CYH_C
SX1_k127_2246326_9	1297865.APJD01000002_gene4169	1.818e-92	304.0	COG2030@1|root,COG2030@2|Bacteria,1RC3B@1224|Proteobacteria,2U6SZ@28211|Alphaproteobacteria,3JY30@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	MaoC like domain	-	-	-	-	-	-	-	-	-	-	-	-	MaoC_dehydratas
SX1_k127_2246326_14	1297865.APJD01000002_gene4170	2.024e-62	216.0	COG1695@1|root,COG1695@2|Bacteria,1N0PH@1224|Proteobacteria,2UBD4@28211|Alphaproteobacteria,3JZHS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Transcriptional regulator PadR-like family	-	-	-	ko:K10947	-	-	-	-	ko00000,ko03000	-	-	-	PadR
SX1_k127_2246326_7	1297865.APJD01000002_gene4171	5.404e-104	342.0	COG4709@1|root,COG4709@2|Bacteria,1RAQB@1224|Proteobacteria,2U62C@28211|Alphaproteobacteria,3JZ18@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1700)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1700
SX1_k127_2246326_1	1297865.APJD01000002_gene4172	6.917e-234	728.0	COG1680@1|root,COG1680@2|Bacteria,1NHIY@1224|Proteobacteria,2U0A3@28211|Alphaproteobacteria,3JT7A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SX1_k127_2246326_15	1297865.APJD01000002_gene4173	1.141e-55	199.0	2FDWH@1|root,345WZ@2|Bacteria,1RINP@1224|Proteobacteria,2UD49@28211|Alphaproteobacteria,3JZTN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_23535	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2246326_16	1205680.CAKO01000040_gene818	5.809e-25	115.0	COG2242@1|root,COG2242@2|Bacteria,1QX6B@1224|Proteobacteria,2TZAR@28211|Alphaproteobacteria,2JUEP@204441|Rhodospirillales	204441|Rhodospirillales	H	Methyltransferase FkbM domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_21
SX1_k127_2246326_4	288000.BBta_0640	3.163e-123	400.0	COG3751@1|root,COG3751@2|Bacteria,1RJST@1224|Proteobacteria,2UAC0@28211|Alphaproteobacteria,3K0EZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	2OG-Fe(II) oxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	2OG-FeII_Oxy_3
SX1_k127_2246326_5	288000.BBta_0641	2.746e-114	375.0	2C3U2@1|root,30RRG@2|Bacteria,1RGFH@1224|Proteobacteria,2USYI@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_22611_0	1297865.APJD01000009_gene2875	1.672e-112	366.0	COG0312@1|root,COG0312@2|Bacteria,1MUVW@1224|Proteobacteria,2TSAV@28211|Alphaproteobacteria,3JR0G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative modulator of DNA gyrase	pmbA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564	-	ko:K03592	-	-	-	-	ko00000,ko01002	-	-	-	PmbA_TldD
SX1_k127_22611_1	1230476.C207_03484	1.882e-85	285.0	2E431@1|root,32YZE@2|Bacteria,1N7IT@1224|Proteobacteria,2U6AF@28211|Alphaproteobacteria,3JZ90@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_226232_0	1297865.APJD01000005_gene3976	0.0	1344.0	COG4548@1|root,COG4548@2|Bacteria,1MVBZ@1224|Proteobacteria,2TU4K@28211|Alphaproteobacteria,3JQR3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	von Willebrand factor, type A	-	-	-	-	-	-	-	-	-	-	-	-	VWA,VWA_2
SX1_k127_226232_7	1297865.APJD01000005_gene3975	6.603e-179	565.0	COG0714@1|root,COG0714@2|Bacteria,1MXIW@1224|Proteobacteria,2TTQJ@28211|Alphaproteobacteria,3JVSG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	CbbQ/NirQ/NorQ C-terminal	-	-	-	ko:K04748	-	-	R00294	RC02794	ko00000	3.D.4.10	-	-	AAA_5,CbbQ_C
SX1_k127_226232_5	1297865.APJD01000005_gene3974	4.661e-235	728.0	COG2021@1|root,COG2021@2|Bacteria,1MVJV@1224|Proteobacteria,2TQYA@28211|Alphaproteobacteria,3JR6X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the AB hydrolase superfamily. MetX family	-	-	2.3.1.31	ko:K00641	ko00270,ko01100,ko01130,map00270,map01100,map01130	-	R01776	RC00004,RC00041	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1
SX1_k127_226232_1	1297865.APJD01000005_gene3973	3.004e-279	862.0	COG1457@1|root,COG1457@2|Bacteria,1NS07@1224|Proteobacteria,2U0TM@28211|Alphaproteobacteria,3JWV3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Permease for cytosine/purines, uracil, thiamine, allantoin	-	-	-	ko:K10974	-	-	-	-	ko00000,ko02000	2.A.39.1	-	-	Transp_cyt_pur
SX1_k127_226232_4	1297865.APJD01000005_gene3972	7.436e-238	735.0	COG0388@1|root,COG0388@2|Bacteria,1MY3W@1224|Proteobacteria,2TTKF@28211|Alphaproteobacteria,3JT3W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide	amiE	-	3.5.1.4	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	-	R02540,R03096,R03180,R03909,R05551,R05590	RC00010,RC00100,RC00950,RC01025	ko00000,ko00001,ko01000	-	-	-	CN_hydrolase
SX1_k127_226232_11	690585.JNNU01000013_gene3415	1.581e-76	264.0	COG0410@1|root,COG0410@2|Bacteria,1N01B@1224|Proteobacteria,2U1WJ@28211|Alphaproteobacteria,4BBE0@82115|Rhizobiaceae	28211|Alphaproteobacteria	E	ATPases associated with a variety of cellular activities	-	-	-	ko:K11963	ko02010,map02010	M00323	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4.4,3.A.1.4.5	-	-	ABC_tran
SX1_k127_226232_9	1297865.APJD01000005_gene3970	3.617e-156	501.0	COG4674@1|root,COG4674@2|Bacteria,1MUBR@1224|Proteobacteria,2TSDN@28211|Alphaproteobacteria,3JSQN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Branched-chain amino acid ATP-binding cassette transporter	-	-	-	ko:K11962	ko02010,map02010	M00323	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4.4,3.A.1.4.5	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_226232_6	1230476.C207_01958	8.204e-228	713.0	COG4177@1|root,COG4177@2|Bacteria,1NZDF@1224|Proteobacteria,2VF26@28211|Alphaproteobacteria,3K6DT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	-	-	-	ko:K11961	ko02010,map02010	M00323	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4.4,3.A.1.4.5	-	-	BPD_transp_2
SX1_k127_226232_8	1297865.APJD01000005_gene3968	4.892e-171	541.0	COG0559@1|root,COG0559@2|Bacteria,1N0NE@1224|Proteobacteria,2TU0M@28211|Alphaproteobacteria,3JX4W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	-	-	-	ko:K11960	ko02010,map02010	M00323	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4.4,3.A.1.4.5	-	-	BPD_transp_2
SX1_k127_226232_2	1230476.C207_01956	4.469e-275	849.0	COG0683@1|root,COG0683@2|Bacteria,1MU8V@1224|Proteobacteria,2TS3I@28211|Alphaproteobacteria,3JRX8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K11959	ko02010,map02010	M00323	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4.4,3.A.1.4.5	-	-	Peripla_BP_5,TAT_signal
SX1_k127_226232_10	1297865.APJD01000005_gene3966	1.612e-129	417.0	COG3707@1|root,COG3707@2|Bacteria,1RD4V@1224|Proteobacteria,2TVTM@28211|Alphaproteobacteria,3JVJJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	ANTAR	-	-	-	-	-	-	-	-	-	-	-	-	ANTAR
SX1_k127_226232_3	1297865.APJD01000005_gene3965	2.833e-270	832.0	COG0683@1|root,COG0683@2|Bacteria,1MU8V@1224|Proteobacteria,2TS3I@28211|Alphaproteobacteria,3JS37@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_5
SX1_k127_226232_12	1297865.APJD01000005_gene3964	2.857e-15	74.0	COG1545@1|root,COG1545@2|Bacteria,1REY1@1224|Proteobacteria,2U8AE@28211|Alphaproteobacteria,3JYU2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Rubredoxin-like zinc ribbon domain (DUF35_N)	-	-	-	-	-	-	-	-	-	-	-	-	DUF35_N,OB_aCoA_assoc
SX1_k127_2265275_4	1297865.APJD01000003_gene6429	2.606e-94	310.0	COG4177@1|root,COG4177@2|Bacteria,1MV66@1224|Proteobacteria,2TT26@28211|Alphaproteobacteria,3JRSE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	-	-	-	ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_2265275_0	1297865.APJD01000003_gene6430	2.61e-292	899.0	COG0683@1|root,COG0683@2|Bacteria,1MV5T@1224|Proteobacteria,2TQZC@28211|Alphaproteobacteria,3JV9Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_2265275_3	1297865.APJD01000003_gene6431	5.134e-159	503.0	COG0410@1|root,COG0410@2|Bacteria,1MVVC@1224|Proteobacteria,2TT8N@28211|Alphaproteobacteria,3JWFS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ATPases associated with a variety of cellular activities	-	-	-	ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran
SX1_k127_2265275_1	1297865.APJD01000003_gene6432	1.228e-262	810.0	COG1960@1|root,COG1960@2|Bacteria,1R5A6@1224|Proteobacteria,2U0HW@28211|Alphaproteobacteria,3JVI4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_2265275_5	1297865.APJD01000003_gene6433	3.107e-57	199.0	2A942@1|root,30Y85@2|Bacteria,1RI3Y@1224|Proteobacteria,2U9PZ@28211|Alphaproteobacteria,3K16H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2265275_2	1230476.C207_06553	1.245e-202	633.0	COG2133@1|root,COG2133@2|Bacteria,1MVK5@1224|Proteobacteria,2TRN9@28211|Alphaproteobacteria,3JRG3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Glucose / Sorbosone dehydrogenase	MA20_02000	-	-	-	-	-	-	-	-	-	-	-	GSDH
SX1_k127_2276299_0	1230476.C207_03112	0.0	1554.0	COG1201@1|root,COG1201@2|Bacteria,1MUSW@1224|Proteobacteria,2TR7V@28211|Alphaproteobacteria,3JRG1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DEAD/H associated	lhr	-	-	ko:K03724	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DEAD,DEAD_assoc,Helicase_C
SX1_k127_2276299_7	1297865.APJD01000011_gene6736	1.132e-142	454.0	COG1407@1|root,COG1407@2|Bacteria,1RC5G@1224|Proteobacteria,2TU2T@28211|Alphaproteobacteria,3JTFP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Calcineurin-like phosphoesterase	MA20_22045	-	-	ko:K06953	-	-	-	-	ko00000	-	-	-	Metallophos
SX1_k127_2276299_9	224911.27354970	1.435e-05	52.0	COG2897@1|root,COG2897@2|Bacteria,1MW4B@1224|Proteobacteria,2TR9R@28211|Alphaproteobacteria,3JT1H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rhodanese Homology Domain	sseA	-	2.8.1.1,2.8.1.2	ko:K01011	ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122	-	R01931,R03105,R03106	RC00214	ko00000,ko00001,ko01000	-	-	-	Rhodanese
SX1_k127_2276299_4	1297865.APJD01000011_gene6737	1.675e-179	563.0	COG0583@1|root,COG0583@2|Bacteria,1PR6U@1224|Proteobacteria,2TUC6@28211|Alphaproteobacteria,3JR6A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_2276299_3	1297865.APJD01000011_gene6738	6.962e-185	582.0	COG0697@1|root,COG0697@2|Bacteria,1MXCD@1224|Proteobacteria,2TR27@28211|Alphaproteobacteria,3JRGT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	MA20_19820	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_2276299_8	1297865.APJD01000011_gene6739	2.281e-98	321.0	COG1522@1|root,COG1522@2|Bacteria,1RD8W@1224|Proteobacteria,2U4RV@28211|Alphaproteobacteria,3JXW0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Lrp/AsnC ligand binding domain	-	-	-	-	-	-	-	-	-	-	-	-	AsnC_trans_reg,HTH_24
SX1_k127_2276299_1	1297865.APJD01000011_gene6740	1.408e-280	863.0	COG0160@1|root,COG0160@2|Bacteria,1MWY6@1224|Proteobacteria,2TUDG@28211|Alphaproteobacteria,3JWJF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	gabT	-	2.6.1.19,2.6.1.22,4.1.1.64	ko:K00596,ko:K07250	ko00250,ko00280,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00280,map00410,map00640,map00650,map01100,map01120	M00027	R00908,R01648,R04188	RC00006,RC00062,RC00160	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3
SX1_k127_2276299_5	1297865.APJD01000011_gene6741	5.412e-159	522.0	2AFUA@1|root,315WQ@2|Bacteria,1NHGB@1224|Proteobacteria,2TQWW@28211|Alphaproteobacteria,3JS8S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative transmembrane protein (Alph_Pro_TM)	MA20_19830	-	-	-	-	-	-	-	-	-	-	-	Alph_Pro_TM
SX1_k127_2276299_2	1297865.APJD01000011_gene6742	1.287e-186	585.0	COG0730@1|root,COG0730@2|Bacteria,1MWX2@1224|Proteobacteria,2TRIC@28211|Alphaproteobacteria,3JTKX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	membrane transporter protein	MA20_19835	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
SX1_k127_2276299_6	1230476.C207_03104	8.765e-149	475.0	COG3904@1|root,COG3904@2|Bacteria,1R3Y5@1224|Proteobacteria,2U1FS@28211|Alphaproteobacteria,3JT94@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	periplasmic protein	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2304438_0	1297865.APJD01000033_gene7014	0.0	1332.0	COG0659@1|root,COG0659@2|Bacteria,1MVWV@1224|Proteobacteria,2TVDS@28211|Alphaproteobacteria,3JTMZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Sulfate permease family	-	-	-	ko:K03321	-	-	-	-	ko00000,ko02000	2.A.53.3	-	-	STAS,Sulfate_transp,cNMP_binding
SX1_k127_2304438_1	1297865.APJD01000033_gene7015	1.772e-305	937.0	COG0665@1|root,COG0665@2|Bacteria,1R49W@1224|Proteobacteria,2TUH5@28211|Alphaproteobacteria,3JV6D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	FAD dependent oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	DAO
SX1_k127_2304438_4	398525.KB900701_gene1379	6.512e-129	416.0	COG1802@1|root,COG1802@2|Bacteria,1P2DT@1224|Proteobacteria,2TSI4@28211|Alphaproteobacteria,3K603@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FCD	-	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SX1_k127_2304438_3	1297865.APJD01000033_gene7017	3.602e-186	584.0	COG0834@1|root,COG0834@2|Bacteria,1MV5D@1224|Proteobacteria,2TTE3@28211|Alphaproteobacteria,3JVA1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	ET	Bacterial periplasmic substrate-binding proteins	-	-	-	ko:K10001	ko02010,ko02020,map02010,map02020	M00230	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3.19,3.A.1.3.4	-	-	SBP_bac_3
SX1_k127_2304438_2	1297865.APJD01000033_gene7018	3.85e-233	721.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,3JSVT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde dehydrogenase	gabD	GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0004777,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006105,GO:0006520,GO:0006536,GO:0006538,GO:0006540,GO:0006807,GO:0008150,GO:0008152,GO:0009013,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009448,GO:0009450,GO:0009987,GO:0016054,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0019752,GO:0032787,GO:0036094,GO:0042133,GO:0042135,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606	1.2.1.16,1.2.1.20,1.2.1.79	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	M00027	R00713,R00714,R02401	RC00080	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
SX1_k127_2307168_14	1230476.C207_01755	3.605e-55	195.0	COG0845@1|root,COG0845@2|Bacteria,1MVAS@1224|Proteobacteria,2TTGG@28211|Alphaproteobacteria,3JTB0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	cusB	-	-	ko:K07798	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.6.1.4,8.A.1	-	-	CusF_Ec,HlyD_D23,HlyD_D4
SX1_k127_2307168_12	1297865.APJD01000014_gene782	1.293e-75	256.0	COG0845@1|root,COG0845@2|Bacteria,1RD9V@1224|Proteobacteria,2U7AW@28211|Alphaproteobacteria,3JYZ1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	YtkA-like	-	-	-	-	-	-	-	-	-	-	-	-	YtkA
SX1_k127_2307168_11	1297865.APJD01000014_gene783	1.275e-83	278.0	2A0KD@1|root,30NQK@2|Bacteria,1RGRE@1224|Proteobacteria,2U8FT@28211|Alphaproteobacteria,3JZ70@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2307168_0	1297865.APJD01000014_gene784	0.0	1044.0	COG2939@1|root,COG2939@2|Bacteria,1MW05@1224|Proteobacteria,2TS7R@28211|Alphaproteobacteria,3JSXH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Serine carboxypeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S10
SX1_k127_2307168_4	1297865.APJD01000014_gene785	1.187e-161	509.0	COG0061@1|root,COG0061@2|Bacteria,1MUBC@1224|Proteobacteria,2TSKN@28211|Alphaproteobacteria,3JUS0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP	nadK	-	2.7.1.23	ko:K00858	ko00760,ko01100,map00760,map01100	-	R00104	RC00002,RC00078	ko00000,ko00001,ko01000	-	-	-	NAD_kinase
SX1_k127_2307168_8	398525.KB900701_gene5821	5.068e-118	380.0	COG0784@1|root,COG0784@2|Bacteria,1N0NS@1224|Proteobacteria,2TV2S@28211|Alphaproteobacteria,3JRMA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Response regulator receiver	MA20_31455	-	-	-	-	-	-	-	-	-	-	-	Response_reg
SX1_k127_2307168_7	1297865.APJD01000014_gene787	9.522e-119	382.0	COG2198@1|root,COG2198@2|Bacteria,1NENQ@1224|Proteobacteria,2TSW1@28211|Alphaproteobacteria,3JQP2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Histidine Phosphotransfer domain	MA20_31460	-	-	-	-	-	-	-	-	-	-	-	Hpt
SX1_k127_2307168_1	1297865.APJD01000014_gene788	2.881e-241	747.0	COG5330@1|root,COG5330@2|Bacteria,1MXBZ@1224|Proteobacteria,2TT9C@28211|Alphaproteobacteria,3JR7Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterised protein conserved in bacteria (DUF2336)	MA20_31465	-	-	-	-	-	-	-	-	-	-	-	DUF2336
SX1_k127_2307168_2	1297865.APJD01000014_gene789	1.688e-200	627.0	COG0741@1|root,COG0741@2|Bacteria,1MUMA@1224|Proteobacteria,2TSA5@28211|Alphaproteobacteria,3JQZY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	transglycosylase	-	-	-	-	-	-	-	-	-	-	-	-	SLT
SX1_k127_2307168_10	1297865.APJD01000014_gene790	2.716e-90	300.0	COG0139@1|root,COG0139@2|Bacteria,1MW67@1224|Proteobacteria,2UCKH@28211|Alphaproteobacteria,3JY07@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP	hisI	-	3.5.4.19,3.6.1.31	ko:K01496,ko:K11755	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04035,R04037	RC00002,RC01055	ko00000,ko00001,ko00002,ko01000	-	-	-	PRA-CH,PRA-PH
SX1_k127_2307168_6	1297865.APJD01000014_gene791	2.35e-142	457.0	COG0302@1|root,COG0302@2|Bacteria,1MY3N@1224|Proteobacteria,2TSZI@28211|Alphaproteobacteria,3JSEC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	GTP cyclohydrolase	folE	GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617	3.5.4.16	ko:K01495	ko00790,ko01100,map00790,map01100	M00126,M00841,M00842,M00843	R00428,R04639,R05046,R05048	RC00263,RC00294,RC00323,RC00945,RC01188	ko00000,ko00001,ko00002,ko01000	-	-	-	GTP_cyclohydroI
SX1_k127_2307168_9	1297865.APJD01000014_gene792	1.371e-90	299.0	COG0822@1|root,COG0822@2|Bacteria,1RDGB@1224|Proteobacteria,2U74A@28211|Alphaproteobacteria,3JRJR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NifU-like N terminal domain	nifU	-	-	-	-	-	-	-	-	-	-	-	NifU_N
SX1_k127_2307168_3	1230476.C207_01770	1.248e-170	543.0	COG3904@1|root,COG3904@2|Bacteria,1QG8N@1224|Proteobacteria,2U0GJ@28211|Alphaproteobacteria,3JR2S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	periplasmic protein	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2307168_13	1297865.APJD01000014_gene794	1.327e-66	228.0	COG0759@1|root,COG0759@2|Bacteria,1N6U4@1224|Proteobacteria,2UFKH@28211|Alphaproteobacteria,3JZFD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Could be involved in insertion of integral membrane proteins into the membrane	yidD	-	-	ko:K08998	-	-	-	-	ko00000	-	-	-	Haemolytic
SX1_k127_2307168_15	1297865.APJD01000014_gene795	6.498e-29	120.0	2AEWI@1|root,314U6@2|Bacteria,1NA2W@1224|Proteobacteria,2UGF0@28211|Alphaproteobacteria,3K107@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2307168_5	1297865.APJD01000014_gene796	8.47e-151	477.0	28J0S@1|root,2Z8XX@2|Bacteria,1P9IP@1224|Proteobacteria,2TSZQ@28211|Alphaproteobacteria,3JVZV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2313605_6	1297865.APJD01000011_gene6790	4.124e-153	497.0	COG4239@1|root,COG4239@2|Bacteria,1MUM5@1224|Proteobacteria,2TR1Y@28211|Alphaproteobacteria,3JSKV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	N-terminal TM domain of oligopeptide transport permease C	yejE	GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006857,GO:0008150,GO:0015833,GO:0015893,GO:0016020,GO:0035672,GO:0042221,GO:0042493,GO:0042884,GO:0042886,GO:0042891,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944	-	ko:K13895	ko02010,map02010	M00349	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5.21,3.A.1.5.24	-	-	BPD_transp_1,OppC_N
SX1_k127_2313605_2	1297865.APJD01000011_gene6789	7.812e-235	727.0	COG4174@1|root,COG4174@2|Bacteria,1MVKE@1224|Proteobacteria,2TQJD@28211|Alphaproteobacteria,3JRWI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Binding-protein-dependent transport system inner membrane component	yejB	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006857,GO:0008150,GO:0015833,GO:0015893,GO:0016020,GO:0022857,GO:0035672,GO:0042221,GO:0042493,GO:0042884,GO:0042886,GO:0042891,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944	-	ko:K13894	ko02010,map02010	M00349	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5.21,3.A.1.5.24	-	-	BPD_transp_1
SX1_k127_2313605_1	1297865.APJD01000011_gene6788	0.0	1238.0	COG4166@1|root,COG4166@2|Bacteria,1MUVU@1224|Proteobacteria,2TQJX@28211|Alphaproteobacteria,3JTJ1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Bacterial extracellular solute-binding proteins, family 5 Middle	yejA	-	-	ko:K13893	ko02010,map02010	M00349	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5.21,3.A.1.5.24	-	-	SBP_bac_5
SX1_k127_2313605_0	1297865.APJD01000011_gene6787	0.0	1333.0	COG4166@1|root,COG4166@2|Bacteria,1MUVU@1224|Proteobacteria,2TQJX@28211|Alphaproteobacteria,3JTQZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Bacterial extracellular solute-binding proteins, family 5 Middle	MA20_18500	-	-	ko:K13893	ko02010,map02010	M00349	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5.21,3.A.1.5.24	-	-	SBP_bac_5
SX1_k127_2313605_8	1297865.APJD01000011_gene6786	9.979e-115	370.0	COG3474@1|root,COG3474@2|Bacteria,1RIDN@1224|Proteobacteria,2U142@28211|Alphaproteobacteria,3JQRA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome c	cyc	-	-	ko:K08738	ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	3.D.4.6	-	-	Cytochrom_C
SX1_k127_2313605_7	1297865.APJD01000011_gene6785	5.611e-148	470.0	COG1212@1|root,COG1212@2|Bacteria,1MUUU@1224|Proteobacteria,2TUQM@28211|Alphaproteobacteria,3JUY9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria	kdsB	-	2.7.7.38	ko:K00979	ko00540,ko01100,map00540,map01100	M00063	R03351,R11396	RC00152,RC00910	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	CTP_transf_3
SX1_k127_2313605_5	1297865.APJD01000011_gene6784	2.919e-185	580.0	COG0077@1|root,COG0077@2|Bacteria,1MU60@1224|Proteobacteria,2TSUT@28211|Alphaproteobacteria,3JS53@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Prephenate dehydratase	pheA	-	4.2.1.51	ko:K04518	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00024	R00691,R01373	RC00360	ko00000,ko00001,ko00002,ko01000	-	-	-	PDT
SX1_k127_2313605_3	1297865.APJD01000011_gene6783	2.806e-216	672.0	COG2141@1|root,COG2141@2|Bacteria,1MVF0@1224|Proteobacteria,2TTR7@28211|Alphaproteobacteria,3JV9M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Luciferase-like monooxygenase	MA20_18520	-	-	-	-	-	-	-	-	-	-	-	Bac_luciferase
SX1_k127_2313605_4	1297865.APJD01000011_gene6782	5.341e-200	625.0	COG0685@1|root,COG0685@2|Bacteria,1MUC9@1224|Proteobacteria,2TQZA@28211|Alphaproteobacteria,3JR7B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Methylenetetrahydrofolate reductase	metF	GO:0003674,GO:0003824,GO:0004489,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114	1.5.1.20	ko:K00297	ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523	M00377	R01224,R07168	RC00081	ko00000,ko00001,ko00002,ko01000	-	-	-	MTHFR
SX1_k127_2313605_9	1297865.APJD01000011_gene6781	1.248e-78	263.0	COG0646@1|root,COG1410@1|root,COG0646@2|Bacteria,COG1410@2|Bacteria,1MV6G@1224|Proteobacteria,2TQTG@28211|Alphaproteobacteria,3JUU3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	B12 binding domain	metH	GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0019842,GO:0031419,GO:0032259,GO:0034641,GO:0035999,GO:0036094,GO:0036211,GO:0042084,GO:0042558,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050667,GO:0051186,GO:0071704,GO:0097159,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.1.1.13	ko:K00548	ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230	M00017	R00946,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	B12-binding,B12-binding_2,Met_synt_B12,Pterin_bind,S-methyl_trans
SX1_k127_2321873_0	1297865.APJD01000007_gene2278	0.0	1402.0	COG0439@1|root,COG4799@1|root,COG0439@2|Bacteria,COG4799@2|Bacteria,1MU4H@1224|Proteobacteria,2TWYZ@28211|Alphaproteobacteria,3JUPC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Biotin carboxylase C-terminal domain	MA20_04765	-	-	-	-	-	-	-	-	-	-	-	Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2,Carboxyl_trans
SX1_k127_2321873_1	1297865.APJD01000007_gene2279	4.858e-166	522.0	COG2072@1|root,COG2072@2|Bacteria,1MUQH@1224|Proteobacteria,2TRG4@28211|Alphaproteobacteria,3JWCV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Flavin-binding monooxygenase-like	-	-	1.14.13.160,1.14.13.22	ko:K03379,ko:K21730	ko00930,ko01120,ko01220,map00930,map01120,map01220	-	R02231,R06622	RC00662,RC01550	ko00000,ko00001,ko01000	-	-	-	FMO-like,Pyr_redox_2,Pyr_redox_3
SX1_k127_2331048_2	1297865.APJD01000075_gene2642	8.055e-37	155.0	COG2826@1|root,COG2826@2|Bacteria,1PP49@1224|Proteobacteria,2TRVA@28211|Alphaproteobacteria,3JZ7D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Integrase core domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_38,rve
SX1_k127_2331048_1	1297865.APJD01000076_gene2	1.172e-142	453.0	COG1678@1|root,COG1678@2|Bacteria,1RCXM@1224|Proteobacteria,2TTX4@28211|Alphaproteobacteria,3JV81@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Belongs to the UPF0301 (AlgH) family	MA20_18155	-	-	ko:K07735	-	-	-	-	ko00000,ko03000	-	-	-	DUF179
SX1_k127_2331048_0	1230476.C207_02562	7.89e-170	534.0	COG4233@1|root,COG4233@2|Bacteria,1REVE@1224|Proteobacteria,2VEXK@28211|Alphaproteobacteria,3JTR6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CO	Disulphide bond corrector protein DsbC	-	-	-	-	-	-	-	-	-	-	-	-	DsbC
SX1_k127_2331048_3	1297865.APJD01000075_gene2642	6.344e-17	92.0	COG2826@1|root,COG2826@2|Bacteria,1PP49@1224|Proteobacteria,2TRVA@28211|Alphaproteobacteria,3JZ7D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Integrase core domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_38,rve
SX1_k127_2331111_2	172088.AUGA01000012_gene7140	2.034e-90	298.0	COG2124@1|root,COG2124@2|Bacteria,1MV8Q@1224|Proteobacteria,2TRWW@28211|Alphaproteobacteria,3JU2D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Belongs to the cytochrome P450 family	MA20_04495	-	-	-	-	-	-	-	-	-	-	-	p450
SX1_k127_2331111_3	172088.AUGA01000012_gene7139	4.782e-60	209.0	2BT0E@1|root,32N4G@2|Bacteria,1N1Z0@1224|Proteobacteria,2UEC1@28211|Alphaproteobacteria,3K0DE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2331111_0	1297865.APJD01000023_gene1042	3.956e-250	772.0	COG4269@1|root,COG4269@2|Bacteria,1MW5P@1224|Proteobacteria,2U0EV@28211|Alphaproteobacteria,3JUFQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bacterial protein of unknown function (DUF898)	-	-	-	-	-	-	-	-	-	-	-	-	DUF898
SX1_k127_2331111_1	1297865.APJD01000023_gene1041	3.626e-233	725.0	COG0501@1|root,COG0501@2|Bacteria,1NK9F@1224|Proteobacteria,2TREZ@28211|Alphaproteobacteria,3JTBI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Peptidase family M48	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M48
SX1_k127_235792_7	1297865.APJD01000006_gene4621	2.247e-196	612.0	COG2271@1|root,COG2271@2|Bacteria,1QTW2@1224|Proteobacteria,2U07Z@28211|Alphaproteobacteria,3JR8H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	MA20_02120	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_235792_10	172088.AUGA01000004_gene3893	4.499e-138	441.0	COG0410@1|root,COG0410@2|Bacteria,1QNQ5@1224|Proteobacteria,2TRA5@28211|Alphaproteobacteria,3JX0C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ATPases associated with a variety of cellular activities	-	-	-	ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran
SX1_k127_235792_1	1297865.APJD01000006_gene4619	0.0	1143.0	COG0411@1|root,COG4177@1|root,COG0411@2|Bacteria,COG4177@2|Bacteria,1MUTY@1224|Proteobacteria,2TQVU@28211|Alphaproteobacteria,3JRTU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the binding-protein-dependent transport system permease family	-	-	-	ko:K01995	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C,BPD_transp_2
SX1_k127_235792_8	1297865.APJD01000006_gene4618	4.398e-174	547.0	COG0559@1|root,COG0559@2|Bacteria,1R6XJ@1224|Proteobacteria,2TVKX@28211|Alphaproteobacteria,3JTMV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	-	-	-	-	-	-	-	-	-	-	-	-	BPD_transp_2
SX1_k127_235792_4	1230476.C207_03390	9.821e-257	793.0	COG0683@1|root,COG0683@2|Bacteria,1MX94@1224|Proteobacteria,2TUB9@28211|Alphaproteobacteria,3JVVA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_235792_0	1297865.APJD01000006_gene4616	0.0	1947.0	COG0671@1|root,COG4625@1|root,COG0671@2|Bacteria,COG4625@2|Bacteria,1MU92@1224|Proteobacteria,2TSB7@28211|Alphaproteobacteria,3JUBZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Autotransporter beta-domain	-	-	-	-	-	-	-	-	-	-	-	-	Autotransporter,PATR
SX1_k127_235792_6	1297865.APJD01000006_gene4615	4.235e-198	619.0	COG0111@1|root,COG0111@2|Bacteria,1P7J3@1224|Proteobacteria,2TV9K@28211|Alphaproteobacteria,3JT08@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain	MA20_02105	-	1.1.1.399,1.1.1.95	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R01513	RC00031	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh,2-Hacid_dh_C
SX1_k127_235792_2	1297865.APJD01000006_gene4614	0.0	1139.0	COG1593@1|root,COG3090@1|root,COG1593@2|Bacteria,COG3090@2|Bacteria,1MU0F@1224|Proteobacteria,2TUAJ@28211|Alphaproteobacteria,3JVEW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Tripartite ATP-independent periplasmic transporters, DctQ component	-	-	-	-	-	-	-	-	-	-	-	-	DctM,DctQ
SX1_k127_235792_5	1297865.APJD01000006_gene4613	4.521e-217	678.0	COG1638@1|root,COG1638@2|Bacteria,1MVHC@1224|Proteobacteria,2TSGH@28211|Alphaproteobacteria,3JRA6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Bacterial extracellular solute-binding protein, family 7	-	-	-	-	-	-	-	-	-	-	-	-	DctP
SX1_k127_235792_9	1297865.APJD01000006_gene4612	2.49e-154	489.0	COG2186@1|root,COG2186@2|Bacteria,1MV83@1224|Proteobacteria,2UDPS@28211|Alphaproteobacteria,3JWGY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FCD	-	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SX1_k127_235792_3	1297865.APJD01000006_gene4611	6.14e-307	942.0	COG2114@1|root,COG2114@2|Bacteria,1RBTC@1224|Proteobacteria,2TV5V@28211|Alphaproteobacteria,3JQSU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc,dCache_1
SX1_k127_2361837_0	1297865.APJD01000019_gene3214	6.347e-291	893.0	COG0137@1|root,COG0137@2|Bacteria,1MV0Y@1224|Proteobacteria,2TTGS@28211|Alphaproteobacteria,3JRAJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the argininosuccinate synthase family. Type 2 subfamily	argG	GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	6.3.4.5	ko:K01940	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418	M00029,M00844,M00845	R01954	RC00380,RC00629	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Arginosuc_synth
SX1_k127_2361837_1	1297865.APJD01000019_gene3215	2.34e-116	375.0	COG1309@1|root,COG1309@2|Bacteria,1R5GP@1224|Proteobacteria,2TVDR@28211|Alphaproteobacteria,3JUHQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_2361837_3	1297865.APJD01000019_gene3216	9.904e-71	250.0	COG3631@1|root,COG3631@2|Bacteria,1RDDF@1224|Proteobacteria,2U73P@28211|Alphaproteobacteria,3JYYD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_2
SX1_k127_2361837_4	398525.KB900701_gene1701	1.891e-14	85.0	COG1785@1|root,COG1785@2|Bacteria,1MXI2@1224|Proteobacteria,2TTUZ@28211|Alphaproteobacteria,3JV60@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Alkaline phosphatase homologues	phoA	-	3.1.3.1	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	M00126	R02135,R04620	RC00017	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	-	-	-	Alk_phosphatase
SX1_k127_2361837_2	1297865.APJD01000019_gene3217	5.935e-77	261.0	COG1785@1|root,COG1785@2|Bacteria,1MXI2@1224|Proteobacteria,2TTUZ@28211|Alphaproteobacteria,3JV60@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Alkaline phosphatase homologues	phoA	-	3.1.3.1	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	M00126	R02135,R04620	RC00017	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	-	-	-	Alk_phosphatase
SX1_k127_2362352_3	1297865.APJD01000005_gene3890	9.922e-13	68.0	COG0583@1|root,COG0583@2|Bacteria,1MWVU@1224|Proteobacteria,2TQS4@28211|Alphaproteobacteria,3JUJ9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR substrate binding domain	MA20_07165	-	-	ko:K21703	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
SX1_k127_2362352_0	1297865.APJD01000005_gene3891	3.817e-212	661.0	COG0158@1|root,COG0158@2|Bacteria,1MW0E@1224|Proteobacteria,2TSKS@28211|Alphaproteobacteria,3JR9F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1	fbp	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0071704,GO:1901135,GO:1901576	3.1.3.11	ko:K03841	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko04152,ko04910,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map04152,map04910	M00003,M00165,M00167,M00344	R00762,R04780	RC00017	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	FBPase
SX1_k127_2362352_1	398525.KB900701_gene3928	3.459e-185	598.0	COG3954@1|root,COG3954@2|Bacteria,1MWN9@1224|Proteobacteria,2TSV4@28211|Alphaproteobacteria,3JQSP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Phosphoribulokinase / Uridine kinase family	cbbP	-	2.7.1.19	ko:K00855	ko00710,ko01100,ko01120,ko01200,map00710,map01100,map01120,map01200	M00165,M00166	R01523	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	PRK
SX1_k127_2362352_2	1297865.APJD01000005_gene3893	4.03e-170	537.0	COG0021@1|root,COG0021@2|Bacteria,1MUEY@1224|Proteobacteria,2TQUX@28211|Alphaproteobacteria,3JSRY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate	cbbT	-	2.2.1.1	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01067,R01641,R01830,R06590	RC00032,RC00226,RC00571,RC01560	ko00000,ko00001,ko00002,ko01000	-	-	-	Transket_pyr,Transketolase_C,Transketolase_N
SX1_k127_2365972_7	1297865.APJD01000010_gene5035	7.358e-74	249.0	COG0787@1|root,COG0787@2|Bacteria,1MV0Q@1224|Proteobacteria,2TQKD@28211|Alphaproteobacteria,3JT0R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids	alr	-	5.1.1.1	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502	-	R00401	RC00285	ko00000,ko00001,ko01000,ko01011	-	-	-	Ala_racemase_C,Ala_racemase_N
SX1_k127_2365972_3	1297865.APJD01000010_gene5034	2.273e-172	544.0	COG0708@1|root,COG0708@2|Bacteria,1MVII@1224|Proteobacteria,2TR5J@28211|Alphaproteobacteria,3JW4S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Endonuclease/Exonuclease/phosphatase family	xth	-	3.1.11.2	ko:K01142	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exo_endo_phos
SX1_k127_2365972_2	1297865.APJD01000010_gene5033	2.918e-178	558.0	COG3637@1|root,COG3637@2|Bacteria,1MWEG@1224|Proteobacteria,2TSCB@28211|Alphaproteobacteria,3JTF0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K16079	-	-	-	-	ko00000,ko02000	1.B.4.2.1	-	-	OMP_b-brl
SX1_k127_2365972_4	1297865.APJD01000010_gene5032	1.449e-148	472.0	COG0730@1|root,COG0730@2|Bacteria,1MVYH@1224|Proteobacteria,2TTY0@28211|Alphaproteobacteria,3JS7X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sulfite exporter TauE/SafE	MA20_27970	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
SX1_k127_2365972_6	1297865.APJD01000010_gene5031	7.326e-102	332.0	2DNE6@1|root,32X2K@2|Bacteria,1MYAI@1224|Proteobacteria,2UDH9@28211|Alphaproteobacteria,3K0SY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2365972_0	1297865.APJD01000010_gene5030	6.044e-313	960.0	COG1066@1|root,COG1066@2|Bacteria,1MUJQ@1224|Proteobacteria,2TS6F@28211|Alphaproteobacteria,3JR45@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function	radA	-	-	ko:K04485	-	-	-	-	ko00000,ko03400	-	-	-	AAA_25,ATPase,ChlI
SX1_k127_2365972_5	398525.KB900701_gene4500	9.9e-124	398.0	COG1286@1|root,COG1286@2|Bacteria,1NF4G@1224|Proteobacteria,2TUVR@28211|Alphaproteobacteria,3JQX3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Colicin V production protein	cvpA	-	-	ko:K03558	-	-	-	-	ko00000	-	-	-	Colicin_V
SX1_k127_2365972_1	1297865.APJD01000010_gene5028	2.547e-235	728.0	COG0034@1|root,COG0034@2|Bacteria,1MU0V@1224|Proteobacteria,2TR8V@28211|Alphaproteobacteria,3JUSU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine	purF	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464	2.4.2.14	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	M00048	R01072	RC00010,RC02724,RC02752	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	GATase_6,GATase_7,Pribosyltran
SX1_k127_237429_6	1297865.APJD01000001_gene5832	7.06e-21	91.0	COG2951@1|root,COG2951@2|Bacteria,1MVY0@1224|Proteobacteria,2TTVI@28211|Alphaproteobacteria,3JSD1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Transglycosylase SLT domain	MA20_41385	-	-	-	-	-	-	-	-	-	-	-	SLT_2
SX1_k127_237429_3	1297865.APJD01000001_gene5833	6.657e-52	185.0	2AERP@1|root,314NE@2|Bacteria,1NAY6@1224|Proteobacteria,2UFAT@28211|Alphaproteobacteria,3K18C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_237429_5	1298867.AUES01000007_gene5052	1.112e-25	106.0	COG5457@1|root,COG5457@2|Bacteria,1N809@1224|Proteobacteria,2UF7P@28211|Alphaproteobacteria,3K150@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF1127)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1127
SX1_k127_237429_0	1297865.APJD01000001_gene5835	2.86e-308	945.0	COG1206@1|root,COG1206@2|Bacteria,1MWNQ@1224|Proteobacteria,2TR6M@28211|Alphaproteobacteria,3JSPG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs	trmFO	GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363	2.1.1.74	ko:K04094	-	-	-	-	ko00000,ko01000,ko03016,ko03036	-	-	-	GIDA
SX1_k127_237429_1	1297865.APJD01000001_gene5836	5.696e-234	733.0	COG0318@1|root,COG2112@1|root,COG0318@2|Bacteria,COG2112@2|Bacteria,1R4X2@1224|Proteobacteria,2TQVY@28211|Alphaproteobacteria,3JU2U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQT	serine threonine protein kinase	MA20_41400	-	-	-	-	-	-	-	-	-	-	-	AMP-binding_C
SX1_k127_237429_4	1297865.APJD01000001_gene5837	8.542e-51	183.0	2AA05@1|root,30Z8N@2|Bacteria,1RKAI@1224|Proteobacteria,2U9U6@28211|Alphaproteobacteria,3JZS2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1488)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1488
SX1_k127_237429_2	1297865.APJD01000001_gene5838	1.934e-158	499.0	COG1562@1|root,COG1562@2|Bacteria,1MX4W@1224|Proteobacteria,2U08T@28211|Alphaproteobacteria,3JR6N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Squalene/phytoene synthase	crtB	-	2.5.1.32,2.5.1.99	ko:K02291,ko:K18163	ko00906,ko01062,ko01100,ko01110,ko04714,map00906,map01062,map01100,map01110,map04714	M00097	R02065,R04218,R07270,R10177	RC00362,RC01101,RC02869	ko00000,ko00001,ko00002,ko01000,ko01006,ko03029	-	-	-	SQS_PSY
SX1_k127_2378507_2	1297865.APJD01000003_gene6302	3.288e-84	278.0	COG1807@1|root,COG1807@2|Bacteria,1QA8B@1224|Proteobacteria,2TS1J@28211|Alphaproteobacteria,3JT1S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Dolichyl-phosphate-mannose-protein mannosyltransferase	MA20_19960	-	-	-	-	-	-	-	-	-	-	-	PMT_2
SX1_k127_2378507_4	1297865.APJD01000003_gene6303	6.99e-58	206.0	COG1925@1|root,COG1925@2|Bacteria,1N6RM@1224|Proteobacteria,2UC0H@28211|Alphaproteobacteria,3JZF9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	system phosphocarrier protein HPr	ptsH	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006808,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0044424,GO:0044464,GO:0050789,GO:0051179,GO:0051234,GO:0065007,GO:0071702	-	ko:K11189	-	-	-	-	ko00000,ko02000	4.A.2.1	-	-	PTS-HPr
SX1_k127_2378507_1	1038859.AXAU01000026_gene2299	7.199e-89	294.0	COG2893@1|root,COG2893@2|Bacteria,1RHH7@1224|Proteobacteria,2U9E5@28211|Alphaproteobacteria,3JY47@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	PTS system fructose IIA component	manX	-	2.7.1.191	ko:K02793	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	M00276	R02630	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.6.1	-	-	EIIA-man
SX1_k127_2378507_3	1230476.C207_02823	3.198e-79	269.0	COG1493@1|root,COG1493@2|Bacteria,1NNN5@1224|Proteobacteria,2UFPB@28211|Alphaproteobacteria,3JZX2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	HPr Serine kinase C-terminal domain	hprK	-	-	ko:K06023	-	-	-	-	ko00000,ko01000	-	-	-	Hpr_kinase_C
SX1_k127_2378507_0	1297865.APJD01000003_gene6306	0.0	1176.0	COG0642@1|root,COG2205@2|Bacteria,1N17V@1224|Proteobacteria,2TS69@28211|Alphaproteobacteria,3JS5W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Histidine kinase	chvG	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	2.7.13.3	ko:K14980	ko02020,map02020	M00520	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HAMP,HATPase_c,HisKA,Sensor_TM1,Stimulus_sens_1
SX1_k127_2378507_5	1298867.AUES01000060_gene4717	6.058e-25	103.0	COG0745@1|root,COG0745@2|Bacteria,1MVCB@1224|Proteobacteria,2TR43@28211|Alphaproteobacteria,3JR30@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Two component transcriptional regulator, winged helix family	chvI	GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141	-	ko:K14981	ko02020,map02020	M00520	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
SX1_k127_2381055_0	1297865.APJD01000033_gene7048	1.023e-257	795.0	COG1185@1|root,COG1185@2|Bacteria,1MVB9@1224|Proteobacteria,2TRH3@28211|Alphaproteobacteria,3JR39@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction	pnp	GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575	2.7.7.8	ko:K00962	ko00230,ko00240,ko03018,map00230,map00240,map03018	M00394	R00437,R00438,R00439,R00440	RC02795	ko00000,ko00001,ko00002,ko01000,ko03016,ko03019	-	-	-	KH_1,PNPase,RNase_PH,RNase_PH_C,S1
SX1_k127_2381055_4	1297865.APJD01000033_gene7049	2.638e-154	488.0	COG0605@1|root,COG0605@2|Bacteria,1MVW2@1224|Proteobacteria,2TQYJ@28211|Alphaproteobacteria,3JTU9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Destroys radicals which are normally produced within the cells and which are toxic to biological systems	sodA	-	1.15.1.1	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	-	-	-	ko00000,ko00001,ko01000	-	-	-	Sod_Fe_C,Sod_Fe_N
SX1_k127_2381055_8	1297865.APJD01000033_gene7050	2.199e-103	338.0	COG0454@1|root,COG0456@2|Bacteria,1RAFA@1224|Proteobacteria,2U1HD@28211|Alphaproteobacteria,3JR40@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10
SX1_k127_2381055_6	1297865.APJD01000033_gene7051	4.126e-123	404.0	COG0625@1|root,COG0625@2|Bacteria,1RA05@1224|Proteobacteria,2TS58@28211|Alphaproteobacteria,3JT29@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, N-terminal domain	MA20_23980	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_2,GST_N,GST_N_3
SX1_k127_2381055_11	224911.27348412	1.01e-07	59.0	2978Y@1|root,2ZUGP@2|Bacteria,1RD02@1224|Proteobacteria,2U7VP@28211|Alphaproteobacteria,3JZ2X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2381055_1	1230476.C207_02308	2.363e-248	772.0	COG3007@1|root,COG3007@2|Bacteria,1MWCQ@1224|Proteobacteria,2U1IY@28211|Alphaproteobacteria,3JX0R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP)	fabV	-	-	-	-	-	-	-	-	-	-	-	Eno-Rase_FAD_bd,Eno-Rase_NADH_b,Enoyl_reductase
SX1_k127_2381055_3	1297865.APJD01000033_gene7053	7.448e-168	527.0	COG0304@1|root,COG0304@2|Bacteria,1MU1X@1224|Proteobacteria,2TQYV@28211|Alphaproteobacteria,3JS31@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Belongs to the beta-ketoacyl-ACP synthases family	fabB	GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576	2.3.1.41	ko:K00647	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Ketoacyl-synt_C,ketoacyl-synt
SX1_k127_2381055_10	1230476.C207_02307	6.149e-88	291.0	COG0304@1|root,COG0304@2|Bacteria,1MU1X@1224|Proteobacteria,2TQYV@28211|Alphaproteobacteria,3JS31@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Belongs to the beta-ketoacyl-ACP synthases family	fabB	GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576	2.3.1.41	ko:K00647	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Ketoacyl-synt_C,ketoacyl-synt
SX1_k127_2381055_7	1297865.APJD01000033_gene7054	8.901e-115	369.0	COG0764@1|root,COG0764@2|Bacteria,1MWV8@1224|Proteobacteria,2TV8S@28211|Alphaproteobacteria,3JRCK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length	fabA	-	4.2.1.59,5.3.3.14	ko:K01716	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00083	R04428,R04535,R04537,R04544,R04568,R04954,R04965,R07639	RC00831,RC01078,RC01095	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	FabA
SX1_k127_2381055_9	1230476.C207_02305	2.763e-101	332.0	COG0735@1|root,COG0735@2|Bacteria,1RH58@1224|Proteobacteria,2U75R@28211|Alphaproteobacteria,3JUEN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the Fur family	irr	-	-	ko:K09826	-	-	-	-	ko00000,ko03000	-	-	-	FUR
SX1_k127_2381055_5	1297865.APJD01000033_gene7056	1.479e-124	402.0	COG3807@1|root,COG3807@2|Bacteria,1RHM2@1224|Proteobacteria,2UA1R@28211|Alphaproteobacteria,3JT0T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bacterial SH3 domain	MA20_24010	-	6.1.1.12	ko:K01876	ko00970,map00970	M00359,M00360	R05577	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	SH3_4
SX1_k127_2381055_2	1297865.APJD01000033_gene7057	3.304e-216	671.0	COG1052@1|root,COG1052@2|Bacteria,1MU2D@1224|Proteobacteria,2TSM8@28211|Alphaproteobacteria,3JQKZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	D-isomer specific 2-hydroxyacid dehydrogenase	gyaR	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	1.1.1.26	ko:K00015	ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120	-	R00717,R01388	RC00031,RC00042	ko00000,ko00001,ko01000	-	-	-	2-Hacid_dh,2-Hacid_dh_C
SX1_k127_2381055_12	1230476.C207_06807	8.019e-07	51.0	COG2826@1|root,COG2826@2|Bacteria,1PP49@1224|Proteobacteria,2TRVA@28211|Alphaproteobacteria,3JZ7D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Integrase core domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_38,rve
SX1_k127_2381099_1	1297865.APJD01000025_gene4015	3.412e-270	832.0	COG0606@1|root,COG0606@2|Bacteria,1MU4R@1224|Proteobacteria,2TQU6@28211|Alphaproteobacteria,3JVC0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Magnesium chelatase, subunit ChlI C-terminal	comM	-	-	ko:K07391	-	-	-	-	ko00000	-	-	-	ChlI,Mg_chelatase,Mg_chelatase_C
SX1_k127_2381099_2	1297865.APJD01000025_gene4016	5.019e-100	327.0	2A6SJ@1|root,30VKT@2|Bacteria,1RAEW@1224|Proteobacteria,2U654@28211|Alphaproteobacteria,3JYG8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2381099_0	1297865.APJD01000025_gene4017	0.0	1461.0	COG0642@1|root,COG0784@1|root,COG0784@2|Bacteria,COG2205@2|Bacteria,1NRP8@1224|Proteobacteria,2TWPZ@28211|Alphaproteobacteria,3JTJD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS,PAS_4,PAS_8,Response_reg
SX1_k127_2381099_3	1230476.C207_06807	8.019e-07	51.0	COG2826@1|root,COG2826@2|Bacteria,1PP49@1224|Proteobacteria,2TRVA@28211|Alphaproteobacteria,3JZ7D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Integrase core domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_38,rve
SX1_k127_2383046_6	1297865.APJD01000019_gene3185	3.848e-91	299.0	COG2124@1|root,COG2124@2|Bacteria,1MV75@1224|Proteobacteria,2TSV7@28211|Alphaproteobacteria,3JQV5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Cytochrome P450	MA20_25190	-	1.14.14.1	ko:K00493	ko00071,ko00380,ko00627,ko01120,map00071,map00380,map00627,map01120	-	R03629,R04121,R05259	RC00046,RC01311	ko00000,ko00001,ko01000	-	-	-	p450
SX1_k127_2383046_0	1297865.APJD01000019_gene3186	5.592e-309	947.0	COG2114@1|root,COG2114@2|Bacteria,1NAJG@1224|Proteobacteria,2TSVT@28211|Alphaproteobacteria,3JS1G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylyl- / guanylyl cyclase, catalytic domain	cyaH	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc
SX1_k127_2383046_5	1297865.APJD01000019_gene3187	2.84e-103	337.0	COG4103@1|root,COG4103@2|Bacteria,1N6YZ@1224|Proteobacteria,2U93G@28211|Alphaproteobacteria,3JUGW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tellurite resistance protein TerB	-	-	-	-	-	-	-	-	-	-	-	-	TerB
SX1_k127_2383046_4	1297865.APJD01000019_gene3188	1.128e-159	504.0	COG0300@1|root,COG0300@2|Bacteria,1RG9T@1224|Proteobacteria,2TW0V@28211|Alphaproteobacteria,3JS8Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	MA20_25205	-	-	ko:K07124	-	-	-	-	ko00000	-	-	-	adh_short
SX1_k127_2383046_2	1297865.APJD01000019_gene3189	7.65e-180	565.0	COG0518@1|root,COG0518@2|Bacteria,1MUDH@1224|Proteobacteria,2TU60@28211|Alphaproteobacteria,3JRGP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Glutamine amidotransferase class-I	guaA2	-	6.3.5.2	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	M00050	R01230,R01231,R08244	RC00010,RC00204	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	GATase
SX1_k127_2383046_3	1297865.APJD01000019_gene3190	1.358e-173	549.0	COG1024@1|root,COG1024@2|Bacteria,1MXZ2@1224|Proteobacteria,2TRQ8@28211|Alphaproteobacteria,3JVYF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	enoyl-CoA hydratase	MA20_25215	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_2383046_8	1297865.APJD01000019_gene3192	9.286e-51	181.0	COG0762@1|root,COG0762@2|Bacteria,1N73Q@1224|Proteobacteria,2UFZR@28211|Alphaproteobacteria,3JZGE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	YGGT family	MA20_25225	-	-	ko:K02221	-	-	-	-	ko00000,ko02044	-	-	-	YGGT
SX1_k127_2383046_7	1297865.APJD01000019_gene3193	2.359e-62	215.0	COG1872@1|root,COG1872@2|Bacteria,1N6V2@1224|Proteobacteria,2UF67@28211|Alphaproteobacteria,3JZCX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the UPF0235 family	MA20_25230	-	-	ko:K09131	-	-	-	-	ko00000	-	-	-	DUF167
SX1_k127_2383046_1	1297865.APJD01000019_gene3194	2.919e-185	580.0	COG0190@1|root,COG0190@2|Bacteria,1MWU4@1224|Proteobacteria,2TRZZ@28211|Alphaproteobacteria,3JQPP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate	folD	GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114	1.5.1.5,3.5.4.9	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	M00140,M00377	R01220,R01655	RC00202,RC00578	ko00000,ko00001,ko00002,ko01000	-	-	-	THF_DHG_CYH,THF_DHG_CYH_C
SX1_k127_2387902_3	1297865.APJD01000018_gene5717	8.686e-183	572.0	COG1053@1|root,COG1053@2|Bacteria,1NZBR@1224|Proteobacteria,2TSN4@28211|Alphaproteobacteria,3JS97@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	asfA	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_2,Succ_DH_flav_C
SX1_k127_2387902_8	1297865.APJD01000018_gene5718	2.247e-68	234.0	COG1146@1|root,COG1146@2|Bacteria,1MYM5@1224|Proteobacteria,2U9IN@28211|Alphaproteobacteria,3JZDK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	4Fe-4S dicluster domain	-	-	-	-	-	-	-	-	-	-	-	-	Fer4
SX1_k127_2387902_2	1297865.APJD01000018_gene5719	7.684e-229	718.0	COG1135@1|root,COG1135@2|Bacteria,1QTTK@1224|Proteobacteria,2TQSF@28211|Alphaproteobacteria,3JWDF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system	metN	-	-	ko:K02071	ko02010,map02010	M00238	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.24	-	-	ABC_tran,NIL
SX1_k127_2387902_7	1101191.KI912577_gene3721	1.822e-92	309.0	COG2011@1|root,COG2011@2|Bacteria,1MW8E@1224|Proteobacteria,2TU01@28211|Alphaproteobacteria,1JTXK@119045|Methylobacteriaceae	28211|Alphaproteobacteria	P	PFAM binding-protein-dependent transport systems inner membrane component	metI	-	-	ko:K02072	ko02010,map02010	M00238	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.24	-	-	BPD_transp_1
SX1_k127_2387902_4	1297865.APJD01000018_gene5721	7.111e-171	537.0	COG1464@1|root,COG1464@2|Bacteria,1MUVY@1224|Proteobacteria,2TRCJ@28211|Alphaproteobacteria,3JT9P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NLPA lipoprotein	metQ	-	-	ko:K02073	ko02010,map02010	M00238	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.24	-	-	Lipoprotein_9
SX1_k127_2387902_6	1297865.APJD01000018_gene5722	1.175e-159	505.0	COG1464@1|root,COG1464@2|Bacteria,1MUVY@1224|Proteobacteria,2TRCJ@28211|Alphaproteobacteria,3JT9P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NLPA lipoprotein	-	-	-	ko:K02073	ko02010,map02010	M00238	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.24	-	-	Lipoprotein_9
SX1_k127_2387902_0	1297865.APJD01000018_gene5723	9.479e-305	935.0	COG2141@1|root,COG2141@2|Bacteria,1MUJ9@1224|Proteobacteria,2TQKS@28211|Alphaproteobacteria,3JTJX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Luciferase-like monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	Bac_luciferase
SX1_k127_2387902_1	1297865.APJD01000018_gene5724	1.195e-286	882.0	COG2873@1|root,COG2873@2|Bacteria,1NQME@1224|Proteobacteria,2TQW9@28211|Alphaproteobacteria,3JSIR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Cys/Met metabolism PLP-dependent enzyme	-	-	2.5.1.49	ko:K01740	ko00270,ko01100,map00270,map01100	-	R01287,R04859	RC00020,RC02821,RC02848	ko00000,ko00001,ko01000	-	-	-	Cys_Met_Meta_PP
SX1_k127_2387902_5	1297865.APJD01000018_gene5725	1.3e-164	519.0	COG1464@1|root,COG1464@2|Bacteria,1R70W@1224|Proteobacteria,2U3XE@28211|Alphaproteobacteria,3JW7M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NLPA lipoprotein	-	-	-	-	-	-	-	-	-	-	-	-	Lipoprotein_9
SX1_k127_2389263_2	1297865.APJD01000026_gene2600	9.071e-211	656.0	COG0320@1|root,COG0320@2|Bacteria,1MVRD@1224|Proteobacteria,2TRP3@28211|Alphaproteobacteria,3JQSF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives	lipA	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576	2.8.1.8	ko:K03644	ko00785,ko01100,map00785,map01100	-	R07767,R07768	RC01978	ko00000,ko00001,ko01000	-	-	-	LIAS_N,Radical_SAM
SX1_k127_2389263_4	1297865.APJD01000026_gene2601	1.958e-131	421.0	COG2094@1|root,COG2094@2|Bacteria,1RE0A@1224|Proteobacteria,2U7N6@28211|Alphaproteobacteria,3JRMQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Belongs to the DNA glycosylase MPG family	-	GO:0003674,GO:0003824,GO:0003905,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360	3.2.2.21	ko:K03652	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Pur_DNA_glyco
SX1_k127_2389263_0	1297865.APJD01000026_gene2602	0.0	1971.0	COG0525@1|root,COG0525@2|Bacteria,1MV7B@1224|Proteobacteria,2TS9E@28211|Alphaproteobacteria,3JTU7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner	valS	GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.9	ko:K01873	ko00970,map00970	M00359,M00360	R03665	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,Val_tRNA-synt_C,tRNA-synt_1
SX1_k127_2389263_3	1297865.APJD01000026_gene2603	2.001e-135	434.0	COG3827@1|root,COG3827@2|Bacteria,1MX61@1224|Proteobacteria,2TSG8@28211|Alphaproteobacteria,3JS94@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2497)	-	-	-	ko:K09991	-	-	-	-	ko00000	-	-	-	DUF2497
SX1_k127_2389263_1	1297865.APJD01000026_gene2604	6.459e-271	837.0	COG1538@1|root,COG1538@2|Bacteria,1MWCJ@1224|Proteobacteria,2TR3S@28211|Alphaproteobacteria,3JSNE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	MU	outer membrane protein, TolC	tolC	-	-	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	1.B.17,2.A.6.2	-	-	OEP
SX1_k127_2389263_5	1297865.APJD01000026_gene2605	2.337e-92	304.0	COG2518@1|root,COG2518@2|Bacteria,1RD6S@1224|Proteobacteria,2U704@28211|Alphaproteobacteria,3JSMP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)	pcm2	-	2.1.1.77	ko:K00573	-	-	-	-	ko00000,ko01000	-	-	-	PCMT
SX1_k127_2394651_6	1297865.APJD01000007_gene2017	5.524e-62	213.0	COG0454@1|root,COG0456@2|Bacteria,1RA6D@1224|Proteobacteria,2UC27@28211|Alphaproteobacteria,3JYBK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
SX1_k127_2394651_2	1297865.APJD01000007_gene2016	6.028e-118	379.0	COG0494@1|root,COG0494@2|Bacteria,1MWBQ@1224|Proteobacteria,2TVWJ@28211|Alphaproteobacteria,3JSVC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	NTP pyrophosphohydrolases including oxidative damage repair enzymes	MA20_42045	-	-	-	-	-	-	-	-	-	-	-	NUDIX
SX1_k127_2394651_5	1297865.APJD01000007_gene2015	9.069e-82	274.0	2E560@1|root,32ZYT@2|Bacteria,1RAE3@1224|Proteobacteria,2U5G6@28211|Alphaproteobacteria,3JY3P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_01460	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2394651_8	1297865.APJD01000007_gene2014	8.204e-48	177.0	2A9AW@1|root,2ZZX8@2|Bacteria,1N20W@1224|Proteobacteria,2UCGM@28211|Alphaproteobacteria,3K07T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2394651_3	1297865.APJD01000007_gene2013	1.489e-95	316.0	COG2214@1|root,COG2214@2|Bacteria,1QSTG@1224|Proteobacteria,2U39M@28211|Alphaproteobacteria,3JV3X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	DnaJ molecular chaperone homology domain	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2394651_1	1297865.APJD01000007_gene2012	1.026e-158	503.0	COG1028@1|root,COG1028@2|Bacteria,1N907@1224|Proteobacteria,2TTPW@28211|Alphaproteobacteria,3JQZX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	MA20_01425	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_2394651_10	1230476.C207_00408	6.654e-45	165.0	COG2204@1|root,COG2204@2|Bacteria,1NCIM@1224|Proteobacteria,2UF9Z@28211|Alphaproteobacteria,3K03X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Bacterial regulatory protein, Fis family	MA20_01420	-	-	-	-	-	-	-	-	-	-	-	HTH_8
SX1_k127_2394651_13	1126627.BAWE01000004_gene3163	0.000171	44.0	COG0587@1|root,COG0587@2|Bacteria,1MUE4@1224|Proteobacteria,2TRUB@28211|Alphaproteobacteria,3JUU5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase	dnaE2	GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496	2.7.7.7	ko:K02337,ko:K14162	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_alpha,HHH_6,PHP,tRNA_anti-codon
SX1_k127_2394651_0	1297865.APJD01000007_gene2010	2.683e-210	657.0	2BS0Z@1|root,32M1I@2|Bacteria,1R5YE@1224|Proteobacteria,2U3WF@28211|Alphaproteobacteria,3JWIW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2394651_4	398525.KB900701_gene7214	7.412e-94	310.0	COG3468@1|root,COG3468@2|Bacteria,1QW78@1224|Proteobacteria,2U7B9@28211|Alphaproteobacteria,3JYMQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	MU	Collagen triple helix repeat (20 copies)	-	-	-	-	-	-	-	-	-	-	-	-	Collagen
SX1_k127_2394651_9	1297865.APJD01000007_gene2008	1.3e-45	166.0	2CAD8@1|root,2ZZE5@2|Bacteria,1N02Q@1224|Proteobacteria,2UCCB@28211|Alphaproteobacteria,3K08E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2394651_7	172088.AUGA01000059_gene4260	2.94e-51	183.0	COG5552@1|root,COG5552@2|Bacteria,1MZBV@1224|Proteobacteria,2UC5C@28211|Alphaproteobacteria,3JZF4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized conserved protein (DUF2277)	MA20_01405	-	-	-	-	-	-	-	-	-	-	-	DUF2277
SX1_k127_2394651_11	1297865.APJD01000007_gene2006	3.515e-44	169.0	2EA3Y@1|root,3348X@2|Bacteria,1N7DC@1224|Proteobacteria,2UF9X@28211|Alphaproteobacteria,3K0PP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized protein conserved in bacteria (DUF2188)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2188
SX1_k127_2394651_12	398525.KB900701_gene7218	5.881e-18	83.0	COG0640@1|root,COG0640@2|Bacteria,1PRJW@1224|Proteobacteria,2TWA5@28211|Alphaproteobacteria,3JXNA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20
SX1_k127_2396671_6	1297865.APJD01000033_gene6984	2.575e-60	208.0	COG2080@1|root,COG2080@2|Bacteria,1RD8C@1224|Proteobacteria,2U6Z6@28211|Alphaproteobacteria,3JR0E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	1.3.99.16	ko:K00256,ko:K07302	-	-	-	-	ko00000,ko01000	-	-	-	Fer2,Fer2_2
SX1_k127_2396671_0	1297865.APJD01000033_gene6983	0.0	1496.0	COG1529@1|root,COG1529@2|Bacteria,1QTTJ@1224|Proteobacteria,2TQVK@28211|Alphaproteobacteria,3JUKM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	1.3.99.16	ko:K00256	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2
SX1_k127_2396671_5	1297865.APJD01000033_gene6982	2.28e-116	378.0	2FFF5@1|root,347CP@2|Bacteria,1NC5S@1224|Proteobacteria,2UPKY@28211|Alphaproteobacteria,3K2DT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2396671_3	1297865.APJD01000033_gene6981	1.286e-199	623.0	COG0583@1|root,COG0583@2|Bacteria,1N663@1224|Proteobacteria,2TRAK@28211|Alphaproteobacteria,3K308@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_2396671_2	398525.KB900701_gene1350	7.265e-233	722.0	COG3437@1|root,COG3437@2|Bacteria,1QW6V@1224|Proteobacteria,2TWQE@28211|Alphaproteobacteria,3JUGM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KT	HD domain	MA20_23615	-	-	-	-	-	-	-	-	-	-	-	HD,HD_5,Response_reg
SX1_k127_2396671_1	1297865.APJD01000033_gene6979	7.054e-289	888.0	COG2124@1|root,COG2124@2|Bacteria,1MV8Q@1224|Proteobacteria,2TU15@28211|Alphaproteobacteria,3JWC9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	p450
SX1_k127_2396671_4	1297865.APJD01000033_gene6978	1.047e-160	506.0	COG0318@1|root,COG0318@2|Bacteria,1MWF2@1224|Proteobacteria,2TU4I@28211|Alphaproteobacteria,3JR3C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	-	-	6.2.1.48	ko:K02182	-	-	-	-	ko00000,ko01000	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_2401059_2	1297865.APJD01000026_gene2599	1.597e-119	383.0	COG0563@1|root,COG0563@2|Bacteria,1N0HQ@1224|Proteobacteria,2UC20@28211|Alphaproteobacteria,3JW3F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Adenylate kinase and related kinases	flaR	-	-	-	-	-	-	-	-	-	-	-	AAA_18
SX1_k127_2401059_4	1230476.C207_01017	1.978e-92	306.0	COG2867@1|root,COG2867@2|Bacteria,1RGUH@1224|Proteobacteria,2U7D8@28211|Alphaproteobacteria,3JY38@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Polyketide cyclase / dehydrase and lipid transport	pasT	-	-	ko:K18588	-	-	-	-	ko00000	-	-	-	Polyketide_cyc
SX1_k127_2401059_5	1297865.APJD01000026_gene2597	2.464e-66	229.0	2E9ZT@1|root,33457@2|Bacteria,1N7P1@1224|Proteobacteria,2UF38@28211|Alphaproteobacteria,3K1GB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	BA14K-like protein	-	-	-	-	-	-	-	-	-	-	-	-	BA14K
SX1_k127_2401059_1	1230476.C207_01020	3.588e-137	437.0	COG0262@1|root,COG0262@2|Bacteria,1R5UU@1224|Proteobacteria,2U45H@28211|Alphaproteobacteria,3JZ11@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	RibD C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	RibD_C
SX1_k127_2401059_3	1297865.APJD01000026_gene2595	5.212e-112	367.0	COG1546@1|root,COG1546@2|Bacteria,1RH2Y@1224|Proteobacteria,2U94H@28211|Alphaproteobacteria,3JRAB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the CinA family	cinA	-	3.5.1.42	ko:K03743	ko00760,map00760	-	R02322	RC00100	ko00000,ko00001,ko01000	-	-	-	CinA
SX1_k127_2401059_0	1297865.APJD01000026_gene2594	2.618e-261	808.0	COG0245@1|root,COG1211@1|root,COG0245@2|Bacteria,COG1211@2|Bacteria,1MVHA@1224|Proteobacteria,2TRQC@28211|Alphaproteobacteria,3JSCM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF)	ispDF	-	2.7.7.60,4.6.1.12	ko:K01770,ko:K12506	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05633,R05637	RC00002,RC01440	ko00000,ko00001,ko00002,ko01000	-	-	-	IspD,YgbB
SX1_k127_2401059_6	398525.KB900701_gene5024	4.125e-46	168.0	COG0042@1|root,COG0042@2|Bacteria,1MV5V@1224|Proteobacteria,2TRC8@28211|Alphaproteobacteria,3JSGQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines	dusB	-	-	ko:K05540	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Dus
SX1_k127_2405445_12	1297865.APJD01000026_gene2448	1.263e-40	151.0	COG2938@1|root,COG2938@2|Bacteria,1N6SJ@1224|Proteobacteria,2UFF5@28211|Alphaproteobacteria,3K0G7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Flavinator of succinate dehydrogenase	-	-	-	ko:K09159	-	-	-	-	ko00000,ko02048	-	-	-	Sdh5
SX1_k127_2405445_0	1297865.APJD01000026_gene2447	0.0	1380.0	COG1200@1|root,COG1200@2|Bacteria,1MWN2@1224|Proteobacteria,2TR86@28211|Alphaproteobacteria,3JQTX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	RecG wedge domain	recG	GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494	3.6.4.12	ko:K03655	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,Helicase_C,RecG_wedge
SX1_k127_2405445_4	1297865.APJD01000026_gene2446	7.28e-246	762.0	COG0654@1|root,COG0654@2|Bacteria,1NUP2@1224|Proteobacteria,2TUNE@28211|Alphaproteobacteria,3JVFZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	FAD binding domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3
SX1_k127_2405445_10	1297865.APJD01000026_gene2445	1.381e-73	261.0	COG0607@1|root,COG0607@2|Bacteria,1Q6TG@1224|Proteobacteria,2US71@28211|Alphaproteobacteria,3K47W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rhodanese Homology Domain	-	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
SX1_k127_2405445_8	1230476.C207_01556	2.686e-155	493.0	COG2928@1|root,COG2928@2|Bacteria,1MWT5@1224|Proteobacteria,2TZPK@28211|Alphaproteobacteria,3JSAM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF502)	MA20_12960	-	-	-	-	-	-	-	-	-	-	-	DUF502
SX1_k127_2405445_2	1297865.APJD01000026_gene2443	0.0	1185.0	COG0449@1|root,COG0449@2|Bacteria,1MW4K@1224|Proteobacteria,2TQPM@28211|Alphaproteobacteria,3JU26@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source	glmS	GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576	2.6.1.16	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931	-	R00768	RC00010,RC00163,RC02752	ko00000,ko00001,ko01000,ko01002	-	-	-	GATase_6,SIS
SX1_k127_2405445_6	1297865.APJD01000026_gene2442	3.34e-200	627.0	28H7K@1|root,2Z7JT@2|Bacteria,1MV01@1224|Proteobacteria,2U0G6@28211|Alphaproteobacteria,3JYI0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system	kdgT	-	-	ko:K02526	-	-	-	-	ko00000,ko02000	2.A.10.1	-	-	KdgT
SX1_k127_2405445_3	1297865.APJD01000026_gene2441	6.851e-263	811.0	COG2199@1|root,COG3706@2|Bacteria,1R7HC@1224|Proteobacteria,2U0G1@28211|Alphaproteobacteria,3JV35@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	diguanylate cyclase	-	-	-	-	-	-	-	-	-	-	-	-	GAF,GAF_2,GGDEF
SX1_k127_2405445_11	1297865.APJD01000026_gene2440	3.041e-50	181.0	2EJ4F@1|root,33CVP@2|Bacteria,1N6QT@1224|Proteobacteria,2UIJR@28211|Alphaproteobacteria,3K4D6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2405445_1	1297865.APJD01000026_gene2439	0.0	1373.0	COG4716@1|root,COG4716@2|Bacteria,1MVTV@1224|Proteobacteria,2TR2G@28211|Alphaproteobacteria,3JSEG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	MCRA family	-	-	4.2.1.53	ko:K10254	-	-	-	-	ko00000,ko01000	-	-	-	MCRA
SX1_k127_2405445_7	1297865.APJD01000026_gene2438	1.462e-173	547.0	COG2114@1|root,COG2114@2|Bacteria,1P8ZU@1224|Proteobacteria,2TRC7@28211|Alphaproteobacteria,3JUCZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc
SX1_k127_2405445_5	1297865.APJD01000026_gene2437	1.134e-237	735.0	COG0388@1|root,COG0388@2|Bacteria,1MWQG@1224|Proteobacteria,2TYHX@28211|Alphaproteobacteria,3JTNQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Carbon-nitrogen hydrolase	-	-	3.5.5.7	ko:K01502	ko00643,ko01120,map00643,map01120	-	R05358	RC01336	ko00000,ko00001,ko01000	-	-	-	CN_hydrolase
SX1_k127_2405445_9	1297865.APJD01000026_gene2436	1.25e-114	380.0	COG0583@1|root,COG0583@2|Bacteria,1MWVB@1224|Proteobacteria,2TQXV@28211|Alphaproteobacteria,3JTSJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_2410959_3	1297865.APJD01000007_gene2211	4.401e-166	523.0	COG1024@1|root,COG1024@2|Bacteria,1R3Q4@1224|Proteobacteria,2TRE2@28211|Alphaproteobacteria,3JV6K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	-	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_2410959_5	1297865.APJD01000007_gene2210	4.536e-112	363.0	COG1309@1|root,COG1309@2|Bacteria,1N1Q3@1224|Proteobacteria,2U4MU@28211|Alphaproteobacteria,3JX3U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_2410959_4	1297865.APJD01000007_gene2209	1.022e-153	486.0	COG1028@1|root,COG1028@2|Bacteria,1MWJQ@1224|Proteobacteria,2TVRP@28211|Alphaproteobacteria,3JWPZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_2410959_2	1297865.APJD01000007_gene2208	2.828e-205	640.0	COG0625@1|root,COG0625@2|Bacteria,1P71B@1224|Proteobacteria,2U1A5@28211|Alphaproteobacteria,3JXHU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	GST_C_2,GST_N_3
SX1_k127_2410959_1	1297865.APJD01000007_gene2207	6.994e-227	704.0	COG2141@1|root,COG2141@2|Bacteria,1MUTJ@1224|Proteobacteria,2TTZI@28211|Alphaproteobacteria,3JRIB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Luciferase-like monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	Bac_luciferase
SX1_k127_2410959_0	1297865.APJD01000007_gene2206	0.0	1064.0	COG3203@1|root,COG3203@2|Bacteria,1MXN6@1224|Proteobacteria,2TSH7@28211|Alphaproteobacteria,3JQSQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane	ropAch1	-	-	-	-	-	-	-	-	-	-	-	Porin_2
SX1_k127_2412947_7	1297865.APJD01000026_gene2463	3.687e-57	200.0	2CFZE@1|root,2ZZ4A@2|Bacteria,1NW60@1224|Proteobacteria,2US9J@28211|Alphaproteobacteria,3K47A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2412947_0	1297865.APJD01000026_gene2462	1.037e-252	784.0	COG4992@1|root,COG4992@2|Bacteria,1MV3C@1224|Proteobacteria,2U0HZ@28211|Alphaproteobacteria,3JTHX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Aminotransferase class-III	MA20_13060	GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363	2.6.1.11,2.6.1.17	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00028,M00845	R02283,R04475	RC00006,RC00062	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3
SX1_k127_2412947_2	1297865.APJD01000026_gene2461	1.24e-216	673.0	COG0604@1|root,COG0604@2|Bacteria,1MWBD@1224|Proteobacteria,2TS3Z@28211|Alphaproteobacteria,3JR0C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Zinc-binding dehydrogenase	qor	-	1.6.5.5	ko:K00344	-	-	-	-	ko00000,ko01000	-	-	-	ADH_N,ADH_zinc_N
SX1_k127_2412947_5	1297865.APJD01000026_gene2460	1.454e-139	445.0	COG0861@1|root,COG0861@2|Bacteria,1MWC9@1224|Proteobacteria,2TTT6@28211|Alphaproteobacteria,3JT4Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Integral membrane protein TerC family	terC	-	-	-	-	-	-	-	-	-	-	-	TerC
SX1_k127_2412947_4	1230476.C207_06751	8.014e-145	460.0	COG1183@1|root,COG1183@2|Bacteria,1NGCJ@1224|Proteobacteria,2TS1K@28211|Alphaproteobacteria,3JTX5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP	pcs	GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0050520,GO:0071704,GO:0090407,GO:1901576	2.7.8.24	ko:K01004	ko00564,ko01110,map00564,map01110	-	R05794	RC00002,RC00017,RC02795	ko00000,ko00001,ko01000	-	-	-	CDP-OH_P_transf
SX1_k127_2412947_1	1297865.APJD01000026_gene2458	8.62e-249	771.0	COG0654@1|root,COG0654@2|Bacteria,1MU6I@1224|Proteobacteria,2TT9M@28211|Alphaproteobacteria,3JSU0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	FAD binding domain	ubiH	-	-	ko:K03185	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00117	R04989,R08773	RC02670	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_3
SX1_k127_2412947_3	1297865.APJD01000026_gene2457	1.432e-200	626.0	COG0679@1|root,COG0679@2|Bacteria,1PINE@1224|Proteobacteria,2TUJR@28211|Alphaproteobacteria,3JR4Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Membrane transport protein	mdcF	-	-	ko:K07088	-	-	-	-	ko00000	-	-	-	Mem_trans
SX1_k127_2412947_6	1297865.APJD01000026_gene2456	1.419e-69	236.0	COG3785@1|root,COG3785@2|Bacteria,1RHM7@1224|Proteobacteria,2U9MS@28211|Alphaproteobacteria,3JYP1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Hemimethylated DNA-binding protein YccV like	hspQ	-	-	ko:K11940	-	-	-	-	ko00000,ko03036	-	-	-	YccV-like
SX1_k127_2412947_8	1297865.APJD01000026_gene2455	5.72e-54	190.0	COG0477@1|root,COG2814@2|Bacteria,1MU9G@1224|Proteobacteria,2TSPI@28211|Alphaproteobacteria,3JU62@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	araJ	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K19577	-	-	-	-	ko00000,ko02000	2.A.1.2.65	-	-	MFS_1,Sugar_tr
SX1_k127_2429148_2	1297865.APJD01000008_gene5591	2.245e-30	121.0	28NKC@1|root,2ZBM7@2|Bacteria,1MWMY@1224|Proteobacteria,2TU05@28211|Alphaproteobacteria,3JS0Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_08580	-	-	-	-	-	-	-	-	-	-	-	Endostatin
SX1_k127_2429148_3	172088.AUGA01000067_gene6883	1.425e-05	47.0	COG2267@1|root,COG2267@2|Bacteria,1RCQT@1224|Proteobacteria,2U67H@28211|Alphaproteobacteria,3JYA0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
SX1_k127_2429148_0	1297865.APJD01000008_gene5592	2.49e-186	586.0	COG4395@1|root,COG4395@2|Bacteria,1NSUG@1224|Proteobacteria,2U0SF@28211|Alphaproteobacteria,3JR8D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tim44	MA20_08550	-	-	-	-	-	-	-	-	-	-	-	Tim44
SX1_k127_2429148_1	1297865.APJD01000008_gene5593	1.216e-170	536.0	COG0784@1|root,COG4191@1|root,COG0784@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TQQ9@28211|Alphaproteobacteria,3JTUH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	His Kinase A (phosphoacceptor) domain	cckA	-	2.7.13.3	ko:K13587	ko02020,ko04112,map02020,map04112	M00512	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA,PAS,PAS_4,PAS_8,PAS_9,Response_reg
SX1_k127_2432638_2	1131813.AQVT01000001_gene124	1.343e-08	60.0	COG0526@1|root,COG0526@2|Bacteria,1MZ5J@1224|Proteobacteria,2TR0C@28211|Alphaproteobacteria,1JUJI@119045|Methylobacteriaceae	28211|Alphaproteobacteria	CO	PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen	tlpA	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Redoxin
SX1_k127_2432638_0	316055.RPE_4842	1.786e-225	707.0	COG0165@1|root,COG0165@2|Bacteria,1MUTU@1224|Proteobacteria,2TR4H@28211|Alphaproteobacteria,3JQV1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	argininosuccinate lyase	argH	GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	4.3.2.1	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	M00029,M00844,M00845	R01086	RC00445,RC00447	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ASL_C2,Lyase_1
SX1_k127_2432638_1	1429916.X566_04040	9.728e-111	370.0	COG0028@1|root,COG0028@2|Bacteria,1N4U6@1224|Proteobacteria,2U0I6@28211|Alphaproteobacteria,3K2P0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Thiamine pyrophosphate enzyme, central domain	-	-	-	-	-	-	-	-	-	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
SX1_k127_2434010_3	331869.BAL199_01599	0.00013	51.0	COG4608@1|root,COG4608@2|Bacteria,1NU4K@1224|Proteobacteria,2TQTV@28211|Alphaproteobacteria,4BPZZ@82117|unclassified Alphaproteobacteria	28211|Alphaproteobacteria	P	Belongs to the ABC transporter superfamily	-	-	-	ko:K02032	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
SX1_k127_2434010_0	331869.BAL199_01594	2.804e-165	533.0	COG0444@1|root,COG0444@2|Bacteria,1R4KB@1224|Proteobacteria,2TR0J@28211|Alphaproteobacteria,4BRBM@82117|unclassified Alphaproteobacteria	28211|Alphaproteobacteria	P	COG0444 ABC-type dipeptide oligopeptide nickel transport system, ATPase component	-	-	-	ko:K02031	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
SX1_k127_2434010_1	331869.BAL199_01589	1.229e-140	451.0	COG1173@1|root,COG1173@2|Bacteria,1MVER@1224|Proteobacteria,2TRB3@28211|Alphaproteobacteria	28211|Alphaproteobacteria	EP	COG1173 ABC-type dipeptide oligopeptide nickel transport systems permease components	-	-	-	ko:K02034	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1,OppC_N
SX1_k127_2434010_2	331869.BAL199_01584	1.565e-28	114.0	COG0601@1|root,COG0601@2|Bacteria,1MU8Z@1224|Proteobacteria,2TRH6@28211|Alphaproteobacteria,4BQ46@82117|unclassified Alphaproteobacteria	28211|Alphaproteobacteria	P	COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components	-	-	-	ko:K02033	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
SX1_k127_2438069_0	1297865.APJD01000005_gene3675	3.289e-296	909.0	COG3158@1|root,COG3158@2|Bacteria,1MUVH@1224|Proteobacteria,2TRVJ@28211|Alphaproteobacteria,3JTDY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Transport of potassium into the cell	-	-	-	ko:K03549	-	-	-	-	ko00000,ko02000	2.A.72	-	-	K_trans
SX1_k127_2438069_1	1297865.APJD01000005_gene3676	6.881e-209	649.0	COG2267@1|root,COG2267@2|Bacteria,1N8UK@1224|Proteobacteria,2U35V@28211|Alphaproteobacteria,3JX10@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6
SX1_k127_2438069_2	1297865.APJD01000005_gene3677	8.804e-161	506.0	COG2303@1|root,COG2303@2|Bacteria,1MV19@1224|Proteobacteria,2TQKQ@28211|Alphaproteobacteria,3JSZ3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	GMC oxidoreductase	MA20_15975	-	1.1.99.1	ko:K00108	ko00260,ko01100,map00260,map01100	M00555	R01025	RC00087	ko00000,ko00001,ko00002,ko01000	-	-	-	GMC_oxred_C,GMC_oxred_N
SX1_k127_2438583_4	1297865.APJD01000006_gene4736	1.574e-118	392.0	2CCJC@1|root,31PRJ@2|Bacteria,1R6D1@1224|Proteobacteria,2TV8P@28211|Alphaproteobacteria,3JT31@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2438583_2	1297865.APJD01000006_gene4737	1.065e-174	564.0	COG0842@1|root,COG0842@2|Bacteria,1MVUG@1224|Proteobacteria,2TSUF@28211|Alphaproteobacteria,3JRR2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	ABC-2 family transporter protein	MA20_34500	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane
SX1_k127_2438583_3	1297865.APJD01000006_gene4738	2.198e-167	533.0	COG1131@1|root,COG1131@2|Bacteria,1MX56@1224|Proteobacteria,2TTQM@28211|Alphaproteobacteria,3JSDM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	ATPases associated with a variety of cellular activities	MA20_34505	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
SX1_k127_2438583_1	1297865.APJD01000006_gene4739	3.41e-208	648.0	COG3391@1|root,COG3391@2|Bacteria,1P862@1224|Proteobacteria,2TR6Z@28211|Alphaproteobacteria,3JR8G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	TIGRFAM 40-residue YVTN family beta-propeller repeat protein	MA20_34510	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_D1,Lactonase
SX1_k127_2438583_0	1297865.APJD01000006_gene4740	7.419e-259	798.0	COG0683@1|root,COG0683@2|Bacteria,1MWGW@1224|Proteobacteria,2TRSD@28211|Alphaproteobacteria,3JTKJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein	MA20_34515	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_2443050_0	1297865.APJD01000001_gene5950	3.126e-210	653.0	COG0520@1|root,COG0520@2|Bacteria,1MUPD@1224|Proteobacteria,2TRNY@28211|Alphaproteobacteria,3JSRM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine	sufS	-	2.8.1.7,4.4.1.16	ko:K11717	ko00450,ko01100,map00450,map01100	-	R03599,R11528	RC00961,RC01789,RC02313	ko00000,ko00001,ko01000	-	-	-	Aminotran_5
SX1_k127_2443050_2	1297865.APJD01000001_gene5949	1.555e-72	246.0	COG2151@1|root,COG2151@2|Bacteria,1MZ9Y@1224|Proteobacteria,2U72U@28211|Alphaproteobacteria,3JYPK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Iron-sulfur cluster assembly protein	MA20_30700	-	-	-	-	-	-	-	-	-	-	-	FeS_assembly_P
SX1_k127_2443050_1	1230476.C207_01358	1.788e-79	265.0	COG0316@1|root,COG0316@2|Bacteria,1RH6T@1224|Proteobacteria,2UBWJ@28211|Alphaproteobacteria,3JYPC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the HesB IscA family	iscA	GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0009058,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0018130,GO:0019438,GO:0019538,GO:0022607,GO:0031163,GO:0031974,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051537,GO:0051540,GO:0051604,GO:0070013,GO:0071704,GO:0071840,GO:0097428,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	-	ko:K13628	-	-	-	-	ko00000,ko03016	-	-	-	Fe-S_biosyn
SX1_k127_2443050_3	1297865.APJD01000001_gene5947	7.171e-66	233.0	COG3070@1|root,COG3070@2|Bacteria,1N8X8@1224|Proteobacteria,2UFNC@28211|Alphaproteobacteria,3JYWH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	TfoX N-terminal domain	MA20_30690	-	-	ko:K07343	-	-	-	-	ko00000	-	-	-	TfoX_N
SX1_k127_2448958_1	1297865.APJD01000009_gene2711	1.53e-110	357.0	COG3156@1|root,COG3156@2|Bacteria,1RE7R@1224|Proteobacteria,2U72M@28211|Alphaproteobacteria,3JYYI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Type II secretion system (T2SS), protein K	-	-	-	-	-	-	-	-	-	-	-	-	T2SSK
SX1_k127_2448958_2	1297865.APJD01000009_gene2712	2.954e-83	277.0	29RQE@1|root,30CTU@2|Bacteria,1NJ1C@1224|Proteobacteria,2UKA5@28211|Alphaproteobacteria,3K1QV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2448958_0	1297865.APJD01000009_gene2713	0.0	1333.0	COG1450@1|root,COG1450@2|Bacteria,1MUUA@1224|Proteobacteria,2TT8A@28211|Alphaproteobacteria,3JUPJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	Bacterial type II/III secretion system short domain	-	-	-	ko:K02453	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	Secretin,Secretin_N
SX1_k127_2458097_11	1297865.APJD01000003_gene6373	4.136e-44	160.0	COG5352@1|root,COG5352@2|Bacteria,1RHI6@1224|Proteobacteria,2TS7F@28211|Alphaproteobacteria,3JSUB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	GcrA cell cycle regulator	gcrA	-	-	ko:K13583	ko04112,map04112	-	-	-	ko00000,ko00001	-	-	-	GcrA
SX1_k127_2458097_7	1230476.C207_02747	5.329e-150	475.0	COG0745@1|root,COG0745@2|Bacteria,1MY2Z@1224|Proteobacteria,2TRFZ@28211|Alphaproteobacteria,3JRGR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Transcriptional regulatory protein, C terminal	phoB	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	-	ko:K07657	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
SX1_k127_2458097_8	172088.AUGA01000007_gene8507	4.564e-145	473.0	COG0704@1|root,COG0704@2|Bacteria,1MUMI@1224|Proteobacteria,2TQMN@28211|Alphaproteobacteria,3JVF2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Plays a role in the regulation of phosphate uptake	phoU	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186	-	ko:K02039	-	-	-	-	ko00000	-	-	-	PhoU
SX1_k127_2458097_5	1230476.C207_02749	4.533e-177	555.0	COG1117@1|root,COG1117@2|Bacteria,1MU16@1224|Proteobacteria,2TQX9@28211|Alphaproteobacteria,3JTBM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system	pstB	-	3.6.3.27	ko:K02036	ko02010,map02010	M00222	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.7	-	-	ABC_tran
SX1_k127_2458097_6	1297865.APJD01000003_gene6369	1.564e-168	531.0	COG0581@1|root,COG0581@2|Bacteria,1MUWB@1224|Proteobacteria,2TQYQ@28211|Alphaproteobacteria,3JSXG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Phosphate transport system permease protein PstA	pstA	GO:0003674,GO:0005215,GO:0005315,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0010921,GO:0015291,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0019220,GO:0019222,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0031323,GO:0033554,GO:0034220,GO:0035303,GO:0035435,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051174,GO:0051179,GO:0051234,GO:0051336,GO:0051716,GO:0055085,GO:0065007,GO:0065009,GO:0071944,GO:0098656,GO:0098660,GO:0098661	-	ko:K02038	ko02010,map02010	M00222	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.7	-	-	BPD_transp_1
SX1_k127_2458097_4	1230476.C207_02751	2.154e-198	620.0	COG0573@1|root,COG0573@2|Bacteria,1MVKP@1224|Proteobacteria,2TQU1@28211|Alphaproteobacteria,3JQNS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	probably responsible for the translocation of the substrate across the membrane	pstC	-	-	ko:K02037	ko02010,map02010	M00222	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.7	-	-	BPD_transp_1
SX1_k127_2458097_3	1297865.APJD01000003_gene6367	1.43e-214	668.0	COG0226@1|root,COG0226@2|Bacteria,1MUAZ@1224|Proteobacteria,2TTJA@28211|Alphaproteobacteria,3JU7Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Part of the ABC transporter complex PstSACB involved in phosphate import	pstS	-	-	ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	M00222	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.7	-	-	PBP_like_2
SX1_k127_2458097_1	1297865.APJD01000003_gene6366	5.829e-277	853.0	COG5002@1|root,COG5002@2|Bacteria,1MWF3@1224|Proteobacteria,2TR46@28211|Alphaproteobacteria,3JSP1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	His Kinase A (phosphoacceptor) domain	phoR	-	2.7.13.3	ko:K07636	ko02020,map02020	M00434	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA,PAS_4,PAS_8
SX1_k127_2458097_2	1230476.C207_02754	4.006e-221	686.0	COG0392@1|root,COG0392@2|Bacteria,1MXH9@1224|Proteobacteria,2TUMC@28211|Alphaproteobacteria,3JTNM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Lysylphosphatidylglycerol synthase TM region	MA20_22425	-	2.3.2.3	ko:K07027,ko:K14205	ko01503,ko02020,ko05150,map01503,map02020,map05150	M00726	-	-	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	2.A.1.3.37,4.D.2	-	-	DUF2156,LPG_synthase_TM
SX1_k127_2458097_10	1297865.APJD01000003_gene6364	1.183e-60	210.0	2A15D@1|root,30PB8@2|Bacteria,1RHY8@1224|Proteobacteria,2UDK4@28211|Alphaproteobacteria,3K085@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_22445	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2458097_0	1230476.C207_02759	1.749e-288	887.0	COG2885@1|root,COG2885@2|Bacteria,1MWHF@1224|Proteobacteria,2TUGX@28211|Alphaproteobacteria,3JTJQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the ompA family	MA20_22450	-	-	ko:K03286	-	-	-	-	ko00000,ko02000	1.B.6	-	-	BON,OmpA
SX1_k127_2458097_9	1297865.APJD01000003_gene6362	4.622e-136	462.0	COG0726@1|root,COG0726@2|Bacteria,1MVKH@1224|Proteobacteria,2TTEI@28211|Alphaproteobacteria,3JQWS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
SX1_k127_2471265_1	1297865.APJD01000007_gene1948	2.769e-155	490.0	COG1192@1|root,COG1192@2|Bacteria,1N4FM@1224|Proteobacteria,2U05C@28211|Alphaproteobacteria,3JSM8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Involved in chromosome partitioning	MA20_42465	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2471265_2	1297865.APJD01000007_gene1947	9.127e-144	456.0	COG0489@1|root,COG0489@2|Bacteria,1MWQ7@1224|Proteobacteria,2TWDW@28211|Alphaproteobacteria,3JR0J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	protein tyrosine kinase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2471265_3	1297865.APJD01000007_gene1946	5.076e-112	362.0	COG0503@1|root,COG0503@2|Bacteria,1MVZ6@1224|Proteobacteria,2TV7J@28211|Alphaproteobacteria,3JQWV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis	apt	-	2.4.2.7	ko:K00759	ko00230,ko01100,map00230,map01100	-	R00190,R01229,R04378	RC00063	ko00000,ko00001,ko01000,ko04147	-	-	-	Pribosyltran
SX1_k127_2471265_0	1297865.APJD01000007_gene1945	0.0	1463.0	COG0147@1|root,COG0512@1|root,COG0147@2|Bacteria,COG0512@2|Bacteria,1MVBJ@1224|Proteobacteria,2TRWB@28211|Alphaproteobacteria,3JU3J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Anthranilate synthase component I	trpE	-	4.1.3.27	ko:K13503	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00023	R00985,R00986	RC00010,RC02148,RC02414	ko00000,ko00001,ko00002,ko01000	-	-	-	Anth_synt_I_N,Chorismate_bind,GATase
SX1_k127_2472590_2	1297865.APJD01000004_gene5314	4.902e-17	80.0	COG2815@1|root,COG4640@1|root,COG2815@2|Bacteria,COG4640@2|Bacteria,1RIP7@1224|Proteobacteria,2UFX8@28211|Alphaproteobacteria,3K2FQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	YARHG	-	-	-	-	-	-	-	-	-	-	-	-	TIR_2,YARHG
SX1_k127_2472590_0	1297865.APJD01000004_gene5313	5.466e-174	545.0	COG3217@1|root,COG3217@2|Bacteria,1MVSP@1224|Proteobacteria,2U1ST@28211|Alphaproteobacteria,3JSY4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	MOSC N-terminal beta barrel domain	-	-	-	ko:K07140	-	-	-	-	ko00000	-	-	-	MOSC,MOSC_N
SX1_k127_2472590_1	1297865.APJD01000004_gene5312	2.275e-107	348.0	COG1247@1|root,COG1247@2|Bacteria,1RDNE@1224|Proteobacteria,2U9BP@28211|Alphaproteobacteria,3JVC4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Acetyltransferase (GNAT) domain	pat	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006473,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564	2.3.1.183	ko:K03823	ko00440,ko01130,map00440,map01130	-	R08871,R08938	RC00004,RC00064	ko00000,ko00001,ko01000	-	-	-	Acetyltransf_4
SX1_k127_2482288_3	1230476.C207_06581	4.434e-147	467.0	COG1529@1|root,COG1529@2|Bacteria,1MUEA@1224|Proteobacteria,2TQMW@28211|Alphaproteobacteria,3JQVN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain	MA20_27485	-	1.2.5.3	ko:K03520	-	-	R11168	RC02800	ko00000,ko01000	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2
SX1_k127_2482288_1	1230476.C207_06582	2.619e-209	653.0	COG0248@1|root,COG0248@2|Bacteria,1MV35@1224|Proteobacteria,2TT2C@28211|Alphaproteobacteria,3JRA2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	FP	Ppx/GppA phosphatase family	ppx	-	3.6.1.11,3.6.1.40	ko:K01524	ko00230,map00230	-	R03409	RC00002	ko00000,ko00001,ko01000	-	-	-	Ppx-GppA
SX1_k127_2482288_9	1038860.AXAP01000060_gene2284	0.000611	46.0	COG0135@1|root,COG0135@2|Bacteria,1RA87@1224|Proteobacteria,2U7CH@28211|Alphaproteobacteria,3JRQW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the TrpF family	trpF	-	5.3.1.24	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00023	R03509	RC00945	ko00000,ko00001,ko00002,ko01000	-	-	-	PRAI
SX1_k127_2482288_4	1297865.APJD01000014_gene492	1.044e-142	457.0	COG0293@1|root,COG0293@2|Bacteria,1MW1C@1224|Proteobacteria,2TSBW@28211|Alphaproteobacteria,3JRJX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit	ftsJ	-	2.1.1.166	ko:K02427	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	FtsJ
SX1_k127_2482288_2	1297865.APJD01000014_gene491	7.877e-193	602.0	COG0583@1|root,COG0583@2|Bacteria,1R7M1@1224|Proteobacteria,2VF1J@28211|Alphaproteobacteria,3K2IV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_2482288_7	113395.AXAI01000007_gene1224	9.076e-37	143.0	COG2329@1|root,COG2329@2|Bacteria,1Q4HA@1224|Proteobacteria,2UN5H@28211|Alphaproteobacteria,3K6BI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Antibiotic biosynthesis monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	ABM
SX1_k127_2482288_0	1230476.C207_06584	9.593e-303	931.0	COG0477@1|root,COG0477@2|Bacteria,1QTWJ@1224|Proteobacteria,2TVYQ@28211|Alphaproteobacteria,3JT2H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	MA20_27515	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_2482288_6	1297865.APJD01000014_gene488	1.025e-50	180.0	2DSYX@1|root,33HZJ@2|Bacteria,1N1YP@1224|Proteobacteria,2UCIJ@28211|Alphaproteobacteria,3K06M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2482288_5	1230476.C207_06586	3.272e-106	345.0	COG0516@1|root,COG0517@1|root,COG0516@2|Bacteria,COG0517@2|Bacteria,1MUJM@1224|Proteobacteria,2TQXC@28211|Alphaproteobacteria,3JSB9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth	guaB	GO:0003674,GO:0003824,GO:0003938,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	1.1.1.205,1.7.1.7	ko:K00088,ko:K00364	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	M00050	R01130,R01134,R08240	RC00143,RC00457,RC02207	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	CBS,IMPDH,NMO
SX1_k127_2485087_2	1382356.JQMP01000003_gene1692	2.228e-58	225.0	COG0277@1|root,COG0277@2|Bacteria,2G885@200795|Chloroflexi,27Z0Z@189775|Thermomicrobia	189775|Thermomicrobia	C	Berberine and berberine like	-	-	-	-	-	-	-	-	-	-	-	-	BBE,FAD_binding_4
SX1_k127_2485087_1	588932.JHOF01000017_gene2525	1.262e-97	329.0	COG0730@1|root,COG0730@2|Bacteria,1R6MR@1224|Proteobacteria,2URRK@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Sulfite exporter TauE/SafE	-	-	-	-	-	-	-	-	-	-	-	-	TauE
SX1_k127_2485087_0	1030157.AFMP01000011_gene3704	1.981e-162	524.0	COG0624@1|root,COG0624@2|Bacteria,1MWJS@1224|Proteobacteria,2TUHT@28211|Alphaproteobacteria,2K1MW@204457|Sphingomonadales	204457|Sphingomonadales	E	Acetylornithine deacetylase Succinyl-diaminopimelate	-	-	-	-	-	-	-	-	-	-	-	-	M20_dimer,Peptidase_M20,Peptidase_M28
SX1_k127_2485087_3	1385517.N800_07865	7.76e-55	198.0	COG0697@1|root,COG0697@2|Bacteria,1MXPW@1224|Proteobacteria,1SB7X@1236|Gammaproteobacteria,1X5BG@135614|Xanthomonadales	135614|Xanthomonadales	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_2491246_10	1297865.APJD01000036_gene1496	3.867e-48	172.0	COG3153@1|root,COG3153@2|Bacteria,1RD0C@1224|Proteobacteria,2U7AS@28211|Alphaproteobacteria,3JY5B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Acetyltransferase (GNAT) domain	MA20_06530	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_9
SX1_k127_2491246_12	1297865.APJD01000036_gene1495	4.325e-28	115.0	2AHGS@1|root,302IB@2|Bacteria,1NDA1@1224|Proteobacteria,2UJ1C@28211|Alphaproteobacteria,3K1AI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2491246_8	1297865.APJD01000036_gene1494	6.048e-78	262.0	COG0251@1|root,COG0251@2|Bacteria,1RH61@1224|Proteobacteria,2UAE3@28211|Alphaproteobacteria,3JY1G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Endoribonuclease L-PSP	MA20_06535	-	-	-	-	-	-	-	-	-	-	-	Ribonuc_L-PSP
SX1_k127_2491246_0	1297865.APJD01000036_gene1493	0.0	1022.0	COG5310@1|root,COG5310@2|Bacteria,1MUZB@1224|Proteobacteria,2TRTR@28211|Alphaproteobacteria,3JS29@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Saccharopine dehydrogenase C-terminal domain	hss	-	2.5.1.44	ko:K00808	ko00960,ko01110,map00960,map01110	-	R00018	RC00053	ko00000,ko00001,ko01000	-	-	-	Sacchrp_dh_C,Sacchrp_dh_NADP
SX1_k127_2491246_5	1297865.APJD01000036_gene1492	3.049e-164	518.0	COG4689@1|root,COG4689@2|Bacteria,1N4IP@1224|Proteobacteria,2TTZX@28211|Alphaproteobacteria,3JRAW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Catalyzes the conversion of acetoacetate to acetone and carbon dioxide	adc	-	4.1.1.4	ko:K01574	ko00072,ko00640,ko01100,map00072,map00640,map01100	M00088	R01366	RC00040	ko00000,ko00001,ko00002,ko01000	-	-	-	ADC
SX1_k127_2491246_9	1297865.APJD01000036_gene1491	1.047e-54	195.0	29FTD@1|root,302R3@2|Bacteria,1NDYK@1224|Proteobacteria,2UFW6@28211|Alphaproteobacteria,3K10N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2491246_7	1297865.APJD01000036_gene1490	1.708e-143	456.0	COG1285@1|root,COG1285@2|Bacteria,1MURJ@1224|Proteobacteria,2TT5N@28211|Alphaproteobacteria,3JSF1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	MgtC family	MA20_06555	-	-	ko:K07507	-	-	-	-	ko00000,ko02000	9.B.20	-	-	MgtC
SX1_k127_2491246_2	1297865.APJD01000036_gene1489	2.646e-223	693.0	COG2319@1|root,COG2319@2|Bacteria,1MV7S@1224|Proteobacteria,2TTNW@28211|Alphaproteobacteria,3JRPH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Anaphase-promoting complex subunit 4 WD40 domain	MA20_06560	-	-	-	-	-	-	-	-	-	-	-	ANAPC4_WD40,WD40
SX1_k127_2491246_1	1297865.APJD01000036_gene1488	1.887e-224	697.0	COG0523@1|root,COG0523@2|Bacteria,1MVZV@1224|Proteobacteria,2TS4B@28211|Alphaproteobacteria,3JSTE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	cobalamin synthesis protein	MA20_06565	-	-	-	-	-	-	-	-	-	-	-	CobW_C,cobW
SX1_k127_2491246_3	1297865.APJD01000036_gene1487	3.738e-177	573.0	COG0803@1|root,COG0803@2|Bacteria,1MVW9@1224|Proteobacteria,2TQTF@28211|Alphaproteobacteria,3JRQN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the bacterial solute-binding protein 9 family	znuA	-	-	ko:K02077,ko:K09815	ko02010,map02010	M00242,M00244	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.15,3.A.1.15.3,3.A.1.15.5	-	-	ZnuA
SX1_k127_2491246_4	1297865.APJD01000036_gene1486	7.689e-166	536.0	COG1108@1|root,COG1108@2|Bacteria,1MVC2@1224|Proteobacteria,2TS2V@28211|Alphaproteobacteria,3JV3H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ABC 3 transport family	MA20_06575	-	-	ko:K02075	-	M00244	-	-	ko00000,ko00002,ko02000	3.A.1.15	-	-	ABC-3
SX1_k127_2491246_6	1297865.APJD01000036_gene1485	3.811e-157	500.0	COG1121@1|root,COG1121@2|Bacteria,1MW47@1224|Proteobacteria,2TRJA@28211|Alphaproteobacteria,3JRGF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ABC transporter	MA20_06580	-	-	ko:K02074	-	M00244	-	-	ko00000,ko00002,ko02000	3.A.1.15	-	-	ABC_tran
SX1_k127_2496631_14	398525.KB900701_gene7029	5.169e-21	93.0	2AJ03@1|root,319I4@2|Bacteria,1NSR6@1224|Proteobacteria,2UR2W@28211|Alphaproteobacteria,3K3BF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2496631_8	172088.AUGA01000012_gene7116	2.822e-127	410.0	COG5385@1|root,COG5385@2|Bacteria,1MVEY@1224|Proteobacteria,2TSE6@28211|Alphaproteobacteria,3JS8T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Histidine phosphotransferase C-terminal domain	MA20_46320	-	-	ko:K13588	ko02020,ko04112,map02020,map04112	-	-	-	ko00000,ko00001	-	-	-	HPTransfase
SX1_k127_2496631_4	1297865.APJD01000023_gene1021	4.524e-176	552.0	COG1218@1|root,COG1218@2|Bacteria,1N0GY@1224|Proteobacteria,2TT7B@28211|Alphaproteobacteria,3JR4B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Inositol monophosphatase family	cysQ	-	3.1.3.7	ko:K01082	ko00920,ko01100,ko01120,ko01130,map00920,map01100,map01120,map01130	-	R00188,R00508	RC00078	ko00000,ko00001,ko01000,ko03016	-	-	-	Inositol_P
SX1_k127_2496631_11	1297865.APJD01000023_gene1022	1.022e-98	323.0	COG3350@1|root,COG3350@2|Bacteria,1N0GC@1224|Proteobacteria,2UBRM@28211|Alphaproteobacteria,3JXT6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	YHS domain protein	-	-	-	-	-	-	-	-	-	-	-	-	YHS
SX1_k127_2496631_7	1297865.APJD01000023_gene1023	7.755e-129	411.0	COG5400@1|root,COG5400@2|Bacteria,1RASG@1224|Proteobacteria,2U590@28211|Alphaproteobacteria,3JSC3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1134)	MA20_46305	-	-	-	-	-	-	-	-	-	-	-	DUF1134
SX1_k127_2496631_1	1297865.APJD01000023_gene1024	2.036e-249	773.0	COG2433@1|root,COG2433@2|Bacteria,1QW6M@1224|Proteobacteria,2TWQ2@28211|Alphaproteobacteria,3JRK5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Pfam Transposase IS66	MA20_46300	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2496631_12	1297865.APJD01000023_gene1025	5.388e-71	242.0	29WQG@1|root,30IBE@2|Bacteria,1RB80@1224|Proteobacteria,2U7XD@28211|Alphaproteobacteria,3JYTQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF4118
SX1_k127_2496631_15	1230476.C207_05455	2.786e-20	91.0	2BJX9@1|root,32E9Q@2|Bacteria,1NNN6@1224|Proteobacteria,2UJET@28211|Alphaproteobacteria,3K21Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2496631_13	1297865.APJD01000023_gene1027	2.958e-31	126.0	2BUWN@1|root,32Q8S@2|Bacteria,1NA41@1224|Proteobacteria,2UICJ@28211|Alphaproteobacteria,3K1C3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2496631_10	1297865.APJD01000023_gene1028	3.815e-114	369.0	2BW8D@1|root,330YB@2|Bacteria,1QI1V@1224|Proteobacteria,2TV5Z@28211|Alphaproteobacteria,3JVX0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2496631_0	1297865.APJD01000023_gene1029	5.313e-311	956.0	COG0028@1|root,COG0028@2|Bacteria,1MX6Q@1224|Proteobacteria,2TR5N@28211|Alphaproteobacteria,3JR6B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain	MA20_04440	-	2.2.1.6,4.1.1.7	ko:K01576,ko:K01652	ko00290,ko00627,ko00650,ko00660,ko00770,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00290,map00627,map00650,map00660,map00770,map01100,map01110,map01120,map01130,map01210,map01230	M00019,M00570	R00006,R00014,R00226,R01764,R02672,R03050,R04672,R04673,R08648	RC00027,RC00106,RC00595,RC01192,RC02744,RC02893	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_N
SX1_k127_2496631_9	1297865.APJD01000023_gene1030	6.417e-121	388.0	COG1376@1|root,COG1376@2|Bacteria,1NHM3@1224|Proteobacteria,2TUPY@28211|Alphaproteobacteria,3JSDB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	L,D-transpeptidase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	YkuD
SX1_k127_2496631_5	1297865.APJD01000023_gene1031	2.455e-170	536.0	2BWZZ@1|root,2Z86E@2|Bacteria,1MW89@1224|Proteobacteria,2U08W@28211|Alphaproteobacteria,3JVIA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2927)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2927
SX1_k127_2496631_3	1297865.APJD01000023_gene1032	1.561e-213	665.0	COG0789@1|root,COG0789@2|Bacteria,1PEAD@1224|Proteobacteria,2U2BW@28211|Alphaproteobacteria,3JXHI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, mercury resistance	-	-	-	-	-	-	-	-	-	-	-	-	MerR_1
SX1_k127_2496631_2	1297865.APJD01000023_gene1033	4.445e-214	665.0	COG0583@1|root,COG0583@2|Bacteria,1MV0E@1224|Proteobacteria,2TT1Z@28211|Alphaproteobacteria,3JWB2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_2496631_6	1297865.APJD01000023_gene1034	4.728e-154	487.0	COG3004@1|root,COG3004@2|Bacteria,1MW15@1224|Proteobacteria,2TSI5@28211|Alphaproteobacteria,3JX2W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	) H( ) antiporter that extrudes sodium in exchange for external protons	nhaA	-	-	ko:K03313	-	-	-	-	ko00000,ko02000	2.A.33.1	-	-	Na_H_antiport_1
SX1_k127_2496650_8	1297865.APJD01000014_gene840	3.965e-131	421.0	28I3D@1|root,2Z876@2|Bacteria,1P0DR@1224|Proteobacteria,2TTG2@28211|Alphaproteobacteria,3JUSV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PilZ domain	MA20_31715	-	-	-	-	-	-	-	-	-	-	-	PilZ
SX1_k127_2496650_1	1297865.APJD01000014_gene839	0.0	1040.0	COG0654@1|root,COG0654@2|Bacteria,1MUN4@1224|Proteobacteria,2TQT8@28211|Alphaproteobacteria,3JTRW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	FAD binding domain	pcpB	-	1.14.13.127,1.14.13.50	ko:K03391,ko:K05712	ko00360,ko00361,ko00364,ko01100,ko01120,ko01220,map00360,map00361,map00364,map01100,map01120,map01220	M00545	R03982,R06786,R06787,R07779	RC00236,RC01932	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_3
SX1_k127_2496650_5	1297865.APJD01000014_gene838	1.018e-217	675.0	COG1398@1|root,COG1398@2|Bacteria,1N2MA@1224|Proteobacteria,2TT62@28211|Alphaproteobacteria,3JRW3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Fatty acid desaturase	-	-	1.14.19.1	ko:K00507	ko01040,ko01212,ko03320,ko04152,ko04212,map01040,map01212,map03320,map04152,map04212	-	R02222	RC00917	ko00000,ko00001,ko01000,ko01004	-	-	-	FA_desaturase
SX1_k127_2496650_7	1297865.APJD01000014_gene837	1.946e-143	458.0	COG2755@1|root,COG2755@2|Bacteria,1N85H@1224|Proteobacteria,2UGNB@28211|Alphaproteobacteria,3K398@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	GDSL-like Lipase/Acylhydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
SX1_k127_2496650_4	1297865.APJD01000014_gene836	8.233e-224	695.0	29CTN@1|root,2ZZRT@2|Bacteria,1N1AV@1224|Proteobacteria,2UE3T@28211|Alphaproteobacteria,3K0RH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2496650_9	1297865.APJD01000014_gene835	1.614e-101	331.0	2DM3Q@1|root,31KK0@2|Bacteria,1RHZE@1224|Proteobacteria,2TZV8@28211|Alphaproteobacteria,3K715@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2496650_2	1297865.APJD01000014_gene834	9.582e-268	824.0	COG1063@1|root,COG1063@2|Bacteria,1MV9A@1224|Proteobacteria,2TSWA@28211|Alphaproteobacteria,3JRCS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glucose dehydrogenase C-terminus	MA20_31690	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_zinc_N
SX1_k127_2496650_0	1297865.APJD01000014_gene833	0.0	1298.0	COG0664@1|root,COG1752@1|root,COG0664@2|Bacteria,COG1752@2|Bacteria,1MUM9@1224|Proteobacteria,2TVQR@28211|Alphaproteobacteria,3JUCX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Patatin-like phospholipase	-	-	-	ko:K07001	-	-	-	-	ko00000	-	-	-	Patatin,cNMP_binding
SX1_k127_2496650_3	172088.AUGA01000020_gene3489	5.492e-244	757.0	COG3964@1|root,COG3964@2|Bacteria,1MVC7@1224|Proteobacteria,2TSUD@28211|Alphaproteobacteria,3JSBJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Amidohydrolase family	MA20_40145	-	3.5.2.3	ko:K01465	ko00240,ko01100,map00240,map01100	M00051	R01993	RC00632	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1,Amidohydro_3
SX1_k127_2496650_6	1297865.APJD01000014_gene831	5.333e-165	519.0	COG1629@1|root,COG3637@1|root,COG3637@2|Bacteria,COG4771@2|Bacteria,1QTS8@1224|Proteobacteria,2TW3Y@28211|Alphaproteobacteria,3K6ZY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	MP	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SX1_k127_2503849_3	1297865.APJD01000011_gene6711	1.544e-67	230.0	COG0251@1|root,COG0251@2|Bacteria,1MZ5K@1224|Proteobacteria,2U9DU@28211|Alphaproteobacteria,3JYR6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Endoribonuclease L-PSP	MA20_22140	-	-	-	-	-	-	-	-	-	-	-	Ribonuc_L-PSP
SX1_k127_2503849_0	1297865.APJD01000011_gene6712	0.0	1033.0	COG2346@1|root,COG3369@1|root,COG3592@1|root,COG2346@2|Bacteria,COG3369@2|Bacteria,COG3592@2|Bacteria,1RG77@1224|Proteobacteria,2U1MY@28211|Alphaproteobacteria,3JUUD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Iron-binding zinc finger CDGSH type	-	-	-	ko:K06886	-	-	-	-	ko00000	-	-	-	Bac_globin,Fer4_19,zf-CDGSH
SX1_k127_2503849_2	1297865.APJD01000011_gene6713	2.452e-74	252.0	COG1733@1|root,COG1733@2|Bacteria,1RDT8@1224|Proteobacteria,2U8IQ@28211|Alphaproteobacteria,3JZ41@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	HxlR-like helix-turn-helix	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
SX1_k127_2503849_1	1297865.APJD01000011_gene6714	8.859e-233	723.0	COG0477@1|root,COG2814@2|Bacteria,1R50B@1224|Proteobacteria,2U1YA@28211|Alphaproteobacteria,3JWT8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	COG0477 Permeases of the major facilitator superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_2507791_2	1297865.APJD01000005_gene3517	1.889e-151	479.0	COG1173@1|root,COG1173@2|Bacteria,1MUG0@1224|Proteobacteria,2VETJ@28211|Alphaproteobacteria,3JRE7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	N-terminal TM domain of oligopeptide transport permease C	MA20_16780	-	-	ko:K02034	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1,OppC_N
SX1_k127_2507791_1	1297865.APJD01000005_gene3516	2.724e-163	516.0	COG0251@1|root,COG0251@2|Bacteria,1N1B6@1224|Proteobacteria,2TZWE@28211|Alphaproteobacteria,3JRZG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	oxidation-reduction process	MA20_16785	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2507791_0	1297865.APJD01000005_gene3515	0.0	1107.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JRYN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	MA20_16805	-	-	ko:K18138,ko:K18307	ko01501,ko01503,ko02024,map01501,map01503,map02024	M00644,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	2.A.6.2,2.A.6.2.20,2.A.6.2.32	-	-	ACR_tran
SX1_k127_2524225_1	398525.KB900701_gene7261	1.596e-92	306.0	COG0583@1|root,COG0583@2|Bacteria,1N663@1224|Proteobacteria,2TRAK@28211|Alphaproteobacteria,3JUEZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	MA20_42410	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_2524225_2	1297865.APJD01000007_gene1960	4.432e-92	304.0	COG3631@1|root,COG3631@2|Bacteria,1RACS@1224|Proteobacteria,2U5CN@28211|Alphaproteobacteria,3JYBQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SnoaL-like domain	-	-	-	ko:K06893	-	-	-	-	ko00000	-	-	-	SnoaL_2
SX1_k127_2524225_0	1297865.APJD01000007_gene1962	3.461e-148	471.0	COG0625@1|root,COG0625@2|Bacteria,1MW27@1224|Proteobacteria,2TUK1@28211|Alphaproteobacteria,3JTJI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, C-terminal domain	MA20_42385	-	-	ko:K11209	-	-	-	-	ko00000,ko01000	-	-	-	GST_C,GST_C_2,GST_N,GST_N_3
SX1_k127_2524225_3	1297865.APJD01000007_gene1963	1.28e-46	168.0	COG2189@1|root,COG2189@2|Bacteria,1MX9M@1224|Proteobacteria,2TSW9@28211|Alphaproteobacteria,3JT5A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Belongs to the N(4) N(6)-methyltransferase family	ccrM	-	2.1.1.72	ko:K13581	ko04112,map04112	-	-	-	ko00000,ko00001,ko01000,ko02048	-	-	-	N6_N4_Mtase
SX1_k127_2537079_2	1230476.C207_04423	3.371e-101	334.0	COG0387@1|root,COG0387@2|Bacteria,1MWD8@1224|Proteobacteria,2TS6S@28211|Alphaproteobacteria,3JRAK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Sodium/calcium exchanger protein	-	-	-	ko:K07300	-	-	-	-	ko00000,ko02000	2.A.19	-	-	Na_Ca_ex
SX1_k127_2537079_0	1297865.APJD01000022_gene328	1.723e-173	544.0	COG1073@1|root,COG1073@2|Bacteria,1RIWI@1224|Proteobacteria,2UAKC@28211|Alphaproteobacteria,3JUS4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	COG1073 Hydrolases of the alpha beta superfamily	-	-	-	ko:K06889	-	-	-	-	ko00000	-	-	-	Abhydrolase_1,Hydrolase_4,Peptidase_S9
SX1_k127_2537079_3	1297865.APJD01000022_gene327	4.068e-29	121.0	2EJ6Q@1|root,33CXX@2|Bacteria,1NGPE@1224|Proteobacteria,2UJNQ@28211|Alphaproteobacteria,3K1QG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2537079_1	1230476.C207_04425	1.225e-160	506.0	COG1282@1|root,COG1282@2|Bacteria,1MUP4@1224|Proteobacteria,2TQN1@28211|Alphaproteobacteria,3JTA7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane	pntB	GO:0008150,GO:0008152,GO:0055114	1.6.1.2	ko:K00325	ko00760,ko01100,map00760,map01100	-	R00112	RC00001	ko00000,ko00001,ko01000	-	-	-	PNTB
SX1_k127_2538925_3	1230476.C207_04739	6.308e-135	429.0	COG0479@1|root,COG0479@2|Bacteria,1MVHS@1224|Proteobacteria,2TQYF@28211|Alphaproteobacteria,3JS07@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family	sdhB	-	1.3.5.1,1.3.5.4	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2_3,Fer4_10,Fer4_17,Fer4_8
SX1_k127_2538925_0	1297865.APJD01000019_gene3223	0.0	1752.0	COG1042@1|root,COG1670@1|root,COG1042@2|Bacteria,COG1670@2|Bacteria,1MW98@1224|Proteobacteria,2TR24@28211|Alphaproteobacteria,3JR42@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CJ	ATP-grasp domain	MA20_38090	-	-	ko:K09181	-	-	-	-	ko00000	-	-	-	ATP-grasp_5,Acetyltransf_1,Acetyltransf_3,CoA_binding_2,Succ_CoA_lig
SX1_k127_2538925_2	1297865.APJD01000019_gene3222	0.0	1199.0	COG0370@1|root,COG0370@2|Bacteria,1MUZC@1224|Proteobacteria,2TQSU@28211|Alphaproteobacteria,3JUFP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Ferrous iron transport protein B	feoB	-	-	ko:K04759	-	-	-	-	ko00000,ko02000	9.A.8.1	-	-	FeoB_C,FeoB_N,Gate
SX1_k127_2538925_5	1297865.APJD01000019_gene3221	3.814e-53	187.0	COG1918@1|root,COG1918@2|Bacteria,1N8DT@1224|Proteobacteria,2UFJ3@28211|Alphaproteobacteria,3JZI0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	FeoA	feoA	-	-	ko:K04758	-	-	-	-	ko00000,ko02000	-	-	-	FeoA
SX1_k127_2538925_1	1297865.APJD01000019_gene3220	0.0	1380.0	COG0784@1|root,COG4191@1|root,COG0784@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TQQ9@28211|Alphaproteobacteria,3JTPK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	sensor histidine kinase with a Response regulator receiver domain	-	-	2.7.13.3	ko:K02482	-	-	-	-	ko00000,ko01000,ko01001,ko02022	-	-	-	GAF,GAF_2,HATPase_c,HisKA,PAS_3,PAS_4,PAS_8,PAS_9,Response_reg,dCache_1
SX1_k127_2538925_4	1297865.APJD01000019_gene3219	4.114e-81	272.0	COG0346@1|root,COG0346@2|Bacteria,1RH79@1224|Proteobacteria,2UAPG@28211|Alphaproteobacteria,3JYFP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	MA20_43515	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
SX1_k127_2538925_7	936455.KI421499_gene6488	1.412e-20	98.0	2B022@1|root,31SC8@2|Bacteria,1N3WE@1224|Proteobacteria,2UE22@28211|Alphaproteobacteria,3K0MN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2538925_6	172088.AUGA01000018_gene2121	1.016e-37	146.0	29V13@1|root,30GE8@2|Bacteria,1P8XE@1224|Proteobacteria,2UZ1K@28211|Alphaproteobacteria,3K5K5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2543235_0	1297865.APJD01000020_gene30	1.413e-230	716.0	COG2268@1|root,COG2268@2|Bacteria,1P50K@1224|Proteobacteria,2TTVY@28211|Alphaproteobacteria,3JTXC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Flotillin	MA20_29840	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944	-	ko:K07192	ko04910,map04910	-	-	-	ko00000,ko00001,ko03036,ko04131,ko04147	-	-	-	Band_7,Flot
SX1_k127_2543235_1	1297865.APJD01000020_gene31	2.997e-128	411.0	COG1585@1|root,COG1585@2|Bacteria,1RG29@1224|Proteobacteria,2U37H@28211|Alphaproteobacteria,3JUZA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	OU	Protein of unknown function (DUF1449)	MA20_29845	-	-	-	-	-	-	-	-	-	-	-	DUF1449
SX1_k127_2543235_2	1297865.APJD01000020_gene32	3.541e-25	104.0	COG1842@1|root,COG1842@2|Bacteria,1NB0D@1224|Proteobacteria,2TV06@28211|Alphaproteobacteria,3JVAQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KT	PspA/IM30 family	MA20_29850	-	-	ko:K03969	-	-	-	-	ko00000	-	-	-	PspA_IM30
SX1_k127_2552931_1	1297865.APJD01000033_gene7005	1.12e-293	905.0	COG1680@1|root,COG1680@2|Bacteria,1MY4Y@1224|Proteobacteria,2TYCG@28211|Alphaproteobacteria,3JTS9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SX1_k127_2552931_7	1297865.APJD01000033_gene7004	6.501e-58	203.0	COG5470@1|root,COG5470@2|Bacteria,1N7JA@1224|Proteobacteria,2UBQW@28211|Alphaproteobacteria,3JZZR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF1330)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1330
SX1_k127_2552931_0	1297865.APJD01000033_gene7003	6.914e-298	914.0	COG2079@1|root,COG2079@2|Bacteria,1R5UM@1224|Proteobacteria,2U1F8@28211|Alphaproteobacteria,3JT40@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	MmgE/PrpD family	MA20_23745	-	-	-	-	-	-	-	-	-	-	-	MmgE_PrpD
SX1_k127_2552931_3	1230476.C207_03882	1.963e-219	696.0	COG4129@1|root,COG4129@2|Bacteria,1QUUJ@1224|Proteobacteria,2TUUM@28211|Alphaproteobacteria,3JQNK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Aromatic acid exporter family member 1	MA20_23740	-	-	-	-	-	-	-	-	-	-	-	FUSC,FUSC_2
SX1_k127_2552931_4	1297865.APJD01000033_gene7001	1.534e-141	449.0	COG3917@1|root,COG3917@2|Bacteria,1MV6E@1224|Proteobacteria,2TVJ4@28211|Alphaproteobacteria,3JRC6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	DSBA-like thioredoxin domain	MA20_23730	-	-	-	-	-	-	-	-	-	-	-	DSBA
SX1_k127_2552931_6	1297865.APJD01000033_gene7000	5.554e-89	316.0	2DN0K@1|root,32UR5@2|Bacteria,1RB96@1224|Proteobacteria,2U18W@28211|Alphaproteobacteria,3JZ4S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2867)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2867
SX1_k127_2552931_2	1297865.APJD01000033_gene6999	2.639e-286	882.0	COG0534@1|root,COG0534@2|Bacteria,1MUAM@1224|Proteobacteria,2TSDU@28211|Alphaproteobacteria,3JS8M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	drug transmembrane transport	-	-	-	ko:K03327	-	-	-	-	ko00000,ko02000	2.A.66.1	-	-	MatE
SX1_k127_2552931_5	1230476.C207_03878	6.718e-112	361.0	COG0766@1|root,COG0766@2|Bacteria,1MUH7@1224|Proteobacteria,2TRPH@28211|Alphaproteobacteria,3JVEC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine	murA	-	2.5.1.7	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100	-	R00660	RC00350	ko00000,ko00001,ko01000,ko01011	-	-	-	EPSP_synthase
SX1_k127_2563050_0	1297865.APJD01000005_gene3609	0.0	1068.0	COG0318@1|root,COG0318@2|Bacteria,1MUIC@1224|Proteobacteria,2TRRZ@28211|Alphaproteobacteria,3JTP6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	MA20_16340	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
SX1_k127_2563050_1	1297865.APJD01000005_gene3610	2.485e-94	310.0	COG2352@1|root,COG2352@2|Bacteria,1MUD5@1224|Proteobacteria,2TR6F@28211|Alphaproteobacteria,3JR8U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle	ppc	GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008964,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044444,GO:0044464	4.1.1.31	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	M00168,M00170,M00171,M00172,M00173,M00346,M00374	R00345	RC02741	ko00000,ko00001,ko00002,ko01000	-	-	-	PEPcase
SX1_k127_2566485_8	1297865.APJD01000062_gene3358	9.38e-40	147.0	COG5442@1|root,COG5442@2|Bacteria,1REZ8@1224|Proteobacteria,2U7ES@28211|Alphaproteobacteria,3JYUM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Flagellar protein FlaF	flaF	-	-	ko:K06602	-	-	-	-	ko00000,ko02035	-	-	-	FlaF
SX1_k127_2566485_6	1297865.APJD01000062_gene3359	4.057e-72	244.0	2A71K@1|root,30VWX@2|Bacteria,1N20Z@1224|Proteobacteria,2UDD0@28211|Alphaproteobacteria,3K029@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2566485_3	1297865.APJD01000062_gene3360	3.178e-77	260.0	2EFA0@1|root,3392Y@2|Bacteria,1RD0W@1224|Proteobacteria,2U7TA@28211|Alphaproteobacteria,3JYHC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	FlaG
SX1_k127_2566485_2	1297865.APJD01000062_gene3361	2.332e-95	313.0	2BW5Z@1|root,32QZ3@2|Bacteria,1RDZK@1224|Proteobacteria,2UD61@28211|Alphaproteobacteria,3JYRH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2566485_7	1297865.APJD01000062_gene3362	2.043e-68	239.0	COG3951@1|root,COG3951@2|Bacteria,1N7K5@1224|Proteobacteria,2UFY2@28211|Alphaproteobacteria,3JZX3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	MNO	Rod binding protein	cheL	-	-	-	-	-	-	-	-	-	-	-	Rod-binding
SX1_k127_2566485_0	1230476.C207_00793	3.01e-225	700.0	COG1706@1|root,COG1706@2|Bacteria,1MVKW@1224|Proteobacteria,2TQNX@28211|Alphaproteobacteria,3JTS6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation	flgI	GO:0005575,GO:0005623,GO:0009288,GO:0009425,GO:0042597,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464	-	ko:K02394	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FlgI
SX1_k127_2566485_4	1297865.APJD01000062_gene3364	2.191e-74	256.0	2E5SK@1|root,330GZ@2|Bacteria,1N7R1@1224|Proteobacteria,2UFAX@28211|Alphaproteobacteria,3JY0K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Class II flagellar assembly regulator	fliX	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	FliX
SX1_k127_2566485_5	1297865.APJD01000062_gene3365	1.198e-73	248.0	COG1733@1|root,COG1733@2|Bacteria,1MZ6N@1224|Proteobacteria,2UC19@28211|Alphaproteobacteria,3JYI3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	HxlR-like helix-turn-helix	MA20_08395	-	-	-	-	-	-	-	-	-	-	-	HxlR
SX1_k127_2566485_1	1297865.APJD01000062_gene3366	7.741e-124	398.0	COG2910@1|root,COG2910@2|Bacteria,1MV9B@1224|Proteobacteria,2TRZ3@28211|Alphaproteobacteria,3JTF3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	NmrA-like family	MA20_08400	-	-	ko:K07118	-	-	-	-	ko00000	-	-	-	NAD_binding_10
SX1_k127_2567596_1	1297865.APJD01000026_gene2478	1.113e-210	657.0	COG0111@1|root,COG0111@2|Bacteria,1NU4B@1224|Proteobacteria,2TRM8@28211|Alphaproteobacteria,3JTYB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family	MA20_13185	-	1.1.1.399,1.1.1.95	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R01513	RC00031	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh,2-Hacid_dh_C
SX1_k127_2567596_0	1297865.APJD01000026_gene2477	9.326e-311	954.0	COG0154@1|root,COG0154@2|Bacteria,1MWWQ@1224|Proteobacteria,2TSN9@28211|Alphaproteobacteria,3JS0D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the amidase family	-	-	3.5.1.4	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	-	R02540,R03096,R03180,R03909,R05551,R05590	RC00010,RC00100,RC00950,RC01025	ko00000,ko00001,ko01000	-	-	-	Amidase
SX1_k127_2567596_4	1297865.APJD01000026_gene2476	2.225e-131	420.0	2A6PJ@1|root,30VHG@2|Bacteria,1R9W6@1224|Proteobacteria,2U5KC@28211|Alphaproteobacteria,3JY5T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2567596_2	1297865.APJD01000026_gene2475	3.156e-168	529.0	COG0834@1|root,COG0834@2|Bacteria,1MWDK@1224|Proteobacteria,2TWHY@28211|Alphaproteobacteria,3JQVI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	ET	Bacterial periplasmic substrate-binding proteins	pheC	-	4.2.1.51,4.2.1.91	ko:K01713	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00024	R00691,R01373	RC00360	ko00000,ko00001,ko00002,ko01000	-	-	-	SBP_bac_3
SX1_k127_2567596_5	1297865.APJD01000026_gene2474	5.991e-86	289.0	COG1917@1|root,COG1917@2|Bacteria,1RH1V@1224|Proteobacteria,2U990@28211|Alphaproteobacteria,3JYQR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	AraC-like ligand binding domain	MA20_13155	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
SX1_k127_2567596_3	1297865.APJD01000026_gene2473	2.507e-145	460.0	COG0684@1|root,COG0684@2|Bacteria,1MUWV@1224|Proteobacteria,2TU1X@28211|Alphaproteobacteria,3JUHY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Aldolase/RraA	MA20_13150	-	-	-	-	-	-	-	-	-	-	-	RraA-like
SX1_k127_2571671_0	1297865.APJD01000009_gene2959	0.0	1021.0	COG0477@1|root,COG2814@2|Bacteria,1MU1I@1224|Proteobacteria,2TVXT@28211|Alphaproteobacteria,3JTJC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	MA20_06150	-	-	ko:K03446	-	M00701	-	-	ko00000,ko00002,ko02000	2.A.1.3	-	-	MFS_1
SX1_k127_2571671_2	1297865.APJD01000009_gene2960	5.4e-90	298.0	COG2128@1|root,COG2128@2|Bacteria,1RD1K@1224|Proteobacteria,2U6ZZ@28211|Alphaproteobacteria,3JVNN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	MA20_06155	-	-	-	-	-	-	-	-	-	-	-	CMD
SX1_k127_2571671_1	1297865.APJD01000009_gene2961	3.266e-176	554.0	COG0115@1|root,COG0115@2|Bacteria,1MVAT@1224|Proteobacteria,2TR7R@28211|Alphaproteobacteria,3JSTN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Amino-transferase class IV	dat	-	2.6.1.21	ko:K00824	ko00310,ko00330,ko00360,ko00472,ko00473,ko01100,map00310,map00330,map00360,map00472,map00473,map01100	-	R01148,R01582,R02459,R02851,R02924,R05053	RC00006,RC00008,RC00025	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_4
SX1_k127_2571671_3	398525.KB900701_gene2620	1.102e-70	240.0	COG1126@1|root,COG1126@2|Bacteria,1MU9Q@1224|Proteobacteria,2TQX2@28211|Alphaproteobacteria,3JQQF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ATPases associated with a variety of cellular activities	gltL	-	3.6.3.21	ko:K02028,ko:K10004	ko02010,ko02020,map02010,map02020	M00230,M00236	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.3,3.A.1.3.19,3.A.1.3.4	-	-	ABC_tran
SX1_k127_2581149_3	1297865.APJD01000062_gene3372	1.84e-158	502.0	COG0288@1|root,COG0288@2|Bacteria,1NGFN@1224|Proteobacteria,2TU0G@28211|Alphaproteobacteria,3JSWW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Reversible hydration of carbon dioxide	-	-	4.2.1.1	ko:K01673	ko00910,map00910	-	R00132,R10092	RC02807	ko00000,ko00001,ko01000	-	-	-	Pro_CA
SX1_k127_2581149_2	1297865.APJD01000062_gene3371	1.761e-168	530.0	COG3971@1|root,COG3971@2|Bacteria,1MVVV@1224|Proteobacteria,2TZJ8@28211|Alphaproteobacteria,3JTHJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Fumarylacetoacetate (FAA) hydrolase family	MA20_08420	-	4.1.1.77	ko:K01617	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	M00569	R02602,R05374	RC00751,RC02672	ko00000,ko00001,ko00002,ko01000	-	-	-	FAA_hydrolase
SX1_k127_2581149_0	1297865.APJD01000062_gene3370	1.822e-230	720.0	COG0451@1|root,COG0451@2|Bacteria,1MW32@1224|Proteobacteria,2TTTU@28211|Alphaproteobacteria,3JUH8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	GM	NAD(P)H-binding	-	-	1.1.1.219	ko:K00091	-	-	-	-	ko00000,ko01000	-	-	-	Epimerase
SX1_k127_2581149_4	1297865.APJD01000062_gene3369	1.07e-78	268.0	COG1733@1|root,COG1733@2|Bacteria,1RGDU@1224|Proteobacteria,2U837@28211|Alphaproteobacteria,3JYC6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	HxlR-like helix-turn-helix	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
SX1_k127_2581149_1	1297865.APJD01000062_gene3368	4.642e-183	572.0	2DB9K@1|root,2Z7XA@2|Bacteria,1R4GI@1224|Proteobacteria,2TZ7A@28211|Alphaproteobacteria,3JTVQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Phytanoyl-CoA dioxygenase	-	-	-	-	-	-	-	-	-	-	-	-	PhyH
SX1_k127_2581149_5	316056.RPC_1499	1.22e-74	252.0	COG1734@1|root,COG1734@2|Bacteria,1RD08@1224|Proteobacteria,2U74V@28211|Alphaproteobacteria,3JY09@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters	dksA	-	-	ko:K06204	ko02026,map02026	-	-	-	ko00000,ko00001,ko03000,ko03009,ko03021	-	-	-	zf-dskA_traR
SX1_k127_2581651_1	1297865.APJD01000003_gene6093	2.714e-119	385.0	COG1011@1|root,COG1011@2|Bacteria,1Q69X@1224|Proteobacteria,2TTTP@28211|Alphaproteobacteria,3JTMD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Haloacid dehalogenase-like hydrolase	MA20_23095	-	-	ko:K07025	-	-	-	-	ko00000	-	-	-	HAD_2
SX1_k127_2581651_0	1297865.APJD01000003_gene6094	4.61e-148	470.0	COG2020@1|root,COG2020@2|Bacteria,1RDC4@1224|Proteobacteria,2TUXA@28211|Alphaproteobacteria,3JU1Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Isoprenylcysteine carboxyl methyltransferase (ICMT) family	-	-	-	-	-	-	-	-	-	-	-	-	PEMT
SX1_k127_259649_7	1297865.APJD01000011_gene6851	1.249e-107	353.0	COG0628@1|root,COG0628@2|Bacteria,1MXXU@1224|Proteobacteria,2TVPN@28211|Alphaproteobacteria,3JQWE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	AI-2E family transporter	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
SX1_k127_259649_4	1297865.APJD01000011_gene6852	2.917e-171	540.0	COG1376@1|root,COG1376@2|Bacteria,1MVYT@1224|Proteobacteria,2U60K@28211|Alphaproteobacteria,3JT37@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	L,D-transpeptidase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	YkuD
SX1_k127_259649_6	1297865.APJD01000011_gene6853	9.76e-137	437.0	2CKRE@1|root,34B8D@2|Bacteria,1PM9F@1224|Proteobacteria,2U1FJ@28211|Alphaproteobacteria,3JTCD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2865)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2865
SX1_k127_259649_8	1297865.APJD01000011_gene6854	3.437e-19	88.0	2EUBI@1|root,33MTW@2|Bacteria,1N7F3@1224|Proteobacteria,2UFS4@28211|Alphaproteobacteria,3K0VG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_18250	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_259649_0	1297865.APJD01000011_gene6855	0.0	1453.0	COG2225@1|root,COG2225@2|Bacteria,1MVEV@1224|Proteobacteria,2TS9R@28211|Alphaproteobacteria,3JQN2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA	glcB	GO:0000287,GO:0003674,GO:0003824,GO:0004474,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009436,GO:0009987,GO:0016054,GO:0016740,GO:0016746,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0046395,GO:0046487,GO:0046872,GO:0046912,GO:0071704,GO:0072329,GO:1901575	2.3.3.9	ko:K01638	ko00620,ko00630,ko01100,ko01110,ko01120,ko01200,map00620,map00630,map01100,map01110,map01120,map01200	M00012	R00472	RC00004,RC00308,RC02747	ko00000,ko00001,ko00002,ko01000	-	-	-	Malate_synthase
SX1_k127_259649_2	1297865.APJD01000011_gene6856	2.539e-242	753.0	COG0477@1|root,COG2814@2|Bacteria,1MVD0@1224|Proteobacteria,2TTBC@28211|Alphaproteobacteria,3JXQA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	nepI	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_259649_3	1297865.APJD01000011_gene6857	2.041e-195	619.0	COG2207@1|root,COG2207@2|Bacteria,1N0FA@1224|Proteobacteria,2U2GJ@28211|Alphaproteobacteria,3K5XW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Cupin	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_6,HTH_18
SX1_k127_259649_1	1297865.APJD01000011_gene6858	0.0	1259.0	COG0529@1|root,COG2895@1|root,COG0529@2|Bacteria,COG2895@2|Bacteria,1MUD9@1224|Proteobacteria,2TQNJ@28211|Alphaproteobacteria,3JRFP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Catalyzes the synthesis of activated sulfate	cysC	-	2.7.1.25,2.7.7.4	ko:K00955	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	M00176	R00509,R00529,R04928,R04929	RC00002,RC00078,RC02809,RC02889	ko00000,ko00001,ko00002,ko01000	-	-	-	APS_kinase,GTP_EFTU
SX1_k127_259649_5	1297865.APJD01000011_gene6859	1.229e-139	444.0	COG0175@1|root,COG0175@2|Bacteria,1MUCZ@1224|Proteobacteria,2TT2D@28211|Alphaproteobacteria,3JRFD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	sulfate adenylyltransferase (ATP) activity	cysD	-	2.7.7.4	ko:K00957	ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130	M00176,M00596	R00529,R04929	RC02809,RC02889	ko00000,ko00001,ko00002,ko01000	-	-	-	PAPS_reduct
SX1_k127_2600428_1	1411123.JQNH01000001_gene3622	8.889e-212	662.0	COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,2TS1R@28211|Alphaproteobacteria	28211|Alphaproteobacteria	I	Belongs to the thiolase family	fadA	GO:0003674,GO:0003824,GO:0003988,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0006725,GO:0006805,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016020,GO:0016042,GO:0016054,GO:0016408,GO:0016740,GO:0016746,GO:0016747,GO:0019395,GO:0019439,GO:0019748,GO:0019752,GO:0030258,GO:0030312,GO:0032787,GO:0033554,GO:0033812,GO:0034440,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044464,GO:0046395,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0071944,GO:0072329,GO:0098754,GO:1901360,GO:1901361,GO:1901575	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
SX1_k127_2600428_4	1187851.A33M_2218	4.214e-56	210.0	COG3837@1|root,COG3837@2|Bacteria,1R9WZ@1224|Proteobacteria,2VARS@28211|Alphaproteobacteria,3FEBA@34008|Rhodovulum	28211|Alphaproteobacteria	S	Protein of unknown function (DUF861)	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
SX1_k127_2600428_5	1187851.A33M_2218	1.256e-43	164.0	COG3837@1|root,COG3837@2|Bacteria,1R9WZ@1224|Proteobacteria,2VARS@28211|Alphaproteobacteria,3FEBA@34008|Rhodovulum	28211|Alphaproteobacteria	S	Protein of unknown function (DUF861)	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
SX1_k127_2600428_0	1230476.C207_03098	3.26e-322	1000.0	COG1024@1|root,COG1250@1|root,COG1024@2|Bacteria,COG1250@2|Bacteria,1MU9P@1224|Proteobacteria,2TS8E@28211|Alphaproteobacteria,3JSUZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	enoyl-CoA hydratase isomerase	fadJ	-	1.1.1.35,4.2.1.17,5.1.2.3	ko:K01782	ko00071,ko00280,ko00281,ko00310,ko00362,ko00380,ko00410,ko00640,ko00650,ko00903,ko00930,ko01040,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00071,map00280,map00281,map00310,map00362,map00380,map00410,map00640,map00650,map00903,map00930,map01040,map01100,map01110,map01120,map01130,map01200,map01212	M00032,M00087	R01975,R03026,R03045,R03276,R04137,R04170,R04203,R04204,R04224,R04737,R04738,R04739,R04740,R04741,R04744,R04745,R04746,R04748,R04749,R05066,R05305,R06411,R06412,R06941,R06942,R07935,R07951,R08093,R08094	RC00029,RC00099,RC00117,RC00241,RC00525,RC00831,RC00834,RC00896,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115	ko00000,ko00001,ko00002,ko01000	-	-	-	3HCDH,3HCDH_N,ECH_1
SX1_k127_2600428_2	1410620.SHLA_64c000160	1.094e-164	527.0	COG0477@1|root,COG2814@2|Bacteria,1MXPM@1224|Proteobacteria,2TSB9@28211|Alphaproteobacteria,4B7RA@82115|Rhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
SX1_k127_2600428_3	936455.KI421499_gene7184	5.198e-130	418.0	COG3572@1|root,COG3572@2|Bacteria,1MU47@1224|Proteobacteria,2TRPT@28211|Alphaproteobacteria,3JR2Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	glutamate--cysteine ligase	gshA	-	6.3.2.2	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	M00118	R00894,R10993	RC00064,RC00090	ko00000,ko00001,ko00002,ko01000	-	-	-	GCS2
SX1_k127_2601415_3	1297865.APJD01000002_gene4174	7.048e-70	239.0	2BTW5@1|root,32P40@2|Bacteria,1REN2@1224|Proteobacteria,2U7RX@28211|Alphaproteobacteria,3JYPX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2601415_0	1297865.APJD01000002_gene4175	2.506e-260	803.0	COG3239@1|root,COG3239@2|Bacteria,1MW29@1224|Proteobacteria,2TSHW@28211|Alphaproteobacteria,3JX9Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Fatty acid desaturase	alkB	-	1.14.15.3	ko:K00496	ko00071,ko00930,map00071,map00930	-	R01347,R02281,R06945	RC00478	ko00000,ko00001,ko01000	-	-	-	FA_desaturase
SX1_k127_2601415_1	1297865.APJD01000002_gene4176	9.997e-199	644.0	COG2207@1|root,COG2207@2|Bacteria,1R6AG@1224|Proteobacteria,2U3JP@28211|Alphaproteobacteria,3JVBG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Arabinose-binding domain of AraC transcription regulator, N-term	-	-	-	-	-	-	-	-	-	-	-	-	Arabinose_bd,HTH_18
SX1_k127_2601415_7	1449063.JMLS01000006_gene3612	0.0007619	44.0	2BKI8@1|root,32EZF@2|Bacteria,1TZNM@1239|Firmicutes,4I8XU@91061|Bacilli,270PJ@186822|Paenibacillaceae	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2601415_4	1297865.APJD01000002_gene4178	7.49e-58	203.0	2C9U1@1|root,302JN@2|Bacteria,1NDE1@1224|Proteobacteria,2UHD6@28211|Alphaproteobacteria,3K0ZD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2601415_2	1297865.APJD01000002_gene4179	1.183e-95	316.0	2EHAM@1|root,33B2H@2|Bacteria,1RA0X@1224|Proteobacteria,2U5CB@28211|Alphaproteobacteria,3JYA8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_35685	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2619198_4	1297865.APJD01000032_gene1642	1.835e-84	279.0	COG2021@1|root,COG2021@2|Bacteria,1MVJV@1224|Proteobacteria,2U4YK@28211|Alphaproteobacteria,3JT2R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	alpha/beta hydrolase fold	-	-	2.3.1.31	ko:K00641	ko00270,ko01100,ko01130,map00270,map01100,map01130	-	R01776	RC00004,RC00041	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1
SX1_k127_2619198_1	1297865.APJD01000032_gene1641	2.271e-178	561.0	2A6IJ@1|root,30VC4@2|Bacteria,1R8TN@1224|Proteobacteria,2U572@28211|Alphaproteobacteria,3JVVH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2619198_6	1297865.APJD01000032_gene1640	1.479e-63	218.0	2EJ1T@1|root,33CSZ@2|Bacteria,1N9U4@1224|Proteobacteria,2UDDK@28211|Alphaproteobacteria,3K071@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2619198_7	1297865.APJD01000032_gene1639	2.261e-32	132.0	2AEH8@1|root,314CI@2|Bacteria,1N9UG@1224|Proteobacteria,2UGVW@28211|Alphaproteobacteria,3K1MI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2619198_5	1297865.APJD01000032_gene1638	3.568e-68	233.0	2BTE0@1|root,32NK2@2|Bacteria,1RDEG@1224|Proteobacteria,2U772@28211|Alphaproteobacteria,3JYX2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2619198_2	1297865.APJD01000032_gene1637	2.28e-102	333.0	COG3153@1|root,COG3153@2|Bacteria,1RA42@1224|Proteobacteria,2UA4N@28211|Alphaproteobacteria,3JZT9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Acetyltransferase (GNAT) domain	-	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006473,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564	-	ko:K03824	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_1,Acetyltransf_7,Acetyltransf_9
SX1_k127_2619198_3	1297865.APJD01000032_gene1636	5.057e-85	297.0	COG0748@1|root,COG0748@2|Bacteria,1RBVH@1224|Proteobacteria,2U6I3@28211|Alphaproteobacteria,3JY7V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Pyridoxamine 5'-phosphate oxidase	-	-	-	-	-	-	-	-	-	-	-	-	Putative_PNPOx
SX1_k127_2619198_0	1297865.APJD01000032_gene1635	0.0	1555.0	COG0556@1|root,COG0556@2|Bacteria,1MUFK@1224|Proteobacteria,2TQSP@28211|Alphaproteobacteria,3JR4I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage	uvrB	-	-	ko:K03702	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	Helicase_C,ResIII,UVR,UvrB
SX1_k127_2636228_1	172088.AUGA01000052_gene2753	3.978e-26	113.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JU8M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	mdtC	-	-	ko:K07789	ko02020,map02020	M00648	-	-	ko00000,ko00001,ko00002,ko02000	2.A.6.2	-	-	ACR_tran
SX1_k127_2636228_0	1297865.APJD01000020_gene322	0.0	1948.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JSVA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	mdtB	-	-	ko:K07788	ko02020,map02020	M00648	-	-	ko00000,ko00001,ko00002,ko02000	2.A.6.2	-	-	ACR_tran
SX1_k127_2648576_1	1297865.APJD01000020_gene184	1.711e-197	616.0	COG1129@1|root,COG1129@2|Bacteria,1MU22@1224|Proteobacteria,2TQJV@28211|Alphaproteobacteria,3JS9B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	MA20_37375	-	3.6.3.17	ko:K10441	ko02010,map02010	M00212	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	ABC_tran
SX1_k127_2648576_0	398525.KB900701_gene5233	1.511e-209	651.0	COG1879@1|root,COG1879@2|Bacteria,1NRXG@1224|Proteobacteria,2TW5I@28211|Alphaproteobacteria,3JTWN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Periplasmic binding proteins and sugar binding domain of LacI family	MA20_37380	-	-	ko:K10439	ko02010,ko02030,map02010,map02030	M00212	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	Peripla_BP_4
SX1_k127_2652447_5	398525.KB900701_gene5502	1.335e-11	64.0	COG2271@1|root,COG2271@2|Bacteria,1MX4V@1224|Proteobacteria,2U6FF@28211|Alphaproteobacteria,3JWSX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	uhpC	-	-	ko:K02445	-	-	-	-	ko00000,ko02000	2.A.1.4.3	-	-	MFS_1
SX1_k127_2652447_0	1297865.APJD01000010_gene4866	1.984e-318	977.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TTJP@28211|Alphaproteobacteria,3JVFJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde dehydrogenase family	phnY	-	-	-	-	-	-	-	-	-	-	-	Aldedh
SX1_k127_2652447_1	1297865.APJD01000010_gene4865	1.917e-275	848.0	COG1524@1|root,COG1524@2|Bacteria,1N5SF@1224|Proteobacteria,2TU7V@28211|Alphaproteobacteria,3JXCK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Type I phosphodiesterase / nucleotide pyrophosphatase	phnA	-	3.11.1.2	ko:K19670	ko00440,map00440	-	R00318	RC01309	ko00000,ko00001,ko01000	-	-	-	Phosphodiest
SX1_k127_2652447_2	1297865.APJD01000010_gene4864	1.411e-241	748.0	COG1454@1|root,COG1454@2|Bacteria,1MVPH@1224|Proteobacteria,2U2T4@28211|Alphaproteobacteria,3JX5Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Iron-containing alcohol dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Fe-ADH
SX1_k127_2652447_3	1297865.APJD01000010_gene4863	1.358e-188	595.0	COG0583@1|root,COG0583@2|Bacteria,1MWVU@1224|Proteobacteria,2U1KV@28211|Alphaproteobacteria,3JWZH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_2652447_4	1230476.C207_06022	1.804e-29	120.0	2ANRX@1|root,31DRT@2|Bacteria,1N3Q5@1224|Proteobacteria,2UCSQ@28211|Alphaproteobacteria,3K0GR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2661510_8	316055.RPE_2185	2.725e-124	406.0	COG0560@1|root,COG0560@2|Bacteria,1MWA3@1224|Proteobacteria,2TSEU@28211|Alphaproteobacteria,3JSAV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	phosphoserine phosphatase	serB	-	3.1.3.3	ko:K01079	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R00582	RC00017	ko00000,ko00001,ko00002,ko01000,ko01009	-	-	-	HAD
SX1_k127_2661510_5	1297865.APJD01000006_gene4642	1.231e-191	608.0	COG0324@1|root,COG0324@2|Bacteria,1MUB2@1224|Proteobacteria,2TR8Z@28211|Alphaproteobacteria,3JT2U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)	miaA	GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.5.1.75	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110	-	R01122	RC02820	ko00000,ko00001,ko01000,ko01006,ko03016	-	-	-	IPPT
SX1_k127_2661510_0	1297865.APJD01000006_gene4643	0.0	1218.0	COG0028@1|root,COG0028@2|Bacteria,1MU6U@1224|Proteobacteria,2TR1I@28211|Alphaproteobacteria,3JR67@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Acetolactate synthase	ilvI	-	2.2.1.6	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R00006,R00014,R00226,R03050,R04672,R04673,R08648	RC00027,RC00106,RC01192,RC02744,RC02893	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
SX1_k127_2661510_4	1297865.APJD01000006_gene4644	3.409e-207	647.0	COG1171@1|root,COG1171@2|Bacteria,1MVWJ@1224|Proteobacteria,2TUWV@28211|Alphaproteobacteria,3JTKA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Pyridoxal-phosphate dependent enzyme	MA20_02330	-	4.3.1.19	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	M00570	R00220,R00996	RC00418,RC02600	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
SX1_k127_2661510_10	1297865.APJD01000006_gene4645	7.187e-110	356.0	COG0440@1|root,COG0440@2|Bacteria,1RAGN@1224|Proteobacteria,2U5CW@28211|Alphaproteobacteria,3JS41@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Acetolactate synthase small subunit	ilvH	-	2.2.1.6	ko:K01653	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R00006,R00014,R00226,R03050,R04672,R04673,R08648	RC00027,RC00106,RC01192,RC02744,RC02893	ko00000,ko00001,ko00002,ko01000	-	-	-	ACT,ACT_5,ALS_ss_C
SX1_k127_2661510_7	1297865.APJD01000006_gene4646	2.853e-151	478.0	COG0500@1|root,COG2226@2|Bacteria,1QAQK@1224|Proteobacteria,2TVNQ@28211|Alphaproteobacteria,3JSNH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Ribosomal protein L11 methyltransferase (PrmA)	MA20_02340	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25
SX1_k127_2661510_6	1297865.APJD01000006_gene4647	2.876e-184	577.0	COG0697@1|root,COG0697@2|Bacteria,1MVKG@1224|Proteobacteria,2TVQG@28211|Alphaproteobacteria,3JSBX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	eamA	-	-	ko:K15268	-	-	-	-	ko00000,ko02000	2.A.7.3.2	-	-	EamA
SX1_k127_2661510_9	1297865.APJD01000006_gene4648	4.519e-123	396.0	COG1280@1|root,COG1280@2|Bacteria,1RET0@1224|Proteobacteria,2TT5R@28211|Alphaproteobacteria,3JTB9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	LysE type translocator	eamB	-	-	-	-	-	-	-	-	-	-	-	LysE
SX1_k127_2661510_2	1297865.APJD01000006_gene4649	1.132e-220	685.0	COG0059@1|root,COG0059@2|Bacteria,1MV7M@1224|Proteobacteria,2TRXI@28211|Alphaproteobacteria,3JT4K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate	ilvC	-	1.1.1.86	ko:K00053	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R03051,R04439,R04440,R05068,R05069,R05071	RC00726,RC00836,RC00837,RC01726	ko00000,ko00001,ko00002,ko01000	-	-	-	IlvC,IlvN
SX1_k127_2661510_1	1297865.APJD01000006_gene4650	1.046e-227	707.0	COG5330@1|root,COG5330@2|Bacteria,1R3VY@1224|Proteobacteria,2TUGG@28211|Alphaproteobacteria,3JUE9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterised protein conserved in bacteria (DUF2336)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2336
SX1_k127_2661510_3	1297865.APJD01000006_gene4651	1.23e-210	657.0	COG2114@1|root,COG2114@2|Bacteria,1MVZU@1224|Proteobacteria,2U128@28211|Alphaproteobacteria,3JT5W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylyl- / guanylyl cyclase, catalytic domain	cyaB	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
SX1_k127_2661510_11	1297865.APJD01000006_gene4652	2.77e-25	106.0	COG3755@1|root,COG3755@2|Bacteria,1N9U0@1224|Proteobacteria,2UGIB@28211|Alphaproteobacteria,3K1JB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Lysozyme inhibitor LprI	-	-	-	-	-	-	-	-	-	-	-	-	LprI
SX1_k127_2674077_7	1297865.APJD01000007_gene2025	1.483e-107	348.0	COG4122@1|root,COG4122@2|Bacteria,1N57D@1224|Proteobacteria,2TT8Y@28211|Alphaproteobacteria,3JTNU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	O-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_24,Methyltransf_3
SX1_k127_2674077_3	1297865.APJD01000007_gene2024	2.447e-272	839.0	COG3182@1|root,COG3182@2|Bacteria,1QWJM@1224|Proteobacteria,2TWZQ@28211|Alphaproteobacteria,3JV5H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PepSY-associated TM region	-	-	1.8.1.2	ko:K00380	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00176	R00858	RC00065	ko00000,ko00001,ko00002,ko01000	-	-	-	PepSY_TM
SX1_k127_2674077_6	1297865.APJD01000007_gene2023	8.67e-113	364.0	COG0537@1|root,COG0537@2|Bacteria,1N78Q@1224|Proteobacteria,2UA34@28211|Alphaproteobacteria,3JVP0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	FG	Domain of unknown function (DUF4269)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4269
SX1_k127_2674077_0	1297865.APJD01000007_gene2022	0.0	1120.0	COG2224@1|root,COG2224@2|Bacteria,1MWIF@1224|Proteobacteria,2TU0Q@28211|Alphaproteobacteria,3JTR3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Isocitrate lyase	aceA	-	4.1.3.1	ko:K01637	ko00630,ko01100,ko01110,ko01120,ko01200,map00630,map01100,map01110,map01120,map01200	M00012	R00479	RC00311,RC00313	ko00000,ko00001,ko00002,ko01000	-	-	-	ICL
SX1_k127_2674077_1	1230476.C207_00436	8.944e-310	949.0	COG1396@1|root,COG3800@1|root,COG1396@2|Bacteria,COG3800@2|Bacteria,1MU50@1224|Proteobacteria,2TRKE@28211|Alphaproteobacteria,3JWY3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Predicted transcriptional regulator (DUF2083)	-	-	-	ko:K07110	-	-	-	-	ko00000,ko03000	-	-	-	DUF2083,HTH_19,HTH_3,HTH_31,Peptidase_M78
SX1_k127_2674077_4	1297865.APJD01000007_gene2020	6.614e-269	828.0	COG0111@1|root,COG0111@2|Bacteria,1MU5Z@1224|Proteobacteria,2TR0F@28211|Alphaproteobacteria,3JRRC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain	MA20_21575	GO:0003674,GO:0003824,GO:0004617,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016491,GO:0016597,GO:0016614,GO:0016616,GO:0019752,GO:0031406,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0047545,GO:0055114,GO:0070905,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.1.1.399,1.1.1.95	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R01513	RC00031	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh,2-Hacid_dh_C,HAD
SX1_k127_2674077_5	1297865.APJD01000007_gene2019	1.533e-205	642.0	COG0009@1|root,COG0009@2|Bacteria,1MVPM@1224|Proteobacteria,2TRIM@28211|Alphaproteobacteria,3JU6E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine	sua5	GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363	2.7.7.87	ko:K07566	-	-	R10463	RC00745	ko00000,ko01000,ko03009,ko03016	-	-	-	SUA5,Sua5_yciO_yrdC
SX1_k127_2674077_2	1297865.APJD01000007_gene2018	1.098e-304	936.0	COG0277@1|root,COG0277@2|Bacteria,1MU6Y@1224|Proteobacteria,2TRYI@28211|Alphaproteobacteria,3JT3S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	FAD linked oxidases, C-terminal domain	MA20_42035	GO:0000166,GO:0003674,GO:0003824,GO:0004457,GO:0004458,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006089,GO:0006091,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016053,GO:0016491,GO:0016614,GO:0016898,GO:0019249,GO:0019516,GO:0019752,GO:0022900,GO:0022904,GO:0030447,GO:0032787,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046394,GO:0048037,GO:0050660,GO:0050662,GO:0051990,GO:0055114,GO:0071704,GO:0071949,GO:0072330,GO:0097159,GO:0099615,GO:1901265,GO:1901363,GO:1901576,GO:1901615,GO:1901617	1.1.2.4	ko:K00102	ko00620,map00620	-	R00197	RC00044	ko00000,ko00001,ko01000	-	-	-	FAD-oxidase_C,FAD_binding_4
SX1_k127_2674077_8	1297865.APJD01000007_gene2017	1.446e-17	83.0	COG0454@1|root,COG0456@2|Bacteria,1RA6D@1224|Proteobacteria,2UC27@28211|Alphaproteobacteria,3JYBK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
SX1_k127_2678946_7	1297865.APJD01000006_gene4603	1.658e-12	66.0	COG3975@1|root,COG3975@2|Bacteria,1N69B@1224|Proteobacteria,2U0ZK@28211|Alphaproteobacteria,3JS81@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2678946_1	1297865.APJD01000006_gene4602	0.0	1079.0	COG0659@1|root,COG0659@2|Bacteria,1MWDF@1224|Proteobacteria,2TT0G@28211|Alphaproteobacteria,3JV4A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Permease family	-	-	-	-	-	-	-	-	-	-	-	-	STAS,Sulfate_transp
SX1_k127_2678946_5	1297865.APJD01000006_gene4601	1.492e-76	257.0	2A993@1|root,30YDZ@2|Bacteria,1RIG9@1224|Proteobacteria,2U7MX@28211|Alphaproteobacteria,3JZST@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2678946_2	1297865.APJD01000006_gene4600	6.892e-315	965.0	COG0277@1|root,COG0277@2|Bacteria,1MU6Y@1224|Proteobacteria,2TR2Z@28211|Alphaproteobacteria,3JS63@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	FAD linked oxidases, C-terminal domain	dld	GO:0003674,GO:0003824,GO:0004457,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008720,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019866,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0034641,GO:0034654,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046034,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	1.1.1.303,1.1.1.4,1.1.2.4	ko:K00004,ko:K00102	ko00620,ko00650,map00620,map00650	-	R00197,R02855,R02946,R10504	RC00044,RC00205,RC00525	ko00000,ko00001,ko01000	-	-	-	FAD-oxidase_C,FAD_binding_4
SX1_k127_2678946_3	1297865.APJD01000006_gene4599	8.157e-109	353.0	COG0824@1|root,COG0824@2|Bacteria,1MZB3@1224|Proteobacteria,2U7CU@28211|Alphaproteobacteria,3JW3M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Thioesterase-like superfamily	-	-	-	ko:K07107	-	-	-	-	ko00000,ko01000	-	-	-	4HBT_2
SX1_k127_2678946_6	1297865.APJD01000006_gene4598	7.556e-23	102.0	COG5487@1|root,COG5487@2|Bacteria,1NGAH@1224|Proteobacteria,2UJIU@28211|Alphaproteobacteria,3K0ZQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	UPF0391 membrane protein	MA20_02060	-	-	-	-	-	-	-	-	-	-	-	DUF1328
SX1_k127_2678946_0	1297865.APJD01000006_gene4597	0.0	1666.0	COG0210@1|root,COG0210@2|Bacteria,1MU0G@1224|Proteobacteria,2TS2B@28211|Alphaproteobacteria,3JQMS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	UvrD-like helicase C-terminal domain	uvrD	-	3.6.4.12	ko:K03657	ko03420,ko03430,map03420,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	UvrD-helicase,UvrD_C
SX1_k127_2678946_4	1297865.APJD01000006_gene4596	9.692e-77	257.0	2CK9Y@1|root,32SBX@2|Bacteria,1N68N@1224|Proteobacteria,2UD35@28211|Alphaproteobacteria,3JY92@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_02045	-	-	-	-	-	-	-	-	-	-	-	Cys_rich_FGFR
SX1_k127_2685648_2	1297865.APJD01000009_gene2800	6.687e-99	323.0	COG1825@1|root,COG1825@2|Bacteria,1RDH0@1224|Proteobacteria,2U5P0@28211|Alphaproteobacteria,3JSHR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance	ctc	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02897	ko03010,map03010	M00178	-	-	ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L25p,Ribosomal_TL5_C
SX1_k127_2685648_1	1230476.C207_03555	1.127e-129	418.0	COG0193@1|root,COG0193@2|Bacteria,1MX1P@1224|Proteobacteria,2TT6Q@28211|Alphaproteobacteria,3JSPW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis	pth	GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101	3.1.1.29	ko:K01056	-	-	-	-	ko00000,ko01000,ko03012	-	-	-	Pept_tRNA_hydro
SX1_k127_2685648_0	1297865.APJD01000009_gene2798	2.551e-230	716.0	COG0012@1|root,COG0012@2|Bacteria,1MVM4@1224|Proteobacteria,2TRAD@28211|Alphaproteobacteria,3JRUC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner	ychF	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0044424,GO:0044464	-	ko:K06942	-	-	-	-	ko00000,ko03009	-	-	-	MMR_HSR1,YchF-GTPase_C
SX1_k127_2691164_1	1297865.APJD01000035_gene5474	4.261e-270	832.0	COG0683@1|root,COG0683@2|Bacteria,1MU4V@1224|Proteobacteria,2TV7X@28211|Alphaproteobacteria,3JQUF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_2691164_2	1297865.APJD01000035_gene5473	3.592e-100	326.0	COG5470@1|root,COG5470@2|Bacteria,1MWI7@1224|Proteobacteria,2U0S6@28211|Alphaproteobacteria,3JYCC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF1330)	MA20_23360	-	-	-	-	-	-	-	-	-	-	-	DUF1330
SX1_k127_2691164_0	1297865.APJD01000035_gene5472	4.168e-284	874.0	COG0744@1|root,COG0744@2|Bacteria,1QTST@1224|Proteobacteria,2TQQ8@28211|Alphaproteobacteria,3JR5K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Penicillin-binding Protein	pbpC	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly,Transpeptidase
SX1_k127_2694530_6	1297865.APJD01000013_gene1285	5.868e-103	335.0	COG4177@1|root,COG4177@2|Bacteria,1N5I8@1224|Proteobacteria,2U0PT@28211|Alphaproteobacteria,3JSC7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	MA20_14915	-	-	ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_2694530_4	1297865.APJD01000013_gene1284	2.752e-153	494.0	COG0411@1|root,COG0411@2|Bacteria,1MX51@1224|Proteobacteria,2VEYC@28211|Alphaproteobacteria,3JVET@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	AAA domain	MA20_14910	-	-	ko:K01995	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_2694530_5	1297865.APJD01000013_gene1283	7.224e-151	477.0	COG0410@1|root,COG0410@2|Bacteria,1MUR3@1224|Proteobacteria,2TSWQ@28211|Alphaproteobacteria,3JUT4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ATPases associated with a variety of cellular activities	MA20_14905	-	-	ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran
SX1_k127_2694530_1	1297865.APJD01000013_gene1282	8.169e-266	818.0	COG1804@1|root,COG1804@2|Bacteria,1QNB4@1224|Proteobacteria,2TS7Q@28211|Alphaproteobacteria,3JWMB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA-transferase family III	-	-	-	-	-	-	-	-	-	-	-	-	CoA_transf_3
SX1_k127_2694530_3	1297865.APJD01000013_gene1281	2.644e-160	507.0	COG1024@1|root,COG1024@2|Bacteria,1MWVY@1224|Proteobacteria,2TRWX@28211|Alphaproteobacteria,3JVIC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	-	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_2694530_7	1297865.APJD01000013_gene1280	7.175e-98	319.0	COG2030@1|root,COG2030@2|Bacteria,1MW4N@1224|Proteobacteria,2U7FW@28211|Alphaproteobacteria,3K66C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	MaoC like domain	-	-	-	-	-	-	-	-	-	-	-	-	MaoC_dehydratas
SX1_k127_2694530_2	1297865.APJD01000013_gene1279	2.158e-178	559.0	COG2301@1|root,COG2301@2|Bacteria,1MW0A@1224|Proteobacteria,2TTC0@28211|Alphaproteobacteria,3JVWX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Belongs to the HpcH HpaI aldolase family	MA20_00770	-	4.1.3.34	ko:K01644	ko02020,map02020	-	R00362	RC00067,RC01118	ko00000,ko00001,ko01000	-	-	-	HpcH_HpaI
SX1_k127_2694530_0	1297865.APJD01000013_gene1278	7.326e-272	842.0	COG1804@1|root,COG1804@2|Bacteria,1MVY1@1224|Proteobacteria,2TVJ9@28211|Alphaproteobacteria,3JVVG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA-transferase family III	-	-	-	-	-	-	-	-	-	-	-	-	CoA_transf_3
SX1_k127_2694530_8	1297865.APJD01000013_gene1277	2.901e-64	220.0	COG1638@1|root,COG1638@2|Bacteria,1MVHI@1224|Proteobacteria,2TTYB@28211|Alphaproteobacteria,3JWG6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Bacterial extracellular solute-binding protein, family 7	-	-	-	-	-	-	-	-	-	-	-	-	DctP
SX1_k127_269998_14	1297865.APJD01000026_gene2515	1.712e-94	314.0	COG1593@1|root,COG3090@1|root,COG1593@2|Bacteria,COG3090@2|Bacteria,1MU0F@1224|Proteobacteria,2TSEZ@28211|Alphaproteobacteria,3JSEF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Tripartite ATP-independent periplasmic transporters, DctQ component	MA20_29425	-	-	-	-	-	-	-	-	-	-	-	DctM,DctQ
SX1_k127_269998_6	1230476.C207_01045	7.664e-223	691.0	COG1638@1|root,COG1638@2|Bacteria,1MWXG@1224|Proteobacteria,2U10G@28211|Alphaproteobacteria,3JSRE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Bacterial extracellular solute-binding protein, family 7	MA20_29430	-	-	-	-	-	-	-	-	-	-	-	DctP
SX1_k127_269998_5	1297865.APJD01000026_gene2517	2.573e-226	704.0	COG3684@1|root,COG3684@2|Bacteria,1QZI3@1224|Proteobacteria,2U07T@28211|Alphaproteobacteria,3JRZZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	DeoC/LacD family aldolase	MA20_09915	-	4.1.2.40,4.1.2.57	ko:K01635,ko:K01671	ko00052,ko01100,ko02024,map00052,map01100,map02024	-	R01069,R10760	RC00438,RC00439	ko00000,ko00001,ko01000	-	-	-	DeoC
SX1_k127_269998_9	1297865.APJD01000026_gene2518	1.623e-200	632.0	COG0524@1|root,COG0524@2|Bacteria,1MWX4@1224|Proteobacteria,2VF16@28211|Alphaproteobacteria,3JV89@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Belongs to the carbohydrate kinase PfkB family	-	-	2.7.1.184	ko:K18478	-	-	R10970	RC00002,RC00017	ko00000,ko01000	-	-	-	PfkB
SX1_k127_269998_4	1297865.APJD01000026_gene2519	8.164e-231	715.0	COG3842@1|root,COG3842@2|Bacteria,1MU3I@1224|Proteobacteria,2TQQJ@28211|Alphaproteobacteria,3JSZ1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	TOBE domain	-	-	-	ko:K10112	ko02010,map02010	M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00491,M00602,M00605,M00606	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1	-	-	ABC_tran,TOBE,TOBE_2
SX1_k127_269998_8	1297865.APJD01000026_gene2520	7.506e-217	673.0	COG1063@1|root,COG1063@2|Bacteria,1MWX0@1224|Proteobacteria,2TU6B@28211|Alphaproteobacteria,3JQMN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Alcohol dehydrogenase GroES-like domain	-	-	1.1.1.14	ko:K00008	ko00040,ko00051,ko01100,map00040,map00051,map01100	M00014	R00875,R01896	RC00085,RC00102	ko00000,ko00001,ko00002,ko01000	-	-	-	ADH_N,ADH_zinc_N
SX1_k127_269998_11	1297865.APJD01000026_gene2521	5.591e-169	533.0	COG0395@1|root,COG0395@2|Bacteria,1MXTE@1224|Proteobacteria,2U09S@28211|Alphaproteobacteria,3JU5C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02026	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	BPD_transp_1
SX1_k127_269998_10	1297865.APJD01000026_gene2522	2.716e-185	581.0	COG1175@1|root,COG1175@2|Bacteria,1MWB7@1224|Proteobacteria,2TQZY@28211|Alphaproteobacteria,3JSZ8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02025	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	BPD_transp_1
SX1_k127_269998_0	1297865.APJD01000026_gene2523	8.705e-283	870.0	COG1653@1|root,COG1653@2|Bacteria,1MUNZ@1224|Proteobacteria,2U05K@28211|Alphaproteobacteria,3JWRT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Bacterial extracellular solute-binding protein	-	-	-	ko:K02027	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	SBP_bac_1,SBP_bac_8
SX1_k127_269998_7	1297865.APJD01000026_gene2524	1.557e-221	689.0	COG1609@1|root,COG1609@2|Bacteria,1MVUR@1224|Proteobacteria,2TUPD@28211|Alphaproteobacteria,3JRS8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn _helix lactose operon repressor	-	-	-	ko:K02529,ko:K06145	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_3
SX1_k127_269998_12	1297865.APJD01000026_gene2525	1.086e-149	474.0	COG1028@1|root,COG1028@2|Bacteria,1MXQR@1224|Proteobacteria,2TW65@28211|Alphaproteobacteria,3JVTV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	NAD dependent epimerase/dehydratase family	MA20_09905	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_269998_2	1297865.APJD01000026_gene2526	9.643e-248	765.0	COG1804@1|root,COG1804@2|Bacteria,1MW1H@1224|Proteobacteria,2TR7D@28211|Alphaproteobacteria,3JUQ6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA-transferase family III	-	-	5.1.99.4	ko:K01796	ko00120,ko01100,ko04146,map00120,map01100,map04146	M00104	R08734,R08739	RC02345	ko00000,ko00001,ko00002,ko01000	-	-	-	CoA_transf_3
SX1_k127_269998_13	1297865.APJD01000026_gene2527	1.522e-144	462.0	COG0778@1|root,COG0778@2|Bacteria,1PG8V@1224|Proteobacteria,2U6HW@28211|Alphaproteobacteria,3K3RV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Nitroreductase family	-	-	-	-	-	-	-	-	-	-	-	-	Nitroreductase
SX1_k127_269998_3	1297865.APJD01000026_gene2528	8.39e-237	735.0	COG3173@1|root,COG3173@2|Bacteria,1MWAK@1224|Proteobacteria,2TT2N@28211|Alphaproteobacteria,3JV5A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Ecdysteroid kinase	-	-	-	-	-	-	-	-	-	-	-	-	APH
SX1_k127_269998_1	1297865.APJD01000026_gene2529	1.54e-278	856.0	COG1960@1|root,COG1960@2|Bacteria,1MWUU@1224|Proteobacteria,2TT47@28211|Alphaproteobacteria,3K2GR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_269998_15	1297865.APJD01000026_gene2530	3.334e-76	256.0	COG1028@1|root,COG1028@2|Bacteria,1MW9A@1224|Proteobacteria,2TRDT@28211|Alphaproteobacteria,3JS08@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
SX1_k127_2715146_0	1297865.APJD01000005_gene3515	7.885e-285	880.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JRYN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	MA20_16805	-	-	ko:K18138,ko:K18307	ko01501,ko01503,ko02024,map01501,map01503,map02024	M00644,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	2.A.6.2,2.A.6.2.20,2.A.6.2.32	-	-	ACR_tran
SX1_k127_2715146_1	1297865.APJD01000005_gene3514	1.016e-61	213.0	COG0845@1|root,COG0845@2|Bacteria,1MUFW@1224|Proteobacteria,2U2CU@28211|Alphaproteobacteria,3JQRQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	MA20_16810	-	-	ko:K18306	ko02024,map02024	M00644	-	-	ko00000,ko00001,ko00002,ko02000	2.A.6.2.20,2.A.6.2.32,8.A.1	-	-	HlyD_D23
SX1_k127_271528_0	1297865.APJD01000014_gene497	1.074e-285	878.0	COG0488@1|root,COG0488@2|Bacteria,1MU37@1224|Proteobacteria,2TR3X@28211|Alphaproteobacteria,3JTPC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	ABC transporter C-terminal domain	uup	GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010528,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031323,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0070894,GO:0071944,GO:0080090,GO:0097159,GO:1901363	-	ko:K15738	-	-	-	-	ko00000,ko02000	3.A.1.120.6	-	-	ABC_tran,ABC_tran_CTD
SX1_k127_271528_1	1297865.APJD01000014_gene498	9.8e-246	759.0	COG3616@1|root,COG3616@2|Bacteria,1MVQE@1224|Proteobacteria,2TSQ3@28211|Alphaproteobacteria,3JSXI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Putative serine dehydratase domain	MA20_27460	-	-	-	-	-	-	-	-	-	-	-	Ala_racemase_N,D-ser_dehydrat
SX1_k127_271528_2	1297865.APJD01000014_gene499	1.542e-190	595.0	COG0583@1|root,COG0583@2|Bacteria,1R55T@1224|Proteobacteria,2U1HT@28211|Alphaproteobacteria,3JRZS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_271528_3	1297865.APJD01000014_gene500	4.44e-47	171.0	COG0477@1|root,COG2814@2|Bacteria,1MVVW@1224|Proteobacteria,2TVQU@28211|Alphaproteobacteria,3JVZP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_272070_2	1297865.APJD01000015_gene3471	1.11e-49	178.0	COG4221@1|root,COG4221@2|Bacteria,1MW86@1224|Proteobacteria,2TSEM@28211|Alphaproteobacteria,3JWSJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_272070_0	1297865.APJD01000015_gene3472	1.648e-207	646.0	COG1893@1|root,COG1893@2|Bacteria,1MVZ1@1224|Proteobacteria,2TRJN@28211|Alphaproteobacteria,3JS2F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Ketopantoate reductase PanE/ApbA C terminal	MA20_40170	-	1.1.1.169	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	M00119	R02472	RC00726	ko00000,ko00001,ko00002,ko01000	-	-	-	ApbA,ApbA_C
SX1_k127_272070_1	1297865.APJD01000015_gene3473	2.215e-167	527.0	COG1024@1|root,COG1024@2|Bacteria,1MVEC@1224|Proteobacteria,2TRPS@28211|Alphaproteobacteria,3JREH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	MA20_40175	-	4.2.1.18,4.2.1.57	ko:K13766,ko:K13779	ko00280,ko00281,ko01100,map00280,map00281,map01100	M00036	R02085,R03493	RC00941,RC02416	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
SX1_k127_272070_3	1297865.APJD01000015_gene3474	2.373e-45	166.0	2ADZV@1|root,313SE@2|Bacteria,1N23K@1224|Proteobacteria,2UCQC@28211|Alphaproteobacteria,3K0N5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2733359_1	1297865.APJD01000004_gene5379	1.352e-228	709.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JS7F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Efflux pump membrane transporter	MA20_18040	-	-	ko:K18138,ko:K18146	ko01501,ko01503,map01501,map01503	M00647,M00649,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	2.A.6.2,2.A.6.2.40	-	-	ACR_tran
SX1_k127_2733359_0	1297865.APJD01000004_gene5378	6.187e-248	766.0	COG4637@1|root,COG4637@2|Bacteria,1ND40@1224|Proteobacteria,2TTJW@28211|Alphaproteobacteria,3JW27@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	AAA domain, putative AbiEii toxin, Type IV TA system	-	-	-	-	-	-	-	-	-	-	-	-	AAA_15,AAA_21
SX1_k127_2733359_3	1297865.APJD01000004_gene5377	1.153e-171	540.0	COG0483@1|root,COG0483@2|Bacteria,1MUQT@1224|Proteobacteria,2TR06@28211|Alphaproteobacteria,3JS0C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Inositol monophosphatase	suhB	-	3.1.3.25	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	M00131	R01185,R01186,R01187	RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	Inositol_P
SX1_k127_2733359_2	1297865.APJD01000004_gene5376	8.908e-213	668.0	COG0790@1|root,COG0790@2|Bacteria,1MWPA@1224|Proteobacteria,2TR2B@28211|Alphaproteobacteria,3JRKY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sel1-like repeats.	-	-	-	ko:K07126	-	-	-	-	ko00000	-	-	-	Sel1
SX1_k127_2733359_4	1297865.APJD01000004_gene5375	1.769e-58	203.0	COG0352@1|root,COG0352@2|Bacteria,1MV42@1224|Proteobacteria,2TSSA@28211|Alphaproteobacteria,3JS4M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Thiamine monophosphate synthase	thiE	-	2.5.1.3	ko:K00788	ko00730,ko01100,map00730,map01100	M00127	R03223,R10712	RC00224,RC03255,RC03397	ko00000,ko00001,ko00002,ko01000	-	-	-	TMP-TENI
SX1_k127_2738901_0	1297865.APJD01000047_gene4778	0.0	1051.0	COG3170@1|root,COG3170@2|Bacteria,1QW8W@1224|Proteobacteria,2TWTD@28211|Alphaproteobacteria,3K6P5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	Apolipoprotein A1/A4/E domain	-	-	-	-	-	-	-	-	-	-	-	-	Apolipoprotein
SX1_k127_2738901_3	1297865.APJD01000047_gene4777	6.268e-70	238.0	COG2198@1|root,COG2198@2|Bacteria,1RI91@1224|Proteobacteria,2UDSX@28211|Alphaproteobacteria,3K0NW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Histidine Phosphotransfer domain	-	-	-	-	-	-	-	-	-	-	-	-	Hpt
SX1_k127_2738901_4	1297865.APJD01000047_gene4776	1.962e-64	224.0	COG0633@1|root,COG0633@2|Bacteria,1RHDC@1224|Proteobacteria,2U97J@28211|Alphaproteobacteria,3JYP7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	2Fe-2S iron-sulfur cluster binding domain	fdx	-	-	ko:K04755	-	-	-	-	ko00000	-	-	-	Fer2
SX1_k127_2738901_2	1297865.APJD01000047_gene4775	4.158e-101	330.0	COG0824@1|root,COG0824@2|Bacteria,1MZFI@1224|Proteobacteria,2U5Q6@28211|Alphaproteobacteria,3JSEZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Acyl-ACP thioesterase	MA20_08165	-	-	ko:K07107	-	-	-	-	ko00000,ko01000	-	-	-	4HBT,4HBT_2,Acyl-ACP_TE
SX1_k127_2738901_1	1297865.APJD01000047_gene4774	3.494e-222	689.0	COG0492@1|root,COG0492@2|Bacteria,1MW14@1224|Proteobacteria,2TSKU@28211|Alphaproteobacteria,3JTH2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Ferredoxin--NADP reductase	MA20_08170	-	1.8.1.9	ko:K00384	ko00450,map00450	-	R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2,Pyr_redox_3
SX1_k127_2746617_3	1297865.APJD01000010_gene4934	4.16e-116	376.0	COG1309@1|root,COG1309@2|Bacteria,1R67Z@1224|Proteobacteria,2VF1G@28211|Alphaproteobacteria,3JUFF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_2746617_2	1297865.APJD01000010_gene4935	2.228e-254	787.0	COG0477@1|root,COG2814@2|Bacteria,1MVHG@1224|Proteobacteria,2TRA4@28211|Alphaproteobacteria,3JSPN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	MA20_36250	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_2746617_1	1297865.APJD01000010_gene4937	2.312e-292	904.0	COG0004@1|root,COG0004@2|Bacteria,1NR9F@1224|Proteobacteria,2TT2J@28211|Alphaproteobacteria,3JQXC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Ammonium Transporter	amtB	-	-	ko:K03320	-	-	-	-	ko00000,ko02000	1.A.11	-	-	Ammonium_transp
SX1_k127_2746617_7	1297865.APJD01000010_gene4938	6.356e-23	100.0	2AETE@1|root,314QE@2|Bacteria,1NB5S@1224|Proteobacteria,2UFMG@28211|Alphaproteobacteria,3K108@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2746617_4	1297865.APJD01000010_gene4939	6.152e-110	359.0	2BZSP@1|root,331XA@2|Bacteria,1R6PZ@1224|Proteobacteria,2TSEG@28211|Alphaproteobacteria,3JSZ9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2746617_6	398525.KB900701_gene5444	7.625e-26	108.0	COG0267@1|root,COG0267@2|Bacteria,1N6QV@1224|Proteobacteria,2UF4D@28211|Alphaproteobacteria,3K0Z0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the bacterial ribosomal protein bL33 family	rpmG	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02913	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L33
SX1_k127_2746617_0	1297865.APJD01000010_gene4941	6.705e-296	908.0	COG2141@1|root,COG2141@2|Bacteria,1MUVN@1224|Proteobacteria,2TR26@28211|Alphaproteobacteria,3JQKW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Luciferase-like monooxygenase	MA20_36320	-	1.14.14.5	ko:K04091	ko00920,map00920	-	R07210,R10206	RC01779,RC02556	ko00000,ko00001,ko01000	-	-	-	Bac_luciferase
SX1_k127_2746617_9	1304877.KI519399_gene3301	0.0003196	46.0	2A79Y@1|root,30W6M@2|Bacteria,1RD3K@1224|Proteobacteria,2U7AJ@28211|Alphaproteobacteria,3JYYU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2746617_5	1297865.APJD01000010_gene4942	1.129e-84	280.0	COG0494@1|root,COG0494@2|Bacteria,1N8EV@1224|Proteobacteria,2TTNV@28211|Alphaproteobacteria,3JUJI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes	MA20_36340	-	-	-	-	-	-	-	-	-	-	-	NUDIX
SX1_k127_274731_2	1297865.APJD01000003_gene6292	2.826e-126	404.0	COG0730@1|root,COG0730@2|Bacteria,1NJFY@1224|Proteobacteria,2TU93@28211|Alphaproteobacteria,3JR4Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sulfite exporter TauE/SafE	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
SX1_k127_274731_4	1297865.APJD01000003_gene6291	2.695e-92	304.0	COG5646@1|root,COG5646@2|Bacteria,1N03F@1224|Proteobacteria,2U57T@28211|Alphaproteobacteria,3JYDA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	InterPro IPR014922	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801
SX1_k127_274731_0	1230476.C207_02836	0.0	1391.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,3JQV4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Diguanylate cyclase	MA20_40485	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,PAS_7,PAS_8
SX1_k127_274731_5	1230476.C207_02837	5.931e-92	303.0	COG0454@1|root,COG0456@2|Bacteria,1MYBJ@1224|Proteobacteria,2UAK7@28211|Alphaproteobacteria,3K3Z5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
SX1_k127_274731_1	1297865.APJD01000003_gene6288	1.713e-216	671.0	COG3770@1|root,COG3770@2|Bacteria,1MU9I@1224|Proteobacteria,2TR3K@28211|Alphaproteobacteria,3JRJZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Penicillin-insensitive murein endopeptidase	mepA	-	-	ko:K07261	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	-	-	Peptidase_M74
SX1_k127_274731_3	1230476.C207_02839	1.583e-102	335.0	2C08V@1|root,3306E@2|Bacteria,1RB1Y@1224|Proteobacteria,2U6D9@28211|Alphaproteobacteria,3JX0J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Evidence 4 Homologs of previously reported genes of	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_274731_6	1297865.APJD01000003_gene6286	5.019e-32	126.0	COG0725@1|root,COG0725@2|Bacteria,1MVNA@1224|Proteobacteria,2U5B1@28211|Alphaproteobacteria,3JU6M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein	modA	-	-	ko:K02020	ko02010,map02010	M00189	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.8	-	-	SBP_bac_11
SX1_k127_276620_0	1297865.APJD01000007_gene1978	0.0	1001.0	COG2303@1|root,COG2303@2|Bacteria,1MV19@1224|Proteobacteria,2TQKQ@28211|Alphaproteobacteria,3JUPN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	GMC oxidoreductase	MA20_01285	-	1.1.99.1	ko:K00108	ko00260,ko01100,map00260,map01100	M00555	R01025	RC00087	ko00000,ko00001,ko00002,ko01000	-	-	-	GMC_oxred_C,GMC_oxred_N
SX1_k127_276620_1	1297865.APJD01000007_gene1979	4.588e-154	486.0	COG2072@1|root,COG2072@2|Bacteria,1MU71@1224|Proteobacteria,2TV2E@28211|Alphaproteobacteria,3JQVH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	FMO-like,K_oxygenase,NAD_binding_8,Pyr_redox_2
SX1_k127_277286_1	1297865.APJD01000023_gene1044	7.41e-204	634.0	COG2124@1|root,COG2124@2|Bacteria,1MV8Q@1224|Proteobacteria,2TRWW@28211|Alphaproteobacteria,3JU2D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Belongs to the cytochrome P450 family	MA20_04495	-	-	-	-	-	-	-	-	-	-	-	p450
SX1_k127_277286_0	1297865.APJD01000023_gene1045	6.639e-290	892.0	COG2124@1|root,COG2124@2|Bacteria,1MV8Q@1224|Proteobacteria,2TRWW@28211|Alphaproteobacteria,3JR28@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Cytochrome P450	MA20_04500	-	-	-	-	-	-	-	-	-	-	-	p450
SX1_k127_2795755_1	1297865.APJD01000001_gene5931	3.336e-217	676.0	COG0491@1|root,COG0491@2|Bacteria,1MY6G@1224|Proteobacteria,2TTBX@28211|Alphaproteobacteria,3JS8K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
SX1_k127_2795755_0	1297865.APJD01000001_gene5932	4.338e-300	923.0	COG0457@1|root,COG4249@1|root,COG0457@2|Bacteria,COG4249@2|Bacteria,1MXFD@1224|Proteobacteria,2TRW5@28211|Alphaproteobacteria,3JR0X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14,Sel1,TPR_1,TPR_2,TPR_8
SX1_k127_2795755_3	1297865.APJD01000001_gene5933	5.077e-111	359.0	COG0586@1|root,COG0586@2|Bacteria,1R0F3@1224|Proteobacteria,2U088@28211|Alphaproteobacteria,3JR8I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SNARE associated Golgi protein	MA20_30625	-	-	-	-	-	-	-	-	-	-	-	SNARE_assoc
SX1_k127_2795755_4	1297865.APJD01000001_gene5934	3.257e-68	234.0	COG3278@1|root,COG3278@2|Bacteria,1NA04@1224|Proteobacteria,2UG1T@28211|Alphaproteobacteria,3JZAU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Belongs to the heme-copper respiratory oxidase family	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2795755_2	1297865.APJD01000001_gene5935	2.504e-196	612.0	COG0187@1|root,COG0187@2|Bacteria,1MVH1@1224|Proteobacteria,2TQZV@28211|Alphaproteobacteria,3JRV8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule	parE	-	-	ko:K02622	-	-	-	-	ko00000,ko01000,ko02048,ko03032,ko03036	-	-	-	DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim
SX1_k127_2798037_1	1297865.APJD01000014_gene686	2.081e-179	573.0	COG3485@1|root,COG3485@2|Bacteria,1MX7W@1224|Proteobacteria,2TT8T@28211|Alphaproteobacteria,3JWT1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Catechol dioxygenase N terminus	-	-	1.13.11.1	ko:K03381	ko00361,ko00362,ko00364,ko00623,ko01100,ko01120,ko01220,map00361,map00362,map00364,map00623,map01100,map01120,map01220	M00568	R00817,R04258,R05299,R08114,R08115,R09134	RC00388,RC00535,RC01366	ko00000,ko00001,ko00002,ko01000	-	-	-	Dioxygenase_C,Dioxygenase_N
SX1_k127_2798037_3	1297865.APJD01000014_gene685	2.881e-108	360.0	COG1853@1|root,COG1853@2|Bacteria,1PMEZ@1224|Proteobacteria,2TUEZ@28211|Alphaproteobacteria,3K6DV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Flavin reductase like domain	-	-	-	-	-	-	-	-	-	-	-	-	Flavin_Reduct
SX1_k127_2798037_2	1297865.APJD01000014_gene684	2.09e-116	378.0	COG0196@1|root,COG0196@2|Bacteria,1RAF5@1224|Proteobacteria,2U6CX@28211|Alphaproteobacteria,3JXGR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	FAD synthetase	-	-	2.7.1.26,2.7.7.2	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R00161,R00549	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_syn
SX1_k127_2798037_0	1297865.APJD01000014_gene683	0.0	1078.0	COG2368@1|root,COG2368@2|Bacteria,1PEQG@1224|Proteobacteria,2TVQ7@28211|Alphaproteobacteria,3JWEV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	4-hydroxyphenylacetate 3-hydroxylase C terminal	-	-	1.14.14.9	ko:K00483	ko00350,ko01120,ko01220,map00350,map01120,map01220	-	R02698,R03299	RC00046	ko00000,ko00001,ko01000	-	-	-	HpaB,HpaB_N
SX1_k127_2798037_4	1230476.C207_02016	1.597e-11	66.0	COG4829@1|root,COG4829@2|Bacteria,1MZDX@1224|Proteobacteria,2UCJ5@28211|Alphaproteobacteria,3JZFX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Muconolactone delta-isomerase	-	-	5.3.3.4	ko:K03464	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	M00568	R06990	RC01109	ko00000,ko00001,ko00002,ko01000	-	-	-	MIase
SX1_k127_2800613_2	1297865.APJD01000014_gene543	3.635e-132	421.0	COG1804@1|root,COG1804@2|Bacteria,1MVY1@1224|Proteobacteria,2TVJ9@28211|Alphaproteobacteria,3JSQ1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA-transferase family III	MA20_27250	-	2.8.3.16	ko:K07749	-	-	-	-	ko00000,ko01000	-	-	-	CoA_transf_3
SX1_k127_2800613_0	1297865.APJD01000014_gene542	6.48e-261	805.0	COG1960@1|root,COG1960@2|Bacteria,1MVAH@1224|Proteobacteria,2TR02@28211|Alphaproteobacteria,3JR2G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_2800613_6	1037409.BJ6T_67400	2.557e-05	46.0	COG0587@1|root,COG0587@2|Bacteria,1MUE4@1224|Proteobacteria,2TRUB@28211|Alphaproteobacteria,3JUU5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase	dnaE2	GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496	2.7.7.7	ko:K02337,ko:K14162	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_alpha,HHH_6,PHP,tRNA_anti-codon
SX1_k127_2800613_1	1297865.APJD01000014_gene541	2.503e-243	752.0	COG0183@1|root,COG0183@2|Bacteria,1MUZV@1224|Proteobacteria,2TRHF@28211|Alphaproteobacteria,3JTMF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Thiolase, N-terminal domain	MA20_27255	-	-	-	-	-	-	-	-	-	-	-	Thiolase_C,Thiolase_N
SX1_k127_2800613_3	1297865.APJD01000014_gene540	5.632e-72	248.0	COG1545@1|root,COG1545@2|Bacteria,1RDFZ@1224|Proteobacteria,2U8BV@28211|Alphaproteobacteria,3JYUU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	DUF35 OB-fold domain, acyl-CoA-associated	-	-	-	-	-	-	-	-	-	-	-	-	DUF35_N,OB_aCoA_assoc
SX1_k127_2800613_4	1297865.APJD01000014_gene538	2.274e-14	72.0	COG2128@1|root,COG2128@2|Bacteria,1MVWP@1224|Proteobacteria,2TV9H@28211|Alphaproteobacteria,3JUJK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Carboxymuconolactone decarboxylase family	MA20_27265	-	-	-	-	-	-	-	-	-	-	-	CMD
SX1_k127_280884_4	1297865.APJD01000028_gene5224	2.843e-50	179.0	COG5568@1|root,COG5568@2|Bacteria,1N9BT@1224|Proteobacteria,2UFNF@28211|Alphaproteobacteria,3K04V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1150)	MA20_24245	-	-	-	-	-	-	-	-	-	-	-	DUF1150
SX1_k127_280884_3	1230476.C207_02259	4.363e-85	283.0	COG0071@1|root,COG0071@2|Bacteria,1R9Y1@1224|Proteobacteria,2UA1J@28211|Alphaproteobacteria,3JT6X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Belongs to the small heat shock protein (HSP20) family	hspH	-	-	ko:K04080	-	-	-	-	ko00000,ko03110	-	-	-	HSP20
SX1_k127_280884_0	1297865.APJD01000028_gene5226	5.157e-226	707.0	COG3842@1|root,COG3842@2|Bacteria,1MU3I@1224|Proteobacteria,2TQQJ@28211|Alphaproteobacteria,3JQYC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system	ugpC	-	3.6.3.20	ko:K05816	ko02010,map02010	M00198	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.1.3	-	-	ABC_tran,TOBE_2
SX1_k127_280884_2	1297865.APJD01000028_gene5227	1.395e-168	539.0	COG0395@1|root,COG0395@2|Bacteria,1MUWS@1224|Proteobacteria,2TSYA@28211|Alphaproteobacteria,3JQM9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	probably responsible for the translocation of the substrate across the membrane	ugpE	-	-	ko:K02026,ko:K05815	ko02010,map02010	M00198,M00207	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1,3.A.1.1.3	-	-	BPD_transp_1
SX1_k127_280884_1	1297865.APJD01000028_gene5228	1.64e-172	542.0	COG1175@1|root,COG1175@2|Bacteria,1MVAP@1224|Proteobacteria,2TSGN@28211|Alphaproteobacteria,3JQME@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Binding-protein-dependent transport system inner membrane component	ugpA	-	-	ko:K05814	ko02010,map02010	M00198	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.3	-	-	BPD_transp_1
SX1_k127_2812193_8	1297865.APJD01000001_gene6014	1.58e-14	73.0	COG0697@1|root,COG0697@2|Bacteria,1NEYM@1224|Proteobacteria,2TX6U@28211|Alphaproteobacteria,3JRXZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	MA20_29065	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_2812193_0	1297865.APJD01000001_gene6013	0.0	1414.0	COG0784@1|root,COG4191@1|root,COG5278@1|root,COG0784@2|Bacteria,COG4191@2|Bacteria,COG5278@2|Bacteria,1RCM9@1224|Proteobacteria,2TQQ9@28211|Alphaproteobacteria,3JUCI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	CHASE3 domain	-	-	-	-	-	-	-	-	-	-	-	-	CHASE3,HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_8,Response_reg
SX1_k127_2812193_6	1297865.APJD01000001_gene6012	1.081e-80	270.0	COG0745@1|root,COG0745@2|Bacteria,1N9SP@1224|Proteobacteria,2U6CP@28211|Alphaproteobacteria,3JY7U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KT	cheY-homologous receiver domain	MA20_29080	-	-	-	-	-	-	-	-	-	-	-	Response_reg
SX1_k127_2812193_2	1297865.APJD01000001_gene6011	7.348e-176	557.0	COG0697@1|root,COG0697@2|Bacteria,1NEYM@1224|Proteobacteria,2TX6U@28211|Alphaproteobacteria,3JU0M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_2812193_5	1297865.APJD01000001_gene6010	1.718e-91	303.0	2E9ZT@1|root,33457@2|Bacteria,1RC3E@1224|Proteobacteria,2U4S1@28211|Alphaproteobacteria,3JV9I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	BA14K-like protein	-	-	-	-	-	-	-	-	-	-	-	-	BA14K
SX1_k127_2812193_4	1297865.APJD01000001_gene6009	2.151e-93	308.0	COG3761@1|root,COG3761@2|Bacteria,1RHS3@1224|Proteobacteria,2U95G@28211|Alphaproteobacteria,3JYGF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NADH ubiquinone oxidoreductase subunit NDUFA12	MA20_29090	-	1.6.99.3	ko:K00356	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	-	-	-	NDUFA12
SX1_k127_2812193_3	1297865.APJD01000001_gene6008	1.756e-145	462.0	COG0693@1|root,COG0693@2|Bacteria,1N8N6@1224|Proteobacteria,2TT0U@28211|Alphaproteobacteria,3JTZY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	DJ-1/PfpI family	MA20_29100	-	4.2.1.103	ko:K18199	ko00930,map00930	-	R05771	RC01467	ko00000,ko00001,ko01000,ko01002	-	-	-	DJ-1_PfpI
SX1_k127_2812193_1	1297865.APJD01000001_gene6007	2.193e-198	619.0	COG4977@1|root,COG4977@2|Bacteria,1MUDK@1224|Proteobacteria,2TS7I@28211|Alphaproteobacteria,3JSNX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	MA20_29105	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI,HTH_18
SX1_k127_2812193_7	1297865.APJD01000001_gene6006	4.573e-65	222.0	COG1055@1|root,COG1055@2|Bacteria,1MUH8@1224|Proteobacteria,2U0BW@28211|Alphaproteobacteria,3JU7T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Sodium proton antiporter, NhaD family	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2834857_2	1297865.APJD01000009_gene2736	2.896e-56	196.0	COG2080@1|root,COG2080@2|Bacteria,1RD8C@1224|Proteobacteria,2U6Z6@28211|Alphaproteobacteria,3JRRA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	[2Fe-2S] binding domain	MA20_34360	-	1.3.99.16	ko:K07302	-	-	-	-	ko00000,ko01000	-	-	-	Fer2,Fer2_2
SX1_k127_2834857_0	1297865.APJD01000009_gene2737	0.0	1570.0	COG1529@1|root,COG1529@2|Bacteria,1QTTJ@1224|Proteobacteria,2TQVK@28211|Alphaproteobacteria,3JSM1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain	MA20_34355	-	1.3.99.16	ko:K07303	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2
SX1_k127_2834857_3	1230476.C207_03614	6.592e-34	132.0	2ACAI@1|root,311VB@2|Bacteria,1N2EB@1224|Proteobacteria,2UCDV@28211|Alphaproteobacteria,3K06H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2834857_1	1297865.APJD01000009_gene2739	7.489e-249	766.0	COG4993@1|root,COG4993@2|Bacteria,1MUQX@1224|Proteobacteria,2TS2Q@28211|Alphaproteobacteria,3JSFY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	PQQ-like domain	MA20_34345	-	1.1.2.8	ko:K00114	ko00010,ko00625,ko01100,ko01110,ko01120,ko01130,map00010,map00625,map01100,map01110,map01120,map01130	-	R05062,R05198,R05285	RC00087,RC00088,RC01039	ko00000,ko00001,ko01000	-	-	-	PQQ,PQQ_2
SX1_k127_2840110_1	1297865.APJD01000011_gene6720	1.525e-213	666.0	COG0834@1|root,COG0834@2|Bacteria,1MXIA@1224|Proteobacteria,2VETI@28211|Alphaproteobacteria,3JS6K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	ET	Bacterial periplasmic substrate-binding proteins	MA20_22110	-	-	ko:K02030	-	M00236	-	-	ko00000,ko00002,ko02000	3.A.1.3	-	-	SBP_bac_3
SX1_k127_2840110_3	1297865.APJD01000011_gene6719	1.456e-124	400.0	COG1999@1|root,COG1999@2|Bacteria,1RHJ8@1224|Proteobacteria,2U9DV@28211|Alphaproteobacteria,3JREY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	electron transport protein SCO1 SenC	MA20_22115	-	-	ko:K07152	-	-	-	-	ko00000,ko03029	-	-	-	SCO1-SenC
SX1_k127_2840110_5	1297865.APJD01000011_gene6718	4.415e-31	122.0	2AIJV@1|root,3191Z@2|Bacteria,1N41B@1224|Proteobacteria,2UCTX@28211|Alphaproteobacteria,3K0UP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2840110_4	1230476.C207_03128	1.152e-96	321.0	2EHAM@1|root,33B2H@2|Bacteria,1MY41@1224|Proteobacteria,2U1A7@28211|Alphaproteobacteria,3JRY4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_22125	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2840110_0	1297865.APJD01000011_gene6716	0.0	1136.0	COG3573@1|root,COG3573@2|Bacteria,1MVX8@1224|Proteobacteria,2TVKJ@28211|Alphaproteobacteria,3JSJV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	FAD binding domain	MA20_22130	-	-	ko:K07077	-	-	-	-	ko00000	-	-	-	FAD_binding_2
SX1_k127_2840110_2	1297865.APJD01000011_gene6715	1.847e-161	509.0	COG1167@1|root,COG1167@2|Bacteria,1MVGT@1224|Proteobacteria,2TRK7@28211|Alphaproteobacteria,3JQR8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix gluconate operon transcriptional repressor	-	-	-	ko:K00375	-	-	-	-	ko00000,ko03000	-	-	-	Aminotran_1_2,GntR
SX1_k127_2840241_7	1297865.APJD01000028_gene5182	1.924e-97	319.0	COG2981@1|root,COG2981@2|Bacteria,1MWAA@1224|Proteobacteria,2TT6E@28211|Alphaproteobacteria,3JT5R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Etoposide-induced protein 2.4 (EI24)	MA20_24505	-	-	ko:K06203	-	-	-	-	ko00000	-	-	-	EI24
SX1_k127_2840241_0	1297865.APJD01000028_gene5181	0.0	1072.0	COG0477@1|root,COG0477@2|Bacteria,1QTUX@1224|Proteobacteria,2TTN1@28211|Alphaproteobacteria,3JTZI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	-	-	-	ko:K03446	-	M00701	-	-	ko00000,ko00002,ko02000	2.A.1.3	-	-	MFS_1
SX1_k127_2840241_2	1126627.BAWE01000002_gene1107	6.66e-167	532.0	COG1566@1|root,COG1566@2|Bacteria,1MU7I@1224|Proteobacteria,2TS39@28211|Alphaproteobacteria,3JSDA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Biotin-lipoyl like	-	-	-	ko:K03543	-	M00701	-	-	ko00000,ko00002,ko02000	8.A.1.1	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
SX1_k127_2840241_3	1297865.APJD01000028_gene5179	2.383e-165	525.0	COG0177@1|root,COG0177@2|Bacteria,1MUYQ@1224|Proteobacteria,2TRI2@28211|Alphaproteobacteria,3JSDR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate	nth	-	4.2.99.18	ko:K10773	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	EndIII_4Fe-2S,HhH-GPD
SX1_k127_2840241_6	1297865.APJD01000028_gene5178	3.693e-115	371.0	COG5488@1|root,COG5488@2|Bacteria,1NPQQ@1224|Proteobacteria,2UB81@28211|Alphaproteobacteria,3JRPQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Integral membrane protein (DUF2244)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2244
SX1_k127_2840241_1	1297865.APJD01000028_gene5177	7.148e-199	621.0	COG0350@1|root,COG2169@1|root,COG0350@2|Bacteria,COG2169@2|Bacteria,1N2YQ@1224|Proteobacteria,2TQRX@28211|Alphaproteobacteria,3JVM9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	6-O-methylguanine DNA methyltransferase, DNA binding domain	ada	-	2.1.1.63	ko:K10778	-	-	-	-	ko00000,ko01000,ko03000,ko03400	-	-	-	DNA_binding_1,HTH_18
SX1_k127_2840241_5	1297865.APJD01000028_gene5176	4.193e-133	425.0	COG0588@1|root,COG0588@2|Bacteria,1MUVE@1224|Proteobacteria,2TSQ0@28211|Alphaproteobacteria,3JQTI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily	gpmA	GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031	5.4.2.11	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	M00001,M00002,M00003	R01518	RC00536	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	-	-	-	His_Phos_1
SX1_k127_2840241_4	1230476.C207_04060	3.079e-159	503.0	COG0289@1|root,COG0289@2|Bacteria,1MUCT@1224|Proteobacteria,2TSFJ@28211|Alphaproteobacteria,3JRSZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate	dapB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576	1.17.1.8	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R04198,R04199	RC00478	ko00000,ko00001,ko00002,ko01000	-	-	-	DapB_C,DapB_N
SX1_k127_2840241_8	1297865.APJD01000028_gene5174	9.318e-60	213.0	COG5470@1|root,COG5470@2|Bacteria,1N7JA@1224|Proteobacteria,2UBQW@28211|Alphaproteobacteria,3JZD7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF1330)	MA20_24570	-	-	-	-	-	-	-	-	-	-	-	DUF1330
SX1_k127_2840241_9	1297865.APJD01000028_gene5173	4.377e-51	181.0	COG0284@1|root,COG0284@2|Bacteria,1MW2C@1224|Proteobacteria,2TTB3@28211|Alphaproteobacteria,3JTIS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)	pyrF	GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	4.1.1.23	ko:K01591	ko00240,ko01100,map00240,map01100	M00051	R00965	RC00409	ko00000,ko00001,ko00002,ko01000	-	-	-	OMPdecase
SX1_k127_2840977_0	1297865.APJD01000036_gene1459	0.0	1551.0	COG0419@1|root,COG0419@2|Bacteria,1MWCT@1224|Proteobacteria,2TS61@28211|Alphaproteobacteria,3K6Q4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Domain of unknown function (DUF4175)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4175
SX1_k127_2840977_2	1230476.C207_05125	2.99e-79	264.0	COG0599@1|root,COG0599@2|Bacteria,1RJU6@1224|Proteobacteria,2U5JQ@28211|Alphaproteobacteria,3JY0N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Carboxymuconolactone decarboxylase family	MA20_20490	-	4.1.1.44	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	-	R03470	RC00938	ko00000,ko00001,ko01000	-	-	-	CMD
SX1_k127_2840977_1	1297865.APJD01000036_gene1457	2.899e-183	574.0	COG2084@1|root,COG2084@2|Bacteria,1MWR4@1224|Proteobacteria,2U157@28211|Alphaproteobacteria,3JS3J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase	MA20_20495	-	1.1.1.31	ko:K00020	ko00280,ko01100,map00280,map01100	-	R05066	RC00099	ko00000,ko00001,ko01000	-	-	-	NAD_binding_11,NAD_binding_2
SX1_k127_2840977_3	1297865.APJD01000036_gene1456	1.833e-60	209.0	COG0019@1|root,COG0019@2|Bacteria,1MUA6@1224|Proteobacteria,2TQPB@28211|Alphaproteobacteria,3JU3D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine	lysA	GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008836,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	4.1.1.20	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R00451	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Orn_Arg_deC_N,Orn_DAP_Arg_deC
SX1_k127_2845698_1	1297865.APJD01000019_gene3158	1.205e-190	597.0	COG0405@1|root,COG0405@2|Bacteria,1MUV6@1224|Proteobacteria,2TR49@28211|Alphaproteobacteria,3JRHC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Gamma-glutamyltranspeptidase	ggt	-	2.3.2.2,3.4.19.13	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	-	R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935	RC00064,RC00090,RC00096	ko00000,ko00001,ko01000,ko01002	-	-	-	G_glu_transpept
SX1_k127_2845698_0	1297865.APJD01000019_gene3159	6.068e-290	895.0	COG2270@1|root,COG2270@2|Bacteria,1MWXB@1224|Proteobacteria,2TSCV@28211|Alphaproteobacteria,3JSCP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Major facilitator superfamily	MA20_25070	-	-	ko:K06902	ko04138,map04138	-	-	-	ko00000,ko00001,ko02000,ko04131	2.A.1.24,9.A.15.1	-	-	ATG22
SX1_k127_2855844_4	1297865.APJD01000002_gene4060	3.338e-163	515.0	COG1028@1|root,COG1028@2|Bacteria,1MU3W@1224|Proteobacteria,2TT5X@28211|Alphaproteobacteria,3JU5R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	MA20_31015	-	1.1.1.304,1.1.1.76	ko:K18009	ko00650,map00650	-	R03707,R09078,R10505	RC00205,RC00525	ko00000,ko00001,ko01000	-	-	-	adh_short_C2
SX1_k127_2855844_6	1230476.C207_01644	1.202e-155	491.0	COG0406@1|root,COG0406@2|Bacteria,1N41V@1224|Proteobacteria,2U09E@28211|Alphaproteobacteria,3JRYJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Phosphoglycerate mutase family	MA20_31010	-	3.1.3.73	ko:K02226	ko00860,ko01100,map00860,map01100	M00122	R04594,R11173	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	His_Phos_1
SX1_k127_2855844_5	1297865.APJD01000002_gene4062	3.087e-160	506.0	COG1028@1|root,COG1028@2|Bacteria,1MWGC@1224|Proteobacteria,2TSNX@28211|Alphaproteobacteria,3JQUD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Dehydrogenase	MA20_31005	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_2855844_1	1297865.APJD01000002_gene4063	1.725e-267	825.0	COG1680@1|root,COG1680@2|Bacteria,1MVPR@1224|Proteobacteria,2TRWZ@28211|Alphaproteobacteria,3JSIF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase	MA20_31000	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SX1_k127_2855844_2	1297865.APJD01000002_gene4064	1.623e-259	802.0	COG0683@1|root,COG0683@2|Bacteria,1MUCB@1224|Proteobacteria,2TRWV@28211|Alphaproteobacteria,3JUH7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	MA20_18845	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_2855844_7	1297865.APJD01000002_gene4065	2.456e-153	486.0	COG2186@1|root,COG2186@2|Bacteria,1R5KH@1224|Proteobacteria,2TSJE@28211|Alphaproteobacteria,3JSDY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FCD	-	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SX1_k127_2855844_0	1297865.APJD01000002_gene4066	0.0	1077.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JTDD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	MA20_18835	-	-	ko:K00666	-	-	-	-	ko00000,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_2855844_11	1230476.C207_01637	2.501e-64	221.0	COG0690@1|root,COG0690@2|Bacteria,1N75P@1224|Proteobacteria,2UF51@28211|Alphaproteobacteria,3K0CY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation	secE	-	-	ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2	-	-	SecE
SX1_k127_2855844_9	1298867.AUES01000002_gene1578	2.181e-107	356.0	COG0250@1|root,COG0250@2|Bacteria,1MU14@1224|Proteobacteria,2TRID@28211|Alphaproteobacteria,3JUEY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Participates in transcription elongation, termination and antitermination	nusG	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141	-	ko:K02601	-	-	-	-	ko00000,ko03009,ko03021	-	-	-	KOW,NusG
SX1_k127_2855844_10	172088.AUGA01000021_gene5278	2.724e-82	274.0	COG0080@1|root,COG0080@2|Bacteria,1RA2M@1224|Proteobacteria,2U760@28211|Alphaproteobacteria,3JV49@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors	rplK	GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02867	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L11,Ribosomal_L11_N
SX1_k127_2855844_8	172088.AUGA01000021_gene5277	2.919e-138	440.0	COG0081@1|root,COG0081@2|Bacteria,1MUE6@1224|Proteobacteria,2TRXP@28211|Alphaproteobacteria,3JVAW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release	rplA	GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02863	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L1
SX1_k127_2855844_3	1297865.APJD01000002_gene4071	3.228e-202	630.0	COG1052@1|root,COG1052@2|Bacteria,1MWID@1224|Proteobacteria,2U0JS@28211|Alphaproteobacteria,3JRJS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	D-isomer specific 2-hydroxyacid dehydrogenase	MA20_35215	-	1.1.1.26	ko:K00015	ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120	-	R00717,R01388	RC00031,RC00042	ko00000,ko00001,ko01000	-	-	-	2-Hacid_dh,2-Hacid_dh_C
SX1_k127_2862486_5	1230476.C207_02845	5.028e-55	193.0	COG3264@1|root,COG3264@2|Bacteria,1MWSA@1224|Proteobacteria,2TRKK@28211|Alphaproteobacteria,3JSMB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Mechanosensitive ion channel	MA20_40450	-	-	-	-	-	-	-	-	-	-	-	MS_channel
SX1_k127_2862486_2	1297865.APJD01000003_gene6280	2.919e-185	580.0	COG0024@1|root,COG0024@2|Bacteria,1MU99@1224|Proteobacteria,2TQTH@28211|Alphaproteobacteria,3JT7V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Methionine aminopeptidase	map	-	3.4.11.18	ko:K01265	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M24
SX1_k127_2862486_3	1297865.APJD01000003_gene6279	6.176e-157	502.0	COG2818@1|root,COG2818@2|Bacteria,1R3WB@1224|Proteobacteria,2TTR8@28211|Alphaproteobacteria,3JRTZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Methyladenine glycosylase	MA20_23545	-	-	-	-	-	-	-	-	-	-	-	Adenine_glyco
SX1_k127_2862486_1	1297865.APJD01000003_gene6278	7.672e-188	587.0	COG3485@1|root,COG3485@2|Bacteria,1MV6K@1224|Proteobacteria,2TUS4@28211|Alphaproteobacteria,3JV34@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Dioxygenase	-	-	-	-	-	-	-	-	-	-	-	-	Dioxygenase_C
SX1_k127_2862486_4	1297865.APJD01000003_gene6277	1.956e-146	473.0	COG2003@1|root,COG2003@2|Bacteria,1MXZ5@1224|Proteobacteria,2TQXM@28211|Alphaproteobacteria,3JUPY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Belongs to the UPF0758 family	radC	-	-	ko:K03630	-	-	-	-	ko00000	-	-	-	RadC
SX1_k127_2862486_0	1297865.APJD01000003_gene6276	0.0	1208.0	COG1523@1|root,COG1523@2|Bacteria,1MU19@1224|Proteobacteria,2TRVS@28211|Alphaproteobacteria,3JR1B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Belongs to the glycosyl hydrolase 13 family	glgX	-	3.2.1.196,3.2.1.68	ko:K01214,ko:K02438	ko00500,ko01100,ko01110,map00500,map01100,map01110	M00565	R02111,R09995,R11261	-	ko00000,ko00001,ko00002,ko01000	-	CBM48,GH13	-	Alpha-amylase,CBM_48
SX1_k127_2873704_0	1297865.APJD01000024_gene397	1.116e-274	849.0	COG1271@1|root,COG1271@2|Bacteria,1MV60@1224|Proteobacteria,2TQMA@28211|Alphaproteobacteria,3JXDA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome bd terminal oxidase subunit I	cydA	-	1.10.3.14	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cyt_bd_oxida_I
SX1_k127_2873704_2	1297865.APJD01000024_gene395	2.138e-88	293.0	2E8Z2@1|root,3338N@2|Bacteria,1N5F4@1224|Proteobacteria,2UDEV@28211|Alphaproteobacteria,3K01Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2873704_1	1297865.APJD01000024_gene394	3.194e-156	493.0	COG0664@1|root,COG0664@2|Bacteria,1MVGE@1224|Proteobacteria,2TV0E@28211|Alphaproteobacteria,3JUFD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	DNA-binding transcription factor activity	fnrL	-	-	ko:K01420	-	-	-	-	ko00000,ko03000	-	-	-	Crp,HTH_Crp_2,cNMP_binding
SX1_k127_288329_5	1297865.APJD01000007_gene2308	7.596e-83	284.0	COG3181@1|root,COG3181@2|Bacteria,1R9KJ@1224|Proteobacteria,2U22P@28211|Alphaproteobacteria,3JVC2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter family receptor	-	-	-	-	-	-	-	-	-	-	-	-	TctC
SX1_k127_288329_3	1297865.APJD01000007_gene2309	6.974e-168	528.0	COG1414@1|root,COG1414@2|Bacteria,1R4WS@1224|Proteobacteria,2TV0A@28211|Alphaproteobacteria,3JTY6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix isocitrate lyase regulation	-	-	-	-	-	-	-	-	-	-	-	-	HTH_IclR,IclR
SX1_k127_288329_2	1297865.APJD01000007_gene2310	1.607e-283	871.0	COG1960@1|root,COG1960@2|Bacteria,1MU2V@1224|Proteobacteria,2TSK3@28211|Alphaproteobacteria,3JWBK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	MA20_16145	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_288329_1	1297865.APJD01000007_gene2311	0.0	1287.0	COG2072@1|root,COG2072@2|Bacteria,1NSY9@1224|Proteobacteria,2TUSD@28211|Alphaproteobacteria,3JUMD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Flavin-binding monooxygenase-like	MA20_26775	-	1.14.13.22	ko:K03379	ko00930,ko01120,ko01220,map00930,map01120,map01220	-	R02231,R06622	RC00662,RC01550	ko00000,ko00001,ko01000	-	-	-	Pyr_redox_2,Pyr_redox_3
SX1_k127_288329_0	1297865.APJD01000007_gene2312	0.0	1324.0	COG2015@1|root,COG2015@2|Bacteria,1MU82@1224|Proteobacteria,2TSM1@28211|Alphaproteobacteria,3JSM0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Alkyl sulfatase dimerisation	MA20_17395	-	-	-	-	-	-	-	-	-	-	-	Alkyl_sulf_C,Alkyl_sulf_dimr,Lactamase_B
SX1_k127_288329_4	1297865.APJD01000007_gene2313	1.299e-141	451.0	COG0410@1|root,COG0410@2|Bacteria,1MVVC@1224|Proteobacteria,2TR61@28211|Alphaproteobacteria,3JQRS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ATPases associated with a variety of cellular activities	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_288329_6	1243664.CAVL020000009_gene657	1.786e-42	160.0	COG0411@1|root,COG0411@2|Bacteria,1TRME@1239|Firmicutes,4I2QY@91061|Bacilli,1ZMTA@1386|Bacillus	91061|Bacilli	E	Branched-chain amino acid ATP-binding cassette transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_2887889_1	1297865.APJD01000005_gene3807	6.579e-205	641.0	COG0642@1|root,COG0642@2|Bacteria,1MX6R@1224|Proteobacteria,2TS9N@28211|Alphaproteobacteria,3JRDW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Histidine kinase	feuQ	-	-	-	-	-	-	-	-	-	-	-	2CSK_N,HATPase_c
SX1_k127_2887889_2	1297865.APJD01000005_gene3806	1.914e-143	455.0	COG0745@1|root,COG0745@2|Bacteria,1N0YI@1224|Proteobacteria,2TSV8@28211|Alphaproteobacteria,3JRE8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Two component transcriptional regulator, winged helix family	feuP	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
SX1_k127_2887889_3	1297865.APJD01000005_gene3805	9.973e-74	249.0	2EFPW@1|root,339FW@2|Bacteria,1N7X2@1224|Proteobacteria,2UAPI@28211|Alphaproteobacteria,3JYXC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	VanZ
SX1_k127_2887889_0	1297865.APJD01000005_gene3804	5.308e-218	677.0	COG1087@1|root,COG1087@2|Bacteria,1MUHI@1224|Proteobacteria,2TTC7@28211|Alphaproteobacteria,3JUVY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	3-beta hydroxysteroid dehydrogenase/isomerase family	exoB	-	5.1.3.2,5.1.3.5	ko:K01784,ko:K12448	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00361,M00362,M00632	R00291,R01473,R02984	RC00289,RC00528	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase
SX1_k127_2887889_5	1297865.APJD01000005_gene3803	3.86e-43	158.0	2ARR6@1|root,31H29@2|Bacteria,1NFHN@1224|Proteobacteria,2UGZ7@28211|Alphaproteobacteria,3K17V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2887889_4	1297865.APJD01000005_gene3802	7.636e-51	180.0	COG1192@1|root,COG1192@2|Bacteria,1R6DZ@1224|Proteobacteria,2U4CB@28211|Alphaproteobacteria,3JXCW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	AAA domain	-	-	-	ko:K03496	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	AAA_31,CbiA
SX1_k127_2888503_12	1297865.APJD01000007_gene2041	5.483e-131	418.0	COG0683@1|root,COG0683@2|Bacteria,1MWR8@1224|Proteobacteria,2U2YF@28211|Alphaproteobacteria,3JU92@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein domain	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_2888503_9	1297865.APJD01000007_gene2040	5.048e-163	524.0	COG2249@1|root,COG2249@2|Bacteria,1MUHN@1224|Proteobacteria,2U15Z@28211|Alphaproteobacteria,3JSDQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Flavodoxin-like fold	-	-	1.6.5.2	ko:K00355	ko00130,ko01110,ko05200,ko05225,ko05418,map00130,map01110,map05200,map05225,map05418	-	R02964,R03643,R03816	RC00819	ko00000,ko00001,ko01000	-	-	-	Flavodoxin_2
SX1_k127_2888503_4	1297865.APJD01000007_gene2039	1.326e-258	804.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TR15@28211|Alphaproteobacteria,3JR8X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_2888503_7	1297865.APJD01000007_gene2038	2.422e-200	627.0	COG0657@1|root,COG0657@2|Bacteria,1RD8A@1224|Proteobacteria,2U1B8@28211|Alphaproteobacteria,3JUPB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Steryl acetyl hydrolase	-	-	3.1.1.83	ko:K14731	ko00903,ko00930,ko01220,map00903,map00930,map01220	-	R03751,R06390,R06391,R06392,R06393	RC00713,RC00983,RC01505	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_3
SX1_k127_2888503_11	1297865.APJD01000007_gene2037	5.03e-146	464.0	COG1028@1|root,COG1028@2|Bacteria,1MU2T@1224|Proteobacteria,2TSDG@28211|Alphaproteobacteria,3JXVD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	-	-	1.1.1.100	ko:K00059,ko:K07535	ko00061,ko00333,ko00362,ko00780,ko01040,ko01100,ko01120,ko01130,ko01212,ko01220,map00061,map00333,map00362,map00780,map01040,map01100,map01120,map01130,map01212,map01220	M00083,M00540,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R05582,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117,RC00154	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
SX1_k127_2888503_10	1297865.APJD01000007_gene2036	6.536e-157	499.0	COG1024@1|root,COG1024@2|Bacteria,1R67S@1224|Proteobacteria,2VF1B@28211|Alphaproteobacteria,3JW4Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	-	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_2888503_13	1297865.APJD01000007_gene2035	8.818e-102	333.0	COG5517@1|root,COG5517@2|Bacteria,1R8ZU@1224|Proteobacteria,2U2SC@28211|Alphaproteobacteria,3JVBM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Ring hydroxylating beta subunit	-	-	-	-	-	-	-	-	-	-	-	-	Ring_hydroxyl_B
SX1_k127_2888503_2	1297865.APJD01000007_gene2034	1.687e-290	893.0	COG4638@1|root,COG4638@2|Bacteria,1N6MJ@1224|Proteobacteria,2TVEE@28211|Alphaproteobacteria,3JUWN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Ring hydroxylating alpha subunit (catalytic domain)	-	-	1.14.12.1	ko:K00479,ko:K16319	ko00627,ko01120,map00627,map01120	M00637	R00823,R00825	RC00192	br01602,ko00000,ko00001,ko00002,ko01000	-	-	-	Rieske,Ring_hydroxyl_A
SX1_k127_2888503_14	1297865.APJD01000007_gene2033	6.722e-99	329.0	2F9JX@1|root,341W6@2|Bacteria,1NF2U@1224|Proteobacteria,2UQPW@28211|Alphaproteobacteria,3K2CE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2888503_6	1297865.APJD01000007_gene2032	4.672e-221	696.0	COG3173@1|root,COG3173@2|Bacteria,1MWAK@1224|Proteobacteria,2U36X@28211|Alphaproteobacteria,3K2X2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Phosphotransferase enzyme family	-	-	-	-	-	-	-	-	-	-	-	-	APH
SX1_k127_2888503_1	1297865.APJD01000007_gene2031	0.0	1063.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3K3JX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_2888503_3	1297865.APJD01000007_gene2030	1.37e-271	837.0	COG0683@1|root,COG0683@2|Bacteria,1NTMN@1224|Proteobacteria,2UQUJ@28211|Alphaproteobacteria,3K38C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_2888503_5	1297865.APJD01000007_gene2029	8.565e-257	791.0	2BYTM@1|root,2ZA70@2|Bacteria,1R3K3@1224|Proteobacteria,2U03V@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2888503_8	1297865.APJD01000007_gene2028	2.704e-200	644.0	COG1946@1|root,COG1946@2|Bacteria,1RJ64@1224|Proteobacteria,2UR6T@28211|Alphaproteobacteria,3K35H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA thioesterase	-	-	-	-	-	-	-	-	-	-	-	-	4HBT_3
SX1_k127_2888503_15	1297865.APJD01000007_gene2027	1.164e-38	146.0	2DHW8@1|root,3015N@2|Bacteria,1N687@1224|Proteobacteria,2UC6M@28211|Alphaproteobacteria,3K0TS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2888503_0	1297865.APJD01000007_gene2026	0.0	1542.0	COG4773@1|root,COG4773@2|Bacteria,1QTT0@1224|Proteobacteria,2TQSQ@28211|Alphaproteobacteria,3JSME@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SX1_k127_2888503_16	1297865.APJD01000007_gene2025	6.477e-23	100.0	COG4122@1|root,COG4122@2|Bacteria,1N57D@1224|Proteobacteria,2TT8Y@28211|Alphaproteobacteria,3JTNU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	O-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_24,Methyltransf_3
SX1_k127_2893060_0	1297865.APJD01000003_gene6402	0.0	2040.0	COG0591@1|root,COG0642@1|root,COG0784@1|root,COG0591@2|Bacteria,COG0784@2|Bacteria,COG2205@2|Bacteria,1MUY7@1224|Proteobacteria,2TR1M@28211|Alphaproteobacteria,3JTFW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Histidine kinase	MA20_19630	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_7,Response_reg
SX1_k127_2893060_1	1297865.APJD01000003_gene6403	9.764e-273	839.0	COG0156@1|root,COG0156@2|Bacteria,1MVVH@1224|Proteobacteria,2TQXI@28211|Alphaproteobacteria,3JSGC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	5-aminolevulinic acid synthase	hemA	-	2.3.1.37	ko:K00643	ko00260,ko00860,ko01100,ko01110,map00260,map00860,map01100,map01110	-	R00830	RC00004,RC02815	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
SX1_k127_2893060_2	1297865.APJD01000003_gene6404	1.042e-240	743.0	COG0491@1|root,COG0491@2|Bacteria,1MUXF@1224|Proteobacteria,2TSYY@28211|Alphaproteobacteria,3JSHZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metallo-beta-lactamase superfamily	MA20_19595	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
SX1_k127_2902062_1	1297865.APJD01000014_gene670	6.019e-296	909.0	COG3696@1|root,COG3696@2|Bacteria,1NUIV@1224|Proteobacteria,2TRWM@28211|Alphaproteobacteria,3JRJE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K15726	-	-	-	-	ko00000,ko02000	2.A.6.1.2	-	-	ACR_tran
SX1_k127_2902062_4	1297865.APJD01000014_gene669	7.072e-253	782.0	COG0845@1|root,COG0845@2|Bacteria,1QNEF@1224|Proteobacteria,2VF10@28211|Alphaproteobacteria,3JS4I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Barrel-sandwich domain of CusB or HlyD membrane-fusion	-	-	-	-	-	-	-	-	-	-	-	-	HlyD_D23
SX1_k127_2902062_5	1297865.APJD01000014_gene668	5.466e-136	434.0	COG0745@1|root,COG0745@2|Bacteria,1MY5Y@1224|Proteobacteria,2VEVS@28211|Alphaproteobacteria,3JSPP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Transcriptional regulatory protein, C terminal	MA20_26015	-	-	ko:K02483,ko:K07666,ko:K07774	ko02020,ko02024,map02020,map02024	M00453,M00457	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
SX1_k127_2902062_2	1297865.APJD01000014_gene667	1.925e-274	852.0	COG0642@1|root,COG2205@2|Bacteria,1N1Z2@1224|Proteobacteria,2TVIP@28211|Alphaproteobacteria,3JVVU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain	-	-	-	-	-	-	-	-	-	-	-	-	2CSK_N,HATPase_c,HisKA
SX1_k127_2902062_3	1297865.APJD01000014_gene666	1.976e-260	805.0	COG0624@1|root,COG0624@2|Bacteria,1MUSU@1224|Proteobacteria,2TV23@28211|Alphaproteobacteria,3JSS1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Peptidase family M28	-	-	3.4.17.11	ko:K01295	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20,Peptidase_M28
SX1_k127_2902062_0	1297865.APJD01000014_gene665	0.0	1015.0	COG4664@1|root,COG4664@2|Bacteria,1R4MZ@1224|Proteobacteria,2TQNR@28211|Alphaproteobacteria,3JUDS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	TRAP C4-dicarboxylate transport system permease DctM subunit	-	-	-	-	-	-	-	-	-	-	-	-	DctM
SX1_k127_2906093_1	1297865.APJD01000009_gene2862	5.979e-169	530.0	COG1960@1|root,COG1960@2|Bacteria,1MU2V@1224|Proteobacteria,2TSK3@28211|Alphaproteobacteria,3JVKG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_2906093_0	1297865.APJD01000009_gene2863	2.611e-283	872.0	COG0151@1|root,COG0151@2|Bacteria,1MUAH@1224|Proteobacteria,2TQR5@28211|Alphaproteobacteria,3JSI5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Belongs to the GARS family	purD	-	6.3.4.13	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04144	RC00090,RC00166	ko00000,ko00001,ko00002,ko01000	-	-	-	GARS_A,GARS_C,GARS_N
SX1_k127_2906093_2	1297865.APJD01000009_gene2864	9.011e-55	192.0	COG1846@1|root,COG1846@2|Bacteria,1RJ4D@1224|Proteobacteria,2U9KA@28211|Alphaproteobacteria,3JZG6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Winged helix DNA-binding domain	MA20_05735	-	-	-	-	-	-	-	-	-	-	-	HTH_34
SX1_k127_2912337_4	1297865.APJD01000003_gene6328	2.662e-205	642.0	COG0601@1|root,COG0601@2|Bacteria,1MU8Z@1224|Proteobacteria,2TQKK@28211|Alphaproteobacteria,3JQUZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Binding-protein-dependent transport system inner membrane component	MA20_22705	-	-	ko:K02033	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
SX1_k127_2912337_5	1230476.C207_02798	1.063e-183	575.0	COG1173@1|root,COG1173@2|Bacteria,1MW3R@1224|Proteobacteria,2TUCW@28211|Alphaproteobacteria,3JR9I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	N-terminal TM domain of oligopeptide transport permease C	MA20_22700	-	-	ko:K02034	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1,OppC_N
SX1_k127_2912337_1	1297865.APJD01000003_gene6330	0.0	1176.0	COG1123@1|root,COG4172@2|Bacteria,1MU09@1224|Proteobacteria,2TQP0@28211|Alphaproteobacteria,3JQQ8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the ABC transporter superfamily	MA20_22695	-	-	ko:K02031,ko:K02032	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
SX1_k127_2912337_9	1297865.APJD01000003_gene6331	1.736e-31	124.0	292PA@1|root,2ZQ74@2|Bacteria,1N74X@1224|Proteobacteria,2UF8C@28211|Alphaproteobacteria,3K0Y7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF4089)	MA20_22690	-	-	-	-	-	-	-	-	-	-	-	DUF4089
SX1_k127_2912337_3	1297865.APJD01000003_gene6332	2.539e-289	893.0	COG0154@1|root,COG0154@2|Bacteria,1MUVQ@1224|Proteobacteria,2TU3V@28211|Alphaproteobacteria,3JRDY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Amidase	MA20_22685	-	3.5.1.84,6.3.5.6,6.3.5.7	ko:K02433,ko:K19837	ko00791,ko00970,ko01100,ko01120,map00791,map00970,map01100,map01120	-	R03905,R04212,R05563	RC00010,RC01287	ko00000,ko00001,ko01000,ko03029	-	-	-	Amidase
SX1_k127_2912337_8	1297865.APJD01000003_gene6333	4.96e-79	269.0	COG4319@1|root,COG4319@2|Bacteria,1RD4M@1224|Proteobacteria,2UA09@28211|Alphaproteobacteria,3JY8P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3225)	MA20_22680	-	-	-	-	-	-	-	-	-	-	-	DUF3225
SX1_k127_2912337_6	1297865.APJD01000003_gene6334	6.264e-150	475.0	COG1802@1|root,COG1802@2|Bacteria,1RBIC@1224|Proteobacteria,2U60T@28211|Alphaproteobacteria,3JUSB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FCD	MA20_22675	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SX1_k127_2912337_2	1297865.APJD01000003_gene6335	0.0	1127.0	COG0154@1|root,COG0154@2|Bacteria,1MUVQ@1224|Proteobacteria,2TR00@28211|Alphaproteobacteria,3JVVN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Amidase	MA20_22670	-	3.5.1.54	ko:K01457	ko00220,ko00791,ko01100,ko01120,map00220,map00791,map01100,map01120	-	R00005	RC02756	ko00000,ko00001,ko01000	-	-	-	Amidase
SX1_k127_2912337_7	1297865.APJD01000003_gene6336	8.25e-105	342.0	COG1846@1|root,COG1846@2|Bacteria,1N7PQ@1224|Proteobacteria,2UF5S@28211|Alphaproteobacteria,3JRI5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SX1_k127_2912337_0	1297865.APJD01000003_gene6337	0.0	1193.0	COG0318@1|root,COG0318@2|Bacteria,1MUQZ@1224|Proteobacteria,2TRV7@28211|Alphaproteobacteria,3JSE9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme	-	-	6.2.1.34	ko:K12508	-	-	-	-	ko00000,ko01000	-	-	-	AMP-binding
SX1_k127_2914189_7	172088.AUGA01000007_gene8402	1.413e-46	168.0	COG0254@1|root,COG0254@2|Bacteria,1MZ69@1224|Proteobacteria,2UBSC@28211|Alphaproteobacteria,3K03V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	50S ribosomal protein L31	rpmE	-	-	ko:K02909	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L31
SX1_k127_2914189_1	398525.KB900701_gene653	0.0	1126.0	COG1132@1|root,COG1132@2|Bacteria,1MUBM@1224|Proteobacteria,2TQMR@28211|Alphaproteobacteria,3JU3Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	ABC transporter	msbA2	-	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
SX1_k127_2914189_6	1297865.APJD01000036_gene1392	2.127e-77	265.0	2A3T8@1|root,30SB4@2|Bacteria,1MYTP@1224|Proteobacteria,2UAW3@28211|Alphaproteobacteria,3JZKR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2914189_5	1297865.APJD01000036_gene1393	1.513e-119	386.0	COG2249@1|root,COG2249@2|Bacteria,1MXFT@1224|Proteobacteria,2VER2@28211|Alphaproteobacteria,3K454@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Flavodoxin-like fold	-	-	1.6.5.2	ko:K00355,ko:K11748	ko00130,ko01110,ko05200,ko05225,ko05418,map00130,map01110,map05200,map05225,map05418	-	R02964,R03643,R03816	RC00819	ko00000,ko00001,ko01000,ko02000	2.A.37.1.2	-	-	Flavodoxin_2
SX1_k127_2914189_4	1297865.APJD01000036_gene1394	4.013e-186	582.0	COG0583@1|root,COG0583@2|Bacteria,1N663@1224|Proteobacteria,2TRAK@28211|Alphaproteobacteria,3JUEZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_2914189_2	1297865.APJD01000036_gene1395	0.0	997.0	COG3653@1|root,COG3653@2|Bacteria,1MWWY@1224|Proteobacteria,2TT5E@28211|Alphaproteobacteria,3JRMI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Amidohydrolase family	MA20_04810	-	3.5.1.82	ko:K01461	-	-	-	-	ko00000,ko01000	-	-	-	Amidohydro_3
SX1_k127_2914189_3	1297865.APJD01000036_gene1396	3.416e-189	593.0	COG0523@1|root,COG0523@2|Bacteria,1MVXC@1224|Proteobacteria,2TU5Y@28211|Alphaproteobacteria,3JVAY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Cobalamin synthesis protein cobW C-terminal domain	-	-	-	ko:K02234	-	-	-	-	ko00000,ko00001	-	-	-	CobW_C,cobW
SX1_k127_2914189_0	1297865.APJD01000036_gene1397	0.0	1180.0	COG4774@1|root,COG4774@2|Bacteria,1MV0X@1224|Proteobacteria,2TRX3@28211|Alphaproteobacteria,3JT0F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TonB-dependent Receptor Plug Domain	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SX1_k127_2929560_0	1297865.APJD01000006_gene4585	4.468e-314	962.0	COG1233@1|root,COG1233@2|Bacteria,1MV2R@1224|Proteobacteria,2TSR0@28211|Alphaproteobacteria,3JUVV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Flavin containing amine oxidoreductase	MA20_01895	-	-	-	-	-	-	-	-	-	-	-	Amino_oxidase
SX1_k127_2929560_4	1297865.APJD01000006_gene4584	5.095e-17	81.0	COG3847@1|root,COG3847@2|Bacteria	2|Bacteria	U	Flp Fap pilin component	flp1	-	-	ko:K02651	ko04112,map04112	-	-	-	ko00000,ko00001,ko02035,ko02044	-	-	-	Flp_Fap
SX1_k127_2929560_1	1297865.APJD01000006_gene4583	8.962e-178	558.0	COG2264@1|root,COG2264@2|Bacteria,1MUPC@1224|Proteobacteria,2TTP3@28211|Alphaproteobacteria,3JR3H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Ribosomal protein L11 methyltransferase	prmA	-	-	ko:K02687	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PrmA
SX1_k127_2929560_2	1297865.APJD01000006_gene4582	3.604e-110	363.0	COG0727@1|root,COG0727@2|Bacteria,1RJ0V@1224|Proteobacteria,2U8AG@28211|Alphaproteobacteria,3JYN2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PFAM Uncharacterised protein family (UPF0153)	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2929560_3	1297865.APJD01000006_gene4581	9.775e-29	115.0	2AEA5@1|root,3144C@2|Bacteria,1N943@1224|Proteobacteria,2UI3X@28211|Alphaproteobacteria,3K11M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2933311_4	1297865.APJD01000049_gene5503	5.718e-23	98.0	COG0583@1|root,COG0583@2|Bacteria,1MUWX@1224|Proteobacteria,2TU0X@28211|Alphaproteobacteria,3JVPS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_2933311_3	748727.CLJU_c38450	1.524e-42	167.0	COG3493@1|root,COG3493@2|Bacteria,1TR97@1239|Firmicutes,24BDA@186801|Clostridia,36GMZ@31979|Clostridiaceae	186801|Clostridia	C	2-hydroxycarboxylate transporter family	citP	-	-	ko:K11616	ko02020,map02020	-	-	-	ko00000,ko00001	2.A.24.2	-	-	2HCT
SX1_k127_2933311_0	1297865.APJD01000049_gene5506	9.169e-172	550.0	COG1804@1|root,COG1804@2|Bacteria,1MU2K@1224|Proteobacteria,2TR7Q@28211|Alphaproteobacteria,3JTSN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA-transferase family III	-	-	-	-	-	-	-	-	-	-	-	-	CoA_transf_3
SX1_k127_2933311_1	1297865.APJD01000049_gene5505	7.096e-169	543.0	COG2301@1|root,COG2301@2|Bacteria,1MW0A@1224|Proteobacteria,2TRN5@28211|Alphaproteobacteria,3JW4D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	C-C_Bond_Lyase of the TIM-Barrel fold	-	-	4.1.3.34	ko:K01644	ko02020,map02020	-	R00362	RC00067,RC01118	ko00000,ko00001,ko01000	-	-	-	HpcH_HpaI
SX1_k127_2933311_2	1297865.APJD01000049_gene5504	2.875e-113	366.0	COG3493@1|root,COG3493@2|Bacteria,1NKCA@1224|Proteobacteria,2TUQ0@28211|Alphaproteobacteria,3JXJA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	2-hydroxycarboxylate transporter family	-	-	-	-	-	-	-	-	-	-	-	-	2HCT
SX1_k127_2933693_4	1297865.APJD01000009_gene2870	2.772e-89	296.0	COG1663@1|root,COG1663@2|Bacteria,1MU8G@1224|Proteobacteria,2TTZ4@28211|Alphaproteobacteria,3JS77@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA)	lpxK	-	2.7.1.130	ko:K00912	ko00540,ko01100,map00540,map01100	M00060	R04657	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	LpxK
SX1_k127_2933693_0	1297865.APJD01000009_gene2871	4.496e-275	849.0	COG1519@1|root,COG1519@2|Bacteria,1MU9F@1224|Proteobacteria,2TS37@28211|Alphaproteobacteria,3JTXY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)	kdtA	-	2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15	ko:K02527	ko00540,ko01100,map00540,map01100	M00060,M00080	R04658,R05074,R09763	RC00009,RC00077,RC00247	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT30	-	Glycos_transf_N
SX1_k127_2933693_2	1297865.APJD01000009_gene2872	4.279e-151	481.0	COG2121@1|root,COG2121@2|Bacteria,1MZID@1224|Proteobacteria,2TSGQ@28211|Alphaproteobacteria,3JT7J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF374)	MA20_05800	-	-	ko:K09778	-	-	-	-	ko00000	-	-	-	DUF374
SX1_k127_2933693_5	1230476.C207_03487	6.896e-49	175.0	COG0483@1|root,COG0483@2|Bacteria,1N7D7@1224|Proteobacteria,2UF6T@28211|Alphaproteobacteria,3K0ED@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Domain of unknown function (DUF4170)	MA20_05805	-	-	-	-	-	-	-	-	-	-	-	DUF4170
SX1_k127_2933693_3	1380355.JNIJ01000015_gene5855	3.437e-128	413.0	COG0483@1|root,COG0483@2|Bacteria,1MV4W@1224|Proteobacteria,2TV4R@28211|Alphaproteobacteria,3JRF8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Inositol monophosphatase	suhB2	-	3.1.3.25	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	M00131	R01185,R01186,R01187	RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	Inositol_P
SX1_k127_2933693_1	1297865.APJD01000009_gene2875	8.968e-194	608.0	COG0312@1|root,COG0312@2|Bacteria,1MUVW@1224|Proteobacteria,2TSAV@28211|Alphaproteobacteria,3JR0G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative modulator of DNA gyrase	pmbA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564	-	ko:K03592	-	-	-	-	ko00000,ko01002	-	-	-	PmbA_TldD
SX1_k127_2948665_4	1297865.APJD01000019_gene3108	2.002e-89	295.0	COG1475@1|root,COG1475@2|Bacteria,1MW2E@1224|Proteobacteria,2TSTN@28211|Alphaproteobacteria,3JTGY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Belongs to the ParB family	parB	-	-	ko:K03497	-	-	-	-	ko00000,ko03000,ko03036,ko04812	-	-	-	ParBc
SX1_k127_2948665_1	1297865.APJD01000019_gene3109	5.154e-213	662.0	COG1466@1|root,COG1466@2|Bacteria,1R8PA@1224|Proteobacteria,2U1KQ@28211|Alphaproteobacteria,3JQWA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DNA polymerase III, delta' subunit	holA	-	2.7.7.7	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta
SX1_k127_2948665_3	172088.AUGA01000016_gene2489	1.588e-94	312.0	COG5468@1|root,COG5468@2|Bacteria,1MXDR@1224|Proteobacteria,2TUMW@28211|Alphaproteobacteria,3JTPX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Lipopolysaccharide-assembly	-	-	-	ko:K03643	-	-	-	-	ko00000,ko02000	1.B.42.1	-	-	LptE
SX1_k127_2948665_0	1297865.APJD01000019_gene3111	0.0	1814.0	COG0495@1|root,COG0495@2|Bacteria,1MV47@1224|Proteobacteria,2TQPK@28211|Alphaproteobacteria,3JRM8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the class-I aminoacyl-tRNA synthetase family	leuS	GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.4	ko:K01869	ko00970,map00970	M00359,M00360	R03657	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	Anticodon_1,tRNA-synt_1,tRNA-synt_1_2
SX1_k127_2948665_2	1297865.APJD01000019_gene3112	3.872e-202	629.0	COG0457@1|root,COG0457@2|Bacteria	1297865.APJD01000019_gene3112|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2949582_0	1297865.APJD01000005_gene4008	0.0	3455.0	COG3210@1|root,COG3210@2|Bacteria,1MXIP@1224|Proteobacteria,2TTVB@28211|Alphaproteobacteria,3JV1M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	TIGRFAM filamentous haemagglutinin family outer membrane protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF3739,Haemagg_act
SX1_k127_2950957_0	1297865.APJD01000012_gene1314	3.047e-249	770.0	COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,2TQQ7@28211|Alphaproteobacteria,3JRMV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the thiolase family	phbA	-	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
SX1_k127_2950957_6	1230476.C207_06975	8.148e-147	466.0	COG1028@1|root,COG1028@2|Bacteria,1MUEV@1224|Proteobacteria,2TRCF@28211|Alphaproteobacteria,3JQSI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	phbB	-	1.1.1.36	ko:K00023	ko00630,ko00650,ko01120,ko01200,map00630,map00650,map01120,map01200	M00373	R01779,R01977	RC00103,RC00117	ko00000,ko00001,ko00002,ko01000	-	-	-	adh_short_C2
SX1_k127_2950957_1	1297865.APJD01000012_gene1316	9.846e-174	546.0	COG0697@1|root,COG0697@2|Bacteria,1MVGC@1224|Proteobacteria,2TS6Y@28211|Alphaproteobacteria,3JV1U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	MA20_39610	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_2950957_7	1297865.APJD01000012_gene1317	7.563e-94	312.0	COG3542@1|root,COG3542@2|Bacteria,1RHBE@1224|Proteobacteria,2U962@28211|Alphaproteobacteria,3JYGA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Cupin superfamily (DUF985)	MA20_39615	-	-	ko:K09705	-	-	-	-	ko00000	-	-	-	Cupin_5
SX1_k127_2950957_2	1297865.APJD01000012_gene1318	6.466e-166	523.0	COG0491@1|root,COG0491@2|Bacteria,1MU8Q@1224|Proteobacteria,2TSVS@28211|Alphaproteobacteria,3JRGJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid	gloB	-	3.1.2.6	ko:K01069	ko00620,map00620	-	R01736	RC00004,RC00137	ko00000,ko00001,ko01000	-	-	-	HAGH_C,Lactamase_B
SX1_k127_2950957_3	1297865.APJD01000012_gene1319	1.393e-161	515.0	COG0500@1|root,COG2226@2|Bacteria,1NA7K@1224|Proteobacteria,2TT7T@28211|Alphaproteobacteria,3JT80@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Methyltransferase domain	MA20_39625	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
SX1_k127_2950957_8	114615.BRADO3920	3.196e-06	50.0	COG4953@1|root,COG4953@2|Bacteria,1MUA9@1224|Proteobacteria,2TR2R@28211|Alphaproteobacteria,3JS2X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Penicillin-Binding Protein C-terminus Family	pbpC	-	2.4.1.129	ko:K05367	ko00550,map00550	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	BiPBP_C,Transgly,Transpeptidase
SX1_k127_2950957_5	1297865.APJD01000012_gene1320	1.89e-147	469.0	COG5373@1|root,COG5373@2|Bacteria,1N7JV@1224|Proteobacteria,2TR7A@28211|Alphaproteobacteria,3JRVV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF4167)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4167
SX1_k127_2950957_4	1297865.APJD01000012_gene1321	2.781e-161	508.0	COG2890@1|root,COG2890@2|Bacteria,1MXCQ@1224|Proteobacteria,2TZFK@28211|Alphaproteobacteria,3JUFB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif	prmC	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564	2.1.1.297	ko:K02493	-	-	R10806	RC00003,RC03279	ko00000,ko01000,ko03012	-	-	-	MTS,Methyltransf_31
SX1_k127_2952710_4	1297865.APJD01000014_gene800	1.823e-214	677.0	COG1262@1|root,COG1262@2|Bacteria,1NQ5K@1224|Proteobacteria,2U2VJ@28211|Alphaproteobacteria,3JTPW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Sulfatase-modifying factor enzyme 1	-	-	-	-	-	-	-	-	-	-	-	-	FGE-sulfatase,Guanylate_cyc
SX1_k127_2952710_6	1297865.APJD01000014_gene801	3.732e-63	218.0	2ER0Q@1|root,33IK9@2|Bacteria,1MYRX@1224|Proteobacteria,2U8DE@28211|Alphaproteobacteria,3JZ7C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	T3SS negative regulator,GrlR	-	-	-	-	-	-	-	-	-	-	-	-	GrlR
SX1_k127_2952710_3	1297865.APJD01000014_gene802	2.87e-227	707.0	COG0477@1|root,COG2814@2|Bacteria,1MU9G@1224|Proteobacteria,2TSPI@28211|Alphaproteobacteria,3JUG5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	-	-	-	ko:K19577	-	-	-	-	ko00000,ko02000	2.A.1.2.65	-	-	MFS_1
SX1_k127_2952710_2	1297865.APJD01000014_gene803	1.516e-268	831.0	COG3904@1|root,COG3904@2|Bacteria,1QG8N@1224|Proteobacteria,2U1HA@28211|Alphaproteobacteria,3JUJS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PeriplasmiC protein	-	-	-	-	-	-	-	-	-	-	-	-	CLP_protease
SX1_k127_2952710_0	1230476.C207_01776	0.0	1385.0	COG0441@1|root,COG0441@2|Bacteria,1MUP2@1224|Proteobacteria,2TQWI@28211|Alphaproteobacteria,3JRSX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)	thrS	-	6.1.1.3	ko:K01868	ko00970,map00970	M00359,M00360	R03663	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,TGS,tRNA-synt_2b,tRNA_SAD
SX1_k127_2952710_5	398525.KB900701_gene5840	2.45e-121	390.0	COG0778@1|root,COG0778@2|Bacteria,1PKUV@1224|Proteobacteria,2U5MZ@28211|Alphaproteobacteria,3JRWH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Nitroreductase family	MA20_31560	-	-	-	-	-	-	-	-	-	-	-	Nitroreductase
SX1_k127_2952710_1	1297865.APJD01000014_gene806	0.0	1311.0	COG2202@1|root,COG5001@1|root,COG2202@2|Bacteria,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,3JQV4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Diguanylate cyclase	MA20_31570	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,MHYT,PAS_4,PAS_7,PAS_8
SX1_k127_2956665_7	644966.Tmar_0389	0.0002564	48.0	COG4877@1|root,COG4877@2|Bacteria,1VEY1@1239|Firmicutes,24VQC@186801|Clostridia	186801|Clostridia	S	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	RHH_5
SX1_k127_2956665_2	1297865.APJD01000007_gene1907	1.119e-207	650.0	COG0330@1|root,COG0330@2|Bacteria,1P8ZI@1224|Proteobacteria,2TTBE@28211|Alphaproteobacteria	28211|Alphaproteobacteria	O	membrane	-	-	-	-	-	-	-	-	-	-	-	-	Band_7
SX1_k127_2956665_3	1297865.APJD01000007_gene1908	4.53e-152	484.0	COG0265@1|root,COG0265@2|Bacteria,1RBPQ@1224|Proteobacteria,2U5UY@28211|Alphaproteobacteria,3JYER@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Trypsin-like peptidase domain	-	-	-	-	-	-	-	-	-	-	-	-	Trypsin_2
SX1_k127_2956665_4	1297865.APJD01000007_gene1909	1.438e-90	299.0	2E4EJ@1|root,32Z9S@2|Bacteria,1RGPF@1224|Proteobacteria,2U8HF@28211|Alphaproteobacteria,3JZ91@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2956665_6	1297865.APJD01000007_gene1910	2.66e-36	138.0	29ZCB@1|root,30MAY@2|Bacteria,1N6XB@1224|Proteobacteria,2UF9M@28211|Alphaproteobacteria,3K0WJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2956665_0	1297865.APJD01000007_gene1911	0.0	1471.0	COG4774@1|root,COG4774@2|Bacteria,1MVZD@1224|Proteobacteria,2TS4K@28211|Alphaproteobacteria,3JR1J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	siderophore receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SX1_k127_2956665_5	1297865.APJD01000007_gene1912	6.092e-41	152.0	2ER7K@1|root,33IT6@2|Bacteria,1NJD4@1224|Proteobacteria,2UK4M@28211|Alphaproteobacteria,3K1QR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2956665_1	1297865.APJD01000007_gene1913	0.0	1044.0	COG3182@1|root,COG3182@2|Bacteria,1MVET@1224|Proteobacteria,2TVHW@28211|Alphaproteobacteria,3JXKP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PepSY-associated TM region	-	-	-	-	-	-	-	-	-	-	-	-	PepSY_TM
SX1_k127_2957422_0	1429916.X566_00765	0.0	1598.0	COG0553@1|root,COG0827@1|root,COG4646@1|root,COG0553@2|Bacteria,COG0827@2|Bacteria,COG4646@2|Bacteria,1PGZG@1224|Proteobacteria,2TVEU@28211|Alphaproteobacteria,3JVU9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DEAD-like helicases superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Helicase_C,N6_Mtase,ResIII,SNF2_N
SX1_k127_2957961_1	883078.HMPREF9695_04902	4.411e-25	104.0	28XTK@1|root,2ZJQ1@2|Bacteria,1MZJV@1224|Proteobacteria,2UCH0@28211|Alphaproteobacteria,3K0N7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized small protein (DUF2158)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2158
SX1_k127_2957961_0	883078.HMPREF9695_04901	0.0	1795.0	COG1204@1|root,COG4249@1|root,COG1204@2|Bacteria,COG4249@2|Bacteria,1MW4Z@1224|Proteobacteria,2V1SH@28211|Alphaproteobacteria,3JXXC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	DEAD,Helicase_C,Peptidase_C14
SX1_k127_2967359_9	404589.Anae109_0554	1.401e-05	47.0	2D22U@1|root,32TC0@2|Bacteria,1MWUI@1224|Proteobacteria	1224|Proteobacteria	S	Tripartite tricarboxylate transporter TctB family	-	-	-	-	-	-	-	-	-	-	-	-	TctB
SX1_k127_2967359_2	290397.Adeh_2248	1.305e-234	734.0	COG3333@1|root,COG3333@2|Bacteria,1MUKR@1224|Proteobacteria,42M32@68525|delta/epsilon subdivisions,2WJA4@28221|Deltaproteobacteria	28221|Deltaproteobacteria	S	Tripartite tricarboxylate transporter TctA family	-	-	-	ko:K07793	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.80.1	-	-	TctA
SX1_k127_2967359_3	398525.KB900701_gene6621	6.541e-198	623.0	COG3181@1|root,COG3181@2|Bacteria,1MW18@1224|Proteobacteria,2TSKY@28211|Alphaproteobacteria,3JSS0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter family receptor	MA20_02275	-	-	-	-	-	-	-	-	-	-	-	TctC
SX1_k127_2967359_5	1297865.APJD01000006_gene4633	4.376e-180	565.0	COG0207@1|root,COG0207@2|Bacteria,1MUBD@1224|Proteobacteria,2TQSB@28211|Alphaproteobacteria,3JV7Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis	thyA	-	2.1.1.45	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	M00053	R02101	RC00219,RC00332	ko00000,ko00001,ko00002,ko01000	-	-	-	Thymidylat_synt
SX1_k127_2967359_7	1297865.APJD01000006_gene4634	4.208e-97	336.0	COG0454@1|root,COG0454@2|Bacteria,1QTZ4@1224|Proteobacteria,2U7E4@28211|Alphaproteobacteria,3JV2E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FR47-like protein	MA20_02285	-	2.3.1.57	ko:K00657	ko00330,ko01100,ko04216,map00330,map01100,map04216	M00135	R01154	RC00004,RC00096	ko00000,ko00001,ko00002,ko01000	-	-	-	Acetyltransf_1
SX1_k127_2967359_6	1297865.APJD01000006_gene4635	1.857e-103	344.0	COG0262@1|root,COG0262@2|Bacteria,1RH0P@1224|Proteobacteria,2U9GC@28211|Alphaproteobacteria,3JQWH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis	folA	-	1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000	-	-	-	DHFR_1
SX1_k127_2967359_1	1230476.C207_03369	2.333e-236	733.0	COG0330@1|root,COG0330@2|Bacteria,1MUM2@1224|Proteobacteria,2TRTP@28211|Alphaproteobacteria,3JVAF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	HflC and HflK could encode or regulate a protease	hflK	-	-	ko:K04088	-	M00742	-	-	ko00000,ko00002,ko01000	-	-	-	Band_7,HflK_N
SX1_k127_2967359_4	1297865.APJD01000006_gene4638	9.496e-183	574.0	COG0330@1|root,COG0330@2|Bacteria,1MV7R@1224|Proteobacteria,2TRP4@28211|Alphaproteobacteria,3JR4X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	HflC and HflK could regulate a protease	hflC	-	-	ko:K04087	-	M00742	-	-	ko00000,ko00002,ko01000	-	-	-	Band_7
SX1_k127_2967359_8	1230476.C207_03367	8.221e-33	127.0	COG3242@1|root,COG3242@2|Bacteria,1NGPZ@1224|Proteobacteria,2UJA9@28211|Alphaproteobacteria,3K19V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized protein conserved in bacteria (DUF2065)	MA20_02305	-	-	ko:K09937	-	-	-	-	ko00000	-	-	-	DUF2065
SX1_k127_2967359_0	1297865.APJD01000006_gene4640	2.241e-304	937.0	COG0265@1|root,COG0265@2|Bacteria,1MU63@1224|Proteobacteria,2TQPZ@28211|Alphaproteobacteria,3JQXM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the peptidase S1C family	degP	GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564	3.4.21.107	ko:K04771	ko01503,ko02020,map01503,map02020	M00728	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	-	-	-	PDZ,PDZ_2,Trypsin_2
SX1_k127_2971565_0	1297865.APJD01000016_gene3397	8.41e-317	973.0	COG3333@1|root,COG3333@2|Bacteria,1MUKR@1224|Proteobacteria,2TR4Q@28211|Alphaproteobacteria,3JT7G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter TctA family	MA20_43210	-	-	ko:K07793	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.80.1	-	-	TctA
SX1_k127_2971565_4	1297865.APJD01000016_gene3396	3.105e-108	352.0	2BKYI@1|root,32FF5@2|Bacteria,1MY1A@1224|Proteobacteria,2U1KI@28211|Alphaproteobacteria,3JRGN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter TctB family	-	-	-	-	-	-	-	-	-	-	-	-	TctB
SX1_k127_2971565_1	1297865.APJD01000016_gene3395	3.974e-237	737.0	COG0182@1|root,COG0182@2|Bacteria,1MUPM@1224|Proteobacteria,2TSPP@28211|Alphaproteobacteria,3JQQS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)	mtnA	-	5.3.1.23	ko:K08963	ko00270,ko01100,map00270,map01100	M00034	R04420	RC01151	ko00000,ko00001,ko00002,ko01000	-	-	-	IF-2B
SX1_k127_2971565_3	1297865.APJD01000016_gene3394	3.581e-187	588.0	COG0005@1|root,COG0005@2|Bacteria,1MUWW@1224|Proteobacteria,2TSN3@28211|Alphaproteobacteria,3JS3B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates	mtnP	-	2.4.2.28	ko:K00772	ko00270,ko01100,map00270,map01100	M00034	R01402	RC00063,RC02819	ko00000,ko00001,ko00002,ko01000	-	-	-	PNP_UDP_1
SX1_k127_2971565_2	1230476.C207_01227	1.296e-205	640.0	COG3181@1|root,COG3181@2|Bacteria,1MXEX@1224|Proteobacteria,2TT5Y@28211|Alphaproteobacteria,3JUU2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter family receptor	MA20_43200	-	-	-	-	-	-	-	-	-	-	-	TctC
SX1_k127_2979848_5	1297865.APJD01000023_gene1077	1.99e-187	585.0	COG1804@1|root,COG1804@2|Bacteria,1MWPB@1224|Proteobacteria,2U1YE@28211|Alphaproteobacteria,3JS2K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA-transferase family III	MA20_04610	-	2.8.3.16	ko:K07749	-	-	-	-	ko00000,ko01000	-	-	-	CoA_transf_3
SX1_k127_2979848_9	1297865.APJD01000023_gene1078	3.542e-146	464.0	COG0625@1|root,COG0625@2|Bacteria,1REDI@1224|Proteobacteria,2TR9W@28211|Alphaproteobacteria,3JUD0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, C-terminal domain	MA20_04615	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_2,GST_N,GST_N_3
SX1_k127_2979848_14	1297865.APJD01000023_gene1079	1.286e-23	100.0	29EED@1|root,31564@2|Bacteria,1NCQC@1224|Proteobacteria,2UGVT@28211|Alphaproteobacteria,3K15R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2979848_0	1297865.APJD01000023_gene1080	0.0	1054.0	28Q2A@1|root,2ZCKB@2|Bacteria,1MY0Q@1224|Proteobacteria,2U0CB@28211|Alphaproteobacteria,3JRUJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2979848_4	1297865.APJD01000023_gene1081	2.211e-188	592.0	COG4223@1|root,COG4223@2|Bacteria,1MW1G@1224|Proteobacteria,2TVKB@28211|Alphaproteobacteria,3JRNP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	DZ	transferase activity, transferring acyl groups other than amino-acyl groups	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2979848_13	1297865.APJD01000023_gene1082	1.02e-69	239.0	COG0664@1|root,COG0664@2|Bacteria,1RDJV@1224|Proteobacteria,2U73G@28211|Alphaproteobacteria,3JYP3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Cyclic nucleotide-monophosphate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	cNMP_binding
SX1_k127_2979848_8	1297865.APJD01000023_gene1083	6.554e-173	548.0	COG0491@1|root,COG0491@2|Bacteria,1N6PM@1224|Proteobacteria,2TRZ4@28211|Alphaproteobacteria,3JSCF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
SX1_k127_2979848_10	1297865.APJD01000023_gene1084	4.918e-137	436.0	COG0625@1|root,COG0625@2|Bacteria,1Q05U@1224|Proteobacteria,2TTDK@28211|Alphaproteobacteria,3JVWD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	GST_C,GST_C_2,GST_N,GST_N_3
SX1_k127_2979848_1	1297865.APJD01000023_gene1085	4.961e-276	852.0	COG0477@1|root,COG0477@2|Bacteria,1MU46@1224|Proteobacteria,2TQVP@28211|Alphaproteobacteria,3JRB3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	-	-	-	ko:K03762	-	-	-	-	ko00000,ko02000	2.A.1.6.4	-	-	MFS_1,Sugar_tr
SX1_k127_2979848_12	1297865.APJD01000023_gene1086	2.397e-105	345.0	COG3762@1|root,COG3762@2|Bacteria,1R61N@1224|Proteobacteria,2U5XG@28211|Alphaproteobacteria,3JUPW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	TPM domain	-	-	-	ko:K08988	-	-	-	-	ko00000	-	-	-	TPM_phosphatase
SX1_k127_2979848_7	1297865.APJD01000023_gene1087	3.992e-173	547.0	COG1512@1|root,COG1512@2|Bacteria,1PB41@1224|Proteobacteria,2TUVD@28211|Alphaproteobacteria,3JSS7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	TPM domain	-	-	-	ko:K06872	-	-	-	-	ko00000	-	-	-	TPM_phosphatase
SX1_k127_2979848_11	1297865.APJD01000023_gene1088	1.272e-126	407.0	COG1704@1|root,COG1704@2|Bacteria,1MVH0@1224|Proteobacteria,2TRJR@28211|Alphaproteobacteria,3JTSH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	LemA family	lemA	-	-	ko:K03744	-	-	-	-	ko00000	-	-	-	LemA
SX1_k127_2979848_6	1297865.APJD01000023_gene1089	3.487e-184	596.0	COG1024@1|root,COG1024@2|Bacteria,1R3U7@1224|Proteobacteria,2TV9G@28211|Alphaproteobacteria,3JU2F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	MA20_04645	-	4.2.1.17	ko:K01692	ko00071,ko00280,ko00281,ko00310,ko00360,ko00362,ko00380,ko00410,ko00627,ko00640,ko00650,ko00903,ko00930,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00310,map00360,map00362,map00380,map00410,map00627,map00640,map00650,map00903,map00930,map01100,map01110,map01120,map01130,map01212	M00032,M00087	R03026,R03045,R04137,R04170,R04204,R04224,R04738,R04740,R04744,R04746,R04749,R05595,R06411,R06412,R06942,R08093	RC00831,RC00834,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
SX1_k127_2979848_3	1297865.APJD01000023_gene1090	5.383e-236	734.0	COG1960@1|root,COG1960@2|Bacteria,1MUBH@1224|Proteobacteria,2TSKH@28211|Alphaproteobacteria,3JST4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_2979848_2	1297865.APJD01000023_gene1091	3.446e-263	811.0	COG1960@1|root,COG1960@2|Bacteria,1MVJC@1224|Proteobacteria,2TQRA@28211|Alphaproteobacteria,3JU4G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, middle domain	MA20_04655	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_2985690_1	1297865.APJD01000013_gene1276	8.741e-162	521.0	COG1593@1|root,COG1593@2|Bacteria,1MU0F@1224|Proteobacteria,2TQNK@28211|Alphaproteobacteria,3JR38@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Tripartite ATP-independent periplasmic transporter, DctM component	-	-	-	-	-	-	-	-	-	-	-	-	DctM
SX1_k127_2985690_3	1297865.APJD01000013_gene1275	3.594e-104	340.0	COG3090@1|root,COG3090@2|Bacteria,1NGAA@1224|Proteobacteria,2U49Y@28211|Alphaproteobacteria,3JWKJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Tripartite ATP-independent periplasmic transporters, DctQ component	-	-	-	-	-	-	-	-	-	-	-	-	DctQ
SX1_k127_2985690_0	1297865.APJD01000013_gene1274	3.08e-216	672.0	COG1638@1|root,COG1638@2|Bacteria,1MVHI@1224|Proteobacteria,2TTYB@28211|Alphaproteobacteria,3JRHG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Bacterial extracellular solute-binding protein, family 7	-	-	-	-	-	-	-	-	-	-	-	-	DctP
SX1_k127_2985690_2	1297865.APJD01000013_gene1273	1.064e-114	370.0	COG0642@1|root,COG2205@2|Bacteria,1NFY3@1224|Proteobacteria,2TSQR@28211|Alphaproteobacteria,3JTDH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain	MA20_06300	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
SX1_k127_2988519_9	1297865.APJD01000012_gene1301	3.533e-19	86.0	COG4249@1|root,COG4249@2|Bacteria,1MXFD@1224|Proteobacteria,2TRW5@28211|Alphaproteobacteria,3JQPH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14
SX1_k127_2988519_5	1297865.APJD01000012_gene1302	1.6e-135	432.0	COG4291@1|root,COG4291@2|Bacteria,1RGUF@1224|Proteobacteria,2TRCQ@28211|Alphaproteobacteria,3JS4S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1345)	MA20_23190	-	-	-	-	-	-	-	-	-	-	-	DUF1345
SX1_k127_2988519_2	1297865.APJD01000012_gene1303	8.385e-186	585.0	COG0142@1|root,COG0142@2|Bacteria,1MWNG@1224|Proteobacteria,2TR79@28211|Alphaproteobacteria,3JTEJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Belongs to the FPP GGPP synthase family	ispA	GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009536,GO:0009842,GO:0009987,GO:0016114,GO:0016740,GO:0016765,GO:0019637,GO:0033385,GO:0033386,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0090407,GO:1901576	2.5.1.1,2.5.1.10	ko:K00795	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00364	R01658,R02003	RC00279	ko00000,ko00001,ko00002,ko01000,ko01006	-	-	-	polyprenyl_synt
SX1_k127_2988519_4	1297865.APJD01000012_gene1304	5.216e-136	434.0	COG0744@1|root,COG0744@2|Bacteria,1RDAQ@1224|Proteobacteria,2U0NP@28211|Alphaproteobacteria,3JR05@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors	mtgA	-	2.4.1.129	ko:K03814	ko00550,map00550	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly
SX1_k127_2988519_8	1230476.C207_03747	2.788e-29	125.0	COG0333@1|root,COG0333@2|Bacteria,1PU3Y@1224|Proteobacteria,2UF54@28211|Alphaproteobacteria,3K11R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the bacterial ribosomal protein bL32 family	rpmF	-	-	ko:K02911	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	-	-	-	Ribosomal_L32p
SX1_k127_2988519_6	1297865.APJD01000012_gene1306	4.31e-116	375.0	2E6XE@1|root,331GU@2|Bacteria,1N7WP@1224|Proteobacteria,2UG23@28211|Alphaproteobacteria,3JU4T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2988519_7	1297865.APJD01000012_gene1307	1.236e-54	192.0	2ACTQ@1|root,312EK@2|Bacteria,1N3H8@1224|Proteobacteria,2UDFE@28211|Alphaproteobacteria,3K054@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2988519_0	1297865.APJD01000012_gene1308	0.0	1119.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2UP6H@28211|Alphaproteobacteria,3K6M6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Putative diguanylate phosphodiesterase	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,PAS_3
SX1_k127_2988519_1	1297865.APJD01000012_gene1309	2.069e-195	611.0	COG0583@1|root,COG0583@2|Bacteria,1PX1B@1224|Proteobacteria,2TUE7@28211|Alphaproteobacteria,3JV4U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_2988519_3	1297865.APJD01000012_gene1310	1.852e-139	443.0	COG0625@1|root,COG0625@2|Bacteria,1RA4Y@1224|Proteobacteria,2U5B6@28211|Alphaproteobacteria,3JWH3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, N-terminal domain	maiA	-	5.2.1.2	ko:K01800	ko00350,ko00643,ko01100,ko01120,map00350,map00643,map01100,map01120	M00044	R03181	RC00867	ko00000,ko00001,ko00002,ko01000	-	-	-	GST_C_3,GST_N,GST_N_3
SX1_k127_2990644_4	1297865.APJD01000036_gene1479	4.405e-108	351.0	COG0457@1|root,COG4249@1|root,COG0457@2|Bacteria,COG4249@2|Bacteria,1MXFD@1224|Proteobacteria,2TRW5@28211|Alphaproteobacteria,3JR0X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14,Sel1,TPR_1,TPR_11,TPR_16,TPR_2,TPR_8
SX1_k127_2990644_3	1297865.APJD01000036_gene1480	7.517e-131	417.0	COG3703@1|root,COG3703@2|Bacteria,1QA7D@1224|Proteobacteria,2U7C6@28211|Alphaproteobacteria,3JSG9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides	chaC	-	-	ko:K07232	-	-	-	-	ko00000	-	-	-	ChaC
SX1_k127_2990644_1	1297865.APJD01000036_gene1481	5.948e-255	788.0	COG4093@1|root,COG4093@2|Bacteria,1MXJA@1224|Proteobacteria,2TRH7@28211|Alphaproteobacteria,3JTXX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized protein conserved in bacteria (DUF2125)	MA20_20440	-	-	-	-	-	-	-	-	-	-	-	DUF2125
SX1_k127_2990644_0	1297865.APJD01000036_gene1482	0.0	1046.0	COG4238@1|root,COG4238@2|Bacteria,1QW4X@1224|Proteobacteria,2TSTZ@28211|Alphaproteobacteria,3JWV2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	major outer membrane lipoprotein	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_2990644_2	1297865.APJD01000036_gene1483	1.093e-210	656.0	COG3181@1|root,COG3181@2|Bacteria,1QU33@1224|Proteobacteria,2U3PU@28211|Alphaproteobacteria,3JSZW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter family receptor	MA20_34395	-	-	-	-	-	-	-	-	-	-	-	TctC
SX1_k127_2994355_0	1297865.APJD01000014_gene780	0.0	1793.0	COG3696@1|root,COG3696@2|Bacteria,1NUIV@1224|Proteobacteria,2TRWM@28211|Alphaproteobacteria,3JRIE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K07787	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.6.1.4	-	-	ACR_tran
SX1_k127_2994355_1	1297865.APJD01000014_gene781	7.764e-241	746.0	COG0845@1|root,COG0845@2|Bacteria,1MVAS@1224|Proteobacteria,2TTGG@28211|Alphaproteobacteria,3JTB0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	cusB	-	-	ko:K07798	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.6.1.4,8.A.1	-	-	CusF_Ec,HlyD_D23,HlyD_D4
SX1_k127_2997221_1	1297865.APJD01000006_gene4418	6.985e-102	332.0	2DMMM@1|root,32SHA@2|Bacteria,1N257@1224|Proteobacteria,2TRFF@28211|Alphaproteobacteria,3JVIR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	ABM
SX1_k127_2997221_0	1230476.C207_07102	3.748e-180	566.0	COG0493@1|root,COG1143@1|root,COG0493@2|Bacteria,COG1143@2|Bacteria,1MU2H@1224|Proteobacteria,2TQK5@28211|Alphaproteobacteria,3JSD0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster	MA20_01050	-	1.17.1.10	ko:K15022	ko00680,ko00720,ko01120,ko01200,map00680,map00720,map01120,map01200	M00377	R00134	RC02796	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer4_20,Fer4_7,NADH_4Fe-4S,Pyr_redox_2,Pyr_redox_3
SX1_k127_2997695_0	1297865.APJD01000007_gene1775	1.655e-257	796.0	COG2271@1|root,COG2271@2|Bacteria,1MUEK@1224|Proteobacteria,2U3VK@28211|Alphaproteobacteria,3JVR9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_2997695_1	1297865.APJD01000007_gene1776	2.047e-191	598.0	COG0583@1|root,COG0583@2|Bacteria,1MXRP@1224|Proteobacteria,2U4RZ@28211|Alphaproteobacteria,3JVV4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_3009319_10	1297865.APJD01000009_gene2711	1.346e-66	229.0	COG3156@1|root,COG3156@2|Bacteria,1RE7R@1224|Proteobacteria,2U72M@28211|Alphaproteobacteria,3JYYI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Type II secretion system (T2SS), protein K	-	-	-	-	-	-	-	-	-	-	-	-	T2SSK
SX1_k127_3009319_0	1297865.APJD01000009_gene2710	0.0	1152.0	COG2804@1|root,COG2804@2|Bacteria,1MU7V@1224|Proteobacteria,2TRMU@28211|Alphaproteobacteria,3JWI2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	Type II secretion system (T2SS), protein E, N-terminal domain	gspE	-	-	ko:K02454	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	T2SSE,T2SSE_N
SX1_k127_3009319_1	1297865.APJD01000009_gene2709	1.564e-252	784.0	COG1459@1|root,COG1459@2|Bacteria,1MV4U@1224|Proteobacteria,2TV76@28211|Alphaproteobacteria,3JWE7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	Type II secretion system (T2SS), protein F	-	-	-	ko:K02455,ko:K02653	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02035,ko02044	3.A.15,3.A.15.2	-	-	T2SSF
SX1_k127_3009319_8	1297865.APJD01000009_gene2708	3.013e-77	263.0	COG4970@1|root,COG4970@2|Bacteria,1NBWI@1224|Proteobacteria,2UIPM@28211|Alphaproteobacteria,3K0SJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	Type II transport protein GspH	-	-	-	ko:K02457	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	GspH,N_methyl
SX1_k127_3009319_9	1297865.APJD01000009_gene2707	2.781e-69	245.0	COG4967@1|root,COG4967@2|Bacteria,1NDAK@1224|Proteobacteria,2UGVP@28211|Alphaproteobacteria	28211|Alphaproteobacteria	NU	type IV pilus modification protein PilV	-	-	-	-	-	-	-	-	-	-	-	-	N_methyl
SX1_k127_3009319_3	1297865.APJD01000009_gene2706	8.545e-128	419.0	COG4968@1|root,COG4968@2|Bacteria	2|Bacteria	NU	Prokaryotic N-terminal methylation motif	-	-	-	ko:K02456,ko:K02457,ko:K02458,ko:K02459,ko:K02655,ko:K10926	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02035,ko02044	3.A.15,3.A.15.2	-	-	ComP_DUS,N_methyl,T2SSJ
SX1_k127_3009319_2	1297865.APJD01000009_gene2705	3.553e-185	585.0	COG3166@1|root,COG3166@2|Bacteria,1PPB3@1224|Proteobacteria,2UD3Y@28211|Alphaproteobacteria,3JYVA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	Fimbrial assembly protein (PilN)	-	-	-	ko:K02461	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	PilN
SX1_k127_3009319_6	1297865.APJD01000009_gene2704	4.851e-111	361.0	2DN8Z@1|root,32W63@2|Bacteria,1MZFH@1224|Proteobacteria,2UE3N@28211|Alphaproteobacteria,3K0P3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Type II secretion system (T2SS), protein M subtype b	-	-	-	ko:K02462	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	T2SSM_b
SX1_k127_3009319_5	1297865.APJD01000009_gene2703	5.765e-113	368.0	2E9H8@1|root,333QC@2|Bacteria,1NDDU@1224|Proteobacteria,2UITT@28211|Alphaproteobacteria,3K1M4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3009319_4	1297865.APJD01000009_gene2702	2.636e-125	404.0	COG1989@1|root,COG1989@2|Bacteria,1PNQR@1224|Proteobacteria,2UBNI@28211|Alphaproteobacteria,3JYIT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NOU	Type IV leader peptidase family	-	-	3.4.23.43	ko:K02654	-	M00331	-	-	ko00000,ko00002,ko01000,ko01002,ko02035,ko02044	3.A.15.2	-	-	Peptidase_A24
SX1_k127_3009319_7	1297865.APJD01000009_gene2701	4.603e-82	274.0	2DH9H@1|root,2ZYVW@2|Bacteria,1PMPC@1224|Proteobacteria,2V099@28211|Alphaproteobacteria,3K0U6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	VanZ
SX1_k127_3010473_0	1380355.JNIJ01000014_gene473	2.015e-101	332.0	COG0755@1|root,COG0755@2|Bacteria,1MU61@1224|Proteobacteria,2TSW8@28211|Alphaproteobacteria,3JRN5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes	ccmC	GO:0001539,GO:0002048,GO:0002049,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005575,GO:0005623,GO:0005886,GO:0006518,GO:0006629,GO:0006643,GO:0006664,GO:0006807,GO:0006810,GO:0006928,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009237,GO:0009247,GO:0009636,GO:0009987,GO:0015886,GO:0016020,GO:0016209,GO:0016491,GO:0016684,GO:0019184,GO:0019290,GO:0019748,GO:0034641,GO:0040011,GO:0042221,GO:0043043,GO:0043107,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044464,GO:0044550,GO:0046467,GO:0048870,GO:0050896,GO:0051179,GO:0051181,GO:0051186,GO:0051188,GO:0051234,GO:0051674,GO:0051716,GO:0055114,GO:0070887,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0071973,GO:0071975,GO:0071977,GO:0071978,GO:0097237,GO:0097588,GO:0098754,GO:0098869,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901678,GO:1903509,GO:1990748	-	ko:K02195	ko02010,map02010	M00259	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.107	-	-	Cytochrom_C_asm
SX1_k127_3010473_1	1187851.A33M_2838	4.288e-93	319.0	COG2386@1|root,COG2386@2|Bacteria,1NJB0@1224|Proteobacteria,2TUSG@28211|Alphaproteobacteria,3FD4B@34008|Rhodovulum	28211|Alphaproteobacteria	U	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes	ccmB	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016021,GO:0031224,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351	-	ko:K02194	ko02010,map02010	M00259	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.107	-	-	CcmB
SX1_k127_3010473_2	1187851.A33M_2837	7.522e-71	244.0	COG4133@1|root,COG4133@2|Bacteria,1MZPC@1224|Proteobacteria,2TVBT@28211|Alphaproteobacteria,3FD7Z@34008|Rhodovulum	28211|Alphaproteobacteria	O	once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system	ccmA	-	3.6.3.41	ko:K02193	ko02010,map02010	M00259	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.107	-	-	ABC_tran
SX1_k127_3011288_2	1297865.APJD01000032_gene1630	7.738e-132	420.0	COG1409@1|root,COG1409@2|Bacteria,1RHP4@1224|Proteobacteria,2U9B6@28211|Alphaproteobacteria,3K0V6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Calcineurin-like phosphoesterase	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos
SX1_k127_3011288_0	1297865.APJD01000032_gene1631	2.563e-280	861.0	COG2072@1|root,COG2072@2|Bacteria,1MWPJ@1224|Proteobacteria,2TSQA@28211|Alphaproteobacteria,3JT1R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Pyridine nucleotide-disulphide oxidoreductase	-	-	-	ko:K07222	-	-	-	-	ko00000	-	-	-	Pyr_redox_3
SX1_k127_3011288_5	1297865.APJD01000032_gene1632	7.259e-38	142.0	2ACSU@1|root,312DP@2|Bacteria,1N3G2@1224|Proteobacteria,2UDXK@28211|Alphaproteobacteria,3K06D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_05300	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3011288_4	1297865.APJD01000032_gene1633	1.051e-39	151.0	2ADD4@1|root,3132V@2|Bacteria,1N5CC@1224|Proteobacteria,2UDAK@28211|Alphaproteobacteria,3K0E5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3011288_3	1297865.APJD01000032_gene1634	3.906e-47	170.0	2BRXR@1|root,32KY0@2|Bacteria,1NM45@1224|Proteobacteria,2UNH8@28211|Alphaproteobacteria,3K1ZB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3011288_1	1297865.APJD01000032_gene1635	2.822e-235	731.0	COG0556@1|root,COG0556@2|Bacteria,1MUFK@1224|Proteobacteria,2TQSP@28211|Alphaproteobacteria,3JR4I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage	uvrB	-	-	ko:K03702	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	Helicase_C,ResIII,UVR,UvrB
SX1_k127_3027509_7	1297865.APJD01000018_gene5732	2.689e-162	513.0	COG1024@1|root,COG1024@2|Bacteria,1MVQN@1224|Proteobacteria,2TUXD@28211|Alphaproteobacteria,3JSP8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	enoyl-CoA hydratase	-	-	5.3.3.18	ko:K15866	ko00360,ko01120,map00360,map01120	-	R09837,R09839	RC00004,RC00326,RC02689,RC03003	ko00000,ko00001,ko01000	-	-	-	ECH_1
SX1_k127_3027509_4	1297865.APJD01000018_gene5733	3.385e-206	642.0	COG2207@1|root,COG2207@2|Bacteria,1R4HX@1224|Proteobacteria,2U6XY@28211|Alphaproteobacteria,3JV2I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding_2,HTH_18
SX1_k127_3027509_5	1297865.APJD01000018_gene5734	6.903e-206	641.0	COG2207@1|root,COG2207@2|Bacteria,1R4HX@1224|Proteobacteria,2U6XY@28211|Alphaproteobacteria,3JV2I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding_2,HTH_18
SX1_k127_3027509_10	1297865.APJD01000018_gene5735	1.774e-104	346.0	COG1917@1|root,COG1917@2|Bacteria,1P5AF@1224|Proteobacteria,2UWP1@28211|Alphaproteobacteria,3K5BD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Cupin	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
SX1_k127_3027509_9	1297865.APJD01000018_gene5736	5.954e-105	345.0	COG0500@1|root,COG0500@2|Bacteria	2|Bacteria	Q	methyltransferase activity	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_25
SX1_k127_3027509_3	1297865.APJD01000018_gene5737	2.446e-224	696.0	COG3693@1|root,COG3693@2|Bacteria,1P7A6@1224|Proteobacteria,2TT8P@28211|Alphaproteobacteria,3JX5V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Domain of unknown function (DUF4424)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4424
SX1_k127_3027509_0	1297865.APJD01000018_gene5738	2.438e-259	802.0	COG1960@1|root,COG1960@2|Bacteria,1MXMQ@1224|Proteobacteria,2U0CV@28211|Alphaproteobacteria,3JX3A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	1.14.13.235	ko:K22027	-	-	-	-	ko00000,ko01000	-	-	-	Acyl-CoA_dh_2,Acyl-CoA_dh_N
SX1_k127_3027509_1	1297865.APJD01000018_gene5739	1.1e-245	762.0	COG2334@1|root,COG2334@2|Bacteria,1R27Y@1224|Proteobacteria,2UK4N@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Phosphotransferase enzyme family	-	-	-	-	-	-	-	-	-	-	-	-	APH
SX1_k127_3027509_2	1230476.C207_00151	1.006e-234	728.0	COG0683@1|root,COG0683@2|Bacteria,1MWJ1@1224|Proteobacteria,2TT0T@28211|Alphaproteobacteria,3JWGZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	braC	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_3027509_6	1297865.APJD01000018_gene5741	6.192e-198	620.0	arCOG11957@1|root,2Z84N@2|Bacteria,1QIVS@1224|Proteobacteria,2U486@28211|Alphaproteobacteria,3K3JA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3027509_11	398525.KB900701_gene7457	2.635e-76	257.0	COG3791@1|root,COG3791@2|Bacteria,1PSHT@1224|Proteobacteria,2VANH@28211|Alphaproteobacteria,3K4DU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Glutathione-dependent formaldehyde-activating enzyme	-	-	-	-	-	-	-	-	-	-	-	-	GFA
SX1_k127_3027509_8	1297865.APJD01000018_gene5743	2.827e-118	381.0	COG1309@1|root,COG1309@2|Bacteria,1R679@1224|Proteobacteria,2TRSA@28211|Alphaproteobacteria,3JUJW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_3027509_12	1297865.APJD01000018_gene5744	3.003e-59	205.0	COG2329@1|root,COG2329@2|Bacteria,1NDM8@1224|Proteobacteria,2UG48@28211|Alphaproteobacteria,3JZNB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Antibiotic biosynthesis monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	ydhR
SX1_k127_3035200_3	1297865.APJD01000003_gene6139	3.61e-80	267.0	COG0477@1|root,COG2814@2|Bacteria,1QWJJ@1224|Proteobacteria,2TWZP@28211|Alphaproteobacteria,3JSYC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	MA20_22870	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_3035200_1	1297865.APJD01000003_gene6140	3.331e-146	463.0	COG0625@1|root,COG0625@2|Bacteria,1REDI@1224|Proteobacteria,2TR9W@28211|Alphaproteobacteria,3JVAC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, C-terminal domain	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_2,GST_N,GST_N_3
SX1_k127_3035200_4	258594.RPA0628	7.952e-06	49.0	COG3409@1|root,COG5480@1|root,COG3409@2|Bacteria,COG5480@2|Bacteria,1P9ZA@1224|Proteobacteria,2TSTF@28211|Alphaproteobacteria,3JVQW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Protein of unknown function (DUF1036)	MA20_21840	-	-	-	-	-	-	-	-	-	-	-	DUF1036,PG_binding_1
SX1_k127_3035200_0	1297865.APJD01000003_gene6141	0.0	1169.0	COG3653@1|root,COG3653@2|Bacteria,1MWWY@1224|Proteobacteria,2TSZZ@28211|Alphaproteobacteria,3JV0V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Amidohydrolase family	MA20_22865	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_3
SX1_k127_3035200_2	1297865.APJD01000003_gene6142	4.81e-90	296.0	COG0038@1|root,COG0517@1|root,COG0038@2|Bacteria,COG0517@2|Bacteria,1MV4K@1224|Proteobacteria,2TTBG@28211|Alphaproteobacteria,3JWMQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Voltage gated chloride channel	-	-	-	ko:K03281	-	-	-	-	ko00000	2.A.49	-	-	CBS,Voltage_CLC
SX1_k127_3039442_5	1297865.APJD01000010_gene4951	2.415e-116	375.0	COG1247@1|root,COG1247@2|Bacteria,1RDHN@1224|Proteobacteria,2U98I@28211|Alphaproteobacteria,3JUN3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Acetyltransferase (GNAT) domain	-	-	2.3.1.183	ko:K03823	ko00440,ko01130,map00440,map01130	-	R08871,R08938	RC00004,RC00064	ko00000,ko00001,ko01000	-	-	-	Acetyltransf_4
SX1_k127_3039442_3	1297865.APJD01000010_gene4952	9.006e-242	752.0	COG0477@1|root,COG2814@2|Bacteria,1MUXC@1224|Proteobacteria,2TRR7@28211|Alphaproteobacteria,3JVCK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_3039442_2	1230476.C207_05766	3.61e-300	923.0	COG0624@1|root,COG0624@2|Bacteria,1MWJS@1224|Proteobacteria,2TUHT@28211|Alphaproteobacteria,3K2FM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Peptidase family M28	-	-	-	-	-	-	-	-	-	-	-	-	M20_dimer,Peptidase_M20,Peptidase_M28
SX1_k127_3039442_6	1297865.APJD01000010_gene4954	1.626e-106	361.0	COG3812@1|root,COG3812@2|Bacteria,1RGUV@1224|Proteobacteria,2U9BA@28211|Alphaproteobacteria,3K2GU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF1993)	-	-	-	ko:K09983	-	-	-	-	ko00000	-	-	-	DUF1993
SX1_k127_3039442_1	1297865.APJD01000010_gene4955	2.582e-308	953.0	COG0477@1|root,COG2814@2|Bacteria,1QTYE@1224|Proteobacteria,2TWZ3@28211|Alphaproteobacteria,3JREM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_3039442_8	391595.RLO149_c020630	1.418e-38	158.0	COG0583@1|root,COG0583@2|Bacteria,1PX1B@1224|Proteobacteria,2TUE7@28211|Alphaproteobacteria,2P3PM@2433|Roseobacter	28211|Alphaproteobacteria	K	COG0583 Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_3039442_4	1297865.APJD01000010_gene4957	4.82e-204	636.0	COG0583@1|root,COG0583@2|Bacteria,1MVKF@1224|Proteobacteria,2U0G8@28211|Alphaproteobacteria,3JX6W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	hexA	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_3039442_0	1297865.APJD01000010_gene4958	6.061e-318	978.0	COG0477@1|root,COG0477@2|Bacteria,1MX9T@1224|Proteobacteria,2VF11@28211|Alphaproteobacteria,3JXBD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_3039442_7	1297865.APJD01000010_gene4959	3.243e-91	300.0	COG1917@1|root,COG1917@2|Bacteria,1RCXV@1224|Proteobacteria,2U6MY@28211|Alphaproteobacteria,3JYZJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF861)	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
SX1_k127_3053091_8	1297865.APJD01000014_gene643	2.089e-13	71.0	COG0346@1|root,COG0346@2|Bacteria,1RH4D@1224|Proteobacteria,2U7GX@28211|Alphaproteobacteria,3JYQ4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
SX1_k127_3053091_1	1297865.APJD01000014_gene644	0.0	1068.0	COG0119@1|root,COG0119@2|Bacteria,1MUNQ@1224|Proteobacteria,2TSK4@28211|Alphaproteobacteria,3JUJJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the alpha-IPM synthase homocitrate synthase family	MA20_26350	-	2.3.3.13	ko:K01649	ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230	M00432	R01213	RC00004,RC00470,RC02754	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	HMGL-like,LeuA_dimer
SX1_k127_3053091_5	1297865.APJD01000014_gene645	8.295e-98	332.0	COG0454@1|root,COG0454@2|Bacteria,1QUD7@1224|Proteobacteria,2U5MN@28211|Alphaproteobacteria,3JV1B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Acetyltransferase (GNAT) domain	-	-	-	ko:K03830	-	-	-	-	ko00000,ko01000	-	-	-	Acetyltransf_10
SX1_k127_3053091_2	1297865.APJD01000014_gene646	2.847e-315	965.0	COG0215@1|root,COG0215@2|Bacteria,1MV8H@1224|Proteobacteria,2TQQ1@28211|Alphaproteobacteria,3JSIG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the class-I aminoacyl-tRNA synthetase family	cysS	GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576	6.1.1.16	ko:K01883	ko00970,map00970	M00359,M00360	R03650	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DALR_2,tRNA-synt_1e
SX1_k127_3053091_7	1297865.APJD01000014_gene647	2.294e-62	215.0	2EAPA@1|root,334RR@2|Bacteria,1N1K3@1224|Proteobacteria,2UDBG@28211|Alphaproteobacteria,3K0EP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3053091_4	1297865.APJD01000014_gene648	4.006e-229	713.0	2CKRE@1|root,32SCW@2|Bacteria,1MWRU@1224|Proteobacteria,2TSRM@28211|Alphaproteobacteria,3JQVC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2865)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2865
SX1_k127_3053091_0	1297865.APJD01000014_gene649	0.0	1165.0	COG0171@1|root,COG0388@1|root,COG0171@2|Bacteria,COG0388@2|Bacteria,1MU9U@1224|Proteobacteria,2TRAU@28211|Alphaproteobacteria,3JSE7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source	nadE	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.1.5,6.3.5.1	ko:K01916,ko:K01950	ko00760,ko01100,map00760,map01100	M00115	R00189,R00257	RC00010,RC00100	ko00000,ko00001,ko00002,ko01000	-	-	-	CN_hydrolase,NAD_synthase
SX1_k127_3053091_6	1297865.APJD01000014_gene650	4.704e-64	220.0	COG0818@1|root,COG0818@2|Bacteria,1MZ3Q@1224|Proteobacteria,2U9IE@28211|Alphaproteobacteria,3JYQQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Recycling of diacylglycerol produced during the turnover of membrane phospholipid	dgkA	-	2.7.1.107	ko:K00901	ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00561,map00564,map01100,map01110,map04070,map04072,map05231	-	R02240	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	DAGK_prokar
SX1_k127_3053091_3	1297865.APJD01000014_gene651	6.592e-259	797.0	COG3200@1|root,COG3200@2|Bacteria,1MUWF@1224|Proteobacteria,2TR0E@28211|Alphaproteobacteria,3JUF8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	phospho-2-dehydro-3-deoxyheptonate aldolase	aroF	GO:0003674,GO:0003824,GO:0003849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009507,GO:0009536,GO:0009611,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019438,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0050896,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.5.1.54	ko:K01626	ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024	M00022	R01826	RC00435	ko00000,ko00001,ko00002,ko01000	-	-	-	DAHP_synth_2
SX1_k127_3056338_7	1297865.APJD01000018_gene5772	2.958e-178	559.0	COG2207@1|root,COG2207@2|Bacteria,1MUV5@1224|Proteobacteria,2TS27@28211|Alphaproteobacteria,3JQSG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,Cupin_2,HTH_18
SX1_k127_3056338_5	1297865.APJD01000018_gene5771	5.557e-203	634.0	COG0559@1|root,COG0559@2|Bacteria,1MVND@1224|Proteobacteria,2TSCF@28211|Alphaproteobacteria,3JQTN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	MA20_13915	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_3056338_3	1297865.APJD01000018_gene5770	3.889e-230	714.0	COG4177@1|root,COG4177@2|Bacteria,1PA94@1224|Proteobacteria,2TSNM@28211|Alphaproteobacteria,3JS22@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	-	-	-	ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_3056338_13	1123239.KB898633_gene2977	4.137e-54	200.0	COG0411@1|root,COG0411@2|Bacteria,1TR0P@1239|Firmicutes,4HASG@91061|Bacilli	91061|Bacilli	E	COG0411 ABC-type branched-chain amino acid transport systems, ATPase component	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_3056338_1	1297865.APJD01000018_gene5768	0.0	1462.0	COG0410@1|root,COG5441@1|root,COG0410@2|Bacteria,COG5441@2|Bacteria,1MX45@1224|Proteobacteria,2TUHA@28211|Alphaproteobacteria,3JUZ3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Uncharacterised protein family (UPF0261)	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran,UPF0261
SX1_k127_3056338_8	1230476.C207_00179	8.97e-170	534.0	COG5564@1|root,COG5564@2|Bacteria,1MXTY@1224|Proteobacteria,2TSJ2@28211|Alphaproteobacteria,3JSJJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Phosphoenolpyruvate hydrolase-like	MA20_13935	-	-	-	-	-	-	-	-	-	-	-	PEP_hydrolase
SX1_k127_3056338_0	1297865.APJD01000018_gene5766	0.0	1670.0	COG2268@1|root,COG2268@2|Bacteria,1P50K@1224|Proteobacteria,2TTVY@28211|Alphaproteobacteria,3JTXC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Flotillin	MA20_13940	-	-	-	-	-	-	-	-	-	-	-	Band_7,Flot
SX1_k127_3056338_11	398525.KB900701_gene7433	4.699e-95	311.0	COG2867@1|root,COG2867@2|Bacteria,1QW7G@1224|Proteobacteria,2TWR8@28211|Alphaproteobacteria,3JS86@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Polyketide cyclase / dehydrase and lipid transport	QU41_28450	-	-	-	-	-	-	-	-	-	-	-	Polyketide_cyc2
SX1_k127_3056338_12	1297865.APJD01000018_gene5764	1.284e-94	312.0	COG3427@1|root,COG3427@2|Bacteria,1R54K@1224|Proteobacteria,2U1PE@28211|Alphaproteobacteria,3JXIM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Polyketide cyclase / dehydrase and lipid transport	-	-	-	-	-	-	-	-	-	-	-	-	Polyketide_cyc2
SX1_k127_3056338_9	1297865.APJD01000018_gene5763	3.974e-163	524.0	COG1319@1|root,COG1319@2|Bacteria,1NZ7M@1224|Proteobacteria,2TWR9@28211|Alphaproteobacteria,3JTRM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CO dehydrogenase flavoprotein C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	CO_deh_flav_C,FAD_binding_5
SX1_k127_3056338_10	1297865.APJD01000018_gene5762	1.337e-100	330.0	COG2080@1|root,COG2080@2|Bacteria,1MWA6@1224|Proteobacteria,2TS73@28211|Alphaproteobacteria,3JV5C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	[2Fe-2S] binding domain	MA20_13960	-	1.2.5.3,1.3.7.9	ko:K03518,ko:K04107	ko00362,ko00627,ko01100,ko01120,ko01220,map00362,map00627,map01100,map01120,map01220	-	R05316,R11168	RC00490,RC02800	ko00000,ko00001,ko01000	-	-	-	Fer2,Fer2_2
SX1_k127_3056338_2	1297865.APJD01000018_gene5761	0.0	1069.0	COG1529@1|root,COG1529@2|Bacteria,1NNFR@1224|Proteobacteria,2TVHX@28211|Alphaproteobacteria,3JV7H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain	MA20_13965	-	-	-	-	-	-	-	-	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2
SX1_k127_3056338_4	1297865.APJD01000018_gene5760	1.219e-224	698.0	COG1529@1|root,COG1529@2|Bacteria,1NPGE@1224|Proteobacteria,2TTCC@28211|Alphaproteobacteria,3JTHK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Molybdopterin-binding domain of aldehyde dehydrogenase	MA20_13970	-	-	-	-	-	-	-	-	-	-	-	Ald_Xan_dh_C2
SX1_k127_3056338_6	1297865.APJD01000018_gene5759	7.273e-182	570.0	COG0714@1|root,COG0714@2|Bacteria,1NWIN@1224|Proteobacteria,2TTPB@28211|Alphaproteobacteria,3JVNF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	AAA domain (dynein-related subfamily)	MA20_13975	-	-	-	-	-	-	-	-	-	-	-	AAA_5
SX1_k127_3056338_14	1297865.APJD01000018_gene5758	2.309e-14	81.0	COG3552@1|root,COG3552@2|Bacteria,1MUEJ@1224|Proteobacteria,2TQQT@28211|Alphaproteobacteria,3JVY4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	VWA domain containing CoxE-like protein	-	-	-	ko:K07161	-	-	-	-	ko00000	-	-	-	VWA_CoxE
SX1_k127_305646_2	1297865.APJD01000014_gene941	2.134e-113	377.0	COG0411@1|root,COG0411@2|Bacteria,1MUTY@1224|Proteobacteria,2TQK1@28211|Alphaproteobacteria,3JS3Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ABC transporter	braF	GO:0003333,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0015711,GO:0015803,GO:0015804,GO:0015807,GO:0015808,GO:0015818,GO:0015829,GO:0015849,GO:0015893,GO:0032328,GO:0034220,GO:0042221,GO:0042493,GO:0042940,GO:0042941,GO:0043090,GO:0046942,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0089718,GO:0098655,GO:0098656,GO:0098657,GO:0098739,GO:1902475,GO:1903714,GO:1903785,GO:1903805,GO:1903806,GO:1903825,GO:1905039	3.5.4.44	ko:K01995,ko:K15783	ko00260,ko01100,ko02010,ko02024,map00260,map01100,map02010,map02024	M00237	R09800	RC02661	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_305646_0	1297865.APJD01000014_gene940	8.647e-280	862.0	COG4177@1|root,COG4177@2|Bacteria,1MV66@1224|Proteobacteria,2TSJQ@28211|Alphaproteobacteria,3JQQ9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	livM	-	-	ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2,DUF3382
SX1_k127_305646_1	1297865.APJD01000014_gene939	1.401e-182	572.0	COG0559@1|root,COG0559@2|Bacteria,1MU25@1224|Proteobacteria,2TSDS@28211|Alphaproteobacteria,3JT5S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	livH	GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015175,GO:0015179,GO:0015188,GO:0015190,GO:0015192,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015820,GO:0015823,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0043090,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0089718,GO:0098655,GO:0098656,GO:0098657,GO:0098713,GO:0098739,GO:1902475,GO:1903714,GO:1903785,GO:1903825,GO:1905039	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_305646_3	1297865.APJD01000014_gene938	6.256e-98	321.0	2A47B@1|root,30SSI@2|Bacteria,1MUTD@1224|Proteobacteria,2U347@28211|Alphaproteobacteria,3JVQY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_305646_4	1157708.KB907468_gene82	1.836e-30	122.0	COG0599@1|root,COG0599@2|Bacteria,1RDSG@1224|Proteobacteria,2WEXV@28216|Betaproteobacteria,4AJPR@80864|Comamonadaceae	28216|Betaproteobacteria	S	Carboxymuconolactone decarboxylase family	-	-	4.1.1.44	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	-	R03470	RC00938	ko00000,ko00001,ko01000	-	-	-	CMD
SX1_k127_3058263_12	1297865.APJD01000014_gene546	1.598e-73	248.0	COG0183@1|root,COG0183@2|Bacteria,1MU8C@1224|Proteobacteria,2TS6P@28211|Alphaproteobacteria,3JT7E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the thiolase family	MA20_27240	-	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
SX1_k127_3058263_11	1297865.APJD01000014_gene547	7.282e-124	409.0	COG0800@1|root,COG0800@2|Bacteria,1MUVJ@1224|Proteobacteria,2TUMH@28211|Alphaproteobacteria,3JSEV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	KDPG and KHG aldolase	MA20_27235	-	4.1.2.14,4.1.3.42	ko:K01625	ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200	M00008,M00061,M00308,M00631	R00470,R05605	RC00307,RC00308,RC00435	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldolase
SX1_k127_3058263_6	1297865.APJD01000014_gene548	1.78e-196	623.0	COG0524@1|root,COG0524@2|Bacteria,1MVG2@1224|Proteobacteria,2TSDV@28211|Alphaproteobacteria,3JTDI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	pfkB family carbohydrate kinase	kdgK	-	2.7.1.45	ko:K00874	ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200	M00061,M00308,M00631	R01541	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	PfkB
SX1_k127_3058263_3	1297865.APJD01000014_gene549	6.268e-213	663.0	COG0451@1|root,COG0451@2|Bacteria,1MU1A@1224|Proteobacteria,2TU1A@28211|Alphaproteobacteria,3JUUT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	3-beta hydroxysteroid dehydrogenase/isomerase family	MA20_27225	-	1.1.1.410	ko:K22025	-	-	-	-	ko00000,ko01000	-	-	-	Epimerase
SX1_k127_3058263_7	1297865.APJD01000014_gene550	2e-185	582.0	COG0395@1|root,COG0395@2|Bacteria,1N4I0@1224|Proteobacteria,2TT14@28211|Alphaproteobacteria,3JR2J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02026	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	BPD_transp_1
SX1_k127_3058263_5	1230476.C207_06515	9.209e-205	637.0	COG1175@1|root,COG1175@2|Bacteria,1MWB7@1224|Proteobacteria,2TUAN@28211|Alphaproteobacteria,3JS7K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02025	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	BPD_transp_1
SX1_k127_3058263_1	1297865.APJD01000014_gene552	2.233e-296	910.0	COG1653@1|root,COG1653@2|Bacteria,1MU64@1224|Proteobacteria,2TTUB@28211|Alphaproteobacteria,3JSQS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Bacterial extracellular solute-binding protein	-	-	-	ko:K02027	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	SBP_bac_8,TAT_signal
SX1_k127_3058263_2	1297865.APJD01000014_gene553	6.563e-232	718.0	COG3842@1|root,COG3842@2|Bacteria,1MU3I@1224|Proteobacteria,2TQQJ@28211|Alphaproteobacteria,3JTEF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the ABC transporter superfamily	MA20_27205	-	3.6.3.30	ko:K02010,ko:K10112	ko02010,map02010	M00190,M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00491,M00602,M00605,M00606	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.1,3.A.1.10	-	-	ABC_tran,TOBE,TOBE_2
SX1_k127_3058263_4	1297865.APJD01000014_gene554	4.828e-209	659.0	COG1609@1|root,COG1609@2|Bacteria,1MUEP@1224|Proteobacteria,2TQM4@28211|Alphaproteobacteria,3JSKW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn _helix lactose operon repressor	MA20_27200	-	-	ko:K06145	-	-	-	-	ko00000,ko03000	-	-	-	LacI,Peripla_BP_3
SX1_k127_3058263_0	1297865.APJD01000014_gene555	0.0	1281.0	COG0129@1|root,COG0129@2|Bacteria,1MV4I@1224|Proteobacteria,2TQRW@28211|Alphaproteobacteria,3JVG8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	Belongs to the IlvD Edd family	MA20_27195	-	4.2.1.82,4.2.1.9	ko:K01687,ko:K22186	ko00040,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00040,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R01209,R02429,R04441,R05070	RC00468,RC00543,RC01714	ko00000,ko00001,ko00002,ko01000	-	-	-	ILVD_EDD
SX1_k127_3058263_10	1297865.APJD01000014_gene556	4.974e-147	469.0	COG1028@1|root,COG1028@2|Bacteria,1MURZ@1224|Proteobacteria,2TQJ6@28211|Alphaproteobacteria,3JRV9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	MA20_27190	-	1.1.1.30	ko:K00019,ko:K18335	ko00051,ko00072,ko00650,ko01100,ko01120,map00051,map00072,map00650,map01100,map01120	M00088	R01361,R10690	RC00089,RC00117	ko00000,ko00001,ko00002,ko01000	-	-	-	adh_short_C2
SX1_k127_3058263_9	1297865.APJD01000014_gene557	3.008e-152	494.0	COG1028@1|root,COG1028@2|Bacteria,1MU2T@1224|Proteobacteria,2TSDG@28211|Alphaproteobacteria,3JT3N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	MA20_27185	-	1.1.1.401	ko:K21883	ko00051,ko01120,map00051,map01120	-	R11339	RC00089	ko00000,ko00001,ko01000	-	-	-	adh_short,adh_short_C2
SX1_k127_3058263_8	1297865.APJD01000014_gene558	3.974e-179	562.0	COG0583@1|root,COG0583@2|Bacteria,1PR6U@1224|Proteobacteria,2TUC6@28211|Alphaproteobacteria,3JW1Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Transcriptional regulator, LysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_3059702_4	1297865.APJD01000003_gene6350	1.87e-18	87.0	COG4177@1|root,COG4177@2|Bacteria,1MUPI@1224|Proteobacteria,2TSID@28211|Alphaproteobacteria,3JU2M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	MA20_22555	-	-	ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_3059702_1	1297865.APJD01000003_gene6349	9.049e-178	559.0	COG0559@1|root,COG0559@2|Bacteria,1MVND@1224|Proteobacteria,2TSCF@28211|Alphaproteobacteria,3JSV3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	MA20_22560	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_3059702_0	1230476.C207_02779	1.671e-252	782.0	COG0683@1|root,COG0683@2|Bacteria,1MVV2@1224|Proteobacteria,2TRFU@28211|Alphaproteobacteria,3JRAY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	MA20_22630	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_3059702_2	1297865.APJD01000003_gene6347	2.221e-112	366.0	2BSZA@1|root,32N37@2|Bacteria,1RBPC@1224|Proteobacteria,2U6DZ@28211|Alphaproteobacteria,3JYGX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF805
SX1_k127_3059702_3	1297865.APJD01000003_gene6346	1.432e-105	342.0	COG1595@1|root,COG1595@2|Bacteria,1R44W@1224|Proteobacteria,2U1R0@28211|Alphaproteobacteria,3JVBC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2,SnoaL_2
SX1_k127_3069748_3	1297865.APJD01000005_gene3517	6.552e-20	94.0	COG1173@1|root,COG1173@2|Bacteria,1MUG0@1224|Proteobacteria,2VETJ@28211|Alphaproteobacteria,3JRE7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	N-terminal TM domain of oligopeptide transport permease C	MA20_16780	-	-	ko:K02034	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1,OppC_N
SX1_k127_3069748_1	1297865.APJD01000005_gene3518	4.87e-192	600.0	COG0601@1|root,COG0601@2|Bacteria,1MU8Z@1224|Proteobacteria,2TR0N@28211|Alphaproteobacteria,3JUIB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Binding-protein-dependent transport system inner membrane component	MA20_16775	-	-	ko:K02033	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
SX1_k127_3069748_0	1297865.APJD01000005_gene3519	0.0	1005.0	COG0747@1|root,COG0747@2|Bacteria,1MUZH@1224|Proteobacteria,2TR1D@28211|Alphaproteobacteria,3JS99@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Bacterial extracellular solute-binding proteins, family 5 Middle	-	-	-	ko:K02035	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	SBP_bac_5
SX1_k127_3069748_2	1297865.APJD01000005_gene3520	6.044e-63	216.0	COG4608@1|root,COG4608@2|Bacteria,1NU4K@1224|Proteobacteria,2TQTV@28211|Alphaproteobacteria,3JRYC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the ABC transporter superfamily	-	-	-	ko:K02032,ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25	-	-	ABC_tran,oligo_HPY
SX1_k127_3092936_0	1297865.APJD01000033_gene6946	1.563e-188	591.0	COG2197@1|root,COG2197@2|Bacteria,1NXKF@1224|Proteobacteria,2U1K2@28211|Alphaproteobacteria,3JXQ7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,PAS_8,PAS_9
SX1_k127_3092936_2	1297865.APJD01000033_gene6945	4.38e-91	301.0	COG0782@1|root,COG0782@2|Bacteria,1RHU5@1224|Proteobacteria,2U95I@28211|Alphaproteobacteria,3JYH7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Transcription elongation factor, GreA/GreB, C-term	greB	-	-	-	-	-	-	-	-	-	-	-	GreA_GreB
SX1_k127_3092936_1	1297865.APJD01000033_gene6944	8.662e-129	412.0	COG1802@1|root,COG1802@2|Bacteria,1P2DT@1224|Proteobacteria,2TSI4@28211|Alphaproteobacteria,3JSII@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FCD	-	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SX1_k127_3092936_3	1297865.APJD01000033_gene6943	4.107e-09	57.0	COG0502@1|root,COG0502@2|Bacteria,1MVFF@1224|Proteobacteria,2TSD6@28211|Alphaproteobacteria,3JQNU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism	bioB	-	2.8.1.6	ko:K01012	ko00780,ko01100,map00780,map01100	M00123,M00573,M00577	R01078	RC00441	ko00000,ko00001,ko00002,ko01000	-	-	-	BATS,Radical_SAM
SX1_k127_3096921_4	1297865.APJD01000019_gene3333	1.076e-104	339.0	COG4993@1|root,COG4993@2|Bacteria,1MUQX@1224|Proteobacteria,2TQMV@28211|Alphaproteobacteria,3JSPM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	PQQ-like domain	gcd	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	1.1.5.2	ko:K00117	ko00030,ko01100,ko01110,ko01130,map00030,map01100,map01110,map01130	-	R06620	RC00066	ko00000,ko00001,ko01000	-	-	-	PQQ,PQQ_2
SX1_k127_3096921_1	1297865.APJD01000019_gene3332	2.009e-288	887.0	COG0443@1|root,COG0443@2|Bacteria,1MXBT@1224|Proteobacteria,2TS1I@28211|Alphaproteobacteria,3JS0W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Hsp70 protein	MA20_15110	-	-	ko:K04046	-	-	-	-	ko00000,ko03110	1.A.33	-	-	HSP70
SX1_k127_3096921_0	1297865.APJD01000019_gene3331	0.0	1013.0	COG0488@1|root,COG0488@2|Bacteria,1MV25@1224|Proteobacteria,2TSJ9@28211|Alphaproteobacteria,3JTSV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	ATPases associated with a variety of cellular activities	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran
SX1_k127_3096921_3	1297865.APJD01000019_gene3330	1.233e-129	419.0	COG0655@1|root,COG0655@2|Bacteria,1MW7N@1224|Proteobacteria,2TR4Z@28211|Alphaproteobacteria,3JXG3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	NADPH-dependent FMN reductase	-	-	-	-	-	-	-	-	-	-	-	-	FMN_red
SX1_k127_3096921_2	1297865.APJD01000019_gene3329	4.431e-188	588.0	COG1595@1|root,COG1595@2|Bacteria,1MXVA@1224|Proteobacteria,2TV85@28211|Alphaproteobacteria,3JR9S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Belongs to the sigma-70 factor family. ECF subfamily	sigJ	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
SX1_k127_3096921_5	1297865.APJD01000019_gene3328	3.442e-14	71.0	COG0454@1|root,COG0456@2|Bacteria,1N8ID@1224|Proteobacteria,2UJVI@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
SX1_k127_3098155_0	1297865.APJD01000009_gene2974	2.15e-297	915.0	COG0624@1|root,COG0624@2|Bacteria,1MW20@1224|Proteobacteria,2TTGM@28211|Alphaproteobacteria,3JT2B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Peptidase family M20/M25/M40	MA20_06185	-	-	-	-	-	-	-	-	-	-	-	M20_dimer,Peptidase_M20
SX1_k127_3098155_1	69279.BG36_14540	8.758e-06	48.0	COG0697@1|root,COG0697@2|Bacteria,1MXVF@1224|Proteobacteria,2TU7N@28211|Alphaproteobacteria,43J78@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_3104878_6	1297865.APJD01000010_gene5037	3.358e-09	58.0	2BN3X@1|root,32GQU@2|Bacteria,1NQB6@1224|Proteobacteria,2UJS1@28211|Alphaproteobacteria,3K1W5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3104878_5	1297865.APJD01000010_gene5038	7.085e-21	99.0	29FBR@1|root,3029E@2|Bacteria,1NPHC@1224|Proteobacteria,2UKTG@28211|Alphaproteobacteria,3K1SX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3104878_0	1297865.APJD01000010_gene5039	9.088e-266	820.0	COG2230@1|root,COG2230@2|Bacteria,1MX3U@1224|Proteobacteria,2TR8K@28211|Alphaproteobacteria,3JSP4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Mycolic acid cyclopropane synthetase	cfa2	-	2.1.1.79	ko:K00574	-	-	-	-	ko00000,ko01000	-	-	-	CMAS
SX1_k127_3104878_1	1297865.APJD01000010_gene5040	5.028e-168	529.0	296J5@1|root,2ZTUQ@2|Bacteria,1MV40@1224|Proteobacteria,2U13Z@28211|Alphaproteobacteria,3JU0X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3104878_3	1297865.APJD01000010_gene5042	7.273e-115	371.0	COG0359@1|root,COG0359@2|Bacteria,1RD0R@1224|Proteobacteria,2TSC9@28211|Alphaproteobacteria,3JSJC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Binds to the 23S rRNA	rplI	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02939	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L9_C,Ribosomal_L9_N
SX1_k127_3104878_2	1297865.APJD01000010_gene5043	1.826e-147	467.0	2DNKH@1|root,32UJ8@2|Bacteria,1R362@1224|Proteobacteria,2TZYG@28211|Alphaproteobacteria,3JSYP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF2232
SX1_k127_3117589_1	1297865.APJD01000007_gene2214	2.589e-115	370.0	COG1082@1|root,COG1082@2|Bacteria,1R4JM@1224|Proteobacteria,2TREG@28211|Alphaproteobacteria,3JU6Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Xylose isomerase domain protein TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
SX1_k127_3117589_0	1297865.APJD01000007_gene2213	0.0	1018.0	28KNR@1|root,2Z9F7@2|Bacteria,1NC4P@1224|Proteobacteria,2TSTI@28211|Alphaproteobacteria,3JTPT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Glycosyl hydrolase family 79, N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_79n
SX1_k127_3117589_2	1297865.APJD01000007_gene2212	1.284e-87	289.0	COG1192@1|root,COG1192@2|Bacteria,1R923@1224|Proteobacteria,2U0YP@28211|Alphaproteobacteria,3JUUH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	ATPase MipZ	-	-	-	-	-	-	-	-	-	-	-	-	MipZ
SX1_k127_3121094_10	1230476.C207_00210	8.585e-77	259.0	COG0473@1|root,COG0473@2|Bacteria,1MUH4@1224|Proteobacteria,2TQKG@28211|Alphaproteobacteria,3JWJW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CE	Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate	leuB	GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.1.1.85	ko:K00052	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	M00432,M00535	R00994,R04426,R10052	RC00084,RC00417,RC03036	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Iso_dh
SX1_k127_3121094_7	1297865.APJD01000007_gene1785	3.644e-137	436.0	COG0066@1|root,COG0066@2|Bacteria,1NZAW@1224|Proteobacteria,2TU8D@28211|Alphaproteobacteria,3JWFU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate	-	-	4.2.1.33,4.2.1.35	ko:K01704	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	M00432,M00535	R03896,R03898,R03968,R04001,R10170	RC00976,RC00977,RC01041,RC01046,RC03072	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Aconitase_C
SX1_k127_3121094_1	1297865.APJD01000007_gene1784	2.352e-306	940.0	COG0065@1|root,COG0065@2|Bacteria,1MVYR@1224|Proteobacteria,2TVD2@28211|Alphaproteobacteria,3JURG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate	-	-	4.2.1.33,4.2.1.35	ko:K01703	ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230	M00432,M00535	R03896,R03898,R03968,R04001,R08620,R08624,R08628,R08634,R08641,R08645,R10170	RC00497,RC00976,RC00977,RC01041,RC01046,RC03072	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Aconitase
SX1_k127_3121094_5	1230476.C207_00207	2.652e-156	495.0	COG1414@1|root,COG1414@2|Bacteria,1RFSY@1224|Proteobacteria,2U3M4@28211|Alphaproteobacteria,3JZWR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_IclR,IclR
SX1_k127_3121094_3	1297865.APJD01000007_gene1783	1.359e-230	717.0	COG0686@1|root,COG0686@2|Bacteria,1QTX1@1224|Proteobacteria,2TQQC@28211|Alphaproteobacteria,3JV8B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Alanine dehydrogenase/PNT, N-terminal domain	ald	-	1.4.1.1	ko:K00259	ko00250,ko00430,ko01100,map00250,map00430,map01100	-	R00396	RC00008	ko00000,ko00001,ko01000	-	-	-	AlaDh_PNT_C,AlaDh_PNT_N
SX1_k127_3121094_9	1297865.APJD01000007_gene1782	2.331e-93	310.0	COG1522@1|root,COG1522@2|Bacteria,1RI7R@1224|Proteobacteria,2U9CC@28211|Alphaproteobacteria,3JVQX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix ASNC type	aldR	-	-	ko:K03719	-	-	-	-	ko00000,ko03000,ko03036	-	-	-	AsnC_trans_reg,HTH_24,HTH_AsnC-type
SX1_k127_3121094_8	1230476.C207_00204	9.624e-133	424.0	COG3038@1|root,COG3038@2|Bacteria,1MZ7X@1224|Proteobacteria,2UBYU@28211|Alphaproteobacteria,3JTR4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Prokaryotic cytochrome b561	-	-	-	ko:K12262	-	-	-	-	ko00000	-	-	-	Ni_hydr_CYTB,YceI
SX1_k127_3121094_4	1230476.C207_00203	2.826e-197	616.0	2EQX7@1|root,33IGZ@2|Bacteria,1MY64@1224|Proteobacteria,2TTE4@28211|Alphaproteobacteria,3JSMY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_35790	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3121094_6	1297865.APJD01000007_gene1779	9.38e-152	481.0	COG0518@1|root,COG0518@2|Bacteria,1MV9U@1224|Proteobacteria,2TUIN@28211|Alphaproteobacteria,3JR7W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Glutamine amidotransferase class-I	-	-	6.3.5.2	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	M00050	R01230,R01231,R08244	RC00010,RC00204	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	GATase
SX1_k127_3121094_0	1297865.APJD01000007_gene1778	0.0	1149.0	COG4986@1|root,COG4986@2|Bacteria,1MV85@1224|Proteobacteria,2TTRP@28211|Alphaproteobacteria,3JUTR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K02050	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	BPD_transp_1
SX1_k127_3121094_2	1297865.APJD01000007_gene1777	1.369e-269	830.0	COG1116@1|root,COG4754@1|root,COG1116@2|Bacteria,COG4754@2|Bacteria,1MUDV@1224|Proteobacteria,2TRXZ@28211|Alphaproteobacteria,3JR9Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ABC transporter, ATP-binding protein	-	-	-	ko:K02049	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	AAA_assoc_C,ABC_tran
SX1_k127_3127279_8	1297865.APJD01000039_gene1693	2.936e-57	204.0	COG4774@1|root,COG4774@2|Bacteria,1MV0X@1224|Proteobacteria,2TVX5@28211|Alphaproteobacteria,3K6QH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SX1_k127_3127279_0	1297865.APJD01000039_gene1692	0.0	1349.0	2E9GM@1|root,333PR@2|Bacteria,1R3BE@1224|Proteobacteria,2U1T8@28211|Alphaproteobacteria,3JUN1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3127279_3	1297865.APJD01000039_gene1691	5.165e-241	746.0	COG1804@1|root,COG1804@2|Bacteria,1MVY1@1224|Proteobacteria,2TVJ9@28211|Alphaproteobacteria,3JQZ3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA-transferase family III	-	-	-	-	-	-	-	-	-	-	-	-	CoA_transf_3
SX1_k127_3127279_6	1297865.APJD01000039_gene1690	7.53e-150	476.0	COG1024@1|root,COG1024@2|Bacteria,1R3Q4@1224|Proteobacteria,2U3E5@28211|Alphaproteobacteria	28211|Alphaproteobacteria	I	Belongs to the enoyl-CoA hydratase isomerase family	-	-	4.2.1.17	ko:K01692	ko00071,ko00280,ko00281,ko00310,ko00360,ko00362,ko00380,ko00410,ko00627,ko00640,ko00650,ko00903,ko00930,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00310,map00360,map00362,map00380,map00410,map00627,map00640,map00650,map00903,map00930,map01100,map01110,map01120,map01130,map01212	M00032,M00087	R03026,R03045,R04137,R04170,R04204,R04224,R04738,R04740,R04744,R04746,R04749,R05595,R06411,R06412,R06942,R08093	RC00831,RC00834,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
SX1_k127_3127279_7	1297865.APJD01000039_gene1689	1.596e-84	300.0	COG1545@1|root,COG1545@2|Bacteria,1N7HH@1224|Proteobacteria,2UFFB@28211|Alphaproteobacteria,3K47F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Rubredoxin-like zinc ribbon domain (DUF35_N)	-	-	-	-	-	-	-	-	-	-	-	-	DUF35_N,OB_aCoA_assoc
SX1_k127_3127279_2	1297865.APJD01000039_gene1688	5.649e-252	778.0	COG0183@1|root,COG0183@2|Bacteria,1MUZV@1224|Proteobacteria,2TRHF@28211|Alphaproteobacteria,3K3E4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Thiolase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3127279_1	1297865.APJD01000039_gene1687	3.331e-267	826.0	COG0683@1|root,COG0683@2|Bacteria	2|Bacteria	E	ABC-type branched-chain amino acid transport systems, periplasmic component	MA20_10005	-	-	-	-	-	-	-	-	-	-	-	NMT1_3,Peripla_BP_6
SX1_k127_3127279_5	1297865.APJD01000039_gene1686	3.045e-173	543.0	COG2771@1|root,COG2771@2|Bacteria,1QWEA@1224|Proteobacteria,2UYRE@28211|Alphaproteobacteria,3K2F2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Autoinducer binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Autoind_bind,GerE
SX1_k127_3127279_4	1297865.APJD01000039_gene1685	1.628e-237	740.0	COG0433@1|root,COG0433@2|Bacteria,1MVA9@1224|Proteobacteria,2TTKA@28211|Alphaproteobacteria,3JU4E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function DUF87	MA20_00215	-	-	ko:K06915	-	-	-	-	ko00000	-	-	-	DUF87
SX1_k127_3142703_8	1297865.APJD01000014_gene916	1.647e-50	179.0	COG3618@1|root,COG3618@2|Bacteria,1R5V9@1224|Proteobacteria,2TU5F@28211|Alphaproteobacteria,3JQNB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_2
SX1_k127_3142703_4	1297865.APJD01000014_gene915	1.472e-187	587.0	COG0384@1|root,COG0384@2|Bacteria,1MUAS@1224|Proteobacteria,2U3ND@28211|Alphaproteobacteria,3JTH6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Phenazine biosynthesis-like protein	phzF	-	5.3.3.17	ko:K06998	ko00405,ko01130,ko02024,map00405,map01130,map02024	M00835	-	-	ko00000,ko00001,ko00002,ko01000	-	-	-	PhzC-PhzF
SX1_k127_3142703_6	1297865.APJD01000014_gene914	8.337e-96	314.0	COG5483@1|root,COG5483@2|Bacteria,1N3XQ@1224|Proteobacteria,2UCV7@28211|Alphaproteobacteria,3JY6B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function, DUF488	MA20_09495	-	-	-	-	-	-	-	-	-	-	-	DUF488
SX1_k127_3142703_3	1297865.APJD01000014_gene913	6.074e-190	605.0	COG1801@1|root,COG1801@2|Bacteria,1MU7F@1224|Proteobacteria,2TT1D@28211|Alphaproteobacteria,3JRQY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function DUF72	MA20_09500	-	-	-	-	-	-	-	-	-	-	-	DUF72
SX1_k127_3142703_7	1230476.C207_00596	8.685e-66	226.0	2A7GU@1|root,30WEE@2|Bacteria,1RDVB@1224|Proteobacteria,2U7PX@28211|Alphaproteobacteria,3JYUK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_09505	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3142703_9	1230476.C207_00595	4.908e-25	107.0	2AEIW@1|root,314EC@2|Bacteria,1NA1Y@1224|Proteobacteria,2UIHI@28211|Alphaproteobacteria,3K18Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3142703_1	1230476.C207_00594	8.667e-249	771.0	COG0463@1|root,COG2246@1|root,COG0463@2|Bacteria,COG2246@2|Bacteria,1MV8J@1224|Proteobacteria,2TTYF@28211|Alphaproteobacteria,3JQXI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	GtrA-like protein	MA20_09515	-	2.4.1.83	ko:K00721	ko00510,ko01100,map00510,map01100	-	R01009	RC00005	ko00000,ko00001,ko01000,ko01003	-	GT2	-	Glycos_transf_2,GtrA
SX1_k127_3142703_0	1297865.APJD01000014_gene910	0.0	994.0	COG1807@1|root,COG1807@2|Bacteria,1P6JE@1224|Proteobacteria,2TV39@28211|Alphaproteobacteria,3JQTU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Dolichyl-phosphate-mannose-protein mannosyltransferase	MA20_09520	-	-	-	-	-	-	-	-	-	-	-	PMT_2
SX1_k127_3142703_5	1297865.APJD01000014_gene909	2.043e-154	488.0	COG4312@1|root,COG4312@2|Bacteria,1QIBA@1224|Proteobacteria,2TTFP@28211|Alphaproteobacteria,3JWSK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bacterial protein of unknown function (DUF899)	-	-	-	-	-	-	-	-	-	-	-	-	DUF899
SX1_k127_3142703_2	1297865.APJD01000014_gene908	5.678e-202	634.0	28NMJ@1|root,2ZBN2@2|Bacteria,1MV0D@1224|Proteobacteria,2TSST@28211|Alphaproteobacteria,3JVKW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2778)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2778
SX1_k127_3142742_2	716928.AJQT01000068_gene3427	1.108e-11	75.0	COG1309@1|root,COG1309@2|Bacteria,1R5GP@1224|Proteobacteria,2U5WC@28211|Alphaproteobacteria,4B9JC@82115|Rhizobiaceae	28211|Alphaproteobacteria	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_3142742_1	1297865.APJD01000014_gene751	1.595e-157	499.0	COG0477@1|root,COG2814@2|Bacteria,1MVQQ@1224|Proteobacteria,2TR7X@28211|Alphaproteobacteria,3K6QA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	-	-	-	ko:K08369	-	-	-	-	ko00000,ko02000	2.A.1	-	-	MFS_1,MFS_4,Sugar_tr
SX1_k127_3142742_0	1297865.APJD01000014_gene750	2.789e-263	812.0	COG1228@1|root,COG1228@2|Bacteria,1MVAF@1224|Proteobacteria,2TTYC@28211|Alphaproteobacteria,3JSY1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
SX1_k127_315188_10	1297865.APJD01000005_gene3527	2.619e-103	337.0	COG0601@1|root,COG0601@2|Bacteria,1MU8Z@1224|Proteobacteria,2TR3F@28211|Alphaproteobacteria,3JR08@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02033	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
SX1_k127_315188_1	1297865.APJD01000005_gene3528	0.0	1092.0	COG0747@1|root,COG0747@2|Bacteria,1MUZH@1224|Proteobacteria,2TQQH@28211|Alphaproteobacteria,3JVSR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Bacterial extracellular solute-binding proteins, family 5 Middle	-	-	-	ko:K02035	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	SBP_bac_5
SX1_k127_315188_11	398525.KB900701_gene3563	2.668e-48	174.0	COG3266@1|root,COG3266@2|Bacteria,1NC0S@1224|Proteobacteria,2UG0A@28211|Alphaproteobacteria,3JZDG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_315188_8	1297865.APJD01000005_gene3530	9.479e-169	534.0	COG1075@1|root,COG1075@2|Bacteria,1NJNA@1224|Proteobacteria,2TSQC@28211|Alphaproteobacteria,3JSU2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Alpha beta hydrolase	MA20_16715	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6,Lipase_2
SX1_k127_315188_2	1297865.APJD01000005_gene3531	0.0	1014.0	COG1020@1|root,COG1020@2|Bacteria,1N7HY@1224|Proteobacteria,2TRZV@28211|Alphaproteobacteria,3JSC2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Protein of unknown function (DUF1298)	MA20_16710	-	-	-	-	-	-	-	-	-	-	-	DUF1298,WES_acyltransf
SX1_k127_315188_5	1297865.APJD01000005_gene3532	1.279e-230	713.0	COG0596@1|root,COG0596@2|Bacteria,1N5ZI@1224|Proteobacteria,2TS7X@28211|Alphaproteobacteria,3JTQ9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Serine aminopeptidase, S33	-	-	2.7.10.2,3.3.2.9	ko:K01253,ko:K08253	ko00980,ko04976,ko05204,map00980,map04976,map05204	-	R07013,R07014,R07027,R07071,R07072,R07082,R09410,R09417,R09443	RC01447,RC01728,RC01764,RC02528	ko00000,ko00001,ko01000,ko01002	-	-	-	Abhydrolase_1
SX1_k127_315188_0	1297865.APJD01000005_gene3533	0.0	2218.0	COG0369@1|root,COG2124@1|root,COG0369@2|Bacteria,COG2124@2|Bacteria,1MV75@1224|Proteobacteria,2TSV7@28211|Alphaproteobacteria,3JUN7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	PQ	Flavodoxin	MA20_16700	-	1.14.14.1,1.6.2.4	ko:K14338	ko00071,ko00380,ko00627,ko01120,map00071,map00380,map00627,map01120	-	R03629,R04121,R05259	RC00046,RC01311	ko00000,ko00001,ko00199,ko01000	-	-	-	FAD_binding_1,Flavodoxin_1,NAD_binding_1,p450
SX1_k127_315188_9	1297865.APJD01000005_gene3534	2.519e-140	449.0	COG4262@1|root,COG4262@2|Bacteria,1P1G3@1224|Proteobacteria,2TQSR@28211|Alphaproteobacteria,3JSYK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Spermidine synthase	MA20_16695	-	2.5.1.16	ko:K00797	ko00270,ko00330,ko00410,ko00480,ko01100,map00270,map00330,map00410,map00480,map01100	M00034,M00133	R01920,R02869,R08359	RC00021,RC00053	ko00000,ko00001,ko00002,ko01000	-	-	-	Spermine_synth
SX1_k127_315188_7	1297865.APJD01000005_gene3535	2.346e-190	595.0	COG4977@1|root,COG4977@2|Bacteria,1MXZQ@1224|Proteobacteria,2U38S@28211|Alphaproteobacteria,3JXRK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	ko:K07506	-	-	-	-	ko00000,ko03000	-	-	-	HTH_18
SX1_k127_315188_13	1304878.AUGD01000018_gene1293	0.0001315	44.0	29ZK8@1|root,30MKM@2|Bacteria,1RF9T@1224|Proteobacteria,2U8EN@28211|Alphaproteobacteria,3JYSZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_315188_4	1297865.APJD01000005_gene3536	7.149e-237	737.0	COG1454@1|root,COG1454@2|Bacteria,1MVPH@1224|Proteobacteria,2TSK0@28211|Alphaproteobacteria,3JUM2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Iron-containing alcohol dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Fe-ADH
SX1_k127_315188_6	1297865.APJD01000005_gene3537	4.344e-200	624.0	COG3485@1|root,COG3485@2|Bacteria,1MX7W@1224|Proteobacteria,2TT8T@28211|Alphaproteobacteria,3JW00@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Catechol dioxygenase N terminus	-	-	1.13.11.37	ko:K04098	ko00361,ko00362,ko01100,ko01120,map00361,map00362,map01100,map01120	-	R03891,R04061	RC00388,RC01016	ko00000,ko00001,ko01000	-	-	-	Dioxygenase_C,Dioxygenase_N
SX1_k127_315188_3	1297865.APJD01000005_gene3538	4.291e-319	986.0	COG0654@1|root,COG0654@2|Bacteria,1MUN4@1224|Proteobacteria,2TRHJ@28211|Alphaproteobacteria,3JW9N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	FAD binding domain	tfdB	-	1.14.13.20	ko:K10676	ko00361,ko01100,ko01120,ko01220,map00361,map01100,map01120,map01220	-	R03997,R05441	RC00046	ko00000,ko00001,ko01000	-	-	-	FAD_binding_3
SX1_k127_315188_12	1297865.APJD01000005_gene3538	4.637e-34	130.0	COG0654@1|root,COG0654@2|Bacteria,1MUN4@1224|Proteobacteria,2TRHJ@28211|Alphaproteobacteria,3JW9N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	FAD binding domain	tfdB	-	1.14.13.20	ko:K10676	ko00361,ko01100,ko01120,ko01220,map00361,map01100,map01120,map01220	-	R03997,R05441	RC00046	ko00000,ko00001,ko01000	-	-	-	FAD_binding_3
SX1_k127_3155429_11	1230476.C207_06807	1.756e-05	47.0	COG2826@1|root,COG2826@2|Bacteria,1PP49@1224|Proteobacteria,2TRVA@28211|Alphaproteobacteria,3JZ7D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Integrase core domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_38,rve
SX1_k127_3155429_3	1297865.APJD01000011_gene6519	2.216e-239	739.0	COG3435@1|root,COG3435@2|Bacteria,1MVJP@1224|Proteobacteria,2TUUS@28211|Alphaproteobacteria,3JQZN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Cupin domain	MA20_40225	-	1.13.11.4	ko:K00450	ko00350,ko01100,ko01120,map00350,map01100,map01120	-	R02656	RC00764	ko00000,ko00001,ko01000	-	-	-	Cupin_2
SX1_k127_3155429_5	1297865.APJD01000011_gene6520	9.989e-135	430.0	COG0625@1|root,COG0625@2|Bacteria,1RA4Y@1224|Proteobacteria,2U5B6@28211|Alphaproteobacteria,3JS39@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, N-terminal domain	MA20_40230	-	5.2.1.4	ko:K01801	ko00350,ko01100,ko01120,map00350,map01100,map01120	-	R03868	RC00867	ko00000,ko00001,ko01000	-	-	-	GST_C_2,GST_C_3,GST_N,GST_N_3
SX1_k127_3155429_8	398525.KB900701_gene1092	1.372e-90	301.0	COG1846@1|root,COG1846@2|Bacteria,1RJPG@1224|Proteobacteria,2TUJP@28211|Alphaproteobacteria,3JSFM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	MA20_40235	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SX1_k127_3155429_1	1297865.APJD01000011_gene6522	1.162e-263	818.0	COG0654@1|root,COG0654@2|Bacteria,1MWWT@1224|Proteobacteria,2TRZP@28211|Alphaproteobacteria,3JVCQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	FAD binding domain	-	-	1.14.13.24	ko:K22270	ko00362,ko01120,map00362,map01120	-	R02589	RC00046	ko00000,ko00001,ko01000	-	-	-	FAD_binding_3
SX1_k127_3155429_0	1297865.APJD01000011_gene6523	0.0	1110.0	COG0365@1|root,COG0365@2|Bacteria,1MUF5@1224|Proteobacteria,2TR3P@28211|Alphaproteobacteria,3JQZH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	AMP-binding enzyme C-terminal domain	-	-	6.2.1.1	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	M00357	R00235,R00236,R00316,R00926,R01354	RC00004,RC00012,RC00043,RC00070,RC02746,RC02816	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C,FAD_binding_3
SX1_k127_3155429_2	1297865.APJD01000011_gene6524	5.421e-250	771.0	COG0654@1|root,COG0654@2|Bacteria,1QW6Y@1224|Proteobacteria,2TWQJ@28211|Alphaproteobacteria,3JS5Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	FAD binding domain	MA20_40245	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3,NAD_binding_8
SX1_k127_3155429_10	1297865.APJD01000011_gene6525	9.762e-37	140.0	2CICK@1|root,33G58@2|Bacteria,1NAV8@1224|Proteobacteria,2UG7T@28211|Alphaproteobacteria,3K1A1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3155429_9	1297865.APJD01000011_gene6526	6.16e-40	149.0	2DRQ5@1|root,33CJP@2|Bacteria,1NC87@1224|Proteobacteria,2UIQ3@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Cys_rich_FGFR
SX1_k127_3155429_6	1297865.APJD01000011_gene6527	8.748e-132	425.0	KOG3648@1|root,32VTC@2|Bacteria,1R6UN@1224|Proteobacteria,2U0NH@28211|Alphaproteobacteria,3JU6D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	fibroblast growth factor binding	-	-	-	-	-	-	-	-	-	-	-	-	Cys_rich_FGFR,GHBP
SX1_k127_3155429_4	1230476.C207_05902	7.622e-232	720.0	COG0845@1|root,COG0845@2|Bacteria,1MU78@1224|Proteobacteria,2TU0W@28211|Alphaproteobacteria,3JRDK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K03585	ko01501,ko01503,map01501,map01503	M00646,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	2.A.6.2,8.A.1.6	-	-	Biotin_lipoyl_2,HlyD_D23
SX1_k127_3155429_7	1230476.C207_05903	5.155e-113	367.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JRGX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	AcrB/AcrD/AcrF family	MA20_01135	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
SX1_k127_3175446_0	1297865.APJD01000026_gene2493	0.0	1405.0	COG0642@1|root,COG0745@1|root,COG0784@1|root,COG0840@1|root,COG1511@1|root,COG2203@1|root,COG0745@2|Bacteria,COG0784@2|Bacteria,COG0840@2|Bacteria,COG1511@2|Bacteria,COG2203@2|Bacteria,COG2205@2|Bacteria,1NRP8@1224|Proteobacteria,2TWQB@28211|Alphaproteobacteria,3JQWC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Domain present in phytochromes and cGMP-specific phosphodiesterases.	MA20_07280	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HATPase_c,HisKA,Response_reg
SX1_k127_3175446_1	172088.AUGA01000022_gene559	1.088e-38	147.0	COG2202@1|root,COG3437@1|root,COG3920@1|root,COG2202@2|Bacteria,COG3437@2|Bacteria,COG3920@2|Bacteria,1NWNJ@1224|Proteobacteria,2TWQC@28211|Alphaproteobacteria,3JU7K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	HWE histidine kinase	MA20_07275	-	-	-	-	-	-	-	-	-	-	-	HWE_HK,PAS_3,PAS_4,PAS_9,Response_reg
SX1_k127_3185289_2	1297865.APJD01000026_gene2563	2.078e-181	569.0	COG1028@1|root,COG1028@2|Bacteria,1MXNQ@1224|Proteobacteria,2TUHP@28211|Alphaproteobacteria,3JX3S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_3185289_0	1297865.APJD01000026_gene2564	2.955e-269	829.0	COG0683@1|root,COG0683@2|Bacteria,1QQMX@1224|Proteobacteria,2U56I@28211|Alphaproteobacteria,3JVF0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_3185289_1	1297865.APJD01000026_gene2565	1.975e-195	611.0	COG3181@1|root,COG3181@2|Bacteria,1NATK@1224|Proteobacteria,2U2MD@28211|Alphaproteobacteria,3JXN1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter family receptor	-	-	-	-	-	-	-	-	-	-	-	-	TctC
SX1_k127_3185289_4	1297865.APJD01000026_gene2566	2.007e-104	344.0	2ADMK@1|root,313CA@2|Bacteria,1N69P@1224|Proteobacteria,2UE1J@28211|Alphaproteobacteria,3K0FQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3185289_3	1297865.APJD01000026_gene2567	9.99e-132	420.0	COG2159@1|root,COG2159@2|Bacteria,1R5PG@1224|Proteobacteria,2U2G9@28211|Alphaproteobacteria,3JWBY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Amidohydrolase	-	-	4.1.1.45	ko:K03392	ko00380,ko01100,map00380,map01100	M00038	R04323	RC00779	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_2
SX1_k127_3185787_1	1297865.APJD01000028_gene5182	3.513e-50	180.0	COG2981@1|root,COG2981@2|Bacteria,1MWAA@1224|Proteobacteria,2TT6E@28211|Alphaproteobacteria,3JT5R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Etoposide-induced protein 2.4 (EI24)	MA20_24505	-	-	ko:K06203	-	-	-	-	ko00000	-	-	-	EI24
SX1_k127_3185787_0	1297865.APJD01000028_gene5183	6.849e-287	882.0	COG0477@1|root,COG0477@2|Bacteria,1MXBV@1224|Proteobacteria,2TWZG@28211|Alphaproteobacteria,3JVBD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	-	-	-	ko:K08369	-	-	-	-	ko00000,ko02000	2.A.1	-	-	Sugar_tr
SX1_k127_3188703_0	1297865.APJD01000007_gene2358	0.0	1293.0	COG3210@1|root,COG4625@1|root,COG3210@2|Bacteria,COG4625@2|Bacteria,1MU92@1224|Proteobacteria,2TSB7@28211|Alphaproteobacteria,3JUBZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Autotransporter beta-domain	-	-	-	-	-	-	-	-	-	-	-	-	Autotransporter,PATR
SX1_k127_3188703_1	1230476.C207_02495	3.114e-197	618.0	COG0697@1|root,COG0697@2|Bacteria,1MXVF@1224|Proteobacteria,2TU7N@28211|Alphaproteobacteria,3JUZ9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_3188703_2	1297865.APJD01000007_gene2356	1.237e-179	563.0	COG0656@1|root,COG0656@2|Bacteria,1MUH2@1224|Proteobacteria,2TTC2@28211|Alphaproteobacteria,3JV6E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Aldo/keto reductase family	MA20_17035	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
SX1_k127_3195467_0	1297865.APJD01000020_gene201	0.0	1285.0	COG0587@1|root,COG0587@2|Bacteria,1MUIF@1224|Proteobacteria,2TSCN@28211|Alphaproteobacteria,3JQY6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DNA polymerase	dnaE	GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496	2.7.7.7	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_alpha,HHH_6,PHP,tRNA_anti-codon
SX1_k127_3195467_1	1230476.C207_00884	3.829e-206	659.0	COG0052@1|root,COG0052@2|Bacteria,1MU33@1224|Proteobacteria,2TRXE@28211|Alphaproteobacteria,3JQQ3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the universal ribosomal protein uS2 family	rpsB	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02967	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S2
SX1_k127_3195467_2	1230476.C207_00885	6.149e-181	568.0	COG0264@1|root,COG0264@2|Bacteria,1MUS2@1224|Proteobacteria,2TQM0@28211|Alphaproteobacteria,3JSSW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome	tsf	GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576	-	ko:K02357	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	EF_TS
SX1_k127_3195467_4	1297865.APJD01000020_gene204	6.893e-146	464.0	COG0528@1|root,COG0528@2|Bacteria,1MV3N@1224|Proteobacteria,2TQYN@28211|Alphaproteobacteria,3JQN8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the reversible phosphorylation of UMP to UDP	pyrH	-	2.7.4.22	ko:K09903	ko00240,ko01100,map00240,map01100	-	R00158	RC00002	ko00000,ko00001,ko01000	-	-	-	AA_kinase
SX1_k127_3195467_5	1297865.APJD01000020_gene205	1.584e-109	359.0	COG0233@1|root,COG0233@2|Bacteria,1N66T@1224|Proteobacteria,2U5B2@28211|Alphaproteobacteria,3JT3Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another	frr	GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576	-	ko:K02838	-	-	-	-	ko00000,ko03012	-	-	-	RRF
SX1_k127_3195467_3	1230476.C207_00888	6.055e-153	488.0	COG0020@1|root,COG0020@2|Bacteria,1MVP1@1224|Proteobacteria,2TTVJ@28211|Alphaproteobacteria,3JTBS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids	uppS	GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617	2.5.1.31	ko:K00806	ko00900,ko01110,map00900,map01110	-	R06447	RC00279,RC02839	ko00000,ko00001,ko01000,ko01006	-	-	-	Prenyltransf
SX1_k127_3195467_6	1297865.APJD01000020_gene207	1.994e-50	185.0	COG0575@1|root,COG0575@2|Bacteria,1MWSV@1224|Proteobacteria,2U9ED@28211|Alphaproteobacteria,3JSVI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the CDS family	cdsA	-	2.7.7.41	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	M00093	R01799	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_1
SX1_k127_3195467_7	1128421.JAGA01000002_gene119	4.349e-31	130.0	COG0334@1|root,COG0334@2|Bacteria,2NNRJ@2323|unclassified Bacteria	2|Bacteria	E	Belongs to the Glu Leu Phe Val dehydrogenases family	gdhA	-	1.4.1.3	ko:K00261	ko00220,ko00250,ko00471,ko00910,ko01100,ko01200,ko04217,ko04964,map00220,map00250,map00471,map00910,map01100,map01200,map04217,map04964	M00740	R00243,R00248	RC00006,RC02799	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ELFV_dehydrog,ELFV_dehydrog_N
SX1_k127_320359_1	1297865.APJD01000011_gene6703	1.207e-114	370.0	2DWR6@1|root,341HZ@2|Bacteria,1Q3XD@1224|Proteobacteria,2U2DN@28211|Alphaproteobacteria,3JXIR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_320359_0	1297865.APJD01000011_gene6702	0.0	1196.0	COG2217@1|root,COG2217@2|Bacteria,1MU08@1224|Proteobacteria,2U0ZY@28211|Alphaproteobacteria,3JWRM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	E1-E2 ATPase	-	-	-	-	-	-	-	-	-	-	-	-	E1-E2_ATPase,Hydrolase
SX1_k127_3204227_1	1297865.APJD01000011_gene6654	1.881e-103	336.0	COG0583@1|root,COG0583@2|Bacteria,1MUNN@1224|Proteobacteria,2VEUG@28211|Alphaproteobacteria,3JUT2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Transcriptional regulator, LysR family	MA20_18660	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_3204227_2	1297865.APJD01000011_gene6655	1.645e-94	311.0	COG2050@1|root,COG2050@2|Bacteria,1RHP8@1224|Proteobacteria,2UA1N@28211|Alphaproteobacteria,3JYAS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Thioesterase-like superfamily	-	-	-	-	-	-	-	-	-	-	-	-	4HBT,4HBT_3
SX1_k127_3204227_0	1230476.C207_06620	8.106e-250	773.0	COG0654@1|root,COG0654@2|Bacteria,1MV8T@1224|Proteobacteria,2TRB8@28211|Alphaproteobacteria,3JSNQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	FAD binding domain	pobA	GO:0000166,GO:0003674,GO:0003824,GO:0004497,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016705,GO:0016709,GO:0018659,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071949,GO:0097159,GO:1901265,GO:1901363	1.14.13.2	ko:K00481	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	-	R01298	RC00046	ko00000,ko00001,ko01000	-	-	-	FAD_binding_3
SX1_k127_3212329_6	1297865.APJD01000007_gene1926	9.331e-93	304.0	COG5426@1|root,COG5426@2|Bacteria,1MVWA@1224|Proteobacteria,2TQNQ@28211|Alphaproteobacteria,3JRQR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	membrane	MA20_44660	-	-	-	-	-	-	-	-	-	-	-	GATase1_like
SX1_k127_3212329_7	1297865.APJD01000007_gene1925	3.18e-82	275.0	2BTHG@1|root,32NPW@2|Bacteria,1RDRN@1224|Proteobacteria,2U7G2@28211|Alphaproteobacteria,3JYRI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2946)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2946
SX1_k127_3212329_0	1297865.APJD01000007_gene1924	0.0	1563.0	COG1629@1|root,COG4771@2|Bacteria,1QTS8@1224|Proteobacteria,2TW3Y@28211|Alphaproteobacteria,3K6QS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SX1_k127_3212329_8	1230476.C207_00325	7.107e-68	231.0	2CJ4Q@1|root,32S97@2|Bacteria,1N0B9@1224|Proteobacteria,2U72B@28211|Alphaproteobacteria,3K0TV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	EthD domain	-	-	-	-	-	-	-	-	-	-	-	-	EthD
SX1_k127_3212329_4	1297865.APJD01000007_gene1922	3.077e-103	336.0	COG3153@1|root,COG3153@2|Bacteria,1RD0C@1224|Proteobacteria,2U7AS@28211|Alphaproteobacteria,3JTBQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_9
SX1_k127_3212329_5	1297865.APJD01000007_gene1921	1.33e-101	349.0	COG1051@1|root,COG1051@2|Bacteria,1N0YW@1224|Proteobacteria,2UC2E@28211|Alphaproteobacteria,3JY9M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Nudix hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
SX1_k127_3212329_1	1297865.APJD01000007_gene1920	3.802e-200	623.0	COG1409@1|root,COG1409@2|Bacteria,1MXD6@1224|Proteobacteria,2TSJ4@28211|Alphaproteobacteria,3JSN9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Calcineurin-like phosphoesterase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos
SX1_k127_3212329_2	1297865.APJD01000007_gene1919	1.195e-149	480.0	COG4278@1|root,COG4278@2|Bacteria,1RBTS@1224|Proteobacteria,2U33M@28211|Alphaproteobacteria,3JWV5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	phenylacetate-CoA ligase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3212329_3	1297865.APJD01000007_gene1918	3.565e-115	376.0	28KZ2@1|root,2ZAEF@2|Bacteria,1RAF2@1224|Proteobacteria,2U3QP@28211|Alphaproteobacteria,3JY2Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3212329_9	1230476.C207_00319	1.885e-38	143.0	2EQGW@1|root,33I2W@2|Bacteria,1N00S@1224|Proteobacteria,2UCSK@28211|Alphaproteobacteria,3K03E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	QU41_27540	-	-	-	-	-	-	-	-	-	-	-	DUF4170
SX1_k127_3212329_10	224911.27350710	3.163e-10	63.0	COG2224@1|root,COG2224@2|Bacteria,1MWIF@1224|Proteobacteria,2TU0Q@28211|Alphaproteobacteria,3JTR3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Isocitrate lyase	aceA	-	4.1.3.1	ko:K01637	ko00630,ko01100,ko01110,ko01120,ko01200,map00630,map01100,map01110,map01120,map01200	M00012	R00479	RC00311,RC00313	ko00000,ko00001,ko00002,ko01000	-	-	-	ICL
SX1_k127_3223984_2	1384054.N790_10965	1.429e-40	152.0	COG1132@1|root,COG1132@2|Bacteria,1MUBM@1224|Proteobacteria,1RMUR@1236|Gammaproteobacteria,1X3UY@135614|Xanthomonadales	135614|Xanthomonadales	V	ABC transporter	draA	-	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
SX1_k127_3223984_0	864051.BurJ1DRAFT_0810	2.615e-259	807.0	COG3288@1|root,COG3288@2|Bacteria,1MVXU@1224|Proteobacteria,2VJZN@28216|Betaproteobacteria,1KJ4C@119065|unclassified Burkholderiales	28216|Betaproteobacteria	C	Alanine dehydrogenase/PNT, N-terminal domain	pntA	-	1.6.1.2	ko:K00324	ko00760,ko01100,map00760,map01100	-	R00112	RC00001	ko00000,ko00001,ko01000	-	-	-	AlaDh_PNT_C,AlaDh_PNT_N,PNTB_4TM
SX1_k127_3223984_1	1095769.CAHF01000001_gene3462	5.676e-103	346.0	COG1282@1|root,COG1282@2|Bacteria,1MUP4@1224|Proteobacteria,2VIDR@28216|Betaproteobacteria,47348@75682|Oxalobacteraceae	28216|Betaproteobacteria	C	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane	pntB	-	1.6.1.2	ko:K00325	ko00760,ko01100,map00760,map01100	-	R00112	RC00001	ko00000,ko00001,ko01000	-	-	-	PNTB
SX1_k127_3226414_1	1297865.APJD01000019_gene3093	1.413e-114	370.0	COG1220@1|root,COG1220@2|Bacteria,1MVK9@1224|Proteobacteria,2TRXC@28211|Alphaproteobacteria,3JT4A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis	hslU	-	-	ko:K03667	-	-	-	-	ko00000,ko03110	-	-	-	AAA_2,ClpB_D2-small
SX1_k127_3226414_0	1297865.APJD01000019_gene3092	1.542e-123	400.0	29CWT@1|root,2ZZUX@2|Bacteria,1REF2@1224|Proteobacteria,2U7K7@28211|Alphaproteobacteria,3JSSE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2585)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2585
SX1_k127_3226414_2	1297865.APJD01000019_gene3091	1.196e-104	342.0	COG1670@1|root,COG1670@2|Bacteria,1R4VC@1224|Proteobacteria,2UEQW@28211|Alphaproteobacteria,3JVY7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Siderophore biosynthesis protein domain	-	-	2.3.1.82	ko:K00663	-	-	-	-	ko00000,ko01000,ko01504	-	-	-	Acetyltransf_8
SX1_k127_3226414_3	1297865.APJD01000019_gene3090	1.075e-71	242.0	COG5405@1|root,COG5405@2|Bacteria,1MVF2@1224|Proteobacteria,2TRRE@28211|Alphaproteobacteria,3JRD8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery	hslV	-	3.4.25.2	ko:K01419	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Proteasome
SX1_k127_3242879_1	1297865.APJD01000009_gene2739	1.678e-159	502.0	COG4993@1|root,COG4993@2|Bacteria,1MUQX@1224|Proteobacteria,2TS2Q@28211|Alphaproteobacteria,3JSFY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	PQQ-like domain	MA20_34345	-	1.1.2.8	ko:K00114	ko00010,ko00625,ko01100,ko01110,ko01120,ko01130,map00010,map00625,map01100,map01110,map01120,map01130	-	R05062,R05198,R05285	RC00087,RC00088,RC01039	ko00000,ko00001,ko01000	-	-	-	PQQ,PQQ_2
SX1_k127_3242879_2	1297865.APJD01000009_gene2740	1.165e-136	437.0	COG0723@1|root,COG0723@2|Bacteria,1R42I@1224|Proteobacteria,2U0F3@28211|Alphaproteobacteria,3JTUR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Rieske [2Fe-2S] domain	MA20_34340	-	-	-	-	-	-	-	-	-	-	-	Rieske
SX1_k127_3242879_3	1297865.APJD01000009_gene2741	7.196e-59	205.0	2ECXJ@1|root,336US@2|Bacteria,1RE34@1224|Proteobacteria,2U7UX@28211|Alphaproteobacteria,3JYR1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_04830	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3242879_0	1297865.APJD01000009_gene2742	3.945e-213	665.0	COG0564@1|root,COG0564@2|Bacteria,1MUBN@1224|Proteobacteria,2TSBK@28211|Alphaproteobacteria,3JRC8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Responsible for synthesis of pseudouridine from uracil	rluD	GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360	5.4.99.23	ko:K06180	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2,S4
SX1_k127_3243068_0	1297865.APJD01000005_gene3808	3.124e-288	889.0	28K9G@1|root,2Z9X1@2|Bacteria,1NEMY@1224|Proteobacteria,2U0J7@28211|Alphaproteobacteria,3JSTQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_15515	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3243068_3	1304878.AUGD01000018_gene1293	0.0001812	44.0	29ZK8@1|root,30MKM@2|Bacteria,1RF9T@1224|Proteobacteria,2U8EN@28211|Alphaproteobacteria,3JYSZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3243068_1	1297865.APJD01000005_gene3807	1.123e-153	486.0	COG0642@1|root,COG0642@2|Bacteria,1MX6R@1224|Proteobacteria,2TS9N@28211|Alphaproteobacteria,3JRDW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Histidine kinase	feuQ	-	-	-	-	-	-	-	-	-	-	-	2CSK_N,HATPase_c
SX1_k127_3246642_0	1297865.APJD01000010_gene4945	9.087e-286	879.0	COG0550@1|root,COG1754@1|root,COG0550@2|Bacteria,COG1754@2|Bacteria,1MUFZ@1224|Proteobacteria,2TRGN@28211|Alphaproteobacteria,3JSU4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone	topA	-	5.99.1.2	ko:K03168	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	Topoisom_bac,Toprim,Toprim_C_rpt,zf-C4_Topoisom
SX1_k127_3248580_5	1297865.APJD01000014_gene528	9.763e-252	778.0	COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,2TQQ7@28211|Alphaproteobacteria,3JR13@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the thiolase family	atoB	-	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
SX1_k127_3248580_2	1297865.APJD01000014_gene529	5.257e-275	848.0	COG2271@1|root,COG2271@2|Bacteria,1QTW2@1224|Proteobacteria,2TVZE@28211|Alphaproteobacteria,3JVFE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	MA20_27390	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_3248580_6	1297865.APJD01000014_gene530	2.682e-173	544.0	COG4689@1|root,COG4689@2|Bacteria,1N4IP@1224|Proteobacteria,2TTZX@28211|Alphaproteobacteria,3JRAW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Catalyzes the conversion of acetoacetate to acetone and carbon dioxide	adc	-	4.1.1.4	ko:K01574	ko00072,ko00640,ko01100,map00072,map00640,map01100	M00088	R01366	RC00040	ko00000,ko00001,ko00002,ko01000	-	-	-	ADC
SX1_k127_3248580_4	1230476.C207_06497	2.566e-256	790.0	COG1752@1|root,COG1752@2|Bacteria,1MVHW@1224|Proteobacteria,2TS4V@28211|Alphaproteobacteria,3JW2T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Patatin phospholipase	-	-	-	ko:K07001	-	-	-	-	ko00000	-	-	-	DUF3734,Patatin
SX1_k127_3248580_1	1297865.APJD01000014_gene532	0.0	1051.0	COG4799@1|root,COG4799@2|Bacteria,1MVAX@1224|Proteobacteria,2TTB9@28211|Alphaproteobacteria,3JU33@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Carboxyl transferase domain	MA20_27300	-	2.1.3.15,6.4.1.3	ko:K01966	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	M00373,M00741	R01859	RC00097,RC00609	ko00000,ko00001,ko00002,ko01000	-	-	-	Carboxyl_trans
SX1_k127_3248580_7	316058.RPB_2112	3.63e-125	409.0	COG1414@1|root,COG1414@2|Bacteria,1NUU3@1224|Proteobacteria,2U11F@28211|Alphaproteobacteria,3JU6R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix isocitrate lyase regulation	MA20_27295	-	-	-	-	-	-	-	-	-	-	-	HTH_IclR,IclR
SX1_k127_3248580_8	1297865.APJD01000014_gene534	6.74e-36	137.0	COG1038@1|root,COG1038@2|Bacteria,1NB5C@1224|Proteobacteria,2UF40@28211|Alphaproteobacteria,3K02Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Biotin-requiring enzyme	-	-	-	-	-	-	-	-	-	-	-	-	Biotin_lipoyl
SX1_k127_3248580_3	1297865.APJD01000014_gene535	2.811e-257	795.0	COG2358@1|root,COG2358@2|Bacteria,1R3ZR@1224|Proteobacteria,2TSND@28211|Alphaproteobacteria,3JV59@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	NMT1-like family	MA20_27285	-	-	-	-	-	-	-	-	-	-	-	NMT1_3
SX1_k127_3248580_0	1297865.APJD01000014_gene536	0.0	1326.0	COG4666@1|root,COG4666@2|Bacteria,1MUNB@1224|Proteobacteria,2TQY9@28211|Alphaproteobacteria,3JT1C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite ATP-independent periplasmic transporter, DctM component	MA20_27280	-	-	-	-	-	-	-	-	-	-	-	DctM
SX1_k127_3251723_2	1297865.APJD01000007_gene2344	3.037e-84	281.0	COG1017@1|root,COG1017@2|Bacteria,1QVJP@1224|Proteobacteria,2U5M6@28211|Alphaproteobacteria,3JY65@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Belongs to the globin family	MA20_17055	-	1.14.12.17	ko:K05916	ko05132,map05132	-	-	-	ko00000,ko00001,ko01000	-	-	-	Globin
SX1_k127_3251723_1	1297865.APJD01000007_gene2343	8.99e-162	527.0	COG1116@1|root,COG1116@2|Bacteria,1MUDV@1224|Proteobacteria,2TUIC@28211|Alphaproteobacteria,3JTSM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ATPases associated with a variety of cellular activities	nrtC	-	-	ko:K02049,ko:K15578	ko00910,ko02010,map00910,map02010	M00188,M00438	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.16,3.A.1.16.1,3.A.1.17	-	-	ABC_tran
SX1_k127_3251723_0	1297865.APJD01000007_gene2342	3.439e-186	584.0	COG0600@1|root,COG0600@2|Bacteria,1MU6Q@1224|Proteobacteria,2TQT6@28211|Alphaproteobacteria,3JUAR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Binding-protein-dependent transport system inner membrane component	nrtB	-	-	ko:K02050,ko:K15577	ko00910,ko02010,map00910,map02010	M00188,M00438	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.16,3.A.1.16.1,3.A.1.16.2,3.A.1.17	-	-	BPD_transp_1
SX1_k127_3251723_3	1297865.APJD01000007_gene2341	5.29e-22	94.0	COG0715@1|root,COG0715@2|Bacteria,1MWDN@1224|Proteobacteria,2TS0X@28211|Alphaproteobacteria,3JSSI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NMT1-like family	nrtA	-	-	ko:K15576	ko00910,ko02010,map00910,map02010	M00438	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.16.1,3.A.1.16.2	-	-	NMT1_2
SX1_k127_3268197_1	1297865.APJD01000030_gene1678	5.941e-135	430.0	COG2808@1|root,COG2808@2|Bacteria,1N1B9@1224|Proteobacteria,2U5JV@28211|Alphaproteobacteria,3JUDM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Putative FMN-binding domain	-	-	-	ko:K07734	-	-	-	-	ko00000,ko03000	-	-	-	FMN_bind_2
SX1_k127_3268197_2	1297865.APJD01000030_gene1679	6.156e-120	387.0	COG1280@1|root,COG1280@2|Bacteria,1RBIQ@1224|Proteobacteria,2U7PS@28211|Alphaproteobacteria,3K60Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	LysE type translocator	-	-	-	-	-	-	-	-	-	-	-	-	LysE
SX1_k127_3268197_0	1297865.APJD01000030_gene1680	0.0	1162.0	COG1680@1|root,COG1680@2|Bacteria,1MVPR@1224|Proteobacteria,2TRFP@28211|Alphaproteobacteria,3K0MF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase	dap	-	3.4.11.19	ko:K01266	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Beta-lactamase,DAP_B
SX1_k127_3300181_2	1297865.APJD01000005_gene3788	0.0	1081.0	COG0457@1|root,COG0457@2|Bacteria,1QVTD@1224|Proteobacteria,2TWZT@28211|Alphaproteobacteria,3JWRB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Glycosyltransferase WbsX	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tran_WbsX,Methyltransf_23
SX1_k127_3300181_0	1297865.APJD01000005_gene3787	0.0	1329.0	COG0790@1|root,COG0790@2|Bacteria,1MWPA@1224|Proteobacteria,2TR2B@28211|Alphaproteobacteria,3JUW3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sel1-like repeats.	-	-	-	ko:K07126	-	-	-	-	ko00000	-	-	-	Sel1
SX1_k127_3300181_3	398525.KB900701_gene3815	4.848e-239	747.0	COG0845@1|root,COG0845@2|Bacteria,1MUI8@1224|Proteobacteria,2TTX9@28211|Alphaproteobacteria,3JTVD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	HlyD family secretion protein	-	-	-	ko:K02022,ko:K11003	ko03070,ko05133,map03070,map05133	M00325,M00575	-	-	ko00000,ko00001,ko00002,ko02000,ko02044	8.A.1.3.1,8.A.1.3.2	-	-	Biotin_lipoyl_2,HlyD,HlyD_3
SX1_k127_3300181_1	1297865.APJD01000005_gene3785	0.0	1142.0	COG2274@1|root,COG2274@2|Bacteria,1R2T0@1224|Proteobacteria,2USBQ@28211|Alphaproteobacteria,3JRFR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	ABC transporter	-	-	-	ko:K06147,ko:K11004	ko02010,ko03070,ko05133,map02010,map03070,map05133	M00325,M00575	-	-	ko00000,ko00001,ko00002,ko02000,ko02044	3.A.1.106,3.A.1.109,3.A.1.109.1,3.A.1.109.2,3.A.1.21	-	-	ABC_membrane,ABC_tran,Peptidase_C39
SX1_k127_3307518_4	1297865.APJD01000003_gene6102	4.063e-105	341.0	COG3764@1|root,COG3764@2|Bacteria,1P806@1224|Proteobacteria,2U0A5@28211|Alphaproteobacteria,3JWBT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Sortase family	-	-	3.4.22.70	ko:K07284	-	-	-	-	ko00000,ko01000,ko01002,ko01011	-	-	-	Sortase
SX1_k127_3307518_1	1297865.APJD01000003_gene6101	0.0	1396.0	COG0045@1|root,COG1042@1|root,COG0045@2|Bacteria,COG1042@2|Bacteria,1MW98@1224|Proteobacteria,2TR24@28211|Alphaproteobacteria,3JS3N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA binding domain	MA20_23020	-	-	ko:K09181	-	-	-	-	ko00000	-	-	-	ATP-grasp_5,CoA_binding_2,Succ_CoA_lig
SX1_k127_3307518_2	1297865.APJD01000003_gene6100	4.343e-149	474.0	COG5640@1|root,COG5640@2|Bacteria,1NPS4@1224|Proteobacteria,2U4PS@28211|Alphaproteobacteria,3JTQ3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Trypsin-like serine protease	MA20_23090	-	-	-	-	-	-	-	-	-	-	-	Trypsin
SX1_k127_3307518_3	1297865.APJD01000003_gene6099	3.146e-135	434.0	COG2197@1|root,COG2197@2|Bacteria,1NB2U@1224|Proteobacteria,2UH2Z@28211|Alphaproteobacteria,3JX57@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
SX1_k127_3307518_0	1297865.APJD01000003_gene6098	0.0	1580.0	COG1404@1|root,COG1404@2|Bacteria,1MU3S@1224|Proteobacteria,2TT0E@28211|Alphaproteobacteria,3JTSC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Subtilase family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
SX1_k127_3307518_5	1230476.C207_03965	7.68e-35	134.0	2A88C@1|root,30X9G@2|Bacteria,1N2P3@1224|Proteobacteria,2UE71@28211|Alphaproteobacteria,3K0MD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3307518_6	398525.KB900701_gene1951	1.539e-22	98.0	2AHNT@1|root,3180U@2|Bacteria,1NMIP@1224|Proteobacteria,2UMR5@28211|Alphaproteobacteria,3K27S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3316245_4	1297865.APJD01000005_gene3600	8.286e-167	525.0	COG1028@1|root,COG1028@2|Bacteria,1MWGK@1224|Proteobacteria,2TVQ8@28211|Alphaproteobacteria,3JQVW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	NAD dependent epimerase/dehydratase family	MA20_16385	-	1.1.1.69	ko:K00046	-	-	-	-	ko00000,ko01000	-	-	-	adh_short_C2
SX1_k127_3316245_3	1297865.APJD01000005_gene3601	2.335e-171	540.0	COG1024@1|root,COG1024@2|Bacteria,1MVQN@1224|Proteobacteria,2TUXD@28211|Alphaproteobacteria,3JSP8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	enoyl-CoA hydratase	MA20_16380	-	5.3.3.18	ko:K15866	ko00360,ko01120,map00360,map01120	-	R09837,R09839	RC00004,RC00326,RC02689,RC03003	ko00000,ko00001,ko01000	-	-	-	ECH_1
SX1_k127_3316245_2	1297865.APJD01000005_gene3602	1.43e-221	690.0	COG3173@1|root,COG3173@2|Bacteria,1MY0Y@1224|Proteobacteria,2TRMW@28211|Alphaproteobacteria,3JSBA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Phosphotransferase enzyme family	MA20_16375	-	-	-	-	-	-	-	-	-	-	-	APH
SX1_k127_3316245_6	1297865.APJD01000005_gene3603	4.89e-75	253.0	COG3173@1|root,COG3173@2|Bacteria,1QW8D@1224|Proteobacteria,2TWSN@28211|Alphaproteobacteria,3K6NI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Aminoglycoside phosphotransferase	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3316245_5	1297865.APJD01000005_gene3604	2.449e-165	521.0	COG1024@1|root,COG1024@2|Bacteria,1MWZC@1224|Proteobacteria,2TRIH@28211|Alphaproteobacteria,3JRFJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the enoyl-CoA hydratase isomerase family	MA20_16365	-	4.2.1.149	ko:K08299	-	-	R10675	RC01095	ko00000,ko01000	-	-	-	ECH_1
SX1_k127_3316245_1	1297865.APJD01000005_gene3605	1.442e-291	895.0	COG1960@1|root,COG1960@2|Bacteria,1MWUU@1224|Proteobacteria,2TT47@28211|Alphaproteobacteria,3JS9P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	acyl-CoA dehydrogenase	MA20_16360	-	1.3.8.1,1.3.8.7	ko:K00248,ko:K00249	ko00071,ko00280,ko00410,ko00640,ko00650,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map00650,map01100,map01110,map01120,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01178,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00120,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_3316245_0	1297865.APJD01000005_gene3606	0.0	1064.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JS0G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	MA20_16355	-	6.2.1.3	ko:K00666,ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
SX1_k127_3319693_8	1297865.APJD01000019_gene3144	3.519e-76	255.0	COG2802@1|root,COG2802@2|Bacteria,1NV9N@1224|Proteobacteria,2TQZ4@28211|Alphaproteobacteria,3JRXV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	ATP-dependent protease La (LON) substrate-binding domain	lonD	-	3.4.21.53	ko:K01338,ko:K07157	ko04112,map04112	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	LON_substr_bdg
SX1_k127_3319693_6	1297865.APJD01000019_gene3143	4.983e-112	363.0	COG3658@1|root,COG3658@2|Bacteria,1RIG7@1224|Proteobacteria,2U3PI@28211|Alphaproteobacteria,3JU24@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Prokaryotic cytochrome b561	-	-	-	-	-	-	-	-	-	-	-	-	Ni_hydr_CYTB
SX1_k127_3319693_10	1230476.C207_02191	8.447e-46	169.0	COG5591@1|root,COG5591@2|Bacteria,1N507@1224|Proteobacteria,2UBZG@28211|Alphaproteobacteria,3K0HR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Peptidase propeptide and YPEB domain	MA20_24995	-	-	-	-	-	-	-	-	-	-	-	PepSY_2
SX1_k127_3319693_0	1297865.APJD01000019_gene3141	0.0	1618.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,3JT1X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Bacterial signalling protein N terminal repeat	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,MHYT,PAS_7,PAS_8,dCache_1
SX1_k127_3319693_7	1297865.APJD01000019_gene3140	1.327e-89	295.0	COG2050@1|root,COG2050@2|Bacteria,1RC67@1224|Proteobacteria,2U6YR@28211|Alphaproteobacteria,3JYBI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Thioesterase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	4HBT
SX1_k127_3319693_9	1297865.APJD01000019_gene3139	2.154e-64	224.0	2A7R7@1|root,30WQ1@2|Bacteria,1REIW@1224|Proteobacteria,2UA6J@28211|Alphaproteobacteria,3JYQG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3319693_5	1297865.APJD01000019_gene3138	3.815e-114	369.0	COG1309@1|root,COG1309@2|Bacteria,1R59A@1224|Proteobacteria,2U08S@28211|Alphaproteobacteria,3JYCX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_3319693_11	398525.KB900701_gene1611	4.732e-35	134.0	COG2835@1|root,COG2835@2|Bacteria,1N6Y2@1224|Proteobacteria,2UF4N@28211|Alphaproteobacteria,3K13U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the UPF0434 family	MA20_24965	-	-	ko:K09791	-	-	-	-	ko00000	-	-	-	Trm112p
SX1_k127_3319693_3	1297865.APJD01000019_gene3136	2.49e-194	606.0	COG1073@1|root,COG1073@2|Bacteria,1R67P@1224|Proteobacteria,2U3D5@28211|Alphaproteobacteria,3JVTA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Serine aminopeptidase, S33	-	-	-	ko:K06889	-	-	-	-	ko00000	-	-	-	Hydrolase_4
SX1_k127_3319693_1	1297865.APJD01000019_gene3135	1.878e-260	803.0	COG0654@1|root,COG0654@2|Bacteria,1MU6I@1224|Proteobacteria,2TRZU@28211|Alphaproteobacteria,3JU6C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family	ubiH	GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016491,GO:0019168,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:1901576,GO:1901661,GO:1901663	-	ko:K03185	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00117	R04989,R08773	RC02670	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_3
SX1_k127_3319693_12	224911.27354970	2.408e-06	53.0	COG2897@1|root,COG2897@2|Bacteria,1MW4B@1224|Proteobacteria,2TR9R@28211|Alphaproteobacteria,3JT1H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rhodanese Homology Domain	sseA	-	2.8.1.1,2.8.1.2	ko:K01011	ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122	-	R01931,R03105,R03106	RC00214	ko00000,ko00001,ko01000	-	-	-	Rhodanese
SX1_k127_3319693_4	1297865.APJD01000019_gene3134	2.764e-190	595.0	COG1946@1|root,COG1946@2|Bacteria,1MV9R@1224|Proteobacteria,2TRFD@28211|Alphaproteobacteria,3JSMX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA thioesterase	tesB	GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006629,GO:0006631,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016042,GO:0016054,GO:0016289,GO:0016787,GO:0016788,GO:0016790,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0042802,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0046483,GO:0047617,GO:0051186,GO:0055086,GO:0071704,GO:0072329,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901575	-	ko:K10805	ko01040,map01040	-	-	-	ko00000,ko00001,ko01000,ko01004	-	-	-	4HBT_3
SX1_k127_3319693_2	1297865.APJD01000019_gene3133	6.978e-198	619.0	2EGCD@1|root,33A46@2|Bacteria,1NW0E@1224|Proteobacteria,2TVBM@28211|Alphaproteobacteria,3JS23@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF4339)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4339
SX1_k127_3326509_0	1297865.APJD01000005_gene3497	2.65e-201	629.0	COG0524@1|root,COG0524@2|Bacteria,1PB7X@1224|Proteobacteria,2U0Y2@28211|Alphaproteobacteria,3JT7W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	belongs to the carbohydrate kinase PfkB family	MA20_16920	-	-	-	-	-	-	-	-	-	-	-	PfkB
SX1_k127_3326509_2	1297865.APJD01000005_gene3496	7.899e-190	594.0	COG0524@1|root,COG0524@2|Bacteria,1MV5B@1224|Proteobacteria,2TSUM@28211|Alphaproteobacteria,3JSQX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway	rbsK	-	2.7.1.15	ko:K00852	ko00030,map00030	-	R01051,R02750	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	PfkB
SX1_k127_3326509_1	1297865.APJD01000005_gene3495	1.575e-193	604.0	COG0446@1|root,COG0446@2|Bacteria,1NR3M@1224|Proteobacteria,2TS0K@28211|Alphaproteobacteria,3JURU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Reductase C-terminal	MA20_16930	-	1.18.1.3	ko:K00529	ko00071,ko00360,ko01120,ko01220,map00071,map00360,map01120,map01220	M00545	R02000,R06782,R06783	RC00098	br01602,ko00000,ko00001,ko00002,ko01000	-	-	-	Pyr_redox_2,Reductase_C
SX1_k127_3328477_9	1297865.APJD01000003_gene6499	1.747e-14	72.0	COG1309@1|root,COG1309@2|Bacteria,1NNEM@1224|Proteobacteria,2UPQ5@28211|Alphaproteobacteria,3K2ZG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_3328477_0	1297865.APJD01000003_gene6497	0.0	1390.0	COG4773@1|root,COG4773@2|Bacteria,1QTT0@1224|Proteobacteria,2TQSQ@28211|Alphaproteobacteria,3JQP4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TonB dependent receptor	fct	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,STN,TonB_dep_Rec
SX1_k127_3328477_7	1297865.APJD01000003_gene6496	1.121e-71	263.0	COG2010@1|root,COG2010@2|Bacteria,1NK3D@1224|Proteobacteria,2UN55@28211|Alphaproteobacteria,3K3Y7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome C oxidase, cbb3-type, subunit III	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3
SX1_k127_3328477_1	1297865.APJD01000003_gene6495	0.0	1317.0	COG0028@1|root,COG0028@2|Bacteria,1MX3Q@1224|Proteobacteria,2U2RW@28211|Alphaproteobacteria,3JX83@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain	-	-	2.2.1.6,4.1.1.7	ko:K01576,ko:K01652	ko00290,ko00627,ko00650,ko00660,ko00770,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00290,map00627,map00650,map00660,map00770,map01100,map01110,map01120,map01130,map01210,map01230	M00019,M00570	R00006,R00014,R00226,R01764,R02672,R03050,R04672,R04673,R08648	RC00027,RC00106,RC00595,RC01192,RC02744,RC02893	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
SX1_k127_3328477_6	1230476.C207_02618	8.348e-75	254.0	2CGX6@1|root,34631@2|Bacteria,1RJQA@1224|Proteobacteria,2UAJT@28211|Alphaproteobacteria,3JZJT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3328477_5	1297865.APJD01000003_gene6493	1.84e-77	263.0	COG1942@1|root,COG1942@2|Bacteria,1Q0W6@1224|Proteobacteria,2UAEY@28211|Alphaproteobacteria,3JZQK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tautomerase enzyme	-	-	-	-	-	-	-	-	-	-	-	-	Tautomerase_2
SX1_k127_3328477_3	1297865.APJD01000003_gene6492	4.465e-130	416.0	2BITE@1|root,32D15@2|Bacteria,1PUZ5@1224|Proteobacteria,2UNBH@28211|Alphaproteobacteria,3K28M@41294|Bradyrhizobiaceae	1297865.APJD01000003_gene6492|-	S	PEP-CTERM motif	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3328477_4	1297865.APJD01000003_gene6491	1.604e-105	346.0	COG1309@1|root,COG1309@2|Bacteria,1NM93@1224|Proteobacteria,2U19J@28211|Alphaproteobacteria,3JTMS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_3328477_2	1297865.APJD01000003_gene6490	8.746e-132	422.0	COG4122@1|root,COG4122@2|Bacteria,1N57D@1224|Proteobacteria,2TT8Y@28211|Alphaproteobacteria,3JTNU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	O-methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_24,Methyltransf_3
SX1_k127_3348619_3	1297865.APJD01000005_gene3579	6.642e-168	529.0	COG4336@1|root,COG4336@2|Bacteria,1MW52@1224|Proteobacteria,2TST8@28211|Alphaproteobacteria,3JS4D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the D-glutamate cyclase family	MA20_16485	-	-	-	-	-	-	-	-	-	-	-	DUF1445
SX1_k127_3348619_2	1297865.APJD01000005_gene3578	4.129e-192	601.0	COG0583@1|root,COG0583@2|Bacteria,1QU1H@1224|Proteobacteria,2U0TE@28211|Alphaproteobacteria,3JSUK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR substrate binding domain	MA20_16490	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_3348619_0	1297865.APJD01000005_gene3577	8.316e-274	843.0	COG0624@1|root,COG0624@2|Bacteria,1MVUX@1224|Proteobacteria,2TR5X@28211|Alphaproteobacteria,3JRW2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Peptidase family M20/M25/M40	MA20_16495	-	3.5.1.6,3.5.1.87	ko:K06016	ko00240,ko01100,map00240,map01100	M00046	R00905,R04666	RC00096	ko00000,ko00001,ko00002,ko01000	-	-	-	M20_dimer,Peptidase_M20,Peptidase_M28
SX1_k127_3348619_1	1297865.APJD01000005_gene3576	8.693e-198	617.0	COG0111@1|root,COG0111@2|Bacteria,1NU4B@1224|Proteobacteria,2TSC4@28211|Alphaproteobacteria,3JUK8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain	MA20_16500	-	1.1.1.399,1.1.1.95	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R01513	RC00031	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh,2-Hacid_dh_C
SX1_k127_3348619_4	1245469.S58_71530	4.538e-20	95.0	2AAGC@1|root,30ZTB@2|Bacteria,1P66Q@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3352899_0	1297865.APJD01000011_gene6747	1.627e-265	818.0	COG1960@1|root,COG1960@2|Bacteria,1MU20@1224|Proteobacteria,2TQJS@28211|Alphaproteobacteria,3JUYV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase N terminal	MA20_19860	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_C,Acyl-CoA_dh_M,Acyl-CoA_dh_N,AcylCoA_DH_N
SX1_k127_3352899_1	1096546.WYO_1996	1.109e-60	212.0	COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,2TS1R@28211|Alphaproteobacteria,1JSS1@119045|Methylobacteriaceae	28211|Alphaproteobacteria	I	Belongs to the thiolase family	fadA	GO:0003674,GO:0003824,GO:0003988,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0006725,GO:0006805,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016020,GO:0016042,GO:0016054,GO:0016408,GO:0016740,GO:0016746,GO:0016747,GO:0019395,GO:0019439,GO:0019748,GO:0019752,GO:0030258,GO:0030312,GO:0032787,GO:0033554,GO:0033812,GO:0034440,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044464,GO:0046395,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0071944,GO:0072329,GO:0098754,GO:1901360,GO:1901361,GO:1901575	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
SX1_k127_3353625_0	1297865.APJD01000007_gene2320	0.0	1219.0	COG3408@1|root,COG3408@2|Bacteria,1MUYU@1224|Proteobacteria,2TQK2@28211|Alphaproteobacteria,3JSVR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	N-terminal domain of (some) glycogen debranching enzymes	MA20_17380	-	-	-	-	-	-	-	-	-	-	-	Bac_rhamnosid6H,GDE_C,GDE_N_bis
SX1_k127_3353625_1	1297865.APJD01000007_gene2319	2.984e-67	229.0	COG1132@1|root,COG1132@2|Bacteria,1MUBM@1224|Proteobacteria,2TQMR@28211|Alphaproteobacteria,3JQZ2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	ABC transporter transmembrane region	MA20_17385	-	-	ko:K06147,ko:K18893	ko02010,map02010	-	-	-	ko00000,ko00001,ko02000	3.A.1,3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
SX1_k127_3354248_0	1297865.APJD01000003_gene6178	1.713e-226	704.0	COG4763@1|root,COG4763@2|Bacteria,1Q61M@1224|Proteobacteria,2TR19@28211|Alphaproteobacteria,3JS8D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Acyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
SX1_k127_3354248_1	1297865.APJD01000003_gene6179	1.683e-110	357.0	COG1643@1|root,COG1643@2|Bacteria,1MUEQ@1224|Proteobacteria,2TRMJ@28211|Alphaproteobacteria,3JT3T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	ATP-dependent helicase	hrpB	-	3.6.4.13	ko:K03579	-	-	-	-	ko00000,ko01000	-	-	-	DEAD,HA2,Helicase_C,HrpB_C
SX1_k127_3388799_8	1297865.APJD01000005_gene3584	1.941e-143	456.0	COG0410@1|root,COG0410@2|Bacteria,1MUGR@1224|Proteobacteria,2VEZK@28211|Alphaproteobacteria,3JRXP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid ATP-binding cassette transporter	MA20_16460	-	-	ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_3388799_10	1304877.KI519399_gene4073	4.402e-20	90.0	COG0235@1|root,COG0235@2|Bacteria,1MW7B@1224|Proteobacteria,2TSX7@28211|Alphaproteobacteria,3JUIT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Class II Aldolase and Adducin N-terminal domain	MA20_16455	-	4.1.1.104	ko:K22130	-	-	-	-	ko00000,ko01000	-	-	-	Aldolase_II
SX1_k127_3388799_9	1297865.APJD01000005_gene3585	3.708e-141	449.0	COG0235@1|root,COG0235@2|Bacteria,1MW7B@1224|Proteobacteria,2TSX7@28211|Alphaproteobacteria,3JUIT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Class II Aldolase and Adducin N-terminal domain	MA20_16455	-	4.1.1.104	ko:K22130	-	-	-	-	ko00000,ko01000	-	-	-	Aldolase_II
SX1_k127_3388799_6	1297865.APJD01000005_gene3586	1.456e-180	567.0	COG2084@1|root,COG2084@2|Bacteria,1MUD0@1224|Proteobacteria,2TT7P@28211|Alphaproteobacteria,3JT85@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase	MA20_16450	-	1.1.1.411	ko:K08319	-	-	-	-	ko00000,ko01000	-	-	-	NAD_binding_11,NAD_binding_2
SX1_k127_3388799_7	1297865.APJD01000005_gene3587	1.028e-174	547.0	COG3622@1|root,COG3622@2|Bacteria,1MV53@1224|Proteobacteria,2TSVI@28211|Alphaproteobacteria,3JQMJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Belongs to the hyi family	MA20_16445	-	5.3.1.35	ko:K22131	-	-	-	-	ko00000,ko01000	-	-	-	AP_endonuc_2
SX1_k127_3388799_4	1297865.APJD01000005_gene3588	7.355e-268	826.0	COG3395@1|root,COG3395@2|Bacteria,1MW4G@1224|Proteobacteria,2TS85@28211|Alphaproteobacteria,3JT3V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative sugar-binding N-terminal domain	-	-	2.7.1.217	ko:K21948	-	-	R11706,R11707	-	ko00000,ko01000	-	-	-	DUF1357_C,DUF1537
SX1_k127_3388799_2	1297865.APJD01000005_gene3589	0.0	1001.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,2TQR7@28211|Alphaproteobacteria,3JVHV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NT	Tar ligand binding domain homologue	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	4HB_MCP_1,MCPsignal
SX1_k127_3388799_3	1297865.APJD01000005_gene3590	5.348e-318	979.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,2TQR7@28211|Alphaproteobacteria,3JSI9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NT	chemotaxis	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	4HB_MCP_1,MCPsignal
SX1_k127_3388799_0	1297865.APJD01000005_gene3591	0.0	2053.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JTRG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
SX1_k127_3388799_5	1297865.APJD01000005_gene3592	7.795e-238	739.0	COG0845@1|root,COG0845@2|Bacteria,1NQZ0@1224|Proteobacteria,2U105@28211|Alphaproteobacteria,3JUK0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Biotin-lipoyl like	-	-	-	-	-	-	-	-	-	-	-	-	HlyD_D23
SX1_k127_3388799_1	1297865.APJD01000005_gene3593	0.0	1024.0	COG0183@1|root,COG0183@2|Bacteria,1QUU1@1224|Proteobacteria,2U0EW@28211|Alphaproteobacteria,3JR6T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the thiolase family	MA20_16420	-	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	-
SX1_k127_3389388_10	1297865.APJD01000007_gene1832	1.623e-35	139.0	COG4655@1|root,COG4655@2|Bacteria,1R41B@1224|Proteobacteria,2TVD0@28211|Alphaproteobacteria,3JSXT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative Tad-like Flp pilus-assembly	-	-	-	-	-	-	-	-	-	-	-	-	Tad,Tad_C
SX1_k127_3389388_9	1230476.C207_00256	2.443e-48	173.0	2DHTV@1|root,300XD@2|Bacteria,1N5CX@1224|Proteobacteria,2UD4A@28211|Alphaproteobacteria,3K0Q8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3389388_1	1297865.APJD01000007_gene1834	0.0	1019.0	COG4655@1|root,COG4655@2|Bacteria,1R41B@1224|Proteobacteria,2TVD0@28211|Alphaproteobacteria,3JSXT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative Tad-like Flp pilus-assembly	-	-	-	-	-	-	-	-	-	-	-	-	Tad,Tad_C
SX1_k127_3389388_7	1230476.C207_00258	2.611e-71	243.0	COG4961@1|root,COG4961@2|Bacteria,1N1I2@1224|Proteobacteria,2UBY5@28211|Alphaproteobacteria,3JZEH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	TadE-like protein	-	-	-	-	-	-	-	-	-	-	-	-	TadE
SX1_k127_3389388_3	1230476.C207_00259	3.737e-186	583.0	COG0583@1|root,COG0583@2|Bacteria,1MXZI@1224|Proteobacteria,2U0TC@28211|Alphaproteobacteria,3JUQV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_3389388_12	196490.AUEZ01000052_gene173	1.456e-23	103.0	COG2900@1|root,COG2900@2|Bacteria,1NGFM@1224|Proteobacteria,2UFA1@28211|Alphaproteobacteria,3K06B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the SlyX family	slyX	-	-	ko:K03745	-	-	-	-	ko00000	-	-	-	SlyX
SX1_k127_3389388_4	1297865.APJD01000007_gene1838	3.479e-163	513.0	COG1054@1|root,COG1054@2|Bacteria,1MUFV@1224|Proteobacteria,2TUB5@28211|Alphaproteobacteria,3JRTF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the UPF0176 family	yceA	-	-	ko:K07146	-	-	-	-	ko00000	-	-	-	Rhodanese
SX1_k127_3389388_0	1297865.APJD01000007_gene1839	0.0	1093.0	COG0405@1|root,COG0405@2|Bacteria,1MUV6@1224|Proteobacteria,2TQWP@28211|Alphaproteobacteria,3JS58@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Gamma-glutamyltranspeptidase	MA20_44955	-	2.3.2.2,3.4.19.13	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	-	R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935	RC00064,RC00090,RC00096	ko00000,ko00001,ko01000,ko01002	-	-	-	G_glu_transpept
SX1_k127_3389388_8	1297865.APJD01000007_gene1840	1.846e-66	243.0	COG0545@1|root,COG0545@2|Bacteria,1RDA1@1224|Proteobacteria,2VF0E@28211|Alphaproteobacteria,3JZ5T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	peptidyl-prolyl cis-trans isomerase	MA20_44950	-	5.2.1.8	ko:K01802,ko:K03772	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	FKBP_C,Rhodanese
SX1_k127_3389388_2	1297865.APJD01000007_gene1841	4.938e-207	655.0	COG0111@1|root,COG0111@2|Bacteria,1MW0R@1224|Proteobacteria,2TWC9@28211|Alphaproteobacteria,3JVP3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain	-	-	1.1.1.399,1.1.1.95	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R01513	RC00031	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh,2-Hacid_dh_C
SX1_k127_3389388_11	1297865.APJD01000007_gene1842	7.58e-34	132.0	COG3237@1|root,COG3237@2|Bacteria,1N7IJ@1224|Proteobacteria,2UG6K@28211|Alphaproteobacteria,3K1CB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the UPF0337 (CsbD) family	MA20_44945	-	-	-	-	-	-	-	-	-	-	-	CsbD
SX1_k127_3389388_6	1297865.APJD01000007_gene1843	2.568e-115	371.0	COG4101@1|root,COG4101@2|Bacteria,1RB8W@1224|Proteobacteria,2TUPM@28211|Alphaproteobacteria,3JRUV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Cupin	MA20_44940	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
SX1_k127_3389388_5	1297865.APJD01000007_gene1844	9.756e-154	486.0	COG1024@1|root,COG1024@2|Bacteria,1R446@1224|Proteobacteria,2U280@28211|Alphaproteobacteria,3JW63@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	-	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_3397912_11	1297865.APJD01000011_gene6603	2.209e-85	287.0	COG2146@1|root,COG2146@2|Bacteria,1RAKS@1224|Proteobacteria,2U5KH@28211|Alphaproteobacteria,3JY32@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rieske-like [2Fe-2S] domain	MA20_19305	-	-	ko:K05710	ko00360,ko01120,ko01220,map00360,map01120,map01220	M00545	R06782,R06783	RC00098	br01602,ko00000,ko00001,ko00002	-	-	-	Rieske
SX1_k127_3397912_4	1297865.APJD01000011_gene6602	1.198e-256	790.0	COG2159@1|root,COG2159@2|Bacteria,1N0C7@1224|Proteobacteria,2TRXY@28211|Alphaproteobacteria,3JQNV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Amidohydrolase	MA20_19310	-	-	ko:K07045	-	-	-	-	ko00000	-	-	-	Amidohydro_2
SX1_k127_3397912_3	1297865.APJD01000011_gene6601	3.543e-258	796.0	COG2159@1|root,COG2159@2|Bacteria,1MVTS@1224|Proteobacteria,2TU78@28211|Alphaproteobacteria,3JT24@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Amidohydrolase	MA20_19315	-	-	ko:K07045	-	-	-	-	ko00000	-	-	-	Amidohydro_2
SX1_k127_3397912_6	1297865.APJD01000011_gene6600	2.149e-213	663.0	COG0491@1|root,COG0491@2|Bacteria,1PKW8@1224|Proteobacteria,2TUW8@28211|Alphaproteobacteria,3JUHX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
SX1_k127_3397912_10	1297865.APJD01000011_gene6599	3.008e-93	307.0	COG1546@1|root,COG1546@2|Bacteria,1RHXH@1224|Proteobacteria,2UACN@28211|Alphaproteobacteria,3JQZR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the CinA family	MA20_19320	-	-	-	-	-	-	-	-	-	-	-	CinA
SX1_k127_3397912_2	1297865.APJD01000011_gene6598	4.32e-264	819.0	COG0845@1|root,COG0845@2|Bacteria,1MUI8@1224|Proteobacteria,2TSP0@28211|Alphaproteobacteria,3JT9C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	TIGRFAM type I secretion membrane fusion protein, HlyD family	MA20_19340	-	-	ko:K02022	-	-	-	-	ko00000	-	-	-	Biotin_lipoyl_2,HlyD,HlyD_3
SX1_k127_3397912_0	1297865.APJD01000011_gene6597	0.0	1117.0	COG4618@1|root,COG4618@2|Bacteria,1NTI5@1224|Proteobacteria,2TR17@28211|Alphaproteobacteria,3JRPY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	ABC transporter transmembrane region	MA20_19345	-	-	ko:K06148	-	-	-	-	ko00000,ko02000	3.A.1	-	-	ABC_membrane,ABC_tran
SX1_k127_3397912_9	1297865.APJD01000011_gene6596	1.317e-169	534.0	COG2050@1|root,COG2050@2|Bacteria,1R71D@1224|Proteobacteria,2U0RJ@28211|Alphaproteobacteria,3JXK8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	protein possibly involved in aromatic compounds catabolism	-	-	-	-	-	-	-	-	-	-	-	-	4HBT_3
SX1_k127_3397912_8	1297865.APJD01000011_gene6595	2.34e-181	570.0	COG0583@1|root,COG0583@2|Bacteria,1QBXF@1224|Proteobacteria,2U42U@28211|Alphaproteobacteria,3JV7Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_3397912_7	1297865.APJD01000011_gene6594	4.415e-195	631.0	COG0444@1|root,COG0444@2|Bacteria,1R4KB@1224|Proteobacteria,2TR0J@28211|Alphaproteobacteria,3JSW5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Belongs to the ABC transporter superfamily	dppD	-	-	ko:K02031	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
SX1_k127_3397912_1	1297865.APJD01000011_gene6593	8.355e-297	914.0	COG0154@1|root,COG0154@2|Bacteria,1MUVQ@1224|Proteobacteria,2TUKZ@28211|Alphaproteobacteria,3JST2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the amidase family	MA20_19360	-	6.3.5.6,6.3.5.7	ko:K02433	ko00970,ko01100,map00970,map01100	-	R03905,R04212	RC00010	ko00000,ko00001,ko01000,ko03029	-	-	-	Amidase
SX1_k127_3397912_12	1297865.APJD01000011_gene6592	2.806e-31	132.0	2AE88@1|root,31428@2|Bacteria,1N8ZI@1224|Proteobacteria,2UGI1@28211|Alphaproteobacteria,3K0Z7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3397912_5	1297865.APJD01000011_gene6591	2.773e-233	723.0	COG4608@1|root,COG4608@2|Bacteria,1NU4K@1224|Proteobacteria,2TQTV@28211|Alphaproteobacteria,3JUN9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the ABC transporter superfamily	MA20_19370	-	-	ko:K02032	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
SX1_k127_3405425_1	1297865.APJD01000006_gene4517	2.986e-50	179.0	COG1376@1|root,COG1376@2|Bacteria,1MVYT@1224|Proteobacteria,2TUXV@28211|Alphaproteobacteria,3JUKK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	L,D-transpeptidase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	YkuD
SX1_k127_3405425_0	1297865.APJD01000006_gene4516	9.4e-323	990.0	2EB2V@1|root,3353M@2|Bacteria,1NDM7@1224|Proteobacteria,2TV7H@28211|Alphaproteobacteria,3JQS2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF4403)	MA20_01580	-	-	-	-	-	-	-	-	-	-	-	DUF4403
SX1_k127_3430661_1	1297865.APJD01000005_gene3747	1.622e-255	788.0	COG0683@1|root,COG0683@2|Bacteria,1MXPJ@1224|Proteobacteria,2TSZ5@28211|Alphaproteobacteria,3JVDI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_3430661_0	1297865.APJD01000005_gene3748	0.0	1054.0	COG0028@1|root,COG0028@2|Bacteria,1MWC3@1224|Proteobacteria,2TTA2@28211|Alphaproteobacteria,3JS9T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Thiamine pyrophosphate enzyme, central domain	MA20_15555	-	2.2.1.6	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R00006,R00014,R00226,R03050,R04672,R04673,R08648	RC00027,RC00106,RC01192,RC02744,RC02893	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
SX1_k127_3434275_0	1297865.APJD01000007_gene1991	2.807e-303	930.0	COG0488@1|root,COG0488@2|Bacteria,1MU37@1224|Proteobacteria,2TS7G@28211|Alphaproteobacteria,3JSN6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	ABC transporter	chvD	-	-	ko:K15738	-	-	-	-	ko00000,ko02000	3.A.1.120.6	-	-	ABC_tran,ABC_tran_Xtn
SX1_k127_3434275_3	1230476.C207_00391	3.58e-112	364.0	COG2862@1|root,COG2862@2|Bacteria,1RANN@1224|Proteobacteria,2TSEF@28211|Alphaproteobacteria,3JR25@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized protein family, UPF0114	-	-	-	-	-	-	-	-	-	-	-	-	UPF0114
SX1_k127_3434275_1	1297865.APJD01000007_gene1993	8.819e-196	616.0	COG4995@1|root,COG4995@2|Bacteria,1R6PK@1224|Proteobacteria,2U09I@28211|Alphaproteobacteria,3JWPV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	TIR domain	-	-	-	-	-	-	-	-	-	-	-	-	TIR_2
SX1_k127_3434275_2	1230476.C207_00393	1.094e-132	424.0	COG2951@1|root,COG3409@1|root,COG2951@2|Bacteria,COG3409@2|Bacteria,1MUZ3@1224|Proteobacteria,2TRD2@28211|Alphaproteobacteria,3JSF9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Transglycosylase SLT domain	MA20_01345	-	-	-	-	-	-	-	-	-	-	-	PG_binding_1,SLT_2
SX1_k127_3470842_4	1297865.APJD01000011_gene6724	3.437e-87	289.0	COG2010@1|root,COG2010@2|Bacteria,1P1D4@1224|Proteobacteria,2UUQF@28211|Alphaproteobacteria,3K4N7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3470842_3	1297865.APJD01000011_gene6725	3.778e-134	432.0	COG2932@1|root,COG2932@2|Bacteria,1MXWS@1224|Proteobacteria,2TQJE@28211|Alphaproteobacteria,3JRDH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Peptidase S24-like	c1	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S24
SX1_k127_3470842_5	1297865.APJD01000011_gene6726	2.132e-70	239.0	COG3502@1|root,COG3502@2|Bacteria,1MZEQ@1224|Proteobacteria,2UBR3@28211|Alphaproteobacteria,3JZ4V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF952)	MA20_22095	-	-	-	-	-	-	-	-	-	-	-	DUF952
SX1_k127_3470842_1	1297865.APJD01000011_gene6727	6.953e-232	720.0	COG0167@1|root,COG0167@2|Bacteria,1MU7C@1224|Proteobacteria,2TRF8@28211|Alphaproteobacteria,3JSD5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor	pyrD	-	1.3.5.2	ko:K00254	ko00240,ko01100,map00240,map01100	M00051	R01868	RC00051	ko00000,ko00001,ko00002,ko01000	-	-	-	DHO_dh
SX1_k127_3470842_0	1297865.APJD01000011_gene6728	5.058e-271	836.0	COG0534@1|root,COG0534@2|Bacteria,1MV6B@1224|Proteobacteria,2TSKZ@28211|Alphaproteobacteria,3JS91@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	MatE	dinF	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03327	-	-	-	-	ko00000,ko02000	2.A.66.1	-	-	MatE
SX1_k127_3470842_2	1297865.APJD01000011_gene6729	1.144e-160	507.0	COG1234@1|root,COG1234@2|Bacteria,1Q4PW@1224|Proteobacteria,2TUHQ@28211|Alphaproteobacteria,3JTWA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Beta-lactamase superfamily domain	MA20_22080	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_2
SX1_k127_3470842_6	1297865.APJD01000011_gene6730	2.872e-58	202.0	2CAZC@1|root,32ZW8@2|Bacteria,1N86F@1224|Proteobacteria,2UGV9@28211|Alphaproteobacteria,3JZEQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_22075	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3474768_0	1297865.APJD01000004_gene5305	1.592e-260	804.0	COG4091@1|root,COG4091@2|Bacteria,1MUZX@1224|Proteobacteria,2TRZ0@28211|Alphaproteobacteria,3JSZI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	SAF	MA20_06800	-	1.1.1.3	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	M00017,M00018	R01773,R01775	RC00087	ko00000,ko00001,ko00002,ko01000	-	-	-	GFO_IDH_MocA,NAD_binding_3,SAF
SX1_k127_3474768_5	224911.27354970	5.724e-05	46.0	COG2897@1|root,COG2897@2|Bacteria,1MW4B@1224|Proteobacteria,2TR9R@28211|Alphaproteobacteria,3JT1H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rhodanese Homology Domain	sseA	-	2.8.1.1,2.8.1.2	ko:K01011	ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122	-	R01931,R03105,R03106	RC00214	ko00000,ko00001,ko01000	-	-	-	Rhodanese
SX1_k127_3474768_2	1297865.APJD01000004_gene5304	1.517e-177	557.0	COG5285@1|root,COG5285@2|Bacteria,1MWD5@1224|Proteobacteria,2U0FP@28211|Alphaproteobacteria,3JQUW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Phytanoyl-CoA dioxygenase (PhyH)	MA20_06795	-	1.14.11.55	ko:K10674	ko00260,ko01120,map00260,map01120	-	R08050	RC00661	ko00000,ko00001,ko01000	-	-	-	PhyH
SX1_k127_3474768_4	1297865.APJD01000004_gene5303	2.847e-137	438.0	COG1802@1|root,COG1802@2|Bacteria,1MY2M@1224|Proteobacteria,2TTYE@28211|Alphaproteobacteria,3JSY3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FCD	MA20_06790	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SX1_k127_3474768_1	1297865.APJD01000004_gene5302	7.473e-260	803.0	COG0624@1|root,COG0624@2|Bacteria,1MUSU@1224|Proteobacteria,2TV23@28211|Alphaproteobacteria,3JSS1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Peptidase family M28	-	-	3.4.17.11	ko:K01295	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20,Peptidase_M28
SX1_k127_3474768_3	1297865.APJD01000004_gene5301	3.796e-163	514.0	COG1595@1|root,COG1595@2|Bacteria,1MXVA@1224|Proteobacteria,2TV85@28211|Alphaproteobacteria,3JR9S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Belongs to the sigma-70 factor family. ECF subfamily	MA20_06780	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2,SnoaL_2
SX1_k127_3475762_0	1297865.APJD01000003_gene6132	0.0	1043.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JRP3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Efflux pump membrane transporter	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
SX1_k127_3475762_1	1297865.APJD01000003_gene6131	2.394e-240	748.0	COG0845@1|root,COG0845@2|Bacteria,1MU78@1224|Proteobacteria,2TSWK@28211|Alphaproteobacteria,3JSRV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K19595	-	M00768,M00769	-	-	ko00000,ko00002,ko01504,ko02000	2.A.6.2.25,2.A.6.2.34,8.A.1	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
SX1_k127_3475762_2	1297865.APJD01000003_gene6130	9.326e-233	724.0	COG1572@1|root,COG2755@1|root,COG2931@1|root,COG3210@1|root,COG4932@1|root,COG1572@2|Bacteria,COG2755@2|Bacteria,COG2931@2|Bacteria,COG3210@2|Bacteria,COG4932@2|Bacteria,1MU7T@1224|Proteobacteria,2TRVY@28211|Alphaproteobacteria,3JWUW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	QU	COG2931 RTX toxins and related Ca2 -binding proteins	-	-	-	-	-	-	-	-	-	-	-	-	Cadherin,HemolysinCabind
SX1_k127_3477280_6	1297865.APJD01000004_gene5300	1.602e-90	299.0	COG2128@1|root,COG2128@2|Bacteria,1RIKK@1224|Proteobacteria,2U9KG@28211|Alphaproteobacteria,3JX3V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	MA20_06775	-	-	-	-	-	-	-	-	-	-	-	CMD
SX1_k127_3477280_2	1297865.APJD01000004_gene5299	7.597e-181	567.0	COG0596@1|root,COG0596@2|Bacteria,1R9VJ@1224|Proteobacteria,2U26I@28211|Alphaproteobacteria,3JQRZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Alpha/beta hydrolase family	MA20_06765	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6
SX1_k127_3477280_5	1297865.APJD01000004_gene5298	1.79e-116	376.0	COG0350@1|root,COG0350@2|Bacteria,1MVF7@1224|Proteobacteria,2TV5U@28211|Alphaproteobacteria,3JTW0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	6-O-methylguanine DNA methyltransferase, DNA binding domain	ogt	-	2.1.1.63	ko:K00567	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DNA_binding_1
SX1_k127_3477280_1	1297865.APJD01000004_gene5297	4.986e-202	628.0	COG0491@1|root,COG0491@2|Bacteria,1NK1F@1224|Proteobacteria,2TR5Q@28211|Alphaproteobacteria,3JSQP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metallo-beta-lactamase superfamily	MA20_19225	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
SX1_k127_3477280_0	1297865.APJD01000004_gene5296	2.045e-267	823.0	COG1680@1|root,COG1680@2|Bacteria,1NHIY@1224|Proteobacteria,2U0A3@28211|Alphaproteobacteria,3JT7A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SX1_k127_3477280_4	1297865.APJD01000004_gene5295	9.389e-136	432.0	COG0625@1|root,COG0625@2|Bacteria,1RHSK@1224|Proteobacteria,2U5GF@28211|Alphaproteobacteria,3JWEW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase	MA20_19220	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C_2,GST_N_3
SX1_k127_3477280_3	1297865.APJD01000004_gene5294	5.918e-157	495.0	COG0179@1|root,COG0179@2|Bacteria,1MUPF@1224|Proteobacteria,2TQQG@28211|Alphaproteobacteria,3JQYM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Fumarylacetoacetate (FAA) hydrolase family	MA20_19215	-	5.3.3.10	ko:K01826	ko00350,ko01120,ko01220,map00350,map01120,map01220	M00533	R04379,R04482	RC01141,RC01162	ko00000,ko00001,ko00002,ko01000	-	-	-	FAA_hydrolase
SX1_k127_3481747_3	1297865.APJD01000014_gene480	7.443e-206	642.0	COG0477@1|root,COG2814@2|Bacteria,1MVVW@1224|Proteobacteria,2TVQU@28211|Alphaproteobacteria,3JVZP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
SX1_k127_3481747_0	1297865.APJD01000014_gene481	1.145e-272	840.0	COG0144@1|root,COG0144@2|Bacteria,1MV2Q@1224|Proteobacteria,2TS6U@28211|Alphaproteobacteria,3JTMA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family	sun1	-	2.1.1.176	ko:K03500	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltr_RsmB-F
SX1_k127_3481747_6	1297865.APJD01000014_gene482	5.34e-78	261.0	COG5331@1|root,COG5331@2|Bacteria,1N7DJ@1224|Proteobacteria,2U7D2@28211|Alphaproteobacteria,3JY8V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	MAPEG family	-	-	-	-	-	-	-	-	-	-	-	-	MAPEG
SX1_k127_3481747_4	1297865.APJD01000014_gene484	6.414e-189	592.0	COG1409@1|root,COG1409@2|Bacteria,1QI4K@1224|Proteobacteria,2TV5Q@28211|Alphaproteobacteria,3JSSF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Calcineurin-like phosphoesterase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos
SX1_k127_3481747_7	1297865.APJD01000014_gene485	1.642e-45	169.0	2AINI@1|root,3194Y@2|Bacteria,1N060@1224|Proteobacteria,2UC4S@28211|Alphaproteobacteria,3K074@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3481747_1	1297865.APJD01000014_gene486	2.727e-225	703.0	COG2130@1|root,COG2130@2|Bacteria,1MUC2@1224|Proteobacteria,2TQYM@28211|Alphaproteobacteria,3JRF5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	N-terminal domain of oxidoreductase	MA20_27525	-	1.1.1.1	ko:K00001,ko:K07119	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	-	R00623,R00754,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310	RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273	ko00000,ko00001,ko01000	-	-	-	ADH_N_2,ADH_zinc_N
SX1_k127_3481747_2	1297865.APJD01000014_gene487	4.901e-212	660.0	COG0516@1|root,COG0517@1|root,COG0516@2|Bacteria,COG0517@2|Bacteria,1MUJM@1224|Proteobacteria,2TQXC@28211|Alphaproteobacteria,3JSB9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth	guaB	GO:0003674,GO:0003824,GO:0003938,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	1.1.1.205,1.7.1.7	ko:K00088,ko:K00364	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	M00050	R01130,R01134,R08240	RC00143,RC00457,RC02207	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	CBS,IMPDH,NMO
SX1_k127_3504625_3	1297865.APJD01000009_gene2838	8.299e-239	738.0	COG0060@1|root,COG0060@2|Bacteria,1MVBQ@1224|Proteobacteria,2TR3N@28211|Alphaproteobacteria,3JRA9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)	ileS	-	6.1.1.5	ko:K01870	ko00970,map00970	M00359,M00360	R03656	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,tRNA-synt_1,zf-FPG_IleRS
SX1_k127_3504625_6	1297865.APJD01000009_gene2839	2.197e-98	325.0	COG0597@1|root,COG0597@2|Bacteria,1RGV9@1224|Proteobacteria,2UBUC@28211|Alphaproteobacteria,3JT06@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	MU	This protein specifically catalyzes the removal of signal peptides from prolipoproteins	lspA	-	3.4.23.36	ko:K03101	ko03060,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_A8
SX1_k127_3504625_4	1297865.APJD01000009_gene2840	4.303e-154	487.0	2AXUQ@1|root,31PVX@2|Bacteria,1R6KT@1224|Proteobacteria,2UGTF@28211|Alphaproteobacteria,3JU6Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3504625_1	1297865.APJD01000009_gene2841	3.54e-298	917.0	COG0612@1|root,COG0612@2|Bacteria,1MVST@1224|Proteobacteria,2TRFB@28211|Alphaproteobacteria,3JRIY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the peptidase M16 family	pqqF	-	-	ko:K07263	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M16,Peptidase_M16_C
SX1_k127_3504625_2	1297865.APJD01000009_gene2842	1.672e-281	893.0	COG0612@1|root,COG0612@2|Bacteria,1MU6R@1224|Proteobacteria,2TRMX@28211|Alphaproteobacteria,3JSBY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Peptidase M16 inactive domain	pqqG	-	-	ko:K07263,ko:K07623	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M16,Peptidase_M16_C
SX1_k127_3504625_10	1038867.AXAY01000026_gene1381	0.0005538	45.0	COG0587@1|root,COG0587@2|Bacteria,1MUE4@1224|Proteobacteria,2TRUB@28211|Alphaproteobacteria,3JUU5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase	dnaE2	GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496	2.7.7.7	ko:K02337,ko:K14162	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_alpha,HHH_6,PHP,tRNA_anti-codon
SX1_k127_3504625_8	1297865.APJD01000009_gene2843	2.18e-77	261.0	COG1186@1|root,COG1186@2|Bacteria,1RH75@1224|Proteobacteria,2U9M7@28211|Alphaproteobacteria,3JY9E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Class I peptide chain release factor	MA20_05665	GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0032268,GO:0032984,GO:0034248,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112	-	ko:K15034	-	-	-	-	ko00000,ko03012	-	-	-	RF-1
SX1_k127_3504625_9	1230476.C207_03509	1.495e-72	248.0	COG3474@1|root,COG3474@2|Bacteria,1RGSY@1224|Proteobacteria,2U84R@28211|Alphaproteobacteria,3JYUJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome c	-	-	-	ko:K08738	ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	3.D.4.6	-	-	Cytochrom_C
SX1_k127_3504625_7	1297865.APJD01000009_gene2845	5.448e-85	281.0	COG0346@1|root,COG0346@2|Bacteria,1RI06@1224|Proteobacteria,2U77N@28211|Alphaproteobacteria,3JYGH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	lguL	-	4.4.1.5	ko:K01759	ko00620,map00620	-	R02530	RC00004,RC00740	ko00000,ko00001,ko01000	-	-	-	Glyoxalase
SX1_k127_3504625_5	1297865.APJD01000009_gene2846	9.225e-116	373.0	2BXMA@1|root,2ZBQ1@2|Bacteria,1MXZ1@1224|Proteobacteria,2TUF6@28211|Alphaproteobacteria,3JT8C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	(twin-arginine translocation) pathway signal	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3504625_0	1297865.APJD01000009_gene2847	0.0	1085.0	COG2303@1|root,COG2303@2|Bacteria,1MU3F@1224|Proteobacteria,2TT3C@28211|Alphaproteobacteria,3JREI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	GMC oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	GMC_oxred_C,GMC_oxred_N
SX1_k127_3506678_5	1297865.APJD01000005_gene3780	1.255e-203	647.0	COG5360@1|root,COG5360@2|Bacteria,1MZ5X@1224|Proteobacteria,2TVDH@28211|Alphaproteobacteria,3JXJC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Heparinase II/III N-terminus	-	-	-	-	-	-	-	-	-	-	-	-	Hepar_II_III,Hepar_II_III_N
SX1_k127_3506678_0	1297865.APJD01000005_gene3779	0.0	1423.0	COG0673@1|root,COG1063@1|root,COG0673@2|Bacteria,COG1063@2|Bacteria,1PS9M@1224|Proteobacteria,2V4GN@28211|Alphaproteobacteria,3JWNE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	inositol 2-dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	ADH_zinc_N,GFO_IDH_MocA
SX1_k127_3506678_2	1297865.APJD01000005_gene3778	1.229e-274	844.0	COG3664@1|root,COG3664@2|Bacteria,1MX9Q@1224|Proteobacteria,2TWU2@28211|Alphaproteobacteria,3JXZ2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Glycosyl hydrolase catalytic core	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_cc
SX1_k127_3506678_3	1297865.APJD01000005_gene3777	4.076e-274	844.0	COG0438@1|root,COG0438@2|Bacteria,1PDZE@1224|Proteobacteria,2TR1N@28211|Alphaproteobacteria,3JVFV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_trans_4_2,Glyco_trans_4_4
SX1_k127_3506678_1	1297865.APJD01000005_gene3776	3.595e-282	874.0	COG1004@1|root,COG1004@2|Bacteria,1MW5U@1224|Proteobacteria,2TREV@28211|Alphaproteobacteria,3JW49@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	UDP binding domain	-	-	1.1.1.132	ko:K00066	ko00051,ko00520,ko02020,map00051,map00520,map02020	-	R00880	RC00291	ko00000,ko00001,ko01000	-	-	-	UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N
SX1_k127_3506678_6	1297865.APJD01000005_gene3775	8.032e-150	477.0	COG2227@1|root,COG2227@2|Bacteria,1QBZK@1224|Proteobacteria,2U444@28211|Alphaproteobacteria,3JWUX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Nodulation protein S (NodS)	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
SX1_k127_3506678_9	398525.KB900701_gene3804	9.577e-130	421.0	COG0500@1|root,COG2226@2|Bacteria,1RF1C@1224|Proteobacteria,2U86S@28211|Alphaproteobacteria,3JXW1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
SX1_k127_3506678_8	1297865.APJD01000005_gene3773	4.811e-136	437.0	COG4627@1|root,COG4627@2|Bacteria,1NKXY@1224|Proteobacteria,2UJD3@28211|Alphaproteobacteria,3JUR8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_23
SX1_k127_3506678_4	1297865.APJD01000005_gene3772	3.729e-262	810.0	COG2244@1|root,COG2244@2|Bacteria,1R4N2@1224|Proteobacteria,2TVGI@28211|Alphaproteobacteria,3JW34@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	polysaccharide biosynthetic process	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3506678_7	1297865.APJD01000005_gene3771	1.848e-138	439.0	COG3307@1|root,COG3307@2|Bacteria,1R9A7@1224|Proteobacteria,2TR72@28211|Alphaproteobacteria,3JW41@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	O-Antigen ligase	-	-	-	-	-	-	-	-	-	-	-	-	Wzy_C
SX1_k127_352464_16	1230476.C207_00433	2.069e-84	280.0	COG1653@1|root,COG1653@2|Bacteria,1R4UG@1224|Proteobacteria,2TUMF@28211|Alphaproteobacteria,3JWW5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Bacterial extracellular solute-binding protein	-	-	-	ko:K02027	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	SBP_bac_1,SBP_bac_8
SX1_k127_352464_6	1297865.APJD01000014_gene708	1.614e-217	681.0	COG0395@1|root,COG0395@2|Bacteria,1MXEM@1224|Proteobacteria,2TUQV@28211|Alphaproteobacteria,3JR0U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Binding-protein-dependent transport system inner membrane component	ycjP	-	-	ko:K02026	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	BPD_transp_1
SX1_k127_352464_8	1297865.APJD01000014_gene709	7.085e-185	578.0	COG1175@1|root,COG1175@2|Bacteria,1NAZ3@1224|Proteobacteria,2U2JJ@28211|Alphaproteobacteria,3JR66@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02025	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	BPD_transp_1
SX1_k127_352464_9	1297865.APJD01000014_gene710	3.944e-184	578.0	COG0524@1|root,COG0524@2|Bacteria,1MV5B@1224|Proteobacteria,2TSUM@28211|Alphaproteobacteria,3JV0G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway	rbsK	-	2.7.1.15	ko:K00852	ko00030,map00030	-	R01051,R02750	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	PfkB
SX1_k127_352464_14	1297865.APJD01000014_gene711	1.549e-92	305.0	COG4154@1|root,COG4154@2|Bacteria,1RJ03@1224|Proteobacteria,2U9P9@28211|Alphaproteobacteria,3JXV6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	RbsD / FucU transport protein family	-	-	5.1.3.29	ko:K02431	-	-	R10764	RC00563	ko00000,ko01000	-	-	-	RbsD_FucU
SX1_k127_352464_0	1297865.APJD01000014_gene712	0.0	1579.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,3JXR9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde dehydrogenase family	aldA	-	1.2.1.3	ko:K00128	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	M00135	R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
SX1_k127_352464_5	1297865.APJD01000014_gene713	5.033e-222	691.0	COG0274@1|root,COG0274@2|Bacteria,1N8AG@1224|Proteobacteria,2TS26@28211|Alphaproteobacteria,3JRBY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate	deoC	-	4.1.2.4	ko:K01619	ko00030,map00030	-	R01066	RC00436,RC00437	ko00000,ko00001,ko01000	-	-	-	DeoC
SX1_k127_352464_11	1297865.APJD01000014_gene714	1.456e-164	520.0	COG1349@1|root,COG1349@2|Bacteria,1MY40@1224|Proteobacteria,2U63I@28211|Alphaproteobacteria,3JW45@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	DeoR C terminal sensor domain	-	-	-	ko:K11534	-	-	-	-	ko00000,ko03000	-	-	-	DeoRC,HTH_DeoR
SX1_k127_352464_4	1230476.C207_00425	1.705e-242	754.0	COG1879@1|root,COG1879@2|Bacteria,1RDXP@1224|Proteobacteria,2TV3C@28211|Alphaproteobacteria,3JTN5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Periplasmic binding protein domain	-	-	-	ko:K10439	ko02010,ko02030,map02010,map02030	M00212	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	Peripla_BP_4
SX1_k127_352464_7	1297865.APJD01000014_gene716	4.782e-194	612.0	COG1172@1|root,COG1172@2|Bacteria,1MX7D@1224|Proteobacteria,2U0D6@28211|Alphaproteobacteria,3JT3E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Branched-chain amino acid transport system / permease component	-	-	-	ko:K10440	ko02010,map02010	M00212	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	BPD_transp_2
SX1_k127_352464_3	1297865.APJD01000014_gene717	9.842e-320	981.0	COG1129@1|root,COG1129@2|Bacteria,1MU22@1224|Proteobacteria,2TQJV@28211|Alphaproteobacteria,3JWV0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	ATPases associated with a variety of cellular activities	-	-	3.6.3.17	ko:K10441,ko:K10545	ko02010,map02010	M00212,M00215	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19,3.A.1.2.4	-	-	ABC_tran
SX1_k127_352464_19	1038860.AXAP01000102_gene4499	2.155e-15	78.0	COG5285@1|root,COG5285@2|Bacteria,1R9W1@1224|Proteobacteria,2U5N9@28211|Alphaproteobacteria,3JYDE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Phytanoyl-CoA dioxygenase (PhyH)	-	-	-	-	-	-	-	-	-	-	-	-	PhyH
SX1_k127_352464_15	1297865.APJD01000014_gene718	3.222e-85	284.0	2A9WP@1|root,30Z4N@2|Bacteria,1RK2B@1224|Proteobacteria,2UAWK@28211|Alphaproteobacteria,3JZXA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_352464_10	1297865.APJD01000014_gene719	7.797e-167	524.0	COG1024@1|root,COG1024@2|Bacteria,1R6CV@1224|Proteobacteria,2TSB3@28211|Alphaproteobacteria,3JZ57@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	-	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_352464_18	1297865.APJD01000014_gene720	4.214e-45	165.0	COG3750@1|root,COG3750@2|Bacteria,1N27S@1224|Proteobacteria,2UC5V@28211|Alphaproteobacteria,3K0A0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized protein conserved in bacteria (DUF2312)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2312
SX1_k127_352464_2	1297865.APJD01000014_gene721	0.0	1004.0	COG0642@1|root,COG2205@2|Bacteria,1R72I@1224|Proteobacteria,2TU7S@28211|Alphaproteobacteria,3K0JD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	4HB_MCP_1,HAMP,HATPase_c,HisKA,PAS_4
SX1_k127_352464_12	1297865.APJD01000014_gene722	4.977e-125	401.0	COG2197@1|root,COG2197@2|Bacteria,1R9ZF@1224|Proteobacteria,2U9TQ@28211|Alphaproteobacteria,3JZEB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
SX1_k127_352464_17	1297865.APJD01000014_gene723	3.689e-62	215.0	2BPKV@1|root,32IDW@2|Bacteria,1P12B@1224|Proteobacteria,2UUJZ@28211|Alphaproteobacteria,3K4XV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_352464_1	1297865.APJD01000014_gene725	0.0	1167.0	COG3696@1|root,COG3696@2|Bacteria,1NUIV@1224|Proteobacteria,2TRWM@28211|Alphaproteobacteria,3JRJE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K15726	-	-	-	-	ko00000,ko02000	2.A.6.1.2	-	-	ACR_tran
SX1_k127_3534295_2	1297865.APJD01000005_gene3523	5.023e-18	83.0	COG0405@1|root,COG0405@2|Bacteria,1MUV6@1224|Proteobacteria,2TSME@28211|Alphaproteobacteria,3JQSX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Gamma-glutamyltranspeptidase	MA20_16750	-	2.3.2.2,3.4.19.13	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	-	R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935	RC00064,RC00090,RC00096	ko00000,ko00001,ko01000,ko01002	-	-	-	G_glu_transpept
SX1_k127_3534295_0	446470.Snas_5606	7.911e-77	265.0	COG1116@1|root,COG1116@2|Bacteria,2GN33@201174|Actinobacteria,4EZNM@85014|Glycomycetales	201174|Actinobacteria	P	ATPases associated with a variety of cellular activities	-	-	-	ko:K02049	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	AAA_assoc_C,ABC_tran
SX1_k127_3534295_1	1123023.JIAI01000002_gene4972	6.211e-59	216.0	COG0600@1|root,COG0600@2|Bacteria,2GP2J@201174|Actinobacteria	201174|Actinobacteria	P	ABC-type nitrate sulfonate bicarbonate transport system, permease component	-	-	-	ko:K02050	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	BPD_transp_1
SX1_k127_3542242_0	1297865.APJD01000011_gene6837	0.0	1461.0	COG0745@1|root,COG2203@1|root,COG4191@1|root,COG5002@1|root,COG0745@2|Bacteria,COG2203@2|Bacteria,COG4191@2|Bacteria,COG5002@2|Bacteria,1RCM9@1224|Proteobacteria,2TQQ9@28211|Alphaproteobacteria,3JR0R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Response regulator receiver	-	-	-	-	-	-	-	-	-	-	-	-	CHASE3,GAF_2,HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9,Response_reg
SX1_k127_3557397_10	1038860.AXAP01000004_gene5041	3.559e-59	205.0	COG2080@1|root,COG2080@2|Bacteria,1RD8C@1224|Proteobacteria,2U5BM@28211|Alphaproteobacteria,3JSU8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	[2Fe-2S] binding domain	coxS	-	1.2.5.3	ko:K03518	-	-	R11168	RC02800	ko00000,ko01000	-	-	-	Fer2,Fer2_2
SX1_k127_3557397_0	1297865.APJD01000021_gene3032	0.0	1200.0	COG4993@1|root,COG4993@2|Bacteria,1MUQX@1224|Proteobacteria,2TS2Q@28211|Alphaproteobacteria,3JRZ3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	PQQ-like domain	-	-	-	-	-	-	-	-	-	-	-	-	PQQ
SX1_k127_3557397_6	1297865.APJD01000021_gene3031	8.813e-249	778.0	COG0834@1|root,COG2010@1|root,COG0834@2|Bacteria,COG2010@2|Bacteria,1MVR7@1224|Proteobacteria,2TVH7@28211|Alphaproteobacteria,3JRDC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CET	Bacterial periplasmic substrate-binding proteins	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3,SBP_bac_3
SX1_k127_3557397_9	1297865.APJD01000021_gene3030	8.226e-136	434.0	COG2197@1|root,COG2197@2|Bacteria,1P4TD@1224|Proteobacteria,2U06A@28211|Alphaproteobacteria,3JWK9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
SX1_k127_3557397_8	1297865.APJD01000021_gene3029	1.202e-161	510.0	COG2197@1|root,COG2197@2|Bacteria,1P4TD@1224|Proteobacteria,2U06A@28211|Alphaproteobacteria,3JWKG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
SX1_k127_3557397_4	1297865.APJD01000021_gene3028	1.294e-280	874.0	COG0642@1|root,COG0745@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,1MUY7@1224|Proteobacteria,2TR1M@28211|Alphaproteobacteria,3JQQ0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,Response_reg
SX1_k127_3557397_5	1297865.APJD01000021_gene3027	9.11e-255	786.0	COG3287@1|root,COG3287@2|Bacteria,1MVUZ@1224|Proteobacteria,2TRRI@28211|Alphaproteobacteria,3JSSM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	FIST_C	-	-	-	-	-	-	-	-	-	-	-	-	FIST,FIST_C
SX1_k127_3557397_1	1297865.APJD01000021_gene3026	0.0	1152.0	COG0840@1|root,COG2770@1|root,COG0840@2|Bacteria,COG2770@2|Bacteria,1MU9B@1224|Proteobacteria,2TQR7@28211|Alphaproteobacteria,3JSI9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NT	chemotaxis	MA20_39440	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	HAMP,MCPsignal
SX1_k127_3557397_2	1297865.APJD01000021_gene3025	3.049e-311	960.0	COG0477@1|root,COG2814@2|Bacteria,1MVKJ@1224|Proteobacteria,2TUK5@28211|Alphaproteobacteria,3JQXB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	MA20_39450	-	-	-	-	-	-	-	-	-	-	-	Sugar_tr
SX1_k127_3557397_7	1297865.APJD01000021_gene3024	2.408e-176	553.0	COG1877@1|root,COG1877@2|Bacteria,1RGY2@1224|Proteobacteria,2U9NF@28211|Alphaproteobacteria,3JS8I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Removes the phosphate from trehalose 6-phosphate to produce free trehalose	otsB	-	3.1.3.12	ko:K01087	ko00500,ko01100,map00500,map01100	-	R02778	RC00017	ko00000,ko00001,ko01000	-	-	-	Trehalose_PPase
SX1_k127_3557397_3	1230476.C207_03929	5.821e-311	953.0	COG0380@1|root,COG0380@2|Bacteria,1MUIY@1224|Proteobacteria,2TQMP@28211|Alphaproteobacteria,3JUU9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor	otsA	-	2.4.1.15,2.4.1.347	ko:K00697	ko00500,ko01100,map00500,map01100	-	R02737	RC00005,RC00049,RC02748	ko00000,ko00001,ko01000,ko01003	-	GT20	-	Glyco_transf_20
SX1_k127_3557397_11	1408418.JNJH01000020_gene967	4.695e-12	67.0	COG1961@1|root,COG1961@2|Bacteria,1MWCZ@1224|Proteobacteria,2TRIY@28211|Alphaproteobacteria,2JV8U@204441|Rhodospirillales	204441|Rhodospirillales	L	Recombinase zinc beta ribbon domain	-	-	-	-	-	-	-	-	-	-	-	-	Recombinase,Resolvase,Zn_ribbon_recom
SX1_k127_3562629_4	1037409.BJ6T_28130	4.846e-33	131.0	28Y26@1|root,2ZJXS@2|Bacteria,1PAKD@1224|Proteobacteria,2UYIU@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3562629_5	1230476.C207_03450	3.239e-25	107.0	COG1219@1|root,COG1219@2|Bacteria,1PAWA@1224|Proteobacteria,2UYXN@28211|Alphaproteobacteria,3K5KF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3562629_3	1297865.APJD01000006_gene4555	2.188e-96	323.0	2CHJ3@1|root,332B4@2|Bacteria,1NC0E@1224|Proteobacteria,2UGT4@28211|Alphaproteobacteria,3JXF1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3562629_2	1297865.APJD01000006_gene4554	6.481e-140	448.0	COG0596@1|root,COG0596@2|Bacteria,1R3U1@1224|Proteobacteria,2TVFV@28211|Alphaproteobacteria,3JQPU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Alpha/beta hydrolase family	MA20_01735	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
SX1_k127_3562629_1	1297865.APJD01000006_gene4553	4.049e-154	493.0	COG0730@1|root,COG0730@2|Bacteria,1PJR4@1224|Proteobacteria,2TU14@28211|Alphaproteobacteria,3JSQH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sulfite exporter TauE/SafE	MA20_01715	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
SX1_k127_3562629_0	1297865.APJD01000006_gene4552	9.756e-289	888.0	COG0534@1|root,COG0534@2|Bacteria,1MVRV@1224|Proteobacteria,2TS4Z@28211|Alphaproteobacteria,3JVP5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	MatE	-	-	-	-	-	-	-	-	-	-	-	-	MatE
SX1_k127_356819_6	1297865.APJD01000019_gene3205	9.054e-08	53.0	COG2358@1|root,COG2358@2|Bacteria,1N6K6@1224|Proteobacteria,2TTP7@28211|Alphaproteobacteria,3JRR7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	NMT1-like family	-	-	-	-	-	-	-	-	-	-	-	-	NMT1_3
SX1_k127_356819_5	1297865.APJD01000019_gene3206	2.298e-59	206.0	COG2154@1|root,COG2154@2|Bacteria,1MZ5Q@1224|Proteobacteria,2UBWN@28211|Alphaproteobacteria,3JZHK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	pterin-4-alpha-carbinolamine dehydratase	phhB	-	4.2.1.96	ko:K01724	ko00790,map00790	-	R04734	RC01208	ko00000,ko00001,ko01000,ko04147	-	-	-	Pterin_4a
SX1_k127_356819_4	1297865.APJD01000019_gene3207	1.779e-75	254.0	COG3339@1|root,COG3339@2|Bacteria,1MZR5@1224|Proteobacteria,2UCIB@28211|Alphaproteobacteria,3JYQE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1232)	MA20_25305	-	-	-	-	-	-	-	-	-	-	-	DUF1232
SX1_k127_356819_0	1297865.APJD01000019_gene3208	1.503e-213	665.0	COG0604@1|root,COG0604@2|Bacteria,1MWRK@1224|Proteobacteria,2TQMF@28211|Alphaproteobacteria,3JRI0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Zinc-binding dehydrogenase	MA20_25320	-	1.1.1.1,1.6.5.5	ko:K00001,ko:K00344	ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	-	R00623,R00754,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310	RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_zinc_N
SX1_k127_356819_1	1297865.APJD01000019_gene3209	7.077e-177	556.0	COG1028@1|root,COG1028@2|Bacteria,1PFUB@1224|Proteobacteria,2U149@28211|Alphaproteobacteria,3JRKA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	MA20_25325	-	-	-	-	-	-	-	-	-	-	-	adh_short,adh_short_C2
SX1_k127_356819_2	1230476.C207_04120	5.395e-119	383.0	COG5342@1|root,COG5342@2|Bacteria,1R46Z@1224|Proteobacteria,2U5KW@28211|Alphaproteobacteria,3JVKM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	invasion associated locus B	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_356819_3	1297865.APJD01000019_gene3211	1.705e-79	265.0	COG0820@1|root,COG0820@2|Bacteria,1MUYK@1224|Proteobacteria,2TQT3@28211|Alphaproteobacteria,3JUHU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs	rlmN	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360	2.1.1.192	ko:K06941	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Radical_SAM
SX1_k127_3581194_0	1297865.APJD01000010_gene4944	8.4e-323	989.0	COG0557@1|root,COG0557@2|Bacteria,1MUS6@1224|Proteobacteria,2TRC1@28211|Alphaproteobacteria,3JRHJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs	rnr	GO:0000175,GO:0003674,GO:0003724,GO:0003824,GO:0004386,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008408,GO:0008997,GO:0009056,GO:0009057,GO:0009266,GO:0009409,GO:0009628,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016896,GO:0017111,GO:0019222,GO:0019439,GO:0034458,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:1901360,GO:1901361,GO:1901575	-	ko:K12573	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03016,ko03019	-	-	-	RNB,S1
SX1_k127_3581194_1	1230476.C207_04177	1.255e-90	304.0	COG5349@1|root,COG5349@2|Bacteria,1MZDD@1224|Proteobacteria,2UCM4@28211|Alphaproteobacteria,3JYRF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF983)	MA20_36345	-	-	-	-	-	-	-	-	-	-	-	DUF983
SX1_k127_3581194_2	1297865.APJD01000010_gene4942	2.041e-69	236.0	COG0494@1|root,COG0494@2|Bacteria,1N8EV@1224|Proteobacteria,2TTNV@28211|Alphaproteobacteria,3JUJI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes	MA20_36340	-	-	-	-	-	-	-	-	-	-	-	NUDIX
SX1_k127_3593295_15	1297865.APJD01000006_gene4451	3.275e-33	129.0	COG0625@1|root,COG0625@2|Bacteria,1NF66@1224|Proteobacteria,2TVE4@28211|Alphaproteobacteria,3JRJ5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, N-terminal domain	MA20_01250	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C_2,GST_N_2,GST_N_3
SX1_k127_3593295_10	1297865.APJD01000006_gene4452	7.97e-96	315.0	COG0662@1|root,COG0662@2|Bacteria,1RFQ6@1224|Proteobacteria,2U4AV@28211|Alphaproteobacteria,3JWI4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	AraC-like ligand binding domain	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,Cupin_2
SX1_k127_3593295_12	1297865.APJD01000006_gene4453	3.506e-44	162.0	2ERZB@1|root,33JIF@2|Bacteria,1N1EU@1224|Proteobacteria,2UD07@28211|Alphaproteobacteria,3K01K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3593295_11	1297865.APJD01000006_gene4454	6.883e-69	234.0	2A8W6@1|root,30XZI@2|Bacteria,1RHFY@1224|Proteobacteria,2U9DG@28211|Alphaproteobacteria,3JZF7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3593295_2	1297865.APJD01000006_gene4455	3.028e-244	755.0	COG4948@1|root,COG4948@2|Bacteria,1MW5B@1224|Proteobacteria,2UNXP@28211|Alphaproteobacteria,3JSCB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain	MA20_01265	-	4.2.1.6	ko:K01684	ko00052,ko01100,ko01120,map00052,map01100,map01120	M00552	R03033	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	MR_MLE_C,MR_MLE_N
SX1_k127_3593295_1	1297865.APJD01000006_gene4456	1.1e-279	860.0	COG0683@1|root,COG0683@2|Bacteria,1MV1Z@1224|Proteobacteria,2TRTD@28211|Alphaproteobacteria,3JSR4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_3593295_6	1297865.APJD01000006_gene4457	4.512e-187	584.0	COG2207@1|root,COG3708@1|root,COG2207@2|Bacteria,COG3708@2|Bacteria,1MWTF@1224|Proteobacteria,2TTWC@28211|Alphaproteobacteria,3JRNX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial transcription activator, effector binding domain	MA20_01270	-	-	ko:K13652,ko:K13653	-	-	-	-	ko00000,ko03000	-	-	-	GyrI-like,HTH_18
SX1_k127_3593295_18	1230476.C207_04688	1.316e-07	53.0	COG0621@1|root,COG0621@2|Bacteria,1MUCS@1224|Proteobacteria,2TRYD@28211|Alphaproteobacteria,3JTP7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	MiaB-like tRNA modifying enzyme	mtaB	GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035598,GO:0035600,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050497,GO:0071704,GO:0090304,GO:1901360	2.8.4.5	ko:K18707	-	-	R10649	RC00003,RC03221	ko00000,ko01000,ko03016	-	-	-	Radical_SAM,UPF0004
SX1_k127_3593295_5	398525.KB900701_gene6785	7.097e-205	655.0	COG0142@1|root,COG0142@2|Bacteria,1MUK6@1224|Proteobacteria,2TSDZ@28211|Alphaproteobacteria,3JRJF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Belongs to the FPP GGPP synthase family	ispB	GO:0003674,GO:0003824,GO:0004659,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009108,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0042180,GO:0042181,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901615,GO:1901617,GO:1901661,GO:1901663	2.5.1.90	ko:K02523	ko00900,ko01110,map00900,map01110	-	R09248	RC00279	ko00000,ko00001,ko01000,ko01006	-	-	-	polyprenyl_synt
SX1_k127_3593295_14	1230476.C207_05686	2.103e-38	144.0	2E3KZ@1|root,32YJ8@2|Bacteria,1N7A7@1224|Proteobacteria,2UFMR@28211|Alphaproteobacteria,3K0FM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative prokaryotic signal transducing protein	MA20_42240	-	-	-	-	-	-	-	-	-	-	-	DUF2007
SX1_k127_3593295_8	1297865.APJD01000006_gene4460	8.862e-166	523.0	COG4123@1|root,COG4123@2|Bacteria,1MXEQ@1224|Proteobacteria,2TUBR@28211|Alphaproteobacteria,3JWJT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Methyltransferase small domain	yfiC	-	2.1.1.223	ko:K15460	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	MTS
SX1_k127_3593295_17	1297865.APJD01000006_gene4461	1.763e-09	64.0	2AH17@1|root,317AA@2|Bacteria,1NJF6@1224|Proteobacteria,2UM4F@28211|Alphaproteobacteria,3K222@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3593295_7	1230476.C207_05683	2.972e-178	561.0	COG0616@1|root,COG0616@2|Bacteria,1MUXE@1224|Proteobacteria,2TQZP@28211|Alphaproteobacteria,3JRZA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	OU	Peptidase family S49	sohB	-	-	ko:K04773,ko:K04774	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_S49
SX1_k127_3593295_13	172088.AUGA01000004_gene4060	2.053e-40	152.0	2AEVZ@1|root,314TJ@2|Bacteria,1N6PC@1224|Proteobacteria,2UF9D@28211|Alphaproteobacteria,3K13D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3593295_4	1297865.APJD01000006_gene4464	2.051e-213	663.0	COG0752@1|root,COG0752@2|Bacteria,1MVCJ@1224|Proteobacteria,2TS2N@28211|Alphaproteobacteria,3JQY2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	glycyl-tRNA synthetase alpha subunit	glyQ	-	6.1.1.14	ko:K01878	ko00970,map00970	M00360	R03654	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_2e
SX1_k127_3593295_0	1297865.APJD01000006_gene4465	0.0	1363.0	COG0751@1|root,COG0751@2|Bacteria,1MV2F@1224|Proteobacteria,2TQKJ@28211|Alphaproteobacteria,3JRW9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Glycyl-tRNA synthetase beta subunit	glyS	-	6.1.1.14	ko:K01879	ko00970,map00970	M00360	R03654	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DALR_1,tRNA_synt_2f
SX1_k127_3593295_9	1297865.APJD01000006_gene4466	1.284e-123	396.0	COG0500@1|root,COG0500@2|Bacteria,1R555@1224|Proteobacteria,2U4Z7@28211|Alphaproteobacteria,3JVDN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Tellurite resistance protein TehB	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_25
SX1_k127_3593295_3	1297865.APJD01000006_gene4467	2.165e-218	680.0	29JCV@1|root,306AB@2|Bacteria,1R3WP@1224|Proteobacteria,2U2MK@28211|Alphaproteobacteria,3JWI9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3601956_2	1297865.APJD01000003_gene6398	1.45e-135	434.0	COG2197@1|root,COG2197@2|Bacteria,1P4TD@1224|Proteobacteria,2U06A@28211|Alphaproteobacteria,3JSMM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	transcriptional regulator, LuxR family	MA20_19670	GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
SX1_k127_3601956_0	1297865.APJD01000003_gene6397	0.0	1088.0	COG0477@1|root,COG0477@2|Bacteria,1MU46@1224|Proteobacteria,2TRAP@28211|Alphaproteobacteria,3JS50@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	mtbA	-	-	-	-	-	-	-	-	-	-	-	Sugar_tr
SX1_k127_3601956_5	398525.KB900701_gene802	5.507e-83	278.0	COG0432@1|root,COG0432@2|Bacteria,1RH13@1224|Proteobacteria,2U945@28211|Alphaproteobacteria,3JYEH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterised protein family UPF0047	-	-	-	-	-	-	-	-	-	-	-	-	UPF0047
SX1_k127_3601956_4	1297865.APJD01000003_gene6395	5.701e-101	330.0	2E3E3@1|root,32YD6@2|Bacteria,1N9CW@1224|Proteobacteria,2UH8F@28211|Alphaproteobacteria,3JTZH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3601956_3	1297865.APJD01000003_gene6394	4.12e-135	431.0	COG3917@1|root,COG3917@2|Bacteria,1MWB9@1224|Proteobacteria,2U07P@28211|Alphaproteobacteria,3JUIQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	2-hydroxychromene-2-carboxylate isomerase	-	-	-	-	-	-	-	-	-	-	-	-	DSBA
SX1_k127_3601956_6	1245469.S58_07670	2.729e-42	158.0	COG5336@1|root,COG5336@2|Bacteria,1NHIS@1224|Proteobacteria,2UFJJ@28211|Alphaproteobacteria,3JZII@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex	atpI	-	-	ko:K02116	-	-	-	-	ko00000,ko00194	3.A.2.1	-	-	ATPase_gene1
SX1_k127_3601956_1	1297865.APJD01000003_gene6392	1.449e-148	472.0	COG0356@1|root,COG0356@2|Bacteria,1MV87@1224|Proteobacteria,2TRNV@28211|Alphaproteobacteria,3JTDK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	it plays a direct role in the translocation of protons across the membrane	atpB	-	-	ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko03110	3.A.2.1	-	-	ATP-synt_A
SX1_k127_3601956_7	172088.AUGA01000007_gene8477	6.88e-37	141.0	COG0636@1|root,COG0636@2|Bacteria,1MZBU@1224|Proteobacteria,2UFPN@28211|Alphaproteobacteria,3K02Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation	atpE	-	-	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt_C
SX1_k127_3601956_8	1297865.APJD01000003_gene6390	7.398e-27	109.0	COG0711@1|root,COG0711@2|Bacteria,1MZGU@1224|Proteobacteria,2UBVW@28211|Alphaproteobacteria,3JR6Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (By similarity)	atpF2	-	-	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt_B
SX1_k127_3619419_2	1297865.APJD01000007_gene2243	1.739e-212	663.0	COG1653@1|root,COG1653@2|Bacteria,1MUNZ@1224|Proteobacteria,2U05K@28211|Alphaproteobacteria,3JWRT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Bacterial extracellular solute-binding protein	-	-	-	ko:K02027	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	SBP_bac_1,TAT_signal
SX1_k127_3619419_3	1297865.APJD01000007_gene2244	2.793e-181	570.0	COG0346@1|root,COG0346@2|Bacteria,1MZT5@1224|Proteobacteria,2U4GS@28211|Alphaproteobacteria,3JV3A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glyoxalase-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase_3
SX1_k127_3619419_1	1297865.APJD01000007_gene2245	9.89e-308	945.0	COG0665@1|root,COG0665@2|Bacteria,1MVGP@1224|Proteobacteria,2TRX9@28211|Alphaproteobacteria,3JT0G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	FAD dependent oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	DAO
SX1_k127_3619419_0	1297865.APJD01000007_gene2246	0.0	996.0	COG1123@1|root,COG4172@2|Bacteria,1MU09@1224|Proteobacteria,2TQP0@28211|Alphaproteobacteria,3JRAE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the ABC transporter superfamily	-	-	-	ko:K02031,ko:K02032	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
SX1_k127_3623642_11	1297865.APJD01000019_gene3265	1.27e-99	325.0	COG4978@1|root,COG4978@2|Bacteria,1R4X9@1224|Proteobacteria,2TUZK@28211|Alphaproteobacteria,3JTV1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KT	Bacterial transcription activator, effector binding domain	MA20_43725	-	-	-	-	-	-	-	-	-	-	-	GyrI-like
SX1_k127_3623642_7	1297865.APJD01000019_gene3264	2.038e-142	455.0	COG2968@1|root,COG2968@2|Bacteria,1RH7T@1224|Proteobacteria,2U981@28211|Alphaproteobacteria,3JVGB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF541)	omp28	GO:0005575,GO:0005623,GO:0042597,GO:0044464	-	ko:K09807	-	-	-	-	ko00000	-	-	-	SIMPL
SX1_k127_3623642_3	1297865.APJD01000019_gene3263	1.192e-238	737.0	COG2220@1|root,COG2220@2|Bacteria,1MV20@1224|Proteobacteria,2TRBC@28211|Alphaproteobacteria,3JSHY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Beta-lactamase superfamily domain	romA	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_2
SX1_k127_3623642_22	224911.27348729	2.631e-07	55.0	COG0541@1|root,COG0541@2|Bacteria,1MVIA@1224|Proteobacteria,2TQSW@28211|Alphaproteobacteria,3JR15@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components	ffh	-	3.6.5.4	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko01000,ko02044	3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9	-	-	SRP54,SRP54_N,SRP_SPB
SX1_k127_3623642_0	1230476.C207_04693	0.0	996.0	COG0541@1|root,COG0541@2|Bacteria,1MVIA@1224|Proteobacteria,2TQSW@28211|Alphaproteobacteria,3JR15@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components	ffh	-	3.6.5.4	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko01000,ko02044	3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9	-	-	SRP54,SRP54_N,SRP_SPB
SX1_k127_3623642_15	1297865.APJD01000019_gene3261	8.511e-63	216.0	COG0228@1|root,COG0228@2|Bacteria,1MZCT@1224|Proteobacteria,2U94X@28211|Alphaproteobacteria,3JYTG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the bacterial ribosomal protein bS16 family	rpsP	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02959	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	-	-	-	Ribosomal_S16
SX1_k127_3623642_10	1297865.APJD01000019_gene3260	1.437e-108	351.0	COG0806@1|root,COG0806@2|Bacteria,1MWQR@1224|Proteobacteria,2U9UT@28211|Alphaproteobacteria,3JT77@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes	rimM	-	-	ko:K02860	-	-	-	-	ko00000,ko03009	-	-	-	PRC,RimM
SX1_k127_3623642_4	1297865.APJD01000019_gene3259	1.131e-192	601.0	COG0583@1|root,COG0583@2|Bacteria,1MWY0@1224|Proteobacteria,2TSD9@28211|Alphaproteobacteria,3JQYD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	ko:K03566	ko02026,map02026	-	-	-	ko00000,ko00001,ko03000	-	-	-	HTH_1,LysR_substrate
SX1_k127_3623642_2	1297865.APJD01000019_gene3258	1.739e-244	757.0	COG0477@1|root,COG2814@2|Bacteria,1MVQ8@1224|Proteobacteria,2TV49@28211|Alphaproteobacteria,3JW3C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_3623642_6	1297865.APJD01000019_gene3257	4.955e-154	487.0	COG0336@1|root,COG0336@2|Bacteria,1MUN1@1224|Proteobacteria,2TSIZ@28211|Alphaproteobacteria,3JUNP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the RNA methyltransferase TrmD family	trmD	GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.1.1.228	ko:K00554	-	-	R00597	RC00003,RC00334	ko00000,ko01000,ko03016	-	-	-	tRNA_m1G_MT
SX1_k127_3623642_13	1298867.AUES01000040_gene958	2.753e-78	267.0	COG0335@1|root,COG0335@2|Bacteria,1RH3A@1224|Proteobacteria,2U9DF@28211|Alphaproteobacteria,3JYVU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site	rplS	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02884	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L19
SX1_k127_3623642_21	196490.AUEZ01000023_gene7190	2.497e-13	70.0	2AI49@1|root,318IB@2|Bacteria,1NP60@1224|Proteobacteria,2UJQ3@28211|Alphaproteobacteria,3K1T8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3623642_1	1297865.APJD01000019_gene3255	4.419e-315	966.0	COG0065@1|root,COG0065@2|Bacteria,1MVYR@1224|Proteobacteria,2TR6K@28211|Alphaproteobacteria,3JUMY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate	leuC	-	4.2.1.33,4.2.1.35	ko:K01703	ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230	M00432,M00535	R03896,R03898,R03968,R04001,R08620,R08624,R08628,R08634,R08641,R08645,R10170	RC00497,RC00976,RC00977,RC01041,RC01046,RC03072	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Aconitase
SX1_k127_3623642_18	1297865.APJD01000019_gene3254	5.864e-41	154.0	2CEKU@1|root,301C3@2|Bacteria,1N755@1224|Proteobacteria,2UHT2@28211|Alphaproteobacteria,3K0WC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3623642_9	1297865.APJD01000019_gene3253	2.381e-112	365.0	2F88F@1|root,340MM@2|Bacteria,1R8CW@1224|Proteobacteria,2TUYP@28211|Alphaproteobacteria,3JX4A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3623642_17	1297865.APJD01000019_gene3252	1.298e-57	201.0	COG5470@1|root,COG5470@2|Bacteria,1RK2E@1224|Proteobacteria,2UFEM@28211|Alphaproteobacteria,3JZXF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF1330)	MA20_43670	-	-	-	-	-	-	-	-	-	-	-	DUF1330
SX1_k127_3623642_14	1297865.APJD01000019_gene3251	6.735e-65	222.0	2AJSQ@1|root,31AF2@2|Bacteria,1NWBS@1224|Proteobacteria,2US53@28211|Alphaproteobacteria,3K456@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3623642_19	1297865.APJD01000019_gene3250	2.794e-38	147.0	2BR2X@1|root,312QF@2|Bacteria,1N47G@1224|Proteobacteria,2UE95@28211|Alphaproteobacteria,3K090@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3623642_20	1297865.APJD01000019_gene3249	3.952e-22	98.0	29W4H@1|root,30HPD@2|Bacteria,1P94F@1224|Proteobacteria,2UYWY@28211|Alphaproteobacteria,3K5CZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3623642_16	1297865.APJD01000019_gene3248	7.695e-61	217.0	29BSY@1|root,2ZYRA@2|Bacteria,1RKPZ@1224|Proteobacteria,2UA1S@28211|Alphaproteobacteria,3JZFM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3623642_12	1297865.APJD01000019_gene3247	1.595e-83	278.0	COG3824@1|root,COG3824@2|Bacteria,1N18M@1224|Proteobacteria,2UBUK@28211|Alphaproteobacteria,3JY7M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Zincin-like metallopeptidase	MA20_43655	-	2.7.2.8	ko:K00930	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	M00028	R02649	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	Zincin_1
SX1_k127_3623642_8	1297865.APJD01000019_gene3246	9.49e-132	421.0	COG0066@1|root,COG0066@2|Bacteria,1MVXB@1224|Proteobacteria,2TRRS@28211|Alphaproteobacteria,3JS0A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate	leuD	-	4.2.1.33,4.2.1.35	ko:K01704	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	M00432,M00535	R03896,R03898,R03968,R04001,R10170	RC00976,RC00977,RC01041,RC01046,RC03072	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Aconitase_C
SX1_k127_3623642_5	1297865.APJD01000019_gene3245	5.068e-177	554.0	COG3774@1|root,COG3774@2|Bacteria,1PWYJ@1224|Proteobacteria,2TQX7@28211|Alphaproteobacteria,3JU6S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	pathogenesis	MA20_43635	-	-	-	-	-	-	-	-	-	-	-	Gly_transf_sug
SX1_k127_362605_9	1297865.APJD01000008_gene5538	1.27e-41	159.0	COG2207@1|root,COG2207@2|Bacteria,1QKC9@1224|Proteobacteria,2U0K5@28211|Alphaproteobacteria,3K5XP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,HTH_18
SX1_k127_362605_2	1297865.APJD01000008_gene5539	0.0	1382.0	COG4774@1|root,COG4774@2|Bacteria,1MVZD@1224|Proteobacteria,2TS4K@28211|Alphaproteobacteria,3JR1J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	siderophore receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SX1_k127_362605_6	1297865.APJD01000008_gene5540	2.806e-255	788.0	COG0565@1|root,COG2852@1|root,COG0565@2|Bacteria,COG2852@2|Bacteria,1N47Y@1224|Proteobacteria,2TS8J@28211|Alphaproteobacteria,3JSPZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA	trmJ	-	-	ko:K02533	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	DUF559,SpoU_methylase
SX1_k127_362605_3	1297865.APJD01000008_gene5541	0.0	1124.0	COG1073@1|root,COG1073@2|Bacteria,1Q1YJ@1224|Proteobacteria,2V9IJ@28211|Alphaproteobacteria,3JWID@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_4
SX1_k127_362605_4	1297865.APJD01000008_gene5542	4.789e-271	835.0	COG0538@1|root,COG0538@2|Bacteria,1MUIB@1224|Proteobacteria,2TQWD@28211|Alphaproteobacteria,3JTHU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Belongs to the isocitrate and isopropylmalate dehydrogenases family	icd	-	1.1.1.42	ko:K00031	ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146	M00009,M00010,M00173,M00740	R00267,R00268,R01899	RC00001,RC00084,RC00114,RC00626,RC02801	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Iso_dh
SX1_k127_362605_7	1297865.APJD01000008_gene5543	2.211e-102	334.0	2DP2V@1|root,330AH@2|Bacteria,1R3EE@1224|Proteobacteria,2U69H@28211|Alphaproteobacteria,3JWEA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3455)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3455
SX1_k127_362605_0	1297865.APJD01000008_gene5544	0.0	1769.0	COG0013@1|root,COG0013@2|Bacteria,1MU9A@1224|Proteobacteria,2TQV4@28211|Alphaproteobacteria,3JS26@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain	alaS	GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.7	ko:K01872	ko00970,map00970	M00359,M00360	R03038	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	DHHA1,tRNA-synt_2c,tRNA_SAD
SX1_k127_362605_5	1297865.APJD01000008_gene5545	1.71e-256	793.0	COG0404@1|root,COG0404@2|Bacteria,1MV96@1224|Proteobacteria,2TRN4@28211|Alphaproteobacteria,3JRGH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	glycine cleavage system	gcvT	GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008483,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0016769,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0032991,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902494,GO:1990204	2.1.2.10	ko:K00605	ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200	M00532	R01221,R02300,R04125	RC00022,RC00069,RC00183,RC02834	ko00000,ko00001,ko00002,ko01000	-	-	-	GCV_T,GCV_T_C
SX1_k127_362605_8	1297865.APJD01000008_gene5546	3.296e-68	235.0	COG0509@1|root,COG0509@2|Bacteria,1RGV7@1224|Proteobacteria,2U9BY@28211|Alphaproteobacteria,3JYRT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein	gcvH	-	-	ko:K02437	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	M00532	R01221	RC00022,RC02834	ko00000,ko00001,ko00002	-	-	-	GCV_H
SX1_k127_362605_1	1297865.APJD01000008_gene5547	0.0	1739.0	COG0403@1|root,COG1003@1|root,COG0403@2|Bacteria,COG1003@2|Bacteria,1MUDP@1224|Proteobacteria,2TSFF@28211|Alphaproteobacteria,3JUAJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor	gcvP	-	1.4.4.2	ko:K00281,ko:K00283	ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200	M00532	R01221,R03425	RC00022,RC00929,RC02834,RC02880	ko00000,ko00001,ko00002,ko01000	-	-	-	Aminotran_5,GDC-P
SX1_k127_3631299_16	1230476.C207_04058	1.504e-96	319.0	COG0284@1|root,COG0284@2|Bacteria,1MW2C@1224|Proteobacteria,2TTB3@28211|Alphaproteobacteria,3JTIS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)	pyrF	GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	4.1.1.23	ko:K01591	ko00240,ko01100,map00240,map01100	M00051	R00965	RC00409	ko00000,ko00001,ko00002,ko01000	-	-	-	OMPdecase
SX1_k127_3631299_15	1297865.APJD01000028_gene5172	1.285e-116	376.0	COG0431@1|root,COG0431@2|Bacteria,1RH7F@1224|Proteobacteria,2TUD4@28211|Alphaproteobacteria,3JSDT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	NADPH-dependent FMN reductase	MA20_24580	-	-	-	-	-	-	-	-	-	-	-	FMN_red
SX1_k127_3631299_13	1230476.C207_04056	3.993e-126	404.0	COG3963@1|root,COG3963@2|Bacteria,1N1KB@1224|Proteobacteria,2TVD9@28211|Alphaproteobacteria,3JRWY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Ribosomal RNA adenine dimethylase	pmtA	-	2.1.1.17,2.1.1.71	ko:K00570	ko00564,ko01100,ko01110,map00564,map01100,map01110	M00091	R01320,R02056,R03424	RC00003,RC00060,RC00181,RC00496	ko00000,ko00001,ko00002,ko01000	-	-	-	Methyltransf_25,RrnaAD
SX1_k127_3631299_2	1297865.APJD01000028_gene5170	1.847e-246	761.0	COG0484@1|root,COG0484@2|Bacteria,1MVMS@1224|Proteobacteria,2TRZ1@28211|Alphaproteobacteria,3JS0I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins	dnaJ	-	-	ko:K03686	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	DnaJ,DnaJ_C,DnaJ_CXXCXGXG
SX1_k127_3631299_0	398525.KB900701_gene1531	0.0	1217.0	COG0443@1|root,COG0443@2|Bacteria,1MVEN@1224|Proteobacteria,2TR5H@28211|Alphaproteobacteria,3JQXK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Heat shock 70 kDa protein	dnaK	-	-	ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	1.A.33.1	-	-	HSP70
SX1_k127_3631299_8	1297865.APJD01000028_gene5168	3.048e-193	609.0	28JYF@1|root,2Z9NQ@2|Bacteria,1MXUQ@1224|Proteobacteria,2TS50@28211|Alphaproteobacteria,3JV8F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_24600	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3631299_11	398525.KB900701_gene1533	4.899e-139	461.0	COG1335@1|root,COG1335@2|Bacteria,1MUGW@1224|Proteobacteria,2TRMB@28211|Alphaproteobacteria,3JUUA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Isochorismatase family	pncA	-	3.5.1.19	ko:K08281	ko00760,ko01100,map00760,map01100	-	R01268	RC00100	ko00000,ko00001,ko01000	-	-	-	Isochorismatase
SX1_k127_3631299_9	1297865.APJD01000028_gene5166	1.505e-166	537.0	COG2207@1|root,COG2207@2|Bacteria,1R4RI@1224|Proteobacteria,2TUMD@28211|Alphaproteobacteria,3JW7S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
SX1_k127_3631299_17	1297865.APJD01000028_gene5165	8.795e-93	305.0	COG2764@1|root,COG2764@2|Bacteria,1RIZB@1224|Proteobacteria,2U9DC@28211|Alphaproteobacteria,3JYJC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
SX1_k127_3631299_14	1297865.APJD01000028_gene5164	4.533e-120	388.0	COG0576@1|root,COG0576@2|Bacteria,1RH8T@1224|Proteobacteria,2U5V2@28211|Alphaproteobacteria,3JT6A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ	grpE	GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363	-	ko:K03687	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	GrpE
SX1_k127_3631299_4	1297865.APJD01000028_gene5163	6.905e-224	695.0	COG1420@1|root,COG1420@2|Bacteria,1MVX4@1224|Proteobacteria,2TRUF@28211|Alphaproteobacteria,3JS5A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons	hrcA	-	-	ko:K03705	-	-	-	-	ko00000,ko03000	-	-	-	HrcA,HrcA_DNA-bdg
SX1_k127_3631299_10	172088.AUGA01000016_gene2530	1.465e-146	471.0	COG0689@1|root,COG0689@2|Bacteria,1MVFZ@1224|Proteobacteria,2TRMC@28211|Alphaproteobacteria,3JRP7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates	rph	GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575	2.7.7.56	ko:K00989	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	RNase_PH,RNase_PH_C
SX1_k127_3631299_12	1297865.APJD01000028_gene5161	6.532e-136	432.0	COG0127@1|root,COG0127@2|Bacteria,1MUK5@1224|Proteobacteria,2TV4B@28211|Alphaproteobacteria,3JTQ6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions	rdgB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576	3.6.1.66	ko:K02428	ko00230,map00230	-	R00426,R00720,R01855,R02100,R02720,R03531	RC00002	ko00000,ko00001,ko01000	-	-	-	Ham1p_like
SX1_k127_3631299_1	1297865.APJD01000028_gene5160	2.854e-247	764.0	COG0635@1|root,COG0635@2|Bacteria,1MU76@1224|Proteobacteria,2TT63@28211|Alphaproteobacteria,3JTNX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Involved in the biosynthesis of porphyrin-containing compound	hemN	-	-	-	-	-	-	-	-	-	-	-	HemN_C,Radical_SAM
SX1_k127_3631299_3	1297865.APJD01000028_gene5159	2.001e-231	721.0	COG0683@1|root,COG0683@2|Bacteria,1QURG@1224|Proteobacteria,2TS62@28211|Alphaproteobacteria,3JR0B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	LppC putative lipoprotein	MA20_24635	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_3631299_6	1297865.APJD01000028_gene5158	6.848e-200	623.0	COG0313@1|root,COG0313@2|Bacteria,1MU0E@1224|Proteobacteria,2TR14@28211|Alphaproteobacteria,3JTNR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA	rsmI	-	2.1.1.198	ko:K07056	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	TP_methylase
SX1_k127_3631299_18	172088.AUGA01000016_gene2525	4.493e-67	232.0	COG0792@1|root,COG0792@2|Bacteria,1N6VN@1224|Proteobacteria,2UFTM@28211|Alphaproteobacteria,3JZ0S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Belongs to the UPF0102 family	MA20_24645	-	-	ko:K07460	-	-	-	-	ko00000	-	-	-	UPF0102
SX1_k127_3631299_5	1297865.APJD01000028_gene5156	1.846e-206	642.0	COG0189@1|root,COG0189@2|Bacteria,1MVUA@1224|Proteobacteria,2TQNE@28211|Alphaproteobacteria,3JS1I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Belongs to the prokaryotic GSH synthase family	gshB	GO:0003674,GO:0003824,GO:0004363,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006518,GO:0006575,GO:0006749,GO:0006750,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0019184,GO:0034641,GO:0042398,GO:0043043,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044424,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901564,GO:1901566,GO:1901576	6.3.2.3	ko:K01920	ko00270,ko00480,ko01100,map00270,map00480,map01100	M00118	R00497,R10994	RC00096,RC00141	ko00000,ko00001,ko00002,ko01000	-	-	-	GSH-S_ATP,GSH-S_N
SX1_k127_3631299_7	1297865.APJD01000028_gene5155	3.576e-194	606.0	COG0491@1|root,COG0491@2|Bacteria,1MY6G@1224|Proteobacteria,2TTBX@28211|Alphaproteobacteria,3JTGB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metallo-beta-lactamase superfamily	MA20_30545	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
SX1_k127_3635046_1	1297865.APJD01000007_gene1751	3.538e-219	680.0	COG3313@1|root,COG3313@2|Bacteria,1N66E@1224|Proteobacteria,2U1CQ@28211|Alphaproteobacteria,3JW6K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Fe-S protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF1289
SX1_k127_3635046_3	1297865.APJD01000007_gene1752	4.608e-115	372.0	2ED6T@1|root,3373F@2|Bacteria,1MU1D@1224|Proteobacteria,2U2SX@28211|Alphaproteobacteria,3JSMS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3635046_0	1297865.APJD01000007_gene1753	0.0	1860.0	COG0209@1|root,COG0209@2|Bacteria,1MUJ8@1224|Proteobacteria,2TS19@28211|Alphaproteobacteria,3JTAV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides	nrdE	-	1.17.4.1	ko:K00525	ko00230,ko00240,ko01100,map00230,map00240,map01100	M00053	R02017,R02018,R02019,R02024	RC00613	ko00000,ko00001,ko00002,ko01000,ko03400	-	-	-	ATP-cone,RNR_N,Ribonuc_red_lgC,Ribonuc_red_lgN
SX1_k127_3635046_2	1297865.APJD01000007_gene1754	8.388e-128	408.0	COG0208@1|root,COG0208@2|Bacteria,1MWUS@1224|Proteobacteria,2TS3X@28211|Alphaproteobacteria,3JWYA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides	nrdB	-	1.17.4.1	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	M00053	R02017,R02018,R02019,R02024	RC00613	ko00000,ko00001,ko00002,ko01000,ko03400	-	-	-	Ribonuc_red_sm
SX1_k127_3635307_0	1297865.APJD01000005_gene3959	2.707e-309	946.0	COG4638@1|root,COG4638@2|Bacteria,1MX47@1224|Proteobacteria,2TV03@28211|Alphaproteobacteria,3JTQC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rieske [2Fe-2S] domain	-	-	-	-	-	-	-	-	-	-	-	-	Rieske
SX1_k127_3635307_4	1297865.APJD01000005_gene3960	4.068e-204	659.0	COG1018@1|root,COG1018@2|Bacteria,1MU6E@1224|Proteobacteria,2TRE9@28211|Alphaproteobacteria,3JSXZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	2Fe-2S iron-sulfur cluster binding domain	vanB	-	1.1.1.404	ko:K21607	ko00361,ko01100,ko01120,map00361,map01100,map01120	-	R11585	-	ko00000,ko00001,ko01000	-	-	-	FAD_binding_6,Fer2,NAD_binding_1
SX1_k127_3635307_2	1297865.APJD01000005_gene3961	9.756e-256	793.0	COG0683@1|root,COG0683@2|Bacteria,1R5JZ@1224|Proteobacteria,2TU8V@28211|Alphaproteobacteria,3JWFM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_3635307_1	1297865.APJD01000005_gene3962	7.573e-283	870.0	COG1804@1|root,COG1804@2|Bacteria,1MU2K@1224|Proteobacteria,2TR7Q@28211|Alphaproteobacteria,3JS9F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA-transferase family III	-	-	2.8.3.16	ko:K07749	-	-	-	-	ko00000,ko01000	-	-	-	CoA_transf_3
SX1_k127_3635307_3	1297865.APJD01000005_gene3963	3.327e-250	774.0	COG0183@1|root,COG0183@2|Bacteria,1MUZV@1224|Proteobacteria,2U3MA@28211|Alphaproteobacteria,3JWU0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	acetyl-coa acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3635307_5	1297865.APJD01000005_gene3964	2.412e-77	262.0	COG1545@1|root,COG1545@2|Bacteria,1REY1@1224|Proteobacteria,2U8AE@28211|Alphaproteobacteria,3JYU2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Rubredoxin-like zinc ribbon domain (DUF35_N)	-	-	-	-	-	-	-	-	-	-	-	-	DUF35_N,OB_aCoA_assoc
SX1_k127_3637193_3	1297865.APJD01000019_gene3336	3.897e-37	139.0	COG0583@1|root,COG0583@2|Bacteria,1MU7H@1224|Proteobacteria,2TS72@28211|Alphaproteobacteria,3JUZY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_3637193_2	1297865.APJD01000019_gene3335	7.14e-107	349.0	COG3832@1|root,COG3832@2|Bacteria,1REIB@1224|Proteobacteria,2U8IT@28211|Alphaproteobacteria,3JZ5Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
SX1_k127_3637193_1	1297865.APJD01000019_gene3334	1.805e-159	508.0	COG0500@1|root,COG2226@2|Bacteria,1R51W@1224|Proteobacteria,2U7CV@28211|Alphaproteobacteria,3K5UG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
SX1_k127_3637193_0	1297865.APJD01000019_gene3333	0.0	1213.0	COG4993@1|root,COG4993@2|Bacteria,1MUQX@1224|Proteobacteria,2TQMV@28211|Alphaproteobacteria,3JSPM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	PQQ-like domain	gcd	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	1.1.5.2	ko:K00117	ko00030,ko01100,ko01110,ko01130,map00030,map01100,map01110,map01130	-	R06620	RC00066	ko00000,ko00001,ko01000	-	-	-	PQQ,PQQ_2
SX1_k127_3641593_4	1297865.APJD01000005_gene3692	6.029e-131	418.0	COG0845@1|root,COG0845@2|Bacteria,1MVAS@1224|Proteobacteria,2TUDB@28211|Alphaproteobacteria,3JSKM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	MA20_15920	-	-	ko:K15727	-	-	-	-	ko00000,ko02000	8.A.1.2.1	-	-	HlyD_D23
SX1_k127_3641593_0	1297865.APJD01000005_gene3693	0.0	2001.0	COG3696@1|root,COG3696@2|Bacteria,1NUIV@1224|Proteobacteria,2TRWM@28211|Alphaproteobacteria,3JQRG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	MA20_15915	-	-	ko:K15726	-	-	-	-	ko00000,ko02000	2.A.6.1.2	-	-	ACR_tran
SX1_k127_3641593_3	113395.AXAI01000009_gene2526	9.022e-179	564.0	COG3618@1|root,COG3618@2|Bacteria,1N2QM@1224|Proteobacteria,2TTZK@28211|Alphaproteobacteria,3JSUM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Amidohydrolase	MA20_15910	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_2
SX1_k127_3641593_2	1297865.APJD01000005_gene3695	2.251e-277	857.0	COG1538@1|root,COG1538@2|Bacteria,1MWCJ@1224|Proteobacteria,2TR3S@28211|Alphaproteobacteria,3JQR2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	MU	Outer membrane efflux protein	tolC	-	-	ko:K12340	ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133	M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko02044	1.B.17,2.A.6.2	-	-	OEP
SX1_k127_3641593_1	1297865.APJD01000005_gene3696	3.282e-297	913.0	COG0427@1|root,COG0427@2|Bacteria,1MUGE@1224|Proteobacteria,2TZDG@28211|Alphaproteobacteria,3JQP8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Acetyl-CoA hydrolase/transferase C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	AcetylCoA_hyd_C
SX1_k127_3644090_6	1297865.APJD01000026_gene2593	1.385e-155	491.0	COG0042@1|root,COG0042@2|Bacteria,1MV5V@1224|Proteobacteria,2TRC8@28211|Alphaproteobacteria,3JSGQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines	dusB	-	-	ko:K05540	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Dus
SX1_k127_3644090_5	1297865.APJD01000026_gene2592	1.064e-247	767.0	COG3852@1|root,COG3852@2|Bacteria,1MVN6@1224|Proteobacteria,2TQS1@28211|Alphaproteobacteria,3JRY2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Signal transduction histidine kinase, nitrogen specific	ntrB	-	2.7.13.3	ko:K07708	ko02020,map02020	M00497	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA,PAS,PAS_4
SX1_k127_3644090_1	1297865.APJD01000026_gene2591	1.25e-311	955.0	COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,2TQPG@28211|Alphaproteobacteria,3JSFA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Sigma-54 interaction domain	ntrC	-	-	ko:K07712	ko02020,map02020	M00497	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	HTH_8,Response_reg,Sigma54_activ_2,Sigma54_activat
SX1_k127_3644090_0	1297865.APJD01000026_gene2590	0.0	1491.0	COG5000@1|root,COG5000@2|Bacteria,1MWKZ@1224|Proteobacteria,2TQTB@28211|Alphaproteobacteria,3JT86@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain	ntrY	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	2.7.13.3	ko:K13598	ko02020,map02020	M00498	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HAMP,HATPase_c,HisKA,PAS,PAS_4
SX1_k127_3644090_2	1297865.APJD01000026_gene2589	1.91e-289	889.0	COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,2TQW2@28211|Alphaproteobacteria,3JT3A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Sigma-54 interaction domain	ntrX	-	-	ko:K13599	ko02020,map02020	M00498	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	HTH_8,Response_reg,Sigma54_activat
SX1_k127_3644090_7	1230476.C207_01028	9.219e-49	174.0	COG1923@1|root,COG1923@2|Bacteria,1MZM1@1224|Proteobacteria,2UBTW@28211|Alphaproteobacteria,3JZC3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs	hfq	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0006807,GO:0008150,GO:0008152,GO:0009399,GO:0071941,GO:0097159,GO:1901363	-	ko:K03666	ko02024,ko03018,ko05111,map02024,map03018,map05111	-	-	-	ko00000,ko00001,ko03019,ko03036	-	-	-	Hfq
SX1_k127_3644090_3	1230476.C207_01029	3.284e-288	886.0	COG2262@1|root,COG2262@2|Bacteria,1MUA0@1224|Proteobacteria,2TUXJ@28211|Alphaproteobacteria,3JVWE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis	hflX	GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003924,GO:0005488,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006417,GO:0006464,GO:0006468,GO:0006518,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006996,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016310,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018105,GO:0018193,GO:0018209,GO:0019001,GO:0019222,GO:0019538,GO:0019843,GO:0022411,GO:0030554,GO:0031323,GO:0031326,GO:0032268,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0032790,GO:0032984,GO:0032988,GO:0034248,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0036211,GO:0036289,GO:0043021,GO:0043022,GO:0043023,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0071826,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008,GO:2000112	-	ko:K03665	-	-	-	-	ko00000,ko03009	-	-	-	GTP-bdg_M,GTP-bdg_N,MMR_HSR1
SX1_k127_3644090_4	1230476.C207_01030	9.404e-254	783.0	COG0665@1|root,COG0665@2|Bacteria,1Q9VR@1224|Proteobacteria,2U05R@28211|Alphaproteobacteria,3K2RD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	FAD dependent oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	DAO
SX1_k127_3656847_1	1297865.APJD01000007_gene2114	0.0	1992.0	COG1014@1|root,COG4231@1|root,COG1014@2|Bacteria,COG4231@2|Bacteria,1MUKS@1224|Proteobacteria,2TSHH@28211|Alphaproteobacteria,3JSRZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Pyruvate ferredoxin/flavodoxin oxidoreductase	MA20_17555	-	1.2.7.8	ko:K04090	-	-	-	-	br01601,ko00000,ko01000	-	-	-	POR,TPP_enzyme_C
SX1_k127_3656847_3	1297865.APJD01000007_gene2113	4.972e-213	661.0	28HWH@1|root,2Z82E@2|Bacteria,1MUF7@1224|Proteobacteria,2TV8Z@28211|Alphaproteobacteria,3JV6A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3656847_8	1297865.APJD01000007_gene2112	4.948e-115	372.0	COG2128@1|root,COG2128@2|Bacteria,1PNA5@1224|Proteobacteria,2U0KT@28211|Alphaproteobacteria,3JSXF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Carboxymuconolactone decarboxylase family	-	-	-	-	-	-	-	-	-	-	-	-	CMD
SX1_k127_3656847_4	1297865.APJD01000007_gene2111	2.535e-165	520.0	COG1028@1|root,COG1028@2|Bacteria,1MUFX@1224|Proteobacteria,2TRWN@28211|Alphaproteobacteria,3JSZZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	MA20_17615	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_3656847_10	1230476.C207_02986	3.569e-36	138.0	2AB11@1|root,310EM@2|Bacteria,1MZE3@1224|Proteobacteria,2UD0U@28211|Alphaproteobacteria,3K0EX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3656847_0	1297865.APJD01000007_gene2109	0.0	2016.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JRP3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Efflux pump membrane transporter	MA20_26850	-	-	ko:K18299,ko:K18902,ko:K19594	-	M00641,M00698,M00768,M00769	-	-	ko00000,ko00002,ko01504,ko02000	2.A.6.2,2.A.6.2.16,2.A.6.2.25,2.A.6.2.34	-	-	ACR_tran
SX1_k127_3656847_2	1230476.C207_02988	4.317e-250	773.0	COG0845@1|root,COG0845@2|Bacteria,1MU78@1224|Proteobacteria,2TSWK@28211|Alphaproteobacteria,3JSYN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	mexE	-	-	ko:K18901	-	M00698	-	-	ko00000,ko00002,ko01504,ko02000	2.A.6.2,8.A.1	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
SX1_k127_3656847_6	1230476.C207_02989	4.466e-118	380.0	COG1309@1|root,COG1309@2|Bacteria,1NCEF@1224|Proteobacteria,2TR7K@28211|Alphaproteobacteria,3JSCU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	tetR family	MA20_26860	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_3656847_5	1297865.APJD01000007_gene2106	1.098e-132	423.0	COG3576@1|root,COG3576@2|Bacteria,1MWG9@1224|Proteobacteria,2TSKK@28211|Alphaproteobacteria,3JRJT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Pyridoxamine 5'-phosphate oxidase	MA20_21430	-	-	ko:K07006	-	-	-	-	ko00000	-	-	-	Putative_PNPOx
SX1_k127_3656847_7	1297865.APJD01000007_gene2105	4.111e-116	379.0	COG3709@1|root,COG3709@2|Bacteria,1RGXZ@1224|Proteobacteria,2UC24@28211|Alphaproteobacteria,3JUG6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)	phnN	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006015,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019200,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019693,GO:0033863,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046391,GO:0046483,GO:0046496,GO:0046835,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.7.4.23	ko:K05774	ko00030,map00030	-	R06836	RC00002	ko00000,ko00001,ko01000	-	-	-	AAA_18,AAA_33,Guanylate_kin
SX1_k127_3656847_9	1297865.APJD01000007_gene2104	9.655e-38	141.0	COG3454@1|root,COG3454@2|Bacteria,1MV7H@1224|Proteobacteria,2TQMS@28211|Alphaproteobacteria,3JTGF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Amidohydrolase family	phnM	-	3.6.1.63	ko:K06162	ko00440,map00440	-	R10186	RC00002	ko00000,ko00001,ko01000	-	-	-	Amidohydro_1,Amidohydro_3
SX1_k127_3660650_6	1297865.APJD01000010_gene4901	3.012e-34	132.0	COG3439@1|root,COG3439@2|Bacteria,1MZ38@1224|Proteobacteria,2UBVK@28211|Alphaproteobacteria,3JYK0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function DUF302	ccrB	-	-	-	-	-	-	-	-	-	-	-	DUF302
SX1_k127_3660650_2	1297865.APJD01000010_gene4902	1.343e-145	463.0	COG2214@1|root,COG2214@2|Bacteria,1PUS9@1224|Proteobacteria,2TT35@28211|Alphaproteobacteria,3JS49@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	DnaJ molecular chaperone homology domain	MA20_36100	-	-	-	-	-	-	-	-	-	-	-	DnaJ
SX1_k127_3660650_1	1297865.APJD01000010_gene4903	0.0	1085.0	COG1686@1|root,COG1686@2|Bacteria,1MUU7@1224|Proteobacteria,2TRCV@28211|Alphaproteobacteria,3JT9T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the peptidase S11 family	dacA1	-	3.4.16.4	ko:K01286,ko:K07258	ko00550,ko01100,map00550,map01100	-	-	-	ko00000,ko00001,ko01000,ko01002,ko01011	-	-	-	Peptidase_S11,SPOR
SX1_k127_3660650_5	1230476.C207_04141	4.459e-65	223.0	COG5490@1|root,COG5490@2|Bacteria,1MZW0@1224|Proteobacteria,2UC4T@28211|Alphaproteobacteria,3JYPF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Phasin protein	MA20_36110	-	-	-	-	-	-	-	-	-	-	-	Phasin_2
SX1_k127_3660650_0	1297865.APJD01000010_gene4905	0.0	1222.0	COG4961@1|root,COG4961@2|Bacteria,1MWXU@1224|Proteobacteria,2TRQP@28211|Alphaproteobacteria,3JSKJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Putative Flp pilus-assembly TadE/G-like	-	-	-	-	-	-	-	-	-	-	-	-	Tad,VWA
SX1_k127_3660650_4	1297865.APJD01000010_gene4906	1.352e-70	245.0	COG2127@1|root,COG2127@2|Bacteria,1MZU8@1224|Proteobacteria,2U982@28211|Alphaproteobacteria,3JYQ3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation	clpS	-	-	ko:K06891	-	-	-	-	ko00000	-	-	-	ClpS
SX1_k127_3660650_3	1230476.C207_04144	1.351e-139	444.0	COG0542@1|root,COG0542@2|Bacteria,1MV8B@1224|Proteobacteria,2TQUZ@28211|Alphaproteobacteria,3JQUP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Belongs to the ClpA ClpB family	clpA	GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043335,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564	-	ko:K03694	-	-	-	-	ko00000,ko03110	-	-	-	AAA,AAA_2,ClpB_D2-small,Clp_N
SX1_k127_3687622_0	1297865.APJD01000006_gene4399	0.0	2034.0	COG0366@1|root,COG3281@1|root,COG0366@2|Bacteria,COG3281@2|Bacteria,1MVKX@1224|Proteobacteria,2TRS3@28211|Alphaproteobacteria,3JT1J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Maltogenic Amylase, C-terminal domain	treS	-	3.2.1.1,5.4.99.16	ko:K05343	ko00500,ko01100,map00500,map01100	-	R01557,R02108,R02112,R11262	RC01816	ko00000,ko00001,ko01000	-	GH13	-	APH,Alpha-amylase,Malt_amylase_C
SX1_k127_3687622_1	1297865.APJD01000006_gene4398	0.0	1305.0	COG0296@1|root,COG0296@2|Bacteria,1QTVN@1224|Proteobacteria,2TR5K@28211|Alphaproteobacteria,3JUN5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position	glgB	-	2.4.1.18	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	M00565	R02110	-	ko00000,ko00001,ko00002,ko01000,ko04147	-	CBM48,GH13	-	Alpha-amylase,Alpha-amylase_C,CBM_48
SX1_k127_3688177_2	1297865.APJD01000001_gene5958	1.11e-166	525.0	COG2377@1|root,COG2377@2|Bacteria,1MV4E@1224|Proteobacteria,2TS4G@28211|Alphaproteobacteria,3JSYI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling	anmK	-	2.7.1.170	ko:K09001	-	-	-	-	ko00000,ko01000	-	-	-	AnmK
SX1_k127_3688177_1	1297865.APJD01000001_gene5959	4.261e-270	832.0	COG0162@1|root,COG0162@2|Bacteria,1MVUQ@1224|Proteobacteria,2TQPA@28211|Alphaproteobacteria,3JRMZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)	tyrS	GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564	6.1.1.1	ko:K01866	ko00970,map00970	M00359,M00360	R02918	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	S4,tRNA-synt_1b
SX1_k127_3688177_0	1297865.APJD01000001_gene5960	2.942e-271	840.0	COG0477@1|root,COG2814@2|Bacteria,1P4XF@1224|Proteobacteria,2U185@28211|Alphaproteobacteria,3JT15@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_3694891_3	1297865.APJD01000005_gene3948	2.087e-224	698.0	COG1228@1|root,COG1228@2|Bacteria,1MUYR@1224|Proteobacteria,2TSA1@28211|Alphaproteobacteria,3JVJX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	imidazolonepropionase activity	hutI	-	3.5.2.7	ko:K01468	ko00340,ko01100,map00340,map01100	M00045	R02288	RC00683	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1,Amidohydro_3
SX1_k127_3694891_1	1297865.APJD01000005_gene3949	3.6e-317	990.0	COG2986@1|root,COG2986@2|Bacteria,1MU6K@1224|Proteobacteria,2TSPJ@28211|Alphaproteobacteria,3JRHS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	histidine ammonia-lyase activity	hutH	-	4.3.1.3	ko:K01745	ko00340,ko01100,map00340,map01100	M00045	R01168	RC00361	ko00000,ko00001,ko00002,ko01000	-	-	-	Lyase_aromatic
SX1_k127_3694891_0	1297865.APJD01000005_gene3950	0.0	1147.0	COG2987@1|root,COG2987@2|Bacteria,1MU4W@1224|Proteobacteria,2TSJR@28211|Alphaproteobacteria,3JRYI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate	hutU	-	4.2.1.49	ko:K01712	ko00340,ko01100,map00340,map01100	M00045	R02914	RC00804	ko00000,ko00001,ko00002,ko01000	-	-	-	Urocanase,Urocanase_C,Urocanase_N
SX1_k127_3694891_2	1297865.APJD01000005_gene3951	3.756e-262	810.0	COG0683@1|root,COG0683@2|Bacteria,1R4YP@1224|Proteobacteria,2U1BZ@28211|Alphaproteobacteria,3JSVX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_3694891_4	1297865.APJD01000005_gene3952	1.304e-120	387.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TQKE@28211|Alphaproteobacteria,3JRFI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_3702712_6	1297865.APJD01000007_gene2098	1.237e-42	156.0	COG3624@1|root,COG3624@2|Bacteria,1MZTZ@1224|Proteobacteria,2UD64@28211|Alphaproteobacteria,3JY3S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Phosphonate metabolism protein PhnG	phnG	GO:0005575,GO:0006793,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0019634,GO:0019637,GO:0019700,GO:0032991,GO:0044237,GO:0046434,GO:0061694,GO:0061695,GO:0071704,GO:1901575,GO:1902494,GO:1904176,GO:1990234	2.7.8.37	ko:K06166	ko00440,map00440	-	R10185	RC00005,RC00063	ko00000,ko00001,ko01000	-	-	-	PhnG
SX1_k127_3702712_5	1297865.APJD01000007_gene2099	2.607e-118	383.0	COG3625@1|root,COG3625@2|Bacteria,1RHXN@1224|Proteobacteria,2U9PC@28211|Alphaproteobacteria,3JVKA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Bacterial phosphonate metabolism protein (PhnH)	phnH	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0006793,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0019634,GO:0019637,GO:0019700,GO:0032991,GO:0042802,GO:0044237,GO:0046434,GO:0061694,GO:0061695,GO:0071704,GO:1901575,GO:1902494,GO:1904176,GO:1990234	2.7.8.37	ko:K06165	ko00440,map00440	-	R10185	RC00005,RC00063	ko00000,ko00001,ko01000	-	-	-	PhnH
SX1_k127_3702712_0	1297865.APJD01000007_gene2100	1.184e-236	732.0	COG3626@1|root,COG3626@2|Bacteria,1MUBA@1224|Proteobacteria,2TR4C@28211|Alphaproteobacteria,3JRU6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Bacterial phosphonate metabolism protein (PhnI)	phnI	GO:0003674,GO:0003824,GO:0005575,GO:0006793,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0019634,GO:0019637,GO:0019700,GO:0032991,GO:0044237,GO:0046434,GO:0061693,GO:0061694,GO:0061695,GO:0071704,GO:1901575,GO:1902494,GO:1904176,GO:1990234	2.7.8.37	ko:K06164	ko00440,map00440	-	R10185	RC00005,RC00063	ko00000,ko00001,ko01000	-	-	-	PhnI
SX1_k127_3702712_1	1297865.APJD01000007_gene2101	2.133e-195	612.0	COG3627@1|root,COG3627@2|Bacteria,1MV7T@1224|Proteobacteria,2TRKP@28211|Alphaproteobacteria,3JUSW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Catalyzes the breakage of the C-P bond in alpha-D-ribose 1-methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose	phnJ	GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0006793,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016829,GO:0018835,GO:0019634,GO:0019637,GO:0019700,GO:0032991,GO:0044237,GO:0046434,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:0098848,GO:1901575,GO:1902494,GO:1904176	4.7.1.1	ko:K06163	ko00440,map00440	-	R10204	RC03078,RC03079	ko00000,ko00001,ko01000	-	-	-	PhnJ
SX1_k127_3702712_3	1038859.AXAU01000024_gene3974	2.421e-150	483.0	COG4107@1|root,COG4107@2|Bacteria,1MVRN@1224|Proteobacteria,2TQXF@28211|Alphaproteobacteria,3JU21@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ATPases associated with a variety of cellular activities	phnK	GO:0005575,GO:0006793,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0019634,GO:0019637,GO:0019700,GO:0032991,GO:0044237,GO:0046434,GO:0071704,GO:1901575,GO:1902494,GO:1904176	-	ko:K05781	-	-	-	-	ko00000	-	-	-	ABC_tran
SX1_k127_3702712_4	1297865.APJD01000007_gene2103	1.408e-140	451.0	COG4778@1|root,COG4778@2|Bacteria,1MUPB@1224|Proteobacteria,2TR7T@28211|Alphaproteobacteria,3JU3B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ATPases associated with a variety of cellular activities	phnL	GO:0005575,GO:0006793,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0019634,GO:0019637,GO:0019700,GO:0032991,GO:0044237,GO:0046434,GO:0061694,GO:0061695,GO:0071704,GO:1901575,GO:1902494,GO:1990234	2.7.8.37	ko:K05780	ko00440,map00440	-	R10185	RC00005,RC00063	ko00000,ko00001,ko01000	-	-	-	ABC_tran
SX1_k127_3702712_2	1297865.APJD01000007_gene2104	5.803e-192	600.0	COG3454@1|root,COG3454@2|Bacteria,1MV7H@1224|Proteobacteria,2TQMS@28211|Alphaproteobacteria,3JTGF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Amidohydrolase family	phnM	-	3.6.1.63	ko:K06162	ko00440,map00440	-	R10186	RC00002	ko00000,ko00001,ko01000	-	-	-	Amidohydro_1,Amidohydro_3
SX1_k127_3710922_6	1297865.APJD01000001_gene6005	6.658e-105	341.0	COG0657@1|root,COG0657@2|Bacteria,1NEXK@1224|Proteobacteria,2U5X1@28211|Alphaproteobacteria,3JSH0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Carboxylesterase family	-	-	-	ko:K01066	-	-	-	-	ko00000,ko01000	-	-	-	Abhydrolase_3
SX1_k127_3710922_4	1297865.APJD01000001_gene6004	1.239e-150	491.0	COG1028@1|root,COG1028@2|Bacteria,1MUFX@1224|Proteobacteria,2TVKK@28211|Alphaproteobacteria,3JSD2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_3710922_3	1297865.APJD01000001_gene6003	2.989e-199	623.0	COG4765@1|root,COG4765@2|Bacteria,1RHI7@1224|Proteobacteria,2UBR9@28211|Alphaproteobacteria,3JR7X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized protein conserved in bacteria (DUF2155)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2155
SX1_k127_3710922_5	1297865.APJD01000001_gene6002	6.975e-146	463.0	COG2360@1|root,COG2360@2|Bacteria,1R9W8@1224|Proteobacteria,2U59K@28211|Alphaproteobacteria,3JUI9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine	aat	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008914,GO:0016740,GO:0016746,GO:0016755,GO:0044424,GO:0044464,GO:0140096	2.3.2.6	ko:K00684	-	-	R03813,R11443,R11444	RC00055,RC00064	ko00000,ko01000	-	-	-	Leu_Phe_trans
SX1_k127_3710922_1	1297865.APJD01000001_gene6001	3.084e-302	929.0	COG0471@1|root,COG0471@2|Bacteria,1MUSA@1224|Proteobacteria,2TU0C@28211|Alphaproteobacteria,3JRI4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Sodium:sulfate symporter transmembrane region	-	-	-	ko:K03319,ko:K09477,ko:K11106,ko:K14445	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.47,2.A.47.1,2.A.47.3.2,2.A.47.3.3	-	-	Na_sulph_symp
SX1_k127_3710922_2	1297865.APJD01000001_gene6000	6.228e-257	796.0	COG0845@1|root,COG0845@2|Bacteria,1MW65@1224|Proteobacteria,2TSB6@28211|Alphaproteobacteria,3JWP5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Biotin-lipoyl like	-	-	-	ko:K07799,ko:K18990	ko02020,map02020	M00648,M00720	-	-	ko00000,ko00001,ko00002,ko02000	2.A.6.2.30,8.A.1	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
SX1_k127_3710922_0	1297865.APJD01000001_gene5999	0.0	1947.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JSVA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K07788	ko02020,map02020	M00648	-	-	ko00000,ko00001,ko00002,ko02000	2.A.6.2	-	-	ACR_tran
SX1_k127_3710922_7	1297865.APJD01000001_gene5998	1.121e-68	233.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JRBW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	AcrB/AcrD/AcrF family	-	-	-	ko:K07789	ko02020,map02020	M00648	-	-	ko00000,ko00001,ko00002,ko02000	2.A.6.2	-	-	ACR_tran
SX1_k127_3710926_1	1297865.APJD01000020_gene23	3.177e-260	802.0	COG0188@1|root,COG0188@2|Bacteria,1MURI@1224|Proteobacteria,2TQRQ@28211|Alphaproteobacteria,3JWK5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule	parC	-	-	ko:K02621	-	-	-	-	ko00000,ko01000,ko02048,ko03032,ko03036	-	-	-	DNA_gyraseA_C,DNA_topoisoIV
SX1_k127_3710926_3	1297865.APJD01000020_gene24	8.658e-207	646.0	COG1230@1|root,COG1230@2|Bacteria,1MVQB@1224|Proteobacteria,2TR65@28211|Alphaproteobacteria,3JTI5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	cation efflux	czcD	-	-	ko:K16264	-	-	-	-	ko00000,ko02000	2.A.4.1	-	-	Cation_efflux
SX1_k127_3710926_5	1297865.APJD01000020_gene25	3.979e-170	544.0	COG1396@1|root,COG1396@2|Bacteria,1MWUC@1224|Proteobacteria,2TU04@28211|Alphaproteobacteria,3K692@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Helix-turn-helix XRE-family like proteins	-	-	-	-	-	-	-	-	-	-	-	-	HTH_3,HTH_31
SX1_k127_3710926_4	1297865.APJD01000020_gene26	2.058e-174	548.0	COG0697@1|root,COG0697@2|Bacteria,1PB22@1224|Proteobacteria,2U158@28211|Alphaproteobacteria,3JUX7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	MA20_36650	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_3710926_7	1297865.APJD01000020_gene27	8.743e-34	133.0	2AEZR@1|root,314XU@2|Bacteria,1NBYQ@1224|Proteobacteria,2UG51@28211|Alphaproteobacteria,3K16K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3710926_0	1297865.APJD01000020_gene28	5.692e-276	852.0	COG2114@1|root,COG2114@2|Bacteria,1QTFI@1224|Proteobacteria,2TRNP@28211|Alphaproteobacteria,3JSE5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylyl- / guanylyl cyclase, catalytic domain	MA20_36665	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
SX1_k127_3710926_2	1297865.APJD01000020_gene29	1.377e-243	758.0	COG0477@1|root,COG2814@2|Bacteria,1R3YS@1224|Proteobacteria,2TT98@28211|Alphaproteobacteria,3JRGC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Transmembrane secretion effector	MA20_36670	-	-	-	-	-	-	-	-	-	-	-	MFS_1,MFS_3
SX1_k127_3710926_6	1297865.APJD01000020_gene30	5.783e-102	333.0	COG2268@1|root,COG2268@2|Bacteria,1P50K@1224|Proteobacteria,2TTVY@28211|Alphaproteobacteria,3JTXC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Flotillin	MA20_29840	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944	-	ko:K07192	ko04910,map04910	-	-	-	ko00000,ko00001,ko03036,ko04131,ko04147	-	-	-	Band_7,Flot
SX1_k127_3712077_0	667632.KB890176_gene4611	2.334e-144	460.0	COG0056@1|root,COG0056@2|Bacteria,1MUG7@1224|Proteobacteria,2VHQU@28216|Betaproteobacteria,1K1JD@119060|Burkholderiaceae	28216|Betaproteobacteria	F	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit	atpA	-	3.6.3.14	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko01000	3.A.2.1	-	-	ATP-synt_ab,ATP-synt_ab_C,ATP-synt_ab_N
SX1_k127_3712077_2	381666.H16_A3640	2.03e-43	165.0	COG0712@1|root,COG0712@2|Bacteria,1MVRH@1224|Proteobacteria,2VSJV@28216|Betaproteobacteria,1K3DY@119060|Burkholderiaceae	28216|Betaproteobacteria	C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation	atpH	-	-	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	OSCP
SX1_k127_3712077_1	1288494.EBAPG3_29130	2.026e-47	176.0	COG0711@1|root,COG0711@2|Bacteria,1RHZ0@1224|Proteobacteria,2VRMS@28216|Betaproteobacteria,372ZX@32003|Nitrosomonadales	28216|Betaproteobacteria	C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation	atpF	-	-	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt_B
SX1_k127_3712077_3	323848.Nmul_A0305	1.675e-30	121.0	COG0636@1|root,32S3K@2|Bacteria,1N1NA@1224|Proteobacteria,2VTY0@28216|Betaproteobacteria,373AG@32003|Nitrosomonadales	28216|Betaproteobacteria	C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation	atpE	-	-	ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt_C
SX1_k127_37276_2	1297865.APJD01000028_gene5213	4.89e-95	312.0	COG1934@1|root,COG1934@2|Bacteria,1MXGA@1224|Proteobacteria,2U6DD@28211|Alphaproteobacteria,3JTRX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	OstA-like protein	lptA	-	-	ko:K09774	-	-	-	-	ko00000,ko02000	1.B.42.1	-	-	OstA
SX1_k127_37276_1	1297865.APJD01000028_gene5214	1.496e-206	643.0	COG1137@1|root,COG1137@2|Bacteria,1MU8M@1224|Proteobacteria,2TR7F@28211|Alphaproteobacteria,3JSM6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	ABC transporter	lptB	-	-	ko:K06861	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	1.B.42.1	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_37276_0	1297865.APJD01000028_gene5215	0.0	1065.0	COG1508@1|root,COG1508@2|Bacteria,1MW4V@1224|Proteobacteria,2TS41@28211|Alphaproteobacteria,3JRJQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	rpoN	-	-	ko:K03092	ko02020,ko05111,map02020,map05111	-	-	-	ko00000,ko00001,ko03021	-	-	-	Sigma54_AID,Sigma54_CBD,Sigma54_DBD
SX1_k127_37276_3	1297865.APJD01000028_gene5216	8.774e-77	259.0	COG1544@1|root,COG1544@2|Bacteria,1MZHW@1224|Proteobacteria,2TV3J@28211|Alphaproteobacteria,3JRKU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase	hpf	GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:1990904,GO:2000112,GO:2000113	-	ko:K05808	-	-	-	-	ko00000,ko03009	-	-	-	Ribosom_S30AE_C,Ribosomal_S30AE
SX1_k127_3731708_8	1297865.APJD01000003_gene6165	9.978e-139	442.0	COG0477@1|root,COG2814@2|Bacteria,1N7AK@1224|Proteobacteria,2TUVF@28211|Alphaproteobacteria,3JTAK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	MA20_22795	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_3731708_1	1297865.APJD01000003_gene6164	1.696e-262	812.0	COG0477@1|root,COG2814@2|Bacteria,1MW59@1224|Proteobacteria,2TRA3@28211|Alphaproteobacteria,3JT8D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	MA20_22800	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
SX1_k127_3731708_9	1297865.APJD01000003_gene6163	5.955e-105	341.0	COG1598@1|root,COG1598@2|Bacteria,1RIRX@1224|Proteobacteria,2U92H@28211|Alphaproteobacteria,3JZB1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	HicB_like antitoxin of bacterial toxin-antitoxin system	-	-	-	-	-	-	-	-	-	-	-	-	HicB_lk_antitox
SX1_k127_3731708_3	1297865.APJD01000003_gene6162	1.137e-194	607.0	COG2518@1|root,COG2518@2|Bacteria,1RAIE@1224|Proteobacteria,2U6D7@28211|Alphaproteobacteria,3JUZU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)	pcm1	-	2.1.1.77	ko:K00573	-	-	-	-	ko00000,ko01000	-	-	-	PCMT
SX1_k127_3731708_7	1297865.APJD01000003_gene6161	2.768e-153	484.0	COG2813@1|root,COG2813@2|Bacteria,1RHAE@1224|Proteobacteria,2U5V5@28211|Alphaproteobacteria,3JU02@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Protein of unknown function (DUF938)	-	-	-	-	-	-	-	-	-	-	-	-	DUF938
SX1_k127_3731708_14	1297865.APJD01000003_gene6160	1.638e-66	229.0	COG2010@1|root,COG2010@2|Bacteria,1N91W@1224|Proteobacteria,2U7G5@28211|Alphaproteobacteria,3JZ64@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome C oxidase, cbb3-type, subunit III	-	-	-	ko:K17223	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	-	-	-	Cytochrom_C,Cytochrome_CBB3
SX1_k127_3731708_12	1297865.APJD01000003_gene6159	8.189e-87	288.0	COG5501@1|root,COG5501@2|Bacteria,1RH4J@1224|Proteobacteria,2TUH8@28211|Alphaproteobacteria,3JRF4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sulfur oxidation protein SoxY	MA20_22820	-	-	ko:K17226	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	-	-	-	SoxY
SX1_k127_3731708_15	1297865.APJD01000003_gene6158	1.601e-62	215.0	COG5501@1|root,COG5501@2|Bacteria,1N097@1224|Proteobacteria,2U9JC@28211|Alphaproteobacteria,3JZE0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sulphur oxidation protein SoxZ	MA20_22825	-	-	ko:K17227	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	-	-	-	SoxZ
SX1_k127_3731708_4	1297865.APJD01000003_gene6157	8.947e-191	598.0	COG3258@1|root,COG3258@2|Bacteria,1MXB0@1224|Proteobacteria,2TTDW@28211|Alphaproteobacteria,3JVCB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Thiosulfate-oxidizing multienzyme system protein SoxA	MA20_22830	-	-	ko:K17222	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	-	-	-	-
SX1_k127_3731708_16	1297865.APJD01000003_gene6156	1.018e-51	188.0	28QR0@1|root,2ZD6F@2|Bacteria,1RIBT@1224|Proteobacteria,2UA2N@28211|Alphaproteobacteria,3JZF0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_22835	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3731708_0	1297865.APJD01000003_gene6155	0.0	1191.0	COG0737@1|root,COG0737@2|Bacteria,1MX03@1224|Proteobacteria,2TUAE@28211|Alphaproteobacteria,3JWMX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Belongs to the 5'-nucleotidase family	MA20_22840	-	-	ko:K17224	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	-	-	-	5_nucleotid_C,Metallophos
SX1_k127_3731708_11	1297865.APJD01000003_gene6154	1.323e-87	295.0	COG1416@1|root,COG1416@2|Bacteria,1RBQX@1224|Proteobacteria,2U6BV@28211|Alphaproteobacteria,3JY5C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	ko:K09004	-	-	-	-	ko00000	-	-	-	DrsE
SX1_k127_3731708_10	1297865.APJD01000003_gene6153	4.46e-90	297.0	COG1416@1|root,COG1416@2|Bacteria,1RE8C@1224|Proteobacteria,2U80W@28211|Alphaproteobacteria,3K5T7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	DsrE/DsrF-like family	-	-	-	ko:K09004	-	-	-	-	ko00000	-	-	-	DrsE
SX1_k127_3731708_2	1297865.APJD01000003_gene6152	3.313e-227	704.0	COG0491@1|root,COG0607@1|root,COG0491@2|Bacteria,COG0607@2|Bacteria,1MURA@1224|Proteobacteria,2TR1F@28211|Alphaproteobacteria,3JUUY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rhodanese Homology Domain	MA20_22850	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B,Rhodanese
SX1_k127_3731708_5	1297865.APJD01000003_gene6151	1.148e-172	544.0	COG0614@1|root,COG0614@2|Bacteria,1RAUP@1224|Proteobacteria,2TUB0@28211|Alphaproteobacteria,3JT3Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	PFAM periplasmic binding protein	-	-	-	ko:K02016	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	Peripla_BP_2
SX1_k127_3731708_6	1297865.APJD01000003_gene6150	1.45e-155	499.0	COG1120@1|root,COG1120@2|Bacteria,1QPWJ@1224|Proteobacteria,2U1TK@28211|Alphaproteobacteria,3JUXQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	HP	ABC transporter	-	-	3.6.3.34	ko:K02013	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.14	-	-	ABC_tran
SX1_k127_3731708_13	1297865.APJD01000003_gene6149	9.889e-77	258.0	COG0609@1|root,COG0609@2|Bacteria,1MV9W@1224|Proteobacteria,2TR9A@28211|Alphaproteobacteria,3JWF5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	-	-	-	ko:K02015	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	FecCD
SX1_k127_3737097_1	1297865.APJD01000010_gene4858	4.984e-266	820.0	COG0726@1|root,COG0726@2|Bacteria,1PJQG@1224|Proteobacteria,2TR9X@28211|Alphaproteobacteria,3JRGE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
SX1_k127_3737097_2	1297865.APJD01000010_gene4859	4.751e-177	555.0	COG0726@1|root,COG0726@2|Bacteria,1PJQG@1224|Proteobacteria,2TTI8@28211|Alphaproteobacteria,3JU1Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
SX1_k127_3737097_0	1297865.APJD01000010_gene4860	3.906e-285	892.0	COG2239@1|root,COG2239@2|Bacteria,1MW24@1224|Proteobacteria,2TRWK@28211|Alphaproteobacteria,3JSGK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Acts as a magnesium transporter	mgtE	-	-	ko:K06213	-	-	-	-	ko00000,ko02000	1.A.26.1	-	-	CBS,MgtE,MgtE_N
SX1_k127_3737097_3	1297865.APJD01000010_gene4861	2.084e-58	204.0	COG2944@1|root,COG2944@2|Bacteria,1MZGM@1224|Proteobacteria,2UB31@28211|Alphaproteobacteria,3K0GP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	transcriptional regulator, XRE family	-	-	-	ko:K07726	-	-	-	-	ko00000,ko03000	-	-	-	HTH_3,HTH_31
SX1_k127_3749444_4	319003.Bra1253DRAFT_08150	1.535e-29	117.0	COG0784@1|root,COG0784@2|Bacteria,1QU3I@1224|Proteobacteria,2TVXW@28211|Alphaproteobacteria,3JY06@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Response regulator receiver domain	divK	-	-	ko:K11443	ko02020,ko04112,map02020,map04112	M00511	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg
SX1_k127_3749444_1	1297865.APJD01000010_gene4930	2.357e-292	898.0	COG0745@1|root,COG2199@1|root,COG0745@2|Bacteria,COG3706@2|Bacteria,1R7HC@1224|Proteobacteria,2TQQM@28211|Alphaproteobacteria,3JRN7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Response regulator receiver	pleD	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0042802,GO:0044424,GO:0044464	2.7.7.65	ko:K02488	ko02020,ko04112,map02020,map04112	M00511	R08057	-	ko00000,ko00001,ko00002,ko01000,ko02022	-	-	-	GGDEF,Response_reg
SX1_k127_3749444_3	1297865.APJD01000010_gene4931	2.17e-164	519.0	COG1414@1|root,COG1414@2|Bacteria,1QRZN@1224|Proteobacteria,2UDNG@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	IclR helix-turn-helix domain	-	-	-	ko:K05818	-	-	-	-	ko00000,ko03000	-	-	-	HTH_IclR,IclR
SX1_k127_3749444_0	1297865.APJD01000010_gene4932	3.653e-314	963.0	COG3119@1|root,COG3119@2|Bacteria,1MUJH@1224|Proteobacteria,2TSB8@28211|Alphaproteobacteria,3JXU5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Sulfatase	-	-	-	-	-	-	-	-	-	-	-	-	Sulfatase
SX1_k127_3749444_2	1297865.APJD01000010_gene4933	1.086e-267	825.0	COG1680@1|root,COG1680@2|Bacteria,1MVPR@1224|Proteobacteria,2U2BY@28211|Alphaproteobacteria,3JVAK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase	MA20_27795	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SX1_k127_3757059_1	1297865.APJD01000005_gene3553	1.416e-189	593.0	COG3396@1|root,COG3396@2|Bacteria,1MVQ7@1224|Proteobacteria,2TTC4@28211|Alphaproteobacteria,3JTGS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Phenylacetic acid catabolic protein	paaA	-	1.14.13.149	ko:K02609	ko00360,ko01120,map00360,map01120	-	R09838	RC02690	ko00000,ko00001,ko01000	-	-	-	PaaA_PaaC
SX1_k127_3757059_5	1297865.APJD01000005_gene3554	2.31e-58	202.0	COG3460@1|root,COG3460@2|Bacteria,1RHM5@1224|Proteobacteria,2U9HF@28211|Alphaproteobacteria,3JZFH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	phenylacetic acid degradation	paaB	-	-	ko:K02610	ko00360,ko01120,map00360,map01120	-	R09838	RC02690	ko00000,ko00001	-	-	-	PaaB
SX1_k127_3757059_2	1297865.APJD01000005_gene3555	5.032e-170	533.0	COG3396@1|root,COG3396@2|Bacteria,1MVYQ@1224|Proteobacteria,2TRYF@28211|Alphaproteobacteria,3JUK9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Phenylacetic acid catabolic protein	paaC	-	1.14.13.149	ko:K02611	ko00360,ko01120,map00360,map01120	-	R09838	RC02690	ko00000,ko00001,ko01000	-	-	-	PaaA_PaaC
SX1_k127_3757059_3	113395.AXAI01000009_gene2374	1.147e-86	293.0	COG2151@1|root,COG2151@2|Bacteria,1RF3S@1224|Proteobacteria,2TRQW@28211|Alphaproteobacteria,3JSNZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Iron-sulfur cluster assembly protein	paaD	-	-	ko:K02612	ko00360,ko01120,map00360,map01120	-	R09838	RC02690	ko00000,ko00001	-	-	-	FeS_assembly_P
SX1_k127_3757059_0	1297865.APJD01000005_gene3557	1.856e-238	737.0	COG1018@1|root,COG1018@2|Bacteria,1MY2Q@1224|Proteobacteria,2U0WY@28211|Alphaproteobacteria,3JTD7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Oxidoreductase FAD-binding domain	paaE	-	-	ko:K02613	ko00360,ko01120,map00360,map01120	-	R09838	RC02690	ko00000,ko00001	-	-	-	FAD_binding_6,Fer2,NAD_binding_1
SX1_k127_3757059_4	1230476.C207_02409	1.762e-61	213.0	COG2050@1|root,COG2050@2|Bacteria,1RH35@1224|Proteobacteria,2U5QW@28211|Alphaproteobacteria,3JV3S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Thioesterase superfamily	paaI	-	-	ko:K02614	ko00360,map00360	-	R09840	RC00004,RC00014	ko00000,ko00001,ko01000	-	-	-	4HBT
SX1_k127_3764838_12	1297865.APJD01000033_gene6947	3.326e-27	111.0	COG3237@1|root,COG3237@2|Bacteria,1NGW6@1224|Proteobacteria,2UI12@28211|Alphaproteobacteria,3K1GT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	CsbD-like	-	-	-	-	-	-	-	-	-	-	-	-	CsbD
SX1_k127_3764838_8	1297865.APJD01000033_gene6948	7.414e-72	243.0	COG3237@1|root,COG3237@2|Bacteria,1PV2N@1224|Proteobacteria,2V6JA@28211|Alphaproteobacteria,3K25B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	CsbD-like	-	-	-	-	-	-	-	-	-	-	-	-	CsbD
SX1_k127_3764838_5	1297865.APJD01000033_gene6949	5.492e-158	504.0	COG1196@1|root,COG1196@2|Bacteria,1RCVH@1224|Proteobacteria,2TZG8@28211|Alphaproteobacteria,3K5VM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	nuclear chromosome segregation	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3764838_11	1297865.APJD01000033_gene6950	9.743e-50	179.0	COG2261@1|root,COG2261@2|Bacteria,1N72W@1224|Proteobacteria,2UBU4@28211|Alphaproteobacteria,3K05G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Transglycosylase associated protein	-	-	-	-	-	-	-	-	-	-	-	-	Transgly_assoc
SX1_k127_3764838_0	1297865.APJD01000033_gene6951	0.0	1971.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JUZB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Efflux pump membrane transporter	-	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
SX1_k127_3764838_3	1230476.C207_03838	2.511e-232	722.0	COG0845@1|root,COG0845@2|Bacteria,1MU78@1224|Proteobacteria,2TT21@28211|Alphaproteobacteria,3JTRE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K03585	ko01501,ko01503,map01501,map01503	M00646,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	2.A.6.2,8.A.1.6	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
SX1_k127_3764838_4	1297865.APJD01000033_gene6953	3.932e-217	687.0	COG2130@1|root,COG2130@2|Bacteria,1QT41@1224|Proteobacteria,2U0JC@28211|Alphaproteobacteria,3K2EP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	N-terminal domain of oxidoreductase	-	-	-	ko:K07119	-	-	-	-	ko00000	-	-	-	ADH_N_2,ADH_zinc_N
SX1_k127_3764838_6	1297865.APJD01000033_gene6954	6.973e-109	372.0	COG1309@1|root,COG1309@2|Bacteria,1R8KS@1224|Proteobacteria,2TSYV@28211|Alphaproteobacteria,3JURE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_3764838_2	1297865.APJD01000033_gene6955	1.693e-246	766.0	COG1073@1|root,COG1073@2|Bacteria,1R4ZT@1224|Proteobacteria,2U56V@28211|Alphaproteobacteria,3JVW8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	alpha beta	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3764838_1	1297865.APJD01000033_gene6956	1.346e-256	792.0	2BRUM@1|root,32KUU@2|Bacteria,1R4S2@1224|Proteobacteria,2TUH1@28211|Alphaproteobacteria,3JWAI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative beta-barrel porin 2	-	-	-	-	-	-	-	-	-	-	-	-	BBP2_2
SX1_k127_3764838_7	1297865.APJD01000033_gene6958	9.735e-78	261.0	COG3070@1|root,COG3070@2|Bacteria,1N8X8@1224|Proteobacteria,2V15N@28211|Alphaproteobacteria,3JZVB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	TfoX N-terminal domain	-	-	-	ko:K07343	-	-	-	-	ko00000	-	-	-	TfoX_N
SX1_k127_3764838_9	1297865.APJD01000033_gene6959	1.538e-65	231.0	COG2771@1|root,COG2771@2|Bacteria,1R5JB@1224|Proteobacteria,2U1CA@28211|Alphaproteobacteria,3JUIY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE
SX1_k127_3765833_1	1297865.APJD01000039_gene1742	4.662e-313	966.0	COG2989@1|root,COG2989@2|Bacteria,1MV14@1224|Proteobacteria,2TRJ9@28211|Alphaproteobacteria,3JR7I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative peptidoglycan binding domain	-	-	-	ko:K21470	-	-	-	-	ko00000,ko01002,ko01011	-	-	-	PG_binding_1,YkuD
SX1_k127_3765833_2	1230476.C207_04430	6.853e-307	942.0	COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,2TQPG@28211|Alphaproteobacteria,3JR1C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Sigma-54 interaction domain	tacA	GO:0003674,GO:0003700,GO:0004857,GO:0006355,GO:0008073,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010967,GO:0019219,GO:0019222,GO:0030234,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0033238,GO:0042979,GO:0043086,GO:0044092,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0065009,GO:0080090,GO:0098772,GO:0140110,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	HTH_8,Response_reg,Sigma54_activ_2,Sigma54_activat
SX1_k127_3765833_0	1297865.APJD01000039_gene1744	0.0	1285.0	COG1164@1|root,COG1164@2|Bacteria,1MXAC@1224|Proteobacteria,2TRPY@28211|Alphaproteobacteria,3JUD8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Oligopeptidase F	pepF	-	-	ko:K08602	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M3,Peptidase_M3_N
SX1_k127_3765833_3	172088.AUGA01000032_gene1460	1.074e-20	91.0	2EHA1@1|root,33B1X@2|Bacteria,1N6XW@1224|Proteobacteria,2UF37@28211|Alphaproteobacteria,3K10Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	cytochrome c oxidase subunit IV	MA20_03820	-	-	-	-	-	-	-	-	-	-	-	COX4_pro_2
SX1_k127_3766970_3	1297865.APJD01000011_gene6707	3.514e-34	131.0	COG2197@1|root,COG2197@2|Bacteria,1QAMX@1224|Proteobacteria,2VF1K@28211|Alphaproteobacteria,3JVCR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE
SX1_k127_3766970_1	1297865.APJD01000011_gene6706	3.073e-171	538.0	COG1011@1|root,COG1011@2|Bacteria,1MU1H@1224|Proteobacteria,2U2PC@28211|Alphaproteobacteria,3JWUM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Haloacid dehalogenase-like hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	HAD_2
SX1_k127_3766970_0	1297865.APJD01000011_gene6705	6.335e-264	814.0	COG2124@1|root,COG2124@2|Bacteria,1N0ID@1224|Proteobacteria,2TT7V@28211|Alphaproteobacteria,3JQMQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Cytochrome P450	MA20_11175	-	-	ko:K21034	-	-	-	-	ko00000,ko00199	-	-	-	p450
SX1_k127_3766970_2	1297865.APJD01000011_gene6704	1.025e-68	235.0	2AAT7@1|root,3105S@2|Bacteria,1MYYY@1224|Proteobacteria,2UAHT@28211|Alphaproteobacteria,3JZVZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF5132)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5132
SX1_k127_3770323_1	1297865.APJD01000052_gene1191	2.03e-131	422.0	COG0559@1|root,COG0559@2|Bacteria,1QDNH@1224|Proteobacteria,2U1CJ@28211|Alphaproteobacteria,3JRUY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	-	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_3770323_0	1297865.APJD01000052_gene1192	3.712e-236	731.0	COG0683@1|root,COG0683@2|Bacteria,1NNXR@1224|Proteobacteria,2VEZD@28211|Alphaproteobacteria,3K6E7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_3772040_2	1297865.APJD01000010_gene4915	5.138e-205	638.0	2DBSD@1|root,2ZARI@2|Bacteria,1MX0F@1224|Proteobacteria,2TUNC@28211|Alphaproteobacteria,3JQX7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Glycine/sarcosine/betaine reductase selenoprotein B (GRDB)	MA20_42050	-	-	-	-	-	-	-	-	-	-	-	GRDB
SX1_k127_3772040_1	1297865.APJD01000010_gene4916	4.615e-209	656.0	COG0741@1|root,COG0741@2|Bacteria,1MZ4X@1224|Proteobacteria,2TUX7@28211|Alphaproteobacteria,3JR9N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Sporulation related domain	MA20_36170	-	-	-	-	-	-	-	-	-	-	-	SLT,SPOR
SX1_k127_3772040_5	1297865.APJD01000010_gene4917	1.126e-150	478.0	COG1296@1|root,COG1296@2|Bacteria,1QFIN@1224|Proteobacteria,2U0SX@28211|Alphaproteobacteria,3JSAN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	AzlC protein	MA20_36175	-	-	-	-	-	-	-	-	-	-	-	AzlC
SX1_k127_3772040_9	1297865.APJD01000010_gene4918	1.11e-64	232.0	2E5FD@1|root,33072@2|Bacteria,1N14X@1224|Proteobacteria,2UCC5@28211|Alphaproteobacteria,3JZFE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Branched-chain amino acid transport protein (AzlD)	MA20_36180	-	-	-	-	-	-	-	-	-	-	-	AzlD
SX1_k127_3772040_3	1230476.C207_04156	1.531e-199	624.0	COG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2TQWK@28211|Alphaproteobacteria,3JV1H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter family receptor	-	-	-	-	-	-	-	-	-	-	-	-	TctC
SX1_k127_3772040_6	1230476.C207_04157	1.876e-104	339.0	COG1720@1|root,COG1720@2|Bacteria,1MUF0@1224|Proteobacteria,2TVD8@28211|Alphaproteobacteria,3JSIZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterised protein family UPF0066	virR	-	-	-	-	-	-	-	-	-	-	-	UPF0066
SX1_k127_3772040_8	1297865.APJD01000010_gene4921	4.41e-84	287.0	COG0537@1|root,COG0537@2|Bacteria,1RDCJ@1224|Proteobacteria,2U956@28211|Alphaproteobacteria,3JY6T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	FG	Scavenger mRNA decapping enzyme C-term binding	MA20_36190	-	-	ko:K02503	-	-	-	-	ko00000,ko04147	-	-	-	HIT
SX1_k127_3772040_0	1297865.APJD01000010_gene4922	1.594e-280	865.0	COG3146@1|root,COG3146@2|Bacteria,1MU35@1224|Proteobacteria,2TS5I@28211|Alphaproteobacteria,3JRHQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Peptidogalycan biosysnthesis/recognition	MA20_36195	-	-	ko:K09919	-	-	-	-	ko00000	-	-	-	FemAB_like
SX1_k127_3772040_4	1297865.APJD01000010_gene4923	5.667e-162	510.0	COG0584@1|root,COG0584@2|Bacteria,1MU8H@1224|Proteobacteria,2TV1D@28211|Alphaproteobacteria,3JR0Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	glycerophosphoryl diester phosphodiesterase	ugpQ	-	3.1.4.46	ko:K01126	ko00564,map00564	-	R01030,R01470	RC00017,RC00425	ko00000,ko00001,ko01000	-	-	-	GDPD
SX1_k127_3772040_7	1297865.APJD01000010_gene4924	7.35e-90	301.0	COG0251@1|root,COG0251@2|Bacteria,1RHMZ@1224|Proteobacteria,2U9H4@28211|Alphaproteobacteria,3JY5J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	endoribonuclease L-PSP	MA20_36205	-	-	-	-	-	-	-	-	-	-	-	YjgF_endoribonc
SX1_k127_3786003_1	1297865.APJD01000023_gene1053	6.024e-133	423.0	COG3777@1|root,COG3777@2|Bacteria,1P96N@1224|Proteobacteria,2TV0U@28211|Alphaproteobacteria,3JQXP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	N-terminal half of MaoC dehydratase	MA20_04520	-	4.2.1.153	ko:K09709	ko00720,ko01120,ko01200,map00720,map01120,map01200	M00376	R09282	RC02479	ko00000,ko00001,ko00002,ko01000	-	-	-	MaoC_dehydrat_N,MaoC_dehydratas
SX1_k127_3786003_2	1297865.APJD01000023_gene1054	9.423e-78	261.0	2BZQA@1|root,32WE5@2|Bacteria,1N533@1224|Proteobacteria,2UD0J@28211|Alphaproteobacteria,3K0KR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of Unknown Function (DUF930)	-	-	-	-	-	-	-	-	-	-	-	-	DUF930
SX1_k127_3786003_4	1297865.APJD01000023_gene1055	9.972e-51	180.0	COG5591@1|root,COG5591@2|Bacteria,1N9QU@1224|Proteobacteria,2UHZK@28211|Alphaproteobacteria,3K27N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Peptidase propeptide and YPEB domain	-	-	-	-	-	-	-	-	-	-	-	-	PepSY_2
SX1_k127_3786003_0	1297865.APJD01000023_gene1056	9.28e-226	706.0	COG0079@1|root,COG0079@2|Bacteria,1MW7I@1224|Proteobacteria,2TT3X@28211|Alphaproteobacteria,3JS7G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily	hisC	-	2.6.1.9	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	M00026	R00694,R00734,R03243	RC00006,RC00888	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
SX1_k127_3786003_3	1297865.APJD01000023_gene1057	2.121e-53	189.0	COG1359@1|root,COG1359@2|Bacteria,1NGPW@1224|Proteobacteria,2U9DJ@28211|Alphaproteobacteria,3JZJY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Antibiotic biosynthesis monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	ABM
SX1_k127_3786680_4	1297865.APJD01000007_gene1818	4.807e-48	172.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,3JXVZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde dehydrogenase family	-	-	-	-	-	-	-	-	-	-	-	-	Aldedh
SX1_k127_3786680_3	1449353.JQMQ01000005_gene3365	4.325e-50	183.0	COG3193@1|root,COG3193@2|Bacteria,2IG7N@201174|Actinobacteria	201174|Actinobacteria	S	Haem-degrading	-	-	-	-	-	-	-	-	-	-	-	-	Haem_degrading
SX1_k127_3786680_0	1297865.APJD01000007_gene1816	0.0	1081.0	COG0654@1|root,COG0654@2|Bacteria,1MX9R@1224|Proteobacteria,2TR4U@28211|Alphaproteobacteria,3JSWT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	1.14.13.127	ko:K05712,ko:K20218	ko00360,ko00623,ko01120,ko01220,map00360,map00623,map01120,map01220	M00545	R06786,R06787,R11197,R11198	RC00236,RC00389	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_3
SX1_k127_3786680_2	1297865.APJD01000007_gene1815	2.112e-229	709.0	COG0346@1|root,COG0346@2|Bacteria,1MUWY@1224|Proteobacteria,2TTMJ@28211|Alphaproteobacteria,3JUBI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	1.13.11.2	ko:K00446	ko00361,ko00362,ko00622,ko00643,ko01100,ko01120,ko01220,map00361,map00362,map00622,map00643,map01100,map01120,map01220	M00569	R00816,R04089,R05295,R05404,R05406,R07795	RC00387,RC00643,RC01075,RC01364,RC01914	br01602,ko00000,ko00001,ko00002,ko01000	-	-	-	Glyoxalase
SX1_k127_3786680_1	1297865.APJD01000007_gene1814	0.0	1062.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,3JSAE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Putative diguanylate phosphodiesterase	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,HAMP,MHYT,PAS_7,dCache_1,dCache_3
SX1_k127_3793997_3	1297865.APJD01000012_gene1322	6.315e-141	458.0	COG0410@1|root,COG0410@2|Bacteria,1MUR3@1224|Proteobacteria,2TSWQ@28211|Alphaproteobacteria,3JRHZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ABC transporter	-	-	-	ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran
SX1_k127_3793997_0	1297865.APJD01000012_gene1323	0.0	1201.0	COG0411@1|root,COG4177@1|root,COG0411@2|Bacteria,COG4177@2|Bacteria,1MUTY@1224|Proteobacteria,2TQVU@28211|Alphaproteobacteria,3JRTU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the binding-protein-dependent transport system permease family	-	-	-	ko:K01995,ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C,BPD_transp_2
SX1_k127_3793997_2	1297865.APJD01000012_gene1324	2.711e-176	554.0	COG0559@1|root,COG0559@2|Bacteria,1MY1E@1224|Proteobacteria,2TSIQ@28211|Alphaproteobacteria,3JR6D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	-	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_3793997_1	1297865.APJD01000012_gene1325	3.744e-301	925.0	COG0683@1|root,COG0683@2|Bacteria,1MUCB@1224|Proteobacteria,2TRWV@28211|Alphaproteobacteria,3JVAV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein domain	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_3793997_4	1297865.APJD01000012_gene1326	4.104e-14	72.0	2A5XE@1|root,30UPF@2|Bacteria,1R4CE@1224|Proteobacteria,2TVMT@28211|Alphaproteobacteria,3JWZ7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3797897_7	1297865.APJD01000014_gene993	1.582e-06	49.0	COG4700@1|root,COG4700@2|Bacteria,1R577@1224|Proteobacteria,2TU7Z@28211|Alphaproteobacteria,3JW2W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	PLDc_N,TPR_16,TPR_19,TPR_4
SX1_k127_3797897_0	1297865.APJD01000014_gene994	1.21e-189	594.0	COG3181@1|root,COG3181@2|Bacteria,1MW18@1224|Proteobacteria,2TSKY@28211|Alphaproteobacteria,3JT19@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter family receptor	MA20_09060	-	-	-	-	-	-	-	-	-	-	-	TctC
SX1_k127_3797897_2	1297865.APJD01000014_gene995	2.231e-152	483.0	COG0047@1|root,COG0047@2|Bacteria,1MU4Y@1224|Proteobacteria,2TS67@28211|Alphaproteobacteria,3JT4P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL	purQ	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	6.3.5.3	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04463	RC00010,RC01160	ko00000,ko00001,ko00002,ko01000	-	-	-	GATase_5
SX1_k127_3797897_3	1297865.APJD01000014_gene996	1.258e-99	332.0	2A9RW@1|root,30YZF@2|Bacteria,1RJRU@1224|Proteobacteria,2UACF@28211|Alphaproteobacteria,3K006@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3797897_6	1230476.C207_00675	4.639e-39	146.0	COG1828@1|root,COG1828@2|Bacteria,1N83G@1224|Proteobacteria,2UF7S@28211|Alphaproteobacteria,3K02S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL	purS	-	6.3.5.3	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04463	RC00010,RC01160	ko00000,ko00001,ko00002,ko01000	-	-	-	PurS
SX1_k127_3797897_1	1230476.C207_00676	3.312e-172	545.0	COG0152@1|root,COG0152@2|Bacteria,1MUR9@1224|Proteobacteria,2TR8D@28211|Alphaproteobacteria,3JQM7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	phosphoribosylaminoimidazole-succinocarboxamide synthase	purC	-	6.3.2.6	ko:K01923	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04591	RC00064,RC00162	ko00000,ko00001,ko00002,ko01000	-	-	-	SAICAR_synt
SX1_k127_3797897_4	1297865.APJD01000014_gene999	1.253e-57	203.0	COG5467@1|root,COG5467@2|Bacteria,1MZRN@1224|Proteobacteria,2UC1G@28211|Alphaproteobacteria,3JZI5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF1476)	MA20_09035	-	-	-	-	-	-	-	-	-	-	-	DUF1476
SX1_k127_3797897_5	1297865.APJD01000014_gene1000	1.585e-53	188.0	2ADXD@1|root,313PI@2|Bacteria,1N563@1224|Proteobacteria,2UBQ7@28211|Alphaproteobacteria,3K0C7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3810127_3	1297865.APJD01000012_gene1385	4.844e-42	154.0	29Z4V@1|root,30M2J@2|Bacteria,1MZ41@1224|Proteobacteria,2UDYY@28211|Alphaproteobacteria,3K04K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3810127_1	1297865.APJD01000012_gene1384	2.59e-103	339.0	COG1309@1|root,COG1309@2|Bacteria,1Q4KH@1224|Proteobacteria,2U3WX@28211|Alphaproteobacteria,3JRHY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	WHG domain	MA20_10330	-	-	-	-	-	-	-	-	-	-	-	TetR_N,WHG
SX1_k127_3810127_2	398525.KB900701_gene1166	1.784e-74	251.0	2BTAW@1|root,32NGH@2|Bacteria,1RD0M@1224|Proteobacteria,2U7KV@28211|Alphaproteobacteria,3JYU0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3810127_0	1297865.APJD01000012_gene1382	1.282e-231	715.0	COG2141@1|root,COG2141@2|Bacteria,1MX64@1224|Proteobacteria,2TT8C@28211|Alphaproteobacteria,3JSF0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Luciferase-like monooxygenase	MA20_04750	-	1.14.13.162	ko:K21731	-	-	-	-	ko00000,ko01000	-	-	-	Bac_luciferase
SX1_k127_3817456_9	1297865.APJD01000001_gene5962	7.421e-48	171.0	COG1225@1|root,COG1225@2|Bacteria,1RD4R@1224|Proteobacteria,2U6Z9@28211|Alphaproteobacteria,3JTEU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Redoxin	bcp	-	1.11.1.15	ko:K03564	-	-	-	-	ko00000,ko01000	-	-	-	AhpC-TSA
SX1_k127_3817456_2	1230476.C207_01343	1.251e-278	859.0	COG0739@1|root,COG0739@2|Bacteria,1MVTF@1224|Proteobacteria,2TQZE@28211|Alphaproteobacteria,3JRKV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Peptidase family M23	MA20_30780	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
SX1_k127_3817456_5	1297865.APJD01000001_gene5964	2.031e-239	743.0	28PH1@1|root,2ZC7N@2|Bacteria,1RAFS@1224|Proteobacteria,2TQW7@28211|Alphaproteobacteria,3JSPU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3817456_6	1297865.APJD01000001_gene5965	1.101e-183	575.0	COG5281@1|root,COG5281@2|Bacteria,1NZ1M@1224|Proteobacteria,2TS08@28211|Alphaproteobacteria,3JUB7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	sister chromatid segregation	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3817456_8	1297865.APJD01000001_gene5966	1.413e-87	289.0	2A851@1|root,30X5T@2|Bacteria,1RFM4@1224|Proteobacteria,2U6ZY@28211|Alphaproteobacteria,3JYSI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3817456_10	1297865.APJD01000001_gene5967	2.926e-28	124.0	29MWW@1|root,308UN@2|Bacteria,1NPV5@1224|Proteobacteria,2UMM0@28211|Alphaproteobacteria,3K20M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3817456_0	1297865.APJD01000001_gene5968	0.0	1279.0	COG0438@1|root,COG1682@1|root,COG0438@2|Bacteria,COG1682@2|Bacteria,1MVB4@1224|Proteobacteria,2TSSB@28211|Alphaproteobacteria,3JT7U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Glycosyl transferases group 1	-	-	2.4.1.348	ko:K12995	-	-	-	-	ko00000,ko01000,ko01003,ko01005	-	GT4	-	ABC2_membrane,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
SX1_k127_3817456_7	1297865.APJD01000001_gene5969	2.722e-153	484.0	COG1134@1|root,COG1134@2|Bacteria,1MWWC@1224|Proteobacteria,2TU3M@28211|Alphaproteobacteria,3JQWF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	GM	ABC transporter	-	-	-	ko:K09691	ko02010,map02010	M00250	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.103	-	-	ABC_tran,Wzt_C
SX1_k127_3817456_1	1297865.APJD01000001_gene5970	4.292e-297	941.0	COG0438@1|root,COG0438@2|Bacteria,1R402@1224|Proteobacteria,2VF3P@28211|Alphaproteobacteria,3JU30@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1
SX1_k127_3817456_3	1297865.APJD01000001_gene5971	6.659e-274	843.0	COG3307@1|root,COG3307@2|Bacteria,1R495@1224|Proteobacteria,2TQUQ@28211|Alphaproteobacteria,3JTQD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	O-Antigen ligase	-	-	-	-	-	-	-	-	-	-	-	-	Wzy_C
SX1_k127_3817456_4	1297865.APJD01000001_gene5972	6.612e-260	800.0	COG0683@1|root,COG0683@2|Bacteria,1MV1Z@1224|Proteobacteria,2TU6Q@28211|Alphaproteobacteria,3JUQS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_3822168_9	398525.KB900701_gene5700	5.398e-52	184.0	COG2847@1|root,COG2847@2|Bacteria,1RK52@1224|Proteobacteria,2UA1C@28211|Alphaproteobacteria,3JZCA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Copper chaperone PCu(A)C	-	-	-	-	-	-	-	-	-	-	-	-	PCuAC
SX1_k127_3822168_0	1297865.APJD01000002_gene4037	0.0	1237.0	COG4993@1|root,COG4993@2|Bacteria,1MUQX@1224|Proteobacteria,2TS2Q@28211|Alphaproteobacteria,3JWDX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	PQQ-like domain	-	-	-	-	-	-	-	-	-	-	-	-	PQQ,PQQ_2
SX1_k127_3822168_8	1297865.APJD01000002_gene4038	1.075e-117	383.0	COG2010@1|root,COG2010@2|Bacteria,1R7BD@1224|Proteobacteria,2U52C@28211|Alphaproteobacteria,3JX9B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,Cytochrome_CBB3
SX1_k127_3822168_7	1297865.APJD01000002_gene4039	2.596e-132	426.0	2EC85@1|root,3366N@2|Bacteria,1PMHT@1224|Proteobacteria,2U2BS@28211|Alphaproteobacteria,3JX4E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3822168_6	1297865.APJD01000002_gene4040	4.678e-194	619.0	COG1414@1|root,COG1414@2|Bacteria,1RFSY@1224|Proteobacteria,2U3M4@28211|Alphaproteobacteria,3JZH2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	IclR helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_IclR,IclR
SX1_k127_3822168_1	1297865.APJD01000002_gene4041	0.0	1180.0	COG1960@1|root,COG1960@2|Bacteria,1MU20@1224|Proteobacteria,2TQU2@28211|Alphaproteobacteria,3JS7A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, middle domain	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M
SX1_k127_3822168_5	1297865.APJD01000002_gene4042	6.804e-256	793.0	COG0683@1|root,COG0683@2|Bacteria,1MUCB@1224|Proteobacteria,2TRWV@28211|Alphaproteobacteria,3JUNA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein domain	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_3822168_2	1297865.APJD01000002_gene4043	0.0	1127.0	COG0515@1|root,COG0631@1|root,COG0515@2|Bacteria,COG0631@2|Bacteria,1MV1P@1224|Proteobacteria,2TQTS@28211|Alphaproteobacteria,3JWJC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KLT	Serine/threonine phosphatases, family 2C, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	PP2C_2,Pkinase
SX1_k127_3822168_3	1297865.APJD01000002_gene4044	7.034e-271	836.0	COG2223@1|root,COG2223@2|Bacteria,1MU27@1224|Proteobacteria,2TSXZ@28211|Alphaproteobacteria,3JUV6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Major Facilitator Superfamily	narK	-	-	ko:K02575	ko00910,map00910	M00615	-	-	ko00000,ko00001,ko00002,ko02000	2.A.1.8	-	-	MFS_1
SX1_k127_3822168_4	1297865.APJD01000002_gene4045	1.024e-263	814.0	COG1251@1|root,COG1251@2|Bacteria,1MW58@1224|Proteobacteria,2TS8I@28211|Alphaproteobacteria,3JRH5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Pyridine nucleotide-disulphide oxidoreductase	nirB	-	1.2.1.58,1.7.1.15	ko:K00362,ko:K18359	ko00360,ko00910,ko01120,map00360,map00910,map01120	M00530	R00787,R02450	RC00004,RC00176,RC02860	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2_BFD,NIR_SIR,NIR_SIR_ferr,Pyr_redox_2,Rieske_2
SX1_k127_3826382_0	1297865.APJD01000023_gene1102	0.0	1037.0	COG2072@1|root,COG2072@2|Bacteria,1MUQH@1224|Proteobacteria,2TTY2@28211|Alphaproteobacteria,3JUUJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Flavin-binding monooxygenase-like	MA20_01175	-	-	-	-	-	-	-	-	-	-	-	FMO-like,K_oxygenase
SX1_k127_3826382_1	1297865.APJD01000023_gene1101	3.007e-160	504.0	COG1075@1|root,COG1075@2|Bacteria,1QWJI@1224|Proteobacteria,2TWZK@28211|Alphaproteobacteria,3JTP0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Alpha/beta hydrolase family	MA20_40150	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
SX1_k127_3833504_2	398525.KB900701_gene3587	8.686e-79	265.0	COG2391@1|root,COG2391@2|Bacteria,1MXSE@1224|Proteobacteria,2TRUQ@28211|Alphaproteobacteria,3JS3X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sulphur transport	-	-	-	ko:K07112	-	-	-	-	ko00000	-	-	-	Sulf_transp
SX1_k127_3833504_1	1297865.APJD01000005_gene3561	4.765e-214	666.0	COG0604@1|root,COG0604@2|Bacteria,1MXZ9@1224|Proteobacteria,2TUS6@28211|Alphaproteobacteria,3JRKP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Zinc-binding dehydrogenase	MA20_16610	-	-	-	-	-	-	-	-	-	-	-	ADH_zinc_N
SX1_k127_3833504_0	1297865.APJD01000005_gene3560	1.823e-309	950.0	COG0154@1|root,COG0154@2|Bacteria,1MUVQ@1224|Proteobacteria,2TV11@28211|Alphaproteobacteria,3JWJD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Amidase	-	-	6.3.5.6,6.3.5.7	ko:K02433,ko:K21801	ko00380,ko00970,ko01100,map00380,map00970,map01100	-	R03905,R04212	RC00010	ko00000,ko00001,ko01000,ko03029	-	-	-	Amidase
SX1_k127_3860992_0	1297865.APJD01000014_gene494	0.0	1157.0	COG1529@1|root,COG1529@2|Bacteria,1MUEA@1224|Proteobacteria,2TQMW@28211|Alphaproteobacteria,3JQVN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain	MA20_27485	-	1.2.5.3	ko:K03520	-	-	R11168	RC02800	ko00000,ko01000	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2
SX1_k127_3860992_1	1297865.APJD01000014_gene495	5.924e-172	555.0	COG2030@1|root,COG2030@2|Bacteria,1NYEM@1224|Proteobacteria,2U0F4@28211|Alphaproteobacteria,3JVIY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	dehydratase	MA20_27475	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3860992_3	1297865.APJD01000014_gene496	8.564e-95	325.0	COG1671@1|root,COG1671@2|Bacteria,1RCZA@1224|Proteobacteria,2U997@28211|Alphaproteobacteria,3JV5Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the UPF0178 family	MA20_27470	-	-	ko:K09768	-	-	-	-	ko00000	-	-	-	DUF188
SX1_k127_3860992_2	1297865.APJD01000014_gene497	3.404e-96	318.0	COG0488@1|root,COG0488@2|Bacteria,1MU37@1224|Proteobacteria,2TR3X@28211|Alphaproteobacteria,3JTPC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	ABC transporter C-terminal domain	uup	GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010528,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031323,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0070894,GO:0071944,GO:0080090,GO:0097159,GO:1901363	-	ko:K15738	-	-	-	-	ko00000,ko02000	3.A.1.120.6	-	-	ABC_tran,ABC_tran_CTD
SX1_k127_3865399_2	1297865.APJD01000005_gene3885	1.764e-283	871.0	COG0365@1|root,COG0365@2|Bacteria,1MUF5@1224|Proteobacteria,2TR3P@28211|Alphaproteobacteria,3JQQ5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	benzoate-CoA ligase	MA20_38120	-	6.2.1.32	ko:K08295	ko00627,ko01120,map00627,map01120	-	R00982	RC00004,RC00174	ko00000,ko00001,ko01000	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_3865399_1	1297865.APJD01000005_gene3886	0.0	1027.0	COG0477@1|root,COG0477@2|Bacteria,1RGPN@1224|Proteobacteria,2TQKW@28211|Alphaproteobacteria,3K6MJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	rmrB	-	-	ko:K03446	-	M00701	-	-	ko00000,ko00002,ko02000	2.A.1.3	-	-	MFS_1
SX1_k127_3865399_3	1297865.APJD01000005_gene3887	7.338e-239	740.0	COG1566@1|root,COG1566@2|Bacteria,1MU7I@1224|Proteobacteria,2TS39@28211|Alphaproteobacteria,3JS4E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Biotin-lipoyl like	rmrA	-	-	ko:K03543	-	M00701	-	-	ko00000,ko00002,ko02000	8.A.1.1	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
SX1_k127_3865399_5	1297865.APJD01000005_gene3888	8.841e-141	450.0	COG1309@1|root,COG1309@2|Bacteria,1R6HR@1224|Proteobacteria,2U4PH@28211|Alphaproteobacteria,3JTHZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	rmrR	-	-	-	-	-	-	-	-	-	-	-	TetR_C_7,TetR_N
SX1_k127_3865399_0	1297865.APJD01000005_gene3889	0.0	1121.0	COG3829@1|root,COG4191@1|root,COG3829@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TQQ9@28211|Alphaproteobacteria,3JTQS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9,Response_reg,dCache_1
SX1_k127_3865399_4	1297865.APJD01000005_gene3890	4.533e-177	555.0	COG0583@1|root,COG0583@2|Bacteria,1MWVU@1224|Proteobacteria,2TQS4@28211|Alphaproteobacteria,3JUJ9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR substrate binding domain	MA20_07165	-	-	ko:K21703	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
SX1_k127_387787_2	1297865.APJD01000039_gene1742	1.875e-32	125.0	COG2989@1|root,COG2989@2|Bacteria,1MV14@1224|Proteobacteria,2TRJ9@28211|Alphaproteobacteria,3JR7I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative peptidoglycan binding domain	-	-	-	ko:K21470	-	-	-	-	ko00000,ko01002,ko01011	-	-	-	PG_binding_1,YkuD
SX1_k127_387787_1	1297865.APJD01000039_gene1742	5.392e-112	361.0	COG2989@1|root,COG2989@2|Bacteria,1MV14@1224|Proteobacteria,2TRJ9@28211|Alphaproteobacteria,3JR7I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative peptidoglycan binding domain	-	-	-	ko:K21470	-	-	-	-	ko00000,ko01002,ko01011	-	-	-	PG_binding_1,YkuD
SX1_k127_387787_0	1297865.APJD01000039_gene1741	0.0	1039.0	COG3108@1|root,COG3108@2|Bacteria,1MWW2@1224|Proteobacteria,2TQZ1@28211|Alphaproteobacteria,3JUBS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bacterial protein of unknown function (DUF882)	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M15_2
SX1_k127_3881717_2	1297865.APJD01000014_gene854	3.661e-129	414.0	28MIW@1|root,2ZAVI@2|Bacteria,1N523@1224|Proteobacteria,2TSDJ@28211|Alphaproteobacteria,3JV6X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3881717_0	1297865.APJD01000014_gene853	3.248e-179	563.0	COG1045@1|root,COG1045@2|Bacteria,1MVFX@1224|Proteobacteria,2TQQ5@28211|Alphaproteobacteria,3JWAU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Serine acetyltransferase, N-terminal	cysE	GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009001,GO:0009058,GO:0009069,GO:0009070,GO:0009314,GO:0009333,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016053,GO:0016407,GO:0016412,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019344,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050896,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234	2.3.1.30	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	M00021	R00586	RC00004,RC00041	ko00000,ko00001,ko00002,ko01000	-	-	-	Hexapep,SATase_N
SX1_k127_3881717_7	172088.AUGA01000020_gene3512	1.089e-38	145.0	2E4B6@1|root,32Z6W@2|Bacteria,1N7QS@1224|Proteobacteria,2UFNH@28211|Alphaproteobacteria,3K055@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3126)	MA20_32250	-	-	-	-	-	-	-	-	-	-	-	DUF3126
SX1_k127_3881717_1	1297865.APJD01000014_gene851	1.474e-151	484.0	2D6JA@1|root,32TME@2|Bacteria,1MXVJ@1224|Proteobacteria,2TQNP@28211|Alphaproteobacteria,3JT96@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3881717_5	1297865.APJD01000014_gene850	2.154e-61	212.0	2DYTB@1|root,32V60@2|Bacteria,1RHCB@1224|Proteobacteria,2U9FA@28211|Alphaproteobacteria,3JZS9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_32235	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3881717_3	1297865.APJD01000014_gene849	2e-114	369.0	COG0663@1|root,COG0663@2|Bacteria,1RD76@1224|Proteobacteria,2U5GR@28211|Alphaproteobacteria,3JTNJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bacterial transferase hexapeptide (six repeats)	MA20_32230	-	-	-	-	-	-	-	-	-	-	-	Hexapep
SX1_k127_3881717_6	1297865.APJD01000014_gene848	1.487e-39	149.0	28YT2@1|root,2ZKKC@2|Bacteria,1N93U@1224|Proteobacteria,2UF4E@28211|Alphaproteobacteria,3K0XV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3881717_8	1297865.APJD01000014_gene847	3.734e-38	143.0	2BHQH@1|root,32BTT@2|Bacteria,1P44G@1224|Proteobacteria,2UY69@28211|Alphaproteobacteria,3K5P9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3881717_4	1297865.APJD01000014_gene846	3.823e-90	297.0	2DGBX@1|root,2ZVCE@2|Bacteria,1RBSZ@1224|Proteobacteria,2U5Z9@28211|Alphaproteobacteria,3JYI7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3888356_3	1297865.APJD01000007_gene1789	4.207e-137	439.0	COG0600@1|root,COG0600@2|Bacteria,1R4FB@1224|Proteobacteria,2U0KP@28211|Alphaproteobacteria,3JWMY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02050	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	BPD_transp_1
SX1_k127_3888356_1	1297865.APJD01000007_gene1788	1.496e-176	556.0	COG1116@1|root,COG1116@2|Bacteria,1N7FP@1224|Proteobacteria,2U19G@28211|Alphaproteobacteria,3JUI5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ATPases associated with a variety of cellular activities	-	-	-	ko:K02049	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	ABC_tran
SX1_k127_3888356_0	1297865.APJD01000007_gene1787	4.925e-231	717.0	COG0715@1|root,COG0715@2|Bacteria,1R9SU@1224|Proteobacteria,2U2W9@28211|Alphaproteobacteria,3JSH8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NMT1-like family	-	-	-	ko:K02051	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	NMT1_2
SX1_k127_3888356_2	1297865.APJD01000007_gene1786	3.119e-142	452.0	COG0473@1|root,COG0473@2|Bacteria,1MUH4@1224|Proteobacteria,2TQKG@28211|Alphaproteobacteria,3JWJW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CE	Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate	leuB	GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.1.1.85	ko:K00052	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	M00432,M00535	R00994,R04426,R10052	RC00084,RC00417,RC03036	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Iso_dh
SX1_k127_388911_2	1297865.APJD01000020_gene277	2.109e-162	523.0	COG1593@1|root,COG1593@2|Bacteria,1MU0F@1224|Proteobacteria,2TQW5@28211|Alphaproteobacteria,3JTXU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Tripartite ATP-independent periplasmic transporter, DctM component	MA20_30170	-	-	-	-	-	-	-	-	-	-	-	DctM
SX1_k127_388911_4	1297865.APJD01000020_gene278	6.244e-113	367.0	COG3090@1|root,COG3090@2|Bacteria,1MVKS@1224|Proteobacteria,2U08K@28211|Alphaproteobacteria,3JQRU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Tripartite ATP-independent periplasmic transporters, DctQ component	MA20_30165	-	-	-	-	-	-	-	-	-	-	-	DctQ
SX1_k127_388911_0	1297865.APJD01000020_gene279	2.239e-215	670.0	COG1638@1|root,COG1638@2|Bacteria,1MWAW@1224|Proteobacteria,2TV91@28211|Alphaproteobacteria,3JRW0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Bacterial extracellular solute-binding protein, family 7	MA20_30160	-	-	-	-	-	-	-	-	-	-	-	DctP
SX1_k127_388911_10	1297865.APJD01000020_gene280	2.626e-37	142.0	2EMTK@1|root,33FFY@2|Bacteria,1N44C@1224|Proteobacteria,2UDYR@28211|Alphaproteobacteria,3K0VH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	TIGRFAM pentapeptide MXKDX repeat protein	MA20_30155	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_388911_6	1297865.APJD01000020_gene281	3.439e-55	195.0	2EHCE@1|root,33B49@2|Bacteria,1RHFN@1224|Proteobacteria,2UD1E@28211|Alphaproteobacteria,3K03F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Evidence 4 Homologs of previously reported genes of	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_388911_9	1297865.APJD01000020_gene282	1.026e-38	146.0	2AEFV@1|root,314AY@2|Bacteria,1N9QK@1224|Proteobacteria,2UFY5@28211|Alphaproteobacteria,3K11P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_388911_13	1297865.APJD01000020_gene283	4.218e-29	120.0	299YZ@1|root,2ZX0P@2|Bacteria,1N9DG@1224|Proteobacteria,2UFFS@28211|Alphaproteobacteria,3K133@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_388911_8	1297865.APJD01000020_gene284	1.444e-44	166.0	2ACCF@1|root,311XM@2|Bacteria,1N2IF@1224|Proteobacteria,2UEVZ@28211|Alphaproteobacteria,3K0AB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_388911_12	1297865.APJD01000020_gene285	7.943e-32	126.0	29FQ6@1|root,302MT@2|Bacteria,1NDMI@1224|Proteobacteria,2UG79@28211|Alphaproteobacteria,3K0XR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_388911_11	1230476.C207_00961	3.293e-37	141.0	2A75K@1|root,30W1F@2|Bacteria,1N242@1224|Proteobacteria,2UE2T@28211|Alphaproteobacteria,3K0TF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_388911_1	1297865.APJD01000020_gene287	5.239e-187	586.0	COG3734@1|root,COG3734@2|Bacteria,1MWGX@1224|Proteobacteria,2TTG8@28211|Alphaproteobacteria,3JS3W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	2-keto-3-deoxy-galactonokinase	dgoK	GO:0003674,GO:0003824,GO:0005975,GO:0006082,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008671,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019520,GO:0019583,GO:0019584,GO:0019752,GO:0032787,GO:0034192,GO:0034194,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0046176,GO:0046395,GO:0046835,GO:0071704,GO:0072329,GO:1901575	2.7.1.58	ko:K00883	ko00052,ko01100,map00052,map01100	M00552	R03387	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	DGOK
SX1_k127_388911_3	1297865.APJD01000020_gene288	1.249e-119	389.0	COG0800@1|root,COG0800@2|Bacteria,1RD0T@1224|Proteobacteria,2U7AQ@28211|Alphaproteobacteria,3JTRJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	KDPG and KHG aldolase	dgoA	GO:0003674,GO:0003824,GO:0005975,GO:0006082,GO:0008150,GO:0008152,GO:0008674,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016830,GO:0016832,GO:0019520,GO:0019583,GO:0019584,GO:0019752,GO:0032787,GO:0034192,GO:0034194,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0046176,GO:0046395,GO:0071704,GO:0072329,GO:1901575	4.1.2.21	ko:K01631	ko00052,ko01100,map00052,map01100	M00552	R01064	RC00307,RC00435	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldolase
SX1_k127_388911_7	1297865.APJD01000020_gene289	8.991e-55	193.0	29BDM@1|root,2ZYBZ@2|Bacteria,1RJQI@1224|Proteobacteria,2U974@28211|Alphaproteobacteria,3JZTE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_41095	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_388911_5	1297865.APJD01000020_gene290	5.678e-56	197.0	2A6ZV@1|root,30VV0@2|Bacteria,1N1YQ@1224|Proteobacteria,2UBYK@28211|Alphaproteobacteria,3K0JA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3899532_1	1297865.APJD01000019_gene3160	0.0	1031.0	COG0138@1|root,COG0138@2|Bacteria,1MUDQ@1224|Proteobacteria,2TRMY@28211|Alphaproteobacteria,3JTQW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Bifunctional purine biosynthesis protein PurH	purH	-	2.1.2.3,3.5.4.10	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	M00048	R01127,R04560	RC00026,RC00263,RC00456	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	AICARFT_IMPCHas,MGS
SX1_k127_3899532_0	1297865.APJD01000019_gene3161	0.0	1106.0	COG5360@1|root,COG5360@2|Bacteria,1MUJ4@1224|Proteobacteria,2TR5G@28211|Alphaproteobacteria,3JRZV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Heparinase II/III-like protein	MA20_25080	-	-	-	-	-	-	-	-	-	-	-	Hepar_II_III
SX1_k127_3901175_7	1297865.APJD01000009_gene2921	1.685e-34	132.0	COG1011@1|root,COG1011@2|Bacteria,1MVWN@1224|Proteobacteria,2TS5K@28211|Alphaproteobacteria,3JQRH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Haloacid dehalogenase-like hydrolase	MA20_05995	-	3.8.1.2	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	-	R05287	RC00697	ko00000,ko00001,ko01000	-	-	-	HAD_2,Hydrolase
SX1_k127_3901175_5	1297865.APJD01000009_gene2922	6.229e-92	306.0	COG2606@1|root,COG2606@2|Bacteria,1RD82@1224|Proteobacteria,2U7H0@28211|Alphaproteobacteria,3JQV7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Aminoacyl-tRNA editing domain	MA20_06000	-	-	-	-	-	-	-	-	-	-	-	tRNA_edit
SX1_k127_3901175_6	1297865.APJD01000009_gene2923	3.367e-69	241.0	2EHBN@1|root,30YYN@2|Bacteria,1RJ5D@1224|Proteobacteria,2UAPP@28211|Alphaproteobacteria,3JZC6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3901175_0	1297865.APJD01000009_gene2924	2.214e-190	595.0	COG0583@1|root,COG0583@2|Bacteria,1MW16@1224|Proteobacteria,2TRIG@28211|Alphaproteobacteria,3JT9F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR family	MA20_06030	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_3901175_2	1297865.APJD01000009_gene2925	1.029e-147	471.0	COG1028@1|root,COG1028@2|Bacteria,1N4J7@1224|Proteobacteria,2TSDX@28211|Alphaproteobacteria,3JTR8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
SX1_k127_3901175_1	1297865.APJD01000009_gene2926	7.474e-150	482.0	COG1741@1|root,COG1741@2|Bacteria,1MVSW@1224|Proteobacteria,2TSR6@28211|Alphaproteobacteria,3JQM8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the pirin family	MA20_06040	-	-	ko:K06911	-	-	-	-	ko00000	-	-	-	Pirin
SX1_k127_3901175_3	1297865.APJD01000009_gene2927	1.354e-122	395.0	COG0655@1|root,COG0655@2|Bacteria,1MW7N@1224|Proteobacteria,2TR4Z@28211|Alphaproteobacteria,3JRQZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the WrbA family	wrbA	GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114	1.6.5.2	ko:K03809	ko00130,ko01110,map00130,map01110	-	R02964,R03643,R03816	RC00819	ko00000,ko00001,ko01000	-	-	-	FMN_red
SX1_k127_3901175_4	1297865.APJD01000009_gene2928	3.119e-99	323.0	COG5653@1|root,COG5653@2|Bacteria,1MWS9@1224|Proteobacteria,2TT7E@28211|Alphaproteobacteria,3JSXP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_6
SX1_k127_3913055_0	1297865.APJD01000009_gene2746	1.339e-238	738.0	COG2199@1|root,COG3706@2|Bacteria,1MVME@1224|Proteobacteria,2TV5Y@28211|Alphaproteobacteria,3JS9X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	diguanylate cyclase	-	-	-	-	-	-	-	-	-	-	-	-	GGDEF
SX1_k127_3913055_2	1297865.APJD01000009_gene2745	9.855e-136	437.0	COG3023@1|root,COG3023@2|Bacteria,1NCI6@1224|Proteobacteria,2TSC2@28211|Alphaproteobacteria,3JTUP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	N-acetylmuramoyl-L-alanine amidase	-	-	-	-	-	-	-	-	-	-	-	-	Amidase_2
SX1_k127_3913055_3	335659.S23_59390	2.483e-83	278.0	2DRK9@1|root,33C5C@2|Bacteria,1RE1R@1224|Proteobacteria,2U8I7@28211|Alphaproteobacteria,3JZ4F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3913055_1	1230476.C207_03609	4.369e-186	584.0	COG0568@1|root,COG0568@2|Bacteria,1MVWR@1224|Proteobacteria,2TR9Q@28211|Alphaproteobacteria,3JSUI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	RNA polymerase sigma factor RpoH	rpoH	-	-	ko:K03089	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r1_2,Sigma70_r2,Sigma70_r4
SX1_k127_3915865_15	1297865.APJD01000014_gene763	5.926e-12	65.0	2CG5P@1|root,302N0@2|Bacteria,1NDN3@1224|Proteobacteria,2UHZN@28211|Alphaproteobacteria,3K17R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3915865_13	1297865.APJD01000014_gene764	6.528e-35	138.0	2AKSQ@1|root,31BJR@2|Bacteria,1N9Q1@1224|Proteobacteria,2UGJE@28211|Alphaproteobacteria,3K1M3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3915865_8	172088.AUGA01000009_gene1683	6.109e-67	233.0	2A9PW@1|root,30YWT@2|Bacteria,1RJKF@1224|Proteobacteria,2U9Q9@28211|Alphaproteobacteria,3JZTC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3915865_1	1297865.APJD01000014_gene766	1.998e-192	604.0	COG0596@1|root,COG0596@2|Bacteria,1NUT9@1224|Proteobacteria,2TVMS@28211|Alphaproteobacteria,3JUAG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative esterase	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
SX1_k127_3915865_7	1297865.APJD01000014_gene767	3.292e-75	254.0	COG3255@1|root,COG3255@2|Bacteria,1RG3A@1224|Proteobacteria,2U8E5@28211|Alphaproteobacteria,3JYTW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Sterol carrier protein	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3915865_11	1297865.APJD01000014_gene769	2.872e-46	169.0	2BT8U@1|root,32NE7@2|Bacteria,1N1J9@1224|Proteobacteria,2UCQH@28211|Alphaproteobacteria,3K01D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3915865_12	1230476.C207_01745	5.255e-37	141.0	2AERF@1|root,314N3@2|Bacteria,1NAUR@1224|Proteobacteria,2UGZ9@28211|Alphaproteobacteria,3K0XH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_31415	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3915865_2	1297865.APJD01000014_gene771	9.532e-162	509.0	COG3637@1|root,COG3637@2|Bacteria,1R4WV@1224|Proteobacteria,2U0V2@28211|Alphaproteobacteria,3JTEK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	OmpA-like transmembrane domain	MA20_31420	-	-	ko:K16079	-	-	-	-	ko00000,ko02000	1.B.4.2.1	-	-	OMP_b-brl
SX1_k127_3915865_5	1297865.APJD01000014_gene772	1.441e-87	289.0	2A8UK@1|root,30XXU@2|Bacteria,1RHB8@1224|Proteobacteria,2U9EM@28211|Alphaproteobacteria,3JZUA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3915865_6	1297865.APJD01000014_gene773	2.695e-83	279.0	COG1846@1|root,COG1846@2|Bacteria,1RE7A@1224|Proteobacteria,2U9HU@28211|Alphaproteobacteria,3JZW9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SX1_k127_3915865_0	1297865.APJD01000014_gene774	0.0	1020.0	COG0654@1|root,COG0654@2|Bacteria,1MUN4@1224|Proteobacteria,2TQT8@28211|Alphaproteobacteria,3JTRW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	FAD binding domain	-	-	1.14.13.127	ko:K05712	ko00360,ko01120,ko01220,map00360,map01120,map01220	M00545	R06786,R06787	RC00236	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_3
SX1_k127_3915865_10	172088.AUGA01000009_gene1675	7.034e-58	204.0	2A7JV@1|root,30WHR@2|Bacteria,1RE3D@1224|Proteobacteria,2UBF5@28211|Alphaproteobacteria,3K5W7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3915865_4	1297865.APJD01000014_gene776	8.506e-111	362.0	COG0457@1|root,COG0457@2|Bacteria,1R6YX@1224|Proteobacteria,2U4TP@28211|Alphaproteobacteria,3JRSA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tetratricopeptide repeat	MA20_31435	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_2
SX1_k127_3915865_3	1297865.APJD01000014_gene777	6.644e-160	511.0	COG2084@1|root,COG2084@2|Bacteria,1MX8V@1224|Proteobacteria,2TVBS@28211|Alphaproteobacteria,3JUVX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Domain of unknown function (DUF1932)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1932,NAD_binding_2
SX1_k127_3915865_9	1297865.APJD01000014_gene778	1.756e-66	227.0	COG0477@1|root,COG2814@2|Bacteria,1R3UT@1224|Proteobacteria,2TR7Z@28211|Alphaproteobacteria,3JU5V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_3917473_1	1297865.APJD01000003_gene6338	5.995e-94	308.0	COG1846@1|root,COG1846@2|Bacteria,1N1CJ@1224|Proteobacteria,2U17H@28211|Alphaproteobacteria,3JV32@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	MA20_22655	-	-	-	-	-	-	-	-	-	-	-	MarR_2
SX1_k127_3917473_0	1297865.APJD01000003_gene6339	3.059e-250	773.0	COG2124@1|root,COG2124@2|Bacteria,1MY2E@1224|Proteobacteria,2TTFN@28211|Alphaproteobacteria,3JSSY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Cytochrome P450	MA20_22650	GO:0003674,GO:0003824,GO:0004497,GO:0005488,GO:0005506,GO:0006805,GO:0008150,GO:0008152,GO:0009410,GO:0009987,GO:0016491,GO:0016705,GO:0018690,GO:0020037,GO:0042221,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071466,GO:0097159,GO:1901363	-	-	-	-	-	-	-	-	-	-	p450
SX1_k127_3918501_0	1037409.BJ6T_20510	0.0	1172.0	COG1475@1|root,COG1475@2|Bacteria,1MVF9@1224|Proteobacteria,2TR0P@28211|Alphaproteobacteria,3JSCN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Evidence Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K03497	-	-	-	-	ko00000,ko03000,ko03036,ko04812	-	-	-	ParBc
SX1_k127_3918501_1	1037409.BJ6T_20530	7.207e-211	666.0	COG2263@1|root,COG2263@2|Bacteria,1QXE7@1224|Proteobacteria,2TX8M@28211|Alphaproteobacteria,3K6T0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Type III restriction enzyme res subunit	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3931662_7	1297865.APJD01000008_gene5552	1.139e-36	139.0	2AEEH@1|root,3149B@2|Bacteria,1N9IZ@1224|Proteobacteria,2UFIG@28211|Alphaproteobacteria,3K0VM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3931662_6	172088.AUGA01000011_gene2713	3.512e-39	152.0	2C0Z1@1|root,32Y66@2|Bacteria,1N9AH@1224|Proteobacteria,2UFBQ@28211|Alphaproteobacteria,3K07K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3931662_5	1297865.APJD01000008_gene5554	8.496e-49	179.0	2DH9F@1|root,2ZYVP@2|Bacteria,1RM5M@1224|Proteobacteria,2VGFP@28211|Alphaproteobacteria,3JZNH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3931662_8	1297865.APJD01000008_gene5555	4.816e-23	98.0	2AGZB@1|root,31784@2|Bacteria,1NJAN@1224|Proteobacteria,2UK4Y@28211|Alphaproteobacteria,3K1XB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3931662_1	1297865.APJD01000008_gene5556	0.0	996.0	COG0154@1|root,COG0154@2|Bacteria,1MWWQ@1224|Proteobacteria,2TSN9@28211|Alphaproteobacteria,3JS0D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the amidase family	MA20_04710	-	3.5.1.4	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	-	R02540,R03096,R03180,R03909,R05551,R05590	RC00010,RC00100,RC00950,RC01025	ko00000,ko00001,ko01000	-	-	-	Amidase
SX1_k127_3931662_3	1297865.APJD01000008_gene5557	2.192e-94	310.0	COG2050@1|root,COG2050@2|Bacteria,1MYM3@1224|Proteobacteria,2U5K2@28211|Alphaproteobacteria,3JR03@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Thioesterase superfamily	MA20_08885	-	-	-	-	-	-	-	-	-	-	-	4HBT
SX1_k127_3931662_4	1297865.APJD01000008_gene5558	2.666e-55	198.0	2EC4C@1|root,33636@2|Bacteria,1RIT8@1224|Proteobacteria,2U9YQ@28211|Alphaproteobacteria,3JZH9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	HdeA/HdeB family	MA20_08880	-	-	ko:K19778	-	-	-	-	ko00000,ko03110	-	-	-	HdeA
SX1_k127_3931662_0	1297865.APJD01000008_gene5559	0.0	1431.0	COG4993@1|root,COG4993@2|Bacteria,1MUQX@1224|Proteobacteria,2TQMV@28211|Alphaproteobacteria,3JSPM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	PQQ-like domain	-	-	1.1.5.2	ko:K00117	ko00030,ko01100,ko01110,ko01130,map00030,map01100,map01110,map01130	-	R06620	RC00066	ko00000,ko00001,ko01000	-	-	-	PQQ,PQQ_2
SX1_k127_3931662_2	1297865.APJD01000008_gene5560	1.638e-168	529.0	COG4249@1|root,COG4249@2|Bacteria,1R3WZ@1224|Proteobacteria,2TUBK@28211|Alphaproteobacteria,3JS5H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Caspase domain	MA20_02090	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14
SX1_k127_3934140_0	1297865.APJD01000005_gene3641	0.0	2099.0	COG1305@1|root,COG4196@1|root,COG1305@2|Bacteria,COG4196@2|Bacteria,1MVAG@1224|Proteobacteria,2TSVH@28211|Alphaproteobacteria,3JRWJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Putative amidoligase enzyme (DUF2126)	MA20_16195	-	-	-	-	-	-	-	-	-	-	-	Bact_transglu_N,DUF2126,Transglut_core
SX1_k127_3934140_1	1297865.APJD01000005_gene3642	0.0	1641.0	COG2307@1|root,COG2308@1|root,COG2307@2|Bacteria,COG2308@2|Bacteria,1MX5P@1224|Proteobacteria,2TRJE@28211|Alphaproteobacteria,3JTPZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Circularly permuted ATP-grasp type 2	MA20_16190	-	-	-	-	-	-	-	-	-	-	-	Alpha-E,CP_ATPgrasp_2
SX1_k127_3934140_2	1297865.APJD01000005_gene3643	4.007e-67	236.0	COG1305@1|root,COG1305@2|Bacteria,1MVMI@1224|Proteobacteria,2TRFC@28211|Alphaproteobacteria,3JUN6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Transglutaminase/protease-like homologues	-	-	-	-	-	-	-	-	-	-	-	-	Bact_transglu_N,Transglut_core
SX1_k127_3941921_7	1297865.APJD01000019_gene3310	1.324e-72	245.0	COG0793@1|root,COG0793@2|Bacteria,1MU39@1224|Proteobacteria,2TRW2@28211|Alphaproteobacteria,3JRNU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the peptidase S41A family	ctpA	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PDZ_2,Peptidase_S41
SX1_k127_3941921_0	1297865.APJD01000019_gene3311	2.822e-275	849.0	COG4942@1|root,COG4942@2|Bacteria,1MY3E@1224|Proteobacteria,2TUSP@28211|Alphaproteobacteria,3JT1N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Peptidase family M23	filA	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
SX1_k127_3941921_5	1297865.APJD01000019_gene3312	7.439e-96	316.0	COG1576@1|root,COG1576@2|Bacteria,1R9Z2@1224|Proteobacteria,2U95Q@28211|Alphaproteobacteria,3JTKT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA	rlmH	-	2.1.1.177	ko:K00783	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	SPOUT_MTase
SX1_k127_3941921_6	1297865.APJD01000019_gene3313	2.668e-77	260.0	COG0799@1|root,COG0799@2|Bacteria,1MZEF@1224|Proteobacteria,2UBSV@28211|Alphaproteobacteria,3JYP9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation	rsfS	-	-	ko:K09710	-	-	-	-	ko00000,ko03009	-	-	-	RsfS
SX1_k127_3941921_4	1297865.APJD01000019_gene3314	6.84e-133	424.0	COG1057@1|root,COG1057@2|Bacteria,1RD0J@1224|Proteobacteria,2U6ZC@28211|Alphaproteobacteria,3JTPE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)	nadD	-	2.7.7.18	ko:K00969	ko00760,ko01100,map00760,map01100	M00115	R00137,R03005	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_like
SX1_k127_3941921_1	1297865.APJD01000019_gene3315	1.142e-270	835.0	COG0014@1|root,COG0014@2|Bacteria,1MUGJ@1224|Proteobacteria,2TS83@28211|Alphaproteobacteria,3JS5B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate	proA	GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114	1.2.1.41	ko:K00147	ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230	M00015	R03313	RC00684	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
SX1_k127_3941921_2	1297865.APJD01000019_gene3316	4.378e-261	809.0	COG0263@1|root,COG0263@2|Bacteria,1MUBG@1224|Proteobacteria,2TRKB@28211|Alphaproteobacteria,3JR70@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate	proB	GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.7.2.11	ko:K00931	ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230	M00015	R00239	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase,PUA
SX1_k127_3941921_3	1502851.FG93_05908	2.468e-137	442.0	COG0536@1|root,COG0536@2|Bacteria,1MUGZ@1224|Proteobacteria,2TR5I@28211|Alphaproteobacteria,3JR6H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control	obg	-	-	ko:K03979	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	GTP1_OBG,MMR_HSR1
SX1_k127_3944191_1	1297865.APJD01000003_gene6320	1.163e-288	887.0	COG0258@1|root,COG0749@1|root,COG0258@2|Bacteria,COG0749@2|Bacteria,1MU31@1224|Proteobacteria,2TRJF@28211|Alphaproteobacteria,3JRVT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	polA	GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576	2.7.7.7	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440	-	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	5_3_exonuc,5_3_exonuc_N,DNA_pol_A,DNA_pol_A_exo1
SX1_k127_3944191_2	1297865.APJD01000003_gene6321	3.354e-146	487.0	COG0745@1|root,COG0745@2|Bacteria,1MY3D@1224|Proteobacteria,2TTKG@28211|Alphaproteobacteria,3JSUX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Transcriptional regulatory protein, C terminal	MA20_22740	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
SX1_k127_3944191_0	1297865.APJD01000003_gene6322	0.0	1138.0	COG0642@1|root,COG0784@1|root,COG0784@2|Bacteria,COG2205@2|Bacteria,1NRP8@1224|Proteobacteria,2TTSR@28211|Alphaproteobacteria,3JT13@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Domain of unknown function (DUF3369)	MA20_22735	-	-	-	-	-	-	-	-	-	-	-	DUF3369,HATPase_c,HisKA,Response_reg
SX1_k127_3944976_0	1297865.APJD01000010_gene4841	0.0	1700.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,3JQQW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Cache domain	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,MHYT,PAS_7,PAS_8,dCache_1
SX1_k127_3944976_10	1297865.APJD01000010_gene4842	1.867e-49	185.0	COG0797@1|root,COG0797@2|Bacteria,1RJ0P@1224|Proteobacteria,2UEDR@28211|Alphaproteobacteria,3JZJX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Lytic transglycolase	-	-	-	ko:K03642	-	-	-	-	ko00000	-	-	-	DPBB_1
SX1_k127_3944976_1	1297865.APJD01000010_gene4843	0.0	1620.0	COG0784@1|root,COG2202@1|root,COG4191@1|root,COG0784@2|Bacteria,COG2202@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TQQ9@28211|Alphaproteobacteria,3JR0R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Response regulator receiver	MA20_35885	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_3,PAS_4,Response_reg
SX1_k127_3944976_5	1297865.APJD01000010_gene4844	2.522e-173	543.0	COG1525@1|root,COG1525@2|Bacteria,1ND4R@1224|Proteobacteria,2U0QF@28211|Alphaproteobacteria,3JRE6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Staphylococcal nuclease homologue	MA20_17580	-	-	-	-	-	-	-	-	-	-	-	SNase
SX1_k127_3944976_13	172088.AUGA01000041_gene4801	5.838e-38	143.0	2EQWN@1|root,33IGF@2|Bacteria,1NA2U@1224|Proteobacteria,2UH9R@28211|Alphaproteobacteria,3K13C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3944976_2	1230476.C207_06006	0.0	1302.0	COG4770@1|root,COG4770@2|Bacteria,1P6RE@1224|Proteobacteria,2TRC2@28211|Alphaproteobacteria,3JSG7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Biotin carboxylase C-terminal domain	pccA	GO:0003674,GO:0003824,GO:0004658,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009374,GO:0009987,GO:0016421,GO:0016874,GO:0016885,GO:0017144,GO:0019752,GO:0019842,GO:0019899,GO:0031406,GO:0031974,GO:0032787,GO:0033218,GO:0033293,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0070013,GO:0071704,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901681	6.4.1.3	ko:K01965	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	M00373,M00741	R01859	RC00097,RC00609	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2
SX1_k127_3944976_4	1297865.APJD01000010_gene4847	2.925e-175	552.0	COG2513@1|root,COG2513@2|Bacteria,1N4VT@1224|Proteobacteria,2TUUN@28211|Alphaproteobacteria,3JRMG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Catalyzes the decarboxylation of oxaloacetate into pyruvate. Seems to play a role in maintaining cellular concentrations of bicarbonate and pyruvate	-	-	4.1.1.3	ko:K01003	ko00620,ko01100,map00620,map01100	-	R00217	RC00040	ko00000,ko00001,ko01000	-	-	-	PEP_mutase
SX1_k127_3944976_9	1297865.APJD01000010_gene4848	5.94e-55	206.0	COG1254@1|root,COG1254@2|Bacteria,1PU46@1224|Proteobacteria,2UF7Z@28211|Alphaproteobacteria,3K02B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Belongs to the acylphosphatase family	acyP	GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818	3.6.1.7	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120	-	R00317,R01421,R01515	RC00043	ko00000,ko00001,ko01000	-	-	-	Acylphosphatase
SX1_k127_3944976_8	1230476.C207_06003	5.848e-113	365.0	COG1510@1|root,COG1510@2|Bacteria,1RA49@1224|Proteobacteria,2U2X2@28211|Alphaproteobacteria,3JV73@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory protein, arsR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_5,MarR_2
SX1_k127_3944976_7	1230476.C207_06002	2.164e-135	432.0	29Q66@1|root,30B54@2|Bacteria,1N9YZ@1224|Proteobacteria,2TS6J@28211|Alphaproteobacteria,3JSHI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF4166)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4166
SX1_k127_3944976_3	1297865.APJD01000010_gene4851	9.289e-302	930.0	COG1090@1|root,COG1090@2|Bacteria,1MUB4@1224|Proteobacteria,2TRY5@28211|Alphaproteobacteria,3JRAI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF1731)	-	-	-	ko:K07071	-	-	-	-	ko00000	-	-	-	DUF1731,Epimerase
SX1_k127_3944976_14	1230476.C207_06000	7.718e-17	87.0	2AGT7@1|root,31719@2|Bacteria,1NIW4@1224|Proteobacteria,2UMGN@28211|Alphaproteobacteria,3K1UE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_3944976_6	1297865.APJD01000010_gene4852	2.651e-158	499.0	COG0321@1|root,COG0321@2|Bacteria,1MU6A@1224|Proteobacteria,2TRXJ@28211|Alphaproteobacteria,3JTKG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate	lipB	GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564	2.3.1.181	ko:K03801	ko00785,ko01100,map00785,map01100	-	R07766,R07769	RC00039,RC00992,RC02867	ko00000,ko00001,ko01000	-	-	-	BPL_LplA_LipB
SX1_k127_3944976_12	1230476.C207_05998	8.408e-43	157.0	COG1886@1|root,COG1886@2|Bacteria,1N1JC@1224|Proteobacteria,2UC3S@28211|Alphaproteobacteria,3K03R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	Type III flagellar switch regulator (C-ring) FliN C-term	QU41_23035	-	-	ko:K02417	ko02030,ko02040,map02030,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2,3.A.6.3	-	-	FliMN_C
SX1_k127_3944976_11	1297865.APJD01000010_gene4854	9.051e-48	171.0	COG3344@1|root,COG3344@2|Bacteria,1R44F@1224|Proteobacteria,2U6GB@28211|Alphaproteobacteria,3K6C2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Reverse transcriptase (RNA-dependent DNA polymerase)	-	-	-	-	-	-	-	-	-	-	-	-	RVT_1
SX1_k127_3948315_20	1297865.APJD01000019_gene3265	1.551e-27	119.0	COG4978@1|root,COG4978@2|Bacteria,1R4X9@1224|Proteobacteria,2TUZK@28211|Alphaproteobacteria,3JTV1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KT	Bacterial transcription activator, effector binding domain	MA20_43725	-	-	-	-	-	-	-	-	-	-	-	GyrI-like
SX1_k127_3948315_4	1297865.APJD01000019_gene3266	7.634e-194	605.0	COG0253@1|root,COG0253@2|Bacteria,1MWDH@1224|Proteobacteria,2TUF2@28211|Alphaproteobacteria,3JR65@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan	dapF	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	5.1.1.7	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00527	R02735	RC00302	ko00000,ko00001,ko00002,ko01000	-	-	-	DAP_epimerase
SX1_k127_3948315_2	1297865.APJD01000019_gene3267	1.675e-274	846.0	COG0621@1|root,COG0621@2|Bacteria,1MUCS@1224|Proteobacteria,2TRYD@28211|Alphaproteobacteria,3JTP7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	MiaB-like tRNA modifying enzyme	mtaB	GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035598,GO:0035600,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050497,GO:0071704,GO:0090304,GO:1901360	2.8.4.5	ko:K18707	-	-	R10649	RC00003,RC03221	ko00000,ko01000,ko03016	-	-	-	Radical_SAM,UPF0004
SX1_k127_3948315_3	1297865.APJD01000019_gene3269	1.058e-231	730.0	COG5330@1|root,COG5330@2|Bacteria,1R3VY@1224|Proteobacteria,2TUGG@28211|Alphaproteobacteria,3JUE9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterised protein conserved in bacteria (DUF2336)	MA20_43740	-	-	-	-	-	-	-	-	-	-	-	DUF2336
SX1_k127_3948315_8	1297865.APJD01000019_gene3270	3.462e-157	496.0	COG0564@1|root,COG0564@2|Bacteria,1MVJ5@1224|Proteobacteria,2TSCG@28211|Alphaproteobacteria,3JRTQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Pseudouridine synthase	MA20_43745	-	5.4.99.28,5.4.99.29	ko:K06177	-	-	-	-	ko00000,ko01000,ko03009,ko03016	-	-	-	PseudoU_synth_2
SX1_k127_3948315_5	1297865.APJD01000019_gene3271	4.19e-189	592.0	COG0552@1|root,COG0552@2|Bacteria,1MUDU@1224|Proteobacteria,2TS0M@28211|Alphaproteobacteria,3JQNZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components	ftsY	-	-	ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2,3.A.5.7	-	-	SRP54,SRP54_N
SX1_k127_3948315_15	1297865.APJD01000019_gene3272	6.122e-121	392.0	COG2917@1|root,COG2917@2|Bacteria,1NWIZ@1224|Proteobacteria,2U74X@28211|Alphaproteobacteria,3JU97@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	probably involved in intracellular septation	ispZ	-	-	ko:K06190	-	-	-	-	ko00000	-	-	-	IspA
SX1_k127_3948315_19	1297865.APJD01000019_gene3273	3.413e-67	230.0	COG1555@1|root,COG1555@2|Bacteria,1N7MI@1224|Proteobacteria,2U8WE@28211|Alphaproteobacteria,3JYXP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Helix-hairpin-helix motif	-	-	-	-	-	-	-	-	-	-	-	-	HHH_3
SX1_k127_3948315_13	1297865.APJD01000019_gene3274	1.565e-126	408.0	COG0526@1|root,COG0526@2|Bacteria,1RI3N@1224|Proteobacteria,2TSEW@28211|Alphaproteobacteria,3JRPK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CO	Redoxin	ccmG	GO:0005575,GO:0005623,GO:0042597,GO:0044464	-	ko:K02199	-	-	-	-	ko00000,ko03110	-	-	-	AhpC-TSA,Redoxin
SX1_k127_3948315_21	1297865.APJD01000019_gene3275	2.303e-26	109.0	2EIRC@1|root,33CGS@2|Bacteria,1N6T1@1224|Proteobacteria,2UFW2@28211|Alphaproteobacteria,3K0VT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes	ccmD	-	-	ko:K02196	ko02010,map02010	-	-	-	ko00000,ko00001,ko02000	3.A.1.107	-	-	CcmD
SX1_k127_3948315_6	1297865.APJD01000019_gene3276	2.063e-163	516.0	COG0755@1|root,COG0755@2|Bacteria,1MU61@1224|Proteobacteria,2TSW8@28211|Alphaproteobacteria,3JRN5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes	ccmC	GO:0001539,GO:0002048,GO:0002049,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005575,GO:0005623,GO:0005886,GO:0006518,GO:0006629,GO:0006643,GO:0006664,GO:0006807,GO:0006810,GO:0006928,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009237,GO:0009247,GO:0009636,GO:0009987,GO:0015886,GO:0016020,GO:0016209,GO:0016491,GO:0016684,GO:0019184,GO:0019290,GO:0019748,GO:0034641,GO:0040011,GO:0042221,GO:0043043,GO:0043107,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044464,GO:0044550,GO:0046467,GO:0048870,GO:0050896,GO:0051179,GO:0051181,GO:0051186,GO:0051188,GO:0051234,GO:0051674,GO:0051716,GO:0055114,GO:0070887,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0071973,GO:0071975,GO:0071977,GO:0071978,GO:0097237,GO:0097588,GO:0098754,GO:0098869,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901678,GO:1903509,GO:1990748	-	ko:K02195	ko02010,map02010	M00259	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.107	-	-	Cytochrom_C_asm
SX1_k127_3948315_14	1297865.APJD01000019_gene3277	2.138e-123	397.0	COG2386@1|root,COG2386@2|Bacteria,1NJB0@1224|Proteobacteria,2TUSG@28211|Alphaproteobacteria,3JR6J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes	ccmB	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016021,GO:0031224,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351	-	ko:K02194	ko02010,map02010	M00259	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.107	-	-	CcmB
SX1_k127_3948315_16	1297865.APJD01000019_gene3278	3.993e-113	368.0	COG4133@1|root,COG4133@2|Bacteria,1MZPC@1224|Proteobacteria,2TVBT@28211|Alphaproteobacteria,3JR9H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system	ccmA	-	3.6.3.41	ko:K02193	ko02010,map02010	M00259	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.107	-	-	ABC_tran
SX1_k127_3948315_0	1297865.APJD01000019_gene3279	0.0	1843.0	COG1048@1|root,COG1048@2|Bacteria,1MU9T@1224|Proteobacteria,2TT3T@28211|Alphaproteobacteria,3JQVB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate	acnA	GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0045333,GO:0046459,GO:0047456,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:1901363	4.2.1.3	ko:K01681	ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230	M00009,M00010,M00012,M00173,M00740	R01324,R01325,R01900	RC00497,RC00498,RC00618	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Aconitase,Aconitase_C
SX1_k127_3948315_7	1297865.APJD01000019_gene3280	2.029e-161	510.0	COG5429@1|root,COG5429@2|Bacteria,1MW6R@1224|Proteobacteria,2U33F@28211|Alphaproteobacteria,3JVYD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1223)	MA20_43790	-	-	-	-	-	-	-	-	-	-	-	DUF1223
SX1_k127_3948315_18	172088.AUGA01000018_gene2189	1.295e-69	237.0	2CCMQ@1|root,32RW3@2|Bacteria,1MZHB@1224|Proteobacteria,2UCC9@28211|Alphaproteobacteria,3JYQ9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2794)	MA20_43795	-	-	-	-	-	-	-	-	-	-	-	DUF2794
SX1_k127_3948315_9	1297865.APJD01000019_gene3282	4.862e-157	497.0	COG0670@1|root,COG0670@2|Bacteria,1MU69@1224|Proteobacteria,2TRSF@28211|Alphaproteobacteria,3JSSN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the BI1 family	ybhL	-	-	ko:K06890	-	-	-	-	ko00000	-	-	-	Bax1-I
SX1_k127_3948315_1	1297865.APJD01000019_gene3283	0.0	1628.0	COG3127@1|root,COG3127@2|Bacteria,1MU9R@1224|Proteobacteria,2TS8V@28211|Alphaproteobacteria,3JUPK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	FtsX-like permease family	MA20_43810	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
SX1_k127_3948315_10	1297865.APJD01000019_gene3284	4.652e-144	466.0	COG4181@1|root,COG4181@2|Bacteria,1MXG9@1224|Proteobacteria,2TS0J@28211|Alphaproteobacteria,3JS8X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	ABC transporter	ybbA	GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
SX1_k127_3948315_12	1297865.APJD01000019_gene3285	4.109e-128	413.0	COG2755@1|root,COG2755@2|Bacteria,1RCXZ@1224|Proteobacteria,2U74E@28211|Alphaproteobacteria,3JQRR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	GDSL-like Lipase/Acylhydrolase	tesA	-	3.1.1.5	ko:K10804	ko01040,map01040	-	-	-	ko00000,ko00001,ko01000,ko01004	-	-	-	Lipase_GDSL_2
SX1_k127_3948315_17	1297865.APJD01000019_gene3286	2.052e-109	357.0	COG1514@1|root,COG1514@2|Bacteria,1RDB2@1224|Proteobacteria,2U7FV@28211|Alphaproteobacteria,3JTFI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester	ligT	-	3.1.4.58	ko:K01975	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	LigT_PEase
SX1_k127_3948315_22	1380355.JNIJ01000014_gene485	6.11e-17	81.0	COG1485@1|root,COG1485@2|Bacteria,1MUUW@1224|Proteobacteria,2TRG1@28211|Alphaproteobacteria,3JRCC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	AFG1-like ATPase	zapE	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0006091,GO:0006119,GO:0006123,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016310,GO:0017144,GO:0019538,GO:0019637,GO:0019646,GO:0019693,GO:0022900,GO:0022904,GO:0030163,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0034641,GO:0035694,GO:0042773,GO:0042775,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0071840,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901565,GO:1901575	-	ko:K06916	-	-	-	-	ko00000,ko03036	-	-	-	AFG1_ATPase
SX1_k127_3950646_4	1230476.C207_01667	5.415e-14	74.0	COG2847@1|root,COG2847@2|Bacteria,1RK52@1224|Proteobacteria,2UA1C@28211|Alphaproteobacteria,3JZCA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Copper chaperone PCu(A)C	-	-	-	-	-	-	-	-	-	-	-	-	PCuAC
SX1_k127_3950646_0	1297865.APJD01000002_gene4035	0.0	1137.0	COG0028@1|root,COG0028@2|Bacteria,1MXDW@1224|Proteobacteria,2TT9X@28211|Alphaproteobacteria,3JTI9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Belongs to the TPP enzyme family	-	-	2.2.1.6	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R00006,R00014,R00226,R03050,R04672,R04673,R08648	RC00027,RC00106,RC01192,RC02744,RC02893	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
SX1_k127_3950646_1	1297865.APJD01000002_gene4034	5e-324	994.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JRKR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	-	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
SX1_k127_3950646_2	1297865.APJD01000002_gene4033	7.845e-146	464.0	COG1802@1|root,COG1802@2|Bacteria,1MY2M@1224|Proteobacteria,2U3FK@28211|Alphaproteobacteria,3K601@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SX1_k127_3950646_3	1297865.APJD01000002_gene4032	4.846e-42	156.0	COG0510@1|root,COG0510@2|Bacteria,1PDP6@1224|Proteobacteria,2VBSW@28211|Alphaproteobacteria,3JXTF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Choline/ethanolamine kinase	-	-	-	-	-	-	-	-	-	-	-	-	APH
SX1_k127_3952360_0	1297865.APJD01000007_gene1949	9.422e-237	734.0	COG0501@1|root,COG0501@2|Bacteria,1MUV4@1224|Proteobacteria,2TS3N@28211|Alphaproteobacteria,3JRCT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Belongs to the peptidase M48B family	htpX	-	-	ko:K03799	-	M00743	-	-	ko00000,ko00002,ko01000,ko01002	-	-	-	Peptidase_M48
SX1_k127_3952360_2	398525.KB900701_gene7270	1.082e-115	375.0	COG1704@1|root,COG1704@2|Bacteria,1MVH0@1224|Proteobacteria,2U6EM@28211|Alphaproteobacteria,3JSVH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	LemA family	MA20_42455	-	-	ko:K03744	-	-	-	-	ko00000	-	-	-	LemA
SX1_k127_3952360_1	1297865.APJD01000007_gene1951	2.455e-211	657.0	COG5459@1|root,COG5459@2|Bacteria,1MWMM@1224|Proteobacteria,2TQX8@28211|Alphaproteobacteria,3JT6V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Mitochondrial small ribosomal subunit Rsm22	-	-	-	-	-	-	-	-	-	-	-	-	Rsm22
SX1_k127_3952360_3	1230476.C207_00353	6.363e-43	156.0	COG1196@1|root,COG1196@2|Bacteria,1MUAQ@1224|Proteobacteria,2TRQG@28211|Alphaproteobacteria,3JUPU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Required for chromosome condensation and partitioning	smc	-	-	ko:K03529	-	-	-	-	ko00000,ko03036	-	-	-	SMC_N
SX1_k127_3955491_4	1297865.APJD01000020_gene176	5.756e-112	362.0	COG1008@1|root,COG1008@2|Bacteria,1MV7V@1224|Proteobacteria,2TSNK@28211|Alphaproteobacteria,3JTNA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NADH-ubiquinone oxidoreductase chain 4, amino terminus	nuoM	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	1.6.5.3	ko:K00342	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q5_N,Proton_antipo_M
SX1_k127_3955491_2	1297865.APJD01000020_gene177	8.16e-281	866.0	COG1007@1|root,COG1007@2|Bacteria,1MV56@1224|Proteobacteria,2TQMX@28211|Alphaproteobacteria,3JSRU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoN	-	1.6.5.3	ko:K00343	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Proton_antipo_M
SX1_k127_3955491_3	1297865.APJD01000020_gene178	2.549e-164	520.0	COG0340@1|root,COG0340@2|Bacteria,1MWCC@1224|Proteobacteria,2TS82@28211|Alphaproteobacteria,3JR9E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Biotin protein ligase C terminal domain	birA	-	6.3.4.15	ko:K03524	ko00780,ko01100,map00780,map01100	-	R01074,R05145	RC00043,RC00070,RC00096,RC02896	ko00000,ko00001,ko01000,ko03000	-	-	-	BPL_C,BPL_LplA_LipB
SX1_k127_3955491_0	1297865.APJD01000020_gene179	0.0	1124.0	COG0595@1|root,COG0595@2|Bacteria,1MUGV@1224|Proteobacteria,2TQTR@28211|Alphaproteobacteria,3JRQE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Zn-dependent metallo-hydrolase RNA specificity domain	rnjA	-	-	ko:K12574	ko03018,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	Lactamase_B,Lactamase_B_2,RMMBL
SX1_k127_3955491_5	1297865.APJD01000020_gene180	1.311e-83	277.0	COG0346@1|root,COG0346@2|Bacteria,1RCYU@1224|Proteobacteria,2U728@28211|Alphaproteobacteria,3JY01@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	mce	-	5.1.99.1	ko:K05606	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	M00373,M00375,M00376,M00741	R02765,R09979	RC00780,RC02739	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyoxalase_4
SX1_k127_3955491_6	1297865.APJD01000020_gene181	2.267e-60	211.0	COG5454@1|root,COG5454@2|Bacteria,1N6T0@1224|Proteobacteria,2UF4C@28211|Alphaproteobacteria,3JZFS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1467)	MA20_37275	-	-	-	-	-	-	-	-	-	-	-	DUF1467
SX1_k127_3955491_1	1297865.APJD01000020_gene182	2.65e-286	880.0	COG4857@1|root,COG4857@2|Bacteria,1MXBW@1224|Proteobacteria,2TR0Z@28211|Alphaproteobacteria,3JR7F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate	mtnK	-	2.7.1.100	ko:K00899	ko00270,ko01100,map00270,map01100	M00034	R04143	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	APH
SX1_k127_3958045_1	1297865.APJD01000010_gene4835	2.05e-193	605.0	COG3119@1|root,COG3119@2|Bacteria,1QW7Q@1224|Proteobacteria,2TWRI@28211|Alphaproteobacteria,3JSYU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Type I phosphodiesterase / nucleotide pyrophosphatase	-	-	-	-	-	-	-	-	-	-	-	-	Phosphodiest
SX1_k127_3958045_0	1297865.APJD01000010_gene4836	0.0	2031.0	COG3696@1|root,COG3696@2|Bacteria,1NUIV@1224|Proteobacteria,2TRWM@28211|Alphaproteobacteria,3JRVP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	-	-	-	ko:K15726	-	-	-	-	ko00000,ko02000	2.A.6.1.2	-	-	ACR_tran
SX1_k127_3958045_2	113395.AXAI01000017_gene4756	2.08e-104	342.0	COG0845@1|root,COG0845@2|Bacteria,1MX8W@1224|Proteobacteria,2TRPM@28211|Alphaproteobacteria,3JQVP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K15727	-	-	-	-	ko00000,ko02000	8.A.1.2.1	-	-	HlyD_D23
SX1_k127_3959354_1	1297865.APJD01000006_gene4691	4.443e-120	387.0	2EAB6@1|root,334FE@2|Bacteria,1R4B5@1224|Proteobacteria,2U21J@28211|Alphaproteobacteria,3JWR9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	LTXXQ motif family protein	-	-	-	ko:K07803	ko02020,map02020	-	-	-	ko00000,ko00001,ko03110	-	-	-	LTXXQ
SX1_k127_3959354_2	1297865.APJD01000006_gene4692	4.994e-78	261.0	COG1414@1|root,COG1414@2|Bacteria,1RG5P@1224|Proteobacteria,2U7VM@28211|Alphaproteobacteria,3JYVP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	IclR helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_IclR
SX1_k127_3959354_0	1297865.APJD01000006_gene4693	3.446e-226	702.0	COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,2TS1R@28211|Alphaproteobacteria,3JV4N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the thiolase family	MA20_45145	-	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
SX1_k127_3980559_2	1297865.APJD01000011_gene6723	1.292e-170	536.0	COG0235@1|root,COG0235@2|Bacteria,1MWP9@1224|Proteobacteria,2TRMV@28211|Alphaproteobacteria,3JUHS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Class II Aldolase and Adducin N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Aldolase_II
SX1_k127_3980559_1	1297865.APJD01000011_gene6722	1.415e-196	613.0	COG1893@1|root,COG1893@2|Bacteria,1QZG9@1224|Proteobacteria,2U2Y4@28211|Alphaproteobacteria,3K5Z8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Ketopantoate reductase PanE/ApbA C terminal	-	-	1.1.1.169	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	M00119	R02472	RC00726	ko00000,ko00001,ko00002,ko01000	-	-	-	ApbA,ApbA_C
SX1_k127_3980559_0	1297865.APJD01000011_gene6721	0.0	1112.0	COG1384@1|root,COG1384@2|Bacteria,1MV32@1224|Proteobacteria,2TQYH@28211|Alphaproteobacteria,3JU8P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the class-I aminoacyl-tRNA synthetase family	lysS	-	6.1.1.6	ko:K04566	ko00970,map00970	M00360	R03658	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_1f
SX1_k127_3988546_6	1297865.APJD01000005_gene3827	6.845e-52	183.0	COG0604@1|root,COG0604@2|Bacteria,1MX8A@1224|Proteobacteria,2TVPQ@28211|Alphaproteobacteria,3JQNY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Zinc-binding dehydrogenase	MA20_15185	-	1.6.5.5	ko:K00344	-	-	-	-	ko00000,ko01000	-	-	-	ADH_N,ADH_zinc_N
SX1_k127_3988546_4	1297865.APJD01000005_gene3826	8.173e-167	524.0	COG2334@1|root,COG2334@2|Bacteria,1R78A@1224|Proteobacteria,2TUGC@28211|Alphaproteobacteria,3K2AY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Phosphotransferase enzyme family	-	-	-	-	-	-	-	-	-	-	-	-	APH
SX1_k127_3988546_7	288000.BBta_3559	6.925e-39	154.0	COG4552@1|root,COG4552@2|Bacteria,1MZ5Y@1224|Proteobacteria,2UUEF@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_9
SX1_k127_3988546_1	1297865.APJD01000005_gene3825	4.096e-274	847.0	COG0053@1|root,COG0053@2|Bacteria,1MUDS@1224|Proteobacteria,2TT78@28211|Alphaproteobacteria,3JQTV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family	MA20_15190	-	-	-	-	-	-	-	-	-	-	-	Cation_efflux,ZT_dimer
SX1_k127_3988546_0	1297865.APJD01000005_gene3824	0.0	1523.0	COG0642@1|root,COG2205@2|Bacteria,1NRP8@1224|Proteobacteria,2TRHH@28211|Alphaproteobacteria,3JSG2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	PAS fold	pleC	-	2.7.13.3	ko:K07716	ko02020,ko04112,map02020,map04112	M00511	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA,PAS,PAS_3,PAS_7
SX1_k127_3988546_3	1297865.APJD01000005_gene3823	6.541e-193	616.0	COG0583@1|root,COG0583@2|Bacteria,1N4P5@1224|Proteobacteria,2TQYX@28211|Alphaproteobacteria,3JS6Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR family	QU41_25640	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_3988546_5	1297865.APJD01000005_gene3822	2.18e-97	318.0	COG1905@1|root,COG1905@2|Bacteria,1RHBU@1224|Proteobacteria,2U72T@28211|Alphaproteobacteria,3JR46@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Thioredoxin-like [2Fe-2S] ferredoxin	fdsG	-	-	ko:K00127	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	-	R00519	RC02796	ko00000,ko00001	-	-	-	2Fe-2S_thioredx
SX1_k127_3988546_2	1297865.APJD01000005_gene3821	4.066e-222	689.0	COG1894@1|root,COG1894@2|Bacteria,1MV8F@1224|Proteobacteria,2TR1V@28211|Alphaproteobacteria,3JRTE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region	fdsB	-	1.6.5.3	ko:K00124,ko:K00335	ko00190,ko00630,ko00680,ko01100,ko01120,ko01200,map00190,map00630,map00680,map01100,map01120,map01200	M00144	R00519,R11945	RC00061,RC02796	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_51K,NADH_4Fe-4S,SLBB
SX1_k127_399177_5	1297865.APJD01000020_gene256	3.257e-68	234.0	COG2877@1|root,COG2877@2|Bacteria,1MV91@1224|Proteobacteria,2TRJX@28211|Alphaproteobacteria,3JUB6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	3-deoxy-D-manno-octulosonic acid 8-phosphate synthase	kdsA	-	2.5.1.55	ko:K01627	ko00540,ko01100,map00540,map01100	M00063	R03254	RC00435	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	DAHP_synth_1
SX1_k127_399177_7	1297865.APJD01000020_gene255	1.698e-63	220.0	COG4104@1|root,COG4104@2|Bacteria,1REJN@1224|Proteobacteria,2U7TV@28211|Alphaproteobacteria,3JZBF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PAAR motif	-	-	-	-	-	-	-	-	-	-	-	-	PAAR_motif
SX1_k127_399177_6	1297865.APJD01000020_gene254	7.445e-64	226.0	COG5507@1|root,COG5507@2|Bacteria,1RH3Q@1224|Proteobacteria,2U9SM@28211|Alphaproteobacteria,3JYTR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	NIPSNAP	MA20_41850	-	-	-	-	-	-	-	-	-	-	-	NIPSNAP
SX1_k127_399177_1	1297865.APJD01000020_gene253	1.029e-136	436.0	COG0745@1|root,COG0745@2|Bacteria,1NCKY@1224|Proteobacteria,2TRPQ@28211|Alphaproteobacteria,3JRDE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Transcriptional regulatory protein, C terminal	-	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
SX1_k127_399177_0	1297865.APJD01000020_gene252	1.35e-288	899.0	COG0642@1|root,COG2205@2|Bacteria,1N1Z2@1224|Proteobacteria,2TVIP@28211|Alphaproteobacteria,3JSKQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
SX1_k127_399177_2	1297865.APJD01000020_gene251	1.834e-128	415.0	COG3963@1|root,COG3963@2|Bacteria,1N1KB@1224|Proteobacteria,2U646@28211|Alphaproteobacteria,3JSCT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Ribosomal RNA adenine dimethylase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25,RrnaAD
SX1_k127_399177_4	1297865.APJD01000020_gene250	1.926e-70	250.0	COG1219@1|root,COG1219@2|Bacteria,1P07H@1224|Proteobacteria,2UU1R@28211|Alphaproteobacteria,3K501@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	ClpX C4-type zinc finger	-	-	-	-	-	-	-	-	-	-	-	-	zf-C4_ClpX
SX1_k127_399177_3	1297865.APJD01000020_gene249	7.046e-107	346.0	COG0504@1|root,COG0504@2|Bacteria,1MUIT@1224|Proteobacteria,2TS4Y@28211|Alphaproteobacteria,3JTRN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates	pyrG	-	6.3.4.2	ko:K01937	ko00240,ko01100,map00240,map01100	M00052	R00571,R00573	RC00010,RC00074	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_synth_N,GATase
SX1_k127_4002335_2	1297865.APJD01000011_gene6682	2.513e-44	161.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JU6X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	MA20_18580	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
SX1_k127_4002335_0	1297865.APJD01000011_gene6683	1.506e-243	758.0	COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,2TQQ7@28211|Alphaproteobacteria,3JR1V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the thiolase family	MA20_18575	-	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
SX1_k127_4002335_1	1297865.APJD01000011_gene6684	5.391e-81	270.0	COG1960@1|root,COG1960@2|Bacteria,1MVJC@1224|Proteobacteria,2TQRA@28211|Alphaproteobacteria,3JV0K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, middle domain	MA20_18570	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_4004791_2	1297865.APJD01000012_gene1388	2.867e-205	639.0	COG0657@1|root,COG0657@2|Bacteria,1NEXK@1224|Proteobacteria,2TU54@28211|Alphaproteobacteria,3JV5R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Carboxylesterase family	-	-	-	ko:K01066	-	-	-	-	ko00000,ko01000	-	-	-	Abhydrolase_3
SX1_k127_4004791_1	1297865.APJD01000012_gene1387	0.0	1210.0	COG2072@1|root,COG2072@2|Bacteria,1R8WA@1224|Proteobacteria,2U49W@28211|Alphaproteobacteria,3JQWK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Flavin-binding monooxygenase-like	-	-	-	-	-	-	-	-	-	-	-	-	Pyr_redox_3
SX1_k127_4004791_0	1297865.APJD01000012_gene1386	0.0	1543.0	COG0204@1|root,COG0318@1|root,COG0204@2|Bacteria,COG0318@2|Bacteria,1MWDY@1224|Proteobacteria,2TTGI@28211|Alphaproteobacteria,3JU7A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Phosphate acyltransferases	aas	-	2.3.1.40,6.2.1.20	ko:K05939	ko00071,ko00564,map00071,map00564	-	R01406,R04864	RC00014,RC00039,RC00041	ko00000,ko00001,ko01000	-	-	-	AMP-binding,Acyltransferase,MFS_1
SX1_k127_4006934_2	665571.STHERM_c14190	6.465e-14	79.0	COG1309@1|root,COG1309@2|Bacteria,2J95Q@203691|Spirochaetes	203691|Spirochaetes	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_4006934_0	1299327.I546_0916	3.692e-112	375.0	COG1960@1|root,COG1960@2|Bacteria,2GMEM@201174|Actinobacteria,235E8@1762|Mycobacteriaceae	201174|Actinobacteria	I	acyl-CoA dehydrogenase	-	-	-	ko:K18244	-	-	-	-	ko00000,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_4006934_1	1299327.I546_0915	4.648e-82	283.0	COG1024@1|root,COG1024@2|Bacteria,2I2PC@201174|Actinobacteria,235ED@1762|Mycobacteriaceae	201174|Actinobacteria	I	Enoyl-CoA hydratase	-	-	5.3.3.18	ko:K15866	ko00360,ko01120,map00360,map01120	-	R09837,R09839	RC00004,RC00326,RC02689,RC03003	ko00000,ko00001,ko01000	-	-	-	ECH_1
SX1_k127_4042066_0	1297865.APJD01000015_gene3444	1.634e-257	794.0	COG1960@1|root,COG1960@2|Bacteria,1MW0F@1224|Proteobacteria,2TR9I@28211|Alphaproteobacteria,3JUIJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	acyl-CoA dehydrogenase	MA20_40060	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_4042066_1	1297865.APJD01000015_gene3443	1.333e-169	533.0	COG1024@1|root,COG1024@2|Bacteria,1MWGT@1224|Proteobacteria,2TV7F@28211|Alphaproteobacteria,3JU1Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the enoyl-CoA hydratase isomerase family	MA20_40055	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_4042066_2	1297865.APJD01000015_gene3442	1.286e-137	438.0	COG0045@1|root,COG1042@1|root,COG0045@2|Bacteria,COG1042@2|Bacteria,1MW98@1224|Proteobacteria,2TR24@28211|Alphaproteobacteria,3JRT1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA binding domain	-	-	-	-	-	-	-	-	-	-	-	-	ATP-grasp_5,Acetyltransf_3,CoA_binding_2,Succ_CoA_lig
SX1_k127_4047375_9	1297865.APJD01000003_gene6413	3.605e-76	255.0	2CN5Z@1|root,32SGB@2|Bacteria,1N1FB@1224|Proteobacteria,2UBV1@28211|Alphaproteobacteria,3JYHB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2948)	MA20_21100	-	-	-	-	-	-	-	-	-	-	-	DUF2948
SX1_k127_4047375_3	1297865.APJD01000003_gene6414	7.515e-265	818.0	COG0141@1|root,COG0141@2|Bacteria,1MUUF@1224|Proteobacteria,2TSBN@28211|Alphaproteobacteria,3JR34@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine	hisD	GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.1.1.23	ko:K00013	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R01158,R01163,R03012	RC00099,RC00242,RC00463	ko00000,ko00001,ko00002,ko01000	-	-	-	Histidinol_dh
SX1_k127_4047375_6	1297865.APJD01000003_gene6415	1.05e-104	342.0	COG5328@1|root,COG5328@2|Bacteria,1RA93@1224|Proteobacteria,2U741@28211|Alphaproteobacteria,3JTW9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the UPF0262 family	MA20_21090	-	-	-	-	-	-	-	-	-	-	-	UPF0262
SX1_k127_4047375_7	1297865.APJD01000003_gene6416	3.186e-98	321.0	COG0394@1|root,COG0394@2|Bacteria,1RANV@1224|Proteobacteria,2U5EE@28211|Alphaproteobacteria,3JU2V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Low molecular weight phosphotyrosine protein phosphatase	MA20_21085	-	1.20.4.1,3.1.3.48	ko:K01104,ko:K03741	-	-	-	-	ko00000,ko01000	-	-	-	LMWPc
SX1_k127_4047375_5	1297865.APJD01000003_gene6417	5.447e-129	417.0	COG0424@1|root,COG0424@2|Bacteria,1RH6H@1224|Proteobacteria,2TSS5@28211|Alphaproteobacteria,3JQSH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	nucleoside-triphosphate diphosphatase activity	maf	-	-	ko:K06287	-	-	-	-	ko00000	-	-	-	Maf
SX1_k127_4047375_10	1297865.APJD01000003_gene6418	4.667e-36	136.0	COG3024@1|root,COG3024@2|Bacteria,1NGJ8@1224|Proteobacteria,2UJJF@28211|Alphaproteobacteria,3K11A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase	yacG	-	-	ko:K09862	-	-	-	-	ko00000	-	-	-	YacG
SX1_k127_4047375_11	1197906.CAJQ02000003_gene3219	9.711e-12	65.0	COG1961@1|root,COG1961@2|Bacteria,1MWCZ@1224|Proteobacteria,2TRIY@28211|Alphaproteobacteria,3JUGV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Resolvase	-	-	-	-	-	-	-	-	-	-	-	-	Recombinase,Resolvase,Zn_ribbon_recom
SX1_k127_4047375_1	1297865.APJD01000003_gene6420	0.0	1464.0	COG0542@1|root,COG0542@2|Bacteria,1R8ER@1224|Proteobacteria,2TRK5@28211|Alphaproteobacteria,3K3NQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Torsin	-	-	-	-	-	-	-	-	-	-	-	-	AAA_2,ClpB_D2-small
SX1_k127_4047375_2	1297865.APJD01000003_gene6421	0.0	1004.0	2C10Y@1|root,33VU3@2|Bacteria,1RFVX@1224|Proteobacteria,2U8EA@28211|Alphaproteobacteria,3K2DH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4047375_0	1297865.APJD01000003_gene6422	0.0	1643.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,3JT05@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Putative diguanylate phosphodiesterase	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,PAS_3,PAS_9,Response_reg,sCache_2
SX1_k127_4047375_8	1297865.APJD01000003_gene6423	1.267e-95	312.0	2A75H@1|root,30W1C@2|Bacteria,1RCP6@1224|Proteobacteria,2U6YB@28211|Alphaproteobacteria,3JYP0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4047375_4	1297865.APJD01000003_gene6424	1.738e-239	740.0	COG4249@1|root,COG4249@2|Bacteria,1MXFD@1224|Proteobacteria,2TRW5@28211|Alphaproteobacteria,3JUHG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14
SX1_k127_4047802_2	1297865.APJD01000009_gene2755	1.408e-109	354.0	COG4995@1|root,COG4995@2|Bacteria,1QUP3@1224|Proteobacteria,2TW2P@28211|Alphaproteobacteria,3K6QI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	CHAT domain	-	-	-	-	-	-	-	-	-	-	-	-	CHAT,TPR_12
SX1_k127_4047802_3	398525.KB900701_gene2823	3.156e-52	186.0	2E3FK@1|root,32YEE@2|Bacteria,1N0EV@1224|Proteobacteria,2UBRK@28211|Alphaproteobacteria,3K08W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_04885	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4047802_0	1297865.APJD01000009_gene2757	0.0	1344.0	COG0568@1|root,COG0568@2|Bacteria,1MVNJ@1224|Proteobacteria,2TS6C@28211|Alphaproteobacteria,3JSBI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth	rpoD	-	-	ko:K03086	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_ner,Sigma70_r1_1,Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4
SX1_k127_4047802_1	1297865.APJD01000009_gene2758	0.0	1166.0	COG0358@1|root,COG0358@2|Bacteria,1MUHC@1224|Proteobacteria,2TRU2@28211|Alphaproteobacteria,3JQWZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	dnaG	-	-	ko:K02316	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	DnaB_bind,Toprim_4,Toprim_N,zf-CHC2
SX1_k127_4055587_4	1297865.APJD01000018_gene5689	2.229e-190	597.0	COG3144@1|root,COG3144@2|Bacteria,1N7X4@1224|Proteobacteria,2UF9W@28211|Alphaproteobacteria,3JS1U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Flagellar hook-length control protein FliK	-	-	-	ko:K10565	-	-	-	-	ko00000,ko02035	-	-	-	Flg_hook
SX1_k127_4055587_10	1297865.APJD01000018_gene5688	8.515e-141	448.0	COG1843@1|root,COG1843@2|Bacteria,1MXCG@1224|Proteobacteria,2UCHH@28211|Alphaproteobacteria,3JRET@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Required for flagellar hook formation. May act as a scaffolding protein	flgD	-	-	ko:K02389	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FLgD_tudor,FlgD,FlgD_ig
SX1_k127_4055587_7	1297865.APJD01000018_gene5686	5.332e-160	508.0	COG0596@1|root,COG0596@2|Bacteria,1MX5U@1224|Proteobacteria,2TTK0@28211|Alphaproteobacteria,3JVHS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Alpha/beta hydrolase family	MA20_06435	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
SX1_k127_4055587_14	1297865.APJD01000018_gene5685	1.622e-53	189.0	2AMHV@1|root,31CDG@2|Bacteria,1RGVA@1224|Proteobacteria,2U98Q@28211|Alphaproteobacteria,3JZCI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1153)	MA20_11245	-	-	-	-	-	-	-	-	-	-	-	DUF1153
SX1_k127_4055587_0	1297865.APJD01000018_gene5684	1.395e-315	971.0	COG1766@1|root,COG1766@2|Bacteria,1MUQR@1224|Proteobacteria,2TR6J@28211|Alphaproteobacteria,3JS0P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	The M ring may be actively involved in energy transduction	fliF	-	-	ko:K02409	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2,3.A.6.3	-	-	YscJ_FliF,YscJ_FliF_C
SX1_k127_4055587_3	1297865.APJD01000018_gene5683	1.469e-222	691.0	COG1536@1|root,COG1536@2|Bacteria,1MV9X@1224|Proteobacteria,2TRIV@28211|Alphaproteobacteria,3JSDH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation	fliG	-	-	ko:K02410	ko02030,ko02040,map02030,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FliG_C,FliG_M,FliG_N
SX1_k127_4055587_11	1297865.APJD01000018_gene5682	1.071e-121	399.0	COG1317@1|root,COG1317@2|Bacteria,1NSNC@1224|Proteobacteria,2TUID@28211|Alphaproteobacteria,3JUQR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	Flagellar assembly protein FliH	fliH	-	-	ko:K02411	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2	-	-	FliH
SX1_k127_4055587_13	1297865.APJD01000018_gene5681	9.481e-65	222.0	COG1886@1|root,COG1886@2|Bacteria,1RGWT@1224|Proteobacteria,2UC6U@28211|Alphaproteobacteria,3JYS1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation	fliN	GO:0005575,GO:0005623,GO:0005886,GO:0009288,GO:0009425,GO:0016020,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0071944	-	ko:K02417	ko02030,ko02040,map02030,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2,3.A.6.3	-	-	FliMN_C
SX1_k127_4055587_1	1297865.APJD01000018_gene5680	3.306e-293	901.0	COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,2TQPG@28211|Alphaproteobacteria,3JTQK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Sigma-54 interaction domain	flbD	-	-	ko:K10943	ko02020,ko05111,map02020,map05111	M00515	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	HTH_8,Response_reg,Sigma54_activat
SX1_k127_4055587_15	1297865.APJD01000018_gene5679	5.388e-27	110.0	2ADSE@1|root,313HY@2|Bacteria,1N6U7@1224|Proteobacteria,2UG47@28211|Alphaproteobacteria,3K12P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_11210	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4055587_12	1297865.APJD01000018_gene5678	1.928e-117	379.0	COG1853@1|root,COG1853@2|Bacteria,1MZKY@1224|Proteobacteria,2U22K@28211|Alphaproteobacteria,3JSX3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Flavin reductase like domain	-	-	-	-	-	-	-	-	-	-	-	-	Flavin_Reduct
SX1_k127_4055587_6	1297865.APJD01000018_gene5677	2.944e-164	529.0	COG1116@1|root,COG1116@2|Bacteria,1MUKI@1224|Proteobacteria,2TSP4@28211|Alphaproteobacteria,3JSJB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system	ssuB	-	-	ko:K15555	ko00920,ko02010,map00920,map02010	M00436	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.17.2	-	-	ABC_tran
SX1_k127_4055587_5	1297865.APJD01000018_gene5676	1.014e-167	528.0	COG0600@1|root,COG0600@2|Bacteria,1MWS0@1224|Proteobacteria,2VET7@28211|Alphaproteobacteria,3JQV6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Binding-protein-dependent transport system inner membrane component	ssuC	-	-	ko:K15554	ko00920,ko02010,map00920,map02010	M00436	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.17.2	-	-	BPD_transp_1
SX1_k127_4055587_2	1297865.APJD01000018_gene5675	4.943e-261	808.0	COG2141@1|root,COG2141@2|Bacteria,1MWMV@1224|Proteobacteria,2TTIQ@28211|Alphaproteobacteria,3JT2Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Catalyzes the desulfonation of aliphatic sulfonates	ssuD	-	1.14.14.5	ko:K04091	ko00920,map00920	-	R07210,R10206	RC01779,RC02556	ko00000,ko00001,ko01000	-	-	-	Bac_luciferase
SX1_k127_4055587_9	196490.AUEZ01000051_gene432	8.625e-153	489.0	COG0715@1|root,COG2141@1|root,COG0715@2|Bacteria,COG2141@2|Bacteria,1MWMV@1224|Proteobacteria,2TTIQ@28211|Alphaproteobacteria,3JT2Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Catalyzes the desulfonation of aliphatic sulfonates	ssuD	-	1.14.14.5	ko:K04091	ko00920,map00920	-	R07210,R10206	RC01779,RC02556	ko00000,ko00001,ko01000	-	-	-	Bac_luciferase
SX1_k127_4055587_8	1297865.APJD01000018_gene5673	6.322e-153	484.0	COG0715@1|root,COG0715@2|Bacteria,1MV9S@1224|Proteobacteria,2TTIU@28211|Alphaproteobacteria,3JTNG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ABC transporter, phosphonate, periplasmic substrate-binding protein	-	-	-	ko:K02051,ko:K15553	ko00920,ko02010,map00920,map02010	M00188,M00436	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.16,3.A.1.17,3.A.1.17.2	-	-	NMT1,NMT1_2
SX1_k127_4055880_1	1297865.APJD01000007_gene1971	9.492e-216	673.0	COG1807@1|root,COG1807@2|Bacteria,1QA8B@1224|Proteobacteria,2TY1E@28211|Alphaproteobacteria,3JSHV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Dolichyl-phosphate-mannose-protein mannosyltransferase	MA20_42315	-	-	-	-	-	-	-	-	-	-	-	PMT_2
SX1_k127_4055880_5	1297865.APJD01000007_gene1970	6.457e-161	508.0	COG0164@1|root,COG0164@2|Bacteria,1RA65@1224|Proteobacteria,2U73X@28211|Alphaproteobacteria,3JQUR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	rnhB	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576	3.1.26.4	ko:K03470	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	RNase_HII
SX1_k127_4055880_8	1297865.APJD01000007_gene1969	9.364e-95	313.0	COG0346@1|root,COG0346@2|Bacteria,1N116@1224|Proteobacteria,2UC5P@28211|Alphaproteobacteria,3JYJJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	ko:K07032	-	-	-	-	ko00000	-	-	-	Glyoxalase
SX1_k127_4055880_0	1297865.APJD01000007_gene1968	1.449e-253	782.0	COG1533@1|root,COG1533@2|Bacteria,1MW0H@1224|Proteobacteria,2TQQB@28211|Alphaproteobacteria,3JSMU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Elongator protein 3, MiaB family, Radical SAM	MA20_42330	-	-	-	-	-	-	-	-	-	-	-	Radical_SAM
SX1_k127_4055880_7	1297865.APJD01000007_gene1967	1.363e-112	365.0	COG0463@1|root,COG0463@2|Bacteria,1R4Y2@1224|Proteobacteria,2U6HZ@28211|Alphaproteobacteria,3JS8G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	glycosyl transferase	MA20_42350	-	-	-	-	-	-	-	-	-	-	-	Glycos_transf_2
SX1_k127_4055880_4	1297865.APJD01000007_gene1966	6.126e-198	617.0	COG0454@1|root,COG1846@1|root,COG0454@2|Bacteria,COG1846@2|Bacteria,1MWIC@1224|Proteobacteria,2TRIA@28211|Alphaproteobacteria,3JS62@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Transcriptional regulator, MarR family	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10,MarR_2
SX1_k127_4055880_6	1297865.APJD01000007_gene1965	9.379e-116	373.0	COG0521@1|root,COG0521@2|Bacteria,1R9W2@1224|Proteobacteria,2TTA8@28211|Alphaproteobacteria,3JUQ0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	May be involved in the biosynthesis of molybdopterin	moaB	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0042802,GO:0044424,GO:0044444,GO:0044464	2.7.7.75	ko:K03638	ko00790,ko01100,map00790,map01100	-	R09726	RC00002	ko00000,ko00001,ko01000	-	-	-	MoCF_biosynth
SX1_k127_4055880_3	1297865.APJD01000007_gene1964	1.476e-202	631.0	COG2321@1|root,COG2321@2|Bacteria,1MU4U@1224|Proteobacteria,2TRCS@28211|Alphaproteobacteria,3JRCW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative neutral zinc metallopeptidase	-	-	-	ko:K07054	-	-	-	-	ko00000	-	-	-	Zn_peptidase
SX1_k127_4055880_2	1230476.C207_00364	6.587e-213	661.0	COG2189@1|root,COG2189@2|Bacteria,1MX9M@1224|Proteobacteria,2TSW9@28211|Alphaproteobacteria,3JT5A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Belongs to the N(4) N(6)-methyltransferase family	ccrM	-	2.1.1.72	ko:K13581	ko04112,map04112	-	-	-	ko00000,ko00001,ko01000,ko02048	-	-	-	N6_N4_Mtase
SX1_k127_4059814_1	1297865.APJD01000004_gene5389	7.39e-216	670.0	COG0400@1|root,COG0400@2|Bacteria,1P51S@1224|Proteobacteria,2TT0Y@28211|Alphaproteobacteria,3JU1C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PFAM phospholipase Carboxylesterase	-	-	-	ko:K06999	-	-	-	-	ko00000	-	-	-	Abhydrolase_2
SX1_k127_4059814_2	1297865.APJD01000004_gene5388	3.377e-212	660.0	COG0265@1|root,COG0265@2|Bacteria,1MURF@1224|Proteobacteria,2TUVW@28211|Alphaproteobacteria,3JT2K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Domain present in PSD-95, Dlg, and ZO-1/2.	MA20_20705	-	-	-	-	-	-	-	-	-	-	-	PDZ_2,Trypsin_2
SX1_k127_4059814_0	1297865.APJD01000004_gene5387	0.0	1058.0	COG0318@1|root,COG0318@2|Bacteria,1MUIC@1224|Proteobacteria,2TUFX@28211|Alphaproteobacteria,3JSU3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	MA20_40105	-	6.2.1.7	ko:K15868	ko00121,map00121	-	-	-	ko00000,ko00001,ko01000	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_4059814_5	1297865.APJD01000004_gene5386	1.601e-62	215.0	29CEH@1|root,316CX@2|Bacteria,1RK1P@1224|Proteobacteria,2UAFP@28211|Alphaproteobacteria,3JZN2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PilZ domain	-	-	-	-	-	-	-	-	-	-	-	-	PilZ
SX1_k127_4059814_6	1297865.APJD01000004_gene5385	2.807e-41	154.0	29G1G@1|root,302Z9@2|Bacteria,1P7JP@1224|Proteobacteria,2UX1U@28211|Alphaproteobacteria,3K56V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4059814_3	1297865.APJD01000004_gene5384	1.202e-189	592.0	COG0583@1|root,COG0583@2|Bacteria,1MU2E@1224|Proteobacteria,2TUNU@28211|Alphaproteobacteria,3JUG2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_4059814_4	1297865.APJD01000004_gene5383	1.003e-102	335.0	COG0667@1|root,COG0667@2|Bacteria,1MVEH@1224|Proteobacteria,2TRHS@28211|Alphaproteobacteria,3JVP4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldo keto reductase	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
SX1_k127_4062978_1	1297865.APJD01000052_gene1211	9.403e-216	669.0	COG0451@1|root,COG0451@2|Bacteria,1MXKV@1224|Proteobacteria,2TRM0@28211|Alphaproteobacteria,3JR0I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	GM	epimerase dehydratase	-	-	4.1.1.35	ko:K08678	ko00520,ko01100,map00520,map01100	M00361	R01384	RC00508	ko00000,ko00001,ko00002,ko01000	-	-	-	GDP_Man_Dehyd
SX1_k127_4062978_4	1297865.APJD01000052_gene1212	4.99e-114	368.0	2DKUH@1|root,30CV1@2|Bacteria,1RAFH@1224|Proteobacteria,2U5U4@28211|Alphaproteobacteria,3JYF9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Type II secretion system (T2SS), protein M subtype b	-	-	-	ko:K02462	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	T2SSM_b
SX1_k127_4062978_0	1297865.APJD01000052_gene1213	3.71e-216	674.0	COG3166@1|root,COG3166@2|Bacteria,1RJTG@1224|Proteobacteria,2U14U@28211|Alphaproteobacteria,3JX7Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	Fimbrial assembly protein (PilN)	-	-	-	-	-	-	-	-	-	-	-	-	PilN
SX1_k127_4062978_2	1297865.APJD01000052_gene1214	2.164e-159	507.0	COG3156@1|root,COG3156@2|Bacteria,1R9D9@1224|Proteobacteria,2TV4P@28211|Alphaproteobacteria,3JXH9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Type II secretion system (T2SS), protein K	-	-	-	ko:K02460	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	T2SSK
SX1_k127_4062978_3	1297865.APJD01000052_gene1215	4.479e-146	464.0	COG4967@1|root,COG4967@2|Bacteria,1RCF1@1224|Proteobacteria,2U6KI@28211|Alphaproteobacteria	28211|Alphaproteobacteria	NU	type IV pilus modification protein PilV	-	-	-	-	-	-	-	-	-	-	-	-	N_methyl
SX1_k127_4062978_5	1297865.APJD01000052_gene1216	6.214e-93	306.0	2ENGV@1|root,33G4C@2|Bacteria,1MYRN@1224|Proteobacteria,2UAMZ@28211|Alphaproteobacteria,3JZY7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Prokaryotic N-terminal methylation motif	-	-	-	-	-	-	-	-	-	-	-	-	N_methyl
SX1_k127_4062978_7	1297865.APJD01000052_gene1218	1.441e-21	94.0	COG1459@1|root,COG1459@2|Bacteria,1MV4U@1224|Proteobacteria,2TV76@28211|Alphaproteobacteria,3JXX4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	Type II secretion system (T2SS), protein F	-	-	-	ko:K02455,ko:K02653	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02035,ko02044	3.A.15,3.A.15.2	-	-	T2SSF
SX1_k127_4063399_5	1297865.APJD01000008_gene5583	5.578e-66	229.0	COG1838@1|root,COG1951@1|root,COG1838@2|Bacteria,COG1951@2|Bacteria,1MUV9@1224|Proteobacteria,2TT46@28211|Alphaproteobacteria,3JTYW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Catalyzes the reversible hydration of fumarate to (S)- malate	fumA	GO:0003674,GO:0003824,GO:0004333,GO:0005488,GO:0005515,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016860,GO:0016862,GO:0016999,GO:0017144,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0048037,GO:0050163,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072350	4.2.1.2	ko:K01676	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00173,M00374	R01082	RC00443	ko00000,ko00001,ko00002,ko01000	-	-	-	Fumerase,Fumerase_C
SX1_k127_4063399_7	1230476.C207_00741	3.707e-54	194.0	2DQ41@1|root,334MP@2|Bacteria,1QWJG@1224|Proteobacteria,2UFKB@28211|Alphaproteobacteria,3JZRC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Kazal type serine protease inhibitors	-	-	-	-	-	-	-	-	-	-	-	-	Kazal_1
SX1_k127_4063399_3	1230476.C207_00742	6.668e-92	304.0	2A99X@1|root,30YET@2|Bacteria,1RIIA@1224|Proteobacteria,2U3TD@28211|Alphaproteobacteria,3JWJN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_08600	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4063399_2	1297865.APJD01000008_gene5585	1.339e-99	324.0	COG3832@1|root,COG3832@2|Bacteria,1RC0V@1224|Proteobacteria,2TS70@28211|Alphaproteobacteria,3JYCH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
SX1_k127_4063399_6	1297865.APJD01000008_gene5586	7.202e-62	216.0	COG0640@1|root,COG0640@2|Bacteria,1RHUX@1224|Proteobacteria,2U9YE@28211|Alphaproteobacteria,3JYYJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, Arsenical Resistance Operon Repressor	MA20_09440	-	-	ko:K03892	-	-	-	-	ko00000,ko03000	-	-	-	HTH_20
SX1_k127_4063399_1	1297865.APJD01000008_gene5587	3.027e-142	454.0	COG2020@1|root,COG2020@2|Bacteria,1RDC4@1224|Proteobacteria,2TUXA@28211|Alphaproteobacteria,3JU1Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Isoprenylcysteine carboxyl methyltransferase (ICMT) family	-	-	-	-	-	-	-	-	-	-	-	-	PEMT
SX1_k127_4063399_4	1297865.APJD01000008_gene5588	4.772e-78	260.0	COG3791@1|root,COG3791@2|Bacteria,1RHWZ@1224|Proteobacteria,2UBRG@28211|Alphaproteobacteria,3JYQ1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Glutathione-dependent formaldehyde-activating enzyme	-	-	-	-	-	-	-	-	-	-	-	-	GFA
SX1_k127_4063399_0	1297865.APJD01000008_gene5589	2.211e-153	485.0	COG0625@1|root,COG0625@2|Bacteria,1N8XH@1224|Proteobacteria,2TTHQ@28211|Alphaproteobacteria,3JSV2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase	MA20_08585	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C_3
SX1_k127_4063399_8	172088.AUGA01000011_gene2670	1.583e-14	73.0	2EHXM@1|root,33BP4@2|Bacteria,1NGZB@1224|Proteobacteria,2U854@28211|Alphaproteobacteria,3JZCJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3606)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3606
SX1_k127_4068685_5	189753.AXAS01000002_gene5205	1.928e-20	94.0	COG0111@1|root,COG0111@2|Bacteria,1NU4B@1224|Proteobacteria,2TTQG@28211|Alphaproteobacteria,3JWQI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain	-	-	1.1.1.399,1.1.1.95	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R01513	RC00031	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh,2-Hacid_dh_C
SX1_k127_4068685_0	1297865.APJD01000006_gene4350	0.0	1062.0	COG1070@1|root,COG1070@2|Bacteria,1MW4A@1224|Proteobacteria,2TVIT@28211|Alphaproteobacteria,3K5ZA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Belongs to the FGGY kinase family	eryA	-	2.7.1.215	ko:K00862	-	-	R11536	RC00017	ko00000,ko01000	-	-	-	FGGY_C,FGGY_N
SX1_k127_4068685_1	1297865.APJD01000006_gene4349	1.346e-246	766.0	COG3842@1|root,COG3842@2|Bacteria,1QW8T@1224|Proteobacteria,2TWT9@28211|Alphaproteobacteria,3JS72@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TOBE domain	-	-	-	ko:K10112	ko02010,map02010	M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00491,M00602,M00605,M00606	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1	-	-	ABC_tran,TOBE_2
SX1_k127_4068685_3	1185652.USDA257_c12990	4.187e-95	323.0	COG3839@1|root,COG3839@2|Bacteria,1QY5X@1224|Proteobacteria,2TXHG@28211|Alphaproteobacteria,4BIXF@82115|Rhizobiaceae	28211|Alphaproteobacteria	G	ATPases associated with a variety of cellular activities	-	-	-	ko:K10112	ko02010,map02010	M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00491,M00602,M00605,M00606	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1	-	-	ABC_tran
SX1_k127_4068685_2	1297865.APJD01000006_gene4347	7.35e-173	545.0	COG0395@1|root,COG0395@2|Bacteria,1N0IZ@1224|Proteobacteria,2TZME@28211|Alphaproteobacteria,3JSAD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02026	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	BPD_transp_1
SX1_k127_4068685_4	1297865.APJD01000006_gene4346	2.989e-30	119.0	COG1175@1|root,COG1175@2|Bacteria,1PGBC@1224|Proteobacteria,2U1DG@28211|Alphaproteobacteria,3JUUX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02025	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	BPD_transp_1
SX1_k127_4074029_0	1297865.APJD01000003_gene6297	6.205e-188	591.0	COG0477@1|root,COG2814@2|Bacteria,1MX2P@1224|Proteobacteria,2TUAS@28211|Alphaproteobacteria,3JQNE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	MA20_40510	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_4074029_3	323097.Nham_3476	2.243e-06	56.0	COG5567@1|root,COG5567@2|Bacteria,1NEKY@1224|Proteobacteria,2UHV1@28211|Alphaproteobacteria,3K148@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Prokaryotic lipoprotein-attachment site	-	-	-	-	-	-	-	-	-	-	-	-	LPAM_2
SX1_k127_4074029_2	1297865.APJD01000003_gene6298	5.279e-73	245.0	28Q88@1|root,2ZCQY@2|Bacteria,1R9Z0@1224|Proteobacteria,2U8GP@28211|Alphaproteobacteria,3JZ6K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4074029_1	1297865.APJD01000003_gene6299	1.599e-179	563.0	COG0481@1|root,COG0481@2|Bacteria,1MVZA@1224|Proteobacteria,2TR3H@28211|Alphaproteobacteria,3JR8J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner	lepA	-	-	ko:K03596	ko05134,map05134	-	-	-	ko00000,ko00001	-	-	-	EFG_C,EFG_II,GTP_EFTU,GTP_EFTU_D2,LepA_C
SX1_k127_4085342_3	1297865.APJD01000007_gene1859	2.313e-34	131.0	COG4346@1|root,COG4346@2|Bacteria,1QHX0@1224|Proteobacteria,2TVG5@28211|Alphaproteobacteria,3JT74@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	C-terminal four TMM region of protein-O-mannosyltransferase	-	-	2.4.1.109	ko:K00728	ko00514,ko00515,ko01100,map00514,map00515,map01100	-	R04072,R07620,R11399	RC00005,RC00059,RC00397	ko00000,ko00001,ko01000,ko01003	-	GT39	-	PMT,PMT_2,PMT_4TMC
SX1_k127_4085342_1	1297865.APJD01000007_gene1860	2.952e-117	384.0	COG2885@1|root,COG2885@2|Bacteria,1R6QU@1224|Proteobacteria,2TTMS@28211|Alphaproteobacteria,3JQYH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	OmpA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA
SX1_k127_4085342_2	1297865.APJD01000007_gene1861	1.84e-47	171.0	2E5T0@1|root,330HC@2|Bacteria,1N7GC@1224|Proteobacteria,2UHV0@28211|Alphaproteobacteria,3K0RW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4085342_0	1297865.APJD01000007_gene1862	1.448e-256	792.0	COG3214@1|root,COG3214@2|Bacteria,1N40B@1224|Proteobacteria,2TT7U@28211|Alphaproteobacteria,3JRUK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Winged helix DNA-binding domain	-	-	-	ko:K09927	-	-	-	-	ko00000	-	-	-	HTH_42
SX1_k127_4091836_3	1297865.APJD01000047_gene4773	1.935e-121	390.0	COG4731@1|root,COG4731@2|Bacteria,1N19Y@1224|Proteobacteria,2TVR6@28211|Alphaproteobacteria,3JVZC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized protein conserved in bacteria (DUF2147)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2147
SX1_k127_4091836_0	1297865.APJD01000047_gene4772	0.0	1296.0	2A2JU@1|root,30QXU@2|Bacteria,1N7N4@1224|Proteobacteria,2TTU2@28211|Alphaproteobacteria,3JR2N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_08245	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4091836_2	1297865.APJD01000047_gene4771	3.418e-229	710.0	COG0392@1|root,COG0392@2|Bacteria,1MXH9@1224|Proteobacteria,2TUMC@28211|Alphaproteobacteria,3JSC9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	integral membrane protein	MA20_08250	-	2.3.2.3	ko:K07027,ko:K14205	ko01503,ko02020,ko05150,map01503,map02020,map05150	M00726	-	-	ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	2.A.1.3.37,4.D.2	-	-	DUF2156,LPG_synthase_TM
SX1_k127_4091836_1	172088.AUGA01000011_gene2599	2.262e-262	814.0	COG0477@1|root,COG0477@2|Bacteria,1MWXZ@1224|Proteobacteria,2TT27@28211|Alphaproteobacteria,3JVI0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	-	-	-	ko:K08166	-	-	-	-	ko00000,ko02000	2.A.1.3.10	-	-	MFS_1
SX1_k127_4091836_4	1297865.APJD01000034_gene2372	9.813e-67	229.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,3JT1X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Bacterial signalling protein N terminal repeat	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,MHYT,PAS_7,PAS_8,dCache_1
SX1_k127_4096092_9	1230476.C207_00298	5.17e-27	109.0	COG3839@1|root,COG3839@2|Bacteria,1MU7W@1224|Proteobacteria,2TQNF@28211|Alphaproteobacteria,3JR55@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ATPases associated with a variety of cellular activities	MA20_44790	-	-	ko:K17325	ko02010,map02010	M00607	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.35	-	-	ABC_tran,TOBE_2
SX1_k127_4096092_2	1297865.APJD01000007_gene1885	1.817e-232	720.0	COG3842@1|root,COG3842@2|Bacteria,1QU06@1224|Proteobacteria,2TWIE@28211|Alphaproteobacteria,3JVWQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ATPases associated with a variety of cellular activities	MA20_44795	-	-	ko:K17324	ko02010,map02010	M00607	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.35	-	-	ABC_tran,TOBE,TOBE_2
SX1_k127_4096092_0	1230476.C207_00296	0.0	1007.0	COG0578@1|root,COG0578@2|Bacteria,1MUMY@1224|Proteobacteria,2TU11@28211|Alphaproteobacteria,3JS8Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family	glpD	-	1.1.5.3	ko:K00111	ko00564,ko01110,map00564,map01110	-	R00848	RC00029	ko00000,ko00001,ko01000	-	-	-	DAO,DAO_C
SX1_k127_4096092_8	1122214.AQWH01000032_gene3045	9.486e-40	152.0	COG0251@1|root,COG0251@2|Bacteria,1RHJH@1224|Proteobacteria,2U9RT@28211|Alphaproteobacteria	28211|Alphaproteobacteria	J	endoribonuclease L-PSP	-	-	-	-	-	-	-	-	-	-	-	-	Ribonuc_L-PSP,YjgF_endoribonc
SX1_k127_4096092_1	1297865.APJD01000007_gene1883	4.108e-260	805.0	COG0436@1|root,COG0436@2|Bacteria,1MUTC@1224|Proteobacteria,2U12Z@28211|Alphaproteobacteria,3JUWJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Aminotransferase class I and II	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_1_2
SX1_k127_4096092_3	1297865.APJD01000007_gene1882	1.365e-210	658.0	COG1171@1|root,COG1171@2|Bacteria,1MVWJ@1224|Proteobacteria,2TQN9@28211|Alphaproteobacteria,3K2G5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Pyridoxal-phosphate dependent enzyme	-	-	4.3.1.19	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	M00570	R00220,R00996	RC00418,RC02600	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
SX1_k127_4096092_4	1297865.APJD01000007_gene1881	1.356e-164	531.0	COG1126@1|root,COG1126@2|Bacteria,1MU9Q@1224|Proteobacteria,2TQX2@28211|Alphaproteobacteria,3K2Z6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ATPases associated with a variety of cellular activities	glnQ	-	3.6.3.21	ko:K02028,ko:K10004	ko02010,ko02020,map02010,map02020	M00230,M00236	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.3,3.A.1.3.19,3.A.1.3.4	-	-	ABC_tran
SX1_k127_4096092_6	1297865.APJD01000007_gene1880	8.785e-127	409.0	COG0765@1|root,COG0765@2|Bacteria,1MV3I@1224|Proteobacteria,2TQZ7@28211|Alphaproteobacteria,3JQXV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Binding-protein-dependent transport system inner membrane component	gltK	-	-	ko:K02029,ko:K10002	ko02010,ko02020,map02010,map02020	M00230,M00236	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3,3.A.1.3.19,3.A.1.3.4	-	-	BPD_transp_1
SX1_k127_4096092_5	1297865.APJD01000007_gene1879	4.603e-128	411.0	COG0765@1|root,COG0765@2|Bacteria,1MUVX@1224|Proteobacteria,2TRAT@28211|Alphaproteobacteria,3JVGT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K10003	ko02010,ko02020,map02010,map02020	M00230	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3.19,3.A.1.3.4	-	-	BPD_transp_1
SX1_k127_4096092_7	1297865.APJD01000007_gene1878	6.2e-56	195.0	COG0834@1|root,COG0834@2|Bacteria,1MV5D@1224|Proteobacteria,2TTXX@28211|Alphaproteobacteria,3JZNX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	ET	Bacterial periplasmic substrate-binding proteins	gltI	-	-	ko:K02030,ko:K10001	ko02010,ko02020,map02010,map02020	M00230,M00236	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3,3.A.1.3.19,3.A.1.3.4	-	-	SBP_bac_3
SX1_k127_4097787_9	1297865.APJD01000014_gene605	1.056e-197	616.0	COG0436@1|root,COG0436@2|Bacteria,1MW0Z@1224|Proteobacteria,2TTGJ@28211|Alphaproteobacteria,3JT9Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Cys/Met metabolism PLP-dependent enzyme	MA20_26420	-	-	-	-	-	-	-	-	-	-	-	Aminotran_1_2
SX1_k127_4097787_6	1297865.APJD01000014_gene604	1.575e-244	755.0	COG0687@1|root,COG0687@2|Bacteria,1MUYW@1224|Proteobacteria,2TSUZ@28211|Alphaproteobacteria,3JUJ4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Required for the activity of the bacterial periplasmic transport system of putrescine	potF	-	-	ko:K11073	ko02010,map02010	M00300	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.11.2	-	-	SBP_bac_6,SBP_bac_8
SX1_k127_4097787_8	1297865.APJD01000014_gene603	3.644e-207	644.0	COG1560@1|root,COG1560@2|Bacteria,1MVNI@1224|Proteobacteria,2TS2H@28211|Alphaproteobacteria,3JUSD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	lipid A biosynthesis	msbB	-	2.3.1.241	ko:K02517	ko00540,ko01100,map00540,map01100	M00060	R05146	RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Lip_A_acyltrans
SX1_k127_4097787_3	1230476.C207_06473	7.557e-266	820.0	COG0304@1|root,COG0304@2|Bacteria,1PVH9@1224|Proteobacteria,2TSMB@28211|Alphaproteobacteria,3JR29@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Belongs to the beta-ketoacyl-ACP synthases family	fabF3	-	2.3.1.179	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Ketoacyl-synt_C,ketoacyl-synt
SX1_k127_4097787_5	1297865.APJD01000014_gene601	5.589e-252	778.0	COG0304@1|root,COG0304@2|Bacteria,1MXZ7@1224|Proteobacteria,2TVEB@28211|Alphaproteobacteria,3JQQT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Beta-ketoacyl synthase, N-terminal domain	fabF2	-	2.3.1.179	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ketoacyl-synt
SX1_k127_4097787_16	709797.CSIRO_2478	5.503e-63	219.0	COG0764@1|root,COG0764@2|Bacteria,1RJND@1224|Proteobacteria,2UA4J@28211|Alphaproteobacteria,3JYDB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	FabA-like domain	-	-	4.2.1.59	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04428,R04535,R04537,R04544,R04568,R04954,R04965,R07764,R10117,R10121	RC00831,RC01095	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	FabA
SX1_k127_4097787_18	172088.AUGA01000003_gene5593	6.072e-58	203.0	COG0236@1|root,COG0236@2|Bacteria,1RI81@1224|Proteobacteria,2U9I5@28211|Alphaproteobacteria,3JZEG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Phosphopantetheine attachment site	acpXL	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	-	-	-	-	-	-	-	-	-	-	PP-binding
SX1_k127_4097787_15	1297865.APJD01000014_gene598	1.689e-64	222.0	2A87P@1|root,30X8R@2|Bacteria,1RFTN@1224|Proteobacteria,2U7BA@28211|Alphaproteobacteria,3JYXG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4097787_10	1297865.APJD01000014_gene597	6.018e-185	579.0	COG0395@1|root,COG0395@2|Bacteria,1REG1@1224|Proteobacteria,2U2QS@28211|Alphaproteobacteria,3JV66@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Inward rectifier potassium channel	-	-	-	ko:K08715	-	-	-	-	ko00000,ko02000	1.A.2.2	-	-	IRK
SX1_k127_4097787_11	1297865.APJD01000014_gene596	1.173e-140	447.0	COG4318@1|root,COG4318@2|Bacteria,1MVIY@1224|Proteobacteria,2TSB0@28211|Alphaproteobacteria,3JT1M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative ParB-like nuclease	-	-	-	-	-	-	-	-	-	-	-	-	ParBc_2
SX1_k127_4097787_17	1304878.AUGD01000002_gene2172	1.488e-62	221.0	COG1285@1|root,COG1285@2|Bacteria,1MURJ@1224|Proteobacteria,2U5UM@28211|Alphaproteobacteria,3JY8F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	MgtC family	-	-	-	ko:K07507	-	-	-	-	ko00000,ko02000	9.B.20	-	-	MgtC
SX1_k127_4097787_12	1297865.APJD01000014_gene594	2.611e-118	381.0	COG2128@1|root,COG2128@2|Bacteria,1MUDM@1224|Proteobacteria,2TTY5@28211|Alphaproteobacteria,3JSMD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	MA20_26500	-	-	-	-	-	-	-	-	-	-	-	CMD
SX1_k127_4097787_1	1230476.C207_06464	0.0	1130.0	COG0433@1|root,COG0433@2|Bacteria,1MUSH@1224|Proteobacteria,2TUN9@28211|Alphaproteobacteria,3JTFJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function DUF87	MA20_26515	-	-	ko:K06915	-	-	-	-	ko00000	-	-	-	DUF853,DUF87
SX1_k127_4097787_0	1297865.APJD01000014_gene592	0.0	1195.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,3JUXK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Putative diguanylate phosphodiesterase	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,MHYT,PAS_7,PAS_8,dCache_1
SX1_k127_4097787_21	1297865.APJD01000014_gene591	3.061e-28	114.0	2ADPG@1|root,313EI@2|Bacteria,1NGHE@1224|Proteobacteria,2UMRF@28211|Alphaproteobacteria,3K1S1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4097787_7	1297865.APJD01000014_gene590	8.931e-220	682.0	COG0346@1|root,COG0346@2|Bacteria,1MUWY@1224|Proteobacteria,2TTMJ@28211|Alphaproteobacteria,3JSUU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	xylE	-	1.13.11.2	ko:K00446	ko00361,ko00362,ko00622,ko00643,ko01100,ko01120,ko01220,map00361,map00362,map00622,map00643,map01100,map01120,map01220	M00569	R00816,R04089,R05295,R05404,R05406,R07795	RC00387,RC00643,RC01075,RC01364,RC01914	br01602,ko00000,ko00001,ko00002,ko01000	-	-	-	Glyoxalase
SX1_k127_4097787_14	1297865.APJD01000014_gene589	1.379e-96	319.0	COG5649@1|root,COG5649@2|Bacteria,1RDDG@1224|Proteobacteria,2U73S@28211|Alphaproteobacteria,3JY9D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DU1801)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1801
SX1_k127_4097787_4	1230476.C207_06459	2.895e-254	786.0	COG2041@1|root,COG2041@2|Bacteria,1MX9E@1224|Proteobacteria,2TRK0@28211|Alphaproteobacteria,3JRFB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Mo-co oxidoreductase dimerisation domain	-	-	-	ko:K17225	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	-	-	-	Mo-co_dimer,Oxidored_molyb,TAT_signal
SX1_k127_4097787_13	1297865.APJD01000014_gene587	7.181e-107	349.0	COG3258@1|root,COG3258@2|Bacteria,1QTYW@1224|Proteobacteria,2TWPT@28211|Alphaproteobacteria,3JVV3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K08738	ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	3.D.4.6	-	-	Cytochrome_CBB3
SX1_k127_4097787_19	1297865.APJD01000014_gene586	1.751e-45	168.0	2A8U7@1|root,30XXF@2|Bacteria,1RHAI@1224|Proteobacteria,2U9BZ@28211|Alphaproteobacteria,3JZJQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	BA14K-like protein	-	-	-	-	-	-	-	-	-	-	-	-	BA14K
SX1_k127_4097787_2	1297865.APJD01000014_gene585	9.158e-317	972.0	COG0531@1|root,COG0531@2|Bacteria,1MXNJ@1224|Proteobacteria,2TRNX@28211|Alphaproteobacteria,3JWKN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Amino acid permease	-	-	-	ko:K03294	-	-	-	-	ko00000	2.A.3.2	-	-	AA_permease_2,AA_permease_C
SX1_k127_4097787_20	1297865.APJD01000014_gene584	7.551e-31	123.0	COG0405@1|root,COG0405@2|Bacteria,1MUV6@1224|Proteobacteria,2TR49@28211|Alphaproteobacteria,3JRE0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Gamma-glutamyltranspeptidase	ggt	GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006082,GO:0006508,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0019538,GO:0019752,GO:0030288,GO:0030313,GO:0031975,GO:0034722,GO:0036374,GO:0042597,GO:0043094,GO:0043102,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0070011,GO:0071704,GO:0097264,GO:0140096,GO:1901564,GO:1901566,GO:1901576	2.3.2.2,3.4.19.13	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	-	R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935	RC00064,RC00090,RC00096	ko00000,ko00001,ko01000,ko01002	-	-	-	G_glu_transpept
SX1_k127_4098699_0	1230476.C207_05550	0.0	1226.0	COG0173@1|root,COG0173@2|Bacteria,1MUXB@1224|Proteobacteria,2TR9U@28211|Alphaproteobacteria,3JTEV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)	aspS	-	6.1.1.12	ko:K01876	ko00970,map00970	M00359,M00360	R05577	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	GAD,tRNA-synt_2,tRNA_anti-codon
SX1_k127_4098699_1	1297865.APJD01000010_gene5094	9.313e-321	986.0	COG0397@1|root,COG0397@2|Bacteria,1MVK3@1224|Proteobacteria,2TT84@28211|Alphaproteobacteria,3JTYR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the UPF0061 (SELO) family	MA20_28420	-	-	ko:K08997	-	-	-	-	ko00000	-	-	-	UPF0061
SX1_k127_4098699_10	1297865.APJD01000010_gene5093	1.489e-100	332.0	COG0604@1|root,COG0604@2|Bacteria,1MWBD@1224|Proteobacteria,2TVNB@28211|Alphaproteobacteria,3JUWB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Zinc-binding dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_zinc_N,ADH_zinc_N_2
SX1_k127_4098699_11	1297865.APJD01000010_gene5091	3.911e-88	290.0	COG0346@1|root,COG0346@2|Bacteria,1RD0N@1224|Proteobacteria,2U7D1@28211|Alphaproteobacteria,3JYZR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
SX1_k127_4098699_2	1297865.APJD01000010_gene5090	7.485e-277	852.0	COG0471@1|root,COG0471@2|Bacteria,1N58G@1224|Proteobacteria,2TU92@28211|Alphaproteobacteria,3K3MM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Sodium:sulfate symporter transmembrane region	-	-	-	-	-	-	-	-	-	-	-	-	Na_sulph_symp
SX1_k127_4098699_8	196490.AUEZ01000007_gene5188	7.505e-152	484.0	COG0583@1|root,COG0583@2|Bacteria,1MXRP@1224|Proteobacteria,2TRVK@28211|Alphaproteobacteria,3JXGG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_4098699_6	1297865.APJD01000010_gene5088	4.372e-188	589.0	COG0679@1|root,COG0679@2|Bacteria,1PINE@1224|Proteobacteria,2TUJR@28211|Alphaproteobacteria,3JUID@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Membrane transport protein	-	-	-	ko:K07088	-	-	-	-	ko00000	-	-	-	Mem_trans
SX1_k127_4098699_3	1297865.APJD01000010_gene5087	1.624e-251	778.0	COG2059@1|root,COG2059@2|Bacteria,1MUBW@1224|Proteobacteria,2TRXF@28211|Alphaproteobacteria,3JSVF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TIGRFAM chromate transporter, chromate ion transporter (CHR) family	chrA	-	-	ko:K07240	-	-	-	-	ko00000,ko02000	2.A.51.1	-	-	Chromate_transp
SX1_k127_4098699_5	1297865.APJD01000010_gene5086	2.161e-243	754.0	COG1835@1|root,COG1835@2|Bacteria,1RDQ4@1224|Proteobacteria,2TUH3@28211|Alphaproteobacteria,3JW57@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
SX1_k127_4098699_4	1297865.APJD01000010_gene5085	2.864e-248	769.0	COG0683@1|root,COG0683@2|Bacteria,1R7SA@1224|Proteobacteria,2TVB2@28211|Alphaproteobacteria,3JVD7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_4098699_9	1297865.APJD01000010_gene5084	2.983e-116	373.0	COG0346@1|root,COG0346@2|Bacteria,1P5FR@1224|Proteobacteria,2TVCC@28211|Alphaproteobacteria,3JSK6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	MA20_35815	-	1.13.11.25	ko:K16049	ko00984,ko01100,ko01120,ko01220,map00984,map01100,map01120,map01220	-	R04597	RC01610	ko00000,ko00001,ko01000	-	-	-	Glyoxalase
SX1_k127_4099998_5	1297865.APJD01000019_gene3152	4.319e-05	48.0	COG3644@1|root,COG3644@2|Bacteria,1RK12@1224|Proteobacteria,2U9IH@28211|Alphaproteobacteria,3JU7P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized protein conserved in bacteria (DUF2239)	-	-	-	ko:K09965	-	-	-	-	ko00000	-	-	-	DUF2239
SX1_k127_4099998_2	1297865.APJD01000019_gene3153	1.947e-142	455.0	COG0625@1|root,COG0625@2|Bacteria,1MXHH@1224|Proteobacteria,2TVGY@28211|Alphaproteobacteria,3JV1Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Belongs to the GST superfamily	MA20_25055	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_2,GST_C_3,GST_N
SX1_k127_4099998_3	1297865.APJD01000019_gene3154	7.664e-88	290.0	COG5470@1|root,COG5470@2|Bacteria,1MWI7@1224|Proteobacteria,2U0S6@28211|Alphaproteobacteria,3JYCC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF1330)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1330
SX1_k127_4099998_4	1297865.APJD01000019_gene3155	9.187e-66	225.0	COG3860@1|root,COG3860@2|Bacteria,1N8HB@1224|Proteobacteria,2UGZ1@28211|Alphaproteobacteria,3JZJI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4099998_0	1297865.APJD01000019_gene3156	1.585e-183	576.0	COG1028@1|root,COG1028@2|Bacteria,1MUSQ@1224|Proteobacteria,2TTJC@28211|Alphaproteobacteria,3JV7F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	ko:K13775	ko00281,map00281	-	R08087,R08096,R10125,R10126	RC00080,RC00087	ko00000,ko00001	-	-	-	adh_short,adh_short_C2
SX1_k127_4099998_1	1297865.APJD01000019_gene3157	7.428e-182	569.0	COG0477@1|root,COG2814@2|Bacteria,1MWKH@1224|Proteobacteria,2U0GU@28211|Alphaproteobacteria,3JR5H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	MA20_25060	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
SX1_k127_4102627_8	1297865.APJD01000075_gene2642	8.953e-11	62.0	COG2826@1|root,COG2826@2|Bacteria,1PP49@1224|Proteobacteria,2TRVA@28211|Alphaproteobacteria,3JZ7D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Integrase core domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_38,rve
SX1_k127_4102627_0	1297865.APJD01000049_gene5535	3.392e-200	625.0	COG0667@1|root,COG0667@2|Bacteria,1MV2Y@1224|Proteobacteria,2TS02@28211|Alphaproteobacteria,3JRPI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldo/keto reductase family	-	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
SX1_k127_4102627_3	1297865.APJD01000049_gene5534	2.18e-100	328.0	COG0454@1|root,COG0454@2|Bacteria,1QU5Y@1224|Proteobacteria,2TW13@28211|Alphaproteobacteria,3K6QQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
SX1_k127_4102627_1	1297865.APJD01000049_gene5533	1.295e-165	523.0	COG2199@1|root,COG3706@2|Bacteria,1Q8X8@1224|Proteobacteria,2TTKT@28211|Alphaproteobacteria,3JTED@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	PAS fold	-	-	-	-	-	-	-	-	-	-	-	-	DUF4118,PAS_7
SX1_k127_4102627_4	1297865.APJD01000049_gene5532	3.513e-73	249.0	COG3169@1|root,COG3169@2|Bacteria,1RHBQ@1224|Proteobacteria,2U9M1@28211|Alphaproteobacteria,3JZ36@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative member of DMT superfamily (DUF486)	-	-	-	ko:K09922	-	-	-	-	ko00000	-	-	-	DMT_6
SX1_k127_4102627_7	1297865.APJD01000049_gene5531	6.426e-22	97.0	29FDN@1|root,302BB@2|Bacteria,1NCGZ@1224|Proteobacteria,2UIVU@28211|Alphaproteobacteria,3K135@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4102627_6	1230476.C207_06116	2.238e-22	96.0	2ASG9@1|root,31HWE@2|Bacteria,1NFKA@1224|Proteobacteria,2UFRC@28211|Alphaproteobacteria,3K1D1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4102627_2	1297865.APJD01000049_gene5529	5.599e-144	456.0	COG0625@1|root,COG0625@2|Bacteria,1REDI@1224|Proteobacteria,2TR9W@28211|Alphaproteobacteria,3JRNA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Belongs to the GST superfamily	MA20_05235	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_N,GST_N_3
SX1_k127_4102627_5	1380355.JNIJ01000015_gene5960	8.883e-59	205.0	COG0436@1|root,COG0436@2|Bacteria,1MW0Z@1224|Proteobacteria,2TRPK@28211|Alphaproteobacteria,3JTIB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	DegT/DnrJ/EryC1/StrS aminotransferase family	aatA	-	2.6.1.1	ko:K00812	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	-	R00355,R00694,R00734,R00896,R02433,R02619,R05052	RC00006	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
SX1_k127_4103710_13	1230476.C207_06807	1.756e-05	47.0	COG2826@1|root,COG2826@2|Bacteria,1PP49@1224|Proteobacteria,2TRVA@28211|Alphaproteobacteria,3JZ7D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Integrase core domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_38,rve
SX1_k127_4103710_1	1297865.APJD01000032_gene1619	5.166e-264	815.0	COG4102@1|root,COG4102@2|Bacteria,1MX4R@1224|Proteobacteria,2TSFB@28211|Alphaproteobacteria,3JRCB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1501)	MA20_05265	-	-	-	-	-	-	-	-	-	-	-	DUF1501
SX1_k127_4103710_0	1297865.APJD01000032_gene1620	0.0	1028.0	COG5267@1|root,COG5267@2|Bacteria,1MWJK@1224|Proteobacteria,2TSY7@28211|Alphaproteobacteria,3JT47@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1800)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1800
SX1_k127_4103710_11	1038859.AXAU01000023_gene904	3.366e-20	101.0	2AEKQ@1|root,305CB@2|Bacteria,1NN51@1224|Proteobacteria,2UN6N@28211|Alphaproteobacteria,3K27K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4103710_9	1297865.APJD01000032_gene1621	5.419e-134	432.0	COG0637@1|root,COG0637@2|Bacteria,1PUMZ@1224|Proteobacteria,2VEVZ@28211|Alphaproteobacteria,3K6DZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	HAD-hyrolase-like	-	-	-	-	-	-	-	-	-	-	-	-	HAD_2
SX1_k127_4103710_3	1230476.C207_06124	9.345e-208	653.0	COG1876@1|root,COG1876@2|Bacteria,1N6GV@1224|Proteobacteria,2TV98@28211|Alphaproteobacteria,3JRSY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	peptidase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4103710_8	1297865.APJD01000032_gene1623	2.488e-134	429.0	COG1309@1|root,COG1309@2|Bacteria,1MU8U@1224|Proteobacteria,2TTBT@28211|Alphaproteobacteria,3K6D8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_4103710_5	1297865.APJD01000032_gene1624	3.991e-161	509.0	COG1024@1|root,COG1024@2|Bacteria,1MXEN@1224|Proteobacteria,2TTIH@28211|Alphaproteobacteria,3JS74@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	-	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_4103710_6	1297865.APJD01000032_gene1625	1.697e-159	503.0	COG0625@1|root,COG0625@2|Bacteria,1MUN3@1224|Proteobacteria,2TTVR@28211|Alphaproteobacteria,3JU3S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Belongs to the GST superfamily	-	-	-	ko:K11209	-	-	-	-	ko00000,ko01000	-	-	-	GST_C,GST_N
SX1_k127_4103710_2	1297865.APJD01000032_gene1626	2.425e-244	755.0	COG1237@1|root,COG1237@2|Bacteria,1NK2I@1224|Proteobacteria,2TTSG@28211|Alphaproteobacteria,3JRZP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metallo-beta-lactamase superfamily	-	-	2.5.1.105	ko:K06897	ko00790,map00790	-	R10339	RC00121	ko00000,ko00001,ko01000	-	-	-	Lactamase_B
SX1_k127_4103710_7	1297865.APJD01000032_gene1627	2.816e-137	442.0	COG1999@1|root,COG1999@2|Bacteria,1RHJ8@1224|Proteobacteria,2U0Q3@28211|Alphaproteobacteria,3JT9K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SCO1/SenC	msp5	-	-	ko:K07152	-	-	-	-	ko00000,ko03029	-	-	-	SCO1-SenC
SX1_k127_4103710_10	1297865.APJD01000032_gene1628	4.125e-45	167.0	2EIDG@1|root,33C4V@2|Bacteria,1N0P4@1224|Proteobacteria,2UC9K@28211|Alphaproteobacteria,3K073@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4103710_4	1297865.APJD01000032_gene1629	1.122e-197	616.0	COG0583@1|root,COG0583@2|Bacteria,1NTDD@1224|Proteobacteria,2TTVQ@28211|Alphaproteobacteria,3JSI8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	MA20_05295	-	-	ko:K03566	ko02026,map02026	-	-	-	ko00000,ko00001,ko03000	-	-	-	HTH_1,LysR_substrate
SX1_k127_4107989_0	1297865.APJD01000009_gene2973	3.274e-256	791.0	COG0477@1|root,COG2814@2|Bacteria,1QTW0@1224|Proteobacteria,2TW8Y@28211|Alphaproteobacteria,3K6S4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
SX1_k127_4107989_1	1297865.APJD01000009_gene2972	8.053e-168	530.0	COG1414@1|root,COG1414@2|Bacteria,1NCG5@1224|Proteobacteria,2U1VD@28211|Alphaproteobacteria,3JVJH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix isocitrate lyase regulation	-	-	-	-	-	-	-	-	-	-	-	-	HTH_IclR,IclR
SX1_k127_4107989_2	1297865.APJD01000009_gene2971	5.237e-83	274.0	COG0723@1|root,COG0723@2|Bacteria,1RAA2@1224|Proteobacteria,2U3EX@28211|Alphaproteobacteria,3JXJJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis	-	-	1.10.2.2	ko:K00411	ko00190,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016	M00151,M00152	-	-	ko00000,ko00001,ko00002,ko01000	-	-	-	Rieske,UCR_Fe-S_N
SX1_k127_4130200_5	317655.Sala_1244	4.066e-14	71.0	COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,2TS1R@28211|Alphaproteobacteria,2JZW6@204457|Sphingomonadales	204457|Sphingomonadales	I	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation	-	-	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
SX1_k127_4130200_2	1297865.APJD01000006_gene4694	2.683e-160	506.0	COG1028@1|root,COG1028@2|Bacteria,1MUBQ@1224|Proteobacteria,2TRPN@28211|Alphaproteobacteria,3JU36@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short,adh_short_C2
SX1_k127_4130200_3	1297865.APJD01000006_gene4695	2.253e-157	498.0	COG1024@1|root,COG1024@2|Bacteria,1MWZC@1224|Proteobacteria,2TRIH@28211|Alphaproteobacteria,3JWYR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	-	-	4.2.1.17	ko:K01692	ko00071,ko00280,ko00281,ko00310,ko00360,ko00362,ko00380,ko00410,ko00627,ko00640,ko00650,ko00903,ko00930,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00310,map00360,map00362,map00380,map00410,map00627,map00640,map00650,map00903,map00930,map01100,map01110,map01120,map01130,map01212	M00032,M00087	R03026,R03045,R04137,R04170,R04204,R04224,R04738,R04740,R04744,R04746,R04749,R05595,R06411,R06412,R06942,R08093	RC00831,RC00834,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
SX1_k127_4130200_1	1297865.APJD01000006_gene4696	4.561e-257	792.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TR15@28211|Alphaproteobacteria,3JVXU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_4130200_4	1297865.APJD01000006_gene4697	2.088e-139	444.0	COG1802@1|root,COG1802@2|Bacteria,1R4I2@1224|Proteobacteria,2U20Q@28211|Alphaproteobacteria,3JUJD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FCD	-	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SX1_k127_4130200_0	1297865.APJD01000006_gene4698	4.751e-304	933.0	COG0243@1|root,COG1018@1|root,COG0243@2|Bacteria,COG1018@2|Bacteria,1NR6J@1224|Proteobacteria,2VF1V@28211|Alphaproteobacteria,3JQQ6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Molydopterin dinucleotide binding domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_6,Fer2,Molybdop_Fe4S4,Molybdopterin,Molydop_binding,NAD_binding_1
SX1_k127_4132216_3	1297865.APJD01000030_gene1677	3.23e-169	531.0	COG1167@1|root,COG1167@2|Bacteria,1MVGT@1224|Proteobacteria,2TRK7@28211|Alphaproteobacteria,3JS7E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EK	Aminotransferase class I and II	-	-	-	ko:K00375	-	-	-	-	ko00000,ko03000	-	-	-	Aminotran_1_2,GntR
SX1_k127_4132216_4	1297865.APJD01000030_gene1676	1.858e-99	326.0	COG5317@1|root,COG5317@2|Bacteria,1RJIA@1224|Proteobacteria,2U9ID@28211|Alphaproteobacteria,3JT25@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1465)	MA20_18080	-	-	ko:K13592	ko04112,map04112	-	-	-	ko00000,ko00001	-	-	-	DUF1465
SX1_k127_4132216_7	1297865.APJD01000030_gene1675	1.492e-28	118.0	COG5509@1|root,COG5509@2|Bacteria,1NG8P@1224|Proteobacteria,2UJB2@28211|Alphaproteobacteria,3K0WS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1192)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1192
SX1_k127_4132216_1	1297865.APJD01000030_gene1674	0.0	1192.0	COG0143@1|root,COG0143@2|Bacteria,1MUBY@1224|Proteobacteria,2TQKA@28211|Alphaproteobacteria,3JXR4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation	metG	-	6.1.1.10	ko:K01874	ko00450,ko00970,map00450,map00970	M00359,M00360	R03659,R04773	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,tRNA-synt_1g
SX1_k127_4132216_2	1297865.APJD01000030_gene1673	1.871e-208	650.0	COG0604@1|root,COG0604@2|Bacteria,1MX8A@1224|Proteobacteria,2TR1J@28211|Alphaproteobacteria,3JQP7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NAD(P)H quinone oxidoreductase	MA20_18095	-	1.6.5.5	ko:K00344	-	-	-	-	ko00000,ko01000	-	-	-	ADH_N,ADH_zinc_N
SX1_k127_4132216_0	1297865.APJD01000030_gene1672	0.0	1877.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,3JT9B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Diguanylate cyclase	MA20_18100	-	3.1.4.52	ko:K13245	ko04112,map04112	-	R08991	RC00296	ko00000,ko00001,ko01000	-	-	-	7TMR-DISMED2,7TMR-DISM_7TM,EAL,GGDEF,PAS_3
SX1_k127_4132216_6	1297865.APJD01000030_gene1671	1.287e-55	194.0	2EGTC@1|root,33AJG@2|Bacteria,1N24R@1224|Proteobacteria,2UD22@28211|Alphaproteobacteria,3K0AG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4132216_5	1297865.APJD01000030_gene1670	3.145e-71	243.0	COG2199@1|root,COG3706@2|Bacteria,1MWHH@1224|Proteobacteria,2TSEP@28211|Alphaproteobacteria,3JVWF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Diguanylate cyclase	-	-	-	-	-	-	-	-	-	-	-	-	GGDEF,dCache_1
SX1_k127_4133373_1	1297865.APJD01000007_gene1846	2.114e-184	580.0	COG2267@1|root,COG2267@2|Bacteria,1MV7P@1224|Proteobacteria,2TSQ8@28211|Alphaproteobacteria,3JTGQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_4
SX1_k127_4133373_0	1297865.APJD01000007_gene1845	2.864e-248	769.0	COG2159@1|root,COG2159@2|Bacteria,1Q4XY@1224|Proteobacteria,2U25S@28211|Alphaproteobacteria,3JUPG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Amidohydrolase	-	-	-	ko:K07045	-	-	-	-	ko00000	-	-	-	Amidohydro_2
SX1_k127_4138497_1	1297865.APJD01000011_gene6616	6.147e-230	712.0	COG0154@1|root,COG0154@2|Bacteria,1MW3Z@1224|Proteobacteria,2TS56@28211|Alphaproteobacteria,3JRE9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the amidase family	-	-	3.5.1.4	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	-	R02540,R03096,R03180,R03909,R05551,R05590	RC00010,RC00100,RC00950,RC01025	ko00000,ko00001,ko01000	-	-	-	Amidase
SX1_k127_4138497_2	1297865.APJD01000011_gene6615	5.493e-73	248.0	2EKP5@1|root,33ECX@2|Bacteria,1RD05@1224|Proteobacteria,2U7D5@28211|Alphaproteobacteria,3JYTH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF4440)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440
SX1_k127_4138497_0	1297865.APJD01000011_gene6614	3.133e-234	725.0	COG1062@1|root,COG1062@2|Bacteria,1MUK4@1224|Proteobacteria,2TU1G@28211|Alphaproteobacteria,3JU3K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	alcohol dehydrogenase	adh	-	1.1.1.1,1.1.1.284	ko:K00001,ko:K00121	ko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204	-	R00623,R00754,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R06983,R07105,R08281,R08306,R08310	RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01715,RC01734,RC02273	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_zinc_N
SX1_k127_4139492_0	1297865.APJD01000009_gene2908	1.382e-195	616.0	COG0277@1|root,COG0277@2|Bacteria,1MVYV@1224|Proteobacteria,2TRA7@28211|Alphaproteobacteria,3JVXW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	FAD binding domain	glcE	-	-	ko:K11472	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	-	R00475	RC00042	ko00000,ko00001	-	-	-	FAD-oxidase_C,FAD_binding_4
SX1_k127_4139492_1	1297865.APJD01000009_gene2909	2.04e-145	461.0	COG0640@1|root,COG0640@2|Bacteria,1MWCW@1224|Proteobacteria,2TTA5@28211|Alphaproteobacteria,3JRUF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20
SX1_k127_4139492_3	172088.AUGA01000005_gene7825	2.797e-82	285.0	COG1359@1|root,COG1359@2|Bacteria,1RGK4@1224|Proteobacteria,2U81Q@28211|Alphaproteobacteria,3JZQ1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Antibiotic biosynthesis monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	ABM
SX1_k127_4139492_2	1297865.APJD01000009_gene2911	1.047e-104	340.0	COG1835@1|root,COG1835@2|Bacteria,1R8NZ@1224|Proteobacteria,2VF3I@28211|Alphaproteobacteria,3JTFB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
SX1_k127_4140297_7	317936.Nos7107_2446	8.385e-38	156.0	COG0265@1|root,COG0457@1|root,COG0265@2|Bacteria,COG0457@2|Bacteria,1G4J0@1117|Cyanobacteria,1HJ4A@1161|Nostocales	1117|Cyanobacteria	O	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_1,TPR_11,TPR_2,TPR_8,Trypsin_2
SX1_k127_4140297_2	1297865.APJD01000005_gene3708	2.661e-157	497.0	COG1028@1|root,COG1028@2|Bacteria,1R413@1224|Proteobacteria,2TW0W@28211|Alphaproteobacteria,3K6DW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_4140297_0	1297865.APJD01000005_gene3707	0.0	1077.0	COG0028@1|root,COG0028@2|Bacteria,1MX6Q@1224|Proteobacteria,2TS3K@28211|Alphaproteobacteria,3JX86@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Thiamine pyrophosphate enzyme, central domain	-	-	-	-	-	-	-	-	-	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
SX1_k127_4140297_1	1297865.APJD01000005_gene3706	4.219e-290	892.0	COG5434@1|root,COG5434@2|Bacteria,1N3IG@1224|Proteobacteria,2U0A8@28211|Alphaproteobacteria,3JSMH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Right handed beta helix region	MA20_15840	-	-	-	-	-	-	-	-	-	-	-	Beta_helix,Pectate_lyase_3
SX1_k127_4140297_5	1297865.APJD01000005_gene3705	7.998e-93	305.0	28VSQ@1|root,2ZHUH@2|Bacteria,1N2DW@1224|Proteobacteria,2UCYN@28211|Alphaproteobacteria,3K02K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4140297_3	1297865.APJD01000005_gene3704	8.323e-148	473.0	COG5662@1|root,COG5662@2|Bacteria,1QPSZ@1224|Proteobacteria,2TU7W@28211|Alphaproteobacteria,3JSW8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	AntiSigma factor	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4140297_4	1297865.APJD01000005_gene3703	9.42e-101	328.0	COG1595@1|root,COG1595@2|Bacteria,1MVPD@1224|Proteobacteria,2TVKC@28211|Alphaproteobacteria,3JTB7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Belongs to the sigma-70 factor family. ECF subfamily	MA20_15865	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4,Sigma70_r4_2
SX1_k127_4140297_8	883080.HMPREF9697_01274	1.159e-09	59.0	COG1595@1|root,COG1595@2|Bacteria,1MVPD@1224|Proteobacteria,2TVKC@28211|Alphaproteobacteria,3JTB7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Belongs to the sigma-70 factor family. ECF subfamily	MA20_15865	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4,Sigma70_r4_2
SX1_k127_4140297_6	1297865.APJD01000005_gene3702	8.798e-51	186.0	COG2199@1|root,COG3706@2|Bacteria,1RD8D@1224|Proteobacteria,2U0TB@28211|Alphaproteobacteria,3JRD3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	diguanylate cyclase	-	-	2.7.7.65	ko:K21019	ko02025,map02025	-	-	-	ko00000,ko00001,ko01000	-	-	-	GGDEF,MASE1,PAS,PAS_3,PAS_4
SX1_k127_4142785_4	1297865.APJD01000005_gene3827	2.872e-112	368.0	COG0604@1|root,COG0604@2|Bacteria,1MX8A@1224|Proteobacteria,2TVPQ@28211|Alphaproteobacteria,3JQNY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Zinc-binding dehydrogenase	MA20_15185	-	1.6.5.5	ko:K00344	-	-	-	-	ko00000,ko01000	-	-	-	ADH_N,ADH_zinc_N
SX1_k127_4142785_1	1297865.APJD01000005_gene3828	1.642e-218	680.0	COG4188@1|root,COG4188@2|Bacteria,1MW2N@1224|Proteobacteria,2U54T@28211|Alphaproteobacteria,3JSGT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	dienelactone hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	DLH,Hydrolase_4,PAF-AH_p_II,Peptidase_S9
SX1_k127_4142785_2	1297865.APJD01000005_gene3829	1.921e-210	656.0	COG2070@1|root,COG2070@2|Bacteria,1MWPC@1224|Proteobacteria,2TQRT@28211|Alphaproteobacteria,3JQS9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Nitronate monooxygenase	MA20_15180	-	1.13.12.16	ko:K00459	ko00910,map00910	-	R00025	RC02541,RC02759	ko00000,ko00001,ko01000	-	-	-	NMO
SX1_k127_4142785_5	1297865.APJD01000005_gene3830	1.711e-76	258.0	COG0517@1|root,COG0517@2|Bacteria,1RBR8@1224|Proteobacteria,2U5SN@28211|Alphaproteobacteria,3JYA9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain in cystathionine beta-synthase and other proteins.	MA20_15140	-	-	-	-	-	-	-	-	-	-	-	CBS
SX1_k127_4142785_0	1297865.APJD01000005_gene3831	9.451e-268	827.0	COG2271@1|root,COG2271@2|Bacteria,1QW8U@1224|Proteobacteria,2TWTA@28211|Alphaproteobacteria,3K6P3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	-	-	-	ko:K08177	-	-	-	-	ko00000,ko02000	2.A.1.11	-	-	MFS_1
SX1_k127_4142785_3	1297865.APJD01000005_gene3832	1.255e-149	473.0	COG2223@1|root,COG2223@2|Bacteria,1MVFQ@1224|Proteobacteria,2TR8Q@28211|Alphaproteobacteria,3JTQJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Major Facilitator Superfamily	MA20_15130	-	-	ko:K08177	-	-	-	-	ko00000,ko02000	2.A.1.11	-	-	MFS_1
SX1_k127_4164835_0	398525.KB900701_gene1838	0.0	1632.0	COG0643@1|root,COG2198@1|root,COG0643@2|Bacteria,COG2198@2|Bacteria,1MUAG@1224|Proteobacteria,2TSN2@28211|Alphaproteobacteria,3JTYN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Function of homologous gene experimentally demonstrated in an other organism	cheA	-	2.7.13.3	ko:K03407	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035	-	-	-	CheW,H-kinase_dim,HATPase_c,Hpt,Response_reg
SX1_k127_4164835_1	398525.KB900701_gene1839	3.766e-85	285.0	COG0835@1|root,COG0835@2|Bacteria,1RAH1@1224|Proteobacteria,2U59Y@28211|Alphaproteobacteria,3JYAB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NT	Two component signalling adaptor domain	cheW	-	-	ko:K03408	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	CheW
SX1_k127_4187260_1	1030157.AFMP01000028_gene2307	1.122e-256	795.0	COG0028@1|root,COG0028@2|Bacteria,1MU6U@1224|Proteobacteria,2TSB1@28211|Alphaproteobacteria,2K1IG@204457|Sphingomonadales	204457|Sphingomonadales	EH	Belongs to the TPP enzyme family	-	-	2.2.1.6	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R00006,R00014,R00226,R03050,R04672,R04673,R08648	RC00027,RC00106,RC01192,RC02744,RC02893	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
SX1_k127_4187260_0	1114964.L485_11565	7.696e-280	863.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TTJP@28211|Alphaproteobacteria,2K07M@204457|Sphingomonadales	204457|Sphingomonadales	C	belongs to the aldehyde dehydrogenase family	-	-	-	-	-	-	-	-	-	-	-	-	Aldedh
SX1_k127_4187260_2	1123267.JONN01000001_gene594	7.384e-86	293.0	COG0339@1|root,COG0339@2|Bacteria,1MU1K@1224|Proteobacteria,2TRCK@28211|Alphaproteobacteria,2JZUM@204457|Sphingomonadales	204457|Sphingomonadales	E	Peptidase family M3	dcp	-	3.4.15.5	ko:K01284	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M3
SX1_k127_4187584_2	1297865.APJD01000006_gene4548	4.945e-48	172.0	COG1309@1|root,COG1309@2|Bacteria,1MZ9E@1224|Proteobacteria,2U0MU@28211|Alphaproteobacteria,3JU2R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	AefR-like transcriptional repressor, C-terminal region	-	-	-	-	-	-	-	-	-	-	-	-	TetR_C_7,TetR_N
SX1_k127_4187584_1	1297865.APJD01000006_gene4549	1.604e-246	765.0	COG1566@1|root,COG1566@2|Bacteria,1MU7I@1224|Proteobacteria,2TS39@28211|Alphaproteobacteria,3JS7T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	HlyD membrane-fusion protein of T1SS	vceA	GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0042221,GO:0046677,GO:0050896,GO:0051716	-	ko:K03543	-	M00701	-	-	ko00000,ko00002,ko02000	8.A.1.1	-	-	Biotin_lipoyl_2,HlyD,HlyD_3,HlyD_D23
SX1_k127_4187584_0	1297865.APJD01000006_gene4550	0.0	1019.0	COG0477@1|root,COG0477@2|Bacteria,1RGPN@1224|Proteobacteria,2TQKW@28211|Alphaproteobacteria,3JUF3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	major facilitator superfamily	vceB	-	-	ko:K03446	-	M00701	-	-	ko00000,ko00002,ko02000	2.A.1.3	-	-	MFS_1
SX1_k127_4190277_4	1297865.APJD01000023_gene1140	6.633e-194	605.0	COG0484@1|root,COG0484@2|Bacteria,1MUZ4@1224|Proteobacteria,2TR01@28211|Alphaproteobacteria,3JU9R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	DnaJ C terminal domain	cbpA	-	-	-	-	-	-	-	-	-	-	-	DnaJ,DnaJ_C
SX1_k127_4190277_9	1297865.APJD01000023_gene1139	6.191e-54	191.0	COG0789@1|root,COG0789@2|Bacteria,1N831@1224|Proteobacteria,2UFMB@28211|Alphaproteobacteria,3JZYC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	MerR HTH family regulatory protein	-	-	-	ko:K18997	-	-	-	-	ko00000,ko03036	-	-	-	MerR_2
SX1_k127_4190277_13	224911.27352803	0.0003059	46.0	COG1173@1|root,COG1173@2|Bacteria,1MWP1@1224|Proteobacteria,2TSUG@28211|Alphaproteobacteria,3JR90@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Binding-protein-dependent transport system inner membrane component	MA20_13270	-	-	ko:K02034	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
SX1_k127_4190277_12	1297865.APJD01000023_gene1138	1.308e-39	147.0	2CI9C@1|root,2ZZAS@2|Bacteria,1N3W0@1224|Proteobacteria,2UBYI@28211|Alphaproteobacteria,3K0CD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4190277_11	1297865.APJD01000023_gene1137	9.58e-42	154.0	2ACQV@1|root,312BG@2|Bacteria,1N3C0@1224|Proteobacteria,2UECW@28211|Alphaproteobacteria,3K0C8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4190277_0	1297865.APJD01000023_gene1136	0.0	1074.0	COG1226@1|root,COG4651@1|root,COG1226@2|Bacteria,COG4651@2|Bacteria,1MV34@1224|Proteobacteria,2TRC5@28211|Alphaproteobacteria,3JVBN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family	ybaL	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K03455	-	-	-	-	ko00000	2.A.37	-	-	Na_H_Exchanger,TrkA_N
SX1_k127_4190277_8	1297865.APJD01000023_gene1135	9.863e-141	447.0	COG0637@1|root,COG0637@2|Bacteria,1NSPA@1224|Proteobacteria,2U0W3@28211|Alphaproteobacteria,3JURV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	HAD-hyrolase-like	-	-	-	-	-	-	-	-	-	-	-	-	HAD_2
SX1_k127_4190277_3	1297865.APJD01000023_gene1134	8.395e-198	617.0	COG2390@1|root,COG2390@2|Bacteria,1MWHQ@1224|Proteobacteria,2TSIT@28211|Alphaproteobacteria,3JSTK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Putative sugar-binding domain	smoC	-	-	-	-	-	-	-	-	-	-	-	MarR_2,Sugar-bind
SX1_k127_4190277_1	1230476.C207_06711	1.695e-282	869.0	COG1653@1|root,COG1653@2|Bacteria,1MUNZ@1224|Proteobacteria,2TSYG@28211|Alphaproteobacteria,3JQUX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Bacterial extracellular solute-binding protein	smoE	-	-	ko:K02027,ko:K10227	ko02010,map02010	M00200,M00207	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1,3.A.1.1.5	-	-	SBP_bac_1
SX1_k127_4190277_5	1297865.APJD01000023_gene1132	6.984e-176	555.0	COG1175@1|root,COG1175@2|Bacteria,1MVF1@1224|Proteobacteria,2TST1@28211|Alphaproteobacteria,3JU39@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Binding-protein-dependent transport system inner membrane component	smoF	-	-	ko:K10228	ko02010,map02010	M00200	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.5	-	-	BPD_transp_1
SX1_k127_4190277_6	1297865.APJD01000023_gene1131	1.318e-172	544.0	COG0395@1|root,COG0395@2|Bacteria,1MVVT@1224|Proteobacteria,2TQJF@28211|Alphaproteobacteria,3JSJ0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Binding-protein-dependent transport system inner membrane component	smoG	-	-	ko:K10229	ko02010,map02010	M00200	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.5	-	-	BPD_transp_1
SX1_k127_4190277_2	1297865.APJD01000023_gene1130	3.212e-218	677.0	COG3842@1|root,COG3842@2|Bacteria,1MU3I@1224|Proteobacteria,2TQQJ@28211|Alphaproteobacteria,3JT93@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TOBE domain	smoK	-	-	ko:K10111	ko02010,map02010	M00194,M00200,M00204,M00207,M00491	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.1	-	-	ABC_tran,TOBE,TOBE_2
SX1_k127_4190277_7	1297865.APJD01000023_gene1129	1.6e-163	515.0	COG1028@1|root,COG1028@2|Bacteria,1PGYI@1224|Proteobacteria,2VEUE@28211|Alphaproteobacteria,3JT4F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	MA20_14715	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_4190277_10	1297865.APJD01000023_gene1128	6.671e-50	178.0	COG1069@1|root,COG1069@2|Bacteria,1MY11@1224|Proteobacteria,2TTQN@28211|Alphaproteobacteria,3JU1K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	FGGY family of carbohydrate kinases, C-terminal domain	MA20_14710	-	2.7.1.47	ko:K00875	ko00040,ko01100,map00040,map01100	-	R01526	RC00002,RC00538	ko00000,ko00001,ko01000	-	-	-	FGGY_C,FGGY_N
SX1_k127_4190586_2	1297865.APJD01000023_gene1065	4.51e-67	228.0	COG1272@1|root,COG1272@2|Bacteria,1PGRH@1224|Proteobacteria,2TSXY@28211|Alphaproteobacteria,3JU4N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Haemolysin-III related	-	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K11068	-	-	-	-	ko00000,ko02042	-	-	-	HlyIII
SX1_k127_4190586_0	1297865.APJD01000023_gene1064	8.204e-172	539.0	COG4221@1|root,COG4221@2|Bacteria,1MW86@1224|Proteobacteria,2TSEM@28211|Alphaproteobacteria,3JSMN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Enoyl-(Acyl carrier protein) reductase	MA20_04540	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_4190586_1	1297865.APJD01000023_gene1063	1.494e-95	313.0	COG1309@1|root,COG1309@2|Bacteria,1MZEP@1224|Proteobacteria,2TQNA@28211|Alphaproteobacteria,3JU9M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_4193350_1	1297865.APJD01000003_gene6439	2.199e-148	472.0	COG0546@1|root,COG0546@2|Bacteria,1QUWZ@1224|Proteobacteria,2TWR6@28211|Alphaproteobacteria,3JX8U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Haloacid dehalogenase-like hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	HAD_2
SX1_k127_4193350_3	1297865.APJD01000003_gene6438	4.586e-127	409.0	COG5516@1|root,COG5516@2|Bacteria,1REGN@1224|Proteobacteria,2U1EY@28211|Alphaproteobacteria,3JVZX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative stress-induced transcription regulator	-	-	-	-	-	-	-	-	-	-	-	-	ABATE,zf-CGNR
SX1_k127_4193350_2	1297865.APJD01000003_gene6437	5.19e-141	451.0	COG1075@1|root,COG1075@2|Bacteria,1R8NM@1224|Proteobacteria,2U0Y0@28211|Alphaproteobacteria,3JVSN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
SX1_k127_4193350_0	1297865.APJD01000003_gene6436	6.872e-195	607.0	COG0596@1|root,COG0596@2|Bacteria,1MUSF@1224|Proteobacteria,2TSK5@28211|Alphaproteobacteria,3JRAN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
SX1_k127_4193350_5	1297865.APJD01000003_gene6435	4.04e-95	312.0	COG1942@1|root,COG1942@2|Bacteria,1RGXS@1224|Proteobacteria,2UACJ@28211|Alphaproteobacteria,3K0PF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative oxalocrotonate tautomerase enzyme	-	-	-	-	-	-	-	-	-	-	-	-	Tautomerase,Tautomerase_3
SX1_k127_4193350_4	1297865.APJD01000003_gene6434	1.723e-97	317.0	COG2133@1|root,COG2133@2|Bacteria,1MVK5@1224|Proteobacteria,2TRN9@28211|Alphaproteobacteria,3JRG3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Glucose / Sorbosone dehydrogenase	MA20_02000	-	-	-	-	-	-	-	-	-	-	-	GSDH
SX1_k127_4195713_0	1297865.APJD01000035_gene5479	4.49e-203	633.0	COG0715@1|root,COG0715@2|Bacteria,1MV9S@1224|Proteobacteria,2TU4J@28211|Alphaproteobacteria,3JSKG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ABC transporter, phosphonate, periplasmic substrate-binding protein	MA20_23330	-	-	ko:K15553	ko00920,ko02010,map00920,map02010	M00436	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.17.2	-	-	NMT1
SX1_k127_4195713_1	1297865.APJD01000035_gene5480	1.186e-173	546.0	COG0600@1|root,COG0600@2|Bacteria,1R5NP@1224|Proteobacteria,2VETS@28211|Alphaproteobacteria,3JSMJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Binding-protein-dependent transport system inner membrane component	MA20_23325	-	-	ko:K15554	ko00920,ko02010,map00920,map02010	M00436	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.17.2	-	-	BPD_transp_1
SX1_k127_4195713_2	1297865.APJD01000035_gene5481	2.684e-154	497.0	COG1116@1|root,COG1116@2|Bacteria,1MUDV@1224|Proteobacteria,2TRNE@28211|Alphaproteobacteria,3JR1K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ATPases associated with a variety of cellular activities	MA20_23320	-	-	ko:K15555	ko00920,ko02010,map00920,map02010	M00436	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.17.2	-	-	ABC_tran
SX1_k127_4219242_8	1297865.APJD01000021_gene3055	1.18e-10	74.0	COG0601@1|root,COG0601@2|Bacteria,1MU8Z@1224|Proteobacteria,2TQJC@28211|Alphaproteobacteria,3JSJW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K02033	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
SX1_k127_4219242_2	1297865.APJD01000021_gene3056	0.0	1096.0	COG0747@1|root,COG0747@2|Bacteria,1MUZH@1224|Proteobacteria,2TS14@28211|Alphaproteobacteria,3JQM3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Bacterial extracellular solute-binding proteins, family 5 Middle	-	-	-	ko:K02035	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	SBP_bac_5
SX1_k127_4219242_3	398525.KB900701_gene1863	5.984e-174	549.0	COG0662@1|root,COG2207@1|root,COG0662@2|Bacteria,COG2207@2|Bacteria,1P1FH@1224|Proteobacteria,2TRGB@28211|Alphaproteobacteria,3JXT3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,HTH_18
SX1_k127_4219242_4	1297865.APJD01000021_gene3058	2.337e-139	445.0	COG0664@1|root,COG0664@2|Bacteria,1MXID@1224|Proteobacteria,2TT42@28211|Alphaproteobacteria,3JTZ2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, crp family	MA20_39330	-	-	ko:K10914	ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111	-	-	-	ko00000,ko00001,ko03000	-	-	-	HTH_Crp_2,cNMP_binding
SX1_k127_4219242_1	1297865.APJD01000021_gene3059	0.0	1315.0	COG2982@1|root,COG2982@2|Bacteria,1NVUY@1224|Proteobacteria,2TRSN@28211|Alphaproteobacteria,3JV15@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	AsmA-like C-terminal region	-	-	-	ko:K07289	-	-	-	-	ko00000	-	-	-	AsmA,AsmA_2
SX1_k127_4219242_0	1297865.APJD01000021_gene3060	0.0	1568.0	COG2114@1|root,COG3850@1|root,COG2114@2|Bacteria,COG3850@2|Bacteria,1QW6N@1224|Proteobacteria,2TWQ3@28211|Alphaproteobacteria,3JU8D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	GAF,GAF_2,Guanylate_cyc,HAMP,dCache_1
SX1_k127_4219242_5	1230476.C207_03893	1.566e-38	144.0	COG1278@1|root,COG1278@2|Bacteria,1N6Q5@1224|Proteobacteria,2UF6W@28211|Alphaproteobacteria,3K04N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Cold shock protein domain	-	-	-	ko:K03704	-	-	-	-	ko00000,ko03000	-	-	-	CSD
SX1_k127_4219242_6	1297865.APJD01000021_gene3062	8.302e-37	140.0	2AGVZ@1|root,3174D@2|Bacteria,1NJ2N@1224|Proteobacteria,2UK1X@28211|Alphaproteobacteria,3K1UQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4232186_9	1297865.APJD01000039_gene1698	9.163e-152	479.0	COG1574@1|root,COG1574@2|Bacteria,1MWP2@1224|Proteobacteria,2TTRU@28211|Alphaproteobacteria,3K68D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_3
SX1_k127_4232186_4	1297865.APJD01000039_gene1699	3.608e-255	788.0	COG4645@1|root,COG4645@2|Bacteria,1PI9Q@1224|Proteobacteria,2U1C7@28211|Alphaproteobacteria,3JWHA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	OpgC protein	-	-	-	-	-	-	-	-	-	-	-	-	OpgC_C
SX1_k127_4232186_11	1297865.APJD01000039_gene1700	9.902e-130	416.0	COG1309@1|root,COG1309@2|Bacteria,1R9CY@1224|Proteobacteria,2U528@28211|Alphaproteobacteria,3JXSB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_C_4,TetR_N
SX1_k127_4232186_5	1297865.APJD01000039_gene1701	1.058e-253	782.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TQKE@28211|Alphaproteobacteria,3JVW0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	-	ko:K06446	ko00930,ko01100,ko01120,map00930,map01100,map01120	-	R06943	RC00052	ko00000,ko00001,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_4232186_0	1297865.APJD01000039_gene1702	0.0	1144.0	COG0318@1|root,COG0318@2|Bacteria,1MUMC@1224|Proteobacteria,2TR96@28211|Alphaproteobacteria,3K2C0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	-	-	6.2.1.48	ko:K02182	-	-	-	-	ko00000,ko01000	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_4232186_6	1297865.APJD01000039_gene1703	1.06e-206	650.0	COG0252@1|root,COG0252@2|Bacteria,1MWIR@1224|Proteobacteria,2U1B3@28211|Alphaproteobacteria,3JT6S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EJ	Asparaginase	ansB	-	3.5.1.1,3.5.1.38	ko:K01424,ko:K05597	ko00220,ko00250,ko00460,ko00471,ko01100,ko01110,ko02020,map00220,map00250,map00460,map00471,map01100,map01110,map02020	-	R00256,R00485,R01579	RC00010,RC02798	ko00000,ko00001,ko01000	-	-	-	Asparaginase
SX1_k127_4232186_2	1297865.APJD01000039_gene1704	5.367e-315	966.0	COG1070@1|root,COG1070@2|Bacteria,1MW4A@1224|Proteobacteria,2TR7P@28211|Alphaproteobacteria,3JRNR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	FGGY family of carbohydrate kinases, N-terminal domain	xylB	GO:0003674,GO:0003824,GO:0004856,GO:0005975,GO:0005996,GO:0005997,GO:0005998,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016052,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019321,GO:0019323,GO:0042732,GO:0042843,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0046365,GO:0046835,GO:0071704,GO:1901575	2.7.1.17	ko:K00854	ko00040,ko01100,map00040,map01100	M00014	R01639	RC00002,RC00538	ko00000,ko00001,ko00002,ko01000	-	-	-	FGGY_C,FGGY_N
SX1_k127_4232186_12	1297865.APJD01000039_gene1705	6.438e-93	311.0	COG0625@1|root,COG0625@2|Bacteria,1MY47@1224|Proteobacteria,2TVGA@28211|Alphaproteobacteria,3JR7D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, C-terminal domain	gst	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_2,GST_C_3,GST_N,GST_N_3
SX1_k127_4232186_1	1297865.APJD01000039_gene1706	0.0	1045.0	COG1129@1|root,COG1129@2|Bacteria,1MU22@1224|Proteobacteria,2TQJV@28211|Alphaproteobacteria,3JQYV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	ABC transporter	MA20_14260	-	3.6.3.17	ko:K10441	ko02010,map02010	M00212	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	ABC_tran
SX1_k127_4232186_8	1037409.BJ6T_64320	6.217e-177	560.0	COG4158@1|root,COG4158@2|Bacteria,1QTW4@1224|Proteobacteria,2TWS8@28211|Alphaproteobacteria,3JV3D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Branched-chain amino acid transport system / permease component	MA20_14255	-	-	ko:K10440	ko02010,map02010	M00212	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	BPD_transp_2
SX1_k127_4232186_7	1297865.APJD01000039_gene1708	1.684e-195	612.0	COG1879@1|root,COG1879@2|Bacteria,1NRXG@1224|Proteobacteria,2TT8F@28211|Alphaproteobacteria,3JU5A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Periplasmic binding proteins and sugar binding domain of LacI family	MA20_14250	-	-	ko:K10439	ko02010,ko02030,map02010,map02030	M00212	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	Peripla_BP_4
SX1_k127_4232186_10	1297865.APJD01000039_gene1709	4.956e-134	428.0	COG1309@1|root,COG1309@2|Bacteria,1N5IN@1224|Proteobacteria,2VEVX@28211|Alphaproteobacteria,3K6EZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_4232186_3	1297865.APJD01000039_gene1710	2.573e-302	927.0	COG4774@1|root,COG4774@2|Bacteria,1MV0X@1224|Proteobacteria,2TVX5@28211|Alphaproteobacteria,3K6QH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SX1_k127_4236556_1	1297865.APJD01000002_gene4152	0.0	1434.0	COG1014@1|root,COG4231@1|root,COG1014@2|Bacteria,COG4231@2|Bacteria,1MUKS@1224|Proteobacteria,2TSHH@28211|Alphaproteobacteria,3JSRZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Pyruvate ferredoxin/flavodoxin oxidoreductase	MA20_35585	-	1.2.7.8	ko:K04090	-	-	-	-	br01601,ko00000,ko01000	-	-	-	POR,TPP_enzyme_C
SX1_k127_4236556_6	1297865.APJD01000002_gene4151	4.247e-264	817.0	COG2010@1|root,COG2010@2|Bacteria,1MV6D@1224|Proteobacteria,2TT9U@28211|Alphaproteobacteria,3JR14@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome C oxidase, cbb3-type, subunit III	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C
SX1_k127_4236556_14	1297865.APJD01000002_gene4150	2.21e-131	422.0	COG2860@1|root,COG2860@2|Bacteria,1R9H8@1224|Proteobacteria,2VG96@28211|Alphaproteobacteria,3JSN8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	UPF0126 domain	-	-	-	-	-	-	-	-	-	-	-	-	UPF0126
SX1_k127_4236556_17	1297865.APJD01000002_gene4149	3.796e-83	276.0	2A7BM@1|root,30W8D@2|Bacteria,1RD93@1224|Proteobacteria,2U8R5@28211|Alphaproteobacteria,3JYY4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4236556_9	1297865.APJD01000002_gene4148	6.194e-183	573.0	COG2513@1|root,COG2513@2|Bacteria,1R3SD@1224|Proteobacteria,2TRRV@28211|Alphaproteobacteria,3JSI4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Phosphoenolpyruvate phosphomutase	MA20_35565	-	4.1.3.30	ko:K03417	ko00640,map00640	-	R00409	RC00286,RC00287	ko00000,ko00001,ko01000	-	-	-	PEP_mutase
SX1_k127_4236556_20	1297865.APJD01000002_gene4147	6.185e-68	234.0	COG2329@1|root,COG2329@2|Bacteria,1RGVV@1224|Proteobacteria,2U9A3@28211|Alphaproteobacteria,3JZ5R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Antibiotic biosynthesis monooxygenase	MA20_35560	-	-	-	-	-	-	-	-	-	-	-	ABM
SX1_k127_4236556_21	1297865.APJD01000002_gene4146	2.454e-61	213.0	COG5470@1|root,COG5470@2|Bacteria,1RIH6@1224|Proteobacteria,2U9VZ@28211|Alphaproteobacteria,3JZIU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	NIPSNAP	MA20_35555	-	-	-	-	-	-	-	-	-	-	-	NIPSNAP
SX1_k127_4236556_11	1297865.APJD01000002_gene4145	1.474e-146	468.0	COG0640@1|root,COG0640@2|Bacteria,1MWCW@1224|Proteobacteria,2TTA5@28211|Alphaproteobacteria,3JRUF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, Arsenical Resistance Operon Repressor	ydfF	GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010035,GO:0010038,GO:0010288,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032791,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046870,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097063,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	HTH_20
SX1_k127_4236556_27	1230476.C207_06058	1.016e-45	168.0	2AQIN@1|root,31FRE@2|Bacteria,1N1Y3@1224|Proteobacteria,2UCJH@28211|Alphaproteobacteria,3K06F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	PXPV
SX1_k127_4236556_25	1297865.APJD01000002_gene4143	1.501e-48	174.0	2AQIN@1|root,346ZZ@2|Bacteria,1NHVY@1224|Proteobacteria,2UK72@28211|Alphaproteobacteria,3K24G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4236556_23	1297865.APJD01000002_gene4142	2.526e-52	187.0	2A9DC@1|root,30YII@2|Bacteria,1RIT3@1224|Proteobacteria,2UADS@28211|Alphaproteobacteria,3JZGF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4236556_19	1297865.APJD01000002_gene4141	7.776e-72	243.0	2CGAW@1|root,344FT@2|Bacteria,1RGC6@1224|Proteobacteria,2U873@28211|Alphaproteobacteria,3JZ52@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Cupin domain	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
SX1_k127_4236556_24	1297865.APJD01000002_gene4140	2.008e-50	181.0	2AACJ@1|root,30ZND@2|Bacteria,1RM1V@1224|Proteobacteria,2UAU3@28211|Alphaproteobacteria,3K002@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	BA14K-like protein	-	-	-	-	-	-	-	-	-	-	-	-	BA14K
SX1_k127_4236556_22	1297865.APJD01000002_gene4139	4.376e-58	203.0	2CIJJ@1|root,33GFX@2|Bacteria,1RJ9J@1224|Proteobacteria,2U9V7@28211|Alphaproteobacteria,3JZNN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4236556_3	1297865.APJD01000002_gene4138	0.0	1014.0	COG4799@1|root,COG4799@2|Bacteria,1MVAX@1224|Proteobacteria,2TRI1@28211|Alphaproteobacteria,3JTM9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Carboxyl transferase domain	pccB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016421,GO:0016874,GO:0016885,GO:0019752,GO:0031974,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0070013,GO:0071704,GO:0072329,GO:1901575	2.1.3.15,6.4.1.3	ko:K01966	ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200	M00373,M00741	R01859	RC00097,RC00609	ko00000,ko00001,ko00002,ko01000	-	-	-	Carboxyl_trans
SX1_k127_4236556_18	1297865.APJD01000002_gene4137	1.525e-81	272.0	2CWCM@1|root,32SZF@2|Bacteria,1N037@1224|Proteobacteria,2UCWU@28211|Alphaproteobacteria,3JYW3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF4260)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4260
SX1_k127_4236556_13	1297865.APJD01000002_gene4136	5.246e-134	429.0	2DGR7@1|root,2ZWZY@2|Bacteria,1P6GC@1224|Proteobacteria	1224|Proteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4236556_7	1297865.APJD01000002_gene4135	3.491e-193	608.0	COG0697@1|root,COG0697@2|Bacteria,1MVHN@1224|Proteobacteria,2TRCU@28211|Alphaproteobacteria,3JVKC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	ydeK	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_4236556_5	1297865.APJD01000002_gene4134	4.546e-291	896.0	COG1167@1|root,COG1167@2|Bacteria,1MV6F@1224|Proteobacteria,2TQP9@28211|Alphaproteobacteria,3JTK0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Alanine-glyoxylate amino-transferase	norG	-	-	-	-	-	-	-	-	-	-	-	Aminotran_1_2,GntR
SX1_k127_4236556_28	652103.Rpdx1_3726	0.0001243	51.0	COG0587@1|root,COG0587@2|Bacteria,1MUE4@1224|Proteobacteria,2TRUB@28211|Alphaproteobacteria,3JUU5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase	dnaE2	GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496	2.7.7.7	ko:K02337,ko:K14162	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_alpha,HHH_6,PHP,tRNA_anti-codon
SX1_k127_4236556_12	1297865.APJD01000002_gene4133	7.763e-137	436.0	COG2128@1|root,COG2128@2|Bacteria,1NC6E@1224|Proteobacteria,2U042@28211|Alphaproteobacteria,3JVRC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	-	-	4.1.1.44	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	-	R03470	RC00938	ko00000,ko00001,ko01000	-	-	-	-
SX1_k127_4236556_8	1297865.APJD01000002_gene4132	4.07e-185	584.0	COG2602@1|root,COG2602@2|Bacteria,1NWXE@1224|Proteobacteria,2TTNH@28211|Alphaproteobacteria,3JU3M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Penicillin binding protein transpeptidase domain	bla	-	3.5.2.6	ko:K17838	ko01501,map01501	-	R06363	RC01499	ko00000,ko00001,ko01000	-	-	-	Transpeptidase
SX1_k127_4236556_26	1297865.APJD01000002_gene4131	9.363e-47	173.0	COG2257@1|root,COG2257@2|Bacteria,1N7F1@1224|Proteobacteria,2UBW8@28211|Alphaproteobacteria,3K0H3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	FlhB HrpN YscU SpaS Family	MA20_35465	-	-	ko:K04061	-	-	-	-	ko00000,ko02044	-	-	-	Bac_export_2
SX1_k127_4236556_4	1297865.APJD01000002_gene4130	9.339e-318	976.0	COG3144@1|root,COG3144@2|Bacteria,1MV22@1224|Proteobacteria,2TRBM@28211|Alphaproteobacteria,3JSGN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Flagellar hook-length control protein FliK	-	-	-	-	-	-	-	-	-	-	-	-	Flg_hook
SX1_k127_4236556_10	1297865.APJD01000002_gene4129	9.679e-167	527.0	COG5387@1|root,COG5387@2|Bacteria,1Q3B5@1224|Proteobacteria,2TVK1@28211|Alphaproteobacteria,3JSG6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	ATP12 chaperone protein	-	-	-	-	-	-	-	-	-	-	-	-	ATP12
SX1_k127_4236556_16	1297865.APJD01000002_gene4128	2.01e-84	284.0	2DR2Z@1|root,339YC@2|Bacteria,1RA0M@1224|Proteobacteria,2U5KN@28211|Alphaproteobacteria,3JY55@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4236556_2	1297865.APJD01000002_gene4127	0.0	1206.0	COG2132@1|root,COG2132@2|Bacteria,1MU0J@1224|Proteobacteria,2U19S@28211|Alphaproteobacteria,3JZAN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Multicopper oxidase	-	-	-	-	-	-	-	-	-	-	-	-	Cu-oxidase,Cu-oxidase_2,Cu-oxidase_3
SX1_k127_4236556_0	1297865.APJD01000002_gene4126	0.0	1547.0	COG3511@1|root,COG3511@2|Bacteria,1MVNS@1224|Proteobacteria,2U1QU@28211|Alphaproteobacteria,3JW8V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Phosphoesterase family	-	-	-	-	-	-	-	-	-	-	-	-	Phosphoesterase
SX1_k127_4236556_15	1297865.APJD01000002_gene4125	1.604e-94	312.0	COG0454@1|root,COG0456@2|Bacteria,1RH0C@1224|Proteobacteria,2U9B4@28211|Alphaproteobacteria,3JY3V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
SX1_k127_4236856_1	1297865.APJD01000011_gene6828	1.312e-270	833.0	COG3614@1|root,COG3920@1|root,COG3614@2|Bacteria,COG3920@2|Bacteria,1MXU8@1224|Proteobacteria,2TSGK@28211|Alphaproteobacteria,3JRZE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Histidine kinase	MA20_18310	-	-	-	-	-	-	-	-	-	-	-	CHASE,HWE_HK,PAS
SX1_k127_4236856_2	1297865.APJD01000011_gene6829	2.08e-225	700.0	COG1858@1|root,COG1858@2|Bacteria,1MV70@1224|Proteobacteria,2TRTJ@28211|Alphaproteobacteria,3JTMC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Di-haem cytochrome c peroxidase	-	-	1.11.1.5	ko:K00428	-	-	-	-	ko00000,ko01000	-	-	-	CCP_MauG,Cytochrom_C
SX1_k127_4236856_8	1230476.C207_02516	7.309e-13	70.0	2BJ3F@1|root,32DCC@2|Bacteria,1NM40@1224|Proteobacteria,2UK4Z@28211|Alphaproteobacteria,3K248@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4236856_3	1297865.APJD01000011_gene6831	1.402e-210	657.0	COG3544@1|root,COG3544@2|Bacteria,1QBQI@1224|Proteobacteria,2TSAX@28211|Alphaproteobacteria,3JSRT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4236856_5	1297865.APJD01000011_gene6832	8.224e-72	243.0	COG3794@1|root,COG3794@2|Bacteria,1RE6B@1224|Proteobacteria,2UAER@28211|Alphaproteobacteria,3JZ39@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	PFAM blue (type 1) copper domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Copper-bind,Cupredoxin_1
SX1_k127_4236856_0	1297865.APJD01000011_gene6833	0.0	1878.0	COG5000@1|root,COG5001@1|root,COG5000@2|Bacteria,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,3JTV0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Diguanylate cyclase	-	-	-	-	-	-	-	-	-	-	-	-	4HB_MCP_1,EAL,GGDEF,HAMP,MHYT,PAS,PAS_3,PAS_7,PAS_8,dCache_1
SX1_k127_4236856_9	224911.27352803	2.914e-05	51.0	COG1173@1|root,COG1173@2|Bacteria,1MWP1@1224|Proteobacteria,2TSUG@28211|Alphaproteobacteria,3JR90@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Binding-protein-dependent transport system inner membrane component	MA20_13270	-	-	ko:K02034	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
SX1_k127_4236856_4	1297865.APJD01000011_gene6834	2.61e-109	355.0	COG1595@1|root,COG1595@2|Bacteria,1MZMC@1224|Proteobacteria,2TUUZ@28211|Alphaproteobacteria,3JSQZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Belongs to the sigma-70 factor family. ECF subfamily	sigH	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
SX1_k127_4236856_7	398525.KB900701_gene2330	5.888e-35	134.0	28XZJ@1|root,2ZJVB@2|Bacteria,1N8JP@1224|Proteobacteria,2UHZC@28211|Alphaproteobacteria,3K1HC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	QU41_02790	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4236856_6	1297865.APJD01000011_gene6836	5.239e-50	181.0	COG0784@1|root,COG0784@2|Bacteria,1MX3Y@1224|Proteobacteria,2TT2R@28211|Alphaproteobacteria,3JTEE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	cheY-homologous receiver domain	phyR	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Sigma70_r4_2
SX1_k127_4238256_0	1297865.APJD01000003_gene6425	1.033e-276	854.0	COG1680@1|root,COG1680@2|Bacteria,1MVPR@1224|Proteobacteria,2TRWZ@28211|Alphaproteobacteria,3JR5S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase	MA20_00470	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SX1_k127_4238256_1	1297865.APJD01000003_gene6426	4.872e-170	534.0	COG2141@1|root,COG2141@2|Bacteria,1PJES@1224|Proteobacteria,2U3CM@28211|Alphaproteobacteria,3JVGM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	1.14.14.35	ko:K17228	ko00920,map00920	-	R10203	RC02556,RC03080	ko00000,ko00001,ko01000	-	-	-	Bac_luciferase
SX1_k127_4246772_0	1230476.C207_02561	2.072e-280	864.0	COG2244@1|root,COG2244@2|Bacteria,1MWKV@1224|Proteobacteria,2TTYS@28211|Alphaproteobacteria,3JSUH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Polysaccharide biosynthesis protein	MA20_18165	-	-	-	-	-	-	-	-	-	-	-	Polysacc_synt,Polysacc_synt_C
SX1_k127_4246772_6	1297865.APJD01000011_gene6873	1.506e-79	266.0	COG3686@1|root,COG3686@2|Bacteria,1N00R@1224|Proteobacteria,2U94Y@28211|Alphaproteobacteria,3K17B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	MAPEG family	-	-	-	-	-	-	-	-	-	-	-	-	MAPEG
SX1_k127_4246772_3	1297865.APJD01000011_gene6872	2.097e-164	518.0	COG1028@1|root,COG1028@2|Bacteria,1MU5Y@1224|Proteobacteria,2TRNQ@28211|Alphaproteobacteria,3JRK8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	MA20_18175	-	1.1.1.30	ko:K00019	ko00072,ko00650,ko01100,map00072,map00650,map01100	M00088	R01361	RC00117	ko00000,ko00001,ko00002,ko01000	-	-	-	adh_short_C2
SX1_k127_4246772_1	1297865.APJD01000011_gene6871	2.013e-257	794.0	COG1752@1|root,COG1752@2|Bacteria,1MVHW@1224|Proteobacteria,2TS4V@28211|Alphaproteobacteria,3JT6B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Patatin phospholipase	MA20_18180	-	-	ko:K07001	-	-	-	-	ko00000	-	-	-	DUF3734,Patatin
SX1_k127_4246772_4	1297865.APJD01000011_gene6870	2.328e-103	338.0	COG2340@1|root,COG2340@2|Bacteria,1MZ84@1224|Proteobacteria,2UFSP@28211|Alphaproteobacteria,3JVHE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Cysteine-rich secretory protein family	MA20_18185	-	-	-	-	-	-	-	-	-	-	-	CAP
SX1_k127_4246772_5	1297865.APJD01000011_gene6869	2.916e-100	335.0	COG4319@1|root,COG4319@2|Bacteria,1R7CB@1224|Proteobacteria,2U49V@28211|Alphaproteobacteria,3JUE2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_3
SX1_k127_4246772_2	1297865.APJD01000011_gene6868	3.223e-198	618.0	COG1118@1|root,COG1118@2|Bacteria,1QTTT@1224|Proteobacteria,2TVZ3@28211|Alphaproteobacteria,3JTDA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system	cysA	-	3.6.3.25	ko:K02045	ko00920,ko02010,map00920,map02010	M00185	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.6.1,3.A.1.6.3	-	-	ABC_tran,TOBE_3
SX1_k127_4246857_2	1297865.APJD01000011_gene6686	3.095e-161	509.0	COG1028@1|root,COG1028@2|Bacteria,1MWGC@1224|Proteobacteria,2TSNX@28211|Alphaproteobacteria,3JQUD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Dehydrogenase	MA20_18560	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_4246857_3	1038859.AXAU01000004_gene4512	8.506e-05	49.0	COG0697@1|root,COG0697@2|Bacteria,1MVGC@1224|Proteobacteria,2TS6Y@28211|Alphaproteobacteria,3JV1U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	MA20_39610	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_4246857_0	1230476.C207_03163	1.194e-255	791.0	COG0626@1|root,COG0626@2|Bacteria,1MU57@1224|Proteobacteria,2TTMF@28211|Alphaproteobacteria,3JR3R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide	metZ	GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.5.1.48	ko:K01739,ko:K10764	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	M00017	R00999,R01288,R02508,R03217,R03260,R04944,R04945,R04946	RC00020,RC00056,RC00069,RC00420,RC02848,RC02866	ko00000,ko00001,ko00002,ko01000	-	-	-	Cys_Met_Meta_PP
SX1_k127_4246857_1	1297865.APJD01000011_gene6688	3.701e-245	758.0	COG0717@1|root,COG0717@2|Bacteria,1MVDH@1224|Proteobacteria,2TR5U@28211|Alphaproteobacteria,3JRYW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	2'-deoxycytidine 5'-triphosphate deaminase (DCD)	dcd	-	3.5.4.13	ko:K01494	ko00240,ko01100,map00240,map01100	M00053	R00568,R02325	RC00074	ko00000,ko00001,ko00002,ko01000	-	-	-	DCD
SX1_k127_4250685_6	1297865.APJD01000003_gene6269	1.175e-154	490.0	2AJHU@1|root,31A4G@2|Bacteria,1NVI4@1224|Proteobacteria,2URBB@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4250685_0	1297865.APJD01000003_gene6268	0.0	1393.0	COG0457@1|root,COG0859@1|root,COG0457@2|Bacteria,COG0859@2|Bacteria,1MUZK@1224|Proteobacteria,2TS0U@28211|Alphaproteobacteria,3JRSC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_9,TPR_1,TPR_11,TPR_16,TPR_2,TPR_8
SX1_k127_4250685_9	1297865.APJD01000003_gene6267	3.505e-118	381.0	COG1309@1|root,COG1309@2|Bacteria,1NB71@1224|Proteobacteria,2UBX7@28211|Alphaproteobacteria,3K4F8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_4250685_11	1297865.APJD01000003_gene6265	1.9e-103	341.0	COG1028@1|root,COG1028@2|Bacteria,1MXNY@1224|Proteobacteria,2U126@28211|Alphaproteobacteria,3JUEP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_4250685_20	402881.Plav_0970	3.665e-51	185.0	COG1959@1|root,COG1959@2|Bacteria,1RGVW@1224|Proteobacteria,2UA5C@28211|Alphaproteobacteria,1JQ8Y@119043|Rhodobiaceae	28211|Alphaproteobacteria	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	Rrf2
SX1_k127_4250685_5	1297865.APJD01000003_gene6263	1.374e-168	531.0	COG0500@1|root,COG2226@2|Bacteria,1MXP4@1224|Proteobacteria,2U0YK@28211|Alphaproteobacteria,3K60X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	ubiE/COQ5 methyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_25
SX1_k127_4250685_25	1230476.C207_05159	1.158e-17	94.0	2BICD@1|root,32CIG@2|Bacteria,1NMAS@1224|Proteobacteria,2UMS4@28211|Alphaproteobacteria,3K1Z5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4250685_15	1297865.APJD01000003_gene6262	4.676e-76	260.0	COG1970@1|root,COG1970@2|Bacteria,1RHG8@1224|Proteobacteria,2U99Y@28211|Alphaproteobacteria,3JY5H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell	mscL	GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066	-	ko:K03282	-	-	-	-	ko00000,ko02000	1.A.22.1	-	-	MscL
SX1_k127_4250685_22	1297865.APJD01000003_gene6261	2.028e-47	171.0	2AFV7@1|root,315XR@2|Bacteria,1NFQS@1224|Proteobacteria,2UJ94@28211|Alphaproteobacteria,3K12M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4250685_17	1297865.APJD01000003_gene6260	2.553e-69	237.0	2C8DW@1|root,32RKY@2|Bacteria,1MZUD@1224|Proteobacteria,2UCNB@28211|Alphaproteobacteria,3JZBU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF3597)	MA20_41375	-	-	-	-	-	-	-	-	-	-	-	DUF3597
SX1_k127_4250685_12	1297865.APJD01000003_gene6259	2.889e-95	320.0	COG1100@1|root,COG1100@2|Bacteria,1PTB9@1224|Proteobacteria,2U4MB@28211|Alphaproteobacteria,3JV3E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Ras of Complex, Roc, domain of DAPkinase	-	-	-	-	-	-	-	-	-	-	-	-	Ras
SX1_k127_4250685_1	1297865.APJD01000003_gene6258	0.0	1093.0	COG2885@1|root,COG2885@2|Bacteria,1R508@1224|Proteobacteria,2U31G@28211|Alphaproteobacteria,3JUTU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	OmpA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA
SX1_k127_4250685_19	1297865.APJD01000003_gene6257	3.102e-65	226.0	2CIYR@1|root,2ZU5E@2|Bacteria,1RFC2@1224|Proteobacteria,2U8GX@28211|Alphaproteobacteria,3JYZ3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4250685_7	1297865.APJD01000003_gene6256	9.828e-133	424.0	COG2197@1|root,COG2197@2|Bacteria,1NQH7@1224|Proteobacteria,2U895@28211|Alphaproteobacteria,3K5Z3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	helix_turn_helix, Lux Regulon	degU	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
SX1_k127_4250685_3	1297865.APJD01000003_gene6255	1.642e-220	685.0	COG4585@1|root,COG4585@2|Bacteria,1QUYA@1224|Proteobacteria,2U0BQ@28211|Alphaproteobacteria,3JXMQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA_3,Reg_prop,Y_Y_Y
SX1_k127_4250685_10	1297865.APJD01000003_gene6254	2.455e-107	349.0	2A9FP@1|root,30YM9@2|Bacteria,1RIZ4@1224|Proteobacteria,2UBPC@28211|Alphaproteobacteria,3JZSB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4250685_18	1297865.APJD01000003_gene6253	4.326e-66	225.0	2AFRT@1|root,315TS@2|Bacteria,1NEVZ@1224|Proteobacteria,2UIVX@28211|Alphaproteobacteria,3K1EK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4250685_14	1297865.APJD01000003_gene6251	3.789e-85	283.0	COG1846@1|root,COG1846@2|Bacteria,1RI74@1224|Proteobacteria,2UAPB@28211|Alphaproteobacteria,3JZYN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SX1_k127_4250685_8	1297865.APJD01000003_gene6250	2.696e-119	383.0	COG1335@1|root,COG1335@2|Bacteria,1QK2B@1224|Proteobacteria,2U5X9@28211|Alphaproteobacteria,3JXYP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Isochorismatase family	-	-	-	-	-	-	-	-	-	-	-	-	Isochorismatase
SX1_k127_4250685_23	1122604.JONR01000013_gene3280	5.559e-40	152.0	2CC1B@1|root,32RUI@2|Bacteria,1N1T2@1224|Proteobacteria,1ST07@1236|Gammaproteobacteria,1XB8X@135614|Xanthomonadales	135614|Xanthomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4250685_2	1297865.APJD01000003_gene6248	7.689e-260	802.0	COG0477@1|root,COG2814@2|Bacteria,1QTX0@1224|Proteobacteria,2TX00@28211|Alphaproteobacteria,3JRZT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Transmembrane secretion effector	-	-	-	ko:K08217	-	-	-	-	br01600,ko00000,ko01504,ko02000	2.A.1.21.1,2.A.1.21.22	-	-	MFS_1,MFS_3
SX1_k127_4250685_16	1230476.C207_05175	8.589e-74	250.0	COG5490@1|root,COG5490@2|Bacteria,1PTJQ@1224|Proteobacteria,2V5EZ@28211|Alphaproteobacteria,3JYEI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Phasin protein	-	-	-	-	-	-	-	-	-	-	-	-	Phasin_2
SX1_k127_4250685_4	1297865.APJD01000003_gene6246	1.493e-205	643.0	COG2267@1|root,COG2267@2|Bacteria,1N03H@1224|Proteobacteria,2U2EH@28211|Alphaproteobacteria,3JV1A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Serine aminopeptidase, S33	-	-	3.1.1.76	ko:K22250	-	-	-	-	ko00000,ko01000	-	-	-	Abhydrolase_1
SX1_k127_4250685_13	1149133.ppKF707_2661	3.057e-94	314.0	COG3243@1|root,COG3243@2|Bacteria,1MU68@1224|Proteobacteria,1RPVQ@1236|Gammaproteobacteria,1YIR4@136841|Pseudomonas aeruginosa group	1236|Gammaproteobacteria	I	Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus	phaC	-	-	ko:K03821	ko00650,map00650	-	R04254	RC00004	ko00000,ko00001,ko01000	-	-	-	PhaC_N
SX1_k127_4252321_1	1297865.APJD01000018_gene5709	2.541e-141	449.0	COG1045@1|root,COG1045@2|Bacteria,1MVFX@1224|Proteobacteria,2TTNU@28211|Alphaproteobacteria,3JU28@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Bacterial transferase hexapeptide (six repeats)	srpH	-	2.3.1.30	ko:K00640	ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111	M00021	R00586	RC00004,RC00041	ko00000,ko00001,ko00002,ko01000	-	-	-	Hexapep,SATase_N
SX1_k127_4252321_0	1297865.APJD01000018_gene5708	4.525e-297	923.0	COG2141@1|root,COG2141@2|Bacteria,1MUVN@1224|Proteobacteria,2TR26@28211|Alphaproteobacteria,3JUH0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Luciferase-like monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	Bac_luciferase
SX1_k127_4256626_0	1297865.APJD01000022_gene344	0.0	998.0	COG0488@1|root,COG0488@2|Bacteria,1MX6Y@1224|Proteobacteria,2U10A@28211|Alphaproteobacteria,3JV1Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	ATPases associated with a variety of cellular activities	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran
SX1_k127_4256626_1	1297865.APJD01000022_gene345	6.615e-247	762.0	COG0457@1|root,COG0457@2|Bacteria,1N01S@1224|Proteobacteria,2TSR4@28211|Alphaproteobacteria,3JTG9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	COG0457 FOG TPR repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4259615_1	1297865.APJD01000009_gene2795	4.629e-165	519.0	COG0329@1|root,COG0329@2|Bacteria,1R45B@1224|Proteobacteria,2U0PG@28211|Alphaproteobacteria,3JUAU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)	MA20_05055	-	4.3.3.7	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R10147	RC03062,RC03063	ko00000,ko00001,ko00002,ko01000	-	-	-	DHDPS
SX1_k127_4259615_0	1297865.APJD01000009_gene2796	0.0	1527.0	COG2217@1|root,COG2217@2|Bacteria,1MU08@1224|Proteobacteria,2TR80@28211|Alphaproteobacteria,3JQNW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ATPase, P-type (transporting), HAD superfamily, subfamily IC	-	-	3.6.3.54	ko:K17686	ko01524,ko04016,map01524,map04016	-	R00086	RC00002	ko00000,ko00001,ko01000	3.A.3.5	-	-	E1-E2_ATPase,Hydrolase,YHS
SX1_k127_4259615_2	1230476.C207_03557	3.267e-52	186.0	COG1937@1|root,COG1937@2|Bacteria,1N9P2@1224|Proteobacteria,2UF3F@28211|Alphaproteobacteria,3JZE7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metal-sensitive transcriptional repressor	-	-	-	ko:K21600	-	-	-	-	ko00000,ko03000	-	-	-	Trns_repr_metal
SX1_k127_4278255_10	323097.Nham_2455	3.984e-33	129.0	COG0102@1|root,COG0102@2|Bacteria,1RA11@1224|Proteobacteria,2U5FM@28211|Alphaproteobacteria,3JUX1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly	rplM	GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02871	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L13
SX1_k127_4278255_8	1230476.C207_05000	1.544e-83	278.0	COG2050@1|root,COG2050@2|Bacteria,1MZRJ@1224|Proteobacteria,2U9BM@28211|Alphaproteobacteria,3JY5S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Thioesterase superfamily	MA20_36950	-	-	-	-	-	-	-	-	-	-	-	4HBT
SX1_k127_4278255_6	1297865.APJD01000020_gene107	9.653e-167	525.0	COG1024@1|root,COG1024@2|Bacteria,1MUJ7@1224|Proteobacteria,2TTMB@28211|Alphaproteobacteria,3JRTP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	enoyl-CoA hydratase	MA20_36945	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_4278255_7	1297865.APJD01000020_gene106	1.592e-121	391.0	COG1832@1|root,COG1832@2|Bacteria,1N03D@1224|Proteobacteria,2TUIY@28211|Alphaproteobacteria,3JQQK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	CoA binding domain	yccU	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	ko:K06929	-	-	-	-	ko00000	-	-	-	CoA_binding_2
SX1_k127_4278255_1	1297865.APJD01000020_gene105	7.706e-279	858.0	COG2873@1|root,COG2873@2|Bacteria,1NQME@1224|Proteobacteria,2TQW9@28211|Alphaproteobacteria,3JTRP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Beta-eliminating lyase	metY	GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003961,GO:0004124,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006555,GO:0006563,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0017144,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0050667,GO:0071265,GO:0071266,GO:0071268,GO:0071269,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.5.1.47,2.5.1.49	ko:K01738,ko:K01740	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	M00021	R00897,R01287,R03601,R04859	RC00020,RC02814,RC02821,RC02848	ko00000,ko00001,ko00002,ko01000	-	-	-	Cys_Met_Meta_PP
SX1_k127_4278255_9	1297865.APJD01000020_gene104	4.864e-83	276.0	2A7YT@1|root,30WYW@2|Bacteria,1RF6R@1224|Proteobacteria,2U7U1@28211|Alphaproteobacteria,3JZ67@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4278255_4	1230476.C207_04995	4.215e-200	631.0	COG4111@1|root,COG4111@2|Bacteria,1MXHA@1224|Proteobacteria,2TQQU@28211|Alphaproteobacteria,3JRTI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	belongs to the nudix hydrolase family	MA20_42130	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4278255_3	1297865.APJD01000020_gene102	4.176e-213	662.0	COG0379@1|root,COG0379@2|Bacteria,1MWQU@1224|Proteobacteria,2TRPG@28211|Alphaproteobacteria,3JQQY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate	nadA	-	2.5.1.72	ko:K03517	ko00760,ko01100,map00760,map01100	M00115	R04292	RC01119	ko00000,ko00001,ko00002,ko01000	-	-	-	NadA
SX1_k127_4278255_0	1297865.APJD01000020_gene101	0.0	1005.0	COG0029@1|root,COG0029@2|Bacteria,1RBQW@1224|Proteobacteria,2TS0E@28211|Alphaproteobacteria,3JSSV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the oxidation of L-aspartate to iminoaspartate	nadB	-	1.4.3.16	ko:K00278	ko00250,ko00760,ko01100,map00250,map00760,map01100	M00115	R00357,R00481	RC00006,RC02566	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_2,Succ_DH_flav_C
SX1_k127_4278255_5	1297865.APJD01000020_gene100	9.154e-170	539.0	COG0157@1|root,COG0157@2|Bacteria,1MW0C@1224|Proteobacteria,2TS7C@28211|Alphaproteobacteria,3JSBS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Belongs to the NadC ModD family	nadC	-	2.4.2.19	ko:K00767,ko:K03813	ko00760,ko01100,map00760,map01100	M00115	R03348	RC02877	ko00000,ko00001,ko00002,ko01000	-	-	-	QRPTase_C,QRPTase_N
SX1_k127_4278255_2	172088.AUGA01000033_gene4567	8.821e-218	679.0	COG1612@1|root,COG1612@2|Bacteria,1MVJ4@1224|Proteobacteria,2TR0M@28211|Alphaproteobacteria,3JR20@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group	ctaA	-	-	ko:K02259	ko00190,ko00860,ko01100,ko01110,ko02020,ko04714,map00190,map00860,map01100,map01110,map02020,map04714	M00154	R07412	RC00769	ko00000,ko00001,ko00002,ko03029	3.D.4.4	-	-	COX15-CtaA
SX1_k127_4280258_7	1297865.APJD01000006_gene4398	1.192e-49	177.0	COG0296@1|root,COG0296@2|Bacteria,1QTVN@1224|Proteobacteria,2TR5K@28211|Alphaproteobacteria,3JUN5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position	glgB	-	2.4.1.18	ko:K00700	ko00500,ko01100,ko01110,map00500,map01100,map01110	M00565	R02110	-	ko00000,ko00001,ko00002,ko01000,ko04147	-	CBM48,GH13	-	Alpha-amylase,Alpha-amylase_C,CBM_48
SX1_k127_4280258_2	1297865.APJD01000006_gene4397	0.0	1455.0	COG1523@1|root,COG1523@2|Bacteria,1MU19@1224|Proteobacteria,2TRVS@28211|Alphaproteobacteria,3JR1B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Belongs to the glycosyl hydrolase 13 family	MA20_00910	-	3.2.1.196,3.2.1.68	ko:K01214,ko:K02438	ko00500,ko01100,ko01110,map00500,map01100,map01110	M00565	R02111,R09995,R11261	-	ko00000,ko00001,ko00002,ko01000	-	CBM48,GH13	-	Alpha-amylase,CBM_48
SX1_k127_4280258_3	1297865.APJD01000006_gene4396	0.0	1243.0	COG0296@1|root,COG0296@2|Bacteria,1MVM7@1224|Proteobacteria,2TQUJ@28211|Alphaproteobacteria,3JUR0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	4-alpha-D-((1- 4)-alpha-D-glucano)trehalose trehalohydrolase	treZ	-	2.4.1.18,3.2.1.141	ko:K00700,ko:K01236	ko00500,ko01100,ko01110,map00500,map01100,map01110	M00565	R02110,R09995,R11256	RC00049	ko00000,ko00001,ko00002,ko01000,ko04147	-	CBM48,GH13	-	Alpha-amylase,CBM_48,DUF3459
SX1_k127_4280258_0	1297865.APJD01000006_gene4395	0.0	1905.0	COG3280@1|root,COG3280@2|Bacteria,1QTVK@1224|Proteobacteria,2TW4J@28211|Alphaproteobacteria,3JS6B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Alpha amylase, catalytic domain	treY	-	5.4.99.15	ko:K06044	ko00500,ko01100,ko01110,map00500,map01100,map01110	M00565	R01824,R09995	-	ko00000,ko00001,ko00002,ko01000	-	GH13	-	Alpha-amylase
SX1_k127_4280258_6	1297865.APJD01000006_gene4394	1.531e-58	203.0	2E9WT@1|root,3342I@2|Bacteria,1NBEH@1224|Proteobacteria,2UFGC@28211|Alphaproteobacteria,3JZIT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn)	MA20_00895	-	-	-	-	-	-	-	-	-	-	-	PHA_gran_rgn
SX1_k127_4280258_1	1297865.APJD01000006_gene4392	0.0	1795.0	COG1793@1|root,COG3285@1|root,COG1793@2|Bacteria,COG3285@2|Bacteria,1MVWY@1224|Proteobacteria,2TRSZ@28211|Alphaproteobacteria,3JR3Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DNA ligase	ligD	-	6.5.1.1	ko:K01971	ko03450,map03450	-	R00381	RC00005	ko00000,ko00001,ko01000,ko03400	-	-	-	DNA_ligase_A_C,DNA_ligase_A_M,LigD_N
SX1_k127_4280258_4	1297865.APJD01000006_gene4391	4.875e-182	572.0	COG1273@1|root,COG1273@2|Bacteria,1N4UX@1224|Proteobacteria,2TRTI@28211|Alphaproteobacteria,3JVAZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD	ku	-	-	ko:K10979	ko03450,map03450	-	-	-	ko00000,ko00001,ko03400	-	-	-	Ku
SX1_k127_4280258_8	398525.KB900701_gene6846	2.671e-24	107.0	2EIK5@1|root,33CBF@2|Bacteria	2|Bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4280258_5	1297865.APJD01000006_gene4389	9.233e-86	284.0	COG0745@1|root,COG0745@2|Bacteria,1MWZ5@1224|Proteobacteria,2TV3A@28211|Alphaproteobacteria,3JTFA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Transcriptional regulatory protein, C terminal	kdpE	-	-	ko:K07667	ko02020,ko02024,map02020,map02024	M00454	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
SX1_k127_4293898_12	1297865.APJD01000024_gene385	2.327e-21	93.0	COG1917@1|root,COG1917@2|Bacteria,1RH1R@1224|Proteobacteria,2UBCW@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Cupin 2, conserved barrel domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4293898_8	1297865.APJD01000024_gene384	4.108e-85	287.0	29N28@1|root,308ZZ@2|Bacteria,1RM77@1224|Proteobacteria,2UB1Q@28211|Alphaproteobacteria,3JZF8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4293898_11	1297865.APJD01000024_gene383	5.78e-31	125.0	2AG3Z@1|root,3168K@2|Bacteria,1NGRZ@1224|Proteobacteria,2UNG3@28211|Alphaproteobacteria,3K1SH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4293898_6	1297865.APJD01000024_gene382	8.327e-112	363.0	COG1309@1|root,COG1309@2|Bacteria,1PXRI@1224|Proteobacteria,2TSE8@28211|Alphaproteobacteria,3JWS6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_C_11,TetR_N
SX1_k127_4293898_7	1297865.APJD01000024_gene381	1.268e-101	342.0	COG2080@1|root,COG2080@2|Bacteria,1RDAS@1224|Proteobacteria,2TUG8@28211|Alphaproteobacteria,3JSCH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	[2Fe-2S] binding domain	MA20_09755	-	-	ko:K13483	ko00230,ko01100,ko01120,map00230,map01100,map01120	M00546	R01768,R02103	RC00143	ko00000,ko00001,ko00002	-	-	-	Fer2,Fer2_2
SX1_k127_4293898_3	1297865.APJD01000024_gene380	5.937e-217	678.0	COG1319@1|root,COG1319@2|Bacteria,1MVJS@1224|Proteobacteria,2TRAR@28211|Alphaproteobacteria,3JR53@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	MA20_09760	-	1.17.1.4,1.3.7.9	ko:K04109,ko:K11178	ko00230,ko00362,ko00627,ko01100,ko01120,ko01220,map00230,map00362,map00627,map01100,map01120,map01220	M00546	R01768,R02103,R05316	RC00143,RC00490	ko00000,ko00001,ko00002,ko01000	-	-	-	CO_deh_flav_C,FAD_binding_5
SX1_k127_4293898_0	1297865.APJD01000024_gene379	0.0	1496.0	COG1529@1|root,COG1529@2|Bacteria,1MUEA@1224|Proteobacteria,2TRFN@28211|Alphaproteobacteria,3JSKD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	MA20_09765	-	1.17.1.4	ko:K11177	ko00230,ko01100,ko01120,map00230,map01100,map01120	M00546	R01768,R02103	RC00143	ko00000,ko00001,ko00002,ko01000	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2
SX1_k127_4293898_2	1297865.APJD01000024_gene378	7.04e-223	690.0	COG4188@1|root,COG4188@2|Bacteria,1MW2N@1224|Proteobacteria,2U54T@28211|Alphaproteobacteria,3JSGT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	dienelactone hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	DLH,Hydrolase_4,PAF-AH_p_II,Peptidase_S9
SX1_k127_4293898_9	1297865.APJD01000024_gene377	7.699e-77	260.0	COG2050@1|root,COG2050@2|Bacteria,1RFCZ@1224|Proteobacteria,2U8Z5@28211|Alphaproteobacteria,3JZ5P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Domain of unknown function (DUF4442)	-	-	-	-	-	-	-	-	-	-	-	-	4HBT
SX1_k127_4293898_10	1297865.APJD01000024_gene376	4.249e-65	223.0	COG5470@1|root,COG5470@2|Bacteria,1RIH6@1224|Proteobacteria,2UCCI@28211|Alphaproteobacteria,3JZN4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	NIPSNAP	-	-	-	-	-	-	-	-	-	-	-	-	NIPSNAP
SX1_k127_4293898_1	1297865.APJD01000024_gene375	0.0	1040.0	COG0405@1|root,COG0405@2|Bacteria,1MXXD@1224|Proteobacteria,2TSB2@28211|Alphaproteobacteria,3JSDC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Gamma-glutamyltranspeptidase	MA20_09815	-	2.3.2.2,3.4.19.13	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	-	R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935	RC00064,RC00090,RC00096	ko00000,ko00001,ko01000,ko01002	-	-	-	G_glu_transpept
SX1_k127_4293898_5	398525.KB900701_gene6984	1.252e-151	481.0	COG1024@1|root,COG1024@2|Bacteria,1MVQN@1224|Proteobacteria,2TUXD@28211|Alphaproteobacteria,3JVZQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	MA20_09820	-	5.3.3.18	ko:K15866	ko00360,ko01120,map00360,map01120	-	R09837,R09839	RC00004,RC00326,RC02689,RC03003	ko00000,ko00001,ko01000	-	-	-	ECH_1
SX1_k127_4293898_4	1297865.APJD01000006_gene4313	6.068e-169	531.0	COG0604@1|root,COG0604@2|Bacteria,1MXUX@1224|Proteobacteria,2TTWF@28211|Alphaproteobacteria,3JTZF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Zinc-binding dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_zinc_N
SX1_k127_4296647_3	1297865.APJD01000009_gene2946	4.346e-218	676.0	COG2055@1|root,COG2055@2|Bacteria,1MWQY@1224|Proteobacteria,2TR37@28211|Alphaproteobacteria,3JVES@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Malate/L-lactate dehydrogenase	MA20_06110	-	1.1.1.350	ko:K00073,ko:K13574	ko00230,ko01120,map00230,map01120	-	R02935,R02936	RC00169	ko00000,ko00001,ko01000	-	-	-	Ldh_2
SX1_k127_4296647_1	1297865.APJD01000009_gene2947	4.047e-304	932.0	COG2141@1|root,COG2141@2|Bacteria,1MUVN@1224|Proteobacteria,2TR26@28211|Alphaproteobacteria,3JSBW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Luciferase-like monooxygenase	MA20_06115	-	-	-	-	-	-	-	-	-	-	-	Bac_luciferase
SX1_k127_4296647_6	1297865.APJD01000009_gene2948	1.305e-176	553.0	COG0179@1|root,COG0179@2|Bacteria,1NM05@1224|Proteobacteria,2U0IB@28211|Alphaproteobacteria,3JRKT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Domain of unknown function (DUF2437)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2437,FAA_hydrolase
SX1_k127_4296647_5	1297865.APJD01000009_gene2949	1.179e-190	596.0	COG0583@1|root,COG0583@2|Bacteria,1MU2E@1224|Proteobacteria,2TUNU@28211|Alphaproteobacteria,3JV4C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_4296647_9	1297865.APJD01000009_gene2950	1.356e-62	219.0	2DPWN@1|root,333PM@2|Bacteria,1RI1Z@1224|Proteobacteria,2U9SI@28211|Alphaproteobacteria,3JZH0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	MIase
SX1_k127_4296647_7	1297865.APJD01000009_gene2951	9.455e-111	360.0	2E8II@1|root,332WK@2|Bacteria,1RAN8@1224|Proteobacteria,2U5M9@28211|Alphaproteobacteria,3JY9P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4296647_11	224911.27354970	8.907e-08	55.0	COG2897@1|root,COG2897@2|Bacteria,1MW4B@1224|Proteobacteria,2TR9R@28211|Alphaproteobacteria,3JT1H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rhodanese Homology Domain	sseA	-	2.8.1.1,2.8.1.2	ko:K01011	ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122	-	R01931,R03105,R03106	RC00214	ko00000,ko00001,ko01000	-	-	-	Rhodanese
SX1_k127_4296647_8	1297865.APJD01000009_gene2952	4.311e-92	302.0	COG1522@1|root,COG1522@2|Bacteria,1R7SW@1224|Proteobacteria,2TW1G@28211|Alphaproteobacteria,3JV2B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix ASNC type	MA20_06125	-	-	ko:K03719	-	-	-	-	ko00000,ko03000,ko03036	-	-	-	AsnC_trans_reg,HTH_24
SX1_k127_4296647_0	1297865.APJD01000009_gene2953	0.0	2341.0	COG1014@1|root,COG4231@1|root,COG1014@2|Bacteria,COG4231@2|Bacteria,1MUKS@1224|Proteobacteria,2TSHH@28211|Alphaproteobacteria,3JVSS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Pyruvate ferredoxin/flavodoxin oxidoreductase	MA20_06130	-	1.2.7.8	ko:K04090	-	-	-	-	br01601,ko00000,ko01000	-	-	-	POR,TPP_enzyme_C
SX1_k127_4296647_2	1157708.KB907452_gene3921	1.835e-233	731.0	COG0591@1|root,COG0591@2|Bacteria,1MWX6@1224|Proteobacteria,2W90W@28216|Betaproteobacteria,4AHZ1@80864|Comamonadaceae	28216|Betaproteobacteria	E	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family	-	-	-	ko:K03307	-	-	-	-	ko00000	2.A.21	-	-	SSF
SX1_k127_4296647_10	1297865.APJD01000009_gene2955	9.568e-35	133.0	2EGF3@1|root,33A73@2|Bacteria,1N9KR@1224|Proteobacteria,2UGXF@28211|Alphaproteobacteria,3K1D7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3311)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3311
SX1_k127_4296647_4	1297865.APJD01000009_gene2956	5.372e-202	632.0	COG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2TQWK@28211|Alphaproteobacteria,3JV6C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter family receptor	-	-	-	-	-	-	-	-	-	-	-	-	TctC
SX1_k127_4300933_1	1297865.APJD01000014_gene1017	1.496e-173	544.0	COG0583@1|root,COG0583@2|Bacteria,1MVGZ@1224|Proteobacteria,2U2YJ@28211|Alphaproteobacteria,3JXZV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_4300933_2	1297865.APJD01000014_gene1018	4.128e-91	301.0	COG4125@1|root,COG4125@2|Bacteria,1RHF1@1224|Proteobacteria,2U9K3@28211|Alphaproteobacteria,3JZI9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Chlorhexidine efflux transporter	-	-	-	-	-	-	-	-	-	-	-	-	BTP
SX1_k127_4300933_0	398525.KB900701_gene6038	3.229e-257	795.0	COG0683@1|root,COG0683@2|Bacteria,1R7N5@1224|Proteobacteria,2U443@28211|Alphaproteobacteria,3JXJD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6,TAT_signal
SX1_k127_4300933_3	1297865.APJD01000008_gene5537	2.552e-63	220.0	COG3238@1|root,COG3238@2|Bacteria,1N6ZC@1224|Proteobacteria,2UFXH@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Putative inner membrane exporter, YdcZ	-	-	-	ko:K09936	ko02024,map02024	-	-	-	ko00000,ko00001,ko02000	2.A.7.21	-	-	DMT_YdcZ
SX1_k127_4300933_4	1297865.APJD01000008_gene5538	1.243e-31	123.0	COG2207@1|root,COG2207@2|Bacteria,1QKC9@1224|Proteobacteria,2U0K5@28211|Alphaproteobacteria,3K5XP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,HTH_18
SX1_k127_4303144_1	1297865.APJD01000005_gene3842	6.153e-182	569.0	COG1804@1|root,COG1804@2|Bacteria,1MU2K@1224|Proteobacteria,2TTM5@28211|Alphaproteobacteria,3JR50@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate	frc	-	2.8.3.16	ko:K07749	-	-	-	-	ko00000,ko01000	-	-	-	CoA_transf_3
SX1_k127_4303144_0	1297865.APJD01000005_gene3841	1.75e-204	637.0	COG0625@1|root,COG0625@2|Bacteria,1P71B@1224|Proteobacteria,2U1A5@28211|Alphaproteobacteria,3JXHU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	GST_C_2,GST_N_3
SX1_k127_4303144_2	1297865.APJD01000005_gene3840	8.511e-22	94.0	COG1309@1|root,COG1309@2|Bacteria,1RE2I@1224|Proteobacteria,2U8EP@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_4303707_1	1297865.APJD01000047_gene4823	1.039e-264	816.0	COG0742@1|root,COG0742@2|Bacteria,1MW6A@1224|Proteobacteria,2TQNI@28211|Alphaproteobacteria,3JR22@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	ribosomal rna small subunit methyltransferase	MA20_07810	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4303707_0	1297865.APJD01000047_gene4824	0.0	1108.0	COG0457@1|root,COG4249@1|root,COG0457@2|Bacteria,COG4249@2|Bacteria,1MXFD@1224|Proteobacteria,2TR94@28211|Alphaproteobacteria,3JVC3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14,TPR_1,TPR_16,TPR_2,TPR_8
SX1_k127_4303707_2	1297865.APJD01000047_gene4825	1.543e-47	170.0	COG0620@1|root,COG0620@2|Bacteria,1MV2Z@1224|Proteobacteria,2TSRH@28211|Alphaproteobacteria,3JTC4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Cobalamin-independent synthase, Catalytic domain	MA20_07800	-	2.1.1.14	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	M00017	R04405,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	Meth_synt_2
SX1_k127_4307694_2	1297865.APJD01000003_gene6273	3.47e-117	377.0	COG1853@1|root,COG1853@2|Bacteria,1NESS@1224|Proteobacteria,2U10U@28211|Alphaproteobacteria,3JVHP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Flavin reductase like domain	MA20_04755	-	1.16.8.1,1.5.1.36	ko:K00484,ko:K09024,ko:K13786	ko00240,ko00350,ko00740,ko00860,ko01100,ko01120,ko01220,map00240,map00350,map00740,map00860,map01100,map01120,map01220	-	R02698,R03299,R05218,R05705,R09748,R09750,R09936	RC00046,RC00126,RC01010,RC02732	ko00000,ko00001,ko01000	-	-	-	Flavin_Reduct
SX1_k127_4307694_1	1297865.APJD01000003_gene6274	5.93e-126	405.0	COG0428@1|root,COG0428@2|Bacteria,1R76P@1224|Proteobacteria,2U2BE@28211|Alphaproteobacteria,3JUKQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	transporter	-	-	-	ko:K07238	-	-	-	-	ko00000,ko02000	2.A.5.5	-	-	-
SX1_k127_4307694_0	1297865.APJD01000003_gene6275	0.0	1204.0	COG3284@1|root,COG3284@2|Bacteria,1NRG5@1224|Proteobacteria,2TR0H@28211|Alphaproteobacteria,3JS68@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KQ	Sigma-54 interaction domain	MA20_04760	-	-	ko:K21405	-	-	-	-	ko00000,ko03000	-	-	-	GAF,HTH_8,Sigma54_activat
SX1_k127_4307694_3	1297865.APJD01000003_gene6276	4.974e-109	352.0	COG1523@1|root,COG1523@2|Bacteria,1MU19@1224|Proteobacteria,2TRVS@28211|Alphaproteobacteria,3JR1B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Belongs to the glycosyl hydrolase 13 family	glgX	-	3.2.1.196,3.2.1.68	ko:K01214,ko:K02438	ko00500,ko01100,ko01110,map00500,map01100,map01110	M00565	R02111,R09995,R11261	-	ko00000,ko00001,ko00002,ko01000	-	CBM48,GH13	-	Alpha-amylase,CBM_48
SX1_k127_4312410_2	1297865.APJD01000007_gene1792	4.172e-179	570.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,3JUV3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde dehydrogenase family	MA20_08220	-	-	ko:K22187	ko00040,map00040	-	R11768	RC00080	ko00000,ko00001,ko01000	-	-	-	Aldedh
SX1_k127_4312410_0	1297865.APJD01000007_gene1793	8.914e-306	939.0	COG4948@1|root,COG4948@2|Bacteria,1NAKW@1224|Proteobacteria,2U12J@28211|Alphaproteobacteria,3JTBB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain	gudD	-	4.2.1.40	ko:K01706	ko00053,ko01100,map00053,map01100	-	R02752,R08056	RC00543	ko00000,ko00001,ko01000	-	-	-	MR_MLE_C,MR_MLE_N
SX1_k127_4312410_1	1230476.C207_00218	5.677e-197	616.0	COG0329@1|root,COG0329@2|Bacteria,1MUNF@1224|Proteobacteria,2TS25@28211|Alphaproteobacteria,3JSVG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EM	aldaric acid catabolic process	kdgD	-	4.2.1.41	ko:K01707	ko00053,ko01100,map00053,map01100	-	R02279	RC00678	ko00000,ko00001,ko01000	-	-	-	DHDPS
SX1_k127_4312410_3	1297865.APJD01000007_gene1795	2.784e-165	520.0	COG0583@1|root,COG0583@2|Bacteria,1MXRP@1224|Proteobacteria,2TRVK@28211|Alphaproteobacteria,3JU75@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR family	MA20_08235	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_4327152_4	1297865.APJD01000026_gene2436	3.114e-72	243.0	COG0583@1|root,COG0583@2|Bacteria,1MWVB@1224|Proteobacteria,2TQXV@28211|Alphaproteobacteria,3JTSJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_4327152_5	1297865.APJD01000026_gene2435	3.161e-49	184.0	COG3162@1|root,COG3162@2|Bacteria,1N0Z2@1224|Proteobacteria,2UD8D@28211|Alphaproteobacteria,3K0DB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function, DUF485	-	-	-	-	-	-	-	-	-	-	-	-	DUF485
SX1_k127_4327152_0	1297865.APJD01000026_gene2434	0.0	1006.0	COG4147@1|root,COG4147@2|Bacteria,1MVJ8@1224|Proteobacteria,2TTA4@28211|Alphaproteobacteria,3JT27@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sodium:solute symporter family	-	-	-	ko:K14393	-	-	-	-	ko00000,ko02000	2.A.21.7	-	-	SSF
SX1_k127_4327152_2	1297865.APJD01000026_gene2433	2.158e-272	842.0	COG1207@1|root,COG1207@2|Bacteria,1MUPH@1224|Proteobacteria,2TQPS@28211|Alphaproteobacteria,3JU8H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain	glmU	-	2.3.1.157,2.7.7.23	ko:K04042,ko:K11528	ko00520,ko01100,ko01130,map00520,map01100,map01130	M00362	R00416,R05332	RC00002,RC00004,RC00166	ko00000,ko00001,ko00002,ko01000	-	-	-	Hexapep,NTP_transf_3
SX1_k127_4327152_3	1297865.APJD01000026_gene2432	1.077e-261	815.0	COG3170@1|root,COG3170@2|Bacteria,1MXAS@1224|Proteobacteria,2TSJF@28211|Alphaproteobacteria,3JRYK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	Tfp pilus assembly protein FimV	-	-	-	-	-	-	-	-	-	-	-	-	SPOR
SX1_k127_4327152_1	1297865.APJD01000026_gene2430	1.413e-321	984.0	COG5309@1|root,COG5309@2|Bacteria,1MWJJ@1224|Proteobacteria,2U19Q@28211|Alphaproteobacteria,3JRWW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	beta (1-6) glucans synthase	ndvC	-	3.2.1.58	ko:K01210	ko00500,map00500	-	R00308,R03115	RC00467	ko00000,ko00001,ko01000	-	-	-	Glyco_hydro_17
SX1_k127_4334231_3	1230476.C207_04064	2.857e-201	628.0	COG0144@1|root,COG0144@2|Bacteria,1MWPE@1224|Proteobacteria,2TSIA@28211|Alphaproteobacteria,3JTZG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family	rsmB	-	2.1.1.176	ko:K03500	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltr_RsmB-F,NusB
SX1_k127_4334231_6	1297865.APJD01000019_gene3163	3.712e-37	141.0	COG5508@1|root,COG5508@2|Bacteria,1N7D3@1224|Proteobacteria,2UF8M@28211|Alphaproteobacteria,3K186@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1674)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1674
SX1_k127_4334231_4	1297865.APJD01000019_gene3164	4.712e-107	349.0	COG1525@1|root,COG1525@2|Bacteria,1N0I9@1224|Proteobacteria,2UBYJ@28211|Alphaproteobacteria,3JZ9U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Staphylococcal nuclease homologue	-	-	-	-	-	-	-	-	-	-	-	-	SNase
SX1_k127_4334231_0	1297865.APJD01000019_gene3165	0.0	1536.0	COG4774@1|root,COG4774@2|Bacteria,1MV0X@1224|Proteobacteria,2TVX5@28211|Alphaproteobacteria,3K6QH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SX1_k127_4334231_2	1297865.APJD01000019_gene3166	4.459e-249	770.0	COG3182@1|root,COG3182@2|Bacteria,1MW2S@1224|Proteobacteria,2TSFC@28211|Alphaproteobacteria,3JW59@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PepSY-associated TM region	-	-	-	-	-	-	-	-	-	-	-	-	PepSY_TM
SX1_k127_4334231_7	1297865.APJD01000019_gene3167	8.649e-32	132.0	2DFWR@1|root,2ZTH7@2|Bacteria,1NN42@1224|Proteobacteria,2UJCW@28211|Alphaproteobacteria,3K253@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4334231_5	1297865.APJD01000019_gene3168	6.247e-104	344.0	COG1376@1|root,COG1376@2|Bacteria,1MVYT@1224|Proteobacteria,2U7F8@28211|Alphaproteobacteria,3JTDU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	L,D-transpeptidase catalytic domain	MA20_25100	-	-	-	-	-	-	-	-	-	-	-	YkuD
SX1_k127_4334231_1	1297865.APJD01000019_gene3169	6.752e-268	825.0	COG0365@1|root,COG0365@2|Bacteria,1MUF5@1224|Proteobacteria,2TRKS@28211|Alphaproteobacteria,3JSWQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA	acsA	-	6.2.1.1	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	M00357	R00235,R00236,R00316,R00926,R01354	RC00004,RC00012,RC00043,RC00070,RC02746,RC02816	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACAS_N,AMP-binding,AMP-binding_C
SX1_k127_433576_4	1297865.APJD01000008_gene5597	1.374e-17	82.0	COG1677@1|root,COG1677@2|Bacteria,1QFE1@1224|Proteobacteria,2V5VZ@28211|Alphaproteobacteria,3JZEN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Flagellar hook-basal body complex protein FliE	fliE	-	-	ko:K02408	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FliE
SX1_k127_433576_3	172088.AUGA01000011_gene2664	1.057e-41	156.0	COG1987@1|root,COG1987@2|Bacteria,1N73W@1224|Proteobacteria,2UBX6@28211|Alphaproteobacteria,3JZC2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Role in flagellar biosynthesis	fliQ	-	-	ko:K02420	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2	-	-	Bac_export_3
SX1_k127_433576_2	1297865.APJD01000008_gene5595	7.95e-147	467.0	COG1684@1|root,COG1684@2|Bacteria,1NIF4@1224|Proteobacteria,2TTHN@28211|Alphaproteobacteria,3JVDK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Role in flagellar biosynthesis	fliR	-	-	ko:K02421	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2	-	-	Bac_export_1
SX1_k127_433576_1	1297865.APJD01000008_gene5594	2.943e-220	684.0	COG1377@1|root,COG1377@2|Bacteria,1MUWI@1224|Proteobacteria,2TS13@28211|Alphaproteobacteria,3JRW6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin	flhB	-	-	ko:K02401	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2	-	-	Bac_export_2
SX1_k127_433576_0	1297865.APJD01000008_gene5593	0.0	1253.0	COG0784@1|root,COG4191@1|root,COG0784@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TQQ9@28211|Alphaproteobacteria,3JTUH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	His Kinase A (phosphoacceptor) domain	cckA	-	2.7.13.3	ko:K13587	ko02020,ko04112,map02020,map04112	M00512	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA,PAS,PAS_4,PAS_8,PAS_9,Response_reg
SX1_k127_4363817_2	1297865.APJD01000003_gene6083	3.808e-114	368.0	COG1408@1|root,COG1408@2|Bacteria,1MUH5@1224|Proteobacteria,2U0JR@28211|Alphaproteobacteria,3JWTF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Calcineurin-like phosphoesterase superfamily domain	-	-	-	ko:K07098	-	-	-	-	ko00000	-	-	-	Metallophos,Metallophos_2
SX1_k127_4363817_0	1297865.APJD01000003_gene6082	4.999e-273	842.0	COG0265@1|root,COG0265@2|Bacteria,1MV63@1224|Proteobacteria,2TS54@28211|Alphaproteobacteria,3JSEX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Trypsin	-	-	-	-	-	-	-	-	-	-	-	-	PG_binding_1,Trypsin_2
SX1_k127_4363817_3	1297865.APJD01000003_gene6081	2.139e-48	175.0	2ADBN@1|root,31313@2|Bacteria,1N56U@1224|Proteobacteria,2UDPF@28211|Alphaproteobacteria,3K0UQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4363817_1	1297865.APJD01000003_gene6080	5.091e-143	454.0	COG2515@1|root,COG2515@2|Bacteria,1MVYF@1224|Proteobacteria,2TRCB@28211|Alphaproteobacteria,3JR3N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes a cyclopropane ring-opening reaction, the irreversible conversion of 1-aminocyclopropane-1-carboxylate (ACC) to ammonia and alpha-ketobutyrate. Allows growth on ACC as a nitrogen source	acdS	-	3.5.99.7,4.4.1.15	ko:K01505,ko:K05396	ko00270,map00270	-	R00997,R01874	RC00382,RC00419	ko00000,ko00001,ko01000	-	-	-	PALP
SX1_k127_436620_0	1297865.APJD01000006_gene4374	0.0	1483.0	COG0466@1|root,COG0466@2|Bacteria,1MUV2@1224|Proteobacteria,2U0IK@28211|Alphaproteobacteria,3JTMI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner	MA20_45155	-	3.4.21.53	ko:K01338	ko04112,map04112	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	AAA,LON_substr_bdg,Lon_C
SX1_k127_436620_5	1297865.APJD01000006_gene4375	1.359e-80	271.0	COG0071@1|root,COG0071@2|Bacteria,1N0RH@1224|Proteobacteria,2UE1E@28211|Alphaproteobacteria,3JYYY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Hsp20/alpha crystallin family	MA20_45160	-	-	-	-	-	-	-	-	-	-	-	HSP20
SX1_k127_436620_6	1297865.APJD01000006_gene4376	3.722e-55	194.0	2A6E5@1|root,30V70@2|Bacteria,1N183@1224|Proteobacteria,2UEBX@28211|Alphaproteobacteria,3K0HT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_436620_9	1297865.APJD01000006_gene4377	4.035e-33	133.0	2BUKS@1|root,32PXA@2|Bacteria,1NEHH@1224|Proteobacteria,2UH46@28211|Alphaproteobacteria,3K1MF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_436620_3	1297865.APJD01000006_gene4378	3.013e-192	601.0	COG0329@1|root,COG0329@2|Bacteria,1NVPP@1224|Proteobacteria,2TVEX@28211|Alphaproteobacteria,3JSMF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)	-	-	4.3.3.7	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R10147	RC03062,RC03063	ko00000,ko00001,ko00002,ko01000	-	-	-	DHDPS
SX1_k127_436620_8	1297865.APJD01000006_gene4379	6.147e-48	173.0	2DFR9@1|root,2ZSS2@2|Bacteria,1N34E@1224|Proteobacteria,2UBT9@28211|Alphaproteobacteria,3K07F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_436620_7	1297865.APJD01000006_gene4380	2.194e-52	186.0	2C5RQ@1|root,3023J@2|Bacteria,1NB4R@1224|Proteobacteria,2UFF8@28211|Alphaproteobacteria,3K0WK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_436620_4	1297865.APJD01000006_gene4381	5.807e-95	315.0	299PQ@1|root,2ZWS1@2|Bacteria,1RA8G@1224|Proteobacteria,2U5XI@28211|Alphaproteobacteria,3JYEE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_436620_10	1037409.BJ6T_26380	1.965e-17	85.0	29FC2@1|root,3029R@2|Bacteria,1NGRV@1224|Proteobacteria,2UJN0@28211|Alphaproteobacteria,3K1UJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	F subunit of K+-transporting ATPase (Potass_KdpF)	QU41_31500	-	-	-	-	-	-	-	-	-	-	-	Potass_KdpF
SX1_k127_436620_2	1297865.APJD01000006_gene4385	0.0	1114.0	COG2060@1|root,COG2060@2|Bacteria,1MV1K@1224|Proteobacteria,2TSIJ@28211|Alphaproteobacteria,3JSEK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane	kdpA	GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030955,GO:0031420,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132	3.6.3.12	ko:K01546	ko02020,map02020	-	-	-	ko00000,ko00001,ko01000	3.A.3.7	-	-	KdpA
SX1_k127_436620_1	1297865.APJD01000006_gene4386	0.0	1257.0	COG2216@1|root,COG2216@2|Bacteria,1MU7D@1224|Proteobacteria,2TREM@28211|Alphaproteobacteria,3JQUQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system	kdpB	-	3.6.3.12	ko:K01547	ko02020,map02020	-	-	-	ko00000,ko00001,ko01000	3.A.3.7	-	-	E1-E2_ATPase,Hydrolase
SX1_k127_4367334_5	1297865.APJD01000005_gene3701	2.046e-73	247.0	COG5330@1|root,COG5330@2|Bacteria,1R3VY@1224|Proteobacteria,2TUQ8@28211|Alphaproteobacteria,3JSHG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterised protein conserved in bacteria (DUF2336)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2336
SX1_k127_4367334_1	1297865.APJD01000005_gene3700	2.794e-125	404.0	COG4944@1|root,COG4944@2|Bacteria,1MXEV@1224|Proteobacteria,2TQKY@28211|Alphaproteobacteria,3JUGU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1109)	MA20_15880	-	-	-	-	-	-	-	-	-	-	-	DUF1109
SX1_k127_4367334_2	1297865.APJD01000005_gene3699	4.904e-109	354.0	COG1595@1|root,COG1595@2|Bacteria,1MVS7@1224|Proteobacteria,2U0XJ@28211|Alphaproteobacteria,3JSXU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Belongs to the sigma-70 factor family. ECF subfamily	MA20_15885	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
SX1_k127_4367334_3	1297865.APJD01000005_gene3698	1.119e-107	355.0	2A5MM@1|root,30UCA@2|Bacteria,1Q16S@1224|Proteobacteria,2U0RI@28211|Alphaproteobacteria,3JUXX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4367334_0	1297865.APJD01000005_gene3697	5.806e-158	506.0	COG1024@1|root,COG1024@2|Bacteria,1MWZC@1224|Proteobacteria,2TRYS@28211|Alphaproteobacteria,3JSFG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the enoyl-CoA hydratase isomerase family	MA20_15895	-	4.2.1.17	ko:K01692	ko00071,ko00280,ko00281,ko00310,ko00360,ko00362,ko00380,ko00410,ko00627,ko00640,ko00650,ko00903,ko00930,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00310,map00360,map00362,map00380,map00410,map00627,map00640,map00650,map00903,map00930,map01100,map01110,map01120,map01130,map01212	M00032,M00087	R03026,R03045,R04137,R04170,R04204,R04224,R04738,R04740,R04744,R04746,R04749,R05595,R06411,R06412,R06942,R08093	RC00831,RC00834,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
SX1_k127_4367334_4	1297865.APJD01000005_gene3696	1.395e-104	340.0	COG0427@1|root,COG0427@2|Bacteria,1MUGE@1224|Proteobacteria,2TZDG@28211|Alphaproteobacteria,3JQP8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Acetyl-CoA hydrolase/transferase C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	AcetylCoA_hyd_C
SX1_k127_4371328_0	1297865.APJD01000023_gene1099	1.67e-222	693.0	COG1454@1|root,COG1454@2|Bacteria,1MVPH@1224|Proteobacteria,2TSK0@28211|Alphaproteobacteria,3JUM2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Iron-containing alcohol dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Fe-ADH
SX1_k127_4371328_1	1297865.APJD01000023_gene1100	1.384e-211	659.0	COG2207@1|root,COG2207@2|Bacteria,1NFPK@1224|Proteobacteria,2U1I2@28211|Alphaproteobacteria,3JUC8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	AraC-binding-like domain	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding_2,HTH_18
SX1_k127_437325_1	1297865.APJD01000026_gene2608	2.111e-122	394.0	COG1309@1|root,COG1309@2|Bacteria,1R13H@1224|Proteobacteria,2U3E6@28211|Alphaproteobacteria,3JVTW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_437325_3	1297865.APJD01000026_gene2609	1.301e-31	126.0	2AKWM@1|root,31BQ1@2|Bacteria,1N9RK@1224|Proteobacteria,2UG8K@28211|Alphaproteobacteria,3K19U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_437325_0	1297865.APJD01000026_gene2610	1.924e-151	479.0	COG3148@1|root,COG3148@2|Bacteria,1MZCN@1224|Proteobacteria,2U1C3@28211|Alphaproteobacteria,3JR4C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	DTW	MA20_30020	-	-	ko:K05812	-	-	-	-	ko00000	-	-	-	DTW
SX1_k127_437325_2	1297865.APJD01000026_gene2611	5.251e-49	175.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JU8M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	mdtC	-	-	ko:K07789	ko02020,map02020	M00648	-	-	ko00000,ko00001,ko00002,ko02000	2.A.6.2	-	-	ACR_tran
SX1_k127_4378362_7	172088.AUGA01000027_gene141	9.809e-31	121.0	COG1544@1|root,COG1544@2|Bacteria,1MZHW@1224|Proteobacteria,2TV3J@28211|Alphaproteobacteria,3JRKU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase	hpf	GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:1990904,GO:2000112,GO:2000113	-	ko:K05808	-	-	-	-	ko00000,ko03009	-	-	-	Ribosom_S30AE_C,Ribosomal_S30AE
SX1_k127_4378362_4	398525.KB900701_gene1479	6.203e-88	292.0	COG1762@1|root,COG1762@2|Bacteria,1RD0E@1224|Proteobacteria,2U7B0@28211|Alphaproteobacteria,3JT8F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	GT	PTS IIA-like nitrogen-regulatory protein PtsN	ptsN	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0016020,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0034219,GO:0044424,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090563	-	ko:K02806	ko02060,map02060	-	-	-	ko00000,ko00001,ko01000,ko02000	-	-	-	PTS_EIIA_2
SX1_k127_4378362_3	1297865.APJD01000028_gene5218	1.097e-123	398.0	COG1309@1|root,COG1309@2|Bacteria,1QZIQ@1224|Proteobacteria,2U28R@28211|Alphaproteobacteria,3JWGK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	MA20_24270	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_4378362_2	1297865.APJD01000028_gene5219	1.666e-160	511.0	COG1028@1|root,COG1028@2|Bacteria,1PBCC@1224|Proteobacteria,2U0Z7@28211|Alphaproteobacteria,3JU5W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_4378362_1	1297865.APJD01000028_gene5220	4.13e-249	769.0	COG3268@1|root,COG3268@2|Bacteria,1MVI3@1224|Proteobacteria,2TR30@28211|Alphaproteobacteria,3JV2S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Saccharopine dehydrogenase NADP binding domain	MA20_24260	-	-	-	-	-	-	-	-	-	-	-	Sacchrp_dh_NADP
SX1_k127_4378362_0	1297865.APJD01000028_gene5221	0.0	1047.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JW47@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	MA20_24255	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_4378362_6	1230476.C207_02257	7.092e-51	183.0	2DPXH@1|root,333TM@2|Bacteria,1RHX5@1224|Proteobacteria,2U946@28211|Alphaproteobacteria,3JZSK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4378562_0	1297865.APJD01000004_gene5325	5.23e-233	729.0	COG0473@1|root,COG0473@2|Bacteria,1MUH4@1224|Proteobacteria,2TSBB@28211|Alphaproteobacteria,3JSQT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CE	Isocitrate/isopropylmalate dehydrogenase	ttuC	-	1.1.1.83,1.1.1.93,4.1.1.73	ko:K07246	ko00630,ko00650,map00630,map00650	-	R00215,R01751,R02545,R06180	RC00084,RC00105,RC00594	ko00000,ko00001,ko01000	-	-	-	Iso_dh
SX1_k127_4378562_1	1297865.APJD01000004_gene5324	1.94e-218	679.0	COG2271@1|root,COG2271@2|Bacteria,1MUEK@1224|Proteobacteria,2TS60@28211|Alphaproteobacteria,3JR21@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	-	-	-	ko:K13021	-	-	-	-	ko00000,ko02000	2.A.1.14.3	-	-	MFS_1
SX1_k127_4378766_0	1297865.APJD01000023_gene1127	1.546e-202	631.0	COG0524@1|root,COG0524@2|Bacteria,1MX38@1224|Proteobacteria,2TST9@28211|Alphaproteobacteria,3JV2K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	pfkB family carbohydrate kinase	-	-	2.7.1.4	ko:K00847	ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100	-	R00760,R00867,R03920	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	PfkB
SX1_k127_4378766_1	1230476.C207_06727	1.111e-172	545.0	COG2367@1|root,COG2367@2|Bacteria,1NMW4@1224|Proteobacteria,2TX7R@28211|Alphaproteobacteria,3JSG3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase enzyme family	-	-	3.5.2.6	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	M00627,M00628	R06363	RC01499	ko00000,ko00001,ko00002,ko01000,ko01504	-	-	-	Beta-lactamase2
SX1_k127_4378766_2	1297865.APJD01000023_gene1125	5.697e-33	128.0	COG0583@1|root,COG0583@2|Bacteria,1MWY0@1224|Proteobacteria,2TSD9@28211|Alphaproteobacteria,3JVBA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	ampR	GO:0002791,GO:0002793,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010604,GO:0019219,GO:0019222,GO:0030162,GO:0031323,GO:0031325,GO:0031326,GO:0032268,GO:0032270,GO:0032879,GO:0032880,GO:0032991,GO:0032993,GO:0043455,GO:0043565,GO:0043900,GO:0043901,GO:0044424,GO:0044464,GO:0045862,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050708,GO:0050714,GO:0050789,GO:0050794,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051173,GO:0051222,GO:0051223,GO:0051246,GO:0051247,GO:0051252,GO:0060255,GO:0065007,GO:0070201,GO:0080090,GO:0090087,GO:0097159,GO:0140110,GO:1900190,GO:1900191,GO:1900231,GO:1900232,GO:1900376,GO:1900378,GO:1901363,GO:1903506,GO:1903530,GO:1903532,GO:1904951,GO:2000112,GO:2001141	-	ko:K17850	ko01501,map01501	M00628	-	-	ko00000,ko00001,ko00002,ko03000	-	-	-	HTH_1,LysR_substrate
SX1_k127_4381705_1	1297865.APJD01000011_gene6860	2.383e-209	651.0	COG0007@1|root,COG1648@1|root,COG0007@2|Bacteria,COG1648@2|Bacteria,1MUI0@1224|Proteobacteria,2TRJC@28211|Alphaproteobacteria,3JT91@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme	cobA	-	1.3.1.76,2.1.1.107,4.99.1.4	ko:K02302,ko:K02303	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R02864,R03194,R03947	RC00003,RC00871,RC01012,RC01034	ko00000,ko00001,ko00002,ko01000	-	-	-	CysG_dimeriser,NAD_binding_7,Sirohm_synth_M,TP_methylase
SX1_k127_4381705_2	1297865.APJD01000011_gene6861	3.501e-57	209.0	2EG12@1|root,339T3@2|Bacteria,1Q25W@1224|Proteobacteria,2V64K@28211|Alphaproteobacteria,3K0FW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2849)	MA20_18225	-	-	-	-	-	-	-	-	-	-	-	DUF2849
SX1_k127_4381705_0	1297865.APJD01000011_gene6862	3.652e-266	819.0	COG0155@1|root,COG0155@2|Bacteria,1MVVB@1224|Proteobacteria,2TRCR@28211|Alphaproteobacteria,3JU72@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Nitrite and sulphite reductase 4Fe-4S domain	cysI	-	1.8.1.2	ko:K00381	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00176	R00858	RC00065	ko00000,ko00001,ko00002,ko01000	-	-	-	NIR_SIR,NIR_SIR_ferr
SX1_k127_4383253_8	398525.KB900701_gene1398	1.155e-89	306.0	COG1702@1|root,COG1702@2|Bacteria,1MVDV@1224|Proteobacteria,2TRV3@28211|Alphaproteobacteria,3JS5Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	PhoH-like protein	phoH	-	-	ko:K06217	-	-	-	-	ko00000	-	-	-	PhoH
SX1_k127_4383253_0	1297865.APJD01000033_gene7031	1.047e-300	923.0	COG0621@1|root,COG0621@2|Bacteria,1MURS@1224|Proteobacteria,2TQN6@28211|Alphaproteobacteria,3JQKY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine	miaB	-	2.8.4.3	ko:K06168	-	-	R10645,R10646,R10647	RC00003,RC00980,RC03221,RC03222	ko00000,ko01000,ko03016	-	-	-	Radical_SAM,TRAM,UPF0004
SX1_k127_4383253_2	1297865.APJD01000033_gene7030	1.288e-147	468.0	COG0637@1|root,COG0637@2|Bacteria,1NSPA@1224|Proteobacteria,2U0W3@28211|Alphaproteobacteria,3JT7R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	HAD-hyrolase-like	MA20_23860	-	-	-	-	-	-	-	-	-	-	-	HAD_2
SX1_k127_4383253_7	1297865.APJD01000033_gene7029	1.459e-91	304.0	COG0735@1|root,COG0735@2|Bacteria,1RDWJ@1224|Proteobacteria,2U6ZS@28211|Alphaproteobacteria,3JUS6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the Fur family	fur	-	-	ko:K03711	-	-	-	-	ko00000,ko03000	-	-	-	FUR
SX1_k127_4383253_6	1297865.APJD01000033_gene7028	4.922e-100	332.0	COG0454@1|root,COG0456@2|Bacteria,1RIE6@1224|Proteobacteria,2UF5C@28211|Alphaproteobacteria,3JX20@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FR47-like protein	rimI	-	2.3.1.128	ko:K03789	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Acetyltransf_1,Acetyltransf_10
SX1_k127_4383253_3	1297865.APJD01000033_gene7027	1.132e-142	454.0	COG1214@1|root,COG1214@2|Bacteria,1MXPH@1224|Proteobacteria,2TTM2@28211|Alphaproteobacteria,3JTCP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glycoprotease family	yeaZ	-	2.3.1.234	ko:K01409,ko:K14742	-	-	R10648	RC00070,RC00416	ko00000,ko01000,ko03016	-	-	-	Peptidase_M22
SX1_k127_4383253_4	1297865.APJD01000033_gene7026	7.949e-117	386.0	COG0694@1|root,COG0694@2|Bacteria,1MVQ1@1224|Proteobacteria,2TUD1@28211|Alphaproteobacteria,3JR1N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Scaffold protein Nfu/NifU N terminal	nifU	-	-	-	-	-	-	-	-	-	-	-	Nfu_N,NifU
SX1_k127_4383253_5	172088.AUGA01000027_gene53	1.738e-102	335.0	COG0589@1|root,COG0589@2|Bacteria,1R9XB@1224|Proteobacteria,2U59E@28211|Alphaproteobacteria,3JTIW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Universal stress protein family	MA20_23830	-	-	-	-	-	-	-	-	-	-	-	Usp
SX1_k127_4383253_1	1297865.APJD01000033_gene7024	1.275e-170	536.0	COG0180@1|root,COG0180@2|Bacteria,1MV4T@1224|Proteobacteria,2TQZX@28211|Alphaproteobacteria,3JT4N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Tryptophanyl-tRNA synthetase	trpS	-	6.1.1.2	ko:K01867	ko00970,map00970	M00359,M00360	R03664	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_1b
SX1_k127_4399854_4	1297865.APJD01000003_gene6143	2.341e-75	253.0	COG1846@1|root,COG1846@2|Bacteria,1N0KC@1224|Proteobacteria,2UC6T@28211|Alphaproteobacteria,3JY4P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR_2
SX1_k127_4399854_1	1297865.APJD01000003_gene6144	0.0	1037.0	COG3025@1|root,COG5607@1|root,COG3025@2|Bacteria,COG5607@2|Bacteria,1MY43@1224|Proteobacteria,2TQRV@28211|Alphaproteobacteria,3JTZA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	CYTH	-	-	-	-	-	-	-	-	-	-	-	-	CHAD,CYTH
SX1_k127_4399854_3	1297865.APJD01000003_gene6145	7.451e-247	766.0	COG2271@1|root,COG2271@2|Bacteria,1QU9E@1224|Proteobacteria,2TWHH@28211|Alphaproteobacteria,3JV76@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	MA20_22860	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_4399854_2	1297865.APJD01000003_gene6146	2.371e-281	865.0	COG0189@1|root,COG0189@2|Bacteria,1R70M@1224|Proteobacteria,2TVHR@28211|Alphaproteobacteria,3JT4M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	HJ	ligase activity	-	-	-	-	-	-	-	-	-	-	-	-	ATP-grasp_3
SX1_k127_4399854_0	1297865.APJD01000003_gene6148	0.0	1349.0	COG4206@1|root,COG4206@2|Bacteria,1MW63@1224|Proteobacteria,2TX02@28211|Alphaproteobacteria,3JUXU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SX1_k127_4414753_1	1297865.APJD01000006_gene4424	1.445e-97	319.0	COG0583@1|root,COG0583@2|Bacteria,1N663@1224|Proteobacteria,2TRAK@28211|Alphaproteobacteria,3JUEZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_4414753_2	1297865.APJD01000006_gene4424	9.49e-90	295.0	COG0583@1|root,COG0583@2|Bacteria,1N663@1224|Proteobacteria,2TRAK@28211|Alphaproteobacteria,3JUEZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_4414753_0	1297865.APJD01000006_gene4423	1.813e-168	531.0	COG0451@1|root,COG0451@2|Bacteria,1MWYB@1224|Proteobacteria,2TSDE@28211|Alphaproteobacteria,3JY3E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	GM	NAD(P)H-binding	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase
SX1_k127_4414753_3	1297865.APJD01000006_gene4422	6.698e-59	204.0	2CIT8@1|root,3422K@2|Bacteria,1N6MX@1224|Proteobacteria,2UIJW@28211|Alphaproteobacteria,3K1S7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	DoxX-like family	-	-	-	-	-	-	-	-	-	-	-	-	DoxX_2
SX1_k127_4420634_2	1297865.APJD01000003_gene6245	4.82e-204	640.0	COG3243@1|root,COG3243@2|Bacteria,1MU68@1224|Proteobacteria,2TVC3@28211|Alphaproteobacteria,3JXW3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	COG3243 Poly(3-hydroxyalkanoate) synthetase	-	-	-	ko:K03821	ko00650,map00650	-	R04254	RC00004	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1,PhaC_N
SX1_k127_4420634_6	1297865.APJD01000003_gene6244	6.919e-96	315.0	COG2030@1|root,COG2030@2|Bacteria,1RHPH@1224|Proteobacteria,2U9GG@28211|Alphaproteobacteria,3JY0R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	MaoC like domain	-	-	-	-	-	-	-	-	-	-	-	-	MaoC_dehydratas
SX1_k127_4420634_0	1297865.APJD01000003_gene6243	0.0	1121.0	COG0318@1|root,COG0318@2|Bacteria,1MUMC@1224|Proteobacteria,2TR96@28211|Alphaproteobacteria,3JWZ0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	-	-	6.2.1.48	ko:K00666,ko:K02182	-	-	-	-	ko00000,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_4420634_1	1297865.APJD01000003_gene6242	9.161e-230	716.0	COG2207@1|root,COG2207@2|Bacteria,1RH01@1224|Proteobacteria,2U56K@28211|Alphaproteobacteria,3JWFJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Arabinose-binding domain of AraC transcription regulator, N-term	-	-	-	-	-	-	-	-	-	-	-	-	Arabinose_bd,HTH_18
SX1_k127_4420634_9	1230476.C207_05184	1.134e-35	135.0	2CBGE@1|root,2ZZAR@2|Bacteria,1MZRP@1224|Proteobacteria,2UDHF@28211|Alphaproteobacteria,3K06Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4420634_7	1297865.APJD01000003_gene6240	4.193e-81	273.0	2EAFU@1|root,334J7@2|Bacteria,1N6IT@1224|Proteobacteria,2UE2S@28211|Alphaproteobacteria,3K08S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4420634_4	1297865.APJD01000003_gene6239	9.448e-184	576.0	COG0741@1|root,COG0741@2|Bacteria,1RD96@1224|Proteobacteria,2U8C8@28211|Alphaproteobacteria,3JVIF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Transglycosylase SLT domain	slt	-	-	-	-	-	-	-	-	-	-	-	SLT
SX1_k127_4420634_5	1297865.APJD01000003_gene6238	1.113e-109	356.0	2BY0B@1|root,32R2B@2|Bacteria,1RIX1@1224|Proteobacteria,2U5VZ@28211|Alphaproteobacteria,3JZBV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative bacterial sensory transduction regulator	-	-	-	-	-	-	-	-	-	-	-	-	YbjN
SX1_k127_4420634_3	1297865.APJD01000003_gene6237	1.929e-202	636.0	COG0760@1|root,COG0760@2|Bacteria,1R5NR@1224|Proteobacteria,2TUV1@28211|Alphaproteobacteria,3JSID@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	PPIC-type PPIASE domain	-	-	5.2.1.8	ko:K01802	-	-	-	-	ko00000,ko01000	-	-	-	Rotamase,Rotamase_2
SX1_k127_4420634_8	1297865.APJD01000003_gene6236	6.576e-76	255.0	2CAN2@1|root,32RI0@2|Bacteria,1QW5V@1224|Proteobacteria,2U5R8@28211|Alphaproteobacteria,3JY2K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4425200_2	1297865.APJD01000011_gene6748	6.932e-254	784.0	COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,2TS1R@28211|Alphaproteobacteria,3JSA0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the thiolase family	fadA	GO:0003674,GO:0003824,GO:0003988,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0006725,GO:0006805,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016020,GO:0016042,GO:0016054,GO:0016408,GO:0016740,GO:0016746,GO:0016747,GO:0019395,GO:0019439,GO:0019748,GO:0019752,GO:0030258,GO:0030312,GO:0032787,GO:0033554,GO:0033812,GO:0034440,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044464,GO:0046395,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0071944,GO:0072329,GO:0098754,GO:1901360,GO:1901361,GO:1901575	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
SX1_k127_4425200_0	1297865.APJD01000011_gene6749	0.0	1465.0	COG1024@1|root,COG1250@1|root,COG1024@2|Bacteria,COG1250@2|Bacteria,1MU9P@1224|Proteobacteria,2TS8E@28211|Alphaproteobacteria,3JSUZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	enoyl-CoA hydratase isomerase	fadJ	-	1.1.1.35,4.2.1.17,5.1.2.3	ko:K01782	ko00071,ko00280,ko00281,ko00310,ko00362,ko00380,ko00410,ko00640,ko00650,ko00903,ko00930,ko01040,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00071,map00280,map00281,map00310,map00362,map00380,map00410,map00640,map00650,map00903,map00930,map01040,map01100,map01110,map01120,map01130,map01200,map01212	M00032,M00087	R01975,R03026,R03045,R03276,R04137,R04170,R04203,R04204,R04224,R04737,R04738,R04739,R04740,R04741,R04744,R04745,R04746,R04748,R04749,R05066,R05305,R06411,R06412,R06941,R06942,R07935,R07951,R08093,R08094	RC00029,RC00099,RC00117,RC00241,RC00525,RC00831,RC00834,RC00896,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115	ko00000,ko00001,ko00002,ko01000	-	-	-	3HCDH,3HCDH_N,ECH_1
SX1_k127_4425200_3	172088.AUGA01000001_gene6561	1.175e-148	471.0	COG0625@1|root,COG0625@2|Bacteria,1MY47@1224|Proteobacteria,2TVGA@28211|Alphaproteobacteria,3JR7D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, C-terminal domain	attY	GO:0000302,GO:0003674,GO:0003824,GO:0004364,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0009636,GO:0010035,GO:0016740,GO:0016765,GO:0042221,GO:0042493,GO:0042542,GO:0044424,GO:0044464,GO:0046677,GO:0050896,GO:1901700	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_3,GST_N,GST_N_2,GST_N_3
SX1_k127_4425200_5	1297865.APJD01000011_gene6751	1.227e-106	346.0	COG1846@1|root,COG1846@2|Bacteria,1QASF@1224|Proteobacteria,2TTQH@28211|Alphaproteobacteria,3JQNP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	MarR family	MA20_19890	-	-	-	-	-	-	-	-	-	-	-	MarR_2
SX1_k127_4425200_1	1297865.APJD01000011_gene6752	3.522e-310	949.0	COG3572@1|root,COG3572@2|Bacteria,1MU47@1224|Proteobacteria,2TRPT@28211|Alphaproteobacteria,3JR2Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	glutamate--cysteine ligase	gshA	-	6.3.2.2	ko:K01919	ko00270,ko00480,ko01100,map00270,map00480,map01100	M00118	R00894,R10993	RC00064,RC00090	ko00000,ko00001,ko00002,ko01000	-	-	-	GCS2
SX1_k127_4425200_4	1297865.APJD01000011_gene6753	1.305e-116	376.0	COG3409@1|root,COG3409@2|Bacteria,1QSDM@1224|Proteobacteria,2U4B9@28211|Alphaproteobacteria,3JU8K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	PAN domain	-	-	-	-	-	-	-	-	-	-	-	-	PAN_4
SX1_k127_4425200_6	1297865.APJD01000011_gene6754	1.171e-96	316.0	COG3575@1|root,COG3575@2|Bacteria,1R5GH@1224|Proteobacteria,2U1BS@28211|Alphaproteobacteria,3JS3C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Nucleotidyltransferase	-	-	-	ko:K09962	-	-	-	-	ko00000	-	-	-	NTP_transf_6
SX1_k127_4426680_5	1297865.APJD01000052_gene1196	1.358e-159	506.0	COG0391@1|root,COG0391@2|Bacteria,1NK78@1224|Proteobacteria,2TUUA@28211|Alphaproteobacteria,3JX46@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterised protein family UPF0052	cofD	-	2.7.8.28	ko:K11212	ko00680,ko01120,map00680,map01120	M00378	R09398	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	UPF0052
SX1_k127_4426680_6	1297865.APJD01000052_gene1197	8.209e-159	501.0	COG1478@1|root,COG1478@2|Bacteria,1PQHN@1224|Proteobacteria,2TU1P@28211|Alphaproteobacteria,3JQVJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	F420-0:Gamma-glutamyl ligase	cofE	-	6.3.2.31,6.3.2.34	ko:K12234	ko00680,ko01120,map00680,map01120	M00378	R09399,R09400	RC00064,RC00090,RC00141	ko00000,ko00001,ko00002,ko01000	-	-	-	F420_ligase
SX1_k127_4426680_8	1297865.APJD01000052_gene1198	3.238e-127	410.0	COG2085@1|root,COG2085@2|Bacteria,1MXS0@1224|Proteobacteria,2TS1W@28211|Alphaproteobacteria,3JUCF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	NADP oxidoreductase coenzyme F420-dependent	npdG	-	1.5.1.40	ko:K06988	-	-	-	-	ko00000,ko01000	-	-	-	F420_oxidored
SX1_k127_4426680_4	1297865.APJD01000052_gene1199	6.349e-168	528.0	COG1540@1|root,COG1540@2|Bacteria,1MUYV@1224|Proteobacteria,2TQUC@28211|Alphaproteobacteria,3JXFJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	LamB/YcsF family	ybgL	-	-	ko:K07160	-	-	-	-	ko00000	-	-	-	LamB_YcsF
SX1_k127_4426680_2	1297865.APJD01000052_gene1200	7.764e-241	746.0	COG1171@1|root,COG1171@2|Bacteria,1QTY3@1224|Proteobacteria,2VEUV@28211|Alphaproteobacteria,3JT83@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Pyridoxal-phosphate dependent enzyme	-	-	4.3.1.15	ko:K01751	-	-	-	-	ko00000,ko01000	-	-	-	PALP
SX1_k127_4426680_7	1297865.APJD01000052_gene1201	8.367e-150	477.0	COG2188@1|root,COG2188@2|Bacteria,1MVPT@1224|Proteobacteria,2U13F@28211|Alphaproteobacteria,3JWJG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	UTRA domain	-	-	-	ko:K03710	-	-	-	-	ko00000,ko03000	-	-	-	GntR,UTRA
SX1_k127_4426680_1	1297865.APJD01000052_gene1202	6.017e-263	813.0	COG2080@1|root,COG3427@1|root,COG2080@2|Bacteria,COG3427@2|Bacteria,1MXN3@1224|Proteobacteria,2TUK6@28211|Alphaproteobacteria,3JR1H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Carbon monoxide dehydrogenase subunit G (CoxG)	-	-	1.2.5.3	ko:K03518	-	-	R11168	RC02800	ko00000,ko01000	-	-	-	COXG,Fer2,Fer2_2
SX1_k127_4426680_3	1297865.APJD01000052_gene1203	7.643e-175	566.0	COG1319@1|root,COG1319@2|Bacteria,1N4RF@1224|Proteobacteria,2U27S@28211|Alphaproteobacteria,3JT41@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	FAD binding domain in molybdopterin dehydrogenase	-	-	1.2.5.3	ko:K03519	-	-	R11168	RC02800	ko00000,ko01000	-	-	-	FAD_binding_5
SX1_k127_4426680_0	1297865.APJD01000052_gene1204	2.604e-287	882.0	COG1529@1|root,COG1529@2|Bacteria,1MUEA@1224|Proteobacteria,2TQMW@28211|Alphaproteobacteria,3JSZE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain	-	-	1.2.5.3	ko:K03520	-	-	R11168	RC02800	ko00000,ko01000	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2
SX1_k127_4429741_6	1297865.APJD01000004_gene5314	2.344e-136	434.0	COG2815@1|root,COG4640@1|root,COG2815@2|Bacteria,COG4640@2|Bacteria,1RIP7@1224|Proteobacteria,2UFX8@28211|Alphaproteobacteria,3K2FQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	YARHG	-	-	-	-	-	-	-	-	-	-	-	-	TIR_2,YARHG
SX1_k127_4429741_8	172088.AUGA01000007_gene8307	9.099e-102	334.0	COG3409@1|root,COG3409@2|Bacteria,1R4RS@1224|Proteobacteria,2U0FF@28211|Alphaproteobacteria,3JYB3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	CHAP domain	-	-	-	-	-	-	-	-	-	-	-	-	CHAP
SX1_k127_4429741_3	1297865.APJD01000004_gene5316	9.013e-191	598.0	COG0596@1|root,COG0596@2|Bacteria,1NJ2B@1224|Proteobacteria,2TR54@28211|Alphaproteobacteria,3JQWT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Alpha/beta hydrolase family	MA20_20400	-	3.4.11.5	ko:K01259	ko00330,map00330	-	R00135	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Abhydrolase_1
SX1_k127_4429741_10	224911.27356098	0.0002582	46.0	COG5285@1|root,COG5285@2|Bacteria,1MWD5@1224|Proteobacteria,2U0FP@28211|Alphaproteobacteria,3JQUW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Phytanoyl-CoA dioxygenase (PhyH)	MA20_06795	-	1.14.11.55	ko:K10674	ko00260,ko01120,map00260,map01120	-	R08050	RC00661	ko00000,ko00001,ko01000	-	-	-	PhyH
SX1_k127_4429741_5	1297865.APJD01000004_gene5317	1.979e-139	463.0	COG0500@1|root,COG2226@2|Bacteria,1MVSY@1224|Proteobacteria,2TTNQ@28211|Alphaproteobacteria,3JU9Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	methionine biosynthesis protein (MetW)	metW	-	-	-	-	-	-	-	-	-	-	-	MetW
SX1_k127_4429741_0	1230476.C207_05144	1.494e-261	806.0	COG2021@1|root,COG2021@2|Bacteria,1MVJV@1224|Proteobacteria,2TQYA@28211|Alphaproteobacteria,3JR3E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine	metXA	GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.3.1.31	ko:K00641	ko00270,ko01100,ko01130,map00270,map01100,map01130	-	R01776	RC00004,RC00041	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1
SX1_k127_4429741_4	1297865.APJD01000004_gene5319	1.506e-164	522.0	COG1605@1|root,COG1605@2|Bacteria,1MWTP@1224|Proteobacteria,2TV3Z@28211|Alphaproteobacteria,3JTJ3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Chorismate mutase type II	MA20_20425	-	-	-	-	-	-	-	-	-	-	-	CM_2
SX1_k127_4429741_1	1297865.APJD01000004_gene5320	1.277e-241	746.0	COG0079@1|root,COG0079@2|Bacteria,1MW7I@1224|Proteobacteria,2TQPN@28211|Alphaproteobacteria,3JUTB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily	hisC	-	2.6.1.9	ko:K00817	ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230	M00026	R00694,R00734,R03243	RC00006,RC00888	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
SX1_k127_4429741_2	1297865.APJD01000004_gene5321	3.331e-198	619.0	COG0287@1|root,COG0287@2|Bacteria,1QTZA@1224|Proteobacteria,2TS12@28211|Alphaproteobacteria,3JS3K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Prephenate dehydrogenase	tyrC	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008977,GO:0009058,GO:0009072,GO:0009073,GO:0009095,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019438,GO:0019752,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046983,GO:0047794,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0070403,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.3.1.12,1.3.1.43	ko:K00210,ko:K00220,ko:K04517	ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230	M00025,M00040	R00732,R01728	RC00125	ko00000,ko00001,ko00002,ko01000	-	-	-	PDH
SX1_k127_4429741_7	1297865.APJD01000004_gene5322	3.638e-131	425.0	COG0477@1|root,COG0477@2|Bacteria,1MX9T@1224|Proteobacteria,2U1PD@28211|Alphaproteobacteria,3JXCV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_4432037_3	1038859.AXAU01000001_gene2931	1.354e-10	61.0	COG0174@1|root,COG0174@2|Bacteria,1MUGQ@1224|Proteobacteria,2TSCR@28211|Alphaproteobacteria,3JTH1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	glutamine synthetase	glnA	-	6.3.1.2	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	-	R00253	RC00010,RC02798	ko00000,ko00001,ko01000,ko04147	-	-	-	Gln-synt_C,Gln-synt_N
SX1_k127_4432037_1	196490.AUEZ01000022_gene899	2.047e-63	221.0	COG0347@1|root,COG0347@2|Bacteria,1RGWK@1224|Proteobacteria,2U73Z@28211|Alphaproteobacteria,3JYUA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Belongs to the P(II) protein family	glnB	GO:0003674,GO:0006808,GO:0008150,GO:0030234,GO:0050789,GO:0050790,GO:0065007,GO:0065009,GO:0098772	-	ko:K04751	ko02020,map02020	-	-	-	ko00000,ko00001	-	-	-	P-II
SX1_k127_4432037_0	1297865.APJD01000020_gene124	2.89e-317	972.0	COG0062@1|root,COG0063@1|root,COG0062@2|Bacteria,COG0063@2|Bacteria,1MU1Q@1224|Proteobacteria,2TT58@28211|Alphaproteobacteria,3JU34@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration	nnrD	-	-	-	-	-	-	-	-	-	-	-	Carb_kinase,YjeF_N
SX1_k127_4432037_2	1297865.APJD01000020_gene125	1.745e-39	148.0	COG0454@1|root,COG0456@2|Bacteria,1N891@1224|Proteobacteria,2U6U9@28211|Alphaproteobacteria,3JZ6N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10,Acetyltransf_7
SX1_k127_4432253_0	1429916.X566_00735	9.328e-189	593.0	COG4227@1|root,COG4227@2|Bacteria,1MU8I@1224|Proteobacteria,2TRIT@28211|Alphaproteobacteria,3JR5I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Domain of unknown function (DUF1738)	ardC	-	-	-	-	-	-	-	-	-	-	-	DUF1738
SX1_k127_4432253_1	1429916.X566_00740	6.918e-157	497.0	28M6F@1|root,2ZAK3@2|Bacteria,1QRV5@1224|Proteobacteria,2TTG0@28211|Alphaproteobacteria,3JWMJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4432253_2	1429916.X566_00750	5.743e-109	352.0	28IFN@1|root,2Z8HC@2|Bacteria,1PQ6C@1224|Proteobacteria,2U2GK@28211|Alphaproteobacteria,3JRXH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4432518_1	1297865.APJD01000006_gene4443	9.515e-209	651.0	COG1593@1|root,COG1593@2|Bacteria,1MUQE@1224|Proteobacteria,2TSSE@28211|Alphaproteobacteria,3JR24@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Malonyl-CoA decarboxylase	MA20_01120	-	4.1.1.9	ko:K01578	ko00410,ko00640,ko01100,ko04146,ko04152,map00410,map00640,map01100,map04146,map04152	-	R00233	RC00040	ko00000,ko00001,ko01000	-	-	-	MCD,MCD_N
SX1_k127_4432518_2	1230476.C207_05705	3.697e-158	500.0	COG1917@1|root,COG2207@1|root,COG1917@2|Bacteria,COG2207@2|Bacteria,1P1FH@1224|Proteobacteria,2TRGB@28211|Alphaproteobacteria,3JRPR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	AraC-like ligand binding domain	MA20_01125	-	-	-	-	-	-	-	-	-	-	-	AraC_binding,HTH_18
SX1_k127_4432518_0	1230476.C207_05704	3.89e-239	744.0	COG2271@1|root,COG2271@2|Bacteria,1NJTU@1224|Proteobacteria,2TUBJ@28211|Alphaproteobacteria,3JU19@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	MA20_01130	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_4432518_3	1297865.APJD01000006_gene4446	2.712e-154	493.0	COG0834@1|root,COG0834@2|Bacteria,1N2RR@1224|Proteobacteria,2U0AF@28211|Alphaproteobacteria,3JUWS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	ET	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K02030	-	M00236	-	-	ko00000,ko00002,ko02000	3.A.1.3	-	-	SBP_bac_3
SX1_k127_4433975_3	1297865.APJD01000010_gene4870	3.419e-136	434.0	COG1802@1|root,COG1802@2|Bacteria,1N7GE@1224|Proteobacteria,2U49F@28211|Alphaproteobacteria,3JX9F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FCD	-	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SX1_k127_4433975_2	1297865.APJD01000010_gene4871	2.245e-151	481.0	COG4126@1|root,COG4126@2|Bacteria,1MVNB@1224|Proteobacteria,2TQQI@28211|Alphaproteobacteria,3JT9U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Asp/Glu/Hydantoin racemase	-	-	-	-	-	-	-	-	-	-	-	-	Asp_Glu_race
SX1_k127_4433975_0	1297865.APJD01000010_gene4872	2.07e-314	972.0	COG0044@1|root,COG0044@2|Bacteria,1MW10@1224|Proteobacteria,2TSQH@28211|Alphaproteobacteria,3JTGE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Function of homologous gene experimentally demonstrated in an other organism	-	-	3.5.2.2	ko:K01464	ko00240,ko00410,ko00770,ko00983,ko01100,map00240,map00410,map00770,map00983,map01100	M00046	R02269,R03055,R08227	RC00632,RC00680	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Amidohydro_1,Urease_alpha
SX1_k127_4433975_1	1297865.APJD01000010_gene4873	1.709e-198	620.0	COG0596@1|root,COG0596@2|Bacteria,1NJ2B@1224|Proteobacteria,2TR54@28211|Alphaproteobacteria,3JQWT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
SX1_k127_4433975_4	1297865.APJD01000010_gene4874	1.138e-18	85.0	COG0746@1|root,COG0746@2|Bacteria,1RH3M@1224|Proteobacteria,2TV2G@28211|Alphaproteobacteria,3JT8E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor	mobA	-	2.7.7.77	ko:K03752	ko00790,ko01100,map00790,map01100	-	R11581	-	ko00000,ko00001,ko01000	-	-	-	NTP_transf_3
SX1_k127_4446107_0	1297865.APJD01000011_gene6744	0.0	2093.0	COG0790@1|root,COG0790@2|Bacteria,1MWPA@1224|Proteobacteria,2TR2B@28211|Alphaproteobacteria,3JRS2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Sel1-like repeats.	-	-	-	ko:K07126,ko:K13582	ko04112,map04112	-	-	-	ko00000,ko00001	-	-	-	PG_binding_1,Sel1
SX1_k127_4446107_1	1230476.C207_03102	7.934e-118	381.0	COG1695@1|root,COG1695@2|Bacteria,1RFWJ@1224|Proteobacteria,2TR93@28211|Alphaproteobacteria,3JREX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Virulence activator alpha C-term	MA20_19850	-	-	-	-	-	-	-	-	-	-	-	PadR,Vir_act_alpha_C
SX1_k127_4446107_3	1297865.APJD01000011_gene6746	6.254e-88	291.0	COG3631@1|root,COG3631@2|Bacteria,1RHRD@1224|Proteobacteria,2U9AT@28211|Alphaproteobacteria,3JYWT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SnoaL-like domain	MA20_19855	-	-	-	-	-	-	-	-	-	-	-	SnoaL_2
SX1_k127_4446107_2	1297865.APJD01000011_gene6747	2.817e-113	367.0	COG1960@1|root,COG1960@2|Bacteria,1MU20@1224|Proteobacteria,2TQJS@28211|Alphaproteobacteria,3JUYV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase N terminal	MA20_19860	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_C,Acyl-CoA_dh_M,Acyl-CoA_dh_N,AcylCoA_DH_N
SX1_k127_4450422_0	1297865.APJD01000015_gene3445	6.97e-214	666.0	COG1960@1|root,COG1960@2|Bacteria,1NQAE@1224|Proteobacteria,2U0TJ@28211|Alphaproteobacteria,3JTKC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	acyl-CoA dehydrogenase	MA20_40065	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_N
SX1_k127_4450422_1	1297865.APJD01000015_gene3446	1.815e-90	298.0	COG1414@1|root,COG1414@2|Bacteria,1RFSY@1224|Proteobacteria,2U3M4@28211|Alphaproteobacteria,3JZH2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	IclR helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_IclR,IclR
SX1_k127_4450928_4	883080.HMPREF9697_03926	9.838e-112	361.0	COG0553@1|root,COG0827@1|root,COG4646@1|root,COG0553@2|Bacteria,COG0827@2|Bacteria,COG4646@2|Bacteria,1PGZG@1224|Proteobacteria,2TVEU@28211|Alphaproteobacteria,3JVU9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DEAD-like helicases superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Helicase_C,N6_Mtase,ResIII,SNF2_N
SX1_k127_4450928_0	883080.HMPREF9697_03926	0.0	2119.0	COG0553@1|root,COG0827@1|root,COG4646@1|root,COG0553@2|Bacteria,COG0827@2|Bacteria,COG4646@2|Bacteria,1PGZG@1224|Proteobacteria,2TVEU@28211|Alphaproteobacteria,3JVU9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DEAD-like helicases superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Helicase_C,N6_Mtase,ResIII,SNF2_N
SX1_k127_4450928_2	883080.HMPREF9697_03925	1.903e-129	414.0	28M5I@1|root,2ZAJA@2|Bacteria,1R4JP@1224|Proteobacteria,2U05N@28211|Alphaproteobacteria,3JW0Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1419)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1419
SX1_k127_4450928_10	883080.HMPREF9697_03924	1.082e-08	59.0	2BVGN@1|root,32QVF@2|Bacteria,1N2J6@1224|Proteobacteria,2UC53@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4450928_3	883080.HMPREF9697_03924	1.367e-117	387.0	2BVGN@1|root,32QVF@2|Bacteria,1N2J6@1224|Proteobacteria,2UC53@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4450928_7	883080.HMPREF9697_03923	4.636e-69	236.0	2BXJY@1|root,32R1H@2|Bacteria,1R6DI@1224|Proteobacteria,2U5TS@28211|Alphaproteobacteria,3JYDY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4450928_1	883080.HMPREF9697_03922	3.324e-185	591.0	COG4643@1|root,COG4643@2|Bacteria,1Q8J5@1224|Proteobacteria,2U153@28211|Alphaproteobacteria,3JU1P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3991)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3991,Toprim_2
SX1_k127_4450928_9	1297865.APJD01000051_gene6882	1.89e-17	87.0	2EBH9@1|root,335HS@2|Bacteria,1N7PX@1224|Proteobacteria,2UFFE@28211|Alphaproteobacteria,3K0ZS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4450928_5	754035.Mesau_00923	4.477e-98	326.0	COG2135@1|root,COG2135@2|Bacteria,1RAJW@1224|Proteobacteria,2U6M5@28211|Alphaproteobacteria,43P2I@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	S	Belongs to the SOS response-associated peptidase family	-	-	-	-	-	-	-	-	-	-	-	-	SRAP
SX1_k127_4450928_6	883080.HMPREF9697_03979	1.035e-82	277.0	COG3916@1|root,COG3916@2|Bacteria,1MXFA@1224|Proteobacteria,2U30F@28211|Alphaproteobacteria,3JSIE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	QT	Autoinducer	mrlI	-	2.3.1.228,2.3.1.229	ko:K18096	ko02024,map02024	-	-	-	ko00000,ko00001,ko01000	-	-	-	Autoind_synth
SX1_k127_4455260_4	1297865.APJD01000011_gene6550	6.228e-134	427.0	COG1116@1|root,COG1116@2|Bacteria,1MUIM@1224|Proteobacteria,2TRHM@28211|Alphaproteobacteria,3JQMP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ATPases associated with a variety of cellular activities	-	-	-	ko:K02049	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	ABC_tran
SX1_k127_4455260_2	1297865.APJD01000011_gene6551	4.157e-150	488.0	COG0600@1|root,COG0600@2|Bacteria,1MVAE@1224|Proteobacteria,2TSP5@28211|Alphaproteobacteria,3JS67@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Binding-protein-dependent transport system inner membrane component	MA20_40340	-	-	ko:K02050	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	BPD_transp_1
SX1_k127_4455260_1	1297865.APJD01000011_gene6552	2.096e-209	651.0	COG1052@1|root,COG1052@2|Bacteria,1MU2D@1224|Proteobacteria,2TTJV@28211|Alphaproteobacteria,3JR7H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	D-isomer specific 2-hydroxyacid dehydrogenase	MA20_40345	-	-	-	-	-	-	-	-	-	-	-	2-Hacid_dh,2-Hacid_dh_C
SX1_k127_4455260_3	1297865.APJD01000011_gene6553	7.843e-148	478.0	293Y3@1|root,2ZRD4@2|Bacteria,1MW85@1224|Proteobacteria,2TR4S@28211|Alphaproteobacteria,3JVEE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protease inhibitor Inh	MA20_40350	-	-	-	-	-	-	-	-	-	-	-	Inh
SX1_k127_4455260_6	1297865.APJD01000011_gene6554	2.864e-73	247.0	COG3795@1|root,COG3795@2|Bacteria,1RH6U@1224|Proteobacteria,2U5GH@28211|Alphaproteobacteria,3JY8B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	YCII-related domain	-	-	-	-	-	-	-	-	-	-	-	-	YCII
SX1_k127_4455260_7	172088.AUGA01000040_gene5042	3.877e-68	231.0	COG3795@1|root,COG3795@2|Bacteria,1NUVF@1224|Proteobacteria,2URRF@28211|Alphaproteobacteria,3K3VS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	YCII-related domain	-	-	-	-	-	-	-	-	-	-	-	-	YCII
SX1_k127_4455260_0	1297865.APJD01000011_gene6556	6.118e-274	846.0	COG4941@1|root,COG4941@2|Bacteria,1MU3D@1224|Proteobacteria,2TSNH@28211|Alphaproteobacteria,3JWFT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Sigma-70 region 2	-	-	-	-	-	-	-	-	-	-	-	-	Sigma70_r2,Sigma70_r4_2
SX1_k127_4455260_5	1297865.APJD01000011_gene6557	2.853e-76	257.0	2C945@1|root,32W5M@2|Bacteria,1RFGX@1224|Proteobacteria,2U8ZD@28211|Alphaproteobacteria,3JYPA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	5.4.4.1	ko:K01865	ko00627,ko01120,map00627,map01120	-	-	-	ko00000,ko00001,ko01000	-	-	-	-
SX1_k127_4460943_6	1297865.APJD01000011_gene6574	5.496e-29	121.0	COG0596@1|root,COG0596@2|Bacteria,1MWT6@1224|Proteobacteria,2TSCE@28211|Alphaproteobacteria,3JUJZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
SX1_k127_4460943_4	1297865.APJD01000011_gene6573	8.866e-178	558.0	COG2220@1|root,COG2220@2|Bacteria,1NVME@1224|Proteobacteria,2U180@28211|Alphaproteobacteria,3JRGV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Beta-lactamase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_3
SX1_k127_4460943_5	1297865.APJD01000011_gene6572	8.133e-91	300.0	COG0789@1|root,COG0789@2|Bacteria,1N9C6@1224|Proteobacteria,2UC87@28211|Alphaproteobacteria,3K16A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Transcriptional regulator MerR family	-	-	-	-	-	-	-	-	-	-	-	-	MerR,MerR-DNA-bind,MerR_1
SX1_k127_4460943_1	1297865.APJD01000011_gene6571	2.351e-268	829.0	COG0477@1|root,COG0477@2|Bacteria,1MWXZ@1224|Proteobacteria,2TT27@28211|Alphaproteobacteria,3JVI0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_4460943_2	1297865.APJD01000011_gene6570	6.374e-231	740.0	COG3618@1|root,COG3618@2|Bacteria,1MVG0@1224|Proteobacteria,2TRU9@28211|Alphaproteobacteria,3JVRE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Amidohydrolase	-	-	-	ko:K07046	ko00051,ko01120,map00051,map01120	-	R10689	RC00537	ko00000,ko00001,ko01000	-	-	-	Amidohydro_2
SX1_k127_4460943_3	1230476.C207_05945	2.597e-188	591.0	COG0454@1|root,COG0456@2|Bacteria,1PVAE@1224|Proteobacteria,2V4H8@28211|Alphaproteobacteria,3JWQJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FR47-like protein	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
SX1_k127_4460943_0	1297865.APJD01000011_gene6568	1.038e-291	896.0	COG2309@1|root,COG2309@2|Bacteria,1MW2Y@1224|Proteobacteria,2TSGB@28211|Alphaproteobacteria,3JTH5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Thermophilic metalloprotease (M29)	ampS	-	-	ko:K19689	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M29
SX1_k127_4461682_1	1297865.APJD01000035_gene5471	1.461e-27	111.0	COG1451@1|root,COG1451@2|Bacteria,1MXZU@1224|Proteobacteria,2U1JG@28211|Alphaproteobacteria,3JSR0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function DUF45	MA20_23375	-	-	ko:K07043	-	-	-	-	ko00000	-	-	-	DUF45
SX1_k127_4461682_2	224911.27348962	1.373e-06	57.0	COG2050@1|root,COG2050@2|Bacteria,1R5RX@1224|Proteobacteria,2U1DZ@28211|Alphaproteobacteria,3JVKP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Thioesterase-like superfamily	MA20_24410	-	-	-	-	-	-	-	-	-	-	-	4HBT_3
SX1_k127_4461682_0	1297865.APJD01000035_gene5472	2.552e-279	859.0	COG0744@1|root,COG0744@2|Bacteria,1QTST@1224|Proteobacteria,2TQQ8@28211|Alphaproteobacteria,3JR5K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Penicillin-binding Protein	pbpC	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly,Transpeptidase
SX1_k127_4483194_0	1297865.APJD01000006_gene4480	1.467e-170	536.0	COG0354@1|root,COG0354@2|Bacteria,1N852@1224|Proteobacteria,2TR8J@28211|Alphaproteobacteria,3JV0A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the GcvT family	ygfZ	-	-	ko:K06980	-	-	-	-	ko00000,ko03016	-	-	-	GCV_T,GCV_T_C
SX1_k127_4483194_1	1230476.C207_05666	9.19e-134	434.0	COG2818@1|root,COG2818@2|Bacteria,1R9X5@1224|Proteobacteria,2TUP5@28211|Alphaproteobacteria,3JR51@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	glycosylase i	tag	-	3.2.2.20	ko:K01246	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Adenine_glyco
SX1_k127_4483194_2	1297865.APJD01000006_gene4478	3.629e-86	295.0	COG1896@1|root,COG1896@2|Bacteria,1RACF@1224|Proteobacteria,2TUK3@28211|Alphaproteobacteria,3JS9G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metal dependent phosphohydrolases with conserved 'HD' motif.	MA20_42120	-	-	ko:K06952	-	-	-	-	ko00000	-	-	-	HD,HD_3
SX1_k127_4486097_3	1297865.APJD01000006_gene4429	9.644e-58	202.0	COG0535@1|root,COG0535@2|Bacteria,1N7TR@1224|Proteobacteria,2UFAS@28211|Alphaproteobacteria,3JZD3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	peptidyl-tyrosine modification	pqqD	-	-	ko:K06138	-	-	-	-	ko00000	-	-	-	PqqD
SX1_k127_4486097_0	1297865.APJD01000006_gene4428	2.937e-274	846.0	COG0535@1|root,COG0535@2|Bacteria,1MUQP@1224|Proteobacteria,2TTS5@28211|Alphaproteobacteria,3JS8R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	biosynthesis protein E	pqqE	-	-	ko:K06139	-	-	-	-	ko00000	-	-	-	Fer4_12,Radical_SAM,SPASM
SX1_k127_4486097_2	316056.RPC_3668	2.387e-149	481.0	COG2267@1|root,COG2267@2|Bacteria,1QU3E@1224|Proteobacteria,2TVXS@28211|Alphaproteobacteria,3JRB5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Serine aminopeptidase, S33	pip	-	3.4.11.5,3.5.1.101	ko:K01259,ko:K18457	ko00330,map00330	-	R00135	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Abhydrolase_1
SX1_k127_4486097_1	1297865.APJD01000006_gene4426	2.658e-152	482.0	COG1376@1|root,COG1376@2|Bacteria,1R4G7@1224|Proteobacteria,2U17V@28211|Alphaproteobacteria,3JV3J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	L,D-transpeptidase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	TAT_signal,YkuD
SX1_k127_4486097_4	319003.Bra1253DRAFT_08165	2.199e-47	179.0	2BS8K@1|root,32MA3@2|Bacteria,1N16Q@1224|Proteobacteria,2UBRY@28211|Alphaproteobacteria,3K0T4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4498420_0	1297865.APJD01000023_gene1153	3.053e-278	858.0	COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,1R5P9@1224|Proteobacteria,2U0GE@28211|Alphaproteobacteria,3JS2C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	DM	protein involved in exopolysaccharide biosynthesis	-	-	-	ko:K16554	ko05111,map05111	-	-	-	ko00000,ko00001,ko02000	8.A.3.1	-	-	AAA_31,GNVR,Wzz
SX1_k127_4498420_1	1297865.APJD01000023_gene1152	1.716e-268	830.0	COG2244@1|root,COG2244@2|Bacteria,1MXTA@1224|Proteobacteria,2TSNJ@28211|Alphaproteobacteria,3JVHK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Polysaccharide biosynthesis C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_synt,Polysacc_synt_C
SX1_k127_4498420_2	1297865.APJD01000023_gene1151	7.482e-261	808.0	COG0654@1|root,COG0654@2|Bacteria,1MUEW@1224|Proteobacteria,2TUIB@28211|Alphaproteobacteria,3JU6H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	FAD binding domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3
SX1_k127_4498420_3	1297865.APJD01000023_gene1150	4.924e-243	751.0	COG5653@1|root,COG5653@2|Bacteria,1R68D@1224|Proteobacteria,2TSSF@28211|Alphaproteobacteria,3JU2A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_6
SX1_k127_4498420_4	1297865.APJD01000023_gene1149	1.376e-176	561.0	COG1922@1|root,COG1922@2|Bacteria,1N1HD@1224|Proteobacteria,2TSBS@28211|Alphaproteobacteria,3JTQA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the glycosyltransferase 26 family	MA20_06090	-	2.4.1.187	ko:K05946	ko05111,map05111	-	-	-	ko00000,ko00001,ko01000,ko01003	-	GT26	-	Glyco_tran_WecB
SX1_k127_4498420_5	1297865.APJD01000023_gene1148	5.833e-42	154.0	COG0402@1|root,COG0402@2|Bacteria,1MX34@1224|Proteobacteria,2U0IN@28211|Alphaproteobacteria,3JVRN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Amidohydrolase family	-	-	3.5.4.1	ko:K01485	ko00240,ko00330,ko01100,map00240,map00330,map01100	-	R00974,R01411,R02922	RC00074,RC00514,RC00809	ko00000,ko00001,ko01000	-	-	-	Amidohydro_1,Amidohydro_3,MGS
SX1_k127_450376_0	1297865.APJD01000003_gene6381	8.024e-321	983.0	COG0554@1|root,COG0554@2|Bacteria,1MUP7@1224|Proteobacteria,2TRD7@28211|Alphaproteobacteria,3JSAS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate	glpK	GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615	2.7.1.30	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626	-	R00847	RC00002,RC00017	ko00000,ko00001,ko01000,ko04147	-	-	-	FGGY_C,FGGY_N
SX1_k127_450376_4	1297865.APJD01000003_gene6380	1.244e-199	626.0	COG2755@1|root,COG2755@2|Bacteria,1MWPZ@1224|Proteobacteria,2TSYR@28211|Alphaproteobacteria,3JQZT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	GDSL-like Lipase/Acylhydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
SX1_k127_450376_6	1297865.APJD01000003_gene6379	1.496e-158	504.0	COG2755@1|root,COG2755@2|Bacteria,1R505@1224|Proteobacteria,2TT25@28211|Alphaproteobacteria,3JQYE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	lipolytic protein G-D-S-L family	-	-	-	-	-	-	-	-	-	-	-	-	Lipase_GDSL_2
SX1_k127_450376_1	1297865.APJD01000003_gene6378	2.689e-272	842.0	COG4645@1|root,COG4645@2|Bacteria,1PI9Q@1224|Proteobacteria,2U1C7@28211|Alphaproteobacteria,3JQY7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	OpgC protein	MA20_22360	-	-	-	-	-	-	-	-	-	-	-	OpgC_C
SX1_k127_450376_7	1297865.APJD01000003_gene6377	6.551e-87	292.0	COG2967@1|root,COG2967@2|Bacteria,1MZ2Z@1224|Proteobacteria,2U9JM@28211|Alphaproteobacteria,3JY59@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ApaG domain	apaG	-	-	ko:K06195	-	-	-	-	ko00000	-	-	-	DUF525
SX1_k127_450376_3	1297865.APJD01000003_gene6376	1.349e-217	675.0	COG1281@1|root,COG1281@2|Bacteria,1MUMU@1224|Proteobacteria,2TTUR@28211|Alphaproteobacteria,3JTPI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress	hslO	-	-	ko:K04083	-	-	-	-	ko00000,ko03110	-	-	-	HSP33
SX1_k127_450376_5	1297865.APJD01000003_gene6375	5.606e-197	634.0	COG0078@1|root,COG0078@2|Bacteria,1MUFM@1224|Proteobacteria,2TR81@28211|Alphaproteobacteria,3JS5V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline	argF	GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.1.3.3	ko:K00611	ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230	M00029,M00844	R01398	RC00096	ko00000,ko00001,ko00002,ko01000	-	-	-	OTCace,OTCace_N
SX1_k127_450376_2	1297865.APJD01000003_gene6374	9.586e-262	807.0	COG4992@1|root,COG4992@2|Bacteria,1MV3C@1224|Proteobacteria,2TSGT@28211|Alphaproteobacteria,3JRG7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Aminotransferase class-III	argD	GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363	2.6.1.11,2.6.1.17	ko:K00821	ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00028,M00845	R02283,R04475	RC00006,RC00062	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3
SX1_k127_450376_8	172088.AUGA01000007_gene8505	1.016e-56	207.0	COG5352@1|root,COG5352@2|Bacteria,1RHI6@1224|Proteobacteria,2TS7F@28211|Alphaproteobacteria,3JSUB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	GcrA cell cycle regulator	gcrA	-	-	ko:K13583	ko04112,map04112	-	-	-	ko00000,ko00001	-	-	-	GcrA
SX1_k127_450506_2	1297865.APJD01000023_gene1034	1.082e-141	454.0	COG3004@1|root,COG3004@2|Bacteria,1MW15@1224|Proteobacteria,2TSI5@28211|Alphaproteobacteria,3JX2W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	) H( ) antiporter that extrudes sodium in exchange for external protons	nhaA	-	-	ko:K03313	-	-	-	-	ko00000,ko02000	2.A.33.1	-	-	Na_H_antiport_1
SX1_k127_450506_3	1297865.APJD01000023_gene1035	9.846e-128	410.0	2DKJK@1|root,309QV@2|Bacteria,1NQG1@1224|Proteobacteria,2UND5@28211|Alphaproteobacteria,3K3XE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PEP-CTERM motif	-	-	-	-	-	-	-	-	-	-	-	-	VPEP
SX1_k127_450506_0	1297865.APJD01000023_gene1036	2.314e-320	989.0	COG0165@1|root,COG0165@2|Bacteria,1QX0N@1224|Proteobacteria,2U2RV@28211|Alphaproteobacteria,3K3XU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Argininosuccinate lyase C-terminal	-	-	-	-	-	-	-	-	-	-	-	-	ASL_C2,Lyase_1
SX1_k127_450506_1	1297865.APJD01000023_gene1037	1.057e-240	748.0	COG0683@1|root,COG0683@2|Bacteria,1MXR4@1224|Proteobacteria,2TU0F@28211|Alphaproteobacteria,3JUD2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_4509457_5	1297865.APJD01000003_gene6093	1.465e-31	123.0	COG1011@1|root,COG1011@2|Bacteria,1Q69X@1224|Proteobacteria,2TTTP@28211|Alphaproteobacteria,3JTMD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Haloacid dehalogenase-like hydrolase	MA20_23095	-	-	ko:K07025	-	-	-	-	ko00000	-	-	-	HAD_2
SX1_k127_4509457_4	1297865.APJD01000003_gene6092	1.327e-52	187.0	2AEF6@1|root,314A6@2|Bacteria,1N9N4@1224|Proteobacteria,2UCWT@28211|Alphaproteobacteria,3K1B8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4509457_1	398525.KB900701_gene1947	5.092e-198	619.0	COG0714@1|root,COG0714@2|Bacteria,1MV5I@1224|Proteobacteria,2TREB@28211|Alphaproteobacteria,3JRBD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	AAA domain (dynein-related subfamily)	MA20_34740	-	-	-	-	-	-	-	-	-	-	-	AAA_5
SX1_k127_4509457_0	1297865.APJD01000003_gene6090	9.182e-288	885.0	COG3552@1|root,COG3552@2|Bacteria,1MUHH@1224|Proteobacteria,2U05M@28211|Alphaproteobacteria,3JS6A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	VWA domain containing CoxE-like protein	MA20_34745	-	-	ko:K07161	-	-	-	-	ko00000	-	-	-	VWA_CoxE
SX1_k127_4509457_2	1297865.APJD01000003_gene6089	2.554e-103	338.0	2BSW2@1|root,32MZP@2|Bacteria,1RB9B@1224|Proteobacteria,2U6KN@28211|Alphaproteobacteria,3JY2P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4509457_3	1297865.APJD01000003_gene6088	2.576e-88	291.0	COG3673@1|root,COG3673@2|Bacteria,1NFRW@1224|Proteobacteria,2TQTY@28211|Alphaproteobacteria,3JQQX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized alpha/beta hydrolase domain (DUF2235)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2235
SX1_k127_4510866_4	1297865.APJD01000005_gene3884	1.064e-177	556.0	COG0657@1|root,COG0657@2|Bacteria,1MV3J@1224|Proteobacteria,2TUQ3@28211|Alphaproteobacteria,3JW6A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	alpha/beta hydrolase fold	-	-	3.5.1.9	ko:K01432	ko00380,ko00630,ko01100,map00380,map00630,map01100	M00038	R00988,R01959,R04911	RC00263,RC00323	ko00000,ko00001,ko00002,ko01000	-	-	-	Abhydrolase_3
SX1_k127_4510866_7	1297865.APJD01000005_gene3883	1.442e-97	321.0	COG1846@1|root,COG1846@2|Bacteria,1MZE9@1224|Proteobacteria,2TSUB@28211|Alphaproteobacteria,3JQPR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	MA20_38125	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SX1_k127_4510866_2	1297865.APJD01000005_gene3882	2.413e-250	779.0	COG0683@1|root,COG0683@2|Bacteria,1MVV2@1224|Proteobacteria,2TRFU@28211|Alphaproteobacteria,3JT1D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	MA20_38130	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_4510866_6	1297865.APJD01000005_gene3881	1.359e-100	331.0	COG1917@1|root,COG1917@2|Bacteria,1PJ5Y@1224|Proteobacteria,2TVK5@28211|Alphaproteobacteria,3K6KQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Cupin	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
SX1_k127_4510866_1	1297865.APJD01000005_gene3880	2.958e-278	855.0	COG0654@1|root,COG0654@2|Bacteria,1MXEW@1224|Proteobacteria,2TRRC@28211|Alphaproteobacteria,3JV1F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	MA20_38140	-	1.14.13.218	ko:K20940	ko00405,ko01130,map00405,map01130	M00835	-	-	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_3
SX1_k127_4510866_8	1297865.APJD01000005_gene3879	1.033e-79	267.0	COG0251@1|root,COG0251@2|Bacteria,1RHSP@1224|Proteobacteria,2U9A9@28211|Alphaproteobacteria,3JYDU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Endoribonuclease L-PSP	-	-	3.5.99.10	ko:K09022	-	-	R11098,R11099	RC03275,RC03354	ko00000,ko01000	-	-	-	Ribonuc_L-PSP
SX1_k127_4510866_3	1297865.APJD01000005_gene3878	3.167e-178	573.0	COG1024@1|root,COG1024@2|Bacteria,1MXHV@1224|Proteobacteria,2TTEG@28211|Alphaproteobacteria,3JVV9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	MA20_38145	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_4510866_5	1297865.APJD01000005_gene3877	8.392e-151	484.0	COG1028@1|root,COG1028@2|Bacteria,1MUS7@1224|Proteobacteria,2TTYG@28211|Alphaproteobacteria,3JVR1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Belongs to the short-chain dehydrogenases reductases (SDR) family	bdh	-	-	-	-	-	-	-	-	-	-	-	adh_short,adh_short_C2
SX1_k127_4510866_0	1297865.APJD01000005_gene3876	0.0	1561.0	COG0654@1|root,COG1902@1|root,COG0654@2|Bacteria,COG1902@2|Bacteria,1MVE0@1224|Proteobacteria,2TQPY@28211|Alphaproteobacteria,3JRQ8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NADH:flavin oxidoreductase / NADH oxidase family	-	-	1.14.13.40	ko:K09461	ko00627,ko01120,map00627,map01120	-	R03998,R03999	RC00244	ko00000,ko00001,ko01000	-	-	-	FAD_binding_3,NAD_binding_8,Oxidored_FMN
SX1_k127_4512146_3	1297865.APJD01000005_gene3498	1.623e-180	566.0	COG0346@1|root,COG0346@2|Bacteria,1MXZ4@1224|Proteobacteria,2TUBZ@28211|Alphaproteobacteria,3JR1S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glyoxalase-like domain	MA20_16915	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase,Glyoxalase_3,Glyoxalase_4
SX1_k127_4512146_6	1297865.APJD01000005_gene3499	5.425e-133	426.0	COG1309@1|root,COG1309@2|Bacteria,1R5AI@1224|Proteobacteria,2U7HG@28211|Alphaproteobacteria,3JTCA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	MA20_16910	-	-	ko:K09017	-	-	-	-	ko00000,ko03000	-	-	-	TetR_C_3,TetR_C_9,TetR_N
SX1_k127_4512146_5	1297865.APJD01000005_gene3500	3.465e-168	529.0	COG0600@1|root,COG0600@2|Bacteria,1MVAE@1224|Proteobacteria,2VF1T@28211|Alphaproteobacteria,3JUMS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Binding-protein-dependent transport system inner membrane component	MA20_16905	-	-	ko:K02050	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	BPD_transp_1
SX1_k127_4512146_2	1297865.APJD01000005_gene3501	6.514e-207	661.0	COG0715@1|root,COG0715@2|Bacteria,1MVRA@1224|Proteobacteria,2VF1U@28211|Alphaproteobacteria,3JSBZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NMT1/THI5 like	MA20_16900	-	-	ko:K02051	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	NMT1
SX1_k127_4512146_4	1297865.APJD01000005_gene3502	1.506e-179	562.0	COG1116@1|root,COG1116@2|Bacteria,1MUIM@1224|Proteobacteria,2TRHM@28211|Alphaproteobacteria,3JUE4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ATPases associated with a variety of cellular activities	MA20_16895	-	-	ko:K02049	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	ABC_tran
SX1_k127_4512146_0	1297865.APJD01000005_gene3503	2.504e-315	965.0	COG4948@1|root,COG4948@2|Bacteria,1MV2S@1224|Proteobacteria,2TTFB@28211|Alphaproteobacteria,3JTFN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Mandelate Racemase Muconate Lactonizing	-	-	-	-	-	-	-	-	-	-	-	-	MR_MLE_C
SX1_k127_4512146_1	1297865.APJD01000005_gene3504	3.342e-262	809.0	COG0673@1|root,COG0673@2|Bacteria,1PYTN@1224|Proteobacteria,2TS0G@28211|Alphaproteobacteria,3JQM5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Oxidoreductase family, NAD-binding Rossmann fold	MA20_16885	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
SX1_k127_4512146_7	1297865.APJD01000005_gene3505	8.632e-66	227.0	COG0329@1|root,COG0329@2|Bacteria,1MV7E@1224|Proteobacteria,2TTT5@28211|Alphaproteobacteria,3JUG4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EM	Protein of unknown function (DUF993)	MA20_16880	-	-	-	-	-	-	-	-	-	-	-	DUF993
SX1_k127_4516436_0	1297865.APJD01000003_gene6184	8.979e-299	916.0	COG1109@1|root,COG1109@2|Bacteria,1MUA5@1224|Proteobacteria,2TRIJ@28211|Alphaproteobacteria,3JTAW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	phosphoglucomutase phosphomannomutase alpha beta alpha domain I	algC	-	5.4.2.2,5.4.2.8	ko:K15778	ko00010,ko00030,ko00051,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	M00114	R00959,R01057,R01818,R08639	RC00408	ko00000,ko00001,ko00002,ko01000	-	-	-	PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV
SX1_k127_4516436_3	1297865.APJD01000003_gene6185	3.179e-99	325.0	COG1522@1|root,COG1522@2|Bacteria,1RDB3@1224|Proteobacteria,2U580@28211|Alphaproteobacteria,3JVRV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	transcriptional regulator, AsnC family	MA20_21975	-	-	ko:K05800	-	-	-	-	ko00000,ko03000	-	-	-	AsnC_trans_reg,HTH_24,HTH_AsnC-type
SX1_k127_4516436_2	1297865.APJD01000003_gene6186	2.304e-203	636.0	COG0524@1|root,COG0524@2|Bacteria,1MWX4@1224|Proteobacteria,2VF16@28211|Alphaproteobacteria,3JV89@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Belongs to the carbohydrate kinase PfkB family	-	-	-	-	-	-	-	-	-	-	-	-	PfkB
SX1_k127_4516436_1	1297865.APJD01000003_gene6187	2.309e-215	668.0	COG2816@1|root,COG2816@2|Bacteria,1QGCX@1224|Proteobacteria,2TVMG@28211|Alphaproteobacteria,3JUTY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	NADH pyrophosphatase-like rudimentary NUDIX domain	nudC	-	3.6.1.22	ko:K03426	ko00760,ko01100,ko04146,map00760,map01100,map04146	-	R00103,R03004,R11104	RC00002	ko00000,ko00001,ko01000	-	-	-	NUDIX,NUDIX-like,zf-NADH-PPase
SX1_k127_4516436_4	1297865.APJD01000003_gene6188	2.126e-88	291.0	COG0537@1|root,COG0537@2|Bacteria,1MZVD@1224|Proteobacteria,2UC00@28211|Alphaproteobacteria,3JY2G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	FG	HIT domain	MA20_21960	-	-	-	-	-	-	-	-	-	-	-	HIT
SX1_k127_4516436_6	266834.SMc02904	1.123e-09	61.0	COG0537@1|root,COG0537@2|Bacteria,1MZVD@1224|Proteobacteria,2UC00@28211|Alphaproteobacteria,4BE8T@82115|Rhizobiaceae	28211|Alphaproteobacteria	FG	Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases	MA20_21960	-	-	-	-	-	-	-	-	-	-	-	HIT
SX1_k127_4516436_5	1297865.APJD01000003_gene6189	2.464e-46	173.0	COG2812@1|root,COG2812@2|Bacteria,1MVCK@1224|Proteobacteria,2TRPB@28211|Alphaproteobacteria,3JS32@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity	dnaX	-	2.7.7.7	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_delta2,DNA_pol3_gamma3,DUF3646
SX1_k127_4524345_8	504832.OCAR_7686	4.531e-72	248.0	2ECJU@1|root,336HY@2|Bacteria,1REDG@1224|Proteobacteria,2U7ZM@28211|Alphaproteobacteria,3JYZ0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4524345_3	883080.HMPREF9697_03974	2.464e-102	336.0	2FCUV@1|root,344XT@2|Bacteria,1R985@1224|Proteobacteria,2U1QG@28211|Alphaproteobacteria,3JSFT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4524345_5	883080.HMPREF9697_03973	1.874e-96	321.0	COG1525@1|root,COG1525@2|Bacteria,1RBYY@1224|Proteobacteria,2U67Z@28211|Alphaproteobacteria,3JYHY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Staphylococcal nuclease homologue	-	-	-	-	-	-	-	-	-	-	-	-	SNase
SX1_k127_4524345_9	883080.HMPREF9697_03972	1.092e-64	226.0	COG0629@1|root,COG0629@2|Bacteria,1RGKI@1224|Proteobacteria,2U8I4@28211|Alphaproteobacteria,3JYYF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Single-strand binding protein family	-	-	-	-	-	-	-	-	-	-	-	-	SSB
SX1_k127_4524345_6	504832.OCAR_7690	6.531e-86	292.0	COG1525@1|root,COG1525@2|Bacteria,1RI82@1224|Proteobacteria,2U9NI@28211|Alphaproteobacteria,3JXH4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	nuclease	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4524345_7	883080.HMPREF9697_03970	6.441e-76	259.0	2ED15@1|root,336Y3@2|Bacteria,1NAPB@1224|Proteobacteria,2UF6B@28211|Alphaproteobacteria,3K1FN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4524345_4	883080.HMPREF9697_03969	2.632e-99	329.0	COG0741@1|root,COG0741@2|Bacteria,1MZ4X@1224|Proteobacteria,2TQTD@28211|Alphaproteobacteria,3JWNB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Transglycosylase SLT domain	-	-	-	-	-	-	-	-	-	-	-	-	SLT
SX1_k127_4524345_11	323097.Nham_4447	3.058e-46	168.0	COG3838@1|root,COG3838@2|Bacteria,1NJ0X@1224|Proteobacteria,2UJTF@28211|Alphaproteobacteria,3JZZ1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	TrbC/VIRB2 family	virB2	-	-	ko:K03197	ko03070,ko05134,map03070,map05134	M00333	-	-	ko00000,ko00001,ko00002,ko02044	3.A.7	-	-	TrbC
SX1_k127_4524345_10	323097.Nham_4446	1.984e-52	193.0	COG3702@1|root,COG3702@2|Bacteria,1RGVU@1224|Proteobacteria,2VGS9@28211|Alphaproteobacteria,3JZRY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Type IV secretory pathway, VirB3-like protein	-	-	-	ko:K03198	ko03070,map03070	M00333	-	-	ko00000,ko00001,ko00002,ko02044	3.A.7	-	-	VirB3
SX1_k127_4524345_0	504832.OCAR_7695	0.0	1552.0	COG3451@1|root,COG3451@2|Bacteria,1MXH0@1224|Proteobacteria,2TR1U@28211|Alphaproteobacteria,3JRFT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	component of type IV transporter system	virB4	-	-	ko:K03199	ko03070,map03070	M00333	-	-	ko00000,ko00001,ko00002,ko02044	3.A.7	-	-	CagE_TrbE_VirB
SX1_k127_4524345_2	504832.OCAR_7696	1.578e-117	389.0	2FGDE@1|root,3489K@2|Bacteria,1R96B@1224|Proteobacteria,2U4A7@28211|Alphaproteobacteria,3JWDC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4524345_1	323097.Nham_4443	4.93e-119	391.0	29I1K@1|root,304YP@2|Bacteria,1RG48@1224|Proteobacteria,2U0N8@28211|Alphaproteobacteria,3JUBT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Type IV secretion system proteins	-	-	-	-	-	-	-	-	-	-	-	-	T4SS
SX1_k127_4524345_13	504832.OCAR_7699	1.618e-21	98.0	29UZT@1|root,30GCU@2|Bacteria,1P8X7@1224|Proteobacteria,2UY0Z@28211|Alphaproteobacteria,3K5E2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4524345_12	323097.Nham_4441	9.071e-24	101.0	COG3704@1|root,COG3704@2|Bacteria,1MW0K@1224|Proteobacteria,2U4UI@28211|Alphaproteobacteria,3K5VF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	TrbL/VirB6 plasmid conjugal transfer protein	-	-	-	ko:K03201	ko03070,map03070	M00333	-	-	ko00000,ko00001,ko00002,ko02044	3.A.7	-	-	TrbL
SX1_k127_4525080_2	1297865.APJD01000007_gene1902	1.419e-196	615.0	COG0501@1|root,COG0501@2|Bacteria,1MUV4@1224|Proteobacteria,2TS3N@28211|Alphaproteobacteria,3JTMB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Belongs to the peptidase M48B family	htpX	-	-	ko:K03799	-	M00743	-	-	ko00000,ko00002,ko01000,ko01002	-	-	-	Peptidase_M48
SX1_k127_4525080_0	1297865.APJD01000007_gene1901	0.0	1060.0	COG4191@1|root,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TQQ9@28211|Alphaproteobacteria,3JR0R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Response regulator receiver	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS,PAS_3,PAS_4,Response_reg
SX1_k127_4525080_1	1297865.APJD01000007_gene1900	1.352e-281	869.0	COG2951@1|root,COG3409@1|root,COG2951@2|Bacteria,COG3409@2|Bacteria,1MUZ3@1224|Proteobacteria,2TRP0@28211|Alphaproteobacteria,3JRXG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Transglycosylase SLT domain	MA20_44755	-	-	ko:K08305	-	-	-	-	ko00000,ko01000,ko01011	-	GH103	-	PG_binding_1,SLT_2
SX1_k127_4541349_1	1297865.APJD01000012_gene1313	3.595e-104	338.0	COG5394@1|root,COG5394@2|Bacteria,1RHRC@1224|Proteobacteria,2TQWQ@28211|Alphaproteobacteria,3JS9S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Polyhydroxyalkanoate synthesis repressor	phaR	-	-	-	-	-	-	-	-	-	-	-	PHB_acc,PHB_acc_N
SX1_k127_4541349_0	1297865.APJD01000012_gene1312	0.0	1604.0	COG2207@1|root,COG2421@1|root,COG2207@2|Bacteria,COG2421@2|Bacteria,1MXKY@1224|Proteobacteria,2TSAU@28211|Alphaproteobacteria,3JSW9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CK	Acetamidase/Formamidase family	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding_2,FmdA_AmdA,HTH_18
SX1_k127_4541349_2	398525.KB900701_gene1241	1.309e-17	85.0	COG2421@1|root,COG2421@2|Bacteria,1MXKY@1224|Proteobacteria,2TSAU@28211|Alphaproteobacteria,3JSW9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CK	Acetamidase/Formamidase family	MA20_29860	-	-	-	-	-	-	-	-	-	-	-	AraC_binding_2,FmdA_AmdA,HTH_18
SX1_k127_4543581_9	1297865.APJD01000014_gene1016	1.003e-150	477.0	COG4221@1|root,COG4221@2|Bacteria,1MV0A@1224|Proteobacteria,2TRAN@28211|Alphaproteobacteria,3JVXB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	KR domain	rbtD	-	1.1.1.56	ko:K00039	ko00040,ko01100,map00040,map01100	-	R01895	RC00102	ko00000,ko00001,ko01000	-	-	-	adh_short
SX1_k127_4543581_1	1297865.APJD01000014_gene1015	2.487e-249	771.0	COG2199@1|root,COG2199@2|Bacteria,1PQK4@1224|Proteobacteria,2TSC7@28211|Alphaproteobacteria,3JV2P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Diguanylate cyclase, GGDEF domain	-	-	-	-	-	-	-	-	-	-	-	-	CHASE4,GGDEF
SX1_k127_4543581_6	1297865.APJD01000014_gene1014	6.374e-177	557.0	COG2746@1|root,COG2746@2|Bacteria,1R68C@1224|Proteobacteria,2U1PM@28211|Alphaproteobacteria,3K1MD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Aminoglycoside 3-N-acetyltransferase	-	-	2.3.1.81	ko:K00662	-	-	-	-	ko00000,ko01000,ko01504	-	-	-	Antibiotic_NAT
SX1_k127_4543581_3	1297865.APJD01000014_gene1013	2.467e-218	679.0	COG1253@1|root,COG1253@2|Bacteria,1N0IQ@1224|Proteobacteria,2UPHQ@28211|Alphaproteobacteria,3K350@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function DUF21	-	-	-	-	-	-	-	-	-	-	-	-	DUF21
SX1_k127_4543581_10	1297865.APJD01000014_gene1012	5.78e-133	426.0	COG1309@1|root,COG1309@2|Bacteria,1R67Z@1224|Proteobacteria,2TUIS@28211|Alphaproteobacteria,3JTC6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_4543581_11	1297865.APJD01000014_gene1011	3.012e-116	374.0	COG1765@1|root,COG1765@2|Bacteria,1MWPR@1224|Proteobacteria,2U1VW@28211|Alphaproteobacteria,3JSE0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	OsmC-like protein	-	-	-	-	-	-	-	-	-	-	-	-	OsmC
SX1_k127_4543581_2	172088.AUGA01000051_gene3405	3.205e-221	689.0	COG1960@1|root,COG1960@2|Bacteria,1NDQ8@1224|Proteobacteria,2TU2G@28211|Alphaproteobacteria,3JQUK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_N
SX1_k127_4543581_5	1297865.APJD01000014_gene1008	5.656e-195	608.0	COG2897@1|root,COG2897@2|Bacteria,1MW4B@1224|Proteobacteria,2U2DD@28211|Alphaproteobacteria,3JT18@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rhodanese Homology Domain	-	-	2.8.1.1,2.8.1.2	ko:K01011	ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122	-	R01931,R03105,R03106	RC00214	ko00000,ko00001,ko01000	-	-	-	Rhodanese
SX1_k127_4543581_0	1297865.APJD01000014_gene1007	1.066e-309	949.0	COG0715@1|root,COG0715@2|Bacteria,1MWDN@1224|Proteobacteria,2TS0X@28211|Alphaproteobacteria,3JRD6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NMT1-like family	nrtA	-	-	ko:K15576	ko00910,ko02010,map00910,map02010	M00438	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.16.1,3.A.1.16.2	-	-	NMT1_2
SX1_k127_4543581_7	1297865.APJD01000014_gene1006	2.792e-170	535.0	COG0600@1|root,COG0600@2|Bacteria,1MU6Q@1224|Proteobacteria,2TQT6@28211|Alphaproteobacteria,3JQVS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	nitrate ABC transporter	nrtB	-	-	ko:K02050,ko:K15577	ko00910,ko02010,map00910,map02010	M00188,M00438	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.16,3.A.1.16.1,3.A.1.16.2,3.A.1.17	-	-	BPD_transp_1
SX1_k127_4543581_4	1297865.APJD01000014_gene1005	1.305e-196	624.0	COG1116@1|root,COG1116@2|Bacteria,1MUDV@1224|Proteobacteria,2TUIC@28211|Alphaproteobacteria,3JW0U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ATPases associated with a variety of cellular activities	cmpD	-	-	ko:K02049,ko:K15578	ko00910,ko02010,map00910,map02010	M00188,M00438	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.16,3.A.1.16.1,3.A.1.17	-	-	ABC_tran
SX1_k127_4543581_12	1297865.APJD01000014_gene1004	1.506e-104	339.0	COG1513@1|root,COG1513@2|Bacteria,1R9X0@1224|Proteobacteria,2TQYR@28211|Alphaproteobacteria,3JV0D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide	cynS	-	4.2.1.104	ko:K01725	ko00910,map00910	-	R03546,R10079	RC00952	ko00000,ko00001,ko01000	-	-	-	Cyanate_lyase
SX1_k127_4543581_8	1297865.APJD01000014_gene1003	3.508e-156	493.0	COG0015@1|root,COG0015@2|Bacteria,1MV4B@1224|Proteobacteria,2TQUE@28211|Alphaproteobacteria,3JVZZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Adenylosuccinate lyase C-terminus	-	-	-	-	-	-	-	-	-	-	-	-	ADSL_C,Lyase_1
SX1_k127_4550865_0	1297865.APJD01000003_gene6078	1.376e-231	720.0	COG1652@1|root,COG1652@2|Bacteria,1MWMR@1224|Proteobacteria,2U7UH@28211|Alphaproteobacteria,3JTC2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	Lysin motif	lysM	-	-	-	-	-	-	-	-	-	-	-	LysM
SX1_k127_4550865_6	1297865.APJD01000003_gene6077	1.549e-152	486.0	COG2755@1|root,COG2755@2|Bacteria	2|Bacteria	E	lipolytic protein G-D-S-L family	-	-	3.1.6.14,3.2.1.21	ko:K01137,ko:K05349	ko00460,ko00500,ko00531,ko00940,ko01100,ko01110,ko04142,map00460,map00500,map00531,map00940,map01100,map01110,map04142	M00078,M00079	R00026,R02558,R02887,R02985,R03527,R04949,R04998,R07808,R07819,R10035,R10039,R10040	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko00002,ko01000	-	GH3	-	Lipase_GDSL_2
SX1_k127_4550865_3	1297865.APJD01000003_gene6075	7.064e-178	557.0	COG0846@1|root,COG0846@2|Bacteria,1MUK1@1224|Proteobacteria,2TV1Q@28211|Alphaproteobacteria,3JRAH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form	-	-	-	-	-	-	-	-	-	-	-	-	SIR2
SX1_k127_4550865_8	1297865.APJD01000003_gene6074	2.39e-57	203.0	2A7R3@1|root,30WPW@2|Bacteria,1REIF@1224|Proteobacteria,2U7I5@28211|Alphaproteobacteria,3JZDS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_26595	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4550865_9	1297865.APJD01000003_gene6073	5.543e-50	183.0	COG0851@1|root,COG0851@2|Bacteria,1N6QD@1224|Proteobacteria,2UF6R@28211|Alphaproteobacteria,3JZC7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell	minE	-	-	ko:K03608	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	MinE
SX1_k127_4550865_4	1297865.APJD01000003_gene6072	7.6e-165	520.0	COG2894@1|root,COG2894@2|Bacteria,1MUEU@1224|Proteobacteria,2TSAG@28211|Alphaproteobacteria,3JTQF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Cellulose biosynthesis protein BcsQ	minD	-	-	ko:K03609	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	AAA_31,CbiA
SX1_k127_4550865_7	1297865.APJD01000003_gene6071	2.636e-139	444.0	COG0850@1|root,COG0850@2|Bacteria,1RHVN@1224|Proteobacteria,2TUYE@28211|Alphaproteobacteria,3JTKE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization	minC	-	-	ko:K03610	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	MinC_C,MinC_N
SX1_k127_4550865_2	1297865.APJD01000003_gene6070	1.962e-196	613.0	COG0583@1|root,COG0583@2|Bacteria,1MW16@1224|Proteobacteria,2TRIG@28211|Alphaproteobacteria,3JXP0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_4550865_5	1297865.APJD01000003_gene6069	6.444e-160	518.0	COG0596@1|root,COG0596@2|Bacteria,1P6EB@1224|Proteobacteria,2TXDP@28211|Alphaproteobacteria,3K6Z5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Serine aminopeptidase, S33	-	-	-	ko:K19707	-	-	-	-	ko00000,ko03021	-	-	-	Abhydrolase_1,Abhydrolase_6
SX1_k127_4559636_2	316056.RPC_0055	1.585e-82	282.0	COG0300@1|root,COG0300@2|Bacteria,1RG9T@1224|Proteobacteria,2TW0V@28211|Alphaproteobacteria,3JS8Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	MA20_25205	-	-	ko:K07124	-	-	-	-	ko00000	-	-	-	adh_short
SX1_k127_4559636_3	113395.AXAI01000010_gene2224	2.223e-38	148.0	COG0824@1|root,COG0824@2|Bacteria,1MZPN@1224|Proteobacteria,2UCYR@28211|Alphaproteobacteria,3JY0U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Thioesterase-like superfamily	MA20_18720	-	3.1.2.23	ko:K01075	ko00130,ko00362,ko01100,ko01110,ko01120,map00130,map00362,map01100,map01110,map01120	-	R01301	RC00004,RC00174	ko00000,ko00001,ko01000	-	-	-	4HBT,4HBT_2
SX1_k127_4559636_0	1121033.AUCF01000016_gene5481	2.097e-96	322.0	COG1028@1|root,COG1028@2|Bacteria,1MUBQ@1224|Proteobacteria,2TRPN@28211|Alphaproteobacteria,2JQN4@204441|Rhodospirillales	204441|Rhodospirillales	IQ	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_4559636_1	1121033.AUCF01000016_gene5480	2.83e-91	307.0	COG0318@1|root,COG0318@2|Bacteria,1MUQZ@1224|Proteobacteria,2TRV7@28211|Alphaproteobacteria,2JPYI@204441|Rhodospirillales	204441|Rhodospirillales	IQ	AMP-binding enzyme	-	-	6.2.1.34	ko:K12508	-	-	-	-	ko00000,ko01000	-	-	-	AMP-binding
SX1_k127_4567633_5	1297865.APJD01000007_gene2293	6.856e-218	676.0	COG0683@1|root,COG0683@2|Bacteria,1MWNB@1224|Proteobacteria,2TTAH@28211|Alphaproteobacteria,3JRRZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	MA20_26550	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_4567633_1	1297865.APJD01000007_gene2294	0.0	1197.0	COG0559@1|root,COG4177@1|root,COG0559@2|Bacteria,COG4177@2|Bacteria,1MY1E@1224|Proteobacteria,2TTC6@28211|Alphaproteobacteria,3JSJ8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	MA20_26555	-	-	ko:K01997,ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_4567633_8	1297865.APJD01000007_gene2295	1.462e-164	526.0	COG0411@1|root,COG0411@2|Bacteria,1MUTY@1224|Proteobacteria,2TR6T@28211|Alphaproteobacteria,3JR59@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid ATP-binding cassette transporter	MA20_26560	-	-	ko:K01995	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_4567633_9	1297865.APJD01000007_gene2296	9.828e-146	471.0	COG0410@1|root,COG0410@2|Bacteria,1MUR3@1224|Proteobacteria,2TSWQ@28211|Alphaproteobacteria,3JTDN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ATPases associated with a variety of cellular activities	MA20_26565	-	-	ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran
SX1_k127_4567633_11	1230476.C207_06164	2.243e-86	287.0	COG1846@1|root,COG1846@2|Bacteria,1N0MG@1224|Proteobacteria,2UDDI@28211|Alphaproteobacteria,3JYI4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	MA20_26570	-	-	ko:K22296	-	-	-	-	ko00000,ko03000	-	-	-	MarR,MarR_2
SX1_k127_4567633_3	1297865.APJD01000007_gene2298	1.715e-264	815.0	COG0402@1|root,COG0402@2|Bacteria,1MVMR@1224|Proteobacteria,2U0AM@28211|Alphaproteobacteria,3JTUD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Amidohydrolase family	MA20_26585	-	3.5.2.18	ko:K15358	ko00760,ko01120,map00760,map01120	-	R07984	RC01933	ko00000,ko00001,ko01000	-	-	-	Amidohydro_1
SX1_k127_4567633_6	1297865.APJD01000007_gene2299	4.99e-169	532.0	COG0543@1|root,COG0543@2|Bacteria,1QTSK@1224|Proteobacteria,2TQNB@28211|Alphaproteobacteria,3JQTJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	Oxidoreductase NAD-binding domain	fpr	-	1.18.1.2,1.19.1.1	ko:K00528	-	-	R10159	-	ko00000,ko01000	-	-	-	FAD_binding_6,NAD_binding_1
SX1_k127_4567633_7	1297865.APJD01000007_gene2300	1.036e-168	536.0	COG3258@1|root,COG3258@2|Bacteria,1MXB0@1224|Proteobacteria,2TTDW@28211|Alphaproteobacteria,3JT60@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Thiosulfate-oxidizing multienzyme system protein SoxA	-	-	-	ko:K17222	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	-	-	-	-
SX1_k127_4567633_14	1297865.APJD01000007_gene2301	7.349e-59	219.0	COG5501@1|root,COG5501@2|Bacteria,1N03V@1224|Proteobacteria,2TWQY@28211|Alphaproteobacteria,3JZTG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sulphur oxidation protein SoxZ	MA20_17515	-	-	ko:K17227	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	-	-	-	SoxZ
SX1_k127_4567633_10	1297865.APJD01000007_gene2302	2.299e-91	301.0	COG5501@1|root,COG5501@2|Bacteria,1RH4J@1224|Proteobacteria,2U72E@28211|Alphaproteobacteria,3JUV9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sulfur oxidation protein SoxY	MA20_17510	-	-	ko:K17226	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	-	-	-	SoxY
SX1_k127_4567633_12	1297865.APJD01000007_gene2303	3.107e-85	284.0	COG2010@1|root,COG2010@2|Bacteria,1RIV2@1224|Proteobacteria,2U9C5@28211|Alphaproteobacteria,3JZ5J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome c	-	-	-	ko:K17223	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	-	-	-	Cytochrom_C
SX1_k127_4567633_4	1297865.APJD01000007_gene2304	2.453e-260	805.0	COG0446@1|root,COG0446@2|Bacteria,1N5MC@1224|Proteobacteria,2TT55@28211|Alphaproteobacteria,3JTFD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Flavocytochrome c sulphide dehydrogenase, flavin-binding	fccB	-	1.8.2.3,1.8.5.4	ko:K17218,ko:K17229	ko00920,ko01120,map00920,map01120	-	R09499,R10152	RC03155	ko00000,ko00001,ko01000	-	-	-	FCSD-flav_bind,Pyr_redox_2
SX1_k127_4567633_0	1297865.APJD01000007_gene2305	0.0	1494.0	COG1529@1|root,COG1529@2|Bacteria,1QTTJ@1224|Proteobacteria,2TQVK@28211|Alphaproteobacteria,3JSW3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain	MA20_17495	-	1.3.99.16	ko:K07303	-	-	-	-	ko00000,ko01000	-	-	-	Ald_Xan_dh_C2
SX1_k127_4567633_13	1502851.FG93_05708	6.779e-59	208.0	COG2080@1|root,COG2080@2|Bacteria,1RD8C@1224|Proteobacteria,2U6Z6@28211|Alphaproteobacteria,3JQR4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	[2Fe-2S] binding domain	MA20_17490	-	1.3.99.16	ko:K07302	-	-	-	-	ko00000,ko01000	-	-	-	Fer2,Fer2_2
SX1_k127_4567633_2	1297865.APJD01000007_gene2307	7.245e-295	909.0	COG0477@1|root,COG0477@2|Bacteria,1MWUR@1224|Proteobacteria,2TT7N@28211|Alphaproteobacteria,3JU94@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	MA20_17480	-	-	ko:K08169	-	-	-	-	ko00000,ko02000	2.A.1.3.17	-	-	MFS_1
SX1_k127_4573685_1	1297865.APJD01000011_gene6536	3.113e-187	586.0	COG1752@1|root,COG1752@2|Bacteria,1MX8Y@1224|Proteobacteria,2TVP9@28211|Alphaproteobacteria,3JS3R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Patatin-like phospholipase	-	-	-	ko:K07001	-	-	-	-	ko00000	-	-	-	Patatin
SX1_k127_4573685_0	1297865.APJD01000011_gene6537	4.845e-222	689.0	COG0069@1|root,COG0069@2|Bacteria,1MU7B@1224|Proteobacteria,2TREH@28211|Alphaproteobacteria,3JSMA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the glutamate synthase family	MA20_40290	-	-	-	-	-	-	-	-	-	-	-	Glu_synthase
SX1_k127_4576601_2	1297865.APJD01000039_gene1718	2.787e-272	841.0	COG0534@1|root,COG0534@2|Bacteria,1MVRV@1224|Proteobacteria,2TSMQ@28211|Alphaproteobacteria,3JQPE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	MatE	MA20_06615	-	-	-	-	-	-	-	-	-	-	-	MatE
SX1_k127_4576601_8	1297865.APJD01000039_gene1719	2.227e-120	386.0	COG4552@1|root,COG4552@2|Bacteria,1MVCP@1224|Proteobacteria,2TT6Z@28211|Alphaproteobacteria,3JR0T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_9
SX1_k127_4576601_7	1297865.APJD01000039_gene1720	7.181e-136	432.0	COG0605@1|root,COG0605@2|Bacteria,1MVW2@1224|Proteobacteria,2TU3T@28211|Alphaproteobacteria,3JRQP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Destroys radicals which are normally produced within the cells and which are toxic to biological systems	sodB	-	1.15.1.1	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	-	-	-	ko00000,ko00001,ko01000	-	-	-	Sod_Fe_C,Sod_Fe_N
SX1_k127_4576601_11	1297865.APJD01000039_gene1721	9.751e-77	261.0	COG0239@1|root,COG0239@2|Bacteria,1MZNH@1224|Proteobacteria,2UBUP@28211|Alphaproteobacteria,3JZQH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Important for reducing fluoride concentration in the cell, thus reducing its toxicity	crcB	-	-	ko:K06199	-	-	-	-	ko00000,ko02000	1.A.43.1,1.A.43.2,1.A.43.3	-	-	CRCB
SX1_k127_4576601_6	1297865.APJD01000039_gene1722	9.232e-145	462.0	COG0811@1|root,COG0811@2|Bacteria,1NCWW@1224|Proteobacteria,2TQXQ@28211|Alphaproteobacteria,3JUM9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	MotA/TolQ/ExbB proton channel family	tolQ	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0017038,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944	-	ko:K03562	ko01120,map01120	-	-	-	ko00000,ko02000	1.A.30.2.2	-	-	MotA_ExbB
SX1_k127_4576601_10	1297865.APJD01000039_gene1723	5.379e-92	305.0	COG0848@1|root,COG0848@2|Bacteria,1MZ6M@1224|Proteobacteria,2UA46@28211|Alphaproteobacteria,3JSEY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	PFAM Biopolymer transport protein ExbD TolR	tolR	-	-	ko:K03559,ko:K03560	-	-	-	-	ko00000,ko02000	1.A.30.2.1,1.A.30.2.2	-	-	ExbD
SX1_k127_4576601_4	1297865.APJD01000039_gene1724	3.287e-189	593.0	COG3170@1|root,COG3170@2|Bacteria,1QW53@1224|Proteobacteria,2TWS6@28211|Alphaproteobacteria,3JTDJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	TIGRFAM protein TolA	MA20_04000	-	-	ko:K03646	-	-	-	-	ko00000,ko02000	2.C.1.2	-	-	-
SX1_k127_4576601_1	1297865.APJD01000039_gene1725	4.203e-302	927.0	COG0823@1|root,COG0823@2|Bacteria,1MV09@1224|Proteobacteria,2TR03@28211|Alphaproteobacteria,3JTJA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Involved in the TonB-independent uptake of proteins	tolB	-	-	ko:K03641	-	-	-	-	ko00000,ko02000	2.C.1.2	-	-	PD40,TolB_N
SX1_k127_4576601_0	1297865.APJD01000039_gene1726	0.0	1515.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,3JRMT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Putative diguanylate phosphodiesterase	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,PAS_7
SX1_k127_4576601_5	1297865.APJD01000039_gene1727	3.458e-159	502.0	COG3916@1|root,COG3916@2|Bacteria,1R6MX@1224|Proteobacteria,2TR6Y@28211|Alphaproteobacteria,3JT6K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	QT	Acyl-homoserine-lactone synthase	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4576601_9	1297865.APJD01000039_gene1728	2.069e-97	321.0	COG2885@1|root,COG2885@2|Bacteria,1MZTV@1224|Proteobacteria,2U758@28211|Alphaproteobacteria,3JUHJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the ompA family	pal	-	-	ko:K03640	-	-	-	-	ko00000,ko02000	2.C.1.2	-	-	OmpA
SX1_k127_4576601_3	1297865.APJD01000039_gene1729	5.942e-198	621.0	COG1729@1|root,COG1729@2|Bacteria,1MUSV@1224|Proteobacteria,2U6ZQ@28211|Alphaproteobacteria,3JSGB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division	cpoB	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_6,TolA_bind_tri
SX1_k127_4576601_12	1297865.APJD01000039_gene1730	2.074e-59	207.0	COG0037@1|root,COG0037@2|Bacteria,1MU85@1224|Proteobacteria,2TRK1@28211|Alphaproteobacteria,3JS5P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine	tilS	-	6.3.4.19	ko:K04075	-	-	R09597	RC02633,RC02634	ko00000,ko01000,ko03016	-	-	-	ATP_bind_3
SX1_k127_4577824_13	1297865.APJD01000010_gene5028	6.517e-118	379.0	COG0034@1|root,COG0034@2|Bacteria,1MU0V@1224|Proteobacteria,2TR8V@28211|Alphaproteobacteria,3JUSU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine	purF	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464	2.4.2.14	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	M00048	R01072	RC00010,RC02724,RC02752	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	GATase_6,GATase_7,Pribosyltran
SX1_k127_4577824_7	1230476.C207_05493	4.325e-148	471.0	COG1028@1|root,COG1028@2|Bacteria,1MWBC@1224|Proteobacteria,2TTQS@28211|Alphaproteobacteria,3JT8N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Belongs to the short-chain dehydrogenases reductases (SDR) family	MA20_27940	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0008150,GO:0008152,GO:0009056,GO:0016491,GO:0044464,GO:0055114,GO:0071704,GO:1901575	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_4577824_5	1297865.APJD01000010_gene5026	2.563e-247	770.0	COG3391@1|root,COG3391@2|Bacteria,1MXRF@1224|Proteobacteria,2U1E9@28211|Alphaproteobacteria,3JTTY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	NHL
SX1_k127_4577824_3	1297865.APJD01000010_gene5025	4.798e-261	804.0	COG3391@1|root,COG3391@2|Bacteria,1MXRF@1224|Proteobacteria,2U1E9@28211|Alphaproteobacteria,3JTTY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	amine dehydrogenase activity	-	-	-	-	-	-	-	-	-	-	-	-	NHL
SX1_k127_4577824_2	1297865.APJD01000010_gene5024	1.093e-265	818.0	COG0683@1|root,COG0683@2|Bacteria,1MUCB@1224|Proteobacteria,2TRWV@28211|Alphaproteobacteria,3JS24@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein domain	MA20_27930	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_4577824_14	1297865.APJD01000010_gene5023	7.391e-118	380.0	COG4731@1|root,COG4731@2|Bacteria,1R70G@1224|Proteobacteria,2TV3F@28211|Alphaproteobacteria,3JSJT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized protein conserved in bacteria (DUF2147)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2147
SX1_k127_4577824_10	1297865.APJD01000010_gene5022	7.68e-133	427.0	28PW7@1|root,2ZCGM@2|Bacteria,1R7U8@1224|Proteobacteria,2TSV3@28211|Alphaproteobacteria,3JXAQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3313)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3313
SX1_k127_4577824_11	1297865.APJD01000010_gene5021	3.12e-131	421.0	COG1309@1|root,COG1309@2|Bacteria,1N6TK@1224|Proteobacteria,2TV16@28211|Alphaproteobacteria,3JWHW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_4577824_18	1297865.APJD01000010_gene5020	3.003e-59	205.0	2A0XP@1|root,30P2U@2|Bacteria,1NX4Q@1224|Proteobacteria,2UT3Y@28211|Alphaproteobacteria,3K4KR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4577824_17	1297865.APJD01000010_gene5019	6.848e-82	281.0	COG4319@1|root,COG4319@2|Bacteria,1N99A@1224|Proteobacteria,2U74I@28211|Alphaproteobacteria,3JZ2B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_3
SX1_k127_4577824_9	1297865.APJD01000010_gene5018	8.654e-134	428.0	COG0625@1|root,COG0625@2|Bacteria,1PA0Q@1224|Proteobacteria,2U1TW@28211|Alphaproteobacteria,3JWF3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, N-terminal domain	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C_2,GST_N,GST_N_3
SX1_k127_4577824_4	1297865.APJD01000010_gene5017	1.084e-258	807.0	COG0477@1|root,COG2814@2|Bacteria,1MVSH@1224|Proteobacteria,2TUEW@28211|Alphaproteobacteria,3JTAS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	MA20_27925	-	-	ko:K08151	-	M00668	-	-	ko00000,ko00002,ko01504,ko02000	2.A.1.2.38,2.A.1.2.39,2.A.1.2.4,2.A.1.2.41,2.A.1.2.68,2.A.1.2.75	-	-	MFS_1,Sugar_tr
SX1_k127_4577824_1	1297865.APJD01000010_gene5016	3.84e-297	912.0	COG1160@1|root,COG1160@2|Bacteria,1MU9S@1224|Proteobacteria,2TT38@28211|Alphaproteobacteria,3JT1G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	GTPase that plays an essential role in the late steps of ribosome biogenesis	der	-	-	ko:K03977	-	-	-	-	ko00000,ko03009	-	-	-	KH_dom-like,MMR_HSR1
SX1_k127_4577824_16	1297865.APJD01000010_gene5015	2.35e-104	345.0	2CH5S@1|root,2ZUHH@2|Bacteria,1RKQR@1224|Proteobacteria,2TSDT@28211|Alphaproteobacteria,3JTRA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4577824_12	398525.KB900701_gene4487	2.405e-123	396.0	COG4649@1|root,COG4649@2|Bacteria,1P2GI@1224|Proteobacteria,2UCFZ@28211|Alphaproteobacteria,3JS1T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tetratricopeptide repeat-like domain	-	-	-	-	-	-	-	-	-	-	-	-	TPR_21
SX1_k127_4577824_0	1297865.APJD01000010_gene5013	0.0	1068.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JUFM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	MA20_27905	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_4577824_6	1297865.APJD01000010_gene5012	8.831e-172	542.0	COG0413@1|root,COG0413@2|Bacteria,1MU3B@1224|Proteobacteria,2TQT1@28211|Alphaproteobacteria,3JTTZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate	panB	-	2.1.2.11	ko:K00606	ko00770,ko01100,ko01110,map00770,map01100,map01110	M00119	R01226	RC00022,RC00200	ko00000,ko00001,ko00002,ko01000	-	-	-	Pantoate_transf
SX1_k127_4577824_15	1297865.APJD01000010_gene5011	3.041e-117	379.0	COG4094@1|root,COG4094@2|Bacteria,1RDHB@1224|Proteobacteria,2TQWY@28211|Alphaproteobacteria,3JTFH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	NnrU protein	nnrU	-	-	-	-	-	-	-	-	-	-	-	NnrU
SX1_k127_4577824_8	1297865.APJD01000010_gene5010	6.744e-137	437.0	2E5B6@1|root,3303A@2|Bacteria,1RDY2@1224|Proteobacteria,2TVMZ@28211|Alphaproteobacteria,3JU5S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4590213_3	1230476.C207_04949	6.323e-17	81.0	COG4773@1|root,COG4773@2|Bacteria,1QTT0@1224|Proteobacteria,2TQSQ@28211|Alphaproteobacteria,3JQP4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SX1_k127_4590213_0	1297865.APJD01000020_gene56	3.214e-282	868.0	COG0112@1|root,COG0112@2|Bacteria,1MUIS@1224|Proteobacteria,2TQKT@28211|Alphaproteobacteria,3JTRF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism	glyA	-	2.1.2.1	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	M00140,M00141,M00346,M00532	R00945,R09099	RC00022,RC00112,RC01583,RC02958	ko00000,ko00001,ko00002,ko01000	-	-	-	SHMT
SX1_k127_4590213_1	398525.KB900701_gene5354	1.167e-93	308.0	COG1327@1|root,COG1327@2|Bacteria,1RE7V@1224|Proteobacteria,2U75W@28211|Alphaproteobacteria,3JVH1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes	nrdR	-	-	ko:K07738	-	-	-	-	ko00000,ko03000	-	-	-	ATP-cone
SX1_k127_4590213_2	1230476.C207_04952	7.534e-80	267.0	COG0117@1|root,COG1985@1|root,COG0117@2|Bacteria,COG1985@2|Bacteria,1MUWT@1224|Proteobacteria,2TR70@28211|Alphaproteobacteria,3JR4M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate	ribD	-	1.1.1.193,3.5.4.26	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	M00125	R03458,R03459	RC00204,RC00933	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C,dCMP_cyt_deam_1
SX1_k127_4614182_0	1297865.APJD01000006_gene4420	0.0	1045.0	COG5267@1|root,COG5267@2|Bacteria,1MWJK@1224|Proteobacteria,2TSY7@28211|Alphaproteobacteria,3JXQ2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1800)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1800
SX1_k127_4614182_1	1297865.APJD01000006_gene4421	3.358e-90	304.0	COG4102@1|root,COG4102@2|Bacteria,1MX4R@1224|Proteobacteria,2TSFB@28211|Alphaproteobacteria,3JV6P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1501)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1501
SX1_k127_4616765_3	1297865.APJD01000007_gene2268	1.752e-180	567.0	COG1116@1|root,COG1116@2|Bacteria,1P4HB@1224|Proteobacteria,2TUY9@28211|Alphaproteobacteria,3JR2W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ATPases associated with a variety of cellular activities	MA20_26685	-	-	ko:K02049	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	ABC_tran
SX1_k127_4616765_4	1297865.APJD01000007_gene2269	3.495e-159	505.0	COG0600@1|root,COG0600@2|Bacteria,1MVAE@1224|Proteobacteria,2TSAS@28211|Alphaproteobacteria,3JVMN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Binding-protein-dependent transport system inner membrane component	MA20_26690	-	-	ko:K02050	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	BPD_transp_1
SX1_k127_4616765_2	398525.KB900701_gene3424	5.604e-207	661.0	COG0715@1|root,COG0715@2|Bacteria,1MW53@1224|Proteobacteria,2TSHF@28211|Alphaproteobacteria,3JQZC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NMT1/THI5 like	MA20_26695	-	-	ko:K02051	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	NMT1
SX1_k127_4616765_0	1297865.APJD01000007_gene2271	1.681e-318	975.0	COG0402@1|root,COG0402@2|Bacteria,1MVPA@1224|Proteobacteria,2TSZ0@28211|Alphaproteobacteria,3JU0S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
SX1_k127_4616765_1	1297865.APJD01000007_gene2272	2.758e-228	708.0	COG1804@1|root,COG1804@2|Bacteria,1NSWZ@1224|Proteobacteria,2U2UE@28211|Alphaproteobacteria,3JWDN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA-transferase family III	-	-	-	-	-	-	-	-	-	-	-	-	CoA_transf_3
SX1_k127_4619730_5	1297865.APJD01000010_gene5062	1.793e-223	694.0	COG0795@1|root,COG0795@2|Bacteria,1MVW3@1224|Proteobacteria,2TR76@28211|Alphaproteobacteria,3JRHK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Permease	lptG	-	-	ko:K11720	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko02000	1.B.42.1	-	-	YjgP_YjgQ
SX1_k127_4619730_4	1297865.APJD01000010_gene5063	1.632e-245	761.0	COG0795@1|root,COG0795@2|Bacteria,1MUF2@1224|Proteobacteria,2TQUB@28211|Alphaproteobacteria,3JSK7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Permease	MA20_28210	-	-	ko:K07091	ko02010,map02010	M00320	-	-	ko00000,ko00001,ko00002,ko02000	1.B.42.1	-	-	YjgP_YjgQ
SX1_k127_4619730_1	1297865.APJD01000010_gene5064	6.392e-320	980.0	COG0260@1|root,COG0260@2|Bacteria,1MUF9@1224|Proteobacteria,2TQU9@28211|Alphaproteobacteria,3JUA7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides	pepA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	3.4.11.1	ko:K01255	ko00480,ko01100,map00480,map01100	-	R00899,R04951	RC00096,RC00141	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_M17,Peptidase_M17_N
SX1_k127_4619730_10	1297865.APJD01000010_gene5065	1.358e-95	313.0	COG2927@1|root,COG2927@2|Bacteria,1RGVC@1224|Proteobacteria,2U94V@28211|Alphaproteobacteria,3JY2F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DNA polymerase III, chi subunit	holC	-	2.7.7.7	ko:K02339	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_chi
SX1_k127_4619730_9	1297865.APJD01000010_gene5066	1.331e-104	341.0	293K0@1|root,2ZR1Z@2|Bacteria,1QXT6@1224|Proteobacteria,2U07A@28211|Alphaproteobacteria,3JZ3X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4619730_6	1297865.APJD01000010_gene5067	8.523e-175	550.0	COG0583@1|root,COG0583@2|Bacteria,1QYAP@1224|Proteobacteria,2U7F2@28211|Alphaproteobacteria,3K52F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	ko:K21699	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
SX1_k127_4619730_8	1297865.APJD01000010_gene5068	5.44e-134	428.0	COG3665@1|root,COG3665@2|Bacteria,1N9DM@1224|Proteobacteria,2UIXE@28211|Alphaproteobacteria,3K13Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF1989)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1989
SX1_k127_4619730_0	1297865.APJD01000010_gene5069	0.0	1204.0	COG0488@1|root,COG0488@2|Bacteria,1MU37@1224|Proteobacteria,2TQRZ@28211|Alphaproteobacteria,3JS3I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	ABC transporter	yheS	GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363	-	ko:K06158	-	-	-	-	ko00000,ko03012	-	-	-	ABC_tran,ABC_tran_CTD,ABC_tran_Xtn
SX1_k127_4619730_12	1297865.APJD01000010_gene5070	1.871e-76	256.0	2A1D8@1|root,30PK9@2|Bacteria,1N02R@1224|Proteobacteria,2UDVM@28211|Alphaproteobacteria,3K03J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4619730_11	1297865.APJD01000010_gene5071	8.203e-84	280.0	COG0105@1|root,COG0105@2|Bacteria,1R9ZA@1224|Proteobacteria,2U5CS@28211|Alphaproteobacteria,3JY2D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate	ndk	GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564	2.7.4.6	ko:K00940	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016	M00049,M00050,M00052,M00053	R00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895	RC00002	ko00000,ko00001,ko00002,ko01000,ko04131	-	-	-	NDK
SX1_k127_4619730_7	1297865.APJD01000010_gene5072	4.293e-167	528.0	COG0861@1|root,COG0861@2|Bacteria,1QZU6@1224|Proteobacteria,2TURK@28211|Alphaproteobacteria,3JQTZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Integral membrane protein TerC family	MA20_28265	-	-	-	-	-	-	-	-	-	-	-	TerC
SX1_k127_4619730_2	1230476.C207_05537	4.436e-314	963.0	COG0248@1|root,COG0248@2|Bacteria,1MV35@1224|Proteobacteria,2TR1W@28211|Alphaproteobacteria,3JSEE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	FP	Ppx/GppA phosphatase family	ppx	-	3.6.1.11,3.6.1.40	ko:K01524	ko00230,map00230	-	R03409	RC00002	ko00000,ko00001,ko01000	-	-	-	Ppx-GppA
SX1_k127_4619730_3	1297865.APJD01000010_gene5074	4.594e-271	834.0	COG0855@1|root,COG0855@2|Bacteria,1MUM3@1224|Proteobacteria,2TRBP@28211|Alphaproteobacteria,3JTTT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)	ppk	-	2.7.4.1	ko:K00937	ko00190,ko03018,map00190,map03018	-	-	-	ko00000,ko00001,ko01000,ko03019	-	-	-	PP_kinase,PP_kinase_C,PP_kinase_N
SX1_k127_4624303_1	1297865.APJD01000007_gene1926	1.52e-103	336.0	COG5426@1|root,COG5426@2|Bacteria,1MVWA@1224|Proteobacteria,2TQNQ@28211|Alphaproteobacteria,3JRQR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	membrane	MA20_44660	-	-	-	-	-	-	-	-	-	-	-	GATase1_like
SX1_k127_4624303_0	1297865.APJD01000007_gene1926	7.162e-224	695.0	COG5426@1|root,COG5426@2|Bacteria,1MVWA@1224|Proteobacteria,2TQNQ@28211|Alphaproteobacteria,3JRQR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	membrane	MA20_44660	-	-	-	-	-	-	-	-	-	-	-	GATase1_like
SX1_k127_4627989_1	1297865.APJD01000028_gene5154	1.436e-131	420.0	COG3182@1|root,COG3182@2|Bacteria,1MXGY@1224|Proteobacteria,2TV6J@28211|Alphaproteobacteria,3JSQA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PepSY-associated TM region	MA20_29520	-	-	-	-	-	-	-	-	-	-	-	PepSY_TM
SX1_k127_4627989_0	1297865.APJD01000028_gene5153	0.0	1461.0	COG4773@1|root,COG4773@2|Bacteria,1QTT0@1224|Proteobacteria,2TQSQ@28211|Alphaproteobacteria,3JQP4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TonB dependent receptor	MA20_29525	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,STN,TonB_dep_Rec
SX1_k127_4630793_2	1297865.APJD01000003_gene6457	2.923e-107	347.0	COG4666@1|root,COG4666@2|Bacteria,1MUNB@1224|Proteobacteria,2TQY9@28211|Alphaproteobacteria,3JT9R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite ATP-independent periplasmic transporter, DctM component	MA20_20970	-	-	-	-	-	-	-	-	-	-	-	DctM
SX1_k127_4630793_0	1230476.C207_02583	1.542e-187	587.0	COG2358@1|root,COG2358@2|Bacteria,1MXW1@1224|Proteobacteria,2TSK2@28211|Alphaproteobacteria,3JSVJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	NMT1-like family	MA20_20975	-	-	ko:K07080	-	-	-	-	ko00000	-	-	-	NMT1_3
SX1_k127_4630793_1	398525.KB900701_gene2391	3.206e-123	395.0	COG0745@1|root,COG2200@1|root,COG0745@2|Bacteria,COG2200@2|Bacteria,1MVK8@1224|Proteobacteria,2TRIW@28211|Alphaproteobacteria,3JSTD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Putative diguanylate phosphodiesterase	-	-	-	-	-	-	-	-	-	-	-	-	EAL
SX1_k127_4635716_4	1297865.APJD01000020_gene313	4.845e-56	195.0	COG2230@1|root,COG2230@2|Bacteria,1MX3U@1224|Proteobacteria,2TR8K@28211|Alphaproteobacteria,3JRR9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	cyclopropane-fatty-acyl-phospholipid synthase	cfaS	-	2.1.1.79	ko:K00574	-	-	-	-	ko00000,ko01000	-	-	-	CMAS
SX1_k127_4635716_1	1297865.APJD01000020_gene312	1.741e-226	706.0	COG0031@1|root,COG0031@2|Bacteria,1MUBE@1224|Proteobacteria,2TR4W@28211|Alphaproteobacteria,3JRM9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Pyridoxal-phosphate dependent enzyme	cysB	GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.5.1.47	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	M00021	R00897,R03601,R04859	RC00020,RC02814,RC02821	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
SX1_k127_4635716_3	1297865.APJD01000020_gene311	4.497e-153	502.0	COG1126@1|root,COG1126@2|Bacteria,1MU9Q@1224|Proteobacteria,2TQX2@28211|Alphaproteobacteria,3JUA8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ABC transporter	glnQ	-	3.6.3.21	ko:K02028,ko:K09972	ko02010,map02010	M00232,M00236	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.3,3.A.1.3.17,3.A.1.3.18,3.A.1.3.7,3.A.1.3.8	-	-	ABC_tran
SX1_k127_4635716_0	1297865.APJD01000020_gene310	6.61e-315	981.0	COG0765@1|root,COG0765@2|Bacteria,1MV3I@1224|Proteobacteria,2TR9C@28211|Alphaproteobacteria,3JRDN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	amino acid ABC	-	-	-	ko:K09971	ko02010,map02010	M00232	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3.18,3.A.1.3.7,3.A.1.3.8	-	-	BPD_transp_1
SX1_k127_4635716_2	1297865.APJD01000020_gene309	8.864e-174	546.0	COG4597@1|root,COG4597@2|Bacteria,1MV0S@1224|Proteobacteria,2TR7G@28211|Alphaproteobacteria,3JV9Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	amino acid ABC transporter	MA20_30065	-	-	ko:K09970	ko02010,map02010	M00232	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3.18,3.A.1.3.7,3.A.1.3.8	-	-	BPD_transp_1
SX1_k127_4636161_15	1297865.APJD01000020_gene208	6.525e-114	368.0	COG0743@1|root,COG0743@2|Bacteria,1MU4G@1224|Proteobacteria,2TSD1@28211|Alphaproteobacteria,3JRCU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)	dxr	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576	1.1.1.267	ko:K00099	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R05688	RC01452	ko00000,ko00001,ko00002,ko01000	-	-	-	DXPR_C,DXP_redisom_C,DXP_reductoisom
SX1_k127_4636161_7	1297865.APJD01000020_gene209	3.605e-233	724.0	COG0750@1|root,COG0750@2|Bacteria,1MU91@1224|Proteobacteria,2TQXJ@28211|Alphaproteobacteria,3JSGZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	zinc metalloprotease	rseP	-	-	ko:K11749	ko02024,ko04112,map02024,map04112	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	PDZ_2,Peptidase_M50
SX1_k127_4636161_0	1297865.APJD01000020_gene210	0.0	1677.0	COG4775@1|root,COG4775@2|Bacteria,1MU0D@1224|Proteobacteria,2TR7W@28211|Alphaproteobacteria,3JT8X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	bamA	-	-	ko:K07277	-	-	-	-	ko00000,ko02000,ko03029	1.B.33	-	-	Bac_surface_Ag,POTRA
SX1_k127_4636161_8	1297865.APJD01000020_gene211	3.056e-228	708.0	COG1044@1|root,COG1044@2|Bacteria,1MUX6@1224|Proteobacteria,2TS8U@28211|Alphaproteobacteria,3JR6V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	lpxD	-	2.3.1.191	ko:K02536	ko00540,ko01100,map00540,map01100	M00060	R04550	RC00039,RC00166	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Hexapep,Hexapep_2,LpxD
SX1_k127_4636161_16	1297865.APJD01000020_gene212	6.635e-99	322.0	COG0764@1|root,COG0764@2|Bacteria,1RH2T@1224|Proteobacteria,2U7G4@28211|Alphaproteobacteria,3JUYW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs	fabZ	-	4.2.1.59	ko:K02372	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04428,R04535,R04537,R04544,R04568,R04954,R04965,R07764,R10117,R10121	RC00831,RC01095	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	FabA
SX1_k127_4636161_20	1297865.APJD01000020_gene213	2.283e-63	218.0	2E9Q0@1|root,333WC@2|Bacteria,1RIQJ@1224|Proteobacteria,2U9SR@28211|Alphaproteobacteria,3JZKY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	KTSC domain	-	-	-	-	-	-	-	-	-	-	-	-	KTSC
SX1_k127_4636161_11	1297865.APJD01000020_gene214	1.376e-170	544.0	COG1043@1|root,COG1043@2|Bacteria,1MUHQ@1224|Proteobacteria,2TRK9@28211|Alphaproteobacteria,3JRXY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	lpxA	-	2.3.1.129	ko:K00677	ko00540,ko01100,ko01503,map00540,map01100,map01503	M00060	R04567	RC00039,RC00055	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Acetyltransf_11,Hexapep
SX1_k127_4636161_10	1297865.APJD01000020_gene215	1.138e-174	554.0	COG3494@1|root,COG3494@2|Bacteria,1MWTH@1224|Proteobacteria,2U4AB@28211|Alphaproteobacteria,3JRR0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1009)	cdsA2	GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509	-	ko:K09949	-	-	-	-	ko00000	-	-	-	DUF1009
SX1_k127_4636161_6	1297865.APJD01000020_gene216	9.361e-246	765.0	COG0763@1|root,COG0763@2|Bacteria,1MVBI@1224|Proteobacteria,2TSEA@28211|Alphaproteobacteria,3JUMR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	lpxB	GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509	2.4.1.182	ko:K00748	ko00540,ko01100,map00540,map01100	M00060	R04606	RC00005,RC00059	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT19	-	LpxB
SX1_k127_4636161_13	1297865.APJD01000020_gene217	8.57e-145	459.0	COG3832@1|root,COG3832@2|Bacteria,1R68R@1224|Proteobacteria,2TTYQ@28211|Alphaproteobacteria,3JT78@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
SX1_k127_4636161_19	1297865.APJD01000020_gene218	2.028e-63	218.0	COG0640@1|root,COG0640@2|Bacteria,1N7VH@1224|Proteobacteria,2U72C@28211|Alphaproteobacteria,3JYR9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, Arsenical Resistance Operon Repressor	MA20_27670	-	-	-	-	-	-	-	-	-	-	-	HTH_20,HTH_5
SX1_k127_4636161_4	1297865.APJD01000020_gene219	3.846e-300	920.0	COG0372@1|root,COG0372@2|Bacteria,1MUKX@1224|Proteobacteria,2TS63@28211|Alphaproteobacteria,3JRZW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Belongs to the citrate synthase family	gltA	-	2.3.3.1	ko:K01647	ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230	M00009,M00010,M00012,M00740	R00351	RC00004,RC00067	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Citrate_synt
SX1_k127_4636161_3	1230476.C207_00900	1.751e-315	971.0	COG0008@1|root,COG0008@2|Bacteria,1MUCR@1224|Proteobacteria,2TRSU@28211|Alphaproteobacteria,3JS6J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)	gltX	-	6.1.1.17	ko:K01885	ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120	M00121,M00359,M00360	R05578	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016	-	-	-	tRNA-synt_1c
SX1_k127_4636161_2	1297865.APJD01000020_gene221	0.0	1166.0	COG0008@1|root,COG0008@2|Bacteria,1MUC8@1224|Proteobacteria,2TRKX@28211|Alphaproteobacteria,3JUGQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	glutaminyl-tRNA synthetase	glnS	-	6.1.1.18	ko:K01886	ko00970,ko01100,map00970,map01100	M00359,M00360	R03652	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	tRNA-synt_1c,tRNA-synt_1c_C
SX1_k127_4636161_18	1297865.APJD01000020_gene222	1.862e-81	271.0	COG4319@1|root,COG4319@2|Bacteria,1RE87@1224|Proteobacteria,2U7SI@28211|Alphaproteobacteria,3JZ4N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF4440,SnoaL_3
SX1_k127_4636161_1	1297865.APJD01000020_gene223	0.0	1449.0	COG0658@1|root,COG0658@2|Bacteria,1MUKF@1224|Proteobacteria,2TRD5@28211|Alphaproteobacteria,3JRIG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Competence protein	-	-	-	ko:K02238	-	M00429	-	-	ko00000,ko00002,ko02044	3.A.11.1,3.A.11.2	-	-	Competence,DUF4131
SX1_k127_4636161_21	1297865.APJD01000020_gene224	2.702e-45	166.0	29EGQ@1|root,301EM@2|Bacteria,1N7HJ@1224|Proteobacteria,2UG8X@28211|Alphaproteobacteria,3K1HR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4636161_17	1297865.APJD01000020_gene225	8.598e-89	295.0	2F7IU@1|root,33ZZE@2|Bacteria,1RBQ7@1224|Proteobacteria,2UC36@28211|Alphaproteobacteria,3JZ42@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_37725	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4636161_12	1297865.APJD01000020_gene226	2.605e-145	464.0	COG1974@1|root,COG1974@2|Bacteria,1MW80@1224|Proteobacteria,2TT7W@28211|Alphaproteobacteria,3JS89@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	lexA	GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031668,GO:0032991,GO:0032993,GO:0033554,GO:0043565,GO:0044212,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141	3.4.21.88	ko:K01356	-	M00729	-	-	ko00000,ko00002,ko01000,ko01002,ko03400	-	-	-	LexA_DNA_bind,Peptidase_S24
SX1_k127_4636161_5	1297865.APJD01000020_gene227	2.832e-249	771.0	COG0303@1|root,COG0303@2|Bacteria,1MVD5@1224|Proteobacteria,2TQRI@28211|Alphaproteobacteria,3JRTS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	MoeA C-terminal region (domain IV)	moeA	GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006464,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0018315,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0032324,GO:0034641,GO:0036211,GO:0042040,GO:0042278,GO:0042802,GO:0043170,GO:0043412,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061598,GO:0061599,GO:0070566,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657	2.10.1.1	ko:K03750	ko00790,ko01100,map00790,map01100	-	R09735	RC03462	ko00000,ko00001,ko01000	-	-	-	MoCF_biosynth,MoeA_C,MoeA_N
SX1_k127_4636161_14	1297865.APJD01000020_gene228	9.987e-126	407.0	COG1011@1|root,COG1011@2|Bacteria,1PGNF@1224|Proteobacteria,2TWR1@28211|Alphaproteobacteria,3JRHW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Haloacid dehalogenase-like hydrolase	MA20_37750	-	3.1.3.10	ko:K20866	ko00010,ko01120,map00010,map01120	-	R00947	RC00078	ko00000,ko00001,ko01000	-	-	-	HAD_2
SX1_k127_4636161_9	1297865.APJD01000020_gene229	4.728e-190	594.0	COG0834@1|root,COG0834@2|Bacteria,1R723@1224|Proteobacteria,2TU3B@28211|Alphaproteobacteria,3JUPE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	ET	Bacterial periplasmic substrate-binding proteins	MA20_26730	-	-	ko:K10001	ko02010,ko02020,map02010,map02020	M00230	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3.19,3.A.1.3.4	-	-	SBP_bac_3
SX1_k127_4636161_22	639283.Snov_0407	4.839e-15	80.0	COG1018@1|root,COG1018@2|Bacteria,1R1A8@1224|Proteobacteria,2TYZI@28211|Alphaproteobacteria,3EZV3@335928|Xanthobacteraceae	2|Bacteria	C	Oxidoreductase FAD-binding domain	-	-	1.14.12.17	ko:K05916	ko05132,map05132	-	-	-	ko00000,ko00001,ko01000	-	-	-	FAD_binding_6,Globin,NAD_binding_1,PAS,Protoglobin
SX1_k127_4638675_2	1297865.APJD01000005_gene3639	1.357e-287	896.0	COG2721@1|root,COG2721@2|Bacteria,1MU9V@1224|Proteobacteria,2TTDT@28211|Alphaproteobacteria,3JT6J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	D-galactarate dehydratase / Altronate hydrolase, C terminus	MA20_16205	-	4.2.1.7	ko:K01685	ko00040,ko01100,map00040,map01100	M00631	R01540	RC00543	ko00000,ko00001,ko00002,ko01000	-	-	-	GD_AH_C,SAF
SX1_k127_4638675_8	1297865.APJD01000005_gene3638	1.954e-170	535.0	COG3836@1|root,COG3836@2|Bacteria,1MUSG@1224|Proteobacteria,2TT2W@28211|Alphaproteobacteria,3JVT1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Belongs to the HpcH HpaI aldolase family	MA20_16210	-	4.1.2.52	ko:K02510	ko00350,ko01120,map00350,map01120	-	R01645,R01647	RC00307,RC00572,RC00574,RC03057	ko00000,ko00001,ko01000	-	-	-	HpcH_HpaI
SX1_k127_4638675_4	1297865.APJD01000005_gene3637	1.597e-235	728.0	COG2055@1|root,COG2055@2|Bacteria,1MWQY@1224|Proteobacteria,2TR37@28211|Alphaproteobacteria,3JT0K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Belongs to the LDH2 MDH2 oxidoreductase family	-	-	1.1.1.350	ko:K00073,ko:K13574	ko00230,ko01120,map00230,map01120	-	R02935,R02936	RC00169	ko00000,ko00001,ko01000	-	-	-	Ldh_2
SX1_k127_4638675_9	1297865.APJD01000005_gene3636	1.478e-146	468.0	COG0410@1|root,COG0410@2|Bacteria,1Q0CV@1224|Proteobacteria,2TTSP@28211|Alphaproteobacteria,3JVJ8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ABC transporter	-	-	-	ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran
SX1_k127_4638675_0	1297865.APJD01000005_gene3635	0.0	1153.0	COG0411@1|root,COG4177@1|root,COG0411@2|Bacteria,COG4177@2|Bacteria,1MUTY@1224|Proteobacteria,2TQVU@28211|Alphaproteobacteria,3JSQW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Branched-chain amino acid transport system / permease component	-	-	-	ko:K01995,ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C,BPD_transp_2
SX1_k127_4638675_6	1297865.APJD01000005_gene3634	2.411e-172	542.0	COG0559@1|root,COG0559@2|Bacteria,1MU25@1224|Proteobacteria,2TSDS@28211|Alphaproteobacteria,3JWTE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	-	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_4638675_12	1297865.APJD01000005_gene3687	7.109e-11	64.0	COG0587@1|root,COG0587@2|Bacteria,1MUE4@1224|Proteobacteria,2TRUB@28211|Alphaproteobacteria,3JUU5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase	dnaE2	GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496	2.7.7.7	ko:K02337,ko:K14162	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_alpha,HHH_6,PHP,tRNA_anti-codon
SX1_k127_4638675_3	1230476.C207_05580	3.886e-242	749.0	COG0683@1|root,COG0683@2|Bacteria,1N3V5@1224|Proteobacteria,2U1KS@28211|Alphaproteobacteria,3JVMY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_4638675_5	1297865.APJD01000005_gene3632	1.631e-211	660.0	COG1802@1|root,COG1802@2|Bacteria,1R6P1@1224|Proteobacteria,2U6V2@28211|Alphaproteobacteria,3JVTY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FCD	-	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SX1_k127_4638675_10	1297865.APJD01000005_gene3631	2.854e-97	319.0	COG1846@1|root,COG1846@2|Bacteria,1RCY7@1224|Proteobacteria,2UAR3@28211|Alphaproteobacteria,3JV5I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SX1_k127_4638675_7	1297865.APJD01000005_gene3630	1.632e-170	536.0	COG3971@1|root,COG3971@2|Bacteria,1MVVV@1224|Proteobacteria,2TUWC@28211|Alphaproteobacteria,3JTMU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	hydratase'	hpaH	-	-	ko:K02509	ko00350,ko01120,map00350,map01120	-	R04132,R06897	RC01615,RC02595	ko00000,ko00001,ko01000	-	-	-	FAA_hydrolase
SX1_k127_4638675_11	716928.AJQT01000095_gene4808	5.479e-33	132.0	COG3232@1|root,COG3232@2|Bacteria,1RB8A@1224|Proteobacteria,2U5N5@28211|Alphaproteobacteria,4BFYQ@82115|Rhizobiaceae	28211|Alphaproteobacteria	E	5-carboxymethyl-2-hydroxymuconate isomerase	hpcD	-	5.3.3.10	ko:K01826	ko00350,ko01120,ko01220,map00350,map01120,map01220	M00533	R04379,R04482	RC01141,RC01162	ko00000,ko00001,ko00002,ko01000	-	-	-	CHMI
SX1_k127_4638675_1	1230476.C207_05575	0.0	1024.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,3JVTN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	belongs to the aldehyde dehydrogenase family	hpaE	-	1.2.1.60,1.2.1.8	ko:K00130,ko:K00151	ko00260,ko00350,ko01100,ko01120,ko01220,map00260,map00350,map01100,map01120,map01220	M00533,M00555	R02565,R02566,R04418	RC00080,RC00254	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
SX1_k127_4648932_2	1230476.C207_05677	6.689e-61	215.0	COG3103@1|root,COG4991@2|Bacteria,1REMW@1224|Proteobacteria,2U824@28211|Alphaproteobacteria,3JZ0I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Protein of unknown function (DUF1236)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1236,Gly-zipper_Omp
SX1_k127_4648932_3	1297865.APJD01000006_gene4469	1.134e-21	95.0	2AEV9@1|root,314SS@2|Bacteria,1NAGH@1224|Proteobacteria,2UJB1@28211|Alphaproteobacteria,3K0X6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3096)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3096
SX1_k127_4648932_0	1297865.APJD01000006_gene4470	0.0	1895.0	COG0574@1|root,COG1080@1|root,COG0574@2|Bacteria,COG1080@2|Bacteria,1MU0R@1224|Proteobacteria,2TR3C@28211|Alphaproteobacteria,3JSHW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	pyruvate phosphate dikinase	ppdK	-	2.7.9.1	ko:K01006	ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200	M00169,M00171,M00172,M00173	R00206	RC00002,RC00015	ko00000,ko00001,ko00002,ko01000	-	-	-	PEP-utilizers,PEP-utilizers_C,PPDK_N
SX1_k127_4648932_1	1297865.APJD01000006_gene4471	2.13e-303	932.0	COG3773@1|root,COG3773@2|Bacteria,1MWX3@1224|Proteobacteria,2TT15@28211|Alphaproteobacteria,3JT5Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Cell Wall Hydrolase	sleB	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_2
SX1_k127_4656469_6	1297865.APJD01000018_gene5668	1.351e-24	104.0	2DEYY@1|root,2ZPU6@2|Bacteria,1N9SD@1224|Proteobacteria,2UHFQ@28211|Alphaproteobacteria,3K0WQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3309)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3309
SX1_k127_4656469_4	1297865.APJD01000018_gene5667	6.051e-53	190.0	2EF9R@1|root,3392M@2|Bacteria,1RHNG@1224|Proteobacteria,2U9B1@28211|Alphaproteobacteria,3JZD6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	QU41_28935	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4656469_2	1297865.APJD01000018_gene5666	2.574e-113	366.0	2DMJE@1|root,32RYR@2|Bacteria,1N7PS@1224|Proteobacteria,2UFEW@28211|Alphaproteobacteria,3JT0Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF4112)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4112
SX1_k127_4656469_0	1297865.APJD01000018_gene5665	1.459e-193	612.0	COG2207@1|root,COG2207@2|Bacteria,1R5Q9@1224|Proteobacteria,2U1BX@28211|Alphaproteobacteria,3JWUC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding_2,HTH_18
SX1_k127_4656469_7	224911.27348412	6.609e-08	57.0	2978Y@1|root,2ZUGP@2|Bacteria,1RD02@1224|Proteobacteria,2U7VP@28211|Alphaproteobacteria,3JZ2X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4656469_5	1297865.APJD01000018_gene5664	6.624e-43	159.0	2DI5B@1|root,3022U@2|Bacteria,1N5G6@1224|Proteobacteria,2UE3J@28211|Alphaproteobacteria,3K0G2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4656469_3	398525.KB900701_gene7706	4.219e-77	259.0	COG0664@1|root,COG0664@2|Bacteria,1N6WV@1224|Proteobacteria,2U63Z@28211|Alphaproteobacteria,3JYEK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Cyclic nucleotide-monophosphate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	cNMP_binding
SX1_k127_4656469_1	1297865.APJD01000018_gene5662	2.905e-191	597.0	COG0306@1|root,COG0306@2|Bacteria,1MVXK@1224|Proteobacteria,2TU98@28211|Alphaproteobacteria,3JSN4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Phosphate transporter family	-	-	-	ko:K03306	-	-	-	-	ko00000	2.A.20	-	-	PHO4
SX1_k127_4663584_4	1297865.APJD01000023_gene1157	3.775e-148	469.0	COG0300@1|root,COG0300@2|Bacteria,1R409@1224|Proteobacteria,2TRST@28211|Alphaproteobacteria,3JU99@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_4663584_1	1297865.APJD01000023_gene1158	4.859e-172	541.0	2BR25@1|root,32JZX@2|Bacteria,1NBAX@1224|Proteobacteria,2TTE5@28211|Alphaproteobacteria,3JWI7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	GST_C
SX1_k127_4663584_0	1297865.APJD01000023_gene1159	6.365e-252	779.0	COG1454@1|root,COG1454@2|Bacteria,1MVPH@1224|Proteobacteria,2TSX8@28211|Alphaproteobacteria,3JUVR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Iron-containing alcohol dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	Fe-ADH
SX1_k127_4663584_3	1297865.APJD01000023_gene1160	3.083e-154	490.0	COG1024@1|root,COG1024@2|Bacteria,1Q67Q@1224|Proteobacteria,2U2T5@28211|Alphaproteobacteria,3JRNJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	MA20_21535	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_4663584_2	1297865.APJD01000023_gene1161	1.36e-155	492.0	COG2070@1|root,COG2070@2|Bacteria,1MWPC@1224|Proteobacteria,2TQRT@28211|Alphaproteobacteria,3JQS9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Nitronate monooxygenase	-	-	1.13.12.16	ko:K00459	ko00910,map00910	-	R00025	RC02541,RC02759	ko00000,ko00001,ko01000	-	-	-	NMO
SX1_k127_4664921_3	1297865.APJD01000036_gene1445	2.047e-191	598.0	COG1250@1|root,COG1250@2|Bacteria,1MU9P@1224|Proteobacteria,2TR8E@28211|Alphaproteobacteria,3JUAA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain	hbdA	-	1.1.1.157	ko:K00074	ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120	-	R01976,R05576,R06941	RC00029,RC00117	ko00000,ko00001,ko01000	-	-	-	3HCDH,3HCDH_N
SX1_k127_4664921_1	1297865.APJD01000036_gene1446	2.022e-258	797.0	COG0436@1|root,COG0436@2|Bacteria,1MW0Z@1224|Proteobacteria,2U3JV@28211|Alphaproteobacteria,3JX9A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	DegT/DnrJ/EryC1/StrS aminotransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Aminotran_1_2
SX1_k127_4664921_7	1297865.APJD01000036_gene1447	4.811e-75	253.0	COG1942@1|root,COG1942@2|Bacteria,1RHA5@1224|Proteobacteria,2U7NN@28211|Alphaproteobacteria,3JZ0E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tautomerase enzyme	-	-	-	-	-	-	-	-	-	-	-	-	Tautomerase_2
SX1_k127_4664921_4	1297865.APJD01000036_gene1448	2.336e-169	533.0	COG0583@1|root,COG0583@2|Bacteria,1MVKF@1224|Proteobacteria,2U0G8@28211|Alphaproteobacteria,3JRN4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Transcriptional regulator, LysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_4664921_8	1297865.APJD01000036_gene1449	8.072e-58	204.0	2AFNM@1|root,315Q5@2|Bacteria,1NEDB@1224|Proteobacteria,2UG19@28211|Alphaproteobacteria,3K418@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4664921_6	1297865.APJD01000036_gene1450	1.884e-104	342.0	2DR0Z@1|root,339QN@2|Bacteria,1Q1E1@1224|Proteobacteria,2UEP7@28211|Alphaproteobacteria,3K65G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2975)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2975
SX1_k127_4664921_10	1297865.APJD01000036_gene1451	6.862e-39	146.0	COG3655@1|root,COG3655@2|Bacteria,1N6VH@1224|Proteobacteria,2UFAM@28211|Alphaproteobacteria,3K0MQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Cro/C1-type HTH DNA-binding domain	-	-	-	ko:K07727	-	-	-	-	ko00000,ko03000	-	-	-	HTH_26
SX1_k127_4664921_11	1297865.APJD01000036_gene1452	4.527e-30	121.0	2AE6A@1|root,31402@2|Bacteria,1N8T1@1224|Proteobacteria,2UGXA@28211|Alphaproteobacteria,3K0W3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	YjfB_motility
SX1_k127_4664921_5	1297865.APJD01000036_gene1453	8.835e-143	453.0	COG0526@1|root,COG0526@2|Bacteria,1MZ5J@1224|Proteobacteria,2TR0C@28211|Alphaproteobacteria,3JWDM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CO	Thioredoxin-like	tlpA	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Redoxin
SX1_k127_4664921_0	1297865.APJD01000036_gene1454	3.213e-294	908.0	COG0165@1|root,COG0165@2|Bacteria,1MUTU@1224|Proteobacteria,2TR4H@28211|Alphaproteobacteria,3JQV1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	argininosuccinate lyase	argH	GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	4.3.2.1	ko:K01755	ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230	M00029,M00844,M00845	R01086	RC00445,RC00447	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	ASL_C2,Lyase_1
SX1_k127_4664921_9	1230476.C207_05122	6.569e-48	173.0	COG5567@1|root,COG5567@2|Bacteria,1NEKY@1224|Proteobacteria,2UHV1@28211|Alphaproteobacteria,3K094@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Prokaryotic lipoprotein-attachment site	-	-	-	-	-	-	-	-	-	-	-	-	LPAM_2
SX1_k127_4664921_2	1297865.APJD01000036_gene1456	1.679e-216	672.0	COG0019@1|root,COG0019@2|Bacteria,1MUA6@1224|Proteobacteria,2TQPB@28211|Alphaproteobacteria,3JU3D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine	lysA	GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008836,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	4.1.1.20	ko:K01586	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R00451	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	Orn_Arg_deC_N,Orn_DAP_Arg_deC
SX1_k127_466634_2	1230476.C207_05844	1.686e-60	212.0	COG1329@1|root,COG1329@2|Bacteria,1MWI2@1224|Proteobacteria,2TTVP@28211|Alphaproteobacteria,3JR9K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	CarD-like/TRCF domain	carD	-	-	ko:K07736	-	-	-	-	ko00000,ko03000	-	-	-	CarD_CdnL_TRCF
SX1_k127_466634_1	398525.KB900701_gene1154	4.824e-74	250.0	COG1146@1|root,COG1146@2|Bacteria,1RH5I@1224|Proteobacteria,2U98K@28211|Alphaproteobacteria,3JYTB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions	QU41_04200	-	-	ko:K05524	-	-	-	-	ko00000	-	-	-	DUF3470,Fer4
SX1_k127_466634_3	398525.KB900701_gene1155	6.2e-50	178.0	COG1188@1|root,COG1188@2|Bacteria,1MZR6@1224|Proteobacteria,2UBS3@28211|Alphaproteobacteria,3K08V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	S4 domain	hslR	-	-	ko:K04762	-	-	-	-	ko00000,ko03110	-	-	-	S4
SX1_k127_466634_0	1297865.APJD01000015_gene3418	0.0	2225.0	COG4581@1|root,COG4581@2|Bacteria,1MVD6@1224|Proteobacteria,2TR7N@28211|Alphaproteobacteria,3JTWZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	helicase superfamily c-terminal domain	mgpS	-	3.6.4.13	ko:K17675	-	-	-	-	ko00000,ko01000,ko03029	-	-	-	Helicase_C
SX1_k127_4667666_1	1297865.APJD01000005_gene3724	9.996e-216	669.0	COG1807@1|root,COG1807@2|Bacteria,1NSSV@1224|Proteobacteria,2TSZG@28211|Alphaproteobacteria,3JU5Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Dolichyl-phosphate-mannose-protein mannosyltransferase	MA20_15725	-	-	-	-	-	-	-	-	-	-	-	PMT_2
SX1_k127_4667666_2	1297865.APJD01000005_gene3723	9.235e-172	540.0	COG0235@1|root,COG0235@2|Bacteria,1MWP9@1224|Proteobacteria,2TRMV@28211|Alphaproteobacteria,3JSHD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Class II Aldolase and Adducin N-terminal domain	MA20_15730	-	-	-	-	-	-	-	-	-	-	-	Aldolase_II
SX1_k127_4667666_3	196490.AUEZ01000075_gene7651	2.439e-68	234.0	COG1943@1|root,COG1943@2|Bacteria,1RCWW@1224|Proteobacteria,2U5BB@28211|Alphaproteobacteria,3JY75@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Transposase IS200 like	-	-	-	ko:K07491	-	-	-	-	ko00000	-	-	-	Y1_Tnp
SX1_k127_4667666_4	1380355.JNIJ01000033_gene4251	1.613e-13	77.0	COG1943@1|root,COG1943@2|Bacteria,1RCWW@1224|Proteobacteria,2U5BB@28211|Alphaproteobacteria,3JY75@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Transposase IS200 like	-	-	-	ko:K07491	-	-	-	-	ko00000	-	-	-	Y1_Tnp
SX1_k127_4667666_0	1297865.APJD01000005_gene3722	2.192e-314	963.0	COG0624@1|root,COG0624@2|Bacteria,1MW20@1224|Proteobacteria,2TQY4@28211|Alphaproteobacteria,3JQX1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Peptidase dimerisation domain	MA20_15735	-	-	ko:K01436	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20
SX1_k127_4672040_1	1297865.APJD01000002_gene4158	2.063e-160	505.0	COG0494@1|root,COG0494@2|Bacteria,1NTFG@1224|Proteobacteria,2U0I4@28211|Alphaproteobacteria,3JRVS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Hydrolase	MA20_35615	-	-	-	-	-	-	-	-	-	-	-	NUDIX
SX1_k127_4672040_0	1297865.APJD01000002_gene4159	5.511e-177	557.0	COG0697@1|root,COG0697@2|Bacteria,1MXX1@1224|Proteobacteria,2TQN0@28211|Alphaproteobacteria,3JTCS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	MA20_35620	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_4672040_2	1297865.APJD01000002_gene4160	3.079e-111	361.0	COG2202@1|root,COG4191@1|root,COG2202@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TQTN@28211|Alphaproteobacteria,3JRHF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Histidine kinase	MA20_35625	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_4,PAS_8
SX1_k127_4675622_4	1297865.APJD01000006_gene4678	4.85e-108	358.0	COG3240@1|root,COG3240@2|Bacteria	2|Bacteria	I	lipase activity	-	-	-	ko:K12686	-	-	-	-	ko00000,ko02000,ko02044	1.B.12.8	-	-	Autotransporter,Lipase_GDSL,Lipase_GDSL_2,VPEP
SX1_k127_4675622_2	1297865.APJD01000006_gene4679	1.739e-155	492.0	COG0411@1|root,COG0411@2|Bacteria,1MVAU@1224|Proteobacteria,2TVRN@28211|Alphaproteobacteria,3JW0T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid ATP-binding cassette transporter	MA20_02440	-	-	ko:K01995	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_4675622_3	1297865.APJD01000006_gene4680	1.754e-142	454.0	COG0410@1|root,COG0410@2|Bacteria,1MVVC@1224|Proteobacteria,2TSA6@28211|Alphaproteobacteria,3JUSQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ATPases associated with a variety of cellular activities	MA20_02445	-	-	ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran
SX1_k127_4675622_1	1297865.APJD01000006_gene4681	1.128e-172	543.0	COG0559@1|root,COG0559@2|Bacteria,1R5H9@1224|Proteobacteria,2TUJ6@28211|Alphaproteobacteria,3JSHQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	MA20_02450	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_4675622_0	1297865.APJD01000006_gene4682	2.048e-205	658.0	COG4177@1|root,COG4177@2|Bacteria,1PAW4@1224|Proteobacteria,2U0EY@28211|Alphaproteobacteria,3JT01@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	MA20_02455	-	-	ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_4675622_5	1197906.CAJQ02000023_gene2368	1.734e-66	231.0	COG2326@1|root,COG2326@2|Bacteria,1MVE2@1224|Proteobacteria,2TSU8@28211|Alphaproteobacteria,3JTCM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Polyphosphate kinase 2 (PPK2)	-	-	-	-	-	-	-	-	-	-	-	-	PPK2
SX1_k127_4680726_1	1297865.APJD01000018_gene5672	1.514e-220	684.0	COG2141@1|root,COG2141@2|Bacteria,1MX64@1224|Proteobacteria,2TV8M@28211|Alphaproteobacteria,3JTR2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Luciferase-like monooxygenase	MA20_03405	-	-	-	-	-	-	-	-	-	-	-	Bac_luciferase
SX1_k127_4680726_0	1297865.APJD01000018_gene5671	3.78e-244	754.0	COG0507@1|root,COG0507@2|Bacteria,1MW43@1224|Proteobacteria,2TQWC@28211|Alphaproteobacteria,3JSER@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	UvrD-like helicase C-terminal domain	recD	-	3.1.11.5	ko:K01144	-	-	-	-	ko00000,ko01000	-	-	-	AAA_30,UvrD_C_2
SX1_k127_4680726_2	1297865.APJD01000018_gene5670	1.736e-145	462.0	COG0225@1|root,COG0225@2|Bacteria,1NC84@1224|Proteobacteria,2TTDD@28211|Alphaproteobacteria,3JTRK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine	msrA_1	-	1.8.4.11	ko:K07304	-	-	-	-	ko00000,ko01000	-	-	-	PMSR
SX1_k127_4680726_3	1297865.APJD01000018_gene5669	7.391e-92	301.0	COG0229@1|root,COG0229@2|Bacteria,1RGWC@1224|Proteobacteria,2U70T@28211|Alphaproteobacteria,3JY1U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Belongs to the MsrB Met sulfoxide reductase family	msrB	-	1.8.4.12	ko:K07305	-	-	-	-	ko00000,ko01000	-	-	-	SelR
SX1_k127_4683187_2	1297865.APJD01000075_gene2642	8.892e-15	77.0	COG2826@1|root,COG2826@2|Bacteria,1PP49@1224|Proteobacteria,2TRVA@28211|Alphaproteobacteria,3JZ7D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Integrase core domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_38,rve
SX1_k127_4683187_0	1297865.APJD01000028_gene5268	4.375e-195	609.0	COG0583@1|root,COG0583@2|Bacteria,1MU2E@1224|Proteobacteria,2TUNU@28211|Alphaproteobacteria,3JQPC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_4683187_1	1297865.APJD01000028_gene5267	1.054e-102	338.0	COG0667@1|root,COG0667@2|Bacteria,1MVEH@1224|Proteobacteria,2TRHS@28211|Alphaproteobacteria,3JVP4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldo keto reductase	-	-	1.1.1.65	ko:K05275	ko00750,ko01100,ko01120,map00750,map01100,map01120	-	R01708	RC00116	ko00000,ko00001,ko01000	-	-	-	Aldo_ket_red
SX1_k127_4685978_3	1297865.APJD01000023_gene1103	2.478e-95	314.0	COG1917@1|root,COG1917@2|Bacteria,1PX7F@1224|Proteobacteria,2TVA3@28211|Alphaproteobacteria,3JUHP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	AraC-like ligand binding domain	MA20_01180	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
SX1_k127_4685978_1	1297865.APJD01000023_gene1104	1.559e-214	670.0	COG2207@1|root,COG2207@2|Bacteria,1R81X@1224|Proteobacteria,2U0BK@28211|Alphaproteobacteria,3JVCY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	AraC-binding-like domain	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding_2,HTH_18
SX1_k127_4685978_4	1297865.APJD01000023_gene1105	4.668e-36	138.0	2AMST@1|root,31CP9@2|Bacteria,1P2PE@1224|Proteobacteria,2UVQE@28211|Alphaproteobacteria,3K4ZB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4685978_5	1230476.C207_05381	6.917e-22	102.0	2AQZ8@1|root,31G7Z@2|Bacteria,1P8W8@1224|Proteobacteria,2UYTY@28211|Alphaproteobacteria,3K5NJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4685978_2	1297865.APJD01000023_gene1106	1.361e-151	481.0	COG3637@1|root,COG3637@2|Bacteria,1R8ZN@1224|Proteobacteria,2U57I@28211|Alphaproteobacteria,3JXZG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	OmpA-like transmembrane domain	-	-	-	ko:K16079	-	-	-	-	ko00000,ko02000	1.B.4.2.1	-	-	OMP_b-brl
SX1_k127_4685978_0	1297865.APJD01000023_gene1107	0.0	1130.0	COG2067@1|root,COG2067@2|Bacteria,1R6CQ@1224|Proteobacteria,2TTSU@28211|Alphaproteobacteria,3JVVC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Putative beta-barrel porin-2, OmpL-like. bbp2	-	-	-	-	-	-	-	-	-	-	-	-	BBP2
SX1_k127_4689523_0	1297865.APJD01000033_gene7044	0.0	1633.0	COG0532@1|root,COG0532@2|Bacteria,1MV26@1224|Proteobacteria,2TQMY@28211|Alphaproteobacteria,3JRUZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex	infB	-	-	ko:K02519	-	-	-	-	ko00000,ko03012,ko03029	-	-	-	GTP_EFTU,GTP_EFTU_D2,IF-2,IF2_N,IF2_assoc
SX1_k127_4689523_2	1297865.APJD01000033_gene7043	1.629e-138	441.0	COG2740@1|root,COG2740@2|Bacteria,1RHPR@1224|Proteobacteria,2U9RY@28211|Alphaproteobacteria,3JUXE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Protein of unknown function (DUF448)	MA20_23920	-	-	ko:K07742	-	-	-	-	ko00000	-	-	-	DUF448,Ribosomal_L7Ae
SX1_k127_4689523_1	1297865.APJD01000033_gene7042	0.0	1025.0	COG0195@1|root,COG0195@2|Bacteria,1MWT7@1224|Proteobacteria,2TRQN@28211|Alphaproteobacteria,3JTAN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Participates in both transcription termination and antitermination	nusA	-	-	ko:K02600	-	-	-	-	ko00000,ko03009,ko03021	-	-	-	HHH_5,KH_5,NusA_N,S1
SX1_k127_4689523_3	1297865.APJD01000033_gene7041	5.321e-136	433.0	COG0779@1|root,COG0779@2|Bacteria,1RDP2@1224|Proteobacteria,2TS4E@28211|Alphaproteobacteria,3JTND@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Required for maturation of 30S ribosomal subunits	rimP	GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576	-	ko:K09748	-	-	-	-	ko00000,ko03009	-	-	-	DUF150,DUF150_C
SX1_k127_4691530_5	1230476.C207_03905	1.956e-15	77.0	COG1846@1|root,COG1846@2|Bacteria,1N1CJ@1224|Proteobacteria,2UCHN@28211|Alphaproteobacteria,3JUQW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	MA20_39375	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SX1_k127_4691530_0	1297865.APJD01000021_gene3044	0.0	1105.0	COG0654@1|root,COG0654@2|Bacteria,1MUN4@1224|Proteobacteria,2TQT8@28211|Alphaproteobacteria,3JSFW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	FAD binding domain	MA20_39380	-	1.14.13.127	ko:K05712	ko00360,ko01120,ko01220,map00360,map01120,map01220	M00545	R06786,R06787	RC00236	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_3
SX1_k127_4691530_4	1297865.APJD01000021_gene3043	7.878e-37	139.0	2E3JP@1|root,32YI0@2|Bacteria,1N6ZI@1224|Proteobacteria,2UF5U@28211|Alphaproteobacteria,3K0CN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2783)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2783
SX1_k127_4691530_2	1297865.APJD01000021_gene3042	6.902e-210	656.0	COG0491@1|root,COG0491@2|Bacteria,1MX4H@1224|Proteobacteria,2TQUY@28211|Alphaproteobacteria,3JT70@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metallo-beta-lactamase superfamily	MA20_39390	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
SX1_k127_4691530_1	1297865.APJD01000021_gene3041	9.731e-316	966.0	COG3508@1|root,COG3508@2|Bacteria,1MV9G@1224|Proteobacteria,2TRFI@28211|Alphaproteobacteria,3JS7Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate	hmgA	-	1.13.11.5	ko:K00451	ko00350,ko00643,ko01100,ko01120,map00350,map00643,map01100,map01120	M00044	R02519	RC00737	ko00000,ko00001,ko00002,ko01000	-	-	-	HgmA
SX1_k127_4691530_3	1297865.APJD01000021_gene3040	1.364e-93	307.0	COG0179@1|root,COG0179@2|Bacteria,1MW82@1224|Proteobacteria,2TRKH@28211|Alphaproteobacteria,3JT4J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Fumarylacetoacetase N-terminal	fahA	-	3.7.1.2	ko:K01555	ko00350,ko00643,ko01100,ko01120,map00350,map00643,map01100,map01120	M00044	R01364	RC00326,RC00446	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	FAA_hydrolase,FAA_hydrolase_N
SX1_k127_4703206_2	1297865.APJD01000009_gene2833	1.307e-112	364.0	COG2200@1|root,COG2200@2|Bacteria,1MU4F@1224|Proteobacteria,2TU9M@28211|Alphaproteobacteria,3JRX2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Putative diguanylate phosphodiesterase	MA20_05620	-	-	ko:K13593	ko04112,map04112	-	-	-	ko00000,ko00001	-	-	-	EAL
SX1_k127_4703206_1	1297865.APJD01000009_gene2834	6.184e-187	584.0	COG0647@1|root,COG0647@2|Bacteria,1MU9Y@1224|Proteobacteria,2TUH0@28211|Alphaproteobacteria,3JRWZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Haloacid dehalogenase-like hydrolase	MA20_05625	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_6,Hydrolase_like
SX1_k127_4703206_4	1230476.C207_03518	1.772e-77	261.0	COG0745@1|root,COG0745@2|Bacteria,1RDNP@1224|Proteobacteria,2U7BP@28211|Alphaproteobacteria,3JY5W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Response regulator receiver	QU41_12045	-	-	ko:K03413	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko02022,ko02035	-	-	-	Response_reg
SX1_k127_4703206_0	172088.AUGA01000023_gene652	2.586e-202	631.0	COG0196@1|root,COG0196@2|Bacteria,1MV9I@1224|Proteobacteria,2TTUY@28211|Alphaproteobacteria,3JTDM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Belongs to the ribF family	ribF	-	2.7.1.26,2.7.7.2	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R00161,R00549	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_syn,Flavokinase
SX1_k127_4703206_3	1297865.APJD01000009_gene2837	4.445e-106	346.0	COG0110@1|root,COG0110@2|Bacteria,1RA2T@1224|Proteobacteria,2U5F8@28211|Alphaproteobacteria,3JVXK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Maltose acetyltransferase	maa	-	2.3.1.79	ko:K00661	-	-	-	-	ko00000,ko01000	-	-	-	Hexapep,Hexapep_2,Mac
SX1_k127_4703206_5	398525.KB900701_gene2727	6.082e-24	101.0	COG0060@1|root,COG0060@2|Bacteria,1MVBQ@1224|Proteobacteria,2TR3N@28211|Alphaproteobacteria,3JRA9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)	ileS	-	6.1.1.5	ko:K01870	ko00970,map00970	M00359,M00360	R03656	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Anticodon_1,tRNA-synt_1,zf-FPG_IleRS
SX1_k127_4707872_2	1230476.C207_03870	5.523e-141	449.0	COG1596@1|root,COG1596@2|Bacteria,1MXYS@1224|Proteobacteria,2U93S@28211|Alphaproteobacteria,3JTS2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Polysaccharide biosynthesis/export protein	gumB	-	-	ko:K01991	ko02026,map02026	-	-	-	ko00000,ko00001,ko02000	1.B.18	-	-	Poly_export,SLBB
SX1_k127_4707872_1	1297865.APJD01000033_gene6987	4.94e-146	462.0	COG0412@1|root,COG0412@2|Bacteria,1MW7S@1224|Proteobacteria,2TTPH@28211|Alphaproteobacteria,3JRDU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Dienelactone hydrolase family	MA20_23640	-	3.1.1.45	ko:K01061	ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130	-	R03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222	RC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686	ko00000,ko00001,ko01000	-	-	-	DLH
SX1_k127_4707872_5	224911.27348412	3.884e-06	52.0	2978Y@1|root,2ZUGP@2|Bacteria,1RD02@1224|Proteobacteria,2U7VP@28211|Alphaproteobacteria,3JZ2X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4707872_3	1297865.APJD01000033_gene6986	9.481e-68	231.0	293I8@1|root,2ZR0B@2|Bacteria,1N2RQ@1224|Proteobacteria,2UC1W@28211|Alphaproteobacteria,3K0QX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4707872_0	1297865.APJD01000033_gene6985	2.944e-170	534.0	COG0596@1|root,COG0596@2|Bacteria,1Q4C8@1224|Proteobacteria,2TTW5@28211|Alphaproteobacteria,3JTEC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Serine aminopeptidase, S33	MA20_23630	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
SX1_k127_4707872_4	224911.27349090	5.611e-34	130.0	COG2080@1|root,COG2080@2|Bacteria,1RD8C@1224|Proteobacteria,2U6Z6@28211|Alphaproteobacteria,3JR0E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	1.3.99.16	ko:K00256,ko:K07302	-	-	-	-	ko00000,ko01000	-	-	-	Fer2,Fer2_2
SX1_k127_4710003_1	1297865.APJD01000001_gene6024	8.792e-210	654.0	COG2141@1|root,COG2141@2|Bacteria,1MVF0@1224|Proteobacteria,2TTR7@28211|Alphaproteobacteria,3JUZK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Luciferase-like monooxygenase	MA20_21365	-	-	-	-	-	-	-	-	-	-	-	Bac_luciferase
SX1_k127_4710003_0	1297865.APJD01000001_gene6025	4.104e-291	900.0	COG0626@1|root,COG0626@2|Bacteria,1MU57@1224|Proteobacteria,2TW14@28211|Alphaproteobacteria,3JR56@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Cys/Met metabolism PLP-dependent enzyme	mdeA	-	2.5.1.48,4.4.1.11	ko:K01739,ko:K01761	ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230	M00017	R00654,R00999,R01288,R02508,R03217,R03260,R04770,R04944,R04945,R04946	RC00020,RC00056,RC00069,RC00196,RC00348,RC00420,RC01209,RC01210,RC02848,RC02866	ko00000,ko00001,ko00002,ko01000	-	-	-	Cys_Met_Meta_PP
SX1_k127_4710003_5	1230476.C207_05295	1.242e-47	171.0	2EUI4@1|root,33N06@2|Bacteria,1N573@1224|Proteobacteria,2UCKD@28211|Alphaproteobacteria,3K05F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Peptidase propeptide and YPEB domain	-	-	-	-	-	-	-	-	-	-	-	-	PepSY_2
SX1_k127_4710003_3	1297865.APJD01000001_gene6027	3.793e-146	467.0	COG1940@1|root,COG1940@2|Bacteria,1NSQA@1224|Proteobacteria,2TSPZ@28211|Alphaproteobacteria,3JRYQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	GK	Transcriptional regulator sugar kinase	-	-	2.7.1.63	ko:K00886	ko00010,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00520,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R02187,R02189	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	ROK
SX1_k127_4710003_2	1297865.APJD01000001_gene6028	2.414e-146	465.0	COG2808@1|root,COG2808@2|Bacteria,1R4XU@1224|Proteobacteria,2TSU0@28211|Alphaproteobacteria,3JRRI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Putative FMN-binding domain	-	-	-	ko:K07734	-	-	-	-	ko00000,ko03000	-	-	-	FMN_bind_2
SX1_k127_4710003_6	1297865.APJD01000001_gene6029	9.158e-47	169.0	2AE90@1|root,31432@2|Bacteria,1N91P@1224|Proteobacteria,2UHHE@28211|Alphaproteobacteria,3K1P6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4710003_9	224911.27355455	9.335e-09	58.0	COG0840@1|root,COG2770@1|root,COG0840@2|Bacteria,COG2770@2|Bacteria,1MU9B@1224|Proteobacteria,2TQR7@28211|Alphaproteobacteria,3JSAR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NT	Double sensory domain of two-component sensor kinase	MA20_04120	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	HAMP,MCPsignal,dCache_3
SX1_k127_4710003_7	398525.KB900701_gene4628	4.567e-29	118.0	2EGKD@1|root,33ACM@2|Bacteria,1NAVJ@1224|Proteobacteria,2UGT0@28211|Alphaproteobacteria,3K14N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4710003_4	1297865.APJD01000001_gene6031	1.631e-111	361.0	COG2240@1|root,COG2240@2|Bacteria,1MVC9@1224|Proteobacteria,2U2CH@28211|Alphaproteobacteria,3JSTJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Phosphomethylpyrimidine kinase	MA20_28940	-	2.7.1.35	ko:K00868	ko00750,ko01100,map00750,map01100	-	R00174,R01909,R02493	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	Phos_pyr_kin
SX1_k127_4718537_6	1297865.APJD01000047_gene4801	6.884e-84	280.0	COG0438@1|root,COG0438@2|Bacteria,1MY5T@1224|Proteobacteria,2TSZW@28211|Alphaproteobacteria,3JRMR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
SX1_k127_4718537_0	1297865.APJD01000047_gene4802	0.0	1207.0	COG1086@1|root,COG1086@2|Bacteria,1MWKY@1224|Proteobacteria,2TT4K@28211|Alphaproteobacteria,3JR9W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	GM	Polysaccharide biosynthesis protein	MA20_07945	-	-	ko:K13013	-	-	-	-	ko00000,ko01005	-	-	-	CoA_binding_3,Polysacc_synt_2
SX1_k127_4718537_2	1297865.APJD01000047_gene4803	3.175e-261	809.0	COG3307@1|root,COG3307@2|Bacteria,1R495@1224|Proteobacteria,2TQUQ@28211|Alphaproteobacteria,3JTQD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	O-Antigen ligase	-	-	-	-	-	-	-	-	-	-	-	-	Wzy_C
SX1_k127_4718537_1	1297865.APJD01000047_gene4804	9.86e-309	947.0	COG0615@1|root,COG2870@1|root,COG0615@2|Bacteria,COG2870@2|Bacteria,1MV3Z@1224|Proteobacteria,2TU12@28211|Alphaproteobacteria,3JSR3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose	hldE	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0019200,GO:0044237,GO:0044238,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0046835,GO:0071704	2.7.1.167,2.7.7.70	ko:K03272	ko00540,ko01100,map00540,map01100	M00064	R05644,R05646	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	CTP_transf_like,PfkB
SX1_k127_4718537_4	1297865.APJD01000047_gene4805	5.511e-206	644.0	COG0451@1|root,COG0451@2|Bacteria,1MVE4@1224|Proteobacteria,2TQJI@28211|Alphaproteobacteria,3JU88@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	GM	Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose	hldD	-	5.1.3.2,5.1.3.20	ko:K01784,ko:K03274	ko00052,ko00520,ko00540,ko01100,map00052,map00520,map00540,map01100	M00064,M00361,M00362,M00632	R00291,R02984,R05176	RC00289,RC01291	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	Epimerase
SX1_k127_4718537_7	1230476.C207_01313	4.62e-16	79.0	COG0859@1|root,COG0859@2|Bacteria,1MXA2@1224|Proteobacteria,2TSXD@28211|Alphaproteobacteria,3JU3C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Glycosyltransferase family 9 (heptosyltransferase)	rfaF	-	-	ko:K02843	ko00540,ko01100,map00540,map01100	M00080	-	-	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT9	-	Glyco_transf_9
SX1_k127_4718537_3	1297865.APJD01000047_gene4806	1.169e-219	717.0	COG0859@1|root,COG0859@2|Bacteria,1MXA2@1224|Proteobacteria,2TSXD@28211|Alphaproteobacteria,3JU3C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Glycosyltransferase family 9 (heptosyltransferase)	rfaF	-	-	ko:K02843	ko00540,ko01100,map00540,map01100	M00080	-	-	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005	-	GT9	-	Glyco_transf_9
SX1_k127_4718537_5	224914.BMEI0509	9.305e-86	293.0	COG0438@1|root,COG0438@2|Bacteria,1MU9C@1224|Proteobacteria,2TQJM@28211|Alphaproteobacteria,1J1W0@118882|Brucellaceae	28211|Alphaproteobacteria	M	Glycosyl transferases group 1	lpcC	-	-	ko:K12989	-	-	-	-	ko00000,ko01000,ko01003,ko01005	-	GT4	-	Glycos_transf_1
SX1_k127_4723585_11	1297865.APJD01000019_gene3132	4.892e-55	192.0	COG0347@1|root,COG0347@2|Bacteria,1RGWK@1224|Proteobacteria,2U952@28211|Alphaproteobacteria,3JYRV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Belongs to the P(II) protein family	glnK	-	-	ko:K04751,ko:K04752	ko02020,map02020	-	-	-	ko00000,ko00001	-	-	-	P-II
SX1_k127_4723585_1	1297865.APJD01000019_gene3131	1.93e-271	839.0	COG0004@1|root,COG0004@2|Bacteria,1NR9F@1224|Proteobacteria,2TT2J@28211|Alphaproteobacteria,3JQXC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Ammonium Transporter	MA20_24940	-	-	ko:K03320	-	-	-	-	ko00000,ko02000	1.A.11	-	-	Ammonium_transp
SX1_k127_4723585_10	319003.Bra1253DRAFT_05038	1.086e-64	226.0	COG0640@1|root,COG0640@2|Bacteria,1RHCK@1224|Proteobacteria,2U9S5@28211|Alphaproteobacteria,3JYSU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20
SX1_k127_4723585_8	1297865.APJD01000019_gene3129	6.882e-71	243.0	COG3832@1|root,COG3832@2|Bacteria,1N064@1224|Proteobacteria,2UEHZ@28211|Alphaproteobacteria,3JYX5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	glyoxalase III activity	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
SX1_k127_4723585_5	1297865.APJD01000019_gene3128	6.92e-126	404.0	COG0740@1|root,COG0740@2|Bacteria,1MV46@1224|Proteobacteria,2U07E@28211|Alphaproteobacteria,3JTVY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	OU	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins	clpP1	-	3.4.21.92	ko:K01358	ko04112,ko04212,map04112,map04212	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	CLP_protease
SX1_k127_4723585_9	224911.27348861	9.518e-67	228.0	COG0347@1|root,COG0347@2|Bacteria,1RGWK@1224|Proteobacteria,2U952@28211|Alphaproteobacteria,3JYV3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Belongs to the P(II) protein family	glnK	-	-	ko:K04751,ko:K04752	ko02020,map02020	-	-	-	ko00000,ko00001	-	-	-	P-II
SX1_k127_4723585_0	1297865.APJD01000019_gene3126	6.464e-308	944.0	COG0004@1|root,COG0004@2|Bacteria,1NR9F@1224|Proteobacteria,2TT2J@28211|Alphaproteobacteria,3JTTP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Ammonium Transporter	amtB	GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0008519,GO:0015075,GO:0015291,GO:0015292,GO:0015669,GO:0015670,GO:0015696,GO:0015893,GO:0016020,GO:0016021,GO:0019755,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072488,GO:0098655	-	ko:K03320	-	-	-	-	ko00000,ko02000	1.A.11	-	-	Ammonium_transp
SX1_k127_4723585_7	1297865.APJD01000019_gene3125	1.943e-89	295.0	COG3791@1|root,COG3791@2|Bacteria,1RAJQ@1224|Proteobacteria,2U5ME@28211|Alphaproteobacteria,3JY8E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Glutathione-dependent formaldehyde-activating enzyme	-	-	-	-	-	-	-	-	-	-	-	-	GFA
SX1_k127_4723585_4	1297865.APJD01000019_gene3124	6.844e-154	493.0	COG2199@1|root,COG2199@2|Bacteria,1RBN7@1224|Proteobacteria,2U6FT@28211|Alphaproteobacteria,3JYNX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Diguanylate cyclase	-	-	-	-	-	-	-	-	-	-	-	-	GGDEF
SX1_k127_4723585_6	1297865.APJD01000019_gene3123	2.71e-103	337.0	COG1051@1|root,COG1051@2|Bacteria,1RH1H@1224|Proteobacteria,2U6J2@28211|Alphaproteobacteria,3JYB7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	NUDIX domain	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
SX1_k127_4723585_2	1297865.APJD01000019_gene3122	3.346e-266	821.0	COG0436@1|root,COG0436@2|Bacteria,1MWS8@1224|Proteobacteria,2TQVM@28211|Alphaproteobacteria,3JUEF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Aminotransferase class I and II	dapL	-	2.6.1.17	ko:K14261,ko:K14267	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	M00016	R04475	RC00006	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
SX1_k127_4723585_3	1297865.APJD01000019_gene3121	6.647e-186	584.0	COG1674@1|root,COG1674@2|Bacteria,1MVPI@1224|Proteobacteria,2TR48@28211|Alphaproteobacteria,3JTM7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Ftsk_gamma	ftsK	-	-	ko:K03466	-	-	-	-	ko00000,ko03036	3.A.12	-	-	FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma
SX1_k127_4729709_4	1297865.APJD01000003_gene6137	4.089e-28	113.0	COG1136@1|root,COG1136@2|Bacteria,1NCFC@1224|Proteobacteria,2TSNF@28211|Alphaproteobacteria,3JV6H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	ABC transporter	MA20_22875	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
SX1_k127_4729709_0	1297865.APJD01000003_gene6136	0.0	1557.0	COG0577@1|root,COG0577@2|Bacteria,1MVCT@1224|Proteobacteria,2TSPH@28211|Alphaproteobacteria,3JTE5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	FtsX-like permease family	attG	-	-	ko:K02004	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	FtsX,MacB_PCD
SX1_k127_4729709_2	1038860.AXAP01000059_gene1448	4.06e-185	583.0	COG5621@1|root,COG5621@2|Bacteria,1MUVF@1224|Proteobacteria,2TSVN@28211|Alphaproteobacteria,3JRBC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Lipocalin-like domain	-	-	-	-	-	-	-	-	-	-	-	-	CrtC,Lipocalin_9
SX1_k127_4729709_3	1297865.APJD01000003_gene6134	3.744e-79	266.0	COG3788@1|root,COG3788@2|Bacteria,1NBHH@1224|Proteobacteria,2UA0K@28211|Alphaproteobacteria,3JYVE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	MAPEG family	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	MAPEG
SX1_k127_4729709_1	1230476.C207_04002	1.056e-250	775.0	COG0683@1|root,COG0683@2|Bacteria,1MUCB@1224|Proteobacteria,2TRWV@28211|Alphaproteobacteria,3JR9V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein	MA20_22895	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_4733235_5	1297865.APJD01000009_gene2911	9.227e-125	402.0	COG1835@1|root,COG1835@2|Bacteria,1R8NZ@1224|Proteobacteria,2VF3I@28211|Alphaproteobacteria,3JTFB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
SX1_k127_4733235_1	1297865.APJD01000009_gene2912	5e-324	992.0	COG0277@1|root,COG0277@2|Bacteria,1MU6Y@1224|Proteobacteria,2TSG6@28211|Alphaproteobacteria,3JRIA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	FAD linked oxidases, C-terminal domain	glcD	-	1.1.3.15	ko:K00104	ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130	-	R00475	RC00042	ko00000,ko00001,ko01000	-	-	-	FAD-oxidase_C,FAD_binding_4
SX1_k127_4733235_7	1297865.APJD01000009_gene2913	6.033e-76	261.0	COG3474@1|root,COG3474@2|Bacteria,1MZGS@1224|Proteobacteria,2UCUT@28211|Alphaproteobacteria,3JY3A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome c	cycA	GO:0005575,GO:0005623,GO:0042597,GO:0044464	-	ko:K08738	ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	3.D.4.6	-	-	Cytochrom_C
SX1_k127_4733235_0	1297865.APJD01000009_gene2914	0.0	1163.0	COG0028@1|root,COG0028@2|Bacteria,1MWKP@1224|Proteobacteria,2TQK6@28211|Alphaproteobacteria,3JTPN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Thiamine pyrophosphate enzyme, central domain	poxB	-	1.2.3.3,1.2.5.1	ko:K00156,ko:K00158	ko00620,ko01100,map00620,map01100	-	R00207,R03145	RC00860,RC02745	ko00000,ko00001,ko01000	-	-	-	Rieske,TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
SX1_k127_4733235_3	1297865.APJD01000009_gene2915	1.845e-197	625.0	COG2267@1|root,COG2267@2|Bacteria,1MW9H@1224|Proteobacteria,2U1YC@28211|Alphaproteobacteria,3JUEG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6
SX1_k127_4733235_8	1297865.APJD01000009_gene2916	1.651e-55	198.0	2DMHT@1|root,32RN3@2|Bacteria,1N0KK@1224|Proteobacteria,2UCFK@28211|Alphaproteobacteria,3JZ5E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_36130	-	-	-	-	-	-	-	-	-	-	-	PEGA
SX1_k127_4733235_9	1297865.APJD01000009_gene2917	2.368e-28	117.0	2AE82@1|root,31422@2|Bacteria,1N8YS@1224|Proteobacteria,2UF9C@28211|Alphaproteobacteria,3K0YY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_05970	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4733235_4	1297865.APJD01000009_gene2918	3.14e-136	436.0	COG0457@1|root,COG0457@2|Bacteria,1N0DE@1224|Proteobacteria,2UCGA@28211|Alphaproteobacteria,3JTSW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tetratricopeptide repeat	MA20_05980	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_2,TPR_6,TPR_8
SX1_k127_4733235_10	504832.OCAR_5080	5.728e-19	86.0	COG0257@1|root,COG0257@2|Bacteria,1NGBJ@1224|Proteobacteria,2UJAG@28211|Alphaproteobacteria,3K1QP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the bacterial ribosomal protein bL36 family	rpmJ	-	-	ko:K02919	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L36
SX1_k127_4733235_2	1297865.APJD01000009_gene2920	1.225e-199	625.0	COG2159@1|root,COG2159@2|Bacteria,1MUUR@1224|Proteobacteria,2TSQB@28211|Alphaproteobacteria,3JVK7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Amidohydrolase	MA20_05990	-	-	ko:K07045	-	-	-	-	ko00000	-	-	-	Amidohydro_2
SX1_k127_4733235_6	1297865.APJD01000009_gene2921	7.384e-117	377.0	COG1011@1|root,COG1011@2|Bacteria,1MVWN@1224|Proteobacteria,2TS5K@28211|Alphaproteobacteria,3JQRH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Haloacid dehalogenase-like hydrolase	MA20_05995	-	3.8.1.2	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	-	R05287	RC00697	ko00000,ko00001,ko01000	-	-	-	HAD_2,Hydrolase
SX1_k127_4742855_2	1297865.APJD01000019_gene3224	2.173e-67	229.0	COG0479@1|root,COG0479@2|Bacteria,1MVHS@1224|Proteobacteria,2TQYF@28211|Alphaproteobacteria,3JS07@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family	sdhB	-	1.3.5.1,1.3.5.4	ko:K00240	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2_3,Fer4_10,Fer4_17,Fer4_8
SX1_k127_4742855_0	1297865.APJD01000019_gene3225	0.0	1272.0	COG1053@1|root,COG1053@2|Bacteria,1MU5M@1224|Proteobacteria,2TQJA@28211|Alphaproteobacteria,3JR6R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily	sdhA	-	1.3.5.1,1.3.5.4	ko:K00239	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_2,Succ_DH_flav_C
SX1_k127_4742855_1	1230476.C207_04737	6.123e-68	233.0	COG2142@1|root,COG2142@2|Bacteria,1MZND@1224|Proteobacteria,2UC3G@28211|Alphaproteobacteria,3JYRC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	succinate dehydrogenase	sdhD	-	-	ko:K00242	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00149,M00173	R02164	RC00045	ko00000,ko00001,ko00002	-	-	-	Sdh_cyt
SX1_k127_4742855_3	1297865.APJD01000019_gene3227	2.74e-41	151.0	COG2009@1|root,COG2009@2|Bacteria,1N02N@1224|Proteobacteria,2UC47@28211|Alphaproteobacteria,3JYZ2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	succinate dehydrogenase	sdhC	-	-	ko:K00241	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002	-	-	-	Sdh_cyt
SX1_k127_4747651_2	1230476.C207_01855	4.053e-175	549.0	COG3000@1|root,COG3000@2|Bacteria,1R4RM@1224|Proteobacteria,2TRCM@28211|Alphaproteobacteria,3JW9S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Fatty acid hydroxylase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
SX1_k127_4747651_7	1297865.APJD01000005_gene3848	1.782e-36	138.0	2FKPB@1|root,31QNX@2|Bacteria,1N2D9@1224|Proteobacteria,2UEZM@28211|Alphaproteobacteria,3K0PW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4747651_6	1297865.APJD01000005_gene3849	1.896e-66	231.0	2E8MD@1|root,332YV@2|Bacteria,1MYV4@1224|Proteobacteria,2UBE6@28211|Alphaproteobacteria,3JZY9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4747651_1	1297865.APJD01000005_gene3850	7.297e-242	748.0	COG1062@1|root,COG1062@2|Bacteria,1MUK4@1224|Proteobacteria,2TU1G@28211|Alphaproteobacteria,3JU3K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	alcohol dehydrogenase	-	-	1.1.1.1,1.1.1.284	ko:K00121	ko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204	-	R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R06983,R07105,R08281,R08306,R08310	RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01715,RC01734,RC02273	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_zinc_N
SX1_k127_4747651_3	1297865.APJD01000005_gene3851	2.424e-144	460.0	COG1802@1|root,COG1802@2|Bacteria,1RKMP@1224|Proteobacteria,2UAUH@28211|Alphaproteobacteria,3JTM6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FCD	-	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SX1_k127_4747651_0	1297865.APJD01000005_gene3852	2.303e-302	929.0	COG2271@1|root,COG2271@2|Bacteria,1P24P@1224|Proteobacteria,2TWZS@28211|Alphaproteobacteria,3K6QJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Uncharacterised MFS-type transporter YbfB	-	-	-	ko:K08369	-	-	-	-	ko00000,ko02000	2.A.1	-	-	MFS_1,MFS_4,Sugar_tr
SX1_k127_4747651_5	1297865.APJD01000005_gene3853	1.879e-73	250.0	29ZDC@1|root,30MC8@2|Bacteria,1RESS@1224|Proteobacteria,2U7RD@28211|Alphaproteobacteria,3JZ8I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4747651_4	1297865.APJD01000005_gene3854	2.183e-121	391.0	COG1432@1|root,COG1432@2|Bacteria,1MX5C@1224|Proteobacteria,2TRE6@28211|Alphaproteobacteria,3JT11@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	OST-HTH/LOTUS domain	MA20_15040	-	-	-	-	-	-	-	-	-	-	-	NYN,OST-HTH
SX1_k127_4753795_2	1297865.APJD01000003_gene6402	4.468e-42	154.0	COG0591@1|root,COG0642@1|root,COG0784@1|root,COG0591@2|Bacteria,COG0784@2|Bacteria,COG2205@2|Bacteria,1MUY7@1224|Proteobacteria,2TR1M@28211|Alphaproteobacteria,3JTFW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Histidine kinase	MA20_19630	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_7,Response_reg
SX1_k127_4753795_0	1297865.APJD01000003_gene6401	2.213e-283	877.0	COG0477@1|root,COG2814@2|Bacteria,1MX1Q@1224|Proteobacteria,2TY3F@28211|Alphaproteobacteria,3K3P5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_4753795_1	1297865.APJD01000003_gene6400	5.998e-118	381.0	COG2345@1|root,COG2345@2|Bacteria,1RDXT@1224|Proteobacteria,2U1K1@28211|Alphaproteobacteria,3K1UC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	HTH_11,HTH_5,MarR_2,PadR,Replic_Relax
SX1_k127_4753795_3	1297865.APJD01000003_gene6399	2.528e-16	78.0	COG2197@1|root,COG2197@2|Bacteria,1P4TD@1224|Proteobacteria,2U06A@28211|Alphaproteobacteria,3JSMM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	transcriptional regulator, LuxR family	MA20_19670	GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
SX1_k127_4761701_3	1297865.APJD01000003_gene6489	3.293e-285	877.0	COG0457@1|root,COG0457@2|Bacteria,1R6ZR@1224|Proteobacteria,2U1T5@28211|Alphaproteobacteria,3JWHB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	DUF4071
SX1_k127_4761701_8	1297865.APJD01000003_gene6488	2.738e-125	402.0	COG0457@1|root,COG0457@2|Bacteria,1R48M@1224|Proteobacteria,2TTU6@28211|Alphaproteobacteria,3JXZ5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4761701_4	1297865.APJD01000003_gene6487	6.16e-253	781.0	COG3621@1|root,COG3621@2|Bacteria,1R852@1224|Proteobacteria,2U354@28211|Alphaproteobacteria,3JX37@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Patatin-like phospholipase	-	-	-	-	-	-	-	-	-	-	-	-	Patatin
SX1_k127_4761701_2	1297865.APJD01000003_gene6486	3.277e-302	928.0	2A5UZ@1|root,30UKR@2|Bacteria,1R3W4@1224|Proteobacteria,2TSQP@28211|Alphaproteobacteria,3JXB4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	TIR_2
SX1_k127_4761701_7	1297865.APJD01000003_gene6485	5.326e-128	412.0	297U8@1|root,2ZV0W@2|Bacteria,1MVMY@1224|Proteobacteria,2U29E@28211|Alphaproteobacteria,3JR5G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4761701_9	172088.AUGA01000001_gene6384	6.932e-50	179.0	2ABSN@1|root,31195@2|Bacteria,1N44Y@1224|Proteobacteria,2UDIE@28211|Alphaproteobacteria,3K0I2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_20830	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4761701_5	1230476.C207_02610	2.72e-206	646.0	COG2070@1|root,COG2070@2|Bacteria,1MU0U@1224|Proteobacteria,2TRZS@28211|Alphaproteobacteria,3JU2E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Nitronate monooxygenase	-	-	1.13.12.16	ko:K00459	ko00910,map00910	-	R00025	RC02541,RC02759	ko00000,ko00001,ko01000	-	-	-	NMO
SX1_k127_4761701_1	1297865.APJD01000003_gene6482	0.0	1058.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JQTA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	MA20_20840	-	-	ko:K00666	-	-	-	-	ko00000,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_4761701_0	1297865.APJD01000003_gene6481	0.0	1397.0	COG4191@1|root,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TQQ9@28211|Alphaproteobacteria,3JR0R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Response regulator receiver	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_3,PAS_4,Response_reg
SX1_k127_4761701_6	1297865.APJD01000003_gene6480	4.577e-151	478.0	COG2050@1|root,COG2050@2|Bacteria,1N57X@1224|Proteobacteria,2TVFU@28211|Alphaproteobacteria,3JS6X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Thioesterase-like superfamily	-	-	-	-	-	-	-	-	-	-	-	-	4HBT_3
SX1_k127_4769024_4	1297865.APJD01000014_gene617	5.492e-248	767.0	COG4591@1|root,COG4591@2|Bacteria,1MVV7@1224|Proteobacteria,2U46C@28211|Alphaproteobacteria,3JXZX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	MacB-like periplasmic core domain	-	-	-	ko:K09808	ko02010,map02010	M00255	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.125	-	-	FtsX,MacB_PCD
SX1_k127_4769024_2	1297865.APJD01000014_gene618	9.78e-273	858.0	COG0665@1|root,COG0665@2|Bacteria,1MVIZ@1224|Proteobacteria,2TSQI@28211|Alphaproteobacteria,3JSP6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	FAD dependent oxidoreductase	MA20_00655	-	1.4.5.1	ko:K00285	ko00360,map00360	-	R01374,R09493	RC00006,RC00025	ko00000,ko00001,ko01000	-	-	-	DAO
SX1_k127_4769024_0	1297865.APJD01000014_gene619	0.0	1126.0	COG0028@1|root,COG0028@2|Bacteria,1MU6U@1224|Proteobacteria,2TSB1@28211|Alphaproteobacteria,3JTWC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Thiamine pyrophosphate enzyme, central domain	MA20_00650	-	2.2.1.6	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R00006,R00014,R00226,R03050,R04672,R04673,R08648	RC00027,RC00106,RC01192,RC02744,RC02893	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
SX1_k127_4769024_5	1230476.C207_06853	5.159e-243	751.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TR15@28211|Alphaproteobacteria,3JSF6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	MA20_40160	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_4769024_7	1297865.APJD01000014_gene621	1.855e-170	536.0	COG1028@1|root,COG1028@2|Bacteria,1MXFZ@1224|Proteobacteria,2TQZ9@28211|Alphaproteobacteria,3JWQH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	-	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
SX1_k127_4769024_12	1297865.APJD01000014_gene622	1.459e-80	277.0	COG2030@1|root,COG2030@2|Bacteria,1RD6F@1224|Proteobacteria,2UC91@28211|Alphaproteobacteria,3JZ3D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	MaoC like domain	-	-	-	-	-	-	-	-	-	-	-	-	MaoC_dehydratas
SX1_k127_4769024_11	1297865.APJD01000014_gene623	8.662e-92	302.0	COG2030@1|root,COG2030@2|Bacteria,1RJ2Z@1224|Proteobacteria,2U5QB@28211|Alphaproteobacteria,3JY70@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	N-terminal half of MaoC dehydratase	-	-	-	-	-	-	-	-	-	-	-	-	MaoC_dehydrat_N
SX1_k127_4769024_3	1297865.APJD01000014_gene624	3.177e-260	802.0	COG0183@1|root,COG0183@2|Bacteria,1MU8C@1224|Proteobacteria,2TS6P@28211|Alphaproteobacteria,3JQWY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Thiolase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Thiolase_C,Thiolase_N
SX1_k127_4769024_10	1298867.AUES01000026_gene3051	4.67e-92	310.0	COG1309@1|root,COG1309@2|Bacteria,1MY9K@1224|Proteobacteria,2U3PH@28211|Alphaproteobacteria,3JXKW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_4769024_1	1297865.APJD01000014_gene626	0.0	1043.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JTV9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	-	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
SX1_k127_4769024_9	1297865.APJD01000014_gene627	4.132e-133	424.0	2BZNP@1|root,30717@2|Bacteria,1REWN@1224|Proteobacteria,2U7X0@28211|Alphaproteobacteria,3JV83@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2889)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2889
SX1_k127_4769024_6	1297865.APJD01000014_gene628	1.075e-176	556.0	COG0697@1|root,COG0697@2|Bacteria,1RI87@1224|Proteobacteria,2UAJW@28211|Alphaproteobacteria,3JW3Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	MA20_28970	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_4769024_8	1297865.APJD01000014_gene629	4.234e-142	452.0	COG1028@1|root,COG1028@2|Bacteria,1PKAZ@1224|Proteobacteria,2TS5J@28211|Alphaproteobacteria,3JQPW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	MA20_06640	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short,adh_short_C2
SX1_k127_4769024_13	258594.RPA4595	8.504e-21	94.0	COG0318@1|root,COG0318@2|Bacteria,1R3S7@1224|Proteobacteria,2TQPW@28211|Alphaproteobacteria,3JTXP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	MA20_06645	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_4770677_1	1297865.APJD01000049_gene5524	1.396e-181	570.0	COG0583@1|root,COG0583@2|Bacteria,1MV0Z@1224|Proteobacteria,2VEWX@28211|Alphaproteobacteria,3K6DY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	ko:K21757	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
SX1_k127_4770677_0	1297865.APJD01000049_gene5525	4.261e-207	663.0	COG2267@1|root,COG2267@2|Bacteria,1QVK5@1224|Proteobacteria,2TWH1@28211|Alphaproteobacteria,3JQT4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6
SX1_k127_4770677_3	1297865.APJD01000049_gene5526	7.793e-92	305.0	2CPI3@1|root,32SJ7@2|Bacteria,1N1IR@1224|Proteobacteria,2UBVS@28211|Alphaproteobacteria,3JX44@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF992)	MA20_05225	-	-	-	-	-	-	-	-	-	-	-	DUF992
SX1_k127_4770677_2	1230476.C207_06113	2.576e-97	324.0	2CPI3@1|root,32SJ7@2|Bacteria,1N1IR@1224|Proteobacteria,2UBVS@28211|Alphaproteobacteria,3JZ8B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF992)	-	-	-	-	-	-	-	-	-	-	-	-	DUF992
SX1_k127_4770677_4	1297865.APJD01000049_gene5528	4.303e-56	196.0	COG0436@1|root,COG0436@2|Bacteria,1MW0Z@1224|Proteobacteria,2TRPK@28211|Alphaproteobacteria,3JTIB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	DegT/DnrJ/EryC1/StrS aminotransferase family	aatA	-	2.6.1.1	ko:K00812	ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	-	R00355,R00694,R00734,R00896,R02433,R02619,R05052	RC00006	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_1_2
SX1_k127_4779438_1	1297865.APJD01000022_gene352	1.019e-227	706.0	COG2982@1|root,COG2982@2|Bacteria,1NVUY@1224|Proteobacteria,2TVI7@28211|Alphaproteobacteria,3JQXF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	AsmA-like C-terminal region	MA20_03680	-	-	ko:K07289	-	-	-	-	ko00000	-	-	-	AsmA,AsmA_2
SX1_k127_4779438_0	1297865.APJD01000022_gene351	5.106e-313	961.0	COG1653@1|root,COG1653@2|Bacteria,1R0XV@1224|Proteobacteria,2TU4B@28211|Alphaproteobacteria,3JSKU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Bacterial extracellular solute-binding protein	MA20_03685	-	-	ko:K02027	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	SBP_bac_8
SX1_k127_4779438_2	1297865.APJD01000022_gene350	1.804e-188	589.0	COG1175@1|root,COG1175@2|Bacteria,1P9M5@1224|Proteobacteria,2TU2U@28211|Alphaproteobacteria,3JW1F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Binding-protein-dependent transport system inner membrane component	MA20_03690	-	-	ko:K02025	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	BPD_transp_1
SX1_k127_4779438_3	1297865.APJD01000022_gene349	4.87e-105	357.0	COG0395@1|root,COG0395@2|Bacteria,1QW7F@1224|Proteobacteria,2TR3V@28211|Alphaproteobacteria,3JSTC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Binding-protein-dependent transport system inner membrane component	MA20_03695	-	-	ko:K02026	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	BPD_transp_1
SX1_k127_4781680_2	114615.BRADO3920	3.97e-06	49.0	COG4953@1|root,COG4953@2|Bacteria,1MUA9@1224|Proteobacteria,2TR2R@28211|Alphaproteobacteria,3JS2X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Penicillin-Binding Protein C-terminus Family	pbpC	-	2.4.1.129	ko:K05367	ko00550,map00550	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	BiPBP_C,Transgly,Transpeptidase
SX1_k127_4781680_0	1297865.APJD01000014_gene749	0.0	1963.0	COG3468@1|root,COG3468@2|Bacteria,1R8WV@1224|Proteobacteria,2U0JK@28211|Alphaproteobacteria,3JUMT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	MU	Autotransporter beta-domain	-	-	-	ko:K19231	-	-	-	-	ko00000,ko02000	1.B.12	-	-	Autotransporter,PATR,Pertactin
SX1_k127_4781680_1	1297865.APJD01000014_gene748	1.807e-40	153.0	COG2114@1|root,COG2114@2|Bacteria,1MWHK@1224|Proteobacteria,2TR2J@28211|Alphaproteobacteria,3JQWW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
SX1_k127_4782458_0	1297865.APJD01000020_gene15	0.0	1214.0	COG0317@1|root,COG0317@2|Bacteria,1MU44@1224|Proteobacteria,2TQNY@28211|Alphaproteobacteria,3JRT7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KT	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance	spoT	-	2.7.6.5,3.1.7.2	ko:K00951,ko:K01139	ko00230,map00230	-	R00336,R00429	RC00002,RC00078	ko00000,ko00001,ko01000,ko03009	-	-	-	ACT_4,HD_4,RelA_SpoT,TGS
SX1_k127_4782458_4	1297865.APJD01000020_gene16	5.657e-164	516.0	COG0854@1|root,COG0854@2|Bacteria,1MU9W@1224|Proteobacteria,2TTTF@28211|Alphaproteobacteria,3JSGR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate	pdxJ	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617	2.6.99.2	ko:K03474	ko00750,ko01100,map00750,map01100	M00124	R05838	RC01476	ko00000,ko00001,ko00002,ko01000	-	-	-	PdxJ
SX1_k127_4782458_7	1297865.APJD01000020_gene17	1.09e-81	274.0	COG0736@1|root,COG0736@2|Bacteria,1MZBF@1224|Proteobacteria,2U77S@28211|Alphaproteobacteria,3JY1K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein	acpS	-	2.7.8.7	ko:K00997	ko00770,map00770	-	R01625	RC00002	ko00000,ko00001,ko01000	-	-	-	ACPS
SX1_k127_4782458_3	1297865.APJD01000020_gene18	9.292e-169	533.0	COG0681@1|root,COG0681@2|Bacteria,1MXUF@1224|Proteobacteria,2TR9N@28211|Alphaproteobacteria,3JUV2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Belongs to the peptidase S26 family	lepB	-	3.4.21.89	ko:K03100	ko02024,ko03060,map02024,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S24,Peptidase_S26
SX1_k127_4782458_6	1298867.AUES01000004_gene539	7.024e-127	415.0	COG0571@1|root,COG0571@2|Bacteria,1MUQ6@1224|Proteobacteria,2TTIA@28211|Alphaproteobacteria,3JTYS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism	rnc	GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363	3.1.26.3	ko:K03685	ko03008,ko05205,map03008,map05205	-	-	-	ko00000,ko00001,ko01000,ko03009,ko03019,ko03036	-	-	-	Ribonucleas_3_3,dsrm
SX1_k127_4782458_2	1297865.APJD01000020_gene20	4.101e-193	603.0	COG1159@1|root,COG1159@2|Bacteria,1MUKT@1224|Proteobacteria,2TSHM@28211|Alphaproteobacteria,3JUHR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism	era	-	-	ko:K03595	-	-	-	-	ko00000,ko03009,ko03029	-	-	-	KH_2,MMR_HSR1
SX1_k127_4782458_8	1297865.APJD01000020_gene21	6.213e-74	258.0	2A7JF@1|root,30WH8@2|Bacteria,1RE2C@1224|Proteobacteria,2UG2A@28211|Alphaproteobacteria,3K1CS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_36600	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4782458_5	1297865.APJD01000020_gene22	7.4e-161	507.0	COG1381@1|root,COG1381@2|Bacteria,1MVEJ@1224|Proteobacteria,2TTYW@28211|Alphaproteobacteria,3JVK5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Involved in DNA repair and RecF pathway recombination	recO	-	-	ko:K03584	ko03440,map03440	-	-	-	ko00000,ko00001,ko03400	-	-	-	RecO_C,RecO_N
SX1_k127_4782458_1	1230476.C207_04238	2.852e-224	695.0	COG0188@1|root,COG0188@2|Bacteria,1MURI@1224|Proteobacteria,2TQRQ@28211|Alphaproteobacteria,3JWK5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule	parC	-	-	ko:K02621	-	-	-	-	ko00000,ko01000,ko02048,ko03032,ko03036	-	-	-	DNA_gyraseA_C,DNA_topoisoIV
SX1_k127_4804186_26	1297865.APJD01000009_gene2990	8.023e-62	224.0	COG0476@1|root,COG0476@2|Bacteria,1QUMS@1224|Proteobacteria,2TT9V@28211|Alphaproteobacteria,3JX8K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	ThiF family	-	-	2.7.7.80	ko:K21029	ko04122,map04122	-	R07459	RC00043	ko00000,ko00001,ko01000	-	-	-	ThiF
SX1_k127_4804186_5	1297865.APJD01000009_gene2991	1.447e-227	706.0	2BZD3@1|root,2Z914@2|Bacteria,1R4D8@1224|Proteobacteria,2TTPQ@28211|Alphaproteobacteria,3JS4C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4804186_28	1297865.APJD01000036_gene1571	2.059e-51	183.0	COG4298@1|root,COG4298@2|Bacteria,1RIZJ@1224|Proteobacteria,2U97E@28211|Alphaproteobacteria,3JZPZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	yiaA/B two helix domain	MA20_06245	-	-	-	-	-	-	-	-	-	-	-	YiaAB
SX1_k127_4804186_15	1297865.APJD01000036_gene1570	1.522e-124	401.0	COG1842@1|root,COG1842@2|Bacteria,1R41V@1224|Proteobacteria,2U28E@28211|Alphaproteobacteria,3JWYW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KT	PspA/IM30 family	MA20_06250	-	-	-	-	-	-	-	-	-	-	-	PspA_IM30
SX1_k127_4804186_16	1297865.APJD01000036_gene1569	2.302e-120	387.0	COG1309@1|root,COG1309@2|Bacteria,1N0XU@1224|Proteobacteria,2U82V@28211|Alphaproteobacteria,3JRHE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	WHG domain	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N,WHG
SX1_k127_4804186_2	1297865.APJD01000036_gene1568	1.725e-262	809.0	COG1398@1|root,COG1398@2|Bacteria,1N2MA@1224|Proteobacteria,2TT62@28211|Alphaproteobacteria,3JSQG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Fatty acid desaturase	-	-	1.14.19.1	ko:K00507	ko01040,ko01212,ko03320,ko04152,ko04212,map01040,map01212,map03320,map04152,map04212	-	R02222	RC00917	ko00000,ko00001,ko01000,ko01004	-	-	-	FA_desaturase
SX1_k127_4804186_24	1297865.APJD01000036_gene1567	4.725e-74	257.0	COG1917@1|root,COG1917@2|Bacteria,1RD6M@1224|Proteobacteria,2U811@28211|Alphaproteobacteria,3JYUB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Cupin domain	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
SX1_k127_4804186_27	172088.AUGA01000005_gene7937	5.895e-59	207.0	2BVSM@1|root,2ZFM6@2|Bacteria,1RKNV@1224|Proteobacteria,2UAEZ@28211|Alphaproteobacteria,3JZPD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4804186_8	1297865.APJD01000036_gene1565	9.57e-176	554.0	COG0528@1|root,COG0528@2|Bacteria,1N1F1@1224|Proteobacteria,2U1KT@28211|Alphaproteobacteria,3JV10@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Amino acid kinase family	-	-	-	ko:K00947	-	-	-	-	ko00000	-	-	-	AA_kinase
SX1_k127_4804186_9	1297865.APJD01000036_gene1564	1.545e-167	531.0	COG0528@1|root,COG0528@2|Bacteria,1R19J@1224|Proteobacteria,2TR23@28211|Alphaproteobacteria,3JWKZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Amino acid kinase family	-	-	-	ko:K00947	-	-	-	-	ko00000	-	-	-	AA_kinase
SX1_k127_4804186_1	1297865.APJD01000036_gene1563	5.156e-269	836.0	COG0642@1|root,COG2205@2|Bacteria,1N1Z2@1224|Proteobacteria,2TRJU@28211|Alphaproteobacteria,3JTHA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
SX1_k127_4804186_13	1297865.APJD01000036_gene1562	2.081e-143	456.0	COG0745@1|root,COG0745@2|Bacteria,1N0YI@1224|Proteobacteria,2VEXA@28211|Alphaproteobacteria,3JUSM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Transcriptional regulatory protein, C terminal	-	-	-	ko:K07666	ko02020,ko02024,map02020,map02024	M00453	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
SX1_k127_4804186_10	1297865.APJD01000036_gene1561	7.008e-158	500.0	COG4705@1|root,COG4705@2|Bacteria,1MVMJ@1224|Proteobacteria,2TS5R@28211|Alphaproteobacteria,3JQW3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Repeat of Unknown Function (DUF347)	-	-	-	-	-	-	-	-	-	-	-	-	DUF347
SX1_k127_4804186_25	1230476.C207_04313	1.057e-66	231.0	COG4705@1|root,COG4705@2|Bacteria,1RFXY@1224|Proteobacteria,2U91K@28211|Alphaproteobacteria,3JYWY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Repeat of Unknown Function (DUF347)	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4804186_11	1297865.APJD01000036_gene1559	8.479e-156	497.0	COG4705@1|root,COG4705@2|Bacteria,1MVMJ@1224|Proteobacteria,2TS5R@28211|Alphaproteobacteria,3JQKX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Repeat of Unknown Function (DUF347)	-	-	-	-	-	-	-	-	-	-	-	-	DUF347
SX1_k127_4804186_0	1297865.APJD01000036_gene1558	0.0	1382.0	COG1018@1|root,COG3576@1|root,COG1018@2|Bacteria,COG3576@2|Bacteria,1MV41@1224|Proteobacteria,2TQXP@28211|Alphaproteobacteria,3JVF5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Oxidoreductase NAD-binding domain	-	-	-	ko:K02613,ko:K07006	ko00360,ko01120,map00360,map01120	-	R09838	RC02690	ko00000,ko00001	-	-	-	FAD_binding_6,Fer2,NAD_binding_1,Putative_PNPOx
SX1_k127_4804186_14	1297865.APJD01000036_gene1557	1.021e-127	410.0	COG0625@1|root,COG0625@2|Bacteria,1MWY4@1224|Proteobacteria,2VEUH@28211|Alphaproteobacteria,3JXDG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, N-terminal domain	gstA	GO:0003674,GO:0003824,GO:0004364,GO:0005488,GO:0005515,GO:0005575,GO:0006950,GO:0008150,GO:0009635,GO:0009636,GO:0016740,GO:0016765,GO:0032991,GO:0042221,GO:0042802,GO:0042803,GO:0046983,GO:0050896	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_2,GST_N,GST_N_3
SX1_k127_4804186_20	1297865.APJD01000036_gene1556	8.585e-91	298.0	COG2146@1|root,COG2146@2|Bacteria,1Q7R0@1224|Proteobacteria,2U5MW@28211|Alphaproteobacteria,3JY1F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rieske-like [2Fe-2S] domain	-	-	-	-	-	-	-	-	-	-	-	-	Rieske
SX1_k127_4804186_29	1038860.AXAP01000060_gene2284	4.475e-08	55.0	COG0135@1|root,COG0135@2|Bacteria,1RA87@1224|Proteobacteria,2U7CH@28211|Alphaproteobacteria,3JRQW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the TrpF family	trpF	-	5.3.1.24	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00023	R03509	RC00945	ko00000,ko00001,ko00002,ko01000	-	-	-	PRAI
SX1_k127_4804186_3	1297865.APJD01000036_gene1555	6.413e-261	803.0	COG2159@1|root,COG2159@2|Bacteria,1N0C7@1224|Proteobacteria,2TRXY@28211|Alphaproteobacteria,3JQNV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Amidohydrolase	-	-	-	ko:K07045	-	-	-	-	ko00000	-	-	-	Amidohydro_2
SX1_k127_4804186_4	1297865.APJD01000036_gene1554	2.346e-240	746.0	COG2159@1|root,COG2159@2|Bacteria,1MVTS@1224|Proteobacteria,2TU78@28211|Alphaproteobacteria,3JV4R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Amidohydrolase	-	-	-	ko:K07045	-	-	-	-	ko00000	-	-	-	Amidohydro_2
SX1_k127_4804186_22	1297865.APJD01000036_gene1553	3.789e-85	283.0	2B3D3@1|root,31W1V@2|Bacteria,1MYTY@1224|Proteobacteria,2U6J7@28211|Alphaproteobacteria,3JYFY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4804186_12	1297865.APJD01000036_gene1552	5.021e-150	475.0	COG0693@1|root,COG0693@2|Bacteria,1N8N6@1224|Proteobacteria,2TT0U@28211|Alphaproteobacteria,3JTZY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	DJ-1/PfpI family	-	-	4.2.1.103	ko:K18199	ko00930,map00930	-	R05771	RC01467	ko00000,ko00001,ko01000,ko01002	-	-	-	DJ-1_PfpI
SX1_k127_4804186_6	1230476.C207_04324	1.065e-201	633.0	COG4977@1|root,COG4977@2|Bacteria,1MUDK@1224|Proteobacteria,2TS7I@28211|Alphaproteobacteria,3JR98@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	DJ-1/PfpI family	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI,HTH_18
SX1_k127_4804186_21	1144319.PMI16_04645	1.319e-90	301.0	COG0110@1|root,COG0110@2|Bacteria,1RA2T@1224|Proteobacteria,2VR8A@28216|Betaproteobacteria,477IG@75682|Oxalobacteraceae	28216|Betaproteobacteria	S	Hexapeptide repeat of succinyl-transferase	-	-	2.3.1.79	ko:K00661	-	-	-	-	ko00000,ko01000	-	-	-	Hexapep,Hexapep_2
SX1_k127_4804186_18	1297865.APJD01000036_gene1550	1.038e-110	360.0	COG2128@1|root,COG2128@2|Bacteria,1R84B@1224|Proteobacteria,2U42G@28211|Alphaproteobacteria,3JX2Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	-	-	-	-	-	-	-	-	-	-	-	-	CMD
SX1_k127_4804186_7	1297865.APJD01000036_gene1549	8.737e-184	589.0	COG0583@1|root,COG0583@2|Bacteria,1MXRP@1224|Proteobacteria,2TV2C@28211|Alphaproteobacteria,3K62S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_4804186_17	1297865.APJD01000036_gene1548	1.141e-111	362.0	COG2059@1|root,COG2059@2|Bacteria,1RFMD@1224|Proteobacteria,2VG8D@28211|Alphaproteobacteria,3JX2N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Chromate transporter	-	-	-	ko:K07240	-	-	-	-	ko00000,ko02000	2.A.51.1	-	-	Chromate_transp
SX1_k127_4804186_19	1297865.APJD01000036_gene1547	4.985e-102	344.0	COG2059@1|root,COG2059@2|Bacteria,1RB6A@1224|Proteobacteria,2VG8C@28211|Alphaproteobacteria,3JW3N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Chromate transporter	-	-	-	ko:K07240	-	-	-	-	ko00000,ko02000	2.A.51.1	-	-	Chromate_transp
SX1_k127_4804186_23	1297865.APJD01000036_gene1546	1.833e-75	261.0	COG0782@1|root,COG0782@2|Bacteria,1MZNY@1224|Proteobacteria,2UC6B@28211|Alphaproteobacteria,3JZKG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Rnk N-terminus	greA2	-	-	ko:K06140	-	-	-	-	ko00000,ko03000	-	-	-	GreA_GreB,Rnk_N
SX1_k127_4804186_31	1038867.AXAY01000026_gene1381	0.0001485	45.0	COG0587@1|root,COG0587@2|Bacteria,1MUE4@1224|Proteobacteria,2TRUB@28211|Alphaproteobacteria,3JUU5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase	dnaE2	GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496	2.7.7.7	ko:K02337,ko:K14162	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_alpha,HHH_6,PHP,tRNA_anti-codon
SX1_k127_4807507_0	1297865.APJD01000006_gene4476	6.499e-311	954.0	COG5373@1|root,COG5373@2|Bacteria,1N08V@1224|Proteobacteria,2TWNB@28211|Alphaproteobacteria,3JUIZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Predicted membrane protein (DUF2339)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2339
SX1_k127_4807507_4	1297865.APJD01000006_gene4475	3.835e-45	165.0	2AB78@1|root,310MM@2|Bacteria,1MZU7@1224|Proteobacteria,2UCNS@28211|Alphaproteobacteria,3K05P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4807507_3	1297865.APJD01000006_gene4474	3.882e-110	357.0	2F6Z6@1|root,33ZF5@2|Bacteria,1MV4Y@1224|Proteobacteria,2TT12@28211|Alphaproteobacteria,3JTHQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_42170	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4807507_2	1297865.APJD01000006_gene4473	1.37e-211	658.0	COG0604@1|root,COG0604@2|Bacteria,1MV3W@1224|Proteobacteria,2TRW7@28211|Alphaproteobacteria,3JQQ4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Zinc-binding dehydrogenase	MA20_42175	-	-	ko:K19745	ko00640,ko01100,map00640,map01100	-	R00919	RC00095	ko00000,ko00001,ko01000	-	-	-	ADH_N,ADH_zinc_N
SX1_k127_4807507_1	1297865.APJD01000006_gene4472	3.282e-264	815.0	COG0477@1|root,COG2814@2|Bacteria,1MVHG@1224|Proteobacteria,2TRA4@28211|Alphaproteobacteria,3JSPN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	MA20_42180	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_4811280_4	1297865.APJD01000005_gene3952	2.124e-112	364.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TQKE@28211|Alphaproteobacteria,3JRFI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_4811280_2	1297865.APJD01000005_gene3953	7.55e-169	543.0	COG2186@1|root,COG2186@2|Bacteria,1QCHK@1224|Proteobacteria,2U9QK@28211|Alphaproteobacteria,3JR8C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Transcriptional regulator	-	-	-	ko:K05799	-	-	-	-	ko00000,ko03000	-	-	-	FCD,GntR
SX1_k127_4811280_3	398525.KB900701_gene4180	1.075e-167	528.0	COG1024@1|root,COG1024@2|Bacteria,1Q51H@1224|Proteobacteria,2TUPH@28211|Alphaproteobacteria,3JRRW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	-	-	4.2.1.17	ko:K01692	ko00071,ko00280,ko00281,ko00310,ko00360,ko00362,ko00380,ko00410,ko00627,ko00640,ko00650,ko00903,ko00930,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00310,map00360,map00362,map00380,map00410,map00627,map00640,map00650,map00903,map00930,map01100,map01110,map01120,map01130,map01212	M00032,M00087	R03026,R03045,R04137,R04170,R04204,R04224,R04738,R04740,R04744,R04746,R04749,R05595,R06411,R06412,R06942,R08093	RC00831,RC00834,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
SX1_k127_4811280_0	1297865.APJD01000005_gene3955	0.0	1497.0	COG1960@1|root,COG1960@2|Bacteria,1R6EH@1224|Proteobacteria,2U2J9@28211|Alphaproteobacteria,3JW67@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, middle domain	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_4811280_1	1297865.APJD01000005_gene3956	3.511e-259	799.0	COG1804@1|root,COG1804@2|Bacteria,1MU2K@1224|Proteobacteria,2TRB6@28211|Alphaproteobacteria,3JU7I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA-transferase family III	-	-	-	-	-	-	-	-	-	-	-	-	CoA_transf_3
SX1_k127_4811280_5	1297865.APJD01000005_gene3957	1.807e-98	322.0	COG1846@1|root,COG1846@2|Bacteria,1R4QV@1224|Proteobacteria,2U0C8@28211|Alphaproteobacteria,3JVAU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	ko:K22296	-	-	-	-	ko00000,ko03000	-	-	-	MarR,MarR_2
SX1_k127_4811759_0	1297865.APJD01000033_gene6940	1.23e-278	869.0	COG0161@1|root,COG0161@2|Bacteria,1MU2N@1224|Proteobacteria,2TQND@28211|Alphaproteobacteria,3JR83@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	bioA	-	2.6.1.62	ko:K00833	ko00780,ko01100,map00780,map01100	M00123,M00573,M00577	R03231	RC00006,RC00887	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3
SX1_k127_4811759_3	172088.AUGA01000006_gene8040	6.564e-111	365.0	COG0132@1|root,COG0132@2|Bacteria,1RDRK@1224|Proteobacteria,2U5AJ@28211|Alphaproteobacteria,3JW8X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring	bioD	GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.1.1.197,6.3.3.3	ko:K01935,ko:K02169	ko00780,ko01100,map00780,map01100	M00123,M00572,M00573,M00577	R03182,R09543	RC00003,RC00460,RC00868	ko00000,ko00001,ko00002,ko01000	-	-	-	AAA_26
SX1_k127_4811759_1	1297865.APJD01000033_gene6942	3.59e-249	769.0	COG0156@1|root,COG0156@2|Bacteria,1MVVH@1224|Proteobacteria,2TTAK@28211|Alphaproteobacteria,3JRMK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Aminotransferase class I and II	bioF	-	2.3.1.47	ko:K00652	ko00780,ko01100,map00780,map01100	M00123,M00573,M00577	R03210,R10124	RC00004,RC00039,RC02725	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_1_2
SX1_k127_4811759_2	1297865.APJD01000033_gene6943	4.203e-205	638.0	COG0502@1|root,COG0502@2|Bacteria,1MVFF@1224|Proteobacteria,2TSD6@28211|Alphaproteobacteria,3JQNU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism	bioB	-	2.8.1.6	ko:K01012	ko00780,ko01100,map00780,map01100	M00123,M00573,M00577	R01078	RC00441	ko00000,ko00001,ko00002,ko01000	-	-	-	BATS,Radical_SAM
SX1_k127_4812654_8	1297865.APJD01000006_gene4720	2.699e-142	451.0	COG4993@1|root,COG4993@2|Bacteria,1MUQX@1224|Proteobacteria,2TS2Q@28211|Alphaproteobacteria,3JRZ3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	PQQ-like domain	exaA	-	1.1.2.8,1.1.5.11	ko:K00114,ko:K20937	ko00010,ko00625,ko01100,ko01110,ko01120,ko01130,map00010,map00625,map01100,map01110,map01120,map01130	-	R05062,R05198,R05285	RC00087,RC00088,RC01039	ko00000,ko00001,ko01000	-	-	-	PQQ,PQQ_2
SX1_k127_4812654_17	1297865.APJD01000006_gene4719	3.446e-62	219.0	COG2010@1|root,COG2010@2|Bacteria,1RDPD@1224|Proteobacteria,2U7T0@28211|Alphaproteobacteria,3JYPY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome C oxidase, cbb3-type, subunit III	MA20_34410	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3
SX1_k127_4812654_5	1297865.APJD01000006_gene4718	4.441e-191	604.0	COG0834@1|root,COG0834@2|Bacteria,1MXX4@1224|Proteobacteria,2TVII@28211|Alphaproteobacteria,3JRYV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	ET	Bacterial extracellular solute-binding proteins, family 3	-	-	-	-	-	-	-	-	-	-	-	-	SBP_bac_3
SX1_k127_4812654_6	1297865.APJD01000006_gene4717	4.516e-166	536.0	COG1344@1|root,COG1344@2|Bacteria,1NSHZ@1224|Proteobacteria,2TRS6@28211|Alphaproteobacteria,3JSRC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella	flgL	-	-	ko:K02397	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flagellin_C,Flagellin_N
SX1_k127_4812654_2	1297865.APJD01000006_gene4716	3.68e-321	989.0	COG1256@1|root,COG1256@2|Bacteria,1MV2M@1224|Proteobacteria,2TV1B@28211|Alphaproteobacteria,3JVDY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	flagellar hook-associated protein	flgK	-	-	ko:K02396	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flagellin_IN,Flg_bb_rod,Flg_bbr_C
SX1_k127_4812654_15	1297865.APJD01000006_gene4715	4.468e-86	287.0	2EJWZ@1|root,33DMP@2|Bacteria,1RA8N@1224|Proteobacteria,2U6GF@28211|Alphaproteobacteria,3JY6Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4812654_19	1297865.APJD01000006_gene4714	1.09e-38	163.0	2ABZZ@1|root,311HN@2|Bacteria,1N1UA@1224|Proteobacteria,2UCK9@28211|Alphaproteobacteria,3K0HN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4812654_12	1297865.APJD01000006_gene4713	1.48e-112	367.0	COG1749@1|root,COG1749@2|Bacteria,1MU5J@1224|Proteobacteria,2TSF2@28211|Alphaproteobacteria,3JSD6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Flagellar basal body protein FlaE	flgE	-	-	ko:K02390	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FlaE,Flg_bb_rod,Flg_bbr_C
SX1_k127_4812654_11	1297865.APJD01000006_gene4713	9.331e-127	424.0	COG1749@1|root,COG1749@2|Bacteria,1MU5J@1224|Proteobacteria,2TSF2@28211|Alphaproteobacteria,3JSD6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Flagellar basal body protein FlaE	flgE	-	-	ko:K02390	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FlaE,Flg_bb_rod,Flg_bbr_C
SX1_k127_4812654_13	1297865.APJD01000006_gene4712	6.41e-109	357.0	COG1843@1|root,COG1843@2|Bacteria,1MXCG@1224|Proteobacteria,2UCHH@28211|Alphaproteobacteria,3JVP9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Required for flagellar hook formation. May act as a scaffolding protein	flgD	-	-	ko:K02389	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FLgD_tudor,FlgD,FlgD_ig
SX1_k127_4812654_16	1297865.APJD01000006_gene4711	1.428e-73	250.0	2EPJT@1|root,33H6D@2|Bacteria,1MZYQ@1224|Proteobacteria,2UBU1@28211|Alphaproteobacteria,3K0EM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4812654_14	1297865.APJD01000006_gene4710	2.09e-91	301.0	COG1516@1|root,COG1516@2|Bacteria,1RB93@1224|Proteobacteria,2U6X5@28211|Alphaproteobacteria,3JY79@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Flagellar protein FliS	fliS	-	-	ko:K02422	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FliS
SX1_k127_4812654_3	1297865.APJD01000006_gene4709	7.803e-306	944.0	COG1345@1|root,COG1345@2|Bacteria,1MUVP@1224|Proteobacteria,2TQNV@28211|Alphaproteobacteria,3JWTU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end	fliD	-	-	ko:K02407	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flagellin_IN,FliD_C,FliD_N
SX1_k127_4812654_9	1297865.APJD01000006_gene4707	4.617e-142	456.0	COG1344@1|root,COG1344@2|Bacteria,1MV1N@1224|Proteobacteria,2TT8X@28211|Alphaproteobacteria,3JVFK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella	-	-	-	ko:K02406	ko02020,ko02040,ko04621,ko04626,ko05132,ko05134,map02020,map02040,map04621,map04626,map05132,map05134	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flagellin_C,Flagellin_N
SX1_k127_4812654_10	1297865.APJD01000006_gene4706	6.853e-139	443.0	COG1595@1|root,COG1595@2|Bacteria,1MX7T@1224|Proteobacteria,2U5A1@28211|Alphaproteobacteria,3JSQ9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Sigma-70, region 4	sigW	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
SX1_k127_4812654_1	1297865.APJD01000006_gene4705	0.0	1510.0	COG5610@1|root,COG5610@2|Bacteria,1Q4T5@1224|Proteobacteria,2U1E1@28211|Alphaproteobacteria,3JWHF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	HAD_2,Hydrolase_like
SX1_k127_4812654_4	1297865.APJD01000006_gene4704	2.738e-266	823.0	2ECBC@1|root,3369Q@2|Bacteria,1QWJC@1224|Proteobacteria,2TWZC@28211|Alphaproteobacteria,3K6Q6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4812654_7	1297865.APJD01000006_gene4703	5.007e-153	484.0	COG0223@1|root,COG0223@2|Bacteria,1R6XR@1224|Proteobacteria,2TTKX@28211|Alphaproteobacteria,3JUUZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus	-	-	-	-	-	-	-	-	-	-	-	-	Formyl_trans_N
SX1_k127_4812654_0	1297865.APJD01000006_gene4702	0.0	1919.0	COG2114@1|root,COG3899@1|root,COG3903@1|root,COG2114@2|Bacteria,COG3899@2|Bacteria,COG3903@2|Bacteria,1MUDT@1224|Proteobacteria,2TQVN@28211|Alphaproteobacteria,3JTQ7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylate and Guanylate cyclase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	AAA_16,Guanylate_cyc,TPR_12,TPR_4
SX1_k127_4812654_18	1230476.C207_04809	2.345e-50	179.0	2A68Q@1|root,30V1B@2|Bacteria,1R6U2@1224|Proteobacteria,2U164@28211|Alphaproteobacteria,3JXKK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4814939_3	1297865.APJD01000036_gene1433	1.063e-122	397.0	COG2070@1|root,COG2070@2|Bacteria,1MU0U@1224|Proteobacteria,2TS5U@28211|Alphaproteobacteria,3JUQ7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Nitronate monooxygenase	MA20_20575	-	1.13.12.16	ko:K00459	ko00910,map00910	-	R00025	RC02541,RC02759	ko00000,ko00001,ko01000	-	-	-	NMO
SX1_k127_4814939_1	1297865.APJD01000036_gene1434	7.648e-187	585.0	COG0583@1|root,COG0583@2|Bacteria,1MWVB@1224|Proteobacteria,2TTFG@28211|Alphaproteobacteria,3JUFU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_4814939_5	1040989.AWZU01000015_gene2614	0.0003688	44.0	COG1287@1|root,COG1287@2|Bacteria,1N1IK@1224|Proteobacteria,2TUYH@28211|Alphaproteobacteria,3JSAB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	oligosaccharyl transferase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4814939_0	1297865.APJD01000036_gene1435	0.0	1058.0	COG5309@1|root,COG5309@2|Bacteria,1MWJJ@1224|Proteobacteria,2U19Q@28211|Alphaproteobacteria,3JVH2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	beta (1-6) glucans synthase	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_17
SX1_k127_4814939_2	1297865.APJD01000036_gene1436	9.176e-138	443.0	COG0122@1|root,COG0122@2|Bacteria,1MX9C@1224|Proteobacteria,2TVJ7@28211|Alphaproteobacteria,3JU5E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	endonuclease III	alkA	-	3.2.2.21	ko:K01247	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	HhH-GPD
SX1_k127_4814939_4	1297865.APJD01000036_gene1437	2.122e-30	120.0	COG3541@1|root,COG3541@2|Bacteria,1MYFT@1224|Proteobacteria,2U7ZX@28211|Alphaproteobacteria,3JX7G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Predicted nucleotidyltransferase	-	-	-	ko:K07074	-	-	-	-	ko00000	-	-	-	Nuc-transf
SX1_k127_4816073_5	1297865.APJD01000007_gene2080	1.13e-164	519.0	COG0251@1|root,COG0251@2|Bacteria,1N1B6@1224|Proteobacteria,2TZWE@28211|Alphaproteobacteria,3JRZG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	oxidation-reduction process	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4816073_0	1297865.APJD01000007_gene2081	0.0	1065.0	COG1231@1|root,COG1231@2|Bacteria,1MWPH@1224|Proteobacteria,2U05G@28211|Alphaproteobacteria,3JW1P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Flavin containing amine oxidoreductase	-	-	1.4.3.4	ko:K00274	ko00260,ko00330,ko00340,ko00350,ko00360,ko00380,ko00950,ko00982,ko01100,ko01110,ko04726,ko04728,ko05030,ko05031,ko05034,map00260,map00330,map00340,map00350,map00360,map00380,map00950,map00982,map01100,map01110,map04726,map04728,map05030,map05031,map05034	M00135	R02173,R02382,R02529,R02532,R02613,R02908,R02919,R04025,R04300,R04674,R04890,R04893,R04894,R04907,R04908,R08346,R08347,R08348,R11354	RC00062,RC00160,RC00225,RC00676,RC00807,RC00808,RC01808,RC02226,RC02713	ko00000,ko00001,ko00002,ko01000	-	-	-	Amino_oxidase
SX1_k127_4816073_11	1297865.APJD01000007_gene2082	1.343e-77	263.0	COG2010@1|root,COG2010@2|Bacteria,1N8E1@1224|Proteobacteria,2UG6N@28211|Alphaproteobacteria,3JZCS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome C oxidase, cbb3-type, subunit III	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrome_CBB3
SX1_k127_4816073_1	1297865.APJD01000007_gene2083	1.243e-300	934.0	COG0624@1|root,COG0624@2|Bacteria,1MWJS@1224|Proteobacteria,2TUHT@28211|Alphaproteobacteria,3JTSY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Peptidase family M20/M25/M40	-	-	-	-	-	-	-	-	-	-	-	-	M20_dimer,Peptidase_M20,Peptidase_M28
SX1_k127_4816073_7	1297865.APJD01000007_gene2084	1.336e-157	500.0	COG1712@1|root,COG1712@2|Bacteria,1MX8S@1224|Proteobacteria,2TV48@28211|Alphaproteobacteria,3JSWD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate	nadX	-	1.4.1.21	ko:K06989	ko00760,ko01100,map00760,map01100	-	R07407,R07410	RC02566	ko00000,ko00001,ko01000	-	-	-	DUF108,NAD_binding_3
SX1_k127_4816073_9	1297865.APJD01000007_gene2085	2.288e-130	419.0	COG1335@1|root,COG1335@2|Bacteria,1MUGW@1224|Proteobacteria,2TRMB@28211|Alphaproteobacteria,3JSHT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Isochorismatase family	pncA	-	3.5.1.19	ko:K08281	ko00760,ko01100,map00760,map01100	-	R01268	RC00100	ko00000,ko00001,ko01000	-	-	-	Isochorismatase
SX1_k127_4816073_4	1297865.APJD01000007_gene2086	1.203e-194	609.0	COG0181@1|root,COG0181@2|Bacteria,1MU56@1224|Proteobacteria,2TS3D@28211|Alphaproteobacteria,3JSBV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps	hemC	-	2.5.1.61	ko:K01749	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R00084	RC02317	ko00000,ko00001,ko00002,ko01000	-	-	-	Porphobil_deam,Porphobil_deamC
SX1_k127_4816073_6	1297865.APJD01000007_gene2087	9.421e-160	522.0	COG1024@1|root,COG1024@2|Bacteria,1NDT7@1224|Proteobacteria,2U2R9@28211|Alphaproteobacteria,3JWXD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	-	-	4.2.1.17	ko:K01692	ko00071,ko00280,ko00281,ko00310,ko00360,ko00362,ko00380,ko00410,ko00627,ko00640,ko00650,ko00903,ko00930,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00310,map00360,map00362,map00380,map00410,map00627,map00640,map00650,map00903,map00930,map01100,map01110,map01120,map01130,map01212	M00032,M00087	R03026,R03045,R04137,R04170,R04204,R04224,R04738,R04740,R04744,R04746,R04749,R05595,R06411,R06412,R06942,R08093	RC00831,RC00834,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
SX1_k127_4816073_2	1297865.APJD01000007_gene2088	2.804e-247	765.0	COG4638@1|root,COG4638@2|Bacteria,1MWXW@1224|Proteobacteria,2TVNW@28211|Alphaproteobacteria,3JX9Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Ring hydroxylating alpha subunit (catalytic domain)	-	-	-	-	-	-	-	-	-	-	-	-	Rieske,Ring_hydroxyl_A
SX1_k127_4816073_3	1297865.APJD01000007_gene2089	9.969e-197	614.0	COG0583@1|root,COG0583@2|Bacteria,1R7A5@1224|Proteobacteria,2U4VM@28211|Alphaproteobacteria,3JXHJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_4816073_8	1297865.APJD01000007_gene2090	2.342e-147	471.0	COG3709@1|root,COG3709@2|Bacteria,1RK3Z@1224|Proteobacteria,2U616@28211|Alphaproteobacteria,3JRP2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Protein of unknown function (DUF1045)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1045
SX1_k127_4816073_10	1297865.APJD01000007_gene2091	2.111e-84	280.0	COG3454@1|root,COG3454@2|Bacteria,1MXDS@1224|Proteobacteria,2TQU0@28211|Alphaproteobacteria,3JS90@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Phosphonate metabolism	MA20_21505	-	3.6.1.63	ko:K06162	ko00440,map00440	-	R10186	RC00002	ko00000,ko00001,ko01000	-	-	-	Amidohydro_1,Amidohydro_3
SX1_k127_4816192_2	1297865.APJD01000007_gene1971	1.507e-80	268.0	COG1807@1|root,COG1807@2|Bacteria,1QA8B@1224|Proteobacteria,2TY1E@28211|Alphaproteobacteria,3JSHV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Dolichyl-phosphate-mannose-protein mannosyltransferase	MA20_42315	-	-	-	-	-	-	-	-	-	-	-	PMT_2
SX1_k127_4816192_1	1297865.APJD01000007_gene1972	2.604e-166	524.0	COG1573@1|root,COG1573@2|Bacteria,1MWX1@1224|Proteobacteria,2TT4Q@28211|Alphaproteobacteria,3JU3F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	UreE urease accessory protein, C-terminal domain	udgA	-	3.2.2.27	ko:K21929	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	UDG
SX1_k127_4816192_0	1297865.APJD01000007_gene1973	0.0	1150.0	COG0644@1|root,COG2440@1|root,COG0644@2|Bacteria,COG2440@2|Bacteria,1MVU6@1224|Proteobacteria,2TS0R@28211|Alphaproteobacteria,3JTT9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	electron transfer	etf	GO:0003674,GO:0003824,GO:0004174,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016645,GO:0016649,GO:0016722,GO:0017133,GO:0019866,GO:0022900,GO:0022904,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032592,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043783,GO:0044237,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045251,GO:0045333,GO:0048037,GO:0048038,GO:0048039,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070013,GO:0098573,GO:0098798,GO:1902494,GO:1990204	1.5.5.1	ko:K00311	-	-	-	-	ko00000,ko01000	-	-	-	ETF_QO,FAD_binding_2,NAD_binding_8,Thi4
SX1_k127_4822550_0	883080.HMPREF9697_02680	4.713e-234	734.0	COG0072@1|root,COG0073@1|root,COG0072@2|Bacteria,COG0073@2|Bacteria,1MWKS@1224|Proteobacteria,2TQV8@28211|Alphaproteobacteria,3JUGP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily	pheT	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494	6.1.1.20	ko:K01890	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	B3_4,B5,FDX-ACB,tRNA_bind
SX1_k127_4822550_1	1245469.S58_01530	6.978e-176	552.0	COG0016@1|root,COG0016@2|Bacteria,1MVD7@1224|Proteobacteria,2TS2T@28211|Alphaproteobacteria,3JTB6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily	pheS	GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.20	ko:K01889	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Phe_tRNA-synt_N,tRNA-synt_2d
SX1_k127_4837025_2	1297865.APJD01000036_gene1479	1.99e-281	865.0	COG0457@1|root,COG4249@1|root,COG0457@2|Bacteria,COG4249@2|Bacteria,1MXFD@1224|Proteobacteria,2TRW5@28211|Alphaproteobacteria,3JR0X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14,Sel1,TPR_1,TPR_11,TPR_16,TPR_2,TPR_8
SX1_k127_4837025_6	1297865.APJD01000036_gene1478	9.457e-153	486.0	COG0666@1|root,COG0666@2|Bacteria	2|Bacteria	G	response to abiotic stimulus	-	-	-	ko:K06867	-	-	-	-	ko00000	-	-	-	Ank,Ank_2,Ank_4
SX1_k127_4837025_0	1297865.APJD01000036_gene1477	0.0	2035.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JXQU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	MMPL family	-	-	-	ko:K07789	ko02020,map02020	M00648	-	-	ko00000,ko00001,ko00002,ko02000	2.A.6.2	-	-	ACR_tran
SX1_k127_4837025_1	1297865.APJD01000036_gene1476	5.474e-321	987.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,3JSXN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde dehydrogenase family	-	-	1.2.1.3	ko:K00128	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	M00135	R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
SX1_k127_4837025_3	1297865.APJD01000036_gene1475	6.191e-237	736.0	COG0477@1|root,COG2814@2|Bacteria,1MVD0@1224|Proteobacteria,2TTBC@28211|Alphaproteobacteria,3JU1X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_4837025_4	1297865.APJD01000036_gene1474	3.108e-194	606.0	COG0583@1|root,COG0583@2|Bacteria,1MU2E@1224|Proteobacteria,2TUNU@28211|Alphaproteobacteria,3JUG2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_4837025_5	1297865.APJD01000036_gene1473	2.222e-188	590.0	COG1055@1|root,COG1055@2|Bacteria,1MUX4@1224|Proteobacteria,2TV05@28211|Alphaproteobacteria,3JS1B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Arsenical pump membrane protein	arsB	-	-	ko:K03893	-	-	-	-	ko00000,ko02000	2.A.45.1,3.A.4.1	-	-	ArsB,CitMHS
SX1_k127_4839963_1	1230476.C207_01344	7.681e-68	235.0	COG1225@1|root,COG1225@2|Bacteria,1RD4R@1224|Proteobacteria,2U6Z9@28211|Alphaproteobacteria,3JTEU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Redoxin	bcp	-	1.11.1.15	ko:K03564	-	-	-	-	ko00000,ko01000	-	-	-	AhpC-TSA
SX1_k127_4839963_0	1297865.APJD01000001_gene5961	0.0	2339.0	COG3164@1|root,COG3164@2|Bacteria,1MVDY@1224|Proteobacteria,2TSGG@28211|Alphaproteobacteria,3JTCH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function	MA20_30770	-	-	-	-	-	-	-	-	-	-	-	AsmA_2,DUF3971
SX1_k127_4841042_1	1297865.APJD01000019_gene3096	2.147e-319	981.0	COG2821@1|root,COG2821@2|Bacteria,1MXD4@1224|Proteobacteria,2TS5S@28211|Alphaproteobacteria,3JTB1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	MltA specific insert domain	mltA	-	-	ko:K08304	-	-	-	-	ko00000,ko01000,ko01011	-	GH102	-	3D,MltA
SX1_k127_4841042_7	1297865.APJD01000019_gene3097	3.106e-144	458.0	COG4395@1|root,COG4395@2|Bacteria,1NCIX@1224|Proteobacteria,2TTDQ@28211|Alphaproteobacteria,3JRPF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tim44	MA20_24770	-	-	-	-	-	-	-	-	-	-	-	Tim44
SX1_k127_4841042_11	1297865.APJD01000019_gene3098	6.177e-99	324.0	COG1952@1|root,COG1952@2|Bacteria,1RI75@1224|Proteobacteria,2UBTB@28211|Alphaproteobacteria,3JVEB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA	secB	GO:0002790,GO:0006457,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705	-	ko:K03071	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044,ko03110	3.A.5	-	-	SecB
SX1_k127_4841042_6	1297865.APJD01000019_gene3099	2.502e-150	487.0	COG0847@1|root,COG0847@2|Bacteria,1MV8Z@1224|Proteobacteria,2TTFF@28211|Alphaproteobacteria,3JR18@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease	dnaQ	-	2.7.7.7	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	RNase_T
SX1_k127_4841042_10	1297865.APJD01000019_gene3100	5.212e-118	381.0	COG0237@1|root,COG0237@2|Bacteria,1RCXT@1224|Proteobacteria,2U765@28211|Alphaproteobacteria,3JQTC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A	coaE	GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.7.1.24	ko:K00859	ko00770,ko01100,map00770,map01100	M00120	R00130	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	CoaE
SX1_k127_4841042_9	1297865.APJD01000019_gene3101	8.089e-122	392.0	COG0424@1|root,COG0424@2|Bacteria,1RDA9@1224|Proteobacteria,2U9H5@28211|Alphaproteobacteria,3JUS3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Maf-like protein	maf	-	-	ko:K06287	-	-	-	-	ko00000	-	-	-	Maf
SX1_k127_4841042_5	1297865.APJD01000019_gene3102	1.405e-175	551.0	COG1806@1|root,COG1806@2|Bacteria,1MUHU@1224|Proteobacteria,2TT66@28211|Alphaproteobacteria,3JUGI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation	MA20_24795	-	2.7.11.33,2.7.4.28	ko:K09773	-	-	-	-	ko00000,ko01000	-	-	-	Kinase-PPPase
SX1_k127_4841042_12	1297865.APJD01000019_gene3103	6.132e-87	289.0	COG1981@1|root,COG1981@2|Bacteria,1RHGS@1224|Proteobacteria,2U987@28211|Alphaproteobacteria,3JY1X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterised protein family (UPF0093)	MA20_24805	-	-	ko:K08973	-	-	-	-	ko00000	-	-	-	UPF0093
SX1_k127_4841042_2	172088.AUGA01000016_gene2497	1.482e-271	839.0	COG1158@1|root,COG1158@2|Bacteria,1MUCF@1224|Proteobacteria,2TRB4@28211|Alphaproteobacteria,3JQY5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template	rho	-	-	ko:K03628	ko03018,map03018	-	-	-	ko00000,ko00001,ko03019,ko03021	-	-	-	ATP-synt_ab,Rho_N,Rho_RNA_bind
SX1_k127_4841042_3	1297865.APJD01000019_gene3105	6.577e-254	786.0	COG0486@1|root,COG0486@2|Bacteria,1MUCQ@1224|Proteobacteria,2TQZW@28211|Alphaproteobacteria,3JV1K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34	mnmE	-	-	ko:K03650	-	-	R08701	RC00053,RC00209,RC00870	ko00000,ko01000,ko03016	-	-	-	MMR_HSR1,MnmE_helical,TrmE_N
SX1_k127_4841042_0	1230476.C207_04013	0.0	1191.0	COG0445@1|root,COG0445@2|Bacteria,1MU6F@1224|Proteobacteria,2TRJS@28211|Alphaproteobacteria,3JTAX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34	gidA	GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363	-	ko:K03495	-	-	R08701	RC00053,RC00209,RC00870	ko00000,ko03016,ko03036	-	-	-	GIDA,GIDA_assoc
SX1_k127_4841042_8	172088.AUGA01000016_gene2493	3.765e-126	406.0	COG0357@1|root,COG0357@2|Bacteria,1MY0K@1224|Proteobacteria,2U9T9@28211|Alphaproteobacteria,3JQQP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Specifically methylates the N7 position of guanine in position 527 of 16S rRNA	rsmG	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.170	ko:K03501	-	-	-	-	ko00000,ko01000,ko03009,ko03036	-	-	-	GidB
SX1_k127_4841042_4	1297865.APJD01000019_gene3107	9.797e-180	565.0	COG1192@1|root,COG1192@2|Bacteria,1MV43@1224|Proteobacteria,2TSWH@28211|Alphaproteobacteria,3JRXN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Cellulose biosynthesis protein BcsQ	parA	-	-	ko:K03496	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	AAA_31
SX1_k127_4841042_13	1297865.APJD01000019_gene3108	5.279e-67	230.0	COG1475@1|root,COG1475@2|Bacteria,1MW2E@1224|Proteobacteria,2TSTN@28211|Alphaproteobacteria,3JTGY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Belongs to the ParB family	parB	-	-	ko:K03497	-	-	-	-	ko00000,ko03000,ko03036,ko04812	-	-	-	ParBc
SX1_k127_4843156_1	1297865.APJD01000014_gene630	1.777e-223	694.0	COG0318@1|root,COG0318@2|Bacteria,1R3S7@1224|Proteobacteria,2TQPW@28211|Alphaproteobacteria,3JTXP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	MA20_06645	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_4843156_6	1297865.APJD01000014_gene631	6.548e-38	147.0	COG0236@1|root,COG0236@2|Bacteria,1MZUU@1224|Proteobacteria,2U9S0@28211|Alphaproteobacteria,3K021@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Phosphopantetheine attachment site	MA20_06650	-	-	-	-	-	-	-	-	-	-	-	PP-binding
SX1_k127_4843156_3	1297865.APJD01000014_gene632	3.886e-196	619.0	2ECS2@1|root,336PQ@2|Bacteria,1NN0C@1224|Proteobacteria,2TVR8@28211|Alphaproteobacteria,3JUA9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Evidence 4 Homologs of previously reported genes of	MA20_23125	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4843156_0	1297865.APJD01000014_gene633	0.0	1229.0	COG0318@1|root,COG0318@2|Bacteria,1MWSD@1224|Proteobacteria,2TU6Y@28211|Alphaproteobacteria,3JRS1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme	-	-	-	ko:K00666	-	-	-	-	ko00000,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_4843156_2	1297865.APJD01000014_gene634	1.876e-205	643.0	COG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2TQWK@28211|Alphaproteobacteria,3JSAK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter family receptor	-	-	-	-	-	-	-	-	-	-	-	-	TctC
SX1_k127_4843156_4	1297865.APJD01000014_gene635	6.287e-166	524.0	COG1028@1|root,COG1028@2|Bacteria,1P9R4@1224|Proteobacteria,2TUAM@28211|Alphaproteobacteria,3K6BW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_4843156_5	172088.AUGA01000003_gene5553	1.818e-48	175.0	29F7S@1|root,3025F@2|Bacteria,1NBFS@1224|Proteobacteria,2UISV@28211|Alphaproteobacteria,3K16J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4847831_4	1297865.APJD01000006_gene4735	7.005e-47	169.0	2AFJV@1|root,315KR@2|Bacteria,1NDYV@1224|Proteobacteria,2UHDK@28211|Alphaproteobacteria,3K119@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Copper binding periplasmic protein CusF	-	-	-	-	-	-	-	-	-	-	-	-	CusF_Ec
SX1_k127_4847831_2	1297865.APJD01000006_gene4734	4.433e-120	391.0	COG0607@1|root,COG0607@2|Bacteria,1MZG3@1224|Proteobacteria,2U1W0@28211|Alphaproteobacteria,3JVWG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	COG0607 Rhodanese-related sulfurtransferase	-	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
SX1_k127_4847831_0	1297865.APJD01000006_gene4733	1.137e-194	607.0	COG0834@1|root,COG0834@2|Bacteria,1MWWZ@1224|Proteobacteria,2TU2F@28211|Alphaproteobacteria,3JQVZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	ET	Bacterial periplasmic substrate-binding proteins	MA20_34480	-	-	-	-	-	-	-	-	-	-	-	SBP_bac_3
SX1_k127_4847831_1	1230476.C207_04781	8.365e-186	582.0	COG0491@1|root,COG0491@2|Bacteria,1MX4H@1224|Proteobacteria,2TR8F@28211|Alphaproteobacteria,3JQMH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
SX1_k127_4847831_3	1297865.APJD01000006_gene4731	4.699e-61	211.0	COG5501@1|root,COG5501@2|Bacteria,1PB0I@1224|Proteobacteria,2TR7M@28211|Alphaproteobacteria,3JVW1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sulfur oxidation protein SoxY	MA20_34470	-	-	ko:K17226	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	-	-	-	SoxY,SoxZ
SX1_k127_4848634_2	1297865.APJD01000035_gene5449	1.808e-231	716.0	COG1073@1|root,COG1073@2|Bacteria,1MY4W@1224|Proteobacteria,2TVN5@28211|Alphaproteobacteria,3JVJS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	alpha beta	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4848634_1	1297865.APJD01000035_gene5450	1.526e-283	872.0	2DBC5@1|root,2Z8BV@2|Bacteria,1QVGS@1224|Proteobacteria,2TS2Y@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Uncharacterized protein conserved in bacteria (DUF2236)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2236
SX1_k127_4848634_7	1297865.APJD01000035_gene5451	6.006e-131	419.0	COG1309@1|root,COG1309@2|Bacteria,1NDME@1224|Proteobacteria,2U6XJ@28211|Alphaproteobacteria,3K296@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Domain of unknown function (DUF1956)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1956,TetR_N
SX1_k127_4848634_9	1297865.APJD01000035_gene5452	3.081e-78	267.0	COG3304@1|root,COG3304@2|Bacteria,1RA96@1224|Proteobacteria,2U742@28211|Alphaproteobacteria,3JYSW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Inner membrane component domain	MA20_16325	-	-	-	-	-	-	-	-	-	-	-	YccF
SX1_k127_4848634_8	1297865.APJD01000035_gene5453	4.155e-128	411.0	COG2128@1|root,COG2128@2|Bacteria,1NFKC@1224|Proteobacteria,2TQSD@28211|Alphaproteobacteria,3JUX0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	decarboxylase	-	-	4.1.1.44	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220	-	R03470	RC00938	ko00000,ko00001,ko01000	-	-	-	CMD
SX1_k127_4848634_0	1297865.APJD01000035_gene5454	0.0	1091.0	COG5001@1|root,COG5001@2|Bacteria,1NA20@1224|Proteobacteria,2TU3Z@28211|Alphaproteobacteria,3JREN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Putative diguanylate phosphodiesterase	MA20_23465	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,PAS_4
SX1_k127_4848634_4	1297865.APJD01000035_gene5455	2.399e-207	649.0	COG3920@1|root,COG3920@2|Bacteria,1MV4R@1224|Proteobacteria,2U127@28211|Alphaproteobacteria,3JTWU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	HWE histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HWE_HK
SX1_k127_4848634_6	1297865.APJD01000035_gene5456	1.897e-170	537.0	COG1028@1|root,COG1028@2|Bacteria,1R4GD@1224|Proteobacteria,2TVNF@28211|Alphaproteobacteria,3JRXE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_4848634_3	1297865.APJD01000035_gene5457	4.288e-211	657.0	COG2114@1|root,COG2114@2|Bacteria,1MVZU@1224|Proteobacteria,2U128@28211|Alphaproteobacteria,3JVWZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylyl- / guanylyl cyclase, catalytic domain	cyaB	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
SX1_k127_4848634_5	1297865.APJD01000035_gene5458	3.662e-198	617.0	COG2141@1|root,COG2141@2|Bacteria,1NKS6@1224|Proteobacteria,2TT87@28211|Alphaproteobacteria,3JRJ6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Luciferase-like monooxygenase	MA20_23445	-	1.14.13.107	ko:K14733	ko00903,map00903	-	R06398,R09385,R09389,R09393	RC01506	ko00000,ko00001,ko01000	-	-	-	Bac_luciferase
SX1_k127_4852197_2	1297865.APJD01000011_gene6796	1.821e-19	89.0	COG4965@1|root,COG4965@2|Bacteria,1MUXK@1224|Proteobacteria,2TRBI@28211|Alphaproteobacteria,3JR8Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Type II secretion system (T2SS), protein F	MA20_18445	-	-	ko:K12510	-	-	-	-	ko00000,ko02044	-	-	-	T2SSF
SX1_k127_4852197_0	1230476.C207_03049	8.659e-309	947.0	COG4962@1|root,COG4962@2|Bacteria,1R7EN@1224|Proteobacteria,2TRNT@28211|Alphaproteobacteria,3JQZ1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Type II/IV secretion system protein	cpaF	-	-	ko:K02283	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	T2SSE
SX1_k127_4852197_1	1297865.APJD01000011_gene6799	7.769e-43	156.0	COG4963@1|root,COG4963@2|Bacteria,1MWNY@1224|Proteobacteria,2TUDS@28211|Alphaproteobacteria,3JUM3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	AAA domain	cpaE	-	-	ko:K02282	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	AAA_31,CBP_BcsQ
SX1_k127_4853783_1	1297865.APJD01000010_gene4877	6.165e-170	534.0	COG1894@1|root,COG1905@1|root,COG1894@2|Bacteria,COG1905@2|Bacteria,1MV8F@1224|Proteobacteria,2TR1V@28211|Alphaproteobacteria,3JR36@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region	nuoEF	-	1.17.1.9	ko:K00122	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	-	R00519	RC02796	ko00000,ko00001,ko01000	-	-	-	2Fe-2S_thioredx,Complex1_51K,NADH_4Fe-4S,SLBB
SX1_k127_4853783_0	1297865.APJD01000010_gene4878	0.0	1921.0	COG3383@1|root,COG3383@2|Bacteria,1QTZB@1224|Proteobacteria,2TVZI@28211|Alphaproteobacteria,3JTEA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Formate dehydrogenase, alpha subunit	fdhA	-	1.17.1.9	ko:K00123	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	-	R00519	RC02796	ko00000,ko00001,ko01000	-	-	-	Fer2_4,Fer4,Fer4_7,Fer4_9,Molybdop_Fe4S4,Molybdopterin,Molydop_binding
SX1_k127_4853783_2	1297865.APJD01000010_gene4879	1.992e-162	512.0	COG1028@1|root,COG1028@2|Bacteria,1MW4W@1224|Proteobacteria,2V6H7@28211|Alphaproteobacteria,3K4R6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_4853783_3	1297865.APJD01000010_gene4880	3.057e-152	486.0	COG4221@1|root,COG4221@2|Bacteria,1R83E@1224|Proteobacteria,2TVY6@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_4853783_4	1297865.APJD01000010_gene4881	1.165e-34	133.0	COG2207@1|root,COG2207@2|Bacteria,1MY46@1224|Proteobacteria,2TUHY@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_6,HTH_18
SX1_k127_4853890_4	1297865.APJD01000001_gene5985	8.756e-186	587.0	COG4783@1|root,COG4783@2|Bacteria,1MVFV@1224|Proteobacteria,2TTV2@28211|Alphaproteobacteria,3JSBC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Peptidase family M48	MA20_29180	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M48,TPR_16,TPR_19
SX1_k127_4853890_3	1297865.APJD01000001_gene5984	1.644e-238	739.0	COG0436@1|root,COG0436@2|Bacteria,1MW0Z@1224|Proteobacteria,2TS06@28211|Alphaproteobacteria,3JRRH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Aminotransferase class I and II	aspB	-	-	-	-	-	-	-	-	-	-	-	Aminotran_1_2
SX1_k127_4853890_2	1297865.APJD01000001_gene5983	1.223e-274	846.0	COG1301@1|root,COG1301@2|Bacteria,1MU0Q@1224|Proteobacteria,2TRET@28211|Alphaproteobacteria,3JQXY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate	-	-	-	ko:K11103	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.23.1.3,2.A.23.1.6,2.A.23.1.7	-	-	SDF
SX1_k127_4853890_1	1297865.APJD01000001_gene5982	5.041e-277	851.0	COG0665@1|root,COG0665@2|Bacteria,1MVIZ@1224|Proteobacteria,2TSQI@28211|Alphaproteobacteria,3JRWR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	FAD dependent oxidoreductase	MA20_29210	-	1.4.5.1	ko:K00285	ko00360,map00360	-	R01374,R09493	RC00006,RC00025	ko00000,ko00001,ko01000	-	-	-	DAO
SX1_k127_4853890_0	1297865.APJD01000001_gene5981	0.0	1566.0	COG1530@1|root,COG1530@2|Bacteria,1MV65@1224|Proteobacteria,2TRX2@28211|Alphaproteobacteria,3JSGG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs	rne	-	3.1.26.12	ko:K08300	ko03018,map03018	M00394	-	-	ko00000,ko00001,ko00002,ko01000,ko03009,ko03019	-	-	-	RNase_E_G,S1
SX1_k127_4863626_1	1297865.APJD01000019_gene3157	5.006e-79	265.0	COG0477@1|root,COG2814@2|Bacteria,1MWKH@1224|Proteobacteria,2U0GU@28211|Alphaproteobacteria,3JR5H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	MA20_25060	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
SX1_k127_4863626_2	1120792.JAFV01000001_gene3223	8.318e-05	53.0	COG2304@1|root,COG2304@2|Bacteria,1QRPV@1224|Proteobacteria,2U2EX@28211|Alphaproteobacteria,36ZH5@31993|Methylocystaceae	28211|Alphaproteobacteria	S	von Willebrand factor type A domain	mxaC	-	-	ko:K16257	ko00680,ko01120,map00680,map01120	-	-	-	ko00000,ko00001	-	-	-	VWA_2
SX1_k127_4863626_0	1297865.APJD01000019_gene3158	2.529e-177	556.0	COG0405@1|root,COG0405@2|Bacteria,1MUV6@1224|Proteobacteria,2TR49@28211|Alphaproteobacteria,3JRHC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Gamma-glutamyltranspeptidase	ggt	-	2.3.2.2,3.4.19.13	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	-	R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935	RC00064,RC00090,RC00096	ko00000,ko00001,ko01000,ko01002	-	-	-	G_glu_transpept
SX1_k127_4869099_1	1297865.APJD01000003_gene6479	1.169e-209	652.0	COG2070@1|root,COG2070@2|Bacteria,1MU0U@1224|Proteobacteria,2TS5U@28211|Alphaproteobacteria,3JR77@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Nitronate monooxygenase	MA20_20850	-	1.13.12.16	ko:K00459	ko00910,map00910	-	R00025	RC02541,RC02759	ko00000,ko00001,ko01000	-	-	-	NMO
SX1_k127_4869099_3	1297865.APJD01000003_gene6478	6.716e-100	328.0	2934B@1|root,2ZQMF@2|Bacteria,1R4T1@1224|Proteobacteria,2U1KR@28211|Alphaproteobacteria,3JU5Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4869099_2	1297865.APJD01000003_gene6477	1.602e-122	393.0	COG1238@1|root,COG1238@2|Bacteria,1MWED@1224|Proteobacteria,2U78A@28211|Alphaproteobacteria,3JRI3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	DedA family	MA20_20865	-	-	-	-	-	-	-	-	-	-	-	SNARE_assoc
SX1_k127_4869099_4	1297865.APJD01000003_gene6476	6.05e-78	261.0	COG0140@1|root,COG0140@2|Bacteria,1MZEE@1224|Proteobacteria,2U7W6@28211|Alphaproteobacteria,3JZ2R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	phosphoribosyl-ATP diphosphatase activity	MA20_20870	-	3.6.1.31	ko:K01523	ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230	M00026	R04035	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	PRA-PH
SX1_k127_4869099_5	1230476.C207_02602	4.338e-69	238.0	2AN6J@1|root,31D4F@2|Bacteria,1REB1@1224|Proteobacteria,2U9IW@28211|Alphaproteobacteria,3JYW4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4869099_0	1297865.APJD01000003_gene6474	1.436e-219	683.0	COG0715@1|root,COG0715@2|Bacteria,1MW53@1224|Proteobacteria,2TSHF@28211|Alphaproteobacteria,3JSAQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NMT1/THI5 like	-	-	-	ko:K02051	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	NMT1
SX1_k127_4871191_1	1297865.APJD01000028_gene5257	5e-324	990.0	COG0642@1|root,COG2205@2|Bacteria,1MVY8@1224|Proteobacteria,2TS5B@28211|Alphaproteobacteria,3JTRQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Histidine kinase	divL	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_7,PAS_8
SX1_k127_4871191_0	1297865.APJD01000028_gene5256	0.0	1014.0	COG0802@1|root,COG3178@1|root,COG0802@2|Bacteria,COG3178@2|Bacteria,1MXCH@1224|Proteobacteria,2TSJD@28211|Alphaproteobacteria,3JTQ1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Threonylcarbamoyl adenosine biosynthesis protein TsaE	MA20_24090	-	2.7.1.221	ko:K07102	ko00520,ko01100,map00520,map01100	-	R08968,R11024	RC00002,RC00078	ko00000,ko00001,ko01000	-	-	-	APH,TsaE
SX1_k127_4871191_3	398525.KB900701_gene1442	2.163e-68	232.0	2CBFG@1|root,348C5@2|Bacteria,1RM6A@1224|Proteobacteria,2U989@28211|Alphaproteobacteria,3JZKW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_24095	-	-	-	-	-	-	-	-	-	-	-	PilZ
SX1_k127_4871191_2	1297865.APJD01000028_gene5254	1.366e-158	500.0	COG1208@1|root,COG1208@2|Bacteria,1R9ZD@1224|Proteobacteria,2TU2V@28211|Alphaproteobacteria,3JRYE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	JM	Nucleotidyl transferase	MA20_24100	-	2.7.7.13,2.7.7.99	ko:K00966,ko:K00992	ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110	M00114,M00361,M00362	R00885,R11025	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	NTP_transf_3,NTP_transferase
SX1_k127_4875750_7	1297865.APJD01000009_gene2931	3.728e-143	462.0	COG3307@1|root,COG3307@2|Bacteria,1R5EX@1224|Proteobacteria,2TTQF@28211|Alphaproteobacteria,3JTQN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	O-Antigen ligase	-	-	-	-	-	-	-	-	-	-	-	-	Wzy_C
SX1_k127_4875750_3	1297865.APJD01000009_gene2932	2.539e-228	708.0	COG1216@1|root,COG1216@2|Bacteria,1R59U@1224|Proteobacteria,2TV7K@28211|Alphaproteobacteria,3JQXD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Glycosyltransferase like family 2	MA20_06075	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_3,Glycos_transf_2
SX1_k127_4875750_2	1297865.APJD01000009_gene2933	2.707e-242	751.0	COG0535@1|root,COG0535@2|Bacteria,1PYDY@1224|Proteobacteria,2U1D3@28211|Alphaproteobacteria,3JSX2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Iron-sulfur cluster-binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Fer4_14,Radical_SAM,SPASM
SX1_k127_4875750_4	1297865.APJD01000009_gene2934	1.326e-222	691.0	COG4124@1|root,COG4124@2|Bacteria,1N5GF@1224|Proteobacteria,2VF3J@28211|Alphaproteobacteria,3JXTS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Belongs to the glycosyl hydrolase 26 family	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_26
SX1_k127_4875750_9	107636.JQNK01000010_gene678	2.82e-84	289.0	28JFQ@1|root,2Z99M@2|Bacteria,1R9EI@1224|Proteobacteria,2U28H@28211|Alphaproteobacteria,370U9@31993|Methylocystaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4875750_1	1297865.APJD01000009_gene2936	2.431e-284	878.0	COG2244@1|root,COG2244@2|Bacteria,1R5ZA@1224|Proteobacteria,2TRJ5@28211|Alphaproteobacteria,3JT14@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Polysaccharide biosynthesis protein	MA20_09900	-	-	-	-	-	-	-	-	-	-	-	Polysacc_synt,Polysacc_synt_3,Polysacc_synt_C
SX1_k127_4875750_5	1297865.APJD01000009_gene2937	4.091e-176	556.0	COG2227@1|root,COG2227@2|Bacteria,1R5ZG@1224|Proteobacteria,2TZ3A@28211|Alphaproteobacteria,3JVYA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Methyltransferase domain	MA20_06080	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_12,Methyltransf_23
SX1_k127_4875750_6	1297865.APJD01000009_gene2938	3.779e-164	519.0	COG0726@1|root,COG0726@2|Bacteria,1R881@1224|Proteobacteria,2U1Y9@28211|Alphaproteobacteria,3JRCN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
SX1_k127_4875750_0	1297865.APJD01000009_gene2939	0.0	1446.0	COG1192@1|root,COG3206@1|root,COG1192@2|Bacteria,COG3206@2|Bacteria,1R5R1@1224|Proteobacteria,2U0R4@28211|Alphaproteobacteria,3JSHS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	DM	Chain length determinant protein	-	-	-	-	-	-	-	-	-	-	-	-	GNVR,Wzz
SX1_k127_4875750_8	1297865.APJD01000009_gene2940	9.313e-140	449.0	COG2730@1|root,COG2730@2|Bacteria,1N2XP@1224|Proteobacteria,2U7H3@28211|Alphaproteobacteria,3JVIB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Cellulase (glycosyl hydrolase family 5)	-	-	3.2.1.4	ko:K01179	ko00500,ko01100,map00500,map01100	-	R06200,R11307,R11308	-	ko00000,ko00001,ko01000	-	GH5,GH9	-	Cellulase
SX1_k127_4879145_3	1297865.APJD01000009_gene2931	5.182e-90	296.0	COG3307@1|root,COG3307@2|Bacteria,1R5EX@1224|Proteobacteria,2TTQF@28211|Alphaproteobacteria,3JTQN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	O-Antigen ligase	-	-	-	-	-	-	-	-	-	-	-	-	Wzy_C
SX1_k127_4879145_0	1297865.APJD01000009_gene2930	1.913e-225	700.0	COG0438@1|root,COG0438@2|Bacteria,1R535@1224|Proteobacteria,2U0WF@28211|Alphaproteobacteria,3JXDJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	transferase activity, transferring glycosyl groups	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glycos_transf_1
SX1_k127_4879145_1	1297865.APJD01000009_gene2929	1.524e-211	662.0	COG2850@1|root,COG2850@2|Bacteria,1R3U2@1224|Proteobacteria,2U3SX@28211|Alphaproteobacteria,3JX8J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	peptidyl-arginine hydroxylation	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_8
SX1_k127_4879145_2	1297865.APJD01000009_gene2928	4.399e-134	429.0	COG5653@1|root,COG5653@2|Bacteria,1MWS9@1224|Proteobacteria,2TT7E@28211|Alphaproteobacteria,3JSXP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_6
SX1_k127_4888499_0	713586.KB900536_gene1356	2.874e-228	722.0	COG2804@1|root,COG2804@2|Bacteria,1MU7V@1224|Proteobacteria,1RMBS@1236|Gammaproteobacteria,1WXAR@135613|Chromatiales	135613|Chromatiales	NU	TIGRFAM type IV-A pilus assembly ATPase PilB	-	-	-	ko:K02652	-	-	-	-	ko00000,ko02035,ko02044	3.A.15.2	-	-	T2SSE,T2SSE_N
SX1_k127_489365_1	1297865.APJD01000004_gene5354	4.77e-106	344.0	COG1309@1|root,COG1309@2|Bacteria,1N2VD@1224|Proteobacteria,2U0HH@28211|Alphaproteobacteria,3JR4G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_489365_0	1297865.APJD01000004_gene5355	4.247e-138	440.0	COG0625@1|root,COG0625@2|Bacteria,1MY47@1224|Proteobacteria,2U0Y3@28211|Alphaproteobacteria,3JU13@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, C-terminal domain	MA20_04130	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_2,GST_N,GST_N_3
SX1_k127_489365_2	1297865.APJD01000004_gene5356	2.922e-93	305.0	COG3558@1|root,COG3558@2|Bacteria,1RA64@1224|Proteobacteria,2U5FW@28211|Alphaproteobacteria,3JV5M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1348)	MA20_04335	-	-	ko:K09958	-	-	-	-	ko00000	-	-	-	DUF1348
SX1_k127_4925222_8	1230476.C207_00342	2.28e-106	347.0	COG0723@1|root,COG0723@2|Bacteria,1RAA2@1224|Proteobacteria,2TTT2@28211|Alphaproteobacteria,3JT8S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis	petA	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	1.10.2.2	ko:K00411	ko00190,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016	M00151,M00152	-	-	ko00000,ko00001,ko00002,ko01000	-	-	-	Rieske,UCR_Fe-S_N
SX1_k127_4925222_9	1297865.APJD01000007_gene1940	1.644e-98	322.0	COG0219@1|root,COG0219@2|Bacteria,1RCY4@1224|Proteobacteria,2U78W@28211|Alphaproteobacteria,3JYG0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide	trmL	-	2.1.1.207	ko:K03216	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	SpoU_methylase
SX1_k127_4925222_4	1297865.APJD01000007_gene1939	1.56e-140	448.0	COG0602@1|root,COG0602@2|Bacteria,1MUJ2@1224|Proteobacteria,2TU1S@28211|Alphaproteobacteria,3JTHM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds	queE	-	4.3.99.3	ko:K10026	ko00790,ko01100,map00790,map01100	-	R10002	RC02989	ko00000,ko00001,ko01000,ko03016	-	-	-	Fer4_14,Radical_SAM
SX1_k127_4925222_10	1297865.APJD01000007_gene1938	1.749e-76	258.0	COG0720@1|root,COG0720@2|Bacteria,1RI4P@1224|Proteobacteria,2VG5E@28211|Alphaproteobacteria,3JYPG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	6-pyruvoyl tetrahydropterin synthase	queD	-	4.1.2.50,4.2.3.12	ko:K01737	ko00790,ko01100,map00790,map01100	M00842,M00843	R04286,R09959	RC01117,RC02846,RC02847	ko00000,ko00001,ko00002,ko01000,ko03016	-	-	-	PTPS
SX1_k127_4925222_1	1297865.APJD01000007_gene1937	5.42e-208	650.0	COG0408@1|root,COG0408@2|Bacteria,1MWMF@1224|Proteobacteria,2TQNC@28211|Alphaproteobacteria,3JRIR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX	hemF	GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983	1.3.3.3	ko:K00228	ko00860,ko01100,ko01110,map00860,map01100,map01110	M00121	R03220	RC00884	ko00000,ko00001,ko00002,ko01000	-	-	-	Coprogen_oxidas
SX1_k127_4925222_7	1126627.BAWE01000005_gene6326	6.004e-137	439.0	COG1011@1|root,COG1011@2|Bacteria,1PUN6@1224|Proteobacteria,2TY0G@28211|Alphaproteobacteria,3JU2Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	HAD-hyrolase-like	-	-	-	ko:K07025	-	-	-	-	ko00000	-	-	-	HAD_2
SX1_k127_4925222_12	1297865.APJD01000007_gene1935	2.37e-43	159.0	COG5475@1|root,COG5475@2|Bacteria,1N78K@1224|Proteobacteria,2UF86@28211|Alphaproteobacteria,3K0Z9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized small protein (DUF2158)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2158
SX1_k127_4925222_6	1297865.APJD01000007_gene1934	4.351e-138	446.0	COG0730@1|root,COG0730@2|Bacteria,1MUJB@1224|Proteobacteria,2TRWP@28211|Alphaproteobacteria,3JT50@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sulfite exporter TauE/SafE	MA20_44620	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
SX1_k127_4925222_0	1297865.APJD01000007_gene1933	8.929e-268	825.0	COG0617@1|root,COG0617@2|Bacteria,1MVCS@1224|Proteobacteria,2TRPZ@28211|Alphaproteobacteria,3JR2K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Poly A polymerase head domain	pcnB	-	2.7.7.19,2.7.7.72	ko:K00970,ko:K00974	ko03013,ko03018,map03013,map03018	-	R09382,R09383,R09384,R09386	RC00078	ko00000,ko00001,ko01000,ko03016,ko03019	-	-	-	PolyA_pol,PolyA_pol_RNAbd
SX1_k127_4925222_11	1297865.APJD01000007_gene1932	4.465e-45	166.0	2CETE@1|root,32ZH4@2|Bacteria,1N1NH@1224|Proteobacteria,2UBYE@28211|Alphaproteobacteria,3K03U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4925222_3	1297865.APJD01000007_gene1931	2.768e-145	462.0	COG0494@1|root,COG0494@2|Bacteria,1RD2C@1224|Proteobacteria,2TV3Q@28211|Alphaproteobacteria,3JU9N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	NUDIX domain	MA20_44635	-	-	-	-	-	-	-	-	-	-	-	NUDIX
SX1_k127_4925222_5	1297865.APJD01000007_gene1930	4.739e-140	446.0	COG3816@1|root,COG3816@2|Bacteria,1RD5Q@1224|Proteobacteria,2U7DA@28211|Alphaproteobacteria,3JSDP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1285)	MA20_44640	-	-	ko:K09986	-	-	-	-	ko00000	-	-	-	DUF1285
SX1_k127_4925222_2	1297865.APJD01000007_gene1929	1.05e-145	462.0	COG0714@1|root,COG0714@2|Bacteria,1MUFN@1224|Proteobacteria,2TR0T@28211|Alphaproteobacteria,3JTNE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	ATPase family associated with various cellular activities (AAA)	moxR	GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944	-	ko:K03924	-	-	-	-	ko00000,ko01000	-	-	-	AAA_3
SX1_k127_4929394_2	1297865.APJD01000011_gene6696	1.62e-210	653.0	COG1902@1|root,COG1902@2|Bacteria,1MVE0@1224|Proteobacteria,2TQPY@28211|Alphaproteobacteria,3JTE3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NADH:flavin oxidoreductase / NADH oxidase family	-	-	-	-	-	-	-	-	-	-	-	-	Oxidored_FMN
SX1_k127_4929394_3	1297865.APJD01000011_gene6697	7.022e-202	636.0	COG0329@1|root,COG0329@2|Bacteria,1MWV5@1224|Proteobacteria,2TRE1@28211|Alphaproteobacteria,3JW2J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EM	Dihydrodipicolinate synthetase family	MA20_21525	-	4.2.1.43	ko:K13876	ko00053,ko01100,map00053,map01100	-	R02278	RC00429	ko00000,ko00001,ko01000	-	-	-	DHDPS
SX1_k127_4929394_1	1297865.APJD01000011_gene6698	1.411e-245	760.0	2E6HP@1|root,3314Y@2|Bacteria,1QGPJ@1224|Proteobacteria,2UP1A@28211|Alphaproteobacteria,3K3AP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4929394_6	1297865.APJD01000011_gene6699	1.581e-31	134.0	2BR4F@1|root,32K2D@2|Bacteria,1P18J@1224|Proteobacteria,2UU5G@28211|Alphaproteobacteria,3K4ZW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4929394_0	1297865.APJD01000011_gene6700	1.19e-263	813.0	COG2733@1|root,COG2733@2|Bacteria,1MX3G@1224|Proteobacteria,2U15J@28211|Alphaproteobacteria,3JSYM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF445)	-	-	-	-	-	-	-	-	-	-	-	-	DUF445
SX1_k127_4929394_4	1297865.APJD01000011_gene6701	4.006e-165	527.0	2CCV8@1|root,2Z7KX@2|Bacteria,1MY2J@1224|Proteobacteria,2TUT1@28211|Alphaproteobacteria,3JWMV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	EcsC protein family	-	-	-	-	-	-	-	-	-	-	-	-	EcsC
SX1_k127_4929394_5	1297865.APJD01000011_gene6702	8.935e-63	216.0	COG2217@1|root,COG2217@2|Bacteria,1MU08@1224|Proteobacteria,2U0ZY@28211|Alphaproteobacteria,3JWRM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	E1-E2 ATPase	-	-	-	-	-	-	-	-	-	-	-	-	E1-E2_ATPase,Hydrolase
SX1_k127_4930245_8	1297865.APJD01000006_gene4561	3.902e-268	825.0	COG0768@1|root,COG0768@2|Bacteria,1MUNY@1224|Proteobacteria,2TSHQ@28211|Alphaproteobacteria,3JSUN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Penicillin-binding Protein	ftsI	-	3.4.16.4	ko:K03587	ko00550,ko01501,map00550,map01501	-	-	-	ko00000,ko00001,ko01000,ko01011,ko03036	-	-	-	PBP_dimer,Transpeptidase
SX1_k127_4930245_3	1297865.APJD01000006_gene4562	7.893e-305	951.0	COG0769@1|root,COG0769@2|Bacteria,1MU6P@1224|Proteobacteria,2TVXI@28211|Alphaproteobacteria,3JS79@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan	murE	-	6.3.2.13	ko:K01928	ko00300,ko00550,map00300,map00550	-	R02788	RC00064,RC00090	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
SX1_k127_4930245_6	1297865.APJD01000006_gene4563	3.871e-295	919.0	COG0770@1|root,COG0770@2|Bacteria,1QTSF@1224|Proteobacteria,2TR0Q@28211|Alphaproteobacteria,3JT30@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein	murF	-	6.3.2.10,6.3.2.13	ko:K01928,ko:K01929,ko:K15792	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502	-	R02788,R04573,R04617	RC00064,RC00090,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
SX1_k127_4930245_10	1297865.APJD01000006_gene4564	3.047e-236	731.0	COG0472@1|root,COG0472@2|Bacteria,1MUTK@1224|Proteobacteria,2TRUG@28211|Alphaproteobacteria,3JSUT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan	mraY	-	2.7.8.13	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502	-	R05629,R05630	RC00002,RC02753	ko00000,ko00001,ko01000,ko01011	9.B.146	-	-	Glycos_transf_4,MraY_sig1
SX1_k127_4930245_5	1297865.APJD01000006_gene4565	2.499e-299	932.0	COG0771@1|root,COG0771@2|Bacteria,1MVYD@1224|Proteobacteria,2TTE8@28211|Alphaproteobacteria,3JSWK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)	murD	-	6.3.2.9	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100	-	R02783	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase_C,Mur_ligase_M
SX1_k127_4930245_20	224911.27354970	0.0001269	48.0	COG2897@1|root,COG2897@2|Bacteria,1MW4B@1224|Proteobacteria,2TR9R@28211|Alphaproteobacteria,3JT1H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rhodanese Homology Domain	sseA	-	2.8.1.1,2.8.1.2	ko:K01011	ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122	-	R01931,R03105,R03106	RC00214	ko00000,ko00001,ko01000	-	-	-	Rhodanese
SX1_k127_4930245_9	1297865.APJD01000006_gene4566	5.3e-239	743.0	COG0772@1|root,COG0772@2|Bacteria,1MVDB@1224|Proteobacteria,2TQSA@28211|Alphaproteobacteria,3JV9H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Belongs to the SEDS family	ftsW	-	-	ko:K03588	ko04112,map04112	-	-	-	ko00000,ko00001,ko02000,ko03036	2.A.103.1	-	-	FTSW_RODA_SPOVE
SX1_k127_4930245_11	1297865.APJD01000006_gene4567	3.792e-219	702.0	COG0707@1|root,COG0707@2|Bacteria,1MVIB@1224|Proteobacteria,2TSEY@28211|Alphaproteobacteria,3JT97@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)	murG	-	2.4.1.227	ko:K02563	ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112	-	R05032,R05662	RC00005,RC00049	ko00000,ko00001,ko01000,ko01011	-	GT28	-	Glyco_tran_28_C,Glyco_transf_28
SX1_k127_4930245_17	1297865.APJD01000006_gene4568	2.058e-183	576.0	COG4122@1|root,COG4122@2|Bacteria,1MU1P@1224|Proteobacteria,2U3B6@28211|Alphaproteobacteria,3JVUI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_24
SX1_k127_4930245_4	1297865.APJD01000006_gene4569	9.564e-305	936.0	COG0773@1|root,COG0773@2|Bacteria,1MV68@1224|Proteobacteria,2TRT0@28211|Alphaproteobacteria,3JR1R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the MurCDEF family	murC	-	6.3.2.8	ko:K01924	ko00471,ko00550,ko01100,map00471,map00550,map01100	-	R03193	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Mur_ligase,Mur_ligase_C,Mur_ligase_M
SX1_k127_4930245_18	398525.KB900701_gene6680	4.318e-66	226.0	COG2827@1|root,COG2827@2|Bacteria,1MZME@1224|Proteobacteria,2UCNX@28211|Alphaproteobacteria,3JZKX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Excinuclease ABC, C subunit	-	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
SX1_k127_4930245_14	1297865.APJD01000006_gene4570	2.038e-197	616.0	COG0812@1|root,COG0812@2|Bacteria,1MXDH@1224|Proteobacteria,2TRQR@28211|Alphaproteobacteria,3JQP3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Cell wall formation	murB	-	1.3.1.98	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100	-	R03191,R03192	RC02639	ko00000,ko00001,ko01000,ko01011	-	-	-	FAD_binding_4,MurB_C
SX1_k127_4930245_12	1297865.APJD01000006_gene4571	9.075e-210	656.0	COG1181@1|root,COG1181@2|Bacteria,1MUTB@1224|Proteobacteria,2TREC@28211|Alphaproteobacteria,3JR9C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the D-alanine--D-alanine ligase family	ddl	-	6.3.2.4	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502	-	R01150	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011	-	-	-	Dala_Dala_lig_C,Dala_Dala_lig_N
SX1_k127_4930245_19	316055.RPE_2113	5.114e-09	58.0	COG1181@1|root,COG1181@2|Bacteria,1MUTB@1224|Proteobacteria,2TREC@28211|Alphaproteobacteria,3JR9C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the D-alanine--D-alanine ligase family	ddl	-	1.3.1.98,6.3.2.4	ko:K00075,ko:K01921	ko00473,ko00520,ko00550,ko01100,ko01502,map00473,map00520,map00550,map01100,map01502	-	R01150,R03191,R03192	RC00064,RC00141,RC02639	ko00000,ko00001,ko01000,ko01011	-	-	-	Dala_Dala_lig_C,Dala_Dala_lig_N
SX1_k127_4930245_16	1297865.APJD01000006_gene4572	7.498e-191	598.0	COG1589@1|root,COG1589@2|Bacteria,1MY1Q@1224|Proteobacteria,2TQPU@28211|Alphaproteobacteria,3JTKK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Essential cell division protein	ftsQ	-	-	ko:K03589	ko04112,map04112	-	-	-	ko00000,ko00001,ko03036	-	-	-	FtsQ,POTRA_1
SX1_k127_4930245_7	1297865.APJD01000006_gene4573	4.849e-276	854.0	COG0849@1|root,COG0849@2|Bacteria,1MUSR@1224|Proteobacteria,2TQZB@28211|Alphaproteobacteria,3JS4R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring	ftsA	-	-	ko:K03590	ko04112,map04112	-	-	-	ko00000,ko00001,ko03036,ko04812	-	-	-	FtsA,SHS2_FTSA
SX1_k127_4930245_1	1297865.APJD01000006_gene4574	0.0	1127.0	COG0206@1|root,COG0206@2|Bacteria,1MV2X@1224|Proteobacteria,2TS1Q@28211|Alphaproteobacteria,3JTNB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity	ftsZ	-	-	ko:K03531	ko04112,map04112	-	-	-	ko00000,ko00001,ko02048,ko03036,ko04812	-	-	-	FtsZ_C,Tubulin
SX1_k127_4930245_13	1230476.C207_03430	1.749e-197	617.0	COG0774@1|root,COG0774@2|Bacteria,1MV6T@1224|Proteobacteria,2TUHH@28211|Alphaproteobacteria,3JRM4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis	lpxC	-	3.5.1.108	ko:K02535	ko00540,ko01100,map00540,map01100	M00060	R04587	RC00166,RC00300	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	LpxC
SX1_k127_4930245_15	1297865.APJD01000006_gene4576	3.565e-193	603.0	COG4105@1|root,COG4105@2|Bacteria,1MVS5@1224|Proteobacteria,2TRZ5@28211|Alphaproteobacteria,3JT3Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	bamD	-	-	ko:K05807	-	-	-	-	ko00000,ko02000	1.B.33.1	-	-	YfiO
SX1_k127_4930245_2	1297865.APJD01000006_gene4577	0.0	1028.0	COG0497@1|root,COG0497@2|Bacteria,1MUNP@1224|Proteobacteria,2TREW@28211|Alphaproteobacteria,3JUU4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	May be involved in recombinational repair of damaged DNA	recN	-	-	ko:K03631	-	-	-	-	ko00000,ko03400	-	-	-	SMC_N
SX1_k127_4930245_0	1297865.APJD01000006_gene4578	0.0	1433.0	COG0272@1|root,COG0272@2|Bacteria,1MV3R@1224|Proteobacteria,2TRHK@28211|Alphaproteobacteria,3JVTG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA	ligA	GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360	6.5.1.2	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	-	R00382	RC00005	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	BRCT,DNA_ligase_OB,DNA_ligase_ZBD,DNA_ligase_aden,HHH_2
SX1_k127_4939518_9	1297865.APJD01000010_gene4892	4.77e-24	100.0	COG3904@1|root,COG3904@2|Bacteria,1MY3P@1224|Proteobacteria,2U2AS@28211|Alphaproteobacteria,3JRMD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	periplasmic protein	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4939518_6	1297865.APJD01000010_gene4891	1.772e-88	297.0	COG5458@1|root,COG5458@2|Bacteria,1N054@1224|Proteobacteria,2UBY1@28211|Alphaproteobacteria,3JSUQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1489)	MA20_36070	-	-	-	-	-	-	-	-	-	-	-	DUF1489
SX1_k127_4939518_1	1297865.APJD01000010_gene4890	4.231e-178	560.0	2FGXG@1|root,348SR@2|Bacteria,1MXYU@1224|Proteobacteria,2TTD5@28211|Alphaproteobacteria,3JTBT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4939518_8	1297865.APJD01000010_gene4889	1.366e-35	136.0	2DS8Z@1|root,33F1X@2|Bacteria,1N095@1224|Proteobacteria,2UCJ3@28211|Alphaproteobacteria,3K03Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_36060	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4939518_7	1297865.APJD01000010_gene4888	4.535e-70	237.0	COG3753@1|root,COG3753@2|Bacteria,1N7FF@1224|Proteobacteria,2UARR@28211|Alphaproteobacteria,3JYS7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bacterial protein of unknown function (DUF937)	-	-	-	-	-	-	-	-	-	-	-	-	DUF937
SX1_k127_4939518_5	1297865.APJD01000010_gene4887	1.57e-142	454.0	COG0625@1|root,COG0625@2|Bacteria,1PHM1@1224|Proteobacteria,2TTQZ@28211|Alphaproteobacteria,3JVI7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase	gstch10	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C_2,GST_N_3
SX1_k127_4939518_4	1297865.APJD01000010_gene4886	4.661e-143	455.0	COG3821@1|root,COG3821@2|Bacteria,1RDXR@1224|Proteobacteria,2TTTD@28211|Alphaproteobacteria,3JS0T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function, DUF599	-	-	-	-	-	-	-	-	-	-	-	-	DUF599
SX1_k127_4939518_2	1297865.APJD01000010_gene4885	3.149e-176	554.0	2DPWJ@1|root,333PH@2|Bacteria,1QMKY@1224|Proteobacteria,2U09G@28211|Alphaproteobacteria,3JVEJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4939518_3	1297865.APJD01000010_gene4884	4.273e-168	529.0	COG0656@1|root,COG0656@2|Bacteria,1MWFS@1224|Proteobacteria,2TT2Q@28211|Alphaproteobacteria,3JRGG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Aldo/keto reductase family	yafB	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
SX1_k127_4939518_0	1297865.APJD01000010_gene4883	1.023e-290	891.0	COG1858@1|root,COG1858@2|Bacteria,1MV70@1224|Proteobacteria,2TU35@28211|Alphaproteobacteria,3JX58@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Di-haem cytochrome c peroxidase	-	-	1.11.1.5	ko:K00428	-	-	-	-	ko00000,ko01000	-	-	-	CCP_MauG,Cytochrom_C
SX1_k127_4943167_10	1297865.APJD01000006_gene4519	1.493e-109	379.0	COG0730@1|root,COG0730@2|Bacteria,1MVY3@1224|Proteobacteria,2TU6M@28211|Alphaproteobacteria,3JWBV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sulfite exporter TauE/SafE	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
SX1_k127_4943167_2	1297865.APJD01000006_gene4520	3.543e-292	898.0	COG2358@1|root,COG2358@2|Bacteria,1R5N8@1224|Proteobacteria,2TSTB@28211|Alphaproteobacteria,3JQZS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	NMT1-like family	-	-	-	-	-	-	-	-	-	-	-	-	NMT1_3
SX1_k127_4943167_4	1297865.APJD01000006_gene4521	5.977e-232	718.0	COG0438@1|root,COG0438@2|Bacteria,1MUB7@1224|Proteobacteria,2TQQ0@28211|Alphaproteobacteria,3JTNY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	glycosyl transferase group 1	MA20_01620	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1
SX1_k127_4943167_7	1297865.APJD01000006_gene4522	7.952e-143	457.0	COG0500@1|root,COG2226@2|Bacteria,1MVIS@1224|Proteobacteria,2TV8R@28211|Alphaproteobacteria,3JRAV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Methionine biosynthesis protein MetW	pmtA	-	2.1.1.17,2.1.1.71	ko:K00570	ko00564,ko01100,ko01110,map00564,map01100,map01110	M00091	R01320,R02056,R03424	RC00003,RC00060,RC00181,RC00496	ko00000,ko00001,ko00002,ko01000	-	-	-	Methyltransf_11
SX1_k127_4943167_8	1297865.APJD01000006_gene4523	5.239e-136	433.0	28MZJ@1|root,2ZB69@2|Bacteria,1R6VF@1224|Proteobacteria,2U26P@28211|Alphaproteobacteria,3JR7G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_01630	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4943167_12	1038860.AXAP01000060_gene2284	4.316e-06	60.0	COG0135@1|root,COG0135@2|Bacteria,1RA87@1224|Proteobacteria,2U7CH@28211|Alphaproteobacteria,3JRQW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the TrpF family	trpF	-	5.3.1.24	ko:K01817	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00023	R03509	RC00945	ko00000,ko00001,ko00002,ko01000	-	-	-	PRAI
SX1_k127_4943167_0	1297865.APJD01000006_gene4524	0.0	1145.0	COG0001@1|root,COG0001@2|Bacteria,1MUY5@1224|Proteobacteria,2TT6G@28211|Alphaproteobacteria,3JU7G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Aminotransferase class-III	MA20_01635	-	5.4.3.8	ko:K01845	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R02272	RC00677	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3
SX1_k127_4943167_5	1297865.APJD01000006_gene4525	4.883e-190	595.0	COG0688@1|root,COG0688@2|Bacteria,1MVT4@1224|Proteobacteria,2U0K0@28211|Alphaproteobacteria,3JRIP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)	MA20_01640	-	4.1.1.65	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	M00093	R02055	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	PS_Dcarbxylase
SX1_k127_4943167_6	1297865.APJD01000006_gene4526	7.03e-157	497.0	COG1051@1|root,COG1051@2|Bacteria,1R5RJ@1224|Proteobacteria,2U1BJ@28211|Alphaproteobacteria,3JV0X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	NUDIX domain	-	-	3.6.1.55	ko:K03574	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	NUDIX
SX1_k127_4943167_1	1297865.APJD01000006_gene4527	2.836e-305	940.0	COG4254@1|root,COG4254@2|Bacteria,1N3NK@1224|Proteobacteria,2TV69@28211|Alphaproteobacteria,3JUIR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	FecR protein	-	-	-	-	-	-	-	-	-	-	-	-	FecR
SX1_k127_4943167_9	1297865.APJD01000006_gene4528	7.51e-121	389.0	COG2917@1|root,COG2917@2|Bacteria,1P9FF@1224|Proteobacteria,2TR7Y@28211|Alphaproteobacteria,3JVWH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Intracellular septation protein A	-	-	-	-	-	-	-	-	-	-	-	-	IspA
SX1_k127_4943167_3	1297865.APJD01000006_gene4529	6.386e-235	728.0	COG2207@1|root,COG2207@2|Bacteria,1P4M5@1224|Proteobacteria,2U37A@28211|Alphaproteobacteria,3JWQY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
SX1_k127_4943167_11	1297865.APJD01000006_gene4530	2.136e-74	250.0	COG4731@1|root,COG4731@2|Bacteria,1MY67@1224|Proteobacteria,2TZZE@28211|Alphaproteobacteria,3JWVG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized protein conserved in bacteria (DUF2147)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2147
SX1_k127_4949811_2	1297865.APJD01000026_gene2488	4.18e-50	178.0	2ADNE@1|root,313D7@2|Bacteria,1N6CH@1224|Proteobacteria,2UCFY@28211|Alphaproteobacteria,3K0KN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PilZ domain	-	-	-	-	-	-	-	-	-	-	-	-	PilZ
SX1_k127_4949811_1	1297865.APJD01000026_gene2489	0.0	1384.0	COG0210@1|root,COG0210@2|Bacteria,1MU0G@1224|Proteobacteria,2TQSC@28211|Alphaproteobacteria,3JSH5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	UvrD-like helicase C-terminal domain	uvrD	-	3.6.4.12	ko:K03657	ko03420,ko03430,map03420,map03430	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	UvrD-helicase,UvrD_C
SX1_k127_4949811_5	1297865.APJD01000026_gene2490	2.589e-44	162.0	2A8P1@1|root,30XRM@2|Bacteria,1RGX3@1224|Proteobacteria,2UA8N@28211|Alphaproteobacteria,3JZEU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_28755	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4949811_3	1297865.APJD01000026_gene2491	1.647e-46	169.0	29FGA@1|root,302DY@2|Bacteria,1N625@1224|Proteobacteria,2UEHR@28211|Alphaproteobacteria,3K0IZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4949811_7	1230476.C207_07051	1.035e-27	112.0	2BP8N@1|root,32I07@2|Bacteria,1NAZD@1224|Proteobacteria,2UGSV@28211|Alphaproteobacteria,3K0WU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3072)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3072
SX1_k127_4949811_4	1230476.C207_07050	1.695e-44	163.0	2AFU5@1|root,315WI@2|Bacteria,1NFFC@1224|Proteobacteria,2UGVX@28211|Alphaproteobacteria,3K16C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4949811_6	1297865.APJD01000026_gene2492	9.362e-41	152.0	2AC9Z@1|root,311UQ@2|Bacteria,1N2DM@1224|Proteobacteria,2UCR4@28211|Alphaproteobacteria,3K0QF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4949811_0	172088.AUGA01000022_gene560	0.0	1394.0	COG0642@1|root,COG0745@1|root,COG0784@1|root,COG0840@1|root,COG1511@1|root,COG2203@1|root,COG0745@2|Bacteria,COG0784@2|Bacteria,COG0840@2|Bacteria,COG1511@2|Bacteria,COG2203@2|Bacteria,COG2205@2|Bacteria,1NRP8@1224|Proteobacteria,2TWQB@28211|Alphaproteobacteria,3JQWC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Domain present in phytochromes and cGMP-specific phosphodiesterases.	MA20_07280	-	-	-	-	-	-	-	-	-	-	-	GAF_2,HATPase_c,HisKA,Response_reg
SX1_k127_4962179_7	1297865.APJD01000009_gene2990	1.439e-103	336.0	COG0476@1|root,COG0476@2|Bacteria,1QUMS@1224|Proteobacteria,2TT9V@28211|Alphaproteobacteria,3JX8K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	ThiF family	-	-	2.7.7.80	ko:K21029	ko04122,map04122	-	R07459	RC00043	ko00000,ko00001,ko01000	-	-	-	ThiF
SX1_k127_4962179_3	1297865.APJD01000009_gene2989	8.346e-239	743.0	2A8NZ@1|root,30XRJ@2|Bacteria,1MVEQ@1224|Proteobacteria,2U0DB@28211|Alphaproteobacteria,3JX3P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4962179_2	1297865.APJD01000009_gene2988	3.349e-253	782.0	COG0454@1|root,COG0456@2|Bacteria,1PMA3@1224|Proteobacteria,2TUU2@28211|Alphaproteobacteria,3JV3R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	acetyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4962179_4	1297865.APJD01000009_gene2987	2.673e-207	664.0	COG0778@1|root,COG0778@2|Bacteria,1NTK9@1224|Proteobacteria,2TR3E@28211|Alphaproteobacteria,3JV2W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Nitroreductase	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4962179_9	1230476.C207_04295	1.139e-36	139.0	297CE@1|root,2ZUJZ@2|Bacteria,1N70S@1224|Proteobacteria,2UHEE@28211|Alphaproteobacteria,3K0J5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_06225	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4962179_10	172088.AUGA01000001_gene6300	3.188e-05	47.0	2EHAM@1|root,33B2H@2|Bacteria,1RAIW@1224|Proteobacteria,2U5TZ@28211|Alphaproteobacteria,3JY03@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4962179_6	1297865.APJD01000009_gene2985	3.256e-121	389.0	COG1618@1|root,COG1618@2|Bacteria,1RHUK@1224|Proteobacteria,2U9YB@28211|Alphaproteobacteria,3JYCD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Protein of unknown function (DUF2478)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2478
SX1_k127_4962179_0	1297865.APJD01000009_gene2984	2.555e-306	939.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,3JVNS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde dehydrogenase family	-	-	-	-	-	-	-	-	-	-	-	-	Aldedh
SX1_k127_4962179_8	1297865.APJD01000009_gene2983	3.414e-75	259.0	2ECDR@1|root,336BZ@2|Bacteria,1RETI@1224|Proteobacteria,2U6SD@28211|Alphaproteobacteria,3JZ2N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4962179_5	1230476.C207_04294	1.733e-175	552.0	COG4221@1|root,COG4221@2|Bacteria,1MVYG@1224|Proteobacteria,2TWIJ@28211|Alphaproteobacteria,3JU0W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_4962179_11	1101190.ARWB01000001_gene2643	0.0008199	48.0	COG0523@1|root,COG0523@2|Bacteria,1MVZV@1224|Proteobacteria,2TS4B@28211|Alphaproteobacteria,36XEC@31993|Methylocystaceae	28211|Alphaproteobacteria	S	Cobalamin synthesis protein cobW C-terminal domain	p47K	-	-	-	-	-	-	-	-	-	-	-	CobW_C,cobW
SX1_k127_4962179_1	1297865.APJD01000009_gene2981	5.638e-261	805.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,3JS1H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde dehydrogenase family	MA20_06215	-	1.2.1.3	ko:K00128	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	M00135	R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
SX1_k127_496746_13	1297865.APJD01000020_gene291	4.225e-95	315.0	2BTXT@1|root,32P5Z@2|Bacteria,1RETA@1224|Proteobacteria,2U7HW@28211|Alphaproteobacteria,3JYZY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF992)	-	-	-	-	-	-	-	-	-	-	-	-	DUF992
SX1_k127_496746_0	1297865.APJD01000020_gene293	0.0	3414.0	COG2373@1|root,COG2373@2|Bacteria,1MV7J@1224|Proteobacteria,2TSAE@28211|Alphaproteobacteria,3JTU5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Alpha-2-Macroglobulin	MA20_30110	-	-	ko:K06894	-	-	-	-	ko00000	-	-	-	A2M,A2M_N,A2M_N_2,MG1,PAN_1,Thiol-ester_cl
SX1_k127_496746_1	1297865.APJD01000020_gene294	0.0	1400.0	COG4953@1|root,COG4953@2|Bacteria,1MUA9@1224|Proteobacteria,2TR2R@28211|Alphaproteobacteria,3JS2X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Penicillin-Binding Protein C-terminus Family	pbpC	-	2.4.1.129	ko:K05367	ko00550,map00550	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	BiPBP_C,Transgly,Transpeptidase
SX1_k127_496746_3	1297865.APJD01000020_gene295	0.0	1109.0	COG1807@1|root,COG1807@2|Bacteria,1NMIZ@1224|Proteobacteria,2TRS4@28211|Alphaproteobacteria,3JUHV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	glycosyl transferase, family 39	MA20_30100	-	-	-	-	-	-	-	-	-	-	-	PMT,PMT_2
SX1_k127_496746_8	1297865.APJD01000020_gene296	1.022e-166	529.0	COG0671@1|root,COG0671@2|Bacteria,1N7CW@1224|Proteobacteria,2TRDP@28211|Alphaproteobacteria,3JSYX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acid phosphatase homologues	lpxE	-	3.6.1.27	ko:K19302	ko00550,map00550	-	R05627	RC00002	ko00000,ko00001,ko01000,ko01011	-	-	-	PAP2
SX1_k127_496746_12	1297865.APJD01000020_gene297	4.835e-153	488.0	COG0463@1|root,COG0463@2|Bacteria,1MW2G@1224|Proteobacteria,2TTR9@28211|Alphaproteobacteria,3JRY7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Glycosyl transferase family 2	MA20_30090	-	2.4.1.83	ko:K00721	ko00510,ko01100,map00510,map01100	-	R01009	RC00005	ko00000,ko00001,ko01000,ko01003	-	GT2	-	Glycos_transf_2
SX1_k127_496746_14	1297865.APJD01000020_gene298	4.038e-64	226.0	COG3952@1|root,COG3952@2|Bacteria,1MZ60@1224|Proteobacteria,2UCCY@28211|Alphaproteobacteria,3JYUH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Lipid A Biosynthesis N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	LAB_N
SX1_k127_496746_2	1297865.APJD01000020_gene299	0.0	1161.0	COG0739@1|root,COG0739@2|Bacteria,1MVTF@1224|Proteobacteria,2U2NN@28211|Alphaproteobacteria,3JW5H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Peptidase family M23	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
SX1_k127_496746_4	1297865.APJD01000020_gene300	0.0	1037.0	COG1283@1|root,COG1283@2|Bacteria,1MUDE@1224|Proteobacteria,2TRF9@28211|Alphaproteobacteria,3JTC5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	MA20_30080	-	-	ko:K03324	-	-	-	-	ko00000,ko02000	2.A.58.2	-	-	Na_Pi_cotrans,PhoU
SX1_k127_496746_16	1230476.C207_00980	2.046e-46	168.0	29CXU@1|root,2ZZVX@2|Bacteria,1N1UK@1224|Proteobacteria,2UCXX@28211|Alphaproteobacteria,3K03H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_24680	-	-	-	-	-	-	-	-	-	-	-	PilZ
SX1_k127_496746_11	1297865.APJD01000020_gene302	7.843e-154	488.0	COG5010@1|root,COG5010@2|Bacteria,1MVTK@1224|Proteobacteria,2TVD4@28211|Alphaproteobacteria,3JRRX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_11,TPR_16,TPR_19,TPR_2,TPR_4,TPR_8
SX1_k127_496746_7	1297865.APJD01000020_gene303	5.901e-264	826.0	COG4963@1|root,COG4963@2|Bacteria,1MWNY@1224|Proteobacteria,2TUDS@28211|Alphaproteobacteria,3JSEM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Cellulose biosynthesis protein BcsQ	cpaE	-	-	ko:K02282	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	AAA_31,CBP_BcsQ
SX1_k127_496746_10	1297865.APJD01000020_gene304	1.113e-159	503.0	COG5461@1|root,COG5461@2|Bacteria,1MWWE@1224|Proteobacteria,2TU2Q@28211|Alphaproteobacteria,3JQNJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	TIGRFAM pilus (Caulobacter type) biogenesis lipoprotein CpaD	cpaD	-	-	ko:K02281	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	Pilus_CpaD
SX1_k127_496746_5	1297865.APJD01000020_gene305	2.551e-291	897.0	COG4964@1|root,COG4964@2|Bacteria,1MV8G@1224|Proteobacteria,2TRNN@28211|Alphaproteobacteria,3JTDQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Bacterial type II and III secretion system protein	cpaC	-	-	ko:K02280	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	BON,Secretin,T2SS-T3SS_pil_N
SX1_k127_496746_9	1297865.APJD01000020_gene306	1.549e-164	518.0	COG3745@1|root,COG3745@2|Bacteria,1MW75@1224|Proteobacteria,2TTPE@28211|Alphaproteobacteria,3JTGM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	pilus assembly protein CpaB	cpaB	-	-	ko:K02279	-	-	-	-	ko00000,ko02035,ko02044	-	-	-	RcpC,SAF
SX1_k127_496746_6	1297865.APJD01000020_gene307	7.119e-267	822.0	COG0626@1|root,COG0626@2|Bacteria,1MU9E@1224|Proteobacteria,2TS8Z@28211|Alphaproteobacteria,3JT5G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	cystathionine beta-lyase	metC	-	4.4.1.8	ko:K01760	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	M00017	R00782,R01286,R02408,R04941	RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303	ko00000,ko00001,ko00002,ko01000	-	-	-	Cys_Met_Meta_PP
SX1_k127_496746_17	1297865.APJD01000020_gene308	1.285e-38	144.0	COG0834@1|root,COG0834@2|Bacteria,1MV5D@1224|Proteobacteria,2TSRF@28211|Alphaproteobacteria,3JTG4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	ET	Belongs to the bacterial solute-binding protein 3 family	MA20_30070	-	-	ko:K09969	ko02010,map02010	M00232	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3.18,3.A.1.3.7,3.A.1.3.8	-	-	SBP_bac_3
SX1_k127_4971275_2	1123261.AXDW01000001_gene1059	4.841e-09	61.0	COG2956@1|root,COG2956@2|Bacteria,1MVDP@1224|Proteobacteria,1RP29@1236|Gammaproteobacteria,1X361@135614|Xanthomonadales	135614|Xanthomonadales	G	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane	lapB	-	-	ko:K19804	-	-	-	-	ko00000	-	-	-	TPR_16,TPR_7
SX1_k127_4971275_1	1163407.UU7_01232	2.522e-17	85.0	COG1555@1|root,COG1555@2|Bacteria,1N6Q3@1224|Proteobacteria,1SC7U@1236|Gammaproteobacteria,1X84H@135614|Xanthomonadales	135614|Xanthomonadales	L	competence protein ComEA	comEA	-	-	ko:K02237	-	M00429	-	-	ko00000,ko00002,ko02044	3.A.11.1,3.A.11.2	-	-	HHH_3
SX1_k127_4971275_0	312153.Pnuc_1717	6.101e-108	358.0	COG1210@1|root,COG1210@2|Bacteria,1MV5F@1224|Proteobacteria,2VH00@28216|Betaproteobacteria,1K05P@119060|Burkholderiaceae	28216|Betaproteobacteria	M	UTP-glucose-1-phosphate uridylyltransferase	galU	-	2.7.7.9	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	M00129,M00361,M00362,M00549	R00289	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	NTP_transferase
SX1_k127_4979035_0	1297865.APJD01000004_gene5365	0.0	1170.0	COG0457@1|root,COG2114@1|root,COG5616@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,COG5616@2|Bacteria,1MUMZ@1224|Proteobacteria,2TRUI@28211|Alphaproteobacteria,3JR8W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylate cyclase	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc
SX1_k127_4979035_2	1297865.APJD01000004_gene5364	1.045e-296	914.0	COG0840@1|root,COG0840@2|Bacteria,1NJXF@1224|Proteobacteria,2TTNX@28211|Alphaproteobacteria,3JT7C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NT	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).	MA20_17940	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	MCPsignal
SX1_k127_4979035_1	1297865.APJD01000004_gene5363	0.0	1088.0	COG0840@1|root,COG0840@2|Bacteria,1NJXF@1224|Proteobacteria,2TTNX@28211|Alphaproteobacteria,3JUAM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NT	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	MCPsignal,PilZ
SX1_k127_4979035_4	1297865.APJD01000004_gene5362	1.662e-151	480.0	COG0217@1|root,COG0217@2|Bacteria,1MW3X@1224|Proteobacteria,2TRSK@28211|Alphaproteobacteria,3JRDF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	transcriptional regulatory protein	MA20_17930	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	-	-	-	-	-	-	-	-	-	Transcrip_reg
SX1_k127_4979035_6	1297865.APJD01000004_gene5361	1.615e-105	347.0	COG0817@1|root,COG0817@2|Bacteria,1MUJI@1224|Proteobacteria,2U70Z@28211|Alphaproteobacteria,3JSNW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group	ruvC	GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0031668,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576	3.1.22.4	ko:K01159	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	RuvC
SX1_k127_4979035_5	1297865.APJD01000004_gene5360	1.011e-122	394.0	COG0632@1|root,COG0632@2|Bacteria,1MWJR@1224|Proteobacteria,2TSKM@28211|Alphaproteobacteria,3JS1W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB	ruvA	GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496	3.6.4.12	ko:K03550	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	HHH_5,RuvA_C,RuvA_N
SX1_k127_4979035_3	1297865.APJD01000004_gene5359	1.546e-217	677.0	COG2255@1|root,COG2255@2|Bacteria,1MU38@1224|Proteobacteria,2TQNG@28211|Alphaproteobacteria,3JRKW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing	ruvB	GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496	3.6.4.12	ko:K03551	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	RuvB_C,RuvB_N
SX1_k127_4979035_7	1297865.APJD01000004_gene5358	2.61e-14	74.0	COG1408@1|root,COG1408@2|Bacteria,1MUH5@1224|Proteobacteria,2TVHN@28211|Alphaproteobacteria,3JR2C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Calcineurin-like phosphoesterase superfamily domain	ykuE	-	-	ko:K07098	-	-	-	-	ko00000	-	-	-	Metallophos
SX1_k127_4981699_3	398525.KB900701_gene1657	1.244e-165	522.0	COG2124@1|root,COG2124@2|Bacteria,1MV75@1224|Proteobacteria,2TSV7@28211|Alphaproteobacteria,3JQV5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Cytochrome P450	MA20_25190	-	1.14.14.1	ko:K00493	ko00071,ko00380,ko00627,ko01120,map00071,map00380,map00627,map01120	-	R03629,R04121,R05259	RC00046,RC01311	ko00000,ko00001,ko01000	-	-	-	p450
SX1_k127_4981699_1	1297865.APJD01000019_gene3184	3.174e-296	909.0	COG1075@1|root,COG1075@2|Bacteria,1MWM9@1224|Proteobacteria,2TS9F@28211|Alphaproteobacteria,3JSV7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	acetyltransferases and hydrolases with the alpha beta hydrolase fold	MA20_25185	-	-	-	-	-	-	-	-	-	-	-	Lipase_2
SX1_k127_4981699_0	398525.KB900701_gene1655	0.0	1042.0	COG0477@1|root,COG0477@2|Bacteria,1MXZ3@1224|Proteobacteria,2TSHC@28211|Alphaproteobacteria,3JQR9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Transmembrane secretion effector	-	-	-	-	-	-	-	-	-	-	-	-	MFS_3
SX1_k127_4981699_5	1297865.APJD01000019_gene3182	3.145e-36	137.0	2BSH8@1|root,314FI@2|Bacteria,1NA6R@1224|Proteobacteria,2UF6E@28211|Alphaproteobacteria,3K0XJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Cys_rich_FGFR
SX1_k127_4981699_4	1297865.APJD01000019_gene3181	9.383e-49	178.0	2EHBN@1|root,30YYP@2|Bacteria,1RJQ7@1224|Proteobacteria,2U9QT@28211|Alphaproteobacteria,3JZK4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4981699_2	1297865.APJD01000019_gene3180	4.033e-220	684.0	COG0726@1|root,COG0726@2|Bacteria,1PJQG@1224|Proteobacteria,2TUBN@28211|Alphaproteobacteria,3JS2J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Polysaccharide deacetylase	MA20_25165	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
SX1_k127_4985798_4	172088.AUGA01000013_gene7315	1.204e-93	308.0	COG1173@1|root,COG1173@2|Bacteria,1MWMX@1224|Proteobacteria,2TRX5@28211|Alphaproteobacteria,3JRYA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Binding-protein-dependent transport system inner membrane component	MA20_22930	-	-	ko:K02034	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1,OppC_N
SX1_k127_4985798_3	1307436.PBF_23118	2.196e-113	377.0	COG0444@1|root,COG0444@2|Bacteria,1TP6E@1239|Firmicutes,4HA4E@91061|Bacilli,1ZB72@1386|Bacillus	91061|Bacilli	P	Belongs to the ABC transporter superfamily	-	-	-	ko:K02031	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
SX1_k127_4985798_2	1297865.APJD01000003_gene6117	3.263e-217	682.0	COG4608@1|root,COG4608@2|Bacteria,1NU4K@1224|Proteobacteria,2TQTV@28211|Alphaproteobacteria,3JRYC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the ABC transporter superfamily	MA20_22940	-	-	ko:K02032,ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25	-	-	ABC_tran,oligo_HPY
SX1_k127_4985798_0	1297865.APJD01000003_gene6116	0.0	1296.0	COG4770@1|root,COG4770@2|Bacteria,1P6RE@1224|Proteobacteria,2TRC2@28211|Alphaproteobacteria,3JR6K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Biotin carboxylase C-terminal domain	MA20_22950	-	6.4.1.5	ko:K13777	ko00281,map00281	-	R03494	RC00367,RC00942	ko00000,ko00001,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2
SX1_k127_4985798_1	1297865.APJD01000003_gene6115	0.0	1077.0	COG4799@1|root,COG4799@2|Bacteria,1MVAX@1224|Proteobacteria,2TRV6@28211|Alphaproteobacteria,3JS1P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Carboxyl transferase domain	MA20_22955	-	6.4.1.5	ko:K13778	ko00281,map00281	-	R03494	RC00367,RC00942	ko00000,ko00001,ko01000	-	-	-	Carboxyl_trans
SX1_k127_4985798_5	1297865.APJD01000003_gene6114	1.214e-71	242.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JTDD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	-	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
SX1_k127_4995991_3	1297865.APJD01000003_gene6440	1.878e-66	228.0	2BTAI@1|root,32NG2@2|Bacteria,1RCZ2@1224|Proteobacteria,2U8J9@28211|Alphaproteobacteria,3JYZ4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_4995991_0	1297865.APJD01000003_gene6441	0.0	1004.0	COG1541@1|root,COG1541@2|Bacteria,1QA9A@1224|Proteobacteria,2V90P@28211|Alphaproteobacteria,3JYDN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)	-	-	6.2.1.30	ko:K01912	ko00360,ko01120,ko05111,map00360,map01120,map05111	-	R02539	RC00004,RC00014	ko00000,ko00001,ko01000	-	-	-	-
SX1_k127_4995991_1	1297865.APJD01000003_gene6442	2.841e-161	515.0	COG0842@1|root,COG0842@2|Bacteria,1MUF4@1224|Proteobacteria,2TRTS@28211|Alphaproteobacteria,3K355@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	ABC-2 type transporter	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane
SX1_k127_4995991_2	1297865.APJD01000003_gene6443	5.469e-131	419.0	COG1131@1|root,COG1131@2|Bacteria,1MUX3@1224|Proteobacteria,2TSC5@28211|Alphaproteobacteria,3K382@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	ATPases associated with a variety of cellular activities	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran
SX1_k127_4996734_0	1297865.APJD01000018_gene5696	0.0	5837.0	COG3210@1|root,COG3210@2|Bacteria,1MXIP@1224|Proteobacteria,2TTVB@28211|Alphaproteobacteria,3K3NX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	haemagglutination activity domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF3739,Haemagg_act
SX1_k127_5012929_1	1297865.APJD01000003_gene6324	5.569e-126	403.0	COG1638@1|root,COG1638@2|Bacteria,1MVHC@1224|Proteobacteria,2TRZE@28211|Alphaproteobacteria,3JR3T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	DctP
SX1_k127_5012929_0	1297865.APJD01000003_gene6323	0.0	1288.0	COG4191@1|root,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TQTN@28211|Alphaproteobacteria,3JUK1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Histidine kinase	MA20_22730	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,PAS_4,PAS_8
SX1_k127_5017121_2	1297865.APJD01000014_gene957	1e-228	708.0	COG2957@1|root,COG2957@2|Bacteria,1MX65@1224|Proteobacteria,2U0RR@28211|Alphaproteobacteria,3JXN8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Porphyromonas-type peptidyl-arginine deiminase	aguA	-	3.5.3.12	ko:K10536	ko00330,ko01100,map00330,map01100	-	R01416	RC00177	ko00000,ko00001,ko01000	-	-	-	PAD_porph
SX1_k127_5017121_1	172088.AUGA01000020_gene3621	9.95e-254	784.0	COG1473@1|root,COG1473@2|Bacteria,1MUIV@1224|Proteobacteria,2TR5B@28211|Alphaproteobacteria,3JSSH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	MA20_09240	-	-	-	-	-	-	-	-	-	-	-	M20_dimer,Peptidase_M20
SX1_k127_5017121_4	1297865.APJD01000014_gene955	9.541e-132	426.0	COG2197@1|root,COG2197@2|Bacteria,1MWGM@1224|Proteobacteria,2U0JP@28211|Alphaproteobacteria,3JU69@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	helix_turn_helix, Lux Regulon	MA20_09265	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
SX1_k127_5017121_0	1297865.APJD01000014_gene954	4.715e-278	860.0	COG4585@1|root,COG4585@2|Bacteria,1MWPN@1224|Proteobacteria,2TUJ5@28211|Alphaproteobacteria,3JTN7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Histidine kinase	MA20_09270	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA_3
SX1_k127_5017121_3	1297865.APJD01000014_gene953	1.399e-152	483.0	COG0811@1|root,COG0811@2|Bacteria,1PPAP@1224|Proteobacteria,2TS0F@28211|Alphaproteobacteria,3JSC6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	MotA/TolQ/ExbB proton channel family	MA20_09275	-	-	-	-	-	-	-	-	-	-	-	MotA_ExbB
SX1_k127_5017670_0	983917.RGE_27480	3.133e-150	479.0	COG0330@1|root,COG0330@2|Bacteria,1MV7R@1224|Proteobacteria,2VI9W@28216|Betaproteobacteria,1KJ28@119065|unclassified Burkholderiales	28216|Betaproteobacteria	O	HflC and HflK could regulate a protease	hflC	-	-	ko:K04087	-	M00742	-	-	ko00000,ko00002,ko01000	-	-	-	Band_7
SX1_k127_5017670_1	987059.RBXJA2T_17951	3.165e-111	363.0	COG0330@1|root,COG0330@2|Bacteria,1MUM2@1224|Proteobacteria,2VIG2@28216|Betaproteobacteria,1KJG9@119065|unclassified Burkholderiales	28216|Betaproteobacteria	O	HflC and HflK could encode or regulate a protease	hflK	-	-	ko:K04088	-	M00742	-	-	ko00000,ko00002,ko01000	-	-	-	Band_7,HflK_N
SX1_k127_5025059_8	1297865.APJD01000010_gene4975	4.479e-131	420.0	COG4977@1|root,COG4977@2|Bacteria,1MUDK@1224|Proteobacteria,2TS7I@28211|Alphaproteobacteria,3JR98@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	DJ-1/PfpI family	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI,HTH_18
SX1_k127_5025059_6	1297865.APJD01000010_gene4974	7.495e-139	450.0	COG1418@1|root,COG1418@2|Bacteria,1MV0J@1224|Proteobacteria,2TVFS@28211|Alphaproteobacteria,3JQWX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metal dependent phosphohydrolases with conserved 'HD' motif.	-	-	-	-	-	-	-	-	-	-	-	-	HD
SX1_k127_5025059_11	1297865.APJD01000010_gene4973	7.416e-95	319.0	COG3832@1|root,COG3832@2|Bacteria,1Q51U@1224|Proteobacteria,2TSKI@28211|Alphaproteobacteria,3JW89@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
SX1_k127_5025059_4	1297865.APJD01000010_gene4972	1.934e-232	724.0	COG2114@1|root,COG2114@2|Bacteria,1N3JU@1224|Proteobacteria,2U05E@28211|Alphaproteobacteria,3JTMH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
SX1_k127_5025059_12	1230476.C207_05754	3.532e-39	148.0	2EHXX@1|root,33BPE@2|Bacteria,1N90E@1224|Proteobacteria,2UFK2@28211|Alphaproteobacteria,3K14U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5025059_3	1297865.APJD01000010_gene4970	1.989e-242	752.0	COG0745@1|root,COG0745@2|Bacteria,1MX29@1224|Proteobacteria,2TV8G@28211|Alphaproteobacteria,3JR5C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KT	RESPONSE REGULATOR receiver	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5025059_7	1297865.APJD01000010_gene4969	4.895e-137	443.0	COG3391@1|root,COG3391@2|Bacteria,1N25Z@1224|Proteobacteria,2TUAK@28211|Alphaproteobacteria,3JUD4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PQQ-like domain	MA20_01585	-	-	-	-	-	-	-	-	-	-	-	Glu_cyclase_2,PQQ_2
SX1_k127_5025059_2	1297865.APJD01000010_gene4968	1.258e-255	791.0	COG0477@1|root,COG2814@2|Bacteria,1MX2P@1224|Proteobacteria,2TUAS@28211|Alphaproteobacteria,3JQNE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	MA20_27720	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_5025059_1	1297865.APJD01000010_gene4967	5.663e-298	918.0	COG1690@1|root,COG1690@2|Bacteria,1MUHA@1224|Proteobacteria,2U2PN@28211|Alphaproteobacteria,3JVRJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	tRNA-splicing ligase RtcB	-	-	6.5.1.3	ko:K14415	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	RtcB
SX1_k127_5025059_9	1297865.APJD01000010_gene4966	9.109e-114	372.0	COG3911@1|root,COG3911@2|Bacteria,1RD7P@1224|Proteobacteria,2U76H@28211|Alphaproteobacteria,3JZ95@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	AAA domain	-	-	-	-	-	-	-	-	-	-	-	-	AAA_28
SX1_k127_5025059_0	1297865.APJD01000010_gene4965	0.0	1679.0	COG4775@1|root,COG4775@2|Bacteria,1MU0D@1224|Proteobacteria,2TR7W@28211|Alphaproteobacteria,3JT8X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	bamA	-	-	ko:K07277	-	-	-	-	ko00000,ko02000,ko03029	1.B.33	-	-	Bac_surface_Ag,POTRA
SX1_k127_5025059_5	1297865.APJD01000010_gene4964	2.47e-151	479.0	COG0745@1|root,COG0745@2|Bacteria,1MY3D@1224|Proteobacteria,2TTKG@28211|Alphaproteobacteria,3JTI1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Transcriptional regulatory protein, C terminal	-	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
SX1_k127_5025059_10	1297865.APJD01000010_gene4963	1.864e-96	329.0	COG0642@1|root,COG2205@2|Bacteria,1MUAK@1224|Proteobacteria,2TSUC@28211|Alphaproteobacteria,3JVQQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain	-	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
SX1_k127_5025369_0	1297865.APJD01000005_gene4005	0.0	1474.0	COG1450@1|root,COG1450@2|Bacteria,1MUUA@1224|Proteobacteria,2TT8A@28211|Alphaproteobacteria,3JRKS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	general secretion pathway protein D	-	-	-	ko:K02453	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	Secretin,Secretin_N
SX1_k127_5025369_4	1297865.APJD01000005_gene4004	2.403e-134	429.0	COG3904@1|root,COG3904@2|Bacteria,1R4PW@1224|Proteobacteria,2U3UG@28211|Alphaproteobacteria,3JXXM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	periplasmic protein	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5025369_6	1297865.APJD01000005_gene4003	2.22e-33	130.0	2CIPF@1|root,2ZZJU@2|Bacteria,1N0PV@1224|Proteobacteria,2UCWG@28211|Alphaproteobacteria,3K04R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5025369_1	1297865.APJD01000005_gene4002	5.075e-265	819.0	COG0389@1|root,COG0389@2|Bacteria,1MUUH@1224|Proteobacteria,2TRWG@28211|Alphaproteobacteria,3JXFK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII	-	-	2.7.7.7	ko:K02346	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	IMS,IMS_C
SX1_k127_5025369_5	1297865.APJD01000005_gene4001	2.355e-52	184.0	2ABSS@1|root,31199@2|Bacteria,1N1BZ@1224|Proteobacteria,2UCJ6@28211|Alphaproteobacteria,3K0DV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5025369_3	1297865.APJD01000005_gene4000	3.526e-153	485.0	COG1028@1|root,COG1028@2|Bacteria,1R7E3@1224|Proteobacteria,2U385@28211|Alphaproteobacteria,3JUEW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_5025369_2	1297865.APJD01000005_gene3999	2.493e-164	519.0	COG1028@1|root,COG1028@2|Bacteria,1MWCY@1224|Proteobacteria,2TT44@28211|Alphaproteobacteria,3JTSG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	-	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
SX1_k127_5025474_1	1298867.AUES01000020_gene3369	9.319e-31	129.0	COG2009@1|root,COG2009@2|Bacteria,1N02N@1224|Proteobacteria,2UC47@28211|Alphaproteobacteria,3JYZ2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	succinate dehydrogenase	sdhC	-	-	ko:K00241	ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00149,M00173,M00374,M00376	R02164	RC00045	ko00000,ko00001,ko00002	-	-	-	Sdh_cyt
SX1_k127_5025474_2	172088.AUGA01000018_gene2131	3.151e-09	61.0	COG0583@1|root,COG0583@2|Bacteria,1MW16@1224|Proteobacteria,2VF1C@28211|Alphaproteobacteria,3JV45@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_5025474_0	1297865.APJD01000019_gene3228	1.178e-177	562.0	COG0730@1|root,COG0730@2|Bacteria,1R3V4@1224|Proteobacteria,2TRYX@28211|Alphaproteobacteria,3JR8R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sulfite exporter TauE/SafE	MA20_43555	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
SX1_k127_5026837_1	1297865.APJD01000007_gene2139	6.884e-262	811.0	COG2114@1|root,COG2114@2|Bacteria,1MWHK@1224|Proteobacteria,2TR2J@28211|Alphaproteobacteria,3JQNR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
SX1_k127_5026837_5	1297865.APJD01000007_gene2140	1.745e-177	557.0	COG0697@1|root,COG0697@2|Bacteria,1RFZW@1224|Proteobacteria,2TRXD@28211|Alphaproteobacteria,3JRS9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_5026837_6	1297865.APJD01000007_gene2141	2.668e-132	428.0	2AD1D@1|root,312PF@2|Bacteria,1R6TN@1224|Proteobacteria,2TT3Q@28211|Alphaproteobacteria,3JRI8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5026837_9	1297865.APJD01000007_gene2142	5.087e-59	207.0	COG2127@1|root,COG2127@2|Bacteria,1N0VF@1224|Proteobacteria,2UCNH@28211|Alphaproteobacteria,3JZDT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation	clpS	-	-	ko:K06891	-	-	-	-	ko00000	-	-	-	ClpS
SX1_k127_5026837_3	1297865.APJD01000007_gene2143	1.11e-182	572.0	COG2304@1|root,COG2304@2|Bacteria,1PH4N@1224|Proteobacteria,2TQTJ@28211|Alphaproteobacteria,3JSMW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1194)	MA20_07505	-	-	-	-	-	-	-	-	-	-	-	DUF1194
SX1_k127_5026837_4	1297865.APJD01000007_gene2144	3.136e-181	572.0	COG1708@1|root,COG1708@2|Bacteria,1N1CX@1224|Proteobacteria,2TSWE@28211|Alphaproteobacteria,3JV1W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Nucleotidyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	NTP_transf_2
SX1_k127_5026837_0	1297865.APJD01000007_gene2145	1.659e-269	833.0	COG2265@1|root,COG2265@2|Bacteria,1MV3A@1224|Proteobacteria,2TR40@28211|Alphaproteobacteria,3JT5J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family	rumA	-	2.1.1.190,2.1.1.35	ko:K00557,ko:K03215	-	-	-	-	ko00000,ko01000,ko03009,ko03016	-	-	-	tRNA_U5-meth_tr
SX1_k127_5026837_8	1101191.KI912577_gene2297	5.11e-67	238.0	COG1189@1|root,COG1189@2|Bacteria,1MWP5@1224|Proteobacteria,2TRW9@28211|Alphaproteobacteria,1JTJK@119045|Methylobacteriaceae	28211|Alphaproteobacteria	J	PFAM ribosomal RNA methyltransferase RrmJ FtsJ	tlyA	-	2.1.1.226,2.1.1.227	ko:K06442	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	FtsJ,S4
SX1_k127_5026837_7	1297865.APJD01000007_gene2147	1.568e-119	385.0	COG3613@1|root,COG3613@2|Bacteria,1N0AK@1224|Proteobacteria,2UCQW@28211|Alphaproteobacteria,3JW97@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Nucleoside 2-deoxyribosyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Nuc_deoxyrib_tr
SX1_k127_5045894_4	441620.Mpop_3096	9.456e-32	125.0	COG5639@1|root,COG5639@2|Bacteria,1N7A0@1224|Proteobacteria,2UF3R@28211|Alphaproteobacteria	28211|Alphaproteobacteria	G	conserved small protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF2274
SX1_k127_5045894_0	1297865.APJD01000035_gene5436	7.457e-260	806.0	COG2948@1|root,COG2948@2|Bacteria,1MU7U@1224|Proteobacteria,2TRRR@28211|Alphaproteobacteria,3JRQC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	PFAM conjugation TrbI family protein	-	-	-	ko:K20533	ko02024,map02024	-	-	-	ko00000,ko00001,ko02044	3.A.7.4	-	-	TrbI
SX1_k127_5045894_1	1297865.APJD01000035_gene5435	8.694e-205	653.0	COG3504@1|root,COG3504@2|Bacteria,1MVEF@1224|Proteobacteria,2TR8Y@28211|Alphaproteobacteria,3JSXS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Conjugal transfer protein trbG	-	-	-	ko:K20532	ko02024,map02024	-	-	-	ko00000,ko00001,ko02044	3.A.7.4	-	-	CagX
SX1_k127_5045894_2	1297865.APJD01000035_gene5434	2.296e-146	467.0	COG3701@1|root,COG3701@2|Bacteria,1MVUC@1224|Proteobacteria,2TRQ6@28211|Alphaproteobacteria,3JS4H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Conjugal transfer protein	-	-	-	ko:K20531	ko02024,map02024	-	-	-	ko00000,ko00001,ko02044	3.A.7.4	-	-	VirB8
SX1_k127_5045894_3	1297865.APJD01000035_gene5433	8.026e-140	447.0	COG3846@1|root,COG3846@2|Bacteria,1MVFD@1224|Proteobacteria,2TSHU@28211|Alphaproteobacteria,3JS5M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	PFAM TrbL VirB6 plasmid conjugal transfer protein	-	-	-	ko:K07344	ko02024,map02024	-	-	-	ko00000,ko00001,ko02044	3.A.7.4	-	-	TrbL
SX1_k127_504989_2	1297865.APJD01000005_gene3821	1.9e-118	380.0	COG1894@1|root,COG1894@2|Bacteria,1MV8F@1224|Proteobacteria,2TR1V@28211|Alphaproteobacteria,3JRTE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region	fdsB	-	1.6.5.3	ko:K00124,ko:K00335	ko00190,ko00630,ko00680,ko01100,ko01120,ko01200,map00190,map00630,map00680,map01100,map01120,map01200	M00144	R00519,R11945	RC00061,RC02796	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_51K,NADH_4Fe-4S,SLBB
SX1_k127_504989_0	1297865.APJD01000005_gene3820	0.0	2001.0	COG3383@1|root,COG3383@2|Bacteria,1QTZB@1224|Proteobacteria,2TVZI@28211|Alphaproteobacteria,3JTEA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Formate dehydrogenase, alpha subunit	fdsA	-	1.17.1.9	ko:K00123	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	-	R00519	RC02796	ko00000,ko00001,ko01000	-	-	-	Fer2_4,Fer4,Fer4_7,Fer4_9,Molybdop_Fe4S4,Molybdopterin,Molydop_binding,NADH-G_4Fe-4S_3
SX1_k127_504989_1	1297865.APJD01000005_gene3819	2.977e-169	533.0	COG1526@1|root,COG1526@2|Bacteria,1NRU0@1224|Proteobacteria,2TUD2@28211|Alphaproteobacteria,3JSY6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH	fdhD	-	-	ko:K02379	-	-	-	-	ko00000	-	-	-	FdhD-NarQ
SX1_k127_504989_3	1038860.AXAP01000079_gene1492	4.219e-24	105.0	2E4CR@1|root,32Z86@2|Bacteria,1N7UZ@1224|Proteobacteria,2UF9N@28211|Alphaproteobacteria,3K0B2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	NADH-dependant formate dehydrogenase delta subunit FdsD	fdsD	-	1.17.1.9	ko:K00126	ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200	-	R00519	RC02796	ko00000,ko00001,ko01000	-	-	-	FdsD
SX1_k127_5050776_0	1297865.APJD01000019_gene3112	0.0	1373.0	COG0457@1|root,COG0457@2|Bacteria	1297865.APJD01000019_gene3112|-	S	peptidyl-tyrosine sulfation	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5050776_1	1297865.APJD01000019_gene3113	0.0	1097.0	COG2199@1|root,COG5000@1|root,COG3706@2|Bacteria,COG5000@2|Bacteria,1P2K6@1224|Proteobacteria,2TRAJ@28211|Alphaproteobacteria,3JQX9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Cache domain	MA20_24860	-	-	-	-	-	-	-	-	-	-	-	GGDEF,HAMP,dCache_1
SX1_k127_5050776_7	1297865.APJD01000019_gene3114	4.807e-133	426.0	COG0325@1|root,COG0325@2|Bacteria,1MWN7@1224|Proteobacteria,2TR5Z@28211|Alphaproteobacteria,3JU8N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis	MA20_24865	GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363	-	ko:K06997	-	-	-	-	ko00000	-	-	-	Ala_racemase_N
SX1_k127_5050776_4	1297865.APJD01000019_gene3115	2.269e-167	527.0	COG3971@1|root,COG3971@2|Bacteria,1MVVV@1224|Proteobacteria,2TSWB@28211|Alphaproteobacteria,3JR57@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	2-keto-4-pentenoate hydratase	-	-	4.2.1.80	ko:K02554	ko00360,ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00360,map00362,map00621,map00622,map01100,map01120,map01220	M00545,M00569	R02601,R04781	RC00750,RC01213	br01602,ko00000,ko00001,ko00002,ko01000	-	-	-	FAA_hydrolase
SX1_k127_5050776_8	1230476.C207_02167	1.189e-112	364.0	COG3786@1|root,COG3786@2|Bacteria,1RH22@1224|Proteobacteria,2U992@28211|Alphaproteobacteria,3JY74@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	L,D-transpeptidase catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	YkuD
SX1_k127_5050776_6	172088.AUGA01000016_gene2473	7.011e-143	455.0	COG0745@1|root,COG0745@2|Bacteria,1MU3A@1224|Proteobacteria,2TR97@28211|Alphaproteobacteria,3JTWV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	transcriptional regulator, winged helix family	mtrA	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
SX1_k127_5050776_9	1297865.APJD01000019_gene3118	2.406e-82	274.0	COG0664@1|root,COG0664@2|Bacteria,1RDKD@1224|Proteobacteria,2U76S@28211|Alphaproteobacteria,3JY2I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Cyclic nucleotide-monophosphate binding domain	MA20_24885	-	-	-	-	-	-	-	-	-	-	-	cNMP_binding
SX1_k127_5050776_3	1297865.APJD01000019_gene3119	1.025e-185	580.0	COG0708@1|root,COG0708@2|Bacteria,1MVMC@1224|Proteobacteria,2TRWQ@28211|Alphaproteobacteria,3JQMZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	exodeoxyribonuclease III	xthA2	-	3.1.11.2	ko:K01142	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exo_endo_phos
SX1_k127_5050776_5	1297865.APJD01000019_gene3120	2.746e-166	527.0	COG2834@1|root,COG2834@2|Bacteria,1RA1S@1224|Proteobacteria,2U58W@28211|Alphaproteobacteria,3JR1T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)	lolA	-	-	-	-	-	-	-	-	-	-	-	LolA
SX1_k127_5050776_2	1297865.APJD01000019_gene3121	0.0	1022.0	COG1674@1|root,COG1674@2|Bacteria,1MVPI@1224|Proteobacteria,2TR48@28211|Alphaproteobacteria,3JTM7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Ftsk_gamma	ftsK	-	-	ko:K03466	-	-	-	-	ko00000,ko03036	3.A.12	-	-	FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma
SX1_k127_505371_1	1297865.APJD01000020_gene93	3.985e-195	609.0	COG2271@1|root,COG2271@2|Bacteria,1MUEK@1224|Proteobacteria,2TS60@28211|Alphaproteobacteria,3JWWC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	-	-	-	ko:K13021	-	-	-	-	ko00000,ko02000	2.A.1.14.3	-	-	MFS_1
SX1_k127_505371_0	1297865.APJD01000020_gene92	0.0	1204.0	COG3206@1|root,COG3206@2|Bacteria,1RK0N@1224|Proteobacteria,2TSFQ@28211|Alphaproteobacteria,3JS8J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Chain length determinant protein	-	-	-	-	-	-	-	-	-	-	-	-	GNVR,Wzz
SX1_k127_5057257_1	1297865.APJD01000007_gene2318	3.031e-23	98.0	COG0438@1|root,COG0438@2|Bacteria,1MWSZ@1224|Proteobacteria,2TQQK@28211|Alphaproteobacteria,3JT3F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Glycosyltransferase Family 4	MA20_17390	-	2.4.1.348	ko:K12995	-	-	-	-	ko00000,ko01000,ko01003,ko01005	-	GT4	-	Glyco_transf_4,Glycos_transf_1
SX1_k127_5057257_0	1297865.APJD01000007_gene2317	2.103e-264	816.0	COG0683@1|root,COG0683@2|Bacteria,1MWQB@1224|Proteobacteria,2VEZM@28211|Alphaproteobacteria,3K6D9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_5057257_2	1298867.AUES01000001_gene1863	6.49e-13	68.0	COG0559@1|root,COG0559@2|Bacteria,1N5XH@1224|Proteobacteria,2TSH5@28211|Alphaproteobacteria,3JS3Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	-	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_5063071_1	1297865.APJD01000003_gene6281	2.414e-170	537.0	COG3264@1|root,COG3264@2|Bacteria,1MWSA@1224|Proteobacteria,2TRKK@28211|Alphaproteobacteria,3JSMB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Mechanosensitive ion channel	MA20_40450	-	-	-	-	-	-	-	-	-	-	-	MS_channel
SX1_k127_5063071_0	1297865.APJD01000003_gene6282	8.662e-275	847.0	COG3263@1|root,COG3263@2|Bacteria,1MVKV@1224|Proteobacteria,2TSZJ@28211|Alphaproteobacteria,3JR2B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Transporter associated domain	cvrA	-	-	ko:K11105	-	-	-	-	ko00000,ko02000	2.A.36.6	-	-	CorC_HlyC,Na_H_Exchanger
SX1_k127_5066955_0	1297865.APJD01000006_gene4580	7.184e-275	845.0	COG0006@1|root,COG0006@2|Bacteria,1MUZS@1224|Proteobacteria,2TQXN@28211|Alphaproteobacteria,3JT5N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Creatinase/Prolidase N-terminal domain	pepP	-	3.4.11.9	ko:K01262	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Creatinase_N,Creatinase_N_2,Peptidase_M24,Peptidase_M24_C
SX1_k127_5066955_1	1297865.APJD01000006_gene4579	5.539e-263	811.0	COG0477@1|root,COG2814@2|Bacteria,1MW19@1224|Proteobacteria,2TRQD@28211|Alphaproteobacteria,3JSD8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	drug resistance transporter, Bcr CflA	MA20_01870	-	-	ko:K07552	-	-	-	-	ko00000,ko02000	2.A.1.2	-	-	MFS_1
SX1_k127_5067805_0	913325.N799_03855	5.477e-218	688.0	COG1450@1|root,COG1450@2|Bacteria,1MUUA@1224|Proteobacteria,1RPJS@1236|Gammaproteobacteria,1X372@135614|Xanthomonadales	135614|Xanthomonadales	NU	General secretion pathway protein	xpsD	-	-	ko:K02453	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	Secretin,Secretin_N
SX1_k127_5068899_4	1297865.APJD01000007_gene1846	2.323e-13	69.0	COG2267@1|root,COG2267@2|Bacteria,1MV7P@1224|Proteobacteria,2TSQ8@28211|Alphaproteobacteria,3JTGQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_4
SX1_k127_5068899_2	1297865.APJD01000007_gene1847	3.502e-90	299.0	COG3607@1|root,COG3607@2|Bacteria,1RH1T@1224|Proteobacteria,2U7DZ@28211|Alphaproteobacteria,3JY35@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Lactoylglutathione lyase	-	-	-	ko:K07032	-	-	-	-	ko00000	-	-	-	Glyoxalase
SX1_k127_5068899_0	1297865.APJD01000007_gene1848	5.138e-232	721.0	COG0642@1|root,COG0642@2|Bacteria,1QTSX@1224|Proteobacteria,2TWGS@28211|Alphaproteobacteria,3K5XN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA
SX1_k127_5068899_3	1297865.APJD01000007_gene1849	7.905e-33	129.0	COG0642@1|root,COG0642@2|Bacteria	2|Bacteria	T	Histidine kinase	rcsD	GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009927,GO:0009987,GO:0016020,GO:0016021,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0031224,GO:0031226,GO:0035556,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0071704,GO:0071944,GO:0140096,GO:1901564	2.7.13.3	ko:K07676	ko02020,ko02026,map02020,map02026	M00474	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA,Hpt,RcsD_ABL,Response_reg
SX1_k127_5068899_1	1230476.C207_00270	8.664e-134	427.0	COG0745@1|root,COG0745@2|Bacteria,1NCKY@1224|Proteobacteria,2TRPQ@28211|Alphaproteobacteria,3JWBM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Transcriptional regulatory protein, C terminal	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
SX1_k127_5076270_0	1297865.APJD01000007_gene1916	5.502e-311	953.0	COG1396@1|root,COG3800@1|root,COG1396@2|Bacteria,COG3800@2|Bacteria,1MU50@1224|Proteobacteria,2TRKE@28211|Alphaproteobacteria,3JS27@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	transcriptional regulator, XRE family	MA20_44725	-	-	ko:K07110	-	-	-	-	ko00000,ko03000	-	-	-	DUF2083,HTH_3,HTH_31,Peptidase_M78
SX1_k127_5076270_1	1297865.APJD01000007_gene1915	5.674e-49	175.0	2EJQP@1|root,33DFH@2|Bacteria,1N78I@1224|Proteobacteria,2UGWD@28211|Alphaproteobacteria,3K1KJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5081292_1	1297865.APJD01000033_gene7021	8.291e-171	537.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JSCZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme	acsf	-	-	ko:K00666	-	-	-	-	ko00000,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_5081292_5	258594.RPA0628	1.117e-06	52.0	COG3409@1|root,COG5480@1|root,COG3409@2|Bacteria,COG5480@2|Bacteria,1P9ZA@1224|Proteobacteria,2TSTF@28211|Alphaproteobacteria,3JVQW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Protein of unknown function (DUF1036)	MA20_21840	-	-	-	-	-	-	-	-	-	-	-	DUF1036,PG_binding_1
SX1_k127_5081292_0	1297865.APJD01000033_gene7020	2.351e-266	822.0	COG1680@1|root,COG1680@2|Bacteria,1MVPR@1224|Proteobacteria,2TRWZ@28211|Alphaproteobacteria,3JV8N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase,DUF3471
SX1_k127_5081292_3	1297865.APJD01000033_gene7019	1.814e-65	224.0	2ENEC@1|root,33G1V@2|Bacteria,1RDM6@1224|Proteobacteria,2U7B6@28211|Alphaproteobacteria,3JZ0W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_23800	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5081292_2	1297865.APJD01000033_gene7018	3.795e-85	286.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,3JSVT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde dehydrogenase	gabD	GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0004777,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006105,GO:0006520,GO:0006536,GO:0006538,GO:0006540,GO:0006807,GO:0008150,GO:0008152,GO:0009013,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009448,GO:0009450,GO:0009987,GO:0016054,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0019752,GO:0032787,GO:0036094,GO:0042133,GO:0042135,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606	1.2.1.16,1.2.1.20,1.2.1.79	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	M00027	R00713,R00714,R02401	RC00080	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
SX1_k127_5082338_1	1297865.APJD01000028_gene5230	8.205e-230	711.0	COG1804@1|root,COG1804@2|Bacteria,1MU2K@1224|Proteobacteria,2TR7Q@28211|Alphaproteobacteria,3JQQD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA-transferase family III	MA20_24210	-	2.8.3.16	ko:K07749	-	-	-	-	ko00000,ko01000	-	-	-	CoA_transf_3
SX1_k127_5082338_0	1230476.C207_02263	6.785e-285	876.0	COG1653@1|root,COG1653@2|Bacteria,1MVMW@1224|Proteobacteria,2TQKV@28211|Alphaproteobacteria,3JRS3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Bacterial extracellular solute-binding protein	ugpB	-	-	ko:K05813	ko02010,map02010	M00198	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.3	-	-	SBP_bac_8
SX1_k127_5087437_4	1297865.APJD01000001_gene5878	1.185e-157	497.0	COG1944@1|root,COG1944@2|Bacteria,1N5NV@1224|Proteobacteria,2U1QX@28211|Alphaproteobacteria,3JSQD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	YcaO cyclodehydratase, ATP-ad Mg2+-binding	-	-	-	ko:K09136	-	-	-	-	ko00000,ko03009	-	-	-	YcaO
SX1_k127_5087437_1	1297865.APJD01000001_gene5879	8e-323	988.0	COG0778@1|root,COG0778@2|Bacteria,1PUI1@1224|Proteobacteria,2U13C@28211|Alphaproteobacteria,3JU53@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Nitroreductase family	-	-	-	-	-	-	-	-	-	-	-	-	Nitroreductase
SX1_k127_5087437_0	1297865.APJD01000001_gene5880	0.0	1251.0	COG2192@1|root,COG2192@2|Bacteria,1MWBA@1224|Proteobacteria,2TV6G@28211|Alphaproteobacteria,3JR7Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	symbiont process	-	-	-	ko:K00612	-	-	-	-	ko00000,ko01000	-	-	-	Carbam_trans_C,Carbam_trans_N
SX1_k127_5087437_5	1230476.C207_01430	2.331e-45	165.0	2AEF9@1|root,314AA@2|Bacteria,1N9NG@1224|Proteobacteria,2UITK@28211|Alphaproteobacteria,3K0ZE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5087437_3	1297865.APJD01000001_gene5882	7.24e-179	565.0	COG1878@1|root,COG1878@2|Bacteria,1MV8S@1224|Proteobacteria,2TSUJ@28211|Alphaproteobacteria,3JR5M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative cyclase	-	-	-	-	-	-	-	-	-	-	-	-	Cyclase
SX1_k127_5087437_2	1297865.APJD01000001_gene5883	3.744e-215	668.0	COG0457@1|root,COG3914@1|root,COG0457@2|Bacteria,COG3914@2|Bacteria,1MVMG@1224|Proteobacteria,2TRVB@28211|Alphaproteobacteria,3JR8N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_41,Methyltransf_23,TPR_1,TPR_11,TPR_16,TPR_2,TPR_8
SX1_k127_5088190_1	1297865.APJD01000021_gene3040	9.776e-154	485.0	COG0179@1|root,COG0179@2|Bacteria,1MW82@1224|Proteobacteria,2TRKH@28211|Alphaproteobacteria,3JT4J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Fumarylacetoacetase N-terminal	fahA	-	3.7.1.2	ko:K01555	ko00350,ko00643,ko01100,ko01120,map00350,map00643,map01100,map01120	M00044	R01364	RC00326,RC00446	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	FAA_hydrolase,FAA_hydrolase_N
SX1_k127_5088190_3	1297865.APJD01000021_gene3039	2.967e-68	232.0	COG3813@1|root,COG3813@2|Bacteria,1N712@1224|Proteobacteria,2UFME@28211|Alphaproteobacteria,3JZWV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1272)	MA20_39405	-	-	ko:K09984	-	-	-	-	ko00000	-	-	-	DUF1272
SX1_k127_5088190_2	1297865.APJD01000021_gene3038	2.254e-95	312.0	COG1522@1|root,COG1522@2|Bacteria,1QW36@1224|Proteobacteria,2U0QX@28211|Alphaproteobacteria,3JU60@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix ASNC type	-	-	-	-	-	-	-	-	-	-	-	-	AsnC_trans_reg,HTH_24,HTH_AsnC-type
SX1_k127_5088190_0	1297865.APJD01000021_gene3037	4.315e-246	761.0	COG3185@1|root,COG3185@2|Bacteria,1MUVZ@1224|Proteobacteria,2TRCC@28211|Alphaproteobacteria,3JRTH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal	hppD	GO:0001897,GO:0001906,GO:0001907,GO:0003674,GO:0003824,GO:0003868,GO:0006082,GO:0006520,GO:0006570,GO:0006572,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009987,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019752,GO:0019835,GO:0019836,GO:0031640,GO:0035821,GO:0043436,GO:0044003,GO:0044004,GO:0044179,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044364,GO:0044403,GO:0044419,GO:0044764,GO:0046395,GO:0051213,GO:0051701,GO:0051704,GO:0051715,GO:0051801,GO:0051817,GO:0051818,GO:0051883,GO:0052331,GO:0055114,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606	1.13.11.27	ko:K00457	ko00130,ko00350,ko00360,ko01100,map00130,map00350,map00360,map01100	M00044	R01372,R02521	RC00505,RC00738	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Glyoxalase,Glyoxalase_5
SX1_k127_5092779_0	1197906.CAJQ02000055_gene4066	1.299e-136	438.0	COG3704@1|root,COG3704@2|Bacteria,1R71U@1224|Proteobacteria,2U4ZX@28211|Alphaproteobacteria,3JVZ6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	TrbL/VirB6 plasmid conjugal transfer protein	virB6	-	-	ko:K03201	ko03070,map03070	M00333	-	-	ko00000,ko00001,ko00002,ko02044	3.A.7	-	-	TrbL
SX1_k127_5092779_4	1197906.CAJQ02000055_gene4067	3.4e-28	115.0	29UZT@1|root,30GCU@2|Bacteria,1P8X7@1224|Proteobacteria,2UY0Z@28211|Alphaproteobacteria,3K5E2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5092779_1	1197906.CAJQ02000055_gene4069	1.052e-122	396.0	29I1K@1|root,304YP@2|Bacteria,1RG48@1224|Proteobacteria,2U0N8@28211|Alphaproteobacteria,3JUBT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Type IV secretion system proteins	-	-	-	-	-	-	-	-	-	-	-	-	T4SS
SX1_k127_5092779_2	504832.OCAR_7696	5.036e-114	375.0	2FGDE@1|root,3489K@2|Bacteria,1R96B@1224|Proteobacteria,2U4A7@28211|Alphaproteobacteria,3JWDC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5092779_3	1197906.CAJQ02000056_gene3665	2.163e-68	232.0	COG3451@1|root,COG3451@2|Bacteria,1MXH0@1224|Proteobacteria,2TR1U@28211|Alphaproteobacteria,3JRFT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	component of type IV transporter system	virB4	-	-	ko:K03199	ko03070,map03070	M00333	-	-	ko00000,ko00001,ko00002,ko02044	3.A.7	-	-	CagE_TrbE_VirB
SX1_k127_5094224_3	1297865.APJD01000005_gene3810	4.109e-230	714.0	COG4235@1|root,COG4235@2|Bacteria,1MY4J@1224|Proteobacteria,2TSI7@28211|Alphaproteobacteria,3JT3X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Cytochrome c-type biogenesis protein	cycH	-	-	ko:K02200	-	-	-	-	ko00000	-	-	-	TPR_16,TPR_19
SX1_k127_5094224_5	1297865.APJD01000005_gene3811	3.945e-94	311.0	COG2332@1|root,COG2332@2|Bacteria,1RHN5@1224|Proteobacteria,2U99J@28211|Alphaproteobacteria,3JYFM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH	ccmE	GO:0003674,GO:0003824,GO:0008150,GO:0009987,GO:0016043,GO:0017004,GO:0022607,GO:0034622,GO:0043933,GO:0044085,GO:0065003,GO:0071840	-	ko:K02197	-	-	-	-	ko00000	-	-	-	CcmE
SX1_k127_5094224_0	1297865.APJD01000005_gene3812	0.0	1301.0	COG1138@1|root,COG1138@2|Bacteria,1MUQS@1224|Proteobacteria,2TRNG@28211|Alphaproteobacteria,3JRX0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Cytochrome c-type biogenesis protein	ccmF	-	-	ko:K02198	-	-	-	-	ko00000,ko02000	9.B.14.1	-	-	CcmF_C,Cytochrom_C_asm
SX1_k127_5094224_6	1297865.APJD01000005_gene3813	1.876e-90	325.0	COG3088@1|root,COG3088@2|Bacteria,1MZZ5@1224|Proteobacteria,2U96P@28211|Alphaproteobacteria,3JYWC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	subunit of a heme lyase	cycL	-	-	ko:K02200	-	-	-	-	ko00000	-	-	-	CcmH
SX1_k127_5094224_1	1297865.APJD01000005_gene3814	0.0	1025.0	COG0265@1|root,COG0265@2|Bacteria,1MU63@1224|Proteobacteria,2TQPZ@28211|Alphaproteobacteria,3JQQI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Belongs to the peptidase S1C family	MA20_15480	-	3.4.21.107	ko:K04771	ko01503,ko02020,map01503,map02020	M00728	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	-	-	-	PDZ_2,Trypsin_2
SX1_k127_5094224_4	1230476.C207_01824	6.816e-146	468.0	COG0745@1|root,COG0745@2|Bacteria,1MU67@1224|Proteobacteria,2TRTZ@28211|Alphaproteobacteria,3JT22@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	transcriptional regulator, winged helix family	ragA	GO:0000160,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005515,GO:0006355,GO:0007154,GO:0007165,GO:0008150,GO:0009889,GO:0009893,GO:0009987,GO:0010035,GO:0010038,GO:0010468,GO:0010556,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0023052,GO:0031323,GO:0031326,GO:0035556,GO:0042221,GO:0042802,GO:0046688,GO:0048518,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
SX1_k127_5094224_2	1297865.APJD01000005_gene3816	1.271e-307	944.0	COG0642@1|root,COG0642@2|Bacteria,1QTVA@1224|Proteobacteria,2U5EI@28211|Alphaproteobacteria,3JRC5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain	MA20_15235	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
SX1_k127_5094224_7	1297865.APJD01000005_gene3817	5.277e-49	175.0	COG1391@1|root,COG1391@2|Bacteria,1MU4I@1224|Proteobacteria,2TRY7@28211|Alphaproteobacteria,3JR47@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell	glnE	GO:0000820,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006521,GO:0008150,GO:0008882,GO:0010565,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0031323,GO:0033238,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0062012,GO:0065007,GO:0070566,GO:0080090	2.7.7.42,2.7.7.89	ko:K00982	-	-	-	-	ko00000,ko01000	-	-	-	GlnD_UR_UTase,GlnE
SX1_k127_5096471_4	172088.AUGA01000022_gene599	3.312e-177	561.0	COG0477@1|root,COG2814@2|Bacteria,1MU9G@1224|Proteobacteria,2TSPI@28211|Alphaproteobacteria,3JU62@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	araJ	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K19577	-	-	-	-	ko00000,ko02000	2.A.1.2.65	-	-	MFS_1,Sugar_tr
SX1_k127_5096471_5	1297865.APJD01000026_gene2454	1.81e-149	477.0	COG5342@1|root,COG5342@2|Bacteria,1MV8Y@1224|Proteobacteria,2TS6A@28211|Alphaproteobacteria,3JRJC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Invasion associated locus B	MA20_13025	-	-	-	-	-	-	-	-	-	-	-	IalB
SX1_k127_5096471_0	1297865.APJD01000026_gene2453	0.0	1237.0	COG4166@1|root,COG4166@2|Bacteria,1MUVU@1224|Proteobacteria,2TQJX@28211|Alphaproteobacteria,3JT9M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Bacterial extracellular solute-binding proteins, family 5 Middle	nikA	-	-	ko:K02035	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	SBP_bac_5
SX1_k127_5096471_1	1297865.APJD01000026_gene2452	0.0	997.0	COG0318@1|root,COG0318@2|Bacteria,1MV6U@1224|Proteobacteria,2TT3F@28211|Alphaproteobacteria,3JSPA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme	MA20_13015	-	-	-	-	-	-	-	-	-	-	-	AMP-binding
SX1_k127_5096471_2	1297865.APJD01000026_gene2451	1.97e-247	766.0	COG2199@1|root,COG3706@2|Bacteria,1N16G@1224|Proteobacteria,2U0J6@28211|Alphaproteobacteria,3JV7S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	GGDEF domain	MA20_13010	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5096471_3	1297865.APJD01000026_gene2449	1.431e-227	705.0	COG1197@1|root,COG1197@2|Bacteria,1MUXG@1224|Proteobacteria,2TR2H@28211|Alphaproteobacteria,3JU46@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site	mfd	-	-	ko:K03723	ko03420,map03420	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	CarD_CdnL_TRCF,DEAD,Helicase_C,TRCF
SX1_k127_5096545_2	1297865.APJD01000015_gene3438	6.046e-121	391.0	COG2373@1|root,COG3210@1|root,COG4932@1|root,COG2373@2|Bacteria,COG3210@2|Bacteria,COG4932@2|Bacteria,1QUUN@1224|Proteobacteria,2TX9V@28211|Alphaproteobacteria,3K64F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	MU	Bacterial Ig-like domain (group 3)	-	-	-	-	-	-	-	-	-	-	-	-	Big_3_3,PATR
SX1_k127_5096545_1	1297865.APJD01000015_gene3437	1.802e-148	475.0	COG1525@1|root,COG1525@2|Bacteria,1R3VA@1224|Proteobacteria,2U0NK@28211|Alphaproteobacteria,3JRDT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Staphylococcal nuclease homologue	-	-	-	-	-	-	-	-	-	-	-	-	SNase
SX1_k127_5096545_0	1297865.APJD01000015_gene3436	1.586e-321	985.0	COG4784@1|root,COG4784@2|Bacteria,1QTT7@1224|Proteobacteria,2TTU7@28211|Alphaproteobacteria,3JSNB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Peptidase family M48	MA20_40030	-	-	-	-	-	-	-	-	-	-	-	LysM,Peptidase_M48
SX1_k127_5101496_4	1230476.C207_06083	2.252e-74	253.0	COG1629@1|root,COG4771@2|Bacteria,1MX42@1224|Proteobacteria,2TR9M@28211|Alphaproteobacteria,3JSUY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TonB dependent receptor	-	-	-	ko:K16087	-	-	-	-	ko00000,ko02000	1.B.14.2	-	-	Plug,TonB_dep_Rec
SX1_k127_5101496_5	1297865.APJD01000018_gene5630	2.619e-33	130.0	COG4256@1|root,COG4256@2|Bacteria,1NGJH@1224|Proteobacteria,2UJIR@28211|Alphaproteobacteria,3K1RA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Hemin uptake protein hemP	MA20_03590	-	-	-	-	-	-	-	-	-	-	-	hemP
SX1_k127_5101496_2	1297865.APJD01000018_gene5629	5.883e-189	600.0	COG4558@1|root,COG4558@2|Bacteria,1QTSV@1224|Proteobacteria,2TTU9@28211|Alphaproteobacteria,3JRBR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Periplasmic binding protein	hmuT	-	-	ko:K02016	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	Peripla_BP_2
SX1_k127_5101496_0	1297865.APJD01000018_gene5628	8.113e-208	654.0	COG0609@1|root,COG0609@2|Bacteria,1MV9W@1224|Proteobacteria,2TR9A@28211|Alphaproteobacteria,3JRWV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	hmuU	-	-	ko:K02015	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.14	-	-	FecCD
SX1_k127_5101496_3	1297865.APJD01000018_gene5627	3.395e-161	525.0	COG4559@1|root,COG4559@2|Bacteria,1RD7N@1224|Proteobacteria,2TTTR@28211|Alphaproteobacteria,3JV7V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system	hmuV	-	3.6.3.34	ko:K02013	ko02010,map02010	M00240	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.14	-	-	ABC_tran
SX1_k127_5101496_1	1297865.APJD01000018_gene5626	1.154e-198	619.0	COG4222@1|root,COG4222@2|Bacteria,1N0B0@1224|Proteobacteria,2TT18@28211|Alphaproteobacteria,3JTV6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Esterase-like activity of phytase	MA20_03555	-	-	-	-	-	-	-	-	-	-	-	Phytase-like
SX1_k127_5103235_2	1297865.APJD01000049_gene5501	4.339e-85	285.0	COG1846@1|root,COG1846@2|Bacteria,1N7G0@1224|Proteobacteria,2UA2S@28211|Alphaproteobacteria,3JY2Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SX1_k127_5103235_0	1297865.APJD01000049_gene5502	1.447e-250	774.0	COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,2TQQ7@28211|Alphaproteobacteria,3JR1V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the thiolase family	MA20_05130	-	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
SX1_k127_5103235_1	1297865.APJD01000049_gene5503	1.914e-147	467.0	COG0583@1|root,COG0583@2|Bacteria,1MUWX@1224|Proteobacteria,2TU0X@28211|Alphaproteobacteria,3JVPS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_5104180_0	1297865.APJD01000036_gene1444	1.433e-190	599.0	COG2025@1|root,COG2025@2|Bacteria,1MUFI@1224|Proteobacteria,2TR10@28211|Alphaproteobacteria,3JRD2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Electron transfer flavoprotein	etfA	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575	-	ko:K03522	-	-	-	-	ko00000,ko04147	-	-	-	ETF,ETF_alpha
SX1_k127_5104180_1	1297865.APJD01000036_gene1443	3.429e-151	479.0	COG2086@1|root,COG2086@2|Bacteria,1MVH6@1224|Proteobacteria,2TR4J@28211|Alphaproteobacteria,3JS7W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Electron transfer flavoprotein	etfB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114	-	ko:K03521	-	-	-	-	ko00000	-	-	-	ETF
SX1_k127_5104180_2	1297865.APJD01000036_gene1442	7.193e-52	183.0	COG2096@1|root,COG2096@2|Bacteria,1RDUF@1224|Proteobacteria,2U5J1@28211|Alphaproteobacteria,3JS3E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Cobalamin adenosyltransferase	MA20_20540	-	2.5.1.17	ko:K00798	ko00860,ko01100,map00860,map01100	M00122	R01492,R05220,R07268	RC00533	ko00000,ko00001,ko00002,ko01000	-	-	-	Cob_adeno_trans
SX1_k127_5105855_1	1297865.APJD01000023_gene1143	2.043e-49	177.0	COG3798@1|root,COG3798@2|Bacteria,1N2FJ@1224|Proteobacteria,2UC84@28211|Alphaproteobacteria,3K024@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized protein conserved in bacteria (DUF2171)	MA20_37705	-	-	-	-	-	-	-	-	-	-	-	DUF2171
SX1_k127_5105855_0	1297865.APJD01000023_gene1142	0.0	1402.0	COG0542@1|root,COG0542@2|Bacteria,1MURH@1224|Proteobacteria,2TRKI@28211|Alphaproteobacteria,3JRD0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE	clpB	-	-	ko:K03695	ko04213,map04213	-	-	-	ko00000,ko00001,ko03110	-	-	-	AAA,AAA_2,ClpB_D2-small,Clp_N
SX1_k127_5112071_0	1297865.APJD01000005_gene3687	0.0	2133.0	COG0587@1|root,COG0587@2|Bacteria,1MUE4@1224|Proteobacteria,2TRUB@28211|Alphaproteobacteria,3JUU5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase	dnaE2	GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496	2.7.7.7	ko:K02337,ko:K14162	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400	-	-	-	DNA_pol3_alpha,HHH_6,PHP,tRNA_anti-codon
SX1_k127_5112071_5	316056.RPC_4081	1.973e-86	292.0	COG1943@1|root,COG1943@2|Bacteria,1RCWW@1224|Proteobacteria,2U5BB@28211|Alphaproteobacteria,3JY75@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Transposase IS200 like	-	-	-	ko:K07491	-	-	-	-	ko00000	-	-	-	Y1_Tnp
SX1_k127_5112071_4	1297865.APJD01000005_gene3688	1.005e-108	356.0	COG3193@1|root,COG3193@2|Bacteria,1R6E7@1224|Proteobacteria,2VG7T@28211|Alphaproteobacteria,3JW8C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Haem-degrading	-	-	-	-	-	-	-	-	-	-	-	-	Haem_degrading
SX1_k127_5112071_2	1297865.APJD01000005_gene3689	1.771e-128	412.0	2BPPV@1|root,32IH2@2|Bacteria,1NFYU@1224|Proteobacteria,2UIKJ@28211|Alphaproteobacteria,3K4IG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5112071_6	1297865.APJD01000005_gene3690	1.247e-52	187.0	2CMAN@1|root,32SE6@2|Bacteria,1RIK0@1224|Proteobacteria,2U9U4@28211|Alphaproteobacteria,3JZGB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_15930	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5112071_1	1297865.APJD01000005_gene3691	1.877e-313	960.0	COG1804@1|root,COG1804@2|Bacteria,1MU2K@1224|Proteobacteria,2TT4A@28211|Alphaproteobacteria,3JU8B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA-transferase family III	-	-	-	-	-	-	-	-	-	-	-	-	CoA_transf_3
SX1_k127_5112071_3	1297865.APJD01000005_gene3692	5.004e-122	393.0	COG0845@1|root,COG0845@2|Bacteria,1MVAS@1224|Proteobacteria,2TUDB@28211|Alphaproteobacteria,3JSKM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	MA20_15920	-	-	ko:K15727	-	-	-	-	ko00000,ko02000	8.A.1.2.1	-	-	HlyD_D23
SX1_k127_5112140_4	1297865.APJD01000020_gene188	1.907e-177	556.0	COG4772@1|root,COG4772@2|Bacteria,1MUIH@1224|Proteobacteria,2TRPJ@28211|Alphaproteobacteria,3JRAT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TonB-dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SX1_k127_5112140_2	1297865.APJD01000020_gene189	2.618e-268	833.0	COG4409@1|root,COG4409@2|Bacteria,1MVUD@1224|Proteobacteria,2TRQQ@28211|Alphaproteobacteria,3JRHA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	exo-alpha-(2->6)-sialidase activity	-	-	-	-	-	-	-	-	-	-	-	-	BNR_2
SX1_k127_5112140_8	1297865.APJD01000020_gene190	1.095e-106	347.0	COG0526@1|root,COG0526@2|Bacteria,1MZ9B@1224|Proteobacteria,2U6Q1@28211|Alphaproteobacteria,3JZ47@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CO	COG0526 Thiol-disulfide isomerase and thioredoxins	MA20_37405	-	-	-	-	-	-	-	-	-	-	-	Redoxin,Thioredoxin
SX1_k127_5112140_7	1297865.APJD01000020_gene191	6.647e-107	347.0	COG2847@1|root,COG2847@2|Bacteria,1MZ3M@1224|Proteobacteria,2UBUR@28211|Alphaproteobacteria,3JX1P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Copper chaperone PCu(A)C	-	-	-	ko:K09796	-	-	-	-	ko00000,ko03110	-	-	-	PCuAC
SX1_k127_5112140_6	1297865.APJD01000020_gene192	2.532e-112	362.0	COG4549@1|root,COG4549@2|Bacteria,1RGDY@1224|Proteobacteria,2VGUA@28211|Alphaproteobacteria,3JRBK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unkown function (DUF1775)	-	-	-	ko:K09796	-	-	-	-	ko00000,ko03110	-	-	-	DUF1775
SX1_k127_5112140_0	1297865.APJD01000020_gene193	4.74e-321	987.0	COG1276@1|root,COG2372@1|root,COG1276@2|Bacteria,COG2372@2|Bacteria,1MXGC@1224|Proteobacteria,2TVGX@28211|Alphaproteobacteria,3JS3T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	CopC domain	ycnJ	-	-	ko:K07245,ko:K14166	-	-	-	-	ko00000,ko02000	9.B.62.1	-	-	CopC,CopD
SX1_k127_5112140_1	1230476.C207_00874	5.043e-289	887.0	COG0442@1|root,COG0442@2|Bacteria,1MU7E@1224|Proteobacteria,2TQQ4@28211|Alphaproteobacteria,3JUUQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro)	proS	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	6.1.1.15	ko:K01881	ko00970,map00970	M00359,M00360	R03661	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	HGTP_anticodon,tRNA-synt_2b
SX1_k127_5112140_3	1297865.APJD01000020_gene195	1.202e-267	826.0	COG4591@1|root,COG4591@2|Bacteria,1MVV7@1224|Proteobacteria,2TRBX@28211|Alphaproteobacteria,3JUG9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	lipoprotein releasing system, transmembrane protein, LolC E family	lolC	-	-	ko:K09808	ko02010,map02010	M00255	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.125	-	-	FtsX,MacB_PCD
SX1_k127_5112140_5	1297865.APJD01000020_gene196	8.166e-144	456.0	COG1136@1|root,COG1136@2|Bacteria,1MVSQ@1224|Proteobacteria,2TSBE@28211|Alphaproteobacteria,3JT8M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Part of the ABC transporter complex LolCDE involved in the translocation of	lolD	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006807,GO:0006810,GO:0008104,GO:0008150,GO:0008152,GO:0015031,GO:0015399,GO:0015405,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0022804,GO:0022857,GO:0031224,GO:0032991,GO:0033036,GO:0042157,GO:0042160,GO:0042623,GO:0042626,GO:0042886,GO:0042953,GO:0043170,GO:0043190,GO:0043492,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901564,GO:1902494,GO:1902495,GO:1904949,GO:1990351	-	ko:K09810	ko02010,map02010	M00255	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.125	-	-	ABC_tran
SX1_k127_5112140_10	1297865.APJD01000020_gene197	2.263e-54	190.0	2AEXE@1|root,314V4@2|Bacteria,1NBQG@1224|Proteobacteria,2UG8Z@28211|Alphaproteobacteria,3K0YW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3551)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3551
SX1_k127_5112140_9	1297865.APJD01000020_gene198	1.175e-58	209.0	2AITW@1|root,314K9@2|Bacteria,1NANS@1224|Proteobacteria,2UIEJ@28211|Alphaproteobacteria,3K184@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3551)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3551
SX1_k127_5112140_11	1230476.C207_00879	5.535e-53	190.0	COG3637@1|root,COG3637@2|Bacteria,1R6TJ@1224|Proteobacteria,2TTKC@28211|Alphaproteobacteria,3JUCD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	OmpA-like transmembrane domain	-	-	-	ko:K16079	-	-	-	-	ko00000,ko02000	1.B.4.2.1	-	-	OMP_b-brl
SX1_k127_5112567_3	172088.AUGA01000025_gene462	3.895e-60	208.0	COG0624@1|root,COG0624@2|Bacteria,1MW2W@1224|Proteobacteria,2TQYZ@28211|Alphaproteobacteria,3JRQD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Peptidase dimerisation domain	MA20_28495	-	3.5.1.16	ko:K01438	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	M00028,M00845	R00669,R09107	RC00064,RC00300	ko00000,ko00001,ko00002,ko01000	-	-	-	M20_dimer,Peptidase_M20
SX1_k127_5112567_1	398525.KB900701_gene4574	1.032e-152	486.0	COG3467@1|root,COG3467@2|Bacteria,1MWQE@1224|Proteobacteria,2TR7J@28211|Alphaproteobacteria,3JVXP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Pyridoxamine 5'-phosphate oxidase	MA20_28490	-	-	ko:K07005	-	-	-	-	ko00000	-	-	-	Pyridox_ox_2
SX1_k127_5112567_0	1297865.APJD01000010_gene5113	6.302e-320	982.0	COG1167@1|root,COG1167@2|Bacteria,1MVGT@1224|Proteobacteria,2TRK7@28211|Alphaproteobacteria,3JQR8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix gluconate operon transcriptional repressor	-	-	-	ko:K00375	-	-	-	-	ko00000,ko03000	-	-	-	Aminotran_1_2,GntR
SX1_k127_5112567_4	1297865.APJD01000010_gene5112	1.952e-24	103.0	2BQR4@1|root,32JMR@2|Bacteria,1N6WJ@1224|Proteobacteria,2UFIB@28211|Alphaproteobacteria,3K0WZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5112567_5	1297865.APJD01000010_gene5111	1.868e-22	102.0	2AE7W@1|root,3141W@2|Bacteria,1N8XU@1224|Proteobacteria,2UFAI@28211|Alphaproteobacteria,3K138@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5112567_2	1297865.APJD01000010_gene5110	4.035e-76	256.0	2BTPH@1|root,32NWI@2|Bacteria,1RE8E@1224|Proteobacteria,2U829@28211|Alphaproteobacteria,3JZ43@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5112567_6	1297865.APJD01000010_gene5109	9.451e-22	94.0	29EP4@1|root,301M0@2|Bacteria,1N8TY@1224|Proteobacteria,2UGVR@28211|Alphaproteobacteria,3K183@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5116399_0	1297865.APJD01000011_gene6734	2.119e-271	836.0	COG0683@1|root,COG0683@2|Bacteria,1MVQX@1224|Proteobacteria,2TUJW@28211|Alphaproteobacteria,3JTJV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	MA20_22055	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_5132791_2	1297865.APJD01000006_gene4731	1.905e-106	345.0	COG5501@1|root,COG5501@2|Bacteria,1PB0I@1224|Proteobacteria,2TR7M@28211|Alphaproteobacteria,3JVW1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sulfur oxidation protein SoxY	MA20_34470	-	-	ko:K17226	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00595	R10151	RC03151,RC03152	ko00000,ko00001,ko00002	-	-	-	SoxY,SoxZ
SX1_k127_5132791_4	1230476.C207_04783	3.606e-61	213.0	2C7YM@1|root,32RK3@2|Bacteria,1N2IQ@1224|Proteobacteria,2UC0T@28211|Alphaproteobacteria,3JZNE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5132791_0	1297865.APJD01000006_gene4729	1.055e-200	627.0	COG0715@1|root,COG0715@2|Bacteria,1MWUA@1224|Proteobacteria,2TRS0@28211|Alphaproteobacteria,3JTSE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NMT1/THI5 like	-	-	-	ko:K02051	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	NMT1
SX1_k127_5132791_3	622637.KE124774_gene4000	1.276e-83	301.0	COG0600@1|root,COG0600@2|Bacteria,1MWS0@1224|Proteobacteria,2TR0G@28211|Alphaproteobacteria,36Y0P@31993|Methylocystaceae	28211|Alphaproteobacteria	P	Binding-protein-dependent transport system inner membrane component	MA20_34455	-	-	ko:K02050	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	BPD_transp_1
SX1_k127_5132791_1	1297865.APJD01000006_gene4727	3.279e-148	469.0	COG1116@1|root,COG1116@2|Bacteria,1MU6C@1224|Proteobacteria,2TS5F@28211|Alphaproteobacteria,3JUER@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ATPases associated with a variety of cellular activities	-	-	-	ko:K02049	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	ABC_tran
SX1_k127_5137745_5	1205680.CAKO01000038_gene1652	4.899e-177	558.0	COG2070@1|root,COG2070@2|Bacteria,1MWPC@1224|Proteobacteria,2TQRT@28211|Alphaproteobacteria,2JPRU@204441|Rhodospirillales	204441|Rhodospirillales	S	2-nitropropane dioxygenase	-	-	1.13.12.16	ko:K00459	ko00910,map00910	-	R00025	RC02541,RC02759	ko00000,ko00001,ko01000	-	-	-	NMO
SX1_k127_5137745_2	1297865.APJD01000023_gene1162	7.083e-247	766.0	COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,2TQQ7@28211|Alphaproteobacteria,3JR1V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the thiolase family	vraB	-	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
SX1_k127_5137745_3	1297865.APJD01000023_gene1163	3.432e-235	733.0	COG1960@1|root,COG1960@2|Bacteria,1MUBH@1224|Proteobacteria,2TSKH@28211|Alphaproteobacteria,3JSA4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, middle domain	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_5137745_1	1297865.APJD01000023_gene1164	1.127e-267	823.0	COG1960@1|root,COG1960@2|Bacteria,1MVJC@1224|Proteobacteria,2TQRA@28211|Alphaproteobacteria,3JV5Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, middle domain	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_5137745_6	1297865.APJD01000023_gene1165	4.002e-157	497.0	COG1028@1|root,COG1028@2|Bacteria,1MWJQ@1224|Proteobacteria,2TVRP@28211|Alphaproteobacteria,3JSWP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	short chain dehydrogenase	MA20_07325	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_5137745_0	1297865.APJD01000023_gene1166	0.0	1015.0	COG0318@1|root,COG0318@2|Bacteria,1MXWG@1224|Proteobacteria,2TTYZ@28211|Alphaproteobacteria,3JU0G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_5137745_7	1297865.APJD01000023_gene1167	2.224e-136	435.0	COG3917@1|root,COG3917@2|Bacteria,1RA6I@1224|Proteobacteria,2U5JB@28211|Alphaproteobacteria,3JRJN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	DSBA-like thioredoxin domain	dsbA	-	5.99.1.4	ko:K14584	ko00626,ko01100,ko01120,ko01220,map00626,map01100,map01120,map01220	M00534	R05137	RC03084	br01602,ko00000,ko00001,ko00002,ko01000	-	-	-	DSBA
SX1_k127_5137745_8	1297865.APJD01000023_gene1168	6.96e-111	359.0	COG1733@1|root,COG1733@2|Bacteria,1RF0R@1224|Proteobacteria,2U1VF@28211|Alphaproteobacteria,3JWK8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	HxlR-like helix-turn-helix	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
SX1_k127_5137745_4	1297865.APJD01000023_gene1169	4.332e-230	713.0	COG2267@1|root,COG2267@2|Bacteria,1MZG8@1224|Proteobacteria,2TUWZ@28211|Alphaproteobacteria,3JUFG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Serine aminopeptidase, S33	-	-	3.4.11.5	ko:K01259	ko00330,map00330	-	R00135	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Abhydrolase_1,Abhydrolase_6
SX1_k127_5137745_9	1297865.APJD01000023_gene1170	3.286e-110	355.0	COG0243@1|root,COG0243@2|Bacteria,1NR6J@1224|Proteobacteria,2TSAP@28211|Alphaproteobacteria,3JUM4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family	MA20_34055	-	-	ko:K08351	ko00780,ko01100,map00780,map01100	-	R10127	RC03056	ko00000,ko00001,ko01000,ko02000	5.A.3.4	-	-	Molybdopterin,Molydop_binding
SX1_k127_5143778_10	1297865.APJD01000003_gene6228	4.161e-148	471.0	COG0810@1|root,COG0810@2|Bacteria,1RFKM@1224|Proteobacteria,2U7UJ@28211|Alphaproteobacteria,3JYXU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Gram-negative bacterial TonB protein C-terminal	-	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_C
SX1_k127_5143778_12	1297865.APJD01000003_gene6227	4.317e-138	461.0	COG4773@1|root,COG4773@2|Bacteria,1RBQP@1224|Proteobacteria,2U5YA@28211|Alphaproteobacteria,3JY34@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Secretin and TonB N terminus short domain	-	-	-	-	-	-	-	-	-	-	-	-	STN,TonB_2
SX1_k127_5143778_11	1297865.APJD01000003_gene6226	7.286e-146	464.0	COG1309@1|root,COG1309@2|Bacteria,1RCC8@1224|Proteobacteria,2U0CX@28211|Alphaproteobacteria,3JXIK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_5143778_9	1297865.APJD01000003_gene6225	4.069e-190	599.0	COG1172@1|root,COG1172@2|Bacteria,1MX7D@1224|Proteobacteria,2TRYA@28211|Alphaproteobacteria,3JVTU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Branched-chain amino acid transport system / permease component	-	-	-	ko:K10440	ko02010,map02010	M00212	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	BPD_transp_2
SX1_k127_5143778_6	1230476.C207_05202	1.159e-204	657.0	COG1879@1|root,COG1879@2|Bacteria,1Q3KM@1224|Proteobacteria,2TVRK@28211|Alphaproteobacteria,3JUVC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Periplasmic binding protein domain	-	-	-	ko:K10439	ko02010,ko02030,map02010,map02030	M00212	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	Peripla_BP_4
SX1_k127_5143778_0	1297865.APJD01000003_gene6223	0.0	1433.0	COG1172@1|root,COG3386@1|root,COG1172@2|Bacteria,COG3386@2|Bacteria,1MX7V@1224|Proteobacteria,2U1AZ@28211|Alphaproteobacteria,3JRP9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Strictosidine synthase	-	-	-	ko:K10440	ko02010,map02010	M00212	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	BPD_transp_2,SGL,Str_synth
SX1_k127_5143778_4	1297865.APJD01000003_gene6222	6.731e-239	739.0	COG3386@1|root,COG3386@2|Bacteria,1R64I@1224|Proteobacteria,2U1AR@28211|Alphaproteobacteria,3JWWS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	PFAM SMP-30 Gluconolaconase	-	-	-	-	-	-	-	-	-	-	-	-	Str_synth
SX1_k127_5143778_1	1297865.APJD01000003_gene6221	1.065e-313	963.0	COG1129@1|root,COG1129@2|Bacteria,1MU22@1224|Proteobacteria,2TQJV@28211|Alphaproteobacteria,3JQYV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	ABC transporter	-	-	3.6.3.17	ko:K02056	-	M00221	-	-	ko00000,ko00002,ko01000,ko02000	3.A.1.2	-	-	ABC_tran
SX1_k127_5143778_5	1297865.APJD01000003_gene6220	8.23e-219	683.0	COG1835@1|root,COG1835@2|Bacteria,1MXVY@1224|Proteobacteria,2U53W@28211|Alphaproteobacteria,3JW9W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
SX1_k127_5143778_2	1297865.APJD01000003_gene6219	6.314e-267	823.0	COG2730@1|root,COG2730@2|Bacteria,1QV9C@1224|Proteobacteria,2VEYQ@28211|Alphaproteobacteria,3JTWS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Cellulase (glycosyl hydrolase family 5)	-	-	-	-	-	-	-	-	-	-	-	-	Cellulase
SX1_k127_5143778_8	1297865.APJD01000003_gene6218	2.94e-195	610.0	2DTFW@1|root,33K6G@2|Bacteria,1R8B3@1224|Proteobacteria,2TX35@28211|Alphaproteobacteria,3JRBH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5143778_3	1297865.APJD01000003_gene6217	4.735e-254	800.0	COG0438@1|root,COG0438@2|Bacteria,1MUYN@1224|Proteobacteria,2U21B@28211|Alphaproteobacteria,3JX3F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Glycosyl transferase 4-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
SX1_k127_5143778_7	1297865.APJD01000003_gene6216	3.384e-196	611.0	COG0438@1|root,COG0438@2|Bacteria,1NB81@1224|Proteobacteria,2U3N3@28211|Alphaproteobacteria,3K615@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
SX1_k127_5167112_0	1297865.APJD01000015_gene3442	1.938e-297	919.0	COG0045@1|root,COG1042@1|root,COG0045@2|Bacteria,COG1042@2|Bacteria,1MW98@1224|Proteobacteria,2TR24@28211|Alphaproteobacteria,3JRT1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA binding domain	-	-	-	-	-	-	-	-	-	-	-	-	ATP-grasp_5,Acetyltransf_3,CoA_binding_2,Succ_CoA_lig
SX1_k127_5167112_2	1297865.APJD01000015_gene3441	8.705e-166	521.0	COG0346@1|root,COG0346@2|Bacteria,1MW8Z@1224|Proteobacteria,2TS64@28211|Alphaproteobacteria,3JRWG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	lactoylglutathione lyase activity	MA20_40050	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase_3
SX1_k127_5167112_3	1297865.APJD01000015_gene3440	6.001e-164	517.0	COG1024@1|root,COG1024@2|Bacteria,1MVQN@1224|Proteobacteria,2U31Y@28211|Alphaproteobacteria,3JRTV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the enoyl-CoA hydratase isomerase family	MA20_40045	-	5.3.3.18	ko:K15866	ko00360,ko01120,map00360,map01120	-	R09837,R09839	RC00004,RC00326,RC02689,RC03003	ko00000,ko00001,ko01000	-	-	-	ECH_1
SX1_k127_5167112_1	1297865.APJD01000015_gene3439	8.419e-254	784.0	COG0683@1|root,COG0683@2|Bacteria,1MUCB@1224|Proteobacteria,2TRWV@28211|Alphaproteobacteria,3JU7H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein domain	MA20_40040	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_5167112_4	1297865.APJD01000015_gene3438	2.398e-71	241.0	COG2373@1|root,COG3210@1|root,COG4932@1|root,COG2373@2|Bacteria,COG3210@2|Bacteria,COG4932@2|Bacteria,1QUUN@1224|Proteobacteria,2TX9V@28211|Alphaproteobacteria,3K64F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	MU	Bacterial Ig-like domain (group 3)	-	-	-	-	-	-	-	-	-	-	-	-	Big_3_3,PATR
SX1_k127_5172804_2	1297865.APJD01000026_gene2479	2.399e-218	678.0	COG3842@1|root,COG3842@2|Bacteria,1MU3I@1224|Proteobacteria,2TQQJ@28211|Alphaproteobacteria,3JT2D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ABC transporter	MA20_13190	-	-	ko:K10112	ko02010,map02010	M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00491,M00602,M00605,M00606	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1	-	-	ABC_tran,TOBE,TOBE_2
SX1_k127_5172804_5	1297865.APJD01000026_gene2480	9.898e-194	610.0	COG0395@1|root,COG0395@2|Bacteria,1PG6Q@1224|Proteobacteria,2U1HZ@28211|Alphaproteobacteria,3JTY3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Binding-protein-dependent transport system inner membrane component	MA20_13195	-	-	ko:K02026	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	BPD_transp_1
SX1_k127_5172804_4	1297865.APJD01000026_gene2481	1.083e-200	626.0	COG1175@1|root,COG1175@2|Bacteria,1MXKR@1224|Proteobacteria,2TRDJ@28211|Alphaproteobacteria,3JUDP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Binding-protein-dependent transport system inner membrane component	MA20_13200	-	-	ko:K02025	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	BPD_transp_1
SX1_k127_5172804_0	1297865.APJD01000026_gene2482	1.109e-272	845.0	COG1653@1|root,COG1653@2|Bacteria,1MXY4@1224|Proteobacteria,2TS7N@28211|Alphaproteobacteria,3JU4D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Bacterial extracellular solute-binding protein	-	-	-	-	-	-	-	-	-	-	-	-	SBP_bac_1,SBP_bac_8
SX1_k127_5172804_6	1297865.APJD01000026_gene2483	2.992e-139	446.0	2FCGM@1|root,344K2@2|Bacteria,1MY21@1224|Proteobacteria,2U2D8@28211|Alphaproteobacteria,3JWIX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	LTXXQ motif family protein	-	-	-	-	-	-	-	-	-	-	-	-	LTXXQ
SX1_k127_5172804_9	114615.BRADO3472	7e-35	142.0	2900F@1|root,2ZMQR@2|Bacteria,1P528@1224|Proteobacteria,2UW2G@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5172804_8	1297865.APJD01000026_gene2484	1.998e-86	286.0	COG0346@1|root,COG0346@2|Bacteria,1N7R0@1224|Proteobacteria,2U65K@28211|Alphaproteobacteria,3JY8W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
SX1_k127_5172804_1	1297865.APJD01000026_gene2485	2.696e-260	803.0	COG1960@1|root,COG1960@2|Bacteria,1MXMQ@1224|Proteobacteria,2U0CV@28211|Alphaproteobacteria,3JUP6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	1.14.13.235	ko:K22027	-	-	-	-	ko00000,ko01000	-	-	-	Acyl-CoA_dh_2,Acyl-CoA_dh_N
SX1_k127_5172804_7	1230476.C207_07056	1.276e-97	319.0	COG0477@1|root,COG2814@2|Bacteria,1QAIM@1224|Proteobacteria,2U3KU@28211|Alphaproteobacteria,3JW30@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	-	-	-	-	-	-	-	-	-	-	-	-	Sugar_tr
SX1_k127_5172804_3	1297865.APJD01000026_gene2487	5.124e-201	626.0	COG0477@1|root,COG2814@2|Bacteria,1QAIM@1224|Proteobacteria,2U3KU@28211|Alphaproteobacteria,3JW30@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	-	-	-	-	-	-	-	-	-	-	-	-	Sugar_tr
SX1_k127_5173132_25	1297865.APJD01000026_gene2534	6.495e-25	104.0	COG0683@1|root,COG0683@2|Bacteria,1MWNB@1224|Proteobacteria,2U1BV@28211|Alphaproteobacteria,3K2DW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_5173132_22	1297865.APJD01000026_gene2535	1.932e-140	451.0	COG0410@1|root,COG0410@2|Bacteria,1MVVC@1224|Proteobacteria,2U61I@28211|Alphaproteobacteria,3K2KW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ATPases associated with a variety of cellular activities	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran
SX1_k127_5173132_21	1297865.APJD01000026_gene2536	4.973e-143	456.0	COG0411@1|root,COG0411@2|Bacteria,1R6NR@1224|Proteobacteria,2U48J@28211|Alphaproteobacteria,3K2E8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	AAA domain	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_5173132_11	1297865.APJD01000026_gene2537	9.672e-204	655.0	COG4177@1|root,COG4177@2|Bacteria,1PR27@1224|Proteobacteria,2U5QT@28211|Alphaproteobacteria,3K30H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	-	-	-	-	-	-	-	-	-	-	-	-	BPD_transp_2
SX1_k127_5173132_17	1297865.APJD01000026_gene2538	1.462e-165	522.0	COG0559@1|root,COG0559@2|Bacteria,1NWBN@1224|Proteobacteria,2U2TP@28211|Alphaproteobacteria,3K3JK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	-	-	-	-	-	-	-	-	-	-	-	-	BPD_transp_2
SX1_k127_5173132_23	1297865.APJD01000026_gene2539	7.37e-105	343.0	COG0406@1|root,COG0406@2|Bacteria	2|Bacteria	G	alpha-ribazole phosphatase activity	gpm	-	5.4.2.12	ko:K15634	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003	R01518	RC00536	ko00000,ko00001,ko00002,ko01000	-	-	-	His_Phos_1
SX1_k127_5173132_9	1297865.APJD01000026_gene2540	2.923e-235	727.0	28JIQ@1|root,2Z9BX@2|Bacteria,1RD6T@1224|Proteobacteria,2U9G1@28211|Alphaproteobacteria,3K46E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5173132_1	1297865.APJD01000026_gene2541	1.363e-266	829.0	COG2271@1|root,COG2271@2|Bacteria,1MUEK@1224|Proteobacteria,2U277@28211|Alphaproteobacteria,3K2IP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_5173132_8	1297865.APJD01000026_gene2542	4.73e-237	737.0	COG3178@1|root,COG3178@2|Bacteria,1QYS1@1224|Proteobacteria,2TXY8@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1679)	-	-	-	-	-	-	-	-	-	-	-	-	EcKinase
SX1_k127_5173132_16	1297865.APJD01000026_gene2543	3.374e-171	540.0	COG0583@1|root,COG0583@2|Bacteria	2|Bacteria	K	DNA-binding transcription factor activity	-	-	-	ko:K21757	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
SX1_k127_5173132_3	1297865.APJD01000026_gene2544	6.312e-259	801.0	COG2334@1|root,COG2334@2|Bacteria,1RBTQ@1224|Proteobacteria,2U6F4@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Ecdysteroid kinase	-	-	-	-	-	-	-	-	-	-	-	-	APH,EcKinase
SX1_k127_5173132_6	1297865.APJD01000026_gene2545	1.339e-255	790.0	COG0683@1|root,COG0683@2|Bacteria,1MWR8@1224|Proteobacteria,2UPD5@28211|Alphaproteobacteria,3K2W7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_5173132_26	258594.RPA0628	2.238e-06	51.0	COG3409@1|root,COG5480@1|root,COG3409@2|Bacteria,COG5480@2|Bacteria,1P9ZA@1224|Proteobacteria,2TSTF@28211|Alphaproteobacteria,3JVQW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Protein of unknown function (DUF1036)	MA20_21840	-	-	-	-	-	-	-	-	-	-	-	DUF1036,PG_binding_1
SX1_k127_5173132_2	1297865.APJD01000026_gene2546	5.417e-264	819.0	COG1804@1|root,COG1804@2|Bacteria,1MU2K@1224|Proteobacteria,2TR7Q@28211|Alphaproteobacteria,3JU55@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA-transferase family III	-	-	2.8.3.16	ko:K07749	-	-	-	-	ko00000,ko01000	-	-	-	CoA_transf_3
SX1_k127_5173132_0	1297865.APJD01000026_gene2547	5.341e-280	861.0	COG1024@1|root,COG1024@2|Bacteria,1R4IY@1224|Proteobacteria,2U2VD@28211|Alphaproteobacteria,3K2ZS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	-	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_5173132_4	1297865.APJD01000026_gene2548	4.614e-257	797.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TR15@28211|Alphaproteobacteria,3JXB8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_5173132_19	936455.KI421499_gene754	1.508e-149	477.0	COG1028@1|root,COG1028@2|Bacteria,1MU2T@1224|Proteobacteria,2TSDG@28211|Alphaproteobacteria,3JWEE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	1.1.1.100	ko:K00059,ko:K07535	ko00061,ko00333,ko00362,ko00780,ko01040,ko01100,ko01120,ko01130,ko01212,ko01220,map00061,map00333,map00362,map00780,map01040,map01100,map01120,map01130,map01212,map01220	M00083,M00540,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R05582,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117,RC00154	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
SX1_k127_5173132_15	1297865.APJD01000026_gene2550	9.046e-174	545.0	COG0447@1|root,COG0447@2|Bacteria,1QTZ2@1224|Proteobacteria,2U0ZZ@28211|Alphaproteobacteria,3JWVZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Belongs to the enoyl-CoA hydratase isomerase family. MenB subfamily	menB	-	-	ko:K07536	ko00362,ko01120,ko01220,map00362,map01120,map01220	M00540	R05592	RC01429	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
SX1_k127_5173132_12	1297865.APJD01000026_gene2551	4.56e-202	631.0	COG3246@1|root,COG3246@2|Bacteria,1MZTP@1224|Proteobacteria,2TQKN@28211|Alphaproteobacteria,3JS9Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	beta-keto acid cleavage enzyme	-	-	-	-	-	-	-	-	-	-	-	-	BKACE
SX1_k127_5173132_5	1297865.APJD01000026_gene2552	5.841e-256	792.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TR15@28211|Alphaproteobacteria,3K369@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	1.3.8.8	ko:K00255	ko00071,ko01100,ko01212,ko03320,map00071,map01100,map01212,map03320	M00087	R01279,R03777,R03857,R03990,R04751,R04754	RC00052	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_5173132_7	936455.KI421499_gene750	1.304e-252	787.0	COG1960@1|root,COG1960@2|Bacteria,1MVAH@1224|Proteobacteria,2TR02@28211|Alphaproteobacteria,3JVUT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_5173132_14	1297865.APJD01000026_gene2554	5.762e-184	582.0	COG2301@1|root,COG2301@2|Bacteria,1MW0A@1224|Proteobacteria,2TTC0@28211|Alphaproteobacteria,3JXVY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	HpcH/HpaI aldolase/citrate lyase family	-	-	4.1.3.34	ko:K01644	ko02020,map02020	-	R00362	RC00067,RC01118	ko00000,ko00001,ko01000	-	-	-	HpcH_HpaI
SX1_k127_5173132_24	1297865.APJD01000026_gene2555	5.354e-94	310.0	COG2030@1|root,COG2030@2|Bacteria,1MW4N@1224|Proteobacteria,2TQQ2@28211|Alphaproteobacteria,3JXUB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	N-terminal half of MaoC dehydratase	-	-	-	-	-	-	-	-	-	-	-	-	MaoC_dehydratas
SX1_k127_5173132_10	1297865.APJD01000026_gene2556	3.982e-223	691.0	COG2130@1|root,COG2130@2|Bacteria,1MUC2@1224|Proteobacteria,2TQYM@28211|Alphaproteobacteria,3K2XI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	N-terminal domain of oxidoreductase	-	-	-	ko:K07119	-	-	-	-	ko00000	-	-	-	ADH_N_2,ADH_zinc_N
SX1_k127_5173132_13	1297865.APJD01000026_gene2557	4.678e-191	596.0	COG1028@1|root,COG1028@2|Bacteria,1PFUB@1224|Proteobacteria,2U149@28211|Alphaproteobacteria,3JUGF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_5173132_18	1297865.APJD01000026_gene2558	1.462e-164	526.0	COG1024@1|root,COG1024@2|Bacteria,1MXHV@1224|Proteobacteria,2TTEG@28211|Alphaproteobacteria,3K3I5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	-	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_5173132_20	1297865.APJD01000026_gene2559	1.948e-146	464.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JWY5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme	-	-	-	ko:K04116	ko00362,ko01120,map00362,map01120	M00540	R05620	RC00004,RC01438	ko00000,ko00001,ko00002,ko01000	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_5174001_11	1297865.APJD01000004_gene5389	1.822e-14	72.0	COG0400@1|root,COG0400@2|Bacteria,1P51S@1224|Proteobacteria,2TT0Y@28211|Alphaproteobacteria,3JU1C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PFAM phospholipase Carboxylesterase	-	-	-	ko:K06999	-	-	-	-	ko00000	-	-	-	Abhydrolase_2
SX1_k127_5174001_1	1297865.APJD01000004_gene5390	1.602e-187	590.0	COG1028@1|root,COG1028@2|Bacteria,1PTQR@1224|Proteobacteria,2TQN4@28211|Alphaproteobacteria,3JTBN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	NAD dependent epimerase/dehydratase family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_5174001_3	398525.KB900701_gene2445	1.237e-143	458.0	COG1028@1|root,COG1028@2|Bacteria,1MU73@1224|Proteobacteria,2TV6T@28211|Alphaproteobacteria,3JU3Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	-	GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
SX1_k127_5174001_0	1297865.APJD01000004_gene5392	7.771e-193	601.0	COG0583@1|root,COG0583@2|Bacteria,1MV06@1224|Proteobacteria,2TT94@28211|Alphaproteobacteria,3JUDB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_5174001_10	1297865.APJD01000004_gene5393	5.502e-28	128.0	2BH7W@1|root,32B95@2|Bacteria,1NAB1@1224|Proteobacteria,2UG4T@28211|Alphaproteobacteria,3K0ZC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_20715	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5174001_9	1230476.C207_02648	6.227e-46	167.0	2AK9G@1|root,31AZV@2|Bacteria,1NXZ4@1224|Proteobacteria,2UT2W@28211|Alphaproteobacteria,3K4AW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5174001_6	1297865.APJD01000004_gene5395	1.99e-137	445.0	COG1296@1|root,COG1296@2|Bacteria,1MVGN@1224|Proteobacteria,2TVIA@28211|Alphaproteobacteria,3K6IJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	AzlC protein	azlC	-	-	-	-	-	-	-	-	-	-	-	AzlC
SX1_k127_5174001_7	1297865.APJD01000004_gene5396	2.094e-129	413.0	COG5516@1|root,COG5516@2|Bacteria,1N7M4@1224|Proteobacteria,2UGD1@28211|Alphaproteobacteria,3K1B1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative stress-induced transcription regulator	-	-	-	-	-	-	-	-	-	-	-	-	ABATE,zf-CGNR
SX1_k127_5174001_4	1297865.APJD01000004_gene5397	6.134e-141	448.0	COG1651@1|root,COG1651@2|Bacteria,1MX2T@1224|Proteobacteria,2TRAG@28211|Alphaproteobacteria,3JSDD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Thioredoxin	MA20_20720	-	-	-	-	-	-	-	-	-	-	-	DSBA,Thioredoxin_4
SX1_k127_5174001_2	1230476.C207_02644	4.474e-147	468.0	COG0730@1|root,COG0730@2|Bacteria,1MVBS@1224|Proteobacteria,2TQW0@28211|Alphaproteobacteria,3JUVG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sulfite exporter TauE/SafE	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
SX1_k127_5174001_5	1297865.APJD01000004_gene5399	7.38e-139	447.0	COG1346@1|root,COG1346@2|Bacteria,1MV81@1224|Proteobacteria,2TSP3@28211|Alphaproteobacteria,3JSP7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	LrgB-like family	lrgB	-	-	-	-	-	-	-	-	-	-	-	LrgB
SX1_k127_5174001_8	1297865.APJD01000004_gene5400	2.496e-66	228.0	COG1380@1|root,COG1380@2|Bacteria,1N753@1224|Proteobacteria,2UFFT@28211|Alphaproteobacteria,3JZ5D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	LrgA family	-	-	-	ko:K06518	-	-	-	-	ko00000,ko02000	1.E.14.2	-	-	LrgA
SX1_k127_5180596_8	1297865.APJD01000009_gene2826	2.046e-24	102.0	COG2961@1|root,COG2961@2|Bacteria,1MWGA@1224|Proteobacteria,2TU5K@28211|Alphaproteobacteria,3JUDU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Specifically methylates the adenine in position 2030 of 23S rRNA	rlmJ	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008988,GO:0009451,GO:0009987,GO:0010467,GO:0015976,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036307,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.266	ko:K07115	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	RsmJ
SX1_k127_5180596_7	335659.S23_60990	1.195e-38	148.0	COG1278@1|root,COG1278@2|Bacteria,1N6Q5@1224|Proteobacteria,2UF6W@28211|Alphaproteobacteria,3K03T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	'Cold-shock' DNA-binding domain	MA20_05565	-	-	ko:K03704	-	-	-	-	ko00000,ko03000	-	-	-	CSD
SX1_k127_5180596_3	1297865.APJD01000009_gene2827	1.936e-137	438.0	COG3637@1|root,COG3637@2|Bacteria,1MXV4@1224|Proteobacteria,2U0JD@28211|Alphaproteobacteria,3JTF8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Outer membrane protein beta-barrel domain	hbp2	GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944	-	ko:K16079	-	-	-	-	ko00000,ko02000	1.B.4.2.1	-	-	OMP_b-brl
SX1_k127_5180596_0	1297865.APJD01000009_gene2828	0.0	1386.0	COG0322@1|root,COG0322@2|Bacteria,1MV38@1224|Proteobacteria,2TT32@28211|Alphaproteobacteria,3JS2S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision	uvrC	GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009380,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0071496,GO:1902494,GO:1905347,GO:1905348,GO:1990391	-	ko:K03703	ko03420,map03420	-	-	-	ko00000,ko00001,ko03400	-	-	-	GIY-YIG,HHH_2,HHH_5,UVR,UvrC_HhH_N
SX1_k127_5180596_4	398525.KB900701_gene2736	5.721e-130	416.0	COG0558@1|root,COG0558@2|Bacteria,1RCZ7@1224|Proteobacteria,2TUI7@28211|Alphaproteobacteria,3JRMH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the CDP-alcohol phosphatidyltransferase class-I family	pgsA	-	2.7.8.41,2.7.8.5	ko:K00995,ko:K08744	ko00564,ko01100,map00564,map01100	-	R01801,R02030	RC00002,RC00017,RC02795	ko00000,ko00001,ko01000	-	-	-	CDP-OH_P_transf
SX1_k127_5180596_6	1297865.APJD01000009_gene2830	8.518e-49	174.0	COG1977@1|root,COG1977@2|Bacteria,1N0IE@1224|Proteobacteria,2UF4F@28211|Alphaproteobacteria,3K056@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin	moaD	-	-	ko:K03636	ko04122,map04122	-	-	-	ko00000,ko00001	-	-	-	ThiS
SX1_k127_5180596_5	1297865.APJD01000009_gene2831	1.319e-95	313.0	COG0314@1|root,COG0314@2|Bacteria,1RGUX@1224|Proteobacteria,2U73K@28211|Alphaproteobacteria,3JYB8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	MoaE protein	moaE	-	2.8.1.12	ko:K03635	ko00790,ko01100,ko04122,map00790,map01100,map04122	-	R09395	RC02507	ko00000,ko00001,ko01000	-	-	-	MoaE
SX1_k127_5180596_1	1297865.APJD01000009_gene2832	2.508e-211	662.0	COG2890@1|root,COG2890@2|Bacteria,1MX8Q@1224|Proteobacteria,2TSNS@28211|Alphaproteobacteria,3JS52@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the protein N5-glutamine methyltransferase family	prmB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564	2.1.1.298	ko:K07320	-	-	R10806	RC00003,RC03279	ko00000,ko01000,ko03009	-	-	-	MTS
SX1_k127_5180596_2	1297865.APJD01000009_gene2833	2.179e-158	501.0	COG2200@1|root,COG2200@2|Bacteria,1MU4F@1224|Proteobacteria,2TU9M@28211|Alphaproteobacteria,3JRX2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Putative diguanylate phosphodiesterase	MA20_05620	-	-	ko:K13593	ko04112,map04112	-	-	-	ko00000,ko00001	-	-	-	EAL
SX1_k127_5192900_1	1297865.APJD01000052_gene1218	2.336e-214	667.0	COG1459@1|root,COG1459@2|Bacteria,1MV4U@1224|Proteobacteria,2TV76@28211|Alphaproteobacteria,3JXX4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	Type II secretion system (T2SS), protein F	-	-	-	ko:K02455,ko:K02653	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02035,ko02044	3.A.15,3.A.15.2	-	-	T2SSF
SX1_k127_5192900_0	1297865.APJD01000052_gene1219	1.334e-302	929.0	COG2804@1|root,COG2804@2|Bacteria,1MU7V@1224|Proteobacteria,2TRMU@28211|Alphaproteobacteria,3JWAH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	Type II secretion system (T2SS), protein E, N-terminal domain	-	-	-	ko:K02454	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	T2SSE,T2SSE_N
SX1_k127_5194294_0	1297865.APJD01000003_gene6230	8.454e-236	734.0	COG2831@1|root,COG2831@2|Bacteria,1PRBP@1224|Proteobacteria,2U1SN@28211|Alphaproteobacteria,3JR7E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Haemolysin secretion/activation protein ShlB/FhaC/HecB	-	-	-	-	-	-	-	-	-	-	-	-	POTRA_2,ShlB
SX1_k127_5194294_1	1297865.APJD01000003_gene6229	3.943e-194	614.0	COG3712@1|root,COG3712@2|Bacteria,1N4W7@1224|Proteobacteria,2U0N1@28211|Alphaproteobacteria,3JV6V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	PT	Domain of unknown function (DUF4880)	-	-	-	ko:K07165	-	-	-	-	ko00000	-	-	-	DUF4880,DUF4974,FecR
SX1_k127_5194294_2	1230476.C207_05197	4.834e-107	348.0	COG1595@1|root,COG1595@2|Bacteria,1RHYH@1224|Proteobacteria,2UA7M@28211|Alphaproteobacteria,3JXUF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	ECF sigma factor	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
SX1_k127_5216067_2	1297865.APJD01000019_gene3340	2.428e-279	857.0	COG2072@1|root,COG2072@2|Bacteria,1MUQH@1224|Proteobacteria,2TRG4@28211|Alphaproteobacteria,3JSRW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Flavin-binding monooxygenase-like	-	-	1.14.13.226	ko:K18371	ko00640,map00640	-	R10704	RC03250	ko00000,ko00001,ko01000	-	-	-	FMO-like,Pyr_redox_2,Pyr_redox_3
SX1_k127_5216067_3	1230476.C207_06378	3.02e-261	809.0	COG1680@1|root,COG1680@2|Bacteria,1MVPR@1224|Proteobacteria,2TRWZ@28211|Alphaproteobacteria,3JTME@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase	-	-	-	ko:K18372	ko00640,map00640	-	R10705	RC00460,RC00461	ko00000,ko00001,ko01000	-	-	-	Beta-lactamase,DUF3471
SX1_k127_5216067_1	1297865.APJD01000019_gene3342	2.921e-289	893.0	COG0642@1|root,COG2205@2|Bacteria,1N1Z2@1224|Proteobacteria,2TVIP@28211|Alphaproteobacteria,3JVWW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
SX1_k127_5216067_8	1297865.APJD01000019_gene3343	8.96e-139	441.0	COG0745@1|root,COG0745@2|Bacteria,1NCKY@1224|Proteobacteria,2TRPQ@28211|Alphaproteobacteria,3JVV7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg,Trans_reg_C
SX1_k127_5216067_12	1297865.APJD01000019_gene3344	1.029e-124	399.0	COG3963@1|root,COG3963@2|Bacteria,1N1KB@1224|Proteobacteria,2U646@28211|Alphaproteobacteria,3JSCT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Ribosomal RNA adenine dimethylase	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25,RrnaAD
SX1_k127_5216067_10	1297865.APJD01000019_gene3345	3.042e-134	435.0	COG0586@1|root,COG0586@2|Bacteria,1MX4M@1224|Proteobacteria,2U6ZF@28211|Alphaproteobacteria,3JWK1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SNARE associated Golgi protein	-	-	3.1.3.1	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	M00126	R02135,R04620	RC00017	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147	-	-	-	SNARE_assoc
SX1_k127_5216067_5	1297865.APJD01000019_gene3346	2.909e-239	752.0	COG2908@1|root,COG2908@2|Bacteria,1MVKD@1224|Proteobacteria,2TSEB@28211|Alphaproteobacteria,3JXX6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Calcineurin-like phosphoesterase superfamily domain	lpxH	-	-	-	-	-	-	-	-	-	-	-	Metallophos,Metallophos_2
SX1_k127_5216067_6	1297865.APJD01000019_gene3347	8.991e-229	709.0	COG0438@1|root,COG0438@2|Bacteria,1MUB7@1224|Proteobacteria,2TQQ0@28211|Alphaproteobacteria,3JTNY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	glycosyl transferase group 1	mgtA	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1
SX1_k127_5216067_4	1297865.APJD01000019_gene3348	4.282e-243	751.0	COG0498@1|root,COG0498@2|Bacteria,1R7X1@1224|Proteobacteria,2TUR3@28211|Alphaproteobacteria,3JTSA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Pyridoxal-phosphate dependent enzyme	MA20_04465	-	4.2.3.1	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	M00018	R01466,R05086	RC00017,RC00526	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
SX1_k127_5216067_0	1297865.APJD01000019_gene3349	0.0	1418.0	COG0365@1|root,COG0365@2|Bacteria,1MUX7@1224|Proteobacteria,2TRND@28211|Alphaproteobacteria,3JQRB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acetyl-coenzyme A synthetase N-terminus	-	-	6.2.1.16	ko:K01907	ko00280,ko00650,map00280,map00650	-	R01357	RC00004,RC00014	ko00000,ko00001,ko01000,ko01004	-	-	-	ACAS_N,AMP-binding,AMP-binding_C
SX1_k127_5216067_7	1297865.APJD01000019_gene3350	8.322e-213	661.0	COG1472@1|root,COG1472@2|Bacteria,1NSMF@1224|Proteobacteria,2U3SF@28211|Alphaproteobacteria,3JUCU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Glycosyl hydrolase family 3 N terminal domain	-	-	3.2.1.52	ko:K01207	ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501	M00628	R00022,R05963,R07809,R07810,R10831	RC00049	ko00000,ko00001,ko00002,ko01000	-	-	-	Glyco_hydro_3
SX1_k127_5216067_16	172088.AUGA01000069_gene6852	1.956e-23	100.0	2BMZI@1|root,32GJG@2|Bacteria,1NQ6R@1224|Proteobacteria,2UN7I@28211|Alphaproteobacteria,3K23G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5216067_14	1297865.APJD01000019_gene3351	1.29e-78	267.0	2CI53@1|root,2ZTP9@2|Bacteria,1R3BG@1224|Proteobacteria,2U75J@28211|Alphaproteobacteria,3JYTP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5216067_13	1297865.APJD01000019_gene3352	4.188e-113	366.0	COG2197@1|root,COG2197@2|Bacteria,1PKM2@1224|Proteobacteria,2U0D3@28211|Alphaproteobacteria,3JWV1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE
SX1_k127_5216067_15	1297865.APJD01000019_gene3353	1.159e-40	161.0	2ABNU@1|root,3114P@2|Bacteria,1N10M@1224|Proteobacteria,2UC2Q@28211|Alphaproteobacteria,3K058@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5216067_11	1297865.APJD01000019_gene3354	4.006e-130	420.0	COG0664@1|root,COG0664@2|Bacteria,1NEQM@1224|Proteobacteria,2U1CS@28211|Alphaproteobacteria,3JRBJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Transcriptional regulator, Crp Fnr family	MA20_44180	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,cNMP_binding
SX1_k127_5216067_9	172088.AUGA01000069_gene6857	4.713e-138	441.0	COG0664@1|root,COG0664@2|Bacteria,1NEQM@1224|Proteobacteria,2U3W1@28211|Alphaproteobacteria,3JWGV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Cyclic nucleotide-monophosphate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,cNMP_binding
SX1_k127_5226559_3	1297865.APJD01000003_gene6169	1.805e-49	176.0	COG1960@1|root,COG1960@2|Bacteria,1MUBH@1224|Proteobacteria,2TVBB@28211|Alphaproteobacteria,3JRDX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	acyl-CoA dehydrogenase	MA20_22775	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_5226559_0	1297865.APJD01000003_gene6170	3.56e-231	717.0	COG0834@1|root,COG0834@2|Bacteria,1MV5D@1224|Proteobacteria,2TSRF@28211|Alphaproteobacteria,3JTGX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	ET	Belongs to the bacterial solute-binding protein 3 family	MA20_22770	-	-	ko:K09969	ko02010,map02010	M00232	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3.18,3.A.1.3.7,3.A.1.3.8	-	-	SBP_bac_3
SX1_k127_5226559_1	1297865.APJD01000003_gene6171	7.141e-130	416.0	COG1376@1|root,COG1376@2|Bacteria,1MVYT@1224|Proteobacteria,2U60K@28211|Alphaproteobacteria,3JRA0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	L,D-transpeptidase catalytic domain	MA20_22765	-	-	-	-	-	-	-	-	-	-	-	YkuD
SX1_k127_5226559_4	1297865.APJD01000003_gene6172	8.013e-21	98.0	2AGM6@1|root,316UD@2|Bacteria,1NIF3@1224|Proteobacteria,2UJFT@28211|Alphaproteobacteria,3K1SA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5226559_2	1297865.APJD01000003_gene6173	4.299e-75	252.0	COG1294@1|root,COG1294@2|Bacteria,1MURP@1224|Proteobacteria,2TU3I@28211|Alphaproteobacteria,3JT59@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	oxidase, subunit II	cydB	-	1.10.3.14	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cyt_bd_oxida_II
SX1_k127_5232096_11	1230476.C207_00563	1.302e-120	388.0	COG1075@1|root,COG1075@2|Bacteria,1N2W0@1224|Proteobacteria,2U0MD@28211|Alphaproteobacteria,3JT71@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	acetyltransferases and hydrolases with the alpha beta hydrolase fold	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6,Hydrolase_4
SX1_k127_5232096_9	1297865.APJD01000014_gene875	9.023e-186	597.0	COG1024@1|root,COG1024@2|Bacteria,1MVPQ@1224|Proteobacteria,2TTJ4@28211|Alphaproteobacteria,3JSCJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	enoyl-CoA hydratase	MA20_32365	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_5232096_3	1297865.APJD01000014_gene874	1.394e-313	963.0	COG0154@1|root,COG0154@2|Bacteria,1MW3Z@1224|Proteobacteria,2TS56@28211|Alphaproteobacteria,3JRX9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Amidase	MA20_32360	-	3.5.1.4,6.3.5.6,6.3.5.7	ko:K01426,ko:K02433	ko00330,ko00360,ko00380,ko00627,ko00643,ko00970,ko01100,ko01120,map00330,map00360,map00380,map00627,map00643,map00970,map01100,map01120	-	R02540,R03096,R03180,R03905,R03909,R04212,R05551,R05590	RC00010,RC00100,RC00950,RC01025	ko00000,ko00001,ko01000,ko03029	-	-	-	Amidase
SX1_k127_5232096_7	288000.BBta_5260	7.995e-228	708.0	COG1473@1|root,COG1473@2|Bacteria,1MUIV@1224|Proteobacteria,2TR5B@28211|Alphaproteobacteria,3JUGN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Peptidase dimerisation domain	MA20_32355	-	-	-	-	-	-	-	-	-	-	-	M20_dimer,Peptidase_M20
SX1_k127_5232096_2	1297865.APJD01000014_gene872	0.0	1028.0	COG5476@1|root,COG5476@2|Bacteria,1MX4P@1224|Proteobacteria,2TS1C@28211|Alphaproteobacteria,3JRKN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC)	MA20_32350	-	-	-	-	-	-	-	-	-	-	-	DUF1485,MlrC_C
SX1_k127_5232096_1	1297865.APJD01000014_gene871	0.0	1070.0	COG1123@1|root,COG4172@2|Bacteria,1MU09@1224|Proteobacteria,2TQP0@28211|Alphaproteobacteria,3JTTR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the ABC transporter superfamily	MA20_32345	-	-	ko:K02031,ko:K02032	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
SX1_k127_5232096_10	1297865.APJD01000014_gene870	2.633e-178	559.0	COG1173@1|root,COG1173@2|Bacteria,1MVER@1224|Proteobacteria,2TRB3@28211|Alphaproteobacteria,3JRHV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Binding-protein-dependent transport system inner membrane component	MA20_32340	-	-	ko:K02034	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1,OppC_N
SX1_k127_5232096_8	1297865.APJD01000014_gene869	8.654e-192	601.0	COG0601@1|root,COG0601@2|Bacteria,1MU8Z@1224|Proteobacteria,2TRH6@28211|Alphaproteobacteria,3JSES@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	MA20_32335	-	-	ko:K02033	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
SX1_k127_5232096_5	1297865.APJD01000014_gene868	7.825e-290	893.0	COG0624@1|root,COG0624@2|Bacteria,1MW2W@1224|Proteobacteria,2TQYZ@28211|Alphaproteobacteria,3JX22@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Peptidase dimerisation domain	-	-	3.5.1.16	ko:K01438	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	M00028,M00845	R00669,R09107	RC00064,RC00300	ko00000,ko00001,ko00002,ko01000	-	-	-	M20_dimer,Peptidase_M20
SX1_k127_5232096_4	1297865.APJD01000014_gene867	2.647e-293	902.0	COG0665@1|root,COG0665@2|Bacteria,1MVIZ@1224|Proteobacteria,2TRT9@28211|Alphaproteobacteria,3JSM9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	FAD dependent oxidoreductase	MA20_32330	-	1.4.5.1	ko:K00285	ko00360,map00360	-	R01374,R09493	RC00006,RC00025	ko00000,ko00001,ko01000	-	-	-	DAO
SX1_k127_5232096_6	1230476.C207_00552	4.627e-243	756.0	COG0624@1|root,COG0624@2|Bacteria,1MUSU@1224|Proteobacteria,2TRTW@28211|Alphaproteobacteria,3JR23@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Peptidase dimerisation domain	MA20_32325	-	3.4.17.11	ko:K01295	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20,Peptidase_M28
SX1_k127_5232096_0	1297865.APJD01000014_gene865	0.0	1114.0	COG0747@1|root,COG0747@2|Bacteria,1MWBH@1224|Proteobacteria,2TTF4@28211|Alphaproteobacteria,3JT87@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K02035	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	SBP_bac_5
SX1_k127_5242713_9	1297865.APJD01000007_gene2184	4.167e-120	388.0	COG1132@1|root,COG1132@2|Bacteria,1MUBM@1224|Proteobacteria,2U0IT@28211|Alphaproteobacteria,3K3SY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	ABC transporter transmembrane region	-	-	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
SX1_k127_5242713_2	1297865.APJD01000007_gene2183	5.888e-252	780.0	COG0477@1|root,COG2814@2|Bacteria,1MUZ8@1224|Proteobacteria	1224|Proteobacteria	EGP	Major facilitator Superfamily	-	-	-	ko:K08218	ko01501,map01501	M00628	-	-	ko00000,ko00001,ko00002,ko02000	2.A.1.25	-	-	Acatn,MFS_1
SX1_k127_5242713_5	1297865.APJD01000007_gene2182	1.662e-203	636.0	COG2207@1|root,COG2207@2|Bacteria,1R5XY@1224|Proteobacteria,2UFH2@28211|Alphaproteobacteria,3K5XK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	ko:K12243	-	-	-	-	ko00000,ko03000	-	-	-	HTH_18
SX1_k127_5242713_1	1297865.APJD01000007_gene2181	0.0	1073.0	COG1021@1|root,COG1021@2|Bacteria,1NSN8@1224|Proteobacteria,2TVX6@28211|Alphaproteobacteria,3K70R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	AMP-binding enzyme C-terminal domain	entE	-	2.7.7.58,6.3.2.14	ko:K02363	ko01053,ko01110,ko01130,map01053,map01110,map01130	-	R07644	RC00162,RC03046	ko00000,ko00001,ko01000,ko01008	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_5242713_7	1297865.APJD01000007_gene2180	6.916e-147	467.0	COG0500@1|root,COG2226@2|Bacteria,1N3MC@1224|Proteobacteria	1224|Proteobacteria	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25
SX1_k127_5242713_6	1297865.APJD01000007_gene2179	2.994e-166	524.0	COG3208@1|root,COG3208@2|Bacteria,1RGYT@1224|Proteobacteria,2U9ZM@28211|Alphaproteobacteria,3K0UH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Thioesterase domain	-	-	3.1.2.21	ko:K01071	ko00061,ko01100,map00061,map01100	-	R04014,R08157,R08158	RC00014,RC00039	ko00000,ko00001,ko01000,ko01004	-	-	-	Thioesterase
SX1_k127_5242713_4	1297865.APJD01000007_gene2178	3.003e-235	743.0	COG4693@1|root,COG4693@2|Bacteria,1MXUG@1224|Proteobacteria,2UA56@28211|Alphaproteobacteria,3K4J9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Oxidoreductase family, NAD-binding Rossmann fold	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
SX1_k127_5242713_3	1297865.APJD01000007_gene2177	1.881e-238	743.0	COG1748@1|root,COG1748@2|Bacteria,1RE6H@1224|Proteobacteria,2UVSB@28211|Alphaproteobacteria	28211|Alphaproteobacteria	E	Saccharopine dehydrogenase NADP binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Sacchrp_dh_NADP
SX1_k127_5242713_0	1297865.APJD01000007_gene2176	0.0	3664.0	COG0500@1|root,COG1020@1|root,COG1020@2|Bacteria,COG2226@2|Bacteria,1QK4F@1224|Proteobacteria,2TRUN@28211|Alphaproteobacteria,3JQV9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Phosphopantetheine attachment site	-	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C,Condensation,Methyltransf_12,Methyltransf_23,Nitroreductase,PP-binding,Thioesterase
SX1_k127_5242713_8	1297865.APJD01000007_gene2175	5.066e-125	400.0	COG1020@1|root,COG1020@2|Bacteria,1QK4F@1224|Proteobacteria,2TRUN@28211|Alphaproteobacteria,3JQV9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Phosphopantetheine attachment site	-	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C,Condensation,Nitroreductase,PP-binding,Thioesterase
SX1_k127_524478_5	288000.BBta_7724	4.898e-28	117.0	COG5489@1|root,COG5489@2|Bacteria,1RDDE@1224|Proteobacteria,2U6ZR@28211|Alphaproteobacteria,3JZQG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF736)	-	-	-	-	-	-	-	-	-	-	-	-	DUF736
SX1_k127_524478_3	1297865.APJD01000033_gene6915	1.797e-81	276.0	2DPU3@1|root,32UMR@2|Bacteria,1MZUC@1224|Proteobacteria,2U7QP@28211|Alphaproteobacteria,3JY27@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_524478_6	1297865.APJD01000033_gene6916	1.874e-27	112.0	2EBH9@1|root,335HS@2|Bacteria,1N7N6@1224|Proteobacteria,2UFCX@28211|Alphaproteobacteria,3K17W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_524478_8	438753.AZC_3838	0.0001799	49.0	2EBH9@1|root,335HS@2|Bacteria,1N7N6@1224|Proteobacteria,2UFCX@28211|Alphaproteobacteria,3F03I@335928|Xanthobacteraceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_524478_4	1041147.AUFB01000013_gene173	3.381e-38	145.0	COG1396@1|root,COG1396@2|Bacteria	2|Bacteria	K	sequence-specific DNA binding	-	-	-	-	-	-	-	-	-	-	-	-	HTH_3
SX1_k127_524478_2	1297865.APJD01000033_gene6917	5.087e-215	672.0	2C0ZE@1|root,2Z7S6@2|Bacteria,1MW5M@1224|Proteobacteria,2TQVZ@28211|Alphaproteobacteria,3JSD7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2493)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2493
SX1_k127_524478_7	441620.Mpop_3067	1.741e-06	53.0	2C0ZE@1|root,2Z7S6@2|Bacteria,1MW5M@1224|Proteobacteria,2TQVZ@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2493)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2493
SX1_k127_524478_1	1297865.APJD01000033_gene6918	1.657e-226	703.0	COG4643@1|root,COG4643@2|Bacteria,1MW9E@1224|Proteobacteria,2TS3B@28211|Alphaproteobacteria,3JT6Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Toprim domain	-	-	-	-	-	-	-	-	-	-	-	-	Toprim_3
SX1_k127_524478_0	1297865.APJD01000033_gene6919	0.0	2819.0	COG0553@1|root,COG0553@2|Bacteria,1MXQH@1224|Proteobacteria,2TR5V@28211|Alphaproteobacteria,3JRHR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KL	Evidence Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	AAA_34,Helicase_C_4
SX1_k127_5245180_0	1297865.APJD01000003_gene6193	1.122e-279	861.0	COG2211@1|root,COG2211@2|Bacteria,1QTSE@1224|Proteobacteria,2TWGV@28211|Alphaproteobacteria,3JS00@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Acetyl-coenzyme A transporter 1	ampG	-	-	ko:K08218	ko01501,map01501	M00628	-	-	ko00000,ko00001,ko00002,ko02000	2.A.1.25	-	-	Acatn,MFS_1
SX1_k127_5245180_11	224911.27348962	9.054e-08	53.0	COG2050@1|root,COG2050@2|Bacteria,1R5RX@1224|Proteobacteria,2U1DZ@28211|Alphaproteobacteria,3JVKP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Thioesterase-like superfamily	MA20_24410	-	-	-	-	-	-	-	-	-	-	-	4HBT_3
SX1_k127_5245180_9	1038860.AXAP01000061_gene2365	1.022e-47	172.0	COG2827@1|root,COG2827@2|Bacteria,1MZME@1224|Proteobacteria,2UCNX@28211|Alphaproteobacteria,3JZEM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	GIY-YIG type nucleases (URI domain)	-	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
SX1_k127_5245180_1	1297865.APJD01000003_gene6194	2.724e-249	774.0	COG1322@1|root,COG1322@2|Bacteria,1MWHV@1224|Proteobacteria,2TTX6@28211|Alphaproteobacteria,3JTBH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	RmuC family	rmuC	-	-	ko:K09760	-	-	-	-	ko00000	-	-	-	RmuC
SX1_k127_5245180_8	1230476.C207_05245	1.42e-104	340.0	COG0242@1|root,COG0242@2|Bacteria,1RA2P@1224|Proteobacteria,2U797@28211|Alphaproteobacteria,3JTAJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions	def	GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564	3.5.1.31,3.5.1.88	ko:K01450,ko:K01462	ko00270,ko00630,map00270,map00630	-	R00653	RC00165,RC00323	ko00000,ko00001,ko01000	-	-	-	Pep_deformylase
SX1_k127_5245180_4	1297865.APJD01000003_gene6196	2.951e-196	613.0	COG0223@1|root,COG0223@2|Bacteria,1MU4Q@1224|Proteobacteria,2TSWX@28211|Alphaproteobacteria,3JTIQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus	fmt	GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	2.1.2.9	ko:K00604	ko00670,ko00970,map00670,map00970	-	R03940	RC00026,RC00165	ko00000,ko00001,ko01000	-	-	-	Formyl_trans_C,Formyl_trans_N
SX1_k127_5245180_6	1297865.APJD01000003_gene6197	1.09e-161	511.0	COG0101@1|root,COG0101@2|Bacteria,1MUYI@1224|Proteobacteria,2TR57@28211|Alphaproteobacteria,3JRMC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs	truA	GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360	5.4.99.12	ko:K06173	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	PseudoU_synth_1
SX1_k127_5245180_2	1230476.C207_05242	5.018e-245	757.0	COG0624@1|root,COG0624@2|Bacteria,1MW6G@1224|Proteobacteria,2TT0J@28211|Alphaproteobacteria,3JSVD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls	dapE	-	3.5.1.18	ko:K01439	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	M00016	R02734	RC00064,RC00090	ko00000,ko00001,ko00002,ko01000	-	-	-	M20_dimer,Peptidase_M20
SX1_k127_5245180_10	1297865.APJD01000003_gene6199	1.453e-40	150.0	COG2171@1|root,COG2171@2|Bacteria,1MU0Y@1224|Proteobacteria,2TS3H@28211|Alphaproteobacteria,3JTP8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the transferase hexapeptide repeat family	dapD	-	2.3.1.117	ko:K00674	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	M00016	R04365	RC00004,RC01136	ko00000,ko00001,ko00002,ko01000	-	-	-	Hexapep,Hexapep_2,THDPS_N_2
SX1_k127_5245180_7	1297865.APJD01000003_gene6200	2.638e-151	482.0	COG1011@1|root,COG1011@2|Bacteria,1PHPQ@1224|Proteobacteria,2TUDN@28211|Alphaproteobacteria,3JQW1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Haloacid dehalogenase-like hydrolase	MA20_21845	-	-	ko:K07025	-	-	-	-	ko00000	-	-	-	HAD_2
SX1_k127_5245180_3	1297865.APJD01000003_gene6201	1.489e-215	670.0	COG3409@1|root,COG5480@1|root,COG3409@2|Bacteria,COG5480@2|Bacteria,1P9ZA@1224|Proteobacteria,2TSTF@28211|Alphaproteobacteria,3JVQW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Protein of unknown function (DUF1036)	MA20_21840	-	-	-	-	-	-	-	-	-	-	-	DUF1036,PG_binding_1
SX1_k127_5245180_5	1297865.APJD01000003_gene6202	1.236e-183	576.0	COG0548@1|root,COG0548@2|Bacteria,1MU17@1224|Proteobacteria,2TQQS@28211|Alphaproteobacteria,3JVXI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the acetylglutamate kinase family. ArgB subfamily	argB	GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.7.2.8	ko:K00930	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	M00028	R02649	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase
SX1_k127_5245489_3	1297865.APJD01000009_gene2750	6.474e-79	266.0	COG0300@1|root,COG0300@2|Bacteria,1NT7C@1224|Proteobacteria,2U0P1@28211|Alphaproteobacteria,3JU7Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_5245489_2	1297865.APJD01000009_gene2749	1.485e-79	267.0	COG0784@1|root,COG0784@2|Bacteria,1RM32@1224|Proteobacteria,2U796@28211|Alphaproteobacteria,3JYXE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	cheY-homologous receiver domain	MA20_04865	-	-	-	-	-	-	-	-	-	-	-	Response_reg
SX1_k127_5245489_0	1297865.APJD01000009_gene2748	4.027e-196	611.0	COG0412@1|root,COG0412@2|Bacteria,1R5J6@1224|Proteobacteria,2UE6V@28211|Alphaproteobacteria,3K3GU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Prolyl oligopeptidase family	-	-	-	-	-	-	-	-	-	-	-	-	DLH,Peptidase_S9
SX1_k127_5245489_1	1297865.APJD01000009_gene2747	4.528e-118	381.0	COG1280@1|root,COG1280@2|Bacteria,1MXAI@1224|Proteobacteria,2TQWG@28211|Alphaproteobacteria,3JU18@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	LysE type translocator	MA20_04860	-	-	-	-	-	-	-	-	-	-	-	LysE
SX1_k127_5245489_4	1297865.APJD01000009_gene2746	8.919e-10	62.0	COG2199@1|root,COG3706@2|Bacteria,1MVME@1224|Proteobacteria,2TV5Y@28211|Alphaproteobacteria,3JS9X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	diguanylate cyclase	-	-	-	-	-	-	-	-	-	-	-	-	GGDEF
SX1_k127_526049_0	1297865.APJD01000018_gene5750	3.775e-218	676.0	COG1960@1|root,COG1960@2|Bacteria,1R3ZA@1224|Proteobacteria,2U0KZ@28211|Alphaproteobacteria,3JUXM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_526049_1	1297865.APJD01000018_gene5749	4.956e-187	586.0	2CDIE@1|root,33QUZ@2|Bacteria,1MUZ0@1224|Proteobacteria,2U4E7@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5265530_6	1297865.APJD01000026_gene2403	3.975e-29	116.0	COG3212@1|root,COG3212@2|Bacteria,1R5HE@1224|Proteobacteria,2U2SB@28211|Alphaproteobacteria,3JU3I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Peptidase propeptide and YPEB domain	-	-	-	-	-	-	-	-	-	-	-	-	PepSY
SX1_k127_5265530_1	1297865.APJD01000026_gene2402	7.072e-220	682.0	COG0136@1|root,COG0136@2|Bacteria,1MUHG@1224|Proteobacteria,2TSRD@28211|Alphaproteobacteria,3JV4V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate	asd	-	1.2.1.11	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R02291	RC00684	ko00000,ko00001,ko00002,ko01000	-	-	-	Semialdhyde_dh,Semialdhyde_dhC
SX1_k127_5265530_0	1297865.APJD01000026_gene2401	3.118e-230	717.0	COG0809@1|root,COG0809@2|Bacteria,1MUH3@1224|Proteobacteria,2TS0D@28211|Alphaproteobacteria,3JUTD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)	queA	GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	2.4.99.17	ko:K07568	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	Queuosine_synth
SX1_k127_5265530_4	1297865.APJD01000026_gene2400	3.223e-96	317.0	COG0652@1|root,COG0652@2|Bacteria,1R9ZQ@1224|Proteobacteria,2U591@28211|Alphaproteobacteria,3JR75@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides	ppiB	-	5.2.1.8	ko:K01802,ko:K09565	ko04020,ko04022,ko05012,ko05016,ko05145,map04020,map04022,map05012,map05016,map05145	-	-	-	ko00000,ko00001,ko01000,ko03110	-	-	-	Pro_isomerase
SX1_k127_5265530_5	189753.AXAS01000060_gene8339	1.603e-46	171.0	2E5B6@1|root,3303A@2|Bacteria,1RDY2@1224|Proteobacteria,2TVMZ@28211|Alphaproteobacteria,3JY82@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5265530_2	1297865.APJD01000026_gene2398	1.384e-114	371.0	COG0652@1|root,COG0652@2|Bacteria,1R9ZQ@1224|Proteobacteria,2U591@28211|Alphaproteobacteria,3JSVU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides	ppiA	-	5.2.1.8	ko:K01802,ko:K03767,ko:K03768,ko:K09565	ko01503,ko04020,ko04022,ko04217,ko05012,ko05016,ko05145,map01503,map04020,map04022,map04217,map05012,map05016,map05145	-	-	-	ko00000,ko00001,ko01000,ko03110,ko04147	-	-	-	Pro_isomerase
SX1_k127_5265530_3	1297865.APJD01000026_gene2397	6.885e-100	326.0	COG0669@1|root,COG0669@2|Bacteria,1RD9F@1224|Proteobacteria,2U74H@28211|Alphaproteobacteria,3JV4W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate	coaD	-	2.7.7.3	ko:K00954	ko00770,ko01100,map00770,map01100	M00120	R03035	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_like
SX1_k127_5270505_2	1297865.APJD01000014_gene984	8.165e-30	119.0	COG0789@1|root,COG0789@2|Bacteria,1RH2U@1224|Proteobacteria,2U73A@28211|Alphaproteobacteria,3JYFT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, mercury resistance	soxR	-	-	ko:K13639	-	-	-	-	ko00000,ko03000	-	-	-	MerR,MerR-DNA-bind,MerR_1
SX1_k127_5270505_1	1297865.APJD01000014_gene983	3.6e-224	697.0	COG0845@1|root,COG0845@2|Bacteria,1MUFW@1224|Proteobacteria,2U2CU@28211|Alphaproteobacteria,3JQRQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	ko:K18306	ko02024,map02024	M00644	-	-	ko00000,ko00001,ko00002,ko02000	2.A.6.2.20,2.A.6.2.32,8.A.1	-	-	HlyD_D23
SX1_k127_5270505_0	1297865.APJD01000014_gene982	0.0	1376.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JXAF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	MMPL family	-	-	-	ko:K18138,ko:K18307	ko01501,ko01503,ko02024,map01501,map01503,map02024	M00644,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	2.A.6.2,2.A.6.2.20,2.A.6.2.32	-	-	ACR_tran
SX1_k127_5271712_0	1297865.APJD01000009_gene2945	0.0	2401.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,3JVPA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Putative diguanylate phosphodiesterase	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GAF_2,GGDEF
SX1_k127_5271712_5	316056.RPC_4037	7.02e-22	99.0	2B0ZA@1|root,31TCG@2|Bacteria,1REQ6@1224|Proteobacteria,2U9NG@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5271712_3	1297865.APJD01000009_gene2943	1.805e-103	344.0	COG1917@1|root,COG1917@2|Bacteria,1QEE2@1224|Proteobacteria,2UDNV@28211|Alphaproteobacteria,3JY9N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Cupin 2, conserved barrel domain protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF4437
SX1_k127_5271712_2	1230476.C207_06437	4.116e-122	396.0	COG2755@1|root,COG2755@2|Bacteria,1MWT8@1224|Proteobacteria,2TTXF@28211|Alphaproteobacteria,3JRB1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Domain of Unknown Function (DUF1080)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1080
SX1_k127_5271712_1	1297865.APJD01000009_gene2941	5.674e-307	950.0	2C6I7@1|root,2ZAJE@2|Bacteria,1N55E@1224|Proteobacteria,2TU9Z@28211|Alphaproteobacteria,3JV93@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5271712_4	1297865.APJD01000009_gene2940	1.97e-67	229.0	COG2730@1|root,COG2730@2|Bacteria,1N2XP@1224|Proteobacteria,2U7H3@28211|Alphaproteobacteria,3JVIB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Cellulase (glycosyl hydrolase family 5)	-	-	3.2.1.4	ko:K01179	ko00500,ko01100,map00500,map01100	-	R06200,R11307,R11308	-	ko00000,ko00001,ko01000	-	GH5,GH9	-	Cellulase
SX1_k127_5283639_2	1297865.APJD01000011_gene6816	1.489e-95	316.0	COG4674@1|root,COG4674@2|Bacteria,1MUBR@1224|Proteobacteria,2TQVJ@28211|Alphaproteobacteria,3JVGV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Branched-chain amino acid ATP-binding cassette transporter	urtD	-	-	ko:K11962	ko02010,map02010	M00323	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4.4,3.A.1.4.5	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_5283639_1	1297865.APJD01000011_gene6815	2.388e-250	777.0	COG4177@1|root,COG4177@2|Bacteria,1MUPI@1224|Proteobacteria,2TTN2@28211|Alphaproteobacteria,3JRRF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	urtC	-	-	ko:K11961	ko02010,map02010	M00323	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4.4,3.A.1.4.5	-	-	BPD_transp_2
SX1_k127_5283639_0	172088.AUGA01000001_gene6493	1.573e-308	951.0	COG0559@1|root,COG0559@2|Bacteria,1MVND@1224|Proteobacteria,2TRMA@28211|Alphaproteobacteria,3JV23@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the binding-protein-dependent transport system permease family	urtB	-	-	ko:K11960	ko02010,map02010	M00323	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4.4,3.A.1.4.5	-	-	BPD_transp_2
SX1_k127_5283639_3	1298867.AUES01000010_gene5754	7.082e-23	97.0	COG0683@1|root,COG0683@2|Bacteria,1MU8V@1224|Proteobacteria,2TS3I@28211|Alphaproteobacteria,3JR4H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein domain	urtA	-	-	ko:K11959	ko02010,map02010	M00323	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4.4,3.A.1.4.5	-	-	Peripla_BP_5
SX1_k127_5284141_10	1297865.APJD01000018_gene5660	8.962e-80	269.0	COG0508@1|root,COG4249@1|root,COG0508@2|Bacteria,COG4249@2|Bacteria,1R954@1224|Proteobacteria,2TWG4@28211|Alphaproteobacteria,3JTD6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Peptidase C14 caspase catalytic subunit p20	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5284141_1	1297865.APJD01000018_gene5659	3.468e-283	877.0	COG0104@1|root,COG0104@2|Bacteria,1MU5B@1224|Proteobacteria,2TRKY@28211|Alphaproteobacteria,3JQNC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP	purA	GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.4.4	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	M00049	R01135	RC00458,RC00459	ko00000,ko00001,ko00002,ko01000	-	-	-	Adenylsucc_synt
SX1_k127_5284141_8	1297865.APJD01000018_gene5658	9.394e-93	308.0	COG2606@1|root,COG2606@2|Bacteria,1RGX5@1224|Proteobacteria,2U5DV@28211|Alphaproteobacteria,3JVQ1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Aminoacyl-tRNA editing domain	ybaK	GO:0002161,GO:0003674,GO:0003824,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0043906,GO:0044237,GO:0044238,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360	-	ko:K03976	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	tRNA_edit
SX1_k127_5284141_13	1230476.C207_07118	5.946e-39	152.0	2ACCY@1|root,311Y7@2|Bacteria,1N2JB@1224|Proteobacteria,2UDS5@28211|Alphaproteobacteria,3K012@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5284141_0	1297865.APJD01000018_gene5656	3.276e-293	901.0	COG2124@1|root,COG2124@2|Bacteria,1R4B1@1224|Proteobacteria,2U416@28211|Alphaproteobacteria,3JX8M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Cytochrome P450	-	-	-	-	-	-	-	-	-	-	-	-	p450
SX1_k127_5284141_14	1120983.KB894574_gene858	1.83e-38	153.0	COG3916@1|root,COG3916@2|Bacteria,1R87K@1224|Proteobacteria,2U3GS@28211|Alphaproteobacteria	28211|Alphaproteobacteria	QT	Acyl-homoserine-lactone synthase	traI	-	2.3.1.184	ko:K13060	ko00270,ko01100,ko02024,ko02025,map00270,map01100,map02024,map02025	-	R08940	RC00021,RC00039	ko00000,ko00001,ko01000	-	-	-	Autoind_synth
SX1_k127_5284141_5	1297865.APJD01000018_gene5654	6.916e-169	532.0	COG2771@1|root,COG2771@2|Bacteria,1N6UR@1224|Proteobacteria,2TWZ7@28211|Alphaproteobacteria,3JXHC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Autoinducer binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Autoind_bind,GerE
SX1_k127_5284141_11	1297865.APJD01000018_gene5653	8.893e-71	242.0	2A05A@1|root,30N82@2|Bacteria,1RG61@1224|Proteobacteria,2U88B@28211|Alphaproteobacteria,3JZ46@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5284141_3	1297865.APJD01000018_gene5652	1.037e-178	565.0	COG0697@1|root,COG0697@2|Bacteria,1MWSU@1224|Proteobacteria,2TSWT@28211|Alphaproteobacteria,3JT4H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	of the drug metabolite transporter (DMT) superfamily	MA20_03510	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_5284141_6	1297865.APJD01000018_gene5651	2.461e-167	526.0	COG1463@1|root,COG1463@2|Bacteria,1NA4F@1224|Proteobacteria,2TSAH@28211|Alphaproteobacteria,3JWHJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	MlaD protein	-	-	-	-	-	-	-	-	-	-	-	-	MlaD
SX1_k127_5284141_2	1230476.C207_06064	1.458e-255	792.0	COG1304@1|root,COG1304@2|Bacteria,1MUEZ@1224|Proteobacteria,2TQNW@28211|Alphaproteobacteria,3JSRD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	FMN-dependent dehydrogenase	lldD2	-	1.1.2.3,1.1.99.31	ko:K00101,ko:K15054	ko00620,ko00627,ko01100,ko01120,map00620,map00627,map01100,map01120	-	R00196,R04160,R07664	RC00044,RC00240	ko00000,ko00001,ko01000	-	-	-	FMN_dh
SX1_k127_5284141_12	398525.KB900701_gene7719	2.183e-62	216.0	2ERX0@1|root,33JG6@2|Bacteria,1RGSB@1224|Proteobacteria,2U7BY@28211|Alphaproteobacteria,3JZAQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5284141_7	1297865.APJD01000018_gene5648	8.931e-126	403.0	COG1309@1|root,COG1309@2|Bacteria,1R6IU@1224|Proteobacteria,2TUD7@28211|Alphaproteobacteria,3JUNQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_5284141_9	1297865.APJD01000018_gene5647	3.02e-89	295.0	COG5470@1|root,COG5470@2|Bacteria,1RBBV@1224|Proteobacteria,2U5CX@28211|Alphaproteobacteria,3JY7T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF1330)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1330
SX1_k127_5284141_4	1297865.APJD01000018_gene5646	6.328e-178	566.0	28IMV@1|root,2Z8NA@2|Bacteria,1R5B6@1224|Proteobacteria,2TRB5@28211|Alphaproteobacteria,3JS02@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metal dependent phosphohydrolases with conserved 'HD' motif.	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5284192_1	1297865.APJD01000006_gene4447	8.241e-170	541.0	COG2116@1|root,COG2116@2|Bacteria,1MU0W@1224|Proteobacteria,2TTIW@28211|Alphaproteobacteria,3JRBF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Formate/nitrite transporter	MA20_17080	-	-	-	-	-	-	-	-	-	-	-	Form_Nir_trans
SX1_k127_5284192_0	1297865.APJD01000006_gene4448	0.0	1172.0	COG0515@1|root,COG0631@1|root,COG0515@2|Bacteria,COG0631@2|Bacteria,1MV1P@1224|Proteobacteria,2TQTS@28211|Alphaproteobacteria,3JQUJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KLT	Serine/threonine phosphatases, family 2C, catalytic domain	MA20_17085	-	-	-	-	-	-	-	-	-	-	-	PP2C_2,Pkinase
SX1_k127_5284192_3	1297865.APJD01000006_gene4449	2.356e-155	493.0	COG0725@1|root,COG0725@2|Bacteria,1PA2T@1224|Proteobacteria,2U1JI@28211|Alphaproteobacteria,3JUZJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Bacterial extracellular solute-binding protein	-	-	5.3.3.7	ko:K02020,ko:K22003	ko00660,ko02010,map00660,map02010	M00189	R02244	RC00668	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.8	-	-	SBP_bac_11
SX1_k127_5284192_2	1297865.APJD01000006_gene4450	1.43e-155	490.0	COG4553@1|root,COG4553@2|Bacteria,1MVUH@1224|Proteobacteria,2TQXW@28211|Alphaproteobacteria,3JV2J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	PHB de-polymerase C-terminus	MA20_01245	-	3.1.1.75	ko:K05973	ko00650,map00650	-	R05118	-	ko00000,ko00001,ko01000	-	-	-	PHB_depo_C
SX1_k127_5295683_0	883078.HMPREF9695_04935	0.0	1199.0	COG3843@1|root,COG3843@2|Bacteria,1N6J7@1224|Proteobacteria,2TXB7@28211|Alphaproteobacteria,3K6CH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Relaxase/Mobilisation nuclease domain	-	-	-	-	-	-	-	-	-	-	-	-	Relaxase
SX1_k127_5295683_2	883078.HMPREF9695_04936	1.475e-70	242.0	2C8PF@1|root,346NF@2|Bacteria,1RE7H@1224|Proteobacteria,2U91H@28211|Alphaproteobacteria,3JYXH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5295683_1	1197906.CAJQ02000061_gene3807	5.542e-137	437.0	COG1192@1|root,COG1192@2|Bacteria,1R8ZH@1224|Proteobacteria,2U2C1@28211|Alphaproteobacteria,3JUQ9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	VirC1 protein	parA1	-	-	ko:K03496	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	AAA_31,VirC1
SX1_k127_5297747_0	1297865.APJD01000002_gene4104	4.682e-212	662.0	COG0201@1|root,COG0201@2|Bacteria,1MVU7@1224|Proteobacteria,2TQMT@28211|Alphaproteobacteria,3JST3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently	secY	-	-	ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5	-	-	SecY
SX1_k127_5297747_3	1297865.APJD01000002_gene4103	6.132e-91	300.0	COG0200@1|root,COG0200@2|Bacteria,1RDC8@1224|Proteobacteria,2U79D@28211|Alphaproteobacteria,3JSBN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	binds to the 23S rRNA	rplO	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02876	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L27A
SX1_k127_5297747_9	1297865.APJD01000002_gene4102	1.203e-31	124.0	COG1841@1|root,COG1841@2|Bacteria,1PU2S@1224|Proteobacteria,2UF55@28211|Alphaproteobacteria,3K0WI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	ribosomal protein L30	rpmD	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02907	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L30
SX1_k127_5297747_1	1297865.APJD01000002_gene4101	3.312e-114	369.0	COG0098@1|root,COG0098@2|Bacteria,1MUS4@1224|Proteobacteria,2TSRI@28211|Alphaproteobacteria,3JRKJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body	rpsE	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02988	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S5,Ribosomal_S5_C
SX1_k127_5297747_5	398525.KB900701_gene5630	9.521e-63	224.0	COG0256@1|root,COG0256@2|Bacteria,1RGY7@1224|Proteobacteria,2U9A6@28211|Alphaproteobacteria,3JYPE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance	rplR	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904	-	ko:K02881	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L18p
SX1_k127_5297747_6	1297865.APJD01000002_gene4099	3.136e-56	196.0	COG0097@1|root,COG0097@2|Bacteria,1R9YZ@1224|Proteobacteria,2TV09@28211|Alphaproteobacteria,3JS4P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center	rplF	GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02933	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L6
SX1_k127_5297747_8	172088.AUGA01000021_gene5245	5.365e-44	161.0	COG0097@1|root,COG0097@2|Bacteria,1R9YZ@1224|Proteobacteria,2TV09@28211|Alphaproteobacteria,3JS4P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center	rplF	GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02933	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L6
SX1_k127_5297747_4	1297865.APJD01000002_gene4098	8.181e-78	261.0	COG0096@1|root,COG0096@2|Bacteria,1RDG3@1224|Proteobacteria,2U6ZH@28211|Alphaproteobacteria,3JY5V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit	rpsH	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904	-	ko:K02994	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S8
SX1_k127_5297747_7	1297865.APJD01000002_gene4097	1.862e-54	192.0	COG0199@1|root,COG0199@2|Bacteria,1MZDT@1224|Proteobacteria,2UC01@28211|Alphaproteobacteria,3JZGR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site	rpsN	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02954	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S14
SX1_k127_5297747_2	1297865.APJD01000002_gene4096	2.499e-108	351.0	COG0094@1|root,COG0094@2|Bacteria,1MUU9@1224|Proteobacteria,2TQPF@28211|Alphaproteobacteria,3JTZ9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits	rplE	GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02931	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L5,Ribosomal_L5_C
SX1_k127_5302842_0	1297865.APJD01000007_gene1791	0.0	1039.0	COG2721@1|root,COG2721@2|Bacteria,1MU9V@1224|Proteobacteria,2U0QN@28211|Alphaproteobacteria,3JUSN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	D-galactarate dehydratase / Altronate hydrolase, C terminus	garD	-	4.2.1.42	ko:K01708	ko00053,map00053	-	R05608	RC00543	ko00000,ko00001,ko01000	-	-	-	GD_AH_C,SAF
SX1_k127_5310262_1	1297865.APJD01000005_gene3646	9.939e-253	779.0	COG4303@1|root,COG4303@2|Bacteria,1MUR4@1224|Proteobacteria,2TTNA@28211|Alphaproteobacteria,3JSC5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Ethanolamine ammonia lyase large subunit (EutB)	MA20_16105	-	4.3.1.7	ko:K03735	ko00564,ko01100,map00564,map01100	-	R00749	RC00370	ko00000,ko00001,ko01000	-	-	-	EutB
SX1_k127_5310262_0	1230476.C207_05596	0.0	1064.0	COG1032@1|root,COG1032@2|Bacteria,1MY2Y@1224|Proteobacteria,2TUIT@28211|Alphaproteobacteria,3JUXS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Domain of unknown function (DUF4070)	MA20_16100	-	-	-	-	-	-	-	-	-	-	-	B12-binding,DUF4070,Radical_SAM
SX1_k127_5310262_2	1297865.APJD01000005_gene3648	7.523e-160	506.0	COG4302@1|root,COG4302@2|Bacteria,1MWQI@1224|Proteobacteria,2U5EU@28211|Alphaproteobacteria,3JUDK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the EutC family	eutC	GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0008144,GO:0009350,GO:0019842,GO:0031419,GO:0032991,GO:0036094,GO:0044424,GO:0044464,GO:0046906,GO:0048037,GO:0097159,GO:1901363,GO:1902494	4.3.1.7	ko:K03736	ko00564,ko01100,map00564,map01100	-	R00749	RC00370	ko00000,ko00001,ko01000	-	-	-	EutC
SX1_k127_5310262_3	1297865.APJD01000005_gene3649	8.379e-36	137.0	COG1033@1|root,COG1033@2|Bacteria,1MUE1@1224|Proteobacteria,2TRI9@28211|Alphaproteobacteria,3JR7Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	MMPL family	MA20_16090	-	-	ko:K07003	-	-	-	-	ko00000	-	-	-	MMPL
SX1_k127_5313492_0	1297865.APJD01000014_gene517	2.249e-294	905.0	COG0243@1|root,COG0243@2|Bacteria,1MU6B@1224|Proteobacteria,2TTUX@28211|Alphaproteobacteria,3JUJ5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family	-	-	-	-	-	-	-	-	-	-	-	-	Molybdopterin,Molydop_binding
SX1_k127_5313492_4	1297865.APJD01000014_gene516	5.744e-133	423.0	COG3506@1|root,COG3506@2|Bacteria,1R7MF@1224|Proteobacteria,2U3WE@28211|Alphaproteobacteria,3JXEP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1349)	-	-	-	ko:K09702	-	-	-	-	ko00000	-	-	-	DUF1349
SX1_k127_5313492_3	1297865.APJD01000014_gene515	3.681e-158	504.0	COG2267@1|root,COG2267@2|Bacteria,1MX0N@1224|Proteobacteria	1224|Proteobacteria	I	Alpha beta hydrolase	catD	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_4,Abhydrolase_6,SnoaL_2
SX1_k127_5313492_1	1297865.APJD01000014_gene514	1.939e-169	533.0	COG1414@1|root,COG1414@2|Bacteria	2|Bacteria	K	Transcriptional regulator	-	-	-	ko:K13641	-	-	-	-	ko00000,ko03000	-	-	-	HTH_IclR,IclR
SX1_k127_5313492_2	1297865.APJD01000014_gene513	1.097e-166	525.0	COG1024@1|root,COG1024@2|Bacteria,1PU1Q@1224|Proteobacteria,2TSW6@28211|Alphaproteobacteria,3JUKI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	MA20_27400	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_5313492_6	1297865.APJD01000014_gene512	1.852e-108	352.0	COG2050@1|root,COG2050@2|Bacteria,1RK46@1224|Proteobacteria,2U29Q@28211|Alphaproteobacteria,3JW02@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Domain of unknown function (DUF4442)	MA20_27405	-	-	-	-	-	-	-	-	-	-	-	4HBT
SX1_k127_5313492_5	1297865.APJD01000014_gene511	3.254e-123	396.0	COG1309@1|root,COG1309@2|Bacteria,1N1Q3@1224|Proteobacteria,2TVF4@28211|Alphaproteobacteria,3JQVY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	ko:K16137	-	-	-	-	ko00000,ko03000	-	-	-	TetR_N
SX1_k127_5313492_7	1297865.APJD01000014_gene510	8.241e-41	150.0	COG0583@1|root,COG0583@2|Bacteria,1MWVB@1224|Proteobacteria,2TQXV@28211|Alphaproteobacteria,3JSNI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR family	MA20_27415	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_5327506_5	1297865.APJD01000012_gene1381	4.687e-35	138.0	COG1897@1|root,COG1897@2|Bacteria,1MV64@1224|Proteobacteria,2TQUF@28211|Alphaproteobacteria,3K16I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Homoserine O-succinyltransferase	metAA	-	2.3.1.46	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	M00017	R01777	RC00004,RC00041	ko00000,ko00001,ko00002,ko01000	-	-	-	HTS
SX1_k127_5327506_1	1297865.APJD01000012_gene1380	6.466e-244	754.0	COG1902@1|root,COG1902@2|Bacteria,1MVE0@1224|Proteobacteria,2TQPY@28211|Alphaproteobacteria,3JRQ8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NADH:flavin oxidoreductase / NADH oxidase family	MA20_39895	-	1.6.99.1	ko:K00354	-	-	R00282	RC00001	ko00000,ko01000	-	-	-	Oxidored_FMN
SX1_k127_5327506_2	1297865.APJD01000012_gene1379	9.551e-220	683.0	COG4246@1|root,COG4246@2|Bacteria,1N7Y1@1224|Proteobacteria,2TTZW@28211|Alphaproteobacteria,3JTKP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Esterase-like activity of phytase	-	-	-	-	-	-	-	-	-	-	-	-	Phytase-like
SX1_k127_5327506_0	1297865.APJD01000012_gene1378	0.0	1245.0	COG4547@1|root,COG4547@2|Bacteria,1MX11@1224|Proteobacteria,2TS4N@28211|Alphaproteobacteria,3JRPW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Cobalamin biosynthesis protein CobT VWA domain	cobT	-	6.6.1.2	ko:K09883	ko00860,ko01100,map00860,map01100	-	R05227	RC02000	ko00000,ko00001,ko01000	-	-	-	CobT,CobT_C
SX1_k127_5327506_4	1297865.APJD01000012_gene1377	9.99e-85	280.0	COG0454@1|root,COG0456@2|Bacteria,1N6QA@1224|Proteobacteria,2UFGS@28211|Alphaproteobacteria,3JYH5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_7
SX1_k127_5327506_3	1297865.APJD01000012_gene1376	1.357e-219	681.0	COG0714@1|root,COG0714@2|Bacteria,1MXIW@1224|Proteobacteria,2TS1Z@28211|Alphaproteobacteria,3JS1D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Cobaltochelatase CobS subunit N terminal	cobS	-	6.6.1.2	ko:K09882	ko00860,ko01100,map00860,map01100	-	R05227	RC02000	ko00000,ko00001,ko01000	-	-	-	AAA_5,CbbQ_C,CobS_N
SX1_k127_5334399_4	1356854.N007_00900	6.049e-29	122.0	COG0583@1|root,COG0583@2|Bacteria,1TP6T@1239|Firmicutes,4HC4T@91061|Bacilli,278VB@186823|Alicyclobacillaceae	91061|Bacilli	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_5334399_2	1230476.C207_05825	1.278e-82	276.0	2EHAM@1|root,33B2H@2|Bacteria,1RAIW@1224|Proteobacteria,2U5TZ@28211|Alphaproteobacteria,3JY03@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5334399_3	1297865.APJD01000004_gene5340	8.826e-48	173.0	2DNGD@1|root,32XCZ@2|Bacteria,1RJW1@1224|Proteobacteria,2U9RF@28211|Alphaproteobacteria,3JZJE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5334399_0	1297865.APJD01000004_gene5339	2.721e-209	653.0	COG2038@1|root,COG2038@2|Bacteria,1MVAM@1224|Proteobacteria,2TQS6@28211|Alphaproteobacteria,3JSIN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB)	cobT	GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.4.2.21	ko:K00768	ko00860,ko01100,map00860,map01100	M00122	R04148	RC00033,RC00063	ko00000,ko00001,ko00002,ko01000	-	-	-	DBI_PRT
SX1_k127_5334399_1	1297865.APJD01000004_gene5338	2.344e-108	352.0	COG0368@1|root,COG0368@2|Bacteria,1RHCC@1224|Proteobacteria,2U97D@28211|Alphaproteobacteria,3JUE6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate	cobS	-	2.7.8.26	ko:K02233	ko00860,ko01100,map00860,map01100	M00122	R05223,R11174	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	CobS
SX1_k127_5334504_1	1297865.APJD01000010_gene4867	5.271e-220	682.0	COG2271@1|root,COG2271@2|Bacteria,1MX4V@1224|Proteobacteria,2U6FF@28211|Alphaproteobacteria,3JWSX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	uhpC	-	-	ko:K02445	-	-	-	-	ko00000,ko02000	2.A.1.4.3	-	-	MFS_1
SX1_k127_5334504_0	1297865.APJD01000010_gene4868	8.662e-282	867.0	COG2271@1|root,COG2271@2|Bacteria,1MVPS@1224|Proteobacteria,2TTHW@28211|Alphaproteobacteria,3JT33@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	PFAM Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_5334504_2	1297865.APJD01000010_gene4869	2.001e-164	518.0	COG3473@1|root,COG3473@2|Bacteria,1MU9Z@1224|Proteobacteria,2TYFG@28211|Alphaproteobacteria,3JU0U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Asp/Glu/Hydantoin racemase	-	-	5.2.1.1	ko:K01799	ko00650,ko00760,ko01120,map00650,map00760,map01120	M00622	R01087	RC00448	ko00000,ko00001,ko00002,ko01000	-	-	-	Asp_Glu_race
SX1_k127_5334504_3	1297865.APJD01000010_gene4870	2.227e-10	61.0	COG1802@1|root,COG1802@2|Bacteria,1N7GE@1224|Proteobacteria,2U49F@28211|Alphaproteobacteria,3JX9F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FCD	-	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SX1_k127_5339791_1	1297865.APJD01000007_gene2262	2.964e-258	801.0	COG0145@1|root,COG0145@2|Bacteria,1MU2Y@1224|Proteobacteria,2TQZ6@28211|Alphaproteobacteria,3JSA9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EQ	Hydantoinase/oxoprolinase	-	-	3.5.2.14	ko:K01473	ko00330,ko01100,map00330,map01100	-	R03187	RC00632	ko00000,ko00001,ko01000	-	-	-	Hydant_A_N,Hydantoinase_A
SX1_k127_5339791_0	1297865.APJD01000007_gene2261	0.0	1131.0	COG0146@1|root,COG0146@2|Bacteria,1QU46@1224|Proteobacteria,2TVYU@28211|Alphaproteobacteria,3JRW4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EQ	Hydantoinase B/oxoprolinase	-	-	3.5.2.14	ko:K01474	ko00330,ko01100,map00330,map01100	-	R03187	RC00632	ko00000,ko00001,ko01000	-	-	-	Hydantoinase_B
SX1_k127_5339791_2	1297865.APJD01000007_gene2260	9.527e-253	784.0	COG0477@1|root,COG2814@2|Bacteria,1QUY6@1224|Proteobacteria,2TWZ0@28211|Alphaproteobacteria,3JQS0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_5339791_5	1297865.APJD01000007_gene2259	1.261e-188	591.0	28JPA@1|root,2Z9FC@2|Bacteria,1PN1F@1224|Proteobacteria,2TSKX@28211|Alphaproteobacteria,3JT6R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5339791_4	1297865.APJD01000007_gene2258	1.781e-195	610.0	COG0715@1|root,COG0715@2|Bacteria,1MV9S@1224|Proteobacteria,2TUP0@28211|Alphaproteobacteria,3JWK4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NMT1-like family	-	-	-	ko:K15553	ko00920,ko02010,map00920,map02010	M00436	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.17.2	-	-	NMT1,NMT1_2
SX1_k127_5339791_3	1297865.APJD01000007_gene2257	1.347e-237	736.0	COG2141@1|root,COG2141@2|Bacteria,1MX4E@1224|Proteobacteria,2TSGA@28211|Alphaproteobacteria,3JV02@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	1.14.14.5	ko:K04091	ko00920,map00920	-	R07210,R10206	RC01779,RC02556	ko00000,ko00001,ko01000	-	-	-	Bac_luciferase
SX1_k127_5339791_6	1297865.APJD01000007_gene2256	2.648e-14	72.0	COG1960@1|root,COG1960@2|Bacteria,1MW97@1224|Proteobacteria,2TUS1@28211|Alphaproteobacteria,3JRWA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	Acyl-CoA_dh_2,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_5341134_0	1297865.APJD01000004_gene5379	0.0	1338.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JS7F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Efflux pump membrane transporter	MA20_18040	-	-	ko:K18138,ko:K18146	ko01501,ko01503,map01501,map01503	M00647,M00649,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	2.A.6.2,2.A.6.2.40	-	-	ACR_tran
SX1_k127_5341134_1	1297865.APJD01000004_gene5380	7.072e-236	734.0	COG0845@1|root,COG0845@2|Bacteria,1MU78@1224|Proteobacteria,2TSW4@28211|Alphaproteobacteria,3JRWE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	MA20_18045	-	-	ko:K03585	ko01501,ko01503,map01501,map01503	M00646,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000,ko03036	2.A.6.2,8.A.1.6	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
SX1_k127_5342870_2	1297865.APJD01000005_gene3770	3.557e-66	225.0	COG0438@1|root,COG0438@2|Bacteria,1R4NX@1224|Proteobacteria,2U1EN@28211|Alphaproteobacteria,3JXK2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_trans_4_4,Glycos_transf_1
SX1_k127_5342870_1	1297865.APJD01000005_gene3769	6.952e-163	513.0	COG0500@1|root,COG0500@2|Bacteria,1R7BN@1224|Proteobacteria,2U50R@28211|Alphaproteobacteria,3JUW7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Nodulation protein S (NodS)	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_23
SX1_k127_5342870_0	1297865.APJD01000005_gene3768	1.379e-213	664.0	COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,1MVI9@1224|Proteobacteria,2TT1Y@28211|Alphaproteobacteria,3JRJB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K16554	ko05111,map05111	-	-	-	ko00000,ko00001,ko02000	8.A.3.1	-	-	AAA_31,GNVR,Wzz
SX1_k127_5351293_5	1121022.ABENE_06100	3.203e-51	185.0	COG0155@1|root,COG0155@2|Bacteria,1MVVB@1224|Proteobacteria,2TRCR@28211|Alphaproteobacteria,2KG66@204458|Caulobacterales	204458|Caulobacterales	C	Sulfite reductase	-	-	1.8.1.2	ko:K00381	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00176	R00858	RC00065	ko00000,ko00001,ko00002,ko01000	-	-	-	NIR_SIR,NIR_SIR_ferr
SX1_k127_5351293_4	1297865.APJD01000011_gene6863	9.258e-108	349.0	COG3749@1|root,COG3749@2|Bacteria,1RJR9@1224|Proteobacteria,2UDH7@28211|Alphaproteobacteria,3JY89@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bacterial protein of unknown function (DUF934)	MA20_18215	-	-	-	-	-	-	-	-	-	-	-	DUF934
SX1_k127_5351293_3	1297865.APJD01000011_gene6864	7.117e-144	466.0	COG0175@1|root,COG0175@2|Bacteria,1MXUR@1224|Proteobacteria,2U5AP@28211|Alphaproteobacteria,3JSI2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Reduction of activated sulfate into sulfite	cysH	-	1.8.4.10,1.8.4.8	ko:K00390	ko00920,ko01100,ko01120,map00920,map01100,map01120	M00176	R02021	RC00007,RC02862	ko00000,ko00001,ko00002,ko01000	-	-	-	PAPS_reduct
SX1_k127_5351293_0	1297865.APJD01000011_gene6865	5.813e-214	664.0	COG1613@1|root,COG1613@2|Bacteria,1MUAU@1224|Proteobacteria,2TT52@28211|Alphaproteobacteria,3JRVZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Bacterial extracellular solute-binding protein	sbp	-	-	ko:K02048	ko00920,ko02010,map00920,map02010	M00185	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.6.1,3.A.1.6.3	-	-	SBP_bac_11
SX1_k127_5351293_2	1297865.APJD01000011_gene6866	5.961e-157	501.0	COG0555@1|root,COG0555@2|Bacteria,1QTTU@1224|Proteobacteria,2TTET@28211|Alphaproteobacteria,3JT44@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Binding-protein-dependent transport system inner membrane component	cysT	-	-	ko:K02046	ko00920,ko02010,map00920,map02010	M00185	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.6.1,3.A.1.6.3	-	-	BPD_transp_1
SX1_k127_5351293_1	1297865.APJD01000011_gene6867	8.456e-189	592.0	COG4208@1|root,COG4208@2|Bacteria,1MV8X@1224|Proteobacteria,2TQR8@28211|Alphaproteobacteria,3JQT1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Binding-protein-dependent transport system inner membrane component	cysW	-	-	ko:K02047	ko00920,ko02010,map00920,map02010	M00185	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.6.1,3.A.1.6.3	-	-	BPD_transp_1
SX1_k127_5371713_1	1297865.APJD01000011_gene6530	1.963e-175	550.0	COG2130@1|root,COG2130@2|Bacteria,1MUC2@1224|Proteobacteria,2TQYM@28211|Alphaproteobacteria,3JSWX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	N-terminal domain of oxidoreductase	MA20_40260	-	-	ko:K07119	-	-	-	-	ko00000	-	-	-	ADH_N_2,ADH_zinc_N
SX1_k127_5371713_0	1297865.APJD01000011_gene6529	0.0	1655.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JRGX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	AcrB/AcrD/AcrF family	MA20_01135	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
SX1_k127_5409391_1	1297865.APJD01000001_gene5905	1.159e-152	483.0	COG1509@1|root,COG1509@2|Bacteria,1MUPJ@1224|Proteobacteria,2TT31@28211|Alphaproteobacteria,3JQS7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Lysine-2,3-aminomutase	kamA	-	5.4.3.2	ko:K01843	ko00310,map00310	-	R00461	RC00303	ko00000,ko00001,ko01000	-	-	-	Fer4_12,Fer4_14,LAM_C,Radical_SAM
SX1_k127_5409391_0	1297865.APJD01000001_gene5906	1.015e-229	711.0	COG2269@1|root,COG2269@2|Bacteria,1MU97@1224|Proteobacteria,2TRD4@28211|Alphaproteobacteria,3JRU7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	tRNA synthetases class II (D, K and N)	genX	-	-	ko:K04568	-	-	-	-	ko00000,ko01000,ko03012	-	-	-	tRNA-synt_2
SX1_k127_5409391_3	1297865.APJD01000001_gene5907	2.417e-112	373.0	COG0231@1|root,COG0231@2|Bacteria,1MW2J@1224|Proteobacteria,2TUWE@28211|Alphaproteobacteria,3JQUE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase	efp	GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576	-	ko:K02356	-	-	-	-	ko00000,ko03012	-	-	-	EFP,EFP_N,Elong-fact-P_C
SX1_k127_5409391_2	398525.KB900701_gene4755	4.916e-145	463.0	COG0739@1|root,COG0739@2|Bacteria,1QGHU@1224|Proteobacteria,2TUF9@28211|Alphaproteobacteria,3JR95@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	COG0739 Membrane proteins related to metalloendopeptidases	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M23
SX1_k127_5412673_0	1297865.APJD01000011_gene6851	6.854e-110	356.0	COG0628@1|root,COG0628@2|Bacteria,1MXXU@1224|Proteobacteria,2TVPN@28211|Alphaproteobacteria,3JQWE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	AI-2E family transporter	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
SX1_k127_5412673_2	1297865.APJD01000011_gene6850	4.858e-68	233.0	COG4575@1|root,COG4575@2|Bacteria,1RHUR@1224|Proteobacteria,2UAZ1@28211|Alphaproteobacteria,3JZGI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bacterial protein of unknown function (DUF883)	MA20_18275	-	-	-	-	-	-	-	-	-	-	-	DUF883
SX1_k127_5412673_1	1297865.APJD01000011_gene6849	6.216e-77	261.0	2A6RI@1|root,30VJP@2|Bacteria,1RA9C@1224|Proteobacteria,2U5GJ@28211|Alphaproteobacteria,3JY22@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	Phage_holin_3_6
SX1_k127_5412673_3	1297865.APJD01000011_gene6848	4.06e-66	228.0	2A849@1|root,30X50@2|Bacteria,1RFJ0@1224|Proteobacteria,2U7CP@28211|Alphaproteobacteria,3JZ4C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5413758_3	1297865.APJD01000007_gene2340	1.629e-204	638.0	COG3485@1|root,COG3485@2|Bacteria,1MX7W@1224|Proteobacteria,2TT8T@28211|Alphaproteobacteria,3JRKQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	MA20_17090	-	1.13.11.37	ko:K04098	ko00361,ko00362,ko01100,ko01120,map00361,map00362,map01100,map01120	-	R03891,R04061	RC00388,RC01016	ko00000,ko00001,ko01000	-	-	-	Dioxygenase_C,Dioxygenase_N
SX1_k127_5413758_1	1230476.C207_02501	2.776e-275	848.0	COG1680@1|root,COG1680@2|Bacteria,1MVPR@1224|Proteobacteria,2TRWZ@28211|Alphaproteobacteria,3JQWG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase	MA20_17095	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SX1_k127_5413758_0	1297865.APJD01000007_gene2338	3.929e-315	970.0	COG3920@1|root,COG3920@2|Bacteria,1NU8D@1224|Proteobacteria,2U0N4@28211|Alphaproteobacteria,3JQZW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	HWE histidine kinase	-	-	2.1.1.80,3.1.1.61	ko:K13924	ko02020,ko02030,map02020,map02030	M00506	-	-	ko00000,ko00001,ko00002,ko01000,ko02022,ko02035	-	-	-	HWE_HK,PAS_9,dCache_1
SX1_k127_5413758_2	1297865.APJD01000007_gene2337	7.622e-265	818.0	COG1301@1|root,COG1301@2|Bacteria,1MU0Q@1224|Proteobacteria,2TRET@28211|Alphaproteobacteria,3JTMT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family	-	-	-	ko:K03309,ko:K11103	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.23,2.A.23.1.3,2.A.23.1.6,2.A.23.1.7	-	-	SDF
SX1_k127_5413758_6	1297865.APJD01000007_gene2336	1.017e-44	166.0	29CCX@1|root,2ZZBD@2|Bacteria,1MZTJ@1224|Proteobacteria,2UCRB@28211|Alphaproteobacteria,3K0C0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5413758_4	114615.BRADO2463	1.084e-71	243.0	COG1396@1|root,COG1396@2|Bacteria,1RDBW@1224|Proteobacteria,2U7CY@28211|Alphaproteobacteria,3JY0P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Cro/C1-type HTH DNA-binding domain	QU41_21520	-	-	-	-	-	-	-	-	-	-	-	HTH_3
SX1_k127_5413758_5	1297865.APJD01000007_gene2334	6.626e-55	199.0	29CMP@1|root,2ZZJY@2|Bacteria,1N0QN@1224|Proteobacteria,2UCPN@28211|Alphaproteobacteria,3K0CR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5416408_6	1297865.APJD01000005_gene3854	1.014e-31	123.0	COG1432@1|root,COG1432@2|Bacteria,1MX5C@1224|Proteobacteria,2TRE6@28211|Alphaproteobacteria,3JT11@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	OST-HTH/LOTUS domain	MA20_15040	-	-	-	-	-	-	-	-	-	-	-	NYN,OST-HTH
SX1_k127_5416408_5	1297865.APJD01000005_gene3855	2.087e-67	233.0	COG3103@1|root,COG4991@2|Bacteria,1RDIS@1224|Proteobacteria,2U7QS@28211|Alphaproteobacteria,3JYXF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Protein of unknown function (DUF1236)	MA20_15015	-	-	-	-	-	-	-	-	-	-	-	DUF1236
SX1_k127_5416408_0	1297865.APJD01000005_gene3856	1.108e-231	718.0	COG1893@1|root,COG1893@2|Bacteria,1MVZ1@1224|Proteobacteria,2TRJN@28211|Alphaproteobacteria,3JWE8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Ketopantoate reductase PanE/ApbA C terminal	-	-	1.1.1.169	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	M00119	R02472	RC00726	ko00000,ko00001,ko00002,ko01000	-	-	-	ApbA,ApbA_C
SX1_k127_5416408_2	1297865.APJD01000005_gene3857	1.542e-123	400.0	COG0028@1|root,COG0028@2|Bacteria,1R6QP@1224|Proteobacteria,2TUEF@28211|Alphaproteobacteria,3JT5U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain	MA20_15005	-	4.1.1.79	ko:K13039	ko00680,ko01120,map00680,map01120	M00358	R05774	RC00506	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C
SX1_k127_5416408_3	1297865.APJD01000005_gene3858	3.706e-111	361.0	COG4032@1|root,COG4032@2|Bacteria,1R53S@1224|Proteobacteria,2TT20@28211|Alphaproteobacteria,3JTZJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain	MA20_15000	-	4.1.1.79	ko:K06034	ko00680,ko01120,map00680,map01120	M00358	R05774	RC00506	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_N
SX1_k127_5416408_1	1297865.APJD01000005_gene3859	6.877e-205	638.0	COG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2TQWK@28211|Alphaproteobacteria,3JW1B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter family receptor	-	-	-	-	-	-	-	-	-	-	-	-	TctC
SX1_k127_5416408_4	398525.KB900701_gene3896	6.004e-80	267.0	COG3618@1|root,COG3618@2|Bacteria,1N2QM@1224|Proteobacteria,2TTZK@28211|Alphaproteobacteria,3JSFK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_2
SX1_k127_5418866_4	1230476.C207_03675	4.812e-176	554.0	COG5607@1|root,COG5607@2|Bacteria,1R678@1224|Proteobacteria,2TTJQ@28211|Alphaproteobacteria,3JRFF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	CHAD	-	-	-	-	-	-	-	-	-	-	-	-	CHAD
SX1_k127_5418866_1	1297865.APJD01000007_gene2218	8.747e-265	818.0	COG0659@1|root,COG0659@2|Bacteria,1MVWV@1224|Proteobacteria,2TUH6@28211|Alphaproteobacteria,3JUYP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Sulfate transporter	-	-	-	ko:K03321	-	-	-	-	ko00000,ko02000	2.A.53.3	-	-	STAS,Sulfate_transp
SX1_k127_5418866_2	1297865.APJD01000007_gene2217	1.816e-207	648.0	COG1609@1|root,COG1609@2|Bacteria,1MUEP@1224|Proteobacteria,2TQM4@28211|Alphaproteobacteria,3JXQM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn _helix lactose operon repressor	-	-	-	-	-	-	-	-	-	-	-	-	LacI,Peripla_BP_1,Peripla_BP_3
SX1_k127_5418866_3	1297865.APJD01000007_gene2216	4.526e-192	604.0	COG5285@1|root,COG5285@2|Bacteria,1MWD5@1224|Proteobacteria,2TWPJ@28211|Alphaproteobacteria,3JVXM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Phytanoyl-CoA dioxygenase (PhyH)	-	-	-	-	-	-	-	-	-	-	-	-	PhyH
SX1_k127_5418866_0	1297865.APJD01000007_gene2215	7.141e-288	886.0	COG0477@1|root,COG0477@2|Bacteria,1MU46@1224|Proteobacteria,2TQVP@28211|Alphaproteobacteria,3JRCZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	-	-	-	ko:K08173	-	-	-	-	ko00000,ko02000	2.A.1.6	-	-	MFS_1,Sugar_tr
SX1_k127_5418866_5	1297865.APJD01000007_gene2214	5.976e-61	210.0	COG1082@1|root,COG1082@2|Bacteria,1R4JM@1224|Proteobacteria,2TREG@28211|Alphaproteobacteria,3JU6Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Xylose isomerase domain protein TIM barrel	-	-	-	-	-	-	-	-	-	-	-	-	AP_endonuc_2
SX1_k127_542098_1	1230476.C207_04250	2.944e-170	534.0	COG2935@1|root,COG2935@2|Bacteria,1MW62@1224|Proteobacteria,2TQY8@28211|Alphaproteobacteria,3JUT3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate	ate	GO:0003674,GO:0003824,GO:0004057,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016598,GO:0016740,GO:0016746,GO:0016755,GO:0019538,GO:0019941,GO:0030163,GO:0036211,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575	2.3.2.29	ko:K21420	-	-	R11547,R11548	RC00064	ko00000,ko01000	-	-	-	ATE_C,ATE_N
SX1_k127_542098_0	1230476.C207_04249	2.646e-261	809.0	COG1914@1|root,COG1914@2|Bacteria,1MW6X@1224|Proteobacteria,2TUTC@28211|Alphaproteobacteria,3JQY1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	H( )-stimulated, divalent metal cation uptake system	mntH	GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0042221,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281	-	ko:K03322	-	-	-	-	ko00000,ko02000	2.A.55.2.6,2.A.55.3	-	-	Nramp
SX1_k127_542098_2	398525.KB900701_gene5372	5.767e-16	78.0	COG1842@1|root,COG1842@2|Bacteria,1NB0D@1224|Proteobacteria,2TV06@28211|Alphaproteobacteria,3JVAQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KT	PspA/IM30 family	MA20_29850	-	-	ko:K03969	-	-	-	-	ko00000	-	-	-	PspA_IM30
SX1_k127_5434223_1	1297865.APJD01000014_gene984	4.011e-83	276.0	COG0789@1|root,COG0789@2|Bacteria,1RH2U@1224|Proteobacteria,2U73A@28211|Alphaproteobacteria,3JYFT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, mercury resistance	soxR	-	-	ko:K13639	-	-	-	-	ko00000,ko03000	-	-	-	MerR,MerR-DNA-bind,MerR_1
SX1_k127_5434223_2	398525.KB900701_gene6015	2.738e-46	167.0	COG2261@1|root,COG2261@2|Bacteria,1N88H@1224|Proteobacteria,2UFV9@28211|Alphaproteobacteria,3K0MS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Transglycosylase associated protein	-	-	-	-	-	-	-	-	-	-	-	-	Transgly_assoc
SX1_k127_5434223_0	1297865.APJD01000014_gene986	0.0	1202.0	COG0046@1|root,COG0046@2|Bacteria,1MYN4@1224|Proteobacteria,2TRGM@28211|Alphaproteobacteria,3JRAU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL	purL	-	6.3.5.3	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04463	RC00010,RC01160	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRS,AIRS_C
SX1_k127_5434556_6	1297865.APJD01000019_gene3195	2.832e-111	362.0	COG0221@1|root,COG0221@2|Bacteria,1RA2F@1224|Proteobacteria,2TQZM@28211|Alphaproteobacteria,3JR9D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions	ppa	-	3.6.1.1	ko:K01507	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	-	-	-	Pyrophosphatase
SX1_k127_5434556_7	1230476.C207_04100	1.19e-107	349.0	COG1247@1|root,COG1247@2|Bacteria,1QU6B@1224|Proteobacteria,2TW1F@28211|Alphaproteobacteria,3JSZM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	FR47-like protein	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,FR47
SX1_k127_5434556_9	1297865.APJD01000019_gene3197	9.672e-91	302.0	COG5528@1|root,COG5528@2|Bacteria,1RDUE@1224|Proteobacteria,2U7HT@28211|Alphaproteobacteria,3JYA7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Predicted integral membrane protein (DUF2269)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2269
SX1_k127_5434556_4	1297865.APJD01000019_gene3198	1.685e-273	852.0	COG0702@1|root,COG0702@2|Bacteria,1MZ0C@1224|Proteobacteria,2TSBI@28211|Alphaproteobacteria,3JQMF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	GM	DoxX-like family	-	-	-	-	-	-	-	-	-	-	-	-	DoxX_3,Epimerase,NAD_binding_10
SX1_k127_5434556_8	1297865.APJD01000019_gene3199	4.518e-98	325.0	COG3011@1|root,COG3011@2|Bacteria,1N0YV@1224|Proteobacteria,2U5MD@28211|Alphaproteobacteria,3JY5Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	Protein of unknown function, DUF393	-	-	-	-	-	-	-	-	-	-	-	-	DUF393
SX1_k127_5434556_3	1297865.APJD01000019_gene3200	2.983e-277	852.0	COG1231@1|root,COG1231@2|Bacteria,1MUPQ@1224|Proteobacteria,2TRVT@28211|Alphaproteobacteria,3JSB0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Flavin containing amine oxidoreductase	-	-	1.4.3.4	ko:K00274	ko00260,ko00330,ko00340,ko00350,ko00360,ko00380,ko00950,ko00982,ko01100,ko01110,ko04726,ko04728,ko05030,ko05031,ko05034,map00260,map00330,map00340,map00350,map00360,map00380,map00950,map00982,map01100,map01110,map04726,map04728,map05030,map05031,map05034	M00135	R02173,R02382,R02529,R02532,R02613,R02908,R02919,R04025,R04300,R04674,R04890,R04893,R04894,R04907,R04908,R08346,R08347,R08348,R11354	RC00062,RC00160,RC00225,RC00676,RC00807,RC00808,RC01808,RC02226,RC02713	ko00000,ko00001,ko00002,ko01000	-	-	-	Amino_oxidase
SX1_k127_5434556_0	1297865.APJD01000019_gene3201	0.0	1199.0	COG1217@1|root,COG1217@2|Bacteria,1MV5Q@1224|Proteobacteria,2TR63@28211|Alphaproteobacteria,3JTCG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	GTP-binding protein TypA	typA	GO:0000027,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006996,GO:0008150,GO:0009266,GO:0009408,GO:0009409,GO:0009628,GO:0009987,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071826,GO:0071840	-	ko:K06207	-	-	-	-	ko00000	-	-	-	EFG_C,GTP_EFTU,GTP_EFTU_D2
SX1_k127_5434556_11	224911.27348412	0.0002327	51.0	2978Y@1|root,2ZUGP@2|Bacteria,1RD02@1224|Proteobacteria,2U7VP@28211|Alphaproteobacteria,3JZ2X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5434556_5	1297865.APJD01000019_gene3202	7.133e-159	501.0	COG0664@1|root,COG0664@2|Bacteria,1NEQM@1224|Proteobacteria,2TQXG@28211|Alphaproteobacteria,3JQVG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Crp-like helix-turn-helix domain	MA20_25280	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2
SX1_k127_5434556_10	1297865.APJD01000019_gene3203	1.244e-73	250.0	COG0784@1|root,COG0784@2|Bacteria,1RHY5@1224|Proteobacteria,2U818@28211|Alphaproteobacteria,3K5X8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	cheY-homologous receiver domain	-	-	-	-	-	-	-	-	-	-	-	-	Response_reg
SX1_k127_5434556_1	1297865.APJD01000019_gene3204	0.0	1090.0	COG3540@1|root,COG3540@2|Bacteria,1MWAF@1224|Proteobacteria,2TS7J@28211|Alphaproteobacteria,3JV4Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	PhoD-like phosphatase	MA20_25290	-	3.1.3.1	ko:K01113	ko00790,ko01100,ko02020,map00790,map01100,map02020	M00126	R04620	RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	PhoD,PhoD_N
SX1_k127_5434556_2	1297865.APJD01000019_gene3205	3.393e-278	856.0	COG2358@1|root,COG2358@2|Bacteria,1N6K6@1224|Proteobacteria,2TTP7@28211|Alphaproteobacteria,3JRR7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	NMT1-like family	-	-	-	-	-	-	-	-	-	-	-	-	NMT1_3
SX1_k127_5440791_1	1297865.APJD01000009_gene2768	3.511e-218	679.0	COG4773@1|root,COG4773@2|Bacteria,1QTT0@1224|Proteobacteria,2TQSQ@28211|Alphaproteobacteria,3JQP4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SX1_k127_5440791_5	1297865.APJD01000009_gene2769	1.463e-42	157.0	2BVK6@1|root,33CZG@2|Bacteria,1N03P@1224|Proteobacteria,2UC04@28211|Alphaproteobacteria,3K05K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5440791_3	1297865.APJD01000009_gene2770	4.317e-135	431.0	COG1309@1|root,COG1309@2|Bacteria,1R83W@1224|Proteobacteria,2U6AB@28211|Alphaproteobacteria,3JYEV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_5440791_0	1297865.APJD01000009_gene2771	0.0	1774.0	COG1529@1|root,COG2080@1|root,COG1529@2|Bacteria,COG2080@2|Bacteria,1MUEA@1224|Proteobacteria,2TWGU@28211|Alphaproteobacteria,3JQT8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	aldehyde oxidase and xanthine dehydrogenase, a b hammerhead	-	-	1.17.1.4	ko:K11177	ko00230,ko01100,ko01120,map00230,map01100,map01120	M00546	R01768,R02103	RC00143	ko00000,ko00001,ko00002,ko01000	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2,Fer2,Fer2_2
SX1_k127_5440791_2	1297865.APJD01000009_gene2772	1.946e-185	605.0	COG1319@1|root,COG1319@2|Bacteria,1R3XA@1224|Proteobacteria,2TUC4@28211|Alphaproteobacteria,3JW8Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CO dehydrogenase flavoprotein C-terminal domain	-	-	1.17.1.4	ko:K11178	ko00230,ko01100,ko01120,map00230,map01100,map01120	M00546	R01768,R02103	RC00143	ko00000,ko00001,ko00002,ko01000	-	-	-	CO_deh_flav_C,FAD_binding_5
SX1_k127_5440791_4	1297865.APJD01000009_gene2773	2.811e-68	233.0	COG1280@1|root,COG1280@2|Bacteria,1MXAI@1224|Proteobacteria,2TSWP@28211|Alphaproteobacteria,3JRZ8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	LysE type translocator	-	-	-	-	-	-	-	-	-	-	-	-	LysE
SX1_k127_5441981_1	398525.KB900701_gene6259	2.646e-130	417.0	COG1414@1|root,COG1414@2|Bacteria,1Q7BI@1224|Proteobacteria,2TUY4@28211|Alphaproteobacteria,3JRXR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial transcriptional regulator	MA20_00685	-	-	-	-	-	-	-	-	-	-	-	HTH_IclR,IclR
SX1_k127_5441981_0	1297865.APJD01000047_gene4819	0.0	1150.0	COG1053@1|root,COG1053@2|Bacteria,1MURY@1224|Proteobacteria,2TSRQ@28211|Alphaproteobacteria,3JS1F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	FAD binding domain	MA20_00690	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_2
SX1_k127_5447174_0	1297865.APJD01000005_gene3655	0.0	1292.0	COG1657@1|root,COG1657@2|Bacteria,1MUIP@1224|Proteobacteria,2TRF3@28211|Alphaproteobacteria,3JRDS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Squalene-hopene cyclase C-terminal domain	shc	-	4.2.1.129,5.4.99.17	ko:K06045	ko00909,ko01110,map00909,map01110	-	R07322,R07323	RC01850,RC01851	ko00000,ko00001,ko01000	-	-	-	SQHop_cyclase_C,SQHop_cyclase_N
SX1_k127_5465075_8	1297865.APJD01000003_gene6505	6.1e-29	115.0	COG1853@1|root,COG1853@2|Bacteria,1RGYM@1224|Proteobacteria,2UCHI@28211|Alphaproteobacteria,3JRDM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Flavin reductase like domain	-	-	-	-	-	-	-	-	-	-	-	-	Flavin_Reduct
SX1_k127_5465075_0	1297865.APJD01000003_gene6506	9.582e-268	824.0	COG0683@1|root,COG0683@2|Bacteria,1MV1Z@1224|Proteobacteria,2TRTD@28211|Alphaproteobacteria,3JS33@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_5465075_9	1037409.BJ6T_14340	1.725e-12	71.0	COG1961@1|root,COG1961@2|Bacteria,1MWCZ@1224|Proteobacteria,2TRIY@28211|Alphaproteobacteria,3JUGV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Resolvase	-	-	-	-	-	-	-	-	-	-	-	-	Recombinase,Resolvase,Zn_ribbon_recom
SX1_k127_5465075_3	1297865.APJD01000004_gene5407	6.404e-103	340.0	COG1495@1|root,COG1495@2|Bacteria,1N89I@1224|Proteobacteria,2UF49@28211|Alphaproteobacteria,3JUXI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Disulfide bond formation protein DsbB	dsbB	-	-	ko:K03611	-	-	-	-	ko00000,ko03110	5.A.2.1	-	-	DsbB
SX1_k127_5465075_1	1297865.APJD01000004_gene5406	7.506e-212	660.0	COG3180@1|root,COG3180@2|Bacteria,1MUFS@1224|Proteobacteria,2TUUX@28211|Alphaproteobacteria,3JRDZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Transition state regulatory protein AbrB	MA20_20750	-	-	ko:K07120	-	-	-	-	ko00000	-	-	-	AbrB
SX1_k127_5465075_7	1297865.APJD01000004_gene5405	4.437e-43	164.0	2ACMA@1|root,3127Q@2|Bacteria,1N34P@1224|Proteobacteria,2UG1Z@28211|Alphaproteobacteria,3K0GT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	psiF repeat	-	-	-	-	-	-	-	-	-	-	-	-	PsiF_repeat
SX1_k127_5465075_6	1230476.C207_02638	1.508e-86	288.0	2CVYT@1|root,32SYQ@2|Bacteria,1R8QZ@1224|Proteobacteria,2U3KI@28211|Alphaproteobacteria,3JU9W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_20740	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5465075_2	1297865.APJD01000004_gene5403	1.327e-110	359.0	COG1309@1|root,COG1309@2|Bacteria,1R59A@1224|Proteobacteria,2U08S@28211|Alphaproteobacteria,3JVKD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	MA20_20735	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_5465075_5	1297865.APJD01000004_gene5402	6.218e-91	299.0	COG0824@1|root,COG0824@2|Bacteria,1N8J9@1224|Proteobacteria,2UHEA@28211|Alphaproteobacteria,3JY8Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Thioesterase-like superfamily	-	-	-	ko:K07107	-	-	-	-	ko00000,ko01000	-	-	-	4HBT,4HBT_2
SX1_k127_5465075_4	1297865.APJD01000004_gene5401	1.793e-91	310.0	COG2050@1|root,COG2050@2|Bacteria,1RGVD@1224|Proteobacteria,2U9MH@28211|Alphaproteobacteria,3JY97@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Thioesterase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	4HBT
SX1_k127_546719_1	1297865.APJD01000005_gene3980	0.0	1163.0	COG3210@1|root,COG3210@2|Bacteria,1MXIP@1224|Proteobacteria,2TTVB@28211|Alphaproteobacteria,3JS9Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	haemagglutination activity domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF3739,Glug,Haemagg_act
SX1_k127_546719_3	1297865.APJD01000005_gene3981	0.0	1105.0	COG0747@1|root,COG0747@2|Bacteria,1MWBH@1224|Proteobacteria,2TTF4@28211|Alphaproteobacteria,3JW5C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Bacterial extracellular solute-binding proteins, family 5 Middle	-	-	-	ko:K02035	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	SBP_bac_5
SX1_k127_546719_6	1297865.APJD01000005_gene3982	2.135e-275	847.0	COG1680@1|root,COG1680@2|Bacteria,1P3SQ@1224|Proteobacteria,2U0E0@28211|Alphaproteobacteria,3JS2D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SX1_k127_546719_11	1297865.APJD01000005_gene3983	4.858e-144	456.0	COG2197@1|root,COG2197@2|Bacteria,1PFF2@1224|Proteobacteria,2U10X@28211|Alphaproteobacteria,3JUPT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, Lux Regulon	-	-	-	-	-	-	-	-	-	-	-	-	GerE
SX1_k127_546719_4	1297865.APJD01000005_gene3984	0.0	1051.0	COG0405@1|root,COG0405@2|Bacteria,1MUV6@1224|Proteobacteria,2TQWP@28211|Alphaproteobacteria,3JS58@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Gamma-glutamyltranspeptidase	-	-	2.3.2.2,3.4.19.13	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	-	R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935	RC00064,RC00090,RC00096	ko00000,ko00001,ko01000,ko01002	-	-	-	G_glu_transpept
SX1_k127_546719_2	1297865.APJD01000005_gene3985	0.0	1131.0	COG1574@1|root,COG1574@2|Bacteria,1MWP2@1224|Proteobacteria,2TTRU@28211|Alphaproteobacteria,3JV01@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_3
SX1_k127_546719_7	1297865.APJD01000005_gene3986	1.575e-233	724.0	COG0523@1|root,COG0523@2|Bacteria,1MVZV@1224|Proteobacteria,2TS4B@28211|Alphaproteobacteria,3JW7D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Cobalamin synthesis protein cobW C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	CobW_C,cobW
SX1_k127_546719_5	1297865.APJD01000005_gene3987	9.225e-297	910.0	COG0683@1|root,COG0683@2|Bacteria,1N0MT@1224|Proteobacteria,2TUMI@28211|Alphaproteobacteria,3JS0N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_546719_10	1297865.APJD01000005_gene3988	1.715e-166	526.0	COG0411@1|root,COG0411@2|Bacteria,1MUFT@1224|Proteobacteria,2U22X@28211|Alphaproteobacteria,3JS0B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ATPases associated with a variety of cellular activities	-	-	-	ko:K01995	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_546719_13	1218076.BAYB01000002_gene500	2.875e-75	259.0	COG0410@1|root,COG0410@2|Bacteria,1MVVC@1224|Proteobacteria,2W8Y0@28216|Betaproteobacteria,1K85C@119060|Burkholderiaceae	28216|Betaproteobacteria	E	ATPases associated with a variety of cellular activities	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran
SX1_k127_546719_9	1297865.APJD01000005_gene3990	1.007e-169	535.0	COG0559@1|root,COG0559@2|Bacteria,1P3FU@1224|Proteobacteria,2U0D7@28211|Alphaproteobacteria,3JXW9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	-	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_546719_8	1297865.APJD01000005_gene3991	1.145e-200	632.0	COG4177@1|root,COG4177@2|Bacteria,1NY9G@1224|Proteobacteria,2TTSN@28211|Alphaproteobacteria,3JT7P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	-	-	-	ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_546719_0	1297865.APJD01000005_gene3992	0.0	1365.0	COG3733@1|root,COG3733@2|Bacteria,1MW7W@1224|Proteobacteria,2TUWM@28211|Alphaproteobacteria,3JTB2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Copper amine oxidase, N3 domain	tynA	-	1.4.3.21	ko:K00276	ko00260,ko00350,ko00360,ko00410,ko00950,ko00960,ko01100,ko01110,map00260,map00350,map00360,map00410,map00950,map00960,map01100,map01110	-	R02382,R02529,R02613,R03139,R04027,R04300,R06154,R06740	RC00062,RC00189,RC00676,RC01052	ko00000,ko00001,ko01000	-	-	-	Cu_amine_oxid,Cu_amine_oxidN2,Cu_amine_oxidN3
SX1_k127_546719_14	172088.AUGA01000014_gene2982	1.553e-36	145.0	2ADJ3@1|root,3139F@2|Bacteria,1N61Z@1224|Proteobacteria,2UCT6@28211|Alphaproteobacteria,3K0QT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_546719_12	1297865.APJD01000005_gene3994	9.526e-92	302.0	COG0161@1|root,COG0161@2|Bacteria,1MU2N@1224|Proteobacteria,2TQND@28211|Alphaproteobacteria,3JQS8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	-	-	2.6.1.55	ko:K15372	ko00410,ko00430,ko01100,map00410,map00430,map01100	-	R00908,R01684	RC00006,RC00062	ko00000,ko00001,ko01000	-	-	-	Aminotran_3
SX1_k127_5486708_11	1297865.APJD01000014_gene584	6.616e-110	355.0	COG0405@1|root,COG0405@2|Bacteria,1MUV6@1224|Proteobacteria,2TR49@28211|Alphaproteobacteria,3JRE0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Gamma-glutamyltranspeptidase	ggt	GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006082,GO:0006508,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0019538,GO:0019752,GO:0030288,GO:0030313,GO:0031975,GO:0034722,GO:0036374,GO:0042597,GO:0043094,GO:0043102,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0070011,GO:0071704,GO:0097264,GO:0140096,GO:1901564,GO:1901566,GO:1901576	2.3.2.2,3.4.19.13	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	-	R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935	RC00064,RC00090,RC00096	ko00000,ko00001,ko01000,ko01002	-	-	-	G_glu_transpept
SX1_k127_5486708_14	1230476.C207_06454	8.216e-65	227.0	2AA5D@1|root,30ZEC@2|Bacteria,1RKMT@1224|Proteobacteria,2U9ZI@28211|Alphaproteobacteria,3JZQ7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5486708_2	1297865.APJD01000014_gene582	0.0	1684.0	COG5009@1|root,COG5009@2|Bacteria,1MU5A@1224|Proteobacteria,2USBB@28211|Alphaproteobacteria,3JV26@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Penicillin-binding protein OB-like domain	mrcA	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	PCB_OB,Transgly,Transpeptidase
SX1_k127_5486708_7	1297865.APJD01000014_gene581	4.833e-209	655.0	COG2207@1|root,COG2207@2|Bacteria,1Q1II@1224|Proteobacteria,2TUE0@28211|Alphaproteobacteria,3JS0J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding_2,HTH_18
SX1_k127_5486708_13	1297865.APJD01000014_gene579	5.189e-84	279.0	COG0454@1|root,COG0456@2|Bacteria,1RKJA@1224|Proteobacteria,2U6F2@28211|Alphaproteobacteria,3JYAR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_10
SX1_k127_5486708_6	1297865.APJD01000014_gene578	5.639e-221	690.0	COG2140@1|root,COG2140@2|Bacteria,1MUZA@1224|Proteobacteria,2TTMU@28211|Alphaproteobacteria,3JTKQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Cupin	oxdD	-	4.1.1.2	ko:K01569	ko00630,ko01100,map00630,map01100	-	R00522	RC00321	ko00000,ko00001,ko01000	-	-	-	Cupin_1
SX1_k127_5486708_5	1297865.APJD01000014_gene577	2.613e-226	705.0	COG0834@1|root,COG0834@2|Bacteria,1NN6F@1224|Proteobacteria,2TSA4@28211|Alphaproteobacteria,3JVI5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	ET	Ligand-gated ion channel	-	-	-	-	-	-	-	-	-	-	-	-	Ion_trans_2,Lig_chan,SBP_bac_3
SX1_k127_5486708_9	1297865.APJD01000014_gene576	1.527e-130	417.0	COG1309@1|root,COG1309@2|Bacteria,1MYVX@1224|Proteobacteria,2U4K5@28211|Alphaproteobacteria,3JS4A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_5486708_3	1297865.APJD01000014_gene575	0.0	1616.0	COG3119@1|root,COG3119@2|Bacteria,1MV92@1224|Proteobacteria,2TTXG@28211|Alphaproteobacteria,3JVJZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Sulfatase	-	-	3.1.6.1	ko:K01130	ko00140,ko00600,map00140,map00600	-	R03980,R04856	RC00128,RC00231	ko00000,ko00001,ko01000	-	-	-	Sulfatase
SX1_k127_5486708_10	1297865.APJD01000014_gene574	7.501e-112	362.0	COG5342@1|root,COG5342@2|Bacteria,1R6BT@1224|Proteobacteria,2U1ZG@28211|Alphaproteobacteria,3JTCZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Invasion associated locus B (IalB) protein	ialB	-	-	-	-	-	-	-	-	-	-	-	IalB
SX1_k127_5486708_0	1297865.APJD01000014_gene573	0.0	1985.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JQMT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family	MA20_27115	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
SX1_k127_5486708_4	1297865.APJD01000014_gene572	2.204e-233	725.0	COG0845@1|root,COG0845@2|Bacteria,1MW65@1224|Proteobacteria,2TSB6@28211|Alphaproteobacteria,3JR4W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	MA20_27120	-	-	ko:K07799,ko:K18990	ko02020,map02020	M00648,M00720	-	-	ko00000,ko00001,ko00002,ko02000	2.A.6.2.30,8.A.1	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
SX1_k127_5486708_12	1297865.APJD01000014_gene571	5.201e-88	293.0	COG1846@1|root,COG1846@2|Bacteria,1MZY5@1224|Proteobacteria,2U7EH@28211|Alphaproteobacteria,3JYT3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR
SX1_k127_5486708_16	398525.KB900701_gene4317	1.618e-41	154.0	2FCZ8@1|root,3451W@2|Bacteria,1MZPY@1224|Proteobacteria,2UC7N@28211|Alphaproteobacteria,3K06U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_27125	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5486708_1	1297865.APJD01000014_gene569	0.0	1699.0	COG4774@1|root,COG4774@2|Bacteria,1MV0X@1224|Proteobacteria,2TTQD@28211|Alphaproteobacteria,3JUT0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K16090	-	-	-	-	ko00000,ko02000	1.B.14.1.11	-	-	Plug,TonB_dep_Rec
SX1_k127_5486708_8	1230476.C207_06826	1.352e-130	449.0	COG3128@1|root,COG3128@2|Bacteria,1MUI7@1224|Proteobacteria,2TRH2@28211|Alphaproteobacteria,3JUZG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PKHD-type hydroxylase	MA20_27135	GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0033554,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0098771	1.14.11.2	ko:K00472,ko:K07336	ko00330,ko01100,map00330,map01100	-	R01252	RC00478	ko00000,ko00001,ko01000	-	-	-	2OG-FeII_Oxy_3
SX1_k127_5494282_13	1297865.APJD01000001_gene5849	4.734e-118	385.0	COG0172@1|root,COG0172@2|Bacteria,1MUJF@1224|Proteobacteria,2TR4T@28211|Alphaproteobacteria,3JRG5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)	serS	-	6.1.1.11	ko:K01875	ko00970,map00970	M00359,M00360	R03662,R08218	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Seryl_tRNA_N,tRNA-synt_2b
SX1_k127_5494282_12	1297865.APJD01000001_gene5850	8.787e-157	497.0	COG0805@1|root,COG0805@2|Bacteria,1MVAY@1224|Proteobacteria,2TTIX@28211|Alphaproteobacteria,3JRJG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides	tatC	-	-	ko:K03118	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	TatC
SX1_k127_5494282_14	1297865.APJD01000001_gene5851	5.598e-98	323.0	COG1826@1|root,COG1826@2|Bacteria,1N73F@1224|Proteobacteria,2UF4Z@28211|Alphaproteobacteria,3JVG6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation	tatB	GO:0003674,GO:0005215	-	ko:K03117	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	MttA_Hcf106
SX1_k127_5494282_18	1230476.C207_01454	9.202e-41	152.0	COG1826@1|root,COG1826@2|Bacteria,1NGDP@1224|Proteobacteria,2UFBN@28211|Alphaproteobacteria,3K08F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system	tatA	GO:0003674,GO:0005215	-	ko:K03116	ko03060,ko03070,map03060,map03070	M00336	-	-	ko00000,ko00001,ko00002,ko02044	2.A.64	-	-	MttA_Hcf106
SX1_k127_5494282_9	1297865.APJD01000001_gene5853	3.826e-168	534.0	COG1386@1|root,COG1386@2|Bacteria,1PUA6@1224|Proteobacteria,2TU64@28211|Alphaproteobacteria,3JUGS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves	scpB	-	-	ko:K06024	-	-	-	-	ko00000,ko03036	-	-	-	SMC_ScpB
SX1_k127_5494282_11	1297865.APJD01000001_gene5854	1.839e-167	527.0	COG1354@1|root,COG1354@2|Bacteria,1MVCN@1224|Proteobacteria,2TS1V@28211|Alphaproteobacteria,3JR69@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves	scpA	-	-	ko:K05896	-	-	-	-	ko00000,ko03036	-	-	-	SMC_ScpA
SX1_k127_5494282_7	1297865.APJD01000001_gene5855	7.567e-216	671.0	COG1472@1|root,COG1472@2|Bacteria,1MVAJ@1224|Proteobacteria,2TRJK@28211|Alphaproteobacteria,3JRM6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Glycosyl hydrolase family 3 N terminal domain	nagZ	-	3.2.1.21,3.2.1.52	ko:K01207,ko:K05349	ko00460,ko00500,ko00520,ko00531,ko00940,ko01100,ko01110,ko01501,map00460,map00500,map00520,map00531,map00940,map01100,map01110,map01501	M00628	R00022,R00026,R02558,R02887,R02985,R03527,R04949,R04998,R05963,R07809,R07810,R10035,R10039,R10040,R10831	RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248	ko00000,ko00001,ko00002,ko01000	-	GH3	-	Glyco_hydro_3
SX1_k127_5494282_4	1297865.APJD01000001_gene5856	6.773e-309	949.0	COG3115@1|root,COG3115@2|Bacteria,1RE0F@1224|Proteobacteria,2TWI2@28211|Alphaproteobacteria,3JTB5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Sporulation related domain	-	-	-	-	-	-	-	-	-	-	-	-	SPOR
SX1_k127_5494282_1	1297865.APJD01000001_gene5857	0.0	1174.0	COG0018@1|root,COG0018@2|Bacteria,1MU4J@1224|Proteobacteria,2TS3Y@28211|Alphaproteobacteria,3JUHD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Arginyl-tRNA synthetase	argS	-	6.1.1.19	ko:K01887	ko00970,map00970	M00359,M00360	R03646	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029	-	-	-	Arg_tRNA_synt_N,DALR_1,tRNA-synt_1d
SX1_k127_5494282_5	1297865.APJD01000001_gene5858	8.529e-265	815.0	COG0232@1|root,COG0232@2|Bacteria,1MVQ2@1224|Proteobacteria,2TRCD@28211|Alphaproteobacteria,3JT2W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Belongs to the dGTPase family. Type 2 subfamily	dgt	GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576	3.1.5.1	ko:K01129	ko00230,map00230	-	R01856	RC00017	ko00000,ko00001,ko01000	-	-	-	HD,HD_assoc
SX1_k127_5494282_17	1230476.C207_01447	2.956e-62	216.0	COG0316@1|root,COG0316@2|Bacteria,1RHCW@1224|Proteobacteria,2UBR8@28211|Alphaproteobacteria,3JZKF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the HesB IscA family	erpA	-	-	ko:K13628,ko:K15724	-	-	-	-	ko00000,ko03016	-	-	-	Fe-S_biosyn
SX1_k127_5494282_0	1297865.APJD01000001_gene5860	0.0	1967.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JWEN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	MMPL family	mdtC	-	-	ko:K03296	-	-	-	-	ko00000	2.A.6.2	-	-	ACR_tran
SX1_k127_5494282_6	1297865.APJD01000001_gene5861	8.738e-220	686.0	COG0845@1|root,COG0845@2|Bacteria,1MW65@1224|Proteobacteria,2TV9W@28211|Alphaproteobacteria,3JWYC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Biotin-lipoyl like	-	-	-	ko:K07799	ko02020,map02020	M00648	-	-	ko00000,ko00001,ko00002,ko02000	8.A.1	-	-	Biotin_lipoyl_2,HlyD_D23
SX1_k127_5494282_15	1297865.APJD01000001_gene5862	8.45e-87	287.0	COG2153@1|root,COG2153@2|Bacteria,1MZ86@1224|Proteobacteria,2V84Y@28211|Alphaproteobacteria,3JZ9G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_10
SX1_k127_5494282_8	1297865.APJD01000001_gene5863	8.149e-179	559.0	COG0708@1|root,COG0708@2|Bacteria,1MVII@1224|Proteobacteria,2TR5J@28211|Alphaproteobacteria,3JRXJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	exodeoxyribonuclease III	xth	-	3.1.11.2	ko:K01142	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Exo_endo_phos
SX1_k127_5494282_10	1297865.APJD01000001_gene5864	1.537e-167	530.0	COG0790@1|root,COG0790@2|Bacteria,1MUGD@1224|Proteobacteria,2TRV0@28211|Alphaproteobacteria,3JQQJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sel1-like repeats.	exoR	-	-	ko:K07126	-	-	-	-	ko00000	-	-	-	Sel1
SX1_k127_5494282_2	172088.AUGA01000029_gene1904	0.0	1153.0	COG0129@1|root,COG0129@2|Bacteria,1MUTQ@1224|Proteobacteria,2TRTQ@28211|Alphaproteobacteria,3JTGH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the IlvD Edd family	ilvD	GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836	4.2.1.9	ko:K01687	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R01209,R04441,R05070	RC00468,RC01714	ko00000,ko00001,ko00002,ko01000	-	-	-	ILVD_EDD
SX1_k127_5494282_3	1297865.APJD01000001_gene5866	0.0	1000.0	COG2199@1|root,COG3706@2|Bacteria,1MZV7@1224|Proteobacteria,2TZSN@28211|Alphaproteobacteria,3JUPP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	PAS fold	-	-	-	-	-	-	-	-	-	-	-	-	GGDEF,PAS_4,PAS_7,PAS_9
SX1_k127_5494282_19	1297865.APJD01000001_gene5868	1.298e-15	76.0	2AGPC@1|root,316WX@2|Bacteria,1PY4F@1224|Proteobacteria,2UWU6@28211|Alphaproteobacteria,3K5P1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PEP-CTERM motif	-	-	-	-	-	-	-	-	-	-	-	-	VPEP
SX1_k127_5519318_3	1297865.APJD01000036_gene1543	2.939e-20	89.0	COG0683@1|root,COG0683@2|Bacteria,1MWH7@1224|Proteobacteria,2TS8K@28211|Alphaproteobacteria,3JUFA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein domain	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_5519318_1	1297865.APJD01000036_gene1542	1.492e-188	591.0	COG0559@1|root,COG0559@2|Bacteria,1MVND@1224|Proteobacteria,2TSCF@28211|Alphaproteobacteria,3JW0E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	MA20_09930	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_5519318_0	1297865.APJD01000036_gene1541	7.364e-270	831.0	COG4177@1|root,COG4177@2|Bacteria,1MY3V@1224|Proteobacteria,2U0TU@28211|Alphaproteobacteria,3JU2T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	-	-	-	ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_5519318_2	398525.KB900701_gene2565	7.395e-38	142.0	COG0411@1|root,COG0411@2|Bacteria,1MX51@1224|Proteobacteria,2VEYC@28211|Alphaproteobacteria,3JTAQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid ATP-binding cassette transporter	MA20_09940	-	-	ko:K01995	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_5531507_6	1297865.APJD01000019_gene3291	2.413e-126	405.0	COG0074@1|root,COG0074@2|Bacteria,1MUGA@1224|Proteobacteria,2TQKB@28211|Alphaproteobacteria,3JRGB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit	sucD	-	6.2.1.5	ko:K01902	ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00173,M00374,M00620	R00405,R02404	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000	-	-	-	CoA_binding,Ligase_CoA
SX1_k127_5531507_0	1297865.APJD01000019_gene3292	0.0	2034.0	COG0567@1|root,COG0567@2|Bacteria,1MVBF@1224|Proteobacteria,2TRBQ@28211|Alphaproteobacteria,3JRD5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	E1 component	sucA	-	1.2.4.2	ko:K00164	ko00020,ko00310,ko00380,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map00380,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00032	R00621,R01933,R01940,R03316,R08549	RC00004,RC00027,RC00627,RC02743,RC02833,RC02883	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxogl_dehyd_N,E1_dh,OxoGdeHyase_C,Transket_pyr
SX1_k127_5531507_3	1297865.APJD01000019_gene3293	1.711e-262	813.0	COG0508@1|root,COG0508@2|Bacteria,1MUJD@1224|Proteobacteria,2TS5N@28211|Alphaproteobacteria,3JR1I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2)	sucB	-	2.3.1.61	ko:K00658	ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00032	R02570,R02571,R08549	RC00004,RC02727,RC02833	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	2-oxoacid_dh,Biotin_lipoyl,E3_binding
SX1_k127_5531507_5	1297865.APJD01000019_gene3294	4.433e-152	482.0	COG1028@1|root,COG1028@2|Bacteria,1MW9A@1224|Proteobacteria,2TRFW@28211|Alphaproteobacteria,3JQVV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	ygfF	-	1.1.1.47	ko:K00034	ko00030,ko01120,ko01200,map00030,map01120,map01200	-	R01520,R01521	RC00066	ko00000,ko00001,ko01000	-	-	-	adh_short_C2
SX1_k127_5531507_2	1297865.APJD01000019_gene3295	2.87e-299	921.0	COG1249@1|root,COG1249@2|Bacteria,1MU2U@1224|Proteobacteria,2TRN7@28211|Alphaproteobacteria,3JSW1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	lpdA	GO:0000166,GO:0003674,GO:0003824,GO:0004148,GO:0005488,GO:0005507,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009507,GO:0009536,GO:0010035,GO:0010038,GO:0016020,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0017076,GO:0019866,GO:0030554,GO:0030964,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045271,GO:0046686,GO:0046872,GO:0046914,GO:0048046,GO:0050896,GO:0050897,GO:0055114,GO:0070469,GO:0097159,GO:0097367,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204	1.8.1.4	ko:K00382	ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200	M00009,M00011,M00036,M00307,M00532	R00209,R01221,R01698,R03815,R07618,R08549	RC00004,RC00022,RC00583,RC02742,RC02833,RC02834	br01601,ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Pyr_redox_2,Pyr_redox_dim
SX1_k127_5531507_9	172088.AUGA01000067_gene6883	0.0001351	46.0	COG2267@1|root,COG2267@2|Bacteria,1RCQT@1224|Proteobacteria,2U67H@28211|Alphaproteobacteria,3JYA0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Alpha/beta hydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_6
SX1_k127_5531507_8	1297865.APJD01000019_gene3296	2.539e-107	349.0	2DC8Y@1|root,32TZ7@2|Bacteria,1Q7ZX@1224|Proteobacteria,2TT5D@28211|Alphaproteobacteria,3JVFY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5531507_7	1230476.C207_04659	8.663e-108	352.0	2BNSJ@1|root,32HG4@2|Bacteria,1MV5R@1224|Proteobacteria,2U1AN@28211|Alphaproteobacteria,3JTG0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF4337)	MA20_43880	-	-	-	-	-	-	-	-	-	-	-	DUF4337
SX1_k127_5531507_4	1297865.APJD01000019_gene3298	5.36e-205	640.0	COG4973@1|root,COG4973@2|Bacteria,1MUJJ@1224|Proteobacteria,2TVZJ@28211|Alphaproteobacteria,3JRCV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Belongs to the 'phage' integrase family. XerC subfamily	xerC	-	-	ko:K03733	-	-	-	-	ko00000,ko03036	-	-	-	Phage_int_SAM_1,Phage_integrase
SX1_k127_5531507_1	172088.AUGA01000018_gene2208	0.0	1315.0	COG1198@1|root,COG1198@2|Bacteria,1MUUZ@1224|Proteobacteria,2TQTQ@28211|Alphaproteobacteria,3JSST@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA	priA	-	-	ko:K04066	ko03440,map03440	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	DEAD,Helicase_C
SX1_k127_553313_4	1297865.APJD01000006_gene4556	2.825e-85	282.0	COG3795@1|root,COG3795@2|Bacteria,1N32U@1224|Proteobacteria,2UFVV@28211|Alphaproteobacteria,3JYW1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	YCII-related domain	-	-	-	-	-	-	-	-	-	-	-	-	YCII
SX1_k127_553313_0	1297865.APJD01000006_gene4557	2.619e-258	798.0	COG4941@1|root,COG4941@2|Bacteria,1MU3D@1224|Proteobacteria,2TSNH@28211|Alphaproteobacteria,3JTNF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Sigma-70 region 2	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
SX1_k127_553313_2	1230476.C207_03447	2.337e-181	568.0	COG3023@1|root,COG3023@2|Bacteria,1RDHU@1224|Proteobacteria,2TSW3@28211|Alphaproteobacteria,3JSSX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	N-acetylmuramoyl-L-alanine amidase (Family 2)	amiD	-	3.5.1.28	ko:K01447,ko:K03806	-	-	R04112	RC00064,RC00141	ko00000,ko01000,ko01011	-	-	-	Amidase_2,PG_binding_1
SX1_k127_553313_1	1297865.APJD01000006_gene4559	1.876e-204	642.0	COG0275@1|root,COG0275@2|Bacteria,1MUT4@1224|Proteobacteria,2TRQA@28211|Alphaproteobacteria,3JT8T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA	rsmH	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.199	ko:K03438	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Methyltransf_5
SX1_k127_553313_5	1297865.APJD01000006_gene4560	6.282e-84	286.0	COG5462@1|root,COG5462@2|Bacteria,1RBGN@1224|Proteobacteria,2U75N@28211|Alphaproteobacteria,3JY94@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	secreted (periplasmic) protein	MA20_01770	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_553313_3	1297865.APJD01000006_gene4561	2.368e-138	443.0	COG0768@1|root,COG0768@2|Bacteria,1MUNY@1224|Proteobacteria,2TSHQ@28211|Alphaproteobacteria,3JSUN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Penicillin-binding Protein	ftsI	-	3.4.16.4	ko:K03587	ko00550,ko01501,map00550,map01501	-	-	-	ko00000,ko00001,ko01000,ko01011,ko03036	-	-	-	PBP_dimer,Transpeptidase
SX1_k127_5534381_1	1297865.APJD01000002_gene4057	1.716e-212	661.0	COG0654@1|root,COG0654@2|Bacteria,1R7KI@1224|Proteobacteria,2TV6E@28211|Alphaproteobacteria,3JTN0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	FAD binding domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3
SX1_k127_5534381_2	1297865.APJD01000002_gene4058	1.837e-125	404.0	COG1309@1|root,COG1309@2|Bacteria,1RI95@1224|Proteobacteria,2UBCM@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	Bacterial transcriptional repressor C-terminal	-	-	-	-	-	-	-	-	-	-	-	-	TetR_C_11,TetR_N
SX1_k127_5534381_0	1297865.APJD01000002_gene4059	8.558e-250	773.0	COG0624@1|root,COG0624@2|Bacteria,1MVBR@1224|Proteobacteria,2TRUK@28211|Alphaproteobacteria,3JTX1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Peptidase dimerisation domain	MA20_31020	-	3.5.1.16	ko:K01438	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	M00028,M00845	R00669,R09107	RC00064,RC00300	ko00000,ko00001,ko00002,ko01000	-	-	-	M20_dimer,Peptidase_M20
SX1_k127_5543398_5	1297865.APJD01000005_gene3797	1.936e-161	509.0	COG1004@1|root,COG1004@2|Bacteria,1MW5U@1224|Proteobacteria,2TREV@28211|Alphaproteobacteria,3JTIE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the UDP-glucose GDP-mannose dehydrogenase family	rkpK	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	1.1.1.22	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	M00014,M00129,M00361,M00362	R00286	RC00291	ko00000,ko00001,ko00002,ko01000	-	-	-	UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N
SX1_k127_5543398_3	1297865.APJD01000005_gene3796	1.324e-192	604.0	COG1091@1|root,COG1091@2|Bacteria,1MUXM@1224|Proteobacteria,2TSP6@28211|Alphaproteobacteria,3JU6G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose	rfbD	-	1.1.1.133	ko:K00067	ko00521,ko00523,ko01130,map00521,map00523,map01130	M00793	R02777	RC00182	ko00000,ko00001,ko00002,ko01000	-	-	-	RmlD_sub_bind
SX1_k127_5543398_7	1297865.APJD01000005_gene3795	1.545e-122	392.0	COG1898@1|root,COG1898@2|Bacteria,1R9YD@1224|Proteobacteria,2U7G8@28211|Alphaproteobacteria,3JRZ5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose	rfbC	-	5.1.3.13	ko:K01790	ko00521,ko00523,ko01130,map00521,map00523,map01130	M00793	R06514	RC01531	ko00000,ko00001,ko00002,ko01000	-	-	-	dTDP_sugar_isom
SX1_k127_5543398_4	1038860.AXAP01000134_gene6928	1.52e-168	532.0	COG1209@1|root,COG1209@2|Bacteria,1MU0X@1224|Proteobacteria,2TQPI@28211|Alphaproteobacteria,3JTWF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis	rfbA	-	2.7.7.24	ko:K00973	ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130	M00793	R02328	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	NTP_transferase
SX1_k127_5543398_1	1297865.APJD01000005_gene3793	3.307e-241	750.0	COG1088@1|root,COG1088@2|Bacteria,1MU5E@1224|Proteobacteria,2TT5T@28211|Alphaproteobacteria,3JRQ2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily	rfbB	-	4.2.1.46	ko:K01710	ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130	M00793	R06513	RC00402	ko00000,ko00001,ko00002,ko01000	-	-	-	GDP_Man_Dehyd
SX1_k127_5543398_6	1297865.APJD01000005_gene3792	8.847e-124	399.0	COG3914@1|root,COG3914@2|Bacteria,1RE54@1224|Proteobacteria,2U5XB@28211|Alphaproteobacteria,3JZSU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	O-linked N-acetylglucosamine transferase SPINDLY family	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5543398_0	1297865.APJD01000005_gene3791	2.262e-245	761.0	COG0463@1|root,COG0463@2|Bacteria,1MXQB@1224|Proteobacteria,2U2SY@28211|Alphaproteobacteria,3JQVU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Glycosyltransferase family 92	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_tranf_2_4,Glyco_transf_92
SX1_k127_5543398_2	1297865.APJD01000005_gene3790	3.583e-221	690.0	2E5MX@1|root,330CT@2|Bacteria,1QB6R@1224|Proteobacteria,2U53Q@28211|Alphaproteobacteria,3JX8N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5545502_4	1297865.APJD01000014_gene993	8.032e-142	451.0	COG4700@1|root,COG4700@2|Bacteria,1R577@1224|Proteobacteria,2TU7Z@28211|Alphaproteobacteria,3JW2W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	PLDc_N,TPR_16,TPR_19,TPR_4
SX1_k127_5545502_1	1297865.APJD01000014_gene992	9.191e-197	617.0	COG0697@1|root,COG0697@2|Bacteria,1MXX1@1224|Proteobacteria,2TQN0@28211|Alphaproteobacteria,3JTCS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	MA20_09090	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_5545502_6	1297865.APJD01000014_gene991	7.991e-77	257.0	COG1733@1|root,COG1733@2|Bacteria,1RJHM@1224|Proteobacteria,2UAM5@28211|Alphaproteobacteria,3JZV4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	HxlR-like helix-turn-helix	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
SX1_k127_5545502_2	1297865.APJD01000014_gene990	2.938e-146	465.0	COG0625@1|root,COG0625@2|Bacteria,1R401@1224|Proteobacteria,2U0SE@28211|Alphaproteobacteria,3JXN9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, C-terminal domain	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_2,GST_C_3,GST_N_2,GST_N_3
SX1_k127_5545502_0	1230476.C207_00669	0.0	1411.0	COG1524@1|root,COG1524@2|Bacteria,1PBW4@1224|Proteobacteria,2TSJA@28211|Alphaproteobacteria,3JSNU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Type I phosphodiesterase / nucleotide pyrophosphatase	-	-	-	-	-	-	-	-	-	-	-	-	Phosphodiest
SX1_k127_5545502_5	1297865.APJD01000014_gene987	3.95e-107	349.0	COG2050@1|root,COG2050@2|Bacteria,1N088@1224|Proteobacteria,2UEDK@28211|Alphaproteobacteria,3JYJ1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Thioesterase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	4HBT
SX1_k127_5545502_3	1297865.APJD01000014_gene986	2.796e-145	461.0	COG0046@1|root,COG0046@2|Bacteria,1MYN4@1224|Proteobacteria,2TRGM@28211|Alphaproteobacteria,3JRAU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL	purL	-	6.3.5.3	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04463	RC00010,RC01160	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRS,AIRS_C
SX1_k127_5547686_1	1297865.APJD01000019_gene3093	6.738e-193	605.0	COG1220@1|root,COG1220@2|Bacteria,1MVK9@1224|Proteobacteria,2TRXC@28211|Alphaproteobacteria,3JT4A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis	hslU	-	-	ko:K03667	-	-	-	-	ko00000,ko03110	-	-	-	AAA_2,ClpB_D2-small
SX1_k127_5547686_0	1297865.APJD01000019_gene3094	5.873e-239	741.0	2EGQS@1|root,33AGX@2|Bacteria,1N4DX@1224|Proteobacteria,2TTB0@28211|Alphaproteobacteria,3JUA4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5547686_2	1297865.APJD01000019_gene3095	4.841e-117	379.0	COG2840@1|root,COG2840@2|Bacteria,1RH34@1224|Proteobacteria,2UCM1@28211|Alphaproteobacteria,3JWQZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Smr domain	smrA	-	-	-	-	-	-	-	-	-	-	-	Smr
SX1_k127_5547686_3	1297865.APJD01000019_gene3096	2.421e-10	60.0	COG2821@1|root,COG2821@2|Bacteria,1MXD4@1224|Proteobacteria,2TS5S@28211|Alphaproteobacteria,3JTB1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	MltA specific insert domain	mltA	-	-	ko:K08304	-	-	-	-	ko00000,ko01000,ko01011	-	GH102	-	3D,MltA
SX1_k127_5557257_9	1297865.APJD01000018_gene5696	6.273e-151	477.0	COG3210@1|root,COG3210@2|Bacteria,1MXIP@1224|Proteobacteria,2TTVB@28211|Alphaproteobacteria,3K3NX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	haemagglutination activity domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF3739,Haemagg_act
SX1_k127_5557257_13	224911.27348412	0.0008684	44.0	2978Y@1|root,2ZUGP@2|Bacteria,1RD02@1224|Proteobacteria,2U7VP@28211|Alphaproteobacteria,3JZ2X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5557257_10	1297865.APJD01000018_gene5697	3.003e-109	355.0	COG1595@1|root,COG1595@2|Bacteria,1RHYH@1224|Proteobacteria,2UA7M@28211|Alphaproteobacteria,3JXUF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	ECF sigma factor	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
SX1_k127_5557257_11	1297865.APJD01000018_gene5698	1.684e-101	330.0	COG1879@1|root,COG1879@2|Bacteria,1R6D7@1224|Proteobacteria,2VG0X@28211|Alphaproteobacteria,3JW3P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Periplasmic binding protein domain	MA20_22160	-	-	ko:K10439	ko02010,ko02030,map02010,map02030	M00212	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	Peripla_BP_4
SX1_k127_5557257_12	1230476.C207_00132	1.613e-81	273.0	COG1879@1|root,COG1879@2|Bacteria,1R6D7@1224|Proteobacteria,2VG0X@28211|Alphaproteobacteria,3JW3P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Periplasmic binding protein domain	MA20_22160	-	-	ko:K10439	ko02010,ko02030,map02010,map02030	M00212	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	Peripla_BP_4
SX1_k127_5557257_3	1297865.APJD01000018_gene5699	2.521e-220	692.0	COG1172@1|root,COG1172@2|Bacteria,1MX7D@1224|Proteobacteria,2TV15@28211|Alphaproteobacteria,3JUKZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Belongs to the binding-protein-dependent transport system permease family	MA20_22165	-	-	ko:K10440	ko02010,map02010	M00212	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	BPD_transp_2
SX1_k127_5557257_8	1297865.APJD01000018_gene5700	5.524e-155	490.0	COG1129@1|root,COG1129@2|Bacteria,1MVNR@1224|Proteobacteria,2TTCM@28211|Alphaproteobacteria,3JUJ1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	ATPases associated with a variety of cellular activities	MA20_22170	-	3.6.3.17	ko:K02056	-	M00221	-	-	ko00000,ko00002,ko01000,ko02000	3.A.1.2	-	-	ABC_tran
SX1_k127_5557257_1	1297865.APJD01000018_gene5701	1.302e-301	925.0	COG3659@1|root,COG3659@2|Bacteria,1QMC3@1224|Proteobacteria,2U3KG@28211|Alphaproteobacteria,3JWJ1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Carbohydrate-selective porin, OprB family	-	-	-	ko:K07267	-	-	-	-	ko00000,ko02000	1.B.19.1	-	-	OprB
SX1_k127_5557257_4	1297865.APJD01000018_gene5702	1.356e-201	657.0	COG1172@1|root,COG1172@2|Bacteria,1MX7D@1224|Proteobacteria,2TT59@28211|Alphaproteobacteria,3JTZQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Branched-chain amino acid transport system / permease component	-	-	-	ko:K10440	ko02010,map02010	M00212	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	BPD_transp_2
SX1_k127_5557257_0	1297865.APJD01000018_gene5703	3.356e-319	980.0	COG1129@1|root,COG1129@2|Bacteria,1MU22@1224|Proteobacteria,2TQJV@28211|Alphaproteobacteria,3JQYV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	ABC transporter	alsA	-	3.6.3.17	ko:K10441	ko02010,map02010	M00212	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	ABC_tran
SX1_k127_5557257_5	1297865.APJD01000018_gene5704	3.59e-196	613.0	COG1879@1|root,COG1879@2|Bacteria,1NGF2@1224|Proteobacteria,2TU2Y@28211|Alphaproteobacteria,3JT46@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Periplasmic binding protein domain	-	-	-	ko:K10439	ko02010,ko02030,map02010,map02030	M00212	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19	-	-	Peripla_BP_4
SX1_k127_5557257_2	1297865.APJD01000018_gene5705	7.989e-264	814.0	COG1940@1|root,COG1940@2|Bacteria,1NFM0@1224|Proteobacteria,2U1BM@28211|Alphaproteobacteria,3JUQY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	GK	ROK family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_24,MarR,MarR_2,ROK
SX1_k127_5557257_7	1297865.APJD01000018_gene5706	1.071e-161	514.0	COG1028@1|root,COG1028@2|Bacteria,1MXTP@1224|Proteobacteria,2TQST@28211|Alphaproteobacteria,3JSE8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	MA20_14035	-	1.1.1.175	ko:K22185	ko00040,map00040	-	R01429	RC00066	ko00000,ko00001,ko01000	-	-	-	adh_short_C2
SX1_k127_5557257_6	1297865.APJD01000018_gene5707	5.107e-170	534.0	COG1464@1|root,COG1464@2|Bacteria,1MUVY@1224|Proteobacteria,2U1JP@28211|Alphaproteobacteria,3JRQV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NLPA lipoprotein	-	-	-	ko:K02073	ko02010,map02010	M00238	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.24	-	-	Lipoprotein_9
SX1_k127_5572401_4	1230476.C207_02238	1.056e-182	585.0	COG1600@1|root,COG1600@2|Bacteria,1MV1H@1224|Proteobacteria,2TR5E@28211|Alphaproteobacteria,3JSKT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)	queG	GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	1.17.99.6	ko:K18979	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	DUF1730,Fer4_16,HEAT_2
SX1_k127_5572401_5	1297865.APJD01000028_gene5206	4.049e-164	521.0	COG1968@1|root,COG1968@2|Bacteria,1MX02@1224|Proteobacteria,2TSUR@28211|Alphaproteobacteria,3JTTD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin	uppP	-	3.6.1.27	ko:K06153	ko00550,map00550	-	R05627	RC00002	ko00000,ko00001,ko01000,ko01011	-	-	-	BacA
SX1_k127_5572401_3	1297865.APJD01000028_gene5207	8.979e-198	618.0	COG0702@1|root,COG0702@2|Bacteria,1MW54@1224|Proteobacteria,2TQMD@28211|Alphaproteobacteria,3JRP1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	GM	NmrA-like family	MA20_24380	-	1.6.5.3,1.6.99.3	ko:K00329,ko:K00356	ko00190,map00190	-	R11945	RC00061	ko00000,ko00001,ko01000	-	-	-	3Beta_HSD,Epimerase,NAD_binding_10,RmlD_sub_bind
SX1_k127_5572401_2	1297865.APJD01000028_gene5208	1.33e-200	627.0	COG1234@1|root,COG1234@2|Bacteria,1R64Z@1224|Proteobacteria,2U0BA@28211|Alphaproteobacteria,3K6AV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Beta-lactamase superfamily domain	-	-	3.1.26.11	ko:K00784	ko03013,map03013	-	-	-	ko00000,ko00001,ko01000,ko03016	-	-	-	Lactamase_B,Lactamase_B_2
SX1_k127_5572401_1	1297865.APJD01000028_gene5209	1.131e-259	803.0	COG0477@1|root,COG2814@2|Bacteria,1MU9G@1224|Proteobacteria,2U3E9@28211|Alphaproteobacteria,3JQVK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,Sugar_tr
SX1_k127_5572401_0	1297865.APJD01000028_gene5210	0.0	1740.0	COG3468@1|root,COG3468@2|Bacteria,1R5IK@1224|Proteobacteria,2TUHS@28211|Alphaproteobacteria,3JVID@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	MU	Autotransporter beta-domain	-	-	-	-	-	-	-	-	-	-	-	-	Autotransporter
SX1_k127_5572401_6	316057.RPD_0174	1.464e-54	192.0	COG0349@1|root,COG0349@2|Bacteria,1MWFD@1224|Proteobacteria,2TQXS@28211|Alphaproteobacteria,3JRA3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	3'-5' exonuclease	rnd1	-	3.1.13.5	ko:K03684	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	DNA_pol_A_exo1
SX1_k127_5579419_8	1297865.APJD01000024_gene416	6.191e-155	489.0	COG5343@1|root,COG5343@2|Bacteria,1N821@1224|Proteobacteria,2UF3V@28211|Alphaproteobacteria,3JR0Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Anti-sigma-K factor rskA	-	-	-	-	-	-	-	-	-	-	-	-	RskA
SX1_k127_5579419_3	1297865.APJD01000024_gene415	3.733e-261	807.0	COG0654@1|root,COG0654@2|Bacteria,1NUP2@1224|Proteobacteria,2U826@28211|Alphaproteobacteria	28211|Alphaproteobacteria	CH	FAD binding domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3,NAD_binding_8
SX1_k127_5579419_11	1297865.APJD01000024_gene414	6.716e-82	274.0	COG1846@1|root,COG1846@2|Bacteria,1RJ2M@1224|Proteobacteria,2U136@28211|Alphaproteobacteria,3JWAW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR_2
SX1_k127_5579419_14	1297865.APJD01000024_gene413	7.663e-64	218.0	2EGW4@1|root,33ANC@2|Bacteria,1NJAB@1224|Proteobacteria,2UMDZ@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5579419_7	1297865.APJD01000024_gene412	1.323e-168	532.0	COG0583@1|root,COG0583@2|Bacteria,1R3Y4@1224|Proteobacteria,2UCEN@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_5579419_18	1297865.APJD01000024_gene411	5.498e-33	130.0	2BP6F@1|root,32HXN@2|Bacteria,1N7T4@1224|Proteobacteria,2UFU3@28211|Alphaproteobacteria,3K1DA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5579419_0	172088.AUGA01000047_gene1377	0.0	1342.0	COG1298@1|root,COG1298@2|Bacteria,1MUF3@1224|Proteobacteria,2TQUR@28211|Alphaproteobacteria,3JR3G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin	flhA	-	-	ko:K02400	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035,ko02044	3.A.6.2,3.A.6.3	-	-	FHIPEP
SX1_k127_5579419_16	1297865.APJD01000024_gene409	1.763e-43	158.0	2AFUM@1|root,315X2@2|Bacteria,1NFM8@1224|Proteobacteria,2UI30@28211|Alphaproteobacteria,3K1NQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5579419_12	1297865.APJD01000024_gene408	1.425e-81	276.0	29CS9@1|root,2ZZQF@2|Bacteria,1N14R@1224|Proteobacteria,2UDSQ@28211|Alphaproteobacteria,3K0M6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5579419_5	1230476.C207_06919	1.584e-250	777.0	COG2271@1|root,COG2271@2|Bacteria,1QVY6@1224|Proteobacteria,2TVPK@28211|Alphaproteobacteria,3JSM7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	MA20_09740	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_5579419_10	1297865.APJD01000024_gene406	7.23e-94	312.0	COG1846@1|root,COG1846@2|Bacteria,1R3ZX@1224|Proteobacteria,2TR9P@28211|Alphaproteobacteria,3K3C6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SX1_k127_5579419_2	1297865.APJD01000024_gene405	0.0	1025.0	COG3203@1|root,COG3203@2|Bacteria,1MXN6@1224|Proteobacteria,2TSH7@28211|Alphaproteobacteria,3JQSQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane	ropAch1	-	-	-	-	-	-	-	-	-	-	-	Porin_2
SX1_k127_5579419_9	1297865.APJD01000024_gene404	6.213e-119	383.0	COG1846@1|root,COG1846@2|Bacteria,1PTFV@1224|Proteobacteria,2UBW4@28211|Alphaproteobacteria,3JYFG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	MarR family	-	-	-	-	-	-	-	-	-	-	-	-	MarR_2
SX1_k127_5579419_4	1297865.APJD01000024_gene403	1.155e-255	788.0	COG1073@1|root,COG1073@2|Bacteria,1MXJ3@1224|Proteobacteria,2TVHP@28211|Alphaproteobacteria,3JQQG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	hydrolases or acyltransferases, alpha beta hydrolase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DUF1100,Peptidase_S9
SX1_k127_5579419_13	1297865.APJD01000024_gene402	7.657e-79	264.0	2D78S@1|root,32TNJ@2|Bacteria,1N0VB@1224|Proteobacteria,2UCAT@28211|Alphaproteobacteria,3JYS9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF4864)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4864
SX1_k127_5579419_1	1297865.APJD01000024_gene401	0.0	1040.0	COG0790@1|root,COG4249@1|root,COG0790@2|Bacteria,COG4249@2|Bacteria,1Q8Z3@1224|Proteobacteria,2V7DR@28211|Alphaproteobacteria,3K2ES@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14
SX1_k127_5579419_19	1163409.UUA_05867	4.954e-10	60.0	COG4890@1|root,COG4890@2|Bacteria,1NGDQ@1224|Proteobacteria,1T97I@1236|Gammaproteobacteria,1XBSR@135614|Xanthomonadales	135614|Xanthomonadales	S	Membrane bound YbgT-like protein	-	-	-	-	-	-	-	-	-	-	-	-	YbgT_YccB
SX1_k127_5579419_6	1297865.APJD01000024_gene398	2.27e-238	739.0	COG1294@1|root,COG1294@2|Bacteria,1MURP@1224|Proteobacteria,2TU3I@28211|Alphaproteobacteria,3JXZB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome bd terminal oxidase subunit II	cydB	-	1.10.3.14	ko:K00426	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cyt_bd_oxida_II
SX1_k127_5579419_17	1297865.APJD01000024_gene397	3.574e-40	149.0	COG1271@1|root,COG1271@2|Bacteria,1MV60@1224|Proteobacteria,2TQMA@28211|Alphaproteobacteria,3JXDA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome bd terminal oxidase subunit I	cydA	-	1.10.3.14	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3	-	-	Cyt_bd_oxida_I
SX1_k127_559329_4	1297865.APJD01000012_gene1335	1.038e-179	564.0	COG0697@1|root,COG0697@2|Bacteria,1PHRI@1224|Proteobacteria,2TUAQ@28211|Alphaproteobacteria,3JT9V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	MA20_39710	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_559329_6	1297865.APJD01000012_gene1334	4.184e-93	307.0	2B4C3@1|root,31X3M@2|Bacteria,1RINY@1224|Proteobacteria,2UB5Q@28211|Alphaproteobacteria,3K6C4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Lipocalin-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Lipocalin_5
SX1_k127_559329_3	1297865.APJD01000012_gene1333	6.99e-185	580.0	COG0583@1|root,COG0583@2|Bacteria,1R49T@1224|Proteobacteria,2U6BN@28211|Alphaproteobacteria,3K0A3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	pecT	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_559329_5	1297865.APJD01000012_gene1332	9.186e-166	522.0	COG2227@1|root,COG2227@2|Bacteria,1MU89@1224|Proteobacteria,2TRIK@28211|Alphaproteobacteria,3JTA8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway	ubiG	-	2.1.1.222,2.1.1.64	ko:K00568	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00117	R04988,R05614,R08769,R08781	RC00003,RC00392,RC01895	ko00000,ko00001,ko00002,ko01000	-	-	-	Methyltransf_11,Methyltransf_23
SX1_k127_559329_7	1297865.APJD01000012_gene1331	3.797e-92	306.0	COG3428@1|root,COG3428@2|Bacteria,1N9PB@1224|Proteobacteria,2TUD0@28211|Alphaproteobacteria,3JW2D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bacterial PH domain	-	-	-	-	-	-	-	-	-	-	-	-	bPH_2
SX1_k127_559329_1	1297865.APJD01000012_gene1330	8.028e-265	816.0	COG0527@1|root,COG0527@2|Bacteria,1MW3H@1224|Proteobacteria,2TRFA@28211|Alphaproteobacteria,3JUKJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the aspartokinase family	lysC	GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.7.2.4	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R00480	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000	-	-	-	AA_kinase,ACT,ACT_7
SX1_k127_559329_10	224911.27354970	1.059e-05	53.0	COG2897@1|root,COG2897@2|Bacteria,1MW4B@1224|Proteobacteria,2TR9R@28211|Alphaproteobacteria,3JT1H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rhodanese Homology Domain	sseA	-	2.8.1.1,2.8.1.2	ko:K01011	ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122	-	R01931,R03105,R03106	RC00214	ko00000,ko00001,ko01000	-	-	-	Rhodanese
SX1_k127_559329_0	1230476.C207_06983	0.0	1449.0	COG3605@1|root,COG3605@2|Bacteria,1QTTV@1224|Proteobacteria,2TR3Z@28211|Alphaproteobacteria,3JV6Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Belongs to the PEP-utilizing enzyme family	ptsP	-	2.7.3.9	ko:K08484	ko02060,map02060	-	-	-	ko00000,ko00001,ko01000,ko02000	-	-	-	GAF,GAF_2,PEP-utilisers_N,PEP-utilizers,PEP-utilizers_C
SX1_k127_559329_2	1297865.APJD01000012_gene1328	2.901e-221	688.0	COG0216@1|root,COG0216@2|Bacteria,1MV28@1224|Proteobacteria,2TQSV@28211|Alphaproteobacteria,3JUZF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA	prfA	-	-	ko:K02835	-	-	-	-	ko00000,ko03012	-	-	-	PCRF,RF-1
SX1_k127_559329_8	1297865.APJD01000012_gene1327	1.772e-77	261.0	COG1846@1|root,COG1846@2|Bacteria,1N0KC@1224|Proteobacteria,2UC6T@28211|Alphaproteobacteria,3JYFA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	MarR family	-	-	-	-	-	-	-	-	-	-	-	-	MarR_2
SX1_k127_559329_9	1297865.APJD01000012_gene1326	6.112e-73	245.0	2A5XE@1|root,30UPF@2|Bacteria,1R4CE@1224|Proteobacteria,2TVMT@28211|Alphaproteobacteria,3JWZ7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_56001_4	1297865.APJD01000001_gene6043	2.033e-106	346.0	2BRAU@1|root,32K9C@2|Bacteria,1PI93@1224|Proteobacteria,2U2K7@28211|Alphaproteobacteria,3JUCH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_56001_5	1297865.APJD01000001_gene6042	1.374e-88	296.0	COG0797@1|root,COG0797@2|Bacteria,1MZ8S@1224|Proteobacteria,2UBTC@28211|Alphaproteobacteria,3JVXY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides	-	-	-	ko:K03642	-	-	-	-	ko00000	-	-	-	DPBB_1
SX1_k127_56001_0	1297865.APJD01000001_gene6041	0.0	1042.0	COG1680@1|root,COG1680@2|Bacteria,1NHIY@1224|Proteobacteria,2U0A3@28211|Alphaproteobacteria,3JXCG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SX1_k127_56001_10	1230476.C207_05311	3.824e-33	130.0	2AJDJ@1|root,319Z5@2|Bacteria,1N8XD@1224|Proteobacteria,2UFYS@28211|Alphaproteobacteria,3K12U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_56001_1	1297865.APJD01000001_gene6039	5.222e-161	509.0	COG0500@1|root,COG2226@2|Bacteria,1MV7N@1224|Proteobacteria,2TVGZ@28211|Alphaproteobacteria,3JWFX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Protein of unknown function (DUF1698)	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
SX1_k127_56001_12	1230476.C207_05309	5.878e-25	104.0	2EJ3S@1|root,33CV1@2|Bacteria,1N8ZT@1224|Proteobacteria,2UFYU@28211|Alphaproteobacteria,3K0VR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_56001_3	1297865.APJD01000001_gene6037	1.939e-108	353.0	COG3812@1|root,COG3812@2|Bacteria,1RGUV@1224|Proteobacteria,2U9BA@28211|Alphaproteobacteria,3JU3W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF1993)	-	-	-	ko:K09983	-	-	-	-	ko00000	-	-	-	DUF1993
SX1_k127_56001_8	1297865.APJD01000001_gene6036	4.228e-51	183.0	2A6UK@1|root,30VNY@2|Bacteria,1N1S2@1224|Proteobacteria,2UCFS@28211|Alphaproteobacteria,3K08N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_28860	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_56001_11	1297865.APJD01000001_gene6035	2.412e-30	119.0	2DI9G@1|root,302FJ@2|Bacteria,1ND3S@1224|Proteobacteria,2UINH@28211|Alphaproteobacteria,3K110@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_56001_9	398525.KB900701_gene4625	6.916e-41	153.0	2BVK6@1|root,33CZG@2|Bacteria,1N3Y5@1224|Proteobacteria,2UE8A@28211|Alphaproteobacteria,3K0RV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_56001_7	1297865.APJD01000001_gene6033	8.335e-67	234.0	COG0073@1|root,COG0073@2|Bacteria,1RGU7@1224|Proteobacteria,2U9AH@28211|Alphaproteobacteria,3JYX6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Putative tRNA binding domain	csaA	-	-	ko:K06878	-	-	-	-	ko00000	-	-	-	tRNA_bind
SX1_k127_56001_2	1297865.APJD01000001_gene6032	1.196e-124	401.0	COG1280@1|root,COG1280@2|Bacteria,1MWA1@1224|Proteobacteria,2TSNW@28211|Alphaproteobacteria,3JSAH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	LysE type translocator	-	-	-	-	-	-	-	-	-	-	-	-	LysE
SX1_k127_56001_6	1297865.APJD01000001_gene6031	2.257e-69	235.0	COG2240@1|root,COG2240@2|Bacteria,1MVC9@1224|Proteobacteria,2U2CH@28211|Alphaproteobacteria,3JSTJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Phosphomethylpyrimidine kinase	MA20_28940	-	2.7.1.35	ko:K00868	ko00750,ko01100,map00750,map01100	-	R00174,R01909,R02493	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	Phos_pyr_kin
SX1_k127_5606760_2	1297865.APJD01000040_gene2680	1.868e-92	305.0	28IIA@1|root,2Z8JD@2|Bacteria,1R3RS@1224|Proteobacteria,2U09X@28211|Alphaproteobacteria,3JXAJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	HTH DNA binding domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF1612,HTH_13
SX1_k127_5606760_1	1429916.X566_00685	2.891e-204	636.0	COG0464@1|root,COG0464@2|Bacteria,1MVVP@1224|Proteobacteria,2TR6U@28211|Alphaproteobacteria,3JV92@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	ATPase family associated with various cellular activities (AAA)	-	-	-	-	-	-	-	-	-	-	-	-	AAA
SX1_k127_5606760_0	1297865.APJD01000040_gene2678	0.0	1499.0	COG1404@1|root,COG1404@2|Bacteria,1ND93@1224|Proteobacteria,2U0FT@28211|Alphaproteobacteria,3JVB3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Subtilase family	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S8
SX1_k127_5608199_4	1297865.APJD01000035_gene5485	2.273e-108	351.0	COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,2TQQ7@28211|Alphaproteobacteria,3JSVS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the thiolase family	pcaF	-	2.3.1.174	ko:K07823	ko00362,ko01120,map00362,map01120	-	R00829	RC00004,RC00326	ko00000,ko00001,ko01000	-	-	-	Thiolase_C,Thiolase_N
SX1_k127_5608199_2	1297865.APJD01000035_gene5486	1.314e-168	529.0	COG3485@1|root,COG3485@2|Bacteria,1MUYX@1224|Proteobacteria,2TU2C@28211|Alphaproteobacteria,3JT90@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Protocatechuate 3,4-dioxygenase beta subunit N terminal	pcaH	-	1.13.11.3	ko:K00449	ko00362,ko00624,ko01100,ko01120,ko01220,map00362,map00624,map01100,map01120,map01220	-	R01631,R03549	RC00388,RC00953	br01602,ko00000,ko00001,ko01000	-	-	-	Dioxygenase_C,PCDO_beta_N
SX1_k127_5608199_3	1297865.APJD01000035_gene5487	4.319e-132	421.0	COG3485@1|root,COG3485@2|Bacteria,1MV3B@1224|Proteobacteria,2TTZJ@28211|Alphaproteobacteria,3JSK1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Dioxygenase	pcaG	-	1.13.11.3	ko:K00448	ko00362,ko00624,ko01100,ko01120,ko01220,map00362,map00624,map01100,map01120,map01220	-	R01631,R03549	RC00388,RC00953	br01602,ko00000,ko00001,ko01000	-	-	-	Dioxygenase_C
SX1_k127_5608199_1	1297865.APJD01000035_gene5488	1.273e-173	545.0	COG0169@1|root,COG0169@2|Bacteria,1Q95E@1224|Proteobacteria,2U01M@28211|Alphaproteobacteria,3JSTT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)	-	-	1.1.1.25	ko:K00014	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R02413	RC00206	ko00000,ko00001,ko00002,ko01000	-	-	-	Shikimate_dh_N,ThiF
SX1_k127_5608199_0	1297865.APJD01000035_gene5489	1.42e-260	803.0	COG0673@1|root,COG0673@2|Bacteria,1NVJK@1224|Proteobacteria,2U0NE@28211|Alphaproteobacteria,3JTW8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Oxidoreductase family, NAD-binding Rossmann fold	MA20_02630	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA
SX1_k127_5609885_1	1297865.APJD01000006_gene4389	1.73e-74	261.0	COG0745@1|root,COG0745@2|Bacteria,1MWZ5@1224|Proteobacteria,2TV3A@28211|Alphaproteobacteria,3JTFA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Transcriptional regulatory protein, C terminal	kdpE	-	-	ko:K07667	ko02020,ko02024,map02020,map02024	M00454	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
SX1_k127_5609885_0	1297865.APJD01000006_gene4388	0.0	1712.0	COG0642@1|root,COG2205@2|Bacteria,1MUZQ@1224|Proteobacteria,2TSS7@28211|Alphaproteobacteria,3JSNS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Osmosensitive K+ channel His kinase sensor domain	kdpD	-	2.7.13.3	ko:K07646	ko02020,map02020	M00454	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	DUF4118,GAF_3,HATPase_c,HisKA,KdpD,Usp
SX1_k127_5613582_4	1297865.APJD01000011_gene6691	2.498e-51	188.0	COG0346@1|root,COG0346@2|Bacteria,1RDNZ@1224|Proteobacteria,2U7TK@28211|Alphaproteobacteria,3JYP4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	MA20_22310	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
SX1_k127_5613582_2	1297865.APJD01000011_gene6692	6.265e-184	575.0	COG2207@1|root,COG2207@2|Bacteria,1QKC9@1224|Proteobacteria,2TSD8@28211|Alphaproteobacteria,3JTI2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	MA20_22305	-	-	ko:K07506	-	-	-	-	ko00000,ko03000	-	-	-	AraC_binding,HTH_18
SX1_k127_5613582_3	1297865.APJD01000011_gene6693	4.763e-121	391.0	COG0350@1|root,COG0350@2|Bacteria,1R5DM@1224|Proteobacteria,2U0QE@28211|Alphaproteobacteria,3JTC0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	6-O-methylguanine DNA methyltransferase, DNA binding domain	ogt2	-	2.1.1.63	ko:K00567	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	DNA_binding_1
SX1_k127_5613582_0	1297865.APJD01000011_gene6694	0.0	1013.0	COG1807@1|root,COG1807@2|Bacteria,1NAG4@1224|Proteobacteria,2U4AD@28211|Alphaproteobacteria,3JX5T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Alg9-like mannosyltransferase family	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_transf_22
SX1_k127_5613582_6	1230476.C207_03149	6.64e-33	128.0	2BJHE@1|root,3166C@2|Bacteria,1NGHU@1224|Proteobacteria,2UKI8@28211|Alphaproteobacteria,3K25F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3551)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3551
SX1_k127_5613582_1	1230476.C207_03148	6.021e-223	697.0	COG2141@1|root,COG2141@2|Bacteria,1N899@1224|Proteobacteria,2TTZ7@28211|Alphaproteobacteria,3JT2F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Luciferase-like monooxygenase	MA20_21690	-	-	-	-	-	-	-	-	-	-	-	Bac_luciferase
SX1_k127_5613582_5	1297865.APJD01000011_gene6696	5.137e-40	162.0	COG1902@1|root,COG1902@2|Bacteria,1MVE0@1224|Proteobacteria,2TQPY@28211|Alphaproteobacteria,3JTE3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NADH:flavin oxidoreductase / NADH oxidase family	-	-	-	-	-	-	-	-	-	-	-	-	Oxidored_FMN
SX1_k127_5613582_7	1297865.APJD01000011_gene6696	2.102e-15	75.0	COG1902@1|root,COG1902@2|Bacteria,1MVE0@1224|Proteobacteria,2TQPY@28211|Alphaproteobacteria,3JTE3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NADH:flavin oxidoreductase / NADH oxidase family	-	-	-	-	-	-	-	-	-	-	-	-	Oxidored_FMN
SX1_k127_5613588_1	1297865.APJD01000015_gene3467	1.8e-322	988.0	COG1027@1|root,COG1027@2|Bacteria,1R9JY@1224|Proteobacteria,2TVZD@28211|Alphaproteobacteria,3JSBM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Fumarase C C-terminus	aspA	-	4.3.1.1	ko:K01744	ko00250,ko01100,map00250,map01100	-	R00490	RC00316,RC02799	ko00000,ko00001,ko01000	-	-	-	FumaraseC_C,Lyase_1
SX1_k127_5613588_0	1297865.APJD01000015_gene3468	0.0	1280.0	COG2010@1|root,COG2010@2|Bacteria,1MVYK@1224|Proteobacteria,2U18V@28211|Alphaproteobacteria,3JRFQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5613588_3	1297865.APJD01000015_gene3469	2.033e-136	437.0	COG3571@1|root,COG3571@2|Bacteria,1RD20@1224|Proteobacteria,2U1XJ@28211|Alphaproteobacteria,3JSHJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	hydrolase of the alpha beta-hydrolase fold	-	-	-	ko:K07020	-	-	-	-	ko00000	-	-	-	Abhydrolase_6,DLH,Thioesterase
SX1_k127_5613588_2	1297865.APJD01000015_gene3470	1.365e-142	454.0	COG4126@1|root,COG4126@2|Bacteria,1MVNB@1224|Proteobacteria,2U28G@28211|Alphaproteobacteria,3JVNQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Asp/Glu/Hydantoin racemase	MA20_32210	GO:0003674,GO:0003824,GO:0016853,GO:0016854,GO:0036348	5.1.99.3	ko:K16841	ko00230,ko01120,map00230,map01120	-	R03925	RC01027	ko00000,ko00001,ko01000	-	-	-	Asp_Glu_race
SX1_k127_5613588_4	1297865.APJD01000015_gene3471	1.885e-102	333.0	COG4221@1|root,COG4221@2|Bacteria,1MW86@1224|Proteobacteria,2TSEM@28211|Alphaproteobacteria,3JWSJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_5634592_3	1297865.APJD01000022_gene349	6.792e-64	219.0	COG0395@1|root,COG0395@2|Bacteria,1QW7F@1224|Proteobacteria,2TR3V@28211|Alphaproteobacteria,3JSTC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Binding-protein-dependent transport system inner membrane component	MA20_03695	-	-	ko:K02026	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	BPD_transp_1
SX1_k127_5634592_2	1297865.APJD01000022_gene348	7.91e-163	514.0	COG1177@1|root,COG1177@2|Bacteria,1MVC5@1224|Proteobacteria,2TRRJ@28211|Alphaproteobacteria,3JT34@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Binding-protein-dependent transport system inner membrane component	potI	GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015846,GO:0015847,GO:0016020,GO:0016021,GO:0031224,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351	-	ko:K11074	ko02010,map02010	M00300	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.11.2	-	-	BPD_transp_1
SX1_k127_5634592_1	1297865.APJD01000022_gene347	1.067e-188	590.0	COG1176@1|root,COG1176@2|Bacteria,1MVGM@1224|Proteobacteria,2TSFD@28211|Alphaproteobacteria,3JSPC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Binding-protein-dependent transport system inner membrane component	potH	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015846,GO:0015847,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351	-	ko:K11075	ko02010,map02010	M00300	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.11.2	-	-	BPD_transp_1
SX1_k127_5634592_0	1297865.APJD01000022_gene346	1.95e-241	748.0	COG3842@1|root,COG3842@2|Bacteria,1MU3I@1224|Proteobacteria,2TQMJ@28211|Alphaproteobacteria,3JTXD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system	potG	GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015846,GO:0015847,GO:0016020,GO:0016021,GO:0031224,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351	-	ko:K11076	ko02010,map02010	M00300	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.11.2	-	-	ABC_tran,TOBE_2
SX1_k127_5634592_4	1297865.APJD01000022_gene345	8.353e-24	101.0	COG0457@1|root,COG0457@2|Bacteria,1N01S@1224|Proteobacteria,2TSR4@28211|Alphaproteobacteria,3JTG9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	COG0457 FOG TPR repeat	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5635780_0	1297865.APJD01000003_gene6132	3.806e-313	960.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JRP3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Efflux pump membrane transporter	-	-	-	-	-	-	-	-	-	-	-	-	ACR_tran
SX1_k127_5635945_0	1297865.APJD01000003_gene6473	5.824e-299	919.0	COG1132@1|root,COG1132@2|Bacteria,1MUBM@1224|Proteobacteria,2TSR1@28211|Alphaproteobacteria,3JSZB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Involved in beta-(1-- 2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP- binding domain (NBD) is responsible for energy generation	ndvA	GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
SX1_k127_5636131_2	398525.KB900701_gene2312	1.034e-101	331.0	COG0410@1|root,COG0410@2|Bacteria,1MU4Z@1224|Proteobacteria,2TS23@28211|Alphaproteobacteria,3JSG8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ATPases associated with a variety of cellular activities	urtE	-	-	ko:K11963	ko02010,map02010	M00323	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4.4,3.A.1.4.5	-	-	ABC_tran
SX1_k127_5636131_1	1297865.APJD01000011_gene6818	1.221e-171	540.0	COG0829@1|root,COG0829@2|Bacteria,1RABD@1224|Proteobacteria,2U57R@28211|Alphaproteobacteria,3JVJT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Required for maturation of urease via the functional incorporation of the urease nickel metallocenter	ureD	-	-	ko:K03190	-	-	-	-	ko00000	-	-	-	UreD
SX1_k127_5636131_5	1230476.C207_03027	6.221e-57	200.0	COG0831@1|root,COG0831@2|Bacteria,1RGXE@1224|Proteobacteria,2U947@28211|Alphaproteobacteria,3JZJV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the urease gamma subunit family	ureA	-	3.5.1.5	ko:K01430,ko:K14048	ko00220,ko00230,ko00791,ko01100,ko01120,ko05120,map00220,map00230,map00791,map01100,map01120,map05120	-	R00131	RC02798,RC02806	ko00000,ko00001,ko01000	-	-	-	Urease_beta,Urease_gamma
SX1_k127_5636131_4	1297865.APJD01000011_gene6820	5.302e-61	210.0	COG0832@1|root,COG0832@2|Bacteria,1RGW0@1224|Proteobacteria,2U9T4@28211|Alphaproteobacteria,3JYUT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the urease beta subunit family	ureB	-	3.5.1.5	ko:K01429	ko00220,ko00230,ko00791,ko01100,ko01120,map00220,map00230,map00791,map01100,map01120	-	R00131	RC02798,RC02806	ko00000,ko00001,ko01000	-	-	-	Urease_beta
SX1_k127_5636131_3	1297865.APJD01000011_gene6821	1.127e-100	331.0	COG0317@1|root,COG0317@2|Bacteria,1RGUA@1224|Proteobacteria,2U05J@28211|Alphaproteobacteria,3JT6M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KT	HD domain	-	-	2.7.6.5,3.1.7.2	ko:K01139	ko00230,map00230	-	R00336,R00429	RC00002,RC00078	ko00000,ko00001,ko01000,ko03009	-	-	-	HD_4
SX1_k127_5636131_0	1297865.APJD01000011_gene6822	0.0	1150.0	COG0804@1|root,COG0804@2|Bacteria,1MU5P@1224|Proteobacteria,2TSXP@28211|Alphaproteobacteria,3JSTP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family	ureC	-	3.5.1.5	ko:K01428	ko00220,ko00230,ko00791,ko01100,ko01120,ko05120,map00220,map00230,map00791,map01100,map01120,map05120	-	R00131	RC02798,RC02806	ko00000,ko00001,ko01000	-	-	-	Amidohydro_1,Urease_alpha
SX1_k127_563657_1	1297865.APJD01000021_gene3052	1.63e-135	432.0	COG3576@1|root,COG3576@2|Bacteria,1MWG9@1224|Proteobacteria,2TSKK@28211|Alphaproteobacteria,3JRNS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Pyridoxamine 5'-phosphate oxidase	MA20_01375	-	-	ko:K07006	-	-	-	-	ko00000	-	-	-	Putative_PNPOx
SX1_k127_563657_0	1297865.APJD01000021_gene3053	7.397e-136	433.0	COG1123@1|root,COG4172@2|Bacteria,1MU09@1224|Proteobacteria,2TQP0@28211|Alphaproteobacteria,3JRAE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the ABC transporter superfamily	-	-	-	ko:K02031,ko:K02032	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
SX1_k127_5656623_2	1297865.APJD01000036_gene1420	6.459e-35	135.0	2EGFD@1|root,33A7D@2|Bacteria,1NH03@1224|Proteobacteria,2UJKA@28211|Alphaproteobacteria,3K19B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1656)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1656
SX1_k127_5656623_0	1297865.APJD01000036_gene1419	4.736e-177	559.0	COG1566@1|root,COG1566@2|Bacteria,1MWG0@1224|Proteobacteria,2TRI4@28211|Alphaproteobacteria,3JUYY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	-	-	-	-	-	-	-	-	-	-	-	-	Biotin_lipoyl_2,HlyD_3
SX1_k127_5656623_3	224911.27348412	1.715e-07	53.0	2978Y@1|root,2ZUGP@2|Bacteria,1RD02@1224|Proteobacteria,2U7VP@28211|Alphaproteobacteria,3JZ2X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5656623_1	1297865.APJD01000036_gene1418	5.78e-126	406.0	2F4UF@1|root,33XGS@2|Bacteria,1R4VV@1224|Proteobacteria,2TSHV@28211|Alphaproteobacteria,3JVGK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_566454_2	1297865.APJD01000007_gene2074	1.159e-247	767.0	COG4597@1|root,COG4597@2|Bacteria,1MV0S@1224|Proteobacteria,2TR7G@28211|Alphaproteobacteria,3JTDW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K09970	ko02010,map02010	M00232	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3.18,3.A.1.3.7,3.A.1.3.8	-	-	BPD_transp_1
SX1_k127_566454_3	1297865.APJD01000007_gene2075	4.681e-242	749.0	COG0765@1|root,COG0765@2|Bacteria,1MV3I@1224|Proteobacteria,2TR9C@28211|Alphaproteobacteria,3JRVD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Binding-protein-dependent transport system inner membrane component	aapM	-	-	ko:K09971	ko02010,map02010	M00232	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3.18,3.A.1.3.7,3.A.1.3.8	-	-	BPD_transp_1
SX1_k127_566454_4	1297865.APJD01000007_gene2076	2.061e-170	536.0	COG2186@1|root,COG2186@2|Bacteria,1MXN5@1224|Proteobacteria,2U1II@28211|Alphaproteobacteria,3JVTS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FCD	-	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SX1_k127_566454_1	1297865.APJD01000007_gene2077	4.655e-294	919.0	COG0154@1|root,COG0154@2|Bacteria,1MUKC@1224|Proteobacteria,2TTUD@28211|Alphaproteobacteria,3JWRQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Amidase	-	-	3.5.1.4	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	-	R02540,R03096,R03180,R03909,R05551,R05590	RC00010,RC00100,RC00950,RC01025	ko00000,ko00001,ko01000	-	-	-	Amidase
SX1_k127_566454_0	1297865.APJD01000007_gene2078	3.987e-313	960.0	COG0154@1|root,COG0154@2|Bacteria,1MUKC@1224|Proteobacteria,2TTUD@28211|Alphaproteobacteria,3JQUA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	hormone biosynthetic process	bam	-	3.5.1.4	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	-	R02540,R03096,R03180,R03909,R05551,R05590	RC00010,RC00100,RC00950,RC01025	ko00000,ko00001,ko01000	-	-	-	Amidase
SX1_k127_5668781_3	1297865.APJD01000007_gene2251	7.542e-158	499.0	COG1028@1|root,COG1028@2|Bacteria,1NBB6@1224|Proteobacteria,2TVF5@28211|Alphaproteobacteria,3JWSV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_5668781_4	1297865.APJD01000007_gene2250	3.655e-52	188.0	COG0776@1|root,COG0776@2|Bacteria,1RFWH@1224|Proteobacteria,2U9D0@28211|Alphaproteobacteria,3JZCP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Belongs to the bacterial histone-like protein family	hupA	-	-	-	-	-	-	-	-	-	-	-	Bac_DNA_binding
SX1_k127_5668781_0	1297865.APJD01000007_gene2249	0.0	1125.0	COG0747@1|root,COG0747@2|Bacteria,1MUZH@1224|Proteobacteria,2TS14@28211|Alphaproteobacteria,3JW6R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Bacterial extracellular solute-binding proteins, family 5 Middle	-	-	-	ko:K02035	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	SBP_bac_5
SX1_k127_5668781_1	1297865.APJD01000007_gene2248	3.633e-199	621.0	COG0601@1|root,COG0601@2|Bacteria,1MU8Z@1224|Proteobacteria,2TQJC@28211|Alphaproteobacteria,3JSJW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K02033	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
SX1_k127_5668781_2	1297865.APJD01000007_gene2247	5.517e-164	520.0	COG1173@1|root,COG1173@2|Bacteria,1MVHY@1224|Proteobacteria,2TQVQ@28211|Alphaproteobacteria,3JT76@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	N-terminal TM domain of oligopeptide transport permease C	-	-	-	ko:K02034	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1,OppC_N
SX1_k127_5668781_5	1297865.APJD01000007_gene2246	1.114e-06	55.0	COG1123@1|root,COG4172@2|Bacteria,1MU09@1224|Proteobacteria,2TQP0@28211|Alphaproteobacteria,3JRAE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the ABC transporter superfamily	-	-	-	ko:K02031,ko:K02032	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
SX1_k127_5672324_1	1297865.APJD01000006_gene4585	1.468e-24	103.0	COG1233@1|root,COG1233@2|Bacteria,1MV2R@1224|Proteobacteria,2TSR0@28211|Alphaproteobacteria,3JUVV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Flavin containing amine oxidoreductase	MA20_01895	-	-	-	-	-	-	-	-	-	-	-	Amino_oxidase
SX1_k127_5672324_0	1297865.APJD01000006_gene4586	0.0	1519.0	COG0421@1|root,COG0421@2|Bacteria,1N1PJ@1224|Proteobacteria,2TUJQ@28211|Alphaproteobacteria,3JSDN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine	MA20_01900	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5672324_2	1051985.l11_06560	1.952e-21	104.0	COG0739@1|root,COG0739@2|Bacteria,1MVTF@1224|Proteobacteria,2VHBS@28216|Betaproteobacteria,2KQNX@206351|Neisseriales	206351|Neisseriales	M	Peptidase, M23 family	-	-	-	-	-	-	-	-	-	-	-	-	OapA,Peptidase_M23
SX1_k127_568128_2	1297865.APJD01000011_gene6795	3.068e-194	607.0	COG2064@1|root,COG2064@2|Bacteria,1MWAZ@1224|Proteobacteria,2TSFA@28211|Alphaproteobacteria,3JRBE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	Type II secretion system (T2SS), protein F	MA20_18450	-	-	ko:K12511	-	-	-	-	ko00000,ko02044	-	-	-	T2SSF
SX1_k127_568128_6	323097.Nham_3476	5.215e-07	51.0	COG5567@1|root,COG5567@2|Bacteria,1NEKY@1224|Proteobacteria,2UHV1@28211|Alphaproteobacteria,3K148@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Prokaryotic lipoprotein-attachment site	-	-	-	-	-	-	-	-	-	-	-	-	LPAM_2
SX1_k127_568128_3	1297865.APJD01000011_gene6794	1.023e-146	468.0	COG5010@1|root,COG5010@2|Bacteria,1MVTK@1224|Proteobacteria,2TVBA@28211|Alphaproteobacteria,3JTRH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Tetratricopeptide repeat	MA20_18455	-	-	-	-	-	-	-	-	-	-	-	TPR_10,TPR_12,TPR_16,TPR_19,TPR_2,TPR_4,TPR_8
SX1_k127_568128_1	1297865.APJD01000011_gene6793	1.166e-305	939.0	COG0260@1|root,COG0260@2|Bacteria,1MUIN@1224|Proteobacteria,2TSI6@28211|Alphaproteobacteria,3JTK4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the peptidase M17 family	pepA	-	3.4.11.1	ko:K01255	ko00480,ko01100,map00480,map01100	-	R00899,R04951	RC00096,RC00141	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_M17
SX1_k127_568128_4	335659.S23_09920	2.988e-127	411.0	COG0791@1|root,COG0791@2|Bacteria,1MW03@1224|Proteobacteria,2TSFG@28211|Alphaproteobacteria,3JQZJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	NlpC/P60 family	-	-	-	-	-	-	-	-	-	-	-	-	NLPC_P60,SH3_3
SX1_k127_568128_0	1297865.APJD01000011_gene6791	0.0	1054.0	COG1123@1|root,COG4172@2|Bacteria,1MU09@1224|Proteobacteria,2TQP0@28211|Alphaproteobacteria,3JRI2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the ABC transporter superfamily	yejF	GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006857,GO:0008144,GO:0008150,GO:0015399,GO:0015405,GO:0015833,GO:0015893,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0035672,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0042626,GO:0042884,GO:0042886,GO:0042891,GO:0043167,GO:0043168,GO:0043492,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363	-	ko:K02031,ko:K02032,ko:K13896	ko02010,ko02024,map02010,map02024	M00239,M00349	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.21,3.A.1.5.24	-	-	ABC_tran,oligo_HPY
SX1_k127_568128_5	1297865.APJD01000011_gene6790	2.938e-100	327.0	COG4239@1|root,COG4239@2|Bacteria,1MUM5@1224|Proteobacteria,2TR1Y@28211|Alphaproteobacteria,3JSKV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	N-terminal TM domain of oligopeptide transport permease C	yejE	GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006857,GO:0008150,GO:0015833,GO:0015893,GO:0016020,GO:0035672,GO:0042221,GO:0042493,GO:0042884,GO:0042886,GO:0042891,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944	-	ko:K13895	ko02010,map02010	M00349	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5.21,3.A.1.5.24	-	-	BPD_transp_1,OppC_N
SX1_k127_5681546_5	1297865.APJD01000026_gene2501	1.037e-58	203.0	COG0394@1|root,COG0394@2|Bacteria,1RE6V@1224|Proteobacteria,2U82Y@28211|Alphaproteobacteria,3JZ9H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Low molecular weight phosphatase family	-	-	3.1.3.48	ko:K01104	-	-	-	-	ko00000,ko01000	-	-	-	LMWPc
SX1_k127_5681546_9	1168059.KB899087_gene1061	3.223e-13	70.0	COG1961@1|root,COG1961@2|Bacteria,1MWCZ@1224|Proteobacteria,2TRIY@28211|Alphaproteobacteria,3F0VP@335928|Xanthobacteraceae	28211|Alphaproteobacteria	L	Resolvase, N terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Recombinase,Resolvase,Zn_ribbon_recom
SX1_k127_5681546_2	1297865.APJD01000026_gene2499	4.179e-211	655.0	COG2267@1|root,COG2267@2|Bacteria,1QUW0@1224|Proteobacteria,2TWTR@28211|Alphaproteobacteria,3K712@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Alpha/beta hydrolase family	-	-	3.8.1.5	ko:K01563	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	-	R05284,R05367,R05368,R05369,R05370,R07669,R07670	RC01317,RC01340,RC01341,RC02013	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1
SX1_k127_5681546_4	1297865.APJD01000026_gene2498	9.719e-95	312.0	COG1733@1|root,COG1733@2|Bacteria,1RIZT@1224|Proteobacteria,2U7SS@28211|Alphaproteobacteria,3JYGD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	HxlR-like helix-turn-helix	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
SX1_k127_5681546_7	398525.KB900701_gene4960	8.485e-25	104.0	2BSRR@1|root,32MUN@2|Bacteria,1N8MG@1224|Proteobacteria,2UFFX@28211|Alphaproteobacteria,3K0VX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5681546_3	1297865.APJD01000026_gene2497	3.256e-179	561.0	COG3570@1|root,COG3570@2|Bacteria,1MW4R@1224|Proteobacteria,2TU3X@28211|Alphaproteobacteria,3JW9A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Aminoglycoside/hydroxyurea antibiotic resistance kinase	str	-	2.7.1.72	ko:K04343	-	M00766	R02225	RC00002,RC00078	br01600,ko00000,ko00002,ko01000,ko01504	-	-	-	APH_6_hur
SX1_k127_5681546_6	1230476.C207_06945	8.786e-49	175.0	29B67@1|root,2ZY4K@2|Bacteria,1RJ4A@1224|Proteobacteria,2U9GH@28211|Alphaproteobacteria,3JZPP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_35995	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5681546_0	1297865.APJD01000026_gene2495	1.357e-305	936.0	COG2133@1|root,COG2133@2|Bacteria,1MVK5@1224|Proteobacteria,2TRN9@28211|Alphaproteobacteria,3JU1E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Glucose / Sorbosone dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	GSDH
SX1_k127_5681546_1	1297865.APJD01000026_gene2494	3.212e-228	707.0	COG2202@1|root,COG3437@1|root,COG3920@1|root,COG2202@2|Bacteria,COG3437@2|Bacteria,COG3920@2|Bacteria,1NWNJ@1224|Proteobacteria,2TWQC@28211|Alphaproteobacteria,3JU7K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	HWE histidine kinase	MA20_07275	-	-	-	-	-	-	-	-	-	-	-	HWE_HK,PAS_3,PAS_4,PAS_9,Response_reg
SX1_k127_5684109_1	1297865.APJD01000022_gene342	6.33e-61	212.0	COG0579@1|root,COG0579@2|Bacteria,1N0QB@1224|Proteobacteria,2TU6K@28211|Alphaproteobacteria,3JSGV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	FAD dependent oxidoreductase	MA20_03725	-	-	-	-	-	-	-	-	-	-	-	DAO
SX1_k127_5684109_0	1297865.APJD01000022_gene343	0.0	1665.0	COG5000@1|root,COG5001@1|root,COG5000@2|Bacteria,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,3JT1B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Putative diguanylate phosphodiesterase	MA20_03720	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,MHYT,PAS_4,PAS_7,PAS_8,PAS_9
SX1_k127_5688250_4	1297865.APJD01000007_gene1814	1.74e-64	220.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,3JSAE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Putative diguanylate phosphodiesterase	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,HAMP,MHYT,PAS_7,dCache_1,dCache_3
SX1_k127_5688250_1	1297865.APJD01000007_gene1813	7.205e-219	679.0	COG1018@1|root,COG1018@2|Bacteria,1MU6E@1224|Proteobacteria,2TRE9@28211|Alphaproteobacteria,3JUVZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Oxidoreductase FAD-binding domain	-	-	-	ko:K21832	-	-	-	-	ko00000	-	-	-	FAD_binding_6,Fer2,NAD_binding_1
SX1_k127_5688250_3	1297865.APJD01000007_gene1812	7.406e-148	470.0	COG1802@1|root,COG1802@2|Bacteria,1NWSI@1224|Proteobacteria,2TTXQ@28211|Alphaproteobacteria,3JTR0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FCD	MA20_45020	-	-	ko:K11475	-	-	-	-	ko00000,ko03000	-	-	-	FCD,GntR
SX1_k127_5688250_0	1297865.APJD01000007_gene1811	2.552e-239	741.0	COG4638@1|root,COG4638@2|Bacteria,1MV2G@1224|Proteobacteria,2TT1V@28211|Alphaproteobacteria,3JSR9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rieske [2Fe-2S] domain	MA20_45025	-	-	-	-	-	-	-	-	-	-	-	PaO,Rieske
SX1_k127_5688250_2	1297865.APJD01000007_gene1810	1.768e-166	524.0	28NMJ@1|root,2ZBN2@2|Bacteria,1NMEG@1224|Proteobacteria,2U0BR@28211|Alphaproteobacteria,3JU07@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2778)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2778
SX1_k127_5689461_1	1297865.APJD01000003_gene6143	7.407e-09	57.0	COG1846@1|root,COG1846@2|Bacteria,1N0KC@1224|Proteobacteria,2UC6T@28211|Alphaproteobacteria,3JY4P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR_2
SX1_k127_5689461_0	1297865.APJD01000003_gene6142	7.006e-282	871.0	COG0038@1|root,COG0517@1|root,COG0038@2|Bacteria,COG0517@2|Bacteria,1MV4K@1224|Proteobacteria,2TTBG@28211|Alphaproteobacteria,3JWMQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Voltage gated chloride channel	-	-	-	ko:K03281	-	-	-	-	ko00000	2.A.49	-	-	CBS,Voltage_CLC
SX1_k127_5700191_7	1282876.BAOK01000001_gene2274	4.974e-22	95.0	COG0347@1|root,COG0347@2|Bacteria,1RGWK@1224|Proteobacteria,2U73Z@28211|Alphaproteobacteria,4BQ9M@82117|unclassified Alphaproteobacteria	28211|Alphaproteobacteria	K	Belongs to the P(II) protein family	glnB	GO:0003674,GO:0006808,GO:0008150,GO:0030234,GO:0050789,GO:0050790,GO:0065007,GO:0065009,GO:0098772	-	ko:K04751	ko02020,map02020	-	-	-	ko00000,ko00001	-	-	-	P-II
SX1_k127_5700191_1	1297865.APJD01000020_gene122	1.21e-314	963.0	COG0174@1|root,COG0174@2|Bacteria,1MUGQ@1224|Proteobacteria,2TSCR@28211|Alphaproteobacteria,3JTH1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	glutamine synthetase	glnA	-	6.3.1.2	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	-	R00253	RC00010,RC02798	ko00000,ko00001,ko01000,ko04147	-	-	-	Gln-synt_C,Gln-synt_N
SX1_k127_5700191_6	1297865.APJD01000020_gene121	2.646e-49	180.0	COG1942@1|root,COG1942@2|Bacteria,1NBW3@1224|Proteobacteria,2UHFK@28211|Alphaproteobacteria,3JZW0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tautomerase enzyme	-	-	5.3.2.6	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	M00569	R03966,R05389	RC01040,RC01355	ko00000,ko00001,ko00002,ko01000	-	-	-	Tautomerase
SX1_k127_5700191_4	1297865.APJD01000020_gene120	1.935e-203	634.0	COG4977@1|root,COG4977@2|Bacteria,1MXAU@1224|Proteobacteria,2VF3N@28211|Alphaproteobacteria,3JT8J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	DJ-1_PfpI,HTH_18
SX1_k127_5700191_3	1297865.APJD01000020_gene119	1.543e-232	719.0	COG1840@1|root,COG1840@2|Bacteria,1MXZ8@1224|Proteobacteria,2V4CF@28211|Alphaproteobacteria,3JTT4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Bacterial extracellular solute-binding protein	-	-	-	-	-	-	-	-	-	-	-	-	SBP_bac_6
SX1_k127_5700191_2	1297865.APJD01000020_gene118	4.585e-233	721.0	COG2355@1|root,COG2355@2|Bacteria,1MWEW@1224|Proteobacteria,2TR5C@28211|Alphaproteobacteria,3JTYK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Membrane dipeptidase (Peptidase family M19)	-	-	3.4.13.19	ko:K01273	-	-	-	-	ko00000,ko00537,ko01000,ko01002,ko04147	-	-	-	Peptidase_M19
SX1_k127_5700191_5	1297865.APJD01000020_gene117	1.806e-137	439.0	COG0625@1|root,COG0625@2|Bacteria,1NE6Z@1224|Proteobacteria,2TVN6@28211|Alphaproteobacteria,3JVXF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, N-terminal domain	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C_2,GST_C_3,GST_N
SX1_k127_5700191_0	1297865.APJD01000020_gene116	0.0	1299.0	COG0784@1|root,COG3852@1|root,COG4191@1|root,COG0784@2|Bacteria,COG3852@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TQQ9@28211|Alphaproteobacteria,3JTQS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9,Response_reg
SX1_k127_5713840_8	1297865.APJD01000026_gene2464	9.499e-74	251.0	COG5331@1|root,COG5331@2|Bacteria,1N7DJ@1224|Proteobacteria	1224|Proteobacteria	S	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	MAPEG
SX1_k127_5713840_0	1297865.APJD01000026_gene2465	9.905e-292	896.0	COG0621@1|root,COG0621@2|Bacteria,1MU7N@1224|Proteobacteria,2TQUS@28211|Alphaproteobacteria,3JRQH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12	rimO	-	2.8.4.4	ko:K14441	-	-	R10652	RC00003,RC03217	ko00000,ko01000,ko03009	-	-	-	Radical_SAM,TRAM,UPF0004
SX1_k127_5713840_5	398525.KB900701_gene4922	5.554e-114	369.0	COG3707@1|root,COG3707@2|Bacteria,1MXDV@1224|Proteobacteria,2U220@28211|Alphaproteobacteria,3JUBP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	ANTAR	nasT	-	-	ko:K07183	-	-	-	-	ko00000,ko02022	-	-	-	ANTAR,Response_reg
SX1_k127_5713840_7	1297865.APJD01000026_gene2467	7.403e-78	271.0	COG0715@1|root,COG0715@2|Bacteria,1MWDN@1224|Proteobacteria,2TS0X@28211|Alphaproteobacteria,3JSRI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NMT1-like family	MA20_13115	-	-	ko:K15576,ko:K22067	ko00910,ko02010,map00910,map02010	M00438	-	-	ko00000,ko00001,ko00002,ko02000,ko02022	3.A.1.16.1,3.A.1.16.2	-	-	NMT1_2
SX1_k127_5713840_3	1297865.APJD01000026_gene2467	3.243e-154	487.0	COG0715@1|root,COG0715@2|Bacteria,1MWDN@1224|Proteobacteria,2TS0X@28211|Alphaproteobacteria,3JSRI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NMT1-like family	MA20_13115	-	-	ko:K15576,ko:K22067	ko00910,ko02010,map00910,map02010	M00438	-	-	ko00000,ko00001,ko00002,ko02000,ko02022	3.A.1.16.1,3.A.1.16.2	-	-	NMT1_2
SX1_k127_5713840_9	1297865.APJD01000026_gene2468	7.888e-22	96.0	2AF7D@1|root,3156E@2|Bacteria,1NCR5@1224|Proteobacteria,2UF41@28211|Alphaproteobacteria,3K144@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5713840_6	1297865.APJD01000026_gene2469	3.796e-83	276.0	2A7NF@1|root,30WKH@2|Bacteria,1REBK@1224|Proteobacteria,2U72P@28211|Alphaproteobacteria,3JYX8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_13300	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5713840_2	1297865.APJD01000026_gene2470	1.98e-160	509.0	COG1540@1|root,COG1540@2|Bacteria,1MUYV@1224|Proteobacteria,2TQUC@28211|Alphaproteobacteria,3JT0U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the UPF0271 (lamB) family	MA20_13135	-	-	ko:K07160	-	-	-	-	ko00000	-	-	-	LamB_YcsF
SX1_k127_5713840_1	1297865.APJD01000026_gene2471	1.042e-213	673.0	COG1984@1|root,COG1984@2|Bacteria,1MU9H@1224|Proteobacteria,2TS7P@28211|Alphaproteobacteria,3JUFZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Allophanate hydrolase subunit 2	MA20_13140	-	3.5.1.54	ko:K01457	ko00220,ko00791,ko01100,ko01120,map00220,map00791,map01100,map01120	-	R00005	RC02756	ko00000,ko00001,ko01000	-	-	-	CT_A_B
SX1_k127_5713840_4	1297865.APJD01000026_gene2472	1.375e-150	477.0	COG2049@1|root,COG2049@2|Bacteria,1MWRB@1224|Proteobacteria,2U0AE@28211|Alphaproteobacteria,3JS42@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Allophanate hydrolase subunit 1	MA20_13145	-	3.5.1.54	ko:K01457	ko00220,ko00791,ko01100,ko01120,map00220,map00791,map01100,map01120	-	R00005	RC02756	ko00000,ko00001,ko01000	-	-	-	CT_C_D
SX1_k127_5717386_0	1297865.APJD01000039_gene1712	0.0	1031.0	COG0326@1|root,COG0326@2|Bacteria,1MUUE@1224|Proteobacteria,2TQRS@28211|Alphaproteobacteria,3JRH3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Molecular chaperone. Has ATPase activity	htpG	-	-	ko:K04079	ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418	-	-	-	ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147	-	-	-	HATPase_c,HATPase_c_3,HSP90
SX1_k127_5717386_1	1297865.APJD01000039_gene1711	4.903e-191	598.0	COG0491@1|root,COG0491@2|Bacteria,1MUAV@1224|Proteobacteria,2TUVK@28211|Alphaproteobacteria,3JVA5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
SX1_k127_5717386_2	1297865.APJD01000039_gene1710	2.569e-190	594.0	COG4774@1|root,COG4774@2|Bacteria,1MV0X@1224|Proteobacteria,2TVX5@28211|Alphaproteobacteria,3K6QH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TonB dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SX1_k127_5719793_3	1297865.APJD01000020_gene126	2.664e-170	535.0	COG4221@1|root,COG4221@2|Bacteria,1R83E@1224|Proteobacteria,2TVY6@28211|Alphaproteobacteria,3JXDD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_5719793_2	1297865.APJD01000020_gene127	6.919e-196	612.0	COG0583@1|root,COG0583@2|Bacteria,1MU2E@1224|Proteobacteria,2TUNU@28211|Alphaproteobacteria,3JUG2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_5719793_6	1297865.APJD01000020_gene129	2.15e-68	233.0	COG2329@1|root,COG2329@2|Bacteria,1RCYM@1224|Proteobacteria,2U7PT@28211|Alphaproteobacteria,3K6AH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Antibiotic biosynthesis monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5719793_4	1297865.APJD01000020_gene130	9.371e-166	523.0	COG0457@1|root,COG0457@2|Bacteria,1QAEC@1224|Proteobacteria,2VEQQ@28211|Alphaproteobacteria,3K6CY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_16,TPR_19
SX1_k127_5719793_5	1297865.APJD01000020_gene131	2.239e-164	517.0	28Q4W@1|root,2ZCMZ@2|Bacteria,1MX8J@1224|Proteobacteria,2U0AB@28211|Alphaproteobacteria,3JTV5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5719793_1	1297865.APJD01000020_gene132	4.344e-232	732.0	COG4948@1|root,COG4948@2|Bacteria,1MYZE@1224|Proteobacteria,2TU3A@28211|Alphaproteobacteria,3JW29@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain	MA20_06335	-	4.2.1.156,4.2.1.42,5.1.2.2	ko:K01781,ko:K20023	ko00053,ko00627,ko01120,map00053,map00627,map01120	-	R03791,R04161,R05608	RC00543,RC00998	ko00000,ko00001,ko01000	-	-	-	MR_MLE_C,MR_MLE_N
SX1_k127_5719793_0	1297865.APJD01000020_gene133	4.441e-277	856.0	COG2132@1|root,COG2132@2|Bacteria,1MU0J@1224|Proteobacteria,2TQXH@28211|Alphaproteobacteria,3JRZF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Multicopper oxidase	-	-	-	-	-	-	-	-	-	-	-	-	Cu-oxidase,Cu-oxidase_2,Cu-oxidase_3
SX1_k127_5719793_9	1120963.KB894491_gene1107	5.224e-06	55.0	2DE24@1|root,2ZK69@2|Bacteria,1P9N5@1224|Proteobacteria,1SU0Y@1236|Gammaproteobacteria	1236|Gammaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5719793_8	1298867.AUES01000004_gene642	7.378e-39	145.0	COG0544@1|root,COG0544@2|Bacteria,1MUJP@1224|Proteobacteria,2TS8W@28211|Alphaproteobacteria,3JSQU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase	tig	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	-	ko:K03545	-	-	-	-	ko00000	-	-	-	FKBP_C,Trigger_C,Trigger_N
SX1_k127_5720796_1	1297865.APJD01000014_gene690	1.704e-224	695.0	COG1878@1|root,COG1878@2|Bacteria,1MVWU@1224|Proteobacteria,2TUQ1@28211|Alphaproteobacteria,3JRVC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative cyclase	MA20_36465	-	-	-	-	-	-	-	-	-	-	-	Cyclase
SX1_k127_5720796_5	1297865.APJD01000014_gene691	4.351e-100	326.0	COG1661@1|root,COG1661@2|Bacteria,1RJC1@1224|Proteobacteria	1224|Proteobacteria	S	DNA-binding protein with PD1-like DNA-binding motif	-	-	-	ko:K06934	-	-	-	-	ko00000	-	-	-	DUF296
SX1_k127_5720796_4	1297865.APJD01000014_gene692	6.17e-157	496.0	COG1028@1|root,COG1028@2|Bacteria,1MUWC@1224|Proteobacteria,2TV32@28211|Alphaproteobacteria,3JRJH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short,adh_short_C2
SX1_k127_5720796_0	1297865.APJD01000014_gene693	3.926e-232	722.0	COG0477@1|root,COG2814@2|Bacteria,1MU9G@1224|Proteobacteria,2TSPI@28211|Alphaproteobacteria,3JUSF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	-	-	-	ko:K19577	-	-	-	-	ko00000,ko02000	2.A.1.2.65	-	-	MFS_1,Sugar_tr
SX1_k127_5720796_3	1297865.APJD01000014_gene694	6.858e-170	534.0	COG0656@1|root,COG0656@2|Bacteria,1MWFS@1224|Proteobacteria,2TT2Q@28211|Alphaproteobacteria,3JRGG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Aldo/keto reductase family	yafB	-	-	-	-	-	-	-	-	-	-	-	Aldo_ket_red
SX1_k127_5720796_2	1297865.APJD01000014_gene695	1.338e-218	679.0	COG2141@1|root,COG2141@2|Bacteria,1MWDV@1224|Proteobacteria,2TV51@28211|Alphaproteobacteria	28211|Alphaproteobacteria	C	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases	-	-	-	-	-	-	-	-	-	-	-	-	Bac_luciferase
SX1_k127_5720796_6	1297865.APJD01000014_gene696	3.485e-81	273.0	COG0583@1|root,COG0583@2|Bacteria,1MU7H@1224|Proteobacteria,2TS72@28211|Alphaproteobacteria,3JTCN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_5722327_2	1297865.APJD01000003_gene6299	5.533e-209	655.0	COG0481@1|root,COG0481@2|Bacteria,1MVZA@1224|Proteobacteria,2TR3H@28211|Alphaproteobacteria,3JR8J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner	lepA	-	-	ko:K03596	ko05134,map05134	-	-	-	ko00000,ko00001	-	-	-	EFG_C,EFG_II,GTP_EFTU,GTP_EFTU_D2,LepA_C
SX1_k127_5722327_0	1297865.APJD01000003_gene6300	1.585e-296	911.0	COG1033@1|root,COG4249@1|root,COG4640@1|root,COG1033@2|Bacteria,COG4249@2|Bacteria,COG4640@2|Bacteria,1R3WZ@1224|Proteobacteria,2TTKN@28211|Alphaproteobacteria,3JSCS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Caspase domain	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14,YARHG
SX1_k127_5722327_3	1297865.APJD01000003_gene6301	2.504e-166	523.0	COG0791@1|root,COG0791@2|Bacteria,1RBV6@1224|Proteobacteria,2TVPH@28211|Alphaproteobacteria,3JSUV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	D-alanyl-D-alanine carboxypeptidase	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M15_4
SX1_k127_5722327_1	1297865.APJD01000003_gene6302	8.197e-263	812.0	COG1807@1|root,COG1807@2|Bacteria,1QA8B@1224|Proteobacteria,2TS1J@28211|Alphaproteobacteria,3JT1S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Dolichyl-phosphate-mannose-protein mannosyltransferase	MA20_19960	-	-	-	-	-	-	-	-	-	-	-	PMT_2
SX1_k127_5724766_2	1230476.C207_00680	3.297e-129	414.0	COG0015@1|root,COG0015@2|Bacteria,1MV4B@1224|Proteobacteria,2TQUE@28211|Alphaproteobacteria,3JVZZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Adenylosuccinate lyase C-terminus	-	-	-	-	-	-	-	-	-	-	-	-	ADSL_C,Lyase_1
SX1_k127_5724766_1	1297865.APJD01000014_gene1002	2.163e-168	531.0	COG2513@1|root,COG2513@2|Bacteria,1R3SD@1224|Proteobacteria,2TRRV@28211|Alphaproteobacteria,3JX0F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Phosphoenolpyruvate phosphomutase	-	-	-	-	-	-	-	-	-	-	-	-	PEP_mutase
SX1_k127_5724766_0	1297865.APJD01000014_gene1001	1.548e-186	585.0	COG0583@1|root,COG0583@2|Bacteria,1PMTG@1224|Proteobacteria,2TV35@28211|Alphaproteobacteria,3JU8G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_5731614_2	670307.HYPDE_38793	3.038e-154	505.0	COG1368@1|root,COG1368@2|Bacteria,1MXT1@1224|Proteobacteria,2TVM8@28211|Alphaproteobacteria	28211|Alphaproteobacteria	M	Sulfatase	MA20_02375	-	-	-	-	-	-	-	-	-	-	-	Sulfatase
SX1_k127_5731614_1	1380394.JADL01000001_gene2449	9.649e-184	583.0	COG2319@1|root,COG3474@1|root,COG2319@2|Bacteria,COG3474@2|Bacteria,1MWJA@1224|Proteobacteria,2TRIX@28211|Alphaproteobacteria,2JRAN@204441|Rhodospirillales	204441|Rhodospirillales	C	WD domain, G-beta repeat	-	-	-	-	-	-	-	-	-	-	-	-	Cytochrom_C,WD40
SX1_k127_5731614_0	1123072.AUDH01000033_gene1974	6.067e-251	792.0	COG0303@1|root,COG1910@1|root,COG0303@2|Bacteria,COG1910@2|Bacteria,1MVD5@1224|Proteobacteria,2TVN2@28211|Alphaproteobacteria,2JVBX@204441|Rhodospirillales	204441|Rhodospirillales	HP	MoeA C-terminal region (domain IV)	-	-	-	-	-	-	-	-	-	-	-	-	MoCF_biosynth,MoeA_C,MoeA_N,PBP_like
SX1_k127_5731614_3	441620.Mpop_2963	7.781e-59	219.0	COG0303@1|root,COG0303@2|Bacteria,1PDCE@1224|Proteobacteria,2TR67@28211|Alphaproteobacteria,1JTGX@119045|Methylobacteriaceae	28211|Alphaproteobacteria	H	MoeA domain protein domain I and II	-	-	-	-	-	-	-	-	-	-	-	-	MoCF_biosynth,MoeA_C,MoeA_N
SX1_k127_5731614_4	1502851.FG93_00362	3.614e-22	98.0	COG0425@1|root,COG0425@2|Bacteria,1MZA5@1224|Proteobacteria,2UF3C@28211|Alphaproteobacteria,3K05E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Belongs to the sulfur carrier protein TusA family	tusA	-	-	ko:K04085	ko04122,map04122	-	-	-	ko00000,ko00001,ko01000,ko03016	-	-	-	TusA
SX1_k127_5731614_5	1502851.FG93_02909	4.878e-15	79.0	COG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2U1MF@28211|Alphaproteobacteria,3JV27@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter family receptor	-	-	-	-	-	-	-	-	-	-	-	-	TctC
SX1_k127_5733088_13	1297865.APJD01000011_gene6650	2.571e-148	471.0	COG2378@1|root,COG2378@2|Bacteria,1MXS8@1224|Proteobacteria,2TT5H@28211|Alphaproteobacteria,3JV0Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	WYL domain	MA20_18740	-	-	-	-	-	-	-	-	-	-	-	HTH_11,WYL
SX1_k127_5733088_24	1297865.APJD01000011_gene6649	5.388e-71	242.0	COG0727@1|root,COG0727@2|Bacteria,1N37X@1224|Proteobacteria,2U95A@28211|Alphaproteobacteria,3JZEV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative zinc- or iron-chelating domain	-	-	-	ko:K06940	-	-	-	-	ko00000	-	-	-	CxxCxxCC
SX1_k127_5733088_21	1297865.APJD01000011_gene6648	1.286e-80	269.0	2EHCP@1|root,33B4H@2|Bacteria,1RC35@1224|Proteobacteria,2U667@28211|Alphaproteobacteria,3JYHJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_18750	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5733088_20	1297865.APJD01000011_gene6647	3.638e-81	271.0	2EESX@1|root,338KG@2|Bacteria,1RD32@1224|Proteobacteria,2U7BH@28211|Alphaproteobacteria,3JZ24@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3307)	MA20_18760	-	-	-	-	-	-	-	-	-	-	-	DUF3307
SX1_k127_5733088_1	1297865.APJD01000011_gene6646	3.582e-287	884.0	COG2358@1|root,COG2358@2|Bacteria,1NANT@1224|Proteobacteria,2U1M3@28211|Alphaproteobacteria,3JW9J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	NMT1-like family	MA20_18765	-	-	-	-	-	-	-	-	-	-	-	NMT1_3
SX1_k127_5733088_22	1297865.APJD01000011_gene6645	1.99e-78	264.0	COG1873@1|root,COG1873@2|Bacteria,1N6X0@1224|Proteobacteria,2UFAR@28211|Alphaproteobacteria,3JZ09@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PRC-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	PRC
SX1_k127_5733088_25	1297865.APJD01000011_gene6644	5.876e-47	171.0	2AER8@1|root,314MV@2|Bacteria,1NHCJ@1224|Proteobacteria,2UJIA@28211|Alphaproteobacteria,3K210@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5733088_11	1297865.APJD01000011_gene6643	2.48e-161	509.0	COG0664@1|root,COG0664@2|Bacteria,1PIN3@1224|Proteobacteria,2TSA8@28211|Alphaproteobacteria,3JX1T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Crp-like helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,cNMP_binding
SX1_k127_5733088_23	1297865.APJD01000011_gene6642	3.236e-76	256.0	COG3861@1|root,COG3861@2|Bacteria,1MZM2@1224|Proteobacteria,2UBTQ@28211|Alphaproteobacteria,3JZPK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PRC-barrel domain	MA20_07315	-	-	-	-	-	-	-	-	-	-	-	PRC
SX1_k127_5733088_27	1297865.APJD01000011_gene6641	1.165e-34	133.0	2AEPK@1|root,314JU@2|Bacteria,1NAMH@1224|Proteobacteria,2UHW8@28211|Alphaproteobacteria,3K13I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5733088_29	1297865.APJD01000011_gene6640	2.153e-30	123.0	2ABKD@1|root,3111W@2|Bacteria,1N0SM@1224|Proteobacteria,2UCST@28211|Alphaproteobacteria,3K0IU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5733088_28	1230476.C207_06605	1.915e-31	124.0	2ADSV@1|root,30237@2|Bacteria,1NB6Q@1224|Proteobacteria,2VGGG@28211|Alphaproteobacteria,3K6J4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5733088_26	1297865.APJD01000011_gene6639	3.569e-36	138.0	2EFX8@1|root,339PG@2|Bacteria,1NDNV@1224|Proteobacteria,2UGAE@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5733088_8	1297865.APJD01000011_gene6638	1.052e-180	570.0	COG1014@1|root,COG1014@2|Bacteria,1MV7Q@1224|Proteobacteria,2TTHE@28211|Alphaproteobacteria,3JWFA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	COG1014 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, gamma subunit	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5733088_17	1297865.APJD01000011_gene6637	2.776e-136	435.0	COG0664@1|root,COG0664@2|Bacteria,1Q93V@1224|Proteobacteria,2TTEY@28211|Alphaproteobacteria,3JS14@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	cyclic nucleotide-binding	-	-	-	-	-	-	-	-	-	-	-	-	Imp-YgjV,cNMP_binding
SX1_k127_5733088_6	1297865.APJD01000011_gene6636	6.992e-233	723.0	COG2905@1|root,COG2905@2|Bacteria,1QUQR@1224|Proteobacteria,2TWQS@28211|Alphaproteobacteria,3JT9S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Ion transport protein	-	-	-	ko:K10716	-	-	-	-	ko00000,ko02000	1.A.1.1,1.A.1.13,1.A.1.17,1.A.1.24,1.A.1.25,1.A.1.6	-	-	Ion_trans,cNMP_binding
SX1_k127_5733088_10	1297865.APJD01000011_gene6635	1.226e-164	518.0	COG1024@1|root,COG1024@2|Bacteria,1MVA6@1224|Proteobacteria,2TSXK@28211|Alphaproteobacteria,3JVUN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	MA20_18780	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_5733088_18	1297865.APJD01000011_gene6634	8.287e-90	297.0	2D0TH@1|root,32T97@2|Bacteria,1NEQZ@1224|Proteobacteria,2U6Y4@28211|Alphaproteobacteria,3JY3N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5733088_16	1297865.APJD01000011_gene6633	7.28e-139	442.0	COG0625@1|root,COG0625@2|Bacteria,1RA05@1224|Proteobacteria,2TS58@28211|Alphaproteobacteria,3JT29@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, N-terminal domain	gst1	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_2,GST_N,GST_N_3
SX1_k127_5733088_7	1297865.APJD01000011_gene6632	1.336e-214	667.0	COG2378@1|root,COG2378@2|Bacteria,1PXCX@1224|Proteobacteria,2TTKZ@28211|Alphaproteobacteria,3JUFX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	WYL domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_11,WYL
SX1_k127_5733088_19	1297865.APJD01000011_gene6631	1.555e-87	289.0	2A6VQ@1|root,30VQA@2|Bacteria,1RB0J@1224|Proteobacteria,2U657@28211|Alphaproteobacteria,3JYIH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5733088_12	1297865.APJD01000011_gene6630	1.282e-150	478.0	COG0778@1|root,COG0778@2|Bacteria,1PG8V@1224|Proteobacteria,2U59W@28211|Alphaproteobacteria,3JRNI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Nitroreductase family	MA20_06710	-	-	-	-	-	-	-	-	-	-	-	Nitroreductase
SX1_k127_5733088_3	1297865.APJD01000011_gene6629	3.905e-277	860.0	COG1960@1|root,COG1960@2|Bacteria,1MVJC@1224|Proteobacteria,2TTRD@28211|Alphaproteobacteria,3JQZI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	acyl-CoA dehydrogenase	MA20_06715	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_5733088_2	1297865.APJD01000011_gene6628	6.541e-281	863.0	COG1960@1|root,COG1960@2|Bacteria,1MVJC@1224|Proteobacteria,2TTRD@28211|Alphaproteobacteria,3JQZI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	acyl-CoA dehydrogenase	MA20_06720	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_5733088_5	1297865.APJD01000011_gene6627	2.482e-241	747.0	COG1960@1|root,COG1960@2|Bacteria,1N05C@1224|Proteobacteria,2TT9T@28211|Alphaproteobacteria,3JTG7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	acyl-CoA dehydrogenase	MA20_06725	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_N
SX1_k127_5733088_0	1297865.APJD01000011_gene6626	0.0	1268.0	COG0318@1|root,COG0318@2|Bacteria,1MUQZ@1224|Proteobacteria,2TRV7@28211|Alphaproteobacteria,3JRYR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme	MA20_06730	-	6.2.1.34	ko:K12508	-	-	-	-	ko00000,ko01000	-	-	-	AMP-binding
SX1_k127_5733088_9	1297865.APJD01000011_gene6625	1.514e-169	533.0	COG1024@1|root,COG1024@2|Bacteria,1MXHV@1224|Proteobacteria,2TTEG@28211|Alphaproteobacteria,3JT1F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the enoyl-CoA hydratase isomerase family	MA20_06735	-	4.2.1.17	ko:K01692	ko00071,ko00280,ko00281,ko00310,ko00360,ko00362,ko00380,ko00410,ko00627,ko00640,ko00650,ko00903,ko00930,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00310,map00360,map00362,map00380,map00410,map00627,map00640,map00650,map00903,map00930,map01100,map01110,map01120,map01130,map01212	M00032,M00087	R03026,R03045,R04137,R04170,R04204,R04224,R04738,R04740,R04744,R04746,R04749,R05595,R06411,R06412,R06942,R08093	RC00831,RC00834,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
SX1_k127_5733088_15	1297865.APJD01000011_gene6624	1.891e-142	468.0	COG1028@1|root,COG1028@2|Bacteria,1MUBQ@1224|Proteobacteria,2TRPN@28211|Alphaproteobacteria,3JU36@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Belongs to the short-chain dehydrogenases reductases (SDR) family	MA20_06740	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_5733088_14	1230476.C207_06667	2.407e-145	462.0	COG1309@1|root,COG1309@2|Bacteria,1MX0H@1224|Proteobacteria,2U08M@28211|Alphaproteobacteria,3JUKN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Transcriptional regulator, TetR, C-terminal	MA20_06745	-	-	-	-	-	-	-	-	-	-	-	TetR_C_9,TetR_N
SX1_k127_5733088_4	1297865.APJD01000011_gene6622	9.36e-251	775.0	COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,2TSA0@28211|Alphaproteobacteria,3JQM2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the thiolase family	MA20_06750	-	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
SX1_k127_5740601_0	1297865.APJD01000047_gene4798	6.71e-208	647.0	COG0392@1|root,COG0392@2|Bacteria,1MVZ8@1224|Proteobacteria,2TTDM@28211|Alphaproteobacteria,3JS9U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Lysylphosphatidylglycerol synthase TM region	-	-	-	ko:K07027	-	-	-	-	ko00000,ko02000	4.D.2	-	-	LPG_synthase_TM
SX1_k127_5740601_2	1297865.APJD01000047_gene4799	1.472e-199	625.0	COG0472@1|root,COG0472@2|Bacteria,1MWYW@1224|Proteobacteria,2TTW6@28211|Alphaproteobacteria,3JVCM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Glycosyl transferase family 4	mraY2	-	2.7.8.33,2.7.8.35	ko:K02851,ko:K13007	-	-	R08856	RC00002	ko00000,ko01000,ko01003,ko01005	-	-	-	Glycos_transf_4
SX1_k127_5740601_1	1297865.APJD01000047_gene4800	3.208e-200	627.0	COG0451@1|root,COG0451@2|Bacteria,1MX2J@1224|Proteobacteria,2TVNU@28211|Alphaproteobacteria,3JQWN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Male sterility protein	-	-	5.1.3.2,5.1.3.26	ko:K01784,ko:K19997	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00361,M00362,M00632	R00291,R02984	RC00289	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase
SX1_k127_5740601_3	1297865.APJD01000047_gene4801	1.706e-31	123.0	COG0438@1|root,COG0438@2|Bacteria,1MY5T@1224|Proteobacteria,2TSZW@28211|Alphaproteobacteria,3JRMR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Glycosyl transferases group 1	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1
SX1_k127_5744267_1	1297865.APJD01000019_gene3304	1.768e-287	885.0	COG0055@1|root,COG0055@2|Bacteria,1MUFU@1224|Proteobacteria,2TRGP@28211|Alphaproteobacteria,3JTVC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits	atpD	-	3.6.3.14	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko01000	3.A.2.1	-	-	ATP-synt_ab,ATP-synt_ab_N
SX1_k127_5744267_2	1297865.APJD01000019_gene3303	2.54e-171	540.0	COG0224@1|root,COG0224@2|Bacteria,1MU28@1224|Proteobacteria,2TR11@28211|Alphaproteobacteria,3JTH0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex	atpG	-	-	ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt
SX1_k127_5744267_0	1297865.APJD01000019_gene3302	0.0	997.0	COG0056@1|root,COG0056@2|Bacteria,1MUG7@1224|Proteobacteria,2TQYK@28211|Alphaproteobacteria,3JRUG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit	atpA	-	3.6.3.14	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194,ko01000	3.A.2.1	-	-	ATP-synt_ab,ATP-synt_ab_C,ATP-synt_ab_N
SX1_k127_5744267_3	1230476.C207_04655	3.801e-100	329.0	COG0712@1|root,COG0712@2|Bacteria,1MVRH@1224|Proteobacteria,2U5IC@28211|Alphaproteobacteria,3JSRB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation	atpH	-	-	ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	OSCP
SX1_k127_5744267_4	1297865.APJD01000019_gene3300	3.082e-95	315.0	COG0797@1|root,COG0797@2|Bacteria,1MZ8S@1224|Proteobacteria,2UBTC@28211|Alphaproteobacteria,3JWQF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides	rlpA	-	-	ko:K03642	-	-	-	-	ko00000	-	-	-	DPBB_1
SX1_k127_5760895_5	398525.KB900701_gene5303	4.657e-78	261.0	COG0102@1|root,COG0102@2|Bacteria,1RA11@1224|Proteobacteria,2U5FM@28211|Alphaproteobacteria,3JUX1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly	rplM	GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02871	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_L13
SX1_k127_5760895_4	1297865.APJD01000020_gene110	2.815e-94	310.0	COG0103@1|root,COG0103@2|Bacteria,1RD4A@1224|Proteobacteria,2U5B5@28211|Alphaproteobacteria,3JR49@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the universal ribosomal protein uS9 family	rpsI	GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02996	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S9
SX1_k127_5760895_1	1297865.APJD01000020_gene111	1.304e-261	808.0	COG2199@1|root,COG3706@2|Bacteria,1MZV7@1224|Proteobacteria,2TRAF@28211|Alphaproteobacteria,3JR84@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Diguanylate cyclase	MA20_36965	-	-	-	-	-	-	-	-	-	-	-	GGDEF
SX1_k127_5760895_7	1297865.APJD01000020_gene112	1.654e-40	150.0	29CMW@1|root,2ZZK5@2|Bacteria,1N0R2@1224|Proteobacteria,2UFKQ@28211|Alphaproteobacteria,3K0YI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5760895_2	1297865.APJD01000020_gene113	3.034e-212	669.0	COG0628@1|root,COG0628@2|Bacteria,1MW0B@1224|Proteobacteria,2TQSH@28211|Alphaproteobacteria,3JUWT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	AI-2E family transporter	-	-	-	-	-	-	-	-	-	-	-	-	AI-2E_transport
SX1_k127_5760895_3	172088.AUGA01000033_gene4583	3.213e-163	514.0	COG2071@1|root,COG2071@2|Bacteria,1MV8E@1224|Proteobacteria,2TSU3@28211|Alphaproteobacteria,3JTEG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Peptidase C26	puuD	-	-	ko:K07010	-	-	-	-	ko00000,ko01002	-	-	-	Peptidase_C26
SX1_k127_5760895_0	1297865.APJD01000020_gene115	0.0	1520.0	COG2931@1|root,COG2931@2|Bacteria,1R6U6@1224|Proteobacteria,2U1D4@28211|Alphaproteobacteria	28211|Alphaproteobacteria	Q	domain protein	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5760895_6	1297865.APJD01000020_gene116	7.283e-67	233.0	COG0784@1|root,COG3852@1|root,COG4191@1|root,COG0784@2|Bacteria,COG3852@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TQQ9@28211|Alphaproteobacteria,3JTQS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	His Kinase A (phosphoacceptor) domain	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9,Response_reg
SX1_k127_5778056_7	1297865.APJD01000008_gene5582	1.418e-144	458.0	COG4923@1|root,COG4923@2|Bacteria,1MY1R@1224|Proteobacteria,2U4CU@28211|Alphaproteobacteria,3JRED@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF429)	-	-	-	-	-	-	-	-	-	-	-	-	DUF429
SX1_k127_5778056_6	1297865.APJD01000008_gene5581	3.095e-158	507.0	COG2367@1|root,COG2367@2|Bacteria,1NMW4@1224|Proteobacteria,2TX7R@28211|Alphaproteobacteria,3JSG3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase enzyme family	bla	-	3.5.2.6	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	M00627,M00628	R06363	RC01499	ko00000,ko00001,ko00002,ko01000,ko01504	-	-	-	Beta-lactamase2
SX1_k127_5778056_20	1297865.APJD01000008_gene5580	1.393e-56	199.0	COG2128@1|root,COG2128@2|Bacteria,1QW8V@1224|Proteobacteria,2TWTB@28211|Alphaproteobacteria,3JZDW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5778056_15	1297865.APJD01000008_gene5579	2.963e-108	352.0	COG2917@1|root,COG2917@2|Bacteria,1P9FF@1224|Proteobacteria,2TR7Y@28211|Alphaproteobacteria,3JRH8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	probably involved in intracellular septation	-	-	-	-	-	-	-	-	-	-	-	-	IspA
SX1_k127_5778056_14	1297865.APJD01000008_gene5578	2.176e-113	368.0	COG2917@1|root,COG2917@2|Bacteria,1QKX9@1224|Proteobacteria,2U20X@28211|Alphaproteobacteria,3JREP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	probably involved in intracellular septation	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5778056_1	1297865.APJD01000008_gene5577	0.0	1005.0	COG3670@1|root,COG3670@2|Bacteria,1MY1X@1224|Proteobacteria,2TS7A@28211|Alphaproteobacteria,3JTX3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Retinal pigment epithelial membrane protein	MA20_08640	-	-	ko:K11159	-	-	-	-	ko00000	-	-	-	RPE65
SX1_k127_5778056_11	1230476.C207_00733	3.71e-132	427.0	COG1309@1|root,COG1309@2|Bacteria,1MUUY@1224|Proteobacteria,2TQY0@28211|Alphaproteobacteria,3JU14@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	WHG domain	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N,WHG
SX1_k127_5778056_12	1297865.APJD01000008_gene5575	9.073e-122	391.0	2A66I@1|root,30UZ1@2|Bacteria,1R3XX@1224|Proteobacteria,2U3RN@28211|Alphaproteobacteria,3JSZ5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5778056_10	1297865.APJD01000008_gene5574	1.687e-133	427.0	COG2940@1|root,COG2940@2|Bacteria,1MWFB@1224|Proteobacteria,2U05I@28211|Alphaproteobacteria,3JQPI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain	-	-	-	ko:K07117	-	-	-	-	ko00000	-	-	-	SET
SX1_k127_5778056_18	1297865.APJD01000008_gene5573	1.774e-85	284.0	COG1959@1|root,COG1959@2|Bacteria,1N05H@1224|Proteobacteria,2UBZM@28211|Alphaproteobacteria,3JYF3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Transcriptional regulator	-	-	-	ko:K13771	ko05132,map05132	-	-	-	ko00000,ko00001,ko03000	-	-	-	Rrf2
SX1_k127_5778056_16	1297865.APJD01000008_gene5572	1.174e-104	340.0	COG2346@1|root,COG2346@2|Bacteria,1MZSM@1224|Proteobacteria,2UCHK@28211|Alphaproteobacteria,3JV8R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bacterial-like globin	MA20_34335	-	-	ko:K06886	-	-	-	-	ko00000	-	-	-	Bac_globin
SX1_k127_5778056_19	1297865.APJD01000008_gene5571	9.64e-68	233.0	2BW2J@1|root,331CU@2|Bacteria,1N7GK@1224|Proteobacteria,2U7KS@28211|Alphaproteobacteria,3JYVT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5778056_22	1297865.APJD01000008_gene5570	1.6e-41	153.0	2AD2G@1|root,312QQ@2|Bacteria,1N47Z@1224|Proteobacteria,2UDHQ@28211|Alphaproteobacteria,3K01S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5778056_5	1297865.APJD01000008_gene5569	3.183e-175	550.0	COG1396@1|root,COG1396@2|Bacteria,1MWUC@1224|Proteobacteria,2TU04@28211|Alphaproteobacteria,3JTW2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Helix-turn-helix XRE-family like proteins	MA20_08830	-	-	-	-	-	-	-	-	-	-	-	HTH_3,HTH_31
SX1_k127_5778056_8	1297865.APJD01000008_gene5568	4.843e-140	445.0	COG2761@1|root,COG2761@2|Bacteria,1NXUB@1224|Proteobacteria,2TRJ6@28211|Alphaproteobacteria,3JS82@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	DSBA-like thioredoxin domain	dsb	-	-	-	-	-	-	-	-	-	-	-	DSBA
SX1_k127_5778056_9	1297865.APJD01000008_gene5567	1.05e-138	447.0	2E5W4@1|root,330K6@2|Bacteria,1N893@1224|Proteobacteria,2UGUZ@28211|Alphaproteobacteria,3JRW1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	NIPSNAP	-	-	-	-	-	-	-	-	-	-	-	-	NIPSNAP
SX1_k127_5778056_4	1297865.APJD01000008_gene5566	1.497e-186	582.0	COG1305@1|root,COG1305@2|Bacteria,1R9WH@1224|Proteobacteria,2U80B@28211|Alphaproteobacteria,3JZ3A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Transglutaminase-like superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Transglut_core
SX1_k127_5778056_2	1297865.APJD01000008_gene5565	1.223e-242	753.0	COG5653@1|root,COG5653@2|Bacteria,1N3Z9@1224|Proteobacteria,2TRT5@28211|Alphaproteobacteria,3JUA5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_6
SX1_k127_5778056_0	1297865.APJD01000008_gene5564	0.0	1073.0	COG3250@1|root,COG5297@1|root,COG3250@2|Bacteria,COG5297@2|Bacteria,1MX46@1224|Proteobacteria	1224|Proteobacteria	G	Alpha-L-arabinofuranosidase B, catalytic	-	-	-	-	-	-	-	-	-	-	-	-	AbfB,ArabFuran-catal
SX1_k127_5778056_3	1297865.APJD01000008_gene5563	3.226e-195	610.0	COG2171@1|root,COG2171@2|Bacteria,1MYKK@1224|Proteobacteria,2U570@28211|Alphaproteobacteria,3JX3X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA	-	-	2.3.1.117	ko:K00674	ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230	M00016	R04365	RC00004,RC01136	ko00000,ko00001,ko00002,ko01000	-	-	-	Hexapep_2,THDPS_M
SX1_k127_5778056_17	1297865.APJD01000008_gene5562	7.325e-87	287.0	2A6V8@1|root,30VPR@2|Bacteria,1RAWU@1224|Proteobacteria,2U5H7@28211|Alphaproteobacteria,3JYBF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5778056_21	1230476.C207_00720	1.834e-42	156.0	2AFD0@1|root,315CR@2|Bacteria,1ND84@1224|Proteobacteria,2UGN1@28211|Alphaproteobacteria,3K162@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5778056_13	1297865.APJD01000008_gene5560	4.046e-120	387.0	COG4249@1|root,COG4249@2|Bacteria,1R3WZ@1224|Proteobacteria,2TUBK@28211|Alphaproteobacteria,3JS5H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Caspase domain	MA20_02090	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C14
SX1_k127_5786158_3	1297865.APJD01000009_gene2783	2.735e-112	362.0	COG2267@1|root,COG2267@2|Bacteria,1QUZX@1224|Proteobacteria,2TWE4@28211|Alphaproteobacteria,3JTRZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Thioesterase domain	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_6
SX1_k127_5786158_7	1297865.APJD01000009_gene2782	4.107e-84	280.0	COG1610@1|root,COG1610@2|Bacteria,1RGZS@1224|Proteobacteria,2U7DJ@28211|Alphaproteobacteria,3JYDG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Yqey-like protein	MA20_04985	-	-	ko:K09117	-	-	-	-	ko00000	-	-	-	YqeY
SX1_k127_5786158_6	1297865.APJD01000009_gene2781	6.69e-96	314.0	29WQH@1|root,30IBF@2|Bacteria,1RAMH@1224|Proteobacteria,2U6X4@28211|Alphaproteobacteria,3JYNR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5786158_0	1297865.APJD01000009_gene2780	0.0	1112.0	COG0365@1|root,COG0365@2|Bacteria,1MUF5@1224|Proteobacteria,2TRII@28211|Alphaproteobacteria,3JU9D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	AMP-binding enzyme C-terminal domain	MA20_04975	-	6.2.1.1	ko:K01895	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	M00357	R00235,R00236,R00316,R00926,R01354	RC00004,RC00012,RC00043,RC00070,RC02746,RC02816	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_5786158_4	1297865.APJD01000009_gene2779	4.926e-108	350.0	COG3832@1|root,COG3832@2|Bacteria,1N4A1@1224|Proteobacteria,2TUKQ@28211|Alphaproteobacteria,3JVZD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
SX1_k127_5786158_9	754035.Mesau_01027	3.209e-37	146.0	COG3832@1|root,COG3832@2|Bacteria,1RB46@1224|Proteobacteria,2U5JZ@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
SX1_k127_5786158_5	1297865.APJD01000009_gene2777	3.954e-100	326.0	COG3832@1|root,COG3832@2|Bacteria,1RDXJ@1224|Proteobacteria,2U7BG@28211|Alphaproteobacteria,3JYMG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Activator of Hsp90 ATPase homolog 1-like protein	-	-	-	-	-	-	-	-	-	-	-	-	AHSA1
SX1_k127_5786158_8	1396141.BATP01000039_gene1433	4.02e-45	165.0	COG0640@1|root,COG0640@2|Bacteria,46VMW@74201|Verrucomicrobia	74201|Verrucomicrobia	K	helix_turn_helix, Arsenical Resistance Operon Repressor	-	-	-	-	-	-	-	-	-	-	-	-	HTH_20
SX1_k127_5786158_1	1297865.APJD01000009_gene2775	1.417e-308	949.0	COG5276@1|root,COG5276@2|Bacteria,1MU72@1224|Proteobacteria,2TZVG@28211|Alphaproteobacteria,3JS0R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	repeat protein	MA20_04930	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5786158_2	1297865.APJD01000009_gene2774	3.94e-115	371.0	2A6R3@1|root,30VJ7@2|Bacteria,1RA66@1224|Proteobacteria,2U5Q2@28211|Alphaproteobacteria,3JY3C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5786158_10	1297865.APJD01000009_gene2773	4.8e-08	55.0	COG1280@1|root,COG1280@2|Bacteria,1MXAI@1224|Proteobacteria,2TSWP@28211|Alphaproteobacteria,3JRZ8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	LysE type translocator	-	-	-	-	-	-	-	-	-	-	-	-	LysE
SX1_k127_5798531_0	1297865.APJD01000005_gene3746	5.156e-318	974.0	COG1129@1|root,COG1129@2|Bacteria,1QU8N@1224|Proteobacteria,2TWPU@28211|Alphaproteobacteria,3K6KR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	ATPases associated with a variety of cellular activities	-	-	-	ko:K01995,ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_5798531_2	1297865.APJD01000005_gene3745	7.257e-183	574.0	COG4177@1|root,COG4177@2|Bacteria,1MUXQ@1224|Proteobacteria,2TUA1@28211|Alphaproteobacteria,3JUQE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	-	-	-	ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_5798531_3	1297865.APJD01000005_gene3744	2.608e-172	544.0	COG0559@1|root,COG0559@2|Bacteria,1R23K@1224|Proteobacteria,2TTCX@28211|Alphaproteobacteria,3JUNY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	-	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_5798531_1	1297865.APJD01000005_gene3743	1.512e-259	801.0	COG0683@1|root,COG0683@2|Bacteria,1MXPJ@1224|Proteobacteria,2TSZ5@28211|Alphaproteobacteria,3JVDI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_5800856_3	1297865.APJD01000015_gene3458	2.802e-239	739.0	COG2072@1|root,COG2072@2|Bacteria,1MU71@1224|Proteobacteria,2TV2E@28211|Alphaproteobacteria,3JQVH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	MA20_07830	-	-	-	-	-	-	-	-	-	-	-	FMO-like,NAD_binding_8
SX1_k127_5800856_7	1297865.APJD01000015_gene3457	1.072e-128	413.0	COG1309@1|root,COG1309@2|Bacteria,1MZE6@1224|Proteobacteria,2U412@28211|Alphaproteobacteria,3JXNZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_5800856_8	1297865.APJD01000015_gene3456	1.855e-128	412.0	2A6DA@1|root,30V66@2|Bacteria,1R7KZ@1224|Proteobacteria,2TWKR@28211|Alphaproteobacteria,3JWWJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5800856_10	1297865.APJD01000015_gene3455	1.123e-93	319.0	COG2340@1|root,COG2340@2|Bacteria,1MXPQ@1224|Proteobacteria,2V4H6@28211|Alphaproteobacteria,3JWQG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Cysteine-rich secretory protein family	MA20_41405	-	-	-	-	-	-	-	-	-	-	-	CAP
SX1_k127_5800856_4	1297865.APJD01000015_gene3454	7.906e-206	643.0	COG1893@1|root,COG1893@2|Bacteria,1N0M5@1224|Proteobacteria,2TTAN@28211|Alphaproteobacteria,3JQZK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid	-	-	1.1.1.169	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	M00119	R02472	RC00726	ko00000,ko00001,ko00002,ko01000	-	-	-	ApbA,ApbA_C
SX1_k127_5800856_9	172088.AUGA01000006_gene8245	1.657e-109	358.0	COG3753@1|root,COG3753@2|Bacteria,1N7FF@1224|Proteobacteria,2UI50@28211|Alphaproteobacteria,3JQQU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bacterial protein of unknown function (DUF937)	-	-	-	-	-	-	-	-	-	-	-	-	DUF937
SX1_k127_5800856_12	1297865.APJD01000015_gene3452	1.131e-53	189.0	COG2261@1|root,COG2261@2|Bacteria,1N72W@1224|Proteobacteria,2UBU4@28211|Alphaproteobacteria,3K02F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Transglycosylase associated protein	MA20_40075	-	-	-	-	-	-	-	-	-	-	-	Transgly_assoc
SX1_k127_5800856_6	1297865.APJD01000015_gene3451	1.092e-158	505.0	COG1028@1|root,COG1028@2|Bacteria,1PEWK@1224|Proteobacteria,2TV4E@28211|Alphaproteobacteria,3JS5C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	MA20_40070	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
SX1_k127_5800856_5	1297865.APJD01000015_gene3450	1.461e-168	530.0	COG0491@1|root,COG0491@2|Bacteria,1PHBX@1224|Proteobacteria,2TVDN@28211|Alphaproteobacteria,3JS6E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metallo-beta-lactamase superfamily	-	-	3.1.1.81	ko:K13075	ko02024,map02024	-	R08970	RC00713	ko00000,ko00001,ko01000	-	-	-	Lactamase_B
SX1_k127_5800856_0	1297865.APJD01000015_gene3449	0.0	1121.0	COG0318@1|root,COG0318@2|Bacteria,1MWSD@1224|Proteobacteria,2TU6Y@28211|Alphaproteobacteria,3JUQ4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_5800856_1	1297865.APJD01000015_gene3448	4.384e-259	799.0	COG0683@1|root,COG0683@2|Bacteria,1MUCB@1224|Proteobacteria,2TRWV@28211|Alphaproteobacteria,3K2NT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_5800856_2	1297865.APJD01000015_gene3447	4.512e-245	784.0	COG1902@1|root,COG1902@2|Bacteria,1MVE0@1224|Proteobacteria,2TQPY@28211|Alphaproteobacteria,3JTE3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NADH:flavin oxidoreductase / NADH oxidase family	-	-	-	-	-	-	-	-	-	-	-	-	Oxidored_FMN
SX1_k127_5800856_11	1297865.APJD01000015_gene3446	7.603e-68	250.0	COG1414@1|root,COG1414@2|Bacteria,1RFSY@1224|Proteobacteria,2U3M4@28211|Alphaproteobacteria,3JZH2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	IclR helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_IclR,IclR
SX1_k127_5808506_4	1230476.C207_06157	3.485e-197	615.0	COG2816@1|root,COG2816@2|Bacteria,1MV1F@1224|Proteobacteria,2TTRT@28211|Alphaproteobacteria,3JSNJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	COG1180 Pyruvate-formate lyase-activating enzyme	MA20_26535	-	1.3.7.1	ko:K20449	ko00760,ko01120,map00760,map01120	-	R03164	RC02422	ko00000,ko00001,ko01000	-	-	-	-
SX1_k127_5808506_7	1297865.APJD01000007_gene2289	1.247e-98	324.0	COG2080@1|root,COG2080@2|Bacteria,1RD8C@1224|Proteobacteria,2U7NJ@28211|Alphaproteobacteria,3JTBW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	[2Fe-2S] binding domain	MA20_26530	-	1.17.2.1,1.3.99.16	ko:K07302,ko:K18029	ko00760,ko01120,map00760,map01120	M00622	R09473	RC00589	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2,Fer2_2
SX1_k127_5808506_0	1297865.APJD01000007_gene2288	0.0	2369.0	COG1529@1|root,COG2010@1|root,COG1529@2|Bacteria,COG2010@2|Bacteria,1MV6D@1224|Proteobacteria,2TVYT@28211|Alphaproteobacteria,3K6MK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain	MA20_26525	-	1.17.2.1	ko:K18030	ko00760,ko01120,map00760,map01120	M00622	R09473	RC00589	ko00000,ko00001,ko00002,ko01000	-	-	-	Ald_Xan_dh_C2,Cytochrom_C,Cytochrome_CBB3
SX1_k127_5808506_1	1297865.APJD01000007_gene2287	6.158e-301	923.0	COG1488@1|root,COG1488@2|Bacteria,1MV8U@1224|Proteobacteria,2TREY@28211|Alphaproteobacteria,3JSUW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP	pncB	-	6.3.4.21	ko:K00763	ko00760,ko01100,map00760,map01100	-	R01724	RC00033	ko00000,ko00001,ko01000	-	-	-	NAPRTase
SX1_k127_5808506_2	1297865.APJD01000007_gene2286	2.184e-281	865.0	COG2873@1|root,COG2873@2|Bacteria,1NQME@1224|Proteobacteria,2TQW9@28211|Alphaproteobacteria,3JQPZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	DegT/DnrJ/EryC1/StrS aminotransferase family	MA20_21405	-	2.5.1.49	ko:K01740	ko00270,ko01100,map00270,map01100	-	R01287,R04859	RC00020,RC02821,RC02848	ko00000,ko00001,ko01000	-	-	-	Cys_Met_Meta_PP
SX1_k127_5808506_5	1297865.APJD01000007_gene2285	1.008e-160	510.0	COG2267@1|root,COG2267@2|Bacteria,1Q6AF@1224|Proteobacteria,2U163@28211|Alphaproteobacteria,3JSQF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Serine aminopeptidase, S33	MA20_21410	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_4,Abhydrolase_6
SX1_k127_5808506_3	1297865.APJD01000007_gene2284	4.767e-218	678.0	COG1835@1|root,COG1835@2|Bacteria,1RICE@1224|Proteobacteria,2U9YK@28211|Alphaproteobacteria	28211|Alphaproteobacteria	I	PFAM acyltransferase 3	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
SX1_k127_5808506_6	1297865.APJD01000007_gene2283	2.733e-123	396.0	COG0265@1|root,COG0265@2|Bacteria,1N58P@1224|Proteobacteria,2TTTZ@28211|Alphaproteobacteria,3JTX9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Trypsin	MA20_17565	-	-	-	-	-	-	-	-	-	-	-	PDZ_2,Trypsin_2
SX1_k127_582530_0	1297865.APJD01000014_gene616	0.0	1073.0	COG1132@1|root,COG1132@2|Bacteria,1MXRE@1224|Proteobacteria,2U0R9@28211|Alphaproteobacteria,3JXJ2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	ABC transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC_membrane,ABC_tran
SX1_k127_582530_7	1297865.APJD01000014_gene615	1.375e-42	161.0	2AFME@1|root,315NQ@2|Bacteria,1NE70@1224|Proteobacteria,2UHK5@28211|Alphaproteobacteria,3K1BT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_582530_8	1297865.APJD01000014_gene614	5.513e-29	118.0	2AEV3@1|root,314SI@2|Bacteria,1NBA5@1224|Proteobacteria,2UF61@28211|Alphaproteobacteria,3K1DD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_582530_2	1297865.APJD01000014_gene613	1.701e-197	617.0	COG0596@1|root,COG0596@2|Bacteria,1MUSF@1224|Proteobacteria,2TSK5@28211|Alphaproteobacteria,3JS6T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Alpha/beta hydrolase family	dhmA	-	3.8.1.5	ko:K01563	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	-	R05284,R05367,R05368,R05369,R05370,R07669,R07670	RC01317,RC01340,RC01341,RC02013	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1
SX1_k127_582530_6	1297865.APJD01000014_gene612	1.854e-139	445.0	COG1024@1|root,COG1024@2|Bacteria,1N2V7@1224|Proteobacteria,2U4VQ@28211|Alphaproteobacteria,3JXKI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	-	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_582530_1	1297865.APJD01000014_gene611	1.497e-202	633.0	COG0604@1|root,COG0604@2|Bacteria,1MWRK@1224|Proteobacteria,2TSPW@28211|Alphaproteobacteria,3JVTH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Zinc-binding dehydrogenase	-	-	1.6.5.5	ko:K00344	-	-	-	-	ko00000,ko01000	-	-	-	ADH_N,ADH_zinc_N
SX1_k127_582530_5	1297865.APJD01000014_gene610	4.565e-160	507.0	COG1291@1|root,COG1291@2|Bacteria,1MXK3@1224|Proteobacteria,2TTXY@28211|Alphaproteobacteria,3JRM7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	MotA/TolQ/ExbB proton channel family	motA	-	-	ko:K02556	ko02020,ko02030,ko02040,map02020,map02030,map02040	-	-	-	ko00000,ko00001,ko02000,ko02035	1.A.30.1	-	-	MotA_ExbB
SX1_k127_582530_4	1297865.APJD01000014_gene609	1.384e-174	548.0	COG1360@1|root,COG1360@2|Bacteria,1MW1Y@1224|Proteobacteria,2TTW2@28211|Alphaproteobacteria,3JTBX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	PFAM OmpA MotB domain protein	motB	-	-	ko:K02557	ko02030,ko02040,map02030,map02040	-	-	-	ko00000,ko00001,ko02000,ko02035	1.A.30.1	-	-	MotB_plug,OmpA
SX1_k127_582530_3	1297865.APJD01000014_gene608	7.289e-193	604.0	COG3158@1|root,COG3158@2|Bacteria,1MUVH@1224|Proteobacteria,2TRVJ@28211|Alphaproteobacteria,3JQUM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Transport of potassium into the cell	kup	GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662	-	ko:K03549	-	-	-	-	ko00000,ko02000	2.A.72	-	-	K_trans
SX1_k127_5826020_3	1297865.APJD01000005_gene3994	2.334e-192	601.0	COG0161@1|root,COG0161@2|Bacteria,1MU2N@1224|Proteobacteria,2TQND@28211|Alphaproteobacteria,3JQS8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	-	-	2.6.1.55	ko:K15372	ko00410,ko00430,ko01100,map00410,map00430,map01100	-	R00908,R01684	RC00006,RC00062	ko00000,ko00001,ko01000	-	-	-	Aminotran_3
SX1_k127_5826020_4	1230476.C207_06795	2.801e-133	432.0	COG1011@1|root,COG1011@2|Bacteria,1N73G@1224|Proteobacteria,2TVJH@28211|Alphaproteobacteria,3JT4G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Haloacid dehalogenase-like hydrolase	-	-	-	ko:K07025	-	-	-	-	ko00000	-	-	-	HAD_2
SX1_k127_5826020_2	1297865.APJD01000005_gene3996	1.611e-263	814.0	COG5441@1|root,COG5441@2|Bacteria,1MX45@1224|Proteobacteria,2TUHA@28211|Alphaproteobacteria,3JVPF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterised protein family (UPF0261)	-	-	-	-	-	-	-	-	-	-	-	-	UPF0261
SX1_k127_5826020_0	1297865.APJD01000005_gene3997	2.699e-313	961.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,3JS1H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde dehydrogenase family	puuC	-	1.2.1.3,1.2.1.99	ko:K00128,ko:K09472	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	M00135,M00136	R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R07417,R07418,R08146	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
SX1_k127_5826020_1	1297865.APJD01000005_gene3998	3.718e-271	845.0	COG0001@1|root,COG0001@2|Bacteria,1MUY5@1224|Proteobacteria,2TT6G@28211|Alphaproteobacteria,3JWEQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Aminotransferase class-III	-	-	5.4.3.8	ko:K01845	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R02272	RC00677	ko00000,ko00001,ko00002,ko01000,ko01007	-	-	-	Aminotran_3
SX1_k127_5829910_0	1297865.APJD01000020_gene44	1.384e-313	967.0	COG1629@1|root,COG4771@2|Bacteria,1QV6G@1224|Proteobacteria,2TWBK@28211|Alphaproteobacteria,3K2VJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SX1_k127_5829910_1	1297865.APJD01000020_gene43	7.722e-244	755.0	COG0665@1|root,COG0665@2|Bacteria,1R652@1224|Proteobacteria,2TV72@28211|Alphaproteobacteria,3JWWU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	FAD dependent oxidoreductase	solA	-	-	-	-	-	-	-	-	-	-	-	DAO
SX1_k127_5833647_0	1297865.APJD01000002_gene4152	3.794e-300	921.0	COG1014@1|root,COG4231@1|root,COG1014@2|Bacteria,COG4231@2|Bacteria,1MUKS@1224|Proteobacteria,2TSHH@28211|Alphaproteobacteria,3JSRZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Pyruvate ferredoxin/flavodoxin oxidoreductase	MA20_35585	-	1.2.7.8	ko:K04090	-	-	-	-	br01601,ko00000,ko01000	-	-	-	POR,TPP_enzyme_C
SX1_k127_583888_1	1297865.APJD01000023_gene1052	3.74e-165	533.0	COG1804@1|root,COG1804@2|Bacteria,1MU4A@1224|Proteobacteria,2TRSB@28211|Alphaproteobacteria,3JR7A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA-transferase family III	MA20_04515	-	2.8.3.16	ko:K07749	-	-	-	-	ko00000,ko01000	-	-	-	CoA_transf_3
SX1_k127_583888_0	1297865.APJD01000023_gene1051	1.647e-252	781.0	COG1960@1|root,COG1960@2|Bacteria,1MVAH@1224|Proteobacteria,2TR02@28211|Alphaproteobacteria,3JR31@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	acyl-CoA dehydrogenase	MA20_04510	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_583888_2	1297865.APJD01000023_gene1050	3.31e-132	422.0	COG0583@1|root,COG0583@2|Bacteria,1MXR1@1224|Proteobacteria,2TRA1@28211|Alphaproteobacteria,3JSTX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR family	MA20_04505	-	-	ko:K19338	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
SX1_k127_5845321_0	1297865.APJD01000026_gene2395	1.529e-209	652.0	COG3158@1|root,COG3158@2|Bacteria,1MUVH@1224|Proteobacteria,2TRVJ@28211|Alphaproteobacteria,3JTDY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Transport of potassium into the cell	kup3	GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662	-	ko:K03549	-	-	-	-	ko00000,ko02000	2.A.72	-	-	K_trans
SX1_k127_5845321_1	1297865.APJD01000026_gene2394	3.165e-207	649.0	COG3173@1|root,COG3173@2|Bacteria,1QPYD@1224|Proteobacteria,2TSV1@28211|Alphaproteobacteria,3JWZX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Phosphotransferase enzyme family	-	-	-	-	-	-	-	-	-	-	-	-	APH
SX1_k127_5845321_2	1297865.APJD01000026_gene2393	1.737e-76	256.0	COG0188@1|root,COG0188@2|Bacteria,1MUGG@1224|Proteobacteria,2TSPQ@28211|Alphaproteobacteria,3JSSS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner	gyrA	-	5.99.1.3	ko:K02469	-	-	-	-	ko00000,ko01000,ko03032,ko03400	-	-	-	DNA_gyraseA_C,DNA_topoisoIV
SX1_k127_5851394_1	1297865.APJD01000021_gene3033	1.315e-36	138.0	COG2080@1|root,COG2080@2|Bacteria,1RD8C@1224|Proteobacteria,2U5BM@28211|Alphaproteobacteria,3JSU8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	[2Fe-2S] binding domain	coxS	-	1.2.5.3	ko:K03518	-	-	R11168	RC02800	ko00000,ko01000	-	-	-	Fer2,Fer2_2
SX1_k127_5851394_0	172088.AUGA01000013_gene7422	0.0	1033.0	COG1529@1|root,COG1529@2|Bacteria,1MUEA@1224|Proteobacteria,2TQMW@28211|Alphaproteobacteria,3JR85@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain	coxL	-	1.2.5.3	ko:K03520	-	-	R11168	RC02800	ko00000,ko01000	-	-	-	Ald_Xan_dh_C,Ald_Xan_dh_C2
SX1_k127_5852138_2	1297865.APJD01000010_gene4947	3.167e-89	295.0	COG1733@1|root,COG1733@2|Bacteria,1RIZT@1224|Proteobacteria,2U7SS@28211|Alphaproteobacteria,3JS0E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	HxlR-like helix-turn-helix	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
SX1_k127_5852138_1	1297865.APJD01000010_gene4948	3.658e-158	500.0	COG1028@1|root,COG1028@2|Bacteria,1MXNY@1224|Proteobacteria,2U126@28211|Alphaproteobacteria,3JQUN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	MA20_36375	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_5852138_4	1230476.C207_04183	1.992e-15	79.0	2CEIK@1|root,3023X@2|Bacteria,1NB6U@1224|Proteobacteria,2UG57@28211|Alphaproteobacteria,3K1EW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5852138_0	1297865.APJD01000010_gene4950	4.36e-183	574.0	COG0583@1|root,COG0583@2|Bacteria,1NSNV@1224|Proteobacteria,2U010@28211|Alphaproteobacteria,3JU9J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_5864844_3	1297865.APJD01000047_gene4825	7.401e-168	528.0	COG0620@1|root,COG0620@2|Bacteria,1MV2Z@1224|Proteobacteria,2TSRH@28211|Alphaproteobacteria,3JTC4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Cobalamin-independent synthase, Catalytic domain	MA20_07800	-	2.1.1.14	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	M00017	R04405,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	Meth_synt_2
SX1_k127_5864844_4	1297865.APJD01000047_gene4826	2.53e-147	469.0	COG0410@1|root,COG0410@2|Bacteria,1MUFR@1224|Proteobacteria,2TUBS@28211|Alphaproteobacteria,3JU4Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ATPases associated with a variety of cellular activities	MA20_07795	-	-	ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran
SX1_k127_5864844_5	335659.S23_22940	2.399e-126	434.0	COG0411@1|root,COG0411@2|Bacteria,1MXHT@1224|Proteobacteria,2TSIU@28211|Alphaproteobacteria,3JSQI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid ATP-binding cassette transporter	MA20_07790	-	-	ko:K01995,ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_5864844_1	1297865.APJD01000047_gene4828	1.041e-197	618.0	COG4177@1|root,COG4177@2|Bacteria,1MYF5@1224|Proteobacteria,2TUHM@28211|Alphaproteobacteria,3JS6G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	MA20_07785	-	-	ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_5864844_2	1297865.APJD01000047_gene4829	6.193e-179	561.0	COG0559@1|root,COG0559@2|Bacteria,1NQYP@1224|Proteobacteria,2TSH6@28211|Alphaproteobacteria,3JTVZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	MA20_07780	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_5864844_0	1297865.APJD01000047_gene4830	3.651e-249	772.0	COG0683@1|root,COG0683@2|Bacteria,1MV3Y@1224|Proteobacteria,2TU2B@28211|Alphaproteobacteria,3JQS1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	MA20_07775	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_5882164_5	1297865.APJD01000036_gene1467	1.231e-100	328.0	COG1520@1|root,COG2010@1|root,COG1520@2|Bacteria,COG2010@2|Bacteria,1PIDE@1224|Proteobacteria,2TTS3@28211|Alphaproteobacteria,3JVPI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	PQQ-like domain	-	-	1.1.2.6	ko:K05889	-	-	R03136	-	ko00000,ko01000	-	-	-	Cytochrome_CBB3,PQQ,PQQ_2,PQQ_3
SX1_k127_5882164_0	1297865.APJD01000036_gene1466	8.558e-269	827.0	COG0683@1|root,COG0683@2|Bacteria,1MWR8@1224|Proteobacteria,2U207@28211|Alphaproteobacteria,3JXM6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_5882164_3	1297865.APJD01000036_gene1465	3.335e-157	501.0	COG0204@1|root,COG0204@2|Bacteria,1MY51@1224|Proteobacteria,2TT3P@28211|Alphaproteobacteria,3JS46@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Phosphate acyltransferases	plsC	-	2.3.1.51	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R02241,R09381	RC00004,RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyltransferase
SX1_k127_5882164_4	1297865.APJD01000036_gene1464	7.572e-151	477.0	COG1434@1|root,COG1434@2|Bacteria,1RHMV@1224|Proteobacteria,2U957@28211|Alphaproteobacteria,3JTVW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	DUF218 domain	MA20_20455	-	-	-	-	-	-	-	-	-	-	-	DUF218
SX1_k127_5882164_1	1297865.APJD01000036_gene1463	1.833e-195	612.0	COG2177@1|root,COG2177@2|Bacteria,1MXKQ@1224|Proteobacteria,2TSNT@28211|Alphaproteobacteria,3JUMC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	Cell division protein	ftsX	-	-	ko:K09811	ko02010,map02010	M00256	-	-	ko00000,ko00001,ko00002,ko02000,ko03036	3.A.1.140	-	-	-
SX1_k127_5882164_6	648885.KB316283_gene4005	1.023e-99	331.0	COG2884@1|root,COG2884@2|Bacteria,1MVQ4@1224|Proteobacteria,2TS9Y@28211|Alphaproteobacteria,1JRXJ@119045|Methylobacteriaceae	28211|Alphaproteobacteria	D	TIGRFAM cell division ATP-binding protein FtsE	ftsE	-	-	ko:K09812	ko02010,map02010	M00256	-	-	ko00000,ko00001,ko00002,ko02000,ko03036	3.A.1.140	-	-	ABC_tran
SX1_k127_5882164_2	1230476.C207_05128	8.72e-162	512.0	2E521@1|root,32ZVA@2|Bacteria,1N9PP@1224|Proteobacteria,2UG1E@28211|Alphaproteobacteria,3JVB9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	TIGRFAM MJ0042 family finger-like protein	-	-	-	-	-	-	-	-	-	-	-	-	DUF3426,zinc_ribbon_4
SX1_k127_5882164_7	1297865.APJD01000036_gene1460	2.924e-70	238.0	COG0745@1|root,COG0745@2|Bacteria,1MZ8W@1224|Proteobacteria,2U9PK@28211|Alphaproteobacteria,3JZ2V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	cheY-homologous receiver domain	MA20_20475	-	-	-	-	-	-	-	-	-	-	-	Response_reg
SX1_k127_5882164_8	398525.KB900701_gene591	7.671e-24	100.0	COG0419@1|root,COG0419@2|Bacteria,1MWCT@1224|Proteobacteria,2TS61@28211|Alphaproteobacteria,3K6Q4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Domain of unknown function (DUF4175)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4175
SX1_k127_588371_0	1297865.APJD01000006_gene4624	0.0	1930.0	COG2982@1|root,COG2982@2|Bacteria,1MUNH@1224|Proteobacteria,2TT0W@28211|Alphaproteobacteria,3JRU3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	AsmA-like C-terminal region	asmA	-	-	ko:K07289	-	-	-	-	ko00000	-	-	-	AsmA,AsmA_2
SX1_k127_588371_1	1297865.APJD01000006_gene4623	2.958e-275	847.0	COG2124@1|root,COG2124@2|Bacteria,1MY5H@1224|Proteobacteria,2TTRR@28211|Alphaproteobacteria,3JUUG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Cytochrome P450	MA20_02150	-	-	-	-	-	-	-	-	-	-	-	p450
SX1_k127_588371_2	1297865.APJD01000006_gene4622	5.311e-124	398.0	COG1309@1|root,COG1309@2|Bacteria,1MWKF@1224|Proteobacteria,2TRES@28211|Alphaproteobacteria,3JQWM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	MA20_02145	-	-	-	-	-	-	-	-	-	-	-	TetR_C_6,TetR_N
SX1_k127_588371_3	1297865.APJD01000006_gene4621	1.414e-107	348.0	COG2271@1|root,COG2271@2|Bacteria,1QTW2@1224|Proteobacteria,2U07Z@28211|Alphaproteobacteria,3JR8H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	MA20_02120	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_5888138_0	1297865.APJD01000007_gene1747	0.0	1509.0	COG1505@1|root,COG1505@2|Bacteria,1NZ7N@1224|Proteobacteria,2TTAX@28211|Alphaproteobacteria,3JVNG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Prolyl oligopeptidase	ppcE	-	3.4.21.26	ko:K01322	ko04614,map04614	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S9,Peptidase_S9_N
SX1_k127_5888138_2	1297865.APJD01000007_gene1748	4.909e-202	630.0	COG2207@1|root,COG2207@2|Bacteria,1R8CA@1224|Proteobacteria,2U4FI@28211|Alphaproteobacteria,3JWBC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	AraC-binding-like domain	-	-	-	-	-	-	-	-	-	-	-	-	AraC_binding_2,HTH_18
SX1_k127_5888138_3	1297865.APJD01000007_gene1749	6.032e-37	139.0	2AN55@1|root,31D2Z@2|Bacteria,1P3WV@1224|Proteobacteria,2UVP5@28211|Alphaproteobacteria,3K4TP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5888138_1	1297865.APJD01000007_gene1750	0.0	1230.0	COG0620@1|root,COG0620@2|Bacteria,1MUI9@1224|Proteobacteria,2TU9X@28211|Alphaproteobacteria,3JSEW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation	metE	-	2.1.1.14	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	M00017	R04405,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	Meth_synt_1,Meth_synt_2
SX1_k127_5892753_0	1297865.APJD01000047_gene4778	0.0	1014.0	COG3170@1|root,COG3170@2|Bacteria,1QW8W@1224|Proteobacteria,2TWTD@28211|Alphaproteobacteria,3K6P5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	Apolipoprotein A1/A4/E domain	-	-	-	-	-	-	-	-	-	-	-	-	Apolipoprotein
SX1_k127_5892753_3	1297865.APJD01000047_gene4779	4.638e-176	553.0	COG1463@1|root,COG1463@2|Bacteria,1MU4B@1224|Proteobacteria,2U1JN@28211|Alphaproteobacteria,3JU5J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	MlaD protein	MA20_08125	-	-	ko:K02067	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaD
SX1_k127_5892753_4	1297865.APJD01000047_gene4780	1.637e-158	504.0	COG1127@1|root,COG1127@2|Bacteria,1MUSD@1224|Proteobacteria,2TR2I@28211|Alphaproteobacteria,3JRZD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	ABC transporter	yrbF	-	-	ko:K02065	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	ABC_tran
SX1_k127_5892753_1	1230476.C207_00830	8.415e-221	689.0	COG0767@1|root,COG0767@2|Bacteria,1MVPN@1224|Proteobacteria,2TSGS@28211|Alphaproteobacteria,3JTST@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Permease MlaE	MA20_08115	-	-	ko:K02066	ko02010,map02010	M00210,M00669,M00670	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.27	-	-	MlaE,STAS,STAS_2
SX1_k127_5892753_2	1297865.APJD01000047_gene4782	1.924e-200	627.0	COG4948@1|root,COG4948@2|Bacteria,1MW76@1224|Proteobacteria,2TR16@28211|Alphaproteobacteria,3JUPA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	mandelate racemase muconate lactonizing	ycjG	GO:0003674,GO:0003824,GO:0016853,GO:0016854,GO:0016855	5.1.1.20	ko:K19802	-	-	R10938	RC03309	ko00000,ko01000	-	-	-	MR_MLE_C,MR_MLE_N
SX1_k127_5892753_5	398525.KB900701_gene6216	1.813e-146	466.0	COG0477@1|root,COG2814@2|Bacteria,1MVZI@1224|Proteobacteria,2U5H1@28211|Alphaproteobacteria,3JSND@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Nucleoside H+ symporter	-	-	-	ko:K05820	-	-	-	-	ko00000,ko02000	2.A.1.27	-	-	MFS_1_like
SX1_k127_5899592_6	1297865.APJD01000007_gene2355	3.314e-111	359.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,3JS1H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde dehydrogenase family	-	-	1.2.1.3	ko:K00128	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	M00135	R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
SX1_k127_5899592_3	1297865.APJD01000007_gene2355	8.297e-199	621.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,3JS1H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde dehydrogenase family	-	-	1.2.1.3	ko:K00128	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	M00135	R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
SX1_k127_5899592_2	1297865.APJD01000007_gene2354	1.07e-234	726.0	COG1910@1|root,COG2005@1|root,COG1910@2|Bacteria,COG2005@2|Bacteria,1MVS4@1224|Proteobacteria,2TVB8@28211|Alphaproteobacteria,3JUDZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	PBP superfamily domain	-	-	-	ko:K07219	-	-	-	-	ko00000	-	-	-	HTH_1,HTH_17,PBP_like
SX1_k127_5899592_5	1297865.APJD01000007_gene2353	9.408e-150	476.0	COG0518@1|root,COG0518@2|Bacteria,1MUDH@1224|Proteobacteria,2TU60@28211|Alphaproteobacteria,3JX3D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Glutamine amidotransferase class-I	-	-	6.3.5.2	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	M00050	R01230,R01231,R08244	RC00010,RC00204	ko00000,ko00001,ko00002,ko01000,ko01002	-	-	-	GATase
SX1_k127_5899592_0	1297865.APJD01000007_gene2352	5.224e-308	945.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,3JSVT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde dehydrogenase	-	-	1.2.1.16,1.2.1.20,1.2.1.79	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	M00027	R00713,R00714,R02401	RC00080	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
SX1_k127_5899592_4	1297865.APJD01000007_gene2351	1.357e-168	536.0	COG0500@1|root,COG2226@2|Bacteria,1R439@1224|Proteobacteria,2U0N2@28211|Alphaproteobacteria,3JWUT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
SX1_k127_5899592_7	1297865.APJD01000007_gene2350	3.465e-62	228.0	COG2259@1|root,COG2259@2|Bacteria,1PNBS@1224|Proteobacteria,2VCZ0@28211|Alphaproteobacteria,3JY05@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SURF4 family	-	-	-	ko:K15977	-	-	-	-	ko00000	-	-	-	DoxX
SX1_k127_5899592_1	1297865.APJD01000007_gene2349	9.111e-285	877.0	COG0477@1|root,COG2814@2|Bacteria,1MVQQ@1224|Proteobacteria,2TRBF@28211|Alphaproteobacteria,3JXPV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	benK	-	-	ko:K05548,ko:K08178,ko:K08195	-	-	-	-	ko00000,ko02000	2.A.1.12,2.A.1.15	-	-	MFS_1,MFS_4,Sugar_tr
SX1_k127_5899592_8	1297865.APJD01000007_gene2348	5.403e-17	79.0	COG2159@1|root,COG2159@2|Bacteria,1MXI7@1224|Proteobacteria,2U15G@28211|Alphaproteobacteria,3JVRP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Amidohydrolase	-	-	4.1.1.103,4.1.1.46	ko:K07045,ko:K14333,ko:K15063,ko:K20941	ko00362,ko00627,ko01120,map00362,map00627,map01120	-	R00821,R09278,R11353	RC00390,RC00569	ko00000,ko00001,ko01000	-	-	-	Amidohydro_2
SX1_k127_5903840_5	1297865.APJD01000003_gene6390	1.891e-69	236.0	COG0711@1|root,COG0711@2|Bacteria,1MZGU@1224|Proteobacteria,2UBVW@28211|Alphaproteobacteria,3JR6Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (By similarity)	atpF2	-	-	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt_B
SX1_k127_5903840_4	1297865.APJD01000003_gene6389	2.636e-85	284.0	COG0711@1|root,COG0711@2|Bacteria,1N0P5@1224|Proteobacteria,2U5DD@28211|Alphaproteobacteria,3JY46@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation	atpF	-	-	ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157	-	-	ko00000,ko00001,ko00002,ko00194	3.A.2.1	-	-	ATP-synt_B
SX1_k127_5903840_2	1297865.APJD01000003_gene6388	9.367e-132	421.0	2CB63@1|root,3349C@2|Bacteria,1RKRV@1224|Proteobacteria,2U0FI@28211|Alphaproteobacteria,3JVTI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5903840_3	1230476.C207_02732	1.946e-126	407.0	COG1670@1|root,COG1670@2|Bacteria,1MVG4@1224|Proteobacteria,2TUIK@28211|Alphaproteobacteria,3JTVG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Acetyltransferase (GNAT) domain	rimJ	-	2.3.1.128	ko:K03790	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	Acetyltransf_3
SX1_k127_5903840_1	1297865.APJD01000003_gene6386	2.111e-274	846.0	COG0612@1|root,COG0612@2|Bacteria,1MVST@1224|Proteobacteria,2TR39@28211|Alphaproteobacteria,3JR41@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the peptidase M16 family	mpp	-	-	-	-	-	-	-	-	-	-	-	Peptidase_M16,Peptidase_M16_C
SX1_k127_5903840_0	1297865.APJD01000003_gene6385	4.004e-298	916.0	COG0498@1|root,COG0498@2|Bacteria,1MUWQ@1224|Proteobacteria,2TT0D@28211|Alphaproteobacteria,3JTA4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Threonine synthase N terminus	thrC	GO:0003674,GO:0003824,GO:0004795,GO:0006082,GO:0006520,GO:0006566,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009088,GO:0009987,GO:0016053,GO:0016311,GO:0016829,GO:0016835,GO:0016838,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	4.2.3.1	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	M00018	R01466,R05086	RC00017,RC00526	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP,Thr_synth_N
SX1_k127_5907735_1	1297865.APJD01000005_gene3484	1.752e-310	957.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,3JQU8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde dehydrogenase family	MA20_17005	-	1.2.1.3	ko:K00128	ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130	M00135	R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146	RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldedh
SX1_k127_5907735_2	1297865.APJD01000005_gene3485	1.143e-222	692.0	COG3386@1|root,COG3386@2|Bacteria,1MU0C@1224|Proteobacteria,2TSXG@28211|Alphaproteobacteria,3JV1I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	SMP-30/Gluconolaconase/LRE-like region	-	-	3.1.1.17	ko:K01053,ko:K14274	ko00030,ko00040,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00030,map00040,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220	M00129	R01519,R02427,R02933,R03751	RC00537,RC00713,RC00983	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	SGL
SX1_k127_5907735_3	1297865.APJD01000005_gene3486	3.137e-181	572.0	COG0451@1|root,COG0451@2|Bacteria,1MWVE@1224|Proteobacteria,2TS8F@28211|Alphaproteobacteria,3JU8F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	GM	3-beta hydroxysteroid dehydrogenase/isomerase family	MA20_16995	-	1.1.1.203	ko:K18981	ko00053,map00053	-	R10841	RC00066	ko00000,ko00001,ko01000	-	-	-	Epimerase
SX1_k127_5907735_5	1297865.APJD01000005_gene3487	8.454e-118	381.0	COG5342@1|root,COG5342@2|Bacteria,1R7VC@1224|Proteobacteria,2U4FC@28211|Alphaproteobacteria,3JXYJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	invasion associated locus B	-	-	-	-	-	-	-	-	-	-	-	-	IalB
SX1_k127_5907735_4	1297865.APJD01000005_gene3488	4.204e-144	458.0	COG1802@1|root,COG1802@2|Bacteria,1MXNB@1224|Proteobacteria,2TUI3@28211|Alphaproteobacteria,3JT57@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FCD	-	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SX1_k127_5907735_0	1297865.APJD01000005_gene3489	0.0	1104.0	COG0129@1|root,COG0129@2|Bacteria,1MV4I@1224|Proteobacteria,2TQRW@28211|Alphaproteobacteria,3JT1Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	Belongs to the IlvD Edd family	MA20_16960	-	4.2.1.9	ko:K01687	ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R01209,R04441,R05070	RC00468,RC01714	ko00000,ko00001,ko00002,ko01000	-	-	-	ILVD_EDD
SX1_k127_5911912_8	1230476.C207_05557	2.184e-96	316.0	COG3386@1|root,COG3386@2|Bacteria,1MU0C@1224|Proteobacteria,2TSXG@28211|Alphaproteobacteria,3JTE8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	SMP-30/Gluconolaconase/LRE-like region	-	-	3.1.1.17	ko:K01053,ko:K14274	ko00030,ko00040,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00030,map00040,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220	M00129	R01519,R02427,R02933,R03751	RC00537,RC00713,RC00983	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	SGL
SX1_k127_5911912_3	1297865.APJD01000005_gene3612	4.278e-194	608.0	COG1028@1|root,COG1028@2|Bacteria,1MXNQ@1224|Proteobacteria,2TS6G@28211|Alphaproteobacteria,3JUD7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Dehydrogenase	MA20_16310	-	-	-	-	-	-	-	-	-	-	-	adh_short,adh_short_C2
SX1_k127_5911912_2	1297865.APJD01000005_gene3613	7.252e-252	779.0	COG0183@1|root,COG0183@2|Bacteria,1MUZV@1224|Proteobacteria,2TRHF@28211|Alphaproteobacteria,3JRM3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	acetyl-coa acetyltransferase	MA20_16305	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5911912_9	1297865.APJD01000005_gene3614	2.036e-87	295.0	COG1545@1|root,COG1545@2|Bacteria,1R44D@1224|Proteobacteria,2U5BU@28211|Alphaproteobacteria,3JY08@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Rubredoxin-like zinc ribbon domain (DUF35_N)	MA20_16300	-	-	ko:K07068	-	-	-	-	ko00000	-	-	-	DUF35_N,OB_aCoA_assoc
SX1_k127_5911912_1	1297865.APJD01000005_gene3615	1.278e-269	834.0	COG0683@1|root,COG0683@2|Bacteria,1R6HB@1224|Proteobacteria,2U0JE@28211|Alphaproteobacteria,3JXPQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein domain	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_5911912_6	68219.JNXI01000076_gene2209	3.552e-143	459.0	COG0559@1|root,COG0559@2|Bacteria,2GKAR@201174|Actinobacteria	201174|Actinobacteria	E	Belongs to the binding-protein-dependent transport system permease family	-	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_5911912_4	1297865.APJD01000005_gene3617	2.499e-185	581.0	COG4177@1|root,COG4177@2|Bacteria,1N76B@1224|Proteobacteria,2U1GV@28211|Alphaproteobacteria,3JRXI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	-	-	-	ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_5911912_10	75379.Tint_0917	7.543e-69	242.0	COG0411@1|root,COG0411@2|Bacteria,1R6TG@1224|Proteobacteria,2W1KV@28216|Betaproteobacteria,1KPEP@119065|unclassified Burkholderiales	28216|Betaproteobacteria	E	ATPases associated with a variety of cellular activities	-	-	-	ko:K01995	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran
SX1_k127_5911912_5	1297865.APJD01000005_gene3619	4.782e-149	472.0	COG0410@1|root,COG0410@2|Bacteria,1R89S@1224|Proteobacteria,2U393@28211|Alphaproteobacteria,3JX6F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ABC transporter	-	-	-	-	-	-	-	-	-	-	-	-	ABC_tran
SX1_k127_5911912_0	1297865.APJD01000005_gene3620	5.899e-283	871.0	COG0154@1|root,COG0154@2|Bacteria,1MU51@1224|Proteobacteria,2TSYS@28211|Alphaproteobacteria,3JQW9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Amidase	MA20_16295	-	6.3.5.6,6.3.5.7	ko:K02433	ko00970,ko01100,map00970,map01100	-	R03905,R04212	RC00010	ko00000,ko00001,ko01000,ko03029	-	-	-	Amidase
SX1_k127_5911912_7	316058.RPB_3585	1.006e-108	356.0	COG0179@1|root,COG0179@2|Bacteria,1R4GE@1224|Proteobacteria,2TTZ5@28211|Alphaproteobacteria,3JUK2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Protein of unknown function (DUF2848)	MA20_16290	-	-	-	-	-	-	-	-	-	-	-	DUF2848
SX1_k127_5918528_2	1297865.APJD01000033_gene7041	1.482e-12	68.0	COG0779@1|root,COG0779@2|Bacteria,1RDP2@1224|Proteobacteria,2TS4E@28211|Alphaproteobacteria,3JTND@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Required for maturation of 30S ribosomal subunits	rimP	GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576	-	ko:K09748	-	-	-	-	ko00000,ko03009	-	-	-	DUF150,DUF150_C
SX1_k127_5918528_0	1297865.APJD01000033_gene7040	1.097e-223	695.0	COG5330@1|root,COG5330@2|Bacteria,1R3VY@1224|Proteobacteria,2TSZ2@28211|Alphaproteobacteria,3JV4H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterised protein conserved in bacteria (DUF2336)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2336
SX1_k127_5918528_1	398525.KB900701_gene1405	7.311e-172	542.0	COG5285@1|root,COG5285@2|Bacteria,1QRDD@1224|Proteobacteria,2U0EC@28211|Alphaproteobacteria,3JQYY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Phytanoyl-CoA dioxygenase (PhyH)	-	-	-	-	-	-	-	-	-	-	-	-	PhyH
SX1_k127_5922080_0	1297865.APJD01000003_gene6139	1.818e-198	621.0	COG0477@1|root,COG2814@2|Bacteria,1QWJJ@1224|Proteobacteria,2TWZP@28211|Alphaproteobacteria,3JSYC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	MA20_22870	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_5922080_1	1297865.APJD01000003_gene6138	5.426e-149	473.0	COG4798@1|root,COG4798@2|Bacteria,1NNHX@1224|Proteobacteria,2TVU9@28211|Alphaproteobacteria,3JUSH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	methyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	Ubie_methyltran
SX1_k127_5922080_2	172088.AUGA01000013_gene7296	3.242e-54	192.0	COG1136@1|root,COG1136@2|Bacteria,1NCFC@1224|Proteobacteria,2TSNF@28211|Alphaproteobacteria,3JV6H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	ABC transporter	MA20_22875	-	-	ko:K02003	-	M00258	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
SX1_k127_5926246_8	1297865.APJD01000005_gene3562	1.061e-123	397.0	COG2391@1|root,COG2391@2|Bacteria,1MXSE@1224|Proteobacteria,2TRUQ@28211|Alphaproteobacteria,3JS3X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sulphur transport	-	-	-	ko:K07112	-	-	-	-	ko00000	-	-	-	Sulf_transp
SX1_k127_5926246_12	1411123.JQNH01000001_gene867	2.373e-50	186.0	COG0546@1|root,COG0546@2|Bacteria,1RDA7@1224|Proteobacteria,2U703@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	HAD-superfamily hydrolase subfamily IA, variant 1	ppaX	-	3.1.3.18	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	-	R01334	RC00017	ko00000,ko00001,ko01000	-	-	-	HAD_2
SX1_k127_5926246_9	1041138.KB890222_gene378	8.039e-76	259.0	COG0698@1|root,COG0698@2|Bacteria,1RHBF@1224|Proteobacteria,2U94R@28211|Alphaproteobacteria,4B8RP@82115|Rhizobiaceae	28211|Alphaproteobacteria	G	Ribose/Galactose Isomerase	rpiB	-	5.3.1.6	ko:K01808	ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01056,R09030	RC00376,RC00434	ko00000,ko00001,ko00002,ko01000	-	-	-	LacAB_rpiB
SX1_k127_5926246_10	709797.CSIRO_2870	1.46e-68	236.0	COG0669@1|root,COG0669@2|Bacteria,1RD9F@1224|Proteobacteria,2U74H@28211|Alphaproteobacteria,3JV4W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate	coaD	-	2.7.7.3	ko:K00954	ko00770,ko01100,map00770,map01100	M00120	R03035	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_transf_like
SX1_k127_5926246_5	172088.AUGA01000002_gene5814	1.819e-177	559.0	COG0697@1|root,COG0697@2|Bacteria,1P38S@1224|Proteobacteria,2U1BY@28211|Alphaproteobacteria,3JR3W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_5926246_1	1297865.APJD01000005_gene3565	1.061e-306	941.0	COG1167@1|root,COG1167@2|Bacteria,1MVGT@1224|Proteobacteria,2TRK7@28211|Alphaproteobacteria,3JRN2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EK	Bacterial regulatory proteins, gntR family	-	-	-	ko:K00375	-	-	-	-	ko00000,ko03000	-	-	-	Aminotran_1_2,GntR
SX1_k127_5926246_4	1297865.APJD01000005_gene3566	2.905e-264	816.0	COG1073@1|root,COG1765@1|root,COG1073@2|Bacteria,COG1765@2|Bacteria,1N2BT@1224|Proteobacteria,2TQN7@28211|Alphaproteobacteria,3JQSS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	OsmC-like protein	MA20_16590	-	-	ko:K06889,ko:K07397	-	-	-	-	ko00000	-	-	-	Hydrolase_4,OsmC
SX1_k127_5926246_6	1297865.APJD01000005_gene3567	9.16e-154	484.0	COG2041@1|root,COG2041@2|Bacteria,1MWZK@1224|Proteobacteria,2TTCH@28211|Alphaproteobacteria,3JUNV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Oxidoreductase molybdopterin binding domain	yuiH	-	-	-	-	-	-	-	-	-	-	-	Oxidored_molyb
SX1_k127_5926246_3	1297865.APJD01000005_gene3568	1.272e-286	880.0	COG0477@1|root,COG0477@2|Bacteria,1MVZG@1224|Proteobacteria,2TRS1@28211|Alphaproteobacteria,3JRAC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	kgtP	-	-	ko:K03761	-	-	-	-	ko00000,ko02000	2.A.1.6.2	-	-	Sugar_tr
SX1_k127_5926246_2	1297865.APJD01000005_gene3569	2.836e-291	899.0	COG2124@1|root,COG2124@2|Bacteria,1MY5H@1224|Proteobacteria,2TR6X@28211|Alphaproteobacteria,3JU3Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Cytochrome P450	MA20_16575	-	-	-	-	-	-	-	-	-	-	-	p450
SX1_k127_5926246_13	1297865.APJD01000005_gene3570	5.865e-40	149.0	COG1141@1|root,COG1141@2|Bacteria,1MZJU@1224|Proteobacteria,2UCKK@28211|Alphaproteobacteria,3K07G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	4Fe-4S single cluster domain of Ferredoxin I	MA20_16570	-	-	ko:K05337	-	-	-	-	ko00000	-	-	-	Fer4_15
SX1_k127_5926246_7	1297865.APJD01000005_gene3571	1.181e-126	407.0	COG1309@1|root,COG1309@2|Bacteria,1NJ0Y@1224|Proteobacteria,2TVAJ@28211|Alphaproteobacteria,3JRD1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	WHG domain	MA20_16565	-	-	-	-	-	-	-	-	-	-	-	TetR_N,WHG
SX1_k127_5926246_0	1297865.APJD01000005_gene3572	1.647e-307	943.0	COG0154@1|root,COG0154@2|Bacteria,1MW3Z@1224|Proteobacteria,2TS56@28211|Alphaproteobacteria,3JS92@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Amidase	MA20_16525	-	3.5.1.4	ko:K01426	ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120	-	R02540,R03096,R03180,R03909,R05551,R05590	RC00010,RC00100,RC00950,RC01025	ko00000,ko00001,ko01000	-	-	-	Amidase
SX1_k127_5926246_11	1297865.APJD01000005_gene3573	8.878e-57	198.0	COG0657@1|root,COG0657@2|Bacteria,1MV3J@1224|Proteobacteria,2TUQ3@28211|Alphaproteobacteria,3JWES@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	alpha/beta hydrolase fold	-	-	3.5.1.9	ko:K01432	ko00380,ko00630,ko01100,map00380,map00630,map01100	M00038	R00988,R01959,R04911	RC00263,RC00323	ko00000,ko00001,ko00002,ko01000	-	-	-	Abhydrolase_3
SX1_k127_5941212_1	1297865.APJD01000005_gene3672	3.364e-284	873.0	COG2271@1|root,COG2271@2|Bacteria,1MX4V@1224|Proteobacteria,2U6FF@28211|Alphaproteobacteria,3JWSX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	uhpC	-	-	ko:K02445	-	-	-	-	ko00000,ko02000	2.A.1.4.3	-	-	MFS_1
SX1_k127_5941212_11	1230476.C207_05619	0.0009726	42.0	2ADM9@1|root,313BY@2|Bacteria,1N686@1224|Proteobacteria,2UF26@28211|Alphaproteobacteria,3K0UJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5941212_9	1297865.APJD01000005_gene3671	1.05e-44	164.0	2ADM9@1|root,313BY@2|Bacteria,1N686@1224|Proteobacteria,2UF26@28211|Alphaproteobacteria,3K0UJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5941212_6	1038859.AXAU01000025_gene4069	1.945e-71	244.0	COG3791@1|root,COG3791@2|Bacteria,1N6S5@1224|Proteobacteria,2UB03@28211|Alphaproteobacteria,3JYB6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Glutathione-dependent formaldehyde-activating enzyme	-	-	-	-	-	-	-	-	-	-	-	-	GFA
SX1_k127_5941212_2	1297865.APJD01000005_gene3669	8.72e-213	661.0	COG1409@1|root,COG1409@2|Bacteria,1MUQJ@1224|Proteobacteria,2TTSK@28211|Alphaproteobacteria,3JQXS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Calcineurin-like phosphoesterase	-	-	-	-	-	-	-	-	-	-	-	-	Metallophos
SX1_k127_5941212_7	1297865.APJD01000005_gene3668	1.024e-67	230.0	COG3794@1|root,COG3794@2|Bacteria,1RI9G@1224|Proteobacteria,2U7KA@28211|Alphaproteobacteria,3JYXK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Copper binding proteins, plastocyanin/azurin family	-	-	-	-	-	-	-	-	-	-	-	-	Copper-bind,Cupredoxin_1
SX1_k127_5941212_5	1297865.APJD01000005_gene3667	2.785e-115	374.0	COG1595@1|root,COG1595@2|Bacteria,1NRNT@1224|Proteobacteria,2TT5K@28211|Alphaproteobacteria,3JTET@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
SX1_k127_5941212_3	1297865.APJD01000005_gene3666	1.68e-161	513.0	COG5662@1|root,COG5662@2|Bacteria,1MV95@1224|Proteobacteria,2TVRG@28211|Alphaproteobacteria,3JRXS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Putative zinc-finger	-	-	-	-	-	-	-	-	-	-	-	-	zf-HC2
SX1_k127_5941212_0	1230476.C207_05614	1.421e-302	928.0	COG4992@1|root,COG4992@2|Bacteria,1R6U9@1224|Proteobacteria,2TUDK@28211|Alphaproteobacteria,3JTSX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family	MA20_16020	-	2.6.1.13	ko:K00819	ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130	-	R00667	RC00006,RC00062	ko00000,ko00001,ko01000,ko01007	-	-	-	Aminotran_3
SX1_k127_5941212_4	1297865.APJD01000005_gene3664	1.164e-128	412.0	COG4731@1|root,COG4731@2|Bacteria,1R5BG@1224|Proteobacteria,2TRQI@28211|Alphaproteobacteria,3JY24@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized protein conserved in bacteria (DUF2147)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2147
SX1_k127_5941212_10	323097.Nham_3476	0.000945	43.0	COG5567@1|root,COG5567@2|Bacteria,1NEKY@1224|Proteobacteria,2UHV1@28211|Alphaproteobacteria,3K148@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Prokaryotic lipoprotein-attachment site	-	-	-	-	-	-	-	-	-	-	-	-	LPAM_2
SX1_k127_5941212_8	1297865.APJD01000005_gene3663	5.413e-46	166.0	COG4258@1|root,COG4258@2|Bacteria,1QW57@1224|Proteobacteria,2TSFU@28211|Alphaproteobacteria,3JQM0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	MMPL family	MA20_16030	-	-	ko:K07003	-	-	-	-	ko00000	-	-	-	MMPL
SX1_k127_5950503_9	1297865.APJD01000013_gene1295	6.794e-117	381.0	COG0235@1|root,COG0235@2|Bacteria,1MWP9@1224|Proteobacteria,2TRMV@28211|Alphaproteobacteria,3JUUN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Class II Aldolase and Adducin N-terminal domain	addA	-	-	-	-	-	-	-	-	-	-	-	Aldolase_II
SX1_k127_5950503_2	1297865.APJD01000013_gene1294	0.0	1015.0	COG5476@1|root,COG5476@2|Bacteria,1MX4P@1224|Proteobacteria,2TUFM@28211|Alphaproteobacteria,3JV2T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	MlrC C-terminus	-	-	-	-	-	-	-	-	-	-	-	-	DUF1485,MlrC_C
SX1_k127_5950503_4	1297865.APJD01000013_gene1293	1.083e-222	700.0	COG0625@1|root,COG0625@2|Bacteria,1Q9ND@1224|Proteobacteria,2TT22@28211|Alphaproteobacteria,3JX9Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	GST_C_2,GST_N_3
SX1_k127_5950503_7	1297865.APJD01000013_gene1292	1.939e-137	437.0	COG3917@1|root,COG3917@2|Bacteria,1R3XW@1224|Proteobacteria,2TUW5@28211|Alphaproteobacteria,3JUG8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	DSBA-like thioredoxin domain	-	-	-	-	-	-	-	-	-	-	-	-	DSBA
SX1_k127_5950503_0	1297865.APJD01000013_gene1291	0.0	1354.0	COG2072@1|root,COG2072@2|Bacteria,1MUQH@1224|Proteobacteria,2TRG4@28211|Alphaproteobacteria,3JSMR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Flavin-binding monooxygenase-like	MA20_14940	-	1.14.13.84	ko:K14520	ko00363,ko01100,ko01120,map00363,map01100,map01120	-	R06892	RC01644	ko00000,ko00001,ko01000	-	-	-	FMO-like,K_oxygenase,NAD_binding_8,Pyr_redox_3
SX1_k127_5950503_6	1297865.APJD01000013_gene1290	1.339e-153	501.0	COG1028@1|root,COG1028@2|Bacteria,1R6D6@1224|Proteobacteria,2U672@28211|Alphaproteobacteria,3JS6Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_5950503_8	1297865.APJD01000013_gene1289	2.477e-133	428.0	COG1309@1|root,COG1309@2|Bacteria,1RE97@1224|Proteobacteria,2U8N9@28211|Alphaproteobacteria,3JUHH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	MA20_14935	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_5950503_1	1297865.APJD01000013_gene1288	0.0	1028.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JU50@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	-	-	-	ko:K00666	-	-	-	-	ko00000,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_5950503_3	1297865.APJD01000013_gene1287	2.926e-280	863.0	COG0683@1|root,COG0683@2|Bacteria,1MVZR@1224|Proteobacteria,2TRRP@28211|Alphaproteobacteria,3JTVJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein domain	MA20_14925	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_5950503_5	1297865.APJD01000013_gene1286	5.236e-178	559.0	COG0559@1|root,COG0559@2|Bacteria,1Q7SN@1224|Proteobacteria,2TVPA@28211|Alphaproteobacteria,3JTH7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	MA20_14920	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_5950503_10	1297865.APJD01000013_gene1285	1.197e-100	338.0	COG4177@1|root,COG4177@2|Bacteria,1N5I8@1224|Proteobacteria,2U0PT@28211|Alphaproteobacteria,3JSC7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	MA20_14915	-	-	ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_5953500_5	1297865.APJD01000062_gene3358	6.285e-21	93.0	COG5442@1|root,COG5442@2|Bacteria,1REZ8@1224|Proteobacteria,2U7ES@28211|Alphaproteobacteria,3JYUM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Flagellar protein FlaF	flaF	-	-	ko:K06602	-	-	-	-	ko00000,ko02035	-	-	-	FlaF
SX1_k127_5953500_2	1230476.C207_00799	5.885e-206	647.0	COG1344@1|root,COG1344@2|Bacteria,1MXC4@1224|Proteobacteria,2TRIP@28211|Alphaproteobacteria,3JT0V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella	-	-	-	-	-	-	-	-	-	-	-	-	DUF1522,Flagellin_C,Flagellin_N
SX1_k127_5953500_4	1297865.APJD01000071_gene1236	1.234e-86	287.0	COG5443@1|root,COG5443@2|Bacteria,1RD3V@1224|Proteobacteria,2U7PK@28211|Alphaproteobacteria,3JWU5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Flagellar protein FlbT	flbT	-	-	ko:K06601	-	-	-	-	ko00000,ko02035	-	-	-	FlbT
SX1_k127_5953500_1	1297865.APJD01000071_gene1237	0.0	1137.0	COG1344@1|root,COG1749@1|root,COG1344@2|Bacteria,COG1749@2|Bacteria,1PDE9@1224|Proteobacteria,2TRKN@28211|Alphaproteobacteria,3JT0D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella	-	-	-	-	-	-	-	-	-	-	-	-	Flagellin_C,Flagellin_N
SX1_k127_5953500_0	1297865.APJD01000071_gene1238	0.0	1150.0	COG1256@1|root,COG1256@2|Bacteria,1MV2M@1224|Proteobacteria,2TV1B@28211|Alphaproteobacteria,3JRSV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	Belongs to the flagella basal body rod proteins family	flgK	-	-	ko:K02396	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	Flg_bb_rod,Flg_bbr_C
SX1_k127_5953500_3	1297865.APJD01000071_gene1239	3.112e-113	366.0	COG1749@1|root,COG1749@2|Bacteria,1MU5J@1224|Proteobacteria,2TSF2@28211|Alphaproteobacteria,3JR44@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	N	flagellar basal body	flgE	-	-	ko:K02390	ko02040,map02040	-	-	-	ko00000,ko00001,ko02035	-	-	-	FlaE,Flg_bb_rod,Flg_bbr_C
SX1_k127_5955266_6	1297865.APJD01000036_gene1535	2.115e-183	575.0	COG0439@1|root,COG1984@1|root,COG2049@1|root,COG0439@2|Bacteria,COG1984@2|Bacteria,COG2049@2|Bacteria,1MU4H@1224|Proteobacteria,2TRU5@28211|Alphaproteobacteria,3JXDZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EI	Allophanate hydrolase subunit 2	uca	-	6.3.4.6	ko:K01941	ko00220,ko00791,ko01100,map00220,map00791,map01100	-	R00774	RC00378	ko00000,ko00001,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2,CT_A_B,CT_C_D
SX1_k127_5955266_16	1297865.APJD01000036_gene1534	9.113e-135	436.0	COG3665@1|root,COG3665@2|Bacteria,1N9DM@1224|Proteobacteria,2TU1Z@28211|Alphaproteobacteria,3JUFV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF1989)	-	-	-	ko:K09967	-	-	-	-	ko00000	-	-	-	DUF1989
SX1_k127_5955266_7	1297865.APJD01000036_gene1533	2.531e-177	566.0	COG3665@1|root,COG3665@2|Bacteria,1N2KR@1224|Proteobacteria,2TSBV@28211|Alphaproteobacteria,3JS2Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF1989)	-	-	-	ko:K09967	-	-	-	-	ko00000	-	-	-	DUF1989
SX1_k127_5955266_9	1297865.APJD01000036_gene1532	2.088e-172	548.0	COG1116@1|root,COG1116@2|Bacteria,1MWZG@1224|Proteobacteria,2TT79@28211|Alphaproteobacteria,3JVU4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ABC transporter	-	-	-	ko:K02049	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	ABC_tran
SX1_k127_5955266_11	1297865.APJD01000036_gene1531	7.279e-159	511.0	COG0600@1|root,COG0600@2|Bacteria,1MWDJ@1224|Proteobacteria,2TTR3@28211|Alphaproteobacteria,3JR5N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02050	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	BPD_transp_1
SX1_k127_5955266_2	1230476.C207_04349	1.777e-218	682.0	COG0715@1|root,COG0715@2|Bacteria,1MVJA@1224|Proteobacteria,2TTB8@28211|Alphaproteobacteria,3JTPR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NMT1-like family	-	-	-	ko:K02051	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	NMT1,NMT1_2
SX1_k127_5955266_15	1297865.APJD01000036_gene1529	9.932e-142	451.0	COG0625@1|root,COG0625@2|Bacteria,1N2Z1@1224|Proteobacteria,2U0AX@28211|Alphaproteobacteria,3JQT5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, C-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	GST_C_2,GST_N,GST_N_3
SX1_k127_5955266_12	1297865.APJD01000036_gene1528	1.954e-155	491.0	COG1028@1|root,COG1028@2|Bacteria,1MWJQ@1224|Proteobacteria,2U1AK@28211|Alphaproteobacteria,3JTHH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_5955266_1	1297865.APJD01000036_gene1527	7.345e-257	794.0	COG1804@1|root,COG1804@2|Bacteria,1MVY1@1224|Proteobacteria,2TVJ9@28211|Alphaproteobacteria,3JQZ3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA-transferase family III	-	-	-	-	-	-	-	-	-	-	-	-	CoA_transf_3
SX1_k127_5955266_5	1297865.APJD01000036_gene1526	2.919e-185	580.0	COG2207@1|root,COG2207@2|Bacteria,1RJPK@1224|Proteobacteria,2TV79@28211|Alphaproteobacteria,3K6Q1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	ko:K07506	-	-	-	-	ko00000,ko03000	-	-	-	HTH_18
SX1_k127_5955266_22	189753.AXAS01000008_gene6782	1.872e-06	49.0	COG0582@1|root,COG0582@2|Bacteria,1RB4D@1224|Proteobacteria,2U5HB@28211|Alphaproteobacteria,3K68W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Phage integrase family	-	-	-	-	-	-	-	-	-	-	-	-	Phage_integrase
SX1_k127_5955266_19	172088.AUGA01000001_gene6241	1.694e-69	237.0	COG0745@1|root,COG0745@2|Bacteria,1QUSA@1224|Proteobacteria,2TW5G@28211|Alphaproteobacteria,3JYPM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KT	Response regulator receiver	QU41_05915	-	-	ko:K13589	ko02020,ko04112,map02020,map04112	M00512	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg
SX1_k127_5955266_3	1230476.C207_04353	3.456e-205	639.0	COG3741@1|root,COG3741@2|Bacteria,1MY4D@1224|Proteobacteria,2TUPZ@28211|Alphaproteobacteria,3JRPP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	N-formylglutamate amidohydrolase	MA20_06380	-	3.5.1.68	ko:K01458	ko00340,ko00630,map00340,map00630	-	R00525	RC00165,RC00323	ko00000,ko00001,ko01000	-	-	-	FGase
SX1_k127_5955266_10	1297865.APJD01000036_gene1523	1.473e-167	528.0	COG0483@1|root,COG0483@2|Bacteria,1PPJ0@1224|Proteobacteria,2TQTX@28211|Alphaproteobacteria,3JQMV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Inositol monophosphatase	hisN	-	3.1.3.15,3.1.3.25,3.1.3.93	ko:K01092,ko:K18649	ko00053,ko00340,ko00521,ko00562,ko01100,ko01110,ko01230,ko04070,map00053,map00340,map00521,map00562,map01100,map01110,map01230,map04070	M00026,M00114,M00131	R01185,R01186,R01187,R03013,R07674	RC00017,RC00078	ko00000,ko00001,ko00002,ko01000	-	-	-	Inositol_P
SX1_k127_5955266_4	1297865.APJD01000036_gene1522	1.397e-203	634.0	COG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2TQWK@28211|Alphaproteobacteria,3JVJ7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter family receptor	-	-	-	-	-	-	-	-	-	-	-	-	TctC
SX1_k127_5955266_14	1297865.APJD01000036_gene1521	7.775e-147	466.0	COG0625@1|root,COG0625@2|Bacteria,1RA4M@1224|Proteobacteria,2TV0I@28211|Alphaproteobacteria,3JTZ7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, N-terminal domain	-	-	2.5.1.18	ko:K00799	ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418	-	R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905	RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944	ko00000,ko00001,ko01000,ko02000	1.A.12.2.2,1.A.12.3.2	-	-	GST_C,GST_C_2,GST_N,GST_N_3
SX1_k127_5955266_8	1297865.APJD01000036_gene1520	8.213e-177	556.0	COG0583@1|root,COG0583@2|Bacteria,1N3XX@1224|Proteobacteria,2TS9T@28211|Alphaproteobacteria,3JQPX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	MA20_06395	-	-	ko:K11921	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
SX1_k127_5955266_13	1297865.APJD01000036_gene1519	2.02e-150	477.0	COG0730@1|root,COG0730@2|Bacteria,1MWAN@1224|Proteobacteria,2TS4X@28211|Alphaproteobacteria,3JS3F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	membrane transporter protein	MA20_06400	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
SX1_k127_5955266_17	1297865.APJD01000036_gene1518	1.41e-125	403.0	COG1280@1|root,COG1280@2|Bacteria,1MWA1@1224|Proteobacteria,2U0HE@28211|Alphaproteobacteria,3JUPV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	LysE type translocator	MA20_06410	-	-	-	-	-	-	-	-	-	-	-	LysE
SX1_k127_5955266_0	1297865.APJD01000036_gene1517	0.0	1174.0	COG0457@1|root,COG2114@1|root,COG5616@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,COG5616@2|Bacteria,1MUMZ@1224|Proteobacteria,2TRUI@28211|Alphaproteobacteria,3JUQM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylyl- / guanylyl cyclase, catalytic domain	MA20_06415	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc,TPR_16,TPR_19,TPR_2,TPR_8
SX1_k127_5955266_18	1297865.APJD01000036_gene1516	3.423e-109	353.0	2BSBG@1|root,32MD9@2|Bacteria,1R813@1224|Proteobacteria,2U3H4@28211|Alphaproteobacteria,3JWD4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5956181_12	1297865.APJD01000005_gene3943	1.506e-109	355.0	COG1116@1|root,COG1116@2|Bacteria,1MUDV@1224|Proteobacteria,2TSH9@28211|Alphaproteobacteria,3JQW2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ABC transporter	MA20_34180	-	-	ko:K02049,ko:K15555	ko00920,ko02010,map00920,map02010	M00188,M00436	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.16,3.A.1.17,3.A.1.17.2	-	-	ABC_tran
SX1_k127_5956181_14	1297865.APJD01000005_gene3942	1.311e-70	259.0	COG2331@1|root,COG2331@2|Bacteria,1NABD@1224|Proteobacteria,2UDQN@28211|Alphaproteobacteria,3JZ8D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative regulatory protein	MA20_23040	-	-	-	-	-	-	-	-	-	-	-	Zn-ribbon_8
SX1_k127_5956181_1	1230476.C207_01944	9.025e-283	868.0	COG2421@1|root,COG2421@2|Bacteria,1MVRT@1224|Proteobacteria,2U0J5@28211|Alphaproteobacteria,3JRSW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Acetamidase/Formamidase family	fmdA	-	3.5.1.49	ko:K01455	ko00460,ko00630,ko00910,ko01200,map00460,map00630,map00910,map01200	-	R00524	RC02432,RC02810	ko00000,ko00001,ko01000	-	-	-	FmdA_AmdA
SX1_k127_5956181_9	1297865.APJD01000005_gene3940	2.612e-140	447.0	COG0410@1|root,COG0410@2|Bacteria,1MU4Z@1224|Proteobacteria,2TS23@28211|Alphaproteobacteria,3JSKN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ABC transporter	MA20_23050	-	-	ko:K11963	ko02010,map02010	M00323	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4.4,3.A.1.4.5	-	-	ABC_tran
SX1_k127_5956181_7	1297865.APJD01000005_gene3939	1.762e-161	509.0	COG4674@1|root,COG4674@2|Bacteria,1MUBR@1224|Proteobacteria,2TQVJ@28211|Alphaproteobacteria,3JSTG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	ABC transporter, ATP-binding protein	MA20_23055	-	-	ko:K11962	ko02010,map02010	M00323	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4.4,3.A.1.4.5	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_5956181_3	1297865.APJD01000005_gene3938	7.2e-233	731.0	COG4177@1|root,COG4177@2|Bacteria,1MUPI@1224|Proteobacteria,2TTN2@28211|Alphaproteobacteria,3JUQZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	-	-	-	ko:K11961	ko02010,map02010	M00323	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4.4,3.A.1.4.5	-	-	BPD_transp_2
SX1_k127_5956181_5	1297865.APJD01000005_gene3937	7.127e-189	593.0	COG0559@1|root,COG0559@2|Bacteria,1MVND@1224|Proteobacteria,2TRMA@28211|Alphaproteobacteria,3JQWJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	MA20_23065	-	-	ko:K11960	ko02010,map02010	M00323	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4.4,3.A.1.4.5	-	-	BPD_transp_2
SX1_k127_5956181_2	1230476.C207_01939	2.777e-277	853.0	COG0683@1|root,COG0683@2|Bacteria,1MU8V@1224|Proteobacteria,2TS3I@28211|Alphaproteobacteria,3JRX8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	MA20_23070	-	-	ko:K11959	ko02010,map02010	M00323	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4.4,3.A.1.4.5	-	-	Peripla_BP_5
SX1_k127_5956181_0	1297865.APJD01000005_gene3935	0.0	2226.0	COG0642@1|root,COG0784@1|root,COG1457@1|root,COG0784@2|Bacteria,COG1457@2|Bacteria,COG2205@2|Bacteria,1NRP8@1224|Proteobacteria,2TQWE@28211|Alphaproteobacteria,3JQW8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	His Kinase A (phosphoacceptor) domain	MA20_23075	-	-	ko:K20971	ko02025,map02025	-	-	-	ko00000,ko00001,ko01001,ko02022	-	-	-	HATPase_c,HisKA,PAS_3,Response_reg
SX1_k127_5956181_11	1429916.X566_02915	1.847e-112	370.0	COG2197@1|root,COG2197@2|Bacteria,1MVNV@1224|Proteobacteria,2TTK7@28211|Alphaproteobacteria,3JVF1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	helix_turn_helix, Lux Regulon	MA20_23080	-	-	-	-	-	-	-	-	-	-	-	GerE,Response_reg
SX1_k127_5956181_4	1297865.APJD01000005_gene3933	7.205e-205	638.0	COG2207@1|root,COG2207@2|Bacteria,1PF5X@1224|Proteobacteria,2TWRK@28211|Alphaproteobacteria,3JS75@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Cupin	-	-	-	ko:K18991	-	M00647	-	-	ko00000,ko00002,ko03000	-	-	-	Cupin_6,HTH_18
SX1_k127_5956181_13	398525.KB900701_gene3964	2.828e-80	269.0	COG2128@1|root,COG2128@2|Bacteria,1MUDM@1224|Proteobacteria,2TTY5@28211|Alphaproteobacteria,3JVBY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity	ahpD	-	-	-	-	-	-	-	-	-	-	-	CMD
SX1_k127_5956181_15	1230476.C207_01936	5.867e-31	123.0	2CBGE@1|root,2ZZAR@2|Bacteria,1MZRP@1224|Proteobacteria,2UDHF@28211|Alphaproteobacteria,3K06Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5956181_6	1297865.APJD01000005_gene3930	1.068e-162	515.0	COG2243@1|root,COG2243@2|Bacteria,1MXWZ@1224|Proteobacteria,2TUI6@28211|Alphaproteobacteria,3JS40@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Tetrapyrrole (Corrin/Porphyrin) Methylases	cobF	-	2.1.1.152	ko:K02228	ko00860,ko01100,map00860,map01100	-	R05219	RC00003,RC00923,RC02890	ko00000,ko00001,ko01000	-	-	-	TP_methylase
SX1_k127_5956181_8	1297865.APJD01000005_gene3929	4.807e-142	454.0	COG0007@1|root,COG0007@2|Bacteria,1MUI0@1224|Proteobacteria,2TRJC@28211|Alphaproteobacteria,3JRRB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Tetrapyrrole (Corrin/Porphyrin) Methylases	cobA	-	1.3.1.76,2.1.1.107,4.99.1.4	ko:K02302,ko:K02303	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R02864,R03194,R03947	RC00003,RC00871,RC01012,RC01034	ko00000,ko00001,ko00002,ko01000	-	-	-	CysG_dimeriser,NAD_binding_7,Sirohm_synth_M,TP_methylase
SX1_k127_5956181_10	1297865.APJD01000005_gene3928	2.155e-123	395.0	COG1797@1|root,COG1797@2|Bacteria,1MV7Z@1224|Proteobacteria,2TR0W@28211|Alphaproteobacteria,3JTID@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L-glutamine or ammonia as the nitrogen source	cobB	-	6.3.5.11,6.3.5.9	ko:K02224	ko00860,ko01100,ko01120,map00860,map01100,map01120	-	R05224,R05815	RC00010,RC01301	ko00000,ko00001,ko01000	-	-	-	AAA_26,CbiA,GATase_3
SX1_k127_5964285_3	1297865.APJD01000003_gene6467	1.029e-108	351.0	COG2334@1|root,COG2334@2|Bacteria,1MUKJ@1224|Proteobacteria,2TS6D@28211|Alphaproteobacteria,3JQS5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Belongs to the pseudomonas-type ThrB family	thrB	-	2.7.1.39	ko:K02204	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	M00018	R01771	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000	-	-	-	APH
SX1_k127_5964285_5	1038859.AXAU01000005_gene5176	2.377e-87	295.0	COG0328@1|root,COG0328@2|Bacteria,1RCZ1@1224|Proteobacteria,2U7C4@28211|Alphaproteobacteria,3JTPP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	rnhA	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576	3.1.26.4	ko:K03469	ko03030,map03030	-	-	-	ko00000,ko00001,ko01000,ko03032	-	-	-	RNase_H
SX1_k127_5964285_4	1297865.APJD01000003_gene6469	1.524e-98	325.0	COG0678@1|root,COG0678@2|Bacteria,1MU0H@1224|Proteobacteria,2U6ZN@28211|Alphaproteobacteria,3JU03@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Redoxin	MA20_20905	-	1.11.1.15	ko:K03386	ko04214,map04214	-	-	-	ko00000,ko00001,ko01000,ko04147	-	-	-	Redoxin
SX1_k127_5964285_7	319003.Bra1253DRAFT_06100	2.291e-09	59.0	2ACCG@1|root,311XQ@2|Bacteria,1N2IH@1224|Proteobacteria,2UCXM@28211|Alphaproteobacteria,3K05X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5964285_2	1297865.APJD01000003_gene6470	1.096e-120	391.0	COG3803@1|root,COG3803@2|Bacteria,1RHYI@1224|Proteobacteria,2U7AN@28211|Alphaproteobacteria,3JW9E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bacterial protein of unknown function (DUF924)	-	-	-	-	-	-	-	-	-	-	-	-	DUF924
SX1_k127_5964285_0	1297865.APJD01000003_gene6471	0.0	1133.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JR0N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	fadD	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
SX1_k127_5964285_1	1297865.APJD01000003_gene6472	6.197e-278	860.0	COG1686@1|root,COG1686@2|Bacteria,1MUU7@1224|Proteobacteria,2TT24@28211|Alphaproteobacteria,3JS1K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the peptidase S11 family	dacA3	-	3.4.16.4	ko:K01286	-	-	-	-	ko00000,ko01000	-	-	-	Peptidase_S11
SX1_k127_5964285_6	1297865.APJD01000003_gene6473	5.855e-66	226.0	COG1132@1|root,COG1132@2|Bacteria,1MUBM@1224|Proteobacteria,2TSR1@28211|Alphaproteobacteria,3JSZB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Involved in beta-(1-- 2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP- binding domain (NBD) is responsible for energy generation	ndvA	GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
SX1_k127_5971175_4	1297865.APJD01000007_gene2267	5.349e-156	493.0	COG1802@1|root,COG1802@2|Bacteria,1R96W@1224|Proteobacteria,2TV1N@28211|Alphaproteobacteria,3JUWV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FCD	MA20_26680	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SX1_k127_5971175_6	1297865.APJD01000007_gene2266	1.964e-89	295.0	COG3631@1|root,COG3631@2|Bacteria,1RAKK@1224|Proteobacteria,2UADV@28211|Alphaproteobacteria,3JY6Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Ketosteroid isomerase-related protein	MA20_26675	-	-	-	-	-	-	-	-	-	-	-	SnoaL_2
SX1_k127_5971175_1	1297865.APJD01000007_gene2265	5.06e-275	846.0	COG0402@1|root,COG0402@2|Bacteria,1MX34@1224|Proteobacteria,2U0IN@28211|Alphaproteobacteria,3JRTY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Amidohydrolase family	-	-	3.5.4.1	ko:K01485	ko00240,ko00330,ko01100,map00240,map00330,map01100	-	R00974,R01411,R02922	RC00074,RC00514,RC00809	ko00000,ko00001,ko01000	-	-	-	Amidohydro_1,Amidohydro_3
SX1_k127_5971175_0	1297865.APJD01000007_gene2264	3.764e-280	860.0	COG4948@1|root,COG4948@2|Bacteria,1MURK@1224|Proteobacteria,2U10C@28211|Alphaproteobacteria,3JR02@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	MR_MLE_C,MR_MLE_N
SX1_k127_5971175_2	1297865.APJD01000007_gene2263	2.647e-256	792.0	COG0683@1|root,COG0683@2|Bacteria,1R44H@1224|Proteobacteria,2U0EQ@28211|Alphaproteobacteria,3JRNC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_5971175_3	1297865.APJD01000007_gene2262	1.273e-173	545.0	COG0145@1|root,COG0145@2|Bacteria,1MU2Y@1224|Proteobacteria,2TQZ6@28211|Alphaproteobacteria,3JSA9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EQ	Hydantoinase/oxoprolinase	-	-	3.5.2.14	ko:K01473	ko00330,ko01100,map00330,map01100	-	R03187	RC00632	ko00000,ko00001,ko01000	-	-	-	Hydant_A_N,Hydantoinase_A
SX1_k127_5971175_5	1429916.X566_14810	1.023e-91	306.0	COG0715@1|root,COG0715@2|Bacteria,1MW0S@1224|Proteobacteria,2TV7D@28211|Alphaproteobacteria,3JRYU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NMT1-like family	-	-	-	ko:K02051	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	NMT1,NMT1_2
SX1_k127_5972451_0	1297865.APJD01000020_gene239	0.0	1048.0	COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TQS3@28211|Alphaproteobacteria,3JRAF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Putative diguanylate phosphodiesterase	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,MHYT,PAS_7,PAS_8,dCache_1
SX1_k127_5972451_1	1297865.APJD01000020_gene238	4.446e-293	900.0	COG0793@1|root,COG0793@2|Bacteria,1MU39@1224|Proteobacteria,2TRW2@28211|Alphaproteobacteria,3JVC7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	tail specific protease	ctpA	-	3.4.21.102	ko:K03797	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	PDZ_2,Peptidase_S41
SX1_k127_5972451_2	1297865.APJD01000020_gene237	2.454e-267	824.0	COG1902@1|root,COG1902@2|Bacteria,1MVE0@1224|Proteobacteria,2TQPY@28211|Alphaproteobacteria,3JW42@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NADH:flavin oxidoreductase / NADH oxidase family	-	-	-	-	-	-	-	-	-	-	-	-	Oxidored_FMN
SX1_k127_5972451_4	1297865.APJD01000020_gene236	7.279e-117	378.0	COG1611@1|root,COG1611@2|Bacteria,1RD59@1224|Proteobacteria,2U5DP@28211|Alphaproteobacteria,3JW4A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Possible lysine decarboxylase	-	-	3.2.2.10	ko:K06966	ko00230,ko00240,map00230,map00240	-	R00182,R00510	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	Lysine_decarbox
SX1_k127_5972451_8	318996.AXAZ01000086_gene748	2.289e-21	102.0	2DI61@1|root,3024G@2|Bacteria,1P3IZ@1224|Proteobacteria,2UVE0@28211|Alphaproteobacteria,3K4V6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5972451_7	1297865.APJD01000020_gene234	5.665e-90	297.0	COG2227@1|root,COG2227@2|Bacteria	2|Bacteria	H	3-demethylubiquinone-9 3-O-methyltransferase activity	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_23,Methyltransf_25
SX1_k127_5972451_3	1297865.APJD01000020_gene233	1.528e-131	422.0	COG0637@1|root,COG0637@2|Bacteria,1NF90@1224|Proteobacteria,2U9G8@28211|Alphaproteobacteria,3JVHQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Haloacid dehalogenase-like hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	HAD_2
SX1_k127_5972451_5	1297865.APJD01000020_gene232	3.579e-92	305.0	COG0454@1|root,COG0456@2|Bacteria,1RKG2@1224|Proteobacteria,2U92Z@28211|Alphaproteobacteria,3JZAT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
SX1_k127_5972451_6	1245469.S58_08070	6.348e-91	305.0	COG0346@1|root,COG0346@2|Bacteria,1RD81@1224|Proteobacteria,2U7VR@28211|Alphaproteobacteria,3JXQ1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glyoxalase-like domain	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase_3
SX1_k127_5975739_3	1297865.APJD01000006_gene4512	3.587e-196	617.0	COG1566@1|root,COG1566@2|Bacteria,1MXZV@1224|Proteobacteria,2TWQ4@28211|Alphaproteobacteria,3JTD1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Biotin-lipoyl like	-	-	-	ko:K01993	-	-	-	-	ko00000	-	-	-	HlyD_D23
SX1_k127_5975739_0	1297865.APJD01000006_gene4511	0.0	1470.0	COG0842@1|root,COG1668@1|root,COG0842@2|Bacteria,COG1668@2|Bacteria,1R4QG@1224|Proteobacteria,2TRYM@28211|Alphaproteobacteria,3JWVH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CPV	ABC-2 family transporter protein	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_3
SX1_k127_5975739_4	1380355.JNIJ01000023_gene2360	1.26e-136	446.0	COG1566@1|root,COG1566@2|Bacteria,1QW6P@1224|Proteobacteria,2TQX0@28211|Alphaproteobacteria,3JVPB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Biotin-lipoyl like	-	-	-	ko:K01993	-	-	-	-	ko00000	-	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
SX1_k127_5975739_1	1297865.APJD01000006_gene4509	1.528e-298	919.0	COG0584@1|root,COG0584@2|Bacteria,1MVWZ@1224|Proteobacteria,2TV4M@28211|Alphaproteobacteria,3JWR8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Glycerophosphoryl diester phosphodiesterase family	-	-	3.1.4.46	ko:K01126	ko00564,map00564	-	R01030,R01470	RC00017,RC00425	ko00000,ko00001,ko01000	-	-	-	GDPD
SX1_k127_5975739_2	1297865.APJD01000006_gene4508	1.165e-215	670.0	COG0031@1|root,COG0031@2|Bacteria,1MUBE@1224|Proteobacteria,2TR4W@28211|Alphaproteobacteria,3JRM9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Pyridoxal-phosphate dependent enzyme	cysB	-	2.5.1.47	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	M00021	R00897,R03601,R04859	RC00020,RC02814,RC02821	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
SX1_k127_5975739_5	1297865.APJD01000006_gene4507	8.469e-99	323.0	COG1873@1|root,COG1873@2|Bacteria,1N6X0@1224|Proteobacteria,2UFAR@28211|Alphaproteobacteria,3JVXX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PRC-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	PRC
SX1_k127_5975739_6	1297865.APJD01000006_gene4506	3.134e-75	252.0	COG3861@1|root,COG3861@2|Bacteria,1MZM2@1224|Proteobacteria,2UBTQ@28211|Alphaproteobacteria,3JYSS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PRC-barrel domain	-	-	-	-	-	-	-	-	-	-	-	-	PRC
SX1_k127_5976092_14	1230476.C207_04734	3.749e-90	301.0	2CA82@1|root,312BV@2|Bacteria,1N3CZ@1224|Proteobacteria,2UEEF@28211|Alphaproteobacteria,3K0QV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5976092_0	1297865.APJD01000019_gene3230	0.0	1024.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JT7T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	MA20_43560	-	-	ko:K18661	ko00280,map00280	-	R03383	RC00004,RC00137	ko00000,ko00001,ko01000	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_5976092_9	1230476.C207_04732	1.413e-163	518.0	COG4221@1|root,COG4221@2|Bacteria,1MUF8@1224|Proteobacteria,2TTNG@28211|Alphaproteobacteria,3JQP5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	KR domain	MA20_43565	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_5976092_1	1297865.APJD01000019_gene3232	2.011e-310	951.0	COG0477@1|root,COG2814@2|Bacteria,1MWKH@1224|Proteobacteria,2U23N@28211|Alphaproteobacteria,3JU4X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_5976092_13	1297865.APJD01000019_gene3233	4.542e-104	340.0	COG2335@1|root,COG2335@2|Bacteria,1RD06@1224|Proteobacteria,2U7H5@28211|Alphaproteobacteria,3JU54@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.	MA20_43570	-	-	-	-	-	-	-	-	-	-	-	Fasciclin
SX1_k127_5976092_11	1297865.APJD01000019_gene3234	1.6e-130	417.0	COG4117@1|root,COG4117@2|Bacteria,1MX97@1224|Proteobacteria,2U0ZF@28211|Alphaproteobacteria,3JSZD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Prokaryotic cytochrome b561	MA20_43575	-	-	-	-	-	-	-	-	-	-	-	Ni_hydr_CYTB
SX1_k127_5976092_6	1297865.APJD01000019_gene3235	1.045e-175	550.0	COG2041@1|root,COG2041@2|Bacteria,1MUW0@1224|Proteobacteria,2TS40@28211|Alphaproteobacteria,3JSIU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Oxidoreductase molybdopterin binding	MA20_43580	-	-	-	-	-	-	-	-	-	-	-	Oxidored_molyb,TAT_signal
SX1_k127_5976092_2	1297865.APJD01000019_gene3236	1.585e-240	745.0	COG0477@1|root,COG2814@2|Bacteria,1MW6T@1224|Proteobacteria,2U1KC@28211|Alphaproteobacteria,3JS4N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Uncharacterised MFS-type transporter YbfB	MA20_43585	-	-	-	-	-	-	-	-	-	-	-	MFS_4
SX1_k127_5976092_8	1297865.APJD01000019_gene3237	4.307e-171	539.0	COG0697@1|root,COG0697@2|Bacteria,1R6SK@1224|Proteobacteria,2U4IR@28211|Alphaproteobacteria,3JWNZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EG	EamA-like transporter family	-	-	-	-	-	-	-	-	-	-	-	-	EamA
SX1_k127_5976092_3	1297865.APJD01000019_gene3238	5.48e-234	727.0	COG0473@1|root,COG0473@2|Bacteria,1MUH4@1224|Proteobacteria,2TQKG@28211|Alphaproteobacteria,3JRCP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CE	Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate	leuB	GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.1.1.85	ko:K00052	ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230	M00432,M00535	R00994,R04426,R10052	RC00084,RC00417,RC03036	br01601,ko00000,ko00001,ko00002,ko01000	-	-	-	Iso_dh
SX1_k127_5976092_15	1297865.APJD01000019_gene3239	5.639e-82	274.0	2A8WA@1|root,30XZN@2|Bacteria,1RHG7@1224|Proteobacteria,2U9J4@28211|Alphaproteobacteria,3JYW8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5976092_7	1297865.APJD01000019_gene3240	3.446e-171	537.0	2BIMX@1|root,32CUX@2|Bacteria,1QKNA@1224|Proteobacteria,2U0TA@28211|Alphaproteobacteria,3JX4T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_5976092_4	1297865.APJD01000019_gene3241	1.147e-224	696.0	COG0136@1|root,COG0136@2|Bacteria,1MUHG@1224|Proteobacteria,2TSRD@28211|Alphaproteobacteria,3JTS8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate	asd	-	1.2.1.11	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R02291	RC00684	ko00000,ko00001,ko00002,ko01000	-	-	-	Semialdhyde_dh,Semialdhyde_dhC
SX1_k127_5976092_12	1297865.APJD01000019_gene3242	1.267e-115	376.0	COG2862@1|root,COG2862@2|Bacteria,1RANN@1224|Proteobacteria,2TSEF@28211|Alphaproteobacteria,3JTEN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized protein family, UPF0114	yqhA	-	-	-	-	-	-	-	-	-	-	-	UPF0114
SX1_k127_5976092_10	1297865.APJD01000019_gene3243	5.165e-140	445.0	COG0288@1|root,COG0288@2|Bacteria,1NGFN@1224|Proteobacteria,2TRPD@28211|Alphaproteobacteria,3JRJM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Reversible hydration of carbon dioxide	cynT	-	4.2.1.1	ko:K01673	ko00910,map00910	-	R00132,R10092	RC02807	ko00000,ko00001,ko01000	-	-	-	Pro_CA
SX1_k127_5976092_5	1297865.APJD01000019_gene3244	4.692e-185	580.0	COG2301@1|root,COG2301@2|Bacteria,1MW0A@1224|Proteobacteria,2TTC0@28211|Alphaproteobacteria,3JR0H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Belongs to the HpcH HpaI aldolase family	citE	-	3.1.2.30,4.1.3.34	ko:K01644,ko:K14451	ko00630,ko01120,ko01200,ko02020,map00630,map01120,map01200,map02020	M00373	R00362,R10612	RC00004,RC00014,RC00067,RC01118	ko00000,ko00001,ko00002,ko01000	-	-	-	HpcH_HpaI
SX1_k127_5976092_16	224911.27351008	0.000539	43.0	COG2015@1|root,COG2015@2|Bacteria,1MU82@1224|Proteobacteria,2TSM1@28211|Alphaproteobacteria,3JSM0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Alkyl sulfatase dimerisation	MA20_17395	-	-	-	-	-	-	-	-	-	-	-	Alkyl_sulf_C,Alkyl_sulf_dimr,Lactamase_B
SX1_k127_5977703_0	1297865.APJD01000014_gene725	3.542e-308	951.0	COG3696@1|root,COG3696@2|Bacteria,1NUIV@1224|Proteobacteria,2TRWM@28211|Alphaproteobacteria,3JRJE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K15726	-	-	-	-	ko00000,ko02000	2.A.6.1.2	-	-	ACR_tran
SX1_k127_5977703_1	1297865.APJD01000014_gene726	8.016e-251	777.0	COG0845@1|root,COG0845@2|Bacteria,1QNEF@1224|Proteobacteria,2VF10@28211|Alphaproteobacteria,3K3JB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Biotin-lipoyl like	-	-	-	ko:K15727	-	-	-	-	ko00000,ko02000	8.A.1.2.1	-	-	HlyD_D23
SX1_k127_5983758_0	1297865.APJD01000035_gene5459	1.735e-214	668.0	COG0477@1|root,COG0477@2|Bacteria,1MWB4@1224|Proteobacteria,2TWQF@28211|Alphaproteobacteria,3JRCQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_5983758_1	1297865.APJD01000035_gene5458	5.053e-72	243.0	COG2141@1|root,COG2141@2|Bacteria,1NKS6@1224|Proteobacteria,2TT87@28211|Alphaproteobacteria,3JRJ6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Luciferase-like monooxygenase	MA20_23445	-	1.14.13.107	ko:K14733	ko00903,map00903	-	R06398,R09385,R09389,R09393	RC01506	ko00000,ko00001,ko01000	-	-	-	Bac_luciferase
SX1_k127_6000917_2	1297865.APJD01000047_gene4816	2.866e-94	310.0	COG2271@1|root,COG2271@2|Bacteria,1MVPS@1224|Proteobacteria,2TTHW@28211|Alphaproteobacteria,3K2J8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_6000917_1	1297865.APJD01000047_gene4817	4.662e-206	645.0	COG3555@1|root,COG3555@2|Bacteria,1MW3M@1224|Proteobacteria,2TRVQ@28211|Alphaproteobacteria,3JUKX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Aspartyl/Asparaginyl beta-hydroxylase	MA20_07860	-	1.14.11.16	ko:K00476,ko:K12979	-	-	-	-	ko00000,ko01000,ko01005	-	-	-	Asp_Arg_Hydrox
SX1_k127_6000917_0	1297865.APJD01000047_gene4818	6.745e-256	790.0	COG0683@1|root,COG0683@2|Bacteria,1MUCB@1224|Proteobacteria,2TRWV@28211|Alphaproteobacteria,3JT98@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein domain	MA20_00695	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_6000917_3	1297865.APJD01000047_gene4819	9.31e-15	74.0	COG1053@1|root,COG1053@2|Bacteria,1MURY@1224|Proteobacteria,2TSRQ@28211|Alphaproteobacteria,3JS1F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	FAD binding domain	MA20_00690	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_2
SX1_k127_6025353_3	1297865.APJD01000002_gene4118	5.397e-223	692.0	COG0265@1|root,COG0265@2|Bacteria,1MU63@1224|Proteobacteria,2TS6B@28211|Alphaproteobacteria,3JRU8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the peptidase S1C family	htrA2	GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006508,GO:0006515,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0009987,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030163,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051603,GO:0061077,GO:0070011,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564,GO:1901565,GO:1901575	3.4.21.107	ko:K04771	ko01503,ko02020,map01503,map02020	M00728	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko03110	-	-	-	PDZ_2,Trypsin_2
SX1_k127_6025353_0	1297865.APJD01000002_gene4119	1.246e-287	884.0	COG2256@1|root,COG2256@2|Bacteria,1MUVS@1224|Proteobacteria,2TQVF@28211|Alphaproteobacteria,3JSFI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	AAA C-terminal domain	rarA	GO:0005575,GO:0005622,GO:0005623,GO:0005657,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0030894,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901576	-	ko:K07478	-	-	-	-	ko00000	-	-	-	AAA,AAA_assoc_2,MgsA_C,RuvB_N
SX1_k127_6025353_1	1297865.APJD01000002_gene4120	6.8e-269	835.0	COG0564@1|root,COG0564@2|Bacteria,1MVDX@1224|Proteobacteria,2TTQC@28211|Alphaproteobacteria,3JQTW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Responsible for synthesis of pseudouridine from uracil	rluC	GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360	5.4.99.24	ko:K06179	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2,S4
SX1_k127_6025353_2	1297865.APJD01000002_gene4121	2.567e-263	812.0	COG1228@1|root,COG1228@2|Bacteria,1PIDC@1224|Proteobacteria,2U3HP@28211|Alphaproteobacteria,3JRPS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Amidohydrolase family	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_1
SX1_k127_6025353_5	1230476.C207_01582	9.088e-35	135.0	29EIZ@1|root,301GZ@2|Bacteria,1N7WG@1224|Proteobacteria,2UH07@28211|Alphaproteobacteria,3K1GG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_6025353_4	1297865.APJD01000002_gene4124	8.97e-211	655.0	COG2159@1|root,COG2159@2|Bacteria,1MXI7@1224|Proteobacteria,2U15G@28211|Alphaproteobacteria,3JVRP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Amidohydrolase	-	-	4.1.1.46	ko:K07045,ko:K14333,ko:K15063	ko00362,ko00627,ko01120,map00362,map00627,map01120	-	R00821,R09278	RC00390	ko00000,ko00001,ko01000	-	-	-	Amidohydro_2
SX1_k127_6037855_2	1297865.APJD01000007_gene2274	1.809e-87	301.0	COG4608@1|root,COG4608@2|Bacteria,1NU4K@1224|Proteobacteria,2TQTV@28211|Alphaproteobacteria,3JW8P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Oligopeptide/dipeptide transporter, C-terminal region	-	-	-	ko:K02032	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
SX1_k127_6037855_1	1297865.APJD01000007_gene2273	3.109e-232	719.0	COG0444@1|root,COG0444@2|Bacteria,1R4KB@1224|Proteobacteria,2TR0J@28211|Alphaproteobacteria,3JSG0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Belongs to the ABC transporter superfamily	-	-	-	ko:K02031	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
SX1_k127_6037855_0	1297865.APJD01000007_gene2272	3.841e-278	858.0	COG1804@1|root,COG1804@2|Bacteria,1NSWZ@1224|Proteobacteria,2U2UE@28211|Alphaproteobacteria,3JWDN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA-transferase family III	-	-	-	-	-	-	-	-	-	-	-	-	CoA_transf_3
SX1_k127_6046714_0	420324.KI911977_gene3231	1.986e-295	912.0	COG2801@1|root,COG2801@2|Bacteria,1MXCK@1224|Proteobacteria,2TTWU@28211|Alphaproteobacteria,1JVCP@119045|Methylobacteriaceae	28211|Alphaproteobacteria	L	Mu transposase, C-terminal	-	-	-	ko:K07497	-	-	-	-	ko00000	-	-	-	Mu-transpos_C,rve
SX1_k127_6046714_2	420324.KI911977_gene3230	2.254e-148	478.0	COG0464@1|root,COG0464@2|Bacteria,1QWUW@1224|Proteobacteria,2TX64@28211|Alphaproteobacteria	28211|Alphaproteobacteria	O	Bacterial TniB protein	-	-	-	-	-	-	-	-	-	-	-	-	TniB
SX1_k127_6046714_4	420324.KI911977_gene3229	1.937e-109	368.0	2DKIW@1|root,309MK@2|Bacteria,1RF7C@1224|Proteobacteria,2U6ID@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	TniQ	-	-	-	-	-	-	-	-	-	-	-	-	TniQ
SX1_k127_6046714_6	266835.14025931	8.009e-100	327.0	2ARAQ@1|root,31GKN@2|Bacteria,1RK39@1224|Proteobacteria,2UMSC@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_6046714_5	883078.HMPREF9695_04953	1.764e-105	346.0	COG1386@1|root,COG1386@2|Bacteria,1N0KD@1224|Proteobacteria,2TRI0@28211|Alphaproteobacteria,3JU7M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Segregation and condensation complex subunit ScpB	-	-	-	-	-	-	-	-	-	-	-	-	SMC_ScpB
SX1_k127_6046714_3	883078.HMPREF9695_04952	1.173e-114	377.0	28IP1@1|root,2Z8P4@2|Bacteria,1NUJ9@1224|Proteobacteria,2TV2R@28211|Alphaproteobacteria,3JURD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1403)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1403
SX1_k127_6046714_1	266779.Meso_4548	2.445e-190	602.0	COG0582@1|root,COG0582@2|Bacteria,1MWGG@1224|Proteobacteria,2TRBJ@28211|Alphaproteobacteria,43HPT@69277|Phyllobacteriaceae	28211|Alphaproteobacteria	L	Belongs to the 'phage' integrase family	-	-	-	-	-	-	-	-	-	-	-	-	Phage_int_SAM_1,Phage_integrase
SX1_k127_6046714_7	1230476.C207_04633	3.096e-09	59.0	28IIA@1|root,2Z8JD@2|Bacteria,1R3RS@1224|Proteobacteria,2U09X@28211|Alphaproteobacteria,3JXAJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	HTH DNA binding domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF1612,HTH_13
SX1_k127_6076928_1	1297865.APJD01000005_gene3797	1.048e-110	359.0	COG1004@1|root,COG1004@2|Bacteria,1MW5U@1224|Proteobacteria,2TREV@28211|Alphaproteobacteria,3JTIE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Belongs to the UDP-glucose GDP-mannose dehydrogenase family	rkpK	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	1.1.1.22	ko:K00012	ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100	M00014,M00129,M00361,M00362	R00286	RC00291	ko00000,ko00001,ko00002,ko01000	-	-	-	UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N
SX1_k127_6076928_0	1297865.APJD01000005_gene3798	7.232e-228	707.0	COG1216@1|root,COG1216@2|Bacteria,1MX5Z@1224|Proteobacteria,2U0IP@28211|Alphaproteobacteria,3JVJ0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Glycosyl transferase family 2	-	-	-	ko:K20444	-	-	-	-	ko00000,ko01000,ko01005,ko02000	4.D.1.3	GT2,GT4	-	Glyco_tranf_2_3,Glycos_transf_2
SX1_k127_608449_5	1297865.APJD01000019_gene3145	5.678e-106	345.0	COG3118@1|root,COG3118@2|Bacteria,1MV0R@1224|Proteobacteria,2TS5X@28211|Alphaproteobacteria,3JRJ9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Tetratricopeptide repeat	trxA2	-	-	ko:K03671,ko:K05838	ko04621,ko05418,map04621,map05418	-	-	-	ko00000,ko00001,ko03110	-	-	-	TPR_19,TPR_20,Thioredoxin
SX1_k127_608449_7	1397696.KK211189_gene2556	3.599e-06	55.0	2DR03@1|root,339MB@2|Bacteria,1VK6Y@1239|Firmicutes,4HR34@91061|Bacilli	91061|Bacilli	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_608449_3	1297865.APJD01000019_gene3146	1.648e-127	409.0	2CKRE@1|root,30UM7@2|Bacteria,1R3YV@1224|Proteobacteria,2U0N9@28211|Alphaproteobacteria,3JW37@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2865)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2865
SX1_k127_608449_0	1297865.APJD01000019_gene3147	5.575e-294	901.0	COG2133@1|root,COG2133@2|Bacteria,1MVK5@1224|Proteobacteria,2TRN9@28211|Alphaproteobacteria,3JTUJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Glucose / Sorbosone dehydrogenase	MA20_25025	-	-	-	-	-	-	-	-	-	-	-	GSDH,PBP
SX1_k127_608449_4	1297865.APJD01000019_gene3148	7.636e-119	382.0	COG2863@1|root,COG2863@2|Bacteria,1N7W9@1224|Proteobacteria,2TSFV@28211|Alphaproteobacteria,3JRR1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome c	-	-	-	ko:K17230	ko00920,ko01120,map00920,map01120	-	R09499	-	ko00000,ko00001	-	-	-	Cytochrom_C,Cytochrome_CBB3
SX1_k127_608449_1	1297865.APJD01000019_gene3149	1.869e-193	605.0	COG1893@1|root,COG1893@2|Bacteria,1MX5M@1224|Proteobacteria,2TVRD@28211|Alphaproteobacteria,3JTNN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid	MA20_25035	-	1.1.1.169	ko:K00077	ko00770,ko01100,ko01110,map00770,map01100,map01110	M00119	R02472	RC00726	ko00000,ko00001,ko00002,ko01000	-	-	-	ApbA,ApbA_C
SX1_k127_608449_2	1297865.APJD01000019_gene3150	4.196e-128	411.0	COG3917@1|root,COG3917@2|Bacteria,1RA6I@1224|Proteobacteria,2U5JB@28211|Alphaproteobacteria,3JRJN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	DSBA-like thioredoxin domain	MA20_25040	-	5.99.1.4	ko:K14584	ko00626,ko01100,ko01120,ko01220,map00626,map01100,map01120,map01220	M00534	R05137	RC03084	br01602,ko00000,ko00001,ko00002,ko01000	-	-	-	DSBA
SX1_k127_608449_6	1297865.APJD01000019_gene3151	7.358e-36	136.0	COG0534@1|root,COG0534@2|Bacteria,1MVRV@1224|Proteobacteria,2U34G@28211|Alphaproteobacteria,3JVWK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	MatE	-	-	-	-	-	-	-	-	-	-	-	-	MatE
SX1_k127_6087496_2	1297865.APJD01000011_gene6733	1.076e-190	598.0	COG4976@1|root,COG4976@2|Bacteria,1RAIT@1224|Proteobacteria,2U5NY@28211|Alphaproteobacteria,3JQXQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Methyltransferase domain	MA20_22060	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_23,Methyltransf_25,TPR_16,TPR_19,TPR_2,TPR_8
SX1_k127_6087496_1	1297865.APJD01000011_gene6732	3.616e-235	728.0	COG1236@1|root,COG1236@2|Bacteria,1MV7U@1224|Proteobacteria,2TQU5@28211|Alphaproteobacteria,3JR3B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Metallo-beta-lactamase superfamily	MA20_22065	-	-	ko:K07577	-	-	-	-	ko00000	-	-	-	Lactamase_B
SX1_k127_6087496_0	1297865.APJD01000011_gene6731	0.0	1042.0	COG1793@1|root,COG1793@2|Bacteria,1MV3S@1224|Proteobacteria,2TRQ9@28211|Alphaproteobacteria,3JRIV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	DNA ligase	lig	-	6.5.1.1,6.5.1.6,6.5.1.7	ko:K10747	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430	-	R00381,R00382,R10822,R10823	RC00005	ko00000,ko00001,ko01000,ko03032,ko03400	-	-	-	DNA_ligase_A_C,DNA_ligase_A_M,DNA_ligase_A_N
SX1_k127_609877_1	1304878.AUGD01000013_gene2914	1.522e-172	544.0	COG2114@1|root,COG2114@2|Bacteria,1MWHK@1224|Proteobacteria,2TR2J@28211|Alphaproteobacteria,3JQWW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_cyc
SX1_k127_609877_0	1297865.APJD01000014_gene747	3.378e-264	817.0	COG0038@1|root,COG0038@2|Bacteria,1MV4K@1224|Proteobacteria,2TT6V@28211|Alphaproteobacteria,3JX9K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Voltage gated chloride channel	-	-	-	ko:K03281	-	-	-	-	ko00000	2.A.49	-	-	Voltage_CLC
SX1_k127_609877_2	1230476.C207_01710	3.103e-72	244.0	COG1051@1|root,COG1051@2|Bacteria,1RE3N@1224|Proteobacteria,2U8EW@28211|Alphaproteobacteria,3JZ5H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	NUDIX domain	MA20_41050	-	-	-	-	-	-	-	-	-	-	-	NUDIX
SX1_k127_6106897_0	1297865.APJD01000011_gene6541	0.0	1195.0	COG3637@1|root,COG3659@1|root,COG3637@2|Bacteria,COG3659@2|Bacteria,1Q8C7@1224|Proteobacteria,2TU66@28211|Alphaproteobacteria,3JRBM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Carbohydrate-selective porin, OprB family	-	-	-	ko:K16080	-	-	-	-	ko00000,ko02000	1.B.4.2.2	-	-	OMP_b-brl,OprB
SX1_k127_6106897_8	1297865.APJD01000011_gene6542	6.524e-39	157.0	2BP9T@1|root,32I1M@2|Bacteria,1P0WW@1224|Proteobacteria,2UU0C@28211|Alphaproteobacteria,3K4RI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_6106897_1	1297865.APJD01000011_gene6543	0.0	1080.0	COG1914@1|root,COG1914@2|Bacteria,1N0XH@1224|Proteobacteria,2VG5I@28211|Alphaproteobacteria,3JU6A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Evidence Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	Nramp
SX1_k127_6106897_4	1297865.APJD01000011_gene6545	7.041e-86	286.0	COG0140@1|root,COG0140@2|Bacteria,1N4JQ@1224|Proteobacteria,2UE16@28211|Alphaproteobacteria,3K0G1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Phosphoribosyl-ATP pyrophosphohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	PRA-PH
SX1_k127_6106897_7	1230476.C207_05917	2.657e-44	162.0	2AQN2@1|root,31FVA@2|Bacteria,1P8CJ@1224|Proteobacteria,2UWR6@28211|Alphaproteobacteria,3K5R7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_6106897_6	1297865.APJD01000011_gene6546	1.101e-50	180.0	COG1937@1|root,COG1937@2|Bacteria,1N1ES@1224|Proteobacteria,2UCP2@28211|Alphaproteobacteria,3JZQ3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metal-sensitive transcriptional repressor	-	-	-	ko:K07807	-	-	-	-	ko00000	-	-	-	Trns_repr_metal
SX1_k127_6106897_5	1297865.APJD01000011_gene6547	4.977e-52	186.0	296A2@1|root,2ZTK1@2|Bacteria,1RJF0@1224|Proteobacteria,2UCIA@28211|Alphaproteobacteria,3K0K1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_40320	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_6106897_3	1297865.APJD01000011_gene6548	3.149e-176	552.0	COG1402@1|root,COG1402@2|Bacteria,1MXR9@1224|Proteobacteria,2TUFR@28211|Alphaproteobacteria,3JQU5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Creatinine amidohydrolase	-	-	3.5.2.10	ko:K01470	ko00330,map00330	-	R01884	RC00615	ko00000,ko00001,ko01000	-	-	-	Creatininase
SX1_k127_6106897_2	1297865.APJD01000011_gene6549	1.009e-222	693.0	COG0715@1|root,COG0715@2|Bacteria,1MXA3@1224|Proteobacteria,2TTW8@28211|Alphaproteobacteria,3JR3I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NMT1/THI5 like	MA20_40330	-	-	ko:K02051	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	NMT1
SX1_k127_6114319_0	1230476.C207_03019	1.444e-151	480.0	COG0378@1|root,COG0378@2|Bacteria,1MVBD@1224|Proteobacteria,2TQMU@28211|Alphaproteobacteria,3JSA5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KO	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG	ureG	-	-	ko:K03189	-	-	-	-	ko00000	-	-	-	cobW
SX1_k127_6114319_1	1297865.APJD01000011_gene6826	1.44e-148	475.0	COG0830@1|root,COG0830@2|Bacteria,1MW8Q@1224|Proteobacteria,2TRVW@28211|Alphaproteobacteria,3JSYT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Required for maturation of urease via the functional incorporation of the urease nickel metallocenter	ureF	-	-	ko:K03188	-	-	-	-	ko00000	-	-	-	UreF
SX1_k127_6114319_2	652103.Rpdx1_1691	2.543e-79	269.0	COG2371@1|root,COG2371@2|Bacteria,1MZQZ@1224|Proteobacteria,2TVBW@28211|Alphaproteobacteria,3JRXK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly	ureE	-	-	ko:K03187	-	-	-	-	ko00000	-	-	-	UreE_C,UreE_N
SX1_k127_6114319_3	1297865.APJD01000011_gene6824	1.453e-62	215.0	COG1359@1|root,COG1359@2|Bacteria,1NGPW@1224|Proteobacteria,2VGJ5@28211|Alphaproteobacteria,3K6BC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Antibiotic biosynthesis monooxygenase	-	-	-	-	-	-	-	-	-	-	-	-	ABM
SX1_k127_6114319_4	1297865.APJD01000011_gene6823	3.982e-58	203.0	COG1359@1|root,COG1359@2|Bacteria,1NGPW@1224|Proteobacteria,2U9QJ@28211|Alphaproteobacteria,3JZIW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Antibiotic biosynthesis monooxygenase	MA20_18330	-	-	-	-	-	-	-	-	-	-	-	ABM
SX1_k127_6114319_5	1297865.APJD01000011_gene6822	1.078e-14	73.0	COG0804@1|root,COG0804@2|Bacteria,1MU5P@1224|Proteobacteria,2TSXP@28211|Alphaproteobacteria,3JSTP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family	ureC	-	3.5.1.5	ko:K01428	ko00220,ko00230,ko00791,ko01100,ko01120,ko05120,map00220,map00230,map00791,map01100,map01120,map05120	-	R00131	RC02798,RC02806	ko00000,ko00001,ko01000	-	-	-	Amidohydro_1,Urease_alpha
SX1_k127_6119965_2	1297865.APJD01000023_gene1094	2.766e-47	171.0	COG0451@1|root,COG0451@2|Bacteria,1QP8J@1224|Proteobacteria,2U09V@28211|Alphaproteobacteria,3JSK8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Male sterility protein	-	-	5.1.3.2	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00361,M00362,M00632	R00291,R02984	RC00289	ko00000,ko00001,ko00002,ko01000	-	-	-	Epimerase
SX1_k127_6119965_0	1230476.C207_05392	0.0	1092.0	COG0033@1|root,COG0033@2|Bacteria,1MU5S@1224|Proteobacteria,2TRUJ@28211|Alphaproteobacteria,3JQY8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III	MA20_45030	-	5.4.2.2	ko:K01835	ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	M00549	R00959,R01057,R08639	RC00408	ko00000,ko00001,ko00002,ko01000	-	-	-	PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV
SX1_k127_6119965_1	1297865.APJD01000023_gene1096	1.024e-319	979.0	COG0028@1|root,COG0028@2|Bacteria,1MU6U@1224|Proteobacteria,2TSB1@28211|Alphaproteobacteria,3JS64@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Thiamine pyrophosphate enzyme, central domain	budB	-	2.2.1.6	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R00006,R00014,R00226,R03050,R04672,R04673,R08648	RC00027,RC00106,RC01192,RC02744,RC02893	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
SX1_k127_612484_2	1297865.APJD01000003_gene6460	3.535e-95	330.0	COG0025@1|root,COG0025@2|Bacteria,1MW5T@1224|Proteobacteria,2TSHB@28211|Alphaproteobacteria,3JUQI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Sodium/hydrogen exchanger family	MA20_20950	-	-	ko:K03316	-	-	-	-	ko00000	2.A.36	-	-	Na_H_Exchanger
SX1_k127_612484_1	1297865.APJD01000003_gene6461	2.013e-174	548.0	COG0457@1|root,COG0457@2|Bacteria,1N7S8@1224|Proteobacteria,2U07D@28211|Alphaproteobacteria,3JSH1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	LprI,TPR_11,TPR_2
SX1_k127_612484_0	1297865.APJD01000003_gene6462	0.0	1322.0	COG0365@1|root,COG0365@2|Bacteria,1MUF5@1224|Proteobacteria,2TQJR@28211|Alphaproteobacteria,3JV4X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acetyl-coenzyme A synthetase N-terminus	prpE	GO:0003674,GO:0003824,GO:0003987,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006091,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016405,GO:0016874,GO:0016877,GO:0016878,GO:0017144,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046950,GO:0046951,GO:0070013,GO:0071704,GO:1901568,GO:1901570,GO:1901576,GO:1902224	6.2.1.1,6.2.1.17	ko:K01895,ko:K01908	ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200	M00357	R00235,R00236,R00316,R00926,R01354	RC00004,RC00012,RC00043,RC00070,RC02746,RC02816	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACAS_N,AMP-binding,AMP-binding_C
SX1_k127_612484_3	1230476.C207_02590	2.01e-49	179.0	29F1C@1|root,301Z4@2|Bacteria,1NAFW@1224|Proteobacteria,2UFJZ@28211|Alphaproteobacteria,3K1JN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_20930	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_612484_4	172088.AUGA01000001_gene6407	1.38e-15	76.0	COG1835@1|root,COG1835@2|Bacteria,1MV2W@1224|Proteobacteria,2TRT8@28211|Alphaproteobacteria,3JVHT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
SX1_k127_613489_1	1297865.APJD01000006_gene4497	1.781e-233	722.0	COG0422@1|root,COG0422@2|Bacteria,1MUVV@1224|Proteobacteria,2TS0S@28211|Alphaproteobacteria,3JUK5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction	thiC	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	4.1.99.17	ko:K03147	ko00730,ko01100,map00730,map01100	M00127	R03472	RC03251,RC03252	ko00000,ko00001,ko00002,ko01000	-	-	-	ThiC-associated,ThiC_Rad_SAM
SX1_k127_613489_0	1297865.APJD01000006_gene4496	0.0	1218.0	COG2072@1|root,COG2072@2|Bacteria,1MY00@1224|Proteobacteria,2U4J4@28211|Alphaproteobacteria,3JWBN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Flavin-binding monooxygenase-like	-	-	-	-	-	-	-	-	-	-	-	-	FMO-like
SX1_k127_613489_2	1297865.APJD01000006_gene4495	3.021e-143	455.0	COG0344@1|root,COG0344@2|Bacteria,1NKK8@1224|Proteobacteria,2TQXK@28211|Alphaproteobacteria,3JVY6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP	-	-	2.3.1.15	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R00851,R09380	RC00004,RC00039,RC00041	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	G3P_acyltransf
SX1_k127_613489_6	1297865.APJD01000006_gene4494	1.158e-78	278.0	2A71R@1|root,30VX3@2|Bacteria,1RC87@1224|Proteobacteria,2U66C@28211|Alphaproteobacteria,3JYD0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_613489_4	1297865.APJD01000006_gene4493	1.303e-113	368.0	COG4339@1|root,COG4339@2|Bacteria,1MZ9X@1224|Proteobacteria,2U3NC@28211|Alphaproteobacteria,3JXII@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein conserved in bacteria	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_613489_3	1297865.APJD01000006_gene4492	2.544e-124	402.0	COG3663@1|root,COG3663@2|Bacteria,1RAVZ@1224|Proteobacteria,2UDH2@28211|Alphaproteobacteria,3JVC8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Uracil DNA glycosylase superfamily	mug	-	3.2.2.28	ko:K03649	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	UDG
SX1_k127_613489_8	1297865.APJD01000006_gene4491	1.304e-72	262.0	2E560@1|root,30VJN@2|Bacteria,1RA97@1224|Proteobacteria,2U6P4@28211|Alphaproteobacteria,3JYEN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_613489_9	172088.AUGA01000004_gene4031	5.875e-57	201.0	COG2391@1|root,COG2391@2|Bacteria,1MZC0@1224|Proteobacteria,2U99K@28211|Alphaproteobacteria,3JYHS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	transporter component	-	-	-	ko:K07112	-	-	-	-	ko00000	-	-	-	-
SX1_k127_613489_5	172088.AUGA01000004_gene4031	5.431e-93	314.0	COG2391@1|root,COG2391@2|Bacteria,1MZC0@1224|Proteobacteria,2U99K@28211|Alphaproteobacteria,3JYHS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	transporter component	-	-	-	ko:K07112	-	-	-	-	ko00000	-	-	-	-
SX1_k127_613489_7	1297865.APJD01000006_gene4488	5.773e-77	259.0	COG0251@1|root,COG0251@2|Bacteria,1REJQ@1224|Proteobacteria,2U70D@28211|Alphaproteobacteria,3JYTI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Endoribonuclease L-PSP	MA20_01450	-	-	-	-	-	-	-	-	-	-	-	Ribonuc_L-PSP
SX1_k127_6138088_1	1230476.C207_00808	5.425e-33	129.0	COG5457@1|root,COG5457@2|Bacteria,1N1MN@1224|Proteobacteria,2UC2B@28211|Alphaproteobacteria,3K02E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF1127)	MA20_08290	-	-	-	-	-	-	-	-	-	-	-	DUF1127
SX1_k127_6138088_0	1297865.APJD01000034_gene2380	3.19e-286	880.0	COG1167@1|root,COG1167@2|Bacteria,1MUJE@1224|Proteobacteria,2TQZZ@28211|Alphaproteobacteria,3JW05@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix gluconate operon transcriptional repressor	MA20_08285	-	-	-	-	-	-	-	-	-	-	-	Aminotran_1_2,GntR
SX1_k127_6138088_2	1297865.APJD01000034_gene2379	7.292e-17	83.0	2APMN@1|root,31ER2@2|Bacteria,1P6FG@1224|Proteobacteria,2UZ27@28211|Alphaproteobacteria,3K5CM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_6153770_4	1297865.APJD01000014_gene637	2.091e-117	379.0	COG0861@1|root,COG0861@2|Bacteria,1PN8B@1224|Proteobacteria,2TUV5@28211|Alphaproteobacteria,3JTV7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Integral membrane protein TerC family	terC	-	-	-	-	-	-	-	-	-	-	-	TerC
SX1_k127_6153770_2	1230476.C207_06870	8.848e-152	481.0	COG0684@1|root,COG0684@2|Bacteria,1MUES@1224|Proteobacteria,2U0IC@28211|Alphaproteobacteria,3JTIV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Aldolase/RraA	MA20_26380	-	-	-	-	-	-	-	-	-	-	-	RraA-like
SX1_k127_6153770_1	1297865.APJD01000014_gene639	5.312e-181	574.0	COG1183@1|root,COG1183@2|Bacteria,1MWD9@1224|Proteobacteria,2TUF7@28211|Alphaproteobacteria,3JSE1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the CDP-alcohol phosphatidyltransferase class-I family	pssA	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	2.7.8.8	ko:K17103	ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110	M00093	R01800	RC00002,RC00017,RC02795	ko00000,ko00001,ko00002,ko01000	-	-	-	CDP-OH_P_tran_2,CDP-OH_P_transf
SX1_k127_6153770_3	1297865.APJD01000014_gene640	3.42e-150	476.0	COG0688@1|root,COG0688@2|Bacteria,1MW45@1224|Proteobacteria,2TRMG@28211|Alphaproteobacteria,3JRU2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)	psd	-	4.1.1.65	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	M00093	R02055	RC00299	ko00000,ko00001,ko00002,ko01000	-	-	-	PS_Dcarbxylase
SX1_k127_6153770_0	1297865.APJD01000014_gene641	0.0	1297.0	COG5265@1|root,COG5265@2|Bacteria,1NSKS@1224|Proteobacteria,2UQAG@28211|Alphaproteobacteria,3JSVP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	ABC transporter	atm1	GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009507,GO:0009526,GO:0009536,GO:0009555,GO:0009657,GO:0009658,GO:0009889,GO:0009941,GO:0009987,GO:0010035,GO:0010038,GO:0010288,GO:0010380,GO:0016020,GO:0016043,GO:0018130,GO:0019222,GO:0019538,GO:0019637,GO:0019720,GO:0019725,GO:0019866,GO:0022622,GO:0030003,GO:0031090,GO:0031323,GO:0031326,GO:0031966,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0042221,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046686,GO:0046916,GO:0048229,GO:0048364,GO:0048731,GO:0048856,GO:0048878,GO:0050789,GO:0050790,GO:0050794,GO:0050801,GO:0050896,GO:0051171,GO:0051186,GO:0051188,GO:0051189,GO:0051193,GO:0051276,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0065009,GO:0071704,GO:0071840,GO:0090056,GO:0090407,GO:0098771,GO:0099402,GO:1901360,GO:1901362,GO:1901401,GO:1901463,GO:1901564,GO:1901566,GO:1901576	-	ko:K06147	-	-	-	-	ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21	-	-	ABC_membrane,ABC_tran
SX1_k127_6153770_5	1230476.C207_07017	1.633e-106	346.0	COG1611@1|root,COG1611@2|Bacteria,1RD59@1224|Proteobacteria,2U5DP@28211|Alphaproteobacteria,3JU4A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the LOG family	yvdD	-	3.2.2.10	ko:K06966	ko00230,ko00240,map00230,map00240	-	R00182,R00510	RC00063,RC00318	ko00000,ko00001,ko01000	-	-	-	Lysine_decarbox
SX1_k127_617914_2	1297865.APJD01000006_gene4343	2.116e-38	143.0	COG1070@1|root,COG1070@2|Bacteria,1MW4A@1224|Proteobacteria,2TQX6@28211|Alphaproteobacteria,3JTAC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	FGGY family of carbohydrate kinases, C-terminal domain	-	-	2.7.1.17	ko:K00854	ko00040,ko01100,map00040,map01100	M00014	R01639	RC00002,RC00538	ko00000,ko00001,ko00002,ko01000	-	-	-	FGGY_C,FGGY_N
SX1_k127_617914_1	1297865.APJD01000006_gene4344	3.663e-209	651.0	COG2390@1|root,COG2390@2|Bacteria,1MWHQ@1224|Proteobacteria,2TSIT@28211|Alphaproteobacteria,3JT0M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Putative sugar-binding domain	eryD	-	-	-	-	-	-	-	-	-	-	-	Sugar-bind
SX1_k127_617914_0	1297865.APJD01000006_gene4345	5.956e-244	754.0	COG1653@1|root,COG1653@2|Bacteria,1R45P@1224|Proteobacteria,2U0YH@28211|Alphaproteobacteria,3JRA7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Bacterial extracellular solute-binding protein	-	-	-	ko:K02027	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	SBP_bac_1
SX1_k127_6187921_1	1230476.C207_05059	0.0	1412.0	COG1450@1|root,COG1450@2|Bacteria,1MUUA@1224|Proteobacteria,2TT8A@28211|Alphaproteobacteria,3JRKS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NU	general secretion pathway protein D	gspD	-	-	ko:K02453	ko03070,ko05111,map03070,map05111	M00331	-	-	ko00000,ko00001,ko00002,ko02044	3.A.15	-	-	Secretin,Secretin_N
SX1_k127_6187921_5	1297865.APJD01000036_gene1403	1.313e-109	357.0	COG0790@1|root,COG0790@2|Bacteria,1RAX3@1224|Proteobacteria,2UE4B@28211|Alphaproteobacteria,3JY7R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sel1-like repeats.	-	-	-	-	-	-	-	-	-	-	-	-	Sel1
SX1_k127_6187921_0	1297865.APJD01000036_gene1402	0.0	7690.0	COG3210@1|root,COG3210@2|Bacteria,1MXIP@1224|Proteobacteria,2TTVB@28211|Alphaproteobacteria,3JS9Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	haemagglutination activity domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF3739,Glug,Haemagg_act
SX1_k127_6187921_3	1297865.APJD01000036_gene1401	2.8e-205	640.0	COG3712@1|root,COG3712@2|Bacteria,1N28G@1224|Proteobacteria,2U4XK@28211|Alphaproteobacteria,3K6CU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	PT	Domain of unknown function (DUF4974)	-	-	-	ko:K07165	-	-	-	-	ko00000	-	-	-	DUF4974,FecR
SX1_k127_6187921_6	1297865.APJD01000036_gene1400	4.087e-105	347.0	COG1595@1|root,COG1595@2|Bacteria,1NYUZ@1224|Proteobacteria,2UTB6@28211|Alphaproteobacteria,3JY29@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Sigma-70, region 4	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
SX1_k127_6187921_4	1297865.APJD01000036_gene1399	8.083e-123	397.0	COG4773@1|root,COG4773@2|Bacteria,1N09E@1224|Proteobacteria,2UA19@28211|Alphaproteobacteria,3JZQE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Secretin and TonB N terminus short domain	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_6187921_2	1297865.APJD01000036_gene1398	0.0	1031.0	COG3182@1|root,COG3182@2|Bacteria,1MUX8@1224|Proteobacteria,2TVQ6@28211|Alphaproteobacteria,3JRVH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PepSY-associated TM region	-	-	-	-	-	-	-	-	-	-	-	-	PepSY_TM
SX1_k127_6187921_7	1297865.APJD01000036_gene1397	9.104e-94	307.0	COG4774@1|root,COG4774@2|Bacteria,1MV0X@1224|Proteobacteria,2TRX3@28211|Alphaproteobacteria,3JT0F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TonB-dependent Receptor Plug Domain	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SX1_k127_6189795_4	1297865.APJD01000006_gene4505	1.219e-152	485.0	COG0745@1|root,COG0745@2|Bacteria,1MY3D@1224|Proteobacteria,2TTKG@28211|Alphaproteobacteria,3JR9R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Two component transcriptional regulator, winged helix family	MA20_01540	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
SX1_k127_6189795_1	1297865.APJD01000006_gene4504	2.063e-285	892.0	COG0642@1|root,COG2205@2|Bacteria,1MUAK@1224|Proteobacteria,2TSUC@28211|Alphaproteobacteria,3JSFQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain	-	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
SX1_k127_6189795_7	1230476.C207_05642	1.797e-38	146.0	2ADTM@1|root,313J9@2|Bacteria,1N72A@1224|Proteobacteria,2UGQD@28211|Alphaproteobacteria,3K13V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_6189795_5	1297865.APJD01000006_gene4502	3.661e-103	336.0	COG0741@1|root,COG0741@2|Bacteria,1N08U@1224|Proteobacteria,2U82R@28211|Alphaproteobacteria,3JVY0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Transglycosylase SLT domain	-	-	-	-	-	-	-	-	-	-	-	-	SLT
SX1_k127_6189795_2	1297865.APJD01000006_gene4501	1.889e-223	693.0	COG0665@1|root,COG0665@2|Bacteria,1N1TN@1224|Proteobacteria,2TR7B@28211|Alphaproteobacteria,3JVCV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	FAD dependent oxidoreductase	thiO	-	1.4.3.19	ko:K03153	ko00730,ko01100,map00730,map01100	-	R07463	RC01788	ko00000,ko00001,ko01000	-	-	-	DAO
SX1_k127_6189795_8	172088.AUGA01000004_gene4023	4.221e-29	124.0	COG2104@1|root,COG2104@2|Bacteria,1NG8E@1224|Proteobacteria,2UJK6@28211|Alphaproteobacteria,3K1A9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	thiamine biosynthesis protein ThiS	thiS	-	-	ko:K03154	ko04122,map04122	-	-	-	ko00000,ko00001	-	-	-	ThiS
SX1_k127_6189795_3	1297865.APJD01000006_gene4499	6.259e-163	516.0	COG2022@1|root,COG2022@2|Bacteria,1N0N5@1224|Proteobacteria,2TSXS@28211|Alphaproteobacteria,3JTCB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S	thiG	-	2.8.1.10	ko:K03149	ko00730,ko01100,map00730,map01100	-	R10247	RC03096,RC03097,RC03461	ko00000,ko00001,ko01000	-	-	-	ThiG,ThiS
SX1_k127_6189795_6	1038859.AXAU01000013_gene6591	1.847e-99	328.0	COG0352@1|root,COG0352@2|Bacteria,1RDSU@1224|Proteobacteria,2TSXT@28211|Alphaproteobacteria,3JSCI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)	thiE	-	2.5.1.3	ko:K00788	ko00730,ko01100,map00730,map01100	M00127	R03223,R10712	RC00224,RC03255,RC03397	ko00000,ko00001,ko00002,ko01000	-	-	-	TMP-TENI
SX1_k127_6189795_0	1297865.APJD01000006_gene4497	1.166e-305	937.0	COG0422@1|root,COG0422@2|Bacteria,1MUVV@1224|Proteobacteria,2TS0S@28211|Alphaproteobacteria,3JUK5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction	thiC	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	4.1.99.17	ko:K03147	ko00730,ko01100,map00730,map01100	M00127	R03472	RC03251,RC03252	ko00000,ko00001,ko00002,ko01000	-	-	-	ThiC-associated,ThiC_Rad_SAM
SX1_k127_6190170_2	883080.HMPREF9697_03940	8.247e-06	51.0	COG5489@1|root,COG5489@2|Bacteria,1RDVU@1224|Proteobacteria,2U98G@28211|Alphaproteobacteria,3JZBA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF736)	-	-	-	-	-	-	-	-	-	-	-	-	DUF736
SX1_k127_6190170_0	323097.Nham_4483	1.752e-187	595.0	COG4227@1|root,COG4227@2|Bacteria,1MU8I@1224|Proteobacteria,2TRIT@28211|Alphaproteobacteria,3JR5I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Domain of unknown function (DUF1738)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1738
SX1_k127_6190170_1	883080.HMPREF9697_03933	2.018e-113	368.0	28M6F@1|root,2ZAK3@2|Bacteria,1QRV5@1224|Proteobacteria,2TTG0@28211|Alphaproteobacteria,3JWMJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_6203387_3	398525.KB900701_gene7454	4.547e-106	347.0	28X2W@1|root,2ZJ1E@2|Bacteria,1R92Z@1224|Proteobacteria,2TS5H@28211|Alphaproteobacteria,3JXJZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	PcfJ
SX1_k127_6203387_1	1297865.APJD01000018_gene5746	3.574e-222	690.0	COG0667@1|root,COG0667@2|Bacteria,1MWGQ@1224|Proteobacteria,2TUJ8@28211|Alphaproteobacteria,3JRSP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldo/keto reductase family	-	-	1.1.1.122	ko:K00064	ko00051,ko00053,ko01100,ko01110,ko01120,map00051,map00053,map01100,map01110,map01120	M00114	R07675,R08926	RC00066,RC00161	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldo_ket_red
SX1_k127_6203387_2	1297865.APJD01000018_gene5747	5.432e-186	582.0	COG3618@1|root,COG3618@2|Bacteria,1P5PT@1224|Proteobacteria,2U3BR@28211|Alphaproteobacteria,3JU4M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Amidohydrolase	-	-	-	ko:K07046	ko00051,ko01120,map00051,map01120	-	R10689	RC00537	ko00000,ko00001,ko01000	-	-	-	Amidohydro_2
SX1_k127_6203387_0	1297865.APJD01000018_gene5748	0.0	1515.0	COG2183@1|root,COG2183@2|Bacteria,1MUA7@1224|Proteobacteria,2TTSC@28211|Alphaproteobacteria,3JST7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Tex-like protein N-terminal domain	tex	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010212,GO:0044424,GO:0044444,GO:0044464,GO:0050896	-	ko:K06959	-	-	-	-	ko00000	-	-	-	HHH_3,S1,Tex_N,Tex_YqgF
SX1_k127_6205184_1	1297865.APJD01000026_gene2534	3.482e-221	686.0	COG0683@1|root,COG0683@2|Bacteria,1MWNB@1224|Proteobacteria,2U1BV@28211|Alphaproteobacteria,3K2DW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_6205184_2	1297865.APJD01000026_gene2533	6.802e-219	680.0	COG0604@1|root,COG0604@2|Bacteria,1MXUX@1224|Proteobacteria,2VEXE@28211|Alphaproteobacteria,3JWDQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Zinc-binding dehydrogenase	-	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_zinc_N
SX1_k127_6205184_0	1297865.APJD01000026_gene2532	0.0	1106.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3K2WU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	-	-	-	ko:K04116	ko00362,ko01120,map00362,map01120	M00540	R05620	RC00004,RC01438	ko00000,ko00001,ko00002,ko01000	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_6205184_3	1297865.APJD01000026_gene2531	4.224e-155	490.0	COG1028@1|root,COG1028@2|Bacteria,1R4GG@1224|Proteobacteria,2VF4X@28211|Alphaproteobacteria,3K5YF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_6205184_4	1297865.APJD01000026_gene2530	1.891e-45	169.0	COG1028@1|root,COG1028@2|Bacteria,1MW9A@1224|Proteobacteria,2TRDT@28211|Alphaproteobacteria,3JS08@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
SX1_k127_6209942_1	1238182.C882_2436	6.315e-74	255.0	COG0745@1|root,COG0745@2|Bacteria,1MWZ5@1224|Proteobacteria,2TV3A@28211|Alphaproteobacteria,2JRV6@204441|Rhodospirillales	204441|Rhodospirillales	T	COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain	kdpE	-	-	ko:K07667	ko02020,ko02024,map02020,map02024	M00454	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
SX1_k127_6209942_0	1297865.APJD01000023_gene1109	0.0	1058.0	COG0642@1|root,COG2205@2|Bacteria,1NC1Z@1224|Proteobacteria,2U2BU@28211|Alphaproteobacteria,3JXGD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Domain of unknown function (DUF4118)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4118,HATPase_c,HisKA
SX1_k127_6218107_0	1297865.APJD01000010_gene4963	1.579e-163	515.0	COG0642@1|root,COG2205@2|Bacteria,1MUAK@1224|Proteobacteria,2TSUC@28211|Alphaproteobacteria,3JVQQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain	-	-	-	-	-	-	-	-	-	-	-	-	HAMP,HATPase_c,HisKA
SX1_k127_6218107_1	1297865.APJD01000010_gene4962	2.825e-96	318.0	2EE7W@1|root,3382F@2|Bacteria,1NFC5@1224|Proteobacteria,2UINU@28211|Alphaproteobacteria,3K1C8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	EF hand	-	-	-	-	-	-	-	-	-	-	-	-	EF-hand_5
SX1_k127_6218107_2	1297865.APJD01000010_gene4961	6.084e-93	307.0	COG1846@1|root,COG1846@2|Bacteria,1RAVH@1224|Proteobacteria,2U6I0@28211|Alphaproteobacteria,3K69P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	-	GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	MarR
SX1_k127_6218107_3	1297865.APJD01000010_gene4960	4.602e-79	270.0	COG1764@1|root,COG1764@2|Bacteria,1RD92@1224|Proteobacteria,2VGCK@28211|Alphaproteobacteria,3JY9H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	OsmC-like protein	-	-	-	-	-	-	-	-	-	-	-	-	OsmC
SX1_k127_6224077_2	1297865.APJD01000036_gene1499	6.73e-203	631.0	COG0339@1|root,COG0339@2|Bacteria,1MU1K@1224|Proteobacteria,2TRCK@28211|Alphaproteobacteria,3JSDU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Peptidase family M3	dcp	GO:0003674,GO:0003824,GO:0004180,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0016787,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564	3.4.15.5	ko:K01284	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_M3
SX1_k127_6224077_4	1297865.APJD01000036_gene1500	4.192e-139	444.0	COG3683@1|root,COG3683@2|Bacteria,1R4QA@1224|Proteobacteria,2VGNV@28211|Alphaproteobacteria,3JTXM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1007)	MA20_06510	-	-	-	-	-	-	-	-	-	-	-	DUF1007
SX1_k127_6224077_1	1297865.APJD01000036_gene1501	8.331e-223	700.0	COG2215@1|root,COG2215@2|Bacteria,1MWIW@1224|Proteobacteria,2TSIM@28211|Alphaproteobacteria,3JU9V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the NiCoT transporter (TC 2.A.52) family	-	-	-	ko:K08970	-	-	-	-	ko00000,ko02000	2.A.52.2	-	-	NicO
SX1_k127_6224077_6	1297865.APJD01000036_gene1502	4.379e-80	267.0	COG3686@1|root,COG3686@2|Bacteria,1N8EA@1224|Proteobacteria,2UG4X@28211|Alphaproteobacteria,3JYE9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	MAPEG family	-	-	-	-	-	-	-	-	-	-	-	-	MAPEG
SX1_k127_6224077_0	1297865.APJD01000036_gene1503	1.291e-228	709.0	COG0276@1|root,COG0276@2|Bacteria,1MVR1@1224|Proteobacteria,2TSMS@28211|Alphaproteobacteria,3JRNW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the ferrous insertion into protoporphyrin IX	hemH	GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	4.99.1.1,4.99.1.9	ko:K01772	ko00860,ko01100,ko01110,map00860,map01100,map01110	M00121	R00310,R11329	RC01012	ko00000,ko00001,ko00002,ko01000	-	-	-	Ferrochelatase
SX1_k127_6224077_3	1297865.APJD01000036_gene1504	2.041e-201	630.0	COG0330@1|root,COG0330@2|Bacteria,1MUM8@1224|Proteobacteria,2TRUY@28211|Alphaproteobacteria,3JSWN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	prohibitin homologues	qmcA	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	Band_7,Band_7_C
SX1_k127_6224077_5	1297865.APJD01000036_gene1505	4.776e-89	294.0	COG1585@1|root,COG1585@2|Bacteria,1N241@1224|Proteobacteria,2UC8X@28211|Alphaproteobacteria,3JY4I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	OU	NfeD-like C-terminal, partner-binding	MA20_06475	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K07340	-	-	-	-	ko00000	-	-	-	NfeD
SX1_k127_6224077_7	398525.KB900701_gene2529	2.002e-58	207.0	COG1733@1|root,COG1733@2|Bacteria,1N0WG@1224|Proteobacteria,2U9MA@28211|Alphaproteobacteria,3K082@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	HxlR-like helix-turn-helix	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
SX1_k127_6224077_8	1297865.APJD01000036_gene1507	5.508e-11	62.0	COG2128@1|root,COG2128@2|Bacteria,1MWWX@1224|Proteobacteria,2TQPH@28211|Alphaproteobacteria,3JRFX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Carboxymuconolactone decarboxylase family	-	-	-	-	-	-	-	-	-	-	-	-	CMD
SX1_k127_623753_19	1297865.APJD01000047_gene4831	5.652e-53	188.0	2C1G3@1|root,30256@2|Bacteria,1NBF4@1224|Proteobacteria,2UFSX@28211|Alphaproteobacteria,3K0ZG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_623753_10	1297865.APJD01000047_gene4832	2.489e-176	552.0	COG1409@1|root,COG1409@2|Bacteria,1MWKX@1224|Proteobacteria,2U5MK@28211|Alphaproteobacteria,3JWS0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes	cpdA	-	3.1.4.53	ko:K03651	ko00230,ko02025,map00230,map02025	-	R00191	RC00296	ko00000,ko00001,ko01000	-	-	-	Metallophos
SX1_k127_623753_9	1297865.APJD01000047_gene4833	1.587e-188	589.0	COG0788@1|root,COG0788@2|Bacteria,1MVCF@1224|Proteobacteria,2TR4V@28211|Alphaproteobacteria,3JRFA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4)	purU	-	3.5.1.10	ko:K01433	ko00630,ko00670,map00630,map00670	-	R00944	RC00026,RC00111	ko00000,ko00001,ko01000	-	-	-	ACT,Formyl_trans_N
SX1_k127_623753_11	1297865.APJD01000047_gene4834	4.571e-175	550.0	COG1587@1|root,COG1587@2|Bacteria,1N93T@1224|Proteobacteria,2TRG8@28211|Alphaproteobacteria,3JR6G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Uroporphyrinogen-III synthase HemD	-	-	4.2.1.75	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R03165	RC01861	ko00000,ko00001,ko00002,ko01000	-	-	-	HEM4
SX1_k127_623753_14	172088.AUGA01000010_gene1540	2.612e-160	510.0	COG0451@1|root,COG0451@2|Bacteria,1MUGT@1224|Proteobacteria,2TRF6@28211|Alphaproteobacteria,3JTUM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	GM	Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction	fcl	-	1.1.1.271	ko:K02377	ko00051,ko00520,ko01100,map00051,map00520,map01100	-	R05692	RC01014	ko00000,ko00001,ko01000	-	-	-	Epimerase
SX1_k127_623753_6	1297865.APJD01000050_gene372	1.905e-230	715.0	COG1089@1|root,COG1089@2|Bacteria,1MUX0@1224|Proteobacteria,2TR8G@28211|Alphaproteobacteria,3JSHE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose	gmd	-	4.2.1.47	ko:K01711	ko00051,ko00520,ko01100,map00051,map00520,map01100	-	R00888	RC00402	ko00000,ko00001,ko01000	-	-	-	GDP_Man_Dehyd
SX1_k127_623753_5	1297865.APJD01000044_gene6891	2.436e-233	723.0	COG0673@1|root,COG0673@2|Bacteria,1MUP0@1224|Proteobacteria,2VF2U@28211|Alphaproteobacteria,3JVEI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Oxidoreductase family, C-terminal alpha/beta domain	-	-	-	-	-	-	-	-	-	-	-	-	GFO_IDH_MocA,GFO_IDH_MocA_C
SX1_k127_623753_17	1297865.APJD01000044_gene6892	5.335e-95	321.0	COG1045@1|root,COG1045@2|Bacteria,1QWJD@1224|Proteobacteria,2TWZD@28211|Alphaproteobacteria,3JYB2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Hexapeptide repeat of succinyl-transferase	-	-	-	-	-	-	-	-	-	-	-	-	Hexapep,Hexapep_2
SX1_k127_623753_4	1297865.APJD01000044_gene6893	1.732e-238	737.0	COG0399@1|root,COG0399@2|Bacteria,1MUPN@1224|Proteobacteria,2TRIQ@28211|Alphaproteobacteria,3JU8X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the DegT DnrJ EryC1 family	-	-	-	-	-	-	-	-	-	-	-	-	DegT_DnrJ_EryC1
SX1_k127_623753_16	1297865.APJD01000044_gene6894	1.064e-114	370.0	COG0241@1|root,COG0241@2|Bacteria,1RDGR@1224|Proteobacteria,2TRW1@28211|Alphaproteobacteria,3JUVW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	D,D-heptose 1,7-bisphosphate phosphatase	-	-	3.1.3.82,3.1.3.83	ko:K03273	ko00540,ko01100,map00540,map01100	M00064	R05647,R09771	RC00017	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	HAD_2,Hydrolase_6,Hydrolase_like,NTP_transferase
SX1_k127_623753_2	1297865.APJD01000044_gene6895	5.137e-260	805.0	COG1541@1|root,COG1541@2|Bacteria,1MV1W@1224|Proteobacteria,2TQN5@28211|Alphaproteobacteria,3JSCQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	AMP-binding enzyme	MA20_42595	-	6.2.1.30	ko:K01912	ko00360,ko01120,ko05111,map00360,map01120,map05111	-	R02539	RC00004,RC00014	ko00000,ko00001,ko01000	-	-	-	AMP-binding,AMP-binding_C_2
SX1_k127_623753_3	1297865.APJD01000044_gene6896	5.481e-257	796.0	COG2942@1|root,COG2942@2|Bacteria,1PE13@1224|Proteobacteria,2U4P6@28211|Alphaproteobacteria,3JR7V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)	MA20_42590	-	5.1.3.8,5.3.1.8	ko:K01787,ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	M00114	R01207,R01819	RC00290,RC00376	ko00000,ko00001,ko00002,ko01000	-	-	-	GlcNAc_2-epim
SX1_k127_623753_13	1297865.APJD01000044_gene6897	2.269e-171	539.0	COG0410@1|root,COG0410@2|Bacteria,1MVVC@1224|Proteobacteria,2TT8N@28211|Alphaproteobacteria,3JSX4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ATPases associated with a variety of cellular activities	MA20_42585	-	-	ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran
SX1_k127_623753_1	1297865.APJD01000044_gene6898	7.242e-275	869.0	COG0683@1|root,COG0683@2|Bacteria,1MV5T@1224|Proteobacteria,2V9EY@28211|Alphaproteobacteria,3JR88@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein	MA20_42580	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_623753_7	1297865.APJD01000044_gene6899	7.778e-224	694.0	COG4177@1|root,COG4177@2|Bacteria,1MV66@1224|Proteobacteria,2TT26@28211|Alphaproteobacteria,3JSMK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	MA20_42575	-	-	ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_623753_8	1230476.C207_01283	5.375e-189	593.0	COG0559@1|root,COG0559@2|Bacteria,1N54M@1224|Proteobacteria,2TTF5@28211|Alphaproteobacteria,3JS6W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	MA20_42570	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_623753_18	1230476.C207_01284	3.609e-70	240.0	COG2852@1|root,COG2852@2|Bacteria,1N0QU@1224|Proteobacteria,2UFZ7@28211|Alphaproteobacteria,3K0HZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF559)	-	-	-	-	-	-	-	-	-	-	-	-	DUF559
SX1_k127_623753_0	1297865.APJD01000044_gene6901	0.0	1303.0	COG1022@1|root,COG1022@2|Bacteria,1MU4D@1224|Proteobacteria,2TSSI@28211|Alphaproteobacteria,3JTHV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	AMP-binding enzyme	MA20_42565	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding
SX1_k127_623753_12	1297865.APJD01000044_gene6902	3.865e-174	548.0	COG0411@1|root,COG0411@2|Bacteria,1MUTY@1224|Proteobacteria,2TQK1@28211|Alphaproteobacteria,3JT7I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid ATP-binding cassette transporter	MA20_42560	-	-	ko:K01995,ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_623753_15	1297865.APJD01000044_gene6903	7.302e-141	448.0	COG0664@1|root,COG0664@2|Bacteria,1MUHT@1224|Proteobacteria,2U1RI@28211|Alphaproteobacteria,3JRZC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Cyclic nucleotide-monophosphate binding domain	MA20_42555	-	-	-	-	-	-	-	-	-	-	-	HTH_Crp_2,cNMP_binding
SX1_k127_6239115_11	1297865.APJD01000010_gene5138	3.96e-77	262.0	COG3238@1|root,COG3238@2|Bacteria,1N6ZC@1224|Proteobacteria,2UFXH@28211|Alphaproteobacteria,3JZU8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative inner membrane exporter, YdcZ	-	-	-	ko:K09936	ko02024,map02024	-	-	-	ko00000,ko00001,ko02000	2.A.7.21	-	-	DMT_YdcZ
SX1_k127_6239115_1	1297865.APJD01000010_gene5139	0.0	1065.0	COG0488@1|root,COG0488@2|Bacteria,1MU37@1224|Proteobacteria,2TQRZ@28211|Alphaproteobacteria,3JV37@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	ABC transporter	MA20_28645	-	3.6.3.29,3.6.3.41	ko:K06022,ko:K06158,ko:K10834	-	-	-	-	ko00000,ko01000,ko03012	-	-	-	ABC_tran,ABC_tran_Xtn
SX1_k127_6239115_9	1297865.APJD01000010_gene5140	3.198e-136	441.0	COG0110@1|root,COG0110@2|Bacteria,1MUCJ@1224|Proteobacteria,2U0PZ@28211|Alphaproteobacteria,3JUJG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bacterial transferase hexapeptide (six repeats)	-	-	-	-	-	-	-	-	-	-	-	-	Hexapep
SX1_k127_6239115_6	1297865.APJD01000010_gene5141	5.551e-190	597.0	COG0412@1|root,COG0412@2|Bacteria,1R5J6@1224|Proteobacteria,2TVEA@28211|Alphaproteobacteria,3JTUW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	3.1.1.45	ko:K01061	ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130	-	R03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222	RC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686	ko00000,ko00001,ko01000	-	-	-	DLH
SX1_k127_6239115_5	1297865.APJD01000010_gene5142	8.727e-208	645.0	COG0491@1|root,COG0491@2|Bacteria,1QH44@1224|Proteobacteria,2TT1Q@28211|Alphaproteobacteria,3JT3P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metallo-beta-lactamase superfamily	MA20_28665	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
SX1_k127_6239115_3	1297865.APJD01000010_gene5143	2.4e-220	685.0	COG3437@1|root,COG3437@2|Bacteria,1QW6V@1224|Proteobacteria,2TWQE@28211|Alphaproteobacteria,3K6P4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KT	HD domain	-	-	-	-	-	-	-	-	-	-	-	-	HD,HD_5,Response_reg
SX1_k127_6239115_16	1297865.APJD01000010_gene5144	1.895e-33	129.0	2CG10@1|root,302BW@2|Bacteria,1NCIS@1224|Proteobacteria,2UFZ9@28211|Alphaproteobacteria,3K10W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_6239115_12	1297865.APJD01000010_gene5145	1.477e-57	202.0	2CBFG@1|root,3242T@2|Bacteria,1RJV7@1224|Proteobacteria,2UB9A@28211|Alphaproteobacteria,3JZG4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PilZ domain	-	-	-	-	-	-	-	-	-	-	-	-	PilZ
SX1_k127_6239115_4	1297865.APJD01000010_gene5146	1.246e-210	658.0	COG5330@1|root,COG5330@2|Bacteria,1N44K@1224|Proteobacteria,2U0HY@28211|Alphaproteobacteria,3JVJ2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterised protein conserved in bacteria (DUF2336)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2336
SX1_k127_6239115_7	1297865.APJD01000010_gene5147	4.492e-176	556.0	COG2207@1|root,COG2207@2|Bacteria,1P3X1@1224|Proteobacteria,2TRDS@28211|Alphaproteobacteria,3JRST@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	ko:K04033	-	-	-	-	ko00000,ko03000	-	-	-	HTH_18
SX1_k127_6239115_13	1230476.C207_05323	1.825e-45	167.0	2DFGN@1|root,2ZRS9@2|Bacteria,1NB05@1224|Proteobacteria,2UI9V@28211|Alphaproteobacteria,3K1IJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_39905	-	-	-	-	-	-	-	-	-	-	-	PilZ
SX1_k127_6239115_15	1297865.APJD01000010_gene5149	1.055e-41	154.0	2E6BG@1|root,330Z9@2|Bacteria,1N126@1224|Proteobacteria,2UBZB@28211|Alphaproteobacteria,3K05H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_28695	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_6239115_8	1297865.APJD01000010_gene5150	2.499e-146	464.0	COG0778@1|root,COG0778@2|Bacteria,1MWMJ@1224|Proteobacteria,2TU8B@28211|Alphaproteobacteria,3JWAG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Nitroreductase family	MA20_28705	-	-	-	-	-	-	-	-	-	-	-	Nitroreductase
SX1_k127_6239115_2	1297865.APJD01000010_gene5151	7.312e-248	767.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TQKE@28211|Alphaproteobacteria,3JVH0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_6239115_0	1297865.APJD01000001_gene6048	0.0	1237.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,2TQR7@28211|Alphaproteobacteria,3JS9M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NT	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).	MA20_28740	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	HAMP,MCPsignal
SX1_k127_6239115_14	1297865.APJD01000001_gene6047	5.489e-43	159.0	2ABGZ@1|root,310Y1@2|Bacteria,1N0GR@1224|Proteobacteria,2UCP1@28211|Alphaproteobacteria,3K015@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_6239115_10	1297865.APJD01000001_gene6046	9.218e-130	415.0	COG0431@1|root,COG0431@2|Bacteria,1MXQ8@1224|Proteobacteria,2TRI5@28211|Alphaproteobacteria,3JU1I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Flavodoxin-like fold	MA20_28735	-	-	-	-	-	-	-	-	-	-	-	FMN_red
SX1_k127_6250720_1	1297865.APJD01000007_gene2129	2.53e-207	646.0	COG0598@1|root,COG0598@2|Bacteria,1MWMP@1224|Proteobacteria,2TQQD@28211|Alphaproteobacteria,3JTS3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	CorA-like Mg2+ transporter protein	corA	-	-	ko:K03284	-	-	-	-	ko00000,ko02000	1.A.35.1,1.A.35.3	-	-	CorA
SX1_k127_6250720_10	1230476.C207_02963	1.708e-39	147.0	2BSC4@1|root,32MDZ@2|Bacteria,1N1A0@1224|Proteobacteria,2UCPW@28211|Alphaproteobacteria,3K0R8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_6250720_4	1297865.APJD01000007_gene2130	1.722e-160	507.0	COG1028@1|root,COG1028@2|Bacteria,1MVT2@1224|Proteobacteria,2TQKU@28211|Alphaproteobacteria,3JS01@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	fixR	-	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
SX1_k127_6250720_5	1297865.APJD01000007_gene2131	1.918e-146	464.0	COG0259@1|root,COG0259@2|Bacteria,1NZUU@1224|Proteobacteria,2TT1U@28211|Alphaproteobacteria,3JS9R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP)	pdxH	GO:0003674,GO:0003824,GO:0004733,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016638,GO:0016641,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046184,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617	1.4.3.5	ko:K00275	ko00750,ko01100,ko01120,map00750,map01100,map01120	M00124	R00277,R00278,R01710,R01711	RC00048,RC00116	ko00000,ko00001,ko00002,ko01000	-	-	-	PNP_phzG_C,Putative_PNPOx
SX1_k127_6250720_9	398525.KB900701_gene3308	1.163e-76	260.0	COG4520@1|root,COG4520@2|Bacteria,1N1T9@1224|Proteobacteria,2UCN2@28211|Alphaproteobacteria,3JYD9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	17 kDa outer membrane surface antigen	MA20_07440	-	-	-	-	-	-	-	-	-	-	-	17kDa_Anti_2
SX1_k127_6250720_2	1297865.APJD01000007_gene2133	3.414e-205	638.0	COG0484@1|root,COG0484@2|Bacteria,1MUZ4@1224|Proteobacteria,2TR01@28211|Alphaproteobacteria,3JQPS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	DnaJ C terminal domain	dnaJ2	-	-	-	-	-	-	-	-	-	-	-	DnaJ,DnaJ_C
SX1_k127_6250720_3	1297865.APJD01000007_gene2134	1.73e-166	524.0	COG5662@1|root,COG5662@2|Bacteria,1RK1X@1224|Proteobacteria,2U8SM@28211|Alphaproteobacteria,3JTT0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	transmembrane transcriptional regulator (Anti-sigma factor)	MA20_07450	-	-	-	-	-	-	-	-	-	-	-	zf-HC2
SX1_k127_6250720_8	1230476.C207_02957	1.276e-92	307.0	COG1595@1|root,COG1595@2|Bacteria,1MZMC@1224|Proteobacteria,2TU76@28211|Alphaproteobacteria,3JTYJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Belongs to the sigma-70 factor family. ECF subfamily	MA20_07455	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
SX1_k127_6250720_6	1297865.APJD01000007_gene2136	5.607e-121	396.0	COG0406@1|root,COG0406@2|Bacteria,1NPC4@1224|Proteobacteria,2U9WD@28211|Alphaproteobacteria,3JRMW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Phosphoglycerate mutase family	gpmB	-	5.4.2.12	ko:K15634	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003	R01518	RC00536	ko00000,ko00001,ko00002,ko01000	-	-	-	His_Phos_1
SX1_k127_6250720_0	1297865.APJD01000007_gene2137	1.955e-236	732.0	COG0082@1|root,COG0082@2|Bacteria,1MU98@1224|Proteobacteria,2TQY2@28211|Alphaproteobacteria,3JRF1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system	aroC	GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576	4.2.3.5	ko:K01736	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00022	R01714	RC00586	ko00000,ko00001,ko00002,ko01000	-	-	-	Chorismate_synt
SX1_k127_6251909_0	1297865.APJD01000020_gene257	1.835e-226	703.0	COG0477@1|root,COG2814@2|Bacteria,1R7QS@1224|Proteobacteria,2TUXM@28211|Alphaproteobacteria,3JS25@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_6251909_1	1297865.APJD01000020_gene256	6.505e-92	302.0	COG2877@1|root,COG2877@2|Bacteria,1MV91@1224|Proteobacteria,2TRJX@28211|Alphaproteobacteria,3JUB6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	3-deoxy-D-manno-octulosonic acid 8-phosphate synthase	kdsA	-	2.5.1.55	ko:K01627	ko00540,ko01100,map00540,map01100	M00063	R03254	RC00435	ko00000,ko00001,ko00002,ko01000,ko01005	-	-	-	DAHP_synth_1
SX1_k127_6254283_2	1297865.APJD01000020_gene161	1.748e-97	320.0	COG1846@1|root,COG1846@2|Bacteria,1R6ZW@1224|Proteobacteria,2U1UE@28211|Alphaproteobacteria,3JX7K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR_2
SX1_k127_6254283_0	1297865.APJD01000020_gene160	9.955e-278	853.0	COG4638@1|root,COG4638@2|Bacteria,1MX47@1224|Proteobacteria,2TV3I@28211|Alphaproteobacteria,3JS2U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rieske [2Fe-2S] domain	-	-	1.14.13.229,1.14.19.48	ko:K21323	-	-	-	-	ko00000,ko01000	-	-	-	Rieske,Ring_hydroxyl_A
SX1_k127_6254283_1	1297865.APJD01000020_gene159	7.945e-243	756.0	COG2271@1|root,COG2271@2|Bacteria,1MWYR@1224|Proteobacteria,2TSXW@28211|Alphaproteobacteria,3JTZP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Transmembrane secretion effector	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_6264077_2	1297865.APJD01000014_gene543	1.509e-141	450.0	COG1804@1|root,COG1804@2|Bacteria,1MVY1@1224|Proteobacteria,2TVJ9@28211|Alphaproteobacteria,3JSQ1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA-transferase family III	MA20_27250	-	2.8.3.16	ko:K07749	-	-	-	-	ko00000,ko01000	-	-	-	CoA_transf_3
SX1_k127_6264077_3	1297865.APJD01000014_gene544	7.774e-30	119.0	29G04@1|root,302XX@2|Bacteria,1N9KT@1224|Proteobacteria,2UHEY@28211|Alphaproteobacteria,3K1DV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_27245	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_6264077_0	1297865.APJD01000014_gene545	0.0	1063.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JR7R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	-	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding,AMP-binding_C
SX1_k127_6264077_1	1297865.APJD01000014_gene546	4.731e-175	549.0	COG0183@1|root,COG0183@2|Bacteria,1MU8C@1224|Proteobacteria,2TS6P@28211|Alphaproteobacteria,3JT7E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the thiolase family	MA20_27240	-	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
SX1_k127_6266304_0	1297865.APJD01000003_gene6360	6.172e-219	678.0	COG3396@1|root,COG3396@2|Bacteria,1MXUK@1224|Proteobacteria,2TTIG@28211|Alphaproteobacteria,3JSI1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	benzoyl-CoA oxygenase	boxB	-	1.14.13.208	ko:K15512	ko00362,map00362	-	R09555	RC01739	ko00000,ko00001,ko01000	-	-	-	-
SX1_k127_6266304_3	224911.27348962	0.0009052	49.0	COG2050@1|root,COG2050@2|Bacteria,1R5RX@1224|Proteobacteria,2U1DZ@28211|Alphaproteobacteria,3JVKP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Thioesterase-like superfamily	MA20_24410	-	-	-	-	-	-	-	-	-	-	-	4HBT_3
SX1_k127_6266304_1	1297865.APJD01000003_gene6361	1.584e-166	527.0	COG1028@1|root,COG1028@2|Bacteria,1MVYJ@1224|Proteobacteria,2TRJ8@28211|Alphaproteobacteria,3JTBC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	MA20_22460	-	1.1.1.127	ko:K00065	ko00040,map00040	-	R01542	RC00089	ko00000,ko00001,ko01000	-	-	-	adh_short_C2
SX1_k127_6266304_2	1230476.C207_02760	3.371e-15	74.0	COG0726@1|root,COG0726@2|Bacteria,1MVKH@1224|Proteobacteria,2TTEI@28211|Alphaproteobacteria,3JQWS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	polysaccharide deacetylase	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_deac_1
SX1_k127_6268901_8	1297865.APJD01000006_gene4764	6.352e-118	381.0	COG5342@1|root,COG5342@2|Bacteria,1N0W3@1224|Proteobacteria,2UCMY@28211|Alphaproteobacteria,3JWSS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Invasion associated locus B (IalB) protein	invB	-	-	-	-	-	-	-	-	-	-	-	IalB
SX1_k127_6268901_9	1297865.APJD01000006_gene4763	2.468e-97	318.0	COG0454@1|root,COG0456@2|Bacteria,1QGYZ@1224|Proteobacteria,2U1DB@28211|Alphaproteobacteria,3JWXF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Acetyltransferase (GNAT) family	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
SX1_k127_6268901_0	1297865.APJD01000006_gene4762	0.0	1118.0	COG0747@1|root,COG0747@2|Bacteria,1MUZH@1224|Proteobacteria,2TR1D@28211|Alphaproteobacteria,3JWCD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Bacterial extracellular solute-binding proteins, family 5 Middle	-	-	-	ko:K02035	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	SBP_bac_5
SX1_k127_6268901_4	1297865.APJD01000006_gene4761	1.521e-186	584.0	COG0601@1|root,COG0601@2|Bacteria,1MU8Z@1224|Proteobacteria,2TR68@28211|Alphaproteobacteria,3JW0P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02033	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
SX1_k127_6268901_5	1297865.APJD01000006_gene4760	3.74e-175	551.0	COG1173@1|root,COG1173@2|Bacteria,1MXGS@1224|Proteobacteria,2TTQ7@28211|Alphaproteobacteria,3JVF4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02034	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1,OppC_N
SX1_k127_6268901_7	1336235.JAEG01000008_gene1352	6.141e-123	402.0	COG0444@1|root,COG0444@2|Bacteria,1R4KB@1224|Proteobacteria,2TR0J@28211|Alphaproteobacteria,4B7FM@82115|Rhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the ABC transporter superfamily	-	-	-	ko:K02031	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
SX1_k127_6268901_3	1297865.APJD01000006_gene4758	8.534e-217	678.0	COG4608@1|root,COG4608@2|Bacteria,1NU4K@1224|Proteobacteria,2TQTV@28211|Alphaproteobacteria,3JR82@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Oligopeptide/dipeptide transporter, C-terminal region	-	-	-	ko:K02032	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
SX1_k127_6268901_6	1297865.APJD01000006_gene4757	5.601e-129	415.0	COG1309@1|root,COG1309@2|Bacteria,1N2VD@1224|Proteobacteria,2U0HH@28211|Alphaproteobacteria,3JVMP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Transcriptional regulator	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_6268901_1	1297865.APJD01000006_gene4756	2.533e-243	755.0	COG1566@1|root,COG1566@2|Bacteria,1MU7I@1224|Proteobacteria,2TS39@28211|Alphaproteobacteria,3JWZI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Biotin-lipoyl like	-	-	-	ko:K03543	-	M00701	-	-	ko00000,ko00002,ko02000	8.A.1.1	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
SX1_k127_6268901_2	1297865.APJD01000006_gene4755	2.885e-224	696.0	COG0477@1|root,COG2814@2|Bacteria,1R5T5@1224|Proteobacteria,2U2DF@28211|Alphaproteobacteria,3JV8D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	-	-	-	ko:K03446	-	M00701	-	-	ko00000,ko00002,ko02000	2.A.1.3	-	-	MFS_1
SX1_k127_6271967_1	1230476.C207_01648	4.585e-233	721.0	COG3173@1|root,COG3173@2|Bacteria,1MWAK@1224|Proteobacteria,2TT2N@28211|Alphaproteobacteria,3JV5A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Ecdysteroid kinase	MA20_31030	-	-	-	-	-	-	-	-	-	-	-	APH
SX1_k127_6271967_0	1297865.APJD01000002_gene4054	2.004e-273	846.0	COG1960@1|root,COG1960@2|Bacteria,1MU2V@1224|Proteobacteria,2TSK3@28211|Alphaproteobacteria,3JTM1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	acyl-CoA dehydrogenase	MA20_31035	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_6271967_3	1297865.APJD01000002_gene4053	4.185e-141	453.0	COG1309@1|root,COG1309@2|Bacteria,1RDIM@1224|Proteobacteria,2VEVK@28211|Alphaproteobacteria,3JVA7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	MA20_31040	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_6271967_2	1297865.APJD01000002_gene4052	6.992e-168	527.0	COG2503@1|root,COG2503@2|Bacteria,1R4QB@1224|Proteobacteria,2U268@28211|Alphaproteobacteria,3K2R1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	HAD superfamily, subfamily IIIB (Acid phosphatase)	-	-	-	-	-	-	-	-	-	-	-	-	Acid_phosphat_B
SX1_k127_6273031_1	1297865.APJD01000011_gene6586	0.0	1485.0	COG2114@1|root,COG4252@1|root,COG2114@2|Bacteria,COG4252@2|Bacteria,1MV1V@1224|Proteobacteria,2TRTY@28211|Alphaproteobacteria,3JQS3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	CHASE2	cyaD	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	CHASE2,Guanylate_cyc
SX1_k127_6273031_0	1297865.APJD01000011_gene6585	0.0	2711.0	COG2931@1|root,COG4254@1|root,COG2931@2|Bacteria,COG4254@2|Bacteria,1MU7T@1224|Proteobacteria,2TV0C@28211|Alphaproteobacteria,3JS2H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	QU	FecR protein	-	-	-	-	-	-	-	-	-	-	-	-	Cadherin_3,FecR,HemolysinCabind,Laminin_G_3,VWA
SX1_k127_6273031_7	1297865.APJD01000011_gene6584	6.07e-159	505.0	COG3672@1|root,COG3672@2|Bacteria,1RDQS@1224|Proteobacteria,2TTZT@28211|Alphaproteobacteria,3JVGR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bacterial transglutaminase-like cysteine proteinase BTLCP	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C93
SX1_k127_6273031_3	1297865.APJD01000011_gene6583	2.098e-258	807.0	COG0683@1|root,COG0683@2|Bacteria,1MWR8@1224|Proteobacteria,2UQXU@28211|Alphaproteobacteria,3JS0Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	MA20_19420	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_6273031_2	1297865.APJD01000011_gene6582	0.0	1298.0	COG1022@1|root,COG1022@2|Bacteria,1MU4D@1224|Proteobacteria,2TSSI@28211|Alphaproteobacteria,3JSSQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	AMP-binding enzyme	MA20_19425	-	6.2.1.3	ko:K01897	ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920	M00086	R01280	RC00004,RC00014	ko00000,ko00001,ko00002,ko01000,ko01004,ko04147	4.C.1.1	-	-	AMP-binding
SX1_k127_6273031_6	1297865.APJD01000011_gene6581	3.102e-163	516.0	COG0410@1|root,COG0410@2|Bacteria,1MVVC@1224|Proteobacteria,2TR61@28211|Alphaproteobacteria,3JUH1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	AAA domain, putative AbiEii toxin, Type IV TA system	MA20_19430	-	-	ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,DLIC
SX1_k127_6273031_9	1297865.APJD01000011_gene6580	1.141e-154	509.0	COG0411@1|root,COG0411@2|Bacteria,1MUTY@1224|Proteobacteria,2TVJU@28211|Alphaproteobacteria,3JQXN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid ATP-binding cassette transporter	MA20_19435	-	-	ko:K01995	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_6273031_4	1297865.APJD01000011_gene6579	4.228e-234	726.0	COG4177@1|root,COG4177@2|Bacteria,1MV66@1224|Proteobacteria,2TV37@28211|Alphaproteobacteria,3JRUP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	MA20_19440	-	-	ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_6273031_5	1297865.APJD01000011_gene6578	2.808e-180	565.0	COG0559@1|root,COG0559@2|Bacteria,1MU25@1224|Proteobacteria,2TSDS@28211|Alphaproteobacteria,3JTSI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Branched-chain amino acid transport system / permease component	MA20_19445	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_6273031_8	1297865.APJD01000011_gene6577	3.133e-155	494.0	COG1131@1|root,COG1131@2|Bacteria,1MUX3@1224|Proteobacteria,2TY37@28211|Alphaproteobacteria,3JRC1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	ATPases associated with a variety of cellular activities	MA20_19450	-	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
SX1_k127_6273031_10	1297865.APJD01000011_gene6576	2.98e-147	479.0	2CJVH@1|root,2Z82D@2|Bacteria,1MX2M@1224|Proteobacteria,2TTCY@28211|Alphaproteobacteria,3JSEN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_19455	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	-
SX1_k127_6274270_6	1297865.APJD01000011_gene6773	5.61e-133	429.0	COG1309@1|root,COG1309@2|Bacteria,1QTG5@1224|Proteobacteria,2U294@28211|Alphaproteobacteria,3JWM0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	TetR_C_7,TetR_N
SX1_k127_6274270_1	1297865.APJD01000011_gene6772	1.938e-252	782.0	COG1566@1|root,COG1566@2|Bacteria,1MU7I@1224|Proteobacteria,2TS39@28211|Alphaproteobacteria,3JS4E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Biotin-lipoyl like	-	-	-	ko:K03543	-	M00701	-	-	ko00000,ko00002,ko02000	8.A.1.1	-	-	Biotin_lipoyl_2,HlyD_3,HlyD_D23
SX1_k127_6274270_0	1297865.APJD01000011_gene6771	0.0	1029.0	COG0477@1|root,COG2814@2|Bacteria,1MU1I@1224|Proteobacteria,2TVXT@28211|Alphaproteobacteria,3K6KI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	-	-	-	ko:K03446	-	M00701	-	-	ko00000,ko00002,ko02000	2.A.1.3	-	-	MFS_1
SX1_k127_6274270_4	1297865.APJD01000011_gene6770	4.833e-160	518.0	COG3346@1|root,COG3346@2|Bacteria,1MWWG@1224|Proteobacteria,2U0N5@28211|Alphaproteobacteria,3JT3G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SURF1 family	surf1	-	-	ko:K14998	-	-	-	-	ko00000,ko03029	3.D.4.8	-	-	SURF1
SX1_k127_6274270_7	1297865.APJD01000011_gene6769	6.172e-77	259.0	COG5349@1|root,COG5349@2|Bacteria,1N0WU@1224|Proteobacteria,2UCE7@28211|Alphaproteobacteria,3JYWF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF983)	MA20_19755	-	-	-	-	-	-	-	-	-	-	-	DUF983
SX1_k127_6274270_2	1297865.APJD01000011_gene6768	3.31e-207	646.0	COG1845@1|root,COG1845@2|Bacteria,1MUCK@1224|Proteobacteria,2TQWA@28211|Alphaproteobacteria,3JV28@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	cytochrome c oxidase subunit III	ctaE	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	1.9.3.1	ko:K02276	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.4,3.D.4.6	-	-	COX3
SX1_k127_6274270_5	1297865.APJD01000011_gene6767	3.745e-133	428.0	COG3175@1|root,COG3175@2|Bacteria,1RDTU@1224|Proteobacteria,2U6ZT@28211|Alphaproteobacteria,3JRFV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I	ctaG	-	-	ko:K02258	ko00190,ko01100,ko04714,map00190,map01100,map04714	M00154	-	-	ko00000,ko00001,ko00002,ko03029	3.D.4.8	-	-	CtaG_Cox11
SX1_k127_6274270_8	1230476.C207_03081	7.045e-23	109.0	2EGEY@1|root,33A6Y@2|Bacteria,1N80G@1224|Proteobacteria,2UFIT@28211|Alphaproteobacteria,3K0X9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	coxF	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_6274270_3	1297865.APJD01000011_gene6765	6.124e-191	597.0	COG0109@1|root,COG0109@2|Bacteria,1MW3S@1224|Proteobacteria,2TRD8@28211|Alphaproteobacteria,3JV21@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group	ctaB	GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.5.1.141	ko:K02257	ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714	M00154	R07411	RC01786	ko00000,ko00001,ko00002,ko01000,ko01006,ko03029	-	-	-	UbiA
SX1_k127_6274980_5	1230476.C207_02965	3.37e-139	442.0	COG1376@1|root,COG1376@2|Bacteria,1MVYT@1224|Proteobacteria,2U60K@28211|Alphaproteobacteria,3JRF0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	L,D-transpeptidase catalytic domain	MA20_07410	-	-	-	-	-	-	-	-	-	-	-	YkuD
SX1_k127_6274980_3	1297865.APJD01000007_gene2127	9.468e-189	595.0	COG3921@1|root,COG3921@2|Bacteria,1PZMM@1224|Proteobacteria,2TR6H@28211|Alphaproteobacteria,3JV1V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Extensin-like protein C-terminus	-	-	-	-	-	-	-	-	-	-	-	-	Extensin-like_C
SX1_k127_6274980_0	1297865.APJD01000007_gene2126	0.0	1132.0	COG0318@1|root,COG0318@2|Bacteria,1MUMC@1224|Proteobacteria,2TR96@28211|Alphaproteobacteria,3JTQ8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	alkK	-	6.2.1.44,6.2.1.48	ko:K00666,ko:K02182,ko:K20034	ko00920,map00920	-	R10820	RC00004,RC00014	ko00000,ko00001,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_6274980_4	1297865.APJD01000007_gene2125	1.253e-172	550.0	COG4446@1|root,COG4446@2|Bacteria,1N31A@1224|Proteobacteria,2U0NZ@28211|Alphaproteobacteria,3JU37@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1499)	MA20_07395	-	-	-	-	-	-	-	-	-	-	-	DUF1499
SX1_k127_6274980_2	1297865.APJD01000007_gene2124	3.091e-203	633.0	COG0491@1|root,COG0491@2|Bacteria,1MVC3@1224|Proteobacteria,2TUAZ@28211|Alphaproteobacteria,3JRMU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metallo-beta-lactamase superfamily	MA20_07390	-	3.1.2.6	ko:K01069	ko00620,map00620	-	R01736	RC00004,RC00137	ko00000,ko00001,ko01000	-	-	-	Lactamase_B
SX1_k127_6274980_1	1297865.APJD01000007_gene2123	1.805e-265	818.0	COG1960@1|root,COG1960@2|Bacteria,1MUK0@1224|Proteobacteria,2TSAC@28211|Alphaproteobacteria,3JS55@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, middle domain	gcdH	-	1.3.8.6	ko:K00252	ko00071,ko00310,ko00362,ko00380,ko01100,ko01120,ko01130,map00071,map00310,map00362,map00380,map01100,map01120,map01130	M00032	R02487,R02488,R10074	RC00052,RC00156	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_6274980_6	1297865.APJD01000007_gene2122	4.057e-116	374.0	COG0108@1|root,COG0807@1|root,COG0108@2|Bacteria,COG0807@2|Bacteria,1MU8P@1224|Proteobacteria,2TSMA@28211|Alphaproteobacteria,3JT2I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate	ribB	-	3.5.4.25,4.1.99.12	ko:K14652	ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110	M00125,M00840	R00425,R07281	RC00293,RC01792,RC01815,RC02504	ko00000,ko00001,ko00002,ko01000	-	-	-	DHBP_synthase,GTP_cyclohydro2
SX1_k127_6293224_1	1297865.APJD01000014_gene855	9.732e-103	334.0	COG0596@1|root,COG0596@2|Bacteria,1MW2P@1224|Proteobacteria,2TSS3@28211|Alphaproteobacteria,3JREG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Serine aminopeptidase, S33	MA20_32265	-	1.11.1.10	ko:K00433	-	-	-	-	ko00000,ko01000	-	-	-	Abhydrolase_1
SX1_k127_6293224_0	1297865.APJD01000014_gene856	2.221e-220	686.0	2AS1Y@1|root,31HEF@2|Bacteria,1R2Y6@1224|Proteobacteria,2TRKR@28211|Alphaproteobacteria,3JRN9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_6293224_2	1230476.C207_00545	1.321e-43	160.0	COG4391@1|root,COG4391@2|Bacteria,1MZNK@1224|Proteobacteria,2UD0H@28211|Alphaproteobacteria,3JZEI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Zinc-finger domain	MA20_32275	-	-	-	-	-	-	-	-	-	-	-	zf-CHCC
SX1_k127_6302312_1	1297865.APJD01000006_gene4351	2.055e-189	591.0	COG0111@1|root,COG0111@2|Bacteria,1NU4B@1224|Proteobacteria,2TTQG@28211|Alphaproteobacteria,3JWQI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain	-	-	1.1.1.399,1.1.1.95	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R01513	RC00031	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh,2-Hacid_dh_C
SX1_k127_6302312_2	1297865.APJD01000006_gene4352	1.603e-153	487.0	COG0235@1|root,COG0235@2|Bacteria,1MW7B@1224|Proteobacteria,2U1NG@28211|Alphaproteobacteria,3JUW4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Class II Aldolase and Adducin N-terminal domain	fucA	-	4.1.2.17	ko:K01628	ko00051,ko01120,map00051,map01120	-	R02262	RC00603,RC00604	ko00000,ko00001,ko01000	-	-	-	Aldolase_II
SX1_k127_6302312_0	1297865.APJD01000006_gene4353	0.0	1034.0	COG0578@1|root,COG0578@2|Bacteria,1MUMY@1224|Proteobacteria,2TU11@28211|Alphaproteobacteria,3JTE1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family	eryB	-	1.1.1.402,1.1.5.3	ko:K00111,ko:K21054	ko00564,ko01110,map00564,map01110	-	R00848	RC00029	ko00000,ko00001,ko01000	-	-	-	DAO,DAO_C
SX1_k127_6306114_4	1297865.APJD01000003_gene6455	1.405e-152	482.0	COG0745@1|root,COG2200@1|root,COG0745@2|Bacteria,COG2200@2|Bacteria,1MVK8@1224|Proteobacteria,2TRIW@28211|Alphaproteobacteria,3JSTD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Putative diguanylate phosphodiesterase	-	-	-	-	-	-	-	-	-	-	-	-	EAL
SX1_k127_6306114_3	1297865.APJD01000003_gene6454	3.502e-191	597.0	COG2301@1|root,COG2301@2|Bacteria,1QGFZ@1224|Proteobacteria,2U37X@28211|Alphaproteobacteria,3JU7S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	HpcH/HpaI aldolase/citrate lyase family	-	-	4.1.3.34	ko:K01644	ko02020,map02020	-	R00362	RC00067,RC01118	ko00000,ko00001,ko01000	-	-	-	HpcH_HpaI
SX1_k127_6306114_6	1297865.APJD01000003_gene6453	5.278e-97	323.0	2A6C8@1|root,30V52@2|Bacteria,1R7FP@1224|Proteobacteria,2U1MN@28211|Alphaproteobacteria,3JWQ3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_20980	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_6306114_9	1230476.C207_02580	4.6e-52	187.0	2CADU@1|root,3000A@2|Bacteria,1N2BN@1224|Proteobacteria,2UCG8@28211|Alphaproteobacteria,3K09Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_6306114_1	1230476.C207_02579	3.854e-242	750.0	28NTG@1|root,2ZBS3@2|Bacteria,1N1KZ@1224|Proteobacteria,2TQM9@28211|Alphaproteobacteria,3JSKR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_20990	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_6306114_5	1297865.APJD01000003_gene6450	3.208e-129	413.0	COG1051@1|root,COG1051@2|Bacteria,1MU6H@1224|Proteobacteria,2TU48@28211|Alphaproteobacteria,3JU1J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	NUDIX domain	-	-	-	-	-	-	-	-	-	-	-	-	NUDIX
SX1_k127_6306114_7	1297865.APJD01000003_gene6449	3.132e-86	286.0	COG2050@1|root,COG2050@2|Bacteria,1NA0B@1224|Proteobacteria,2UI6H@28211|Alphaproteobacteria,3JW5D@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Thioesterase superfamily	MA20_21000	-	-	-	-	-	-	-	-	-	-	-	4HBT
SX1_k127_6306114_2	1297865.APJD01000003_gene6448	5.83e-220	698.0	COG0667@1|root,COG0667@2|Bacteria,1MV2Y@1224|Proteobacteria,2TR3G@28211|Alphaproteobacteria,3JQX6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldo/keto reductase family	MA20_21005	-	1.1.1.91	ko:K05882	-	-	-	-	ko00000,ko01000	-	-	-	Aldo_ket_red
SX1_k127_6306114_10	1297865.APJD01000003_gene6447	3.495e-36	138.0	2ANMU@1|root,31DM5@2|Bacteria,1NF8X@1224|Proteobacteria,2UIA8@28211|Alphaproteobacteria,3K100@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_6306114_0	172088.AUGA01000001_gene6424	0.0	1382.0	COG0376@1|root,COG0376@2|Bacteria,1MUBF@1224|Proteobacteria,2TQJ7@28211|Alphaproteobacteria,3JRQT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity	katG	GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748	1.11.1.21	ko:K03782	ko00360,ko00380,ko00940,ko00983,ko01100,ko01110,map00360,map00380,map00940,map00983,map01100,map01110	-	R00602,R00698,R02596,R02670,R03919,R04007,R07443,R11906	RC00034,RC00213,RC00767,RC02141	ko00000,ko00001,ko01000	-	-	-	peroxidase
SX1_k127_6306114_8	469383.Cwoe_2725	2.69e-58	207.0	COG0735@1|root,COG0735@2|Bacteria,2IFBR@201174|Actinobacteria,4CTCG@84995|Rubrobacteria	84995|Rubrobacteria	P	Ferric uptake regulator family	-	-	-	ko:K22297	-	-	-	-	ko00000,ko03000	-	-	-	FUR
SX1_k127_631752_2	1297865.APJD01000033_gene7032	4.731e-93	305.0	COG1702@1|root,COG1702@2|Bacteria,1MVDV@1224|Proteobacteria,2TRV3@28211|Alphaproteobacteria,3JS5Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	PhoH-like protein	phoH	-	-	ko:K06217	-	-	-	-	ko00000	-	-	-	PhoH
SX1_k127_631752_4	521098.Aaci_1983	9.765e-22	102.0	COG0319@1|root,COG0319@2|Bacteria,1V6BU@1239|Firmicutes,4HIIE@91061|Bacilli,279W9@186823|Alicyclobacillaceae	91061|Bacilli	S	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA	ybeY	-	-	ko:K07042	-	-	-	-	ko00000,ko03009	-	-	-	UPF0054
SX1_k127_631752_1	1297865.APJD01000033_gene7034	7.959e-237	735.0	COG1253@1|root,COG1253@2|Bacteria,1MV3P@1224|Proteobacteria,2TVFA@28211|Alphaproteobacteria,3JSH4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Transporter associated domain	tlyC	-	-	ko:K06189	-	-	-	-	ko00000,ko02000	9.A.40.1.2	-	-	CBS,CorC_HlyC
SX1_k127_631752_0	1297865.APJD01000033_gene7035	0.0	1073.0	COG0815@1|root,COG0815@2|Bacteria,1MUBU@1224|Proteobacteria,2TQRC@28211|Alphaproteobacteria,3JQPB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Transfers the fatty acyl group on membrane lipoproteins	lnt	-	-	ko:K03820	-	-	-	-	ko00000,ko01000	-	GT2	-	CN_hydrolase
SX1_k127_631752_3	1230476.C207_02322	1.288e-74	256.0	COG1396@1|root,COG1396@2|Bacteria,1RDBW@1224|Proteobacteria,2U7CY@28211|Alphaproteobacteria,3JY7N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Helix-turn-helix domain	MA20_23890	-	-	-	-	-	-	-	-	-	-	-	HTH_3
SX1_k127_631752_5	398525.KB900701_gene1403	4.633e-19	86.0	COG0624@1|root,COG0624@2|Bacteria,1MUSU@1224|Proteobacteria,2TRTW@28211|Alphaproteobacteria,3JTYP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Peptidase dimerisation domain	-	-	3.4.17.11	ko:K01295	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	M20_dimer,Peptidase_M20,Peptidase_M28
SX1_k127_635451_0	1297865.APJD01000007_gene1886	7.306e-210	654.0	COG3839@1|root,COG3839@2|Bacteria,1MU7W@1224|Proteobacteria,2TQNF@28211|Alphaproteobacteria,3JR55@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ATPases associated with a variety of cellular activities	MA20_44790	-	-	ko:K17325	ko02010,map02010	M00607	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.35	-	-	ABC_tran,TOBE_2
SX1_k127_635451_1	1297865.APJD01000007_gene1887	3.949e-196	612.0	COG1175@1|root,COG1175@2|Bacteria,1MVAZ@1224|Proteobacteria,2TRWF@28211|Alphaproteobacteria,3JUV5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Binding-protein-dependent transport system inner membrane component	MA20_44785	-	-	ko:K17322	ko02010,map02010	M00607	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.35	-	-	BPD_transp_1
SX1_k127_635451_2	1230476.C207_00300	3.433e-171	542.0	COG0395@1|root,COG0395@2|Bacteria,1MVRG@1224|Proteobacteria,2TSEK@28211|Alphaproteobacteria,3JTQH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Binding-protein-dependent transport system inner membrane component	MA20_44780	-	-	ko:K17323	ko02010,map02010	M00607	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.1.35	-	-	BPD_transp_1
SX1_k127_635451_3	1297865.APJD01000007_gene1889	8.765e-55	192.0	COG5477@1|root,COG5477@2|Bacteria,1N7WT@1224|Proteobacteria,2UBTZ@28211|Alphaproteobacteria,3JZHT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Predicted small integral membrane protein (DUF2160)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2160
SX1_k127_641239_3	1297865.APJD01000023_gene1050	1.883e-19	87.0	COG0583@1|root,COG0583@2|Bacteria,1MXR1@1224|Proteobacteria,2TRA1@28211|Alphaproteobacteria,3JSTX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR family	MA20_04505	-	-	ko:K19338	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
SX1_k127_641239_1	1297865.APJD01000023_gene1049	3.551e-119	385.0	COG0028@1|root,COG0028@2|Bacteria,1R6QP@1224|Proteobacteria,2TXAJ@28211|Alphaproteobacteria,3JUDG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain	-	-	-	-	-	-	-	-	-	-	-	-	TPP_enzyme_C
SX1_k127_641239_2	1297865.APJD01000023_gene1048	5.512e-117	378.0	COG4032@1|root,COG4032@2|Bacteria,1P0HU@1224|Proteobacteria,2TRJ2@28211|Alphaproteobacteria,3JQMU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain	-	-	4.1.1.79	ko:K06034	ko00680,ko01120,map00680,map01120	M00358	R05774	RC00506	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_N
SX1_k127_641239_0	1297865.APJD01000023_gene1047	0.0	1203.0	COG2227@1|root,COG2227@2|Bacteria,1QW6H@1224|Proteobacteria,2TRBZ@28211|Alphaproteobacteria,3JT4B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_12,Methyltransf_25,Methyltransf_31,TPR_2,TPR_8
SX1_k127_644585_1	1297865.APJD01000023_gene1171	9.321e-303	932.0	COG5492@1|root,COG5492@2|Bacteria,1R30C@1224|Proteobacteria	1224|Proteobacteria	N	domain, Protein	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_644585_0	1297865.APJD01000023_gene1170	0.0	1279.0	COG0243@1|root,COG0243@2|Bacteria,1NR6J@1224|Proteobacteria,2TSAP@28211|Alphaproteobacteria,3JUM4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family	MA20_34055	-	-	ko:K08351	ko00780,ko01100,map00780,map01100	-	R10127	RC03056	ko00000,ko00001,ko01000,ko02000	5.A.3.4	-	-	Molybdopterin,Molydop_binding
SX1_k127_644684_2	1297865.APJD01000005_gene3491	2.968e-26	107.0	COG3090@1|root,COG3090@2|Bacteria,1PR3S@1224|Proteobacteria,2U0AG@28211|Alphaproteobacteria,3JVM2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Tripartite ATP-independent periplasmic transporters, DctQ component	-	-	-	-	-	-	-	-	-	-	-	-	DctQ
SX1_k127_644684_0	1297865.APJD01000005_gene3492	3.815e-278	857.0	COG1593@1|root,COG1593@2|Bacteria,1MU0F@1224|Proteobacteria,2TQW5@28211|Alphaproteobacteria,3JT73@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Tripartite ATP-independent periplasmic transporter, DctM component	-	-	-	-	-	-	-	-	-	-	-	-	DctM
SX1_k127_644684_1	1297865.APJD01000005_gene3493	4.536e-122	392.0	COG0406@1|root,COG0406@2|Bacteria,1QNKM@1224|Proteobacteria,2TTNR@28211|Alphaproteobacteria,3JVJN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Phosphoglycerate mutase family	-	-	-	ko:K15640	-	-	-	-	ko00000	-	-	-	His_Phos_1
SX1_k127_64761_4	323098.Nwi_1493	1.269e-08	56.0	COG3598@1|root,COG3598@2|Bacteria,1R4GJ@1224|Proteobacteria,2TUNT@28211|Alphaproteobacteria,3K03G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	TOPRIM	-	-	-	-	-	-	-	-	-	-	-	-	AAA_25
SX1_k127_64761_1	452662.SJA_C1-20000	5.29e-101	333.0	2AJHN@1|root,31A47@2|Bacteria,1NVHI@1224|Proteobacteria,2URMA@28211|Alphaproteobacteria,2K5KE@204457|Sphingomonadales	204457|Sphingomonadales	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_64761_2	1320556.AVBP01000003_gene3892	1.371e-70	244.0	COG3905@1|root,COG3905@2|Bacteria,1MXJX@1224|Proteobacteria,2U7AR@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	copG family	-	-	-	-	-	-	-	-	-	-	-	-	RHH_1
SX1_k127_64761_0	1304878.AUGD01000045_gene5348	0.0	1338.0	COG3505@1|root,COG3505@2|Bacteria,1MV1G@1224|Proteobacteria,2TR6N@28211|Alphaproteobacteria,3JRBG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	PFAM TRAG family protein	-	-	-	ko:K03205	ko03070,map03070	M00333	-	-	ko00000,ko00001,ko00002,ko02044	3.A.7	-	-	T4SS-DNA_transf
SX1_k127_64761_3	1304878.AUGD01000030_gene3648	1.512e-46	167.0	COG3843@1|root,COG3843@2|Bacteria,1MU0S@1224|Proteobacteria,2TSP8@28211|Alphaproteobacteria,3JSRJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Protein of unknown function (DUF3363)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3363
SX1_k127_64846_11	1297865.APJD01000046_gene4301	1.532e-43	159.0	COG1028@1|root,COG1028@2|Bacteria,1NZHW@1224|Proteobacteria,2UTDT@28211|Alphaproteobacteria,3K4IW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_64846_6	1304878.AUGD01000037_gene5399	1.006e-83	280.0	COG1846@1|root,COG1846@2|Bacteria	2|Bacteria	K	DNA-binding transcription factor activity	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SX1_k127_64846_12	1297865.APJD01000033_gene6913	1.315e-41	153.0	COG3620@1|root,COG3620@2|Bacteria,1N0SA@1224|Proteobacteria,2UD0K@28211|Alphaproteobacteria,3K0RK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Transcriptional	-	-	-	-	-	-	-	-	-	-	-	-	HTH_3
SX1_k127_64846_8	1304878.AUGD01000039_gene5372	1.309e-53	189.0	2E4AR@1|root,32Z6E@2|Bacteria,1MZRK@1224|Proteobacteria,2UC4U@28211|Alphaproteobacteria,3K5U5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized conserved protein (DUF2285)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2285
SX1_k127_64846_13	1297865.APJD01000059_gene3013	1.011e-12	74.0	2EHBX@1|root,33B3S@2|Bacteria,1NHEE@1224|Proteobacteria,2UKX6@28211|Alphaproteobacteria,3K29A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_64846_4	1304878.AUGD01000039_gene5373	1.046e-116	376.0	COG5419@1|root,COG5419@2|Bacteria,1RJ85@1224|Proteobacteria,2UANH@28211|Alphaproteobacteria,3K5V3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized conserved protein (DUF2285)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2285
SX1_k127_64846_9	1304878.AUGD01000039_gene5374	5.36e-53	187.0	COG3311@1|root,COG3311@2|Bacteria,1RGX4@1224|Proteobacteria,2UBWS@28211|Alphaproteobacteria,3K460@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Helix-turn-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_17
SX1_k127_64846_0	1304878.AUGD01000039_gene5375	8.087e-254	783.0	COG5534@1|root,COG5534@2|Bacteria,1MXQ0@1224|Proteobacteria,2TRBV@28211|Alphaproteobacteria,3JSIT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	PFAM Replication initiator protein A	-	-	-	-	-	-	-	-	-	-	-	-	RPA
SX1_k127_64846_1	1304878.AUGD01000039_gene5376	5.097e-133	427.0	COG1192@1|root,COG1192@2|Bacteria,1MWRE@1224|Proteobacteria,2TSJZ@28211|Alphaproteobacteria,3K2HB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	VirC1 protein	-	-	-	ko:K03496	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	AAA_31
SX1_k127_64846_10	1304878.AUGD01000039_gene5377	2.271e-45	165.0	2E43J@1|root,32YZW@2|Bacteria,1N99M@1224|Proteobacteria,2UH92@28211|Alphaproteobacteria,3JZWY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_64846_5	1304878.AUGD01000039_gene5378	1.356e-108	361.0	2BYDP@1|root,2Z7UG@2|Bacteria,1P8PK@1224|Proteobacteria,2U09C@28211|Alphaproteobacteria,3JXXD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2840)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2840
SX1_k127_64846_3	1304878.AUGD01000039_gene5379	3.861e-120	387.0	COG4959@1|root,COG4959@2|Bacteria,1MV1E@1224|Proteobacteria,2TV10@28211|Alphaproteobacteria,3JYE1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	OU	Signal peptidase, peptidase S26	-	-	-	-	-	-	-	-	-	-	-	-	Peptidase_S26
SX1_k127_64846_7	1304878.AUGD01000039_gene5380	7.852e-83	276.0	COG5489@1|root,COG5489@2|Bacteria,1RJH0@1224|Proteobacteria,2UAK6@28211|Alphaproteobacteria,3K2IM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF736)	-	-	-	-	-	-	-	-	-	-	-	-	DUF736
SX1_k127_64846_2	1304878.AUGD01000039_gene5381	1.031e-127	410.0	COG0741@1|root,COG0741@2|Bacteria,1MZ4X@1224|Proteobacteria,2U313@28211|Alphaproteobacteria,3K3DS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Transglycosylase SLT domain	-	-	-	-	-	-	-	-	-	-	-	-	SLT
SX1_k127_65166_2	1297865.APJD01000005_gene3627	1.253e-227	704.0	COG0346@1|root,COG0346@2|Bacteria,1MUWY@1224|Proteobacteria,2TTMJ@28211|Alphaproteobacteria,3JRYD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	MA20_16260	-	1.13.11.2	ko:K00446	ko00361,ko00362,ko00622,ko00643,ko01100,ko01120,ko01220,map00361,map00362,map00622,map00643,map01100,map01120,map01220	M00569	R00816,R04089,R05295,R05404,R05406,R07795	RC00387,RC00643,RC01075,RC01364,RC01914	br01602,ko00000,ko00001,ko00002,ko01000	-	-	-	Glyoxalase
SX1_k127_65166_3	1297865.APJD01000005_gene3626	3.696e-190	595.0	COG0179@1|root,COG0179@2|Bacteria,1MUPF@1224|Proteobacteria,2TQMB@28211|Alphaproteobacteria,3JSMG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Fumarylacetoacetate (FAA) hydrolase family	MA20_16265	-	-	-	-	-	-	-	-	-	-	-	FAA_hydrolase
SX1_k127_65166_0	1297865.APJD01000005_gene3625	0.0	1098.0	COG0028@1|root,COG0028@2|Bacteria,1MWVW@1224|Proteobacteria,2TTH5@28211|Alphaproteobacteria,3JSVY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Belongs to the TPP enzyme family	ilvB	-	2.2.1.6	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R00006,R00014,R00226,R03050,R04672,R04673,R08648	RC00027,RC00106,RC01192,RC02744,RC02893	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
SX1_k127_65166_1	1297865.APJD01000005_gene3624	1.717e-253	786.0	COG2211@1|root,COG2211@2|Bacteria,1PF5K@1224|Proteobacteria,2TSWN@28211|Alphaproteobacteria,3JW1C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_65166_5	1297865.APJD01000005_gene3623	1.375e-142	452.0	COG3145@1|root,COG3145@2|Bacteria,1N5HB@1224|Proteobacteria,2U5C6@28211|Alphaproteobacteria,3JRGW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	2OG-Fe(II) oxygenase superfamily	alkB	-	1.14.11.33	ko:K03919	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	2OG-FeII_Oxy_2
SX1_k127_65166_4	1297865.APJD01000005_gene3622	5.093e-166	522.0	COG3826@1|root,COG3826@2|Bacteria,1MWVV@1224|Proteobacteria,2TQMH@28211|Alphaproteobacteria,3JQX5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Oxygenase, catalysing oxidative methylation of damaged DNA	MA20_16285	-	-	ko:K09990	-	-	-	-	ko00000	-	-	-	Oxygenase-NA
SX1_k127_651856_1	1297865.APJD01000023_gene1096	6.713e-30	120.0	COG0028@1|root,COG0028@2|Bacteria,1MU6U@1224|Proteobacteria,2TSB1@28211|Alphaproteobacteria,3JS64@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Thiamine pyrophosphate enzyme, central domain	budB	-	2.2.1.6	ko:K01652	ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00570	R00006,R00014,R00226,R03050,R04672,R04673,R08648	RC00027,RC00106,RC01192,RC02744,RC02893	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
SX1_k127_651856_0	1297865.APJD01000023_gene1097	0.0	1691.0	COG0308@1|root,COG0308@2|Bacteria,1MUCI@1224|Proteobacteria,2TRUM@28211|Alphaproteobacteria,3JXAV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Peptidase family M1 domain	-	-	3.4.11.2	ko:K01256	ko00480,ko01100,map00480,map01100	-	R00899,R04951	RC00096,RC00141	ko00000,ko00001,ko01000,ko01002	-	-	-	DUF3458,DUF3458_C,ERAP1_C,Peptidase_M1
SX1_k127_664145_1	1297865.APJD01000007_gene2345	1.025e-201	628.0	COG3386@1|root,COG3386@2|Bacteria,1MXVD@1224|Proteobacteria,2TVCW@28211|Alphaproteobacteria,3JTRB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	SMP-30/Gluconolaconase/LRE-like region	MA20_17040	-	3.1.1.17	ko:K01053,ko:K02352	ko00030,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00030,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220	M00129	R01519,R02933,R03751	RC00537,RC00983	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	SGL
SX1_k127_664145_0	1297865.APJD01000007_gene2346	5.425e-270	832.0	COG0654@1|root,COG0654@2|Bacteria,1MWWT@1224|Proteobacteria,2TRZP@28211|Alphaproteobacteria,3JVCQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	FAD binding domain	-	-	1.14.13.24	ko:K22270	ko00362,ko01120,map00362,map01120	-	R02589	RC00046	ko00000,ko00001,ko01000	-	-	-	FAD_binding_3
SX1_k127_664145_3	1297865.APJD01000007_gene2347	5.977e-106	349.0	COG1846@1|root,COG1846@2|Bacteria,1RI2K@1224|Proteobacteria,2U47M@28211|Alphaproteobacteria,3JW11@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR,MarR_2
SX1_k127_664145_2	1297865.APJD01000007_gene2348	2.26e-194	608.0	COG2159@1|root,COG2159@2|Bacteria,1MXI7@1224|Proteobacteria,2U15G@28211|Alphaproteobacteria,3JVRP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Amidohydrolase	-	-	4.1.1.103,4.1.1.46	ko:K07045,ko:K14333,ko:K15063,ko:K20941	ko00362,ko00627,ko01120,map00362,map00627,map01120	-	R00821,R09278,R11353	RC00390,RC00569	ko00000,ko00001,ko01000	-	-	-	Amidohydro_2
SX1_k127_665286_1	1297865.APJD01000022_gene342	2.554e-172	541.0	COG0579@1|root,COG0579@2|Bacteria,1N0QB@1224|Proteobacteria,2TU6K@28211|Alphaproteobacteria,3JSGV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	FAD dependent oxidoreductase	MA20_03725	-	-	-	-	-	-	-	-	-	-	-	DAO
SX1_k127_665286_5	1297865.APJD01000022_gene341	1.444e-38	144.0	2AGHS@1|root,316QC@2|Bacteria,1NI78@1224|Proteobacteria,2UKZ2@28211|Alphaproteobacteria,3K1UI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_665286_9	1230476.C207_04412	2.17e-09	58.0	COG5481@1|root,COG5481@2|Bacteria,1NG9U@1224|Proteobacteria,2UFXJ@28211|Alphaproteobacteria,3K07E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF465)	MA20_03740	-	-	-	-	-	-	-	-	-	-	-	DUF465
SX1_k127_665286_8	1230476.C207_04412	6.997e-36	136.0	COG5481@1|root,COG5481@2|Bacteria,1NG9U@1224|Proteobacteria,2UFXJ@28211|Alphaproteobacteria,3K07E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF465)	MA20_03740	-	-	-	-	-	-	-	-	-	-	-	DUF465
SX1_k127_665286_6	1297865.APJD01000022_gene339	1.384e-36	139.0	2AC58@1|root,311PK@2|Bacteria,1N24U@1224|Proteobacteria,2UDT1@28211|Alphaproteobacteria,3K01I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_03745	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_665286_4	1297865.APJD01000022_gene338	6.706e-46	168.0	2EHU7@1|root,33BJV@2|Bacteria,1N0GN@1224|Proteobacteria,2UD2K@28211|Alphaproteobacteria,3K01J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_03750	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_665286_2	398525.KB900701_gene322	4.747e-117	381.0	COG2199@1|root,COG2199@2|Bacteria,1Q7FU@1224|Proteobacteria,2TRE7@28211|Alphaproteobacteria,3JTVT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	diguanylate cyclase	-	-	-	-	-	-	-	-	-	-	-	-	GGDEF
SX1_k127_665286_3	1297865.APJD01000022_gene336	2.124e-93	308.0	COG0041@1|root,COG0041@2|Bacteria,1RCWJ@1224|Proteobacteria,2U58D@28211|Alphaproteobacteria,3JU0Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)	purE	-	5.4.99.18	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R07405	RC01947	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRC
SX1_k127_665286_0	1297865.APJD01000022_gene335	4.698e-230	722.0	COG0026@1|root,COG0026@2|Bacteria,1MU70@1224|Proteobacteria,2TRSV@28211|Alphaproteobacteria,3JR4N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)	purK	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	6.3.4.18	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R07404	RC01927	ko00000,ko00001,ko00002,ko01000	-	-	-	ATP-grasp
SX1_k127_665286_7	1297865.APJD01000022_gene334	4.911e-36	136.0	COG0580@1|root,COG0580@2|Bacteria,1MXTJ@1224|Proteobacteria,2TRGG@28211|Alphaproteobacteria,3JQPT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity	aqpZ	-	-	ko:K06188	-	-	-	-	ko00000,ko02000	1.A.8	-	-	MIP
SX1_k127_671408_1	1297865.APJD01000049_gene5508	1.766e-169	533.0	COG0111@1|root,COG0111@2|Bacteria,1MU5Z@1224|Proteobacteria,2TR0F@28211|Alphaproteobacteria,3JV0H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	D-isomer specific 2-hydroxyacid dehydrogenase	serA	-	1.1.1.399,1.1.1.95	ko:K00058	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R01513	RC00031	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh,2-Hacid_dh_C,ACT
SX1_k127_671408_0	443598.AUFA01000008_gene4045	1.074e-183	578.0	COG3618@1|root,COG3618@2|Bacteria,1N2QM@1224|Proteobacteria,2TUVT@28211|Alphaproteobacteria,3JWRX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Amidohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Amidohydro_2
SX1_k127_671408_2	443598.AUFA01000008_gene4044	3.029e-97	319.0	COG1804@1|root,COG1804@2|Bacteria,1MU2K@1224|Proteobacteria,2TR7Q@28211|Alphaproteobacteria,3JTSN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA-transferase family III	-	-	-	-	-	-	-	-	-	-	-	-	CoA_transf_3
SX1_k127_671486_0	1297865.APJD01000005_gene3539	9.66e-295	907.0	COG0683@1|root,COG0683@2|Bacteria,1N0MT@1224|Proteobacteria,2TUMI@28211|Alphaproteobacteria,3JS0N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6,TAT_signal
SX1_k127_671486_4	1297865.APJD01000005_gene3540	2.466e-146	464.0	COG0411@1|root,COG0411@2|Bacteria,1MUFT@1224|Proteobacteria,2U22X@28211|Alphaproteobacteria,3JS0B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ATPases associated with a variety of cellular activities	-	-	-	ko:K01995	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_671486_5	1297865.APJD01000005_gene3541	1.093e-142	457.0	COG0410@1|root,COG0410@2|Bacteria,1MVVC@1224|Proteobacteria,2TSMP@28211|Alphaproteobacteria,3JT67@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ATPases associated with a variety of cellular activities	-	-	-	ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran
SX1_k127_671486_3	1297865.APJD01000005_gene3542	1.15e-166	527.0	COG0559@1|root,COG0559@2|Bacteria,1P3FU@1224|Proteobacteria,2U0D7@28211|Alphaproteobacteria,3JXW9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	-	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_671486_1	1297865.APJD01000005_gene3543	2.076e-214	683.0	COG4177@1|root,COG4177@2|Bacteria,1NY9G@1224|Proteobacteria,2TTSN@28211|Alphaproteobacteria,3JT7P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	-	-	-	ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_671486_7	1230476.C207_02423	1.622e-91	302.0	COG4922@1|root,COG4922@2|Bacteria,1RDM5@1224|Proteobacteria,2UG54@28211|Alphaproteobacteria,3JY4A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SnoaL-like polyketide cyclase	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL,SnoaL_2
SX1_k127_671486_2	1297865.APJD01000005_gene3545	1.633e-197	616.0	COG2267@1|root,COG2267@2|Bacteria,1R41P@1224|Proteobacteria,2TRY2@28211|Alphaproteobacteria,3JSW4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Serine aminopeptidase, S33	MA20_16685	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1,Abhydrolase_4
SX1_k127_671486_8	1297865.APJD01000005_gene3546	5.699e-77	259.0	2DSEU@1|root,33FV9@2|Bacteria,1RG4E@1224|Proteobacteria,2U66H@28211|Alphaproteobacteria,3JYBR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	polyhydroxyalkanoic acid synthase, PhaR subunit	-	-	-	-	-	-	-	-	-	-	-	-	PHA_synth_III_E
SX1_k127_671486_6	1297865.APJD01000005_gene3547	1.68e-141	450.0	COG3243@1|root,COG3243@2|Bacteria,1MU68@1224|Proteobacteria,2VFW2@28211|Alphaproteobacteria,3JTF9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus	MA20_16675	-	-	ko:K03821	ko00650,map00650	-	R04254	RC00004	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1,PhaC_N
SX1_k127_674285_3	1297865.APJD01000011_gene6604	4.123e-239	739.0	COG1149@1|root,COG1149@2|Bacteria,1QTYV@1224|Proteobacteria,2TTH3@28211|Alphaproteobacteria,3JV8K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	TIGRFAM CitB domain protein	tcuB	-	-	ko:K13795	-	-	-	-	ko00000	-	-	-	-
SX1_k127_674285_4	1297865.APJD01000011_gene6605	8.078e-227	713.0	COG0400@1|root,COG0400@2|Bacteria,1NXXX@1224|Proteobacteria,2UW6X@28211|Alphaproteobacteria,3JX5B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Alpha beta hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_674285_1	1297865.APJD01000011_gene6606	2.944e-307	944.0	COG1053@1|root,COG1053@2|Bacteria,1MX5A@1224|Proteobacteria,2TV7T@28211|Alphaproteobacteria,3JQYS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	FAD dependent oxidoreductase	cobZ	-	-	ko:K13796	-	-	-	-	ko00000	-	-	-	FAD_binding_2
SX1_k127_674285_2	1297865.APJD01000011_gene6607	4.057e-282	871.0	COG0477@1|root,COG0477@2|Bacteria,1MU46@1224|Proteobacteria,2TQVP@28211|Alphaproteobacteria,3JU2J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	citA	-	-	ko:K03288	-	-	-	-	ko00000,ko02000	2.A.1.6.1,2.A.1.6.7	-	-	MFS_1,Sugar_tr
SX1_k127_674285_5	172088.AUGA01000001_gene6713	8.013e-187	585.0	COG0583@1|root,COG0583@2|Bacteria,1MWY0@1224|Proteobacteria,2TSD9@28211|Alphaproteobacteria,3JRI1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	MA20_19295	-	-	ko:K03566	ko02026,map02026	-	-	-	ko00000,ko00001,ko03000	-	-	-	HTH_1,LysR_substrate
SX1_k127_674285_9	1297865.APJD01000011_gene6609	1.115e-41	153.0	COG5457@1|root,COG5457@2|Bacteria,1NEF1@1224|Proteobacteria,2UD9T@28211|Alphaproteobacteria,3K0CX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF1127)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1127
SX1_k127_674285_8	1297865.APJD01000011_gene6610	6.788e-128	410.0	COG0454@1|root,COG0456@2|Bacteria,1QAZR@1224|Proteobacteria,2TVHS@28211|Alphaproteobacteria,3JTNT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Acetyltransferase (GNAT) family	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_3
SX1_k127_674285_6	1297865.APJD01000011_gene6611	3.893e-172	541.0	COG1024@1|root,COG1024@2|Bacteria,1MWF6@1224|Proteobacteria,2TTQ1@28211|Alphaproteobacteria,3JT0H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	MA20_19270	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_674285_7	1297865.APJD01000011_gene6612	5.6e-144	460.0	COG1028@1|root,COG1028@2|Bacteria,1MWJQ@1224|Proteobacteria,2TSQ1@28211|Alphaproteobacteria,3JRBU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	MA20_19265	-	-	-	-	-	-	-	-	-	-	-	adh_short,adh_short_C2
SX1_k127_674285_0	1297865.APJD01000011_gene6613	0.0	1161.0	COG1960@1|root,COG1960@2|Bacteria,1MU20@1224|Proteobacteria,2TQU2@28211|Alphaproteobacteria,3JUAT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, middle domain	MA20_19255	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M
SX1_k127_677305_2	1297865.APJD01000011_gene6708	7.569e-66	225.0	COG0346@1|root,COG0346@2|Bacteria,1RCWB@1224|Proteobacteria,2U86C@28211|Alphaproteobacteria,3JYQ8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	SnoaL-like domain	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL_2
SX1_k127_677305_1	1297865.APJD01000011_gene6709	2.64e-194	607.0	COG0583@1|root,COG0583@2|Bacteria,1R8SG@1224|Proteobacteria,2U3PG@28211|Alphaproteobacteria,3JWP2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_677305_0	1297865.APJD01000011_gene6710	5.276e-243	755.0	COG4638@1|root,COG4638@2|Bacteria,1MV2G@1224|Proteobacteria,2TT1V@28211|Alphaproteobacteria,3JUQD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rieske [2Fe-2S] domain	-	-	-	-	-	-	-	-	-	-	-	-	Rieske
SX1_k127_683149_4	1297865.APJD01000014_gene745	4.873e-51	183.0	2ACQC@1|root,312AZ@2|Bacteria,1N3B3@1224|Proteobacteria,2UE70@28211|Alphaproteobacteria,3JZRK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_683149_6	189753.AXAS01000020_gene1693	0.0003521	45.0	2AMRK@1|root,31CMX@2|Bacteria,1NA8C@1224|Proteobacteria,2UH7A@28211|Alphaproteobacteria,3K1BF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_683149_5	1297865.APJD01000014_gene744	1.512e-46	167.0	2A7ZV@1|root,30X02@2|Bacteria,1N2JN@1224|Proteobacteria,2UE8Y@28211|Alphaproteobacteria,3K09Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_683149_2	1297865.APJD01000014_gene743	1.406e-79	265.0	COG0346@1|root,COG0346@2|Bacteria,1RGDW@1224|Proteobacteria,2U7FI@28211|Alphaproteobacteria,3JZ9Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	lactoylglutathione lyase activity	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_683149_3	1297865.APJD01000014_gene742	7.779e-65	222.0	COG0789@1|root,COG0789@2|Bacteria,1Q1D1@1224|Proteobacteria,2V5YU@28211|Alphaproteobacteria,3JZSA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, mercury resistance	-	-	-	-	-	-	-	-	-	-	-	-	MerR_1
SX1_k127_683149_0	1297865.APJD01000014_gene741	2.546e-165	522.0	COG2951@1|root,COG2951@2|Bacteria,1MVY0@1224|Proteobacteria,2TTVI@28211|Alphaproteobacteria,3JTHR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Transglycosylase SLT domain	MA20_26785	-	-	-	-	-	-	-	-	-	-	-	SLT_2
SX1_k127_683149_1	1297865.APJD01000014_gene740	1.197e-85	284.0	2ER0Q@1|root,33IK9@2|Bacteria,1MYWU@1224|Proteobacteria,2UAS3@28211|Alphaproteobacteria,3JZZ5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	T3SS negative regulator,GrlR	-	-	-	-	-	-	-	-	-	-	-	-	GrlR
SX1_k127_683640_6	1297865.APJD01000007_gene1818	1.335e-18	85.0	COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,3JXVZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldehyde dehydrogenase family	-	-	-	-	-	-	-	-	-	-	-	-	Aldedh
SX1_k127_683640_0	1297865.APJD01000007_gene1819	3.704e-311	956.0	COG1906@1|root,COG1906@2|Bacteria,1MXZB@1224|Proteobacteria,2TSPA@28211|Alphaproteobacteria,3JW6I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	membrane	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_683640_1	1297865.APJD01000007_gene1820	2.958e-166	526.0	COG5424@1|root,COG5424@2|Bacteria,1PVPF@1224|Proteobacteria,2U38I@28211|Alphaproteobacteria,3JTYQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Iron-containing redox enzyme	-	-	1.3.3.11	ko:K06137	-	-	-	-	ko00000,ko01000	-	-	-	Haem_oxygenas_2
SX1_k127_683640_2	1297865.APJD01000007_gene1821	7.712e-71	245.0	COG0633@1|root,COG0633@2|Bacteria,1RK28@1224|Proteobacteria,2UEUB@28211|Alphaproteobacteria,3JZ80@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	2Fe-2S iron-sulfur cluster binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Fer2
SX1_k127_683640_4	1297865.APJD01000007_gene1822	8.181e-58	201.0	COG0633@1|root,COG0633@2|Bacteria,1NAHM@1224|Proteobacteria,2UAQX@28211|Alphaproteobacteria,3JZKH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Ferredoxin	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_683640_3	1297865.APJD01000007_gene1823	1.149e-65	231.0	COG2871@1|root,COG2871@2|Bacteria,1QY3P@1224|Proteobacteria,2TZT0@28211|Alphaproteobacteria,3JZH7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	2Fe-2S iron-sulfur cluster binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Fer2
SX1_k127_683640_5	1297865.APJD01000007_gene1824	2.887e-49	178.0	COG1802@1|root,COG1802@2|Bacteria,1R7M7@1224|Proteobacteria,2U8RF@28211|Alphaproteobacteria,3K60K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FCD	-	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SX1_k127_686788_3	1297865.APJD01000014_gene889	1.711e-137	437.0	COG3484@1|root,COG3484@2|Bacteria,1N057@1224|Proteobacteria,2U09K@28211|Alphaproteobacteria,3JRRE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Proteasome-type protease	MA20_32445	-	-	ko:K07395	-	-	-	-	ko00000	-	-	-	Proteasome
SX1_k127_686788_2	1297865.APJD01000014_gene890	3.934e-160	505.0	COG4221@1|root,COG4221@2|Bacteria,1MWXS@1224|Proteobacteria,2TQYY@28211|Alphaproteobacteria,3JSBD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the short-chain dehydrogenases reductases (SDR) family	MA20_32450	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_686788_1	1297865.APJD01000014_gene891	3.997e-239	765.0	COG0477@1|root,COG0477@2|Bacteria,1MXZ3@1224|Proteobacteria,2TWH9@28211|Alphaproteobacteria,3JTH3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Transmembrane secretion effector	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1,MFS_3
SX1_k127_686788_0	1297865.APJD01000014_gene892	1.268e-252	782.0	COG1972@1|root,COG1972@2|Bacteria,1MXXX@1224|Proteobacteria,2TU8A@28211|Alphaproteobacteria,3JUMX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Na+ dependent nucleoside transporter C-terminus	MA20_32460	-	-	ko:K03317	-	-	-	-	ko00000	2.A.41	-	-	Gate,Nucleos_tra2_C,Nucleos_tra2_N
SX1_k127_686788_9	224911.27354970	0.0005693	43.0	COG2897@1|root,COG2897@2|Bacteria,1MW4B@1224|Proteobacteria,2TR9R@28211|Alphaproteobacteria,3JT1H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rhodanese Homology Domain	sseA	-	2.8.1.1,2.8.1.2	ko:K01011	ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122	-	R01931,R03105,R03106	RC00214	ko00000,ko00001,ko01000	-	-	-	Rhodanese
SX1_k127_686788_4	1297865.APJD01000014_gene893	3.071e-110	359.0	COG1917@1|root,COG1917@2|Bacteria,1NNBT@1224|Proteobacteria,2U1PR@28211|Alphaproteobacteria,3JR2X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Cupin 2, conserved barrel domain protein	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
SX1_k127_686788_6	196490.AUEZ01000056_gene1008	5.837e-57	199.0	COG5425@1|root,COG5425@2|Bacteria,1N08I@1224|Proteobacteria,2UBVR@28211|Alphaproteobacteria,3JZGZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Usg-like family	MA20_32470	-	-	-	-	-	-	-	-	-	-	-	Usg
SX1_k127_686788_5	1230476.C207_00582	1.155e-60	209.0	COG0234@1|root,COG0234@2|Bacteria,1MZ2X@1224|Proteobacteria,2U9AQ@28211|Alphaproteobacteria,3JZHN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter	groS	-	-	ko:K04078	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	Cpn10
SX1_k127_686788_7	1297865.APJD01000014_gene896	1.127e-53	190.0	COG0459@1|root,COG0459@2|Bacteria,1MURR@1224|Proteobacteria,2TS07@28211|Alphaproteobacteria,3JTI3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions	groL	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220	-	ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152	-	-	-	ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	-	-	-	Cpn60_TCP1
SX1_k127_692059_2	1297865.APJD01000001_gene5831	1.78e-152	487.0	COG5473@1|root,COG5473@2|Bacteria,1MVRU@1224|Proteobacteria,2TRUD@28211|Alphaproteobacteria,3JT5T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Predicted integral membrane protein (DUF2189)	MA20_41380	-	-	-	-	-	-	-	-	-	-	-	DUF2189
SX1_k127_692059_4	1230476.C207_01480	6.772e-68	234.0	2C8DW@1|root,32RKY@2|Bacteria,1MZUD@1224|Proteobacteria,2UCNB@28211|Alphaproteobacteria,3JZ38@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF3597)	MA20_41375	-	-	-	-	-	-	-	-	-	-	-	DUF3597
SX1_k127_692059_1	1297865.APJD01000001_gene5829	9.765e-168	534.0	COG0179@1|root,COG0179@2|Bacteria,1MVFA@1224|Proteobacteria,2TRTM@28211|Alphaproteobacteria,3JTVN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Fumarylacetoacetate (FAA) hydrolase family	-	-	3.7.1.20	ko:K16165	ko00350,ko01100,ko01120,map00350,map01100,map01120	-	R01085	RC00326,RC00446	ko00000,ko00001,ko01000	-	-	-	FAA_hydrolase
SX1_k127_692059_5	1297865.APJD01000001_gene5828	3.632e-47	185.0	COG2388@1|root,COG2388@2|Bacteria,1N8AQ@1224|Proteobacteria,2UFVS@28211|Alphaproteobacteria,3JZRZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	GCN5-related N-acetyl-transferase	-	-	-	ko:K06975	-	-	-	-	ko00000	-	-	-	Acetyltransf_CG
SX1_k127_692059_3	1297865.APJD01000001_gene5827	2.006e-85	283.0	2DMYT@1|root,32UF9@2|Bacteria,1REV0@1224|Proteobacteria,2U8Z0@28211|Alphaproteobacteria,3K0D4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SPW repeat	-	-	-	-	-	-	-	-	-	-	-	-	SPW
SX1_k127_692059_0	1297865.APJD01000001_gene5826	1.035e-187	600.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JR7R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	MA20_41335	-	-	ko:K00666	-	-	-	-	ko00000,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_692897_23	224911.27348412	3.016e-10	63.0	2978Y@1|root,2ZUGP@2|Bacteria,1RD02@1224|Proteobacteria,2U7VP@28211|Alphaproteobacteria,3JZ2X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_692897_15	1297865.APJD01000006_gene4655	2.316e-145	461.0	COG1309@1|root,COG1309@2|Bacteria,1PAAI@1224|Proteobacteria,2TRN6@28211|Alphaproteobacteria,3JUU1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	WHG domain	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N,WHG
SX1_k127_692897_0	1297865.APJD01000006_gene4656	0.0	1155.0	COG1368@1|root,COG1368@2|Bacteria,1MXT1@1224|Proteobacteria,2TVM8@28211|Alphaproteobacteria,3JRKF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Sulfatase	MA20_02375	-	-	-	-	-	-	-	-	-	-	-	Sulfatase
SX1_k127_692897_3	398525.KB900701_gene6596	4.574e-230	715.0	COG1470@1|root,COG1470@2|Bacteria,1R8IF@1224|Proteobacteria,2U1RT@28211|Alphaproteobacteria,3JWD3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	NPCBM-associated, NEW3 domain of alpha-galactosidase	-	-	-	-	-	-	-	-	-	-	-	-	NPCBM_assoc
SX1_k127_692897_6	1297865.APJD01000006_gene4658	3.575e-196	616.0	COG1131@1|root,COG1131@2|Bacteria,1MUX3@1224|Proteobacteria,2TSI2@28211|Alphaproteobacteria,3JQY0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	AAA domain, putative AbiEii toxin, Type IV TA system	nosF	-	-	ko:K01990,ko:K19340	ko02010,map02010	M00254,M00762	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1,3.A.1.132.2	-	-	ABC_tran
SX1_k127_692897_18	1122222.AXWR01000037_gene290	1.467e-94	321.0	COG1277@1|root,COG1277@2|Bacteria,1WJAA@1297|Deinococcus-Thermus	1297|Deinococcus-Thermus	S	ABC-type transport system involved in multi-copper enzyme maturation permease component	-	-	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane_2
SX1_k127_692897_1	1297865.APJD01000006_gene4660	4e-323	994.0	COG1174@1|root,COG1732@1|root,COG1174@2|Bacteria,COG1732@2|Bacteria,1MXA1@1224|Proteobacteria,2TUNH@28211|Alphaproteobacteria,3JTUK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Substrate binding domain of ABC-type glycine betaine transport system	MA20_02380	-	-	ko:K05845,ko:K05846	ko02010,map02010	M00209	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.12	-	-	BPD_transp_1,OpuAC
SX1_k127_692897_12	1297865.APJD01000006_gene4661	5.216e-164	517.0	COG1125@1|root,COG1125@2|Bacteria,1QTUC@1224|Proteobacteria,2TTMA@28211|Alphaproteobacteria,3JSPY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ABC transporter	yehX	GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0031460,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0072337	-	ko:K05847	ko02010,map02010	M00209	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.12	-	-	ABC_tran,CBS
SX1_k127_692897_22	1230476.C207_03348	5.929e-39	146.0	2AR68@1|root,31GFV@2|Bacteria,1N0QQ@1224|Proteobacteria,2UD4U@28211|Alphaproteobacteria,3K0IJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_692897_10	1230476.C207_03347	2.55e-179	563.0	28IMV@1|root,2Z8NA@2|Bacteria,1R5B6@1224|Proteobacteria,2TRB5@28211|Alphaproteobacteria,3JS02@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metal dependent phosphohydrolases with conserved 'HD' motif.	-	-	-	-	-	-	-	-	-	-	-	-	HD
SX1_k127_692897_17	172088.AUGA01000004_gene3848	3.352e-136	439.0	29ZJ6@1|root,30MJD@2|Bacteria,1MVZH@1224|Proteobacteria,2U2T7@28211|Alphaproteobacteria,3JUHF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_692897_21	1297865.APJD01000006_gene4665	4.447e-54	191.0	2BJHE@1|root,32DUA@2|Bacteria,1N7FR@1224|Proteobacteria,2UF87@28211|Alphaproteobacteria,3K0WV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3551)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3551
SX1_k127_692897_20	1297865.APJD01000006_gene4666	1.177e-54	192.0	2BJHE@1|root,32DUA@2|Bacteria,1N7FR@1224|Proteobacteria,2UF87@28211|Alphaproteobacteria,3K0WV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3551)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3551
SX1_k127_692897_5	1297865.APJD01000006_gene4667	1.732e-199	623.0	COG1893@1|root,COG1893@2|Bacteria,1MX5M@1224|Proteobacteria,2TVRD@28211|Alphaproteobacteria,3K5Z9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid	-	-	-	-	-	-	-	-	-	-	-	-	ApbA,ApbA_C
SX1_k127_692897_11	172088.AUGA01000004_gene3837	2.42e-164	520.0	COG1116@1|root,COG1116@2|Bacteria,1N7FP@1224|Proteobacteria,2TRKZ@28211|Alphaproteobacteria,3JRZ4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ATPases associated with a variety of cellular activities	MA20_02390	-	-	ko:K02049	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	ABC_tran
SX1_k127_692897_13	1297865.APJD01000006_gene4669	3.26e-162	513.0	COG0600@1|root,COG0600@2|Bacteria,1MVD2@1224|Proteobacteria,2TT6U@28211|Alphaproteobacteria,3JVFT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Binding-protein-dependent transport system inner membrane component	MA20_02395	-	-	ko:K02050	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	BPD_transp_1
SX1_k127_692897_9	1297865.APJD01000006_gene4670	6.353e-184	575.0	COG1396@1|root,COG1396@2|Bacteria,1MUG2@1224|Proteobacteria,2TR3R@28211|Alphaproteobacteria,3JVZI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Helix-turn-helix XRE-family like proteins	-	-	-	-	-	-	-	-	-	-	-	-	HTH_31
SX1_k127_692897_7	1297865.APJD01000006_gene4671	3.169e-189	592.0	COG0451@1|root,COG0451@2|Bacteria,1MWYB@1224|Proteobacteria,2TSDE@28211|Alphaproteobacteria,3JSV8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	GM	NmrA-like family	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase
SX1_k127_692897_8	1297865.APJD01000006_gene4672	7.103e-189	604.0	COG0451@1|root,COG0451@2|Bacteria,1MWYB@1224|Proteobacteria,2TSDE@28211|Alphaproteobacteria,3JSV8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	GM	NmrA-like family	-	-	-	-	-	-	-	-	-	-	-	-	Epimerase,NAD_binding_10
SX1_k127_692897_16	1297865.APJD01000006_gene4673	3.307e-141	449.0	COG1028@1|root,COG1028@2|Bacteria,1RBGC@1224|Proteobacteria,2U6FD@28211|Alphaproteobacteria,3JXHW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_692897_2	1297865.APJD01000006_gene4674	2.538e-304	932.0	COG1600@1|root,COG1600@2|Bacteria,1MXS4@1224|Proteobacteria,2U0QU@28211|Alphaproteobacteria,3JWBX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	4Fe-4S binding domain	-	-	-	-	-	-	-	-	-	-	-	-	Fer4,Fer4_16,SCP2
SX1_k127_692897_19	1297865.APJD01000006_gene4675	8.513e-94	308.0	COG0662@1|root,COG0662@2|Bacteria,1RBTN@1224|Proteobacteria,2U098@28211|Alphaproteobacteria,3JWCF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	ARD/ARD' family	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
SX1_k127_692897_4	1297865.APJD01000006_gene4676	2.619e-211	671.0	COG0715@1|root,COG0715@2|Bacteria,1MVZE@1224|Proteobacteria,2TTD4@28211|Alphaproteobacteria,3JW2Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NMT1-like family	MA20_02425	-	-	ko:K02051	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	NMT1,NMT1_2
SX1_k127_692897_14	1297865.APJD01000006_gene4677	5.477e-152	484.0	COG0494@1|root,COG0494@2|Bacteria,1RCHK@1224|Proteobacteria,2U68M@28211|Alphaproteobacteria,3JRCD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	PFAM NUDIX hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_69392_7	1297865.APJD01000006_gene4325	2.257e-69	235.0	COG0477@1|root,COG2814@2|Bacteria,1MX70@1224|Proteobacteria,2U3BI@28211|Alphaproteobacteria,3JXED@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_69392_2	1297865.APJD01000006_gene4326	9.66e-264	812.0	COG0006@1|root,COG0006@2|Bacteria,1MVJK@1224|Proteobacteria,2TVVP@28211|Alphaproteobacteria,3JSAA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Creatinase/Prolidase N-terminal domain	-	-	-	-	-	-	-	-	-	-	-	-	Creatinase_N,Peptidase_M24
SX1_k127_69392_0	1297865.APJD01000006_gene4327	0.0	1020.0	COG1171@1|root,COG1171@2|Bacteria,1MVWJ@1224|Proteobacteria,2TTE1@28211|Alphaproteobacteria,3JVIN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA	ilvA	GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605	4.3.1.19	ko:K01754	ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230	M00570	R00220,R00996	RC00418,RC02600	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP,Thr_dehydrat_C
SX1_k127_69392_1	1297865.APJD01000006_gene4328	2.6e-311	955.0	COG2114@1|root,COG2114@2|Bacteria,1R51D@1224|Proteobacteria,2TT6W@28211|Alphaproteobacteria,3JVJI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Adenylyl- / guanylyl cyclase, catalytic domain	-	-	-	-	-	-	-	-	-	-	-	-	Guanylate_cyc
SX1_k127_69392_4	1297865.APJD01000006_gene4329	2.493e-180	566.0	COG0647@1|root,COG0647@2|Bacteria,1RGTG@1224|Proteobacteria,2VGU6@28211|Alphaproteobacteria	28211|Alphaproteobacteria	G	Haloacid dehalogenase-like hydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_6,Hydrolase_like
SX1_k127_69392_6	1297865.APJD01000006_gene4330	3.333e-145	462.0	COG0235@1|root,COG0235@2|Bacteria,1MW7B@1224|Proteobacteria,2U1NG@28211|Alphaproteobacteria,3JUW4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Class II Aldolase and Adducin N-terminal domain	fucA	-	4.1.2.17	ko:K01628	ko00051,ko01120,map00051,map01120	-	R02262	RC00603,RC00604	ko00000,ko00001,ko01000	-	-	-	Aldolase_II
SX1_k127_69392_5	1297865.APJD01000006_gene4331	4.031e-151	478.0	COG4221@1|root,COG4221@2|Bacteria,1MUF8@1224|Proteobacteria,2TUSA@28211|Alphaproteobacteria,3JW2H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_69392_3	1297865.APJD01000006_gene4332	3.749e-245	757.0	COG0371@1|root,COG0371@2|Bacteria,1NAAM@1224|Proteobacteria,2TRFG@28211|Alphaproteobacteria,3JV91@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Iron-containing alcohol dehydrogenase	egsA	-	1.1.1.261	ko:K00096	ko00564,map00564	-	R05679,R05680	RC00029	ko00000,ko00001,ko01000	-	-	-	Fe-ADH_2
SX1_k127_709330_14	1297865.APJD01000007_gene1810	3.091e-25	107.0	28NMJ@1|root,2ZBN2@2|Bacteria,1NMEG@1224|Proteobacteria,2U0BR@28211|Alphaproteobacteria,3JU07@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2778)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2778
SX1_k127_709330_0	1297865.APJD01000007_gene1809	0.0	1530.0	COG3290@1|root,COG5001@1|root,COG3290@2|Bacteria,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2TV0G@28211|Alphaproteobacteria,3K6XF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Putative diguanylate phosphodiesterase	-	-	-	-	-	-	-	-	-	-	-	-	EAL,GGDEF,PAS_4,PAS_7
SX1_k127_709330_13	1297865.APJD01000007_gene1808	2.892e-90	297.0	COG3805@1|root,COG3805@2|Bacteria,1N2DN@1224|Proteobacteria,2U6WY@28211|Alphaproteobacteria,3JZ4Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Dopa 4,5-dioxygenase family	-	-	-	ko:K10253	-	-	-	-	ko00000,ko01000	-	-	-	DOPA_dioxygen
SX1_k127_709330_12	1297865.APJD01000007_gene1807	7.764e-133	424.0	COG0500@1|root,COG0500@2|Bacteria,1REJ2@1224|Proteobacteria,2U7T5@28211|Alphaproteobacteria,3JV3K@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Nodulation protein S (NodS)	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_25
SX1_k127_709330_10	1297865.APJD01000007_gene1806	8.895e-155	489.0	2A6E4@1|root,30V6Z@2|Bacteria,1R7SV@1224|Proteobacteria,2U50D@28211|Alphaproteobacteria,3JXE2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_709330_8	1297865.APJD01000007_gene1805	9.352e-162	527.0	COG1024@1|root,COG1024@2|Bacteria,1MXBB@1224|Proteobacteria,2TU4V@28211|Alphaproteobacteria,3JRS0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the enoyl-CoA hydratase isomerase family	-	-	4.1.1.41,4.2.1.17	ko:K01692,ko:K11264	ko00071,ko00280,ko00281,ko00310,ko00360,ko00362,ko00380,ko00410,ko00627,ko00640,ko00650,ko00903,ko00930,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00310,map00360,map00362,map00380,map00410,map00627,map00640,map00650,map00903,map00930,map01100,map01110,map01120,map01130,map01212	M00032,M00087	R00923,R03026,R03045,R04137,R04170,R04204,R04224,R04738,R04740,R04744,R04746,R04749,R05595,R06411,R06412,R06942,R08093	RC00097,RC00831,RC00834,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115	ko00000,ko00001,ko00002,ko01000	-	-	-	ECH_1
SX1_k127_709330_9	1297865.APJD01000007_gene1804	1.33e-155	492.0	COG1028@1|root,COG1028@2|Bacteria,1MVQW@1224|Proteobacteria,2TUA2@28211|Alphaproteobacteria,3JUGJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_709330_7	1297865.APJD01000007_gene1803	4.4e-187	595.0	COG2084@1|root,COG2084@2|Bacteria,1MX8V@1224|Proteobacteria,2TVBS@28211|Alphaproteobacteria,3JTCY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Domain of unknown function (DUF1932)	MA20_26655	-	-	-	-	-	-	-	-	-	-	-	DUF1932,NAD_binding_2
SX1_k127_709330_6	1297865.APJD01000007_gene1802	6.229e-193	602.0	COG0715@1|root,COG0715@2|Bacteria,1PKQN@1224|Proteobacteria,2TSRB@28211|Alphaproteobacteria,3JUQJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	4,5-dihydroxyphthalate decarboxylase	MA20_26650	-	-	-	-	-	-	-	-	-	-	-	NMT1
SX1_k127_709330_11	1297865.APJD01000007_gene1801	1.917e-152	482.0	COG1309@1|root,COG1309@2|Bacteria,1RDIM@1224|Proteobacteria,2VEVK@28211|Alphaproteobacteria,3JVBT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	MA20_26620	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_709330_4	1297865.APJD01000007_gene1800	2.985e-203	633.0	COG3386@1|root,COG3386@2|Bacteria,1MWTR@1224|Proteobacteria,2TV5X@28211|Alphaproteobacteria,3JUAY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	SMP-30/Gluconolaconase/LRE-like region	-	-	3.1.1.15	ko:K13874,ko:K22217	ko00053,ko01100,map00053,map01100	-	R02526	RC00537	ko00000,ko00001,ko01000	-	-	-	SGL
SX1_k127_709330_2	1297865.APJD01000007_gene1799	2.658e-234	726.0	COG2017@1|root,COG2017@2|Bacteria,1MVMN@1224|Proteobacteria,2TTJ7@28211|Alphaproteobacteria,3JVAG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Converts alpha-aldose to the beta-anomer	-	-	5.1.3.3	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	M00632	R01602,R10619	RC00563	ko00000,ko00001,ko00002,ko01000	-	-	-	Aldose_epim
SX1_k127_709330_5	1297865.APJD01000007_gene1798	2.2e-199	622.0	COG0673@1|root,COG0673@2|Bacteria,1MW0Q@1224|Proteobacteria,2TQR0@28211|Alphaproteobacteria,3JUR7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Oxidoreductase family, NAD-binding Rossmann fold	-	-	1.1.1.48	ko:K00035	ko00052,ko01100,map00052,map01100	-	R01094,R01097	RC00161	ko00000,ko00001,ko01000	-	-	-	GFO_IDH_MocA
SX1_k127_709330_3	1297865.APJD01000007_gene1797	1.205e-228	708.0	COG0123@1|root,COG0123@2|Bacteria,1MU7P@1224|Proteobacteria,2TRRH@28211|Alphaproteobacteria,3JR8M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	BQ	Histone deacetylase domain	MA20_09840	-	-	-	-	-	-	-	-	-	-	-	Hist_deacetyl
SX1_k127_709330_1	1297865.APJD01000007_gene1796	7.946e-284	874.0	COG2271@1|root,COG2271@2|Bacteria,1MVPS@1224|Proteobacteria,2TTHW@28211|Alphaproteobacteria,3JT33@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	PFAM Major Facilitator Superfamily	gudP	-	-	ko:K03535	-	-	-	-	ko00000,ko02000	2.A.1.14.1	-	-	MFS_1
SX1_k127_709330_15	1230476.C207_00219	4.083e-20	102.0	COG0583@1|root,COG0583@2|Bacteria,1MXRP@1224|Proteobacteria,2TRVK@28211|Alphaproteobacteria,3JU75@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR family	MA20_08235	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_714377_1	1297865.APJD01000005_gene3646	2.246e-20	91.0	COG4303@1|root,COG4303@2|Bacteria,1MUR4@1224|Proteobacteria,2TTNA@28211|Alphaproteobacteria,3JSC5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Ethanolamine ammonia lyase large subunit (EutB)	MA20_16105	-	4.3.1.7	ko:K03735	ko00564,ko01100,map00564,map01100	-	R00749	RC00370	ko00000,ko00001,ko01000	-	-	-	EutB
SX1_k127_714377_0	1297865.APJD01000005_gene3645	3.411e-221	690.0	COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,2TQR7@28211|Alphaproteobacteria,3JTBE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NT	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).	MA20_16110	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	4HB_MCP_1,HAMP,MCPsignal,sCache_2
SX1_k127_719545_4	1038866.KB902801_gene6925	4.85e-27	111.0	COG0546@1|root,COG0546@2|Bacteria,1REXF@1224|Proteobacteria,2VG24@28211|Alphaproteobacteria,3JSJQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	HAD-hyrolase-like	MA20_36165	-	3.1.3.18	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	-	R01334	RC00017	ko00000,ko00001,ko01000	-	-	-	HAD_2
SX1_k127_719545_3	1297865.APJD01000006_gene4484	1.148e-73	252.0	COG5451@1|root,COG5451@2|Bacteria,1MYIV@1224|Proteobacteria,2UGCX@28211|Alphaproteobacteria,3JYYB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2385)	MA20_42075	-	-	-	-	-	-	-	-	-	-	-	DUF2385
SX1_k127_719545_2	1297865.APJD01000006_gene4485	1.053e-77	261.0	COG1051@1|root,COG1051@2|Bacteria,1N1KH@1224|Proteobacteria,2UDI2@28211|Alphaproteobacteria,3JYZ5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Belongs to the Nudix hydrolase family	MA20_42070	-	-	-	-	-	-	-	-	-	-	-	NUDIX
SX1_k127_719545_1	172088.AUGA01000004_gene4034	2.774e-95	313.0	2BNNA@1|root,32HB8@2|Bacteria,1R624@1224|Proteobacteria,2U216@28211|Alphaproteobacteria,3JYFR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_42065	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_719545_0	398525.KB900701_gene6756	4.465e-163	514.0	COG2135@1|root,COG2135@2|Bacteria,1RER4@1224|Proteobacteria,2U0W2@28211|Alphaproteobacteria,3JV7R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the SOS response-associated peptidase family	MA20_42060	-	-	-	-	-	-	-	-	-	-	-	SRAP
SX1_k127_730804_4	1297865.APJD01000007_gene1979	1.787e-185	581.0	COG2072@1|root,COG2072@2|Bacteria,1MU71@1224|Proteobacteria,2TV2E@28211|Alphaproteobacteria,3JQVH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	FMO-like,K_oxygenase,NAD_binding_8,Pyr_redox_2
SX1_k127_730804_5	1297865.APJD01000007_gene1980	2.758e-183	573.0	COG0714@1|root,COG0714@2|Bacteria,1MV5I@1224|Proteobacteria,2TRI8@28211|Alphaproteobacteria,3JS7C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	AAA domain (dynein-related subfamily)	MA20_01295	-	-	-	-	-	-	-	-	-	-	-	AAA,AAA_5
SX1_k127_730804_9	1297865.APJD01000007_gene1981	4.852e-37	140.0	COG2261@1|root,COG2261@2|Bacteria,1N72Y@1224|Proteobacteria,2UFM5@28211|Alphaproteobacteria,3K0CJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Transglycosylase associated protein	MA20_01300	-	-	-	-	-	-	-	-	-	-	-	Transgly_assoc
SX1_k127_730804_0	1297865.APJD01000007_gene1982	0.0	1243.0	COG2199@1|root,COG2202@1|root,COG2202@2|Bacteria,COG3706@2|Bacteria,1R7HC@1224|Proteobacteria,2TU0D@28211|Alphaproteobacteria,3JRER@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Diguanylate cyclase	-	-	-	-	-	-	-	-	-	-	-	-	GGDEF,PAS,PAS_3,PAS_4,PAS_9,dCache_1
SX1_k127_730804_2	1297865.APJD01000007_gene1983	1.842e-261	805.0	COG3825@1|root,COG3825@2|Bacteria,1MUAJ@1224|Proteobacteria,2TS5P@28211|Alphaproteobacteria,3JSTY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	VWA domain containing CoxE-like protein	MA20_01305	-	-	ko:K09989	-	-	-	-	ko00000	-	-	-	VWA_CoxE
SX1_k127_730804_8	1297865.APJD01000007_gene1984	1.663e-87	289.0	COG0607@1|root,COG0607@2|Bacteria,1RHQZ@1224|Proteobacteria,2U9DZ@28211|Alphaproteobacteria,3JY2J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rhodanese Homology Domain	MA20_01310	-	-	-	-	-	-	-	-	-	-	-	Rhodanese
SX1_k127_730804_3	1297865.APJD01000007_gene1985	2.558e-188	588.0	COG2897@1|root,COG2897@2|Bacteria,1MW4B@1224|Proteobacteria,2TR9R@28211|Alphaproteobacteria,3JT1H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rhodanese Homology Domain	sseA	-	2.8.1.1,2.8.1.2	ko:K01011	ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122	-	R01931,R03105,R03106	RC00214	ko00000,ko00001,ko01000	-	-	-	Rhodanese
SX1_k127_730804_6	1297865.APJD01000007_gene1986	1.444e-145	464.0	2A5EB@1|root,30U43@2|Bacteria,1NZMR@1224|Proteobacteria,2TUEH@28211|Alphaproteobacteria,3JS0X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_730804_1	1297865.APJD01000007_gene1987	1.329e-271	838.0	COG1376@1|root,COG1376@2|Bacteria,1MXZM@1224|Proteobacteria,2TSBH@28211|Alphaproteobacteria,3JU61@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	L,D-transpeptidase catalytic domain	MA20_01325	-	-	-	-	-	-	-	-	-	-	-	YkuD
SX1_k127_730804_7	1297865.APJD01000007_gene1988	2.472e-100	327.0	COG4221@1|root,COG4221@2|Bacteria,1PWXN@1224|Proteobacteria,2U2SU@28211|Alphaproteobacteria,3JTFM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF4336)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4336
SX1_k127_734726_3	1297865.APJD01000007_gene1869	2.156e-249	768.0	COG3386@1|root,COG3386@2|Bacteria,1MU0C@1224|Proteobacteria,2TSXG@28211|Alphaproteobacteria,3JTE8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	SMP-30/Gluconolaconase/LRE-like region	MA20_02675	-	3.1.1.17	ko:K01053,ko:K14274	ko00030,ko00040,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00030,map00040,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220	M00129	R01519,R02427,R02933,R03751	RC00537,RC00713,RC00983	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	SGL
SX1_k127_734726_0	1297865.APJD01000007_gene1870	0.0	1544.0	COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TSUW@28211|Alphaproteobacteria,3JU81@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Domain of unknown function (DUF1974)	fadE	-	-	ko:K06445	ko00071,ko01100,ko01212,map00071,map01100,map01212	M00087	R01175,R01279,R03777,R03857,R03990,R04751,R04754	RC00052,RC00076	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N,DUF1974
SX1_k127_734726_2	1297865.APJD01000007_gene1871	1.141e-279	860.0	COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,2TUX3@28211|Alphaproteobacteria,3JRR3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the thiolase family	MA20_44850	-	2.3.1.9	ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177	RC00004,RC00326	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	Thiolase_C,Thiolase_N
SX1_k127_734726_1	1297865.APJD01000007_gene1872	0.0	1400.0	COG1024@1|root,COG1250@1|root,COG1024@2|Bacteria,COG1250@2|Bacteria,1MU9P@1224|Proteobacteria,2TS8E@28211|Alphaproteobacteria,3JSUZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	enoyl-CoA hydratase isomerase	MA20_44845	-	1.1.1.35,4.2.1.17,5.1.2.3,5.3.3.8	ko:K01782,ko:K01825	ko00071,ko00280,ko00281,ko00310,ko00362,ko00380,ko00410,ko00640,ko00650,ko00903,ko00930,ko01040,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00071,map00280,map00281,map00310,map00362,map00380,map00410,map00640,map00650,map00903,map00930,map01040,map01100,map01110,map01120,map01130,map01200,map01212	M00032,M00087	R01975,R03026,R03045,R03276,R04137,R04170,R04203,R04204,R04224,R04737,R04738,R04739,R04740,R04741,R04744,R04745,R04746,R04748,R04749,R04756,R05066,R05305,R06411,R06412,R06941,R06942,R07935,R07951,R08093,R08094	RC00029,RC00099,RC00117,RC00241,RC00525,RC00831,RC00834,RC00896,RC01078,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115	ko00000,ko00001,ko00002,ko01000	-	-	-	3HCDH,3HCDH_N,ECH_1
SX1_k127_734726_8	1297865.APJD01000007_gene1873	2.886e-87	301.0	COG1607@1|root,COG1607@2|Bacteria,1MZAZ@1224|Proteobacteria,2U93J@28211|Alphaproteobacteria,3JY0X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Thioesterase superfamily	yciA	-	-	ko:K10806	ko01040,map01040	-	-	-	ko00000,ko00001,ko01000,ko01004	-	-	-	4HBT
SX1_k127_734726_10	1230476.C207_00293	3.002e-23	100.0	2EQ0D@1|root,33HKU@2|Bacteria,1N7ES@1224|Proteobacteria,2UF3T@28211|Alphaproteobacteria,3K0WY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_44835	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_734726_6	1297865.APJD01000007_gene1874	1.798e-146	466.0	COG0637@1|root,COG0637@2|Bacteria,1PUMZ@1224|Proteobacteria,2U52Q@28211|Alphaproteobacteria,3JRE1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	haloacid dehalogenase-like hydrolase	-	-	3.1.3.18	ko:K01091	ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130	-	R01334	RC00017	ko00000,ko00001,ko01000	-	-	-	HAD_2
SX1_k127_734726_4	398525.KB900701_gene7323	1.361e-161	511.0	COG1349@1|root,COG1349@2|Bacteria,1MUJG@1224|Proteobacteria,2TR8U@28211|Alphaproteobacteria,3JT88@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	DeoR C terminal sensor domain	glpR	-	-	ko:K02444	-	-	-	-	ko00000,ko03000	-	-	-	DeoRC,HTH_DeoR
SX1_k127_734726_7	1297865.APJD01000007_gene1876	6.628e-121	391.0	COG1802@1|root,COG1802@2|Bacteria,1N6IS@1224|Proteobacteria,2UIEI@28211|Alphaproteobacteria,3K609@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FCD	-	-	-	-	-	-	-	-	-	-	-	-	FCD,GntR
SX1_k127_734726_5	1297865.APJD01000007_gene1877	1.077e-156	494.0	COG1011@1|root,COG1011@2|Bacteria,1NYX7@1224|Proteobacteria,2TVNX@28211|Alphaproteobacteria,3JS5G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Haloacid dehalogenase-like hydrolase	-	-	3.8.1.2	ko:K01560	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	-	R05287	RC00697	ko00000,ko00001,ko01000	-	-	-	HAD_2
SX1_k127_734726_9	1297865.APJD01000007_gene1878	6.363e-47	173.0	COG0834@1|root,COG0834@2|Bacteria,1MV5D@1224|Proteobacteria,2TTXX@28211|Alphaproteobacteria,3JZNX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	ET	Bacterial periplasmic substrate-binding proteins	gltI	-	-	ko:K02030,ko:K10001	ko02010,ko02020,map02010,map02020	M00230,M00236	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3,3.A.1.3.19,3.A.1.3.4	-	-	SBP_bac_3
SX1_k127_734799_0	1297865.APJD01000006_gene4401	0.0	1360.0	COG1640@1|root,COG1640@2|Bacteria,1QTVJ@1224|Proteobacteria,2TW4K@28211|Alphaproteobacteria,3JR1W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	4-alpha-glucanotransferase	malQ	-	2.4.1.25,5.4.99.15	ko:K00705,ko:K06044	ko00500,ko01100,ko01110,map00500,map01100,map01110	M00565	R01824,R05196,R09995	RC00049	ko00000,ko00001,ko00002,ko01000	-	GH13,GH77	-	Alpha-amylase,Glyco_hydro_77
SX1_k127_734799_1	1297865.APJD01000006_gene4402	0.0	1254.0	COG3387@1|root,COG3387@2|Bacteria,1MV08@1224|Proteobacteria,2TRMQ@28211|Alphaproteobacteria,3JRQ3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Glycosyl hydrolases family 15	-	-	-	-	-	-	-	-	-	-	-	-	Glyco_hydro_15
SX1_k127_734799_2	1297865.APJD01000006_gene4403	5.526e-175	556.0	COG0561@1|root,COG0561@2|Bacteria,1MXIH@1224|Proteobacteria,2TTNZ@28211|Alphaproteobacteria,3JQTP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sucrose-6F-phosphate phosphohydrolase	-	-	-	-	-	-	-	-	-	-	-	-	Hydrolase_3
SX1_k127_734799_3	1297865.APJD01000006_gene4404	1.476e-75	253.0	COG3265@1|root,COG3265@2|Bacteria,1RHD0@1224|Proteobacteria,2UBQX@28211|Alphaproteobacteria,3JUIV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Shikimate kinase	-	-	2.7.1.12	ko:K00851	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	-	R01737	RC00002,RC00017	ko00000,ko00001,ko01000	-	-	-	AAA_33,SKI
SX1_k127_743066_4	1297865.APJD01000006_gene4354	8.474e-190	593.0	COG0583@1|root,COG0583@2|Bacteria,1MX2A@1224|Proteobacteria,2TV0H@28211|Alphaproteobacteria,3JQXU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	MA20_04270	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_743066_2	1297865.APJD01000006_gene4355	2.621e-225	700.0	COG0687@1|root,COG0687@2|Bacteria,1MWG5@1224|Proteobacteria,2TTP2@28211|Alphaproteobacteria,3JV3Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Bacterial extracellular solute-binding protein	MA20_04265	-	-	ko:K02055	ko02024,map02024	M00193	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.11	-	-	SBP_bac_6,SBP_bac_8
SX1_k127_743066_3	1297865.APJD01000006_gene4356	1.751e-218	679.0	COG3842@1|root,COG3842@2|Bacteria,1MU3I@1224|Proteobacteria,2TQMJ@28211|Alphaproteobacteria,3JRKH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system	MA20_04260	-	-	ko:K02049,ko:K02052	ko02024,map02024	M00188,M00193	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.11,3.A.1.16,3.A.1.17	-	-	ABC_tran,TOBE_2
SX1_k127_743066_5	1297865.APJD01000006_gene4357	1.561e-176	561.0	COG1176@1|root,COG1176@2|Bacteria,1MVFG@1224|Proteobacteria,2TSSR@28211|Alphaproteobacteria,3JQXE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Binding-protein-dependent transport system inner membrane component	MA20_04255	-	-	ko:K02054	ko02024,map02024	M00193	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.11	-	-	BPD_transp_1
SX1_k127_743066_6	1297865.APJD01000006_gene4358	3.764e-162	514.0	COG1177@1|root,COG1177@2|Bacteria,1MWXM@1224|Proteobacteria,2TXYX@28211|Alphaproteobacteria,3JSD3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Binding-protein-dependent transport system inner membrane component	MA20_04250	-	-	ko:K02053	ko02024,map02024	M00193	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.11	-	-	BPD_transp_1
SX1_k127_743066_1	1297865.APJD01000006_gene4359	1.852e-247	768.0	COG0665@1|root,COG0665@2|Bacteria,1MVG3@1224|Proteobacteria,2TRYR@28211|Alphaproteobacteria,3JV5E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	FAD dependent oxidoreductase	MA20_04245	-	-	-	-	-	-	-	-	-	-	-	DAO
SX1_k127_743066_8	1297865.APJD01000006_gene4360	1.379e-56	203.0	COG1034@1|root,COG1034@2|Bacteria,1N72X@1224|Proteobacteria,2UH2S@28211|Alphaproteobacteria,3JZKE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	2Fe-2S iron-sulfur cluster binding domain	MA20_04240	-	-	-	-	-	-	-	-	-	-	-	Fer2_4
SX1_k127_743066_0	1297865.APJD01000006_gene4361	9.075e-294	909.0	COG0446@1|root,COG2906@1|root,COG0446@2|Bacteria,COG2906@2|Bacteria,1MXA9@1224|Proteobacteria,2TVYN@28211|Alphaproteobacteria,3JRFM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	BFD-like [2Fe-2S] binding domain	ooxA	-	-	-	-	-	-	-	-	-	-	-	Fer2_BFD,Pyr_redox_2
SX1_k127_743066_7	1297865.APJD01000006_gene4362	2.232e-72	254.0	COG0665@1|root,COG0665@2|Bacteria,1MXM0@1224|Proteobacteria,2TRR8@28211|Alphaproteobacteria,3JWH9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	FAD dependent oxidoreductase	MA20_04230	-	1.5.3.1	ko:K00303	ko00260,ko01100,map00260,map01100	-	R00610	RC00060,RC00557	ko00000,ko00001,ko01000	-	-	-	DAO
SX1_k127_749593_0	1304878.AUGD01000021_gene3779	2.94e-130	423.0	COG1914@1|root,COG1914@2|Bacteria,1MW6X@1224|Proteobacteria,2TUTC@28211|Alphaproteobacteria,3JX8F@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Natural resistance-associated macrophage protein	mntH	-	-	ko:K03322	-	-	-	-	ko00000,ko02000	2.A.55.2.6,2.A.55.3	-	-	Nramp
SX1_k127_749593_1	1304878.AUGD01000021_gene3778	5.372e-118	382.0	COG1633@1|root,COG1633@2|Bacteria,1MUET@1224|Proteobacteria,2TQMZ@28211|Alphaproteobacteria,3JR4J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Rubrerythrin	-	-	-	-	-	-	-	-	-	-	-	-	Rubrerythrin
SX1_k127_754497_4	1297865.APJD01000036_gene1470	1.108e-91	304.0	2FFRZ@1|root,347P5@2|Bacteria,1NF7E@1224|Proteobacteria,2UHES@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_754497_2	1297865.APJD01000036_gene1469	4.775e-141	448.0	COG0745@1|root,COG0745@2|Bacteria,1N0YI@1224|Proteobacteria,2TSV8@28211|Alphaproteobacteria,3JRE8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Two component transcriptional regulator, winged helix family	ctrA	-	-	ko:K02483	-	-	-	-	ko00000,ko02022	-	-	-	Response_reg,Trans_reg_C
SX1_k127_754497_1	1297865.APJD01000036_gene1468	2.148e-278	866.0	COG0642@1|root,COG0642@2|Bacteria,1MX6R@1224|Proteobacteria,2TS9N@28211|Alphaproteobacteria,3JWKT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Histidine kinase	-	-	-	-	-	-	-	-	-	-	-	-	HATPase_c
SX1_k127_754497_0	1297865.APJD01000036_gene1467	6.427e-303	928.0	COG1520@1|root,COG2010@1|root,COG1520@2|Bacteria,COG2010@2|Bacteria,1PIDE@1224|Proteobacteria,2TTS3@28211|Alphaproteobacteria,3JVPI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	PQQ-like domain	-	-	1.1.2.6	ko:K05889	-	-	R03136	-	ko00000,ko01000	-	-	-	Cytochrome_CBB3,PQQ,PQQ_2,PQQ_3
SX1_k127_757357_0	1297865.APJD01000006_gene4439	2.953e-241	745.0	COG4948@1|root,COG4948@2|Bacteria,1MVFW@1224|Proteobacteria,2TU7R@28211|Alphaproteobacteria,3JSJX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain	MA20_01110	GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0009987,GO:0016043,GO:0016829,GO:0016835,GO:0016836,GO:0022607,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0046872,GO:0047808,GO:0051259,GO:0051260,GO:0065003,GO:0071840	4.2.1.81	ko:K22209	-	-	-	-	ko00000,ko01000	-	-	-	MR_MLE_C,MR_MLE_N
SX1_k127_757357_3	1297865.APJD01000006_gene4440	5.436e-61	211.0	2DGBX@1|root,2ZVCE@2|Bacteria,1RBSZ@1224|Proteobacteria,2U5Z9@28211|Alphaproteobacteria,3JYI7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_757357_2	1297865.APJD01000006_gene4441	1.451e-168	532.0	COG3637@1|root,COG3637@2|Bacteria,1MWEG@1224|Proteobacteria,2TSCB@28211|Alphaproteobacteria,3JTF0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	ko:K16079	-	-	-	-	ko00000,ko02000	1.B.4.2.1	-	-	OMP_b-brl
SX1_k127_757357_1	1297865.APJD01000006_gene4442	9.683e-227	704.0	28HAQ@1|root,2Z7N0@2|Bacteria,1N5R2@1224|Proteobacteria,2TSE5@28211|Alphaproteobacteria,3JWU9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF2157
SX1_k127_757357_4	1297865.APJD01000006_gene4443	3.486e-30	119.0	COG1593@1|root,COG1593@2|Bacteria,1MUQE@1224|Proteobacteria,2TSSE@28211|Alphaproteobacteria,3JR24@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Malonyl-CoA decarboxylase	MA20_01120	-	4.1.1.9	ko:K01578	ko00410,ko00640,ko01100,ko04146,ko04152,map00410,map00640,map01100,map04146,map04152	-	R00233	RC00040	ko00000,ko00001,ko01000	-	-	-	MCD,MCD_N
SX1_k127_760782_4	1297865.APJD01000020_gene49	9.102e-84	280.0	COG3181@1|root,COG3181@2|Bacteria,1MXEX@1224|Proteobacteria,2TTSX@28211|Alphaproteobacteria,3JR0A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter family receptor	MA20_15055	-	-	ko:K07795	ko02020,map02020	-	-	-	ko00000,ko00001,ko02000	2.A.80.1	-	-	TctC
SX1_k127_760782_0	1297865.APJD01000020_gene48	0.0	1497.0	COG4772@1|root,COG4772@2|Bacteria,1MUIH@1224|Proteobacteria,2TRPJ@28211|Alphaproteobacteria,3JRAT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TonB-dependent receptor	-	-	-	ko:K02014	-	-	-	-	ko00000,ko02000	1.B.14	-	-	Plug,TonB_dep_Rec
SX1_k127_760782_5	1230476.C207_04265	9.572e-65	225.0	2CFN6@1|root,2ZE22@2|Bacteria,1N14N@1224|Proteobacteria,2UEHD@28211|Alphaproteobacteria,3K0U4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_760782_1	1297865.APJD01000020_gene46	1.783e-230	714.0	COG2042@1|root,COG3376@2|Bacteria,1MUYH@1224|Proteobacteria,2TRMZ@28211|Alphaproteobacteria,3JUUV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the NiCoT transporter (TC 2.A.52) family	hoxN	-	-	ko:K07241	-	-	-	-	ko00000,ko02000	2.A.52.1	-	-	NicO
SX1_k127_760782_2	1297865.APJD01000020_gene45	1.435e-162	512.0	COG5266@1|root,COG5266@2|Bacteria,1R7XS@1224|Proteobacteria,2UGU8@28211|Alphaproteobacteria,3K34C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Domain of unknown function (DUF4198)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4198
SX1_k127_760782_3	1297865.APJD01000020_gene44	4.077e-99	323.0	COG1629@1|root,COG4771@2|Bacteria,1QV6G@1224|Proteobacteria,2TWBK@28211|Alphaproteobacteria,3K2VJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	TonB dependent receptor	-	-	-	-	-	-	-	-	-	-	-	-	Plug,TonB_dep_Rec
SX1_k127_770523_14	1297865.APJD01000009_gene2848	5.732e-21	100.0	COG4321@1|root,COG4321@2|Bacteria	2|Bacteria	O	Ribbon-helix-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	RHH_4
SX1_k127_770523_7	1297865.APJD01000009_gene2849	7.12e-194	606.0	COG0601@1|root,COG0601@2|Bacteria,1MU8Z@1224|Proteobacteria,2TR0N@28211|Alphaproteobacteria,3JUIB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02033	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
SX1_k127_770523_8	1297865.APJD01000009_gene2850	3.746e-183	576.0	COG1173@1|root,COG1173@2|Bacteria,1MU26@1224|Proteobacteria,2VF5U@28211|Alphaproteobacteria,3JXA1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02034	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1,OppC_N
SX1_k127_770523_2	1297865.APJD01000009_gene2851	0.0	1135.0	COG0747@1|root,COG0747@2|Bacteria,1PFW6@1224|Proteobacteria,2U1GT@28211|Alphaproteobacteria,3JUHW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Peptide ABC transporter substrate-binding protein	-	-	-	ko:K02035	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	SBP_bac_5
SX1_k127_770523_4	1297865.APJD01000009_gene2852	8.235e-218	677.0	COG0444@1|root,COG0444@2|Bacteria,1R4KB@1224|Proteobacteria,2TR0J@28211|Alphaproteobacteria,3JRF7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Oligopeptide/dipeptide transporter, C-terminal region	-	-	-	ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00439	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25	-	-	ABC_tran,oligo_HPY
SX1_k127_770523_5	1297865.APJD01000009_gene2853	8.431e-210	652.0	COG4608@1|root,COG4608@2|Bacteria,1NU4K@1224|Proteobacteria,2TQTV@28211|Alphaproteobacteria,3JVB6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the ABC transporter superfamily	oppF	-	-	ko:K02032,ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25	-	-	ABC_tran,oligo_HPY
SX1_k127_770523_3	1297865.APJD01000009_gene2854	1.094e-266	827.0	COG1309@1|root,COG1309@2|Bacteria,1R7F8@1224|Proteobacteria,2U0DG@28211|Alphaproteobacteria,3JV70@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_770523_13	1297865.APJD01000009_gene2855	3.364e-65	228.0	COG4321@1|root,COG4321@2|Bacteria,1MZP2@1224|Proteobacteria,2UBZU@28211|Alphaproteobacteria,3JZPJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Ribbon-helix-helix domain	-	-	-	-	-	-	-	-	-	-	-	-	RHH_4
SX1_k127_770523_1	1297865.APJD01000009_gene2856	0.0	1186.0	COG0323@1|root,COG0323@2|Bacteria,1MV61@1224|Proteobacteria,2TR2M@28211|Alphaproteobacteria,3JT55@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex	mutL	GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391	-	ko:K03572	ko03430,map03430	-	-	-	ko00000,ko00001,ko03400	-	-	-	DNA_mis_repair,HATPase_c_3,MutL_C
SX1_k127_770523_9	1297865.APJD01000009_gene2857	9.671e-126	403.0	2F765@1|root,32ICW@2|Bacteria,1NRCD@1224|Proteobacteria,2UNS7@28211|Alphaproteobacteria,3K2NY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_770523_10	1297865.APJD01000009_gene2858	3.7e-113	365.0	COG0742@1|root,COG0742@2|Bacteria,1MXKW@1224|Proteobacteria,2U70Y@28211|Alphaproteobacteria,3JR5U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Conserved hypothetical protein 95	rsmD	-	2.1.1.171	ko:K08316	-	-	R07234	RC00003	ko00000,ko01000,ko03009	-	-	-	Cons_hypoth95
SX1_k127_770523_0	1297865.APJD01000009_gene2859	0.0	1345.0	COG1187@1|root,COG1187@2|Bacteria,1MUCE@1224|Proteobacteria,2TQP2@28211|Alphaproteobacteria,3JUYZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the pseudouridine synthase RsuA family	rluB	-	5.4.99.22	ko:K06178	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PseudoU_synth_2,S4
SX1_k127_770523_12	1230476.C207_03500	4.26e-91	302.0	COG0590@1|root,COG0590@2|Bacteria,1RGU0@1224|Proteobacteria,2U77Q@28211|Alphaproteobacteria,3JY4W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	FJ	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)	tadA	-	3.5.4.1,3.5.4.3,3.5.4.33	ko:K01485,ko:K01487,ko:K11991	ko00230,ko00240,ko00330,ko01100,map00230,map00240,map00330,map01100	-	R00974,R01411,R01676,R02922,R10223	RC00074,RC00204,RC00477,RC00514,RC00809	ko00000,ko00001,ko01000,ko03016	-	-	-	MafB19-deam,dCMP_cyt_deam_1
SX1_k127_770523_6	1297865.APJD01000009_gene2861	7.689e-208	646.0	COG0596@1|root,COG0596@2|Bacteria,1MUVB@1224|Proteobacteria,2TREP@28211|Alphaproteobacteria,3JSFP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Alpha/beta hydrolase family	MA20_05720	-	3.8.1.3	ko:K01561	ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120	-	R05287	RC00697	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1
SX1_k127_770523_11	398525.KB900701_gene2709	3.055e-94	312.0	COG1960@1|root,COG1960@2|Bacteria,1MU2V@1224|Proteobacteria,2TSK3@28211|Alphaproteobacteria,3JVKG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	1.3.8.7	ko:K00249	ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320	M00013,M00036,M00087	R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754	RC00052,RC00068,RC00076,RC00095,RC00148,RC00246	ko00000,ko00001,ko00002,ko01000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
SX1_k127_771139_4	1297865.APJD01000020_gene149	4.854e-101	331.0	2A5ND@1|root,30UD4@2|Bacteria,1Q5PE@1224|Proteobacteria,2U0XC@28211|Alphaproteobacteria,3JWKC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_771139_8	398525.KB900701_gene5265	1.782e-26	113.0	2AHSK@1|root,31852@2|Bacteria,1N2JH@1224|Proteobacteria,2UBVY@28211|Alphaproteobacteria,3K07U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_771139_6	1297865.APJD01000020_gene151	5.094e-37	141.0	29D5F@1|root,3003F@2|Bacteria,1N2R6@1224|Proteobacteria,2UBZR@28211|Alphaproteobacteria,3K0RI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_771139_7	1297865.APJD01000020_gene152	3.389e-32	126.0	2BP6F@1|root,311XT@2|Bacteria,1N2IN@1224|Proteobacteria,2UDWZ@28211|Alphaproteobacteria,3K0HA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_771139_1	1297865.APJD01000020_gene153	5.099e-215	672.0	COG1638@1|root,COG1638@2|Bacteria,1R6NX@1224|Proteobacteria,2U0Q1@28211|Alphaproteobacteria,3JVK4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Bacterial extracellular solute-binding protein, family 7	-	-	-	-	-	-	-	-	-	-	-	-	DctP
SX1_k127_771139_2	1297865.APJD01000020_gene154	7.834e-202	629.0	COG0583@1|root,COG0583@2|Bacteria,1R5NZ@1224|Proteobacteria,2U0EF@28211|Alphaproteobacteria,3K2FI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_771139_5	1297865.APJD01000020_gene155	3.917e-62	216.0	COG4319@1|root,COG4319@2|Bacteria,1PIQU@1224|Proteobacteria,2UXCH@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	ketosteroid isomerase	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_771139_0	1297865.APJD01000020_gene156	0.0	1114.0	COG0277@1|root,COG0277@2|Bacteria,1MUPW@1224|Proteobacteria,2TUNK@28211|Alphaproteobacteria,3JWXY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	FAD binding domain	-	-	-	-	-	-	-	-	-	-	-	-	BBE,FAD_binding_4
SX1_k127_771139_9	1230476.C207_00842	2.12e-25	106.0	COG4625@1|root,COG4932@1|root,COG4625@2|Bacteria,COG4932@2|Bacteria,1MU92@1224|Proteobacteria,2TSB7@28211|Alphaproteobacteria,3JUBZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Autotransporter beta-domain	-	-	-	-	-	-	-	-	-	-	-	-	Autotransporter,PATR
SX1_k127_771139_3	1297865.APJD01000020_gene158	3.029e-174	547.0	COG2267@1|root,COG2267@2|Bacteria,1MUG8@1224|Proteobacteria,2TUMX@28211|Alphaproteobacteria,3JTYX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
SX1_k127_771139_10	1297865.APJD01000020_gene159	3.284e-22	95.0	COG2271@1|root,COG2271@2|Bacteria,1MWYR@1224|Proteobacteria,2TSXW@28211|Alphaproteobacteria,3JTZP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Transmembrane secretion effector	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_77623_4	1297865.APJD01000001_gene5930	1.398e-140	450.0	COG2808@1|root,COG2808@2|Bacteria,1N1B9@1224|Proteobacteria,2U5JV@28211|Alphaproteobacteria,3JSF2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Putative FMN-binding domain	paiB	-	-	ko:K07734	-	-	-	-	ko00000,ko03000	-	-	-	FMN_bind_2
SX1_k127_77623_2	398525.KB900701_gene4732	3.062e-216	682.0	COG0002@1|root,COG0002@2|Bacteria,1MVJ6@1224|Proteobacteria,2TRMT@28211|Alphaproteobacteria,3JRRU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde	argC	-	1.2.1.38	ko:K00145	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	M00028,M00845	R03443	RC00684	ko00000,ko00001,ko00002,ko01000	-	-	-	Semialdhyde_dh,Semialdhyde_dhC
SX1_k127_77623_3	1297865.APJD01000001_gene5928	4.489e-210	653.0	COG0002@1|root,COG0002@2|Bacteria,1MVJ6@1224|Proteobacteria,2TRMT@28211|Alphaproteobacteria,3JRRU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde	argC	-	1.2.1.38	ko:K00145	ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230	M00028,M00845	R03443	RC00684	ko00000,ko00001,ko00002,ko01000	-	-	-	Semialdhyde_dh
SX1_k127_77623_5	1297865.APJD01000001_gene5927	4.857e-126	408.0	COG0500@1|root,COG0500@2|Bacteria,1R5D7@1224|Proteobacteria,2UA9F@28211|Alphaproteobacteria,3JY6W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11,Methyltransf_23,Methyltransf_25
SX1_k127_77623_7	1297865.APJD01000001_gene5926	5.167e-79	265.0	COG3686@1|root,COG3686@2|Bacteria,1RAEH@1224|Proteobacteria,2U5JJ@28211|Alphaproteobacteria,3JY5A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	MAPEG family	MA20_30600	-	-	-	-	-	-	-	-	-	-	-	MAPEG
SX1_k127_77623_0	1297865.APJD01000001_gene5925	0.0	1247.0	COG3243@1|root,COG3243@2|Bacteria,1MU68@1224|Proteobacteria,2TR7S@28211|Alphaproteobacteria,3JRU1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus	phbC	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	-	ko:K03821	ko00650,map00650	-	R04254	RC00004	ko00000,ko00001,ko01000	-	-	-	Abhydrolase_1,PhaC_N
SX1_k127_77623_8	1297865.APJD01000001_gene5924	1.663e-46	170.0	2ADU3@1|root,313JS@2|Bacteria,1N74I@1224|Proteobacteria,2UF9R@28211|Alphaproteobacteria,3K18S@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_77623_1	1297865.APJD01000001_gene5923	7.703e-268	826.0	COG0436@1|root,COG0436@2|Bacteria,1MWS8@1224|Proteobacteria,2TRE3@28211|Alphaproteobacteria,3JRSM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Aminotransferase class I and II	aatC	GO:0003674,GO:0003824,GO:0004021,GO:0006082,GO:0006090,GO:0006520,GO:0006522,GO:0006523,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009078,GO:0009079,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019272,GO:0019752,GO:0030632,GO:0032787,GO:0042851,GO:0042852,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046144,GO:0046145,GO:0046394,GO:0046416,GO:0046436,GO:0046437,GO:0047635,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	-	ko:K14261	-	-	-	-	ko00000,ko01000,ko01007	-	-	-	Aminotran_1_2
SX1_k127_77623_6	1297865.APJD01000001_gene5922	5.012e-82	275.0	COG0460@1|root,COG0460@2|Bacteria,1MUDC@1224|Proteobacteria,2TQWS@28211|Alphaproteobacteria,3JTE6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	homoserine dehydrogenase	hom	GO:0003674,GO:0003824,GO:0004412,GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009088,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.1.1.3	ko:K00003	ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230	M00017,M00018	R01773,R01775	RC00087	ko00000,ko00001,ko00002,ko01000	-	-	-	ACT,Homoserine_dh,NAD_binding_3
SX1_k127_783202_2	1297865.APJD01000014_gene967	9.196e-156	491.0	COG0508@1|root,COG0508@2|Bacteria,1NBIZ@1224|Proteobacteria,2TR2F@28211|Alphaproteobacteria,3JUSR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	dehydrogenase complex catalyzes the overall conversion of	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_783202_3	1297865.APJD01000014_gene968	4.311e-128	413.0	COG0522@1|root,COG0522@2|Bacteria,1MW0U@1224|Proteobacteria,2TRQH@28211|Alphaproteobacteria,3JSTB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit	rpsD	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112	-	ko:K02986	ko03010,map03010	M00178,M00179	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S4,S4
SX1_k127_783202_1	1297865.APJD01000014_gene969	6.983e-233	721.0	COG2008@1|root,COG2008@2|Bacteria,1MWCR@1224|Proteobacteria,2TSUA@28211|Alphaproteobacteria,3JSWE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Aldolase	MA20_09165	-	4.1.2.48	ko:K01620	ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230	-	R00751,R06171	RC00312,RC00372	ko00000,ko00001,ko01000	-	-	-	Beta_elim_lyase
SX1_k127_783202_0	1297865.APJD01000014_gene970	3.103e-242	747.0	COG1680@1|root,COG1680@2|Bacteria,1MVPR@1224|Proteobacteria,2TRWZ@28211|Alphaproteobacteria,3JU23@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SX1_k127_783989_5	1297865.APJD01000014_gene982	3.268e-172	541.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JXAF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	MMPL family	-	-	-	ko:K18138,ko:K18307	ko01501,ko01503,ko02024,map01501,map01503,map02024	M00644,M00647,M00699,M00718	-	-	ko00000,ko00001,ko00002,ko01504,ko02000	2.A.6.2,2.A.6.2.20,2.A.6.2.32	-	-	ACR_tran
SX1_k127_783989_2	1297865.APJD01000014_gene981	1.026e-260	811.0	COG1835@1|root,COG1835@2|Bacteria,1MYXY@1224|Proteobacteria,2TVER@28211|Alphaproteobacteria,3JUP9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyltransferase family	MA20_09105	-	-	-	-	-	-	-	-	-	-	-	Acyl_transf_3
SX1_k127_783989_12	398525.KB900701_gene6010	2.699e-21	108.0	COG5487@1|root,COG5487@2|Bacteria,1NGAH@1224|Proteobacteria,2VBTS@28211|Alphaproteobacteria,3K120@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1328)	MA20_09110	-	-	-	-	-	-	-	-	-	-	-	DUF1328
SX1_k127_783989_8	1297865.APJD01000014_gene979	1.192e-74	251.0	COG2343@1|root,COG2343@2|Bacteria,1RHXD@1224|Proteobacteria,2UC5N@28211|Alphaproteobacteria,3JYPZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF427)	MA20_09120	-	-	-	-	-	-	-	-	-	-	-	NTP_transf_9
SX1_k127_783989_10	1230476.C207_00658	6.421e-43	158.0	COG0271@1|root,COG0271@2|Bacteria,1R3MM@1224|Proteobacteria,2UBUW@28211|Alphaproteobacteria,3K02J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Belongs to the BolA IbaG family	MA20_09125	-	-	-	-	-	-	-	-	-	-	-	BolA
SX1_k127_783989_3	1297865.APJD01000014_gene977	1.86e-256	792.0	COG4292@1|root,COG4292@2|Bacteria,1MW5F@1224|Proteobacteria,2TQP4@28211|Alphaproteobacteria,3JQWR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bacterial low temperature requirement A protein (LtrA)	ltrA	-	-	-	-	-	-	-	-	-	-	-	LtrA
SX1_k127_783989_7	1297865.APJD01000014_gene976	4.134e-78	264.0	2E7Y2@1|root,32RX6@2|Bacteria,1R3BP@1224|Proteobacteria,2U005@28211|Alphaproteobacteria	28211|Alphaproteobacteria	S	Domain of unknown function (DUF4345)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4345
SX1_k127_783989_4	1297865.APJD01000014_gene975	8.143e-210	653.0	COG4301@1|root,COG4301@2|Bacteria,1MUCG@1224|Proteobacteria,2TRMH@28211|Alphaproteobacteria,3JRIF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Histidine-specific methyltransferase, SAM-dependent	MA20_09135	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_33
SX1_k127_783989_0	1297865.APJD01000014_gene974	5.024e-286	880.0	COG1262@1|root,COG1262@2|Bacteria,1MUNC@1224|Proteobacteria,2TQXE@28211|Alphaproteobacteria,3JSBE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	DinB superfamily	-	-	-	-	-	-	-	-	-	-	-	-	DinB_2,FGE-sulfatase,Methyltransf_33
SX1_k127_783989_9	398525.KB900701_gene6003	1.102e-67	230.0	COG0278@1|root,COG0278@2|Bacteria,1MZ4V@1224|Proteobacteria,2U9QB@28211|Alphaproteobacteria,3JYW5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Belongs to the glutaredoxin family. Monothiol subfamily	grlA	-	-	ko:K07390	-	-	-	-	ko00000,ko03029,ko03110	-	-	-	Glutaredoxin
SX1_k127_783989_6	1297865.APJD01000014_gene972	1.847e-113	367.0	COG2110@1|root,COG2110@2|Bacteria,1RCWP@1224|Proteobacteria,2U70V@28211|Alphaproteobacteria,3JWAP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Appr-1'-p processing enzyme	-	-	-	-	-	-	-	-	-	-	-	-	Macro
SX1_k127_783989_1	1297865.APJD01000014_gene971	1.889e-273	845.0	COG1680@1|root,COG1680@2|Bacteria,1MVPR@1224|Proteobacteria,2TRWZ@28211|Alphaproteobacteria,3JU23@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SX1_k127_783989_11	1297865.APJD01000014_gene970	4.107e-24	104.0	COG1680@1|root,COG1680@2|Bacteria,1MVPR@1224|Proteobacteria,2TRWZ@28211|Alphaproteobacteria,3JU23@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Beta-lactamase	-	-	-	-	-	-	-	-	-	-	-	-	Beta-lactamase
SX1_k127_791401_9	1297865.APJD01000006_gene4588	1.37e-17	81.0	2CI0R@1|root,2ZBW7@2|Bacteria,1RCTA@1224|Proteobacteria,2TV1Z@28211|Alphaproteobacteria,3JRPU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DUF308
SX1_k127_791401_2	1297865.APJD01000006_gene4589	3.329e-173	547.0	COG4188@1|root,COG4188@2|Bacteria,1R3QC@1224|Proteobacteria,2U2ZH@28211|Alphaproteobacteria,3JW2Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Platelet-activating factor acetylhydrolase, isoform II	-	-	-	-	-	-	-	-	-	-	-	-	Chlorophyllase2
SX1_k127_791401_0	1297865.APJD01000006_gene4590	2.894e-282	870.0	2DBU1@1|root,2ZB3C@2|Bacteria,1NB4B@1224|Proteobacteria,2U0ZG@28211|Alphaproteobacteria,3JV6M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_791401_3	1297865.APJD01000006_gene4591	5.367e-160	509.0	COG1376@1|root,COG1376@2|Bacteria,1MUAB@1224|Proteobacteria,2TTXM@28211|Alphaproteobacteria,3JTW5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	L,D-transpeptidase catalytic domain	MA20_01915	-	-	-	-	-	-	-	-	-	-	-	YkuD
SX1_k127_791401_6	1297865.APJD01000006_gene4592	1.071e-59	210.0	2CC4N@1|root,334N6@2|Bacteria,1RJME@1224|Proteobacteria,2UA33@28211|Alphaproteobacteria,3JZTX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_791401_4	1297865.APJD01000006_gene4593	1.507e-155	494.0	COG0842@1|root,COG0842@2|Bacteria,1MUH1@1224|Proteobacteria,2TQSY@28211|Alphaproteobacteria,3JRRG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	transport, permease protein	yadH	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K01992	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC2_membrane
SX1_k127_791401_1	1297865.APJD01000006_gene4594	2.18e-193	606.0	COG1131@1|root,COG1131@2|Bacteria,1MUW7@1224|Proteobacteria,2TR2Q@28211|Alphaproteobacteria,3JU27@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	ABC transporter	hndI	GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0016020,GO:0044464,GO:0050896,GO:0071944	-	ko:K01990	-	M00254	-	-	ko00000,ko00002,ko02000	3.A.1	-	-	ABC_tran
SX1_k127_791401_7	398525.KB900701_gene6655	1.452e-52	186.0	COG1598@1|root,COG1598@2|Bacteria,1N2X7@1224|Proteobacteria,2UA2Y@28211|Alphaproteobacteria,3K08I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	HicB_like antitoxin of bacterial toxin-antitoxin system	-	-	-	-	-	-	-	-	-	-	-	-	HicB_lk_antitox
SX1_k127_791401_8	1197906.CAJQ02000023_gene2402	3.267e-31	124.0	COG1724@1|root,COG1724@2|Bacteria	2|Bacteria	N	mRNA binding	-	-	-	ko:K07339	-	-	-	-	ko00000,ko01000,ko02048	-	-	-	HicA_toxin
SX1_k127_791401_5	1297865.APJD01000006_gene4595	7.176e-134	427.0	COG2885@1|root,COG2885@2|Bacteria,1MYXS@1224|Proteobacteria,2UBGB@28211|Alphaproteobacteria,3JRY6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	OmpA family	-	-	-	-	-	-	-	-	-	-	-	-	OmpA
SX1_k127_791802_1	1297865.APJD01000014_gene538	3.993e-79	264.0	COG2128@1|root,COG2128@2|Bacteria,1MVWP@1224|Proteobacteria,2TV9H@28211|Alphaproteobacteria,3JUJK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Carboxymuconolactone decarboxylase family	MA20_27265	-	-	-	-	-	-	-	-	-	-	-	CMD
SX1_k127_791802_0	1297865.APJD01000014_gene537	0.0	1223.0	COG2066@1|root,COG2905@1|root,COG2066@2|Bacteria,COG2905@2|Bacteria,1MWB5@1224|Proteobacteria,2TS8X@28211|Alphaproteobacteria,3JSD9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	glutaminase activity	glsA	GO:0003674,GO:0003824,GO:0004359,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006543,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009084,GO:0009987,GO:0016053,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607	3.5.1.2	ko:K01425	ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230	-	R00256,R01579	RC00010,RC02798	ko00000,ko00001,ko01000	-	-	-	Glutaminase,STAS,cNMP_binding
SX1_k127_791802_2	1038860.AXAP01000020_gene5621	4.335e-14	72.0	COG4666@1|root,COG4666@2|Bacteria,1MUNB@1224|Proteobacteria,2TQY9@28211|Alphaproteobacteria,3JT1C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite ATP-independent periplasmic transporter, DctM component	MA20_27280	-	-	-	-	-	-	-	-	-	-	-	DctM
SX1_k127_799363_1	1297865.APJD01000020_gene249	7.528e-228	706.0	COG0504@1|root,COG0504@2|Bacteria,1MUIT@1224|Proteobacteria,2TS4Y@28211|Alphaproteobacteria,3JTRN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates	pyrG	-	6.3.4.2	ko:K01937	ko00240,ko01100,map00240,map01100	M00052	R00571,R00573	RC00010,RC00074	ko00000,ko00001,ko00002,ko01000	-	-	-	CTP_synth_N,GATase
SX1_k127_799363_7	1230476.C207_00923	3.186e-69	236.0	COG1314@1|root,COG1314@2|Bacteria,1N8MF@1224|Proteobacteria,2UCIP@28211|Alphaproteobacteria,3JYS8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Preprotein translocase SecG subunit	secG	-	-	ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	-	-	ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2	-	-	SecG
SX1_k127_799363_5	1297865.APJD01000020_gene247	1.053e-112	366.0	COG1813@1|root,COG1813@2|Bacteria,1QU3A@1224|Proteobacteria,2TVXJ@28211|Alphaproteobacteria,3K6NU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Helix-turn-helix XRE-family like proteins	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2,HTH_3
SX1_k127_799363_6	1297865.APJD01000020_gene246	4.687e-110	356.0	COG0454@1|root,COG0456@2|Bacteria,1RBE6@1224|Proteobacteria,2U9H8@28211|Alphaproteobacteria,3JX99@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Acetyltransferase (GNAT) domain	ttr	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1,Acetyltransf_10
SX1_k127_799363_4	1297865.APJD01000020_gene245	1.26e-157	497.0	COG0149@1|root,COG0149@2|Bacteria,1MWK5@1224|Proteobacteria,2TS6I@28211|Alphaproteobacteria,3JRGS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)	tpiA	GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616	5.3.1.1	ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003	R01015	RC00423	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	TIM
SX1_k127_799363_0	1297865.APJD01000020_gene244	0.0	1192.0	COG0760@1|root,COG0760@2|Bacteria,1MWV0@1224|Proteobacteria,2TRYU@28211|Alphaproteobacteria,3JQRF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Peptidylprolyl isomerase	ppiD	-	5.2.1.8	ko:K01802,ko:K03770	-	-	-	-	ko00000,ko01000,ko03110	-	-	-	Rotamase_2,SurA_N_3
SX1_k127_799363_2	1297865.APJD01000020_gene243	2.333e-206	644.0	COG0547@1|root,COG0547@2|Bacteria,1MUPV@1224|Proteobacteria,2TR8S@28211|Alphaproteobacteria,3JVIJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)	trpD	GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.4.2.18,4.1.3.27	ko:K00766,ko:K13497	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00023	R00985,R00986,R01073	RC00010,RC00440,RC02148,RC02414	ko00000,ko00001,ko00002,ko01000	-	-	-	Glycos_trans_3N,Glycos_transf_3
SX1_k127_799363_3	1297865.APJD01000020_gene242	1.069e-161	513.0	COG0134@1|root,COG0134@2|Bacteria,1MW5K@1224|Proteobacteria,2TSZE@28211|Alphaproteobacteria,3JQR7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the TrpC family	trpC	GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831	4.1.1.48,5.3.1.24	ko:K01609,ko:K13498	ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230	M00023	R03508,R03509	RC00944,RC00945	ko00000,ko00001,ko00002,ko01000	-	-	-	IGPS
SX1_k127_799363_8	1297865.APJD01000020_gene241	1.163e-68	234.0	COG0315@1|root,COG0315@2|Bacteria,1RCYZ@1224|Proteobacteria,2U747@28211|Alphaproteobacteria,3JR9A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)	moaC	-	4.6.1.17	ko:K03637	ko00790,ko01100,ko04122,map00790,map01100,map04122	-	R11372	RC03425	ko00000,ko00001,ko01000	-	-	-	MoaC
SX1_k127_799372_1	1297865.APJD01000001_gene5998	8.936e-159	503.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,3JRBW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	AcrB/AcrD/AcrF family	-	-	-	ko:K07789	ko02020,map02020	M00648	-	-	ko00000,ko00001,ko00002,ko02000	2.A.6.2	-	-	ACR_tran
SX1_k127_799372_0	1297865.APJD01000001_gene5997	7.781e-295	908.0	COG1538@1|root,COG1538@2|Bacteria,1MUA8@1224|Proteobacteria,2TSN8@28211|Alphaproteobacteria,3JQRY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	MU	Outer membrane efflux protein	-	-	-	-	-	-	-	-	-	-	-	-	OEP
SX1_k127_799372_4	1297865.APJD01000001_gene5996	4.335e-56	206.0	293I8@1|root,32HPF@2|Bacteria,1RK13@1224|Proteobacteria,2UBKH@28211|Alphaproteobacteria,3JZYW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_799372_3	1297865.APJD01000001_gene5995	1.012e-67	231.0	2A96K@1|root,30YB8@2|Bacteria,1RIA7@1224|Proteobacteria,2UABI@28211|Alphaproteobacteria,3JZME@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	BA14K
SX1_k127_799372_2	1297865.APJD01000001_gene5994	5.285e-131	417.0	2A5XG@1|root,30UPH@2|Bacteria,1R4CI@1224|Proteobacteria,2TSS2@28211|Alphaproteobacteria,3JVUC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_801388_0	1230476.C207_02972	3.749e-305	941.0	COG0475@1|root,COG1226@1|root,COG0475@2|Bacteria,COG1226@2|Bacteria,1MV34@1224|Proteobacteria,2TRC5@28211|Alphaproteobacteria,3JTZ5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family	MA20_07375	-	-	-	-	-	-	-	-	-	-	-	Na_H_Exchanger,TrkA_N
SX1_k127_801388_3	1230476.C207_02973	2.29e-100	329.0	2D2K4@1|root,32XTX@2|Bacteria,1R38A@1224|Proteobacteria,2U62K@28211|Alphaproteobacteria,3JR4U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3124)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3124
SX1_k127_801388_1	1297865.APJD01000007_gene2119	1.513e-274	845.0	COG1167@1|root,COG1167@2|Bacteria,1MV6F@1224|Proteobacteria,2TR7I@28211|Alphaproteobacteria,3JRS7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EK	Alanine-glyoxylate amino-transferase	MA20_07365	-	-	ko:K00375,ko:K05825	ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210	-	R01939	RC00006	ko00000,ko00001,ko01000,ko03000	-	-	-	Aminotran_1_2,GntR
SX1_k127_801388_2	1297865.APJD01000007_gene2118	1.231e-262	812.0	COG3964@1|root,COG3964@2|Bacteria,1MVC7@1224|Proteobacteria,2TSUD@28211|Alphaproteobacteria,3JSBJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Amidohydrolase family	-	-	3.5.2.3	ko:K01465	ko00240,ko01100,map00240,map01100	M00051	R01993	RC00632	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_1,Amidohydro_3
SX1_k127_801388_4	1297865.APJD01000007_gene2116	2.116e-60	208.0	COG0656@1|root,COG0656@2|Bacteria,1MWFS@1224|Proteobacteria,2TT2Q@28211|Alphaproteobacteria,3JUXB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Aldo/keto reductase family	dkgB	-	1.1.1.346	ko:K06222	-	-	-	-	ko00000,ko01000	-	-	-	Aldo_ket_red
SX1_k127_809157_7	1297865.APJD01000003_gene6307	1.375e-142	452.0	COG0745@1|root,COG0745@2|Bacteria,1MVCB@1224|Proteobacteria,2TR43@28211|Alphaproteobacteria,3JR30@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Two component transcriptional regulator, winged helix family	chvI	GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141	-	ko:K14981	ko02020,map02020	M00520	-	-	ko00000,ko00001,ko00002,ko02022	-	-	-	Response_reg,Trans_reg_C
SX1_k127_809157_6	1297865.APJD01000003_gene6308	1.519e-153	485.0	COG0748@1|root,COG0748@2|Bacteria,1RFVC@1224|Proteobacteria,2TV14@28211|Alphaproteobacteria,3JURX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Pyridoxamine 5'-phosphate oxidase	MA20_19930	-	-	ko:K07226	-	-	-	-	ko00000	-	-	-	DUF2470,Putative_PNPOx,Pyrid_oxidase_2
SX1_k127_809157_0	1230476.C207_02819	0.0	1108.0	COG1866@1|root,COG1866@2|Bacteria,1MWXN@1224|Proteobacteria,2TRC4@28211|Alphaproteobacteria,3JRXU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA	pckA	GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576	4.1.1.49	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	M00003,M00170	R00341	RC00002,RC02741	ko00000,ko00001,ko00002,ko01000	-	-	-	PEPCK_ATP
SX1_k127_809157_2	1297865.APJD01000003_gene6310	5.596e-213	662.0	COG0010@1|root,COG0010@2|Bacteria,1MVFH@1224|Proteobacteria,2TRTG@28211|Alphaproteobacteria,3JQSW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the arginase family	rocF	-	3.5.3.1	ko:K01476	ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146	M00029,M00134	R00551	RC00024,RC00329	ko00000,ko00001,ko00002,ko01000	-	-	-	Arginase
SX1_k127_809157_4	1297865.APJD01000003_gene6311	4.353e-183	572.0	COG2050@1|root,COG2050@2|Bacteria,1N23V@1224|Proteobacteria,2TVHY@28211|Alphaproteobacteria,3JQXW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Thioesterase-like superfamily	MA20_19915	-	-	-	-	-	-	-	-	-	-	-	4HBT_3
SX1_k127_809157_1	1297865.APJD01000003_gene6312	0.0	1090.0	COG0058@1|root,COG0058@2|Bacteria,1MW4J@1224|Proteobacteria,2TRER@28211|Alphaproteobacteria,3JR6I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties	glgP	GO:0000272,GO:0003674,GO:0003824,GO:0004645,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005976,GO:0005977,GO:0005980,GO:0006073,GO:0006091,GO:0006112,GO:0008144,GO:0008150,GO:0008152,GO:0008184,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0015980,GO:0016052,GO:0016740,GO:0016757,GO:0016758,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0055114,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901575	2.4.1.1	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	-	R02111	-	ko00000,ko00001,ko01000	-	GT35	-	Phosphorylase
SX1_k127_809157_3	1230476.C207_02816	2.92e-193	603.0	COG0058@1|root,COG0058@2|Bacteria,1MW4J@1224|Proteobacteria,2TRER@28211|Alphaproteobacteria,3JR6I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties	glgP	GO:0000272,GO:0003674,GO:0003824,GO:0004645,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005976,GO:0005977,GO:0005980,GO:0006073,GO:0006091,GO:0006112,GO:0008144,GO:0008150,GO:0008152,GO:0008184,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0015980,GO:0016052,GO:0016740,GO:0016757,GO:0016758,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0055114,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901575	2.4.1.1	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931	-	R02111	-	ko00000,ko00001,ko01000	-	GT35	-	Phosphorylase
SX1_k127_809157_12	1297865.APJD01000003_gene6313	1.303e-37	143.0	2A6TC@1|root,30VMM@2|Bacteria,1N1QS@1224|Proteobacteria,2UCRY@28211|Alphaproteobacteria,3K09H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_809157_11	1297865.APJD01000003_gene6314	1.333e-57	201.0	COG2827@1|root,COG2827@2|Bacteria,1MZME@1224|Proteobacteria,2UCNX@28211|Alphaproteobacteria,3K0PV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	GIY-YIG type nucleases (URI domain)	-	-	-	ko:K07461	-	-	-	-	ko00000	-	-	-	GIY-YIG
SX1_k127_809157_9	1297865.APJD01000003_gene6315	1.033e-89	296.0	2A6U3@1|root,30VNB@2|Bacteria,1RAND@1224|Proteobacteria,2U5HZ@28211|Alphaproteobacteria,3JY4G@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_22040	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_809157_5	1297865.APJD01000003_gene6316	2.273e-164	519.0	2CKRE@1|root,34B8T@2|Bacteria,1MX6I@1224|Proteobacteria,2TSDC@28211|Alphaproteobacteria,3JUEU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF2865)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2865
SX1_k127_809157_8	1297865.APJD01000003_gene6317	1.1e-110	364.0	COG0461@1|root,COG0461@2|Bacteria,1MVP7@1224|Proteobacteria,2TTSB@28211|Alphaproteobacteria,3JRPV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)	pyrE	-	2.4.2.10	ko:K00762	ko00240,ko01100,map00240,map01100	M00051	R01870	RC00611	ko00000,ko00001,ko00002,ko01000	-	-	-	Pribosyltran
SX1_k127_809157_10	1297865.APJD01000003_gene6318	1.306e-88	292.0	COG0625@1|root,COG0625@2|Bacteria,1MUN3@1224|Proteobacteria,2TTVR@28211|Alphaproteobacteria,3JV74@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, C-terminal domain	MA20_22025	-	-	ko:K11209	-	-	-	-	ko00000,ko01000	-	-	-	GST_C,GST_C_2,GST_N,GST_N_3
SX1_k127_812437_0	1230476.C207_02352	1.53e-160	507.0	COG1024@1|root,COG1024@2|Bacteria,1PJ4R@1224|Proteobacteria,2TSSU@28211|Alphaproteobacteria,3JTWK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Belongs to the enoyl-CoA hydratase isomerase family	MA20_16345	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_812437_1	1297865.APJD01000005_gene3607	3.902e-148	469.0	COG1028@1|root,COG1028@2|Bacteria,1PFUB@1224|Proteobacteria,2U149@28211|Alphaproteobacteria,3JTNK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	MA20_16350	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_813272_0	1297865.APJD01000023_gene1076	0.0	1954.0	COG0506@1|root,COG4230@1|root,COG0506@2|Bacteria,COG4230@2|Bacteria,1MV93@1224|Proteobacteria,2TQPT@28211|Alphaproteobacteria,3JRB4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Oxidizes proline to glutamate for use as a carbon and nitrogen source	putA	-	1.2.1.88,1.5.5.2	ko:K13821	ko00250,ko00330,ko01100,ko01110,ko01130,map00250,map00330,map01100,map01110,map01130	-	R00245,R00707,R00708,R01253,R04444,R04445,R05051	RC00080,RC00083,RC00216,RC00242,RC00255	ko00000,ko00001,ko01000,ko03000	-	-	-	Aldedh,Pro_dh,Pro_dh-DNA_bdg
SX1_k127_813272_8	398525.KB900701_gene7089	3.573e-94	309.0	COG1522@1|root,COG1522@2|Bacteria,1MX7R@1224|Proteobacteria,2U7B2@28211|Alphaproteobacteria,3JRDD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix ASNC type	lrp	-	-	ko:K03719	-	-	-	-	ko00000,ko03000,ko03036	-	-	-	AsnC_trans_reg,HTH_24,HTH_AsnC-type
SX1_k127_813272_7	1297865.APJD01000023_gene1074	3.807e-131	419.0	2CDCV@1|root,308Y1@2|Bacteria,1N74F@1224|Proteobacteria,2TUJ4@28211|Alphaproteobacteria,3JRWU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_813272_6	1297865.APJD01000023_gene1073	8.892e-157	498.0	COG0500@1|root,COG2226@2|Bacteria,1R92P@1224|Proteobacteria,2VEX9@28211|Alphaproteobacteria,3JWE4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Methyltransferase domain	-	-	-	-	-	-	-	-	-	-	-	-	Methyltransf_11
SX1_k127_813272_12	1230476.C207_05412	1.455e-32	138.0	COG1278@1|root,COG1278@2|Bacteria,1N6Q5@1224|Proteobacteria,2UF6W@28211|Alphaproteobacteria,3K06Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	'Cold-shock' DNA-binding domain	-	-	-	ko:K03704	-	-	-	-	ko00000,ko03000	-	-	-	CSD
SX1_k127_813272_10	1297865.APJD01000023_gene1072	5.315e-61	212.0	COG2010@1|root,COG2010@2|Bacteria,1NC9D@1224|Proteobacteria,2UGP9@28211|Alphaproteobacteria,3JZM8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome c	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_813272_4	1297865.APJD01000023_gene1071	4.82e-263	811.0	COG2041@1|root,COG2041@2|Bacteria,1MX9E@1224|Proteobacteria,2TRK0@28211|Alphaproteobacteria,3JRNN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Mo-co oxidoreductase dimerisation domain	MA20_04585	-	-	-	-	-	-	-	-	-	-	-	Mo-co_dimer,Oxidored_molyb
SX1_k127_813272_11	1297865.APJD01000023_gene1070	1.046e-60	210.0	2ADBI@1|root,3010W@2|Bacteria,1N5TH@1224|Proteobacteria,2UDR5@28211|Alphaproteobacteria,3K0BC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_813272_1	1297865.APJD01000023_gene1069	0.0	1165.0	COG0633@1|root,COG2114@1|root,COG0633@2|Bacteria,COG2114@2|Bacteria,1N5XC@1224|Proteobacteria,2TRGX@28211|Alphaproteobacteria,3JQU2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CT	Adenylyl- / guanylyl cyclase, catalytic domain	cyaA	-	4.6.1.1	ko:K01768	ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213	M00695	R00089,R00434	RC00295	ko00000,ko00001,ko00002,ko01000	-	-	-	Fer2,Guanylate_cyc
SX1_k127_813272_2	1297865.APJD01000023_gene1068	0.0	1085.0	COG1807@1|root,COG1807@2|Bacteria,1P6JE@1224|Proteobacteria,2TV39@28211|Alphaproteobacteria,3JRJ0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Dolichyl-phosphate-mannose-protein mannosyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	PMT_2
SX1_k127_813272_5	1297865.APJD01000023_gene1067	1.366e-208	650.0	COG3768@1|root,COG3768@2|Bacteria,1MU8S@1224|Proteobacteria,2TU53@28211|Alphaproteobacteria,3JU0C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF697)	MA20_04555	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K08990	-	-	-	-	ko00000	-	-	-	DUF697
SX1_k127_813272_3	1297865.APJD01000023_gene1066	2.436e-318	975.0	COG3106@1|root,COG3106@2|Bacteria,1MX6E@1224|Proteobacteria,2TR9Y@28211|Alphaproteobacteria,3JRX3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	YcjX-like family, DUF463	MA20_04550	-	-	ko:K06918	-	-	-	-	ko00000	-	-	-	DUF463
SX1_k127_813272_9	1297865.APJD01000023_gene1065	1.307e-72	246.0	COG1272@1|root,COG1272@2|Bacteria,1PGRH@1224|Proteobacteria,2TSXY@28211|Alphaproteobacteria,3JU4N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Haemolysin-III related	-	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	ko:K11068	-	-	-	-	ko00000,ko02042	-	-	-	HlyIII
SX1_k127_814541_1	1297865.APJD01000016_gene3398	1.233e-263	812.0	COG1804@1|root,COG1804@2|Bacteria,1MU2K@1224|Proteobacteria,2TR7Q@28211|Alphaproteobacteria,3JT4Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA-transferase family III	MA20_43260	-	2.8.3.16	ko:K07749	-	-	-	-	ko00000,ko01000	-	-	-	CoA_transf_3
SX1_k127_814541_0	1297865.APJD01000016_gene3399	1.377e-317	980.0	COG2244@1|root,COG2244@2|Bacteria,1R5GK@1224|Proteobacteria,2U37N@28211|Alphaproteobacteria,3JWJ4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Polysaccharide biosynthesis protein	-	-	-	-	-	-	-	-	-	-	-	-	Polysacc_synt,Polysacc_synt_3,Polysacc_synt_C
SX1_k127_814541_2	1297865.APJD01000016_gene3400	1.3e-127	420.0	COG0367@1|root,COG0367@2|Bacteria,1MW4E@1224|Proteobacteria,2TSCY@28211|Alphaproteobacteria,3JS0Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110	-	R00578	RC00010	ko00000,ko00001,ko01000,ko01002	-	-	-	Asn_synthase,GATase_7
SX1_k127_815687_5	1297865.APJD01000028_gene5196	5.658e-92	301.0	COG0016@1|root,COG0016@2|Bacteria,1MVD7@1224|Proteobacteria,2TS2T@28211|Alphaproteobacteria,3JTB6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily	pheS	GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.20	ko:K01889	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	Phe_tRNA-synt_N,tRNA-synt_2d
SX1_k127_815687_6	1297865.APJD01000028_gene5195	1.085e-88	293.0	COG4405@1|root,COG4405@2|Bacteria,1N2T4@1224|Proteobacteria,2U5Q9@28211|Alphaproteobacteria,3JZ6C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	ASCH	-	-	-	-	-	-	-	-	-	-	-	-	ASCH
SX1_k127_815687_0	1297865.APJD01000028_gene5194	0.0	1612.0	COG0072@1|root,COG0073@1|root,COG0072@2|Bacteria,COG0073@2|Bacteria,1MWKS@1224|Proteobacteria,2TQV8@28211|Alphaproteobacteria,3JUGP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily	pheT	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494	6.1.1.20	ko:K01890	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016	-	-	-	B3_4,B5,FDX-ACB,tRNA_bind
SX1_k127_815687_4	1297865.APJD01000028_gene5193	2.021e-159	503.0	COG0730@1|root,COG0730@2|Bacteria,1NAFA@1224|Proteobacteria,2U1B5@28211|Alphaproteobacteria,3JQPV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sulfite exporter TauE/SafE	MA20_24460	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
SX1_k127_815687_2	1297865.APJD01000028_gene5192	6.844e-207	644.0	COG1234@1|root,COG1234@2|Bacteria,1R64Z@1224|Proteobacteria,2TU6T@28211|Alphaproteobacteria,3JX4C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Beta-lactamase superfamily domain	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B_2
SX1_k127_815687_1	1297865.APJD01000028_gene5191	1.351e-291	898.0	COG1231@1|root,COG1231@2|Bacteria,1MXYC@1224|Proteobacteria,2TVDF@28211|Alphaproteobacteria,3JUJ6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Flavin containing amine oxidoreductase	-	-	-	-	-	-	-	-	-	-	-	-	Amino_oxidase
SX1_k127_815687_3	1297865.APJD01000028_gene5190	2.658e-193	603.0	28JXP@1|root,2Z9N4@2|Bacteria,1MXG4@1224|Proteobacteria,2TSXI@28211|Alphaproteobacteria,3JSBT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family	MA20_24470	-	-	-	-	-	-	-	-	-	-	-	Peptidase_C92
SX1_k127_815687_7	1297865.APJD01000028_gene5189	2.014e-15	77.0	COG1807@1|root,COG1807@2|Bacteria,1QIUU@1224|Proteobacteria,2TWT1@28211|Alphaproteobacteria,3JTS7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Dolichyl-phosphate-mannose-protein mannosyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	PMT_2
SX1_k127_817142_4	1297865.APJD01000003_gene6353	7.45e-99	323.0	COG0174@1|root,COG0174@2|Bacteria,1MU6V@1224|Proteobacteria,2VG5K@28211|Alphaproteobacteria,3JTG6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the glutamine synthetase family	MA20_22530	-	6.3.1.2	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727	-	R00253	RC00010,RC02798	ko00000,ko00001,ko01000,ko04147	-	-	-	Gln-synt_C,Gln-synt_N_2
SX1_k127_817142_1	1297865.APJD01000003_gene6354	1.601e-317	971.0	COG4638@1|root,COG4638@2|Bacteria,1MX47@1224|Proteobacteria,2TV03@28211|Alphaproteobacteria,3JV2C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rieske [2Fe-2S] domain	MA20_22525	-	-	-	-	-	-	-	-	-	-	-	Aromatic_hydrox,Rieske
SX1_k127_817142_3	1297865.APJD01000003_gene6355	7.344e-161	508.0	COG1414@1|root,COG1414@2|Bacteria,1QYTM@1224|Proteobacteria,2U04P@28211|Alphaproteobacteria,3JQQZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix isocitrate lyase regulation	pcaR	-	-	ko:K02624,ko:K20539	ko02024,map02024	-	-	-	ko00000,ko00001,ko03000	-	-	-	HTH_IclR,IclR
SX1_k127_817142_2	1297865.APJD01000003_gene6356	2.537e-173	574.0	COG0703@1|root,COG1476@1|root,COG0703@2|Bacteria,COG1476@2|Bacteria,1MX66@1224|Proteobacteria,2TQWU@28211|Alphaproteobacteria,3JUIK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EK	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate	aroK	-	-	ko:K15546	-	-	-	-	ko00000,ko03000	-	-	-	HTH_3,HTH_31,SKI
SX1_k127_817142_0	1297865.APJD01000003_gene6357	0.0	1026.0	COG0365@1|root,COG0365@2|Bacteria,1MUF5@1224|Proteobacteria,2TR3P@28211|Alphaproteobacteria,3JQQ5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	benzoate-CoA ligase	MA20_22485	-	6.2.1.25,6.2.1.27	ko:K04105	ko00362,ko00627,ko01100,ko01120,ko01220,map00362,map00627,map01100,map01120,map01220	-	R01300,R01422	RC00004,RC00174	ko00000,ko00001,ko01000	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_817175_4	1297865.APJD01000007_gene2274	5.294e-117	376.0	COG4608@1|root,COG4608@2|Bacteria,1NU4K@1224|Proteobacteria,2TQTV@28211|Alphaproteobacteria,3JW8P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Oligopeptide/dipeptide transporter, C-terminal region	-	-	-	ko:K02032	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	ABC_tran,oligo_HPY
SX1_k127_817175_0	1297865.APJD01000007_gene2275	0.0	1018.0	COG0747@1|root,COG0747@2|Bacteria,1MUZH@1224|Proteobacteria,2TR1D@28211|Alphaproteobacteria,3JS99@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Bacterial extracellular solute-binding proteins, family 5 Middle	-	-	-	ko:K02033,ko:K02035,ko:K13889	ko02010,ko02024,map02010,map02024	M00239,M00348	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.11	-	-	SBP_bac_5
SX1_k127_817175_2	1297865.APJD01000007_gene2276	2.982e-188	591.0	COG0601@1|root,COG0601@2|Bacteria,1MU8Z@1224|Proteobacteria,2TRH6@28211|Alphaproteobacteria,3JTA2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02033	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
SX1_k127_817175_3	1297865.APJD01000007_gene2277	1.343e-173	563.0	COG1173@1|root,COG1173@2|Bacteria,1MW3R@1224|Proteobacteria,2TUCW@28211|Alphaproteobacteria,3K6EA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	N-terminal TM domain of oligopeptide transport permease C	-	-	-	ko:K02034	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1,OppC_N
SX1_k127_817175_1	1297865.APJD01000007_gene2278	1.546e-248	770.0	COG0439@1|root,COG4799@1|root,COG0439@2|Bacteria,COG4799@2|Bacteria,1MU4H@1224|Proteobacteria,2TWYZ@28211|Alphaproteobacteria,3JUPC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Biotin carboxylase C-terminal domain	MA20_04765	-	-	-	-	-	-	-	-	-	-	-	Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2,Carboxyl_trans
SX1_k127_823624_2	1230476.C207_02490	7.665e-182	572.0	COG0834@1|root,COG0834@2|Bacteria,1NS2X@1224|Proteobacteria,2TUE9@28211|Alphaproteobacteria,3JUBN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	ET	Bacterial periplasmic substrate-binding proteins	-	-	-	ko:K02030	-	M00236	-	-	ko00000,ko00002,ko02000	3.A.1.3	-	-	SBP_bac_3
SX1_k127_823624_4	1297865.APJD01000007_gene2361	2.654e-137	437.0	COG0765@1|root,COG0765@2|Bacteria,1MX3E@1224|Proteobacteria,2U2RK@28211|Alphaproteobacteria,3JUD6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02029,ko:K10002	ko02010,ko02020,map02010,map02020	M00230,M00236	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.3,3.A.1.3.19,3.A.1.3.4	-	-	BPD_transp_1
SX1_k127_823624_3	1297865.APJD01000007_gene2360	7.008e-148	470.0	COG1028@1|root,COG1028@2|Bacteria,1RCKA@1224|Proteobacteria,2U6QJ@28211|Alphaproteobacteria,3JSW0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Enoyl-(Acyl carrier protein) reductase	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_823624_1	1297865.APJD01000007_gene2359	2.812e-234	726.0	COG1063@1|root,COG1063@2|Bacteria,1MV9A@1224|Proteobacteria,2TTZZ@28211|Alphaproteobacteria,3JVH5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Alcohol dehydrogenase GroES-like domain	MA20_17025	-	-	-	-	-	-	-	-	-	-	-	ADH_N,ADH_zinc_N
SX1_k127_823624_0	1297865.APJD01000007_gene2358	0.0	1503.0	COG3210@1|root,COG4625@1|root,COG3210@2|Bacteria,COG4625@2|Bacteria,1MU92@1224|Proteobacteria,2TSB7@28211|Alphaproteobacteria,3JUBZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Autotransporter beta-domain	-	-	-	-	-	-	-	-	-	-	-	-	Autotransporter,PATR
SX1_k127_824899_4	1297865.APJD01000023_gene1062	6.034e-13	68.0	COG2368@1|root,COG2368@2|Bacteria,1PEQG@1224|Proteobacteria,2TVQ7@28211|Alphaproteobacteria,3JTKU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	4-hydroxyphenylacetate 3-hydroxylase C terminal	-	-	4.2.1.120,5.3.3.3	ko:K14534	ko00650,ko00720,ko01100,ko01120,ko01200,map00650,map00720,map01100,map01120,map01200	M00374,M00375	R03031,R10782	RC01857,RC03277	ko00000,ko00001,ko00002,ko01000	-	-	-	HpaB,HpaB_N
SX1_k127_824899_5	335659.S23_10200	0.0003059	46.0	COG2852@1|root,COG2852@2|Bacteria,1N0QU@1224|Proteobacteria,2UFZ7@28211|Alphaproteobacteria,3JYGV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF559)	-	-	-	-	-	-	-	-	-	-	-	-	DUF559
SX1_k127_824899_0	1297865.APJD01000023_gene1061	0.0	1071.0	COG0028@1|root,COG0028@2|Bacteria,1MX6Q@1224|Proteobacteria,2TS3K@28211|Alphaproteobacteria,3JTQX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EH	Belongs to the TPP enzyme family	MA20_04525	-	4.1.1.7	ko:K01576	ko00627,ko01120,map00627,map01120	-	R01764,R02672	RC00595	ko00000,ko00001,ko01000	-	-	-	TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
SX1_k127_824899_3	1297865.APJD01000023_gene1060	3.163e-77	262.0	COG1942@1|root,COG1942@2|Bacteria,1RHA5@1224|Proteobacteria,2U5U5@28211|Alphaproteobacteria,3K5T6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tautomerase enzyme	-	-	-	-	-	-	-	-	-	-	-	-	Tautomerase_2
SX1_k127_824899_2	1297865.APJD01000023_gene1059	4.6e-98	327.0	COG1733@1|root,COG1733@2|Bacteria,1RA78@1224|Proteobacteria,2U6TK@28211|Alphaproteobacteria,3JYNW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	HxlR-like helix-turn-helix	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
SX1_k127_824899_1	1297865.APJD01000023_gene1058	6.657e-101	341.0	COG0346@1|root,COG0346@2|Bacteria,1MV4D@1224|Proteobacteria,2U0JF@28211|Alphaproteobacteria,3JVP2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	glyoxalase bleomycin resistance protein dioxygenase	-	-	-	-	-	-	-	-	-	-	-	-	Glyoxalase
SX1_k127_837020_1	1297865.APJD01000005_gene3947	1.574e-158	500.0	COG0402@1|root,COG0402@2|Bacteria,1MUFE@1224|Proteobacteria,2TR3A@28211|Alphaproteobacteria,3JRSG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Amidohydrolase family	hutF	-	3.5.3.13	ko:K05603	ko00340,map00340	-	R02286	RC00682	ko00000,ko00001,ko01000	-	-	-	Amidohydro_1
SX1_k127_837020_3	1297865.APJD01000005_gene3946	3.85e-156	500.0	COG2188@1|root,COG2188@2|Bacteria,1MVFM@1224|Proteobacteria,2U5HC@28211|Alphaproteobacteria,3JWEM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	UTRA	MA20_34195	-	-	ko:K05836	-	-	-	-	ko00000,ko03000	-	-	-	GntR,UTRA
SX1_k127_837020_0	1297865.APJD01000005_gene3945	2.071e-202	631.0	COG0715@1|root,COG0715@2|Bacteria,1MVJA@1224|Proteobacteria,2TTB8@28211|Alphaproteobacteria,3JVA6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	NMT1-like family	MA20_34190	-	-	ko:K02051	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	NMT1,NMT1_2
SX1_k127_837020_2	1297865.APJD01000005_gene3944	6.85e-157	499.0	COG0600@1|root,COG0600@2|Bacteria,1MWDJ@1224|Proteobacteria,2TRDG@28211|Alphaproteobacteria,3JRXD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Binding-protein-dependent transport system inner membrane component	MA20_34185	-	-	ko:K02050	-	M00188	-	-	ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17	-	-	BPD_transp_1
SX1_k127_837020_4	1297865.APJD01000005_gene3943	8.848e-80	277.0	COG1116@1|root,COG1116@2|Bacteria,1MUDV@1224|Proteobacteria,2TSH9@28211|Alphaproteobacteria,3JQW2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	ABC transporter	MA20_34180	-	-	ko:K02049,ko:K15555	ko00920,ko02010,map00920,map02010	M00188,M00436	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.16,3.A.1.17,3.A.1.17.2	-	-	ABC_tran
SX1_k127_841358_1	1297865.APJD01000020_gene272	7.874e-178	557.0	COG0498@1|root,COG0498@2|Bacteria,1R7X1@1224|Proteobacteria,2TUR3@28211|Alphaproteobacteria,3JU0E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Pyridoxal-phosphate dependent enzyme	MA20_41710	-	4.2.3.1	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	M00018	R01466,R05086	RC00017,RC00526	ko00000,ko00001,ko00002,ko01000	-	-	-	PALP
SX1_k127_841358_0	1297865.APJD01000020_gene273	5.934e-207	645.0	COG3181@1|root,COG3181@2|Bacteria,1MW18@1224|Proteobacteria,2TSKY@28211|Alphaproteobacteria,3JSS0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter family receptor	MA20_41705	-	-	-	-	-	-	-	-	-	-	-	TctC
SX1_k127_841358_2	1297865.APJD01000020_gene275	1.412e-83	277.0	COG0457@1|root,COG0741@1|root,COG0457@2|Bacteria,COG0741@2|Bacteria,1MV3F@1224|Proteobacteria,2TRDB@28211|Alphaproteobacteria,3JUG1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Transglycosylase SLT domain	slt	-	-	ko:K08309	-	-	-	-	ko00000,ko01000,ko01011	-	GH23	-	SLT
SX1_k127_847178_1	1297865.APJD01000009_gene2957	5.96e-197	614.0	COG0583@1|root,COG0583@2|Bacteria,1MW16@1224|Proteobacteria,2TRIG@28211|Alphaproteobacteria,3JR80@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009889,GO:0009987,GO:0010212,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2000112,GO:2001141	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_847178_0	398525.KB900701_gene2624	7.078e-219	688.0	COG1566@1|root,COG1566@2|Bacteria,1MU7I@1224|Proteobacteria,2TS39@28211|Alphaproteobacteria,3JS4E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Biotin-lipoyl like	MA20_06145	-	-	ko:K03543	-	M00701	-	-	ko00000,ko00002,ko02000	8.A.1.1	-	-	Biotin_lipoyl_2,HlyD_D23
SX1_k127_84978_1	1297865.APJD01000010_gene4997	8.602e-270	837.0	COG1167@1|root,COG1167@2|Bacteria,1MVGT@1224|Proteobacteria,2TRK7@28211|Alphaproteobacteria,3JUC3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Aminotransferase class I and II	-	-	-	ko:K00375	-	-	-	-	ko00000,ko03000	-	-	-	Aminotran_1_2,GntR
SX1_k127_84978_10	1297865.APJD01000010_gene4998	5.637e-129	415.0	COG3467@1|root,COG3467@2|Bacteria,1N4RH@1224|Proteobacteria	1224|Proteobacteria	S	PFAM Pyridoxamine 5'-phosphate oxidase-related	-	-	-	ko:K07005	-	-	-	-	ko00000	-	-	-	Pyridox_ox_2
SX1_k127_84978_11	1297865.APJD01000010_gene4999	9.98e-124	397.0	COG5388@1|root,COG5388@2|Bacteria,1MY02@1224|Proteobacteria,2U114@28211|Alphaproteobacteria,3JWNF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PAS domain	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_84978_9	1297865.APJD01000010_gene5000	1.044e-132	424.0	COG5388@1|root,COG5388@2|Bacteria,1MY02@1224|Proteobacteria,2U114@28211|Alphaproteobacteria,3JWNF@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	PAS domain	-	-	-	-	-	-	-	-	-	-	-	-	PAS_5
SX1_k127_84978_6	1297865.APJD01000010_gene5001	9.823e-165	519.0	COG0411@1|root,COG0411@2|Bacteria,1MX51@1224|Proteobacteria,2TTCE@28211|Alphaproteobacteria,3JR62@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ABC transporter	MA20_27850	-	-	ko:K01995	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran,BCA_ABC_TP_C
SX1_k127_84978_7	1038860.AXAP01000036_gene3351	1.942e-136	437.0	COG0410@1|root,COG0410@2|Bacteria,1MUR3@1224|Proteobacteria,2TSWQ@28211|Alphaproteobacteria,3JT2Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	ATPases associated with a variety of cellular activities	MA20_27855	-	-	ko:K01996	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	ABC_tran
SX1_k127_84978_2	1297865.APJD01000010_gene5003	2.921e-265	819.0	COG0683@1|root,COG0683@2|Bacteria,1MUCB@1224|Proteobacteria,2TRWV@28211|Alphaproteobacteria,3JS24@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Periplasmic binding protein domain	-	-	-	ko:K01999	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	Peripla_BP_6
SX1_k127_84978_5	1297865.APJD01000010_gene5004	9.01e-177	556.0	COG0559@1|root,COG0559@2|Bacteria,1MY1E@1224|Proteobacteria,2TSIQ@28211|Alphaproteobacteria,3JTUY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	MA20_27865	-	-	ko:K01997	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_84978_4	1297865.APJD01000010_gene5005	1.629e-200	625.0	COG4177@1|root,COG4177@2|Bacteria,1MWP3@1224|Proteobacteria,2TR99@28211|Alphaproteobacteria,3JURB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Belongs to the binding-protein-dependent transport system permease family	MA20_27870	-	-	ko:K01998	ko02010,ko02024,map02010,map02024	M00237	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.4	-	-	BPD_transp_2
SX1_k127_84978_8	1297865.APJD01000010_gene5006	8.143e-134	426.0	COG1392@1|root,COG1392@2|Bacteria,1R4SP@1224|Proteobacteria,2U5E0@28211|Alphaproteobacteria,3JRFS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Protein of unknown function DUF47	MA20_27875	-	-	ko:K07220	-	-	-	-	ko00000	-	-	-	NUDIX,PhoU_div
SX1_k127_84978_3	1297865.APJD01000010_gene5007	8.407e-203	634.0	COG0306@1|root,COG0306@2|Bacteria,1MVXK@1224|Proteobacteria,2TSYI@28211|Alphaproteobacteria,3JS65@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Phosphate transporter family	pit	-	-	ko:K03306	-	-	-	-	ko00000	2.A.20	-	-	PHO4
SX1_k127_84978_13	224911.27352803	6.868e-07	51.0	COG1173@1|root,COG1173@2|Bacteria,1MWP1@1224|Proteobacteria,2TSUG@28211|Alphaproteobacteria,3JR90@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EP	Binding-protein-dependent transport system inner membrane component	MA20_13270	-	-	ko:K02034	ko02024,map02024	M00239	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.5	-	-	BPD_transp_1
SX1_k127_84978_12	1297865.APJD01000010_gene5008	2.515e-54	192.0	COG2076@1|root,COG2076@2|Bacteria,1MZ6P@1224|Proteobacteria,2UBR4@28211|Alphaproteobacteria,3JZDI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	PFAM small multidrug resistance protein	sugE	-	-	ko:K11741	-	-	-	-	ko00000,ko02000	2.A.7.1	-	-	Multi_Drug_Res
SX1_k127_84978_0	1230476.C207_05480	0.0	1106.0	COG4108@1|root,COG4108@2|Bacteria,1MU7X@1224|Proteobacteria,2TRP5@28211|Alphaproteobacteria,3JRKD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP	prfC	-	-	ko:K02837	-	-	-	-	ko00000,ko03012	-	-	-	GTP_EFTU,GTP_EFTU_D2,RF3_C
SX1_k127_850226_15	1230476.C207_06211	6.903e-18	83.0	COG2166@1|root,COG2166@2|Bacteria,1RI8F@1224|Proteobacteria,2U9A2@28211|Alphaproteobacteria,3JY1C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Fe-S metabolism associated domain	sufE	-	-	ko:K02426	-	-	-	-	ko00000	-	-	-	SufE
SX1_k127_850226_12	1297865.APJD01000005_gene3728	2.232e-70	250.0	2E4C7@1|root,32Z7R@2|Bacteria,1RBPI@1224|Proteobacteria,2U5ZQ@28211|Alphaproteobacteria,3JY81@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Family of unknown function (DUF5330)	-	-	-	-	-	-	-	-	-	-	-	-	DUF5330
SX1_k127_850226_1	1297865.APJD01000005_gene3729	0.0	1137.0	COG0642@1|root,COG2205@2|Bacteria,1NRP8@1224|Proteobacteria,2TSRP@28211|Alphaproteobacteria,3JSU6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	His Kinase A (phosphoacceptor) domain	divJ	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	2.7.13.3	ko:K07716,ko:K11357	ko02020,ko04112,map02020,map04112	M00511	-	-	ko00000,ko00001,ko00002,ko01000,ko01001,ko02022	-	-	-	HATPase_c,HisKA,PAS,PAS_3,PAS_4
SX1_k127_850226_7	1297865.APJD01000005_gene3730	6.097e-143	455.0	COG3409@1|root,COG3409@2|Bacteria,1NFKG@1224|Proteobacteria,2UI0E@28211|Alphaproteobacteria,3JVIT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Putative peptidoglycan binding domain	-	-	-	-	-	-	-	-	-	-	-	-	PG_binding_1
SX1_k127_850226_2	1297865.APJD01000005_gene3731	0.0	1102.0	COG0666@1|root,COG0666@2|Bacteria,1P877@1224|Proteobacteria,2U33E@28211|Alphaproteobacteria,3JTQB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	ankyrin repeats	-	-	-	-	-	-	-	-	-	-	-	-	Ank,Ank_2
SX1_k127_850226_11	1297865.APJD01000005_gene3732	1.432e-76	256.0	COG5447@1|root,COG5447@2|Bacteria,1N1KU@1224|Proteobacteria,2UCBQ@28211|Alphaproteobacteria,3JYZB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1491)	MA20_15690	-	-	-	-	-	-	-	-	-	-	-	DUF1491
SX1_k127_850226_4	1297865.APJD01000005_gene3733	4.957e-183	576.0	COG5330@1|root,COG5330@2|Bacteria,1MUTG@1224|Proteobacteria,2U0SA@28211|Alphaproteobacteria,3JQV3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterised protein conserved in bacteria (DUF2336)	-	-	-	-	-	-	-	-	-	-	-	-	DUF2336
SX1_k127_850226_14	1297865.APJD01000005_gene3734	4.649e-30	122.0	2C35M@1|root,301N4@2|Bacteria,1N8YA@1224|Proteobacteria,2UFAA@28211|Alphaproteobacteria,3K1A0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_850226_6	1297865.APJD01000005_gene3735	1.413e-159	505.0	2CVSH@1|root,32SY5@2|Bacteria,1MVP4@1224|Proteobacteria,2TTAG@28211|Alphaproteobacteria,3JQUT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_15675	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_850226_5	1297865.APJD01000005_gene3736	1.899e-178	559.0	COG0583@1|root,COG0583@2|Bacteria,1RC4N@1224|Proteobacteria,2VF1M@28211|Alphaproteobacteria,3JV5X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_850226_3	1297865.APJD01000005_gene3737	9.313e-194	605.0	COG0491@1|root,COG0491@2|Bacteria,1N1ZW@1224|Proteobacteria,2TUMN@28211|Alphaproteobacteria,3JTZK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metallo-beta-lactamase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	Lactamase_B
SX1_k127_850226_10	1297865.APJD01000005_gene3738	9.085e-119	389.0	COG5436@1|root,COG5436@2|Bacteria,1MW0D@1224|Proteobacteria,2TU65@28211|Alphaproteobacteria,3JSRN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1254)	MA20_15590	-	-	-	-	-	-	-	-	-	-	-	DUF1254
SX1_k127_850226_8	1297865.APJD01000005_gene3739	4.119e-119	385.0	COG5402@1|root,COG5402@2|Bacteria,1N26C@1224|Proteobacteria,2TT9K@28211|Alphaproteobacteria,3JU6I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1214)	MA20_15585	-	-	-	-	-	-	-	-	-	-	-	DUF1214
SX1_k127_850226_0	1297865.APJD01000005_gene3740	0.0	1559.0	COG0744@1|root,COG0744@2|Bacteria,1QTST@1224|Proteobacteria,2TQQ8@28211|Alphaproteobacteria,3JR76@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	penicillin-binding protein	pbp	-	2.4.1.129,3.4.16.4	ko:K05366	ko00550,ko01100,ko01501,map00550,map01100,map01501	-	-	-	ko00000,ko00001,ko01000,ko01003,ko01011	-	GT51	-	Transgly,Transpeptidase
SX1_k127_850226_9	1297865.APJD01000005_gene3741	8.517e-119	383.0	COG2983@1|root,COG2983@2|Bacteria,1RHMX@1224|Proteobacteria,2U99S@28211|Alphaproteobacteria,3JR5E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the UPF0260 family	MA20_15575	-	-	ko:K09160	-	-	-	-	ko00000	-	-	-	CxxCxxCC
SX1_k127_850226_13	1297865.APJD01000005_gene3742	5.729e-40	149.0	COG0477@1|root,COG2814@2|Bacteria,1MX2Q@1224|Proteobacteria,2TRNS@28211|Alphaproteobacteria,3JS7R@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Fungal trichothecene efflux pump (TRI12)	MA20_15570	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_85138_0	1441629.PCH70_21290	1.113e-235	739.0	COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,1RMBN@1236|Gammaproteobacteria,1Z4U5@136849|Pseudomonas syringae group	1236|Gammaproteobacteria	V	COG0841 Cation multidrug efflux pump	-	-	-	ko:K18299,ko:K18902	-	M00641,M00698	-	-	ko00000,ko00002,ko01504,ko02000	2.A.6.2,2.A.6.2.16	-	-	ACR_tran
SX1_k127_855716_5	1297865.APJD01000020_gene78	4.393e-204	636.0	COG1028@1|root,COG1028@2|Bacteria,1QTUD@1224|Proteobacteria,2TWT3@28211|Alphaproteobacteria,3K6NW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Belongs to the short-chain dehydrogenases reductases (SDR) family	-	-	-	-	-	-	-	-	-	-	-	-	adh_short
SX1_k127_855716_19	172088.AUGA01000033_gene4546	9.007e-37	141.0	2AH0T@1|root,3179Q@2|Bacteria,1N62E@1224|Proteobacteria,2UBXN@28211|Alphaproteobacteria,3K0FZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_855716_1	1297865.APJD01000020_gene76	0.0	1043.0	COG3203@1|root,COG3203@2|Bacteria,1MXN6@1224|Proteobacteria,2TSH7@28211|Alphaproteobacteria,3JQSQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane	ropAch1	-	-	-	-	-	-	-	-	-	-	-	Porin_2
SX1_k127_855716_14	1297865.APJD01000020_gene75	6.264e-100	327.0	COG1846@1|root,COG1846@2|Bacteria,1R3ZX@1224|Proteobacteria,2TR9P@28211|Alphaproteobacteria,3JV20@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	MA20_36835	-	-	-	-	-	-	-	-	-	-	-	MarR_2
SX1_k127_855716_2	1297865.APJD01000020_gene74	9.957e-219	680.0	COG2041@1|root,COG2041@2|Bacteria,1N9NH@1224|Proteobacteria,2UGW7@28211|Alphaproteobacteria,3K5HS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide	-	-	-	-	-	-	-	-	-	-	-	-	Oxidored_molyb
SX1_k127_855716_11	1297865.APJD01000020_gene73	6.836e-122	391.0	COG0789@1|root,COG0789@2|Bacteria,1RGYB@1224|Proteobacteria,2U9A5@28211|Alphaproteobacteria,3JQMB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, mercury resistance	merR	-	-	-	-	-	-	-	-	-	-	-	MerR_1
SX1_k127_855716_18	1298867.AUES01000004_gene596	1.501e-67	231.0	COG0776@1|root,COG0776@2|Bacteria,1RH5Z@1224|Proteobacteria,2UCDG@28211|Alphaproteobacteria,3JYSB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control	himA	-	-	ko:K04764	-	-	-	-	ko00000,ko03032,ko03036,ko03400	-	-	-	Bac_DNA_binding
SX1_k127_855716_6	1230476.C207_04964	4.601e-204	636.0	COG0332@1|root,COG0332@2|Bacteria,1MU9N@1224|Proteobacteria,2TR60@28211|Alphaproteobacteria,3JR9U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids	fabH	-	2.3.1.180	ko:K00648	ko00061,ko01100,ko01212,map00061,map01100,map01212	M00082,M00083	R10707	RC00004,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	ACP_syn_III,ACP_syn_III_C
SX1_k127_855716_3	1297865.APJD01000020_gene70	1.381e-213	666.0	COG0416@1|root,COG0416@2|Bacteria,1MVM3@1224|Proteobacteria,2TR53@28211|Alphaproteobacteria,3JU5X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA	plsX	-	2.3.1.15	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R00851,R09380	RC00004,RC00039,RC00041	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	FA_synthesis
SX1_k127_855716_12	1297865.APJD01000020_gene69	9.129e-121	395.0	COG1399@1|root,COG1399@2|Bacteria,1N7C2@1224|Proteobacteria,2UC4J@28211|Alphaproteobacteria,3JTU8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized ACR, COG1399	-	-	-	ko:K07040	-	-	-	-	ko00000	-	-	-	DUF177
SX1_k127_855716_13	1230476.C207_04961	1.237e-100	337.0	COG5452@1|root,COG5452@2|Bacteria,1N12T@1224|Proteobacteria,2UCES@28211|Alphaproteobacteria,3JRTC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Ubiquinol-cytochrome C chaperone	-	-	-	ko:K17662	-	-	-	-	ko00000,ko03029	-	-	-	Ubiq_cyt_C_chap
SX1_k127_855716_17	172088.AUGA01000017_gene2356	5.043e-92	304.0	COG2913@1|root,COG2913@2|Bacteria,1RHYM@1224|Proteobacteria,2UBU9@28211|Alphaproteobacteria,3JV18@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	SmpA / OmlA family	MA20_36760	-	-	-	-	-	-	-	-	-	-	-	SmpA_OmlA
SX1_k127_855716_7	1297865.APJD01000020_gene66	4.405e-203	646.0	COG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2U1G0@28211|Alphaproteobacteria,3JSNV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tripartite tricarboxylate transporter family receptor	MA20_36755	-	-	-	-	-	-	-	-	-	-	-	TctC
SX1_k127_855716_20	1297865.APJD01000020_gene65	2.438e-19	90.0	2C6NQ@1|root,302AQ@2|Bacteria,1NCEA@1224|Proteobacteria,2UHZD@28211|Alphaproteobacteria,3K1A7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_855716_0	1297865.APJD01000020_gene64	0.0	1308.0	COG3808@1|root,COG3808@2|Bacteria,1MUQ3@1224|Proteobacteria,2TR9G@28211|Alphaproteobacteria,3JUCV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force	hppA	-	3.6.1.1	ko:K15987	ko00190,map00190	-	-	-	ko00000,ko00001,ko01000	3.A.10.1	-	-	H_PPase
SX1_k127_855716_4	1297865.APJD01000020_gene63	2.251e-206	643.0	COG0611@1|root,COG0611@2|Bacteria,1MU9X@1224|Proteobacteria,2TTI6@28211|Alphaproteobacteria,3JQYI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1	thiL	-	2.7.4.16	ko:K00946	ko00730,ko01100,map00730,map01100	M00127	R00617	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRS,AIRS_C
SX1_k127_855716_15	1297865.APJD01000020_gene62	2.85e-97	323.0	COG0781@1|root,COG0781@2|Bacteria,1RHFZ@1224|Proteobacteria,2UBQA@28211|Alphaproteobacteria,3JWKB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons	nusB	-	-	ko:K03625	-	-	-	-	ko00000,ko03009,ko03021	-	-	-	NusB
SX1_k127_855716_16	1297865.APJD01000020_gene61	1.167e-93	308.0	COG0054@1|root,COG0054@2|Bacteria,1RD9J@1224|Proteobacteria,2U9IZ@28211|Alphaproteobacteria,3JSGU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin	ribH	GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.5.1.78	ko:K00794	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R04457	RC00960	ko00000,ko00001,ko00002,ko01000	-	-	-	DMRL_synthase
SX1_k127_855716_9	1297865.APJD01000020_gene60	5.315e-133	424.0	COG2941@1|root,COG2941@2|Bacteria,1RAK4@1224|Proteobacteria,2U85I@28211|Alphaproteobacteria,3K3Z8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Ubiquinone biosynthesis protein COQ7	-	-	-	ko:K06134	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00128	R04984,R08775	RC01254	ko00000,ko00001,ko00002,ko01000	-	-	-	COQ7
SX1_k127_855716_10	1297865.APJD01000020_gene59	7.15e-125	401.0	COG0307@1|root,COG0307@2|Bacteria,1MUMB@1224|Proteobacteria,2U3RS@28211|Alphaproteobacteria,3JSAI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Lumazine binding domain	ribE	GO:0003674,GO:0003824,GO:0004746,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.5.1.9	ko:K00793	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R00066	RC00958,RC00960	ko00000,ko00001,ko00002,ko01000	-	-	-	Lum_binding
SX1_k127_855716_8	1297865.APJD01000020_gene58	2.008e-144	458.0	COG0117@1|root,COG1985@1|root,COG0117@2|Bacteria,COG1985@2|Bacteria,1MUWT@1224|Proteobacteria,2TR70@28211|Alphaproteobacteria,3JR4M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate	ribD	-	1.1.1.193,3.5.4.26	ko:K11752	ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024	M00125	R03458,R03459	RC00204,RC00933	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C,dCMP_cyt_deam_1
SX1_k127_862714_7	1297865.APJD01000010_gene5084	4.218e-102	333.0	COG0346@1|root,COG0346@2|Bacteria,1P5FR@1224|Proteobacteria,2TVCC@28211|Alphaproteobacteria,3JSK6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	MA20_35815	-	1.13.11.25	ko:K16049	ko00984,ko01100,ko01120,ko01220,map00984,map01100,map01120,map01220	-	R04597	RC01610	ko00000,ko00001,ko01000	-	-	-	Glyoxalase
SX1_k127_862714_3	1297865.APJD01000010_gene5083	8.116e-183	575.0	COG0179@1|root,COG0179@2|Bacteria,1MUPF@1224|Proteobacteria,2TQMB@28211|Alphaproteobacteria,3JVFH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Fumarylacetoacetate (FAA) hydrolase family	MA20_35800	-	-	-	-	-	-	-	-	-	-	-	DUF2437,FAA_hydrolase
SX1_k127_862714_0	1297865.APJD01000010_gene5082	0.0	1041.0	COG0654@1|root,COG0654@2|Bacteria,1MX9R@1224|Proteobacteria,2TR4U@28211|Alphaproteobacteria,3JSWT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	1.14.13.127	ko:K05712,ko:K20218	ko00360,ko00623,ko01120,ko01220,map00360,map00623,map01120,map01220	M00545	R06786,R06787,R11197,R11198	RC00236,RC00389	ko00000,ko00001,ko00002,ko01000	-	-	-	FAD_binding_3
SX1_k127_862714_4	1297865.APJD01000010_gene5081	3.366e-153	488.0	COG1414@1|root,COG1414@2|Bacteria,1QRZN@1224|Proteobacteria,2TU6N@28211|Alphaproteobacteria,3JW87@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial transcriptional regulator	-	-	-	ko:K05818	-	-	-	-	ko00000,ko03000	-	-	-	HTH_IclR,IclR
SX1_k127_862714_1	1297865.APJD01000010_gene5080	1.078e-248	771.0	COG0349@1|root,COG0349@2|Bacteria,1MURV@1224|Proteobacteria,2TSQM@28211|Alphaproteobacteria,3JRYY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides	rnd	-	3.1.13.5	ko:K03684	-	-	-	-	ko00000,ko01000,ko03016	-	-	-	DNA_pol_A_exo1,HRDC
SX1_k127_862714_9	1297865.APJD01000010_gene5079	6.363e-38	142.0	COG1278@1|root,COG1278@2|Bacteria,1N6Q5@1224|Proteobacteria,2UF6W@28211|Alphaproteobacteria,3K08P@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	'Cold-shock' DNA-binding domain	MA20_28310	-	-	ko:K03704	-	-	-	-	ko00000,ko03000	-	-	-	CSD
SX1_k127_862714_5	1297865.APJD01000010_gene5078	1.556e-139	444.0	COG0299@1|root,COG0299@2|Bacteria,1MWN1@1224|Proteobacteria,2TRY6@28211|Alphaproteobacteria,3JS16@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate	purN	GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716	2.1.2.2	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	M00048	R04325,R04326	RC00026,RC00197,RC01128	ko00000,ko00001,ko00002,ko01000	-	-	-	Formyl_trans_N,YjbR
SX1_k127_862714_2	1297865.APJD01000010_gene5077	3.345e-236	731.0	COG0150@1|root,COG0150@2|Bacteria,1MURG@1224|Proteobacteria,2TR6G@28211|Alphaproteobacteria,3JRRD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Phosphoribosylformylglycinamidine cyclo-ligase	purM	-	6.3.3.1	ko:K01933	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04208	RC01100	ko00000,ko00001,ko00002,ko01000	-	-	-	AIRS,AIRS_C
SX1_k127_862714_6	1297865.APJD01000010_gene5076	1.512e-104	340.0	COG0558@1|root,COG0558@2|Bacteria,1MZ8B@1224|Proteobacteria,2U7AP@28211|Alphaproteobacteria,3JT6T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	CDP-alcohol phosphatidyltransferase	MA20_28295	-	2.7.8.41,2.7.8.5	ko:K00995,ko:K08744	ko00564,ko01100,map00564,map01100	-	R01801,R02030	RC00002,RC00017,RC02795	ko00000,ko00001,ko01000	-	-	-	CDP-OH_P_transf
SX1_k127_862714_8	1230476.C207_05539	7.342e-86	285.0	COG0593@1|root,COG0593@2|Bacteria,1N4PG@1224|Proteobacteria,2U96K@28211|Alphaproteobacteria,3JQY4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Bacterial dnaA  protein	hda	-	-	-	-	-	-	-	-	-	-	-	Bac_DnaA
SX1_k127_864783_0	1297865.APJD01000020_gene259	4.907e-274	844.0	COG0148@1|root,COG0148@2|Bacteria,1MU1N@1224|Proteobacteria,2TR04@28211|Alphaproteobacteria,3JQMG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis	eno	-	4.2.1.11	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	M00001,M00002,M00003,M00346,M00394	R00658	RC00349	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147	-	-	-	Enolase_C,Enolase_N
SX1_k127_864783_1	1297865.APJD01000020_gene258	2.538e-106	345.0	COG0780@1|root,COG0780@2|Bacteria,1MW0M@1224|Proteobacteria,2U57X@28211|Alphaproteobacteria,3JSS2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)	queF	-	1.7.1.13	ko:K09457	ko00790,ko01100,map00790,map01100	-	R07605	RC01875	ko00000,ko00001,ko01000,ko03016	-	-	-	QueF
SX1_k127_864783_2	1297865.APJD01000020_gene257	6.589e-14	71.0	COG0477@1|root,COG2814@2|Bacteria,1R7QS@1224|Proteobacteria,2TUXM@28211|Alphaproteobacteria,3JS25@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_881931_3	1297865.APJD01000004_gene5371	6.841e-193	603.0	COG0057@1|root,COG0057@2|Bacteria,1MU93@1224|Proteobacteria,2TR6E@28211|Alphaproteobacteria,3JSED@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family	gapA	-	1.2.1.12	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	M00001,M00002,M00003,M00165,M00166,M00308,M00552	R01061	RC00149	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147	-	-	-	Gp_dh_C,Gp_dh_N
SX1_k127_881931_0	1297865.APJD01000004_gene5372	3.253e-251	776.0	COG0126@1|root,COG0126@2|Bacteria,1MUNU@1224|Proteobacteria,2TSKQ@28211|Alphaproteobacteria,3JQMR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Belongs to the phosphoglycerate kinase family	pgk	GO:0003674,GO:0003824,GO:0004618,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576	2.7.2.3	ko:K00927	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003,M00165,M00166,M00308,M00552	R01512	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	PGK
SX1_k127_881931_1	1230476.C207_02668	8.652e-231	715.0	COG0191@1|root,COG0191@2|Bacteria,1MURX@1224|Proteobacteria,2TSAD@28211|Alphaproteobacteria,3JS5T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Function of homologous gene experimentally demonstrated in an other organism	cbbA	-	4.1.2.13	ko:K01624	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00003,M00165,M00167,M00344,M00345	R01068,R01070,R01829,R02568	RC00438,RC00439,RC00603,RC00604	ko00000,ko00001,ko00002,ko01000	-	-	-	F_bP_aldolase
SX1_k127_881931_2	1230476.C207_02667	1.954e-206	645.0	COG3588@1|root,COG3588@2|Bacteria,1MVFK@1224|Proteobacteria,2TSIV@28211|Alphaproteobacteria,3JVD2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Fructose-bisphosphate aldolase class-I	fbaB	-	4.1.2.13	ko:K01623	ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00003,M00165,M00167	R01068,R01070,R01829,R02568	RC00438,RC00439,RC00603,RC00604	ko00000,ko00001,ko00002,ko01000,ko03036,ko04131,ko04147	-	-	-	Glycolytic
SX1_k127_887304_1	640081.Dsui_0388	2.39e-20	90.0	COG0511@1|root,COG0511@2|Bacteria,1RCXA@1224|Proteobacteria,2VR5S@28216|Betaproteobacteria,2KWBJ@206389|Rhodocyclales	206389|Rhodocyclales	I	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA	accB	-	-	ko:K02160	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742	RC00040,RC00367	ko00000,ko00001,ko00002	-	-	-	Biotin_lipoyl
SX1_k127_887304_0	1121035.AUCH01000003_gene1241	3.68e-248	770.0	COG0439@1|root,COG0439@2|Bacteria,1MU4H@1224|Proteobacteria,2VISB@28216|Betaproteobacteria,2KVNS@206389|Rhodocyclales	206389|Rhodocyclales	I	Biotin carboxylase	accC	-	6.3.4.14,6.4.1.2	ko:K01961	ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212	M00082,M00376	R00742,R04385	RC00040,RC00253,RC00367	ko00000,ko00001,ko00002,ko01000	-	-	-	Biotin_carb_C,Biotin_carb_N,CPSase_L_D2
SX1_k127_887304_2	1159870.KB907784_gene1886	3.405e-12	71.0	COG2264@1|root,COG2264@2|Bacteria,1MUPC@1224|Proteobacteria,2VH76@28216|Betaproteobacteria,3T1NF@506|Alcaligenaceae	28216|Betaproteobacteria	J	Ribosomal protein L11 methyltransferase	prmA	-	-	ko:K02687	-	-	-	-	ko00000,ko01000,ko03009	-	-	-	PrmA
SX1_k127_889557_3	1297865.APJD01000022_gene329	6.439e-103	336.0	COG0387@1|root,COG0387@2|Bacteria,1MWD8@1224|Proteobacteria,2TS6S@28211|Alphaproteobacteria,3JRAK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Sodium/calcium exchanger protein	-	-	-	ko:K07300	-	-	-	-	ko00000,ko02000	2.A.19	-	-	Na_Ca_ex
SX1_k127_889557_4	1297865.APJD01000022_gene330	1.386e-55	195.0	COG1917@1|root,COG1917@2|Bacteria,1N7QJ@1224|Proteobacteria,2UFRZ@28211|Alphaproteobacteria,3JZEX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Cupin domain	MA20_03790	-	-	ko:K21700	-	-	-	-	ko00000	-	-	-	Cupin_2
SX1_k127_889557_0	1297865.APJD01000022_gene331	1.899e-168	531.0	2A52X@1|root,30TRD@2|Bacteria,1MXQZ@1224|Proteobacteria,2U25V@28211|Alphaproteobacteria,3JX1E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_889557_1	1297865.APJD01000022_gene332	1.533e-117	381.0	COG0457@1|root,COG0457@2|Bacteria,1R80G@1224|Proteobacteria,2U19K@28211|Alphaproteobacteria,3JRTD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Tetratricopeptide repeat	-	-	-	-	-	-	-	-	-	-	-	-	TPR_11,TPR_2,TPR_8
SX1_k127_889557_5	1297865.APJD01000022_gene333	4.066e-49	177.0	COG0828@1|root,COG0828@2|Bacteria,1MZA1@1224|Proteobacteria,2UC58@28211|Alphaproteobacteria,3JZDH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Belongs to the bacterial ribosomal protein bS21 family	rpsU	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904	-	ko:K02970	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S21
SX1_k127_889557_2	1297865.APJD01000022_gene334	8.279e-111	359.0	COG0580@1|root,COG0580@2|Bacteria,1MXTJ@1224|Proteobacteria,2TRGG@28211|Alphaproteobacteria,3JQPT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity	aqpZ	-	-	ko:K06188	-	-	-	-	ko00000,ko02000	1.A.8	-	-	MIP
SX1_k127_893081_2	1297865.APJD01000019_gene3178	3.876e-159	506.0	COG3898@1|root,COG3898@2|Bacteria,1P5RR@1224|Proteobacteria,2TT5Q@28211|Alphaproteobacteria,3JVSU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	HemY protein N-terminus	lapB	-	-	ko:K02498	-	-	-	-	ko00000	-	-	-	HemY_N,TPR_19
SX1_k127_893081_0	1297865.APJD01000019_gene3177	4.487e-242	751.0	COG4223@1|root,COG4223@2|Bacteria,1R5IX@1224|Proteobacteria,2TT4G@28211|Alphaproteobacteria,3JRIX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	DZ	transferase activity, transferring acyl groups other than amino-acyl groups	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_893081_3	1297865.APJD01000019_gene3176	1.033e-144	461.0	COG1587@1|root,COG1587@2|Bacteria,1NMTP@1224|Proteobacteria,2U1Y2@28211|Alphaproteobacteria,3JVP7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Uroporphyrinogen-III synthase HemD	hemD	-	4.2.1.75	ko:K01719	ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120	M00121	R03165	RC01861	ko00000,ko00001,ko00002,ko01000	-	-	-	HEM4
SX1_k127_893081_1	1297865.APJD01000019_gene3175	3.83e-161	525.0	COG0533@1|root,COG0533@2|Bacteria,1MU6S@1224|Proteobacteria,2TSF7@28211|Alphaproteobacteria,3JRK2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction	tsaD	GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360,GO:1901564	2.3.1.234	ko:K01409	-	-	R10648	RC00070,RC00416	ko00000,ko01000,ko03016	-	-	-	Peptidase_M22
SX1_k127_89330_0	1297865.APJD01000009_gene2755	0.0	1481.0	COG4995@1|root,COG4995@2|Bacteria,1QUP3@1224|Proteobacteria,2TW2P@28211|Alphaproteobacteria,3K6QI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	CHAT domain	-	-	-	-	-	-	-	-	-	-	-	-	CHAT,TPR_12
SX1_k127_89330_3	1297865.APJD01000009_gene2754	4.652e-83	278.0	COG5485@1|root,COG5485@2|Bacteria,1RBA1@1224|Proteobacteria,2U5UD@28211|Alphaproteobacteria,3K5U2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	SnoaL-like polyketide cyclase	-	-	-	-	-	-	-	-	-	-	-	-	SnoaL
SX1_k127_89330_1	1297865.APJD01000009_gene2753	6.781e-219	678.0	COG3739@1|root,COG3739@2|Bacteria,1PMEC@1224|Proteobacteria,2TRGD@28211|Alphaproteobacteria,3JVYM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF817)	-	-	-	-	-	-	-	-	-	-	-	-	DUF817
SX1_k127_89330_2	1230476.C207_03598	1.087e-171	539.0	COG2951@1|root,COG2951@2|Bacteria,1MVY0@1224|Proteobacteria,2TTVI@28211|Alphaproteobacteria,3JVHY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Transglycosylase SLT domain	-	-	-	-	-	-	-	-	-	-	-	-	SLT_2
SX1_k127_895570_6	1297865.APJD01000002_gene4031	1.141e-151	481.0	COG1051@1|root,COG1051@2|Bacteria,1QTT4@1224|Proteobacteria,2TWST@28211|Alphaproteobacteria,3JUB4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	hydrolase	-	-	3.6.1.55	ko:K03574	-	-	-	-	ko00000,ko01000,ko03400	-	-	-	NUDIX
SX1_k127_895570_2	1297865.APJD01000002_gene4030	1.629e-208	650.0	COG0330@1|root,COG0330@2|Bacteria,1PEW9@1224|Proteobacteria,2TVA5@28211|Alphaproteobacteria,3JWCI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	SPFH domain / Band 7 family	-	-	-	-	-	-	-	-	-	-	-	-	Band_7
SX1_k127_895570_9	1192124.LIG30_3309	2.982e-114	377.0	COG0061@1|root,COG0061@2|Bacteria,1NBI3@1224|Proteobacteria,2VP1Y@28216|Betaproteobacteria	28216|Betaproteobacteria	G	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_895570_12	1297865.APJD01000002_gene4028	1.278e-36	138.0	2AES8@1|root,314P1@2|Bacteria,1NB0G@1224|Proteobacteria,2UG80@28211|Alphaproteobacteria,3K14Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_895570_11	1297865.APJD01000002_gene4027	3.41e-94	318.0	COG3837@1|root,COG3837@2|Bacteria,1R9WZ@1224|Proteobacteria,2U6K6@28211|Alphaproteobacteria,3JXTD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF861)	-	-	-	-	-	-	-	-	-	-	-	-	Cupin_2
SX1_k127_895570_10	1297865.APJD01000002_gene4026	2.479e-102	337.0	COG0454@1|root,COG0456@2|Bacteria,1QU9D@1224|Proteobacteria,2TWZF@28211|Alphaproteobacteria,3JYDP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	FR47-like protein	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_1
SX1_k127_895570_8	1297865.APJD01000002_gene4025	1.237e-117	380.0	2CU7A@1|root,32SUR@2|Bacteria,1N15Z@1224|Proteobacteria,2UBPY@28211|Alphaproteobacteria,3JZY5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_895570_0	1297865.APJD01000002_gene4024	4.144e-234	725.0	COG3842@1|root,COG3842@2|Bacteria,1MU3I@1224|Proteobacteria,2TQMJ@28211|Alphaproteobacteria,3JRKH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system	-	-	3.6.3.31	ko:K02049,ko:K02052,ko:K11072	ko02010,ko02024,map02010,map02024	M00188,M00193,M00299	-	-	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.11,3.A.1.11.1,3.A.1.16,3.A.1.17	-	-	ABC_tran,TOBE_2
SX1_k127_895570_4	1297865.APJD01000002_gene4023	2.384e-168	529.0	COG1177@1|root,COG1177@2|Bacteria,1MWXM@1224|Proteobacteria,2TXYX@28211|Alphaproteobacteria,3JSD3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02053	ko02024,map02024	M00193	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.11	-	-	BPD_transp_1
SX1_k127_895570_3	1297865.APJD01000002_gene4022	3.993e-173	544.0	COG1176@1|root,COG1176@2|Bacteria,1MVFG@1224|Proteobacteria,2TSSR@28211|Alphaproteobacteria,3K664@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Binding-protein-dependent transport system inner membrane component	-	-	-	ko:K02054	ko02024,map02024	M00193	-	-	ko00000,ko00001,ko00002,ko02000	3.A.1.11	-	-	BPD_transp_1
SX1_k127_895570_1	1297865.APJD01000002_gene4021	1.689e-222	691.0	COG0687@1|root,COG0687@2|Bacteria,1MWG5@1224|Proteobacteria,2TTP2@28211|Alphaproteobacteria,3JV3Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Bacterial extracellular solute-binding protein	-	-	-	-	-	-	-	-	-	-	-	-	SBP_bac_8
SX1_k127_895570_13	1220534.B655_0036	3.052e-18	91.0	COG4032@1|root,arCOG01613@2157|Archaea,2XYBY@28890|Euryarchaeota,23PJE@183925|Methanobacteria	183925|Methanobacteria	S	sulfopyruvate decarboxylase, alpha subunit	comD	-	4.1.1.79	ko:K06034	ko00680,ko01120,map00680,map01120	M00358	R05774	RC00506	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_N
SX1_k127_895570_7	1297865.APJD01000002_gene4019	1.214e-128	414.0	COG0028@1|root,COG0028@2|Bacteria,1R6QP@1224|Proteobacteria,2TUEF@28211|Alphaproteobacteria	28211|Alphaproteobacteria	EH	COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase	comE	-	4.1.1.79	ko:K13039	ko00680,ko01120,map00680,map01120	M00358	R05774	RC00506	ko00000,ko00001,ko00002,ko01000	-	-	-	TPP_enzyme_C
SX1_k127_895570_5	1230476.C207_04425	1.225e-160	506.0	COG1282@1|root,COG1282@2|Bacteria,1MUP4@1224|Proteobacteria,2TQN1@28211|Alphaproteobacteria,3JTA7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane	pntB	GO:0008150,GO:0008152,GO:0055114	1.6.1.2	ko:K00325	ko00760,ko01100,map00760,map01100	-	R00112	RC00001	ko00000,ko00001,ko01000	-	-	-	PNTB
SX1_k127_896577_1	1297865.APJD01000011_gene6764	9.156e-177	555.0	COG0843@1|root,COG0843@2|Bacteria,1MU7S@1224|Proteobacteria,2TQP1@28211|Alphaproteobacteria,3JTJ5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B	ctaD	GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0022900,GO:0022904,GO:0034220,GO:0044237,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600	1.9.3.1	ko:K02274	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.2,3.D.4.3,3.D.4.4,3.D.4.6	-	-	COX1
SX1_k127_896577_2	172088.AUGA01000001_gene6548	9.139e-172	542.0	COG1622@1|root,COG1622@2|Bacteria,1MWHZ@1224|Proteobacteria,2TRK6@28211|Alphaproteobacteria,3JTG1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)	coxB	-	1.9.3.1	ko:K02275	ko00190,ko01100,map00190,map01100	M00155	R00081	RC00016	ko00000,ko00001,ko00002,ko01000	3.D.4.2,3.D.4.4,3.D.4.6	-	-	COX2,COX2_TM
SX1_k127_896577_5	1297865.APJD01000011_gene6762	2.225e-107	353.0	COG5342@1|root,COG5342@2|Bacteria,1NA8M@1224|Proteobacteria,2TSY3@28211|Alphaproteobacteria,3JR3U@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Invasion associated locus B (IalB) protein	MA20_19790	-	-	-	-	-	-	-	-	-	-	-	IalB
SX1_k127_896577_11	63737.Npun_F6606	3.252e-35	154.0	COG4995@1|root,COG4995@2|Bacteria	2|Bacteria	S	CHAT domain	-	-	-	-	-	-	-	-	-	-	-	-	AAA_16,CHAT,FGE-sulfatase,NB-ARC,TPR_1,TPR_12,TPR_16,TPR_2,TPR_8
SX1_k127_896577_10	324925.Ppha_2427	4.368e-37	160.0	COG1262@1|root,COG5635@1|root,COG1262@2|Bacteria,COG5635@2|Bacteria,1FEK9@1090|Chlorobi	2|Bacteria	T	NACHT nucleoside triphosphatase	-	-	2.7.11.1	ko:K12132	-	-	-	-	ko00000,ko01000,ko01001	-	-	-	CBM_6,FGE-sulfatase,NACHT,NPCBM,PEGA,Pkinase
SX1_k127_896577_4	1297865.APJD01000011_gene6761	9.717e-113	375.0	COG0526@1|root,COG0526@2|Bacteria,1R8RZ@1224|Proteobacteria,2U2T2@28211|Alphaproteobacteria,3JR91@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CO	Function proposed based on presence of conserved amino acid motif, structural feature or limited homology	-	-	-	-	-	-	-	-	-	-	-	-	AhpC-TSA,Redoxin
SX1_k127_896577_6	1297865.APJD01000011_gene6760	1.884e-101	332.0	COG1416@1|root,COG1416@2|Bacteria,1R8VQ@1224|Proteobacteria,2U1F4@28211|Alphaproteobacteria,3JXAW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	DrsE
SX1_k127_896577_8	398525.KB900701_gene845	8.717e-69	235.0	COG4270@1|root,COG4270@2|Bacteria,1N9H8@1224|Proteobacteria,2UDD8@28211|Alphaproteobacteria,3JZXY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	DoxX-like family	-	-	-	-	-	-	-	-	-	-	-	-	DoxX_2
SX1_k127_896577_7	398525.KB900701_gene846	4.307e-75	254.0	COG1733@1|root,COG1733@2|Bacteria,1RDPW@1224|Proteobacteria,2VF3F@28211|Alphaproteobacteria,3JYPD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	HxlR-like helix-turn-helix	-	-	-	-	-	-	-	-	-	-	-	-	HxlR
SX1_k127_896577_0	1297865.APJD01000011_gene6757	5.941e-309	949.0	COG0312@1|root,COG0312@2|Bacteria,1MUSK@1224|Proteobacteria,2TRSR@28211|Alphaproteobacteria,3JUF4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative modulator of DNA gyrase	tldD	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	ko:K03568	-	-	-	-	ko00000,ko01002	-	-	-	PmbA_TldD
SX1_k127_896577_3	1297865.APJD01000011_gene6756	1.921e-164	527.0	COG0681@1|root,COG0681@2|Bacteria,1MXUF@1224|Proteobacteria,2TRRM@28211|Alphaproteobacteria,3JT0X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	Belongs to the peptidase S26 family	MA20_19800	-	3.4.21.89	ko:K03100	ko02024,ko03060,map02024,map03060	-	-	-	ko00000,ko00001,ko01000,ko01002	-	-	-	Peptidase_S24
SX1_k127_896577_9	1297865.APJD01000011_gene6755	1.799e-68	235.0	COG3801@1|root,COG3801@2|Bacteria,1RHVH@1224|Proteobacteria,2U8M4@28211|Alphaproteobacteria,3JZU0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate	-	-	-	-	-	-	-	-	-	-	-	-	YjbR
SX1_k127_896577_12	1297865.APJD01000011_gene6754	4.111e-23	101.0	COG3575@1|root,COG3575@2|Bacteria,1R5GH@1224|Proteobacteria,2U1BS@28211|Alphaproteobacteria,3JS3C@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Nucleotidyltransferase	-	-	-	ko:K09962	-	-	-	-	ko00000	-	-	-	NTP_transf_6
SX1_k127_898712_1	1297865.APJD01000033_gene6938	4.285e-221	687.0	COG3115@1|root,COG3115@2|Bacteria,1QR19@1224|Proteobacteria,2U3VA@28211|Alphaproteobacteria,3JV0B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	YXWGXW repeat (2 copies)	-	-	-	-	-	-	-	-	-	-	-	-	YXWGXW
SX1_k127_898712_0	1297865.APJD01000033_gene6937	0.0	1268.0	COG2072@1|root,COG2072@2|Bacteria,1MWPJ@1224|Proteobacteria,2TT05@28211|Alphaproteobacteria,3JS8N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Flavin-binding monooxygenase-like	-	-	-	ko:K07222	-	-	-	-	ko00000	-	-	-	FMO-like,NAD_binding_8,Pyr_redox_3,SnoaL_2
SX1_k127_898712_2	1297865.APJD01000033_gene6936	1.897e-49	177.0	COG3284@1|root,COG3284@2|Bacteria,1NRG5@1224|Proteobacteria,2TR0H@28211|Alphaproteobacteria,3JS68@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	KQ	Sigma-54 interaction domain	acoR	-	-	ko:K21405	-	-	-	-	ko00000,ko03000	-	-	-	GAF,HTH_8,Sigma54_activ_2,Sigma54_activat
SX1_k127_899548_8	1297865.APJD01000010_gene5055	1.675e-129	415.0	29WMY@1|root,30I8S@2|Bacteria,1Q6UD@1224|Proteobacteria,2TX5W@28211|Alphaproteobacteria,3JUW5@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_899548_7	1297865.APJD01000010_gene5054	2.578e-137	437.0	COG0194@1|root,COG0194@2|Bacteria,1MW92@1224|Proteobacteria,2TSCQ@28211|Alphaproteobacteria,3JQSY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Essential for recycling GMP and indirectly, cGMP	gmk	GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657	2.7.4.8	ko:K00942	ko00230,ko01100,map00230,map01100	M00050	R00332,R02090	RC00002	ko00000,ko00001,ko00002,ko01000	-	-	-	Guanylate_kin
SX1_k127_899548_4	1297865.APJD01000010_gene5053	8.674e-179	561.0	COG1561@1|root,COG1561@2|Bacteria,1MWRA@1224|Proteobacteria,2TS81@28211|Alphaproteobacteria,3JTWW@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF1732)	yicC	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	-	-	-	-	-	-	-	-	-	-	DUF1732,YicC_N
SX1_k127_899548_1	1230476.C207_05518	3.341e-259	801.0	COG1559@1|root,COG1559@2|Bacteria,1MUQF@1224|Proteobacteria,2TR89@28211|Alphaproteobacteria,3JSZJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation	mltG	-	-	ko:K07082	-	-	-	-	ko00000	-	-	-	YceG
SX1_k127_899548_12	224911.27348412	2.924e-07	53.0	2978Y@1|root,2ZUGP@2|Bacteria,1RD02@1224|Proteobacteria,2U7VP@28211|Alphaproteobacteria,3JZ2X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_899548_0	1297865.APJD01000010_gene5051	6.13e-267	824.0	COG0304@1|root,COG0304@2|Bacteria,1MU1X@1224|Proteobacteria,2TR32@28211|Alphaproteobacteria,3JU0T@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP	fabF	GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901576	2.3.1.179	ko:K09458	ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212	M00083,M00572	R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119	RC00039,RC02728,RC02729,RC02888	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Ketoacyl-synt_C,ketoacyl-synt
SX1_k127_899548_11	258594.RPA3073	3.781e-42	154.0	COG0236@1|root,COG0236@2|Bacteria,1MZ4P@1224|Proteobacteria,2UBWW@28211|Alphaproteobacteria,3K039@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	Carrier of the growing fatty acid chain in fatty acid biosynthesis	acpP	GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509	-	ko:K02078	-	-	-	-	ko00000,ko00001	-	-	-	PP-binding
SX1_k127_899548_5	1297865.APJD01000010_gene5049	4.41e-149	473.0	COG1028@1|root,COG1028@2|Bacteria,1MU6X@1224|Proteobacteria,2TQZG@28211|Alphaproteobacteria,3JW0B@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	fabG	GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576	1.1.1.100	ko:K00059	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	adh_short_C2
SX1_k127_899548_3	1230476.C207_05514	2.218e-181	570.0	COG0331@1|root,COG0331@2|Bacteria,1MV6N@1224|Proteobacteria,2TRTT@28211|Alphaproteobacteria,3JQU1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	malonyl CoA-acyl carrier protein transacylase	fabD	GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576	2.3.1.39	ko:K00645	ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212	M00082	R01626,R11671	RC00004,RC00039,RC02727	ko00000,ko00001,ko00002,ko01000,ko01004	-	-	-	Acyl_transf_1
SX1_k127_899548_2	1297865.APJD01000010_gene5047	4.872e-227	704.0	COG3239@1|root,COG3239@2|Bacteria,1MUHK@1224|Proteobacteria,2TSTR@28211|Alphaproteobacteria,3JTTJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Fatty acid desaturase	MA20_28095	-	-	-	-	-	-	-	-	-	-	-	FA_desaturase
SX1_k127_899548_6	1297865.APJD01000010_gene5046	1.466e-138	442.0	COG1309@1|root,COG1309@2|Bacteria,1R60G@1224|Proteobacteria,2TUEP@28211|Alphaproteobacteria,3JVVX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial transcriptional repressor C-terminal	-	-	-	-	-	-	-	-	-	-	-	-	TetR_C_12,TetR_N
SX1_k127_899548_9	1230476.C207_05511	7.27e-88	294.0	COG0360@1|root,COG0360@2|Bacteria,1RH82@1224|Proteobacteria,2U767@28211|Alphaproteobacteria,3JQT3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Binds together with S18 to 16S ribosomal RNA	rpsF	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904	-	ko:K02990	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011,ko03029	-	-	-	Ribosomal_S6
SX1_k127_899548_10	1230476.C207_05510	2.11e-42	155.0	COG0238@1|root,COG0238@2|Bacteria,1MZ8U@1224|Proteobacteria,2UC13@28211|Alphaproteobacteria,3K018@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit	rpsR	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904	-	ko:K02963	ko03010,map03010	M00178	-	-	br01610,ko00000,ko00001,ko00002,ko03011	-	-	-	Ribosomal_S18
SX1_k127_901732_4	1297865.APJD01000007_gene1759	1.364e-62	216.0	2ES0B@1|root,33JJD@2|Bacteria,1MZAA@1224|Proteobacteria,2U9IP@28211|Alphaproteobacteria,3K014@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_901732_2	1297865.APJD01000007_gene1758	7.928e-103	335.0	COG2867@1|root,COG2867@2|Bacteria,1RFKW@1224|Proteobacteria,2U7PF@28211|Alphaproteobacteria,3JZ48@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	negative regulation of translational initiation	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_901732_0	1297865.APJD01000007_gene1756	8.131e-199	620.0	COG0583@1|root,COG0583@2|Bacteria,1MV06@1224|Proteobacteria,2TT94@28211|Alphaproteobacteria,3JUDB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	LysR substrate binding domain	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_901732_1	1297865.APJD01000007_gene1755	9.634e-157	497.0	COG1028@1|root,COG1028@2|Bacteria,1QMHJ@1224|Proteobacteria,2VF2M@28211|Alphaproteobacteria,3JQPN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	-	-	-	-	-	-	-	-	-	-	-	-	adh_short_C2
SX1_k127_901732_3	1266925.JHVX01000005_gene1844	3.667e-73	246.0	COG0208@1|root,COG0208@2|Bacteria,1MWUS@1224|Proteobacteria,2VI7U@28216|Betaproteobacteria,371XR@32003|Nitrosomonadales	28216|Betaproteobacteria	F	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides	nrdB	-	1.17.4.1	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	M00053	R02017,R02018,R02019,R02024	RC00613	ko00000,ko00001,ko00002,ko01000,ko03400	-	-	-	Ribonuc_red_sm
SX1_k127_906642_3	1297865.APJD01000020_gene176	8.554e-231	715.0	COG1008@1|root,COG1008@2|Bacteria,1MV7V@1224|Proteobacteria,2TSNK@28211|Alphaproteobacteria,3JTNA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NADH-ubiquinone oxidoreductase chain 4, amino terminus	nuoM	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	1.6.5.3	ko:K00342	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q5_N,Proton_antipo_M
SX1_k127_906642_0	1297865.APJD01000020_gene175	0.0	1413.0	COG1009@1|root,COG1009@2|Bacteria,1MW2M@1224|Proteobacteria,2TQSS@28211|Alphaproteobacteria,3JSBH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CP	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus	nuoL	-	1.6.5.3	ko:K00341	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	NADH5_C,Proton_antipo_M,Proton_antipo_N
SX1_k127_906642_8	398525.KB900701_gene5244	3.727e-46	178.0	COG0713@1|root,COG0713@2|Bacteria,1RH0S@1224|Proteobacteria,2U93P@28211|Alphaproteobacteria,3JZE4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoK	GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114	1.6.5.3	ko:K00340	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q2
SX1_k127_906642_5	1297865.APJD01000020_gene173	7.602e-120	386.0	COG0839@1|root,COG0839@2|Bacteria,1MWJV@1224|Proteobacteria,2TRB2@28211|Alphaproteobacteria,3JRMX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Belongs to the complex I subunit 6 family	nuoJ	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	1.6.5.3	ko:K00339	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Oxidored_q3
SX1_k127_906642_6	398525.KB900701_gene5246	1.583e-107	349.0	COG1143@1|root,COG1143@2|Bacteria,1MV90@1224|Proteobacteria,2TRFE@28211|Alphaproteobacteria,3JSYS@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient	nuoI	GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114	1.6.5.3,1.6.99.3	ko:K00338,ko:K03941	ko00190,ko01100,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04714,map04723,map04932,map05010,map05012,map05016	M00143,M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1,3.D.1.6	-	-	Fer4
SX1_k127_906642_4	1297865.APJD01000020_gene171	5.898e-222	689.0	COG1005@1|root,COG1005@2|Bacteria,1MU2R@1224|Proteobacteria,2TS09@28211|Alphaproteobacteria,3JRWX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone	nuoH	GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114	1.6.5.3	ko:K00337	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	NADHdh
SX1_k127_906642_1	1297865.APJD01000020_gene170	0.0	1394.0	COG1034@1|root,COG1034@2|Bacteria,1P8MN@1224|Proteobacteria,2TS97@28211|Alphaproteobacteria,3JSCC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NADH-quinone oxidoreductase	nuoG	-	1.6.5.3	ko:K00336	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Fer2_4,Molybdopterin,NADH-G_4Fe-4S_3,NADH_dhqG_C
SX1_k127_906642_7	1297865.APJD01000020_gene169	4.555e-105	341.0	2ADN4@1|root,313CW@2|Bacteria,1R9BP@1224|Proteobacteria,2U1E5@28211|Alphaproteobacteria,3JWH6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_906642_2	1297865.APJD01000020_gene168	1.576e-304	935.0	COG1894@1|root,COG1894@2|Bacteria,1MV8F@1224|Proteobacteria,2TRAH@28211|Alphaproteobacteria,3JRII@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain	nuoF	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	1.6.5.3	ko:K00335	ko00190,ko01100,map00190,map01100	M00144	R11945	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.1	-	-	Complex1_51K,NADH_4Fe-4S,SLBB
SX1_k127_906642_9	1297865.APJD01000020_gene167	2.206e-21	93.0	2BIRI@1|root,32CZ2@2|Bacteria,1N7JB@1224|Proteobacteria,2UGKF@28211|Alphaproteobacteria,3K122@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_912252_5	1297865.APJD01000003_gene6292	1.515e-25	109.0	COG0730@1|root,COG0730@2|Bacteria,1NJFY@1224|Proteobacteria,2TU93@28211|Alphaproteobacteria,3JR4Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Sulfite exporter TauE/SafE	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
SX1_k127_912252_3	1297865.APJD01000003_gene6293	1.47e-122	394.0	COG1309@1|root,COG1309@2|Bacteria,1MW6I@1224|Proteobacteria,2UBXJ@28211|Alphaproteobacteria,3JVS9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	BetI-type transcriptional repressor, C-terminal	-	-	-	-	-	-	-	-	-	-	-	-	TetR_C_6,TetR_N
SX1_k127_912252_2	1297865.APJD01000003_gene6294	2.989e-200	624.0	COG3000@1|root,COG3000@2|Bacteria,1MW5G@1224|Proteobacteria,2TU63@28211|Alphaproteobacteria,3JVEM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Fatty acid hydroxylase superfamily	-	-	-	-	-	-	-	-	-	-	-	-	FA_hydroxylase
SX1_k127_912252_0	1297865.APJD01000003_gene6295	0.0	1169.0	COG0840@1|root,COG2972@1|root,COG0840@2|Bacteria,COG2972@2|Bacteria,1MU9B@1224|Proteobacteria,2TQR7@28211|Alphaproteobacteria,3JSAR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	NT	Double sensory domain of two-component sensor kinase	-	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	HAMP,MCPsignal,dCache_3
SX1_k127_912252_1	1297865.APJD01000003_gene6296	3.829e-254	784.0	COG1960@1|root,COG1960@2|Bacteria,1MXMQ@1224|Proteobacteria,2U0CV@28211|Alphaproteobacteria,3JVF6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	-	-	1.14.13.235	ko:K22027	-	-	-	-	ko00000,ko01000	-	-	-	Acyl-CoA_dh_2,Acyl-CoA_dh_N
SX1_k127_912252_4	1297865.APJD01000003_gene6297	1.433e-64	221.0	COG0477@1|root,COG2814@2|Bacteria,1MX2P@1224|Proteobacteria,2TUAS@28211|Alphaproteobacteria,3JQNE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Major Facilitator Superfamily	MA20_40510	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_928008_4	1297865.APJD01000026_gene2582	5.644e-73	248.0	COG0603@1|root,COG0603@2|Bacteria,1MU5V@1224|Proteobacteria,2TU7F@28211|Alphaproteobacteria,3JR5A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))	queC	-	6.3.4.20	ko:K06920	ko00790,ko01100,map00790,map01100	-	R09978	RC00959	ko00000,ko00001,ko01000,ko03016	-	-	-	QueC
SX1_k127_928008_3	398525.KB900701_gene5017	1.421e-158	506.0	COG1694@1|root,COG3956@2|Bacteria,1MVKM@1224|Proteobacteria,2TRC9@28211|Alphaproteobacteria,3JUMU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	MazG nucleotide pyrophosphohydrolase domain	mazG	GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009267,GO:0009394,GO:0009605,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042594,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658	3.6.1.9	ko:K02499,ko:K04765	ko00230,ko00240,ko00760,ko00770,ko01100,map00230,map00240,map00760,map00770,map01100	-	R00086,R00087,R00103,R00287,R00426,R00515,R00662,R00720,R03004,R03036,R11323	RC00002	ko00000,ko00001,ko01000,ko03036	-	-	-	MazG
SX1_k127_928008_1	1297865.APJD01000026_gene2584	2.09e-216	673.0	COG3386@1|root,COG3386@2|Bacteria,1RHPS@1224|Proteobacteria,2UBD9@28211|Alphaproteobacteria	28211|Alphaproteobacteria	G	PFAM SMP-30 Gluconolaconase	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_928008_2	1297865.APJD01000026_gene2585	2.205e-185	580.0	COG0583@1|root,COG0583@2|Bacteria,1MW16@1224|Proteobacteria,2U0T5@28211|Alphaproteobacteria,3K5ZZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_928008_0	1297865.APJD01000026_gene2586	5.15e-280	861.0	COG2239@1|root,COG2239@2|Bacteria,1MW24@1224|Proteobacteria,2TRWK@28211|Alphaproteobacteria,3JSGK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Acts as a magnesium transporter	mgtE	GO:0000287,GO:0003674,GO:0005488,GO:0005515,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015693,GO:0030001,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0051179,GO:0051234,GO:0070838,GO:0072511	-	ko:K06213	-	-	-	-	ko00000,ko02000	1.A.26.1	-	-	CBS,MgtE,MgtE_N
SX1_k127_928929_11	1297865.APJD01000026_gene2582	3.114e-85	281.0	COG0603@1|root,COG0603@2|Bacteria,1MU5V@1224|Proteobacteria,2TU7F@28211|Alphaproteobacteria,3JR5A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))	queC	-	6.3.4.20	ko:K06920	ko00790,ko01100,map00790,map01100	-	R09978	RC00959	ko00000,ko00001,ko01000,ko03016	-	-	-	QueC
SX1_k127_928929_12	1297865.APJD01000026_gene2581	8.94e-79	266.0	2E3CR@1|root,32YC0@2|Bacteria,1N9Q9@1224|Proteobacteria,2UF5B@28211|Alphaproteobacteria,3JYQP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Nitrile hydratase beta subunit	MA20_29595	-	-	-	-	-	-	-	-	-	-	-	NHase_beta
SX1_k127_928929_7	1297865.APJD01000026_gene2580	2.937e-147	466.0	28I45@1|root,2Z87Q@2|Bacteria,1R432@1224|Proteobacteria,2U3PK@28211|Alphaproteobacteria,3JS7H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	NHase catalyzes the hydration of various nitrile compounds to the corresponding amides	nthB	-	4.2.1.84	ko:K20807	ko00364,ko00380,ko00627,ko00643,ko01120,map00364,map00380,map00627,map00643,map01120	-	R04020,R05379,R05596,R07780,R07854	RC00483,RC01345,RC01432	ko00000,ko00001,ko01000	-	-	-	NHase_beta
SX1_k127_928929_8	1297865.APJD01000026_gene2579	9.101e-137	435.0	2BZ0R@1|root,2Z7U0@2|Bacteria,1MX37@1224|Proteobacteria,2TSBD@28211|Alphaproteobacteria,3JT2X@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Nitrile hydratase, alpha chain	nthA	-	4.2.1.84	ko:K01721	ko00364,ko00380,ko00627,ko00643,ko01120,map00364,map00380,map00627,map00643,map01120	-	R02828,R04020,R05379,R05596,R07780,R07854	RC00483,RC00792,RC01345,RC01432	ko00000,ko00001,ko01000	-	-	-	NHase_alpha
SX1_k127_928929_5	1297865.APJD01000026_gene2578	4.627e-169	537.0	COG1024@1|root,COG1024@2|Bacteria,1NJ9M@1224|Proteobacteria,2U07X@28211|Alphaproteobacteria,3JR0Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Enoyl-CoA hydratase/isomerase	MA20_29580	-	-	-	-	-	-	-	-	-	-	-	ECH_1
SX1_k127_928929_15	1297865.APJD01000026_gene2577	2.004e-48	174.0	29ES9@1|root,301Q2@2|Bacteria,1N9A3@1224|Proteobacteria,2UHM1@28211|Alphaproteobacteria,3K0W8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_928929_2	1297865.APJD01000026_gene2576	6.212e-249	769.0	28JIP@1|root,2Z82C@2|Bacteria,1R5N9@1224|Proteobacteria,2U3KH@28211|Alphaproteobacteria,3JWAR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	S1/P1 Nuclease	-	-	-	-	-	-	-	-	-	-	-	-	S1-P1_nuclease
SX1_k127_928929_4	1297865.APJD01000026_gene2575	7.107e-196	610.0	COG0346@1|root,COG0346@2|Bacteria,1MXNZ@1224|Proteobacteria,2VG67@28211|Alphaproteobacteria,3JXZC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	1.13.11.14	ko:K10621	ko00362,ko00622,ko01120,ko01220,map00362,map00622,map01120,map01220	M00539	R01507,R05248	RC00387,RC01308	br01602,ko00000,ko00001,ko00002,ko01000	-	-	-	Glyoxalase
SX1_k127_928929_3	1297865.APJD01000026_gene2574	5.513e-197	616.0	COG0346@1|root,COG0346@2|Bacteria,1RBGG@1224|Proteobacteria,2U64T@28211|Alphaproteobacteria,3JY2A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	-	-	1.13.11.14	ko:K10621	ko00362,ko00622,ko01120,ko01220,map00362,map00622,map01120,map01220	M00539	R01507,R05248	RC00387,RC01308	br01602,ko00000,ko00001,ko00002,ko01000	-	-	-	Glyoxalase
SX1_k127_928929_9	936455.KI421499_gene729	1.47e-125	404.0	COG1309@1|root,COG1309@2|Bacteria,1RAF9@1224|Proteobacteria,2U62G@28211|Alphaproteobacteria,3K0SV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory proteins, tetR family	-	-	-	-	-	-	-	-	-	-	-	-	TetR_N
SX1_k127_928929_14	1297865.APJD01000026_gene2572	2.133e-60	218.0	COG2146@1|root,COG2146@2|Bacteria,1NCKX@1224|Proteobacteria,2UCFA@28211|Alphaproteobacteria,3K05Q@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rieske-like [2Fe-2S] domain	-	-	-	-	-	-	-	-	-	-	-	-	Rieske
SX1_k127_928929_6	1297865.APJD01000026_gene2571	4.643e-154	492.0	COG1028@1|root,COG1028@2|Bacteria,1MW50@1224|Proteobacteria,2TRUZ@28211|Alphaproteobacteria,3JVT7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	KR domain	-	-	1.3.1.58	ko:K10620	ko00622,ko01120,ko01220,map00622,map01120,map01220	M00539	R05240	RC00057	br01602,ko00000,ko00001,ko00002,ko01000	-	-	-	adh_short_C2
SX1_k127_928929_10	1297865.APJD01000026_gene2570	1.691e-98	323.0	COG5517@1|root,COG5517@2|Bacteria,1RCT2@1224|Proteobacteria,2U8ZF@28211|Alphaproteobacteria,3JZ1I@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Ring hydroxylating beta subunit	-	-	1.14.12.25	ko:K16303	ko00622,ko01120,ko01220,map00622,map01120,map01220	M00539	R05247	RC00267	br01602,ko00000,ko00001,ko00002,ko01000	-	-	-	Ring_hydroxyl_B
SX1_k127_928929_0	1297865.APJD01000026_gene2569	3.666e-291	893.0	COG4638@1|root,COG4638@2|Bacteria,1N6MJ@1224|Proteobacteria,2TV8C@28211|Alphaproteobacteria,3K651@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Ring hydroxylating alpha subunit (catalytic domain)	-	-	1.14.12.25	ko:K10619	ko00622,ko01120,ko01220,map00622,map01120,map01220	M00539	R05247	RC00267	br01602,ko00000,ko00001,ko00002,ko01000	-	-	-	Rieske,Ring_hydroxyl_A
SX1_k127_928929_1	1297865.APJD01000026_gene2568	6.501e-253	790.0	COG0446@1|root,COG0446@2|Bacteria,1NR3M@1224|Proteobacteria,2U2VC@28211|Alphaproteobacteria,3JVVI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Reductase C-terminal	-	-	1.18.1.3	ko:K00529	ko00071,ko00360,ko01120,ko01220,map00071,map00360,map01120,map01220	M00545	R02000,R06782,R06783	RC00098	br01602,ko00000,ko00001,ko00002,ko01000	-	-	-	Pyr_redox_2,Reductase_C
SX1_k127_928929_13	1297865.APJD01000026_gene2567	2.278e-78	263.0	COG2159@1|root,COG2159@2|Bacteria,1R5PG@1224|Proteobacteria,2U2G9@28211|Alphaproteobacteria,3JWBY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Amidohydrolase	-	-	4.1.1.45	ko:K03392	ko00380,ko01100,map00380,map01100	M00038	R04323	RC00779	ko00000,ko00001,ko00002,ko01000	-	-	-	Amidohydro_2
SX1_k127_930546_3	1297865.APJD01000005_gene3977	8.075e-20	88.0	COG4773@1|root,COG4773@2|Bacteria,1N09E@1224|Proteobacteria,2UDKC@28211|Alphaproteobacteria,3K0MJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Secretin and TonB N terminus short domain	-	-	-	-	-	-	-	-	-	-	-	-	TonB_2
SX1_k127_930546_2	1297865.APJD01000005_gene3978	6.295e-96	316.0	COG1595@1|root,COG1595@2|Bacteria,1RHYH@1224|Proteobacteria,2UA7M@28211|Alphaproteobacteria,3JZHQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Belongs to the sigma-70 factor family. ECF subfamily	-	-	-	ko:K03088	-	-	-	-	ko00000,ko03021	-	-	-	Sigma70_r2,Sigma70_r4_2
SX1_k127_930546_1	1297865.APJD01000005_gene3979	3.669e-206	644.0	COG3712@1|root,COG3712@2|Bacteria,1PXE6@1224|Proteobacteria,2TTZ0@28211|Alphaproteobacteria,3JXFV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	PT	Domain of unknown function (DUF4880)	-	-	-	-	-	-	-	-	-	-	-	-	DUF4880,FecR
SX1_k127_930546_0	1297865.APJD01000005_gene3980	0.0	6239.0	COG3210@1|root,COG3210@2|Bacteria,1MXIP@1224|Proteobacteria,2TTVB@28211|Alphaproteobacteria,3JS9Y@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	U	haemagglutination activity domain	-	-	-	-	-	-	-	-	-	-	-	-	DUF3739,Glug,Haemagg_act
SX1_k127_933609_6	1297865.APJD01000006_gene4325	2.967e-154	488.0	COG0477@1|root,COG2814@2|Bacteria,1MX70@1224|Proteobacteria,2U3BI@28211|Alphaproteobacteria,3JXED@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_933609_5	1297865.APJD01000006_gene4324	2.04e-167	526.0	COG2267@1|root,COG2267@2|Bacteria,1PIJ1@1224|Proteobacteria,2U2FG@28211|Alphaproteobacteria,3JUWG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Serine aminopeptidase, S33	-	-	-	-	-	-	-	-	-	-	-	-	Abhydrolase_1
SX1_k127_933609_0	1297865.APJD01000006_gene4323	0.0	1127.0	COG0654@1|root,COG0654@2|Bacteria,1MUN4@1224|Proteobacteria,2TRHJ@28211|Alphaproteobacteria,3JW9N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	FAD binding domain	-	-	-	-	-	-	-	-	-	-	-	-	FAD_binding_3
SX1_k127_933609_4	1297865.APJD01000006_gene4322	8.136e-182	574.0	COG0583@1|root,COG0583@2|Bacteria,1R8E9@1224|Proteobacteria,2U3CQ@28211|Alphaproteobacteria,3JVQB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_933609_1	1297865.APJD01000006_gene4321	5.721e-313	960.0	COG4638@1|root,COG4638@2|Bacteria,1N6MJ@1224|Proteobacteria,2TVEE@28211|Alphaproteobacteria,3JXEV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Ring hydroxylating alpha subunit (catalytic domain)	-	-	1.14.12.10	ko:K00479,ko:K05549	ko00362,ko00364,ko00622,ko01100,ko01120,ko01220,map00362,map00364,map00622,map01100,map01120,map01220	M00551	R05290,R05291,R05428,R05621,R05622,R05665,R08100,R08101,R08108,R08109,R08110	RC00270,RC01378,RC01450,RC01910	br01602,ko00000,ko00001,ko00002,ko01000	-	-	-	Rieske,Ring_hydroxyl_A
SX1_k127_933609_8	1297865.APJD01000006_gene4320	5.432e-106	347.0	COG5517@1|root,COG5517@2|Bacteria,1RAVG@1224|Proteobacteria,2U6A6@28211|Alphaproteobacteria,3JSRP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	Q	Ring hydroxylating beta subunit	-	-	1.14.12.10	ko:K05550	ko00362,ko00364,ko00622,ko01100,ko01120,ko01220,map00362,map00364,map00622,map01100,map01120,map01220	M00551	R05290,R05291,R05428,R05621,R05622,R05665,R08100,R08101,R08108,R08109,R08110	RC00270,RC01378,RC01450,RC01910	br01602,ko00000,ko00001,ko00002,ko01000	-	-	-	Ring_hydroxyl_B
SX1_k127_933609_10	1297865.APJD01000006_gene4319	6.773e-68	231.0	COG2146@1|root,COG2146@2|Bacteria,1N8PE@1224|Proteobacteria,2UF7G@28211|Alphaproteobacteria,3JZH1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Rieske-like [2Fe-2S] domain	-	-	-	ko:K05710,ko:K14578	ko00360,ko00624,ko00626,ko00627,ko00633,ko00642,ko01100,ko01120,ko01220,map00360,map00624,map00626,map00627,map00633,map00642,map01100,map01120,map01220	M00534,M00545,M00638	R02968,R05422,R05423,R05424,R05425,R05426,R05427,R06782,R06783,R06909,R06930,R06937,R07704,R07706,R07709,R07710,R09159,R09233	RC00091,RC00098,RC00157,RC00274,RC00275,RC00490,RC01376,RC01377,RC01801	br01602,ko00000,ko00001,ko00002	-	-	-	Rieske
SX1_k127_933609_2	1297865.APJD01000006_gene4318	6.078e-279	860.0	COG2271@1|root,COG2271@2|Bacteria,1QP2G@1224|Proteobacteria,2TTWW@28211|Alphaproteobacteria,3JWX3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Major Facilitator Superfamily	-	-	-	-	-	-	-	-	-	-	-	-	MFS_1
SX1_k127_933609_7	1297865.APJD01000006_gene4317	2.489e-113	389.0	COG1846@1|root,COG1846@2|Bacteria,1R8BH@1224|Proteobacteria,2U083@28211|Alphaproteobacteria,3JXMJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix multiple antibiotic resistance protein	-	-	-	-	-	-	-	-	-	-	-	-	MarR_2
SX1_k127_933609_11	1297865.APJD01000006_gene4316	1.962e-51	183.0	2A8Z4@1|root,30Y2X@2|Bacteria,1RHRS@1224|Proteobacteria,2U9YT@28211|Alphaproteobacteria,3JZCM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_933609_3	1297865.APJD01000006_gene4315	8.318e-210	653.0	COG2207@1|root,COG2207@2|Bacteria,1Q3UX@1224|Proteobacteria,2U3Z0@28211|Alphaproteobacteria,3JSPK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	ko:K04033	-	-	-	-	ko00000,ko03000	-	-	-	HTH_18
SX1_k127_933609_9	1297865.APJD01000006_gene4314	4.459e-77	258.0	COG3249@1|root,COG3249@2|Bacteria,1PR3V@1224|Proteobacteria,2U1M2@28211|Alphaproteobacteria,3JVVY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Uncharacterized protein conserved in bacteria (DUF2066)	-	-	-	ko:K09938	-	-	-	-	ko00000	-	-	-	DUF2066
SX1_k127_933679_7	1297865.APJD01000005_gene3721	3.963e-111	364.0	COG0433@1|root,COG0433@2|Bacteria,1MU59@1224|Proteobacteria,2TRU8@28211|Alphaproteobacteria,3JRPZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Bacterial protein of unknown function (DUF853)	yjgR	-	-	ko:K06915	-	-	-	-	ko00000	-	-	-	DUF853
SX1_k127_933679_13	398525.KB900701_gene3752	3.41e-66	229.0	2AUTH@1|root,31KGJ@2|Bacteria,1RH09@1224|Proteobacteria,2UAJV@28211|Alphaproteobacteria,3JYQI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_15750	-	-	-	-	-	-	-	-	-	-	-	DUF2780
SX1_k127_933679_11	1297865.APJD01000005_gene3720	8.487e-77	260.0	COG3743@1|root,COG3743@2|Bacteria,1RA3K@1224|Proteobacteria,2U7GQ@28211|Alphaproteobacteria,3JY2M@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Domain of unknown function (DUF4332)	MA20_15755	-	-	-	-	-	-	-	-	-	-	-	DUF4332
SX1_k127_933679_5	1297865.APJD01000005_gene3719	1.678e-168	532.0	COG0294@1|root,COG0294@2|Bacteria,1MUIR@1224|Proteobacteria,2TTMG@28211|Alphaproteobacteria,3JRVE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives	folP	-	2.5.1.15,2.7.6.3	ko:K00796,ko:K13941,ko:K18824	ko00790,ko01100,map00790,map01100	M00126,M00840,M00841	R03066,R03067,R03503	RC00002,RC00017,RC00121,RC00842	ko00000,ko00001,ko00002,ko01000,ko01504	-	-	-	Pterin_bind
SX1_k127_933679_12	1297865.APJD01000005_gene3718	2.25e-70	246.0	COG1539@1|root,COG1539@2|Bacteria,1RHII@1224|Proteobacteria,2UGT3@28211|Alphaproteobacteria,3JZ50@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin	folB	-	1.13.11.81,4.1.2.25,5.1.99.8	ko:K01633	ko00790,ko01100,map00790,map01100	M00126,M00840	R03504,R11037,R11073	RC00721,RC00943,RC01479,RC03333,RC03334	ko00000,ko00001,ko00002,ko01000	-	-	-	FolB
SX1_k127_933679_9	1297865.APJD01000005_gene3717	7.207e-101	329.0	COG0801@1|root,COG0801@2|Bacteria,1MZH8@1224|Proteobacteria,2U8D6@28211|Alphaproteobacteria,3JWAZ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)	folK	-	2.7.6.3,4.1.2.25	ko:K00950,ko:K13940	ko00790,ko01100,map00790,map01100	M00126,M00841	R03503,R03504	RC00002,RC00017,RC00721,RC00943	ko00000,ko00001,ko00002,ko01000	-	-	-	HPPK
SX1_k127_933679_1	1297865.APJD01000005_gene3716	0.0	1222.0	COG1884@1|root,COG1884@2|Bacteria,1NR2K@1224|Proteobacteria,2TSYT@28211|Alphaproteobacteria,3JR6E@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Methylmalonyl-CoA mutase	mutA	-	5.4.99.2	ko:K01847	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	M00373,M00376,M00741	R00833	RC00395	ko00000,ko00001,ko00002,ko01000	-	-	-	MM_CoA_mutase
SX1_k127_933679_10	1230476.C207_06224	1.409e-94	311.0	COG3791@1|root,COG3791@2|Bacteria,1RE8S@1224|Proteobacteria,2U73V@28211|Alphaproteobacteria,3JVB0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Glutathione-dependent formaldehyde-activating enzyme	-	-	-	-	-	-	-	-	-	-	-	-	GFA
SX1_k127_933679_0	1297865.APJD01000005_gene3714	0.0	1408.0	COG1884@1|root,COG2185@1|root,COG1884@2|Bacteria,COG2185@2|Bacteria,1MUXX@1224|Proteobacteria,2TQYC@28211|Alphaproteobacteria,3JSBP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Methylmalonyl-CoA mutase	mutB	-	5.4.99.2	ko:K01847	ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200	M00373,M00376,M00741	R00833	RC00395	ko00000,ko00001,ko00002,ko01000	-	-	-	B12-binding,MM_CoA_mutase
SX1_k127_933679_4	1297865.APJD01000005_gene3713	1.843e-172	542.0	2ANQE@1|root,31DQ0@2|Bacteria,1MWJD@1224|Proteobacteria,2TTQI@28211|Alphaproteobacteria,3JRIK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF3298)	-	-	-	-	-	-	-	-	-	-	-	-	DUF3298,DUF4163
SX1_k127_933679_8	1297865.APJD01000005_gene3712	4.081e-104	346.0	COG3427@1|root,COG3427@2|Bacteria,1RCAV@1224|Proteobacteria,2U6C0@28211|Alphaproteobacteria,3JYHR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Polyketide cyclase / dehydrase and lipid transport	-	-	-	-	-	-	-	-	-	-	-	-	Polyketide_cyc2
SX1_k127_933679_2	1297865.APJD01000005_gene3711	1.391e-269	839.0	COG0705@1|root,COG0705@2|Bacteria,1Q79P@1224|Proteobacteria,2UAMU@28211|Alphaproteobacteria,3JWSP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Rhomboid family	-	-	3.4.21.105	ko:K19225	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Rhomboid
SX1_k127_933679_3	1297865.APJD01000005_gene3710	1.372e-200	629.0	COG1703@1|root,COG1703@2|Bacteria,1MVI0@1224|Proteobacteria,2TS96@28211|Alphaproteobacteria,3JRRJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	LAO AO transport system	argK	-	-	ko:K07588	-	-	-	-	ko00000,ko01000	-	-	-	ArgK
SX1_k127_933679_6	1297865.APJD01000005_gene3709	8.527e-128	409.0	COG2039@1|root,COG2039@2|Bacteria,1MWYG@1224|Proteobacteria,2TU8G@28211|Alphaproteobacteria,3JQYT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Removes 5-oxoproline from various penultimate amino acid residues except L-proline	MA20_15835	-	3.4.19.3	ko:K01304	-	-	-	-	ko00000,ko01000,ko01002	-	-	-	Peptidase_C15
SX1_k127_934564_4	1297865.APJD01000001_gene5950	2.922e-62	218.0	COG0520@1|root,COG0520@2|Bacteria,1MUPD@1224|Proteobacteria,2TRNY@28211|Alphaproteobacteria,3JSRM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine	sufS	-	2.8.1.7,4.4.1.16	ko:K11717	ko00450,ko01100,map00450,map01100	-	R03599,R11528	RC00961,RC01789,RC02313	ko00000,ko00001,ko01000	-	-	-	Aminotran_5
SX1_k127_934564_1	1297865.APJD01000001_gene5951	2.932e-275	852.0	COG0719@1|root,COG0719@2|Bacteria,1MVK0@1224|Proteobacteria,2TTK9@28211|Alphaproteobacteria,3JSQ2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Uncharacterized protein family (UPF0051)	sufD	-	-	ko:K09015	-	-	-	-	ko00000	-	-	-	UPF0051
SX1_k127_934564_3	1230476.C207_01354	3.036e-154	488.0	COG0396@1|root,COG0396@2|Bacteria,1MUGK@1224|Proteobacteria,2TS8T@28211|Alphaproteobacteria,3JTK7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	ATPases associated with a variety of cellular activities	sufC	-	-	ko:K09013	-	-	-	-	ko00000,ko02000	-	-	-	ABC_tran
SX1_k127_934564_0	1297865.APJD01000001_gene5953	0.0	1009.0	COG0719@1|root,COG0719@2|Bacteria,1MVKY@1224|Proteobacteria,2TRU6@28211|Alphaproteobacteria,3JQSA@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Uncharacterized protein family (UPF0051)	sufB	-	-	ko:K09014	-	-	-	-	ko00000	-	-	-	UPF0051
SX1_k127_934564_2	1297865.APJD01000001_gene5954	4.679e-226	702.0	COG1104@1|root,COG1104@2|Bacteria,1MU1C@1224|Proteobacteria,2TSQE@28211|Alphaproteobacteria,3JRD9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Aminotransferase class-V	nifS	GO:0000096,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006464,GO:0006520,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016043,GO:0016226,GO:0016740,GO:0016782,GO:0016783,GO:0018130,GO:0018282,GO:0018283,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0022607,GO:0031071,GO:0031163,GO:0031974,GO:0031981,GO:0032324,GO:0034641,GO:0036211,GO:0042278,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043545,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0046983,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0065003,GO:0070013,GO:0071704,GO:0071840,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657	2.8.1.7	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122	-	R07460,R11528,R11529	RC01789,RC02313	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029	-	-	-	Aminotran_5
SX1_k127_941566_2	1297865.APJD01000003_gene6107	6.675e-208	646.0	COG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2TR2W@28211|Alphaproteobacteria,3JTTG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	IQ	AMP-binding enzyme C-terminal domain	MA20_22985	-	-	ko:K00666	-	-	-	-	ko00000,ko01000,ko01004	-	-	-	AMP-binding,AMP-binding_C
SX1_k127_941566_1	1297865.APJD01000003_gene6106	2.062e-266	820.0	COG0683@1|root,COG0683@2|Bacteria,1MV1Z@1224|Proteobacteria,2TRTD@28211|Alphaproteobacteria,3JTXH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Receptor family ligand binding region	-	-	-	-	-	-	-	-	-	-	-	-	Peripla_BP_6
SX1_k127_941566_4	1297865.APJD01000003_gene6105	1.747e-138	442.0	COG4089@1|root,COG4089@2|Bacteria,1MV8K@1224|Proteobacteria,2U3GA@28211|Alphaproteobacteria,3JT2V@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF1614)	-	-	-	-	-	-	-	-	-	-	-	-	DUF1614
SX1_k127_941566_3	1297865.APJD01000003_gene6104	1.484e-157	498.0	COG1813@1|root,COG1813@2|Bacteria,1MXA5@1224|Proteobacteria,2TU2N@28211|Alphaproteobacteria,3K6M3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Helix-turn-helix XRE-family like proteins	-	-	-	-	-	-	-	-	-	-	-	-	HTH_3,HTH_31
SX1_k127_941566_0	1297865.APJD01000003_gene6103	0.0	1096.0	COG2304@1|root,COG2304@2|Bacteria,1MW8K@1224|Proteobacteria,2TV9Y@28211|Alphaproteobacteria,3JSX0@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Vault protein inter-alpha-trypsin domain	-	-	-	ko:K07114	-	-	-	-	ko00000,ko02000	1.A.13.2.2,1.A.13.2.3	-	-	VIT,VWA_3
SX1_k127_952557_0	1297865.APJD01000010_gene4895	8.601e-240	744.0	COG2207@1|root,COG2207@2|Bacteria,1P4M5@1224|Proteobacteria,2TSQV@28211|Alphaproteobacteria,3JXM4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	helix_turn_helix, arabinose operon control protein	-	-	-	-	-	-	-	-	-	-	-	-	HTH_18
SX1_k127_952557_1	1297865.APJD01000010_gene4894	1.77e-204	637.0	COG1192@1|root,COG1192@2|Bacteria,1MVKR@1224|Proteobacteria,2TRZY@28211|Alphaproteobacteria,3JUQ2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	D	ATPase MipZ	mipZ	-	-	ko:K03496	-	-	-	-	ko00000,ko03036,ko04812	-	-	-	MipZ
SX1_k127_952557_2	1297865.APJD01000010_gene4893	1.001e-174	552.0	COG0414@1|root,COG0414@2|Bacteria,1MV1S@1224|Proteobacteria,2TS2D@28211|Alphaproteobacteria,3JVAJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate	panC	GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605	6.3.2.1	ko:K01918	ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110	M00119	R02473	RC00096,RC00141	ko00000,ko00001,ko00002,ko01000	-	-	-	Pantoate_ligase
SX1_k127_952557_3	1297865.APJD01000010_gene4892	6.219e-127	406.0	COG3904@1|root,COG3904@2|Bacteria,1MY3P@1224|Proteobacteria,2U2AS@28211|Alphaproteobacteria,3JRMD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	periplasmic protein	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_956505_17	1297865.APJD01000014_gene438	2.984e-67	229.0	COG0730@1|root,COG0730@2|Bacteria,1R712@1224|Proteobacteria,2U3AA@28211|Alphaproteobacteria,3JWHI@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	membrane transporter protein	-	-	-	ko:K07090	-	-	-	-	ko00000	-	-	-	TauE
SX1_k127_956505_20	1297865.APJD01000014_gene439	3.313e-48	175.0	COG0790@1|root,COG0790@2|Bacteria,1N8SR@1224|Proteobacteria,2UFFQ@28211|Alphaproteobacteria,3K0AK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	COG0790 FOG TPR repeat, SEL1 subfamily	MA20_36515	-	-	ko:K07126	-	-	-	-	ko00000	-	-	-	Sel1
SX1_k127_956505_23	666684.AfiDRAFT_3445	1.536e-06	51.0	2AG9H@1|root,316F0@2|Bacteria,1NHH5@1224|Proteobacteria,2UJH1@28211|Alphaproteobacteria,3K27W@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_956505_1	1297865.APJD01000014_gene441	2.5e-323	990.0	COG0064@1|root,COG0064@2|Bacteria,1MUKG@1224|Proteobacteria,2TRHX@28211|Alphaproteobacteria,3JQRE@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)	gatB	GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564	6.3.5.6,6.3.5.7	ko:K02434	ko00970,ko01100,map00970,map01100	-	R03905,R04212	RC00010	ko00000,ko00001,ko01000,ko03029	-	-	-	GatB_N,GatB_Yqey
SX1_k127_956505_3	1297865.APJD01000014_gene442	2.499e-291	896.0	COG1752@1|root,COG1752@2|Bacteria,1MUI6@1224|Proteobacteria,2TUZ3@28211|Alphaproteobacteria,3JVGX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Patatin-like phospholipase	-	-	-	ko:K07001	-	-	-	-	ko00000	-	-	-	Patatin
SX1_k127_956505_18	1297865.APJD01000014_gene443	8.023e-57	198.0	2C4KB@1|root,32YM4@2|Bacteria,1N74A@1224|Proteobacteria,2UHJ4@28211|Alphaproteobacteria,3JZRB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_956505_2	1297865.APJD01000014_gene444	3.96e-319	977.0	COG0154@1|root,COG0154@2|Bacteria,1MUVQ@1224|Proteobacteria,2TRFY@28211|Alphaproteobacteria,3JU77@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)	gatA	-	6.3.5.6,6.3.5.7	ko:K02433	ko00970,ko01100,map00970,map01100	-	R03905,R04212	RC00010	ko00000,ko00001,ko01000,ko03029	-	-	-	Amidase
SX1_k127_956505_21	1297865.APJD01000014_gene445	3.552e-44	162.0	2A97Q@1|root,30YCE@2|Bacteria,1N34M@1224|Proteobacteria,2UCVU@28211|Alphaproteobacteria,3K0FV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_36490	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_956505_19	1297865.APJD01000014_gene446	1.133e-51	186.0	COG0721@1|root,COG0721@2|Bacteria,1MZQP@1224|Proteobacteria,2UBSZ@28211|Alphaproteobacteria,3JZDY@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)	gatC	-	6.3.5.6,6.3.5.7	ko:K02435	ko00970,ko01100,map00970,map01100	-	R03905,R04212	RC00010	ko00000,ko00001,ko01000,ko03029	-	-	-	Glu-tRNAGln
SX1_k127_956505_4	1297865.APJD01000014_gene447	4.856e-220	684.0	COG2070@1|root,COG2070@2|Bacteria,1MU2F@1224|Proteobacteria,2TUT7@28211|Alphaproteobacteria,3JRUT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Protein of unknown function (DUF561)	MA20_36480	-	1.13.12.16	ko:K00459	ko00910,map00910	-	R00025	RC02541,RC02759	ko00000,ko00001,ko01000	-	-	-	NMO
SX1_k127_956505_5	1297865.APJD01000014_gene448	1.381e-200	626.0	COG2070@1|root,COG2070@2|Bacteria,1MWPC@1224|Proteobacteria,2TQRT@28211|Alphaproteobacteria,3JQWB@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Nitronate monooxygenase	MA20_36475	-	1.13.12.16	ko:K00459	ko00910,map00910	-	R00025	RC02541,RC02759	ko00000,ko00001,ko01000	-	-	-	NMO
SX1_k127_956505_6	1297865.APJD01000014_gene449	4.142e-185	579.0	COG0583@1|root,COG0583@2|Bacteria,1N8HZ@1224|Proteobacteria,2TV4S@28211|Alphaproteobacteria,3JRRM@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	MA20_36470	-	-	-	-	-	-	-	-	-	-	-	HTH_1,LysR_substrate
SX1_k127_956505_14	1297865.APJD01000014_gene450	2.396e-96	317.0	COG0816@1|root,COG0816@2|Bacteria,1RDHZ@1224|Proteobacteria,2U98Y@28211|Alphaproteobacteria,3JVCJ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA	ruvX	GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360	-	ko:K07447	-	-	-	-	ko00000,ko01000	-	-	-	RuvX
SX1_k127_956505_7	1297865.APJD01000014_gene451	8.852e-179	568.0	COG0679@1|root,COG0679@2|Bacteria,1N1X9@1224|Proteobacteria,2TV2I@28211|Alphaproteobacteria,3JR2H@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Membrane transport protein	-	-	-	ko:K07088	-	-	-	-	ko00000	-	-	-	Mem_trans
SX1_k127_956505_12	1297865.APJD01000014_gene452	1.458e-115	372.0	COG3896@1|root,COG3896@2|Bacteria,1NX1Z@1224|Proteobacteria,2U3CG@28211|Alphaproteobacteria,3K41A@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	V	Chloramphenicol phosphotransferase-like protein	-	-	-	ko:K18554	-	-	-	-	br01600,ko00000,ko01000,ko01504	-	-	-	CPT
SX1_k127_956505_8	1297865.APJD01000014_gene453	2.884e-166	523.0	COG1266@1|root,COG1266@2|Bacteria,1QPQ0@1224|Proteobacteria,2TTX7@28211|Alphaproteobacteria,3JSCR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	CAAX protease self-immunity	-	-	-	ko:K07052	-	-	-	-	ko00000	-	-	-	Abi
SX1_k127_956505_0	1297865.APJD01000014_gene454	0.0	1104.0	COG1960@1|root,COG1960@2|Bacteria,1MU20@1224|Proteobacteria,2TQU2@28211|Alphaproteobacteria,3JST9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	I	Acyl-CoA dehydrogenase, C-terminal domain	aidB	GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003995,GO:0005488,GO:0005515,GO:0006355,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008470,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016491,GO:0016627,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0033554,GO:0042802,GO:0043565,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0055114,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141	-	ko:K09456	-	-	-	-	ko00000	-	-	-	Acyl-CoA_dh_1,Acyl-CoA_dh_M
SX1_k127_956505_15	1297865.APJD01000014_gene455	2.941e-85	283.0	2FB9S@1|root,343FX@2|Bacteria,1RFFN@1224|Proteobacteria,2U7UY@28211|Alphaproteobacteria,3JYYK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_956505_9	1297865.APJD01000014_gene456	1.428e-156	494.0	COG2173@1|root,COG2173@2|Bacteria,1RENK@1224|Proteobacteria,2TRK8@28211|Alphaproteobacteria,3JQQR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide	ddpX	-	3.4.13.22	ko:K08641	ko01502,ko02020,map01502,map02020	M00651	-	-	ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504	-	-	-	Peptidase_M15
SX1_k127_956505_10	1297865.APJD01000014_gene457	1.223e-124	400.0	COG0605@1|root,COG0605@2|Bacteria,1MVW2@1224|Proteobacteria,2TU3T@28211|Alphaproteobacteria,3JRQP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	Destroys radicals which are normally produced within the cells and which are toxic to biological systems	sodB	-	1.15.1.1	ko:K04564	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016	-	-	-	ko00000,ko00001,ko01000	-	-	-	Sod_Fe_C,Sod_Fe_N
SX1_k127_956505_13	1297865.APJD01000014_gene458	2.931e-111	368.0	2FDPI@1|root,345QP@2|Bacteria,1NI47@1224|Proteobacteria,2UMY6@28211|Alphaproteobacteria	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_956505_11	1297865.APJD01000014_gene459	1.876e-116	376.0	COG0450@1|root,COG0450@2|Bacteria,1MWPY@1224|Proteobacteria,2TV43@28211|Alphaproteobacteria,3JVQV@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Redoxin	ahpC	-	1.11.1.15	ko:K03386	ko04214,map04214	-	-	-	ko00000,ko00001,ko01000,ko04147	-	-	-	1-cysPrx_C,AhpC-TSA
SX1_k127_956505_16	1297865.APJD01000014_gene460	1.881e-75	258.0	COG0735@1|root,COG0735@2|Bacteria,1RH58@1224|Proteobacteria,2U75R@28211|Alphaproteobacteria	28211|Alphaproteobacteria	K	Belongs to the Fur family	-	-	-	ko:K09826	-	-	-	-	ko00000,ko03000	-	-	-	FUR
SX1_k127_964032_7	1297865.APJD01000018_gene5636	9.099e-71	240.0	COG0810@1|root,COG0810@2|Bacteria,1MZXC@1224|Proteobacteria,2UCBT@28211|Alphaproteobacteria,3JURP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Gram-negative bacterial TonB protein C-terminal	tonB	-	-	ko:K03832	-	-	-	-	ko00000,ko02000	2.C.1.1	-	-	TonB_2,TonB_C
SX1_k127_964032_5	172088.AUGA01000005_gene7748	1.149e-177	559.0	COG0395@1|root,COG0395@2|Bacteria,1N4I0@1224|Proteobacteria,2TT14@28211|Alphaproteobacteria,3JR2J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Binding-protein-dependent transport system inner membrane component	MA20_03550	-	-	ko:K02026	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	BPD_transp_1
SX1_k127_964032_3	1297865.APJD01000018_gene5638	1.94e-207	645.0	COG1175@1|root,COG1175@2|Bacteria,1MWB7@1224|Proteobacteria,2TUAN@28211|Alphaproteobacteria,3JQUC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Binding-protein-dependent transport system inner membrane component	MA20_03545	-	-	ko:K02025	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	BPD_transp_1
SX1_k127_964032_1	1297865.APJD01000018_gene5639	8.093e-291	895.0	COG1653@1|root,COG1653@2|Bacteria,1MU64@1224|Proteobacteria,2TTUB@28211|Alphaproteobacteria,3JT35@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	G	Bacterial extracellular solute-binding protein	-	-	-	ko:K02027	-	M00207	-	-	ko00000,ko00002,ko02000	3.A.1.1	-	-	SBP_bac_1,SBP_bac_8
SX1_k127_964032_2	1230476.C207_06074	2.395e-221	691.0	COG1052@1|root,COG1052@2|Bacteria,1MU2D@1224|Proteobacteria,2TSMN@28211|Alphaproteobacteria,3JS4J@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	CH	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain	MA20_03535	-	1.1.1.29,1.1.1.399,1.1.1.95	ko:K00018,ko:K00058	ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map01230	M00020,M00346	R00717,R01388,R01513	RC00031,RC00042	ko00000,ko00001,ko00002,ko01000,ko04147	-	-	-	2-Hacid_dh,2-Hacid_dh_C
SX1_k127_964032_0	1297865.APJD01000018_gene5641	0.0	1015.0	COG0840@1|root,COG4564@1|root,COG0840@2|Bacteria,COG4564@2|Bacteria,1MU9B@1224|Proteobacteria,2TQR7@28211|Alphaproteobacteria,3JR63@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	histidine kinase HAMP region domain protein	MA20_03530	-	-	ko:K03406	ko02020,ko02030,map02020,map02030	-	-	-	ko00000,ko00001,ko02035	-	-	-	HAMP,MCPsignal,sCache_2
SX1_k127_964032_4	1297865.APJD01000018_gene5642	1.876e-192	603.0	COG3181@1|root,COG3181@2|Bacteria,1MYJX@1224|Proteobacteria,2U07W@28211|Alphaproteobacteria,3JRR6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	ABC transporter substrate-binding protein	MA20_03525	-	-	-	-	-	-	-	-	-	-	-	TctC
SX1_k127_964032_6	1297865.APJD01000018_gene5643	2.797e-77	259.0	2BT3Q@1|root,32N8A@2|Bacteria,1RCBY@1224|Proteobacteria,2U6U8@28211|Alphaproteobacteria,3JYK1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Putative lumazine-binding	-	-	-	-	-	-	-	-	-	-	-	-	Lumazine_bd_2
SX1_k127_970694_0	1297865.APJD01000007_gene1859	5.731e-215	670.0	COG4346@1|root,COG4346@2|Bacteria,1QHX0@1224|Proteobacteria,2TVG5@28211|Alphaproteobacteria,3JT74@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	C-terminal four TMM region of protein-O-mannosyltransferase	-	-	2.4.1.109	ko:K00728	ko00514,ko00515,ko01100,map00514,map00515,map01100	-	R04072,R07620,R11399	RC00005,RC00059,RC00397	ko00000,ko00001,ko01000,ko01003	-	GT39	-	PMT,PMT_2,PMT_4TMC
SX1_k127_970694_3	172088.AUGA01000037_gene3697	1.211e-121	395.0	COG4254@1|root,COG4254@2|Bacteria,1N8ZX@1224|Proteobacteria,2UH3D@28211|Alphaproteobacteria,3JQQN@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	FecR protein	MA20_44920	-	-	-	-	-	-	-	-	-	-	-	FecR
SX1_k127_970694_1	1230476.C207_00276	3.716e-210	658.0	29WMT@1|root,30I8M@2|Bacteria,1MV6X@1224|Proteobacteria,2TW15@28211|Alphaproteobacteria,3JUME@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	MA20_44925	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_970694_2	1230476.C207_00274	1.542e-151	484.0	COG2324@1|root,COG2324@2|Bacteria,1RA24@1224|Proteobacteria,2U67T@28211|Alphaproteobacteria,3JYCK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Carotenoid biosynthesis protein	-	-	-	-	-	-	-	-	-	-	-	-	Caroten_synth
SX1_k127_970694_5	1297865.APJD01000007_gene1854	2.528e-54	196.0	2AIRC@1|root,31984@2|Bacteria,1NEQ3@1224|Proteobacteria,2UH6W@28211|Alphaproteobacteria,3K1EU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_970694_6	1230476.C207_00272	1.014e-52	188.0	2AI63@1|root,318KD@2|Bacteria,1NPDU@1224|Proteobacteria,2UNCK@28211|Alphaproteobacteria,3K1Z1@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	HHH_3
SX1_k127_970694_4	1297865.APJD01000007_gene1852	8.271e-84	278.0	COG1807@1|root,COG1807@2|Bacteria,1QIUU@1224|Proteobacteria,2TWT1@28211|Alphaproteobacteria,3JTS7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Dolichyl-phosphate-mannose-protein mannosyltransferase	-	-	-	-	-	-	-	-	-	-	-	-	PMT_2
SX1_k127_971928_0	1297865.APJD01000011_gene6781	0.0	2266.0	COG0646@1|root,COG1410@1|root,COG0646@2|Bacteria,COG1410@2|Bacteria,1MV6G@1224|Proteobacteria,2TQTG@28211|Alphaproteobacteria,3JUU3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	B12 binding domain	metH	GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0019842,GO:0031419,GO:0032259,GO:0034641,GO:0035999,GO:0036094,GO:0036211,GO:0042084,GO:0042558,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050667,GO:0051186,GO:0071704,GO:0097159,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.1.1.13	ko:K00548	ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230	M00017	R00946,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000	-	-	-	B12-binding,B12-binding_2,Met_synt_B12,Pterin_bind,S-methyl_trans
SX1_k127_971928_4	1297865.APJD01000011_gene6780	1.679e-141	452.0	COG0625@1|root,COG0625@2|Bacteria,1RA4Y@1224|Proteobacteria,2U5B6@28211|Alphaproteobacteria,3JWH3@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	O	Glutathione S-transferase, N-terminal domain	-	-	5.2.1.2	ko:K01800	ko00350,ko00643,ko01100,ko01120,map00350,map00643,map01100,map01120	M00044	R03181	RC00867	ko00000,ko00001,ko00002,ko01000	-	-	-	GST_C,GST_C_2,GST_C_3,GST_N_3
SX1_k127_971928_5	1297865.APJD01000011_gene6779	3.058e-122	392.0	COG3230@1|root,COG3230@2|Bacteria,1MZD9@1224|Proteobacteria,2UERV@28211|Alphaproteobacteria,3JYM2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	heme oxygenase	-	-	1.14.99.58	ko:K07215	ko00860,map00860	-	-	-	ko00000,ko00001,ko01000	-	-	-	Heme_oxygenase
SX1_k127_971928_1	1297865.APJD01000011_gene6778	0.0	1669.0	COG0784@1|root,COG4251@1|root,COG0784@2|Bacteria,COG4251@2|Bacteria,1NC9X@1224|Proteobacteria,2TT77@28211|Alphaproteobacteria,3JVZ7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Phytochrome region	MA20_42395	-	-	-	-	-	-	-	-	-	-	-	GAF,HWE_HK,PAS_2,PAS_3,PHY,Response_reg
SX1_k127_971928_2	1297865.APJD01000011_gene6777	1.797e-232	720.0	COG2215@1|root,COG2215@2|Bacteria,1QDA1@1224|Proteobacteria,2TUN7@28211|Alphaproteobacteria,3JT8Z@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Belongs to the NiCoT transporter (TC 2.A.52) family	-	-	-	ko:K08970	-	-	-	-	ko00000,ko02000	2.A.52.2	-	-	NicO
SX1_k127_971928_7	1297865.APJD01000011_gene6776	1.986e-50	181.0	COG1937@1|root,COG1937@2|Bacteria,1N6ZN@1224|Proteobacteria,2U9SD@28211|Alphaproteobacteria,3JZR7@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Metal-sensitive transcriptional repressor	-	-	-	-	-	-	-	-	-	-	-	-	Trns_repr_metal
SX1_k127_971928_3	1297865.APJD01000011_gene6775	3.647e-208	649.0	COG0598@1|root,COG0598@2|Bacteria,1MXRB@1224|Proteobacteria,2TT8H@28211|Alphaproteobacteria,3JVE8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	P	CorA-like Mg2+ transporter protein	-	-	-	-	-	-	-	-	-	-	-	-	CorA
SX1_k127_971928_6	1297865.APJD01000011_gene6774	4.95e-98	321.0	COG1985@1|root,COG1985@2|Bacteria,1PXWC@1224|Proteobacteria,2TVKP@28211|Alphaproteobacteria,3JRVQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	RibD C-terminal domain	MA20_21040	-	1.1.1.193	ko:K00082	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R03458	RC00933	ko00000,ko00001,ko00002,ko01000	-	-	-	RibD_C
SX1_k127_983020_2	1297865.APJD01000028_gene5186	7.289e-61	212.0	COG0119@1|root,COG0119@2|Bacteria,1MUMX@1224|Proteobacteria,2TT1R@28211|Alphaproteobacteria,3JWVK@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	HMGL-like	-	-	4.1.3.4	ko:K01640	ko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146	M00036,M00088	R01360,R08090	RC00502,RC00503,RC01118,RC01946	ko00000,ko00001,ko00002,ko01000	-	-	-	HMGL-like
SX1_k127_983020_0	1297865.APJD01000028_gene5185	8.166e-263	810.0	COG1804@1|root,COG1804@2|Bacteria,1MU5U@1224|Proteobacteria,2TRIZ@28211|Alphaproteobacteria,3JQU6@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	CoA-transferase family III	-	-	-	-	-	-	-	-	-	-	-	-	CoA_transf_3
SX1_k127_983020_1	1297865.APJD01000028_gene5184	1.693e-190	595.0	COG0583@1|root,COG0583@2|Bacteria,1MXR1@1224|Proteobacteria,2TUU1@28211|Alphaproteobacteria,3JQTH@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	K	Bacterial regulatory helix-turn-helix protein, lysR family	-	-	-	ko:K19338	-	-	-	-	ko00000,ko03000	-	-	-	HTH_1,LysR_substrate
SX1_k127_983020_3	398525.KB900701_gene1514	0.0008002	42.0	COG0477@1|root,COG0477@2|Bacteria,1MXBV@1224|Proteobacteria,2TWZG@28211|Alphaproteobacteria,3JVBD@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	EGP	Sugar (and other) transporter	-	-	-	ko:K08369	-	-	-	-	ko00000,ko02000	2.A.1	-	-	Sugar_tr
SX1_k127_991263_1	1297865.APJD01000026_gene2426	2.784e-193	604.0	COG1234@1|root,COG1234@2|Bacteria,1Q4PW@1224|Proteobacteria,2U2XG@28211|Alphaproteobacteria,3JT7N@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA	rnz	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267	3.1.26.11	ko:K00784	ko03013,map03013	-	-	-	ko00000,ko00001,ko01000,ko03016	-	-	-	Lactamase_B_2
SX1_k127_991263_2	1297865.APJD01000026_gene2427	1.19e-45	167.0	2AIKX@1|root,31936@2|Bacteria,1N2P8@1224|Proteobacteria,2UCRG@28211|Alphaproteobacteria,3K0JG@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SX1_k127_991263_0	1297865.APJD01000026_gene2428	0.0	1895.0	COG1215@1|root,COG5309@1|root,COG1215@2|Bacteria,COG5309@2|Bacteria,1MWF8@1224|Proteobacteria,2VEZT@28211|Alphaproteobacteria,3JTNP@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	M	Glycosyl transferase family 21	MA20_12920	-	2.4.1.12,3.2.1.58	ko:K00694,ko:K01210	ko00500,ko01100,ko02026,map00500,map01100,map02026	-	R00308,R02889,R03115	RC00005,RC00467	ko00000,ko00001,ko01000,ko01003,ko02000	4.D.3.1.2,4.D.3.1.5,4.D.3.1.6	GT2	-	Glyco_hydro_17,Glyco_tranf_2_3,Glyco_trans_2_3
SX1_k127_997710_9	1297865.APJD01000028_gene5267	3.532e-108	350.0	COG0667@1|root,COG0667@2|Bacteria,1MVEH@1224|Proteobacteria,2TRHS@28211|Alphaproteobacteria,3JVP4@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	C	Aldo keto reductase	-	-	1.1.1.65	ko:K05275	ko00750,ko01100,ko01120,map00750,map01100,map01120	-	R01708	RC00116	ko00000,ko00001,ko01000	-	-	-	Aldo_ket_red
SX1_k127_997710_6	1297865.APJD01000028_gene5266	1.24e-168	531.0	COG0476@1|root,COG0476@2|Bacteria,1MW7H@1224|Proteobacteria,2TRWY@28211|Alphaproteobacteria,3JQSR@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	ThiF family	moeB	-	2.7.7.80	ko:K21029	ko04122,map04122	-	R07459	RC00043	ko00000,ko00001,ko01000	-	-	-	ThiF
SX1_k127_997710_3	1297865.APJD01000028_gene5265	2.442e-277	856.0	COG0265@1|root,COG3409@1|root,COG0265@2|Bacteria,COG3409@2|Bacteria,1MV63@1224|Proteobacteria,2TU13@28211|Alphaproteobacteria,3JUXT@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	MO	Putative peptidoglycan binding domain	-	-	-	-	-	-	-	-	-	-	-	-	PG_binding_1,SPOR,Trypsin_2
SX1_k127_997710_0	1297865.APJD01000028_gene5264	0.0	1146.0	COG0405@1|root,COG0405@2|Bacteria,1MUV6@1224|Proteobacteria,2TR49@28211|Alphaproteobacteria,3JTD9@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	E	Gamma-glutamyltranspeptidase	MA20_24045	-	2.3.2.2,3.4.19.13	ko:K00681	ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100	-	R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935	RC00064,RC00090,RC00096	ko00000,ko00001,ko01000,ko01002	-	-	-	G_glu_transpept
SX1_k127_997710_8	1297865.APJD01000028_gene5263	1.649e-123	398.0	COG1670@1|root,COG1670@2|Bacteria,1RE40@1224|Proteobacteria,2TSJ6@28211|Alphaproteobacteria,3JUSX@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	J	Acetyltransferase (GNAT) domain	-	-	-	-	-	-	-	-	-	-	-	-	Acetyltransf_3
SX1_k127_997710_4	1297865.APJD01000028_gene5262	6.543e-194	604.0	COG0266@1|root,COG0266@2|Bacteria,1MVM5@1224|Proteobacteria,2TS4C@28211|Alphaproteobacteria,3JRJ8@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	L	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates	fpg	-	3.2.2.23,4.2.99.18	ko:K10563	ko03410,map03410	-	-	-	ko00000,ko00001,ko01000,ko03400	-	-	-	Fapy_DNA_glyco,H2TH,zf-FPG_IleRS
SX1_k127_997710_7	1297865.APJD01000028_gene5261	2.464e-165	520.0	COG0500@1|root,COG2226@2|Bacteria,1MX8I@1224|Proteobacteria,2TRWR@28211|Alphaproteobacteria,3JTSU@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2)	ubiE	-	2.1.1.163,2.1.1.201	ko:K03183	ko00130,ko01100,ko01110,map00130,map01100,map01110	M00116,M00117	R04990,R04993,R06859,R08774,R09736	RC00003,RC01253,RC01662	ko00000,ko00001,ko00002,ko01000	-	-	-	Ubie_methyltran
SX1_k127_997710_1	1297865.APJD01000028_gene5260	0.0	1019.0	COG0661@1|root,COG0661@2|Bacteria,1MU1Z@1224|Proteobacteria,2TS87@28211|Alphaproteobacteria,3JQV2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	S	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis	ubiB	-	-	ko:K03688	-	-	-	-	ko00000	-	-	-	ABC1
SX1_k127_997710_2	1297865.APJD01000028_gene5259	1.157e-296	912.0	COG0452@1|root,COG0452@2|Bacteria,1MVQP@1224|Proteobacteria,2TRN1@28211|Alphaproteobacteria,3JSH2@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	H	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine	coaBC	-	4.1.1.36,6.3.2.5	ko:K13038,ko:K21977	ko00770,ko01100,map00770,map01100	M00120	R03269,R04231	RC00064,RC00090,RC00822	ko00000,ko00001,ko00002,ko01000	-	-	-	DFP,Flavoprotein
SX1_k127_997710_10	1297865.APJD01000028_gene5258	8.867e-88	297.0	COG0756@1|root,COG0756@2|Bacteria,1RA7P@1224|Proteobacteria,2U7B5@28211|Alphaproteobacteria,3JYQC@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	F	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	dut	GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576	3.6.1.23	ko:K01520	ko00240,ko00983,ko01100,map00240,map00983,map01100	M00053	R02100,R11896	RC00002	ko00000,ko00001,ko00002,ko01000,ko03400	-	-	-	dUTPase
SX1_k127_997710_5	1297865.APJD01000028_gene5257	2.634e-193	610.0	COG0642@1|root,COG2205@2|Bacteria,1MVY8@1224|Proteobacteria,2TS5B@28211|Alphaproteobacteria,3JTRQ@41294|Bradyrhizobiaceae	28211|Alphaproteobacteria	T	Histidine kinase	divL	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	-	-	-	-	-	-	-	-	-	-	HATPase_c,HisKA,PAS_7,PAS_8
## 6559 queries scanned
## Total time (seconds): 96.39135909080505
## Rate: 68.05 q/s