## Mon Mar 17 15:46:47 2025 ## emapper-2.1.9 ## /home/zhangkaihang/.conda/envs/eggnog-mapper/bin/emapper.py -i /home/zhangkaihang/metadata_analysis/metawrap/paddysoil/4paddy/bin4gtdbtk/WXD2_bin.17.fa -m mmseqs --itype genome -o WXD2_bin.17 --output_dir /home/zhangkaihang/metadata_analysis/eggnog-mapper/paddysoil/4paddy/WXD2_bin.17 --cpu 8 ## #query seed_ortholog evalue score eggNOG_OGs max_annot_lvl COG_category Description Preferred_name GOs EC KEGG_ko KEGG_Pathway KEGG_Module KEGG_Reaction KEGG_rclass BRITE KEGG_TC CAZy BiGG_Reaction PFAMs WXD2_k127_1004112_2 1173028.ANKO01000140_gene631 4.924e-23 117.0 COG0642@1|root,COG2203@1|root,COG5002@1|root,COG2203@2|Bacteria,COG2205@2|Bacteria,COG5002@2|Bacteria,1G13T@1117|Cyanobacteria,1H77Q@1150|Oscillatoriales 1117|Cyanobacteria T Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - - - - - - - - - - GAF_2,HATPase_c,HisKA,PAS,PAS_8,PAS_9,Response_reg WXD2_k127_1004112_0 865937.Gilli_2331 5.752e-95 348.0 COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,1I0JH@117743|Flavobacteriia,2P7C3@244698|Gillisia 976|Bacteroidetes T COGs COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system - - - - - - - - - - - - 7TMR-DISMED2,7TMR-DISM_7TM,HATPase_c,HisKA,Reg_prop,Y_Y_Y WXD2_k127_1004112_1 326427.Cagg_2419 2.19e-33 143.0 COG0664@1|root,COG2172@1|root,COG2208@1|root,COG0664@2|Bacteria,COG2172@2|Bacteria,COG2208@2|Bacteria,2G790@200795|Chloroflexi,376A8@32061|Chloroflexia 32061|Chloroflexia KT SMART protein phosphatase 2C domain protein - - - - - - - - - - - - HATPase_c_2,SpoIIE,cNMP_binding WXD2_k127_1011643_0 1089550.ATTH01000001_gene2284 2.788e-78 294.0 COG2373@1|root,COG2373@2|Bacteria,4NEW9@976|Bacteroidetes 976|Bacteroidetes S Large extracellular alpha-helical protein - - - ko:K06894 - - - - ko00000 - - - A2M,A2M_N,A2M_N_2,A2M_comp,MG1,Thiol-ester_cl WXD2_k127_1016191_0 1267534.KB906756_gene69 5.658e-87 293.0 COG0517@1|root,COG0794@1|root,COG0517@2|Bacteria,COG0794@2|Bacteria,3Y4I2@57723|Acidobacteria,2JIKP@204432|Acidobacteriia 204432|Acidobacteriia M Belongs to the SIS family. GutQ KpsF subfamily - - 5.3.1.13 ko:K06041 ko00540,ko01100,map00540,map01100 M00063 R01530 RC00541 ko00000,ko00001,ko00002,ko01000,ko01005 - - - CBS,SIS WXD2_k127_1016191_3 1267534.KB906756_gene181 4.826e-16 89.0 COG2834@1|root,COG2834@2|Bacteria,3Y4XE@57723|Acidobacteria,2JJK4@204432|Acidobacteriia 204432|Acidobacteriia M outer membrane lipoprotein carrier protein LolA - - - ko:K03634 - - - - ko00000 - - - LolA WXD2_k127_1016191_2 871968.DESME_05910 5.231e-56 205.0 COG1666@1|root,COG1666@2|Bacteria,1V3UR@1239|Firmicutes,24HUX@186801|Clostridia,261V6@186807|Peptococcaceae 186801|Clostridia S Belongs to the UPF0234 family - - - ko:K09767 - - - - ko00000 - - - DUF520 WXD2_k127_1016191_1 1125863.JAFN01000001_gene236 1.803e-78 278.0 COG0142@1|root,COG0142@2|Bacteria,1MUK6@1224|Proteobacteria,42M1B@68525|delta/epsilon subdivisions,2WK2M@28221|Deltaproteobacteria 28221|Deltaproteobacteria H Belongs to the FPP GGPP synthase family ispB - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 ko:K02523,ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00364,M00366 R01658,R02003,R02061,R09248 RC00279 ko00000,ko00001,ko00002,ko01000,ko01006 - - - polyprenyl_synt WXD2_k127_1026997_3 649349.Lbys_2700 7.611e-06 51.0 2C95S@1|root,335BQ@2|Bacteria,4NVV0@976|Bacteroidetes,47RV0@768503|Cytophagia 976|Bacteroidetes S Domain of unknown function (DUF4177) - - - - - - - - - - - - DUF4177 WXD2_k127_1026997_1 269797.Mbar_A1223 1.52e-155 506.0 COG0696@1|root,arCOG03068@2157|Archaea,2XTUA@28890|Euryarchaeota,2NA9Z@224756|Methanomicrobia 224756|Methanomicrobia G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate gpmI - 5.4.2.12 ko:K15633 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000 - - - Metalloenzyme,Phosphodiest,iPGM_N WXD2_k127_1026997_2 469371.Tbis_2311 1.056e-23 117.0 COG0328@1|root,COG0406@1|root,COG0328@2|Bacteria,COG0406@2|Bacteria,2GJ9R@201174|Actinobacteria,4E04U@85010|Pseudonocardiales 201174|Actinobacteria GL phosphoglycerate mutase rnhA GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005488,GO:0006139,GO:0006401,GO:0006725,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016891,GO:0016893,GO:0017144,GO:0018130,GO:0019438,GO:0019439,GO:0032296,GO:0033013,GO:0033014,GO:0034641,GO:0034655,GO:0042364,GO:0042578,GO:0043170,GO:0043755,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046700,GO:0051186,GO:0051188,GO:0071667,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 3.1.26.4,3.1.3.73 ko:K02226,ko:K22316 ko00860,ko01100,ko03030,map00860,map01100,map03030 M00122 R04594,R11173 RC00017 ko00000,ko00001,ko00002,ko01000,ko03032 - - - His_Phos_1,RVT_3 WXD2_k127_1026997_0 1267535.KB906767_gene1458 2.659e-190 616.0 COG0018@1|root,COG0018@2|Bacteria,3Y35R@57723|Acidobacteria,2JIAM@204432|Acidobacteriia 204432|Acidobacteriia J Belongs to the class-I aminoacyl-tRNA synthetase family - - 6.1.1.19 ko:K01887 ko00970,map00970 M00359,M00360 R03646 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - Arg_tRNA_synt_N,DALR_1,tRNA-synt_1d WXD2_k127_1028489_2 1122137.AQXF01000004_gene1736 5.861e-56 199.0 COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,1MX41@1224|Proteobacteria,2VEZ1@28211|Alphaproteobacteria 28211|Alphaproteobacteria M Tricorn protease C1 domain - - - ko:K08676 - - - - ko00000,ko01000,ko01002 - - - PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ WXD2_k127_1028489_1 518766.Rmar_0925 2.384e-101 349.0 COG1472@1|root,COG1680@1|root,COG1472@2|Bacteria,COG1680@2|Bacteria,4NET8@976|Bacteroidetes,1FJ9E@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes G Glycosyl hydrolase family 3 N terminal domain - - 3.2.1.52 ko:K01207 ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501 M00628 R00022,R05963,R07809,R07810,R10831 RC00049 ko00000,ko00001,ko00002,ko01000 - - - Beta-lactamase,Glyco_hydro_3,Glyco_hydro_3_C WXD2_k127_1028489_3 867845.KI911784_gene1838 1.184e-54 201.0 COG0596@1|root,COG0596@2|Bacteria,2G8JV@200795|Chloroflexi 200795|Chloroflexi S Ndr family - - - - - - - - - - - - Abhydrolase_1 WXD2_k127_1028489_0 215803.DB30_6948 4.888e-227 715.0 COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,42MF6@68525|delta/epsilon subdivisions,2WJ8D@28221|Deltaproteobacteria,2YX7V@29|Myxococcales 28221|Deltaproteobacteria V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran WXD2_k127_1032428_2 1444309.JAQG01000157_gene3236 1.469e-114 384.0 COG1253@1|root,COG1253@2|Bacteria,1TPN0@1239|Firmicutes,4H9SB@91061|Bacilli,26QIQ@186822|Paenibacillaceae 91061|Bacilli S Hemolysins and related proteins containing CBS domains corC1 - - - - - - - - - - - CBS,CorC_HlyC,DUF21 WXD2_k127_1032428_3 1382356.JQMP01000004_gene301 3.536e-92 323.0 COG0128@1|root,COG0128@2|Bacteria,2G6S6@200795|Chloroflexi,27Y0N@189775|Thermomicrobia 189775|Thermomicrobia E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate aroA - 2.5.1.19 ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R03460 RC00350 ko00000,ko00001,ko00002,ko01000 - - - EPSP_synthase WXD2_k127_1032428_7 1382356.JQMP01000003_gene2030 6.729e-75 263.0 COG1235@1|root,COG1235@2|Bacteria,2G8BU@200795|Chloroflexi,27Y03@189775|Thermomicrobia 189775|Thermomicrobia S Metallo-beta-lactamase superfamily - - 3.1.4.55 ko:K06167 ko00440,map00440 - R10205 RC00296 ko00000,ko00001,ko01000 - - - Lactamase_B_2 WXD2_k127_1032428_11 1499967.BAYZ01000186_gene3960 5.94e-26 121.0 COG2908@1|root,COG2908@2|Bacteria,2NPKW@2323|unclassified Bacteria 2|Bacteria S Calcineurin-like phosphoesterase lpxH GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0019897,GO:0019898,GO:0030145,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.54 ko:K03269 ko00540,ko01100,map00540,map01100 M00060 R04549 RC00002 ko00000,ko00001,ko00002,ko01000,ko01005 - - iE2348C_1286.E2348C_0457 Metallophos,Metallophos_2 WXD2_k127_1032428_12 1089553.Tph_c13460 6.073e-14 80.0 COG2110@1|root,COG2110@2|Bacteria,1TPCU@1239|Firmicutes,24ARG@186801|Clostridia,42GU1@68295|Thermoanaerobacterales 186801|Clostridia S PFAM Appr-1-p processing domain protein ymdB - - - - - - - - - - - Macro WXD2_k127_1032428_8 1238186.AOCN01000015_gene1049 1.997e-64 235.0 COG0484@1|root,COG0484@2|Bacteria,2GJKK@201174|Actinobacteria,4FM9B@85023|Microbacteriaceae 201174|Actinobacteria O DnaJ molecular chaperone homology domain dnaJ GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0010468,GO:0016020,GO:0019222,GO:0030312,GO:0040007,GO:0043388,GO:0044093,GO:0044464,GO:0050789,GO:0051098,GO:0051099,GO:0051101,GO:0060255,GO:0065007,GO:0065009,GO:0071944,GO:2000677,GO:2000679 - ko:K03686,ko:K05516 - - - - ko00000,ko03029,ko03036,ko03110 - - - DnaJ,DnaJ_C,DnaJ_CXXCXGXG WXD2_k127_1032428_0 404589.Anae109_0101 2.702e-152 494.0 COG0448@1|root,COG0448@2|Bacteria,1MVTC@1224|Proteobacteria,42NGK@68525|delta/epsilon subdivisions,2WM29@28221|Deltaproteobacteria,2YU1M@29|Myxococcales 28221|Deltaproteobacteria H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans glgC - 2.7.7.27 ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 M00565 R00948 RC00002 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_2768 NTP_transferase WXD2_k127_1032428_5 358681.BBR47_17900 2.487e-89 319.0 COG0689@1|root,COG0689@2|Bacteria,1TQM3@1239|Firmicutes,4HBH3@91061|Bacilli,26RZT@186822|Paenibacillaceae 91061|Bacilli J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates rph GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043170,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 ko:K00989 - - - - ko00000,ko01000,ko03016 - - - Ham1p_like,RNase_PH,RNase_PH_C WXD2_k127_1032428_14 194439.CT2205 6.104e-07 63.0 COG4485@1|root,COG4485@2|Bacteria,1FFQB@1090|Chlorobi 1090|Chlorobi S Bacterial membrane protein, YfhO - - - - - - - - - - - - - WXD2_k127_1032428_13 756272.Plabr_2323 4.881e-11 76.0 COG4485@1|root,COG4485@2|Bacteria,2J0MH@203682|Planctomycetes 203682|Planctomycetes S Bacterial membrane protein, YfhO - - - - - - - - - - - - YfhO WXD2_k127_1032428_10 67315.JOBD01000039_gene4842 1.223e-27 121.0 COG0287@1|root,COG0287@2|Bacteria,2GKB4@201174|Actinobacteria 201174|Actinobacteria E Prephenate dehydrogenase tyrA - 1.3.1.12 ko:K04517 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 M00025 R01728 RC00125 ko00000,ko00001,ko00002,ko01000 - - - PDH WXD2_k127_1032428_9 522772.Dacet_2428 4.111e-44 164.0 COG0346@1|root,COG0346@2|Bacteria,2GFMK@200930|Deferribacteres 200930|Deferribacteres E Glyoxalase-like domain - - 5.1.99.1 ko:K05606 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00373,M00375,M00376,M00741 R02765,R09979 RC00780,RC02739 ko00000,ko00001,ko00002,ko01000 - - - Glyoxalase_4 WXD2_k127_1032428_6 330214.NIDE0244 9.826e-86 294.0 COG0602@1|root,COG0602@2|Bacteria,3J0M2@40117|Nitrospirae 40117|Nitrospirae H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds queE - 4.3.99.3 ko:K10026 ko00790,ko01100,map00790,map01100 - R10002 RC02989 ko00000,ko00001,ko01000,ko03016 - - - Fer4_14,Radical_SAM WXD2_k127_1032428_4 1125863.JAFN01000001_gene2317 2.414e-90 304.0 COG0603@1|root,COG0603@2|Bacteria,1MU5V@1224|Proteobacteria,42MKZ@68525|delta/epsilon subdivisions,2WING@28221|Deltaproteobacteria 28221|Deltaproteobacteria F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) queC - 6.3.4.20 ko:K06920 ko00790,ko01100,map00790,map01100 - R09978 RC00959 ko00000,ko00001,ko01000,ko03016 - - iAF987.Gmet_3075 QueC WXD2_k127_1032428_1 1278073.MYSTI_06301 1.522e-122 410.0 COG0213@1|root,COG0213@2|Bacteria,1MV3H@1224|Proteobacteria,42PCD@68525|delta/epsilon subdivisions,2WKGQ@28221|Deltaproteobacteria,2YU9M@29|Myxococcales 28221|Deltaproteobacteria F The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis pdp - 2.4.2.2,2.4.2.4 ko:K00756,ko:K00758 ko00240,ko00983,ko01100,ko05219,map00240,map00983,map01100,map05219 - R01570,R01876,R02296,R02484,R08222,R08230 RC00063 ko00000,ko00001,ko01000 - - - Glycos_trans_3N,Glycos_transf_3,PYNP_C WXD2_k127_1036165_0 983545.Glaag_4055 2.478e-88 308.0 COG1619@1|root,COG1619@2|Bacteria,1MWIY@1224|Proteobacteria,1RQT8@1236|Gammaproteobacteria,466EE@72275|Alteromonadaceae 1236|Gammaproteobacteria V LD-carboxypeptidase ldcA GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009050,GO:0009056,GO:0009254,GO:0009987,GO:0016787,GO:0019538,GO:0030203,GO:0034641,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.4.17.13 ko:K01297 - - - - ko00000,ko01000,ko01002,ko01011 - - iAPECO1_1312.APECO1_304,iECABU_c1320.ECABU_c14580,iECED1_1282.ECED1_1334,iECOK1_1307.ECOK1_1338,iECS88_1305.ECS88_1255,iLF82_1304.LF82_1171,iNRG857_1313.NRG857_06085,iSFV_1184.SFV_1201,iSFxv_1172.SFxv_1357,iS_1188.S1271,iUMN146_1321.UM146_11125,iUTI89_1310.UTI89_C1378,ic_1306.c1641 Peptidase_S66 WXD2_k127_1036165_4 313603.FB2170_14023 1.825e-07 62.0 2CEFN@1|root,2ZQR3@2|Bacteria,4P7C1@976|Bacteroidetes,1IBIX@117743|Flavobacteriia 976|Bacteroidetes - - - - - - - - - - - - - - - WXD2_k127_1036165_1 886293.Sinac_0489 9.428e-73 255.0 COG2367@1|root,COG2367@2|Bacteria 2|Bacteria V Beta-lactamase - - 3.4.11.2,3.5.2.6 ko:K01256,ko:K17836 ko00311,ko00480,ko01100,ko01130,ko01501,map00311,map00480,map01100,map01130,map01501 M00627,M00628 R00899,R04951,R06363 RC00096,RC00141,RC01499 ko00000,ko00001,ko00002,ko01000,ko01002,ko01504 - - - Beta-lactamase,Beta-lactamase2 WXD2_k127_1036165_3 1185876.BN8_03082 3.519e-08 64.0 29XWU@1|root,30JP9@2|Bacteria,4NNWG@976|Bacteroidetes,47PSI@768503|Cytophagia 976|Bacteroidetes - - - - - - - - - - - - - - - WXD2_k127_1040843_3 1040989.AWZU01000054_gene3481 8.966e-48 182.0 28JIP@1|root,2Z82C@2|Bacteria,1R5N9@1224|Proteobacteria,2U42A@28211|Alphaproteobacteria,3JTWI@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria S S1/P1 Nuclease - - - - - - - - - - - - S1-P1_nuclease WXD2_k127_1040843_0 264462.Bd3810 6.921e-156 501.0 COG0045@1|root,COG0045@2|Bacteria,1MVCE@1224|Proteobacteria,42M5K@68525|delta/epsilon subdivisions,2MSP8@213481|Bdellovibrionales,2WJTS@28221|Deltaproteobacteria 213481|Bdellovibrionales F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit sucC - 6.2.1.5 ko:K01903 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00173,M00374,M00620 R00405,R02404 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_2261 ATP-grasp_2,Ligase_CoA WXD2_k127_1040843_1 553217.ENHAE0001_1599 2.671e-106 356.0 COG0074@1|root,COG0074@2|Bacteria,1MUGA@1224|Proteobacteria,1RM7Y@1236|Gammaproteobacteria,3NKDR@468|Moraxellaceae 1236|Gammaproteobacteria C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit sucD - 6.2.1.5 ko:K01902 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00173,M00374,M00620 R00405,R02404 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000 - - - CoA_binding,Ligase_CoA WXD2_k127_1040843_2 1379270.AUXF01000001_gene2605 5.558e-76 267.0 COG0613@1|root,COG0613@2|Bacteria 2|Bacteria Q PHP domain protein - - - - - - - - - - - - - WXD2_k127_1044251_7 1123242.JH636436_gene247 1.812e-18 86.0 COG4409@1|root,COG4409@2|Bacteria,2J1QW@203682|Planctomycetes 203682|Planctomycetes M BNR repeat-like domain - - - - - - - - - - - - BNR_2 WXD2_k127_1044251_3 592015.HMPREF1705_01104 6.566e-78 272.0 COG1694@1|root,COG3956@2|Bacteria,3TAH9@508458|Synergistetes 508458|Synergistetes S TIGRFAM MazG family protein - - 3.6.1.66,3.6.1.9 ko:K02428,ko:K02499,ko:K04765 ko00230,ko00240,ko00760,ko00770,ko01100,map00230,map00240,map00760,map00770,map01100 - R00086,R00087,R00103,R00287,R00426,R00515,R00662,R00720,R01855,R02100,R02720,R03004,R03036,R03531,R11323 RC00002 ko00000,ko00001,ko01000,ko03036 - - - MazG WXD2_k127_1044251_8 1121354.AQUV01000002_gene718 1.373e-13 74.0 COG0759@1|root,COG0759@2|Bacteria,2GQZG@201174|Actinobacteria,22PAT@1653|Corynebacteriaceae 201174|Actinobacteria S Could be involved in insertion of integral membrane proteins into the membrane ytjA - - ko:K08998 - - - - ko00000 - - - Haemolytic WXD2_k127_1044251_4 243164.DET0935 7.128e-77 265.0 COG0177@1|root,COG0177@2|Bacteria,2G6A1@200795|Chloroflexi,34D9Y@301297|Dehalococcoidia 301297|Dehalococcoidia L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate nth - 4.2.99.18 ko:K10773 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - EndIII_4Fe-2S,HhH-GPD WXD2_k127_1044251_0 555079.Toce_1475 1.886e-259 809.0 COG2987@1|root,COG2987@2|Bacteria,1TPZ9@1239|Firmicutes,247YS@186801|Clostridia,42FI5@68295|Thermoanaerobacterales 186801|Clostridia E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate hutU - 4.2.1.49 ko:K01712 ko00340,ko01100,map00340,map01100 M00045 R02914 RC00804 ko00000,ko00001,ko00002,ko01000 - - - Urocanase,Urocanase_C,Urocanase_N WXD2_k127_1044251_5 1056512.D515_04309 5.469e-75 282.0 COG1398@1|root,COG1398@2|Bacteria,1N2MA@1224|Proteobacteria,1RM88@1236|Gammaproteobacteria,1XSEJ@135623|Vibrionales 135623|Vibrionales I desaturase - - 1.14.19.1 ko:K00507 ko01040,ko01212,ko03320,ko04152,ko04212,map01040,map01212,map03320,map04152,map04212 - R02222 RC00917 ko00000,ko00001,ko01000,ko01004 - - - FA_desaturase WXD2_k127_1044251_1 1121920.AUAU01000006_gene254 2.736e-203 641.0 COG2403@1|root,COG2403@2|Bacteria,3Y6GM@57723|Acidobacteria 57723|Acidobacteria S cyclic 2,3-diphosphoglycerate synthetase activity - - - - - - - - - - - - - WXD2_k127_1044251_2 251221.35214309 1.931e-107 379.0 COG0642@1|root,COG2205@2|Bacteria,1G09B@1117|Cyanobacteria 1117|Cyanobacteria T Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - - - - - - - - - - GAF_2,HATPase_c,HisKA,PAS_3,PAS_4 WXD2_k127_1044251_6 1054213.HMPREF9946_00676 3.592e-34 136.0 COG0204@1|root,COG0204@2|Bacteria 2|Bacteria I Acyl-transferase - - 2.3.1.51,6.2.1.3 ko:K00655,ko:K01897 ko00061,ko00071,ko00561,ko00564,ko01100,ko01110,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map00561,map00564,map01100,map01110,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086,M00089 R01280,R02241,R09381 RC00004,RC00014,RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding,AMP-binding_C,Acyltransferase,NAD_binding_4,PP-binding,Sterile WXD2_k127_1055417_1 1123508.JH636453_gene5800 1.331e-19 104.0 COG3391@1|root,COG3391@2|Bacteria,2J08H@203682|Planctomycetes 203682|Planctomycetes J Integrin alpha (beta-propellor repeats). - - - - - - - - - - - - VCBS WXD2_k127_1055417_0 32057.KB217478_gene907 1.111e-28 125.0 COG1682@1|root,COG1682@2|Bacteria,1G0IN@1117|Cyanobacteria,1HKMP@1161|Nostocales 1117|Cyanobacteria GM Transport permease protein - - - ko:K09690 ko02010,map02010 M00250 - - ko00000,ko00001,ko00002,ko02000 3.A.1.103 - - ABC2_membrane WXD2_k127_1055417_2 1340434.AXVA01000005_gene4820 1.618e-07 57.0 COG1396@1|root,COG1396@2|Bacteria,1VK84@1239|Firmicutes 1239|Firmicutes K Transcriptional - - - - - - - - - - - - HTH_19,HTH_3 WXD2_k127_1058050_0 269799.Gmet_0620 2.593e-230 729.0 COG0086@1|root,COG0086@2|Bacteria,1MU3M@1224|Proteobacteria,42NAW@68525|delta/epsilon subdivisions,2WISU@28221|Deltaproteobacteria,43UIG@69541|Desulfuromonadales 28221|Deltaproteobacteria K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates rpoC - 2.7.7.6 ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 - - - RNA_pol_Rpb1_1,RNA_pol_Rpb1_2,RNA_pol_Rpb1_3,RNA_pol_Rpb1_4,RNA_pol_Rpb1_5 WXD2_k127_1058050_1 1123508.JH636451_gene6014 5.616e-128 420.0 COG4974@1|root,COG4974@2|Bacteria,2IZG8@203682|Planctomycetes 203682|Planctomycetes L Phage integrase, N-terminal SAM-like domain - - - - - - - - - - - - Phage_int_SAM_4,Phage_integrase WXD2_k127_105903_1 404589.Anae109_4110 3.52e-132 428.0 COG0243@1|root,COG0243@2|Bacteria,1NR6J@1224|Proteobacteria,43BMM@68525|delta/epsilon subdivisions,2X64M@28221|Deltaproteobacteria 28221|Deltaproteobacteria C Molydopterin dinucleotide binding domain - - 1.8.5.5 ko:K08352 ko00920,ko01120,map00920,map01120 - R10149 RC02823 ko00000,ko00001,ko01000,ko02000 5.A.3.5 - - Molybdopterin,Molydop_binding WXD2_k127_105903_0 404589.Anae109_4112 1.276e-159 514.0 COG3829@1|root,COG3829@2|Bacteria,1NU8B@1224|Proteobacteria,42MFH@68525|delta/epsilon subdivisions,2WIRW@28221|Deltaproteobacteria 28221|Deltaproteobacteria KT PFAM sigma-54 factor interaction domain-containing protein - - - - - - - - - - - - HTH_8,PAS_9,Sigma54_activat WXD2_k127_105903_5 525904.Tter_2724 3.522e-37 144.0 COG3439@1|root,COG3439@2|Bacteria,2NPV1@2323|unclassified Bacteria 2|Bacteria S Domain of unknown function DUF302 - - - - - - - - - - - - DUF302 WXD2_k127_105903_4 335543.Sfum_3743 3.972e-55 208.0 COG4591@1|root,COG4591@2|Bacteria,1MVV7@1224|Proteobacteria,42MV0@68525|delta/epsilon subdivisions,2WITK@28221|Deltaproteobacteria,2MQRN@213462|Syntrophobacterales 28221|Deltaproteobacteria M TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family lolC - - ko:K09808 ko02010,map02010 M00255 - - ko00000,ko00001,ko00002,ko02000 3.A.1.125 - - FtsX,MacB_PCD WXD2_k127_105903_3 1330700.JQNC01000003_gene1638 1.276e-78 276.0 COG0436@1|root,COG0436@2|Bacteria,1WIMB@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus E aminotransferase class I and II - - 2.6.1.1 ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 - R00355,R00694,R00734,R00896,R02433,R02619,R05052 RC00006 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 WXD2_k127_105903_7 45130.XP_007700719.1 0.000248 52.0 COG0457@1|root,KOG1126@2759|Eukaryota,38DG8@33154|Opisthokonta,3NW4C@4751|Fungi,3QK37@4890|Ascomycota,1ZZQ1@147541|Dothideomycetes,4KEK3@92860|Pleosporales 4751|Fungi D Anaphase-promoting complex, cyclosome, subunit 3 CDC27 GO:0000070,GO:0000151,GO:0000152,GO:0000278,GO:0000280,GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005680,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006996,GO:0007049,GO:0007050,GO:0007059,GO:0007088,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009896,GO:0009987,GO:0010498,GO:0010564,GO:0010638,GO:0010965,GO:0016043,GO:0016567,GO:0019538,GO:0019941,GO:0022402,GO:0030071,GO:0030163,GO:0031145,GO:0031331,GO:0031461,GO:0031974,GO:0031981,GO:0032270,GO:0032436,GO:0032446,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034399,GO:0036211,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045732,GO:0045786,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045930,GO:0045931,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051247,GO:0051276,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0062033,GO:0065007,GO:0070013,GO:0070647,GO:0071704,GO:0071840,GO:0071849,GO:0071850,GO:0071851,GO:0090068,GO:0097159,GO:0098813,GO:0140014,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903047,GO:1903052,GO:1903364,GO:1905818,GO:1905820,GO:1990234,GO:2001252 - ko:K03350 ko04110,ko04111,ko04113,ko04114,ko04120,ko04914,ko05166,map04110,map04111,map04113,map04114,map04120,map04914,map05166 M00389 - - ko00000,ko00001,ko00002,ko01009,ko03036,ko04121 - - - ANAPC3,TPR_1,TPR_16,TPR_19,TPR_2,TPR_8 WXD2_k127_105903_6 404589.Anae109_0016 1.21e-08 64.0 COG3266@1|root,COG3266@2|Bacteria,1N9VA@1224|Proteobacteria,42VXQ@68525|delta/epsilon subdivisions,2WSBF@28221|Deltaproteobacteria 28221|Deltaproteobacteria S domain, Protein - - - - - - - - - - - - - WXD2_k127_105903_2 1238182.C882_0684 1.375e-104 355.0 COG1921@1|root,COG1921@2|Bacteria,1MWXI@1224|Proteobacteria,2TTBH@28211|Alphaproteobacteria,2JRMS@204441|Rhodospirillales 204441|Rhodospirillales E L-seryl-tRNA selenium transferase selA - 2.9.1.1 ko:K01042 ko00450,ko00970,map00450,map00970 - R08219 RC01246 ko00000,ko00001,ko01000 - - - Se-cys_synth_N,SelA WXD2_k127_1059726_2 404589.Anae109_0076 1.67e-48 183.0 COG2071@1|root,COG2071@2|Bacteria,1MV8E@1224|Proteobacteria,43B6K@68525|delta/epsilon subdivisions,2X6K5@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Peptidase C26 - - - ko:K07010 - - - - ko00000,ko01002 - - - Peptidase_C26 WXD2_k127_1059726_5 1303518.CCALI_02307 2.86e-16 89.0 COG4232@1|root,COG4232@2|Bacteria 2|Bacteria CO protein-disulfide reductase activity - - - - - - - - - - - - TPR_6,Thioredoxin_7 WXD2_k127_1059726_0 945713.IALB_1500 4.147e-103 357.0 COG4232@1|root,COG4232@2|Bacteria 2|Bacteria CO protein-disulfide reductase activity dsbD - 1.8.1.8 ko:K04084,ko:K06196 - - - - ko00000,ko01000,ko02000,ko03110 5.A.1.1,5.A.1.2 - - DsbC,DsbD,Thioredoxin,Thioredoxin_2,Thioredoxin_7 WXD2_k127_1059726_4 1121013.P873_06430 2.861e-18 99.0 COG1534@1|root,COG1534@2|Bacteria,1N8K5@1224|Proteobacteria,1SDIM@1236|Gammaproteobacteria,1X7GX@135614|Xanthomonadales 135614|Xanthomonadales J RNA-binding protein - - - ko:K07574 - - - - ko00000,ko03009 - - - CRS1_YhbY WXD2_k127_1059726_3 589865.DaAHT2_0960 9.264e-39 161.0 COG0726@1|root,COG0726@2|Bacteria,1MWR2@1224|Proteobacteria,42PMY@68525|delta/epsilon subdivisions,2WPU5@28221|Deltaproteobacteria,2MM4P@213118|Desulfobacterales 28221|Deltaproteobacteria G Polysaccharide deacetylase - - - - - - - - - - - - Polysacc_deac_1 WXD2_k127_1059726_6 929562.Emtol_1828 1.494e-07 62.0 COG1729@1|root,COG1729@2|Bacteria,4NEM2@976|Bacteroidetes,47PPQ@768503|Cytophagia 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_16,TPR_21,TPR_6,TPR_7,TPR_8 WXD2_k127_1059726_1 1303518.CCALI_01697 4.184e-55 210.0 COG1215@1|root,COG1215@2|Bacteria 2|Bacteria M transferase activity, transferring glycosyl groups - - - - - - - - - - - - Glyco_tranf_2_3,Glycos_transf_2 WXD2_k127_1063766_5 1267533.KB906733_gene3460 4.4e-35 136.0 COG0005@1|root,COG0005@2|Bacteria,3Y2MA@57723|Acidobacteria,2JI5Q@204432|Acidobacteriia 204432|Acidobacteriia F Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates mtnP - 2.4.2.28 ko:K00772 ko00270,ko01100,map00270,map01100 M00034 R01402 RC00063,RC02819 ko00000,ko00001,ko00002,ko01000 - - - PNP_UDP_1 WXD2_k127_1063766_1 316067.Geob_3538 4.683e-121 399.0 COG0524@1|root,COG0524@2|Bacteria,1Q8Y3@1224|Proteobacteria,42NSV@68525|delta/epsilon subdivisions,2WJWD@28221|Deltaproteobacteria,43S1S@69541|Desulfuromonadales 28221|Deltaproteobacteria H PFAM PfkB domain protein - - - - - - - - - - - iAF987.Gmet_2683 PfkB WXD2_k127_1063766_0 861299.J421_2451 4.152e-161 530.0 COG1574@1|root,COG1574@2|Bacteria,1ZTC9@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Amidohydrolase family - - - - - - - - - - - - Amidohydro_3 WXD2_k127_1063766_4 1382358.JHVN01000005_gene3079 1.392e-39 164.0 COG0741@1|root,COG0741@2|Bacteria,1V6DD@1239|Firmicutes,4HIWA@91061|Bacilli,21WDW@150247|Anoxybacillus 91061|Bacilli M Transglycosylase SLT domain yjbJ - - - - - - - - - - - SLT WXD2_k127_1063766_3 671143.DAMO_0325 1.763e-68 247.0 COG0061@1|root,COG0061@2|Bacteria,2NP7T@2323|unclassified Bacteria 2|Bacteria G Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP nadK GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 ko:K00858 ko00760,ko01100,map00760,map01100 - R00104 RC00002,RC00078 ko00000,ko00001,ko01000 - - iEcSMS35_1347.EcSMS35_2767,iHN637.CLJU_RS05480,iLJ478.TM1733,iSB619.SA_RS04895 NAD_kinase WXD2_k127_1063766_2 215803.DB30_0258 6.828e-103 347.0 COG1219@1|root,COG1219@2|Bacteria,1MVQK@1224|Proteobacteria,42MWJ@68525|delta/epsilon subdivisions,2WJ8Q@28221|Deltaproteobacteria,2YWSA@29|Myxococcales 28221|Deltaproteobacteria O C-terminal, D2-small domain, of ClpB protein - - - ko:K03544 ko04112,map04112 - - - ko00000,ko00001,ko03110 - - - AAA_2,ClpB_D2-small WXD2_k127_1063766_6 646529.Desaci_4046 4.534e-15 79.0 COG1555@1|root,COG1555@2|Bacteria,1VA3W@1239|Firmicutes,24MQF@186801|Clostridia,2621N@186807|Peptococcaceae 186801|Clostridia L TIGRFAM competence protein ComEA helix-hairpin-helix repeat region comEA - - ko:K02237 - M00429 - - ko00000,ko00002,ko02044 3.A.11.1,3.A.11.2 - - HHH_3,SLBB WXD2_k127_1063766_8 2340.JV46_25330 0.0006871 51.0 COG4970@1|root,COG4970@2|Bacteria,1NA2G@1224|Proteobacteria,1SDES@1236|Gammaproteobacteria 1236|Gammaproteobacteria NU Type II transport protein GspH - - - ko:K02679,ko:K08084 - - - - ko00000,ko02044 3.A.15.2 - - GspH,N_methyl WXD2_k127_1063766_7 358396.C445_16126 5.047e-05 47.0 COG3379@1|root,arCOG01377@2157|Archaea,2XUWW@28890|Euryarchaeota,23RZ5@183963|Halobacteria 183963|Halobacteria S type I phosphodiesterase nucleotide pyrophosphatase - - - - - - - - - - - - Phosphodiest WXD2_k127_1070038_1 1380391.JIAS01000011_gene5180 9.403e-88 297.0 COG1842@1|root,COG1842@2|Bacteria,1NNUD@1224|Proteobacteria 1224|Proteobacteria KT PspA/IM30 family - - - ko:K03969 - - - - ko00000 - - - PspA_IM30 WXD2_k127_1070038_2 1192034.CAP_6791 1.769e-07 61.0 2C4KT@1|root,340PA@2|Bacteria,1NYVI@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - WXD2_k127_1070038_0 1121013.P873_00385 9.723e-162 521.0 COG0464@1|root,COG0464@2|Bacteria,1RCHW@1224|Proteobacteria 1224|Proteobacteria O ATPase family associated with various cellular activities (AAA) - - - - - - - - - - - - AAA WXD2_k127_1072847_8 404589.Anae109_0988 1.203e-29 123.0 COG0534@1|root,COG0534@2|Bacteria,1MUAM@1224|Proteobacteria,42P67@68525|delta/epsilon subdivisions,2WJP7@28221|Deltaproteobacteria,2Z34G@29|Myxococcales 28221|Deltaproteobacteria V MatE - - - ko:K03327 - - - - ko00000,ko02000 2.A.66.1 - - MatE WXD2_k127_1072847_3 880073.Calab_3419 2.212e-128 419.0 COG1088@1|root,COG1088@2|Bacteria,2NNRC@2323|unclassified Bacteria 2|Bacteria M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily rfbB GO:0000166,GO:0000271,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005975,GO:0005976,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008460,GO:0009058,GO:0009059,GO:0009225,GO:0009226,GO:0009987,GO:0016051,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019305,GO:0019438,GO:0030312,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044464,GO:0045226,GO:0046379,GO:0046383,GO:0046483,GO:0048037,GO:0050662,GO:0051287,GO:0055086,GO:0070404,GO:0071704,GO:0071944,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 4.2.1.46,4.2.1.76 ko:K01710,ko:K12450 ko00520,ko00521,ko00523,ko00525,ko01055,ko01130,map00520,map00521,map00523,map00525,map01055,map01130 M00793 R00293,R06513 RC00402 ko00000,ko00001,ko00002,ko01000 - - iNJ661.Rv3464 GDP_Man_Dehyd WXD2_k127_1072847_9 1499684.CCNP01000021_gene2702 8.11e-15 79.0 COG0745@1|root,COG0745@2|Bacteria,1U4FM@1239|Firmicutes,24DF2@186801|Clostridia,36GMR@31979|Clostridiaceae 186801|Clostridia T Transcriptional regulatory protein, C terminal - - - ko:K18344 ko01502,ko02020,map01502,map02020 M00651,M00656 - - ko00000,ko00001,ko00002,ko01504,ko02022 - - - Response_reg,Trans_reg_C WXD2_k127_1072847_5 266117.Rxyl_2556 2.166e-109 366.0 COG0372@1|root,COG0372@2|Bacteria,2GM3G@201174|Actinobacteria,4CT9Z@84995|Rubrobacteria 84995|Rubrobacteria C Helix-turn-helix domain - - 2.3.3.1 ko:K01647 ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00740 R00351 RC00004,RC00067 br01601,ko00000,ko00001,ko00002,ko01000 - - - Citrate_synt,HTH_17 WXD2_k127_1072847_0 1121920.AUAU01000010_gene50 4.445e-170 556.0 COG0624@1|root,COG0624@2|Bacteria,3Y3TZ@57723|Acidobacteria 57723|Acidobacteria E peptidase dimerisation domain - - - - - - - - - - - - M20_dimer,Peptidase_M20 WXD2_k127_1072847_1 234267.Acid_2807 2.272e-165 545.0 COG0405@1|root,COG0405@2|Bacteria,3Y2N0@57723|Acidobacteria 57723|Acidobacteria E PFAM Gamma-glutamyltranspeptidase - - 2.3.2.2,3.4.19.13 ko:K00681 ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100 - R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935 RC00064,RC00090,RC00096 ko00000,ko00001,ko01000,ko01002 - - - G_glu_transpept WXD2_k127_1072847_6 1123288.SOV_2c10990 1.918e-100 340.0 COG1364@1|root,COG1364@2|Bacteria,1TPBP@1239|Firmicutes,4H2TK@909932|Negativicutes 909932|Negativicutes E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate argJ - 2.3.1.1,2.3.1.35 ko:K00620 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028 R00259,R02282 RC00004,RC00064 ko00000,ko00001,ko00002,ko01000 - - - ArgJ WXD2_k127_1072847_4 685778.AORL01000022_gene1567 8.362e-111 384.0 COG0165@1|root,COG0165@2|Bacteria,1MUTU@1224|Proteobacteria,2TR4H@28211|Alphaproteobacteria,2K185@204457|Sphingomonadales 204457|Sphingomonadales E argininosuccinate lyase argH - 4.3.2.1 ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 M00029,M00844,M00845 R01086 RC00445,RC00447 ko00000,ko00001,ko00002,ko01000,ko04147 - - - ASL_C2,Lyase_1 WXD2_k127_1072847_2 4432.XP_010275395.1 1.424e-164 532.0 COG0137@1|root,KOG1706@2759|Eukaryota,37QUX@33090|Viridiplantae,3G8Y6@35493|Streptophyta 35493|Streptophyta E argininosuccinate synthase - GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 M00029,M00844,M00845 R01954 RC00380,RC00629 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Arginosuc_synth WXD2_k127_1072847_7 1206731.BAGB01000032_gene9265 1.148e-75 263.0 COG4992@1|root,COG4992@2|Bacteria,2GKE9@201174|Actinobacteria,4FUWZ@85025|Nocardiaceae 201174|Actinobacteria E Aminotransferase class-III argD GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0008150,GO:0019842,GO:0030170,GO:0036094,GO:0040007,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.11,2.6.1.17 ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00028,M00845 R02283,R04475 RC00006,RC00062 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_3 WXD2_k127_1073345_1 1242864.D187_008279 2.49e-177 579.0 COG1629@1|root,COG4771@2|Bacteria,1PSM0@1224|Proteobacteria 1224|Proteobacteria P Outer membrane receptor - - - - - - - - - - - - CarboxypepD_reg,Plug,TonB_dep_Rec WXD2_k127_1073345_0 861299.J421_1673 5.133e-191 608.0 COG5368@1|root,COG5368@2|Bacteria 2|Bacteria S Putative glucoamylase - - - - - - - - - - - - Glycoamylase WXD2_k127_1073345_2 215803.DB30_8575 7.414e-131 439.0 COG1653@1|root,COG1653@2|Bacteria,1MX59@1224|Proteobacteria 1224|Proteobacteria G ABC transporter substrate-binding protein malE - - ko:K02027 - M00207 - - ko00000,ko00002,ko02000 3.A.1.1 - - SBP_bac_1,SBP_bac_8 WXD2_k127_1073345_3 243233.MCA1942 1.187e-106 372.0 COG1175@1|root,COG1175@2|Bacteria,1MWB7@1224|Proteobacteria,1RZC6@1236|Gammaproteobacteria,1XFR7@135618|Methylococcales 135618|Methylococcales P Binding-protein-dependent transport system inner membrane component - - - ko:K02025 - M00207 - - ko00000,ko00002,ko02000 3.A.1.1 - - BPD_transp_1 WXD2_k127_1073345_4 935863.AWZR01000003_gene2772 8.105e-106 349.0 COG0395@1|root,COG0395@2|Bacteria,1MUWS@1224|Proteobacteria,1S4G6@1236|Gammaproteobacteria,1X3NS@135614|Xanthomonadales 135614|Xanthomonadales P ABC-type sugar transport system, permease component - - - ko:K02026 - M00207 - - ko00000,ko00002,ko02000 3.A.1.1 - - BPD_transp_1 WXD2_k127_1077112_4 278963.ATWD01000002_gene983 6.638e-36 140.0 COG0542@1|root,COG0542@2|Bacteria,3Y35D@57723|Acidobacteria,2JIRK@204432|Acidobacteriia 204432|Acidobacteriia O Belongs to the ClpA ClpB family - - - ko:K03696 ko01100,map01100 - - - ko00000,ko03110 - - - AAA,AAA_2,ClpB_D2-small,Clp_N WXD2_k127_1077112_2 1125863.JAFN01000001_gene3407 4.317e-68 237.0 COG1136@1|root,COG1136@2|Bacteria,1MVSQ@1224|Proteobacteria,42QNS@68525|delta/epsilon subdivisions,2WMSN@28221|Deltaproteobacteria 28221|Deltaproteobacteria V Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner lolD - - ko:K09810 ko02010,map02010 M00255 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.125 - - ABC_tran WXD2_k127_1077112_5 1038867.AXAY01000024_gene6902 7.608e-26 117.0 COG0622@1|root,COG0622@2|Bacteria,1RGUN@1224|Proteobacteria,2U848@28211|Alphaproteobacteria,3JYUP@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria S Calcineurin-like phosphoesterase superfamily domain - - - ko:K07095 - - - - ko00000 - - - Metallophos_2 WXD2_k127_1077112_7 234267.Acid_0036 1.884e-07 64.0 COG2304@1|root,COG2304@2|Bacteria,3Y3DR@57723|Acidobacteria 57723|Acidobacteria S oxidoreductase activity - - - - - - - - - - - - - WXD2_k127_1077112_0 1519464.HY22_06470 3.708e-163 525.0 COG1473@1|root,COG1473@2|Bacteria,1FDR4@1090|Chlorobi 2|Bacteria S peptidase dimerisation domain protein - - - ko:K01436 - - - - ko00000,ko01000,ko01002 - - - M20_dimer,Peptidase_M20 WXD2_k127_1077112_1 562970.Btus_1051 1.277e-85 291.0 COG1028@1|root,COG1028@2|Bacteria,1TPDB@1239|Firmicutes,4HAKR@91061|Bacilli,2792M@186823|Alicyclobacillaceae 91061|Bacilli IQ KR domain - - - - - - - - - - - - adh_short_C2 WXD2_k127_1077112_6 1123508.JH636439_gene1393 1.321e-10 67.0 COG5569@1|root,COG5569@2|Bacteria,2J3PB@203682|Planctomycetes 203682|Planctomycetes S Copper binding periplasmic protein CusF - - - - - - - - - - - - CusF_Ec WXD2_k127_1077112_3 251221.35214312 1.315e-61 222.0 COG0303@1|root,COG0303@2|Bacteria,1G0K2@1117|Cyanobacteria 1117|Cyanobacteria H MoeA N-terminal region (Domain I and II) moeA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006464,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0018315,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0032324,GO:0034641,GO:0036211,GO:0042040,GO:0042278,GO:0043170,GO:0043412,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061598,GO:0061599,GO:0070566,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.10.1.1 ko:K03750 ko00790,ko01100,map00790,map01100 - R09735 RC03462 ko00000,ko00001,ko01000 - - - MoCF_biosynth,MoeA_C,MoeA_N WXD2_k127_107885_3 1232410.KI421418_gene2307 7.555e-57 209.0 COG0283@1|root,COG0283@2|Bacteria,1MUUD@1224|Proteobacteria,42STI@68525|delta/epsilon subdivisions,2WP1K@28221|Deltaproteobacteria,43VZJ@69541|Desulfuromonadales 28221|Deltaproteobacteria F Cytidylate kinase cmk - 2.7.4.25 ko:K00945 ko00240,ko01100,map00240,map01100 M00052 R00158,R00512,R01665 RC00002 ko00000,ko00001,ko00002,ko01000 - - - Cytidylate_kin WXD2_k127_107885_0 1499967.BAYZ01000095_gene4092 1.481e-190 615.0 COG0539@1|root,COG0539@2|Bacteria,2NNTP@2323|unclassified Bacteria 2|Bacteria J Ribosomal protein S1 rpsA - 1.17.7.4 ko:K02945,ko:K03527 ko00900,ko01100,ko01110,ko01130,ko03010,map00900,map01100,map01110,map01130,map03010 M00096,M00178 R05884,R08210 RC01137,RC01487 br01610,ko00000,ko00001,ko00002,ko01000,ko03011 - - - Cytidylate_kin,LYTB,S1 WXD2_k127_107885_2 1382359.JIAL01000001_gene2813 7.899e-67 241.0 COG0616@1|root,COG0616@2|Bacteria,3Y3M1@57723|Acidobacteria,2JI8A@204432|Acidobacteriia 204432|Acidobacteriia OU PFAM peptidase S49 - - - ko:K04773 - - - - ko00000,ko01000,ko01002 - - - Peptidase_S49 WXD2_k127_107885_6 204669.Acid345_4105 1.959e-34 136.0 COG0776@1|root,COG0776@2|Bacteria,3Y56V@57723|Acidobacteria,2JJMF@204432|Acidobacteriia 204432|Acidobacteriia L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions - - - ko:K05788 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding WXD2_k127_107885_4 269799.Gmet_1638 1.297e-48 180.0 COG0537@1|root,COG0537@2|Bacteria,1RHYQ@1224|Proteobacteria,42SEG@68525|delta/epsilon subdivisions,2WPFW@28221|Deltaproteobacteria,43V0C@69541|Desulfuromonadales 28221|Deltaproteobacteria FG Bis-adenosyl-polyphosphate hydrolase, FHIT domain-containing - - 2.7.7.53 ko:K19710 ko00230,map00230 - R00126,R01618 RC00002,RC02753,RC02795 ko00000,ko00001,ko01000 - - - CwfJ_C_1,HIT WXD2_k127_107885_7 240015.ACP_0810 2.971e-11 74.0 2DTIS@1|root,33KJ1@2|Bacteria,3Y5U4@57723|Acidobacteria,2JN6V@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - WXD2_k127_107885_1 243231.GSU2261 5.565e-87 300.0 COG0763@1|root,COG0763@2|Bacteria,1MVBI@1224|Proteobacteria,42P35@68525|delta/epsilon subdivisions,2WJFA@28221|Deltaproteobacteria,43SZS@69541|Desulfuromonadales 28221|Deltaproteobacteria M Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell lpxB GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 ko:K00748 ko00540,ko01100,map00540,map01100 M00060 R04606 RC00005,RC00059 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT19 - LpxB WXD2_k127_107885_5 1047013.AQSP01000124_gene2668 4.324e-38 154.0 COG1132@1|root,COG1132@2|Bacteria,2NNVD@2323|unclassified Bacteria 2|Bacteria V ABC transporter msbA GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006855,GO:0006869,GO:0008144,GO:0008150,GO:0008289,GO:0008559,GO:0009987,GO:0010876,GO:0015221,GO:0015238,GO:0015399,GO:0015405,GO:0015437,GO:0015893,GO:0015920,GO:0016020,GO:0016021,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034040,GO:0034204,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0042626,GO:0042802,GO:0042908,GO:0042910,GO:0043167,GO:0043168,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0061024,GO:0065007,GO:0065008,GO:0071702,GO:0071840,GO:0071944,GO:0097035,GO:0097159,GO:0097367,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901265,GO:1901363,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - ko:K02021,ko:K06147,ko:K11085 ko02010,map02010 - - - ko00000,ko00001,ko01000,ko02000 3.A.1.106,3.A.1.109,3.A.1.110,3.A.1.112,3.A.1.113,3.A.1.117,3.A.1.21 - iJN746.PP_4935,iPC815.YPO1395,iUMN146_1321.UM146_12980 ABC_membrane,ABC_tran WXD2_k127_1080107_0 1267535.KB906767_gene4670 4.574e-68 243.0 COG0438@1|root,COG0438@2|Bacteria,3Y6A8@57723|Acidobacteria 57723|Acidobacteria M Domain of unknown function (DUF1972) - - - - - - - - - - - - DUF1972,Glyco_trans_1_4 WXD2_k127_1080107_1 234267.Acid_7442 9.481e-64 239.0 COG1216@1|root,COG1216@2|Bacteria,3Y7CJ@57723|Acidobacteria 57723|Acidobacteria S Glycosyltransferase like family 2 - - - - - - - - - - - - Glycos_transf_2 WXD2_k127_1080107_3 1379698.RBG1_1C00001G0386 4.525e-41 173.0 COG1216@1|root,COG1216@2|Bacteria,2NP9Z@2323|unclassified Bacteria 2|Bacteria GM Glycosyltransferase like family 2 wbbL - - ko:K07011 - - - - ko00000 - - - Glyco_tranf_2_3,Glyco_trans_2_3,Glycos_transf_2 WXD2_k127_1080107_2 1179773.BN6_76360 4.907e-46 179.0 COG0438@1|root,COG1216@1|root,COG0438@2|Bacteria,COG1216@2|Bacteria,2GK2D@201174|Actinobacteria,4DXK5@85010|Pseudonocardiales 201174|Actinobacteria M glycosyl transferase family 2 - - - ko:K07011 - - - - ko00000 - - - Glyco_tranf_2_3,Glyco_trans_1_4,Glycos_transf_1,Glycos_transf_2 WXD2_k127_1102711_1 1121430.JMLG01000019_gene1642 7.773e-28 121.0 COG1595@1|root,COG1595@2|Bacteria,1TS3M@1239|Firmicutes,24IW2@186801|Clostridia,262RV@186807|Peptococcaceae 186801|Clostridia K Belongs to the sigma-70 factor family. ECF subfamily algU - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 WXD2_k127_1102711_2 1267535.KB906767_gene105 4.549e-25 119.0 COG3307@1|root,COG3307@2|Bacteria,3Y67G@57723|Acidobacteria 57723|Acidobacteria M O-antigen ligase like membrane protein - - - - - - - - - - - - Wzy_C WXD2_k127_1102711_5 1267535.KB906767_gene1432 5.884e-09 68.0 COG2835@1|root,COG2835@2|Bacteria,3Y8VE@57723|Acidobacteria 57723|Acidobacteria S Trm112p-like protein - - - ko:K09791 - - - - ko00000 - - - Trm112p WXD2_k127_1102711_3 215803.DB30_0007 3.8e-14 84.0 COG0438@1|root,COG0438@2|Bacteria,1Q2SF@1224|Proteobacteria,433VN@68525|delta/epsilon subdivisions,2WYNQ@28221|Deltaproteobacteria,2YWQW@29|Myxococcales 28221|Deltaproteobacteria M Glycosyltransferase Family 4 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 WXD2_k127_1102711_0 1479238.JQMZ01000001_gene112 5.908e-55 199.0 COG1878@1|root,COG1878@2|Bacteria,1P8U5@1224|Proteobacteria,2U7KU@28211|Alphaproteobacteria,43ZSG@69657|Hyphomonadaceae 28211|Alphaproteobacteria E Putative cyclase kynB GO:0003674,GO:0003824,GO:0004061,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 ko:K07130 ko00380,ko00630,ko01100,map00380,map00630,map01100 M00038 R00988,R01959,R04911 RC00263,RC00323 ko00000,ko00001,ko00002,ko01000 - - - Cyclase WXD2_k127_1102711_4 1313301.AUGC01000003_gene2147 4.588e-09 57.0 COG0251@1|root,COG0251@2|Bacteria,4NMHF@976|Bacteroidetes 976|Bacteroidetes J Translation initiation inhibitor, yjgF family - - 3.5.99.5 ko:K15067 ko00380,map00380 - R03887 RC01015 ko00000,ko00001,ko01000 - - - Ribonuc_L-PSP WXD2_k127_1102905_0 316274.Haur_3380 4.309e-58 209.0 COG1884@1|root,COG1884@2|Bacteria,2G62T@200795|Chloroflexi,374XE@32061|Chloroflexia 32061|Chloroflexia I TIGRFAM methylmalonyl-CoA mutase, large subunit - - 5.4.99.2 ko:K01848 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00375,M00376,M00741 R00833 RC00395 ko00000,ko00001,ko00002,ko01000 - - - MM_CoA_mutase WXD2_k127_1102905_3 1476876.JOJO01000024_gene1795 5.708e-06 55.0 COG1024@1|root,COG1024@2|Bacteria,2GJG7@201174|Actinobacteria 201174|Actinobacteria I Belongs to the enoyl-CoA hydratase isomerase family - - - - - - - - - - - - ECH_1 WXD2_k127_1102905_1 1278073.MYSTI_01480 5.865e-25 107.0 COG3809@1|root,COG3809@2|Bacteria,1Q8Z4@1224|Proteobacteria,42UTF@68525|delta/epsilon subdivisions,2WXCZ@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Transcription factor zinc-finger - - - ko:K09981 - - - - ko00000 - - - zf-TFIIB WXD2_k127_1102905_2 1184609.KILIM_055_00340 1.679e-19 98.0 COG0500@1|root,COG2226@2|Bacteria,2HSXR@201174|Actinobacteria,4F7KH@85018|Dermatophilaceae 201174|Actinobacteria Q Methyltransferase domain - - - - - - - - - - - - Methyltransf_11 WXD2_k127_1117637_2 1278073.MYSTI_06726 2.959e-125 408.0 COG3214@1|root,COG3214@2|Bacteria,1N40B@1224|Proteobacteria 1224|Proteobacteria S protein conserved in bacteria ycaQ - - ko:K09927 - - - - ko00000 - - - HTH_42 WXD2_k127_1117637_5 319225.Plut_0991 0.0002386 54.0 COG0457@1|root,COG0457@2|Bacteria 319225.Plut_0991|- S peptidyl-tyrosine sulfation - - - - - - - - - - - - - WXD2_k127_1117637_1 1042376.AFPK01000038_gene582 4.571e-155 505.0 COG1215@1|root,COG1215@2|Bacteria,4NEK9@976|Bacteroidetes,1HYXG@117743|Flavobacteriia 976|Bacteroidetes GM Glycosyl transferase family 21 - - 2.4.1.12 ko:K00694 ko00500,ko01100,ko02026,map00500,map01100,map02026 - R02889 RC00005 ko00000,ko00001,ko01000,ko01003,ko02000 4.D.3.1.2,4.D.3.1.5,4.D.3.1.6 GT2 - Glyco_hydro_26,Glyco_hydro_2_C,Glyco_transf_21 WXD2_k127_1117637_4 448385.sce4867 2.398e-84 298.0 COG4124@1|root,COG4124@2|Bacteria,1QH7T@1224|Proteobacteria 1224|Proteobacteria G Belongs to the glycosyl hydrolase 26 family - - 3.2.1.4 ko:K01179 ko00500,ko01100,map00500,map01100 - R06200,R11307,R11308 - ko00000,ko00001,ko01000 - GH5,GH9 - Glyco_hydro_26 WXD2_k127_1117637_0 1121920.AUAU01000004_gene739 8.209e-298 919.0 COG0488@1|root,COG0488@2|Bacteria,3Y340@57723|Acidobacteria 57723|Acidobacteria S PFAM ABC transporter - - - - - - - - - - - - ABC_tran,ABC_tran_Xtn WXD2_k127_1117637_3 1396141.BATP01000057_gene3029 6.142e-121 401.0 COG0683@1|root,COG0683@2|Bacteria,46UD1@74201|Verrucomicrobia,2IVJB@203494|Verrucomicrobiae 203494|Verrucomicrobiae E Receptor family ligand binding region - - - - - - - - - - - - Peripla_BP_6 WXD2_k127_1128183_7 1267535.KB906767_gene2705 7.719e-50 179.0 COG0051@1|root,COG0051@2|Bacteria,3Y4V5@57723|Acidobacteria,2JJAS@204432|Acidobacteriia 204432|Acidobacteriia J Involved in the binding of tRNA to the ribosomes rpsJ - - ko:K02946 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S10 WXD2_k127_1128183_3 234267.Acid_5118 2.073e-72 250.0 COG0087@1|root,COG0087@2|Bacteria,3Y2H7@57723|Acidobacteria 57723|Acidobacteria J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit rplC - - ko:K02906 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L3 WXD2_k127_1128183_6 1280696.ATVY01000026_gene130 3.611e-52 191.0 COG0088@1|root,COG0088@2|Bacteria,1TPGW@1239|Firmicutes,248SY@186801|Clostridia,4BX2C@830|Butyrivibrio 186801|Clostridia J Forms part of the polypeptide exit tunnel rplD - - ko:K02926 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L4 WXD2_k127_1128183_12 234267.Acid_5116 1.194e-28 117.0 COG0089@1|root,COG0089@2|Bacteria,3Y58W@57723|Acidobacteria 57723|Acidobacteria J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome rplW - - ko:K02892 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L23 WXD2_k127_1128183_0 1267535.KB906767_gene2701 5.687e-123 399.0 COG0090@1|root,COG0090@2|Bacteria,3Y3DH@57723|Acidobacteria,2JI2K@204432|Acidobacteriia 204432|Acidobacteriia J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity rplB - - ko:K02886 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L2,Ribosomal_L2_C WXD2_k127_1128183_10 1267533.KB906735_gene5126 9.139e-37 142.0 COG0185@1|root,COG0185@2|Bacteria,3Y560@57723|Acidobacteria,2JJMI@204432|Acidobacteriia 204432|Acidobacteriia J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA rpsS - - ko:K02965 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S19 WXD2_k127_1128183_11 1340493.JNIF01000003_gene3212 2.146e-33 132.0 COG0091@1|root,COG0091@2|Bacteria,3Y4KH@57723|Acidobacteria 57723|Acidobacteria J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome rplV - - ko:K02890 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L22 WXD2_k127_1128183_1 234267.Acid_5112 3.457e-91 306.0 COG0092@1|root,COG0092@2|Bacteria,3Y3ZN@57723|Acidobacteria 57723|Acidobacteria J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation rpsC - - ko:K02982 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - KH_2,Ribosomal_S3_C WXD2_k127_1128183_4 56780.SYN_00992 1.227e-65 226.0 COG0197@1|root,COG0197@2|Bacteria,1RA0Z@1224|Proteobacteria,42QW5@68525|delta/epsilon subdivisions,2WP71@28221|Deltaproteobacteria,2MQGG@213462|Syntrophobacterales 28221|Deltaproteobacteria J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs rplP GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - ko:K02878 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L16 WXD2_k127_1128183_17 314271.RB2654_11113 3.374e-09 64.0 COG0255@1|root,COG0255@2|Bacteria,1N6PR@1224|Proteobacteria,2UF59@28211|Alphaproteobacteria 28211|Alphaproteobacteria J Belongs to the universal ribosomal protein uL29 family rpmC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02904 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L29 WXD2_k127_1128183_14 289377.HL41_05400 5.28e-23 102.0 COG0186@1|root,COG0186@2|Bacteria,2GHYC@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA rpsQ - - ko:K02961 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S17 WXD2_k127_1128183_8 1280685.AUKC01000016_gene418 1.026e-48 178.0 COG0093@1|root,COG0093@2|Bacteria,1V3N0@1239|Firmicutes,24H98@186801|Clostridia,4BZCB@830|Butyrivibrio 186801|Clostridia J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome rplN - - ko:K02874 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L14 WXD2_k127_1128183_13 526222.Desal_1196 4.414e-27 114.0 COG0198@1|root,COG0198@2|Bacteria,1MZQD@1224|Proteobacteria,42TGC@68525|delta/epsilon subdivisions,2WQ2G@28221|Deltaproteobacteria,2MC5T@213115|Desulfovibrionales 28221|Deltaproteobacteria J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit rplX GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02895 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - KOW,ribosomal_L24 WXD2_k127_1128183_2 1267533.KB906735_gene5118 9.368e-78 264.0 COG0094@1|root,COG0094@2|Bacteria,3Y3PS@57723|Acidobacteria,2JHV4@204432|Acidobacteriia 204432|Acidobacteriia J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits rplE - - ko:K02931 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L5,Ribosomal_L5_C WXD2_k127_1128183_15 760011.Spico_1703 5.896e-23 98.0 COG0199@1|root,COG0199@2|Bacteria,2J8U1@203691|Spirochaetes 203691|Spirochaetes J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site rpsN - - ko:K02954 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S14 WXD2_k127_1128183_9 240015.ACP_1437 5.925e-46 169.0 COG0096@1|root,COG0096@2|Bacteria,3Y4IE@57723|Acidobacteria,2JJ74@204432|Acidobacteriia 204432|Acidobacteriia J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit rpsH - - ko:K02994 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S8 WXD2_k127_1128183_5 945713.IALB_0927 7.697e-59 209.0 COG0097@1|root,COG0097@2|Bacteria 2|Bacteria J rRNA binding rplF GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02933 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L6 WXD2_k127_1128183_16 234267.Acid_5102 6.024e-21 96.0 COG0256@1|root,COG0256@2|Bacteria,3Y5CH@57723|Acidobacteria 57723|Acidobacteria J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance rplR - - ko:K02881 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L18p WXD2_k127_1136066_2 543728.Vapar_5668 1.404e-93 310.0 COG1638@1|root,COG1638@2|Bacteria,1MWXG@1224|Proteobacteria,2VH3H@28216|Betaproteobacteria,4ADB6@80864|Comamonadaceae 28216|Betaproteobacteria G TIGRFAM TRAP dicarboxylate transporter, DctP subunit - - - - - - - - - - - - DctP WXD2_k127_1136066_5 671143.DAMO_2968 5.054e-42 160.0 COG0251@1|root,COG0251@2|Bacteria,2NPSA@2323|unclassified Bacteria 2|Bacteria J Endoribonuclease L-PSP - - 3.5.99.10 ko:K09022 - - R11098,R11099 RC03275,RC03354 ko00000,ko01000 - - - Pentapeptide,Ribonuc_L-PSP WXD2_k127_1136066_6 765912.Thimo_2322 4.261e-09 65.0 COG1714@1|root,COG1714@2|Bacteria,1N4N8@1224|Proteobacteria,1S9C5@1236|Gammaproteobacteria,1WYQZ@135613|Chromatiales 135613|Chromatiales S pfam rdd - - - - - - - - - - - - RDD WXD2_k127_1136066_3 204669.Acid345_2293 1.033e-84 291.0 COG3301@1|root,COG3301@2|Bacteria,3Y506@57723|Acidobacteria,2JN1H@204432|Acidobacteriia 204432|Acidobacteriia P Polysulphide reductase, NrfD - - - - - - - - - - - - NrfD WXD2_k127_1136066_1 204669.Acid345_2292 1.937e-111 376.0 COG0437@1|root,COG0437@2|Bacteria,3Y47T@57723|Acidobacteria,2JMIW@204432|Acidobacteriia 204432|Acidobacteriia C 4Fe-4S dicluster domain - - - ko:K00124 ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200 - R00519 RC02796 ko00000,ko00001 - - - Fer4_11 WXD2_k127_1136066_0 483219.LILAB_27480 3.809e-310 969.0 COG0243@1|root,COG3383@1|root,COG0243@2|Bacteria,COG3383@2|Bacteria,1MW3N@1224|Proteobacteria,42QCE@68525|delta/epsilon subdivisions,2WK8Z@28221|Deltaproteobacteria 28221|Deltaproteobacteria C Molydopterin dinucleotide binding domain - - 1.17.1.9 ko:K00123 ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200 - R00519 RC02796 ko00000,ko00001,ko01000 - - - Molybdopterin,Molydop_binding WXD2_k127_1136066_4 204669.Acid345_2290 3.876e-63 222.0 COG3383@1|root,COG3383@2|Bacteria 2|Bacteria C formate dehydrogenase (NAD+) activity - - - - - - - - - - - iHN637.CLJU_RS03470 Fer2_4,Fer4,Fer4_21,Fer4_7 WXD2_k127_1139281_1 391625.PPSIR1_34013 2.264e-24 114.0 COG1716@1|root,COG2114@1|root,COG2203@1|root,COG1716@2|Bacteria,COG2114@2|Bacteria,COG2203@2|Bacteria,1R45Z@1224|Proteobacteria,43AMH@68525|delta/epsilon subdivisions,2X61H@28221|Deltaproteobacteria,2Z38T@29|Myxococcales 28221|Deltaproteobacteria T Adenylyl- / guanylyl cyclase, catalytic domain - - 4.6.1.1 ko:K01768 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000 - - - FHA,GAF,Guanylate_cyc WXD2_k127_1139281_2 235909.GK3233 1.246e-16 85.0 COG5652@1|root,COG5652@2|Bacteria,1TU2J@1239|Firmicutes,4HQ9P@91061|Bacilli,1WGH9@129337|Geobacillus 91061|Bacilli S VanZ like family - - - - - - - - - - - - VanZ WXD2_k127_1139281_0 13690.CP98_02547 3.114e-117 401.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,1MWGR@1224|Proteobacteria,2TUXY@28211|Alphaproteobacteria,2K16Q@204457|Sphingomonadales 204457|Sphingomonadales EU peptidase S9 - - - - - - - - - - - - PD40,Peptidase_S9 WXD2_k127_1139281_3 1033734.CAET01000048_gene1706 2.428e-10 74.0 COG2385@1|root,COG2385@2|Bacteria,1UW6J@1239|Firmicutes,4HCNK@91061|Bacilli 91061|Bacilli D sporulation protein - - - ko:K06381 - - - - ko00000 - - - SPOR,SpoIID WXD2_k127_1146111_0 290397.Adeh_0989 6.663e-113 397.0 COG1409@1|root,COG1409@2|Bacteria,1MXD6@1224|Proteobacteria,42WZF@68525|delta/epsilon subdivisions,2WTE8@28221|Deltaproteobacteria,2Z34X@29|Myxococcales 28221|Deltaproteobacteria S Calcineurin-like phosphoesterase superfamily domain - - - - - - - - - - - - Metallophos WXD2_k127_1146111_1 903818.KI912269_gene158 6.97e-112 381.0 COG0507@1|root,COG0551@1|root,COG0507@2|Bacteria,COG0551@2|Bacteria 2|Bacteria L DNA topological change helD - 3.6.4.12,5.99.1.2 ko:K03168,ko:K03658 - - - - ko00000,ko01000,ko03032,ko03400 - - - HRDC,HTH_40,Herpes_Helicase,PIF1,TPR_8,UvrD-helicase,UvrD_C,UvrD_C_2,zf-C4_Topoisom WXD2_k127_1146111_3 335543.Sfum_2673 6.184e-72 253.0 COG5660@1|root,2Z7TM@2|Bacteria,1PMCV@1224|Proteobacteria,42Q81@68525|delta/epsilon subdivisions,2WIJ3@28221|Deltaproteobacteria 28221|Deltaproteobacteria S TRAP transporter T-component - - - - - - - - - - - - TAtT WXD2_k127_1146111_2 1100720.ALKN01000007_gene2915 3.251e-95 334.0 COG1638@1|root,COG1638@2|Bacteria,1PMWE@1224|Proteobacteria,2VNJI@28216|Betaproteobacteria 28216|Betaproteobacteria G Bacterial extracellular solute-binding protein, family 7 - - - - - - - - - - - - DctP WXD2_k127_1146111_4 382464.ABSI01000012_gene2146 2.045e-23 109.0 COG1593@1|root,COG1593@2|Bacteria 2|Bacteria G mannitol 2-dehydrogenase activity - - - ko:K11690 ko02020,map02020 - - - ko00000,ko00001,ko02000 2.A.56.1 - - DctM,DctQ WXD2_k127_117837_3 1232410.KI421421_gene3541 1.953e-24 111.0 COG4103@1|root,COG4103@2|Bacteria,1N6YZ@1224|Proteobacteria,42WGY@68525|delta/epsilon subdivisions,2WS4W@28221|Deltaproteobacteria,43VDK@69541|Desulfuromonadales 28221|Deltaproteobacteria S Tellurite resistance protein TerB - - - - - - - - - - - - TerB WXD2_k127_117837_1 1144275.COCOR_03465 2.226e-123 404.0 COG0010@1|root,COG0010@2|Bacteria,1RCQX@1224|Proteobacteria,42R4M@68525|delta/epsilon subdivisions,2X5RQ@28221|Deltaproteobacteria,2YYRW@29|Myxococcales 28221|Deltaproteobacteria E Belongs to the arginase family speB - 3.5.3.11 ko:K01480 ko00330,ko01100,map00330,map01100 M00133 R01157 RC00024,RC00329 ko00000,ko00001,ko00002,ko01000 - - - Arginase WXD2_k127_117837_5 204669.Acid345_2182 4.075e-07 55.0 2CBGA@1|root,32RQS@2|Bacteria,3Y586@57723|Acidobacteria,2JJU2@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - WXD2_k127_117837_0 1211114.ALIP01000118_gene2109 2.143e-127 418.0 COG0626@1|root,COG0626@2|Bacteria,1MU57@1224|Proteobacteria,1RMCV@1236|Gammaproteobacteria,1X5QJ@135614|Xanthomonadales 135614|Xanthomonadales E Cys/Met metabolism PLP-dependent enzyme - - 2.5.1.48 ko:K01739 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 M00017 R00999,R01288,R02508,R03217,R03260,R04944,R04945,R04946 RC00020,RC00056,RC00069,RC00420,RC02848,RC02866 ko00000,ko00001,ko00002,ko01000 - - - Cys_Met_Meta_PP WXD2_k127_117837_4 1444711.CCJF01000005_gene1005 4.99e-16 87.0 COG1994@1|root,COG1994@2|Bacteria,2JFYC@204428|Chlamydiae 204428|Chlamydiae S Tetratricopeptide repeat - - - - - - - - - - - - Peptidase_M50,Peptidase_M50B WXD2_k127_117837_2 204669.Acid345_3014 2.328e-55 211.0 COG0784@1|root,COG2202@1|root,COG2203@1|root,COG4191@1|root,COG0784@2|Bacteria,COG2202@2|Bacteria,COG2203@2|Bacteria,COG4191@2|Bacteria,3Y64H@57723|Acidobacteria,2JM5F@204432|Acidobacteriia 204432|Acidobacteriia T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HisKA,Response_reg WXD2_k127_1178370_1 383381.EH30_02410 3.291e-108 369.0 COG0457@1|root,COG0457@2|Bacteria,1N0A9@1224|Proteobacteria,2TTMN@28211|Alphaproteobacteria,2K2YU@204457|Sphingomonadales 204457|Sphingomonadales S COG0457 FOG TPR repeat - - - - - - - - - - - - TPR_14,TPR_8 WXD2_k127_1178370_0 102129.Lepto7375DRAFT_0197 1.28e-174 574.0 COG1680@1|root,COG1680@2|Bacteria 2|Bacteria V peptidase activity - - - - - - - - - - - - Beta-lactamase WXD2_k127_1178370_5 1128421.JAGA01000003_gene3073 4.687e-23 111.0 COG1572@1|root,COG4655@1|root,COG5434@1|root,COG1572@2|Bacteria,COG4655@2|Bacteria,COG5434@2|Bacteria 2|Bacteria M polygalacturonase activity - - - - - - - - - - - - Beta_helix,CARDB,CBM_35,DUF11,F5_F8_type_C,Pectate_lyase_3,Tad WXD2_k127_1178370_4 483219.LILAB_06250 2.09e-60 213.0 COG4636@1|root,COG4636@2|Bacteria,1RCFH@1224|Proteobacteria,43ACW@68525|delta/epsilon subdivisions,2X5SW@28221|Deltaproteobacteria,2YZYB@29|Myxococcales 28221|Deltaproteobacteria S Putative restriction endonuclease - - - - - - - - - - - - Uma2 WXD2_k127_1178370_3 404589.Anae109_1654 1.732e-62 221.0 COG2764@1|root,COG2764@2|Bacteria,1RF5T@1224|Proteobacteria,42SN0@68525|delta/epsilon subdivisions,2WPY6@28221|Deltaproteobacteria,2Z0UJ@29|Myxococcales 28221|Deltaproteobacteria S Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - ko:K04750 - - - - ko00000 - - - 3-dmu-9_3-mt,Glyoxalase WXD2_k127_1178370_2 396588.Tgr7_1824 7.24e-64 223.0 COG0454@1|root,COG0456@2|Bacteria,1RHEU@1224|Proteobacteria,1S9A5@1236|Gammaproteobacteria 1236|Gammaproteobacteria K Acetyltransferase (GNAT) family - - 2.3.1.60 ko:K03395 - - - - br01600,ko00000,ko01000,ko01504 - - - Acetyltransf_1 WXD2_k127_1187875_3 330214.NIDE2086 8.372e-70 268.0 COG1074@1|root,COG1074@2|Bacteria,3J16M@40117|Nitrospirae 40117|Nitrospirae L PD-(D/E)XK nuclease superfamily - - - - - - - - - - - - PDDEXK_1,UvrD-helicase,UvrD_C WXD2_k127_1187875_13 36875.HQ29_02695 1.316e-28 123.0 COG2095@1|root,COG2095@2|Bacteria,4NIHF@976|Bacteroidetes,2FMIJ@200643|Bacteroidia,22XS3@171551|Porphyromonadaceae 976|Bacteroidetes U MarC family integral membrane protein - - - ko:K05595 - - - - ko00000,ko02000 2.A.95.1 - - MarC WXD2_k127_1187875_2 204669.Acid345_1150 2.657e-71 248.0 arCOG09454@1|root,31B41@2|Bacteria,3Y8HD@57723|Acidobacteria,2JNG1@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - WXD2_k127_1187875_6 1235813.JCM10003_1585 4.469e-53 206.0 COG1597@1|root,COG1597@2|Bacteria,4NJWB@976|Bacteroidetes,2FMGJ@200643|Bacteroidia,4AMWM@815|Bacteroidaceae 976|Bacteroidetes I lipid kinase, YegS Rv2252 BmrU family - - - - - - - - - - - - DAGK_cat WXD2_k127_1187875_12 521674.Plim_1896 2.969e-32 130.0 COG0394@1|root,COG0394@2|Bacteria,2J115@203682|Planctomycetes 203682|Planctomycetes T Low molecular weight phosphotyrosine protein phosphatase - - 1.20.4.1 ko:K03741 - - - - ko00000,ko01000 - - - LMWPc WXD2_k127_1187875_4 266117.Rxyl_2372 2.709e-69 243.0 COG0259@1|root,COG0259@2|Bacteria,2GJCR@201174|Actinobacteria,4CQ9H@84995|Rubrobacteria 84995|Rubrobacteria H Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) pdxH - 1.4.3.5 ko:K00275 ko00750,ko01100,ko01120,map00750,map01100,map01120 M00124 R00277,R00278,R01710,R01711 RC00048,RC00116 ko00000,ko00001,ko00002,ko01000 - - - PNP_phzG_C,Putative_PNPOx WXD2_k127_1187875_14 1307761.L21SP2_2395 1.436e-25 120.0 COG1051@1|root,COG1051@2|Bacteria 2|Bacteria F GDP-mannose mannosyl hydrolase activity - - - - - - - - - - - - NUDIX WXD2_k127_1187875_10 234267.Acid_4378 4.345e-36 141.0 COG2322@1|root,COG2322@2|Bacteria,3Y5H4@57723|Acidobacteria 57723|Acidobacteria S Protein of unknown function (DUF420) - - - ko:K08976 - - - - ko00000 - - - DUF420 WXD2_k127_1187875_11 497964.CfE428DRAFT_2238 2.932e-33 135.0 COG1999@1|root,COG1999@2|Bacteria,46VZB@74201|Verrucomicrobia 74201|Verrucomicrobia S SCO1/SenC - - - ko:K07152 - - - - ko00000,ko03029 - - - SCO1-SenC WXD2_k127_1187875_5 234267.Acid_4382 4.579e-69 257.0 COG0109@1|root,COG0109@2|Bacteria,3Y3VI@57723|Acidobacteria 57723|Acidobacteria O Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group ctaB - 2.5.1.141 ko:K02257 ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714 M00154 R07411 RC01786 ko00000,ko00001,ko00002,ko01000,ko01006,ko03029 - - - UbiA WXD2_k127_1187875_9 1156937.MFUM_1040009 4.929e-41 164.0 COG1612@1|root,COG1612@2|Bacteria,46T3F@74201|Verrucomicrobia,37G83@326457|unclassified Verrucomicrobia 74201|Verrucomicrobia O Cytochrome oxidase assembly protein ctaA - - ko:K02259 ko00190,ko00860,ko01100,ko01110,ko02020,ko04714,map00190,map00860,map01100,map01110,map02020,map04714 M00154 R07412 RC00769 ko00000,ko00001,ko00002,ko03029 3.D.4.4 - - COX15-CtaA WXD2_k127_1187875_1 497964.CfE428DRAFT_2235 4.653e-72 251.0 COG1622@1|root,COG1622@2|Bacteria,46SPQ@74201|Verrucomicrobia 74201|Verrucomicrobia C Cytochrome C oxidase subunit II, periplasmic domain - - 1.9.3.1 ko:K02275 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.2,3.D.4.4,3.D.4.6 - - COX2 WXD2_k127_1187875_16 1267535.KB906767_gene1090 5.027e-09 64.0 2DR0H@1|root,339NS@2|Bacteria 2|Bacteria S TIGRFAM Caa(3)-type oxidase, subunit IV - - 1.9.3.1 ko:K02277 ko00190,ko01100,map00190,map01100 M00155 - - ko00000,ko00001,ko00002,ko01000 3.D.4.4 - - COX4_pro WXD2_k127_1187875_7 481448.Minf_1950 8e-53 194.0 COG1845@1|root,COG1845@2|Bacteria,46SRD@74201|Verrucomicrobia,37FZZ@326457|unclassified Verrucomicrobia 74201|Verrucomicrobia C Cytochrome c oxidase subunit III cyoC - 1.9.3.1 ko:K02276 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.4,3.D.4.6 - - COX3 WXD2_k127_1187875_0 234267.Acid_5590 2.689e-164 537.0 COG0843@1|root,COG0843@2|Bacteria,3Y2NS@57723|Acidobacteria 57723|Acidobacteria C Belongs to the heme-copper respiratory oxidase family - - 1.9.3.1 ko:K02274 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.2,3.D.4.3,3.D.4.4,3.D.4.6 - - COX1 WXD2_k127_1187875_8 639030.JHVA01000001_gene2022 2.707e-49 188.0 COG3794@1|root,COG3794@2|Bacteria,3Y4C0@57723|Acidobacteria,2JJME@204432|Acidobacteriia 204432|Acidobacteriia C Polysaccharide lyase family 4, domain II - - - - - - - - - - - - CarboxypepD_reg WXD2_k127_1187875_15 1201288.M900_0273 4.136e-16 87.0 COG2010@1|root,COG2010@2|Bacteria,1RJJ2@1224|Proteobacteria,42SCM@68525|delta/epsilon subdivisions,2MUN1@213481|Bdellovibrionales,2WPS4@28221|Deltaproteobacteria 213481|Bdellovibrionales C Cytochrome c pcmF - - - - - - - - - - - Cytochrom_C,Cytochrome_CBB3 WXD2_k127_1234433_0 1144275.COCOR_07372 1.052e-210 664.0 COG3303@1|root,COG3303@2|Bacteria,1MVJT@1224|Proteobacteria,42MPU@68525|delta/epsilon subdivisions,2WIJ1@28221|Deltaproteobacteria,2YUSH@29|Myxococcales 28221|Deltaproteobacteria C Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process nrfA - 1.7.2.2 ko:K03385 ko00910,ko01120,ko05132,map00910,map01120,map05132 M00530 R05712 RC00176 ko00000,ko00001,ko00002,ko01000 - - - Cytochrom_C552 WXD2_k127_1234433_4 448385.sce1438 2.033e-54 196.0 COG3005@1|root,COG3005@2|Bacteria,1N0I4@1224|Proteobacteria,42R1B@68525|delta/epsilon subdivisions,2WSF5@28221|Deltaproteobacteria,2Z0Q9@29|Myxococcales 28221|Deltaproteobacteria C cytochrome c nitrite reductase - - - ko:K15876 ko00910,ko01120,map00910,map01120 M00530 R05712 RC00176 ko00000,ko00001,ko00002 - - - Cytochrom_NNT WXD2_k127_1234433_6 1348908.KI518593_gene1851 0.0001591 47.0 COG4980@1|root,COG4980@2|Bacteria 2|Bacteria D gas vesicle protein ytxH - - - - - - - - - - - YtxH WXD2_k127_1234433_3 243090.RB11756 4.806e-55 203.0 COG0500@1|root,COG2226@2|Bacteria 2|Bacteria Q methyltransferase rrmA GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008270,GO:0008649,GO:0008757,GO:0008989,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0046872,GO:0046914,GO:0052912,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.187 ko:K00563,ko:K10947 - - R07233 RC00003 ko00000,ko01000,ko03000,ko03009 - - - Methyltransf_11,Methyltransf_25,Methyltransf_31 WXD2_k127_1234433_2 1254432.SCE1572_19565 1.413e-101 336.0 COG1878@1|root,COG1878@2|Bacteria,1MWWB@1224|Proteobacteria,42UUC@68525|delta/epsilon subdivisions,2WQFQ@28221|Deltaproteobacteria,2YZP1@29|Myxococcales 28221|Deltaproteobacteria S Putative cyclase - - - - - - - - - - - - Cyclase WXD2_k127_1234433_1 269799.Gmet_0222 1.877e-136 444.0 COG0225@1|root,COG0229@1|root,COG0225@2|Bacteria,COG0229@2|Bacteria,1MVUS@1224|Proteobacteria,42NB7@68525|delta/epsilon subdivisions,2WNTJ@28221|Deltaproteobacteria,43UJ7@69541|Desulfuromonadales 28221|Deltaproteobacteria C Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine msrA - 1.8.4.11,1.8.4.12 ko:K07304,ko:K12267 - - - - ko00000,ko01000 - - - PMSR,SelR WXD2_k127_1234433_5 909613.UO65_5584 5.11e-06 51.0 COG2374@1|root,COG4625@1|root,COG4733@1|root,COG5492@1|root,COG2374@2|Bacteria,COG4625@2|Bacteria,COG4733@2|Bacteria,COG5492@2|Bacteria,2I2E0@201174|Actinobacteria 201174|Actinobacteria M endonuclease exonuclease phosphatase - - - ko:K07004 - - - - ko00000 - - - Big_3_5,Big_5,CW_binding_2,DUF3616,Exo_endo_phos,LTD WXD2_k127_1244177_2 1288826.MSNKSG1_01983 2.168e-92 312.0 COG3239@1|root,COG3239@2|Bacteria,1MY4I@1224|Proteobacteria,1S726@1236|Gammaproteobacteria 1236|Gammaproteobacteria I Fatty acid desaturase - - 1.14.19.23,1.14.19.45 ko:K10255 ko02020,map02020 - - - ko00000,ko00001,ko01000,ko01004 - - - FA_desaturase WXD2_k127_1244177_5 887898.HMPREF0551_1304 7.121e-05 54.0 COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2VH3V@28216|Betaproteobacteria 28216|Betaproteobacteria T Diguanylate cyclase - - - - - - - - - - - - EAL,GGDEF,PAS_3,PAS_8,Response_reg WXD2_k127_1244177_0 269799.Gmet_1359 0.0 1181.0 COG2838@1|root,COG2838@2|Bacteria,1MV6Q@1224|Proteobacteria,42MY0@68525|delta/epsilon subdivisions,2WM7X@28221|Deltaproteobacteria 28221|Deltaproteobacteria C Isocitrate dehydrogenase NADP-dependent, monomeric type icd - 1.1.1.42 ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 M00009,M00010,M00173,M00740 R00267,R00268,R01899 RC00001,RC00084,RC00114,RC00626,RC02801 br01601,ko00000,ko00001,ko00002,ko01000 - - - IDH WXD2_k127_1244177_4 234267.Acid_5644 3.479e-26 109.0 COG1146@1|root,COG1146@2|Bacteria 2|Bacteria C 4 iron, 4 sulfur cluster binding - - - - - - - - - - - - Fer4 WXD2_k127_1244177_1 1245471.PCA10_21100 1.867e-288 904.0 COG1024@1|root,COG1250@1|root,COG1024@2|Bacteria,COG1250@2|Bacteria,1MU9P@1224|Proteobacteria,1RMZ8@1236|Gammaproteobacteria,1YFCX@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria I Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate fadB GO:0003674,GO:0003824,GO:0003857,GO:0004165,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0008692,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0016856,GO:0016860,GO:0016863,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 1.1.1.35,4.2.1.17,5.1.2.3,5.3.3.8 ko:K01782,ko:K01825 ko00071,ko00280,ko00281,ko00310,ko00362,ko00380,ko00410,ko00640,ko00650,ko00903,ko00930,ko01040,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00071,map00280,map00281,map00310,map00362,map00380,map00410,map00640,map00650,map00903,map00930,map01040,map01100,map01110,map01120,map01130,map01200,map01212 M00032,M00087 R01975,R03026,R03045,R03276,R04137,R04170,R04203,R04204,R04224,R04737,R04738,R04739,R04740,R04741,R04744,R04745,R04746,R04748,R04749,R04756,R05066,R05305,R06411,R06412,R06941,R06942,R07935,R07951,R08093,R08094 RC00029,RC00099,RC00117,RC00241,RC00525,RC00831,RC00834,RC00896,RC01078,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115 ko00000,ko00001,ko00002,ko01000 - - iLF82_1304.LF82_0614,iNRG857_1313.NRG857_19200 3HCDH,3HCDH_N,ECH_1 WXD2_k127_1244177_3 1323663.AROI01000009_gene3583 1.636e-70 240.0 COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,1RM93@1236|Gammaproteobacteria 1236|Gammaproteobacteria I Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed fadA GO:0003674,GO:0003824,GO:0003988,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016408,GO:0016740,GO:0016746,GO:0016747,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 2.3.1.16 ko:K00632 ko00071,ko00280,ko00281,ko00362,ko00592,ko00642,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00362,map00592,map00642,map01100,map01110,map01120,map01130,map01212 M00087,M00113 R00829,R00927,R01177,R03778,R03858,R03991,R04546,R04742,R04747,R05506,R05586,R07891,R07895,R07899,R08091,R08095 RC00004,RC00326,RC00405,RC01702,RC02728,RC02898,RC02955 ko00000,ko00001,ko00002,ko01000 - - iAPECO1_1312.APECO1_2612,iECNA114_1301.ECNA114_4154,iECOK1_1307.ECOK1_4314,iECP_1309.ECP_4058,iECS88_1305.ECS88_4293,iECSF_1327.ECSF_3702,iEcE24377_1341.EcE24377A_4364,iLF82_1304.LF82_0613,iNRG857_1313.NRG857_19195,iPC815.YPO3767 Thiolase_C,Thiolase_N WXD2_k127_1253453_5 448385.sce8988 2.118e-24 113.0 COG0671@1|root,COG0671@2|Bacteria,1N5FU@1224|Proteobacteria,43ADS@68525|delta/epsilon subdivisions,2WQ8X@28221|Deltaproteobacteria,2Z39W@29|Myxococcales 28221|Deltaproteobacteria I Acid phosphatase homologues - - 3.6.1.27 ko:K19302 ko00550,map00550 - R05627 RC00002 ko00000,ko00001,ko01000,ko01011 - - - PAP2 WXD2_k127_1253453_6 215803.DB30_7168 2.685e-24 121.0 COG0664@1|root,COG0664@2|Bacteria,1NBX3@1224|Proteobacteria,42UGQ@68525|delta/epsilon subdivisions,2WQY8@28221|Deltaproteobacteria,2YVI9@29|Myxococcales 28221|Deltaproteobacteria T Cyclic nucleotide-monophosphate binding domain - - - - - - - - - - - - cNMP_binding WXD2_k127_1253453_1 671143.DAMO_3054 1.042e-91 334.0 COG5621@1|root,COG5621@2|Bacteria,2NPFN@2323|unclassified Bacteria 2|Bacteria S Lipocalin-like domain attH - - - - - - - - - - - CrtC,Lipocalin_9 WXD2_k127_1253453_4 1173027.Mic7113_2642 6.393e-53 197.0 COG2367@1|root,COG2367@2|Bacteria,1G1KE@1117|Cyanobacteria,1HAFG@1150|Oscillatoriales 1117|Cyanobacteria V PFAM beta-lactamase - - 3.5.2.6 ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 M00627,M00628 R06363 RC01499 ko00000,ko00001,ko00002,ko01000,ko01504 - - - Beta-lactamase2 WXD2_k127_1253453_2 1379270.AUXF01000001_gene2056 1.323e-66 231.0 COG0219@1|root,COG0219@2|Bacteria,1ZUW2@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily - - 2.1.1.207 ko:K03216 - - - - ko00000,ko01000,ko03016 - - - SpoU_methylase WXD2_k127_1253453_0 1131269.AQVV01000009_gene1116 1.1e-138 473.0 COG0577@1|root,COG4591@1|root,COG0577@2|Bacteria,COG4591@2|Bacteria 2|Bacteria M lipoprotein localization to outer membrane lolE-2 - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD WXD2_k127_1253453_3 215803.DB30_2327 1.036e-63 226.0 COG1136@1|root,COG1136@2|Bacteria,1MU45@1224|Proteobacteria,42P96@68525|delta/epsilon subdivisions,2WMVB@28221|Deltaproteobacteria,2YUCK@29|Myxococcales 28221|Deltaproteobacteria P Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran WXD2_k127_1259112_1 1121920.AUAU01000013_gene1698 1.019e-50 182.0 COG2225@1|root,COG2225@2|Bacteria,3Y4MK@57723|Acidobacteria 57723|Acidobacteria C Belongs to the malate synthase family - - 2.3.3.9 ko:K01638 ko00620,ko00630,ko01100,ko01110,ko01120,ko01200,map00620,map00630,map01100,map01110,map01120,map01200 M00012 R00472 RC00004,RC00308,RC02747 ko00000,ko00001,ko00002,ko01000 - - - Malate_synthase WXD2_k127_1259112_0 1150599.MPHLEI_12591 0.0 1139.0 COG2224@1|root,COG2224@2|Bacteria,2I926@201174|Actinobacteria,232A9@1762|Mycobacteriaceae 201174|Actinobacteria C Isocitrate lyase aceAb GO:0003674,GO:0003824,GO:0004451,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0006102,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046421,GO:0046487,GO:0071704,GO:0072350 4.1.3.1 ko:K01637 ko00630,ko01100,ko01110,ko01120,ko01200,map00630,map01100,map01110,map01120,map01200 M00012 R00479 RC00311,RC00313 ko00000,ko00001,ko00002,ko01000 - - - ICL WXD2_k127_1265995_0 290397.Adeh_2170 1.568e-261 818.0 COG5013@1|root,COG5013@2|Bacteria,1MW9S@1224|Proteobacteria,42P6X@68525|delta/epsilon subdivisions,2WK8U@28221|Deltaproteobacteria 28221|Deltaproteobacteria C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - 1.7.5.1 ko:K00370 ko00910,ko01120,ko02020,map00910,map01120,map02020 M00529,M00530,M00804 R00798,R01106,R09497 RC02812 ko00000,ko00001,ko00002,ko01000 5.A.3.1 - - Molybdopterin,Molydop_binding WXD2_k127_1265995_1 1349767.GJA_3764 6.371e-42 168.0 COG1597@1|root,COG1597@2|Bacteria,1MY37@1224|Proteobacteria,2VZ36@28216|Betaproteobacteria,472UX@75682|Oxalobacteraceae 28216|Betaproteobacteria G Diacylglycerol kinase - - - - - - - - - - - - DAGK_cat WXD2_k127_1271676_3 1157490.EL26_16960 2.108e-28 127.0 COG2199@1|root,COG2200@1|root,COG2199@2|Bacteria,COG2200@2|Bacteria,1TQ94@1239|Firmicutes,4HAY4@91061|Bacilli,2785U@186823|Alicyclobacillaceae 91061|Bacilli T Putative diguanylate phosphodiesterase - - - - - - - - - - - - CBS,EAL,GGDEF WXD2_k127_1271676_7 870187.Thini_2050 0.0003493 54.0 2DMSB@1|root,32TC4@2|Bacteria,1R9F1@1224|Proteobacteria,1ST3S@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_1271676_1 313606.M23134_02387 1.148e-145 490.0 COG1012@1|root,COG1012@2|Bacteria,4NGHD@976|Bacteroidetes,47KZA@768503|Cytophagia 976|Bacteroidetes C Belongs to the aldehyde dehydrogenase family alkH - 1.2.1.3,1.2.1.68 ko:K00128,ko:K00154 ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130 M00135 R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146 RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500 ko00000,ko00001,ko00002,ko01000 - - - Aldedh WXD2_k127_1271676_6 861299.J421_1190 0.0001725 52.0 COG1629@1|root,COG1629@2|Bacteria,1ZVAV@142182|Gemmatimonadetes 2|Bacteria P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec WXD2_k127_1271676_0 1340493.JNIF01000003_gene3558 1.087e-251 792.0 COG1164@1|root,COG1164@2|Bacteria,3Y2SB@57723|Acidobacteria 57723|Acidobacteria E Angiotensin-converting enzyme - - 3.4.15.1 ko:K01283 ko04614,ko04924,ko05142,ko05410,map04614,map04924,map05142,map05410 - - - ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 - - - Peptidase_M2 WXD2_k127_1281068_1 575540.Isop_2807 3.91e-85 315.0 COG5276@1|root,COG5276@2|Bacteria,2IXW8@203682|Planctomycetes 203682|Planctomycetes S LVIVD repeat - - - - - - - - - - - - LVIVD WXD2_k127_1281068_0 1123508.JH636445_gene6642 1.344e-148 491.0 COG3827@1|root,COG3827@2|Bacteria,2IXVY@203682|Planctomycetes 203682|Planctomycetes - - - - - - - - - - - - - - - WXD2_k127_1298223_4 525897.Dbac_3233 1.187e-39 153.0 COG3845@1|root,COG3845@2|Bacteria,1NT0H@1224|Proteobacteria,42NTY@68525|delta/epsilon subdivisions,2WK4F@28221|Deltaproteobacteria,2M8EW@213115|Desulfovibrionales 28221|Deltaproteobacteria S PFAM ABC transporter related - - 3.6.3.17 ko:K02056 - M00221 - - ko00000,ko00002,ko01000,ko02000 3.A.1.2 - - ABC_tran WXD2_k127_1298223_1 379066.GAU_0026 4.036e-75 263.0 COG1744@1|root,COG1744@2|Bacteria,1ZSMV@142182|Gemmatimonadetes 142182|Gemmatimonadetes S ABC transporter substrate-binding protein PnrA-like - - - ko:K07335 - - - - ko00000 - - - Bmp WXD2_k127_1298223_8 234267.Acid_1509 3.072e-16 93.0 COG4219@1|root,COG4219@2|Bacteria,3Y301@57723|Acidobacteria 57723|Acidobacteria KT Peptidase M56 - - - - - - - - - - - - - WXD2_k127_1298223_0 289376.THEYE_A0208 1.176e-163 524.0 COG0108@1|root,COG0807@1|root,COG0108@2|Bacteria,COG0807@2|Bacteria,3J0E0@40117|Nitrospirae 40117|Nitrospirae H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate ribBA - 3.5.4.25,4.1.99.12 ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 M00125,M00840 R00425,R07281 RC00293,RC01792,RC01815,RC02504 ko00000,ko00001,ko00002,ko01000 - - - DHBP_synthase,GTP_cyclohydro2 WXD2_k127_1298223_3 1385511.N783_19030 2.133e-44 170.0 COG3483@1|root,COG3483@2|Bacteria,1VTTH@1239|Firmicutes,4HU1U@91061|Bacilli,2Y9VC@289201|Pontibacillus 91061|Bacilli E Tryptophan 2,3-dioxygenase - - - - - - - - - - - - Trp_dioxygenase WXD2_k127_1298223_5 682795.AciX8_3035 6.72e-23 113.0 COG4219@1|root,COG4219@2|Bacteria,3Y301@57723|Acidobacteria,2JIG4@204432|Acidobacteriia 204432|Acidobacteriia KT Peptidase M56 - - - - - - - - - - - - - WXD2_k127_1298223_7 1382359.JIAL01000001_gene981 8.606e-17 91.0 COG0457@1|root,COG0457@2|Bacteria,3Y3N5@57723|Acidobacteria,2JISD@204432|Acidobacteriia 204432|Acidobacteriia S Tetratricopeptide repeat - - - - - - - - - - - - TPR_2,TPR_8 WXD2_k127_1298223_6 234267.Acid_6018 6.938e-18 95.0 COG0810@1|root,COG0810@2|Bacteria 2|Bacteria M energy transducer activity - - - ko:K02487,ko:K03832,ko:K06596 ko02020,ko02025,map02020,map02025 M00507 - - ko00000,ko00001,ko00002,ko01001,ko02000,ko02022,ko02035 2.C.1.1 - - CarbopepD_reg_2,FabA,KAsynt_C_assoc,Ketoacyl-synt_C,TonB_2,TonB_C,ketoacyl-synt WXD2_k127_1298223_2 1267535.KB906767_gene4741 9.379e-49 183.0 COG0811@1|root,COG0811@2|Bacteria,3Y2M4@57723|Acidobacteria,2JI9T@204432|Acidobacteriia 204432|Acidobacteriia U MotA TolQ ExbB proton channel - - - ko:K03561,ko:K03562 ko01120,map01120 - - - ko00000,ko02000 1.A.30.2.1,1.A.30.2.2 - - MotA_ExbB WXD2_k127_1311142_0 1304880.JAGB01000002_gene1765 9.283e-301 941.0 COG0178@1|root,COG0178@2|Bacteria,1TPIJ@1239|Firmicutes,2485F@186801|Clostridia 186801|Clostridia L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate uvrA - - ko:K03701 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - ABC_tran WXD2_k127_1311142_4 452637.Oter_2363 3.819e-43 167.0 2CFSQ@1|root,32S2E@2|Bacteria,46VN9@74201|Verrucomicrobia 74201|Verrucomicrobia - - - - - - - - - - - - - - - WXD2_k127_1311142_1 234267.Acid_5076 1.665e-132 430.0 COG3285@1|root,COG3285@2|Bacteria,3Y74I@57723|Acidobacteria 57723|Acidobacteria L dna ligase - - 6.5.1.1 ko:K01971 ko03450,map03450 - R00381 RC00005 ko00000,ko00001,ko01000,ko03400 - - - - WXD2_k127_1311142_2 215803.DB30_0400 1.308e-116 386.0 COG1793@1|root,COG1793@2|Bacteria,1R4SI@1224|Proteobacteria,438FV@68525|delta/epsilon subdivisions,2X3QT@28221|Deltaproteobacteria,2YWVJ@29|Myxococcales 28221|Deltaproteobacteria L ATP dependent DNA ligase domain protein - - - - - - - - - - - - DNA_ligase_A_C,DNA_ligase_A_M WXD2_k127_1311142_3 1449347.JQLN01000004_gene6523 6.245e-88 304.0 COG3385@1|root,COG3385@2|Bacteria,2GKQB@201174|Actinobacteria,2M2RU@2063|Kitasatospora 201174|Actinobacteria L Insertion element 4 transposase N-terminal - - - - - - - - - - - - DDE_Tnp_1,Nterm_IS4 WXD2_k127_1315703_2 883126.HMPREF9710_00300 1.546e-40 157.0 2DNKM@1|root,32XZQ@2|Bacteria,1N31C@1224|Proteobacteria,2W4JX@28216|Betaproteobacteria 28216|Betaproteobacteria S Protein of unknown function (DUF1203) - - - - - - - - - - - - DUF1203 WXD2_k127_1315703_3 1121346.KB899881_gene2312 8.178e-14 82.0 COG0760@1|root,COG0760@2|Bacteria,1TX3R@1239|Firmicutes,4IQKZ@91061|Bacilli,276F6@186822|Paenibacillaceae 91061|Bacilli O Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins prsA - 5.2.1.8 ko:K07533 - - - - ko00000,ko01000,ko03110 - - - Rotamase_3,SurA_N_3 WXD2_k127_1315703_0 56780.SYN_00640 2.871e-126 419.0 COG0305@1|root,COG0305@2|Bacteria,1MUG9@1224|Proteobacteria,42M7X@68525|delta/epsilon subdivisions,2WJCA@28221|Deltaproteobacteria,2MQ50@213462|Syntrophobacterales 28221|Deltaproteobacteria L it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins dnaB - 3.6.4.12 ko:K02314 ko03030,ko04112,map03030,map04112 - - - ko00000,ko00001,ko01000,ko03032 - - - DnaB,DnaB_C WXD2_k127_1315703_1 204669.Acid345_2529 7.173e-87 317.0 COG1030@1|root,COG1030@2|Bacteria,3Y31N@57723|Acidobacteria,2JHS7@204432|Acidobacteriia 204432|Acidobacteriia O NfeD-like C-terminal, partner-binding - - - ko:K07403 - - - - ko00000 - - - NfeD WXD2_k127_1316329_15 1499967.BAYZ01000184_gene4554 3.434e-05 55.0 COG4995@1|root,COG4995@2|Bacteria 2|Bacteria S CHAT domain - - - - - - - - - - - - CHAT WXD2_k127_1316329_3 1242864.D187_010069 1.646e-56 219.0 COG0515@1|root,COG0515@2|Bacteria,1MV1P@1224|Proteobacteria,42Q67@68525|delta/epsilon subdivisions,2WKZ1@28221|Deltaproteobacteria,2YUQ6@29|Myxococcales 28221|Deltaproteobacteria KLT serine threonine protein kinase - - 2.7.11.1 ko:K08884,ko:K12132 - - - - ko00000,ko01000,ko01001 - - - AAA_16,Pkinase,TPR_12,zinc_ribbon_2 WXD2_k127_1316329_6 357808.RoseRS_0666 4.643e-48 188.0 COG0457@1|root,COG0515@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,2G7ZS@200795|Chloroflexi,3757W@32061|Chloroflexia 32061|Chloroflexia KLT Serine threonine protein kinase - - 2.7.11.1 ko:K08884,ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase,TPR_11,TPR_16,TPR_2,TPR_6,TPR_8 WXD2_k127_1316329_11 1304874.JAFY01000002_gene93 9.335e-17 90.0 COG1716@1|root,COG1716@2|Bacteria 2|Bacteria T histone H2A K63-linked ubiquitination - - - - - - - - - - - - FHA,Yop-YscD_cpl WXD2_k127_1316329_13 436229.JOEH01000015_gene6032 4.001e-09 69.0 COG0654@1|root,COG1716@1|root,COG0654@2|Bacteria,COG1716@2|Bacteria,2I9P3@201174|Actinobacteria,2NKMN@228398|Streptacidiphilus 201174|Actinobacteria CHT Forkhead associated domain - - - - - - - - - - - - FHA WXD2_k127_1316329_9 696369.KI912183_gene1891 8.705e-24 117.0 COG0265@1|root,COG0265@2|Bacteria,1UYZJ@1239|Firmicutes 1239|Firmicutes O Trypsin-like peptidase domain - - - - - - - - - - - - Trypsin_2 WXD2_k127_1316329_5 1382306.JNIM01000001_gene897 3.031e-52 200.0 COG0631@1|root,COG0631@2|Bacteria,2G6R4@200795|Chloroflexi 200795|Chloroflexi T SMART protein phosphatase 2C domain protein - - 3.1.3.16 ko:K20074 - - - - ko00000,ko01000,ko01009 - - - PP2C,PP2C_2 WXD2_k127_1316329_2 1144275.COCOR_05743 3.993e-84 300.0 COG1716@1|root,COG2114@1|root,COG2203@1|root,COG1716@2|Bacteria,COG2114@2|Bacteria,COG2203@2|Bacteria,1RAHZ@1224|Proteobacteria,42UGY@68525|delta/epsilon subdivisions,2WQPI@28221|Deltaproteobacteria 28221|Deltaproteobacteria T Adenylyl- / guanylyl cyclase, catalytic domain - - 4.6.1.1 ko:K01768 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000 - - - FHA,GAF,GAF_2,Guanylate_cyc WXD2_k127_1316329_8 1121468.AUBR01000050_gene2015 2.32e-31 131.0 COG0681@1|root,COG0681@2|Bacteria,1V7H9@1239|Firmicutes,24HHW@186801|Clostridia,42G4C@68295|Thermoanaerobacterales 186801|Clostridia U PFAM Peptidase S24 S26A S26B, conserved region lepB - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24 WXD2_k127_1316329_10 204669.Acid345_3258 9.077e-17 83.0 COG3369@1|root,COG3369@2|Bacteria,3Y5KG@57723|Acidobacteria,2JJXU@204432|Acidobacteriia 204432|Acidobacteriia S PFAM Iron sulphur-containing domain, CDGSH-type - - - - - - - - - - - - zf-CDGSH WXD2_k127_1316329_1 562970.Btus_0655 3.067e-94 320.0 COG1522@1|root,COG1522@2|Bacteria,1V6TH@1239|Firmicutes,4HAAQ@91061|Bacilli 91061|Bacilli K Transcriptional regulator (AsnC family) - - - - - - - - - - - - HTH_AsnC-type WXD2_k127_1316329_12 530564.Psta_3690 6.721e-15 80.0 COG1547@1|root,COG1547@2|Bacteria,2J0XW@203682|Planctomycetes 203682|Planctomycetes S Domain of unknown function (DUF309) - - - ko:K09763 - - - - ko00000 - - - DUF309 WXD2_k127_1316329_0 1267533.KB906735_gene4826 9.269e-137 442.0 COG0473@1|root,COG0473@2|Bacteria,3Y2VW@57723|Acidobacteria,2JIUD@204432|Acidobacteriia 204432|Acidobacteriia CE Isocitrate/isopropylmalate dehydrogenase - - 1.1.1.41 ko:K00030 ko00020,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010 R00709 RC00114 br01601,ko00000,ko00001,ko00002,ko01000 - - - Iso_dh WXD2_k127_1316329_7 706587.Desti_1483 3.63e-33 143.0 COG3178@1|root,COG3178@2|Bacteria,1MXCH@1224|Proteobacteria,42TUJ@68525|delta/epsilon subdivisions,2WQ4U@28221|Deltaproteobacteria 28221|Deltaproteobacteria S phosphotransferase related to Ser Thr protein kinases - - 2.7.1.221 ko:K07102 ko00520,ko01100,map00520,map01100 - R08968,R11024 RC00002,RC00078 ko00000,ko00001,ko01000 - - - APH WXD2_k127_1316329_4 436308.Nmar_1740 1.557e-53 198.0 COG0652@1|root,arCOG04767@2157|Archaea,41T32@651137|Thaumarchaeota 651137|Thaumarchaeota O peptidyl-prolyl cis-trans isomerase - - 5.2.1.8 ko:K03768 - - - - ko00000,ko01000,ko03110 - - - Pro_isomerase WXD2_k127_1316329_14 1120953.AUBH01000005_gene2232 1.29e-06 61.0 COG3595@1|root,COG3595@2|Bacteria,1RFCY@1224|Proteobacteria,1S5RB@1236|Gammaproteobacteria,467PX@72275|Alteromonadaceae 1236|Gammaproteobacteria - - - - - - - - - - - - - - DUF4097 WXD2_k127_1316329_17 1382359.JIAL01000001_gene2753 0.0008021 51.0 COG1413@1|root,COG1413@2|Bacteria,3Y2TB@57723|Acidobacteria,2JHKS@204432|Acidobacteriia 204432|Acidobacteriia C HEAT repeats - - - - - - - - - - - - HEAT_2,zf-HC2 WXD2_k127_1317229_0 1242864.D187_008994 0.0 1191.0 COG0209@1|root,COG0209@2|Bacteria,1MUJ8@1224|Proteobacteria,42N8M@68525|delta/epsilon subdivisions,2WJRT@28221|Deltaproteobacteria,2YUBZ@29|Myxococcales 28221|Deltaproteobacteria F Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen nrdA1 - 1.17.4.1 ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R02017,R02018,R02019,R02024 RC00613 ko00000,ko00001,ko00002,ko01000,ko03400 - - - Ribonuc_red_2_N,Ribonuc_red_lgC WXD2_k127_1329786_4 414684.RC1_2702 4.998e-34 135.0 COG2902@1|root,COG2902@2|Bacteria,1MXNV@1224|Proteobacteria,2TS89@28211|Alphaproteobacteria,2JPCA@204441|Rhodospirillales 204441|Rhodospirillales E NAD-specific glutamate dehydrogenase gdhA - 1.4.1.2 ko:K15371 ko00220,ko00250,ko00430,ko00910,ko01100,map00220,map00250,map00430,map00910,map01100 - R00243 RC00006,RC02799 ko00000,ko00001,ko01000 - - - Bac_GDH WXD2_k127_1329786_5 351160.RCIX211 2.041e-11 77.0 COG1807@1|root,arCOG03981@1|root,arCOG00566@2157|Archaea,arCOG03981@2157|Archaea,2Y4H0@28890|Euryarchaeota 28890|Euryarchaeota M Protein of unknown function (DUF2723) - - - - - - - - - - - - PMT_2 WXD2_k127_1329786_0 1278307.KB906973_gene1275 2.52e-176 579.0 COG1024@1|root,COG1250@1|root,COG1024@2|Bacteria,COG1250@2|Bacteria,1MU9P@1224|Proteobacteria,1RMZ8@1236|Gammaproteobacteria,2QHU0@267894|Psychromonadaceae 1236|Gammaproteobacteria I 3-hydroxyacyl-CoA dehydrogenase fadB GO:0003674,GO:0003824,GO:0003857,GO:0004165,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0008692,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0016856,GO:0016860,GO:0016863,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 1.1.1.35,4.2.1.17,5.1.2.3,5.3.3.8 ko:K01782,ko:K01825 ko00071,ko00280,ko00281,ko00310,ko00362,ko00380,ko00410,ko00640,ko00650,ko00903,ko00930,ko01040,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00071,map00280,map00281,map00310,map00362,map00380,map00410,map00640,map00650,map00903,map00930,map01040,map01100,map01110,map01120,map01130,map01200,map01212 M00032,M00087 R01975,R03026,R03045,R03276,R04137,R04170,R04203,R04204,R04224,R04737,R04738,R04739,R04740,R04741,R04744,R04745,R04746,R04748,R04749,R04756,R05066,R05305,R06411,R06412,R06941,R06942,R07935,R07951,R08093,R08094 RC00029,RC00099,RC00117,RC00241,RC00525,RC00831,RC00834,RC00896,RC01078,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115 ko00000,ko00001,ko00002,ko01000 - - iLF82_1304.LF82_0614,iNRG857_1313.NRG857_19200 3HCDH,3HCDH_N,ECH_1 WXD2_k127_1329786_1 880073.Calab_3204 5.527e-164 535.0 COG1022@1|root,COG1022@2|Bacteria,2NNTM@2323|unclassified Bacteria 2|Bacteria I COGs COG1022 Long-chain acyl-CoA synthetase (AMP-forming) - - 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding WXD2_k127_1329786_3 448385.sce9075 5.275e-72 269.0 COG1668@1|root,COG1668@2|Bacteria,1R62N@1224|Proteobacteria 1224|Proteobacteria CP COG1668 ABC-type Na efflux pump, permease component - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 WXD2_k127_1329786_2 448385.sce9074 3.33e-96 324.0 COG4152@1|root,COG4152@2|Bacteria,1QUPV@1224|Proteobacteria 1224|Proteobacteria S ABC transporter, (ATP-binding protein) - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran,DUF4162 WXD2_k127_1354022_5 215803.DB30_8718 1.243e-12 70.0 COG4206@1|root,COG4206@2|Bacteria,1QTTF@1224|Proteobacteria,43C3N@68525|delta/epsilon subdivisions,2X7EC@28221|Deltaproteobacteria,2YWP0@29|Myxococcales 28221|Deltaproteobacteria H TonB dependent receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - Plug,TonB_dep_Rec WXD2_k127_1354022_1 290397.Adeh_2955 1.025e-105 355.0 COG0513@1|root,COG0513@2|Bacteria,1MU49@1224|Proteobacteria,42MGZ@68525|delta/epsilon subdivisions,2WIY6@28221|Deltaproteobacteria 28221|Deltaproteobacteria L Belongs to the DEAD box helicase family rhlE - 3.6.4.13 ko:K11927 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - DEAD,Helicase_C WXD2_k127_1354022_4 399739.Pmen_1243 2.598e-38 148.0 2CNK3@1|root,32SH9@2|Bacteria,1N02U@1224|Proteobacteria,1SA77@1236|Gammaproteobacteria,1YGFT@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria S Protein of Unknown function (DUF2784) - - - - - - - - - - - - DUF2784 WXD2_k127_1354022_0 215803.DB30_4295 1.367e-139 465.0 COG0737@1|root,COG0737@2|Bacteria,1MX03@1224|Proteobacteria,42Q71@68525|delta/epsilon subdivisions,2WK8Q@28221|Deltaproteobacteria,2YYY4@29|Myxococcales 28221|Deltaproteobacteria F 5'-nucleotidase, C-terminal domain - - 3.1.3.5 ko:K01081 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 - R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346 RC00017 ko00000,ko00001,ko01000 - - - 5_nucleotid_C,Metallophos WXD2_k127_1354022_3 1449069.JMLO01000006_gene1024 6.187e-44 168.0 2DM5T@1|root,31U0Y@2|Bacteria,2HHDM@201174|Actinobacteria,4FXV2@85025|Nocardiaceae 201174|Actinobacteria S Domain of unknown function (DUF4126) - - - - - - - - - - - - DUF4126 WXD2_k127_1354022_2 1547437.LL06_21680 1.341e-74 263.0 COG1181@1|root,COG1181@2|Bacteria,1MUTB@1224|Proteobacteria,2TREC@28211|Alphaproteobacteria,43IIJ@69277|Phyllobacteriaceae 28211|Alphaproteobacteria M Belongs to the D-alanine--D-alanine ligase family MA20_01825 - 6.3.2.4 ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 - R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Dala_Dala_lig_C,Dala_Dala_lig_N WXD2_k127_1357693_0 290397.Adeh_2170 0.0 1042.0 COG5013@1|root,COG5013@2|Bacteria,1MW9S@1224|Proteobacteria,42P6X@68525|delta/epsilon subdivisions,2WK8U@28221|Deltaproteobacteria 28221|Deltaproteobacteria C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - 1.7.5.1 ko:K00370 ko00910,ko01120,ko02020,map00910,map01120,map02020 M00529,M00530,M00804 R00798,R01106,R09497 RC02812 ko00000,ko00001,ko00002,ko01000 5.A.3.1 - - Molybdopterin,Molydop_binding WXD2_k127_1357693_2 118005.AWNK01000001_gene2110 1.852e-172 557.0 COG1140@1|root,COG1140@2|Bacteria 2|Bacteria C nitrate reductase beta subunit narH GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006091,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009898,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0031235,GO:0032991,GO:0033554,GO:0042126,GO:0043436,GO:0044237,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0048037,GO:0050896,GO:0051536,GO:0051538,GO:0051539,GO:0051540,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204,GO:2001057 1.7.5.1 ko:K00371 ko00910,ko01120,ko02020,map00910,map01120,map02020 M00529,M00530,M00804 R00798,R01106,R09497 RC02812 ko00000,ko00001,ko00002,ko01000 5.A.3.1 - iAF987.Gmet_1021,iEcE24377_1341.EcE24377A_1376,iEcolC_1368.EcolC_2189 Fer4_11,Nitr_red_bet_C WXD2_k127_1357693_8 1232410.KI421415_gene2945 7.897e-13 81.0 COG2180@1|root,COG2180@2|Bacteria,1NBVT@1224|Proteobacteria,42WMK@68525|delta/epsilon subdivisions,2WS6W@28221|Deltaproteobacteria,43VKV@69541|Desulfuromonadales 28221|Deltaproteobacteria C Nitrate reductase delta subunit - - - ko:K00373 ko02020,map02020 - - - ko00000,ko00001 - - - Nitrate_red_del WXD2_k127_1357693_6 671143.DAMO_0774 5.707e-45 171.0 COG2181@1|root,COG2181@2|Bacteria 2|Bacteria C nitrate reductase activity narI GO:0001666,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006950,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009628,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0036293,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0046906,GO:0048037,GO:0050896,GO:0055114,GO:0070469,GO:0070470,GO:0070482,GO:0071944,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901363,GO:1902494,GO:1990204 1.7.5.1 ko:K00370,ko:K00374,ko:K02575 ko00910,ko01120,ko02020,map00910,map01120,map02020 M00529,M00530,M00615,M00804 R00798,R01106,R09497 RC02812 ko00000,ko00001,ko00002,ko01000,ko02000 2.A.1.8,5.A.3.1 - iEC042_1314.EC042_1594,iECABU_c1320.ECABU_c17020,iECUMN_1333.ECUMN_1718,iNJ661.Rv1164,iSF_1195.SF1230,ic_1306.c1897 Nitrate_red_gam WXD2_k127_1357693_4 518766.Rmar_0322 8.253e-126 422.0 COG0699@1|root,COG0699@2|Bacteria,4NTQB@976|Bacteroidetes,1FJXE@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes S Dynamin family - - - - - - - - - - - - Dynamin_N WXD2_k127_1357693_1 511051.CSE_10010 1.094e-180 577.0 COG0017@1|root,COG0017@2|Bacteria 2|Bacteria J Asparaginyl-tRNA synthetase asnS GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 ko:K01893 ko00970,map00970 M00359,M00360 R03648 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_2,tRNA_anti-codon WXD2_k127_1357693_3 944480.ATUV01000002_gene291 3.168e-160 522.0 COG0595@1|root,COG0595@2|Bacteria,1MUGV@1224|Proteobacteria,42M65@68525|delta/epsilon subdivisions,2WIQ9@28221|Deltaproteobacteria,2M6H6@213113|Desulfurellales 28221|Deltaproteobacteria S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay rnj - - ko:K12574 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - Lactamase_B,Lactamase_B_2,RMMBL WXD2_k127_1357693_5 215803.DB30_8136 1.362e-77 269.0 COG1968@1|root,COG1968@2|Bacteria,1MX02@1224|Proteobacteria,42N67@68525|delta/epsilon subdivisions,2WPKC@28221|Deltaproteobacteria,2YVGU@29|Myxococcales 28221|Deltaproteobacteria V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin uppP - 3.6.1.27 ko:K06153 ko00550,map00550 - R05627 RC00002 ko00000,ko00001,ko01000,ko01011 - - - BacA WXD2_k127_1357693_7 1157637.KB892094_gene3045 1.803e-34 133.0 COG0634@1|root,COG0634@2|Bacteria,2GMDZ@201174|Actinobacteria 201174|Actinobacteria F Belongs to the purine pyrimidine phosphoribosyltransferase family hpt - 2.4.2.8 ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 - R00190,R01132,R01229,R02142,R08237,R08238,R08245 RC00063,RC00122 ko00000,ko00001,ko01000 - - - Pribosyltran WXD2_k127_1385840_1 1122603.ATVI01000007_gene1801 6.924e-73 253.0 COG1297@1|root,COG1297@2|Bacteria,1N7SK@1224|Proteobacteria,1RNC8@1236|Gammaproteobacteria,1X4Q2@135614|Xanthomonadales 135614|Xanthomonadales S transporter - - - - - - - - - - - - OPT WXD2_k127_1385840_0 903818.KI912268_gene1912 5.342e-142 483.0 COG5373@1|root,COG5373@2|Bacteria,3Y2GV@57723|Acidobacteria 57723|Acidobacteria S Predicted membrane protein (DUF2339) - - - - - - - - - - - - DUF2339 WXD2_k127_1386200_1 871963.Desdi_2340 1.331e-46 180.0 COG0539@1|root,COG0761@1|root,COG0539@2|Bacteria,COG0761@2|Bacteria,1TQ9N@1239|Firmicutes,247UK@186801|Clostridia,26081@186807|Peptococcaceae 186801|Clostridia IJM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis ispH - 1.17.7.4 ko:K02945,ko:K03527 ko00900,ko01100,ko01110,ko01130,ko03010,map00900,map01100,map01110,map01130,map03010 M00096,M00178 R05884,R08210 RC01137,RC01487 br01610,ko00000,ko00001,ko00002,ko01000,ko03011 - - - LYTB,S1 WXD2_k127_1386200_5 929703.KE386491_gene628 3.454e-06 57.0 COG3170@1|root,COG3170@2|Bacteria,4NF47@976|Bacteroidetes,47M60@768503|Cytophagia 976|Bacteroidetes NU Protein of unknown function (DUF3108) - - - - - - - - - - - - DUF3108 WXD2_k127_1386200_4 1006000.GKAS_00969 4.41e-12 76.0 COG0745@1|root,COG0745@2|Bacteria,1MVCB@1224|Proteobacteria,1RMW7@1236|Gammaproteobacteria 1236|Gammaproteobacteria K Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain cpxR GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010810,GO:0019219,GO:0019222,GO:0030155,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - ko:K07662,ko:K19610 ko01503,ko02020,map01503,map02020 M00447,M00727,M00728,M00770 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C WXD2_k127_1386200_3 501479.ACNW01000113_gene4080 4.88e-24 115.0 COG3842@1|root,COG3842@2|Bacteria,1MU3I@1224|Proteobacteria,2TQMJ@28211|Alphaproteobacteria 28211|Alphaproteobacteria P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system - - - ko:K02052 ko02024,map02024 M00193 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11 - - ABC_tran,TOBE_2 WXD2_k127_1386200_6 278963.ATWD01000001_gene2875 0.0005953 46.0 2BI39@1|root,32C8D@2|Bacteria,3Y85Y@57723|Acidobacteria 57723|Acidobacteria - - - - - - - - - - - - - - - WXD2_k127_1386200_2 1227739.Hsw_1099 3.304e-38 156.0 COG0697@1|root,COG0697@2|Bacteria,4NGZ3@976|Bacteroidetes,47PHD@768503|Cytophagia 976|Bacteroidetes EG EamA-like transporter family - - - - - - - - - - - - EamA WXD2_k127_1386200_0 1040983.AXAE01000014_gene4976 4.235e-55 208.0 COG0747@1|root,COG0747@2|Bacteria,1MUZH@1224|Proteobacteria,2TR1D@28211|Alphaproteobacteria,43IIH@69277|Phyllobacteriaceae 28211|Alphaproteobacteria E Bacterial extracellular solute-binding proteins, family 5 Middle - - - ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 - - SBP_bac_5 WXD2_k127_1396333_8 445961.IW15_05165 9.455e-06 53.0 COG2133@1|root,COG2133@2|Bacteria,4NF0B@976|Bacteroidetes,1HX9D@117743|Flavobacteriia,3ZPFB@59732|Chryseobacterium 976|Bacteroidetes G Glucose / Sorbosone dehydrogenase - - - - - - - - - - - - CBM_6,GSDH WXD2_k127_1396333_6 1286093.C266_07815 8.212e-20 106.0 COG4258@1|root,COG4258@2|Bacteria,1QTXZ@1224|Proteobacteria,2VM6Q@28216|Betaproteobacteria,1K12F@119060|Burkholderiaceae 28216|Betaproteobacteria S TIGRFAM hopanoid biosynthesis associated RND transporter like protein HpnN hpnN - - ko:K07003 - - - - ko00000 - - - MMPL WXD2_k127_1396333_2 1394178.AWOO02000052_gene6091 1.942e-68 247.0 COG0157@1|root,COG0157@2|Bacteria,2I2IP@201174|Actinobacteria,4EM5W@85012|Streptosporangiales 201174|Actinobacteria H Quinolinate phosphoribosyl transferase, N-terminal domain nadC - 2.4.2.19 ko:K00767 ko00760,ko01100,map00760,map01100 M00115 R03348 RC02877 ko00000,ko00001,ko00002,ko01000 - - - QRPTase_C,QRPTase_N WXD2_k127_1396333_0 1125863.JAFN01000001_gene2065 2.911e-72 255.0 COG2199@1|root,COG3706@2|Bacteria,1R7HC@1224|Proteobacteria,42M4Q@68525|delta/epsilon subdivisions,2X5DU@28221|Deltaproteobacteria 28221|Deltaproteobacteria T Diguanylate cyclase - - - - - - - - - - - iAF987.Gmet_0069 GGDEF,Response_reg WXD2_k127_1396333_9 671143.DAMO_0742 2.606e-05 52.0 COG2198@1|root,COG2198@2|Bacteria 2|Bacteria T Histidine kinase - - - - - - - - - - - - Hpt WXD2_k127_1396333_5 357808.RoseRS_4252 2.084e-31 131.0 COG2006@1|root,COG2006@2|Bacteria 2|Bacteria U 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - - - - - - - - - - CBM9_1,CBM9_2,DUF362 WXD2_k127_1396333_7 634176.NT05HA_1101 1.418e-06 56.0 COG0265@1|root,COG0265@2|Bacteria,1MU63@1224|Proteobacteria,1RN9T@1236|Gammaproteobacteria,1Y6X5@135625|Pasteurellales 135625|Pasteurellales O Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain degS GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009987,GO:0010033,GO:0016020,GO:0016787,GO:0017171,GO:0019538,GO:0031224,GO:0031226,GO:0033554,GO:0035966,GO:0035967,GO:0042221,GO:0043170,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051716,GO:0051788,GO:0070011,GO:0070887,GO:0071218,GO:0071310,GO:0071704,GO:0071944,GO:0140096,GO:1901564 - ko:K04691 - - - - ko00000,ko01000,ko01002 - - - PDZ_2,Trypsin_2 WXD2_k127_1396333_4 1267534.KB906755_gene4692 1.876e-44 180.0 COG0642@1|root,COG2205@2|Bacteria 1267534.KB906755_gene4692|- T PhoQ Sensor - - - - - - - - - - - - - WXD2_k127_1396333_3 555088.DealDRAFT_2158 1.141e-49 185.0 COG0745@1|root,COG0745@2|Bacteria,1TPQG@1239|Firmicutes,248Z4@186801|Clostridia 186801|Clostridia T response regulator receiver yycF - - ko:K07668 ko02020,map02020 M00459 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C WXD2_k127_1396333_1 1131813.AQVT01000001_gene292 5.656e-69 246.0 COG0031@1|root,COG0031@2|Bacteria,1MUBE@1224|Proteobacteria,2TS33@28211|Alphaproteobacteria,1JQTK@119045|Methylobacteriaceae 28211|Alphaproteobacteria E Cysteine synthase A cysK - 2.5.1.47 ko:K01738 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 M00021 R00897,R03601,R04859 RC00020,RC02814,RC02821 ko00000,ko00001,ko00002,ko01000 - - - PALP WXD2_k127_1398908_4 861299.J421_4066 1.831e-52 196.0 COG0515@1|root,COG0515@2|Bacteria,1ZTGA@142182|Gemmatimonadetes 142182|Gemmatimonadetes KLT Protein kinase domain - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase WXD2_k127_1398908_6 580327.Tthe_0532 9.102e-36 139.0 COG0432@1|root,COG0432@2|Bacteria,1V6J7@1239|Firmicutes,24J8G@186801|Clostridia,42GHI@68295|Thermoanaerobacterales 186801|Clostridia S PFAM Uncharacterised protein family UPF0047 - - - - - - - - - - - - UPF0047 WXD2_k127_1398908_2 237368.SCABRO_01822 3.918e-110 375.0 COG1249@1|root,COG1249@2|Bacteria,2IYD2@203682|Planctomycetes 203682|Planctomycetes C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - - - - - - - - - - Pyr_redox_2,Pyr_redox_dim WXD2_k127_1398908_5 1031711.RSPO_c01079 4.911e-43 162.0 COG2032@1|root,COG2032@2|Bacteria,1N26J@1224|Proteobacteria,2VT83@28216|Betaproteobacteria,1KI6D@119060|Burkholderiaceae 28216|Betaproteobacteria P Destroys radicals which are normally produced within the cells and which are toxic to biological systems sodC - 1.15.1.1 ko:K04565 ko04146,ko04213,ko05014,ko05016,ko05020,map04146,map04213,map05014,map05016,map05020 - - - ko00000,ko00001,ko01000 - - - Sod_Cu WXD2_k127_1398908_0 404589.Anae109_4112 3.319e-123 404.0 COG3829@1|root,COG3829@2|Bacteria,1NU8B@1224|Proteobacteria,42MFH@68525|delta/epsilon subdivisions,2WIRW@28221|Deltaproteobacteria 28221|Deltaproteobacteria KT PFAM sigma-54 factor interaction domain-containing protein - - - - - - - - - - - - HTH_8,PAS_9,Sigma54_activat WXD2_k127_1398908_9 404589.Anae109_4112 3.269e-18 88.0 COG3829@1|root,COG3829@2|Bacteria,1NU8B@1224|Proteobacteria,42MFH@68525|delta/epsilon subdivisions,2WIRW@28221|Deltaproteobacteria 28221|Deltaproteobacteria KT PFAM sigma-54 factor interaction domain-containing protein - - - - - - - - - - - - HTH_8,PAS_9,Sigma54_activat WXD2_k127_1398908_8 1074488.AGBX01000001_gene424 1.462e-30 130.0 COG0664@1|root,COG0664@2|Bacteria,2GMPN@201174|Actinobacteria,4FBMZ@85020|Dermabacteraceae 201174|Actinobacteria K helix_turn_helix, cAMP Regulatory protein glxR GO:0000166,GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010675,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030312,GO:0030551,GO:0030552,GO:0030554,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043565,GO:0044212,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0062012,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2000874,GO:2001141 - ko:K10914 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 - - - ko00000,ko00001,ko03000 - - - HTH_Crp_2,cNMP_binding WXD2_k127_1398908_7 869210.Marky_1840 3.913e-34 149.0 294HY@1|root,2ZRXK@2|Bacteria,1WK25@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S YwiC-like protein - - - - - - - - - - - - YwiC WXD2_k127_1398908_1 378806.STAUR_3955 7.653e-119 407.0 COG0265@1|root,COG0823@1|root,COG2234@1|root,COG0265@2|Bacteria,COG0823@2|Bacteria,COG2234@2|Bacteria,1MV86@1224|Proteobacteria,42Z17@68525|delta/epsilon subdivisions,2WURE@28221|Deltaproteobacteria,2YUPJ@29|Myxococcales 28221|Deltaproteobacteria O Peptidase family M28 - - - - - - - - - - - - PA,PD40,PDZ_2,Peptidase_M28 WXD2_k127_1398908_3 314230.DSM3645_03568 1.328e-74 276.0 COG0265@1|root,COG2234@1|root,COG0265@2|Bacteria,COG2234@2|Bacteria,2IX8E@203682|Planctomycetes 203682|Planctomycetes O PA domain - - - - - - - - - - - - PA,PDZ_2,Peptidase_M28 WXD2_k127_143566_1 460265.Mnod_0355 7.769e-76 267.0 COG4301@1|root,COG4301@2|Bacteria,1MUCG@1224|Proteobacteria,2TRMH@28211|Alphaproteobacteria,1JSNI@119045|Methylobacteriaceae 28211|Alphaproteobacteria S Histidine-specific methyltransferase, SAM-dependent MA20_09135 - - - - - - - - - - - Methyltransf_33 WXD2_k127_143566_0 1183438.GKIL_3263 2.327e-92 326.0 COG1470@1|root,COG3391@1|root,COG1470@2|Bacteria,COG3391@2|Bacteria,1G0EB@1117|Cyanobacteria 1117|Cyanobacteria DZ PFAM Na-Ca exchanger integrin-beta4 peptidase-like FG-GAP - - - ko:K20276 ko02024,map02024 - - - ko00000,ko00001 - - - Calx-beta,DUF4347,He_PIG,HemolysinCabind,PPC,VCBS WXD2_k127_1473357_4 1379270.AUXF01000002_gene1621 2.726e-11 66.0 2EWAK@1|root,33PPB@2|Bacteria,1ZT00@142182|Gemmatimonadetes 142182|Gemmatimonadetes - - - - - - - - - - - - - - - WXD2_k127_1473357_1 234267.Acid_0830 7.352e-254 799.0 COG2936@1|root,COG2936@2|Bacteria,3Y2WR@57723|Acidobacteria 57723|Acidobacteria S X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - ko:K06978 - - - - ko00000 - - - PepX_C,Peptidase_S15 WXD2_k127_1473357_2 388413.ALPR1_06310 4.571e-83 288.0 COG2010@1|root,COG2010@2|Bacteria,4NMGT@976|Bacteroidetes,47UKI@768503|Cytophagia 976|Bacteroidetes C Cytochrome c - - - - - - - - - - - - Cytochrom_C WXD2_k127_1473357_0 1123508.JH636439_gene1340 9.791e-289 901.0 COG1505@1|root,COG1505@2|Bacteria,2IXRJ@203682|Planctomycetes 203682|Planctomycetes E Prolyl oligopeptidase - - 3.4.21.26 ko:K01322 ko04614,map04614 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S9,Peptidase_S9_N WXD2_k127_1473357_3 1379270.AUXF01000002_gene1739 1.279e-32 132.0 COG0454@1|root,COG0456@2|Bacteria,1ZTIN@142182|Gemmatimonadetes 142182|Gemmatimonadetes K acetyltransferase - - - - - - - - - - - - - WXD2_k127_1485381_3 861299.J421_6202 6.443e-62 224.0 COG1064@1|root,COG1064@2|Bacteria,1ZSXS@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Zinc-binding dehydrogenase - - 1.1.1.1 ko:K13953 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 - R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310 RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273 ko00000,ko00001,ko01000 - - - ADH_N,ADH_zinc_N WXD2_k127_1485381_0 383372.Rcas_3594 2.256e-198 634.0 COG0028@1|root,COG0028@2|Bacteria,2G7NZ@200795|Chloroflexi 200795|Chloroflexi EH Belongs to the TPP enzyme family - - 2.2.1.6 ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N WXD2_k127_1485381_1 1121875.KB907556_gene591 1.964e-153 500.0 COG1473@1|root,COG1473@2|Bacteria,4NEKH@976|Bacteroidetes,1HZT3@117743|Flavobacteriia 976|Bacteroidetes S PFAM Peptidase M20 - - - ko:K12941 - - - - ko00000,ko01002 - - - M20_dimer,Peptidase_M20 WXD2_k127_1485381_5 234267.Acid_4496 2.178e-27 123.0 COG2318@1|root,COG2318@2|Bacteria,3Y8UQ@57723|Acidobacteria 57723|Acidobacteria S DinB family - - - - - - - - - - - - DinB WXD2_k127_1485381_2 743721.Psesu_2705 3.043e-76 265.0 COG3861@1|root,COG3861@2|Bacteria,1MWBU@1224|Proteobacteria,1S1WP@1236|Gammaproteobacteria,1XCQG@135614|Xanthomonadales 135614|Xanthomonadales S electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - - - - - - - - - - Gly-zipper_Omp WXD2_k127_1485381_4 234267.Acid_5304 1.402e-55 202.0 COG0526@1|root,COG0526@2|Bacteria 2|Bacteria CO cell redox homeostasis - - - - - - - - - - - - AhpC-TSA,DsbD WXD2_k127_1493060_0 717231.Flexsi_1148 4.746e-47 186.0 COG0568@1|root,COG0568@2|Bacteria,2GEUB@200930|Deferribacteres 200930|Deferribacteres K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released - - - ko:K03086 - - - - ko00000,ko03021 - - - Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4 WXD2_k127_1493060_5 1267535.KB906767_gene3333 2.715e-13 77.0 2EGKM@1|root,33ACV@2|Bacteria,3Y5U1@57723|Acidobacteria,2JK61@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - WXD2_k127_1493060_2 1267535.KB906767_gene3332 6.061e-35 142.0 2DKN8@1|root,32UFB@2|Bacteria,3Y55I@57723|Acidobacteria,2JJU7@204432|Acidobacteriia 204432|Acidobacteriia S Domain of unknown function (DUF4252) - - - - - - - - - - - - DUF4252 WXD2_k127_1493060_6 1267535.KB906767_gene3331 0.0001034 53.0 2ERSC@1|root,33JBJ@2|Bacteria,3Y5XV@57723|Acidobacteria,2JK5S@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - WXD2_k127_1493060_1 234267.Acid_3520 4.978e-40 156.0 COG1595@1|root,COG1595@2|Bacteria,3Y5BF@57723|Acidobacteria 57723|Acidobacteria K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 WXD2_k127_1493060_4 1356852.N008_20540 2.03e-17 88.0 2DTU1@1|root,33MMF@2|Bacteria,4NWD8@976|Bacteroidetes,47SX0@768503|Cytophagia 976|Bacteroidetes - - - - - - - - - - - - - - - WXD2_k127_1493060_3 1144275.COCOR_01492 4.662e-25 117.0 COG3291@1|root,COG3391@1|root,COG3291@2|Bacteria,COG3391@2|Bacteria,1R5MU@1224|Proteobacteria,42UIQ@68525|delta/epsilon subdivisions,2WQAN@28221|Deltaproteobacteria 28221|Deltaproteobacteria M Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - - - - - - - - - - - WXD2_k127_1515751_5 1379270.AUXF01000007_gene887 5.384e-09 58.0 COG0451@1|root,COG0451@2|Bacteria,1ZUNR@142182|Gemmatimonadetes 142182|Gemmatimonadetes GM ADP-glyceromanno-heptose 6-epimerase activity - - 1.3.1.45 ko:K05281 ko00943,ko01110,map00943,map01110 - R06562,R06563,R07747,R07751 RC00805 ko00000,ko00001,ko01000 - - - - WXD2_k127_1515751_0 1384056.N787_13620 1.08e-180 575.0 COG0024@1|root,COG0024@2|Bacteria,1QXY6@1224|Proteobacteria,1T3K3@1236|Gammaproteobacteria 1236|Gammaproteobacteria J xaa-pro aminopeptidase - - - - - - - - - - - - Peptidase_M24 WXD2_k127_1515751_1 1380394.JADL01000001_gene3101 3.145e-84 293.0 COG0477@1|root,COG2814@2|Bacteria,1MVSH@1224|Proteobacteria,2TUEW@28211|Alphaproteobacteria,2JV5D@204441|Rhodospirillales 204441|Rhodospirillales EGP Sugar (and other) transporter - - - ko:K08151 - M00668 - - ko00000,ko00002,ko01504,ko02000 2.A.1.2.38,2.A.1.2.39,2.A.1.2.4,2.A.1.2.41,2.A.1.2.68,2.A.1.2.75 - - MFS_1 WXD2_k127_1515751_2 1121033.AUCF01000019_gene3730 6.226e-45 168.0 COG0242@1|root,COG0242@2|Bacteria,1R9XK@1224|Proteobacteria,2U7NP@28211|Alphaproteobacteria,2JS9M@204441|Rhodospirillales 204441|Rhodospirillales J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions - - 3.5.1.88 ko:K01462 - - - - ko00000,ko01000 - - - Pep_deformylase WXD2_k127_1515751_4 1121124.JNIX01000013_gene1550 2.349e-24 115.0 2E902@1|root,3339H@2|Bacteria,1N9U6@1224|Proteobacteria,2UFG4@28211|Alphaproteobacteria,2KH8D@204458|Caulobacterales 204458|Caulobacterales - - - - - - - - - - - - - - - WXD2_k127_1515751_3 497965.Cyan7822_3673 3.846e-29 121.0 COG1104@1|root,COG1104@2|Bacteria,1G0D5@1117|Cyanobacteria,3KG9T@43988|Cyanothece 1117|Cyanobacteria H Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine nifS - 2.8.1.7 ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 - R07460,R11528,R11529 RC01789,RC02313 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 - - - Aminotran_5 WXD2_k127_1528263_0 1121035.AUCH01000003_gene1361 1.2e-74 256.0 COG0590@1|root,COG0590@2|Bacteria,1RE8P@1224|Proteobacteria,2W22Q@28216|Betaproteobacteria,2KYNF@206389|Rhodocyclales 206389|Rhodocyclales FJ MafB19-like deaminase - - - - - - - - - - - - dCMP_cyt_deam_1 WXD2_k127_1528263_2 1385513.N780_01795 3e-53 198.0 COG0739@1|root,COG0739@2|Bacteria,1UXDV@1239|Firmicutes,4ICUP@91061|Bacilli,2YBS6@289201|Pontibacillus 91061|Bacilli M Peptidase family M23 - - - - - - - - - - - - Peptidase_M23 WXD2_k127_1528263_1 292459.STH2612 1.807e-65 244.0 COG0642@1|root,COG2205@2|Bacteria,1TRAB@1239|Firmicutes,24DV3@186801|Clostridia 186801|Clostridia T Psort location CytoplasmicMembrane, score - - - - - - - - - - - - DUF4173 WXD2_k127_1528263_3 1366050.N234_22815 0.0003244 48.0 COG4568@1|root,COG4568@2|Bacteria,1NKDC@1224|Proteobacteria,2W48P@28216|Betaproteobacteria,1KEK0@119060|Burkholderiaceae 28216|Betaproteobacteria K rho-dependent transcription termination - - - ko:K19000 - - - - ko00000,ko03021 - - - - WXD2_k127_1533315_1 1121920.AUAU01000002_gene2134 1.641e-100 340.0 COG0482@1|root,COG0482@2|Bacteria,3Y2JX@57723|Acidobacteria 57723|Acidobacteria J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 mnmA - 2.8.1.13 ko:K00566 ko04122,map04122 - R08700 RC02313,RC02315 ko00000,ko00001,ko01000,ko03016 - - - tRNA_Me_trans WXD2_k127_1533315_2 926567.TheveDRAFT_0088 1.199e-18 93.0 COG0745@1|root,COG0745@2|Bacteria,3TAJR@508458|Synergistetes 508458|Synergistetes K PFAM response regulator receiver - - - ko:K07657,ko:K07658 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C WXD2_k127_1533315_0 234267.Acid_4539 1.181e-293 919.0 COG0280@1|root,COG0281@1|root,COG0280@2|Bacteria,COG0281@2|Bacteria,3Y6VT@57723|Acidobacteria 57723|Acidobacteria C Malic enzyme, NAD binding domain - - 1.1.1.40 ko:K00029 ko00620,ko00710,ko01100,ko01120,ko01200,map00620,map00710,map01100,map01120,map01200 M00169,M00172 R00216 RC00105 ko00000,ko00001,ko00002,ko01000 - - - Malic_M,PTA_PTB,malic WXD2_k127_1535009_1 518766.Rmar_1858 1.085e-76 259.0 COG0451@1|root,COG0451@2|Bacteria,4NEZX@976|Bacteroidetes,1FIS7@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes M GDP-mannose 4,6 dehydratase - - 4.2.1.46 ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 M00793 R06513 RC00402 ko00000,ko00001,ko00002,ko01000 - - - GDP_Man_Dehyd WXD2_k127_1535009_0 1528106.JRJE01000004_gene601 1.377e-155 504.0 COG1004@1|root,COG1004@2|Bacteria,1MW5U@1224|Proteobacteria,2TREV@28211|Alphaproteobacteria,2JPVB@204441|Rhodospirillales 204441|Rhodospirillales M Belongs to the UDP-glucose GDP-mannose dehydrogenase family rkpK - 1.1.1.22 ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 M00014,M00129,M00361,M00362 R00286 RC00291 ko00000,ko00001,ko00002,ko01000 - - - UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N WXD2_k127_1535009_4 240015.ACP_2954 2.084e-29 132.0 COG1463@1|root,COG1463@2|Bacteria,3Y3SX@57723|Acidobacteria,2JIP6@204432|Acidobacteriia 204432|Acidobacteriia Q MlaD protein - - - ko:K02067 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - MlaD WXD2_k127_1535009_2 518766.Rmar_2343 6.449e-72 263.0 COG1127@1|root,COG1127@2|Bacteria,4NETG@976|Bacteroidetes,1FIW0@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes Q ABC transporter - - - ko:K02065 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - ABC_tran WXD2_k127_1535009_3 671143.DAMO_2629 6.039e-69 243.0 COG0767@1|root,COG0767@2|Bacteria,2NPFZ@2323|unclassified Bacteria 2|Bacteria Q ABC-type transport system involved in resistance to organic solvents permease component - - - ko:K02066 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - MlaE WXD2_k127_1540227_5 118166.JH976537_gene3008 1.122e-07 54.0 COG0475@1|root,COG0475@2|Bacteria,1G03Z@1117|Cyanobacteria,1H8CI@1150|Oscillatoriales 1117|Cyanobacteria P PFAM Sodium hydrogen exchanger family - - - - - - - - - - - - Na_H_Exchanger WXD2_k127_1540227_1 85643.Tmz1t_2831 5.001e-88 322.0 COG0642@1|root,COG0784@1|root,COG2198@1|root,COG2202@1|root,COG3829@1|root,COG0642@2|Bacteria,COG0784@2|Bacteria,COG2198@2|Bacteria,COG2202@2|Bacteria,COG3829@2|Bacteria,1NC9X@1224|Proteobacteria,2WGIN@28216|Betaproteobacteria,2KZWQ@206389|Rhodocyclales 206389|Rhodocyclales T His Kinase A (phosphoacceptor) domain - - 2.7.13.3 ko:K11527 - - - - ko00000,ko01000,ko01001,ko02022 - - - CBS,GAF_2,HATPase_c,HisKA,Hpt,PAS_3,Response_reg WXD2_k127_1540227_3 357804.Ping_1199 2.746e-56 226.0 COG2202@1|root,COG3275@1|root,COG5001@1|root,COG2202@2|Bacteria,COG3275@2|Bacteria,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,1RM8A@1236|Gammaproteobacteria 1236|Gammaproteobacteria T Diguanylate cyclase - - - - - - - - - - - - 5TM-5TMR_LYT,EAL,GGDEF,PAS,PAS_3,PAS_9,dCache_1 WXD2_k127_1540227_0 903818.KI912268_gene1592 5.079e-118 421.0 COG4191@1|root,COG4191@2|Bacteria,3Y63K@57723|Acidobacteria 57723|Acidobacteria T ATP-binding region, ATPase domain protein domain protein - - - - - - - - - - - - GAF_2,HATPase_c,HisKA,PAS_3,PAS_9,Response_reg WXD2_k127_1540227_2 1148.1652394 2.208e-64 226.0 COG1028@1|root,COG1028@2|Bacteria,1GEZW@1117|Cyanobacteria 1117|Cyanobacteria IQ Enoyl-(Acyl carrier protein) reductase - - - - - - - - - - - - adh_short_C2 WXD2_k127_1540227_4 1121013.P873_01495 2.628e-14 76.0 2EPV2@1|root,33HFI@2|Bacteria,1P4JW@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - WXD2_k127_1549225_1 1201288.M900_0271 4.102e-45 166.0 COG1290@1|root,COG1290@2|Bacteria,1MV97@1224|Proteobacteria,42MD6@68525|delta/epsilon subdivisions,2WMNX@28221|Deltaproteobacteria 28221|Deltaproteobacteria C PFAM Cytochrome b b6 domain pcmC - - - - - - - - - - - Cytochrom_B_C,Cytochrome_B WXD2_k127_1549225_0 862908.BMS_0207 1.679e-58 210.0 COG0723@1|root,COG0723@2|Bacteria,1NINP@1224|Proteobacteria,42VKD@68525|delta/epsilon subdivisions,2WRHY@28221|Deltaproteobacteria 28221|Deltaproteobacteria C PFAM Rieske 2Fe-2S domain pcmE - 1.10.9.1 ko:K02636,ko:K03886 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00151,M00162 R03817,R08409 RC01002 ko00000,ko00001,ko00002,ko00194,ko01000 - - - Rieske WXD2_k127_1549225_3 357808.RoseRS_3392 2.731e-15 86.0 COG1413@1|root,COG1413@2|Bacteria,2G6UU@200795|Chloroflexi 200795|Chloroflexi C PBS lyase HEAT domain protein repeat-containing protein - - - - - - - - - - - - HEAT_2,HEAT_PBS WXD2_k127_1549225_2 556261.HMPREF0240_04446 4.391e-18 90.0 COG4231@1|root,COG4231@2|Bacteria,1VIY6@1239|Firmicutes,24PDQ@186801|Clostridia 186801|Clostridia C 4Fe-4S binding domain - - - - - - - - - - - - Fer4 WXD2_k127_1553284_0 215803.DB30_7046 4.723e-122 418.0 COG4953@1|root,COG4953@2|Bacteria,1MUA9@1224|Proteobacteria,42MSV@68525|delta/epsilon subdivisions,2WJ6U@28221|Deltaproteobacteria,2YUNP@29|Myxococcales 28221|Deltaproteobacteria M Transglycosylase - - 2.4.1.129 ko:K05367 ko00550,map00550 - - - ko00000,ko00001,ko01000,ko01003,ko01011 - GT51 - BiPBP_C,Transgly,Transpeptidase WXD2_k127_1553284_1 1121943.KB899992_gene2159 2.548e-74 262.0 COG1273@1|root,COG1273@2|Bacteria,1N4UX@1224|Proteobacteria,1RNJ7@1236|Gammaproteobacteria 1236|Gammaproteobacteria L With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD ku - - ko:K10979 ko03450,map03450 - - - ko00000,ko00001,ko03400 - - - Ku WXD2_k127_1553284_2 1121943.KB899992_gene2160 9.959e-71 250.0 COG1273@1|root,COG1273@2|Bacteria,1N4UX@1224|Proteobacteria,1RNJ7@1236|Gammaproteobacteria 1236|Gammaproteobacteria L With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD - - - ko:K10979 ko03450,map03450 - - - ko00000,ko00001,ko03400 - - - Ku,Rho_N WXD2_k127_1568353_9 1033737.CAEV01000110_gene1159 1.399e-38 160.0 COG1670@1|root,COG1670@2|Bacteria,1V1G8@1239|Firmicutes,24G73@186801|Clostridia,36I5H@31979|Clostridiaceae 186801|Clostridia J Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_3 WXD2_k127_1568353_4 1232410.KI421428_gene1046 4.423e-78 286.0 COG0796@1|root,COG0796@2|Bacteria,1NAI2@1224|Proteobacteria,42P58@68525|delta/epsilon subdivisions,2WKYK@28221|Deltaproteobacteria,43TAQ@69541|Desulfuromonadales 28221|Deltaproteobacteria M Provides the (R)-glutamate required for cell wall biosynthesis murI - 5.1.1.3 ko:K01776 ko00471,ko01100,map00471,map01100 - R00260 RC00302 ko00000,ko00001,ko01000,ko01011 - - iAF987.Gmet_0547 Asp_Glu_race WXD2_k127_1568353_0 1047013.AQSP01000123_gene1542 5.208e-158 512.0 COG2204@1|root,COG2204@2|Bacteria,2NP3X@2323|unclassified Bacteria 2|Bacteria T COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains ntrX - - ko:K13599 ko02020,map02020 M00498 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat WXD2_k127_1568353_1 867845.KI911784_gene2515 7.132e-110 375.0 COG0260@1|root,COG0260@2|Bacteria,2G617@200795|Chloroflexi,37528@32061|Chloroflexia 32061|Chloroflexia E Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides pepA - 3.4.11.1 ko:K01255 ko00480,ko01100,map00480,map01100 - R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 - - - Peptidase_M17,Peptidase_M17_N WXD2_k127_1568353_7 1219084.AP014508_gene424 8.329e-48 176.0 COG0315@1|root,COG0315@2|Bacteria,2GD56@200918|Thermotogae 200918|Thermotogae H Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) moaC - 4.6.1.17 ko:K03637 ko00790,ko01100,ko04122,map00790,map01100,map04122 - R11372 RC03425 ko00000,ko00001,ko01000 - - - MoaC WXD2_k127_1568353_11 1410609.JHVB01000012_gene98 3.13e-20 102.0 COG0746@1|root,COG1763@1|root,COG0746@2|Bacteria,COG1763@2|Bacteria,2J99J@203691|Spirochaetes 203691|Spirochaetes H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor - - - - - - - - - - - - MobB,NTP_transf_3 WXD2_k127_1568353_8 402777.KB235898_gene5647 2.659e-47 178.0 COG1215@1|root,COG1215@2|Bacteria,1GDJY@1117|Cyanobacteria,1H8JX@1150|Oscillatoriales 1117|Cyanobacteria M PFAM Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 WXD2_k127_1568353_5 592015.HMPREF1705_00489 6.253e-62 226.0 COG1943@1|root,COG1943@2|Bacteria,3TC5I@508458|Synergistetes 508458|Synergistetes L Transposase IS200 like - - - - - - - - - - - - Y1_Tnp WXD2_k127_1568353_6 1502852.FG94_03106 5.908e-55 199.0 COG1764@1|root,COG1764@2|Bacteria,1RH9U@1224|Proteobacteria,2VTKP@28216|Betaproteobacteria,474QB@75682|Oxalobacteraceae 28216|Betaproteobacteria O OsmC-like protein osmC - - ko:K04063 - - - - ko00000 - - - OsmC WXD2_k127_1568353_12 269799.Gmet_0728 8.224e-14 77.0 COG0457@1|root,COG0457@2|Bacteria,1P22J@1224|Proteobacteria,4310H@68525|delta/epsilon subdivisions,2WWBW@28221|Deltaproteobacteria,43VHQ@69541|Desulfuromonadales 28221|Deltaproteobacteria S Tetratricopeptide repeat - - - - - - - - - - - - - WXD2_k127_1568353_14 243231.GSU3263 1.78e-05 56.0 COG0745@1|root,COG0745@2|Bacteria,1RI9T@1224|Proteobacteria,4321Z@68525|delta/epsilon subdivisions,2WWZ3@28221|Deltaproteobacteria 28221|Deltaproteobacteria T response regulator - - - - - - - - - - - - PilZ,Response_reg WXD2_k127_1568353_2 886293.Sinac_3572 3.66e-98 351.0 COG1104@1|root,COG1104@2|Bacteria,2IXJC@203682|Planctomycetes 203682|Planctomycetes E COG1104 Cysteine sulfinate desulfinase cysteine desulfurase - - 2.8.1.7 ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 - R07460,R11528,R11529 RC01789,RC02313 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 - - - Aminotran_5 WXD2_k127_1568353_3 1232410.KI421426_gene1424 1.058e-83 296.0 COG0617@1|root,COG0617@2|Bacteria,1MVCS@1224|Proteobacteria,42QKZ@68525|delta/epsilon subdivisions,2WJ74@28221|Deltaproteobacteria,43RXY@69541|Desulfuromonadales 28221|Deltaproteobacteria J Probable RNA and SrmB- binding site of polymerase A pcnB - 2.7.7.19,2.7.7.72 ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 - R09382,R09383,R09384,R09386 RC00078 ko00000,ko00001,ko01000,ko03016,ko03019 - - - PolyA_pol,PolyA_pol_RNAbd,PolyA_pol_arg_C WXD2_k127_1568353_10 1121440.AUMA01000002_gene2163 8.948e-37 145.0 COG0681@1|root,COG0681@2|Bacteria,1MXUF@1224|Proteobacteria,42NJE@68525|delta/epsilon subdivisions,2WKMA@28221|Deltaproteobacteria,2M9N8@213115|Desulfovibrionales 28221|Deltaproteobacteria U Belongs to the peptidase S26 family lepB - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24,Peptidase_S26 WXD2_k127_157025_2 391625.PPSIR1_25986 1.021e-39 160.0 COG1866@1|root,COG1866@2|Bacteria 2|Bacteria H phosphoenolpyruvate carboxykinase (ATP) activity pckA GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005488,GO:0005509,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0017076,GO:0019318,GO:0019319,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046872,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901576 4.1.1.49 ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 M00003,M00170 R00341 RC00002,RC02741 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_3169,iSB619.SA_RS09060,iSF_1195.SF3422,iUTI89_1310.UTI89_C3903,iYO844.BSU30560 PEPCK_ATP WXD2_k127_157025_1 926549.KI421517_gene3452 8.52e-84 290.0 COG4850@1|root,COG4850@2|Bacteria,4NFZ6@976|Bacteroidetes,47K82@768503|Cytophagia 976|Bacteroidetes S Uncharacterized conserved protein (DUF2183) - - - - - - - - - - - - DUF2183 WXD2_k127_157025_5 760192.Halhy_4503 4.75e-16 90.0 COG2318@1|root,COG2318@2|Bacteria,4NQEI@976|Bacteroidetes 976|Bacteroidetes S Protein of unknown function (DUF1572) - - - - - - - - - - - - DUF1572 WXD2_k127_157025_0 357808.RoseRS_0328 1.465e-97 328.0 COG1893@1|root,COG1893@2|Bacteria,2G9PB@200795|Chloroflexi,3772C@32061|Chloroflexia 32061|Chloroflexia H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - 1.1.1.169 ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R02472 RC00726 ko00000,ko00001,ko00002,ko01000 - - - ApbA,ApbA_C WXD2_k127_157025_4 194439.CT0599 2.466e-26 120.0 2E3B5@1|root,32YAP@2|Bacteria,1FE8N@1090|Chlorobi 1090|Chlorobi S Protein of unknown function (DUF2721) - - - - - - - - - - - - DUF2721 WXD2_k127_157025_3 338963.Pcar_1943 2.358e-36 152.0 COG0517@1|root,COG0794@1|root,COG0517@2|Bacteria,COG0794@2|Bacteria,1MUXD@1224|Proteobacteria,42M0M@68525|delta/epsilon subdivisions,2WJ4Y@28221|Deltaproteobacteria,43S6C@69541|Desulfuromonadales 28221|Deltaproteobacteria M SIS domain kdsD - 5.3.1.13 ko:K06041 ko00540,ko01100,map00540,map01100 M00063 R01530 RC00541 ko00000,ko00001,ko00002,ko01000,ko01005 - - iAF987.Gmet_1278 CBS,SIS WXD2_k127_1571643_3 1121396.KB893012_gene4023 4.607e-12 72.0 28I8B@1|root,2Z8B5@2|Bacteria,1MUNM@1224|Proteobacteria,42NZH@68525|delta/epsilon subdivisions,2WKHB@28221|Deltaproteobacteria,2MISZ@213118|Desulfobacterales 28221|Deltaproteobacteria C PFAM Cytochrome c, bacterial - - - - - - - - - - - - Cytochrom_CIII,Cytochrome_C554,Cytochrome_cB WXD2_k127_1571643_0 671143.DAMO_3032 1.195e-96 324.0 COG0861@1|root,COG0861@2|Bacteria,2NQFQ@2323|unclassified Bacteria 2|Bacteria P Integral membrane protein TerC family terC - - - - - - - - - - - TerC WXD2_k127_1571643_1 1038858.AXBA01000025_gene4997 1.114e-59 234.0 COG0784@1|root,COG4191@1|root,COG0784@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2TQQ9@28211|Alphaproteobacteria,3EY6H@335928|Xanthobacteraceae 28211|Alphaproteobacteria T histidine kinase A domain protein cckA - 2.7.13.3 ko:K13587 ko02020,ko04112,map02020,map04112 M00512 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HATPase_c,HisKA,PAS,PAS_4,PAS_8,PAS_9,Response_reg WXD2_k127_1571643_2 1000565.METUNv1_01473 1.682e-21 96.0 COG2199@1|root,COG3706@2|Bacteria,1R7HC@1224|Proteobacteria,2VHJS@28216|Betaproteobacteria,2KZR8@206389|Rhodocyclales 206389|Rhodocyclales T Membrane-associated sensor, integral membrane domain - - - - - - - - - - - - GGDEF,MASE4 WXD2_k127_1572204_1 91464.S7335_3669 6.046e-127 426.0 COG1231@1|root,COG1231@2|Bacteria,1FZVN@1117|Cyanobacteria,1H47E@1129|Synechococcus 1117|Cyanobacteria E Flavin containing amine oxidoreductase - - 1.4.3.4 ko:K00274 ko00260,ko00330,ko00340,ko00350,ko00360,ko00380,ko00950,ko00982,ko01100,ko01110,ko04726,ko04728,ko05030,ko05031,ko05034,map00260,map00330,map00340,map00350,map00360,map00380,map00950,map00982,map01100,map01110,map04726,map04728,map05030,map05031,map05034 M00135 R02173,R02382,R02529,R02532,R02613,R02908,R02919,R04025,R04300,R04674,R04890,R04893,R04894,R04907,R04908,R08346,R08347,R08348,R11354 RC00062,RC00160,RC00225,RC00676,RC00807,RC00808,RC01808,RC02226,RC02713 ko00000,ko00001,ko00002,ko01000 - - - Amino_oxidase WXD2_k127_1572204_0 1123073.KB899241_gene3395 1.524e-249 777.0 COG0624@1|root,COG0624@2|Bacteria,1R96A@1224|Proteobacteria,1RSD6@1236|Gammaproteobacteria,1X5K9@135614|Xanthomonadales 135614|Xanthomonadales E Peptidase dimerisation domain - - - - - - - - - - - - M20_dimer,Peptidase_M20 WXD2_k127_1572204_3 1267535.KB906767_gene237 2.147e-35 144.0 COG2318@1|root,COG2318@2|Bacteria,3Y53M@57723|Acidobacteria 57723|Acidobacteria S Mycothiol maleylpyruvate isomerase N-terminal domain - - - - - - - - - - - - DinB_2 WXD2_k127_1572204_4 1270196.JCKI01000010_gene753 0.0002447 49.0 28IGI@1|root,2Z8HZ@2|Bacteria,4P380@976|Bacteroidetes,1IXPT@117747|Sphingobacteriia 976|Bacteroidetes S Suppressor of fused protein (SUFU) - - - - - - - - - - - - SUFU WXD2_k127_1572204_2 1296416.JACB01000036_gene2912 1.472e-45 181.0 COG3391@1|root,COG3391@2|Bacteria,4NSAP@976|Bacteroidetes,1I7PP@117743|Flavobacteriia,2YHS6@290174|Aquimarina 976|Bacteroidetes S amine dehydrogenase activity - - - - - - - - - - - - SGL WXD2_k127_1589338_0 1121468.AUBR01000014_gene2214 1.1e-68 243.0 COG1187@1|root,COG1187@2|Bacteria,1TP68@1239|Firmicutes,248UG@186801|Clostridia,42G4B@68295|Thermoanaerobacterales 186801|Clostridia J Belongs to the pseudouridine synthase RsuA family rluB - 5.4.99.19,5.4.99.22 ko:K06178,ko:K06183 - - - - ko00000,ko01000,ko03009 - - - PseudoU_synth_2,S4 WXD2_k127_1589338_3 1340493.JNIF01000004_gene493 6.287e-41 160.0 COG1386@1|root,COG1386@2|Bacteria,3Y3E0@57723|Acidobacteria 57723|Acidobacteria D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves - - - ko:K06024 - - - - ko00000,ko03036 - - - SMC_ScpB WXD2_k127_1589338_2 1120971.AUCA01000019_gene1107 3.488e-43 176.0 COG1354@1|root,COG1354@2|Bacteria,1TRW3@1239|Firmicutes,4HA6Q@91061|Bacilli,279W3@186823|Alicyclobacillaceae 91061|Bacilli D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves scpA GO:0003674,GO:0005488,GO:0005515,GO:0042802 - ko:K05896 - - - - ko00000,ko03036 - - - SMC_ScpA WXD2_k127_1589338_1 309799.DICTH_1359 2.022e-63 222.0 COG0180@1|root,COG0180@2|Bacteria 2|Bacteria J Tryptophanyl-tRNA synthetase trpS - 6.1.1.2 ko:K01867 ko00970,map00970 M00359,M00360 R03664 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_1b WXD2_k127_1601573_1 1144275.COCOR_06344 4.495e-142 476.0 COG0587@1|root,COG0587@2|Bacteria,1MUIF@1224|Proteobacteria,42MGP@68525|delta/epsilon subdivisions,2WIZ2@28221|Deltaproteobacteria,2YU4G@29|Myxococcales 28221|Deltaproteobacteria L DNA polymerase dnaE - 2.7.7.7 ko:K02337,ko:K14162 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_alpha,HHH_6,PHP,tRNA_anti-codon WXD2_k127_1601573_0 929556.Solca_0050 1.589e-192 649.0 COG1470@1|root,COG3209@1|root,COG4932@1|root,COG1470@2|Bacteria,COG3209@2|Bacteria,COG4932@2|Bacteria,4PKBQ@976|Bacteroidetes,1J0N1@117747|Sphingobacteriia 976|Bacteroidetes M conserved repeat domain protein - - - - - - - - - - - - CHU_C,Calx-beta,DUF11,SprB WXD2_k127_1604247_3 926566.Terro_0577 1.146e-22 110.0 COG2027@1|root,COG2027@2|Bacteria,3Y3WF@57723|Acidobacteria,2JIBN@204432|Acidobacteriia 204432|Acidobacteriia M PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C - - 3.4.16.4 ko:K07259 ko00550,map00550 - - - ko00000,ko00001,ko01000,ko01002,ko01011 - - - Peptidase_S13 WXD2_k127_1604247_0 483219.LILAB_16950 7.089e-186 595.0 COG0304@1|root,COG0304@2|Bacteria 2|Bacteria I 3-oxoacyl-[acyl-carrier-protein] synthase activity fabB - 2.3.1.179,2.3.1.180 ko:K09458,ko:K18473 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00082,M00083,M00572 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119,R10707 RC00004,RC00039,RC02728,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Ketoacyl-synt_C,ketoacyl-synt WXD2_k127_1604247_1 509635.N824_07835 6.191e-42 161.0 2B9NZ@1|root,3231D@2|Bacteria,4NR0T@976|Bacteroidetes,1IUNH@117747|Sphingobacteriia 976|Bacteroidetes S Protein of unknown function (DUF1579) - - - - - - - - - - - - DUF1579 WXD2_k127_1604247_2 234267.Acid_0823 9.24e-25 106.0 COG1278@1|root,COG1278@2|Bacteria,3Y8IF@57723|Acidobacteria 57723|Acidobacteria K Cold shock protein domain - - - ko:K03704 - - - - ko00000,ko03000 - - - CSD WXD2_k127_1614346_1 215803.DB30_3367 1.996e-77 284.0 COG4219@1|root,COG4219@2|Bacteria,1PJ0I@1224|Proteobacteria,4380Y@68525|delta/epsilon subdivisions,2X3AY@28221|Deltaproteobacteria,2YV6Q@29|Myxococcales 28221|Deltaproteobacteria KT BlaR1 peptidase M56 - - - - - - - - - - - - Peptidase_M56 WXD2_k127_1614346_2 378806.STAUR_1205 2.026e-47 176.0 COG3682@1|root,COG3682@2|Bacteria,1RKDI@1224|Proteobacteria,4383A@68525|delta/epsilon subdivisions,2X3DA@28221|Deltaproteobacteria,2YVI8@29|Myxococcales 28221|Deltaproteobacteria K Penicillinase repressor - - - - - - - - - - - - Penicillinase_R WXD2_k127_1614346_4 1122137.AQXF01000004_gene1615 5.215e-30 124.0 COG0558@1|root,COG0558@2|Bacteria,1QX4I@1224|Proteobacteria,2TZ8N@28211|Alphaproteobacteria 28211|Alphaproteobacteria I Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - - - - - - - - - - - WXD2_k127_1614346_3 913865.DOT_4712 7.205e-31 123.0 2E9H4@1|root,333Q5@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_1614346_7 234267.Acid_2134 6.612e-20 103.0 2AC2T@1|root,311KW@2|Bacteria,3Y4QM@57723|Acidobacteria 57723|Acidobacteria - - - - - - - - - - - - - - - WXD2_k127_1614346_0 1122604.JONR01000020_gene467 4.017e-79 273.0 COG0204@1|root,COG0204@2|Bacteria,1MVWG@1224|Proteobacteria,1RR21@1236|Gammaproteobacteria,1X4SX@135614|Xanthomonadales 135614|Xanthomonadales I Acyltransferase - - - - - - - - - - - - Acyltransferase WXD2_k127_1614346_9 32051.SynWH7803_1313 2.388e-08 64.0 COG1547@1|root,COG1547@2|Bacteria,1G7QG@1117|Cyanobacteria,1H1FQ@1129|Synechococcus 1117|Cyanobacteria S Domain of unknown function (DUF309) - - - ko:K09763 - - - - ko00000 - - - DUF309 WXD2_k127_1614346_8 1443125.Z962_10345 1.758e-10 72.0 COG0745@1|root,COG0745@2|Bacteria,1TT2Z@1239|Firmicutes,248PN@186801|Clostridia,36DR9@31979|Clostridiaceae 186801|Clostridia T response regulator, receiver - - - - - - - - - - - - Response_reg,Trans_reg_C WXD2_k127_1614346_6 1156937.MFUM_110010 2.055e-29 119.0 COG1141@1|root,COG1141@2|Bacteria,46T2D@74201|Verrucomicrobia,37GX8@326457|unclassified Verrucomicrobia 74201|Verrucomicrobia C 4Fe-4S single cluster domain of Ferredoxin I - - - ko:K05337 - - - - ko00000 - - - Fer4_13 WXD2_k127_1614346_5 1122929.KB908217_gene206 1.379e-29 129.0 COG2968@1|root,COG2968@2|Bacteria,1RH7T@1224|Proteobacteria,2U981@28211|Alphaproteobacteria 28211|Alphaproteobacteria S Membrane omp28 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - ko:K09807 - - - - ko00000 - - - SIMPL WXD2_k127_1615585_4 234267.Acid_0744 3.596e-08 63.0 COG0236@1|root,COG0236@2|Bacteria,3Y5XA@57723|Acidobacteria 57723|Acidobacteria IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis - - - ko:K02078 - - - - ko00000,ko00001 - - - PP-binding WXD2_k127_1615585_0 479434.Sthe_1211 5.035e-100 340.0 COG0304@1|root,COG0304@2|Bacteria,2G5K7@200795|Chloroflexi,27XNR@189775|Thermomicrobia 189775|Thermomicrobia I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP - - 2.3.1.179 ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119 RC00039,RC02728,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Ketoacyl-synt_C,ketoacyl-synt WXD2_k127_1615585_3 1121920.AUAU01000006_gene355 1.733e-14 78.0 COG1366@1|root,COG1366@2|Bacteria,3Y4U6@57723|Acidobacteria 57723|Acidobacteria T Belongs to the anti-sigma-factor antagonist family - - - ko:K04749 - - - - ko00000,ko03021 - - - STAS WXD2_k127_1615585_1 1120973.AQXL01000132_gene2193 3.708e-69 249.0 COG4448@1|root,COG4448@2|Bacteria,1TRWI@1239|Firmicutes,4HAM1@91061|Bacilli,27A7C@186823|Alicyclobacillaceae 91061|Bacilli E L-asparaginase II - - - - - - - - - - - - Asparaginase_II WXD2_k127_1615585_5 1123242.JH636436_gene178 5.005e-07 59.0 COG0607@1|root,COG0607@2|Bacteria,2IZWR@203682|Planctomycetes 203682|Planctomycetes P Rhodanese Homology Domain - - - - - - - - - - - - Rhodanese WXD2_k127_1615585_2 204669.Acid345_0158 3.896e-19 99.0 COG1651@1|root,COG1651@2|Bacteria,3Y2G9@57723|Acidobacteria,2JIKS@204432|Acidobacteriia 204432|Acidobacteriia O Thioredoxin-like domain - - - - - - - - - - - - Thioredoxin_4 WXD2_k127_1628453_2 1306174.JODP01000012_gene6235 5.854e-17 94.0 COG3468@1|root,COG3468@2|Bacteria,2HCJX@201174|Actinobacteria 201174|Actinobacteria MU ig-like, plexins, transcription factors - - - - - - - - - - - - TIG WXD2_k127_1628453_4 944479.JQLX01000016_gene364 2.351e-05 56.0 COG0457@1|root,COG0457@2|Bacteria,1Q6R4@1224|Proteobacteria,439NS@68525|delta/epsilon subdivisions,2X504@28221|Deltaproteobacteria,2M74N@213113|Desulfurellales 28221|Deltaproteobacteria S Tetratricopeptide repeat - - - - - - - - - - - - TPR_14,TPR_19,TPR_8 WXD2_k127_1628453_5 56780.SYN_01770 0.0003892 52.0 COG0457@1|root,COG0457@2|Bacteria 56780.SYN_01770|- S peptidyl-tyrosine sulfation - - - - - - - - - - - - - WXD2_k127_1628453_3 404589.Anae109_0692 6.201e-13 74.0 COG2018@1|root,COG2018@2|Bacteria,1NG1T@1224|Proteobacteria,42VP4@68525|delta/epsilon subdivisions,2WS9A@28221|Deltaproteobacteria,2YVP4@29|Myxococcales 28221|Deltaproteobacteria S Roadblock/LC7 domain - - - - - - - - - - - - - WXD2_k127_1628453_1 246194.CHY_1999 4.627e-36 142.0 COG0511@1|root,COG5016@1|root,COG0511@2|Bacteria,COG5016@2|Bacteria,1VT8P@1239|Firmicutes,247NZ@186801|Clostridia,42EY5@68295|Thermoanaerobacterales 186801|Clostridia C PFAM Conserved carboxylase region pycB - 4.1.1.3,6.4.1.1 ko:K01571,ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 M00173,M00620 R00217,R00344 RC00040,RC00367 ko00000,ko00001,ko00002,ko01000,ko02000 3.B.1.1.1 - - Biotin_lipoyl,HMGL-like,PYC_OADA WXD2_k127_1628453_0 1430440.MGMSRv2_0538 3.115e-176 564.0 COG0439@1|root,COG0439@2|Bacteria,1MU4H@1224|Proteobacteria,2U25Z@28211|Alphaproteobacteria,2JPBR@204441|Rhodospirillales 204441|Rhodospirillales I Biotin carboxylase accC - 6.3.4.14,6.4.1.2 ko:K01961 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04385 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 - - - Biotin_carb_C,Biotin_carb_N,CPSase_L_D2 WXD2_k127_1646715_1 1121920.AUAU01000022_gene2467 7.483e-43 179.0 COG3266@1|root,COG3266@2|Bacteria,3Y4N4@57723|Acidobacteria 57723|Acidobacteria S FecR protein - - - - - - - - - - - - FecR WXD2_k127_1646715_0 1047013.AQSP01000033_gene1389 5.557e-58 212.0 COG0639@1|root,COG0639@2|Bacteria,2NPHT@2323|unclassified Bacteria 2|Bacteria T Calcineurin-like phosphoesterase superfamily domain - - - - - - - - - - - - Metallophos_2 WXD2_k127_1646715_2 478741.JAFS01000002_gene419 6.38e-27 118.0 COG0703@1|root,COG0703@2|Bacteria,46T2U@74201|Verrucomicrobia,37GWB@326457|unclassified Verrucomicrobia 74201|Verrucomicrobia F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate aroK - 2.7.1.71 ko:K00891 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02412 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - SKI WXD2_k127_1647187_0 378806.STAUR_6060 5.558e-109 363.0 COG0498@1|root,COG0498@2|Bacteria,1MUWQ@1224|Proteobacteria,42M1W@68525|delta/epsilon subdivisions,2WPYW@28221|Deltaproteobacteria,2Z30A@29|Myxococcales 28221|Deltaproteobacteria E Pyridoxal-phosphate dependent enzyme - - 4.2.3.1 ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 M00018 R01466,R05086 RC00017,RC00526 ko00000,ko00001,ko00002,ko01000 - - - PALP WXD2_k127_1647187_1 1239962.C943_01339 3.69e-15 89.0 COG3866@1|root,COG4254@1|root,COG5492@1|root,COG3866@2|Bacteria,COG4254@2|Bacteria,COG5492@2|Bacteria 2|Bacteria N domain, Protein pel3 - - - - - - - - - - - FecR,Pectinesterase WXD2_k127_1657056_1 240015.ACP_3120 4.859e-09 68.0 COG2208@1|root,COG2770@1|root,COG2208@2|Bacteria,COG2770@2|Bacteria,3Y2P9@57723|Acidobacteria,2JIVP@204432|Acidobacteriia 204432|Acidobacteriia KT Stage II sporulation protein E - - 3.1.3.3 ko:K07315 - - - - ko00000,ko01000,ko03021 - - - HAMP,SpoIIE WXD2_k127_1657056_0 1120973.AQXL01000068_gene19 4.535e-58 214.0 COG1024@1|root,COG1024@2|Bacteria,1TQ89@1239|Firmicutes,4HB73@91061|Bacilli,2788T@186823|Alicyclobacillaceae 91061|Bacilli I Enoyl-CoA hydratase/isomerase fadB GO:0003674,GO:0003824,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 4.2.1.17 ko:K01715,ko:K13767 ko00071,ko00362,ko00650,ko01100,ko01120,ko01200,ko01212,map00071,map00362,map00650,map01100,map01120,map01200,map01212 M00087 R03026,R04170,R04738,R04740,R04744,R04746 RC00831,RC01095 ko00000,ko00001,ko00002,ko01000 - - - ECH_1 WXD2_k127_1658111_1 290397.Adeh_3188 3.226e-94 327.0 COG4412@1|root,COG4412@2|Bacteria 2|Bacteria S peptidase activity, acting on L-amino acid peptides - - - ko:K07004,ko:K09955 - - - - ko00000 - - - Big_4,FTP,Laminin_G_3,PA,Peptidase_M36 WXD2_k127_1658111_2 1123054.KB907715_gene55 2.257e-58 222.0 COG1404@1|root,COG1404@2|Bacteria,1MU3S@1224|Proteobacteria,1RNB8@1236|Gammaproteobacteria 1236|Gammaproteobacteria O Belongs to the peptidase S8 family - - - - - - - - - - - - PA,PPC,Peptidase_S8 WXD2_k127_1658111_3 1242864.D187_003367 1.082e-52 190.0 COG1832@1|root,COG1832@2|Bacteria,1N03D@1224|Proteobacteria,42TZA@68525|delta/epsilon subdivisions,2WRHK@28221|Deltaproteobacteria,2Z03M@29|Myxococcales 28221|Deltaproteobacteria S CoA binding domain - - - ko:K06929 - - - - ko00000 - - - CoA_binding_2 WXD2_k127_1658111_4 1382306.JNIM01000001_gene1928 1.128e-42 174.0 COG0596@1|root,COG0596@2|Bacteria,2GA9A@200795|Chloroflexi 200795|Chloroflexi S COGs COG0596 hydrolase or acyltransferase (alpha beta hydrolase superfamily) - - - - - - - - - - - - Abhydrolase_1 WXD2_k127_1658111_5 296591.Bpro_1835 6.895e-08 65.0 COG0596@1|root,COG0596@2|Bacteria,1QU8M@1224|Proteobacteria,2WGJ0@28216|Betaproteobacteria 28216|Betaproteobacteria S Alpha/beta hydrolase family - - - - - - - - - - - - Abhydrolase_1,Abhydrolase_6 WXD2_k127_1658111_0 246197.MXAN_5336 2.116e-272 852.0 COG0493@1|root,COG0543@1|root,COG0493@2|Bacteria,COG0543@2|Bacteria,1Q2ZJ@1224|Proteobacteria,438P5@68525|delta/epsilon subdivisions,2X8TH@28221|Deltaproteobacteria,2YXE6@29|Myxococcales 28221|Deltaproteobacteria CEH Pyridine nucleotide-disulphide oxidoreductase - - - - - - - - - - - - Pyr_redox_2 WXD2_k127_166005_6 1125863.JAFN01000001_gene3521 1.258e-13 79.0 COG5401@1|root,COG5401@2|Bacteria,1NA0G@1224|Proteobacteria,42V1V@68525|delta/epsilon subdivisions,2WRCV@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Sporulation and spore germination - - - - - - - - - - - - Germane WXD2_k127_166005_4 671143.DAMO_1836 4.54e-54 209.0 COG0860@1|root,COG0860@2|Bacteria,2NPCZ@2323|unclassified Bacteria 2|Bacteria M Ami_3 amiA - 3.5.1.28 ko:K01448 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 - - - AMIN,Amidase_3 WXD2_k127_166005_2 1183438.GKIL_2545 1.722e-67 245.0 COG5637@1|root,COG5637@2|Bacteria,1G2FS@1117|Cyanobacteria 1117|Cyanobacteria S Cyclase dehydrase - - - - - - - - - - - - Polyketide_cyc WXD2_k127_166005_0 690850.Desaf_1515 4.931e-188 605.0 COG1063@1|root,COG1063@2|Bacteria,1MW6Y@1224|Proteobacteria,43AQP@68525|delta/epsilon subdivisions,2X64P@28221|Deltaproteobacteria,2MGWY@213115|Desulfovibrionales 28221|Deltaproteobacteria C Zinc-binding dehydrogenase - - - ko:K18369 ko00640,map00640 - R10703 RC00545 ko00000,ko00001,ko01000 - - - ADH_N,ADH_N_assoc,ADH_zinc_N WXD2_k127_166005_1 1519464.HY22_13745 3.104e-119 390.0 COG0618@1|root,COG0618@2|Bacteria,1FEID@1090|Chlorobi 1090|Chlorobi S 3'(2'),5'-bisphosphate nucleotidase activity - - - - - - - - - - - - - WXD2_k127_166005_3 1321778.HMPREF1982_01776 1.995e-56 214.0 COG0697@1|root,COG0697@2|Bacteria,1UZ6C@1239|Firmicutes,24GY3@186801|Clostridia 186801|Clostridia EG EamA-like transporter family - - - - - - - - - - - - EamA WXD2_k127_166005_5 1121448.DGI_1988 6.202e-25 110.0 COG1522@1|root,COG1522@2|Bacteria,1MXVU@1224|Proteobacteria,42S5E@68525|delta/epsilon subdivisions,2WNB1@28221|Deltaproteobacteria,2MA2B@213115|Desulfovibrionales 28221|Deltaproteobacteria K SMART Transcription regulator, AsnC-type - - - ko:K03718,ko:K03719 - - - - ko00000,ko03000,ko03036 - - - AsnC_trans_reg,HTH_24,HTH_AsnC-type WXD2_k127_1673166_1 929556.Solca_0050 2.937e-151 537.0 COG1470@1|root,COG3209@1|root,COG4932@1|root,COG1470@2|Bacteria,COG3209@2|Bacteria,COG4932@2|Bacteria,4PKBQ@976|Bacteroidetes,1J0N1@117747|Sphingobacteriia 976|Bacteroidetes M conserved repeat domain protein - - - - - - - - - - - - CHU_C,Calx-beta,DUF11,SprB WXD2_k127_1673166_3 886293.Sinac_0666 2.71e-05 57.0 COG4733@1|root,COG4733@2|Bacteria 2|Bacteria S cellulase activity pel3B GO:0005575,GO:0005576 4.2.2.2,4.2.2.23 ko:K01728,ko:K18197,ko:K20276 ko00040,ko02024,map00040,map02024 - R02361,R06240 RC00049,RC00705 ko00000,ko00001,ko01000 - PL11 - Beta_helix,CBM_6,DUF1080,Pec_lyase_C,Pectate_lyase,fn3 WXD2_k127_1673166_2 84531.JMTZ01000005_gene2391 6.117e-102 360.0 COG2304@1|root,COG2304@2|Bacteria,1R8EZ@1224|Proteobacteria,1SG9K@1236|Gammaproteobacteria,1XB1U@135614|Xanthomonadales 135614|Xanthomonadales S IgA Peptidase M64 - - - - - - - - - - - - M64_N,Peptidase_M64 WXD2_k127_1673166_4 211586.SO_0130 0.0009634 51.0 COG3291@1|root,COG4412@1|root,COG3291@2|Bacteria,COG4412@2|Bacteria,1P5IH@1224|Proteobacteria,1RPYC@1236|Gammaproteobacteria,2Q8XN@267890|Shewanellaceae 1236|Gammaproteobacteria O peptidase M6 immune inhibitor A - - - ko:K09607 - - - - ko00000,ko01000,ko01002 - - - PKD,Peptidase_M6 WXD2_k127_1673166_0 635013.TherJR_0997 2.639e-178 578.0 COG0395@1|root,COG5001@1|root,COG5002@1|root,COG0395@2|Bacteria,COG5001@2|Bacteria,COG5002@2|Bacteria,1TP8V@1239|Firmicutes,247PX@186801|Clostridia,26021@186807|Peptococcaceae 186801|Clostridia T Diguanylate cyclase - - - - - - - - - - - - EAL,GGDEF,PAS,PAS_8,PAS_9 WXD2_k127_1678621_2 204669.Acid345_1225 1.153e-48 179.0 COG0051@1|root,COG0051@2|Bacteria,3Y4V5@57723|Acidobacteria,2JJAS@204432|Acidobacteriia 204432|Acidobacteriia J Involved in the binding of tRNA to the ribosomes rpsJ - - ko:K02946 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S10 WXD2_k127_1678621_1 1232410.KI421428_gene1228 6.093e-205 642.0 COG0050@1|root,COG0050@2|Bacteria,1MVC0@1224|Proteobacteria,42MWZ@68525|delta/epsilon subdivisions,2WJ2B@28221|Deltaproteobacteria,43U3Z@69541|Desulfuromonadales 28221|Deltaproteobacteria J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis tuf - - ko:K02358 - - - - ko00000,ko03012,ko03029,ko04147 - - - GTP_EFTU,GTP_EFTU_D2,GTP_EFTU_D3 WXD2_k127_1678621_0 637389.Acaty_c0615 7.126e-270 842.0 COG0480@1|root,COG0480@2|Bacteria,1MUCV@1224|Proteobacteria,1RNSZ@1236|Gammaproteobacteria,2NC2E@225057|Acidithiobacillales 225057|Acidithiobacillales J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome fusA - - ko:K02355 - - - - ko00000,ko03012,ko03029 - - - EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2 WXD2_k127_1709941_1 1267535.KB906767_gene4288 3.816e-92 311.0 COG1009@1|root,COG1009@2|Bacteria,3Y2VS@57723|Acidobacteria,2JIG7@204432|Acidobacteriia 204432|Acidobacteriia CP TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain L - - 1.6.5.3 ko:K00341 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Proton_antipo_C,Proton_antipo_M,Proton_antipo_N WXD2_k127_1709941_8 522772.Dacet_0020 6.325e-23 110.0 COG0713@1|root,COG0713@2|Bacteria,2GFR4@200930|Deferribacteres 200930|Deferribacteres C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoK - 1.6.5.3 ko:K00340 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q2 WXD2_k127_1709941_6 316067.Geob_0471 5.251e-24 110.0 COG0839@1|root,COG0839@2|Bacteria,1MWJV@1224|Proteobacteria,42V5H@68525|delta/epsilon subdivisions,2WQF4@28221|Deltaproteobacteria,43USM@69541|Desulfuromonadales 28221|Deltaproteobacteria C NADH-ubiquinone/plastoquinone oxidoreductase chain 6 nuoJ-1 - 1.6.5.3 ko:K00339 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q3 WXD2_k127_1709941_7 696281.Desru_1813 1.233e-23 107.0 COG1143@1|root,COG1143@2|Bacteria,1VBXF@1239|Firmicutes,24MWM@186801|Clostridia,262DX@186807|Peptococcaceae 186801|Clostridia C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoI - 1.6.5.3 ko:K00338,ko:K05580 ko00190,ko01100,map00190,map01100 M00144,M00145 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Fer4,Fer4_7 WXD2_k127_1709941_2 1051632.TPY_0864 9.943e-89 306.0 COG1005@1|root,COG1005@2|Bacteria,1TQNU@1239|Firmicutes,25E6Z@186801|Clostridia,3WDJU@538999|Clostridiales incertae sedis 186801|Clostridia C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone nuoH - 1.6.5.3 ko:K00337 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - NADHdh WXD2_k127_1709941_0 525904.Tter_1541 3.808e-138 449.0 COG0649@1|root,COG0649@2|Bacteria,2NNWG@2323|unclassified Bacteria 2|Bacteria C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoD GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 ko:K00333,ko:K13378 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Complex1_49kDa WXD2_k127_1709941_4 1280950.HJO_03195 2.072e-37 150.0 COG0852@1|root,COG0852@2|Bacteria,1MX4B@1224|Proteobacteria,2TSMT@28211|Alphaproteobacteria,43WDT@69657|Hyphomonadaceae 28211|Alphaproteobacteria C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoC GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 ko:K00332 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Complex1_30kDa WXD2_k127_1709941_3 247490.KSU1_D0328 7.587e-65 240.0 COG0377@1|root,COG0377@2|Bacteria,2IZ30@203682|Planctomycetes 203682|Planctomycetes C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoB - 1.6.5.3 ko:K00331 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q6 WXD2_k127_1709941_5 1121918.ARWE01000001_gene279 4.273e-25 109.0 COG0838@1|root,COG0838@2|Bacteria,1RGUT@1224|Proteobacteria,42UPV@68525|delta/epsilon subdivisions,2WQB6@28221|Deltaproteobacteria,43UXF@69541|Desulfuromonadales 28221|Deltaproteobacteria C NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 nuoA - 1.6.5.3 ko:K00330 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q4 WXD2_k127_1709941_9 1173025.GEI7407_2492 1.496e-21 101.0 COG1565@1|root,COG1565@2|Bacteria,1G16Z@1117|Cyanobacteria,1H7S5@1150|Oscillatoriales 1117|Cyanobacteria S acr, cog1565 - - - - - - - - - - - - Methyltransf_28 WXD2_k127_1720288_2 1123371.ATXH01000021_gene1117 3.093e-196 643.0 COG0258@1|root,COG0749@1|root,COG0258@2|Bacteria,COG0749@2|Bacteria,2GHDG@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity polA - 2.7.7.7 ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 - R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko01000,ko03032,ko03400 - - - 5_3_exonuc,5_3_exonuc_N,DNA_pol_A,DNA_pol_A_exo1 WXD2_k127_1720288_4 234267.Acid_1490 1.127e-151 500.0 COG3276@1|root,COG3276@2|Bacteria,3Y6R2@57723|Acidobacteria 57723|Acidobacteria J Elongation factor SelB, winged helix - - - ko:K03833 - - - - ko00000,ko03012 - - - GTP_EFTU,GTP_EFTU_D2,SelB-wing_2,SelB-wing_3 WXD2_k127_1720288_9 1267535.KB906767_gene1253 1.339e-78 271.0 COG1801@1|root,COG1801@2|Bacteria 2|Bacteria L Protein of unknown function DUF72 - - - - - - - - - - - - DUF72 WXD2_k127_1720288_14 1123250.KB908445_gene11 1.427e-32 130.0 COG1278@1|root,COG1278@2|Bacteria,1VBBH@1239|Firmicutes,4H4QP@909932|Negativicutes 909932|Negativicutes K Probable zinc-ribbon domain - - - - - - - - - - - - zf-trcl WXD2_k127_1720288_7 555079.Toce_0711 3.334e-108 359.0 COG0031@1|root,COG0031@2|Bacteria,1TP30@1239|Firmicutes,2497G@186801|Clostridia,42F5Y@68295|Thermoanaerobacterales 186801|Clostridia E Belongs to the cysteine synthase cystathionine beta- synthase family cysK - 2.5.1.47 ko:K01738 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 M00021 R00897,R03601,R04859 RC00020,RC02814,RC02821 ko00000,ko00001,ko00002,ko01000 - - - PALP WXD2_k127_1720288_3 240015.ACP_1006 6.082e-156 501.0 COG0626@1|root,COG0626@2|Bacteria,3Y2K5@57723|Acidobacteria,2JHVD@204432|Acidobacteriia 204432|Acidobacteriia E Cys/Met metabolism PLP-dependent enzyme - - 4.4.1.1,4.4.1.2,4.4.1.8 ko:K01760,ko:K17217 ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230 M00017,M00609 R00782,R01001,R01283,R01286,R02408,R04941 RC00056,RC00069,RC00348,RC00382,RC00487,RC00488,RC00710,RC01245,RC02303,RC02814 ko00000,ko00001,ko00002,ko01000 - - - Cys_Met_Meta_PP WXD2_k127_1720288_12 1382359.JIAL01000001_gene2791 5.063e-44 169.0 COG0344@1|root,COG0344@2|Bacteria,3Y51D@57723|Acidobacteria,2JJFC@204432|Acidobacteriia 204432|Acidobacteriia I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP plsY - 2.3.1.15 ko:K08591 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R00851,R09380 RC00004,RC00039,RC00041 ko00000,ko00001,ko00002,ko01000,ko01004 - - - G3P_acyltransf WXD2_k127_1720288_8 443143.GM18_0007 1.206e-86 311.0 COG0240@1|root,COG0240@2|Bacteria,1MUU3@1224|Proteobacteria,42NQB@68525|delta/epsilon subdivisions,2WIWW@28221|Deltaproteobacteria,43TUN@69541|Desulfuromonadales 28221|Deltaproteobacteria I NAD-dependent glycerol-3-phosphate dehydrogenase domain protein gpsA - 1.1.1.94 ko:K00057 ko00564,ko01110,map00564,map01110 - R00842,R00844 RC00029 ko00000,ko00001,ko01000 - - - NAD_Gly3P_dh_C,NAD_Gly3P_dh_N WXD2_k127_1720288_16 1195236.CTER_2811 6.154e-16 88.0 COG2804@1|root,COG2804@2|Bacteria,1TPGE@1239|Firmicutes,247KA@186801|Clostridia,3WGDE@541000|Ruminococcaceae 186801|Clostridia NU type II secretion system protein E xcpR - - ko:K02652 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - T2SSE,T2SSE_N WXD2_k127_1720288_13 1211112.ALJC01000031_gene3522 2.669e-37 147.0 COG0586@1|root,COG0586@2|Bacteria,1R5SJ@1224|Proteobacteria,1S99C@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Membrane-associated protein - - - - - - - - - - - - SNARE_assoc WXD2_k127_1720288_11 316067.Geob_1865 1.498e-55 219.0 COG0840@1|root,COG2972@1|root,COG0840@2|Bacteria,COG2972@2|Bacteria,1RG2B@1224|Proteobacteria,42RYX@68525|delta/epsilon subdivisions,2WNHC@28221|Deltaproteobacteria,43SJD@69541|Desulfuromonadales 28221|Deltaproteobacteria NT histidine kinase HAMP region domain protein mcp64H-2 - - - - - - - - - - - HAMP,MCPsignal WXD2_k127_1720288_0 945713.IALB_0341 0.0 1107.0 COG0574@1|root,COG1080@1|root,COG0574@2|Bacteria,COG1080@2|Bacteria 2|Bacteria G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) ppdK - 2.7.9.1 ko:K01006 ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200 M00169,M00171,M00172,M00173 R00206 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000 - - - PEP-utilizers,PEP-utilizers_C,PPDK_N WXD2_k127_1720288_17 555778.Hneap_0127 0.0001141 55.0 COG2885@1|root,COG2885@2|Bacteria,1REH1@1224|Proteobacteria,1S139@1236|Gammaproteobacteria,1WXRM@135613|Chromatiales 135613|Chromatiales M Belongs to the ompA family - - - - - - - - - - - - OmpA WXD2_k127_1720288_6 596329.HMPREF0631_1319 3.891e-123 422.0 COG0751@1|root,COG0751@2|Bacteria,1TNZ7@1239|Firmicutes,248RS@186801|Clostridia,25R5C@186804|Peptostreptococcaceae 186801|Clostridia J Glycyl-tRNA synthetase beta subunit glyS - 6.1.1.14 ko:K01879 ko00970,map00970 M00360 R03654 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - DALR_1,tRNA_synt_2f WXD2_k127_1720288_5 768670.Calni_0744 4.708e-128 415.0 COG0752@1|root,COG0752@2|Bacteria,2GEZ4@200930|Deferribacteres 200930|Deferribacteres J Glycyl-tRNA synthetase alpha subunit glyQ - 6.1.1.14 ko:K01878 ko00970,map00970 M00360 R03654 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_2e WXD2_k127_1720288_15 404589.Anae109_0902 6.001e-21 100.0 COG1959@1|root,COG1959@2|Bacteria,1PC6Q@1224|Proteobacteria,42VG6@68525|delta/epsilon subdivisions 1224|Proteobacteria K transcriptional regulator, Rrf2 family - - - - - - - - - - - - Rrf2 WXD2_k127_1720288_1 215803.DB30_6992 9.26e-259 803.0 COG0719@1|root,COG0719@2|Bacteria,1MVKY@1224|Proteobacteria,42NJ3@68525|delta/epsilon subdivisions,2WM3R@28221|Deltaproteobacteria,2YX6W@29|Myxococcales 28221|Deltaproteobacteria O FeS assembly protein SufB sufB - - ko:K09014 - - - - ko00000 - - - UPF0051 WXD2_k127_1720288_10 472759.Nhal_0689 7.506e-66 227.0 COG0396@1|root,COG0396@2|Bacteria,1MUGK@1224|Proteobacteria,1RPFE@1236|Gammaproteobacteria,1WWC1@135613|Chromatiales 135613|Chromatiales O TIGRFAM FeS assembly ATPase SufC - - - ko:K09013 - - - - ko00000,ko02000 - - - ABC_tran WXD2_k127_1726315_1 519989.ECTPHS_08708 2.408e-106 359.0 COG0452@1|root,COG0452@2|Bacteria,1MVQP@1224|Proteobacteria,1RMKQ@1236|Gammaproteobacteria,1WXCF@135613|Chromatiales 135613|Chromatiales H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine - - 4.1.1.36,6.3.2.5 ko:K13038 ko00770,ko01100,map00770,map01100 M00120 R03269,R04231 RC00064,RC00090,RC00822 ko00000,ko00001,ko00002,ko01000 - - - DFP,Flavoprotein WXD2_k127_1726315_2 1167006.UWK_02129 1.108e-48 182.0 COG0194@1|root,COG0194@2|Bacteria,1MW92@1224|Proteobacteria,42R4H@68525|delta/epsilon subdivisions,2WPYD@28221|Deltaproteobacteria,2MPUI@213118|Desulfobacterales 28221|Deltaproteobacteria F Essential for recycling GMP and indirectly, cGMP gmk - 2.7.4.8 ko:K00942 ko00230,ko01100,map00230,map01100 M00050 R00332,R02090 RC00002 ko00000,ko00001,ko00002,ko01000 - - - Guanylate_kin WXD2_k127_1726315_3 941824.TCEL_01794 5.138e-46 177.0 COG1561@1|root,COG1561@2|Bacteria,1TQHJ@1239|Firmicutes,24824@186801|Clostridia,36ED0@31979|Clostridiaceae 186801|Clostridia S tigr00255 yicC - - - - - - - - - - - DUF1732,YicC_N WXD2_k127_1726315_4 1110502.TMO_2832 2.027e-43 166.0 COG2121@1|root,COG2121@2|Bacteria,1MZID@1224|Proteobacteria,2TSGQ@28211|Alphaproteobacteria,2JS37@204441|Rhodospirillales 204441|Rhodospirillales S protein conserved in bacteria - - - ko:K09778 - - - - ko00000 - - - DUF374 WXD2_k127_1726315_0 880072.Desac_0952 8.479e-115 380.0 COG1132@1|root,COG1132@2|Bacteria,1MUBM@1224|Proteobacteria,42M01@68525|delta/epsilon subdivisions,2WJ7M@28221|Deltaproteobacteria,2MQ69@213462|Syntrophobacterales 28221|Deltaproteobacteria V Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation msbA - - ko:K06147,ko:K11085 ko02010,map02010 - - - ko00000,ko00001,ko01000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 - - ABC_membrane,ABC_tran WXD2_k127_1729283_1 215803.DB30_6922 1.323e-127 413.0 COG1131@1|root,COG1131@2|Bacteria,1MY19@1224|Proteobacteria,42Y59@68525|delta/epsilon subdivisions,2WTYB@28221|Deltaproteobacteria,2YUUN@29|Myxococcales 28221|Deltaproteobacteria V ABC transporter - - - - - - - - - - - - ABC_tran WXD2_k127_1729283_0 483219.LILAB_05395 1.59e-208 686.0 COG0308@1|root,COG0308@2|Bacteria,1PTWJ@1224|Proteobacteria,42YQD@68525|delta/epsilon subdivisions,2WU66@28221|Deltaproteobacteria,2YXEH@29|Myxococcales 28221|Deltaproteobacteria E Peptidase family M1 domain - - - - - - - - - - - - Peptidase_M1 WXD2_k127_1729283_2 483219.LILAB_05395 6.683e-17 83.0 COG0308@1|root,COG0308@2|Bacteria,1PTWJ@1224|Proteobacteria,42YQD@68525|delta/epsilon subdivisions,2WU66@28221|Deltaproteobacteria,2YXEH@29|Myxococcales 28221|Deltaproteobacteria E Peptidase family M1 domain - - - - - - - - - - - - Peptidase_M1 WXD2_k127_1750647_6 1235800.C819_03656 3.103e-18 85.0 COG3119@1|root,COG3119@2|Bacteria,1TQEP@1239|Firmicutes,2482B@186801|Clostridia,27P18@186928|unclassified Lachnospiraceae 186801|Clostridia P Sulfatase - - - - - - - - - - - - DUF4976,Sulfatase WXD2_k127_1750647_5 1211813.CAPH01000013_gene615 6.474e-20 93.0 COG0023@1|root,COG0023@2|Bacteria,4NS6M@976|Bacteroidetes,2FUHD@200643|Bacteroidia,22UIS@171550|Rikenellaceae 976|Bacteroidetes J Translation initiation factor SUI1 - - - ko:K03113 ko03013,map03013 - - - ko00000,ko00001,ko03012 - - - SUI1 WXD2_k127_1750647_2 1121920.AUAU01000013_gene1734 1.022e-100 340.0 COG4123@1|root,COG4123@2|Bacteria 2|Bacteria AJ Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) - - - - - - - - - - - - MTS WXD2_k127_1750647_7 391625.PPSIR1_34672 9.424e-08 62.0 COG5660@1|root,COG5660@2|Bacteria 2|Bacteria S Putative zinc-finger - - - - - - - - - - - - zf-HC2 WXD2_k127_1750647_3 314230.DSM3645_06149 3.472e-60 214.0 COG1595@1|root,COG1595@2|Bacteria,2J0GI@203682|Planctomycetes 203682|Planctomycetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 WXD2_k127_1750647_4 211114.JOEF01000004_gene6732 1.441e-35 147.0 COG5646@1|root,COG5646@2|Bacteria,2IMR2@201174|Actinobacteria,4E5VC@85010|Pseudonocardiales 201174|Actinobacteria S Domain of unknown function (DU1801) - - - - - - - - - - - - DUF1801 WXD2_k127_1750647_1 204669.Acid345_0622 1.009e-184 593.0 COG0612@1|root,COG0612@2|Bacteria,3Y3XF@57723|Acidobacteria,2JHR4@204432|Acidobacteriia 204432|Acidobacteriia S Insulinase (Peptidase family M16) - - - - - - - - - - - - Peptidase_M16,Peptidase_M16_C WXD2_k127_1750647_0 204669.Acid345_0621 6.481e-190 622.0 COG0612@1|root,COG0612@2|Bacteria,3Y322@57723|Acidobacteria,2JP25@204432|Acidobacteriia 204432|Acidobacteriia S Peptidase M16 inactive domain - - - ko:K07263 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M16_C WXD2_k127_1794496_0 1122963.AUHB01000011_gene1315 1.159e-73 259.0 COG1680@1|root,COG1680@2|Bacteria,1PDR2@1224|Proteobacteria,2U487@28211|Alphaproteobacteria 28211|Alphaproteobacteria V beta-lactamase - - - - - - - - - - - - Beta-lactamase WXD2_k127_1794496_1 251221.35211984 4.939e-32 137.0 2EA12@1|root,3346D@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - DUF4440,SnoaL_3 WXD2_k127_1802306_12 886293.Sinac_2930 6.098e-18 99.0 COG1807@1|root,COG1807@2|Bacteria,2J28Z@203682|Planctomycetes 203682|Planctomycetes M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - - - - - - - - - - - WXD2_k127_1802306_3 269799.Gmet_1105 4.937e-112 387.0 COG0475@1|root,COG0490@1|root,COG1226@1|root,COG0475@2|Bacteria,COG0490@2|Bacteria,COG1226@2|Bacteria,1MV34@1224|Proteobacteria,42MEM@68525|delta/epsilon subdivisions,2WK23@28221|Deltaproteobacteria,43T1F@69541|Desulfuromonadales 28221|Deltaproteobacteria P Sodium/hydrogen exchanger family - - - ko:K03455,ko:K11747 - - - - ko00000,ko02000 2.A.37,2.A.37.1.2 - - Na_H_Exchanger,TrkA_C,TrkA_N WXD2_k127_1802306_0 887062.HGR_04393 2.854e-139 466.0 COG2239@1|root,COG2239@2|Bacteria,1MW24@1224|Proteobacteria,2VI29@28216|Betaproteobacteria,4AIFH@80864|Comamonadaceae 28216|Betaproteobacteria P Divalent cation transporter mgtE - - ko:K06213 - - - - ko00000,ko02000 1.A.26.1 - - CBS,MgtE,MgtE_N WXD2_k127_1802306_5 1120999.JONM01000002_gene679 1.981e-49 198.0 COG1540@1|root,COG1540@2|Bacteria,1MUYV@1224|Proteobacteria,2VKKP@28216|Betaproteobacteria,2KQQQ@206351|Neisseriales 206351|Neisseriales S LamB/YcsF family - - - ko:K07160 - - - - ko00000 - - - LamB_YcsF WXD2_k127_1802306_1 234267.Acid_4563 6.513e-131 430.0 COG0477@1|root,COG2814@2|Bacteria,3Y3ZZ@57723|Acidobacteria 57723|Acidobacteria EGP major facilitator superfamily - - - - - - - - - - - - MFS_1 WXD2_k127_1802306_13 867903.ThesuDRAFT_00671 4.106e-05 56.0 COG1466@1|root,COG1466@2|Bacteria,1TRM0@1239|Firmicutes,24ASN@186801|Clostridia,3WCPH@538999|Clostridiales incertae sedis 186801|Clostridia L DNA polymerase III, delta subunit holA - 2.7.7.7 ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_delta WXD2_k127_1802306_11 1267533.KB906735_gene5065 3.965e-19 94.0 COG1734@1|root,COG1734@2|Bacteria,3Y5PJ@57723|Acidobacteria,2JK2N@204432|Acidobacteriia 204432|Acidobacteriia T Prokaryotic dksA/traR C4-type zinc finger - - - ko:K06204 ko02026,map02026 - - - ko00000,ko00001,ko03000,ko03009,ko03021 - - - zf-dskA_traR WXD2_k127_1802306_9 398767.Glov_3630 1.113e-26 117.0 COG1576@1|root,COG1576@2|Bacteria,1N7WB@1224|Proteobacteria,42V41@68525|delta/epsilon subdivisions,2X6IT@28221|Deltaproteobacteria 28221|Deltaproteobacteria J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA rlmH - 2.1.1.177 ko:K00783 - - - - ko00000,ko01000,ko03009 - - - SPOUT_MTase WXD2_k127_1802306_4 204669.Acid345_0023 6.752e-77 271.0 COG2204@1|root,COG2204@2|Bacteria,3Y38J@57723|Acidobacteria,2JICQ@204432|Acidobacteriia 57723|Acidobacteria T PFAM Response regulator receiver domain - - - - - - - - - - - - HTH_8,Sigma54_activat WXD2_k127_1802306_10 661087.HMPREF1008_01380 1.187e-24 112.0 COG0799@1|root,COG0799@2|Bacteria,2IKZ3@201174|Actinobacteria,4CVU7@84998|Coriobacteriia 84998|Coriobacteriia J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation rsfS - - ko:K09710 - - - - ko00000,ko03009 - - - RsfS WXD2_k127_1802306_6 1043493.BBLU01000002_gene1868 2.38e-37 150.0 COG1057@1|root,COG1057@2|Bacteria,2GMFZ@201174|Actinobacteria 201174|Actinobacteria H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) nadD GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0040007,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 ko:K00969 ko00760,ko01100,map00760,map01100 M00115 R00137,R03005 RC00002 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_like WXD2_k127_1802306_2 289376.THEYE_A0433 2.296e-113 379.0 COG0536@1|root,COG0536@2|Bacteria,3J0E3@40117|Nitrospirae 40117|Nitrospirae S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control obg - - ko:K03979 - - - - ko00000,ko01000,ko03009 - - - GTP1_OBG,MMR_HSR1 WXD2_k127_1802306_7 1499967.BAYZ01000165_gene6645 2.217e-32 128.0 COG0211@1|root,COG0211@2|Bacteria,2NPSU@2323|unclassified Bacteria 2|Bacteria J Belongs to the bacterial ribosomal protein bL27 family rpmA GO:0000027,GO:0001558,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0040008,GO:0042254,GO:0042255,GO:0042256,GO:0042273,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048518,GO:0050789,GO:0050794,GO:0051128,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 - ko:K02899 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L27 WXD2_k127_1802306_8 1254432.SCE1572_45530 6.655e-29 119.0 COG0261@1|root,COG0261@2|Bacteria,1MZEW@1224|Proteobacteria,42SGM@68525|delta/epsilon subdivisions,2WQ3I@28221|Deltaproteobacteria,2YVHC@29|Myxococcales 28221|Deltaproteobacteria J This protein binds to 23S rRNA in the presence of protein L20 rplU GO:0003674,GO:0003735,GO:0005198 - ko:K02888 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L21p WXD2_k127_1822051_8 485913.Krac_8211 2.497e-17 86.0 COG1595@1|root,COG1595@2|Bacteria,2G93G@200795|Chloroflexi 200795|Chloroflexi K RNA polymerase, sigma-24 subunit, ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 WXD2_k127_1822051_2 1122138.AQUZ01000044_gene4502 5.057e-71 251.0 COG0701@1|root,COG0701@2|Bacteria,2HZBT@201174|Actinobacteria 201174|Actinobacteria S Predicted permease - - - - - - - - - - - - ArsP_1 WXD2_k127_1822051_10 946483.Cenrod_0532 8.683e-10 69.0 COG0642@1|root,COG0784@1|root,COG2198@1|root,COG0784@2|Bacteria,COG2198@2|Bacteria,COG2205@2|Bacteria,1NRP8@1224|Proteobacteria,2VGZQ@28216|Betaproteobacteria,4AA9F@80864|Comamonadaceae 28216|Betaproteobacteria T Histidine kinase - - - - - - - - - - - - HATPase_c,HisKA,Hpt,PAS_3,PAS_9,Response_reg,dCache_1 WXD2_k127_1822051_7 1267534.KB906760_gene1343 1.128e-18 100.0 COG0457@1|root,COG3710@1|root,COG5616@1|root,COG0457@2|Bacteria,COG3710@2|Bacteria,COG5616@2|Bacteria,3Y2HR@57723|Acidobacteria,2JI02@204432|Acidobacteriia 204432|Acidobacteriia KLT Tetratricopeptide repeats - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase,TPR_16,TPR_2,Trans_reg_C WXD2_k127_1822051_1 420324.KI912037_gene2397 9.76e-128 428.0 COG1073@1|root,COG2114@1|root,COG1073@2|Bacteria,COG2114@2|Bacteria,1QWKB@1224|Proteobacteria,2TX0H@28211|Alphaproteobacteria 28211|Alphaproteobacteria KT Serine aminopeptidase, S33 - - - - - - - - - - - - Abhydrolase_1,GerE,Guanylate_cyc,Hydrolase_4 WXD2_k127_1822051_5 1125863.JAFN01000001_gene2065 1.172e-38 157.0 COG2199@1|root,COG3706@2|Bacteria,1R7HC@1224|Proteobacteria,42M4Q@68525|delta/epsilon subdivisions,2X5DU@28221|Deltaproteobacteria 28221|Deltaproteobacteria T Diguanylate cyclase - - - - - - - - - - - iAF987.Gmet_0069 GGDEF,Response_reg WXD2_k127_1822051_4 1237500.ANBA01000008_gene95 2.102e-42 166.0 COG3832@1|root,COG3832@2|Bacteria,2IQUJ@201174|Actinobacteria 201174|Actinobacteria J glyoxalase III activity - - - - - - - - - - - - AHSA1 WXD2_k127_1822051_6 713587.THITH_11340 5.033e-20 99.0 28N9P@1|root,2ZBDN@2|Bacteria,1R70P@1224|Proteobacteria,1RQ5R@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Protein of unknown function (DUF3592) - - - - - - - - - - - - DUF3592 WXD2_k127_1822051_9 671143.DAMO_2718 3.129e-13 78.0 2C7J2@1|root,33AYB@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_1822051_3 439375.Oant_2882 4.394e-63 228.0 COG0558@1|root,COG0558@2|Bacteria,1RE0I@1224|Proteobacteria,2U8YN@28211|Alphaproteobacteria,1J3MI@118882|Brucellaceae 28211|Alphaproteobacteria I CDP-alcohol phosphatidyltransferase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.8.5 ko:K00995 ko00564,ko01100,map00564,map01100 - R01801 RC00002,RC00017,RC02795 ko00000,ko00001,ko01000 - - - CDP-OH_P_transf WXD2_k127_1822051_0 757424.Hsero_0079 1.321e-264 826.0 COG2267@1|root,COG2267@2|Bacteria,1MWF5@1224|Proteobacteria,2VNMX@28216|Betaproteobacteria 28216|Betaproteobacteria I Alpha beta hydrolase - - - - - - - - - - - - Hydrolase_4,Methyltransf_20 WXD2_k127_1828601_5 266117.Rxyl_1786 4.779e-58 210.0 COG0266@1|root,COG0266@2|Bacteria,2H39J@201174|Actinobacteria,4CPW5@84995|Rubrobacteria 84995|Rubrobacteria L Formamidopyrimidine-DNA glycosylase H2TH domain - - 3.2.2.23,4.2.99.18 ko:K10563 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Fapy_DNA_glyco,H2TH WXD2_k127_1828601_1 1198452.Jab_1c00090 6.189e-223 705.0 COG4805@1|root,COG4805@2|Bacteria,1MUBX@1224|Proteobacteria,2W0VY@28216|Betaproteobacteria,476S6@75682|Oxalobacteraceae 28216|Betaproteobacteria S Bacterial protein of unknown function (DUF885) - - - - - - - - - - - - DUF885 WXD2_k127_1828601_7 65393.PCC7424_3600 2.669e-13 75.0 COG0745@1|root,COG0745@2|Bacteria,1G2ME@1117|Cyanobacteria,3KGZN@43988|Cyanothece 1117|Cyanobacteria K PFAM response regulator receiver phoB - - ko:K07657 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C WXD2_k127_1828601_6 1382359.JIAL01000001_gene2441 2.278e-46 174.0 COG0457@1|root,COG0457@2|Bacteria,3Y4VN@57723|Acidobacteria,2JJG5@204432|Acidobacteriia 204432|Acidobacteriia S Protein of unknown function (DUF2911) - - - - - - - - - - - - DUF2911 WXD2_k127_1828601_3 700598.Niako_6295 2.202e-133 443.0 COG2159@1|root,COG2159@2|Bacteria,4NG9U@976|Bacteroidetes,1IWYY@117747|Sphingobacteriia 976|Bacteroidetes S Amidohydrolase - - - - - - - - - - - - Amidohydro_2 WXD2_k127_1828601_0 1519464.HY22_00255 0.0 1139.0 COG4447@1|root,COG4447@2|Bacteria 2|Bacteria S cellulose binding - - - - - - - - - - - - Sortilin-Vps10 WXD2_k127_1828601_2 234267.Acid_4435 1.769e-148 496.0 COG3303@1|root,COG3303@2|Bacteria,3Y84F@57723|Acidobacteria 57723|Acidobacteria C Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - - - - - - - - - - - WXD2_k127_1828601_4 234267.Acid_7896 6.722e-61 222.0 COG3005@1|root,COG3005@2|Bacteria,3Y4BJ@57723|Acidobacteria 57723|Acidobacteria C Doubled CXXCH motif (Paired_CXXCH_1) - - - - - - - - - - - - Paired_CXXCH_1 WXD2_k127_1828601_8 1340493.JNIF01000003_gene1663 6.021e-11 76.0 28MCK@1|root,2ZAQP@2|Bacteria,3Y41I@57723|Acidobacteria 57723|Acidobacteria - - - - - - - - - - - - - - - WXD2_k127_1838439_1 215803.DB30_4353 1.533e-161 520.0 COG0183@1|root,COG0183@2|Bacteria,1MU5G@1224|Proteobacteria,42N7F@68525|delta/epsilon subdivisions,2WJB2@28221|Deltaproteobacteria,2YUH3@29|Myxococcales 28221|Deltaproteobacteria I Belongs to the thiolase family fadI - 2.3.1.16,2.3.1.9 ko:K00626,ko:K00632 ko00071,ko00072,ko00280,ko00281,ko00310,ko00362,ko00380,ko00592,ko00620,ko00630,ko00640,ko00642,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00281,map00310,map00362,map00380,map00592,map00620,map00630,map00640,map00642,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 M00087,M00088,M00095,M00113,M00373,M00374,M00375 R00238,R00829,R00927,R01177,R03778,R03858,R03991,R04546,R04742,R04747,R05506,R05586,R07891,R07895,R07899,R08091,R08095 RC00004,RC00326,RC00405,RC01702,RC02728,RC02898,RC02955 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Thiolase_C,Thiolase_N WXD2_k127_1838439_0 215803.DB30_4795 8.453e-252 799.0 COG0243@1|root,COG0243@2|Bacteria,1NR6J@1224|Proteobacteria,42MYN@68525|delta/epsilon subdivisions,2WIWN@28221|Deltaproteobacteria,2Z2YC@29|Myxococcales 28221|Deltaproteobacteria C Molybdopterin oxidoreductase Fe4S4 domain - - - - - - - - - - - - Molybdop_Fe4S4,Molybdopterin,Molydop_binding WXD2_k127_1838439_3 29486.NJ56_05785 0.0008695 50.0 COG1266@1|root,COG1266@2|Bacteria,1P0IE@1224|Proteobacteria,1RS9M@1236|Gammaproteobacteria,41EH2@629|Yersinia 1236|Gammaproteobacteria S CAAX protease self-immunity - - - ko:K07052 - - - - ko00000 - - - Abi WXD2_k127_1838439_2 66897.DJ64_12145 1.29e-12 77.0 COG2013@1|root,COG2013@2|Bacteria,2GNEK@201174|Actinobacteria 201174|Actinobacteria S Mitochondrial biogenesis AIM24 - - - - - - - - - - - - AIM24 WXD2_k127_1858672_4 1047013.AQSP01000028_gene2076 1.645e-06 61.0 COG3379@1|root,COG3379@2|Bacteria 2|Bacteria S Type I phosphodiesterase / nucleotide pyrophosphatase - - - - - - - - - - - - Phosphodiest,Sulfotransfer_1,TPR_16,TPR_19 WXD2_k127_1858672_1 379066.GAU_2720 1.363e-100 363.0 COG0827@1|root,COG1002@1|root,COG0827@2|Bacteria,COG1002@2|Bacteria,1ZT3Q@142182|Gemmatimonadetes 142182|Gemmatimonadetes LV DNA restriction-modification system - - - - - - - - - - - - N6_Mtase WXD2_k127_1858672_3 1416752.AYME01000005_gene1710 4.474e-29 134.0 COG0553@1|root,COG1502@1|root,COG0553@2|Bacteria,COG1502@2|Bacteria,2GM2V@201174|Actinobacteria,4FPG2@85023|Microbacteriaceae 201174|Actinobacteria L SNF2 family N-terminal domain - - - - - - - - - - - - Helicase_C,PLDc_2,ResIII,SNF2_N WXD2_k127_1858672_0 671143.DAMO_3009 3.81e-127 434.0 COG2204@1|root,COG2204@2|Bacteria,2NNWS@2323|unclassified Bacteria 2|Bacteria T Two component, sigma54 specific, transcriptional regulator, Fis family pilR - - ko:K02667 ko02020,map02020 M00501 - - ko00000,ko00001,ko00002,ko02022,ko02035 - - - HTH_8,Response_reg,Sigma54_activat WXD2_k127_1858672_2 1163409.UUA_14424 2.526e-30 126.0 COG1430@1|root,COG1430@2|Bacteria,1MZBJ@1224|Proteobacteria,1SDD5@1236|Gammaproteobacteria,1X6IQ@135614|Xanthomonadales 135614|Xanthomonadales S Uncharacterized ACR, COG1430 - - - ko:K09005 - - - - ko00000 - - - DUF192 WXD2_k127_1858672_5 373903.Hore_08350 2.324e-06 59.0 COG0705@1|root,COG0705@2|Bacteria,1TSBP@1239|Firmicutes,249D8@186801|Clostridia 186801|Clostridia S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - Rhomboid WXD2_k127_1858672_6 1125725.HMPREF1325_1151 0.0002061 44.0 COG0720@1|root,COG0720@2|Bacteria,2J80J@203691|Spirochaetes 203691|Spirochaetes H 6-pyruvoyl tetrahydropterin synthase QueD family protein queD - 4.1.2.50,4.2.3.12 ko:K01737 ko00790,ko01100,map00790,map01100 M00842,M00843 R04286,R09959 RC01117,RC02846,RC02847 ko00000,ko00001,ko00002,ko01000,ko03016 - - - PTPS WXD2_k127_1865134_3 1944.JOAZ01000008_gene964 4.451e-113 398.0 COG0072@1|root,COG0072@2|Bacteria,2GMFD@201174|Actinobacteria,41A0K@629295|Streptomyces griseus group 201174|Actinobacteria J tRNA synthetase B5 domain pheT - 6.1.1.20 ko:K01890 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - B3_4,B5,FDX-ACB,tRNA_bind WXD2_k127_1865134_5 1944.JOAZ01000008_gene963 1.218e-91 334.0 COG0016@1|root,COG0016@2|Bacteria,2GJGG@201174|Actinobacteria,417G5@629295|Streptomyces griseus group 2|Bacteria J tRNA synthetases class II core domain (F) pheS GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 ko:K01889 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - FDX-ACB,Phe_tRNA-synt_N,tRNA-synt_2d WXD2_k127_1865134_2 1121430.JMLG01000037_gene147 8.404e-126 437.0 COG1190@1|root,COG1190@2|Bacteria,1TP2P@1239|Firmicutes,247VX@186801|Clostridia,260CD@186807|Peptococcaceae 186801|Clostridia J Belongs to the class-II aminoacyl-tRNA synthetase family lysS - 6.1.1.6 ko:K04567 ko00970,map00970 M00359,M00360 R03658 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_2,tRNA_anti-codon,tRNA_bind WXD2_k127_1865134_1 861299.J421_4340 1.5e-156 503.0 COG0520@1|root,COG0520@2|Bacteria,1ZSV8@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Aminotransferase class-V - - - - - - - - - - - - Aminotran_5 WXD2_k127_1865134_7 291112.PAU_03378 1.082e-13 78.0 COG0607@1|root,COG0640@1|root,COG0607@2|Bacteria,COG0640@2|Bacteria,1R71B@1224|Proteobacteria,1S2D9@1236|Gammaproteobacteria 1236|Gammaproteobacteria K transcriptional regulator, ArsR family - - - - - - - - - - - - HTH_20,HTH_5,Rhodanese WXD2_k127_1865134_10 997350.HMPREF9129_0443 3.499e-07 57.0 COG0607@1|root,COG0607@2|Bacteria,1V5BS@1239|Firmicutes,24H9M@186801|Clostridia,22HW7@1570339|Peptoniphilaceae 186801|Clostridia P Rhodanese Homology Domain - - - ko:K03972 - - - - ko00000 - - - Rhodanese WXD2_k127_1865134_11 278963.ATWD01000002_gene620 0.0004132 43.0 COG0586@1|root,COG0607@1|root,COG0586@2|Bacteria,COG0607@2|Bacteria,3Y3N9@57723|Acidobacteria,2JHWT@204432|Acidobacteriia 204432|Acidobacteriia P SNARE associated Golgi protein - - - - - - - - - - - - Rhodanese,SNARE_assoc WXD2_k127_1865134_6 1293048.CBMB010000004_gene2475 2.28e-27 119.0 COG4635@1|root,arCOG00524@2157|Archaea,2XWSS@28890|Euryarchaeota,23V70@183963|Halobacteria 183963|Halobacteria C COG4635 Flavodoxin - - 1.3.5.3 ko:K00230 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R09489 RC00885 ko00000,ko00001,ko00002,ko01000 - - - Flavodoxin_5 WXD2_k127_1865134_8 1121920.AUAU01000013_gene1716 1.515e-12 76.0 COG4313@1|root,COG4313@2|Bacteria,3Y7K3@57723|Acidobacteria 57723|Acidobacteria C Protein involved in meta-pathway of phenol degradation - - - - - - - - - - - - - WXD2_k127_1865134_9 391612.CY0110_28224 3.662e-08 64.0 2DBIE@1|root,32TXH@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_1865134_4 1382304.JNIL01000001_gene1129 4.366e-93 321.0 COG0436@1|root,COG0436@2|Bacteria,1TP0J@1239|Firmicutes 1239|Firmicutes E Aminotransferase - - - - - - - - - - - - Aminotran_1_2 WXD2_k127_1865134_0 485915.Dret_1750 3.632e-252 818.0 COG0021@1|root,COG0021@2|Bacteria 2|Bacteria G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate - - 2.2.1.1 ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R01067,R01641,R01830,R06590 RC00032,RC00226,RC00571,RC01560 ko00000,ko00001,ko00002,ko01000 - - - Transket_pyr,Transketolase_N,XFP,XFP_N WXD2_k127_1869946_5 633148.Tagg_0528 7.847e-45 170.0 COG0235@1|root,arCOG04226@2157|Archaea,2XQGF@28889|Crenarchaeota 28889|Crenarchaeota G Class II aldolase adducin family protein - - 4.1.2.17 ko:K01628 ko00051,ko01120,map00051,map01120 - R02262 RC00603,RC00604 ko00000,ko00001,ko01000 - - - Aldolase_II WXD2_k127_1869946_0 234267.Acid_0997 6.308e-190 602.0 COG0318@1|root,COG0318@2|Bacteria 2|Bacteria IQ PFAM AMP-dependent synthetase and ligase fadD36 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0051087 - ko:K12429,ko:K18660,ko:K18661,ko:K18662 ko00280,map00280 - R03383 RC00004,RC00137 ko00000,ko00001,ko01000,ko01004 - - - AMP-binding,AMP-binding_C WXD2_k127_1869946_4 223926.28806987 1.864e-84 286.0 COG1136@1|root,COG1136@2|Bacteria,1MU45@1224|Proteobacteria,1RNUJ@1236|Gammaproteobacteria,1XSYR@135623|Vibrionales 135623|Vibrionales V Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides macB - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran WXD2_k127_1869946_2 518766.Rmar_1442 1.793e-101 345.0 COG0577@1|root,COG0577@2|Bacteria,4NECN@976|Bacteroidetes,1FIY8@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD WXD2_k127_1869946_1 518766.Rmar_1441 6.589e-102 345.0 COG0577@1|root,COG0577@2|Bacteria,4NEBD@976|Bacteroidetes 976|Bacteroidetes V ABC-type antimicrobial peptide transport system, permease component - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD WXD2_k127_1869946_3 1047013.AQSP01000056_gene1919 1.17e-85 298.0 COG0845@1|root,COG0845@2|Bacteria,2NR6A@2323|unclassified Bacteria 2|Bacteria M Barrel-sandwich domain of CusB or HlyD membrane-fusion VVA1500 - - ko:K02005 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23,OEP WXD2_k127_1896754_1 1429851.X548_04965 7.697e-63 221.0 COG0500@1|root,COG0500@2|Bacteria,1R947@1224|Proteobacteria,1SUF1@1236|Gammaproteobacteria,1X4RG@135614|Xanthomonadales 135614|Xanthomonadales Q Methyltransferase - - - - - - - - - - - - Methyltransf_12,Methyltransf_23,Methyltransf_25 WXD2_k127_1896754_0 479434.Sthe_0156 1.36e-125 415.0 COG3850@1|root,COG3850@2|Bacteria,2GBH4@200795|Chloroflexi,27XF0@189775|Thermomicrobia 189775|Thermomicrobia T Histidine kinase - - - - - - - - - - - - GAF_2,HATPase_c,HisKA_3 WXD2_k127_1896754_2 479434.Sthe_0155 1.556e-61 218.0 COG2197@1|root,COG2197@2|Bacteria,2G8EU@200795|Chloroflexi,27XKP@189775|Thermomicrobia 189775|Thermomicrobia K helix_turn_helix, Lux Regulon - - - - - - - - - - - - GerE,Response_reg WXD2_k127_1910285_6 204669.Acid345_3357 1.562e-105 376.0 COG4191@1|root,COG4191@2|Bacteria,3Y3X4@57723|Acidobacteria,2JING@204432|Acidobacteriia 204432|Acidobacteriia T Histidine kinase - - - - - - - - - - - - GAF_2,GAF_3,HATPase_c,HisKA,HisKA_7TM,PAS,PAS_4 WXD2_k127_1910285_2 1047013.AQSP01000083_gene1192 3.243e-151 491.0 COG2204@1|root,COG2204@2|Bacteria,2NNPN@2323|unclassified Bacteria 2|Bacteria T COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains nla19 - - ko:K07713,ko:K07714,ko:K19641 ko02020,map02020 M00499,M00500,M00772 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat WXD2_k127_1910285_3 518766.Rmar_0074 7.096e-151 509.0 COG2866@1|root,COG2866@2|Bacteria,4NEJA@976|Bacteroidetes,1FIRV@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes M Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain - - - - - - - - - - - - ABC_transp_aux,Peptidase_M14 WXD2_k127_1910285_7 204669.Acid345_3359 1.017e-75 283.0 COG1355@1|root,COG1355@2|Bacteria,3Y5Z0@57723|Acidobacteria,2JNSZ@204432|Acidobacteriia 204432|Acidobacteriia S Memo-like protein - - - ko:K06990 - - - - ko00000,ko04812 - - - Memo WXD2_k127_1910285_5 316067.Geob_1010 2.607e-119 411.0 COG0297@1|root,COG0297@2|Bacteria,1MUGM@1224|Proteobacteria,42MT8@68525|delta/epsilon subdivisions,2WITI@28221|Deltaproteobacteria 28221|Deltaproteobacteria G Synthesizes alpha-1,4-glucan chains using ADP-glucose glgA-2 GO:0000271,GO:0003674,GO:0003824,GO:0004373,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 ko:K00703 ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026 M00565 R02421 RC00005 ko00000,ko00001,ko00002,ko01000,ko01003 - GT5 - Alpha-amylase,Glyco_transf_5,Glycos_transf_1 WXD2_k127_1910285_9 1282361.ABAC402_06885 1.519e-38 165.0 COG1956@1|root,COG1956@2|Bacteria,1RDBM@1224|Proteobacteria,2U595@28211|Alphaproteobacteria,2KG9G@204458|Caulobacterales 204458|Caulobacterales T GAF domain - - 1.8.4.14 ko:K08968 ko00270,map00270 - R02025 RC00639 ko00000,ko00001,ko01000 - - - GAF_2 WXD2_k127_1910285_14 1267533.KB906740_gene246 1.678e-24 107.0 COG0789@1|root,COG0789@2|Bacteria,3Y56I@57723|Acidobacteria,2JJNQ@204432|Acidobacteriia 204432|Acidobacteriia K Regulatory protein - - - - - - - - - - - - MerR_1 WXD2_k127_1910285_0 290397.Adeh_0476 7.351e-261 824.0 COG0068@1|root,COG0068@2|Bacteria,1MVP8@1224|Proteobacteria,42M3G@68525|delta/epsilon subdivisions,2WJ51@28221|Deltaproteobacteria,2YTV0@29|Myxococcales 28221|Deltaproteobacteria O Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide hypF - - ko:K04656 - - - - ko00000 - - - Acylphosphatase,Sua5_yciO_yrdC,zf-HYPF WXD2_k127_1910285_13 404589.Anae109_0517 1.42e-24 117.0 COG0298@1|root,COG0298@2|Bacteria 2|Bacteria O carbon dioxide binding hypC - - ko:K04653,ko:K04654 - - - - ko00000 - - - HupF_HypC WXD2_k127_1910285_1 290397.Adeh_0474 7.127e-155 497.0 COG0409@1|root,COG0409@2|Bacteria,1MU1F@1224|Proteobacteria,42M6R@68525|delta/epsilon subdivisions,2WJDQ@28221|Deltaproteobacteria,2YTV5@29|Myxococcales 28221|Deltaproteobacteria O Belongs to the HypD family hypD - - ko:K04654 - - - - ko00000 - - iAF987.Gmet_0117 HypD WXD2_k127_1910285_4 290397.Adeh_0473 2.465e-131 445.0 COG0309@1|root,COG0309@2|Bacteria,1MVCC@1224|Proteobacteria,42M3M@68525|delta/epsilon subdivisions,2WJ8B@28221|Deltaproteobacteria,2YTZM@29|Myxococcales 28221|Deltaproteobacteria O hydrogenase expression formation protein HypE hypE - - ko:K04655 - - - - ko00000 - - - AIRS,AIRS_C WXD2_k127_1910285_15 550540.Fbal_1253 6.914e-17 89.0 COG0299@1|root,COG0299@2|Bacteria,1MWN1@1224|Proteobacteria,1RMHS@1236|Gammaproteobacteria 1236|Gammaproteobacteria F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate purN GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 2.1.2.2 ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 M00048 R04325,R04326 RC00026,RC00197,RC01128 ko00000,ko00001,ko00002,ko01000 - - iAF1260.b2500,iBWG_1329.BWG_2264,iECDH10B_1368.ECDH10B_2666,iECDH1ME8569_1439.ECDH1ME8569_2426,iEcDH1_1363.EcDH1_1169,iJO1366.b2500,iJR904.b2500,iY75_1357.Y75_RS13050 Formyl_trans_N WXD2_k127_1910285_8 671143.DAMO_2567 5.155e-42 174.0 COG1024@1|root,COG1024@2|Bacteria,2NPAC@2323|unclassified Bacteria 2|Bacteria I Belongs to the enoyl-CoA hydratase isomerase family MA20_16935 - 5.3.3.18 ko:K15866 ko00360,ko01120,map00360,map01120 - R09837,R09839 RC00004,RC00326,RC02689,RC03003 ko00000,ko00001,ko01000 - - - ECH_1 WXD2_k127_1910285_11 1047013.AQSP01000139_gene2339 7.203e-30 127.0 COG2836@1|root,COG2836@2|Bacteria 2|Bacteria K Biogenesis protein - - - - - - - - - - - - DsbD_2 WXD2_k127_1910285_12 1173028.ANKO01000174_gene2707 6.976e-28 121.0 COG0412@1|root,COG0412@2|Bacteria,1G1CY@1117|Cyanobacteria,1HB6M@1150|Oscillatoriales 1117|Cyanobacteria Q Dienelactone hydrolase family - - - - - - - - - - - - DLH WXD2_k127_1911029_3 1385515.N791_02140 1.059e-42 164.0 COG0494@1|root,COG0494@2|Bacteria,1RI3B@1224|Proteobacteria,1S6HR@1236|Gammaproteobacteria,1X60F@135614|Xanthomonadales 135614|Xanthomonadales L DNA mismatch repair protein MutT - - 3.6.1.13 ko:K01515 ko00230,map00230 - R01054 RC00002 ko00000,ko00001,ko01000 - - - NUDIX WXD2_k127_1911029_0 266117.Rxyl_3138 1.227e-135 440.0 COG1533@1|root,COG1533@2|Bacteria,2GM31@201174|Actinobacteria,4CQAG@84995|Rubrobacteria 84995|Rubrobacteria L Radical SAM - - - - - - - - - - - - Radical_SAM WXD2_k127_1911029_1 861299.J421_1512 7.493e-129 423.0 COG2270@1|root,COG2270@2|Bacteria 2|Bacteria G Major facilitator Superfamily cmr - 2.7.4.9 ko:K00943,ko:K08217,ko:K18833 ko00240,ko01100,map00240,map01100 M00053 R02094,R02098 RC00002 br01600,ko00000,ko00001,ko00002,ko01000,ko01504,ko02000 2.A.1.21.1,2.A.1.21.2,2.A.1.21.22 - - MFS_1,MFS_3 WXD2_k127_1911029_4 1298863.AUEP01000008_gene1152 1.704e-12 75.0 COG1309@1|root,COG1309@2|Bacteria,2HK4X@201174|Actinobacteria,4DQZI@85009|Propionibacteriales 201174|Actinobacteria K transcriptional regulator, TetR family kstR2 GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005515,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042802,GO:0042803,GO:0046983,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - ko:K22108 - - - - ko00000,ko03000 - - - TetR_C_4,TetR_N WXD2_k127_1911029_2 1123269.NX02_18885 3.408e-116 385.0 COG2866@1|root,COG2866@2|Bacteria,1N9W9@1224|Proteobacteria,2U2SA@28211|Alphaproteobacteria,2K2QH@204457|Sphingomonadales 204457|Sphingomonadales E Zinc carboxypeptidase - - - - - - - - - - - - Peptidase_M14 WXD2_k127_1917024_6 1410622.JNKY01000003_gene1884 5.46e-06 48.0 2DER4@1|root,2ZNXD@2|Bacteria,1W32Q@1239|Firmicutes,24UYB@186801|Clostridia 186801|Clostridia - - - - - - - - - - - - - - - WXD2_k127_1917024_1 264201.pc1062 6.279e-81 288.0 COG0318@1|root,COG0318@2|Bacteria,2JFYB@204428|Chlamydiae 204428|Chlamydiae IQ AMP-binding enzyme menE - 6.2.1.26 ko:K01911 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R04030 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000 - - - AMP-binding WXD2_k127_1917024_3 349741.Amuc_1816 4.251e-49 195.0 COG4948@1|root,COG4948@2|Bacteria,46X7I@74201|Verrucomicrobia,2IUF3@203494|Verrucomicrobiae 203494|Verrucomicrobiae M Mandelate Racemase Muconate Lactonizing - - 4.2.1.113 ko:K02549 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R04031 RC01053 ko00000,ko00001,ko00002,ko01000 - - - MR_MLE_C WXD2_k127_1917024_2 867845.KI911784_gene2772 2.658e-70 248.0 COG1575@1|root,COG1575@2|Bacteria,2G5ZC@200795|Chloroflexi,376AE@32061|Chloroflexia 32061|Chloroflexia H Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK) menA - 2.5.1.74 ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R05617,R06858,R10757 RC02935,RC02936,RC03264 ko00000,ko00001,ko00002,ko01000,ko01006 - - - UbiA WXD2_k127_1917024_0 1396141.BATP01000045_gene1741 2.181e-136 443.0 COG0447@1|root,COG0447@2|Bacteria,46Z3Z@74201|Verrucomicrobia,2ITPX@203494|Verrucomicrobiae 203494|Verrucomicrobiae H Enoyl-CoA hydratase/isomerase menB - 4.1.3.36 ko:K01661 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R07263 RC01923 ko00000,ko00001,ko00002,ko01000 - - - ECH_1 WXD2_k127_1917024_5 1123070.KB899249_gene437 5.984e-28 125.0 COG2267@1|root,COG2267@2|Bacteria,46WQX@74201|Verrucomicrobia,2IUN2@203494|Verrucomicrobiae 203494|Verrucomicrobiae I Alpha/beta hydrolase family - - 4.2.99.20 ko:K08680 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R08166 RC02148,RC02475 ko00000,ko00001,ko00002,ko01000 - - - Abhydrolase_6 WXD2_k127_1917024_4 765869.BDW_12900 3.506e-29 120.0 COG1165@1|root,COG1165@2|Bacteria,1MVMZ@1224|Proteobacteria,42PNC@68525|delta/epsilon subdivisions,2MT3I@213481|Bdellovibrionales,2WKSZ@28221|Deltaproteobacteria 213481|Bdellovibrionales H Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) menD - 2.2.1.9 ko:K02551 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R08165 RC02186 ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C,TPP_enzyme_M_2,TPP_enzyme_N WXD2_k127_191737_2 357804.Ping_0248 3.105e-82 312.0 COG2931@1|root,COG4932@1|root,COG2931@2|Bacteria,COG4932@2|Bacteria 2|Bacteria M domain protein - GO:0001968,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0044877,GO:0051704,GO:0070051,GO:0098630,GO:0098743 - ko:K13732,ko:K13733 ko05100,map05100 - - - ko00000,ko00001 - - - Collagen_bind,Gram_pos_anchor,HemolysinCabind,MucBP,SdrG_C_C,YSIRK_signal WXD2_k127_191737_3 1380347.JNII01000005_gene2882 1.838e-49 205.0 COG1520@1|root,COG4932@1|root,COG1520@2|Bacteria,COG4932@2|Bacteria,2GPF1@201174|Actinobacteria 201174|Actinobacteria M HYR domain - - - - - - - - - - - - HYR WXD2_k127_191737_0 378806.STAUR_4566 6.848e-115 381.0 COG2220@1|root,COG2220@2|Bacteria,1MV20@1224|Proteobacteria,42QY0@68525|delta/epsilon subdivisions,2WMTP@28221|Deltaproteobacteria,2YWVG@29|Myxococcales 28221|Deltaproteobacteria S Beta-lactamase superfamily domain - - - - - - - - - - - - Lactamase_B_2 WXD2_k127_191737_1 204669.Acid345_3068 2.055e-94 328.0 COG2203@1|root,COG2208@1|root,COG2203@2|Bacteria,COG2208@2|Bacteria,3Y4A2@57723|Acidobacteria,2JJ6J@204432|Acidobacteriia 204432|Acidobacteriia KT Sigma factor PP2C-like phosphatases - - - - - - - - - - - - SpoIIE WXD2_k127_191737_4 1121438.JNJA01000003_gene3043 5.531e-31 130.0 COG1309@1|root,COG1309@2|Bacteria,1RCDH@1224|Proteobacteria,42VJ5@68525|delta/epsilon subdivisions,2WRC7@28221|Deltaproteobacteria,2M821@213115|Desulfovibrionales 28221|Deltaproteobacteria K Bacterial regulatory proteins, tetR family - - - - - - - - - - - - TetR_C_3,TetR_N WXD2_k127_1919392_8 234267.Acid_3697 2.63e-22 111.0 COG1287@1|root,COG1287@2|Bacteria,3Y5FJ@57723|Acidobacteria 57723|Acidobacteria S oligosaccharyl transferase activity - - - - - - - - - - - - - WXD2_k127_1919392_12 1463936.JOJI01000003_gene931 0.0003663 51.0 COG3595@1|root,COG3595@2|Bacteria,2I8IR@201174|Actinobacteria 201174|Actinobacteria T Putative adhesin - - - - - - - - - - - - DUF4097 WXD2_k127_1919392_11 1396418.BATQ01000142_gene3291 6.204e-05 50.0 COG1714@1|root,COG1714@2|Bacteria 2|Bacteria S RDD family - - - - - - - - - - - - RDD WXD2_k127_1919392_7 243230.DR_2203 6.486e-33 138.0 COG1739@1|root,COG1739@2|Bacteria,1WJVU@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S PFAM Uncharacterised protein family UPF0029, Impact, N-terminal - - - - - - - - - - - - DUF1949,UPF0029 WXD2_k127_1919392_6 1379270.AUXF01000004_gene3226 1.675e-47 188.0 COG2094@1|root,COG2094@2|Bacteria,1ZTNT@142182|Gemmatimonadetes 142182|Gemmatimonadetes L Methylpurine-DNA glycosylase (MPG) - - 3.2.2.21 ko:K03652 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Pur_DNA_glyco WXD2_k127_1919392_4 1387312.BAUS01000011_gene1928 2.07e-71 252.0 COG0483@1|root,COG0483@2|Bacteria,1MUQT@1224|Proteobacteria,2VIXG@28216|Betaproteobacteria,2KKRI@206350|Nitrosomonadales 206350|Nitrosomonadales G PFAM Inositol monophosphatase - - 3.1.3.25 ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 M00131 R01185,R01186,R01187 RC00078 ko00000,ko00001,ko00002,ko01000 - - - Inositol_P WXD2_k127_1919392_3 243231.GSU1320 1.367e-73 283.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2WIT0@28221|Deltaproteobacteria,43TS4@69541|Desulfuromonadales 28221|Deltaproteobacteria T response regulator - - - ko:K02481,ko:K07715 ko02020,ko02024,map02020,map02024 M00502 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat WXD2_k127_1919392_10 478741.JAFS01000002_gene266 1.143e-05 58.0 COG0457@1|root,COG0457@2|Bacteria,46YVP@74201|Verrucomicrobia,37G32@326457|unclassified Verrucomicrobia 478741.JAFS01000002_gene266|- S Tetratricopeptide repeat - - - - - - - - - - - - - WXD2_k127_1919392_5 1232410.KI421422_gene2064 2.108e-69 239.0 COG1207@1|root,COG1207@2|Bacteria,1MUPH@1224|Proteobacteria,42N3K@68525|delta/epsilon subdivisions,2WIMV@28221|Deltaproteobacteria,43RXN@69541|Desulfuromonadales 28221|Deltaproteobacteria M Nucleotidyl transferase glmU - 2.3.1.157,2.7.7.23 ko:K04042,ko:K11528 ko00520,ko01100,ko01130,map00520,map01100,map01130 M00362 R00416,R05332 RC00002,RC00004,RC00166 ko00000,ko00001,ko00002,ko01000 - - - Hexapep,NTP_transf_3,NTP_transferase WXD2_k127_1919392_2 1293597.BN147_02340 7.612e-75 261.0 COG1207@1|root,COG1207@2|Bacteria,1TP88@1239|Firmicutes,4H9V5@91061|Bacilli,3F4I3@33958|Lactobacillaceae 91061|Bacilli M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain glmU GO:0000270,GO:0000271,GO:0003674,GO:0003824,GO:0003977,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006629,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009252,GO:0009273,GO:0009987,GO:0016051,GO:0016740,GO:0016772,GO:0016779,GO:0030203,GO:0033692,GO:0034637,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0070569,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509 2.3.1.157,2.7.7.23 ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 M00362 R00416,R05332 RC00002,RC00004,RC00166 ko00000,ko00001,ko00002,ko01000 - - - Hexapep,Hexapep_2,NTP_transf_3,NTP_transferase WXD2_k127_1919392_1 1382359.JIAL01000001_gene1385 5.086e-91 316.0 COG0391@1|root,COG0391@2|Bacteria,3Y3ZE@57723|Acidobacteria,2JITK@204432|Acidobacteriia 204432|Acidobacteriia S Required for morphogenesis under gluconeogenic growth conditions - - - - - - - - - - - - UPF0052 WXD2_k127_1919392_9 525373.HMPREF0766_14255 6.975e-06 58.0 COG0518@1|root,COG0518@2|Bacteria,4NGC3@976|Bacteroidetes,1IPYJ@117747|Sphingobacteriia 976|Bacteroidetes F GMP synthase-glutamine amidotransferase - - - - - - - - - - - - GATase WXD2_k127_1919392_0 945713.IALB_1286 2.287e-134 434.0 COG2170@1|root,COG2170@2|Bacteria 2|Bacteria S glutamate-cysteine ligase activity ybdK GO:0003674,GO:0003824,GO:0016874,GO:0016879 - ko:K06048 - - - - ko00000,ko01000 - - - GCS2 WXD2_k127_1919449_2 234267.Acid_3928 1.799e-61 220.0 COG4947@1|root,COG4947@2|Bacteria,3Y4B1@57723|Acidobacteria 57723|Acidobacteria S esterase - - - - - - - - - - - - Esterase WXD2_k127_1919449_0 1198114.AciX9_2138 8.867e-108 359.0 COG0189@1|root,COG0189@2|Bacteria,3Y37D@57723|Acidobacteria,2JI05@204432|Acidobacteriia 204432|Acidobacteriia HJ ligase activity - - - - - - - - - - - - - WXD2_k127_1919449_1 945713.IALB_1286 4.747e-79 269.0 COG2170@1|root,COG2170@2|Bacteria 2|Bacteria S glutamate-cysteine ligase activity ybdK GO:0003674,GO:0003824,GO:0016874,GO:0016879 - ko:K06048 - - - - ko00000,ko01000 - - - GCS2 WXD2_k127_1928527_2 589865.DaAHT2_0397 8.084e-139 469.0 COG3005@1|root,COG3005@2|Bacteria,1QYGG@1224|Proteobacteria,42NFU@68525|delta/epsilon subdivisions,2WKHN@28221|Deltaproteobacteria,2MP53@213118|Desulfobacterales 28221|Deltaproteobacteria C PFAM doubled CXXCH domain protein - - - - - - - - - - - - Paired_CXXCH_1 WXD2_k127_1928527_4 1232410.KI421428_gene1053 1.456e-50 198.0 COG4191@1|root,COG4191@2|Bacteria,1N2VE@1224|Proteobacteria,43AY6@68525|delta/epsilon subdivisions,2X6CJ@28221|Deltaproteobacteria,43T05@69541|Desulfuromonadales 28221|Deltaproteobacteria T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - - - - - - - - - - HAMP,HATPase_c,HisKA WXD2_k127_1928527_3 1121918.ARWE01000001_gene445 4.538e-111 375.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2WKJX@28221|Deltaproteobacteria,43S25@69541|Desulfuromonadales 28221|Deltaproteobacteria T Domains REC, sigma54 interaction, HTH8 - - - - - - - - - - - - HTH_8,Response_reg,Sigma54_activat WXD2_k127_1928527_0 1121920.AUAU01000021_gene2510 1.797e-224 709.0 COG1013@1|root,COG1014@1|root,COG1013@2|Bacteria,COG1014@2|Bacteria,3Y3G3@57723|Acidobacteria 57723|Acidobacteria C Pyruvate ferredoxin/flavodoxin oxidoreductase - - 1.2.7.7 ko:K00187 ko00280,ko01100,map00280,map01100 - R07160,R08566,R08567 RC00004,RC02833,RC02856 br01601,ko00000,ko00001,ko01000 - - - POR,TPP_enzyme_C WXD2_k127_1928527_1 903818.KI912269_gene273 6.349e-191 608.0 COG0674@1|root,COG0674@2|Bacteria,3Y3NB@57723|Acidobacteria 57723|Acidobacteria C Pyruvate:ferredoxin oxidoreductase core domain II - - 1.2.7.7 ko:K00186 ko00280,ko01100,map00280,map01100 - R07160,R08566,R08567 RC00004,RC02833,RC02856 br01601,ko00000,ko00001,ko01000 - - - PFOR_II,POR_N WXD2_k127_192977_4 671143.DAMO_0676 4.867e-69 251.0 COG0815@1|root,COG0815@2|Bacteria,2NP0R@2323|unclassified Bacteria 2|Bacteria M Carbon-nitrogen hydrolase lnt - - ko:K03820 - - - - ko00000,ko01000 - GT2 - CN_hydrolase WXD2_k127_192977_3 1123278.KB893415_gene3493 1.511e-95 328.0 COG0508@1|root,COG0508@2|Bacteria,4NFB9@976|Bacteroidetes,47KP4@768503|Cytophagia 976|Bacteroidetes C The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) pdhC - 2.3.1.12 ko:K00627 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200 M00307 R00209,R02569 RC00004,RC02742,RC02857 br01601,ko00000,ko00001,ko00002,ko01000 - - - 2-oxoacid_dh,Biotin_lipoyl,E3_binding WXD2_k127_192977_0 266117.Rxyl_2324 8.005e-122 414.0 COG0022@1|root,COG0022@2|Bacteria,2GKFE@201174|Actinobacteria,4CRUB@84995|Rubrobacteria 84995|Rubrobacteria C Transketolase, pyrimidine binding domain - - 1.2.4.1 ko:K00162 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00307 R00014,R00209,R01699,R03270 RC00004,RC00027,RC00627,RC02742,RC02744,RC02882 br01601,ko00000,ko00001,ko00002,ko01000 - - - Transket_pyr,Transketolase_C WXD2_k127_192977_1 266117.Rxyl_2325 5.172e-114 381.0 COG1071@1|root,COG1071@2|Bacteria,2IBRC@201174|Actinobacteria,4CS4C@84995|Rubrobacteria 84995|Rubrobacteria C The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) pdhA - 1.2.4.1 ko:K00161 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00307 R00014,R00209,R01699,R03270 RC00004,RC00027,RC00627,RC02742,RC02744,RC02882 br01601,ko00000,ko00001,ko00002,ko01000 - - - E1_dh WXD2_k127_192977_2 278963.ATWD01000001_gene3597 2.555e-97 333.0 COG0477@1|root,COG2814@2|Bacteria,3Y47I@57723|Acidobacteria,2JJ64@204432|Acidobacteriia 204432|Acidobacteriia EGP Transmembrane secretion effector - - - - - - - - - - - - MFS_3 WXD2_k127_1933647_2 266117.Rxyl_0056 2.755e-131 426.0 COG1064@1|root,COG1064@2|Bacteria,2GNVQ@201174|Actinobacteria,4CPC1@84995|Rubrobacteria 84995|Rubrobacteria S Alcohol dehydrogenase GroES-like domain - - 1.1.1.1 ko:K13953 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 - R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310 RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273 ko00000,ko00001,ko01000 - - - ADH_N WXD2_k127_1933647_5 1894.JOER01000010_gene2205 2.913e-63 224.0 COG1926@1|root,COG1926@2|Bacteria,2GJUU@201174|Actinobacteria 201174|Actinobacteria Q phosphoribosyltransferase - - - ko:K07100 - - - - ko00000 - - - DLH,Pribosyltran WXD2_k127_1933647_4 1173024.KI912148_gene3334 1.24e-85 298.0 COG2843@1|root,COG2843@2|Bacteria,1G20Q@1117|Cyanobacteria,1JJC3@1189|Stigonemataceae 1117|Cyanobacteria M Bacterial capsule synthesis protein PGA_cap - - - ko:K07282 - - - - ko00000 - - - PGA_cap WXD2_k127_1933647_6 1144275.COCOR_04390 2.63e-46 177.0 COG0398@1|root,COG0398@2|Bacteria,1N99S@1224|Proteobacteria 1224|Proteobacteria S SNARE associated Golgi protein - - - - - - - - - - - - SNARE_assoc WXD2_k127_1933647_7 760192.Halhy_1783 1.295e-43 168.0 2DI69@1|root,30258@2|Bacteria,4PJ1K@976|Bacteroidetes,1IZ7W@117747|Sphingobacteriia 976|Bacteroidetes - - - - - - - - - - - - - - - WXD2_k127_1933647_13 1150474.JQJI01000025_gene1664 7.755e-19 95.0 COG1394@1|root,COG1394@2|Bacteria,2GD6P@200918|Thermotogae 200918|Thermotogae C Produces ATP from ADP in the presence of a proton gradient across the membrane - - - ko:K02120 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002 3.A.2.2,3.A.2.3 - - ATP-synt_D WXD2_k127_1933647_1 903818.KI912268_gene1990 1.64e-152 500.0 COG1156@1|root,COG1156@2|Bacteria 2|Bacteria C Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit atpB - - ko:K02118 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002 3.A.2.2,3.A.2.3 - - ATP-synt_ab,ATP-synt_ab_N WXD2_k127_1933647_0 644281.MFS40622_0005 2.914e-173 566.0 COG1155@1|root,arCOG00868@2157|Archaea,2XT8I@28890|Euryarchaeota,23Q05@183939|Methanococci 183939|Methanococci C Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit atpA GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0034220,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044464,GO:0044769,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132,GO:1902600 3.6.3.14,3.6.3.15 ko:K02117 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002,ko01000 3.A.2.2,3.A.2.3 - - ATP-synt_ab,ATP-synt_ab_N,ATP-synt_ab_Xtn WXD2_k127_1933647_11 1232410.KI421413_gene550 1.643e-19 92.0 COG0636@1|root,COG0636@2|Bacteria,1NG0V@1224|Proteobacteria 1224|Proteobacteria C ATP synthase subunit C - - - ko:K02124 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002 3.A.2.2,3.A.2.3 - - ATP-synt_C WXD2_k127_1933647_3 1499967.BAYZ01000009_gene5286 1.584e-91 331.0 COG1269@1|root,COG1269@2|Bacteria 2|Bacteria C ATP hydrolysis coupled proton transport atpI - - ko:K02123 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002 3.A.2.2,3.A.2.3 - - V_ATPase_I WXD2_k127_1933647_10 266117.Rxyl_0937 1.842e-21 100.0 COG0517@1|root,COG0517@2|Bacteria,2GSAR@201174|Actinobacteria 201174|Actinobacteria S Cbs domain - - - ko:K04767 - - - - ko00000 - - - ACT,CBS WXD2_k127_1933647_8 742767.HMPREF9456_02741 7.153e-43 168.0 COG0428@1|root,COG0428@2|Bacteria,4NT7J@976|Bacteroidetes,2FWBB@200643|Bacteroidia,22ZZK@171551|Porphyromonadaceae 976|Bacteroidetes P ZIP Zinc transporter - - - - - - - - - - - - Zip WXD2_k127_1933647_9 661478.OP10G_4588 6.486e-30 124.0 COG2905@1|root,COG2905@2|Bacteria 2|Bacteria T signal-transduction protein containing cAMP-binding and CBS domains - - - ko:K07182 - - - - ko00000 - - - CBS,DUF294,DUF294_C,cNMP_binding WXD2_k127_1933647_12 1173026.Glo7428_2958 3.095e-19 93.0 2DM1K@1|root,31BCJ@2|Bacteria,1G6WG@1117|Cyanobacteria 1117|Cyanobacteria - - - - - - - - - - - - - - - WXD2_k127_193604_6 471852.Tcur_0419 6.062e-06 57.0 COG0515@1|root,COG2319@1|root,COG0515@2|Bacteria,COG2319@2|Bacteria,2GIV0@201174|Actinobacteria,4EMIQ@85012|Streptosporangiales 201174|Actinobacteria KLT PFAM Serine threonine protein kinase-related - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase,WD40 WXD2_k127_193604_1 234267.Acid_7013 1.531e-69 248.0 COG1559@1|root,COG1559@2|Bacteria,3Y2RD@57723|Acidobacteria 57723|Acidobacteria S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation mltG - - ko:K07082 - - - - ko00000 - - - YceG WXD2_k127_193604_5 411489.CLOL250_02906 9.873e-16 82.0 COG0816@1|root,COG0816@2|Bacteria,1V6ER@1239|Firmicutes,24JGP@186801|Clostridia,36IV4@31979|Clostridiaceae 186801|Clostridia J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA yrrK - - ko:K07447 - - - - ko00000,ko01000 - - - RuvX WXD2_k127_193604_0 204669.Acid345_0689 5.774e-138 448.0 COG2805@1|root,COG2805@2|Bacteria,3Y316@57723|Acidobacteria,2JIT4@204432|Acidobacteriia 204432|Acidobacteriia NU Type II/IV secretion system protein - - - ko:K02669 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - T2SSE WXD2_k127_193604_7 439235.Dalk_3300 7.295e-06 55.0 COG0784@1|root,COG0784@2|Bacteria,1RHWK@1224|Proteobacteria,42SCZ@68525|delta/epsilon subdivisions,2WPGH@28221|Deltaproteobacteria,2MK6H@213118|Desulfobacterales 28221|Deltaproteobacteria T zinc-ribbon domain - - - - - - - - - - - - zinc_ribbon_4 WXD2_k127_193604_4 1499967.BAYZ01000075_gene2072 5.315e-20 96.0 COG2165@1|root,COG2165@2|Bacteria,2NQ2Y@2323|unclassified Bacteria 2|Bacteria NU Prokaryotic N-terminal methylation motif pulG - - ko:K02456 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - N_methyl,T2SSG WXD2_k127_193604_2 247633.GP2143_09320 7.346e-45 189.0 COG0624@1|root,COG0624@2|Bacteria,1R40H@1224|Proteobacteria,1SMXB@1236|Gammaproteobacteria 1236|Gammaproteobacteria E Peptidase family M20/M25/M40 - - - - - - - - - - - - M20_dimer,Peptidase_M20,Peptidase_M28 WXD2_k127_193604_3 1128421.JAGA01000003_gene3091 9.234e-31 142.0 COG4485@1|root,COG4485@2|Bacteria,2NP78@2323|unclassified Bacteria 2|Bacteria S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - YfhO WXD2_k127_1955738_0 1174528.JH992898_gene2474 3.102e-188 604.0 COG0277@1|root,COG0277@2|Bacteria 2|Bacteria C FAD linked oxidase domain protein cho - - - - - - - - - - - Chol_subst-bind,FAD_binding_4 WXD2_k127_1955738_4 323098.Nwi_2280 4.492e-35 138.0 COG1073@1|root,COG1765@1|root,COG1073@2|Bacteria,COG1765@2|Bacteria,1N2BT@1224|Proteobacteria,2TQN7@28211|Alphaproteobacteria,3JQSS@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria O OsmC-like protein MA20_16590 - - ko:K06889,ko:K07397 - - - - ko00000 - - - Hydrolase_4,OsmC WXD2_k127_1955738_1 118163.Ple7327_1120 2.125e-156 501.0 COG0596@1|root,COG0596@2|Bacteria,1G21Y@1117|Cyanobacteria,3VI18@52604|Pleurocapsales 1117|Cyanobacteria S Belongs to the peptidase S33 family pip - 3.4.11.5 ko:K01259 ko00330,map00330 - R00135 - ko00000,ko00001,ko01000,ko01002 - - - Abhydrolase_1 WXD2_k127_1955738_6 1173021.ALWA01000031_gene2785 1.232e-19 99.0 COG0420@1|root,COG0420@2|Bacteria,1FZXM@1117|Cyanobacteria 1117|Cyanobacteria L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity sbcD - - ko:K03547 - - - - ko00000,ko03400 - - - Metallophos WXD2_k127_1955738_5 391612.CY0110_28224 2.499e-22 102.0 2DBIE@1|root,32TXH@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_1955738_3 1242864.D187_000900 3.474e-94 321.0 COG0526@1|root,COG0526@2|Bacteria,1NH1D@1224|Proteobacteria,42XJ2@68525|delta/epsilon subdivisions,2X5GC@28221|Deltaproteobacteria,2YUZX@29|Myxococcales 28221|Deltaproteobacteria CO Thioredoxin-like - - - - - - - - - - - - Thioredoxin_7 WXD2_k127_1955738_8 483219.LILAB_12015 1.901e-07 54.0 COG0526@1|root,COG0526@2|Bacteria,1NH1D@1224|Proteobacteria,42XJ2@68525|delta/epsilon subdivisions,2X5GC@28221|Deltaproteobacteria,2YUZX@29|Myxococcales 28221|Deltaproteobacteria CO Thioredoxin-like - - - - - - - - - - - - Thioredoxin_7 WXD2_k127_1955738_2 1340493.JNIF01000003_gene2701 5.32e-118 386.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,3Y3IB@57723|Acidobacteria 2|Bacteria EU Prolyl oligopeptidase family - - - - - - - - - - - - PD40,Peptidase_S9 WXD2_k127_1955738_7 311402.Avi_3825 1.168e-14 78.0 COG2200@1|root,COG2200@2|Bacteria,1MVJY@1224|Proteobacteria,2U0GM@28211|Alphaproteobacteria,4BCWT@82115|Rhizobiaceae 28211|Alphaproteobacteria T Putative diguanylate phosphodiesterase - - - - - - - - - - - - EAL WXD2_k127_196364_0 903818.KI912268_gene2181 1.708e-76 289.0 COG1629@1|root,COG4771@2|Bacteria 2|Bacteria P TonB-dependent receptor - - - - - - - - - - - - CarboxypepD_reg,Plug,TonB_dep_Rec WXD2_k127_1967423_1 861299.J421_0915 3.132e-108 366.0 COG0612@1|root,COG0612@2|Bacteria,1ZT9J@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Insulinase (Peptidase family M16) - - - - - - - - - - - - Peptidase_M16,Peptidase_M16_C WXD2_k127_1967423_0 880073.Calab_1230 7.01e-133 435.0 COG0612@1|root,COG0612@2|Bacteria,2NP50@2323|unclassified Bacteria 2|Bacteria S Insulinase (Peptidase family M16) - - - ko:K07263 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M16,Peptidase_M16_C WXD2_k127_1967423_4 671143.DAMO_2311 1.518e-68 239.0 COG1428@1|root,COG1428@2|Bacteria,2NPEH@2323|unclassified Bacteria 2|Bacteria F Deoxynucleoside kinase dgk - 2.7.1.113 ko:K15518 ko00230,map00230 - R01967 RC00002,RC00017 ko00000,ko00001,ko01000 - - - HPPK,dNK WXD2_k127_1967423_2 643648.Slip_0136 7.5e-98 329.0 COG0413@1|root,COG0413@2|Bacteria,1TPZA@1239|Firmicutes,248RR@186801|Clostridia,42JSG@68298|Syntrophomonadaceae 186801|Clostridia H Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate panB - 2.1.2.11 ko:K00606 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R01226 RC00022,RC00200 ko00000,ko00001,ko00002,ko01000 - - - Pantoate_transf WXD2_k127_1967423_3 316274.Haur_3460 4.928e-88 299.0 COG0414@1|root,COG0414@2|Bacteria,2G64N@200795|Chloroflexi,374TX@32061|Chloroflexia 32061|Chloroflexia H Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate panC GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 ko:K01918 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 M00119 R02473 RC00096,RC00141 ko00000,ko00001,ko00002,ko01000 - - - Pantoate_ligase WXD2_k127_1967423_5 941449.dsx2_2029 4.126e-10 68.0 COG0853@1|root,COG0853@2|Bacteria,1RI1B@1224|Proteobacteria,42SBM@68525|delta/epsilon subdivisions,2WQ24@28221|Deltaproteobacteria,2MCHG@213115|Desulfovibrionales 28221|Deltaproteobacteria H Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine panD - 4.1.1.11 ko:K01579 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 M00119 R00489 RC00299 ko00000,ko00001,ko00002,ko01000 - - - Asp_decarbox WXD2_k127_1970602_0 1121920.AUAU01000004_gene813 1.266e-182 597.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,3Y3V0@57723|Acidobacteria 57723|Acidobacteria EU peptidase S9B dipeptidylpeptidase IV domain protein - - 3.4.14.5 ko:K01278 ko04974,map04974 - - - ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 - - - DPPIV_N,Peptidase_S9 WXD2_k127_1970602_1 385682.AFSL01000053_gene496 3.999e-129 424.0 COG0436@1|root,COG0436@2|Bacteria,4NG6G@976|Bacteroidetes,2FN1B@200643|Bacteroidia,3XJVE@558415|Marinilabiliaceae 976|Bacteroidetes E Aminotransferase class I and II aspC - 2.6.1.1,2.6.1.2,2.6.1.66 ko:K00812,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 - R00258,R00355,R00694,R00734,R00896,R01215,R02433,R02619,R05052 RC00006,RC00008,RC00036 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 WXD2_k127_1970602_2 1267534.KB906755_gene4826 2.356e-118 393.0 COG1181@1|root,COG1181@2|Bacteria,3Y6Z0@57723|Acidobacteria,2JKPX@204432|Acidobacteriia 204432|Acidobacteriia M ATP-grasp domain - - 6.3.2.4 ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 - R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Dala_Dala_lig_C WXD2_k127_1970602_3 1267533.KB906738_gene2098 1.259e-117 388.0 COG4307@1|root,COG4307@2|Bacteria,3Y69G@57723|Acidobacteria,2JM0B@204432|Acidobacteriia 204432|Acidobacteriia S Putative zinc-binding metallo-peptidase - - - - - - - - - - - - Peptidase_Mx WXD2_k127_1970602_8 502025.Hoch_6859 1.885e-54 194.0 COG2947@1|root,COG2947@2|Bacteria,1RHRU@1224|Proteobacteria,42SRT@68525|delta/epsilon subdivisions,2WPB8@28221|Deltaproteobacteria,2YV8N@29|Myxococcales 28221|Deltaproteobacteria S EVE domain - - - - - - - - - - - - EVE WXD2_k127_1970602_12 383372.Rcas_3309 7.344e-06 53.0 COG5001@1|root,COG5001@2|Bacteria,2G7UT@200795|Chloroflexi,3762V@32061|Chloroflexia 32061|Chloroflexia T PFAM GGDEF domain containing protein - - - - - - - - - - - - EAL,GGDEF,PAS_3,PAS_4,Response_reg WXD2_k127_1970602_7 1434325.AZQN01000003_gene2247 2.042e-74 277.0 COG1409@1|root,COG2374@1|root,COG5492@1|root,COG1409@2|Bacteria,COG2374@2|Bacteria,COG5492@2|Bacteria,4NHMV@976|Bacteroidetes,47UBQ@768503|Cytophagia 976|Bacteroidetes N Polysaccharide lyase family 8, N terminal alpha-helical domain cslA - 4.2.2.5 ko:K19049 - - - - ko00000,ko01000 - PL8 - DUF1573,Lyase_8,Lyase_8_C,Lyase_8_N WXD2_k127_1970602_10 398767.Glov_3186 8.075e-25 106.0 COG1278@1|root,COG1278@2|Bacteria,1N6Q5@1224|Proteobacteria,42V0K@68525|delta/epsilon subdivisions,2WQ3M@28221|Deltaproteobacteria 28221|Deltaproteobacteria K cold-shock protein cspD - - ko:K03704 - - - - ko00000,ko03000 - - - CSD WXD2_k127_1970602_11 319224.Sputcn32_3430 8.016e-15 87.0 COG0526@1|root,COG0526@2|Bacteria,1NAHI@1224|Proteobacteria,1SCND@1236|Gammaproteobacteria,2QB1H@267890|Shewanellaceae 1236|Gammaproteobacteria CO Thioredoxin - - - - - - - - - - - - Thioredoxin,Thioredoxin_9 WXD2_k127_1970602_6 502025.Hoch_2465 5.833e-75 280.0 COG0177@1|root,COG0177@2|Bacteria,1MUYQ@1224|Proteobacteria,42N6I@68525|delta/epsilon subdivisions,2WK7S@28221|Deltaproteobacteria,2YZ69@29|Myxococcales 28221|Deltaproteobacteria L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate nth - 4.2.99.18 ko:K10773 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - EndIII_4Fe-2S,HhH-GPD WXD2_k127_1970602_9 1150626.PHAMO_270305 9.594e-38 148.0 COG0824@1|root,COG0824@2|Bacteria,1RCSP@1224|Proteobacteria,2U6RM@28211|Alphaproteobacteria,2JT08@204441|Rhodospirillales 204441|Rhodospirillales S Thioesterase-like superfamily - - - - - - - - - - - - 4HBT_2 WXD2_k127_1970602_5 671143.DAMO_0263 1.302e-86 302.0 COG0438@1|root,COG0438@2|Bacteria,2NP1P@2323|unclassified Bacteria 2|Bacteria M Glycosyltransferase Family 4 wcnD - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 WXD2_k127_1970602_4 1499967.BAYZ01000017_gene6221 1.312e-110 373.0 COG2148@1|root,COG2148@2|Bacteria,2NP0Q@2323|unclassified Bacteria 2|Bacteria M Bacterial sugar transferase wcaJ - - ko:K03606 ko05111,map05111 - - - ko00000,ko00001 - - - Bac_transf,CoA_binding_3 WXD2_k127_1971298_7 913865.DOT_3503 2.913e-09 62.0 COG0304@1|root,COG0304@2|Bacteria,1TPA7@1239|Firmicutes,247VF@186801|Clostridia,2602N@186807|Peptococcaceae 186801|Clostridia I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP fabF - 2.3.1.179 ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119 RC00039,RC02728,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Ketoacyl-synt_C,ketoacyl-synt WXD2_k127_1971298_8 720555.BATR1942_16105 4.244e-06 53.0 COG0764@1|root,COG0764@2|Bacteria,1V6EX@1239|Firmicutes,4HGX1@91061|Bacilli,1ZFJ9@1386|Bacillus 91061|Bacilli I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs fabZ - 4.2.1.59 ko:K02372 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04428,R04535,R04537,R04544,R04568,R04954,R04965,R07764,R10117,R10121 RC00831,RC01095 ko00000,ko00001,ko00002,ko01000,ko01004 - - - FabA WXD2_k127_1971298_6 1121918.ARWE01000001_gene3128 7.567e-18 91.0 COG0236@1|root,COG0236@2|Bacteria,1N6RU@1224|Proteobacteria,42V26@68525|delta/epsilon subdivisions,2WQ0Y@28221|Deltaproteobacteria 28221|Deltaproteobacteria IQ Phosphopantetheine attachment site acpP-1 - - ko:K02078 - - - - ko00000,ko00001 - - - PP-binding WXD2_k127_1971298_2 497964.CfE428DRAFT_0942 2.197e-91 315.0 COG0644@1|root,COG0644@2|Bacteria,46SNH@74201|Verrucomicrobia 74201|Verrucomicrobia C Tryptophan halogenase - - - - - - - - - - - - Trp_halogenase WXD2_k127_1971298_4 497964.CfE428DRAFT_1495 4.506e-57 218.0 COG0318@1|root,COG0318@2|Bacteria,46T7I@74201|Verrucomicrobia 74201|Verrucomicrobia IQ AMP-binding enzyme - - - - - - - - - - - - AMP-binding,AMP-binding_C WXD2_k127_1971298_0 497964.CfE428DRAFT_0927 3.072e-105 360.0 COG0644@1|root,COG0644@2|Bacteria,46TJ0@74201|Verrucomicrobia 74201|Verrucomicrobia C Tryptophan halogenase - - - - - - - - - - - - Trp_halogenase WXD2_k127_1971298_3 671143.DAMO_3038 1.104e-73 254.0 COG0586@1|root,COG0586@2|Bacteria,2NQ0I@2323|unclassified Bacteria 2|Bacteria S SNARE associated Golgi protein dedA - 3.6.1.27 ko:K03975,ko:K19302 ko00550,map00550 - R05627 RC00002 ko00000,ko00001,ko01000,ko01011 - - - SNARE_assoc WXD2_k127_1971298_1 502025.Hoch_4718 1.049e-99 334.0 COG0345@1|root,COG0345@2|Bacteria,1R5J1@1224|Proteobacteria,42P7F@68525|delta/epsilon subdivisions,2WJW9@28221|Deltaproteobacteria,2YTWD@29|Myxococcales 28221|Deltaproteobacteria E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline proC - 1.5.1.2 ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 M00015 R01248,R01251,R03291,R03293 RC00054,RC00083 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_0899 F420_oxidored,P5CR_dimer WXD2_k127_1975715_1 1499967.BAYZ01000145_gene6209 7.913e-112 368.0 COG0702@1|root,COG0702@2|Bacteria 2|Bacteria GM epimerase - - - - - - - - - - - - NmrA WXD2_k127_1975715_2 290397.Adeh_2967 2.424e-55 201.0 COG2010@1|root,COG2010@2|Bacteria,1RBTK@1224|Proteobacteria,43AHK@68525|delta/epsilon subdivisions,2X5XT@28221|Deltaproteobacteria,2YVZ8@29|Myxococcales 28221|Deltaproteobacteria C Cytochrome c - - - - - - - - - - - - - WXD2_k127_1975715_0 33876.JNXY01000009_gene8908 2.122e-124 431.0 COG3629@1|root,COG3903@1|root,COG3629@2|Bacteria,COG3903@2|Bacteria,2GIZ1@201174|Actinobacteria,4DH3V@85008|Micromonosporales 201174|Actinobacteria KT Transcriptional regulator - GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - - - - - - - - - - GerE,Guanylate_cyc,NB-ARC WXD2_k127_1979300_2 313596.RB2501_12022 3.383e-25 123.0 COG0823@1|root,COG0823@2|Bacteria,4NG4S@976|Bacteroidetes,1I1I2@117743|Flavobacteriia 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - ko:K03641 - - - - ko00000,ko02000 2.C.1.2 - - PD40 WXD2_k127_1979300_4 1033734.CAET01000028_gene4521 6.927e-24 114.0 2DBJ5@1|root,2Z9IG@2|Bacteria,1VIXW@1239|Firmicutes,4HPR1@91061|Bacilli,1ZB1A@1386|Bacillus 91061|Bacilli - - - - - - - - - - - - - - - WXD2_k127_1979300_0 861299.J421_1936 9.948e-243 765.0 COG3158@1|root,COG3158@2|Bacteria,1ZTCK@142182|Gemmatimonadetes 2|Bacteria P Transport of potassium into the cell kup - - ko:K03549 - - - - ko00000,ko02000 2.A.72 - - K_trans WXD2_k127_1979300_3 1081640.AGFU01000042_gene3190 5.567e-25 117.0 COG0642@1|root,COG2205@2|Bacteria,1MUZQ@1224|Proteobacteria,2TSS7@28211|Alphaproteobacteria,2K1GW@204457|Sphingomonadales 204457|Sphingomonadales T Osmosensitive K channel kdpD - 2.7.13.3 ko:K07646 ko02020,map02020 M00454 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - DUF4118,GAF_3,HATPase_c,HisKA,KdpD,Usp WXD2_k127_1979300_1 2045.KR76_23670 4.353e-55 214.0 COG0745@1|root,COG0745@2|Bacteria,2GJ2N@201174|Actinobacteria,4DNTM@85009|Propionibacteriales 201174|Actinobacteria T Transcriptional regulatory protein, C terminal kdpE - - ko:K02483,ko:K07667 ko02020,ko02024,map02020,map02024 M00454 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C WXD2_k127_1979300_5 479431.Namu_2014 1.164e-06 51.0 COG2197@1|root,COG2197@2|Bacteria,2IG2E@201174|Actinobacteria,4EVZB@85013|Frankiales 201174|Actinobacteria K Two component transcriptional regulator, LuxR family - - - - - - - - - - - - GerE,Response_reg WXD2_k127_1981829_4 682795.AciX8_4327 0.0009606 50.0 COG2304@1|root,COG2304@2|Bacteria,3Y3DR@57723|Acidobacteria,2JHJT@204432|Acidobacteriia 204432|Acidobacteriia S TIGRFAM VWFA-related Acidobacterial domain - - - - - - - - - - - - - WXD2_k127_1981829_1 44251.PDUR_09885 1.21e-36 156.0 COG5002@1|root,COG5002@2|Bacteria,1TQ1H@1239|Firmicutes,4HB1B@91061|Bacilli,26T15@186822|Paenibacillaceae 91061|Bacilli T Histidine kinase phoR - 2.7.13.3 ko:K07636 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HAMP,HATPase_c,HisKA,PAS,PAS_4,PAS_9,sCache_like WXD2_k127_1981829_0 204669.Acid345_4231 1.212e-163 548.0 COG5009@1|root,COG5009@2|Bacteria,3Y31C@57723|Acidobacteria,2JHJY@204432|Acidobacteriia 204432|Acidobacteriia M Penicillin-binding protein 1A - - 2.4.1.129,3.4.16.4 ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 - - - ko00000,ko00001,ko01000,ko01003,ko01011 - GT51 - Transgly,Transpeptidase WXD2_k127_1981829_3 754476.Q7A_36 9.416e-14 76.0 COG0745@1|root,COG0745@2|Bacteria,1RDYB@1224|Proteobacteria,1S4CZ@1236|Gammaproteobacteria,462JI@72273|Thiotrichales 72273|Thiotrichales KT PFAM Response regulator receiver domain - - - ko:K02657 ko02020,ko02025,map02020,map02025 M00507 - - ko00000,ko00001,ko00002,ko02022,ko02035,ko02044 - - - Response_reg WXD2_k127_1981829_2 1250232.JQNJ01000001_gene237 7.204e-25 111.0 COG0556@1|root,COG0556@2|Bacteria,4NE6E@976|Bacteroidetes,1HXV3@117743|Flavobacteriia 976|Bacteroidetes L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage uvrB - - ko:K03702 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - Helicase_C,ResIII,UVR,UvrB WXD2_k127_1995205_2 525897.Dbac_2239 3.499e-07 57.0 2EJ4X@1|root,33CW5@2|Bacteria,1NITR@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - WXD2_k127_1995205_0 1266925.JHVX01000004_gene1168 6.517e-184 595.0 COG0467@1|root,COG0467@2|Bacteria,1NEWW@1224|Proteobacteria,2VIKV@28216|Betaproteobacteria,37413@32003|Nitrosomonadales 28216|Betaproteobacteria T KaiC - - - ko:K08482 - - - - ko00000 - - - ATPase WXD2_k127_1995205_1 240292.Ava_3819 1.884e-62 232.0 COG0642@1|root,COG0784@1|root,COG2202@1|root,COG3829@1|root,COG0784@2|Bacteria,COG2202@2|Bacteria,COG2205@2|Bacteria,COG3829@2|Bacteria,1G09B@1117|Cyanobacteria,1HIN7@1161|Nostocales 1117|Cyanobacteria T response regulator, receiver - - - - - - - - - - - - DUF4118,HATPase_c,HisKA,PAS_3,PAS_4,PAS_9,Response_reg WXD2_k127_2007801_7 401053.AciPR4_2542 3.396e-29 131.0 COG1538@1|root,COG1538@2|Bacteria,3Y3BF@57723|Acidobacteria,2JIVR@204432|Acidobacteriia 204432|Acidobacteriia MU outer membrane efflux protein - - - - - - - - - - - - OEP WXD2_k127_2007801_6 671143.DAMO_2133 3.493e-41 167.0 COG0845@1|root,COG0845@2|Bacteria,2NPNY@2323|unclassified Bacteria 2|Bacteria M Barrel-sandwich domain of CusB or HlyD membrane-fusion ybhG GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0042221,GO:0044464,GO:0046677,GO:0050896,GO:0071944 - ko:K01993 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 WXD2_k127_2007801_2 457415.HMPREF1006_02024 2.059e-68 242.0 COG1131@1|root,COG1131@2|Bacteria,3TAVU@508458|Synergistetes 508458|Synergistetes V AAA domain, putative AbiEii toxin, Type IV TA system - - - - - - - - - - - - ABC_tran WXD2_k127_2007801_3 1122971.BAME01000092_gene5629 2.319e-67 241.0 COG1129@1|root,COG1129@2|Bacteria,4PKVD@976|Bacteroidetes,2FM9B@200643|Bacteroidia,22WJ7@171551|Porphyromonadaceae 976|Bacteroidetes G AAA domain, putative AbiEii toxin, Type IV TA system - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran WXD2_k127_2007801_1 1121422.AUMW01000009_gene3314 3.94e-93 317.0 COG0842@1|root,COG0842@2|Bacteria,1TQG7@1239|Firmicutes,249TT@186801|Clostridia,261AQ@186807|Peptococcaceae 186801|Clostridia U PFAM ABC-2 type transporter - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 WXD2_k127_2007801_10 446470.Snas_2827 9.447e-10 65.0 COG1309@1|root,COG1309@2|Bacteria,2HZ2F@201174|Actinobacteria,4EZUA@85014|Glycomycetales 201174|Actinobacteria K Bacterial regulatory proteins, tetR family - - - - - - - - - - - - TetR_N WXD2_k127_2007801_9 1041159.AZUW01000018_gene783 6.319e-22 110.0 2DM0H@1|root,316A1@2|Bacteria,1N0X9@1224|Proteobacteria,2UEZ8@28211|Alphaproteobacteria 28211|Alphaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_2007801_8 1123399.AQVE01000001_gene736 2.051e-28 126.0 2DQHJ@1|root,336X1@2|Bacteria,1QYDU@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - WXD2_k127_2007801_5 1279009.ADICEAN_03736 1.109e-59 236.0 COG3506@1|root,COG3506@2|Bacteria 2|Bacteria M Protein of unknown function (DUF1349) - - 1.16.3.3 ko:K22350 - - - - ko00000,ko01000 - - - DUF1349,PI-PLC-C1,fn3 WXD2_k127_2007801_0 1242864.D187_000057 5.048e-272 876.0 COG2183@1|root,COG2183@2|Bacteria,1MUA7@1224|Proteobacteria,42M9U@68525|delta/epsilon subdivisions,2WJ4X@28221|Deltaproteobacteria,2YUNF@29|Myxococcales 28221|Deltaproteobacteria K Tex-like protein N-terminal domain tex - - ko:K06959 - - - - ko00000 - - - HHH_3,S1,Tex_N,Tex_YqgF WXD2_k127_2007801_4 1209072.ALBT01000053_gene467 8.053e-62 243.0 COG1404@1|root,COG1404@2|Bacteria,1MU3S@1224|Proteobacteria,1RNB8@1236|Gammaproteobacteria,1FHR7@10|Cellvibrio 1236|Gammaproteobacteria O Subtilase family - - - - - - - - - - - - Inhibitor_I9,Peptidase_S8,SLH WXD2_k127_2007801_11 1267535.KB906767_gene688 8.81e-09 60.0 2EVWN@1|root,33PAB@2|Bacteria,3Y5UR@57723|Acidobacteria 57723|Acidobacteria - - - - - - - - - - - - - - - WXD2_k127_2008328_1 861299.J421_5781 1.243e-40 165.0 COG3595@1|root,COG3595@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - DUF4097 WXD2_k127_2008328_2 861299.J421_0091 6.589e-25 113.0 28XFN@1|root,2ZJD7@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_2008328_0 1123073.KB899242_gene1457 4.205e-55 202.0 COG0500@1|root,COG0500@2|Bacteria,1R947@1224|Proteobacteria,1SUF1@1236|Gammaproteobacteria,1X4RG@135614|Xanthomonadales 135614|Xanthomonadales Q Methyltransferase - - - - - - - - - - - - Methyltransf_12,Methyltransf_23,Methyltransf_25 WXD2_k127_2008328_3 861299.J421_0270 1.783e-14 79.0 COG0791@1|root,COG0791@2|Bacteria 2|Bacteria M cysteine-type peptidase activity - - - ko:K19224,ko:K21471 - - - - ko00000,ko01000,ko01002,ko01011 - CBM50 - LysM,NLPC_P60 WXD2_k127_2008328_4 861299.J421_0270 3.047e-12 70.0 COG0791@1|root,COG0791@2|Bacteria 2|Bacteria M cysteine-type peptidase activity - - - ko:K19224,ko:K21471 - - - - ko00000,ko01000,ko01002,ko01011 - CBM50 - LysM,NLPC_P60 WXD2_k127_2014184_1 234267.Acid_7639 6.222e-167 536.0 COG3344@1|root,COG3344@2|Bacteria,3Y46K@57723|Acidobacteria 57723|Acidobacteria L PFAM RNA-directed DNA polymerase (Reverse transcriptase) - - 2.7.7.49 ko:K00986 - - - - ko00000,ko01000 - - - GIIM,RVT_1,RVT_N WXD2_k127_2014184_3 1131269.AQVV01000001_gene1450 3.006e-42 169.0 COG1073@1|root,COG1073@2|Bacteria 2|Bacteria S thiolester hydrolase activity mhpC - - ko:K06889 - - - - ko00000 - - - Hydrolase_4 WXD2_k127_2014184_0 1279009.ADICEAN_03089 1.932e-200 634.0 COG0612@1|root,COG0612@2|Bacteria,4NE0K@976|Bacteroidetes,47TKT@768503|Cytophagia 976|Bacteroidetes S Insulinase (Peptidase family M16) - - - - - - - - - - - - Peptidase_M16,Peptidase_M16_C WXD2_k127_2014184_2 861299.J421_0763 8.531e-151 490.0 COG0612@1|root,COG0612@2|Bacteria 2|Bacteria L Peptidase, M16 - - - - - - - - - - - - Peptidase_M16,Peptidase_M16_C WXD2_k127_2028647_0 338966.Ppro_3515 1.476e-86 289.0 COG0178@1|root,COG0178@2|Bacteria,1MW0W@1224|Proteobacteria,42M4I@68525|delta/epsilon subdivisions,2WJHM@28221|Deltaproteobacteria,43U3R@69541|Desulfuromonadales 28221|Deltaproteobacteria L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate uvrA - - ko:K03701 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - ABC_tran WXD2_k127_2028647_1 357808.RoseRS_4060 5.34e-11 76.0 COG4485@1|root,COG4485@2|Bacteria,2G75F@200795|Chloroflexi,3771H@32061|Chloroflexia 32061|Chloroflexia S Bacterial membrane protein YfhO - - - - - - - - - - - - YfhO WXD2_k127_20301_2 246197.MXAN_5556 5.84e-149 477.0 COG5557@1|root,COG5557@2|Bacteria,1PFX4@1224|Proteobacteria,42PIE@68525|delta/epsilon subdivisions,2WM3C@28221|Deltaproteobacteria,2YU0I@29|Myxococcales 28221|Deltaproteobacteria C Polysulphide reductase, NrfD actC - - ko:K00185 - - - - ko00000 5.A.3 - - DUF3341,NrfD WXD2_k127_20301_0 1121920.AUAU01000008_gene1614 3.497e-246 790.0 COG0437@1|root,COG0437@2|Bacteria,3Y2Z0@57723|Acidobacteria 2|Bacteria C 4Fe-4S dicluster domain actB - - ko:K00184 - - - - ko00000 5.A.3 - - Fer4_7,Molybdop_Fe4S4,Molydop_binding WXD2_k127_20301_4 1121920.AUAU01000008_gene1615 6.275e-47 176.0 COG3303@1|root,COG3303@2|Bacteria,3Y9EA@57723|Acidobacteria 57723|Acidobacteria P Cytochrome c7 and related cytochrome c - - - - - - - - - - - - Cytochrome_C7 WXD2_k127_20301_3 1121920.AUAU01000008_gene1616 6.113e-58 218.0 COG2181@1|root,COG2181@2|Bacteria 2|Bacteria C nitrate reductase activity narI GO:0001666,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006950,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009628,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0036293,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0046906,GO:0048037,GO:0050896,GO:0055114,GO:0070469,GO:0070470,GO:0070482,GO:0071944,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901363,GO:1902494,GO:1990204 1.7.5.1 ko:K00370,ko:K00374,ko:K02575 ko00910,ko01120,ko02020,map00910,map01120,map02020 M00529,M00530,M00615,M00804 R00798,R01106,R09497 RC02812 ko00000,ko00001,ko00002,ko01000,ko02000 2.A.1.8,5.A.3.1 - iEC042_1314.EC042_1594,iECABU_c1320.ECABU_c17020,iECUMN_1333.ECUMN_1718,iNJ661.Rv1164,iSF_1195.SF1230,ic_1306.c1897 Nitrate_red_gam WXD2_k127_20301_5 670487.Ocepr_1423 1.183e-15 91.0 COG2180@1|root,COG2180@2|Bacteria,1WJDZ@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus C PFAM Nitrate reductase delta subunit - - - ko:K00373 ko02020,map02020 - - - ko00000,ko00001 - - - Nitrate_red_del WXD2_k127_20301_1 1121920.AUAU01000008_gene1618 2.718e-212 668.0 COG1140@1|root,COG1140@2|Bacteria 2|Bacteria C nitrate reductase beta subunit narH GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006091,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009898,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0031235,GO:0032991,GO:0033554,GO:0042126,GO:0043436,GO:0044237,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0048037,GO:0050896,GO:0051536,GO:0051538,GO:0051539,GO:0051540,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204,GO:2001057 1.7.5.1 ko:K00371 ko00910,ko01120,ko02020,map00910,map01120,map02020 M00529,M00530,M00804 R00798,R01106,R09497 RC02812 ko00000,ko00001,ko00002,ko01000 5.A.3.1 - iAF987.Gmet_1021,iEcE24377_1341.EcE24377A_1376,iEcolC_1368.EcolC_2189 Fer4_11,Nitr_red_bet_C WXD2_k127_2037588_11 68170.KL590493_gene6297 6.97e-06 56.0 COG0367@1|root,COG0367@2|Bacteria,2GJIM@201174|Actinobacteria,4E29V@85010|Pseudonocardiales 201174|Actinobacteria E Asparagine synthase - - 6.3.5.4 ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 - R00578 RC00010 ko00000,ko00001,ko01000,ko01002 - - - Asn_synthase,GATase_7 WXD2_k127_2037588_10 1170562.Cal6303_0849 2.46e-06 60.0 2BN1K@1|root,32GMS@2|Bacteria,1GKE8@1117|Cyanobacteria,1HT1Y@1161|Nostocales 1117|Cyanobacteria S Transglutaminase-like superfamily - - - - - - - - - - - - Transglut_core3 WXD2_k127_2037588_6 2340.JV46_19280 5.259e-32 138.0 2C8KX@1|root,32RMF@2|Bacteria,1N68G@1224|Proteobacteria,1SDSS@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Uncharacterised nucleotidyltransferase - - - - - - - - - - - - NTP_transf_5 WXD2_k127_2037588_7 518766.Rmar_1898 4.464e-26 117.0 COG0526@1|root,COG0526@2|Bacteria,4PIEG@976|Bacteroidetes,1FK6M@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes CO Thioredoxin-like - - - - - - - - - - - - AhpC-TSA WXD2_k127_2037588_5 204669.Acid345_4539 3.081e-40 159.0 COG1825@1|root,COG1825@2|Bacteria,3Y41C@57723|Acidobacteria,2JHW5@204432|Acidobacteriia 204432|Acidobacteriia J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance ctc - - ko:K02897 ko03010,map03010 M00178 - - ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L25p,Ribosomal_TL5_C WXD2_k127_2037588_2 330214.NIDE0781 1.339e-121 397.0 COG0462@1|root,COG0462@2|Bacteria,3J0D0@40117|Nitrospirae 40117|Nitrospirae F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) prs - 2.7.6.1 ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 M00005 R01049 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - Pribosyl_synth,Pribosyltran_N WXD2_k127_2037588_8 682795.AciX8_3035 1.369e-12 79.0 COG4219@1|root,COG4219@2|Bacteria,3Y301@57723|Acidobacteria,2JIG4@204432|Acidobacteriia 204432|Acidobacteriia KT Peptidase M56 - - - - - - - - - - - - - WXD2_k127_2037588_3 861299.J421_2108 7.27e-81 284.0 COG0628@1|root,COG0628@2|Bacteria,1ZSY6@142182|Gemmatimonadetes 142182|Gemmatimonadetes S AI-2E family transporter - - - - - - - - - - - - AI-2E_transport WXD2_k127_2037588_9 1043493.BBLU01000014_gene1319 9.149e-08 65.0 COG4454@1|root,COG4454@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - Copper-bind,Cupredoxin_1 WXD2_k127_2037588_1 857087.Metme_0968 1.956e-143 471.0 COG1858@1|root,COG1858@2|Bacteria,1MV70@1224|Proteobacteria,1RPPQ@1236|Gammaproteobacteria,1XERF@135618|Methylococcales 135618|Methylococcales C PFAM Di-haem cytochrome c peroxidase - - 1.11.1.5 ko:K00428 - - - - ko00000,ko01000 - - - CCP_MauG,Cytochrom_C WXD2_k127_2037588_0 697282.Mettu_2032 4.877e-180 586.0 COG1409@1|root,COG1409@2|Bacteria,1MUQJ@1224|Proteobacteria,1S12Q@1236|Gammaproteobacteria,1XEF7@135618|Methylococcales 135618|Methylococcales S Calcineurin-like phosphoesterase superfamily domain - - - - - - - - - - - - Metallophos WXD2_k127_2037588_4 697282.Mettu_2031 4.911e-51 192.0 COG3258@1|root,COG3258@2|Bacteria,1N1U2@1224|Proteobacteria,1SD42@1236|Gammaproteobacteria,1XFNF@135618|Methylococcales 135618|Methylococcales C Cytochrome c - - - - - - - - - - - - - WXD2_k127_2051122_14 269796.Rru_A2249 0.0006317 43.0 COG2008@1|root,COG2008@2|Bacteria,1MWCR@1224|Proteobacteria,2TSUA@28211|Alphaproteobacteria,2JP8H@204441|Rhodospirillales 204441|Rhodospirillales E Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde ltaE - 4.1.2.48 ko:K01620 ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230 - R00751,R06171 RC00312,RC00372 ko00000,ko00001,ko01000 - - - Beta_elim_lyase WXD2_k127_2051122_7 404589.Anae109_4379 9.921e-80 280.0 COG0820@1|root,COG0820@2|Bacteria,1MUYK@1224|Proteobacteria,42N69@68525|delta/epsilon subdivisions,2WIUJ@28221|Deltaproteobacteria,2YWPQ@29|Myxococcales 28221|Deltaproteobacteria J Belongs to the radical SAM superfamily. RlmN family - - 2.1.1.192 ko:K06941 - - - - ko00000,ko01000,ko03009 - - - Radical_SAM WXD2_k127_2051122_0 391008.Smal_1225 7.005e-158 522.0 COG0513@1|root,COG0513@2|Bacteria,1MU49@1224|Proteobacteria,1RMWA@1236|Gammaproteobacteria,1X334@135614|Xanthomonadales 135614|Xanthomonadales JKL DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation deaD - 3.6.4.13 ko:K05592 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03009,ko03019 - - - DEAD,DbpA,Helicase_C WXD2_k127_2051122_6 33876.JNXY01000009_gene8908 5.123e-89 325.0 COG3629@1|root,COG3903@1|root,COG3629@2|Bacteria,COG3903@2|Bacteria,2GIZ1@201174|Actinobacteria,4DH3V@85008|Micromonosporales 201174|Actinobacteria KT Transcriptional regulator - GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - - - - - - - - - - GerE,Guanylate_cyc,NB-ARC WXD2_k127_2051122_5 1095769.CAHF01000006_gene1870 2.349e-91 308.0 2DB86@1|root,2Z7QD@2|Bacteria,1MX4S@1224|Proteobacteria,2VKPI@28216|Betaproteobacteria 28216|Betaproteobacteria S Nucleotidyl transferase of unknown function (DUF2204) - - - - - - - - - - - - NTP_transf_5 WXD2_k127_2051122_10 319795.Dgeo_1422 1.048e-37 145.0 COG0853@1|root,COG0853@2|Bacteria,1WJY0@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus H Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine panD - 4.1.1.11 ko:K01579 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 M00119 R00489 RC00299 ko00000,ko00001,ko00002,ko01000 - - - Asp_decarbox WXD2_k127_2051122_12 1094980.Mpsy_2844 2.091e-28 124.0 arCOG03338@1|root,arCOG03338@2157|Archaea,2XXKV@28890|Euryarchaeota,2NA0P@224756|Methanomicrobia 224756|Methanomicrobia - - - - - - - - - - - - - - - WXD2_k127_2051122_1 1121123.AUAO01000003_gene2394 5.249e-145 474.0 COG2355@1|root,COG2355@2|Bacteria,1MWEW@1224|Proteobacteria,2TR5C@28211|Alphaproteobacteria,2KIF5@204458|Caulobacterales 204458|Caulobacterales E Membrane dipeptidase (Peptidase family M19) - - - - - - - - - - - - Peptidase_M19 WXD2_k127_2051122_9 756067.MicvaDRAFT_4922 1.965e-52 202.0 COG0500@1|root,COG0500@2|Bacteria,1G1YB@1117|Cyanobacteria,1HA07@1150|Oscillatoriales 1117|Cyanobacteria Q Cyclopropane fatty acid synthase and related methyltransferases - - - - - - - - - - - - Methyltransf_23 WXD2_k127_2051122_13 379066.GAU_1147 5.414e-22 103.0 COG0845@1|root,COG0845@2|Bacteria,1ZSX4@142182|Gemmatimonadetes 142182|Gemmatimonadetes M Biotin-lipoyl like - - - ko:K02005 - - - - ko00000 - - - HlyD_D23 WXD2_k127_2051122_8 1121920.AUAU01000013_gene1714 3.199e-56 202.0 COG0845@1|root,COG0845@2|Bacteria,3Y2XR@57723|Acidobacteria 57723|Acidobacteria M Biotin-lipoyl like - - - ko:K02005 - - - - ko00000 - - - HlyD_D23 WXD2_k127_2051122_3 1121920.AUAU01000013_gene1713 8.646e-113 377.0 COG0577@1|root,COG0577@2|Bacteria,3Y2MV@57723|Acidobacteria 57723|Acidobacteria V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD WXD2_k127_2051122_2 1121920.AUAU01000013_gene1712 2.463e-122 405.0 COG0577@1|root,COG0577@2|Bacteria,3Y3XI@57723|Acidobacteria 57723|Acidobacteria V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD WXD2_k127_2051122_11 204669.Acid345_3907 1.463e-30 135.0 COG3667@1|root,COG3667@2|Bacteria,3Y3FP@57723|Acidobacteria,2JITP@204432|Acidobacteriia 204432|Acidobacteriia P copper resistance - - - - - - - - - - - - - WXD2_k127_2051122_4 211586.SO_0152 2.049e-100 338.0 COG2866@1|root,COG2866@2|Bacteria,1QHMD@1224|Proteobacteria,1RYUG@1236|Gammaproteobacteria,2Q9QW@267890|Shewanellaceae 1236|Gammaproteobacteria M PFAM peptidase M14, carboxypeptidase A - - - - - - - - - - - - Peptidase_M14 WXD2_k127_208466_1 1429916.X566_05380 6.812e-263 824.0 COG1032@1|root,COG1032@2|Bacteria,1MY2Y@1224|Proteobacteria,2TT2P@28211|Alphaproteobacteria,3JWSW@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria C Elongator protein 3 MiaB NifB - - - - - - - - - - - - Radical_SAM WXD2_k127_208466_0 234267.Acid_6465 4.1e-313 988.0 COG1629@1|root,COG4771@2|Bacteria,3Y33S@57723|Acidobacteria 57723|Acidobacteria P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg,Plug WXD2_k127_208809_0 289376.THEYE_A0103 3.221e-174 555.0 COG0304@1|root,COG0304@2|Bacteria,3J0DH@40117|Nitrospirae 40117|Nitrospirae I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP - - 2.3.1.179 ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119 RC00039,RC02728,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Ketoacyl-synt_C,ketoacyl-synt WXD2_k127_208809_2 684949.ATTJ01000001_gene1860 4.014e-35 143.0 COG0666@1|root,COG0666@2|Bacteria 2|Bacteria G response to abiotic stimulus - - - - - - - - - - - - Ank,Ank_2,Ank_3,Ank_4,Ank_5 WXD2_k127_208809_1 861299.J421_3700 2.08e-88 308.0 COG1231@1|root,COG1231@2|Bacteria 2|Bacteria E oxidoreductase activity - - 1.4.3.4 ko:K00274 ko00260,ko00330,ko00340,ko00350,ko00360,ko00380,ko00950,ko00982,ko01100,ko01110,ko04726,ko04728,ko05030,ko05031,ko05034,map00260,map00330,map00340,map00350,map00360,map00380,map00950,map00982,map01100,map01110,map04726,map04728,map05030,map05031,map05034 M00135 R02173,R02382,R02529,R02532,R02613,R02908,R02919,R04025,R04300,R04674,R04890,R04893,R04894,R04907,R04908,R08346,R08347,R08348,R11354 RC00062,RC00160,RC00225,RC00676,RC00807,RC00808,RC01808,RC02226,RC02713 ko00000,ko00001,ko00002,ko01000 - - - Amino_oxidase,NAD_binding_8 WXD2_k127_2097646_0 1218352.B597_012915 0.0 1120.0 COG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,1RMBN@1236|Gammaproteobacteria,1Z1Z3@136846|Pseudomonas stutzeri group 1236|Gammaproteobacteria U efflux pump mexF - - ko:K18299 - M00641 - - ko00000,ko00002,ko01504,ko02000 2.A.6.2.16 - - ACR_tran WXD2_k127_2099701_2 1047013.AQSP01000123_gene1523 6.097e-77 277.0 COG1629@1|root,COG4771@2|Bacteria,2NP6Z@2323|unclassified Bacteria 2|Bacteria P COGs COG1629 Outer membrane receptor protein mostly Fe transport - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - CarbopepD_reg_2,CarboxypepD_reg,Plug,TonB_dep_Rec WXD2_k127_2099701_3 1385517.N800_08420 2.802e-52 188.0 COG0789@1|root,COG0789@2|Bacteria,1RGX6@1224|Proteobacteria,1S8ZG@1236|Gammaproteobacteria,1X6CR@135614|Xanthomonadales 135614|Xanthomonadales K helix_turn_helix, mercury resistance - - - ko:K19591 - M00769 - - ko00000,ko00002,ko01504,ko03000 - - - MerR,MerR-DNA-bind WXD2_k127_2099701_0 1449355.JQNR01000005_gene4914 1.019e-125 415.0 COG4941@1|root,COG4941@2|Bacteria,2GJ36@201174|Actinobacteria 201174|Actinobacteria K belongs to the sigma-70 factor family - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 WXD2_k127_2099701_4 1192034.CAP_0198 4.511e-32 129.0 COG3795@1|root,COG3795@2|Bacteria,1N32U@1224|Proteobacteria,432ET@68525|delta/epsilon subdivisions,2X94U@28221|Deltaproteobacteria,2Z1Y0@29|Myxococcales 28221|Deltaproteobacteria S YCII-related domain - - - - - - - - - - - - YCII WXD2_k127_2099701_1 1237149.C900_02493 5.911e-95 328.0 COG4409@1|root,COG4409@2|Bacteria,4NI5M@976|Bacteroidetes,47JYZ@768503|Cytophagia 976|Bacteroidetes G exo-alpha-(2->6)-sialidase activity - - - - - - - - - - - - BNR_2 WXD2_k127_2099701_5 196162.Noca_2922 1.505e-11 67.0 COG2217@1|root,COG2217@2|Bacteria,2GIRF@201174|Actinobacteria,4DPNE@85009|Propionibacteriales 201174|Actinobacteria P E1-E2 ATPase - - 3.6.3.3,3.6.3.4,3.6.3.5,3.6.3.54 ko:K01533,ko:K01534,ko:K12954,ko:K17686 ko01524,ko04016,map01524,map04016 - R00086 RC00002 ko00000,ko00001,ko01000 3.A.3,3.A.3.5,3.A.3.6 - - Cupredoxin_1,E1-E2_ATPase,HMA,Hydrolase,YHS WXD2_k127_2100439_1 1254432.SCE1572_23370 1.052e-121 396.0 COG2223@1|root,COG2223@2|Bacteria 2|Bacteria P nitrite transmembrane transporter activity - - - - - - - - - - - - - WXD2_k127_2100439_0 1254432.SCE1572_23375 0.0 1154.0 COG0243@1|root,COG0243@2|Bacteria,1NS3T@1224|Proteobacteria,42M9Q@68525|delta/epsilon subdivisions,2X7DH@28221|Deltaproteobacteria,2YWG8@29|Myxococcales 2|Bacteria C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family nasC - - ko:K00372 ko00910,ko01120,map00910,map01120 M00531 R00798,R01106 RC02812 ko00000,ko00001,ko00002,ko01000 - - - Molybdop_Fe4S4,Molybdopterin,Molydop_binding WXD2_k127_2100439_2 1254432.SCE1572_23380 1.329e-90 312.0 COG0437@1|root,COG0437@2|Bacteria 2|Bacteria C 4 iron, 4 sulfur cluster binding - - - - - - - - - - - - Fer4,Fer4_11,Fer4_4 WXD2_k127_2100439_3 1254432.SCE1572_23385 0.000695 46.0 COG0723@1|root,COG0723@2|Bacteria 2|Bacteria C oxidoreductase activity, acting on diphenols and related substances as donors - - - - - - - - - - - - Rieske WXD2_k127_213045_1 479434.Sthe_1459 4.208e-90 306.0 COG0498@1|root,COG0498@2|Bacteria,2G66Y@200795|Chloroflexi,27XPE@189775|Thermomicrobia 189775|Thermomicrobia E Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine - - 4.2.3.1 ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 M00018 R01466,R05086 RC00017,RC00526 ko00000,ko00001,ko00002,ko01000 - - - PALP WXD2_k127_213045_2 1121373.KB903620_gene1991 1.419e-51 203.0 COG0083@1|root,COG0083@2|Bacteria,4NE2M@976|Bacteroidetes,47KGY@768503|Cytophagia 976|Bacteroidetes E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate thrB - 2.7.1.39 ko:K00872 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 M00018 R01771 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - GHMP_kinases_C,GHMP_kinases_N WXD2_k127_213045_0 379066.GAU_1367 3.058e-206 672.0 COG0460@1|root,COG0527@1|root,COG0460@2|Bacteria,COG0527@2|Bacteria,1ZSSS@142182|Gemmatimonadetes 142182|Gemmatimonadetes E ACT domain - - 1.1.1.3,2.7.2.4 ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00017,M00018,M00526,M00527 R00480,R01773,R01775 RC00002,RC00043,RC00087 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase,ACT_7,Homoserine_dh,NAD_binding_3 WXD2_k127_21346_2 314345.SPV1_07461 2.365e-45 181.0 COG1216@1|root,COG1216@2|Bacteria,1MZSD@1224|Proteobacteria 1224|Proteobacteria G Glycosyl transferase, family 2 - - - - - - - - - - - - Glyco_transf_7C,Glycos_transf_2 WXD2_k127_21346_1 237368.SCABRO_01358 9.784e-81 285.0 COG1682@1|root,COG1682@2|Bacteria,2IYXC@203682|Planctomycetes 203682|Planctomycetes U COG1682 ABC-type polysaccharide polyol phosphate export systems, permease component - - - ko:K09690 ko02010,map02010 M00250 - - ko00000,ko00001,ko00002,ko02000 3.A.1.103 - - ABC2_membrane WXD2_k127_21346_0 324602.Caur_2107 3.847e-153 497.0 COG1134@1|root,COG1134@2|Bacteria,2G7ZX@200795|Chloroflexi,3772I@32061|Chloroflexia 32061|Chloroflexia GM PFAM ABC transporter related - - - ko:K09691 ko02010,map02010 M00250 - - ko00000,ko00001,ko00002,ko02000 3.A.1.103 - - ABC_tran WXD2_k127_21346_3 521674.Plim_1267 5.638e-41 172.0 COG1215@1|root,COG1215@2|Bacteria,2J4JI@203682|Planctomycetes 203682|Planctomycetes H TIGRFAM methyltransferase FkbM family - - - - - - - - - - - - Methyltransf_21 WXD2_k127_21346_6 62928.azo3261 2.71e-08 67.0 COG0438@1|root,COG0438@2|Bacteria 2|Bacteria M transferase activity, transferring glycosyl groups - - - ko:K00786 - - - - ko00000,ko01000 - - - GFO_IDH_MocA,Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1 WXD2_k127_21346_5 357808.RoseRS_4073 3.61e-28 125.0 COG1215@1|root,COG1215@2|Bacteria,2G9DX@200795|Chloroflexi,377P0@32061|Chloroflexia 32061|Chloroflexia M PFAM glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 WXD2_k127_21346_4 314345.SPV1_07486 3.863e-36 143.0 COG0110@1|root,COG0110@2|Bacteria 2|Bacteria S O-acyltransferase activity - - 2.3.1.79 ko:K00661 - - - - ko00000,ko01000 - - - Hexapep,Hexapep_2 WXD2_k127_2136967_3 1304872.JAGC01000003_gene2387 4.352e-06 60.0 COG5305@1|root,COG5305@2|Bacteria,1R9UF@1224|Proteobacteria,43EPC@68525|delta/epsilon subdivisions,2X196@28221|Deltaproteobacteria,2MEI2@213115|Desulfovibrionales 28221|Deltaproteobacteria S Dolichyl-phosphate-mannose-protein mannosyltransferase - - - - - - - - - - - - PMT_2 WXD2_k127_2136967_2 671143.DAMO_0087 5.831e-21 106.0 COG4733@1|root,COG4733@2|Bacteria,2NQ62@2323|unclassified Bacteria 2|Bacteria S Fibronectin type 3 domain - - - - - - - - - - - - PA14,fn3 WXD2_k127_2136967_0 1047013.AQSP01000137_gene520 3.634e-221 704.0 COG0449@1|root,COG0449@2|Bacteria,2NNWC@2323|unclassified Bacteria 2|Bacteria M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source glmS GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 - R00768 RC00010,RC00163,RC02752 ko00000,ko00001,ko01000,ko01002 - - iAF987.Gmet_1487 GATase_6,SIS WXD2_k127_2136967_1 1122137.AQXF01000003_gene2198 9.154e-33 132.0 COG0482@1|root,COG0482@2|Bacteria,1MUT1@1224|Proteobacteria,2TQU7@28211|Alphaproteobacteria 28211|Alphaproteobacteria J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 mnmA - 2.8.1.13 ko:K00566 ko04122,map04122 - R08700 RC02313,RC02315 ko00000,ko00001,ko01000,ko03016 - - - tRNA_Me_trans WXD2_k127_2138655_2 1267535.KB906767_gene4523 1.864e-16 94.0 COG2304@1|root,COG2304@2|Bacteria,3Y3ER@57723|Acidobacteria,2JKG4@204432|Acidobacteriia 204432|Acidobacteriia S oxidoreductase activity - - - - - - - - - - - - - WXD2_k127_2138655_3 179408.Osc7112_4339 5.984e-10 73.0 COG0457@1|root,COG0457@2|Bacteria,1G20P@1117|Cyanobacteria,1H8AZ@1150|Oscillatoriales 1117|Cyanobacteria L Tetratricopeptide repeat - - - - - - - - - - - - TPR_1,TPR_11,TPR_8 WXD2_k127_2138655_4 118173.KB235914_gene1270 4.989e-05 57.0 COG0457@1|root,COG0457@2|Bacteria,1G20P@1117|Cyanobacteria,1H8AZ@1150|Oscillatoriales 1117|Cyanobacteria L Tetratricopeptide repeat - - - ko:K12600 ko03018,map03018 M00392 - - ko00000,ko00001,ko00002,ko03019 - - - TPR_1,TPR_11,TPR_16,TPR_2,TPR_8 WXD2_k127_2138655_0 861299.J421_1461 8.97e-46 189.0 COG4219@1|root,COG4219@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - CarboxypepD_reg,HEAT_2,Peptidase_M56,Secretin,TonB_C WXD2_k127_2138655_1 886293.Sinac_6279 1.515e-40 155.0 COG3682@1|root,COG3682@2|Bacteria,2J0QT@203682|Planctomycetes 203682|Planctomycetes K Penicillinase repressor - - - - - - - - - - - - Penicillinase_R WXD2_k127_2149417_0 483219.LILAB_09175 6.111e-233 764.0 COG1028@1|root,COG2141@1|root,COG1028@2|Bacteria,COG2141@2|Bacteria,1NXIH@1224|Proteobacteria,43ASU@68525|delta/epsilon subdivisions 1224|Proteobacteria C Luciferase-like monooxygenase - - - - - - - - - - - - Bac_luciferase WXD2_k127_2149417_1 58344.JOEL01000001_gene397 2.249e-40 159.0 COG1020@1|root,COG1020@2|Bacteria,2GISR@201174|Actinobacteria 201174|Actinobacteria Q Non-ribosomal peptide synthetase modules and related proteins - - - - - - - - - - - - AMP-binding,AMP-binding_C,Condensation,PP-binding,Thioesterase WXD2_k127_2149709_1 404380.Gbem_0959 4.446e-85 287.0 COG0522@1|root,COG0522@2|Bacteria,1MW0U@1224|Proteobacteria,42M5X@68525|delta/epsilon subdivisions,2WJGN@28221|Deltaproteobacteria 28221|Deltaproteobacteria J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit rpsD GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - ko:K02986 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S4,S4 WXD2_k127_2149709_5 1370125.AUWT01000024_gene5505 1.706e-53 191.0 COG0100@1|root,COG0100@2|Bacteria,2IFFC@201174|Actinobacteria,238NX@1762|Mycobacteriaceae 201174|Actinobacteria J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome rpsK GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02948 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S11 WXD2_k127_2149709_7 2325.TKV_c20320 3.785e-47 173.0 COG0099@1|root,COG0099@2|Bacteria,1V3JH@1239|Firmicutes,24HCT@186801|Clostridia,42G97@68295|Thermoanaerobacterales 186801|Clostridia J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits rpsM - - ko:K02952 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S13 WXD2_k127_2149709_10 880072.Desac_1432 5.533e-13 69.0 COG0257@1|root,COG0257@2|Bacteria,1NGEI@1224|Proteobacteria,42WXD@68525|delta/epsilon subdivisions,2WSYK@28221|Deltaproteobacteria 28221|Deltaproteobacteria J Belongs to the bacterial ribosomal protein bL36 family rpmJ - - ko:K02919 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L36 WXD2_k127_2149709_8 439235.Dalk_1893 2.8e-34 132.0 COG0361@1|root,COG0361@2|Bacteria,1MZFU@1224|Proteobacteria,42TRU@68525|delta/epsilon subdivisions,2WPZK@28221|Deltaproteobacteria,2MKKE@213118|Desulfobacterales 28221|Deltaproteobacteria J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex infA GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - ko:K02518 - - - - ko00000,ko03012 - - - eIF-1a WXD2_k127_2149709_2 1267533.KB906735_gene5108 2.094e-73 256.0 COG0024@1|root,COG0024@2|Bacteria,3Y2HJ@57723|Acidobacteria,2JI6Z@204432|Acidobacteriia 204432|Acidobacteriia J Methionine aminopeptidase map - 3.4.11.18 ko:K01265 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M24 WXD2_k127_2149709_3 1125863.JAFN01000001_gene3315 8.781e-70 242.0 COG0563@1|root,COG0563@2|Bacteria,1MXCZ@1224|Proteobacteria,42M8E@68525|delta/epsilon subdivisions,2WJH0@28221|Deltaproteobacteria 28221|Deltaproteobacteria F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism adk GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 M00049 R00127,R01547,R11319 RC00002 ko00000,ko00001,ko00002,ko01000,ko04147 - - - ADK,ADK_lid WXD2_k127_2149709_0 1047013.AQSP01000074_gene1894 1.682e-195 621.0 COG0201@1|root,COG0201@2|Bacteria,2NNVK@2323|unclassified Bacteria 2|Bacteria U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently secY GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5 - - SecY WXD2_k127_2149709_6 1123359.AUIQ01000008_gene918 1.387e-48 178.0 COG0200@1|root,COG0200@2|Bacteria,1V3KE@1239|Firmicutes,4HFPW@91061|Bacilli,4B2A4@81852|Enterococcaceae 91061|Bacilli J binds to the 23S rRNA rplO GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02876 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L27A WXD2_k127_2149709_11 317655.Sala_2800 1.896e-11 66.0 COG1841@1|root,COG1841@2|Bacteria,1PU2S@1224|Proteobacteria,2UF55@28211|Alphaproteobacteria,2K6V8@204457|Sphingomonadales 204457|Sphingomonadales J Ribosomal protein L30 rpmD - - ko:K02907 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L30 WXD2_k127_2149709_4 1121918.ARWE01000001_gene2256 2.656e-58 208.0 COG0098@1|root,COG0098@2|Bacteria,1MUS4@1224|Proteobacteria,42QX0@68525|delta/epsilon subdivisions,2WNBN@28221|Deltaproteobacteria,43SEU@69541|Desulfuromonadales 28221|Deltaproteobacteria J Ribosomal protein S5, C-terminal domain rpsE GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02988 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S5,Ribosomal_S5_C WXD2_k127_2149709_9 234267.Acid_5102 2.592e-23 100.0 COG0256@1|root,COG0256@2|Bacteria,3Y5CH@57723|Acidobacteria 57723|Acidobacteria J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance rplR - - ko:K02881 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L18p WXD2_k127_2166783_3 234267.Acid_1498 8.41e-41 154.0 COG1030@1|root,COG1030@2|Bacteria,3Y31N@57723|Acidobacteria 57723|Acidobacteria O NfeD-like C-terminal, partner-binding - - - ko:K07403 - - - - ko00000 - - - NfeD WXD2_k127_2166783_2 592029.DDD_0384 4.292e-50 188.0 COG1216@1|root,COG1216@2|Bacteria,4PKBZ@976|Bacteroidetes,1IJBV@117743|Flavobacteriia,3HJGW@363408|Nonlabens 976|Bacteroidetes S Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2,Glyphos_transf WXD2_k127_2166783_1 204669.Acid345_3211 2.345e-185 600.0 COG1228@1|root,COG1228@2|Bacteria,3Y32S@57723|Acidobacteria,2JIA1@204432|Acidobacteriia 2|Bacteria Q Amidohydrolase family - - - - - - - - - - - - Amidohydro_1 WXD2_k127_2166783_0 187272.Mlg_0261 9.953e-291 917.0 COG2352@1|root,COG2352@2|Bacteria,1MUD5@1224|Proteobacteria,1RPTP@1236|Gammaproteobacteria,1WVV2@135613|Chromatiales 135613|Chromatiales C Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle ppc - 4.1.1.31 ko:K01595 ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200 M00168,M00170,M00171,M00172,M00173,M00346,M00374 R00345 RC02741 ko00000,ko00001,ko00002,ko01000 - - - PEPcase WXD2_k127_2166783_4 1201288.M900_A0272 1.436e-16 82.0 COG1234@1|root,COG1234@2|Bacteria,1QU4B@1224|Proteobacteria,42SHU@68525|delta/epsilon subdivisions,2WPGG@28221|Deltaproteobacteria 28221|Deltaproteobacteria S cAMP phosphodiesterases class-II - - 3.1.4.17 ko:K01120 ko00230,map00230 - R00191,R01234 RC00296 ko00000,ko00001,ko01000 - - - Lactamase_B_2,PDEase_II WXD2_k127_2171072_2 880073.Calab_2988 2.125e-75 261.0 COG2013@1|root,COG2013@2|Bacteria,2NQA0@2323|unclassified Bacteria 2|Bacteria S Mitochondrial biogenesis AIM24 - - - - - - - - - - - - AIM24 WXD2_k127_2171072_1 443143.GM18_0868 7.964e-91 307.0 COG1692@1|root,COG1692@2|Bacteria,1MW12@1224|Proteobacteria,42PCG@68525|delta/epsilon subdivisions,2WM8X@28221|Deltaproteobacteria,43TFA@69541|Desulfuromonadales 28221|Deltaproteobacteria S YmdB-like protein - - - ko:K09769 - - - - ko00000 - - - YmdB WXD2_k127_2171072_0 1121920.AUAU01000033_gene2764 4.721e-104 342.0 COG1418@1|root,COG1418@2|Bacteria 2|Bacteria S mRNA catabolic process rny - - ko:K18682 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - DUF3552,HD,KH_1 WXD2_k127_2175551_4 1242864.D187_010394 4.211e-10 70.0 COG2905@1|root,COG2905@2|Bacteria,1R0B9@1224|Proteobacteria,43CTI@68525|delta/epsilon subdivisions,2X8MP@28221|Deltaproteobacteria 28221|Deltaproteobacteria T Cyclic nucleotide-monophosphate binding domain - - - ko:K04739 ko04910,map04910 - - - ko00000,ko00001 - - - cNMP_binding WXD2_k127_2175551_2 596152.DesU5LDRAFT_3532 3.434e-22 105.0 COG1729@1|root,COG1729@2|Bacteria,1MUSV@1224|Proteobacteria,42T19@68525|delta/epsilon subdivisions,2WQ0M@28221|Deltaproteobacteria,2M91B@213115|Desulfovibrionales 28221|Deltaproteobacteria D Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - - - - - - - - - - TPR_16,TPR_6 WXD2_k127_2175551_3 1278073.MYSTI_02286 1.112e-19 98.0 COG4105@1|root,COG4105@2|Bacteria,1MVS5@1224|Proteobacteria,42RV8@68525|delta/epsilon subdivisions,2WKU0@28221|Deltaproteobacteria,2YVHZ@29|Myxococcales 28221|Deltaproteobacteria M Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane bamD - - ko:K05807 - - - - ko00000,ko02000 1.B.33.1 - - YfiO WXD2_k127_2175551_1 1430331.EP10_16745 3.539e-76 261.0 COG0036@1|root,COG0036@2|Bacteria,1TQK8@1239|Firmicutes,4H9RW@91061|Bacilli,1WE4J@129337|Geobacillus 91061|Bacilli G Ribulose-phosphate 3 epimerase family rpe GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007 R01529 RC00540 ko00000,ko00001,ko00002,ko01000 - - - Ribul_P_3_epim WXD2_k127_2175551_5 1128398.Curi_c16780 1.896e-08 67.0 COG0515@1|root,COG0515@2|Bacteria,1TP3F@1239|Firmicutes,2492G@186801|Clostridia,2683T@186813|unclassified Clostridiales 186801|Clostridia KLT Protein kinase domain prkC - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PASTA,Pkinase WXD2_k127_2175551_0 861299.J421_3828 1.954e-79 274.0 COG0466@1|root,COG0466@2|Bacteria,1ZTCP@142182|Gemmatimonadetes 142182|Gemmatimonadetes O ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner - - 3.4.21.53 ko:K01338 ko04112,map04112 - - - ko00000,ko00001,ko01000,ko01002 - - - AAA,LON_substr_bdg,Lon_C WXD2_k127_217622_3 234267.Acid_2125 7.4e-31 134.0 COG1216@1|root,COG4976@1|root,COG1216@2|Bacteria,COG4976@2|Bacteria,3Y878@57723|Acidobacteria 57723|Acidobacteria S Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 WXD2_k127_217622_4 1236959.BAMT01000002_gene1961 5.596e-07 56.0 COG2165@1|root,COG2165@2|Bacteria,1N1QJ@1224|Proteobacteria,2VTYJ@28216|Betaproteobacteria,2KMZA@206350|Nitrosomonadales 206350|Nitrosomonadales NU Prokaryotic N-terminal methylation motif - - - ko:K02456 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - N_methyl,T2SSG WXD2_k127_217622_0 929712.KI912613_gene2495 2.143e-143 463.0 COG1209@1|root,COG1209@2|Bacteria,2GP20@201174|Actinobacteria,4CPTQ@84995|Rubrobacteria 84995|Rubrobacteria M Nucleotidyl transferase - - 2.7.7.24 ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 M00793 R02328 RC00002 ko00000,ko00001,ko00002,ko01000 - - - NTP_transferase WXD2_k127_217622_2 316067.Geob_1869 1.946e-46 191.0 COG1452@1|root,COG1452@2|Bacteria,1MUJC@1224|Proteobacteria,42N34@68525|delta/epsilon subdivisions,2WJUD@28221|Deltaproteobacteria,43TYF@69541|Desulfuromonadales 28221|Deltaproteobacteria M Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane lptD - - ko:K04744 - - - - ko00000,ko02000 1.B.42.1 - iAF987.Gmet_2474 OstA,OstA_2,OstA_C WXD2_k127_217622_1 558884.JRGM01000129_gene3045 1.054e-64 233.0 COG0196@1|root,COG0196@2|Bacteria,1MV9I@1224|Proteobacteria,1RN44@1236|Gammaproteobacteria,1Y3RC@135624|Aeromonadales 135624|Aeromonadales H Belongs to the ribF family ribF - 2.7.1.26,2.7.7.2 ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R00161,R00549 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - FAD_syn,Flavokinase WXD2_k127_21788_1 1124780.ANNU01000016_gene1823 5.634e-64 229.0 COG0308@1|root,COG0308@2|Bacteria,4NFT0@976|Bacteroidetes,47M3W@768503|Cytophagia 976|Bacteroidetes E Leukotriene A4 hydrolase, C-terminal - - - - - - - - - - - - Leuk-A4-hydro_C,Peptidase_M1 WXD2_k127_21788_2 1158345.JNLL01000001_gene1385 2.815e-50 196.0 COG0663@1|root,COG0663@2|Bacteria,2G3ZR@200783|Aquificae 200783|Aquificae S Bacterial transferase hexapeptide (six repeats) - - - - - - - - - - - - Hexapep WXD2_k127_21788_0 1430331.EP10_01675 1.724e-196 629.0 COG0173@1|root,COG0173@2|Bacteria,1TPCN@1239|Firmicutes,4HACD@91061|Bacilli,1WF3V@129337|Geobacillus 91061|Bacilli J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) aspS - 6.1.1.12 ko:K01876 ko00970,map00970 M00359,M00360 R05577 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - GAD,tRNA-synt_2,tRNA_anti-codon WXD2_k127_2181197_1 479434.Sthe_0155 1.463e-82 280.0 COG2197@1|root,COG2197@2|Bacteria,2G8EU@200795|Chloroflexi,27XKP@189775|Thermomicrobia 189775|Thermomicrobia K helix_turn_helix, Lux Regulon - - - - - - - - - - - - GerE,Response_reg WXD2_k127_2181197_0 525904.Tter_2549 2.194e-136 454.0 COG3850@1|root,COG3850@2|Bacteria,2NS42@2323|unclassified Bacteria 2|Bacteria T histidine kinase dimerisation and phosphoacceptor region - - 2.7.13.3 ko:K03406,ko:K07673,ko:K07675 ko02020,ko02030,map02020,map02030 M00471,M00473 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035 - - - GAF_2,HAMP,HATPase_c,HisKA_3,LapD_MoxY_N WXD2_k127_2181197_2 234267.Acid_2858 7.439e-35 138.0 COG3797@1|root,COG3797@2|Bacteria,3Y5RN@57723|Acidobacteria 57723|Acidobacteria S Protein of unknown function (DUF1697) - - - - - - - - - - - - DUF1697 WXD2_k127_2185598_1 391625.PPSIR1_35762 6.294e-60 227.0 COG0747@1|root,COG0747@2|Bacteria 2|Bacteria E dipeptide transport ddpA - - ko:K02035 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - SBP_bac_5 WXD2_k127_2185598_0 290397.Adeh_3731 2.188e-78 270.0 COG1294@1|root,COG1294@2|Bacteria,1MURP@1224|Proteobacteria,42NHN@68525|delta/epsilon subdivisions,2WJ4S@28221|Deltaproteobacteria 28221|Deltaproteobacteria C Cytochrome d ubiquinol oxidase, subunit II cydB - 1.10.3.14 ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00153 R11325 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.4.3 - - Cyt_bd_oxida_II WXD2_k127_2198039_2 338966.Ppro_3385 1.88e-09 63.0 COG1086@1|root,COG1086@2|Bacteria,1MWKY@1224|Proteobacteria,42MMR@68525|delta/epsilon subdivisions,2WJEB@28221|Deltaproteobacteria,43TVP@69541|Desulfuromonadales 28221|Deltaproteobacteria GM Polysaccharide biosynthesis protein CapD - - - - - - - - - - - - CoA_binding_3,Polysacc_synt_2 WXD2_k127_2198039_3 880073.Calab_1698 6.984e-06 59.0 COG3307@1|root,COG3307@2|Bacteria,2NS18@2323|unclassified Bacteria 2|Bacteria M O-Antigen ligase - - - ko:K13009 - - - - ko00000,ko01000,ko01005 - - - Wzy_C,Wzy_C_2 WXD2_k127_2198039_1 243233.MCA0612 3.064e-70 249.0 COG0451@1|root,COG0451@2|Bacteria,1MX2J@1224|Proteobacteria,1RPHW@1236|Gammaproteobacteria,1XE47@135618|Methylococcales 135618|Methylococcales M NAD(P)H-binding - - 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 - - - Epimerase WXD2_k127_2198039_0 1173024.KI912148_gene3148 2.898e-85 286.0 COG0399@1|root,COG0399@2|Bacteria,1G0XH@1117|Cyanobacteria 1117|Cyanobacteria E Belongs to the DegT DnrJ EryC1 family - - - - - - - - - - - - DegT_DnrJ_EryC1 WXD2_k127_2202137_9 1338011.BD94_3953 3.703e-40 166.0 COG2755@1|root,COG2755@2|Bacteria,4NGTK@976|Bacteroidetes,1HY1A@117743|Flavobacteriia,34PMR@308865|Elizabethkingia 976|Bacteroidetes E GDSL-like Lipase/Acylhydrolase - - - - - - - - - - - - Lipase_GDSL WXD2_k127_2202137_6 880073.Calab_1642 2.591e-62 231.0 COG2067@1|root,COG2067@2|Bacteria,2NPN1@2323|unclassified Bacteria 2|Bacteria I Membrane protein involved in aromatic hydrocarbon degradation fadL - - ko:K06076 - - - - ko00000,ko02000 1.B.9 - - Toluene_X WXD2_k127_2202137_1 414684.RC1_0029 2.291e-148 483.0 COG0064@1|root,COG0064@2|Bacteria,1MUKG@1224|Proteobacteria,2TRHX@28211|Alphaproteobacteria,2JPFI@204441|Rhodospirillales 204441|Rhodospirillales J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) gatB - 6.3.5.6,6.3.5.7 ko:K02434 ko00970,ko01100,map00970,map01100 - R03905,R04212 RC00010 ko00000,ko00001,ko01000,ko03029 - - - GatB_N,GatB_Yqey WXD2_k127_2202137_8 316274.Haur_4216 1.392e-50 205.0 COG2199@1|root,COG2203@1|root,COG2203@2|Bacteria,COG3706@2|Bacteria,2G8CK@200795|Chloroflexi,3776C@32061|Chloroflexia 32061|Chloroflexia T PFAM GGDEF domain containing protein - - - - - - - - - - - - GAF_2,GGDEF WXD2_k127_2202137_2 1267534.KB906754_gene2572 1.287e-123 410.0 COG1473@1|root,COG1473@2|Bacteria,3Y40E@57723|Acidobacteria,2JIBT@204432|Acidobacteriia 204432|Acidobacteriia S Peptidase dimerisation domain - - - - - - - - - - - - M20_dimer,Peptidase_M20 WXD2_k127_2202137_0 1123368.AUIS01000006_gene566 1.816e-159 537.0 COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,1RM8A@1236|Gammaproteobacteria,2NDJD@225057|Acidithiobacillales 225057|Acidithiobacillales T Diguanylate cyclase - - - - - - - - - - - - EAL,GAF_2,GGDEF,PAS_4,Response_reg WXD2_k127_2202137_7 225849.swp_0779 8.879e-53 200.0 COG1162@1|root,COG1162@2|Bacteria,1MUEF@1224|Proteobacteria,1RMMB@1236|Gammaproteobacteria,2QA3K@267890|Shewanellaceae 1236|Gammaproteobacteria S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit rsgA GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0022613,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0036094,GO:0042254,GO:0042274,GO:0043167,GO:0043168,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 3.1.3.100 ko:K06949 ko00730,ko01100,map00730,map01100 - R00615,R02135 RC00002,RC00017 ko00000,ko00001,ko01000,ko03009 - - iAF1260.b4161,iBWG_1329.BWG_3876,iECDH10B_1368.ECDH10B_4356,iECDH1ME8569_1439.ECDH1ME8569_4021,iEKO11_1354.EKO11_4148,iEcDH1_1363.EcDH1_3829,iEcolC_1368.EcolC_3849,iJO1366.b4161,iUMNK88_1353.UMNK88_5099,iY75_1357.Y75_RS21675 RsgA_GTPase WXD2_k127_2202137_11 886293.Sinac_2273 1.14e-31 131.0 COG0220@1|root,COG0220@2|Bacteria,2IZJM@203682|Planctomycetes 203682|Planctomycetes J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA trmB GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 ko:K03439 - - - - ko00000,ko01000,ko03016 - - - Methyltransf_4 WXD2_k127_2202137_10 414684.RC1_1807 2.697e-38 149.0 COG0817@1|root,COG0817@2|Bacteria,1MUJI@1224|Proteobacteria,2U70Z@28211|Alphaproteobacteria,2JS5T@204441|Rhodospirillales 204441|Rhodospirillales L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group ruvC - 3.1.22.4 ko:K01159 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - RuvC WXD2_k127_2202137_12 204669.Acid345_3976 4.346e-27 115.0 COG0477@1|root,COG2814@2|Bacteria,3Y47I@57723|Acidobacteria,2JJ64@204432|Acidobacteriia 204432|Acidobacteriia EGP Transmembrane secretion effector - - - - - - - - - - - - MFS_3 WXD2_k127_2202137_5 234267.Acid_2167 9.789e-63 226.0 COG0477@1|root,COG2814@2|Bacteria,3Y47I@57723|Acidobacteria 57723|Acidobacteria EGP Transmembrane secretion effector - - - - - - - - - - - - MFS_3 WXD2_k127_2202137_3 266117.Rxyl_2325 6.079e-114 377.0 COG1071@1|root,COG1071@2|Bacteria,2IBRC@201174|Actinobacteria,4CS4C@84995|Rubrobacteria 84995|Rubrobacteria C The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) pdhA - 1.2.4.1 ko:K00161 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00307 R00014,R00209,R01699,R03270 RC00004,RC00027,RC00627,RC02742,RC02744,RC02882 br01601,ko00000,ko00001,ko00002,ko01000 - - - E1_dh WXD2_k127_2202137_4 266117.Rxyl_2324 1.949e-101 336.0 COG0022@1|root,COG0022@2|Bacteria,2GKFE@201174|Actinobacteria,4CRUB@84995|Rubrobacteria 84995|Rubrobacteria C Transketolase, pyrimidine binding domain - - 1.2.4.1 ko:K00162 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00307 R00014,R00209,R01699,R03270 RC00004,RC00027,RC00627,RC02742,RC02744,RC02882 br01601,ko00000,ko00001,ko00002,ko01000 - - - Transket_pyr,Transketolase_C WXD2_k127_2208711_7 272134.KB731324_gene1612 0.0004032 51.0 COG1848@1|root,COG1848@2|Bacteria,1G6WR@1117|Cyanobacteria 1117|Cyanobacteria S Toxic component of a toxin-antitoxin (TA) module. An RNase - - - - - - - - - - - - PIN WXD2_k127_2208711_6 419947.MRA_2623A 0.0001122 49.0 COG2002@1|root,COG2002@2|Bacteria,2HANT@201174|Actinobacteria 201174|Actinobacteria K toxin-antitoxin pair type II binding - - - - - - - - - - - - - WXD2_k127_2208711_2 1123277.KB893178_gene2658 2.601e-107 357.0 COG1506@1|root,COG1506@2|Bacteria,4NH1V@976|Bacteroidetes,47TY4@768503|Cytophagia 976|Bacteroidetes E X-Pro dipeptidyl-peptidase (S15 family) - - - - - - - - - - - - Peptidase_S9 WXD2_k127_2208711_1 1500897.JQNA01000002_gene4645 1.331e-134 453.0 COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2VH3V@28216|Betaproteobacteria,1K0RA@119060|Burkholderiaceae 28216|Betaproteobacteria T GGDEF domain containing protein - - - - - - - - - - - - EAL,GAF,GAF_2,GGDEF,HAMP,PAS,PAS_4,PAS_8,PAS_9,dCache_3 WXD2_k127_2208711_3 880071.Fleli_0390 9.297e-62 224.0 COG1028@1|root,COG1028@2|Bacteria,4PP79@976|Bacteroidetes 976|Bacteroidetes IQ KR domain - - 1.1.1.100 ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short WXD2_k127_2208711_4 1174528.JH992898_gene5340 1.304e-55 210.0 COG4188@1|root,COG4188@2|Bacteria,1GD7B@1117|Cyanobacteria 1117|Cyanobacteria S Platelet-activating factor acetylhydrolase, isoform II - - - - - - - - - - - - PAF-AH_p_II WXD2_k127_2208711_0 909663.KI867150_gene1794 2.499e-208 668.0 COG0210@1|root,COG0210@2|Bacteria,1MU0G@1224|Proteobacteria,42MKU@68525|delta/epsilon subdivisions,2WJR3@28221|Deltaproteobacteria,2MQD2@213462|Syntrophobacterales 28221|Deltaproteobacteria L PFAM UvrD REP helicase - - 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - UvrD-helicase,UvrD_C WXD2_k127_2208711_5 1444309.JAQG01000054_gene838 4.513e-18 93.0 COG0747@1|root,COG0747@2|Bacteria,1TQ0N@1239|Firmicutes,4HARF@91061|Bacilli,26QIY@186822|Paenibacillaceae 91061|Bacilli E ABC transporter substrate-binding protein dbp - - ko:K02035 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - SBP_bac_5 WXD2_k127_2214390_2 768671.ThimaDRAFT_4869 2.079e-67 239.0 COG0535@1|root,COG0535@2|Bacteria 2|Bacteria I radical SAM domain protein - - - ko:K22227 - - - - ko00000 - - - Fer4_12,Fer4_14,Radical_SAM,SPASM WXD2_k127_2214390_1 335543.Sfum_4007 2.864e-96 357.0 COG1572@1|root,COG1572@2|Bacteria,1N1AP@1224|Proteobacteria 1224|Proteobacteria S Peptidase family C25 - - - - - - - - - - - - Peptidase_C25 WXD2_k127_2214390_4 946362.XP_004996065.1 9.372e-09 70.0 KOG1216@1|root,KOG1217@1|root,KOG1216@2759|Eukaryota,KOG1217@2759|Eukaryota,38BUP@33154|Opisthokonta 33154|Opisthokonta T calcium ion binding CRB1 GO:0001654,GO:0001754,GO:0001917,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005902,GO:0005911,GO:0005912,GO:0005913,GO:0007009,GO:0007154,GO:0007163,GO:0007267,GO:0007275,GO:0007399,GO:0007423,GO:0008150,GO:0009653,GO:0009887,GO:0009987,GO:0010256,GO:0016020,GO:0016043,GO:0016324,GO:0022008,GO:0023052,GO:0030054,GO:0030154,GO:0030182,GO:0032501,GO:0032502,GO:0032991,GO:0042461,GO:0042462,GO:0042995,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045177,GO:0046530,GO:0048468,GO:0048513,GO:0048592,GO:0048666,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0061024,GO:0070161,GO:0071840,GO:0071944,GO:0090596,GO:0097458,GO:0098590,GO:0098858,GO:0120025 - ko:K02599,ko:K04594,ko:K16681 ko01522,ko04320,ko04330,ko04390,ko04391,ko04658,ko04919,ko05020,ko05165,ko05200,ko05206,ko05224,map01522,map04320,map04330,map04390,map04391,map04658,map04919,map05020,map05165,map05200,map05206,map05224 M00682 - - ko00000,ko00001,ko00002,ko04030 - - - EGF,EGF_CA,Laminin_G_2,hEGF WXD2_k127_2214390_3 224324.aq_1207 8.646e-31 130.0 COG0735@1|root,COG0735@2|Bacteria,2G44Z@200783|Aquificae 200783|Aquificae K Belongs to the Fur family - - - ko:K03711,ko:K09825 - - - - ko00000,ko03000 - - - FUR WXD2_k127_2214390_0 246197.MXAN_5402 7.972e-136 449.0 COG1858@1|root,COG1858@2|Bacteria,1N4E1@1224|Proteobacteria,43EW7@68525|delta/epsilon subdivisions,2WM9U@28221|Deltaproteobacteria,2YXC0@29|Myxococcales 28221|Deltaproteobacteria C Cytochrome c - - - - - - - - - - - - - WXD2_k127_221859_4 420890.LCGL_1714 1.169e-43 175.0 COG1195@1|root,COG1195@2|Bacteria,1TP9U@1239|Firmicutes,4HA0W@91061|Bacilli,1YBBJ@1357|Lactococcus 91061|Bacilli L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP recF GO:0000731,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - ko:K03629 ko03440,map03440 - - - ko00000,ko00001,ko03400 - - - SMC_N WXD2_k127_221859_0 1232410.KI421422_gene2032 1.407e-284 897.0 COG0187@1|root,COG0187@2|Bacteria,1MVKT@1224|Proteobacteria,42M7M@68525|delta/epsilon subdivisions,2WJ9X@28221|Deltaproteobacteria,43SYW@69541|Desulfuromonadales 28221|Deltaproteobacteria L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner gyrB - 5.99.1.3 ko:K02470 - - - - ko00000,ko01000,ko03032,ko03400 - - - DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim WXD2_k127_221859_1 220664.PFL_4314 3.466e-268 852.0 COG0188@1|root,COG0188@2|Bacteria,1MUGG@1224|Proteobacteria,1RN03@1236|Gammaproteobacteria,1YPD6@136843|Pseudomonas fluorescens group 1236|Gammaproteobacteria L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner gyrA GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0018130,GO:0019438,GO:0032774,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0042493,GO:0042623,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097659,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 ko:K02469 - - - - ko00000,ko01000,ko03032,ko03400 - - - DNA_gyraseA_C,DNA_topoisoIV WXD2_k127_221859_6 1267534.KB906755_gene3946 1.457e-05 51.0 COG2952@1|root,COG2952@2|Bacteria,3Y55F@57723|Acidobacteria,2JJNJ@204432|Acidobacteriia 204432|Acidobacteriia S Protein of unknown function (DUF507) - - - ko:K09804 - - - - ko00000 - - - DUF507 WXD2_k127_221859_2 1232410.KI421426_gene1342 1.337e-157 512.0 COG1530@1|root,COG1530@2|Bacteria,1MV65@1224|Proteobacteria,42M5E@68525|delta/epsilon subdivisions,2WIV6@28221|Deltaproteobacteria,43S03@69541|Desulfuromonadales 28221|Deltaproteobacteria J Ribonuclease E/G family cafA - - ko:K08301 - - - - ko00000,ko01000,ko03009,ko03019 - - - RNase_E_G,S1 WXD2_k127_221859_5 1203554.HMPREF1476_02118 2.173e-08 59.0 COG2197@1|root,COG2197@2|Bacteria,1R2TM@1224|Proteobacteria,2VS9J@28216|Betaproteobacteria,4PR5X@995019|Sutterellaceae 28216|Betaproteobacteria K Bacterial regulatory proteins, luxR family - - - - - - - - - - - - GerE,Response_reg WXD2_k127_221859_3 1144275.COCOR_00645 5.713e-72 253.0 COG4395@1|root,COG4395@2|Bacteria 2|Bacteria S Tim44 MA20_24770 - - ko:K15539 - - - - ko00000 - - - Tim44 WXD2_k127_2221424_0 290317.Cpha266_2588 3.763e-169 548.0 COG0318@1|root,COG0318@2|Bacteria,1FDAB@1090|Chlorobi 1090|Chlorobi IQ PFAM AMP-dependent synthetase and ligase - - 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding,AMP-binding_C WXD2_k127_2221424_1 713586.KB900536_gene377 3.292e-140 451.0 COG0111@1|root,COG0111@2|Bacteria,1NU4B@1224|Proteobacteria,1T1T1@1236|Gammaproteobacteria,1X2QZ@135613|Chromatiales 135613|Chromatiales EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - 1.1.1.399,1.1.1.95 ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R01513 RC00031 ko00000,ko00001,ko00002,ko01000,ko04147 - - - 2-Hacid_dh,2-Hacid_dh_C WXD2_k127_2221424_2 926549.KI421517_gene665 1.381e-52 192.0 COG4430@1|root,COG4430@2|Bacteria,4NNH0@976|Bacteroidetes,47PYG@768503|Cytophagia 976|Bacteroidetes S Bacteriocin-protection, YdeI or OmpD-Associated - - - - - - - - - - - - DUF1801,OmdA WXD2_k127_2226966_1 1280390.CBQR020000020_gene428 1.56e-42 162.0 COG1670@1|root,COG1670@2|Bacteria,1V54D@1239|Firmicutes,4HIQW@91061|Bacilli,26Y91@186822|Paenibacillaceae 91061|Bacilli J Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_3 WXD2_k127_2226966_2 1121920.AUAU01000006_gene266 1.687e-42 157.0 COG2329@1|root,COG2329@2|Bacteria,3Y5V2@57723|Acidobacteria 57723|Acidobacteria S Antibiotic biosynthesis monooxygenase - - - - - - - - - - - - - WXD2_k127_2226966_5 397287.C807_01282 0.0002345 49.0 2ECCZ@1|root,336B8@2|Bacteria,1VGWG@1239|Firmicutes,24PAF@186801|Clostridia,27NNM@186928|unclassified Lachnospiraceae 186801|Clostridia - - - - - - - - - - - - - - - WXD2_k127_2226966_4 1120999.JONM01000004_gene3676 1.383e-26 116.0 COG3896@1|root,COG3896@2|Bacteria,1NEN0@1224|Proteobacteria,2VY3P@28216|Betaproteobacteria 28216|Betaproteobacteria V Chloramphenicol phosphotransferase-like protein - - - ko:K18554 - - - - br01600,ko00000,ko01000,ko01504 - - - CPT WXD2_k127_2226966_3 1379698.RBG1_1C00001G0743 1.326e-32 137.0 COG2318@1|root,COG2318@2|Bacteria,2NRHG@2323|unclassified Bacteria 2|Bacteria S DinB superfamily dinB - - ko:K07552 - - - - ko00000,ko02000 2.A.1.2 - - DinB WXD2_k127_2228719_1 316067.Geob_1382 2.7e-129 434.0 2EWA0@1|root,33PNR@2|Bacteria,1NSPR@1224|Proteobacteria,42YN1@68525|delta/epsilon subdivisions,2WTJI@28221|Deltaproteobacteria,43U3D@69541|Desulfuromonadales 28221|Deltaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_2228719_0 479434.Sthe_0131 2.618e-215 692.0 COG1331@1|root,COG1331@2|Bacteria,2G5R1@200795|Chloroflexi,27XU1@189775|Thermomicrobia 189775|Thermomicrobia O Protein of unknown function, DUF255 - - - ko:K06888 - - - - ko00000 - - - Thioredox_DsbH WXD2_k127_2232218_3 251221.35210997 2.779e-91 309.0 COG1131@1|root,COG1131@2|Bacteria,1G0BQ@1117|Cyanobacteria 1117|Cyanobacteria V ABC transporter - - - - - - - - - - - - ABC_tran WXD2_k127_2232218_2 251221.35210998 2.827e-95 333.0 COG0842@1|root,COG0842@2|Bacteria 2|Bacteria V Transport permease protein - - - - - - - - - - - - - WXD2_k127_2232218_0 1121920.AUAU01000004_gene856 2.022e-205 647.0 COG0065@1|root,COG0065@2|Bacteria 2|Bacteria E 3-isopropylmalate dehydratase activity hacA - 4.2.1.33,4.2.1.35 ko:K01703 ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 M00432,M00535 R03896,R03898,R03968,R04001,R08620,R08624,R08628,R08634,R08641,R08645,R10170 RC00497,RC00976,RC00977,RC01041,RC01046,RC03072 br01601,ko00000,ko00001,ko00002,ko01000 - - - Aconitase WXD2_k127_2232218_5 1121920.AUAU01000004_gene855 2.36e-58 207.0 COG0066@1|root,COG0066@2|Bacteria 2|Bacteria E 3-isopropylmalate dehydratase activity leuD - 4.2.1.33,4.2.1.35 ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R03896,R03898,R03968,R04001,R10170 RC00976,RC00977,RC01041,RC01046,RC03072 br01601,ko00000,ko00001,ko00002,ko01000 - - - Aconitase_C WXD2_k127_2232218_1 1121920.AUAU01000004_gene859 7.498e-176 565.0 COG0473@1|root,COG0473@2|Bacteria,3Y2VW@57723|Acidobacteria 57723|Acidobacteria CE Isocitrate/isopropylmalate dehydrogenase - - 1.1.1.85 ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R00994,R04426,R10052 RC00084,RC00417,RC03036 br01601,ko00000,ko00001,ko00002,ko01000 - - - Iso_dh WXD2_k127_2232218_4 1121920.AUAU01000004_gene858 1.104e-72 251.0 COG0119@1|root,COG0119@2|Bacteria,3Y2NJ@57723|Acidobacteria 57723|Acidobacteria E HMGL-like - - 4.1.3.4 ko:K01640 ko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146 M00036,M00088 R01360,R08090 RC00502,RC00503,RC01118,RC01946 ko00000,ko00001,ko00002,ko01000 - - - HMGL-like WXD2_k127_2254110_4 1283300.ATXB01000001_gene1777 0.0002434 53.0 COG2919@1|root,COG2919@2|Bacteria,1N7AA@1224|Proteobacteria,1SD8H@1236|Gammaproteobacteria,1XFRY@135618|Methylococcales 135618|Methylococcales D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic ftsB - - ko:K05589 - - - - ko00000,ko03036 - - - DivIC WXD2_k127_2254110_0 663278.Ethha_2687 4.016e-173 562.0 COG0015@1|root,COG0015@2|Bacteria,1TPMM@1239|Firmicutes,2485N@186801|Clostridia,3WG9P@541000|Ruminococcaceae 186801|Clostridia F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily purB - 4.3.2.2 ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048,M00049 R01083,R04559 RC00379,RC00444,RC00445 ko00000,ko00001,ko00002,ko01000 - - - ADSL_C,Lyase_1 WXD2_k127_2254110_2 545694.TREPR_2757 7.913e-32 135.0 COG0797@1|root,COG0797@2|Bacteria,2J8E5@203691|Spirochaetes 203691|Spirochaetes M Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides rlpA - - ko:K03642 - - - - ko00000 - - - DPBB_1,SPOR WXD2_k127_2254110_1 1453500.AT05_07045 9.239e-47 175.0 COG0105@1|root,COG0105@2|Bacteria,4NM5B@976|Bacteroidetes,1I1AD@117743|Flavobacteriia 976|Bacteroidetes F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate ndk - 2.7.4.6 ko:K00940 ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016 M00049,M00050,M00052,M00053 R00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895 RC00002 ko00000,ko00001,ko00002,ko01000,ko04131 - - - NDK WXD2_k127_2254110_3 525904.Tter_2563 6.182e-24 105.0 COG0642@1|root,COG3852@1|root,COG2205@2|Bacteria,COG3852@2|Bacteria,2NQNP@2323|unclassified Bacteria 2|Bacteria T Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - - - - - - - - - - GAF,GAF_2,GGDEF,HATPase_c,HisKA,HisKA_7TM,PAS,PAS_3,PAS_4,PAS_9,Response_reg WXD2_k127_2255510_0 1283299.AUKG01000003_gene204 1.051e-197 626.0 COG0372@1|root,COG0372@2|Bacteria,2GJ7E@201174|Actinobacteria,4CPID@84995|Rubrobacteria 84995|Rubrobacteria C Belongs to the citrate synthase family - - 2.3.3.1 ko:K01647 ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00740 R00351 RC00004,RC00067 br01601,ko00000,ko00001,ko00002,ko01000 - - - Citrate_synt WXD2_k127_2255510_2 1125863.JAFN01000001_gene3093 1.584e-33 138.0 COG1385@1|root,COG1385@2|Bacteria,1MXCU@1224|Proteobacteria,42R1A@68525|delta/epsilon subdivisions,2WMV6@28221|Deltaproteobacteria 28221|Deltaproteobacteria J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit rsmE - 2.1.1.193 ko:K09761 - - - - ko00000,ko01000,ko03009 - - - Methyltrans_RNA WXD2_k127_2255510_1 1123371.ATXH01000032_gene462 1.116e-80 284.0 COG0477@1|root,COG2814@2|Bacteria,2GHE9@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria EGP Acetyl-coenzyme A transporter 1 - - - ko:K08218 ko01501,map01501 M00628 - - ko00000,ko00001,ko00002,ko02000 2.A.1.25 - - MFS_1 WXD2_k127_2262487_1 880073.Calab_2181 6.786e-41 162.0 COG0535@1|root,COG0535@2|Bacteria,2NPKA@2323|unclassified Bacteria 2|Bacteria S Iron-sulfur cluster-binding domain - - - - - - - - - - - - Fer4_12,Fer4_14,Radical_SAM,SPASM WXD2_k127_2262487_0 641491.DND132_1483 1.103e-70 263.0 COG0438@1|root,COG0438@2|Bacteria,1N1RZ@1224|Proteobacteria,42UHY@68525|delta/epsilon subdivisions,2WQD7@28221|Deltaproteobacteria 28221|Deltaproteobacteria M Glycosyltransferase Family 4 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 WXD2_k127_2262487_2 1120968.AUBX01000015_gene3632 7.83e-09 64.0 COG0535@1|root,COG0535@2|Bacteria,4NGWY@976|Bacteroidetes,47K59@768503|Cytophagia 976|Bacteroidetes C Radical SAM - - - - - - - - - - - - Fer4_12,Radical_SAM,SPASM WXD2_k127_2262647_1 644966.Tmar_0865 1.911e-122 408.0 COG0769@1|root,COG0769@2|Bacteria,1TPQE@1239|Firmicutes,248Q4@186801|Clostridia,3WCXE@538999|Clostridiales incertae sedis 186801|Clostridia M to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan murE - 6.3.2.13 ko:K01928 ko00300,ko00550,map00300,map00550 - R02788 RC00064,RC00090 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M WXD2_k127_2262647_2 204669.Acid345_3633 8.666e-90 313.0 COG0770@1|root,COG0770@2|Bacteria,3Y3I2@57723|Acidobacteria,2JHW4@204432|Acidobacteriia 204432|Acidobacteriia M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein murF - 6.3.2.10 ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 - R04573,R04617 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M WXD2_k127_2262647_0 1122929.KB908217_gene273 1.302e-124 409.0 COG0472@1|root,COG0472@2|Bacteria,1MUTK@1224|Proteobacteria,2TRUG@28211|Alphaproteobacteria 28211|Alphaproteobacteria M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan mraY - 2.7.8.13 ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 - R05629,R05630 RC00002,RC02753 ko00000,ko00001,ko01000,ko01011 9.B.146 - - Glycos_transf_4,MraY_sig1 WXD2_k127_2262647_3 338963.Pcar_2204 1.222e-77 287.0 COG0771@1|root,COG0771@2|Bacteria,1MVYD@1224|Proteobacteria,42MJY@68525|delta/epsilon subdivisions,2WJAQ@28221|Deltaproteobacteria,43SC6@69541|Desulfuromonadales 28221|Deltaproteobacteria M Mur ligase middle domain murD - 6.3.2.9 ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 - R02783 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - AlaDh_PNT_C,FAD_binding_3,Mur_ligase_C,Mur_ligase_M,NAD_binding_8 WXD2_k127_2288614_5 1192034.CAP_8642 1.644e-45 187.0 297NQ@1|root,2ZUVN@2|Bacteria,1N1JM@1224|Proteobacteria,43EYZ@68525|delta/epsilon subdivisions,2X2P1@28221|Deltaproteobacteria,2YU8E@29|Myxococcales 28221|Deltaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_2288614_0 279714.FuraDRAFT_0071 1.575e-223 710.0 COG3158@1|root,COG3158@2|Bacteria,1MUVH@1224|Proteobacteria,2VH9I@28216|Betaproteobacteria,2KPED@206351|Neisseriales 206351|Neisseriales P Transport of potassium into the cell kup - - ko:K03549 - - - - ko00000,ko02000 2.A.72 - - K_trans WXD2_k127_2288614_2 365046.Rta_16960 1.13e-125 417.0 COG1502@1|root,COG1502@2|Bacteria,1MWUW@1224|Proteobacteria,2VKYV@28216|Betaproteobacteria,4AAM4@80864|Comamonadaceae 28216|Betaproteobacteria I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol - - - ko:K06131 ko00564,ko01100,map00564,map01100 - R07390 RC00017 ko00000,ko00001,ko01000 - - - PLDc_2 WXD2_k127_2288614_9 1408422.JHYF01000002_gene2435 9.18e-24 109.0 COG3568@1|root,COG3568@2|Bacteria,1V9H0@1239|Firmicutes,24KPC@186801|Clostridia 186801|Clostridia S PFAM Endonuclease Exonuclease phosphatase - - - - - - - - - - - - Exo_endo_phos WXD2_k127_2288614_3 383372.Rcas_0547 6.23e-71 257.0 COG0006@1|root,COG0006@2|Bacteria,2G5J6@200795|Chloroflexi 200795|Chloroflexi C Metallopeptidase family M24 - - 3.4.11.9 ko:K01262 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M24 WXD2_k127_2288614_7 1237149.C900_03646 7.88e-38 144.0 COG3118@1|root,COG3118@2|Bacteria,4NQ5B@976|Bacteroidetes,47QDT@768503|Cytophagia 976|Bacteroidetes O Belongs to the thioredoxin family trxA - - ko:K03671 ko04621,ko05418,map04621,map05418 - - - ko00000,ko00001,ko03110 - - - Thioredoxin WXD2_k127_2288614_11 518766.Rmar_0611 6.41e-11 72.0 COG1376@1|root,COG1376@2|Bacteria,4P35B@976|Bacteroidetes 976|Bacteroidetes S L,D-transpeptidase catalytic domain - - - - - - - - - - - - YkuD WXD2_k127_2288614_6 1379270.AUXF01000003_gene3469 2.948e-41 163.0 COG1376@1|root,COG1376@2|Bacteria,1ZUFC@142182|Gemmatimonadetes 142182|Gemmatimonadetes S L,D-transpeptidase catalytic domain - - - - - - - - - - - - YkuD WXD2_k127_2288614_10 521011.Mpal_0065 1.048e-20 99.0 COG0558@1|root,arCOG00670@2157|Archaea,2XWJ0@28890|Euryarchaeota,2N9N5@224756|Methanomicrobia 224756|Methanomicrobia I Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - 2.7.8.39,2.7.8.5 ko:K00995,ko:K17884 ko00564,ko01100,map00564,map01100 - R01801,R10464 RC00002,RC00017,RC00078,RC02795 ko00000,ko00001,ko01000 - - iAF692.Mbar_A1250 CDP-OH_P_transf WXD2_k127_2288614_8 237368.SCABRO_01416 6.419e-37 149.0 COG1085@1|root,COG1085@2|Bacteria,2IX2C@203682|Planctomycetes 203682|Planctomycetes C galactose-1-phosphate uridylyltransferase - - 2.7.7.12 ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 M00362,M00554,M00632 R00955 RC00002 ko00000,ko00001,ko00002,ko01000 - - - DUF4921,GalP_UDP_tr_C,GalP_UDP_transf WXD2_k127_2288614_4 102129.Lepto7375DRAFT_3011 6.5e-67 235.0 COG0705@1|root,COG0705@2|Bacteria,1FZY1@1117|Cyanobacteria,1H9IP@1150|Oscillatoriales 1117|Cyanobacteria S (Rhomboid) family - - - - - - - - - - - - Rhomboid WXD2_k127_2288614_1 234267.Acid_5939 8.804e-134 442.0 COG1807@1|root,COG1807@2|Bacteria,3Y383@57723|Acidobacteria 57723|Acidobacteria M Dolichyl-phosphate-mannose-protein mannosyltransferase - - - - - - - - - - - - PMT_2 WXD2_k127_2288912_10 1033734.CAET01000025_gene1102 3.375e-26 114.0 COG4194@1|root,COG4194@2|Bacteria,1V3Z3@1239|Firmicutes,4HHRK@91061|Bacilli,1ZG9F@1386|Bacillus 91061|Bacilli S Protein of unknown function (DUF1648) - - - - - - - - - - - - DUF1648 WXD2_k127_2288912_11 1047013.AQSP01000139_gene2408 1.69e-12 78.0 COG1664@1|root,COG1664@2|Bacteria 2|Bacteria M Polymer-forming cytoskeletal - - - - - - - - - - - - Bactofilin WXD2_k127_2288912_8 1379698.RBG1_1C00001G1704 5.685e-38 150.0 COG1595@1|root,COG1595@2|Bacteria,2NPRC@2323|unclassified Bacteria 2|Bacteria K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 WXD2_k127_2288912_3 96561.Dole_2132 1.951e-79 271.0 COG1131@1|root,COG1131@2|Bacteria,1MUX3@1224|Proteobacteria,42QN5@68525|delta/epsilon subdivisions,2WMD7@28221|Deltaproteobacteria,2MJC9@213118|Desulfobacterales 28221|Deltaproteobacteria V PFAM ABC transporter related - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran WXD2_k127_2288912_6 404589.Anae109_4214 1.078e-47 191.0 COG2890@1|root,COG2890@2|Bacteria,1MXCQ@1224|Proteobacteria,42PKA@68525|delta/epsilon subdivisions,2WNH0@28221|Deltaproteobacteria,2YVC9@29|Myxococcales 28221|Deltaproteobacteria J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif prmC GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 ko:K02493 - - R10806 RC00003,RC03279 ko00000,ko01000,ko03012 - - - MTS,Methyltransf_31 WXD2_k127_2288912_7 1192034.CAP_1885 8.512e-39 149.0 COG0537@1|root,COG0537@2|Bacteria,1RDCJ@1224|Proteobacteria,42SEH@68525|delta/epsilon subdivisions,2WQWW@28221|Deltaproteobacteria,2YW79@29|Myxococcales 28221|Deltaproteobacteria FG HIT domain hinT - - ko:K02503 - - - - ko00000,ko04147 - - - HIT WXD2_k127_2288912_5 886293.Sinac_0418 5.382e-77 281.0 COG0628@1|root,COG0628@2|Bacteria,2IXF5@203682|Planctomycetes 203682|Planctomycetes S AI-2E family transporter - - - - - - - - - - - - AI-2E_transport WXD2_k127_2288912_0 671143.DAMO_0707 8.683e-188 608.0 COG1003@1|root,COG1003@2|Bacteria,2NNSG@2323|unclassified Bacteria 2|Bacteria E The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor gcvPB - 1.4.4.2 ko:K00283 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 - R01221,R03425 RC00022,RC00929,RC02834,RC02880 ko00000,ko00001,ko01000 - - - Aminotran_5,GDC-P WXD2_k127_2288912_2 1329516.JPST01000003_gene1025 1.092e-122 409.0 COG0403@1|root,COG0403@2|Bacteria,1TQGG@1239|Firmicutes,4HA7P@91061|Bacilli,27BBJ@186824|Thermoactinomycetaceae 91061|Bacilli E Glycine cleavage system P-protein gcvPA - 1.4.4.2 ko:K00282 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 - R01221,R03425 RC00022,RC00929,RC02834,RC02880 ko00000,ko00001,ko01000 - - - GDC-P WXD2_k127_2288912_9 234267.Acid_0483 3.252e-37 158.0 COG0509@1|root,COG0509@2|Bacteria,3Y55C@57723|Acidobacteria 57723|Acidobacteria E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein gcvH - - ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 M00532 R01221 RC00022,RC02834 ko00000,ko00001,ko00002 - - - GCV_H WXD2_k127_2288912_1 871963.Desdi_2783 4.012e-124 409.0 COG0404@1|root,COG0404@2|Bacteria,1TRKX@1239|Firmicutes,248U7@186801|Clostridia,261AX@186807|Peptococcaceae 186801|Clostridia E The glycine cleavage system catalyzes the degradation of glycine gcvT - 2.1.2.10 ko:K00605 ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200 M00532 R01221,R02300,R04125 RC00022,RC00069,RC00183,RC02834 ko00000,ko00001,ko00002,ko01000 - - - GCV_T,GCV_T_C WXD2_k127_2288912_4 1121428.DESHY_80117___1 4.593e-78 273.0 COG4974@1|root,COG4974@2|Bacteria,1TPQB@1239|Firmicutes,25C3N@186801|Clostridia,260TU@186807|Peptococcaceae 186801|Clostridia D Belongs to the 'phage' integrase family. XerC subfamily xerC - - ko:K03733,ko:K04763 - - - - ko00000,ko03036 - - - Phage_int_SAM_1,Phage_integrase WXD2_k127_229409_0 485915.Dret_0521 6.769e-138 447.0 COG0343@1|root,COG0343@2|Bacteria,1MUCA@1224|Proteobacteria,42M5Y@68525|delta/epsilon subdivisions,2WIMT@28221|Deltaproteobacteria,2M9GZ@213115|Desulfovibrionales 28221|Deltaproteobacteria J Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) tgt - 2.4.2.29 ko:K00773 - - R03789,R10209 RC00063 ko00000,ko01000,ko03016 - - - TGT WXD2_k127_229409_3 545695.TREAZ_3376 2.276e-21 97.0 COG1862@1|root,COG1862@2|Bacteria,2J8D6@203691|Spirochaetes 203691|Spirochaetes U Preprotein translocase, YajC subunit yajC - - ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 - - YajC WXD2_k127_229409_1 204669.Acid345_0146 1.406e-131 437.0 COG0342@1|root,COG0342@2|Bacteria,3Y37S@57723|Acidobacteria,2JHJC@204432|Acidobacteriia 204432|Acidobacteriia U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA secD - - ko:K03072 ko03060,ko03070,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 2.A.6.4,3.A.5.2,3.A.5.7 - - SecD_SecF,Sec_GG WXD2_k127_229409_2 204669.Acid345_0147 6.665e-65 237.0 COG0341@1|root,COG0341@2|Bacteria,3Y2ZT@57723|Acidobacteria,2JHZF@204432|Acidobacteriia 204432|Acidobacteriia U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA secF - - ko:K03074 ko03060,ko03070,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 2.A.6.4,3.A.5.2,3.A.5.7 - - SecD_SecF,Sec_GG WXD2_k127_2305127_2 1242864.D187_002766 1.61e-44 182.0 COG0652@1|root,COG1413@1|root,COG0652@2|Bacteria,COG1413@2|Bacteria,1R4KH@1224|Proteobacteria,42R08@68525|delta/epsilon subdivisions,2WWSG@28221|Deltaproteobacteria 28221|Deltaproteobacteria O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides - - 5.2.1.8 ko:K03768 - - - - ko00000,ko01000,ko03110 - - - HEAT_2,Pro_isomerase WXD2_k127_2305127_0 1032480.MLP_13840 1.439e-80 282.0 COG1052@1|root,COG1052@2|Bacteria,2I2RK@201174|Actinobacteria,4DWPF@85009|Propionibacteriales 201174|Actinobacteria CH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - 1.1.1.26 ko:K00015 ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120 - R00717,R01388 RC00031,RC00042 ko00000,ko00001,ko01000 - - - 2-Hacid_dh,2-Hacid_dh_C WXD2_k127_2305127_3 340177.Cag_0168 2.655e-44 167.0 COG1335@1|root,COG1335@2|Bacteria,1FE0F@1090|Chlorobi 1090|Chlorobi Q PFAM isochorismatase hydrolase - - - - - - - - - - - - Isochorismatase WXD2_k127_2305127_4 215803.DB30_5841 6.666e-27 112.0 COG4095@1|root,COG4095@2|Bacteria,1NFJU@1224|Proteobacteria,434KW@68525|delta/epsilon subdivisions,2WYYA@28221|Deltaproteobacteria,2YVSM@29|Myxococcales 28221|Deltaproteobacteria S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - WXD2_k127_2305127_1 1121920.AUAU01000022_gene2445 1.135e-57 212.0 COG0697@1|root,COG0697@2|Bacteria,3Y570@57723|Acidobacteria 57723|Acidobacteria EG EamA-like transporter family - - - - - - - - - - - - EamA WXD2_k127_2305127_5 1122939.ATUD01000007_gene2122 2.398e-13 81.0 COG1012@1|root,COG1012@2|Bacteria,2GIWZ@201174|Actinobacteria,4CPKM@84995|Rubrobacteria 84995|Rubrobacteria C Belongs to the aldehyde dehydrogenase family - - 1.2.1.39,1.2.1.99 ko:K00146,ko:K09472 ko00330,ko00360,ko00643,ko01100,ko01120,map00330,map00360,map00643,map01100,map01120 M00136 R02536,R07417,R07418 RC00080 ko00000,ko00001,ko00002,ko01000 - - - Aldedh WXD2_k127_2315465_4 290397.Adeh_1128 3.661e-14 76.0 COG0697@1|root,COG0697@2|Bacteria,1MX1Y@1224|Proteobacteria,42NTW@68525|delta/epsilon subdivisions,2WMEN@28221|Deltaproteobacteria 28221|Deltaproteobacteria EG EamA-like transporter family - - - - - - - - - - - - EamA WXD2_k127_2315465_1 382464.ABSI01000020_gene129 1.522e-41 160.0 COG0454@1|root,COG0456@2|Bacteria 2|Bacteria K acetyltransferase - - - - - - - - - - - - Acetyltransf_1 WXD2_k127_2315465_0 376686.Fjoh_2012 3.111e-155 524.0 COG0612@1|root,COG0612@2|Bacteria,4NEDZ@976|Bacteroidetes,1HYRS@117743|Flavobacteriia,2NSP5@237|Flavobacterium 976|Bacteroidetes S Belongs to the peptidase M16 family - - - ko:K07263 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M16,Peptidase_M16_C WXD2_k127_2315465_3 234267.Acid_0996 1.596e-25 119.0 COG2227@1|root,COG2227@2|Bacteria 2|Bacteria H 3-demethylubiquinone-9 3-O-methyltransferase activity - - - - - - - - - - - - Methyltransf_11,Methyltransf_25,Methyltransf_31,TehB WXD2_k127_2315465_5 1237149.C900_05652 2.003e-09 66.0 COG1225@1|root,COG1225@2|Bacteria,4NNGK@976|Bacteroidetes,47PUA@768503|Cytophagia 976|Bacteroidetes O PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen bcp - 1.11.1.15 ko:K03564 - - - - ko00000,ko01000 - - - AhpC-TSA WXD2_k127_2315465_2 1144275.COCOR_06922 3.674e-30 121.0 COG1225@1|root,COG1225@2|Bacteria,1PEII@1224|Proteobacteria,43434@68525|delta/epsilon subdivisions,2X503@28221|Deltaproteobacteria,2YZX7@29|Myxococcales 28221|Deltaproteobacteria O Redoxin - - 1.11.1.15 ko:K03564 - - - - ko00000,ko01000 - - - AhpC-TSA WXD2_k127_2319778_6 1230476.C207_05930 1.463e-35 148.0 COG1181@1|root,COG1181@2|Bacteria,1N4F5@1224|Proteobacteria,2U1M9@28211|Alphaproteobacteria,3JWED@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria M Belongs to the D-alanine--D-alanine ligase family - - 6.3.2.4 ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 - R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Dala_Dala_lig_C,Methyltransf_25 WXD2_k127_2319778_5 330214.NIDE0474 1.185e-62 237.0 COG1181@1|root,COG1181@2|Bacteria 2|Bacteria F Belongs to the D-alanine--D-alanine ligase family ddlB1 - 6.3.2.4,6.3.5.5 ko:K01921,ko:K01955 ko00240,ko00250,ko00473,ko00550,ko01100,ko01502,map00240,map00250,map00473,map00550,map01100,map01502 M00051 R00256,R00575,R01150,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC00064,RC00141,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000,ko01011 - - - Dala_Dala_lig_C WXD2_k127_2319778_0 443598.AUFA01000003_gene2112 3.436e-118 409.0 COG4307@1|root,COG4307@2|Bacteria,1MXES@1224|Proteobacteria,2U06R@28211|Alphaproteobacteria,3JRXQ@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria S Putative zinc-binding metallo-peptidase - - - - - - - - - - - - Peptidase_Mx WXD2_k127_2319778_1 1278073.MYSTI_02808 3.73e-118 389.0 COG3342@1|root,COG3342@2|Bacteria,1MWQT@1224|Proteobacteria 1224|Proteobacteria S major pilin protein fima MA20_16755 - - - - - - - - - - - DUF1028 WXD2_k127_2319778_4 234267.Acid_0825 2.212e-78 282.0 COG3746@1|root,COG3746@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_2319778_2 1379698.RBG1_1C00001G0108 2.234e-101 340.0 COG0803@1|root,COG0803@2|Bacteria,2NPH3@2323|unclassified Bacteria 2|Bacteria P Belongs to the bacterial solute-binding protein 9 family znuA - - ko:K02077,ko:K09815,ko:K09818 ko02010,map02010 M00242,M00243,M00244 - - ko00000,ko00001,ko00002,ko02000 3.A.1.15,3.A.1.15.3,3.A.1.15.5 - - ZnuA WXD2_k127_2319778_3 234267.Acid_0827 3.324e-93 319.0 COG1108@1|root,COG1108@2|Bacteria,3Y93X@57723|Acidobacteria 57723|Acidobacteria P ABC 3 transport family - - - ko:K02075 - M00244 - - ko00000,ko00002,ko02000 3.A.1.15 - - ABC-3 WXD2_k127_232003_7 411467.BACCAP_04464 1.017e-14 76.0 2EPJ6@1|root,33H5U@2|Bacteria 2|Bacteria S Unextendable partial coding region - - - - - - - - - - - - - WXD2_k127_232003_9 1278073.MYSTI_07079 0.0003846 53.0 2AQ29@1|root,31F7C@2|Bacteria,1NHC1@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - WXD2_k127_232003_2 509190.Cseg_1873 1.017e-91 306.0 COG0176@1|root,COG0176@2|Bacteria,1QAUK@1224|Proteobacteria 1224|Proteobacteria H Transaldolase tal - 2.2.1.2 ko:K00616 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007 R01827 RC00439,RC00604 ko00000,ko00001,ko00002,ko01000 - - - TAL_FSA WXD2_k127_232003_1 1047013.AQSP01000144_gene843 9.861e-98 340.0 COG2605@1|root,COG2605@2|Bacteria,2NP6Q@2323|unclassified Bacteria 2|Bacteria S GHMP kinases C terminal - - 2.7.1.168 ko:K07031 ko00540,map00540 - R09770 RC00002,RC00078 ko00000,ko00001,ko01000 - - - GHMP_kinases_C,GHMP_kinases_N WXD2_k127_232003_0 70601.3256828 2.086e-109 383.0 COG1232@1|root,arCOG01522@2157|Archaea,2XY37@28890|Euryarchaeota 28890|Euryarchaeota H PFAM amine oxidase - - - - - - - - - - - - Amino_oxidase WXD2_k127_232003_5 448385.sce3600 3.985e-45 174.0 COG0463@1|root,COG2227@1|root,COG0463@2|Bacteria,COG2227@2|Bacteria,1NBIU@1224|Proteobacteria 1224|Proteobacteria H PFAM Methyltransferase type - - - - - - - - - - - - Glyco_trans_1_2,Methyltransf_23 WXD2_k127_232003_4 909663.KI867150_gene209 3.744e-68 243.0 COG0463@1|root,COG0463@2|Bacteria,1PKN9@1224|Proteobacteria,43033@68525|delta/epsilon subdivisions,2WVDA@28221|Deltaproteobacteria 28221|Deltaproteobacteria M Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 WXD2_k127_232003_6 36809.MAB_3611c 5.953e-30 134.0 COG1208@1|root,COG1208@2|Bacteria,2GKTE@201174|Actinobacteria,235M9@1762|Mycobacteriaceae 201174|Actinobacteria JM Nucleotidyl transferase manC - 2.7.7.13 ko:K00966 ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110 M00114,M00361,M00362 R00885 RC00002 ko00000,ko00001,ko00002,ko01000 - - - Hexapep,NTP_transferase WXD2_k127_232003_3 673860.AciM339_0904 1.698e-71 252.0 COG0451@1|root,arCOG01369@2157|Archaea,2XTRS@28890|Euryarchaeota,3F37Q@33867|unclassified Euryarchaeota 28890|Euryarchaeota M NAD(P)H-binding - - 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 - - - Epimerase WXD2_k127_2329109_3 324602.Caur_0649 3.473e-63 242.0 COG1404@1|root,COG4447@1|root,COG1404@2|Bacteria,COG4447@2|Bacteria,2G8UU@200795|Chloroflexi,3759F@32061|Chloroflexia 32061|Chloroflexia O PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - - - - - - - - - - Kelch_4,Kelch_5,Peptidase_S8 WXD2_k127_2329109_1 134676.ACPL_7754 3.786e-114 376.0 COG0274@1|root,COG0274@2|Bacteria,2GJIR@201174|Actinobacteria,4DADZ@85008|Micromonosporales 201174|Actinobacteria F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate deoC - 4.1.2.4 ko:K01619 ko00030,map00030 - R01066 RC00436,RC00437 ko00000,ko00001,ko01000 - - - DeoC WXD2_k127_2329109_0 1254432.SCE1572_30430 4.073e-225 723.0 COG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,42N0C@68525|delta/epsilon subdivisions,2X250@28221|Deltaproteobacteria,2YXZE@29|Myxococcales 28221|Deltaproteobacteria C Belongs to the aldehyde dehydrogenase family - - 1.2.1.3 ko:K00128 ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130 M00135 R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146 RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500 ko00000,ko00001,ko00002,ko01000 - - - Aldedh WXD2_k127_2329109_2 58123.JOFJ01000004_gene1873 1.429e-99 332.0 COG1012@1|root,COG1012@2|Bacteria,2GKSN@201174|Actinobacteria,4EHBQ@85012|Streptosporangiales 201174|Actinobacteria C Aldehyde dehydrogenase family - - 1.2.1.3 ko:K00128 ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130 M00135 R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146 RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500 ko00000,ko00001,ko00002,ko01000 - - - Aldedh WXD2_k127_2342265_3 335543.Sfum_2204 6.924e-41 163.0 COG2208@1|root,COG2770@1|root,COG2208@2|Bacteria,COG2770@2|Bacteria,1MXJQ@1224|Proteobacteria,42MFQ@68525|delta/epsilon subdivisions,2WIJ4@28221|Deltaproteobacteria,2MQDN@213462|Syntrophobacterales 28221|Deltaproteobacteria KT Stage II sporulation - - 3.1.3.3 ko:K07315 - - - - ko00000,ko01000,ko03021 - - - HAMP,SpoIIE,dCache_1 WXD2_k127_2342265_6 1117318.PRUB_11941 6.763e-29 134.0 COG1629@1|root,COG4771@2|Bacteria,1RAXV@1224|Proteobacteria,1S3M5@1236|Gammaproteobacteria,2Q4EF@267888|Pseudoalteromonadaceae 1236|Gammaproteobacteria P COG1629 Outer membrane receptor proteins, mostly Fe transport - - - ko:K02014,ko:K16087 - - - - ko00000,ko02000 1.B.14,1.B.14.2 - - Plug,TonB_dep_Rec WXD2_k127_2342265_4 1132442.KB889752_gene224 4.13e-39 156.0 COG0741@1|root,COG0741@2|Bacteria,1V6DD@1239|Firmicutes,4HIWA@91061|Bacilli,1ZH33@1386|Bacillus 91061|Bacilli M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) yjbJ - - - - - - - - - - - SLT WXD2_k127_2342265_2 292459.STH1821 2.117e-87 299.0 COG4974@1|root,COG4974@2|Bacteria,1TQRG@1239|Firmicutes,247QQ@186801|Clostridia 186801|Clostridia L Belongs to the 'phage' integrase family xerD - - ko:K04763 - - - - ko00000,ko03036 - - - Phage_int_SAM_1,Phage_integrase WXD2_k127_2342265_0 234267.Acid_1501 9.972e-92 310.0 COG0320@1|root,COG0320@2|Bacteria,3Y6DY@57723|Acidobacteria 57723|Acidobacteria H Elongator protein 3, MiaB family, Radical SAM - - 2.8.1.8 ko:K03644 ko00785,ko01100,map00785,map01100 - R07767,R07768 RC01978 ko00000,ko00001,ko01000 - - - LIAS_N,Radical_SAM WXD2_k127_2342265_5 204669.Acid345_0553 2.089e-35 141.0 COG1329@1|root,COG1329@2|Bacteria,3Y4ZG@57723|Acidobacteria,2JMXA@204432|Acidobacteriia 204432|Acidobacteriia K CarD-like/TRCF domain - - - ko:K07736 - - - - ko00000,ko03000 - - - CarD_CdnL_TRCF WXD2_k127_2342265_1 235909.GK2314 1.509e-90 305.0 COG1015@1|root,COG1015@2|Bacteria,1TP70@1239|Firmicutes,4H9RU@91061|Bacilli,1WE37@129337|Geobacillus 91061|Bacilli G Phosphotransfer between the C1 and C5 carbon atoms of pentose deoB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008973,GO:0009987,GO:0016853,GO:0016866,GO:0016868,GO:0034641,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360 5.4.2.7 ko:K01839 ko00030,ko00230,map00030,map00230 - R01057,R02749 RC00408 ko00000,ko00001,ko01000 - - - Metalloenzyme WXD2_k127_2348790_5 234267.Acid_0899 3.558e-11 74.0 COG4219@1|root,COG4219@2|Bacteria,3Y4QS@57723|Acidobacteria 2|Bacteria KT Peptidase M56, BlaR1 - - - - - - - - - - - - Peptidase_M56,TonB_C WXD2_k127_2348790_0 118005.AWNK01000003_gene2179 3.249e-257 805.0 COG0481@1|root,COG0481@2|Bacteria 2|Bacteria M GTPase activity lepA GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0006950,GO:0006970,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009268,GO:0009409,GO:0009628,GO:0009651,GO:0009987,GO:0010467,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0042802,GO:0043021,GO:0043023,GO:0043024,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0050896,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - ko:K03596 ko05134,map05134 - - - ko00000,ko00001 - - - EFG_C,GTP_EFTU,GTP_EFTU_D2,LepA_C WXD2_k127_2348790_2 1303692.SFUL_1999 2.711e-33 134.0 COG1366@1|root,COG1366@2|Bacteria,2H996@201174|Actinobacteria 201174|Actinobacteria T STAS domain - - - ko:K04749 - - - - ko00000,ko03021 - - - STAS WXD2_k127_2348790_4 378806.STAUR_7590 1.127e-28 133.0 COG2172@1|root,COG2172@2|Bacteria 2|Bacteria T sigma factor antagonist activity - - 2.7.11.1 ko:K04757,ko:K17752 - - - - ko00000,ko01000,ko01001,ko03021 - - - HATPase_c_2,SpoIIE WXD2_k127_2348790_3 497964.CfE428DRAFT_1204 6.883e-31 136.0 COG2856@1|root,COG2856@2|Bacteria,46W5X@74201|Verrucomicrobia 74201|Verrucomicrobia E Zn peptidase - - - - - - - - - - - - - WXD2_k127_2348790_1 316067.Geob_2508 1.84e-85 293.0 COG0709@1|root,COG0709@2|Bacteria,1MWFG@1224|Proteobacteria,42MC3@68525|delta/epsilon subdivisions,2WK3M@28221|Deltaproteobacteria 28221|Deltaproteobacteria F Synthesizes selenophosphate from selenide and ATP selD - 2.7.9.3 ko:K01008 ko00450,ko01100,map00450,map01100 - R03595 RC00002,RC02878 ko00000,ko00001,ko01000,ko03016 - - - AIRS,AIRS_C WXD2_k127_2349099_0 1121920.AUAU01000018_gene1806 7.667e-151 486.0 COG0332@1|root,COG0332@2|Bacteria,3Y2Z5@57723|Acidobacteria 2|Bacteria I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids fabH - 2.3.1.180,2.3.1.262 ko:K00648,ko:K18003 ko00061,ko00405,ko01100,ko01130,ko01212,ko02024,ko02025,map00061,map00405,map01100,map01130,map01212,map02024,map02025 M00082,M00083 R10707,R11586,R11587,R11588 RC00004,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - ACP_syn_III,ACP_syn_III_C WXD2_k127_2349099_1 1121015.N789_13960 4.849e-91 310.0 COG2199@1|root,COG3706@2|Bacteria,1NC00@1224|Proteobacteria,1RR2D@1236|Gammaproteobacteria,1XCCU@135614|Xanthomonadales 135614|Xanthomonadales T diguanylate cyclase - - - - - - - - - - - - GGDEF WXD2_k127_2349099_3 1411123.JQNH01000001_gene1879 1.122e-38 150.0 COG0727@1|root,COG0727@2|Bacteria,1N5PC@1224|Proteobacteria,2UFEE@28211|Alphaproteobacteria 28211|Alphaproteobacteria S Putative zinc- or iron-chelating domain - - - ko:K06940 - - - - ko00000 - - - CxxCxxCC WXD2_k127_2349099_6 867845.KI911784_gene1463 9.145e-09 66.0 COG1840@1|root,COG2304@1|root,COG1840@2|Bacteria,COG2304@2|Bacteria,2G8ES@200795|Chloroflexi,3759V@32061|Chloroflexia 32061|Chloroflexia P PFAM von Willebrand factor type A - - - ko:K07114 - - - - ko00000,ko02000 1.A.13.2.2,1.A.13.2.3 - - SBP_bac_11,VWA WXD2_k127_2349099_5 69395.JQLZ01000001_gene3230 2.614e-30 134.0 COG2885@1|root,COG2885@2|Bacteria,1RDG7@1224|Proteobacteria,2U8K5@28211|Alphaproteobacteria,2KGIE@204458|Caulobacterales 204458|Caulobacterales M Belongs to the ompA family - - - - - - - - - - - - OmpA WXD2_k127_2349099_2 290397.Adeh_0431 7.796e-91 307.0 COG0708@1|root,COG0708@2|Bacteria,1MVII@1224|Proteobacteria,42NY7@68525|delta/epsilon subdivisions,2WIXK@28221|Deltaproteobacteria,2Z364@29|Myxococcales 28221|Deltaproteobacteria L Endonuclease/Exonuclease/phosphatase family - - 3.1.11.2 ko:K01142 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Exo_endo_phos WXD2_k127_2350830_2 749927.AMED_7348 2.735e-08 61.0 COG4886@1|root,COG4886@2|Bacteria,2HDUD@201174|Actinobacteria 201174|Actinobacteria S Leucine-rich repeat (LRR) protein - - - - - - - - - - - - - WXD2_k127_2350830_0 269799.Gmet_2293 1.178e-205 653.0 COG0516@1|root,COG0517@1|root,COG0516@2|Bacteria,COG0517@2|Bacteria,1MUJM@1224|Proteobacteria,42M2M@68525|delta/epsilon subdivisions,2WJ5H@28221|Deltaproteobacteria,43TA3@69541|Desulfuromonadales 28221|Deltaproteobacteria F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth guaB - 1.1.1.205 ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 M00050 R01130,R08240 RC00143,RC02207 ko00000,ko00001,ko00002,ko01000,ko04147 - - - CBS,IMPDH,NMO WXD2_k127_2350830_1 247490.KSU1_C1537 1.099e-28 122.0 COG2027@1|root,COG2027@2|Bacteria,2IYAC@203682|Planctomycetes 203682|Planctomycetes M D-Ala-D-Ala carboxypeptidase 3 (S13) family - - 3.4.16.4 ko:K07259 ko00550,map00550 - - - ko00000,ko00001,ko01000,ko01002,ko01011 - - - Peptidase_S13 WXD2_k127_2351925_3 1089544.KB912942_gene4799 5.708e-11 76.0 COG0760@1|root,COG0760@2|Bacteria,2IGXV@201174|Actinobacteria,4EA9Z@85010|Pseudonocardiales 201174|Actinobacteria O PPIC-type PPIASE domain - - 5.2.1.8 ko:K03769,ko:K07533 - - - - ko00000,ko01000,ko03110 - - - Rotamase,Rotamase_2,Rotamase_3,SurA_N_3 WXD2_k127_2351925_2 667014.Thein_1029 6.631e-21 104.0 COG0760@1|root,COG0760@2|Bacteria,2GHMC@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria O PPIC-type PPIASE domain - - 5.2.1.8 ko:K03769 - - - - ko00000,ko01000,ko03110 - - - Rotamase_3 WXD2_k127_2351925_0 204669.Acid345_4549 2.82e-286 919.0 COG1197@1|root,COG1197@2|Bacteria,3Y3IE@57723|Acidobacteria,2JIHQ@204432|Acidobacteriia 204432|Acidobacteriia L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site mfd - - ko:K03723 ko03420,map03420 - - - ko00000,ko00001,ko01000,ko03400 - - - CarD_CdnL_TRCF,DEAD,Helicase_C,TRCF WXD2_k127_2351925_1 1267535.KB906767_gene4448 3.334e-22 109.0 COG2304@1|root,COG2304@2|Bacteria,3Y30G@57723|Acidobacteria,2JIK2@204432|Acidobacteriia 204432|Acidobacteriia S PFAM von Willebrand factor type A - - - - - - - - - - - - VWA,VWA_2,VWA_3 WXD2_k127_2354497_5 439235.Dalk_1630 2.326e-30 122.0 COG1146@1|root,COG1146@2|Bacteria,1N0QV@1224|Proteobacteria,42U2Z@68525|delta/epsilon subdivisions,2WR58@28221|Deltaproteobacteria,2MM2N@213118|Desulfobacterales 28221|Deltaproteobacteria C 4Fe-4S dicluster domain - - 1.2.7.3 ko:K00176 ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200 M00009,M00011,M00173,M00620 R01197 RC00004,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - Fer4,Fer4_4,Fer4_7 WXD2_k127_2354497_0 234267.Acid_6988 5.157e-161 516.0 COG0674@1|root,COG0674@2|Bacteria 2|Bacteria C oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor - - 1.2.7.11,1.2.7.3 ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - PFOR_II,POR_N WXD2_k127_2354497_2 404589.Anae109_1895 3.978e-109 368.0 COG1013@1|root,COG1013@2|Bacteria,1R5BF@1224|Proteobacteria,42MD3@68525|delta/epsilon subdivisions,2WJQ0@28221|Deltaproteobacteria 28221|Deltaproteobacteria C PFAM Thiamine pyrophosphate korB - 1.2.7.11,1.2.7.3 ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C WXD2_k127_2354497_4 404589.Anae109_1896 1.732e-47 180.0 COG1014@1|root,COG1014@2|Bacteria,1R8XG@1224|Proteobacteria,42NPD@68525|delta/epsilon subdivisions,2WMQ1@28221|Deltaproteobacteria 28221|Deltaproteobacteria C PFAM pyruvate ferredoxin flavodoxin oxidoreductase - - 1.2.7.3 ko:K00177 ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200 M00009,M00011,M00173,M00620 R01197 RC00004,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - POR WXD2_k127_2354497_1 1121396.KB893100_gene4319 9.645e-110 389.0 COG0493@1|root,COG1148@1|root,COG0493@2|Bacteria,COG1148@2|Bacteria,1QUM4@1224|Proteobacteria,42MPP@68525|delta/epsilon subdivisions,2WJ3U@28221|Deltaproteobacteria,2MIA4@213118|Desulfobacterales 28221|Deltaproteobacteria C Pyridine nucleotide-disulphide oxidoreductase - - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 ko:K03388 ko00680,ko01100,ko01120,ko01200,map00680,map01100,map01120,map01200 M00356,M00357,M00563,M00567 R04540,R11928,R11931,R11943,R11944 RC00011 ko00000,ko00001,ko00002,ko01000 - - - Fer4,Fer4_20,Fer4_7,Pyr_redox_2 WXD2_k127_2354497_3 1265505.ATUG01000001_gene3591 8.549e-65 239.0 COG0247@1|root,COG0247@2|Bacteria,1R8YC@1224|Proteobacteria,42NJW@68525|delta/epsilon subdivisions,2WIX1@28221|Deltaproteobacteria,2MIBB@213118|Desulfobacterales 28221|Deltaproteobacteria C 4Fe-4S dicluster domain - - - - - - - - - - - - CCG,Fer4_8,Fer4_9,FlpD WXD2_k127_2362191_2 1288963.ADIS_2314 0.0001227 51.0 COG0664@1|root,COG0664@2|Bacteria,4NFB1@976|Bacteroidetes,47JY7@768503|Cytophagia 976|Bacteroidetes K Transcriptional regulator, Crp Fnr family - - - ko:K01420 - - - - ko00000,ko03000 - - - HTH_Crp_2,cNMP_binding WXD2_k127_2362191_1 1380347.JNII01000008_gene4221 2.605e-38 164.0 COG4759@1|root,COG4759@2|Bacteria,2GRSQ@201174|Actinobacteria,4ESKP@85013|Frankiales 201174|Actinobacteria O Sucrase/ferredoxin-like - - - - - - - - - - - - Suc_Fer-like WXD2_k127_2362191_0 1179773.BN6_63460 5.648e-80 281.0 COG2850@1|root,COG2850@2|Bacteria,2GMR2@201174|Actinobacteria,4DYRP@85010|Pseudonocardiales 201174|Actinobacteria S Cupin superfamily protein - - - - - - - - - - - - Cupin_4 WXD2_k127_2362664_2 1144275.COCOR_03849 1.451e-61 214.0 COG0113@1|root,COG0113@2|Bacteria,1MWMW@1224|Proteobacteria,42N17@68525|delta/epsilon subdivisions,2WJE8@28221|Deltaproteobacteria,2YTTT@29|Myxococcales 28221|Deltaproteobacteria H Belongs to the ALAD family hemB - 4.2.1.24 ko:K01698 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R00036 RC00918,RC01781 ko00000,ko00001,ko00002,ko01000,ko04147 - - - ALAD WXD2_k127_2362664_4 1247726.MIM_c18550 2.84e-08 64.0 COG0316@1|root,COG0316@2|Bacteria,1RH6T@1224|Proteobacteria,2VSKY@28216|Betaproteobacteria,3T45X@506|Alcaligenaceae 28216|Betaproteobacteria S Belongs to the HesB IscA family iscA - - ko:K13628 - - - - ko00000,ko03016 - - - Fe-S_biosyn WXD2_k127_2362664_3 1122983.BAJY01000013_gene779 5.552e-12 74.0 COG2871@1|root,COG2871@2|Bacteria,4NFKC@976|Bacteroidetes,2FN44@200643|Bacteroidia 976|Bacteroidetes C NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway nqrF - 1.6.5.8 ko:K00351 - - - - ko00000,ko01000 - - - FAD_binding_6,Fer2,NAD_binding_1 WXD2_k127_2362664_0 266117.Rxyl_2548 5.405e-96 323.0 COG0320@1|root,COG0320@2|Bacteria,2GKD4@201174|Actinobacteria,4CPF1@84995|Rubrobacteria 84995|Rubrobacteria H Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives lipA - 2.8.1.8 ko:K03644 ko00785,ko01100,map00785,map01100 - R07767,R07768 RC01978 ko00000,ko00001,ko01000 - - - LIAS_N,Radical_SAM WXD2_k127_2362664_1 1242864.D187_009909 2.023e-87 302.0 COG0321@1|root,COG1051@1|root,COG0321@2|Bacteria,COG1051@2|Bacteria,1MU6A@1224|Proteobacteria,42RIC@68525|delta/epsilon subdivisions,2WPRF@28221|Deltaproteobacteria,2YVCE@29|Myxococcales 28221|Deltaproteobacteria H Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate lipB - 2.3.1.181 ko:K03801 ko00785,ko01100,map00785,map01100 - R07766,R07769 RC00039,RC00992,RC02867 ko00000,ko00001,ko01000 - - - BPL_LplA_LipB,NUDIX WXD2_k127_236887_5 215803.DB30_7380 0.0001634 55.0 COG1404@1|root,COG4412@1|root,COG1404@2|Bacteria,COG4412@2|Bacteria,1REF1@1224|Proteobacteria,42Q4N@68525|delta/epsilon subdivisions,2WS51@28221|Deltaproteobacteria,2YWNR@29|Myxococcales 28221|Deltaproteobacteria O Fibronectin type 3 domain - - - - - - - - - - - - Peptidase_M6,Peptidase_S8 WXD2_k127_236887_1 926569.ANT_06290 9.748e-118 387.0 COG0451@1|root,COG0451@2|Bacteria,2G7M6@200795|Chloroflexi 200795|Chloroflexi GM Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction fcl - 1.1.1.271 ko:K02377 ko00051,ko00520,ko01100,map00051,map00520,map01100 - R05692 RC01014 ko00000,ko00001,ko01000 - - - Epimerase WXD2_k127_236887_0 665571.STHERM_c15740 8.164e-152 486.0 COG1089@1|root,COG1089@2|Bacteria,2J78G@203691|Spirochaetes 203691|Spirochaetes M Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose gmd - 4.2.1.47 ko:K01711 ko00051,ko00520,ko01100,map00051,map00520,map01100 - R00888 RC00402 ko00000,ko00001,ko01000 - - - GDP_Man_Dehyd WXD2_k127_236887_4 177439.DP0052 1.713e-26 125.0 2EDPJ@1|root,337J9@2|Bacteria,1N7CD@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - WXD2_k127_236887_3 754476.Q7A_1086 8.978e-34 136.0 COG1846@1|root,COG1846@2|Bacteria,1N0TY@1224|Proteobacteria,1SADN@1236|Gammaproteobacteria,463BK@72273|Thiotrichales 72273|Thiotrichales K Transcriptional regulator - - - - - - - - - - - - HTH_24 WXD2_k127_236887_2 1200792.AKYF01000018_gene5832 1.9e-90 302.0 COG0451@1|root,COG0451@2|Bacteria,1VP6I@1239|Firmicutes,4HAN7@91061|Bacilli,26V0R@186822|Paenibacillaceae 91061|Bacilli M Polysaccharide biosynthesis protein capI - 5.1.3.6 ko:K08679 ko00520,ko01100,map00520,map01100 - R01385 RC00289 ko00000,ko00001,ko01000 - - - Epimerase,GDP_Man_Dehyd WXD2_k127_2369175_2 1347369.CCAD010000083_gene2752 1.64e-40 156.0 COG2050@1|root,COG2050@2|Bacteria,1VNH2@1239|Firmicutes,4I64C@91061|Bacilli,1ZGNM@1386|Bacillus 91061|Bacilli Q Domain of unknown function (DUF4442) - - - - - - - - - - - - 4HBT WXD2_k127_2369175_1 1077972.ARGLB_116_00130 1.255e-40 155.0 COG2606@1|root,COG2606@2|Bacteria,2GKUX@201174|Actinobacteria 201174|Actinobacteria S YbaK prolyl-tRNA synthetase associated region - - - - - - - - - - - - tRNA_edit WXD2_k127_2369175_3 1166948.JPZL01000001_gene3111 8.92e-38 149.0 COG5592@1|root,COG5592@2|Bacteria,1ND3D@1224|Proteobacteria,1SPP8@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Hemerythrin - - - - - - - - - - - - Hemerythrin WXD2_k127_2369175_4 1380370.JIBA01000018_gene463 2.12e-25 113.0 COG2755@1|root,COG2755@2|Bacteria,2IP29@201174|Actinobacteria 201174|Actinobacteria E GDSL-like Lipase/Acylhydrolase family - - - - - - - - - - - - Lipase_GDSL_2 WXD2_k127_2369175_0 1297742.A176_01971 2.511e-210 666.0 COG4650@1|root,COG4650@2|Bacteria,1MX6U@1224|Proteobacteria,42NHB@68525|delta/epsilon subdivisions,2WKUB@28221|Deltaproteobacteria,2YTU9@29|Myxococcales 28221|Deltaproteobacteria K Sigma-54 dependent transcriptional regulator rtcR - - ko:K14414 - - - - ko00000,ko03000 - - - RtcR,Sigma54_activat WXD2_k127_2390570_3 330214.NIDE0518 3.222e-32 134.0 COG2802@1|root,COG2802@2|Bacteria,3J13Q@40117|Nitrospirae 40117|Nitrospirae S ATP-dependent protease La (LON) substrate-binding domain - - - ko:K07157 - - - - ko00000 - - - LON_substr_bdg WXD2_k127_2390570_2 1122917.KB899660_gene1958 2.331e-42 175.0 COG0644@1|root,COG0644@2|Bacteria,1U3SW@1239|Firmicutes,4HSRK@91061|Bacilli,26U60@186822|Paenibacillaceae 91061|Bacilli C FAD binding domain - - - - - - - - - - - - DAO,FAD_binding_3 WXD2_k127_2390570_5 886293.Sinac_7077 7.002e-21 100.0 COG0500@1|root,COG2226@2|Bacteria,2IZZG@203682|Planctomycetes 203682|Planctomycetes Q Methyltransferase domain - - - - - - - - - - - - Methyltransf_25 WXD2_k127_2390570_0 234267.Acid_1914 7.054e-159 511.0 COG0304@1|root,COG0304@2|Bacteria,3Y43C@57723|Acidobacteria 57723|Acidobacteria IQ Beta-ketoacyl synthase, C-terminal domain - - 2.3.1.179 ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119 RC00039,RC02728,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Ketoacyl-synt_C,ketoacyl-synt WXD2_k127_2390570_4 381666.H16_A1278 4.15e-30 134.0 COG0457@1|root,COG2114@1|root,COG3629@1|root,COG3899@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,COG3629@2|Bacteria,COG3899@2|Bacteria,1MUDT@1224|Proteobacteria,2VSSJ@28216|Betaproteobacteria,1K5FA@119060|Burkholderiaceae 28216|Betaproteobacteria T PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - - - - - - - - - - AAA_16,BTAD,Guanylate_cyc,SAM_1,TPR_12,TPR_8,Trans_reg_C WXD2_k127_2390570_1 926566.Terro_3197 1.563e-91 330.0 COG0642@1|root,COG0784@1|root,COG2198@1|root,COG3300@1|root,COG0784@2|Bacteria,COG2198@2|Bacteria,COG2205@2|Bacteria,COG3300@2|Bacteria,3Y3IC@57723|Acidobacteria,2JKGB@204432|Acidobacteriia 204432|Acidobacteriia T Histidine Phosphotransfer domain - - 2.7.13.3 ko:K11527 - - - - ko00000,ko01000,ko01001,ko02022 - - - GAF_2,HATPase_c,HisKA,Hpt,Response_reg WXD2_k127_2390570_6 357808.RoseRS_4060 3.38e-15 90.0 COG4485@1|root,COG4485@2|Bacteria,2G75F@200795|Chloroflexi,3771H@32061|Chloroflexia 32061|Chloroflexia S Bacterial membrane protein YfhO - - - - - - - - - - - - YfhO WXD2_k127_2396829_0 224911.27351002 5.814e-51 193.0 COG0500@1|root,COG0500@2|Bacteria 2|Bacteria Q methyltransferase activity - - - - - - - - - - - - Methyltransf_11,Methyltransf_2,Methyltransf_25 WXD2_k127_2396829_3 1211817.CCAT010000071_gene1307 5.598e-18 92.0 COG0360@1|root,COG0360@2|Bacteria,1VA18@1239|Firmicutes,24QZQ@186801|Clostridia,36JK5@31979|Clostridiaceae 186801|Clostridia J Binds together with S18 to 16S ribosomal RNA rpsF - - ko:K02990 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011,ko03029 - - - Ribosomal_S6 WXD2_k127_2396829_2 1267533.KB906734_gene4260 1.721e-26 112.0 COG0238@1|root,COG0238@2|Bacteria,3Y53K@57723|Acidobacteria,2JN1Z@204432|Acidobacteriia 204432|Acidobacteriia J Ribosomal protein S18 - - - ko:K02963 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S18 WXD2_k127_2396829_1 215803.DB30_7486 2.299e-36 143.0 COG0359@1|root,COG0359@2|Bacteria,1RD0R@1224|Proteobacteria,42SCQ@68525|delta/epsilon subdivisions,2WPZQ@28221|Deltaproteobacteria,2YX0Q@29|Myxococcales 28221|Deltaproteobacteria J binds to the 23S rRNA rplI GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02939 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L9_C,Ribosomal_L9_N WXD2_k127_239768_3 1191523.MROS_0927 7.468e-41 164.0 COG2208@1|root,COG2208@2|Bacteria 2|Bacteria T phosphoserine phosphatase activity - - 3.1.3.3 ko:K07315 - - - - ko00000,ko01000,ko03021 - - - - WXD2_k127_239768_0 1267535.KB906767_gene5241 1.421e-123 425.0 COG3379@1|root,COG3379@2|Bacteria,3Y7EC@57723|Acidobacteria 57723|Acidobacteria S Type I phosphodiesterase / nucleotide pyrophosphatase - - - - - - - - - - - - Phosphodiest WXD2_k127_239768_1 1499967.BAYZ01000028_gene1281 1.677e-112 381.0 COG0747@1|root,COG0747@2|Bacteria,2NR54@2323|unclassified Bacteria 2|Bacteria E Bacterial extracellular solute-binding proteins, family 5 Middle appA - - ko:K02035 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - SBP_bac_5 WXD2_k127_239768_4 465817.ETA_33800 1.147e-25 122.0 COG1285@1|root,COG1285@2|Bacteria,1MURJ@1224|Proteobacteria,1RQUD@1236|Gammaproteobacteria,3X800@551|Erwinia 1236|Gammaproteobacteria S MgtC family mgtC GO:0008150,GO:0009405,GO:0044419,GO:0051704 - ko:K07507 - - - - ko00000,ko02000 9.B.20 - - MgtC WXD2_k127_239768_2 1242864.D187_004919 1.278e-58 205.0 COG0174@1|root,COG0174@2|Bacteria,1NZU7@1224|Proteobacteria 1224|Proteobacteria E glutamine synthetase glnII - 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 - R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 - - - Gln-synt_C,Gln-synt_N WXD2_k127_2400904_0 378806.STAUR_4594 7.366e-57 205.0 COG1595@1|root,COG1595@2|Bacteria,1PEJM@1224|Proteobacteria,4380A@68525|delta/epsilon subdivisions,2X3AB@28221|Deltaproteobacteria,2YV3Y@29|Myxococcales 28221|Deltaproteobacteria K Belongs to the sigma-70 factor family. ECF subfamily rpoE - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 WXD2_k127_2400904_3 290398.Csal_0951 0.0008502 50.0 COG0484@1|root,COG0484@2|Bacteria,1NKPH@1224|Proteobacteria,1SHSE@1236|Gammaproteobacteria 1236|Gammaproteobacteria O DnaJ molecular chaperone homology domain - - - - - - - - - - - - DnaJ,TerB WXD2_k127_2400904_1 1173021.ALWA01000019_gene306 1.267e-26 115.0 COG4293@1|root,COG4293@2|Bacteria,1G555@1117|Cyanobacteria 1117|Cyanobacteria S COGs COG4293 conserved - - - - - - - - - - - - DUF1802 WXD2_k127_2400904_2 545276.KB898725_gene651 2.917e-18 87.0 COG0720@1|root,COG0720@2|Bacteria,1PNDM@1224|Proteobacteria,1S7ZW@1236|Gammaproteobacteria,1WZ30@135613|Chromatiales 135613|Chromatiales H 6-pyruvoyl tetrahydropterin synthase - - 4.1.2.50,4.2.3.12 ko:K01737 ko00790,ko01100,map00790,map01100 M00842,M00843 R04286,R09959 RC01117,RC02846,RC02847 ko00000,ko00001,ko00002,ko01000,ko03016 - - - PTPS WXD2_k127_2401788_5 290397.Adeh_0810 4.212e-64 224.0 COG0247@1|root,COG0277@1|root,COG0247@2|Bacteria,COG0277@2|Bacteria,1MU6Y@1224|Proteobacteria,42M5I@68525|delta/epsilon subdivisions,2WK8Y@28221|Deltaproteobacteria,2YUG8@29|Myxococcales 28221|Deltaproteobacteria C 4Fe-4S dicluster domain - - - - - - - - - - - - CCG,FAD-oxidase_C,FAD_binding_4,Fer4_8 WXD2_k127_2401788_7 861299.J421_0340 4.949e-11 73.0 COG3595@1|root,COG3595@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - DUF4097,PA14 WXD2_k127_2401788_2 1192034.CAP_2968 2.124e-89 302.0 COG4914@1|root,COG4914@2|Bacteria,1QX3W@1224|Proteobacteria,42ZWQ@68525|delta/epsilon subdivisions,2WVG3@28221|Deltaproteobacteria,2Z3HN@29|Myxococcales 28221|Deltaproteobacteria S Nucleotidyl transferase of unknown function (DUF2204) - - - - - - - - - - - - DUF2204 WXD2_k127_2401788_1 1173027.Mic7113_2540 5.28e-99 334.0 COG2129@1|root,COG2129@2|Bacteria 2|Bacteria L metallophosphoesterase - - - ko:K07096 - - - - ko00000 - - - Metallophos,Metallophos_2 WXD2_k127_2401788_0 1395571.TMS3_0107090 6.082e-123 407.0 COG1262@1|root,COG1262@2|Bacteria,1MUNC@1224|Proteobacteria,1RQI4@1236|Gammaproteobacteria 1236|Gammaproteobacteria Q methyltransferase sumf2 - - - - - - - - - - - DinB_2,FGE-sulfatase,Methyltransf_11,Methyltransf_12,Methyltransf_23,Methyltransf_25,Methyltransf_31 WXD2_k127_2401788_4 215803.DB30_2740 1.511e-69 241.0 COG0605@1|root,COG0605@2|Bacteria,1R4Z3@1224|Proteobacteria,42QV7@68525|delta/epsilon subdivisions,2WMPC@28221|Deltaproteobacteria,2YVDJ@29|Myxococcales 28221|Deltaproteobacteria C Iron/manganese superoxide dismutases, C-terminal domain sodA - 1.15.1.1 ko:K04564 ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016 - - - ko00000,ko00001,ko01000 - - - Sod_Fe_C,Sod_Fe_N WXD2_k127_2401788_3 309807.SRU_1197 2.129e-79 277.0 COG1131@1|root,COG1131@2|Bacteria,4NFNM@976|Bacteroidetes 976|Bacteroidetes V ABC transporter yxlF_1 - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran WXD2_k127_2401788_6 309807.SRU_1196 2.036e-20 106.0 COG1277@1|root,COG1277@2|Bacteria 2|Bacteria - - - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_2,ABC2_membrane_4 WXD2_k127_2412007_5 644282.Deba_1410 1.106e-14 76.0 COG2159@1|root,COG2159@2|Bacteria,1RDRH@1224|Proteobacteria,42S7M@68525|delta/epsilon subdivisions,2WNWY@28221|Deltaproteobacteria 28221|Deltaproteobacteria S PFAM Amidohydrolase 2 - - - ko:K07045 - - - - ko00000 - - - Amidohydro_2 WXD2_k127_2412007_2 644282.Deba_1410 2.058e-65 229.0 COG2159@1|root,COG2159@2|Bacteria,1RDRH@1224|Proteobacteria,42S7M@68525|delta/epsilon subdivisions,2WNWY@28221|Deltaproteobacteria 28221|Deltaproteobacteria S PFAM Amidohydrolase 2 - - - ko:K07045 - - - - ko00000 - - - Amidohydro_2 WXD2_k127_2412007_4 335543.Sfum_2210 3.996e-22 103.0 COG1032@1|root,COG1032@2|Bacteria,1PDZR@1224|Proteobacteria,42M73@68525|delta/epsilon subdivisions,2WK6Y@28221|Deltaproteobacteria 28221|Deltaproteobacteria C Radical SAM - - - - - - - - - - - - B12-binding,Radical_SAM WXD2_k127_2412007_6 670292.JH26_17435 1.195e-08 59.0 COG3952@1|root,COG3952@2|Bacteria,1MZ60@1224|Proteobacteria,2UCCY@28211|Alphaproteobacteria,1JUVB@119045|Methylobacteriaceae 28211|Alphaproteobacteria S PFAM lipid A biosynthesis domain protein - - - - - - - - - - - - LAB_N WXD2_k127_2412007_1 1121441.AUCX01000034_gene1581 7.571e-70 245.0 COG0463@1|root,COG0463@2|Bacteria,1MW2G@1224|Proteobacteria,43BKJ@68525|delta/epsilon subdivisions,2WIZJ@28221|Deltaproteobacteria,2M9AT@213115|Desulfovibrionales 28221|Deltaproteobacteria M PFAM Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 WXD2_k127_2412007_3 562970.Btus_0052 3.266e-64 228.0 COG0084@1|root,COG0084@2|Bacteria,1TNY1@1239|Firmicutes,4HA74@91061|Bacilli,27859@186823|Alicyclobacillaceae 91061|Bacilli L TatD related DNase tatD GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 - ko:K03424 - - - - ko00000,ko01000 - - - TatD_DNase WXD2_k127_2412007_0 240015.ACP_0266 4.558e-79 277.0 COG0624@1|root,COG0624@2|Bacteria,3Y2K0@57723|Acidobacteria,2JIEY@204432|Acidobacteriia 204432|Acidobacteriia E PFAM peptidase - - 3.5.1.16 ko:K01438 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028,M00845 R00669,R09107 RC00064,RC00300 ko00000,ko00001,ko00002,ko01000 - - - M20_dimer,Peptidase_M20 WXD2_k127_2412007_7 1192034.CAP_8241 3.08e-06 59.0 COG2304@1|root,COG2304@2|Bacteria,1MUTS@1224|Proteobacteria,42R8X@68525|delta/epsilon subdivisions,2WN6U@28221|Deltaproteobacteria,2YWMS@29|Myxococcales 28221|Deltaproteobacteria S protein containing a von Willebrand factor type A (vWA) domain - - - ko:K07114 - - - - ko00000,ko02000 1.A.13.2.2,1.A.13.2.3 - - VWA WXD2_k127_2426721_1 696281.Desru_2004 2.019e-74 261.0 COG1866@1|root,COG1866@2|Bacteria,1TPQV@1239|Firmicutes,248JE@186801|Clostridia,26321@186807|Peptococcaceae 186801|Clostridia F Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA pckA - 4.1.1.49 ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 M00003,M00170 R00341 RC00002,RC02741 ko00000,ko00001,ko00002,ko01000 - - - PEPCK_ATP WXD2_k127_2426721_0 1198114.AciX9_1751 2.005e-120 417.0 COG0795@1|root,COG0795@2|Bacteria,3Y2F9@57723|Acidobacteria,2JI5V@204432|Acidobacteriia 204432|Acidobacteriia S Permease, YjgP YjgQ - - - - - - - - - - - - YjgP_YjgQ WXD2_k127_2435906_0 204669.Acid345_2940 6.921e-180 577.0 COG2234@1|root,COG2234@2|Bacteria,3Y3SC@57723|Acidobacteria,2JIVJ@204432|Acidobacteriia 204432|Acidobacteriia S PFAM peptidase M28 - - - - - - - - - - - - Peptidase_M28 WXD2_k127_2435906_2 398767.Glov_2209 3.136e-51 193.0 COG1216@1|root,COG1216@2|Bacteria,1QVEM@1224|Proteobacteria,42TG8@68525|delta/epsilon subdivisions,2WQC2@28221|Deltaproteobacteria 28221|Deltaproteobacteria S PFAM Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 WXD2_k127_2435906_3 696281.Desru_1735 2.751e-36 152.0 COG0304@1|root,COG0304@2|Bacteria,1TPA7@1239|Firmicutes,247VF@186801|Clostridia,2602N@186807|Peptococcaceae 186801|Clostridia I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP fabF - 2.3.1.179 ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119 RC00039,RC02728,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Ketoacyl-synt_C,ketoacyl-synt WXD2_k127_2435906_1 634956.Geoth_3619 2.098e-67 242.0 COG0304@1|root,COG0304@2|Bacteria,1TPA7@1239|Firmicutes,4H9SD@91061|Bacilli,1WE7S@129337|Geobacillus 91061|Bacilli I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP - - 2.3.1.179 ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119 RC00039,RC02728,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Ketoacyl-synt_C,ketoacyl-synt WXD2_k127_2446549_1 1121013.P873_12785 5.397e-163 516.0 COG1132@1|root,COG1132@2|Bacteria,1MXC2@1224|Proteobacteria,1SZTS@1236|Gammaproteobacteria,1X4EA@135614|Xanthomonadales 135614|Xanthomonadales V abc transporter atp-binding protein - - - ko:K06147 - - - - ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 - - ABC_membrane,ABC_tran WXD2_k127_2446549_4 716544.wcw_0715 3.577e-19 91.0 COG0724@1|root,COG0724@2|Bacteria,2JGG9@204428|Chlamydiae 204428|Chlamydiae S RNA recognition motif rbp - - - - - - - - - - - RRM_1 WXD2_k127_2446549_2 1254432.SCE1572_15915 1.014e-77 265.0 COG1335@1|root,COG1335@2|Bacteria,1MZP9@1224|Proteobacteria,42SNF@68525|delta/epsilon subdivisions,2X6IF@28221|Deltaproteobacteria,2Z22A@29|Myxococcales 28221|Deltaproteobacteria Q Isochorismatase family - - - - - - - - - - - - Isochorismatase WXD2_k127_2446549_0 498848.TaqDRAFT_4327 5.921e-193 612.0 COG0702@1|root,COG0702@2|Bacteria,1WJH3@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus GM Protein of unknown function (DUF2867) - - - - - - - - - - - - DUF2867,NAD_binding_10,NmrA WXD2_k127_2446549_3 670292.JH26_11475 8.905e-50 184.0 COG2335@1|root,COG2335@2|Bacteria,1RD06@1224|Proteobacteria,2U7H5@28211|Alphaproteobacteria,1JTC0@119045|Methylobacteriaceae 28211|Alphaproteobacteria M Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - - - - - - - - - - Fasciclin WXD2_k127_2460754_9 1322246.BN4_11698 1.48e-19 91.0 COG1837@1|root,COG1837@2|Bacteria,1N7IX@1224|Proteobacteria,42TXI@68525|delta/epsilon subdivisions,2WQBS@28221|Deltaproteobacteria,2MCGN@213115|Desulfovibrionales 28221|Deltaproteobacteria S Belongs to the UPF0109 family - - - ko:K06960 - - - - ko00000 - - - KH_4 WXD2_k127_2460754_10 944479.JQLX01000015_gene135 4.561e-18 87.0 COG0228@1|root,COG0228@2|Bacteria,1MZCT@1224|Proteobacteria,42V30@68525|delta/epsilon subdivisions,2WRH7@28221|Deltaproteobacteria,2M7EP@213113|Desulfurellales 28221|Deltaproteobacteria J Ribosomal protein S16 rpsP GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02959 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011,ko03029 - - - Ribosomal_S16 WXD2_k127_2460754_2 2325.TKV_c13780 4.385e-149 484.0 COG0541@1|root,COG0541@2|Bacteria,1TP06@1239|Firmicutes,248EU@186801|Clostridia,42FGH@68295|Thermoanaerobacterales 186801|Clostridia U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY ffh - 3.6.5.4 ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko01000,ko02044 3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9 - - SRP54,SRP54_N,SRP_SPB WXD2_k127_2460754_5 1340493.JNIF01000003_gene2831 3.683e-72 258.0 COG0415@1|root,COG0415@2|Bacteria,3Y31R@57723|Acidobacteria 57723|Acidobacteria L PFAM DNA photolyase, FAD-binding - - 4.1.99.3 ko:K01669 - - - - ko00000,ko01000,ko03400 - - - DNA_photolyase,FAD_binding_7 WXD2_k127_2460754_8 1118153.MOY_13740 5.663e-28 130.0 COG0840@1|root,COG0840@2|Bacteria,1RKC0@1224|Proteobacteria,1SD9F@1236|Gammaproteobacteria 1236|Gammaproteobacteria NT photoactive yellow protein - - - - - - - - - - - - PAS WXD2_k127_2460754_3 111780.Sta7437_1635 8.712e-105 348.0 COG0491@1|root,COG1141@1|root,COG0491@2|Bacteria,COG1141@2|Bacteria,1G3D1@1117|Cyanobacteria,3VIAS@52604|Pleurocapsales 1117|Cyanobacteria C 4Fe-4S single cluster domain of Ferredoxin I - - - - - - - - - - - - Fer4_13 WXD2_k127_2460754_4 1173027.Mic7113_2544 9.038e-85 293.0 COG1295@1|root,COG1295@2|Bacteria,1G1HS@1117|Cyanobacteria,1H9BW@1150|Oscillatoriales 1117|Cyanobacteria S PFAM Ribonuclease BN-like family - - - ko:K07058 - - - - ko00000 - - - Virul_fac_BrkB WXD2_k127_2460754_7 1161401.ASJA01000015_gene966 3.189e-34 139.0 COG0398@1|root,COG0398@2|Bacteria,1MVF3@1224|Proteobacteria,2UEXB@28211|Alphaproteobacteria 28211|Alphaproteobacteria S SNARE associated Golgi protein - - - - - - - - - - - - SNARE_assoc WXD2_k127_2460754_0 204669.Acid345_2810 2.101e-310 977.0 COG0166@1|root,COG0176@1|root,COG0166@2|Bacteria,COG0176@2|Bacteria,3Y5VJ@57723|Acidobacteria,2JKZ5@204432|Acidobacteriia 204432|Acidobacteriia G Phosphoglucose isomerase - - 2.2.1.2,5.3.1.9 ko:K01810,ko:K13810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00004,M00007,M00114 R01827,R02739,R02740,R03321 RC00376,RC00439,RC00563,RC00604 ko00000,ko00001,ko00002,ko01000,ko04147 - - - PGI WXD2_k127_2460754_1 204669.Acid345_2811 3.563e-182 581.0 COG0362@1|root,COG0362@2|Bacteria,3Y990@57723|Acidobacteria,2JP1Q@204432|Acidobacteriia 204432|Acidobacteriia G 6-phosphogluconate dehydrogenase, C-terminal domain - - 1.1.1.343,1.1.1.44 ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 M00004,M00006 R01528,R10221 RC00001,RC00539 ko00000,ko00001,ko00002,ko01000 - - - 6PGD,NAD_binding_2 WXD2_k127_2460754_6 1123368.AUIS01000044_gene15 2.738e-57 205.0 COG1502@1|root,COG1502@2|Bacteria,1MWUW@1224|Proteobacteria,1RPQG@1236|Gammaproteobacteria,2ND0X@225057|Acidithiobacillales 225057|Acidithiobacillales I Phospholipase D Transphosphatidylase - - - ko:K06131 ko00564,ko01100,map00564,map01100 - R07390 RC00017 ko00000,ko00001,ko01000 - - - PLDc_2 WXD2_k127_2468488_5 1232436.CAPF01000027_gene896 0.0004032 51.0 COG3944@1|root,COG3944@2|Bacteria,2HUUB@201174|Actinobacteria,4CVNP@84998|Coriobacteriia 84998|Coriobacteriia M Chain length determinant protein - - - - - - - - - - - - GNVR,Wzz WXD2_k127_2468488_2 948106.AWZT01000006_gene3168 1.821e-66 245.0 COG0223@1|root,COG0223@2|Bacteria,1NN5V@1224|Proteobacteria,2VWHM@28216|Betaproteobacteria,1K8SD@119060|Burkholderiaceae 28216|Betaproteobacteria J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus - - - - - - - - - - - - - WXD2_k127_2468488_3 379066.GAU_3882 1.092e-46 176.0 COG0720@1|root,COG0720@2|Bacteria,1ZTW0@142182|Gemmatimonadetes 142182|Gemmatimonadetes H 6-pyruvoyl tetrahydropterin synthase - - 4.1.2.50,4.2.3.12 ko:K01737 ko00790,ko01100,map00790,map01100 M00842,M00843 R04286,R09959 RC01117,RC02846,RC02847 ko00000,ko00001,ko00002,ko01000,ko03016 - - - PTPS WXD2_k127_2468488_4 1172188.KB911826_gene250 1.002e-19 94.0 2DPPE@1|root,332VJ@2|Bacteria,2IN30@201174|Actinobacteria,4FGZI@85021|Intrasporangiaceae 201174|Actinobacteria S Putative Actinobacterial Holin-X, holin superfamily III - - - - - - - - - - - - Phage_holin_3_6 WXD2_k127_2468488_1 1341151.ASZU01000004_gene15 2.006e-71 256.0 COG0758@1|root,COG0758@2|Bacteria,1TPP7@1239|Firmicutes,4HGWM@91061|Bacilli,27B6J@186824|Thermoactinomycetaceae 91061|Bacilli LU DNA recombination-mediator protein A dprA GO:0007154,GO:0008150,GO:0009292,GO:0009294,GO:0009605,GO:0009987,GO:0009991,GO:0030420,GO:0031668,GO:0044764,GO:0050896,GO:0051704,GO:0051716,GO:0071496 - ko:K04096 - - - - ko00000 - - - DNA_processg_A WXD2_k127_2468488_6 696747.NIES39_O05370 0.0005702 51.0 COG0265@1|root,COG0457@1|root,COG0265@2|Bacteria,COG0457@2|Bacteria,1G36K@1117|Cyanobacteria,1H9PH@1150|Oscillatoriales 1117|Cyanobacteria O TPR repeat - - - - - - - - - - - - Methyltransf_11,TPR_1,TPR_11,TPR_2,TPR_4,TPR_8,Trypsin_2 WXD2_k127_2468488_0 1047013.AQSP01000115_gene336 1.86e-100 361.0 COG0823@1|root,COG4775@1|root,COG0823@2|Bacteria,COG4775@2|Bacteria,2NNRF@2323|unclassified Bacteria 2|Bacteria MU WD40-like Beta Propeller Repeat - - - ko:K03641,ko:K07277 - - - - ko00000,ko02000,ko03029 1.B.33,2.C.1.2 - - BSP,Bac_surface_Ag,PD40,Peptidase_MA_2,TolB_N WXD2_k127_2503764_2 483219.LILAB_06410 2.934e-21 98.0 COG1544@1|root,COG1544@2|Bacteria,1PVQA@1224|Proteobacteria,435K4@68525|delta/epsilon subdivisions,2X9AW@28221|Deltaproteobacteria,2Z114@29|Myxococcales 28221|Deltaproteobacteria J Sigma 54 modulation protein / S30EA ribosomal protein - - - - - - - - - - - - Ribosomal_S30AE WXD2_k127_2503764_1 323848.Nmul_A1168 4.954e-47 177.0 COG1499@1|root,COG1499@2|Bacteria,1RD49@1224|Proteobacteria,2VRQB@28216|Betaproteobacteria,37347@32003|Nitrosomonadales 28216|Betaproteobacteria J ribosomal large subunit export from nucleus - - - - - - - - - - - - - WXD2_k127_2503764_0 1304883.KI912532_gene1389 2.343e-72 247.0 COG0448@1|root,COG0448@2|Bacteria,1MVTC@1224|Proteobacteria,2VIP2@28216|Betaproteobacteria,2KUTG@206389|Rhodocyclales 206389|Rhodocyclales F Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc glgC - 2.7.7.27 ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 M00565 R00948 RC00002 ko00000,ko00001,ko00002,ko01000 - - - NTP_transferase WXD2_k127_2505850_0 1382359.JIAL01000001_gene1070 3.713e-240 751.0 COG4799@1|root,COG4799@2|Bacteria,3Y3SM@57723|Acidobacteria,2JIBH@204432|Acidobacteriia 204432|Acidobacteriia I Carboxyl transferase domain - - 2.1.3.15,6.4.1.3 ko:K01966 ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200 M00373,M00741 R01859 RC00097,RC00609 ko00000,ko00001,ko00002,ko01000 - - - Carboxyl_trans WXD2_k127_2539070_0 1121438.JNJA01000002_gene3482 5.739e-59 214.0 COG1219@1|root,COG1219@2|Bacteria,1NS53@1224|Proteobacteria,42YDC@68525|delta/epsilon subdivisions,2WU6T@28221|Deltaproteobacteria,2MAA0@213115|Desulfovibrionales 28221|Deltaproteobacteria O AAA domain (Cdc48 subfamily) - - - ko:K03544 ko04112,map04112 - - - ko00000,ko00001,ko03110 - - - AAA_2 WXD2_k127_2539070_1 247490.KSU1_C0532 3.876e-23 104.0 COG0745@1|root,COG0745@2|Bacteria 247490.KSU1_C0532|- T phosphorelay signal transduction system - - - - - - - - - - - - - WXD2_k127_2539070_2 243160.BMA0062 5.235e-05 51.0 COG5652@1|root,COG5652@2|Bacteria,1PJUW@1224|Proteobacteria,2VHEZ@28216|Betaproteobacteria,1K488@119060|Burkholderiaceae 28216|Betaproteobacteria S PFAM VanZ family protein - - - - - - - - - - - - VanZ WXD2_k127_2546367_3 404589.Anae109_4415 7.873e-105 348.0 COG0559@1|root,COG0559@2|Bacteria,1MU25@1224|Proteobacteria,42NUE@68525|delta/epsilon subdivisions,2WMSB@28221|Deltaproteobacteria,2Z33U@29|Myxococcales 28221|Deltaproteobacteria P Belongs to the binding-protein-dependent transport system permease family - - - ko:K01997 ko02010,ko02024,map02010,map02024 M00237 - - ko00000,ko00001,ko00002,ko02000 3.A.1.4 - - BPD_transp_2 WXD2_k127_2546367_4 1379698.RBG1_1C00001G1349 2.416e-95 325.0 COG4177@1|root,COG4177@2|Bacteria,2NPMP@2323|unclassified Bacteria 2|Bacteria U Branched-chain amino acid transport system / permease component - - - ko:K01995,ko:K01998 ko02010,ko02024,map02010,map02024 M00237 - - ko00000,ko00001,ko00002,ko02000 3.A.1.4 - - BPD_transp_2 WXD2_k127_2546367_5 1392502.JNIO01000002_gene476 3.864e-88 308.0 COG0411@1|root,COG0411@2|Bacteria,1TR0P@1239|Firmicutes,4H1WJ@909932|Negativicutes 909932|Negativicutes E ABC transporter livG - - ko:K01995 ko02010,ko02024,map02010,map02024 M00237 - - ko00000,ko00001,ko00002,ko02000 3.A.1.4 - - ABC_tran,BCA_ABC_TP_C WXD2_k127_2546367_6 1094508.Tsac_2227 5.698e-79 282.0 COG0410@1|root,COG0410@2|Bacteria,1TPW4@1239|Firmicutes,247PN@186801|Clostridia,42EMQ@68295|Thermoanaerobacterales 186801|Clostridia E ABC transporter related livF - - ko:K01996 ko02010,ko02024,map02010,map02024 M00237 - - ko00000,ko00001,ko00002,ko02000 3.A.1.4 - - ABC_tran WXD2_k127_2546367_8 861299.J421_0340 8.201e-14 81.0 COG3595@1|root,COG3595@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - DUF4097,PA14 WXD2_k127_2546367_2 861299.J421_4351 2.307e-105 369.0 COG0833@1|root,COG0833@2|Bacteria 2|Bacteria E amino acid - - - ko:K03294,ko:K20265 ko02024,map02024 - - - ko00000,ko00001,ko02000 2.A.3.2,2.A.3.7.1,2.A.3.7.3 - - AA_permease_2 WXD2_k127_2546367_1 234267.Acid_2549 8.366e-120 397.0 COG4638@1|root,COG4638@2|Bacteria,3Y547@57723|Acidobacteria 57723|Acidobacteria P Ring hydroxylating alpha subunit (catalytic domain) - - 1.14.15.7 ko:K00479,ko:K00499 ko00260,map00260 - R07409 RC00087 ko00000,ko00001,ko01000 - - - Rieske,Ring_hydroxyl_A WXD2_k127_2546367_7 1380391.JIAS01000003_gene1835 8.537e-67 239.0 COG2818@1|root,COG2818@2|Bacteria,1R9X5@1224|Proteobacteria,2TUP5@28211|Alphaproteobacteria,2JQMB@204441|Rhodospirillales 204441|Rhodospirillales L COG2818 3-methyladenine DNA glycosylase - - 3.2.2.20 ko:K01246 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Adenine_glyco WXD2_k127_2546367_0 635013.TherJR_0997 3.038e-144 487.0 COG0395@1|root,COG5001@1|root,COG5002@1|root,COG0395@2|Bacteria,COG5001@2|Bacteria,COG5002@2|Bacteria,1TP8V@1239|Firmicutes,247PX@186801|Clostridia,26021@186807|Peptococcaceae 186801|Clostridia T Diguanylate cyclase - - - - - - - - - - - - EAL,GGDEF,PAS,PAS_8,PAS_9 WXD2_k127_2549124_3 1230457.C476_15925 1.055e-12 69.0 COG0425@1|root,arCOG02062@2157|Archaea,2XYN1@28890|Euryarchaeota,23WSE@183963|Halobacteria 183963|Halobacteria O redox protein, regulator of disulfide bond formation - - - - - - - - - - - - TusA WXD2_k127_2549124_0 1408473.JHXO01000006_gene1121 6.154e-109 369.0 COG2067@1|root,COG2067@2|Bacteria 2|Bacteria I long-chain fatty acid transporting porin activity - - - ko:K06076 - - - - ko00000,ko02000 1.B.9 - - Toluene_X WXD2_k127_2549124_4 1167006.UWK_01979 0.0007404 53.0 2DYVX@1|root,34BD3@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_2549124_2 861299.J421_1183 5.824e-69 248.0 COG0429@1|root,COG0429@2|Bacteria,1ZSTN@142182|Gemmatimonadetes 142182|Gemmatimonadetes S alpha/beta hydrolase fold - - - ko:K07019 - - - - ko00000 - - - Abhydrolase_1 WXD2_k127_2549124_1 204669.Acid345_2433 1.925e-88 316.0 COG4206@1|root,COG4206@2|Bacteria,3Y3IJ@57723|Acidobacteria,2JHQY@204432|Acidobacteriia 204432|Acidobacteriia H TonB dependent receptor - - - - - - - - - - - - CarboxypepD_reg,Plug,TonB_dep_Rec WXD2_k127_255608_2 1184267.A11Q_2564 1.097e-25 109.0 COG2259@1|root,COG2259@2|Bacteria,1NCQT@1224|Proteobacteria,42WUM@68525|delta/epsilon subdivisions,2MTDS@213481|Bdellovibrionales,2WT9R@28221|Deltaproteobacteria 213481|Bdellovibrionales S DoxX - - - ko:K15977 - - - - ko00000 - - - DoxX WXD2_k127_255608_1 1278073.MYSTI_05248 7.183e-48 186.0 COG3746@1|root,COG3746@2|Bacteria,1PBWD@1224|Proteobacteria,433TT@68525|delta/epsilon subdivisions,2X3F8@28221|Deltaproteobacteria,2YVU2@29|Myxococcales 28221|Deltaproteobacteria P phosphate-selective porin O and P - - - - - - - - - - - - - WXD2_k127_255608_5 682795.AciX8_1679 2.483e-10 68.0 COG2062@1|root,COG2062@2|Bacteria,3Y4I9@57723|Acidobacteria,2JJAB@204432|Acidobacteriia 204432|Acidobacteriia T Phosphoglycerate mutase family - - - ko:K08296 - - - - ko00000,ko01000 - - - His_Phos_1 WXD2_k127_255608_0 485913.Krac_11844 6.795e-119 402.0 COG0477@1|root,COG0477@2|Bacteria,2G5J9@200795|Chloroflexi 200795|Chloroflexi P TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - - - - - - - - - - MFS_1 WXD2_k127_255608_3 1242864.D187_004407 6.281e-22 102.0 COG0226@1|root,COG0226@2|Bacteria,1MVXP@1224|Proteobacteria,42P0G@68525|delta/epsilon subdivisions,2WK7Y@28221|Deltaproteobacteria 28221|Deltaproteobacteria P TIGRFAM phosphate binding protein - - - ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - PBP_like_2 WXD2_k127_255608_4 290397.Adeh_4006 3.302e-21 93.0 COG0226@1|root,COG0226@2|Bacteria,1MVXP@1224|Proteobacteria,42P0G@68525|delta/epsilon subdivisions,2WK7Y@28221|Deltaproteobacteria,2YVQ5@29|Myxococcales 28221|Deltaproteobacteria P PBP superfamily domain pstS - - ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - PBP_like_2 WXD2_k127_2561714_2 1123401.JHYQ01000021_gene1059 1.773e-66 251.0 COG1520@1|root,COG1520@2|Bacteria,1R4I1@1224|Proteobacteria,1SJ0B@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - - - - - - - - - - - WXD2_k127_2561714_0 118163.Ple7327_1968 1.335e-74 274.0 COG2931@1|root,COG2931@2|Bacteria,1GHAU@1117|Cyanobacteria,3VMMX@52604|Pleurocapsales 1117|Cyanobacteria Q TIGRFAM parallel beta-helix repeat (two copies) - - - - - - - - - - - - Beta_helix WXD2_k127_2561714_5 981369.JQMJ01000004_gene394 5.051e-31 141.0 COG5297@1|root,COG5297@2|Bacteria,2GK92@201174|Actinobacteria,2NHEI@228398|Streptacidiphilus 201174|Actinobacteria G Glycosyl hydrolases family 6 guxA1 - 3.2.1.91 ko:K19668 ko00500,ko01100,ko02020,map00500,map01100,map02020 - R02886,R11308 RC00799 ko00000,ko00001,ko01000 - GH6 - CBM_2,CBM_3,Glyco_hydro_6,fn3 WXD2_k127_2561714_4 1194972.MVAC_05152 9.449e-46 182.0 COG0438@1|root,COG0438@2|Bacteria,2GN28@201174|Actinobacteria,237SZ@1762|Mycobacteriaceae 201174|Actinobacteria M PFAM Glycosyl transferase, group 1 - - - - - - - - - - - - Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1 WXD2_k127_2561714_3 1267535.KB906767_gene2401 1.338e-55 204.0 COG2148@1|root,COG2148@2|Bacteria,3Y3GZ@57723|Acidobacteria,2JIAU@204432|Acidobacteriia 204432|Acidobacteriia M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase - - - - - - - - - - - - Bac_transf,CoA_binding_3 WXD2_k127_2561714_1 378806.STAUR_0614 1.561e-72 274.0 COG0438@1|root,COG0438@2|Bacteria,1MVKK@1224|Proteobacteria,42M7Q@68525|delta/epsilon subdivisions,2WJ9Z@28221|Deltaproteobacteria 28221|Deltaproteobacteria M PFAM Glycosyl transferase, group 1 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 WXD2_k127_2585602_7 1227739.Hsw_2638 9.206e-94 322.0 COG5000@1|root,COG5000@2|Bacteria,4NFQN@976|Bacteroidetes,47KW9@768503|Cytophagia 976|Bacteroidetes T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - - - - - - - - - - HATPase_c,PAS,PAS_8 WXD2_k127_2585602_3 1166018.FAES_3422 3.405e-152 494.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,47JF9@768503|Cytophagia 976|Bacteroidetes T two component, sigma54 specific, transcriptional regulator, Fis family - - - ko:K02481 - - - - ko00000,ko02022 - - - HTH_8,Response_reg,Sigma54_activat WXD2_k127_2585602_9 1198452.Jab_1c20610 1.304e-65 246.0 COG0577@1|root,COG0577@2|Bacteria 2|Bacteria V efflux transmembrane transporter activity - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD WXD2_k127_2585602_8 509635.N824_28840 2.204e-92 319.0 COG0577@1|root,COG0577@2|Bacteria,4NI8K@976|Bacteroidetes,1IPHF@117747|Sphingobacteriia 976|Bacteroidetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD WXD2_k127_2585602_6 1408813.AYMG01000008_gene3924 5.146e-97 321.0 COG1136@1|root,COG1136@2|Bacteria,4NFDW@976|Bacteroidetes,1IPY1@117747|Sphingobacteriia 976|Bacteroidetes V COG1136 ABC-type antimicrobial peptide transport system ATPase component ytrE_3 - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran WXD2_k127_2585602_11 1121015.N789_12925 1.109e-44 183.0 COG1566@1|root,COG1566@2|Bacteria 2|Bacteria V PFAM secretion protein HlyD family protein - - - ko:K03543,ko:K16922 - M00701 - - ko00000,ko00002,ko01002,ko02000 8.A.1.1 - - Biotin_lipoyl_2,GbpC,Gram_pos_anchor,HlyD_3,YSIRK_signal WXD2_k127_2585602_5 1242864.D187_002653 1.088e-100 336.0 COG4977@1|root,COG4977@2|Bacteria,1MUDK@1224|Proteobacteria 1224|Proteobacteria K Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain darR - - - - - - - - - - - DJ-1_PfpI,HTH_18 WXD2_k127_2585602_10 1242864.D187_002652 5.306e-48 184.0 COG1335@1|root,COG1335@2|Bacteria,1RDHA@1224|Proteobacteria,42S3C@68525|delta/epsilon subdivisions,2WNV0@28221|Deltaproteobacteria 28221|Deltaproteobacteria Q PFAM isochorismatase hydrolase yddQ - - - - - - - - - - - Isochorismatase WXD2_k127_2585602_2 575540.Isop_3575 2.753e-189 603.0 COG0531@1|root,COG0531@2|Bacteria,2IXT5@203682|Planctomycetes 203682|Planctomycetes E PFAM Amino acid permease - - - ko:K03294 - - - - ko00000 2.A.3.2 - - AA_permease_2 WXD2_k127_2585602_0 861299.J421_3037 1.819e-229 720.0 COG1012@1|root,COG1012@2|Bacteria,1ZUF7@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Aldehyde dehydrogenase family - - 1.2.1.18,1.2.1.27 ko:K00140 ko00280,ko00410,ko00562,ko00640,ko01100,ko01200,map00280,map00410,map00562,map00640,map01100,map01200 M00013 R00705,R00706,R00922,R00935 RC00004,RC02723,RC02817 ko00000,ko00001,ko00002,ko01000 - - - Aldedh WXD2_k127_2585602_4 765910.MARPU_00500 1.412e-150 489.0 COG0334@1|root,COG0334@2|Bacteria,1MUMF@1224|Proteobacteria,1RPUZ@1236|Gammaproteobacteria,1WXUS@135613|Chromatiales 135613|Chromatiales E Belongs to the Glu Leu Phe Val dehydrogenases family - - 1.4.1.3 ko:K00261 ko00220,ko00250,ko00471,ko00910,ko01100,ko01200,ko04217,ko04964,map00220,map00250,map00471,map00910,map01100,map01200,map04217,map04964 M00740 R00243,R00248 RC00006,RC02799 ko00000,ko00001,ko00002,ko01000,ko04147 - - - ELFV_dehydrog,ELFV_dehydrog_N WXD2_k127_2585602_1 266117.Rxyl_0222 2.764e-192 613.0 COG1953@1|root,COG1953@2|Bacteria,2GJXN@201174|Actinobacteria 201174|Actinobacteria FH permease for cytosine purines, uracil, thiamine, allantoin - - - ko:K03457 - - - - ko00000 2.A.39 - - Transp_cyt_pur WXD2_k127_2585602_12 710687.KI912270_gene2635 3.382e-44 178.0 COG3209@1|root,COG4254@1|root,COG5184@1|root,COG3209@2|Bacteria,COG4254@2|Bacteria,COG5184@2|Bacteria,2I60K@201174|Actinobacteria,2375A@1762|Mycobacteriaceae 201174|Actinobacteria M Protein conserved in bacteria - - - - - - - - - - - - Cadherin_3,RCC1_2 WXD2_k127_258813_1 215803.DB30_8136 4.357e-77 267.0 COG1968@1|root,COG1968@2|Bacteria,1MX02@1224|Proteobacteria,42N67@68525|delta/epsilon subdivisions,2WPKC@28221|Deltaproteobacteria,2YVGU@29|Myxococcales 28221|Deltaproteobacteria V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin uppP - 3.6.1.27 ko:K06153 ko00550,map00550 - R05627 RC00002 ko00000,ko00001,ko01000,ko01011 - - - BacA WXD2_k127_258813_2 445973.CLOBAR_02853 3.084e-46 173.0 COG0634@1|root,COG0634@2|Bacteria,1V1C9@1239|Firmicutes,24FR4@186801|Clostridia,25RBZ@186804|Peptostreptococcaceae 186801|Clostridia F Belongs to the purine pyrimidine phosphoribosyltransferase family hpt - 2.4.2.8 ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 - R00190,R01132,R01229,R02142,R08237,R08238,R08245 RC00063,RC00122 ko00000,ko00001,ko01000 - - - Pribosyltran WXD2_k127_258813_0 397278.JOJN01000001_gene2741 1.874e-82 279.0 COG0179@1|root,COG0179@2|Bacteria,2GN2G@201174|Actinobacteria,4DPHV@85009|Propionibacteriales 201174|Actinobacteria Q Domain of unknown function (DUF2437) fahA - - - - - - - - - - - DUF2437,FAA_hydrolase WXD2_k127_258813_3 1380390.JIAT01000014_gene6079 7.006e-33 140.0 COG0617@1|root,COG0617@2|Bacteria,2GMT1@201174|Actinobacteria,4CQTJ@84995|Rubrobacteria 84995|Rubrobacteria J Probable RNA and SrmB- binding site of polymerase A - - 2.7.7.19 ko:K00970 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - HD,PolyA_pol,PolyA_pol_RNAbd WXD2_k127_258813_5 1380390.JIAT01000010_gene4790 0.0002909 51.0 COG3595@1|root,COG3595@2|Bacteria,2HQA8@201174|Actinobacteria,4CRU5@84995|Rubrobacteria 84995|Rubrobacteria S Putative adhesin - - - - - - - - - - - - DUF4097 WXD2_k127_2598339_3 234267.Acid_2439 3.734e-30 125.0 COG1235@1|root,COG1235@2|Bacteria,3Y3DW@57723|Acidobacteria 57723|Acidobacteria S Metallo-beta-lactamase superfamily - - - - - - - - - - - - Lactamase_B_2 WXD2_k127_2598339_6 562743.JH976438_gene2046 2.254e-20 95.0 COG1828@1|root,COG1828@2|Bacteria,1VEH1@1239|Firmicutes,4HP0E@91061|Bacilli 91061|Bacilli F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL purS - 6.3.5.3 ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04463 RC00010,RC01160 ko00000,ko00001,ko00002,ko01000 - - iYO844.BSU06460 PurS WXD2_k127_2598339_1 696281.Desru_1280 2.257e-95 317.0 COG0047@1|root,COG0047@2|Bacteria,1TP1B@1239|Firmicutes,24A2E@186801|Clostridia,260V1@186807|Peptococcaceae 186801|Clostridia F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL purQ - 6.3.5.3 ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04463 RC00010,RC01160 ko00000,ko00001,ko00002,ko01000 - - - GATase_5 WXD2_k127_2598339_0 477974.Daud_1572 7.417e-280 874.0 COG0365@1|root,COG0365@2|Bacteria,1TQTI@1239|Firmicutes,24BRX@186801|Clostridia,260H8@186807|Peptococcaceae 186801|Clostridia H Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA acsA - 6.2.1.1 ko:K01895 ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200 M00357 R00235,R00236,R00316,R00926,R01354 RC00004,RC00012,RC00043,RC00070,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000,ko01004 - - - ACAS_N,AMP-binding,AMP-binding_C WXD2_k127_2598339_2 882082.SaccyDRAFT_2868 1.287e-61 220.0 COG1028@1|root,COG1028@2|Bacteria,2GMWG@201174|Actinobacteria,4E2QJ@85010|Pseudonocardiales 201174|Actinobacteria IQ Enoyl-(Acyl carrier protein) reductase phbB - 1.1.1.100,1.1.1.36 ko:K00023,ko:K00059 ko00061,ko00333,ko00630,ko00650,ko00780,ko01040,ko01100,ko01120,ko01130,ko01200,ko01212,map00061,map00333,map00630,map00650,map00780,map01040,map01100,map01120,map01130,map01200,map01212 M00083,M00373,M00572 R01779,R01977,R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00103,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short_C2 WXD2_k127_2598339_4 526227.Mesil_0339 3.663e-29 128.0 COG1216@1|root,COG1216@2|Bacteria 2|Bacteria V Glycosyl transferase, family 2 - - - - - - - - - - - - Glyco_tranf_2_2,Glyco_tranf_2_3,Glyco_transf_7C,Glycos_transf_2 WXD2_k127_2598339_5 1120973.AQXL01000119_gene594 1.923e-25 107.0 COG0125@1|root,COG0125@2|Bacteria,1V1HE@1239|Firmicutes,4HGWR@91061|Bacilli,278BR@186823|Alicyclobacillaceae 91061|Bacilli F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis tmk GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 ko:K00943 ko00240,ko01100,map00240,map01100 M00053 R02094,R02098 RC00002 ko00000,ko00001,ko00002,ko01000 - - iSB619.SA_RS02535 Thymidylate_kin WXD2_k127_26071_0 1125863.JAFN01000001_gene663 0.0 1620.0 COG0674@1|root,COG1013@1|root,COG1014@1|root,COG1149@1|root,COG0674@2|Bacteria,COG1013@2|Bacteria,COG1014@2|Bacteria,COG1149@2|Bacteria,1MVM0@1224|Proteobacteria,42MZ0@68525|delta/epsilon subdivisions,2WJ96@28221|Deltaproteobacteria 28221|Deltaproteobacteria C Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin poR - 1.2.7.1 ko:K03737 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00173,M00307 R01196,R10866 RC00004,RC02742 br01601,ko00000,ko00001,ko00002,ko01000 - - - EKR,Fer4_16,PFOR_II,POR,POR_N,TPP_enzyme_C WXD2_k127_26071_1 1121920.AUAU01000008_gene1590 3.373e-97 327.0 COG0167@1|root,COG0167@2|Bacteria,3Y464@57723|Acidobacteria 57723|Acidobacteria F Catalyzes the conversion of dihydroorotate to orotate - - 1.3.98.1 ko:K00226 ko00240,ko01100,map00240,map01100 M00051 R01867 RC00051 ko00000,ko00001,ko00002,ko01000 - - - DHO_dh WXD2_k127_26071_4 903818.KI912268_gene3202 1.097e-09 64.0 COG0614@1|root,COG0614@2|Bacteria,3Y8G5@57723|Acidobacteria 57723|Acidobacteria P PD-(D/E)XK nuclease superfamily - - - - - - - - - - - - PDDEXK_3 WXD2_k127_26071_3 903818.KI912268_gene3202 5.158e-36 145.0 COG0614@1|root,COG0614@2|Bacteria,3Y8G5@57723|Acidobacteria 57723|Acidobacteria P PD-(D/E)XK nuclease superfamily - - - - - - - - - - - - PDDEXK_3 WXD2_k127_26071_2 1267535.KB906767_gene4480 2.15e-65 228.0 COG4430@1|root,COG4430@2|Bacteria,3Y5HF@57723|Acidobacteria,2JMZY@204432|Acidobacteriia 204432|Acidobacteriia S Bacteriocin-protection, YdeI or OmpD-Associated - - - - - - - - - - - - OmdA WXD2_k127_2610245_3 1297570.MESS4_550063 3.927e-21 100.0 COG2852@1|root,COG2852@2|Bacteria,1N0QU@1224|Proteobacteria,2UFZ7@28211|Alphaproteobacteria 28211|Alphaproteobacteria S protein conserved in bacteria - - - - - - - - - - - - DUF559 WXD2_k127_2610245_4 1267534.KB906756_gene149 7.672e-17 92.0 2ESJ3@1|root,33K3T@2|Bacteria,3Y8Y6@57723|Acidobacteria,2JNTF@204432|Acidobacteriia 204432|Acidobacteriia S Antibiotic biosynthesis monooxygenase - - - - - - - - - - - - ABM WXD2_k127_2610245_2 379066.GAU_2567 3.734e-29 133.0 COG2755@1|root,COG2755@2|Bacteria,1ZU6K@142182|Gemmatimonadetes 142182|Gemmatimonadetes E lipolytic protein G-D-S-L family - - - - - - - - - - - - - WXD2_k127_2610245_0 313596.RB2501_06125 3.498e-128 431.0 COG0332@1|root,COG0332@2|Bacteria,4NEZE@976|Bacteroidetes,1HX81@117743|Flavobacteriia 976|Bacteroidetes I synthase fabH1 - 2.3.1.180 ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00082,M00083 R10707 RC00004,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - ACP_syn_III,ACP_syn_III_C WXD2_k127_2610245_1 640511.BC1002_4341 9.929e-34 139.0 COG2995@1|root,COG2995@2|Bacteria,1MWG1@1224|Proteobacteria,2VMXT@28216|Betaproteobacteria,1K5RP@119060|Burkholderiaceae 28216|Betaproteobacteria S paraquat-inducible protein A pqiA - - ko:K03808 - - - - ko00000 - - - PqiA WXD2_k127_2616618_1 404589.Anae109_0930 2.709e-15 91.0 COG0745@1|root,COG0745@2|Bacteria,1QYFT@1224|Proteobacteria,43CBY@68525|delta/epsilon subdivisions,2X7MT@28221|Deltaproteobacteria,2Z3GV@29|Myxococcales 28221|Deltaproteobacteria T Type II secretion system (T2SS), protein E, N-terminal domain - - - - - - - - - - - - Response_reg,T2SSE_N WXD2_k127_2616618_0 1173025.GEI7407_0763 1.184e-15 92.0 COG0642@1|root,COG2199@1|root,COG2203@1|root,COG2203@2|Bacteria,COG2205@2|Bacteria,COG3706@2|Bacteria,1G09B@1117|Cyanobacteria,1HABM@1150|Oscillatoriales 1117|Cyanobacteria T Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - - - - - - - - - - GAF,HATPase_c,HisKA,PAS,PAS_3,PAS_4,Response_reg WXD2_k127_2616618_2 1348663.KCH_05660 0.0004786 53.0 COG4403@1|root,COG4403@2|Bacteria,2I4VS@201174|Actinobacteria 201174|Actinobacteria V Lanthionine synthetase C-like protein - - - - - - - - - - - - LANC_like WXD2_k127_2616994_2 469383.Cwoe_5505 2.718e-05 56.0 COG5305@1|root,COG5305@2|Bacteria,2HPE5@201174|Actinobacteria,4CQS9@84995|Rubrobacteria 84995|Rubrobacteria S Membrane - - - - - - - - - - - - PMT_2 WXD2_k127_2616994_0 398525.KB900701_gene7528 3.564e-54 209.0 COG1835@1|root,COG1835@2|Bacteria,1MYYU@1224|Proteobacteria,2VAP1@28211|Alphaproteobacteria,3K11X@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria I Acyltransferase family - - - - - - - - - - - - Acyl_transf_3 WXD2_k127_2616994_1 314345.SPV1_07486 2.969e-38 146.0 COG0110@1|root,COG0110@2|Bacteria 2|Bacteria S O-acyltransferase activity - - 2.3.1.79 ko:K00661 - - - - ko00000,ko01000 - - - Hexapep,Hexapep_2 WXD2_k127_2633594_6 1279017.AQYJ01000026_gene22 6.72e-13 73.0 2DU2E@1|root,33NN7@2|Bacteria,1P5P1@1224|Proteobacteria,1SV3F@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_2633594_0 886293.Sinac_6907 2.376e-116 380.0 COG5649@1|root,COG5649@2|Bacteria,2IYNG@203682|Planctomycetes 203682|Planctomycetes S Domain of unknown function (DU1801) - - - - - - - - - - - - DUF1801 WXD2_k127_2633594_5 742727.HMPREF9447_03040 4.549e-20 104.0 COG4225@1|root,COG4225@2|Bacteria,4NGSJ@976|Bacteroidetes 976|Bacteroidetes E Glycosyl Hydrolase Family 88 - - - - - - - - - - - - Glyco_hydro_88 WXD2_k127_2633594_7 1267535.KB906767_gene3274 8.84e-10 66.0 2CIIF@1|root,30NI8@2|Bacteria,3Y8FJ@57723|Acidobacteria 57723|Acidobacteria - - - - - - - - - - - - - - - WXD2_k127_2633594_9 56780.SYN_03595 0.0002798 43.0 COG1484@1|root,COG1484@2|Bacteria,1MVU2@1224|Proteobacteria,42PXQ@68525|delta/epsilon subdivisions,2WKHU@28221|Deltaproteobacteria 28221|Deltaproteobacteria L PFAM IstB domain protein ATP-binding protein - - - - - - - - - - - - IstB_IS21 WXD2_k127_2633594_3 290397.Adeh_3638 1.573e-45 169.0 COG0590@1|root,COG0590@2|Bacteria,1RGU0@1224|Proteobacteria,42TVP@68525|delta/epsilon subdivisions,2WQ7U@28221|Deltaproteobacteria 28221|Deltaproteobacteria FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) tadA - 3.5.4.33 ko:K11991 - - R10223 RC00477 ko00000,ko01000,ko03016 - - - MafB19-deam WXD2_k127_2633594_1 404380.Gbem_0212 2.22e-97 340.0 COG2812@1|root,COG2812@2|Bacteria,1MVCK@1224|Proteobacteria,42M09@68525|delta/epsilon subdivisions,2WJ1G@28221|Deltaproteobacteria 28221|Deltaproteobacteria L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity dnaX - 2.7.7.7 ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_delta2,DNA_pol3_gamma3 WXD2_k127_2633594_4 1157490.EL26_20570 3.116e-26 110.0 COG0718@1|root,COG0718@2|Bacteria,1VA1S@1239|Firmicutes,4HKH3@91061|Bacilli,278JJ@186823|Alicyclobacillaceae 91061|Bacilli S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection yaaK - - ko:K09747 - - - - ko00000 - - - YbaB_DNA_bd WXD2_k127_2633594_2 398512.JQKC01000002_gene1974 3.321e-72 250.0 COG0353@1|root,COG0353@2|Bacteria,1TR87@1239|Firmicutes,2487H@186801|Clostridia,3WHNZ@541000|Ruminococcaceae 186801|Clostridia L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO recR - - ko:K06187 ko03440,map03440 - - - ko00000,ko00001,ko03400 - - - HHH,RecR,Toprim_4 WXD2_k127_26492_2 523791.Kkor_1177 1.148e-21 103.0 COG1670@1|root,COG1670@2|Bacteria,1RD77@1224|Proteobacteria,1SZ7D@1236|Gammaproteobacteria,1XRM3@135619|Oceanospirillales 135619|Oceanospirillales J Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_3 WXD2_k127_26492_3 1125863.JAFN01000001_gene2388 2.482e-16 89.0 COG3137@1|root,COG3137@2|Bacteria,1PWI2@1224|Proteobacteria,42W3Z@68525|delta/epsilon subdivisions 1224|Proteobacteria M Protein of unknown function, DUF481 - - - ko:K07283 - - - - ko00000 - - - DUF481 WXD2_k127_26492_0 861299.J421_0860 8.582e-67 233.0 COG2353@1|root,COG2353@2|Bacteria,1ZV1S@142182|Gemmatimonadetes 142182|Gemmatimonadetes S YceI-like domain - - - - - - - - - - - - YceI WXD2_k127_26492_1 204669.Acid345_2954 8.063e-31 127.0 COG1846@1|root,COG1846@2|Bacteria,3Y5EQ@57723|Acidobacteria,2JJWZ@204432|Acidobacteriia 204432|Acidobacteriia K helix_turn_helix multiple antibiotic resistance protein - - - - - - - - - - - - MarR,MarR_2 WXD2_k127_2652090_4 1499967.BAYZ01000084_gene3999 2.8e-86 300.0 COG1173@1|root,COG1173@2|Bacteria,2NQ14@2323|unclassified Bacteria 2|Bacteria EP PFAM binding-protein-dependent transport systems inner membrane component - - - ko:K02034 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - BPD_transp_1,OppC_N WXD2_k127_2652090_1 1499967.BAYZ01000076_gene838 5.38e-96 323.0 COG0601@1|root,COG0601@2|Bacteria 2|Bacteria P nitrogen compound transport - - - ko:K02033 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - BPD_transp_1 WXD2_k127_2652090_5 1379698.RBG1_1C00001G1510 1.104e-79 283.0 COG0312@1|root,COG0312@2|Bacteria,2NP7I@2323|unclassified Bacteria 2|Bacteria S Putative modulator of DNA gyrase tldE2 - - ko:K03592 - - - - ko00000,ko01002 - - - PmbA_TldD WXD2_k127_2652090_0 1379698.RBG1_1C00001G1511 2.319e-154 501.0 COG0312@1|root,COG0312@2|Bacteria,2NPIS@2323|unclassified Bacteria 2|Bacteria S Putative modulator of DNA gyrase tldD2 - - ko:K03568 - - - - ko00000,ko01002 - - - PmbA_TldD WXD2_k127_2652090_9 1205910.B005_5588 8.628e-22 109.0 COG0438@1|root,COG0438@2|Bacteria,2GN28@201174|Actinobacteria,4EI2D@85012|Streptosporangiales 201174|Actinobacteria M Glycosyl transferase 4-like domain - - - - - - - - - - - - Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1 WXD2_k127_2652090_7 1380390.JIAT01000011_gene2712 2.069e-57 218.0 COG0438@1|root,COG0438@2|Bacteria,2GN28@201174|Actinobacteria,4CSV6@84995|Rubrobacteria 84995|Rubrobacteria M Glycosyl transferase 4-like domain - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 WXD2_k127_2652090_8 1247726.MIM_c02940 2.814e-23 111.0 COG4632@1|root,COG4632@2|Bacteria,1PV1B@1224|Proteobacteria,2WB1E@28216|Betaproteobacteria,3T7GE@506|Alcaligenaceae 28216|Betaproteobacteria G Phosphodiester glycosidase - - - - - - - - - - - - NAGPA WXD2_k127_2652090_2 518766.Rmar_1316 6.526e-95 320.0 COG1087@1|root,COG1087@2|Bacteria,4NEM9@976|Bacteroidetes,1FJIC@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes M Polysaccharide biosynthesis protein galE - 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 - - - Epimerase,GDP_Man_Dehyd WXD2_k127_2652090_10 504832.OCAR_5818 1.246e-09 66.0 COG2148@1|root,COG2148@2|Bacteria,1MV6W@1224|Proteobacteria,2TRZA@28211|Alphaproteobacteria,3JSHU@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria M Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - ko:K03606 ko05111,map05111 - - - ko00000,ko00001 - - - Bac_transf,CoA_binding_3 WXD2_k127_2652090_6 1267535.KB906767_gene5418 4.541e-64 236.0 COG1215@1|root,COG1215@2|Bacteria 2|Bacteria M transferase activity, transferring glycosyl groups gt2M - - - - - - - - - - - Glyco_tranf_2_3,Glycos_transf_2 WXD2_k127_2652090_3 357808.RoseRS_2371 5.972e-88 306.0 COG0438@1|root,COG0438@2|Bacteria,2G9B8@200795|Chloroflexi,376I5@32061|Chloroflexia 32061|Chloroflexia H PFAM glycosyl transferase group 1 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 WXD2_k127_2652090_11 1407650.BAUB01000004_gene982 3.853e-05 52.0 COG0510@1|root,COG0510@2|Bacteria,1G6EX@1117|Cyanobacteria 1117|Cyanobacteria M Phosphotransferase enzyme family - - - - - - - - - - - - APH WXD2_k127_2658786_1 1033802.SSPSH_001573 4.293e-94 322.0 COG3202@1|root,COG3202@2|Bacteria,1MVP5@1224|Proteobacteria,1RNY6@1236|Gammaproteobacteria 1236|Gammaproteobacteria C ATP ADP translocase - - - ko:K03301 - - - - ko00000 2.A.12 - - MFS_1,TLC WXD2_k127_2658786_0 378806.STAUR_0942 1.177e-104 351.0 COG0656@1|root,COG0656@2|Bacteria,1MX6S@1224|Proteobacteria,4383U@68525|delta/epsilon subdivisions,2X3DT@28221|Deltaproteobacteria,2YVM7@29|Myxococcales 28221|Deltaproteobacteria S Aldo/keto reductase family - - - - - - - - - - - - Aldo_ket_red WXD2_k127_2658786_3 1123368.AUIS01000033_gene1380 3.216e-40 157.0 COG0727@1|root,COG0727@2|Bacteria 2|Bacteria S metal cluster binding - - - ko:K06940 - - - - ko00000 - - - CxxCxxCC WXD2_k127_2658786_2 234267.Acid_7247 4.63e-58 207.0 COG1595@1|root,COG1595@2|Bacteria,3Y815@57723|Acidobacteria 57723|Acidobacteria K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 WXD2_k127_2658786_4 234267.Acid_7246 5.598e-05 54.0 2BI39@1|root,32C8D@2|Bacteria,3Y85Y@57723|Acidobacteria 57723|Acidobacteria - - - - - - - - - - - - - - - WXD2_k127_2662778_8 43229.XP_007724308.1 4.583e-07 63.0 KOG1125@1|root,KOG1125@2759|Eukaryota,38C1T@33154|Opisthokonta,3NUGJ@4751|Fungi,3QK59@4890|Ascomycota,20BMT@147545|Eurotiomycetes,3MQS6@451870|Chaetothyriomycetidae 4751|Fungi S Tetratricopeptide repeat PEX5 GO:0000268,GO:0003674,GO:0005048,GO:0005052,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005778,GO:0005829,GO:0006082,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0015031,GO:0015833,GO:0015919,GO:0016020,GO:0016042,GO:0016043,GO:0016054,GO:0016558,GO:0016560,GO:0017038,GO:0019395,GO:0019752,GO:0030258,GO:0030674,GO:0031090,GO:0031903,GO:0032787,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034440,GO:0034613,GO:0042277,GO:0042579,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044743,GO:0045184,GO:0046395,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0055114,GO:0060090,GO:0065002,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072329,GO:0072594,GO:0072662,GO:0072663,GO:0098588,GO:0098805,GO:1901575,GO:1990351,GO:1990415,GO:1990429 - ko:K12261,ko:K13342 ko04146,map04146 - - - ko00000,ko00001,ko01000,ko04131 3.A.20.1 - - TPR_1,TPR_16,TPR_2,TPR_8 WXD2_k127_2662778_4 1499967.BAYZ01000195_gene3095 2.735e-44 183.0 COG0457@1|root,COG0457@2|Bacteria,2NPEN@2323|unclassified Bacteria 2|Bacteria S Tetratricopeptide repeat - - - - - - - - - - - - TPR_16,TPR_2,TPR_8 WXD2_k127_2662778_3 331678.Cphamn1_0845 9.763e-45 172.0 COG1947@1|root,COG1947@2|Bacteria,1FDN3@1090|Chlorobi 1090|Chlorobi F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol ispE - 2.7.1.148 ko:K00919 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05634 RC00002,RC01439 ko00000,ko00001,ko00002,ko01000 - - - GHMP_kinases_C,GHMP_kinases_N WXD2_k127_2662778_1 1140.Synpcc7942_0109 1.025e-73 261.0 COG0783@1|root,COG0783@2|Bacteria,1G586@1117|Cyanobacteria,1H0B1@1129|Synechococcus 1117|Cyanobacteria P Belongs to the Dps family dps - - ko:K04047 - - - - ko00000,ko03036 - - - Ferritin WXD2_k127_2662778_2 37919.EP51_00130 3.902e-58 208.0 COG1309@1|root,COG1309@2|Bacteria,2GM45@201174|Actinobacteria,4FXEM@85025|Nocardiaceae 201174|Actinobacteria K PFAM regulatory protein TetR - - - - - - - - - - - - TetR_C_6,TetR_N WXD2_k127_2662778_7 1463901.JOIY01000033_gene3591 1.736e-07 60.0 COG0824@1|root,COG0824@2|Bacteria,2IFZ9@201174|Actinobacteria 201174|Actinobacteria S Thioesterase superfamily - - - ko:K07107 - - - - ko00000,ko01000 - - - 4HBT WXD2_k127_2662778_6 768671.ThimaDRAFT_3983 6.112e-18 93.0 COG5642@1|root,COG5642@2|Bacteria,1QHRC@1224|Proteobacteria,1SGWX@1236|Gammaproteobacteria,1X276@135613|Chromatiales 135613|Chromatiales S Protein of unknown function (DUF2384) - - - - - - - - - - - - DUF2384 WXD2_k127_2662778_5 1562701.BBOF01000014_gene579 7.724e-40 155.0 COG5654@1|root,COG5654@2|Bacteria,1N6P3@1224|Proteobacteria,2VSGY@28216|Betaproteobacteria,1KFU4@119060|Burkholderiaceae 28216|Betaproteobacteria S RES - - - - - - - - - - - - RES WXD2_k127_2662778_0 1166018.FAES_1629 1.757e-127 416.0 COG1446@1|root,COG1446@2|Bacteria,4NF1U@976|Bacteroidetes,47K5N@768503|Cytophagia 976|Bacteroidetes E PFAM peptidase T2 asparaginase 2 - - 3.4.19.5 ko:K13051 - - - - ko00000,ko01000,ko01002 - - - Asparaginase_2 WXD2_k127_2671408_2 1089550.ATTH01000001_gene1159 1.044e-38 153.0 COG3332@1|root,COG3332@2|Bacteria,4NMX4@976|Bacteroidetes,1FJ9F@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes S Transport and Golgi organisation 2 - - - - - - - - - - - - TANGO2 WXD2_k127_2671408_0 1242864.D187_007079 4.274e-248 780.0 COG0457@1|root,COG0457@2|Bacteria,1NTKG@1224|Proteobacteria 1224|Proteobacteria S Tetratricopeptide repeat - - - - - - - - - - - - - WXD2_k127_2671408_1 760192.Halhy_2510 9.866e-104 359.0 COG1913@1|root,COG1913@2|Bacteria,4PMAZ@976|Bacteroidetes,1IRBZ@117747|Sphingobacteriia 976|Bacteroidetes S Domain of unknown function (DUF5117) - - - - - - - - - - - - DUF4953,DUF5117,DUF5118 WXD2_k127_2684348_2 1139219.I569_01473 4.689e-05 57.0 COG4485@1|root,COG4485@2|Bacteria,1TRR1@1239|Firmicutes,4HCR9@91061|Bacilli,4B16E@81852|Enterococcaceae 91061|Bacilli S Bacterial membrane protein YfhO XK27_10405 - - - - - - - - - - - YfhO WXD2_k127_2684348_1 1381123.AYOD01000014_gene2291 5.781e-10 71.0 COG0792@1|root,COG0792@2|Bacteria,1N6VN@1224|Proteobacteria,2UFTM@28211|Alphaproteobacteria,43K9V@69277|Phyllobacteriaceae 28211|Alphaproteobacteria L Belongs to the UPF0102 family MA20_24645 - - ko:K07460 - - - - ko00000 - - - UPF0102 WXD2_k127_2684348_0 1123256.KB907926_gene865 4.25e-113 387.0 COG0323@1|root,COG0323@2|Bacteria,1MV61@1224|Proteobacteria,1RM89@1236|Gammaproteobacteria,1X4XY@135614|Xanthomonadales 135614|Xanthomonadales L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex mutL GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - ko:K03572 ko03430,map03430 - - - ko00000,ko00001,ko03400 - - - DNA_mis_repair,HATPase_c_3,MutL_C WXD2_k127_2684348_3 469595.CSAG_03275 0.0001 51.0 COG2823@1|root,COG2823@2|Bacteria,1PCIJ@1224|Proteobacteria,1RRGP@1236|Gammaproteobacteria,3WXYA@544|Citrobacter 1236|Gammaproteobacteria S bacterial OsmY and nodulation domain osmY GO:0005575,GO:0005623,GO:0006457,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0009628,GO:0009987,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0050896,GO:0061077 - ko:K04065 - - - - ko00000 - - - BON WXD2_k127_2697237_5 234267.Acid_4153 1.892e-23 114.0 COG1538@1|root,COG1538@2|Bacteria,3Y5F3@57723|Acidobacteria 57723|Acidobacteria MU Outer membrane efflux protein - - - - - - - - - - - - OEP WXD2_k127_2697237_6 1303518.CCALI_01175 3.442e-22 98.0 COG0607@1|root,32YCZ@2|Bacteria 2|Bacteria P Sulfurtransferase - - - - - - - - - - - - DUF2892 WXD2_k127_2697237_4 401053.AciPR4_4178 4.816e-24 106.0 COG0640@1|root,COG0640@2|Bacteria,3Y5UV@57723|Acidobacteria,2JNP2@204432|Acidobacteriia 204432|Acidobacteriia K helix_turn_helix, Arsenical Resistance Operon Repressor - - - - - - - - - - - - HTH_20 WXD2_k127_2697237_7 1185876.BN8_01690 8.271e-22 99.0 COG2913@1|root,COG2913@2|Bacteria,4NYPJ@976|Bacteroidetes,47WT5@768503|Cytophagia 976|Bacteroidetes J Protein of unknown function (DUF3574) - - - - - - - - - - - - DUF3574 WXD2_k127_2697237_3 1121918.ARWE01000001_gene665 9.213e-41 154.0 COG1765@1|root,COG1765@2|Bacteria,1QF2G@1224|Proteobacteria,42UVN@68525|delta/epsilon subdivisions,2WQVS@28221|Deltaproteobacteria 28221|Deltaproteobacteria O PFAM OsmC family protein - - - - - - - - - - - - OsmC WXD2_k127_2697237_1 1121920.AUAU01000002_gene2046 8.79e-72 252.0 COG0457@1|root,COG0457@2|Bacteria,3Y4T0@57723|Acidobacteria 57723|Acidobacteria S Protein of unknown function (DUF2911) - - - - - - - - - - - - DUF2911 WXD2_k127_2697237_0 1379698.RBG1_1C00001G0518 8.096e-91 330.0 COG0515@1|root,COG0515@2|Bacteria,2NQNE@2323|unclassified Bacteria 2|Bacteria T Serine threonine protein kinase - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PASTA,Pkinase,TPR_2,TPR_8 WXD2_k127_2697237_2 1297742.A176_05669 1.466e-46 171.0 COG3214@1|root,COG3214@2|Bacteria,1N40B@1224|Proteobacteria 1224|Proteobacteria S protein conserved in bacteria ycaQ - - ko:K09927 - - - - ko00000 - - - HTH_42 WXD2_k127_2705418_0 1340493.JNIF01000004_gene721 2.573e-102 345.0 COG0416@1|root,COG0416@2|Bacteria,3Y3MM@57723|Acidobacteria 57723|Acidobacteria I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA plsX - 2.3.1.15 ko:K03621 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R00851,R09380 RC00004,RC00039,RC00041 ko00000,ko00001,ko00002,ko01000,ko01004 - - - FA_synthesis WXD2_k127_2705418_4 1267533.KB906734_gene4285 3.178e-20 93.0 COG0333@1|root,COG0333@2|Bacteria,3Y5HY@57723|Acidobacteria,2JNN2@204432|Acidobacteriia 204432|Acidobacteriia J Ribosomal L32p protein family - - - ko:K02911 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011,ko03029 - - - Ribosomal_L32p WXD2_k127_2705418_5 1449063.JMLS01000018_gene5845 7.306e-18 91.0 COG1399@1|root,COG1399@2|Bacteria,1VEXU@1239|Firmicutes,4HM44@91061|Bacilli,26UF3@186822|Paenibacillaceae 91061|Bacilli S metal-binding, possibly nucleic acid-binding protein - - - ko:K07040 - - - - ko00000 - - - DUF177 WXD2_k127_2705418_1 272134.KB731324_gene3647 2.613e-52 210.0 COG0438@1|root,COG0438@2|Bacteria,1G1WR@1117|Cyanobacteria,1HH57@1150|Oscillatoriales 1117|Cyanobacteria M Glycosyl transferases group 1 mtfB - - ko:K12993 - - - - ko00000,ko01000,ko01003,ko01005 - GT4 - Glyco_transf_4,Glycos_transf_1 WXD2_k127_2705418_3 479434.Sthe_0904 2.479e-40 163.0 COG0438@1|root,COG0438@2|Bacteria,2G5PS@200795|Chloroflexi,27XVU@189775|Thermomicrobia 189775|Thermomicrobia M Glycosyl transferase 4-like domain - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 WXD2_k127_2705418_2 869210.Marky_1657 3.561e-41 165.0 COG0438@1|root,COG0438@2|Bacteria,1WK9I@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus M PFAM Glycosyl transferases group 1 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 WXD2_k127_2708643_0 204669.Acid345_3065 2.611e-202 644.0 COG0644@1|root,COG2440@1|root,COG0644@2|Bacteria,COG2440@2|Bacteria,3Y5CQ@57723|Acidobacteria,2JKVX@204432|Acidobacteriia 204432|Acidobacteriia C Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S - - 1.5.5.1 ko:K00311 - - - - ko00000,ko01000 - - - ETF_QO WXD2_k127_2708643_1 264462.Bd0727 2.923e-84 312.0 COG3386@1|root,COG3391@1|root,COG3386@2|Bacteria,COG3391@2|Bacteria,1NT97@1224|Proteobacteria,42RMY@68525|delta/epsilon subdivisions,2WNJD@28221|Deltaproteobacteria 28221|Deltaproteobacteria G NHL repeat - - - - - - - - - - - - NHL WXD2_k127_2708643_2 1128421.JAGA01000002_gene372 1.132e-60 233.0 COG5617@1|root,COG5617@2|Bacteria 2|Bacteria M Psort location CytoplasmicMembrane, score - - - - - - - - - - - - PMT_2,PTPS_related WXD2_k127_2708643_3 378806.STAUR_1596 3.447e-54 204.0 COG0472@1|root,COG0472@2|Bacteria,1MWYW@1224|Proteobacteria,42NVY@68525|delta/epsilon subdivisions,2WKWM@28221|Deltaproteobacteria,2YU8T@29|Myxococcales 28221|Deltaproteobacteria M Glycosyl transferase family 4 - - 2.7.8.33,2.7.8.35 ko:K02851 - - R08856 RC00002 ko00000,ko01000,ko01003,ko01005 - - - Glycos_transf_4 WXD2_k127_2708643_4 67373.JOBF01000003_gene299 1.062e-09 71.0 COG0500@1|root,COG2226@2|Bacteria,2I34F@201174|Actinobacteria 201174|Actinobacteria Q Methionine biosynthesis protein MetW - - - - - - - - - - - - Methyltransf_11,Methyltransf_23 WXD2_k127_2723048_3 204669.Acid345_2980 6.446e-31 141.0 COG2373@1|root,COG2931@1|root,COG3391@1|root,COG2373@2|Bacteria,COG2931@2|Bacteria,COG3391@2|Bacteria,3Y59J@57723|Acidobacteria,2JJUR@204432|Acidobacteriia 204432|Acidobacteriia Q FG-GAP repeat - - - - - - - - - - - - Big_3_5,VCBS WXD2_k127_2723048_1 713586.KB900536_gene2659 2.52e-100 340.0 COG2801@1|root,COG2801@2|Bacteria,1N207@1224|Proteobacteria,1S1FB@1236|Gammaproteobacteria 1236|Gammaproteobacteria L COG2801 Transposase and inactivated derivatives - - - - - - - - - - - - HTH_28,HTH_32,LZ_Tnp_IS481,rve,rve_3 WXD2_k127_2723048_2 653733.Selin_0883 1.803e-36 159.0 COG1143@1|root,COG1143@2|Bacteria 2|Bacteria C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoI GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 ko:K00338,ko:K02573 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Fer4,Fer4_7 WXD2_k127_2723048_0 1123326.JFBL01000011_gene187 3.513e-156 507.0 COG0649@1|root,COG0649@2|Bacteria,1MVIN@1224|Proteobacteria,42M9G@68525|delta/epsilon subdivisions,2YMSC@29547|Epsilonproteobacteria 29547|Epsilonproteobacteria C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoC - 1.6.5.3 ko:K13378 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Complex1_30kDa,Complex1_49kDa WXD2_k127_272602_0 292459.STH2842 1.46e-255 796.0 COG3033@1|root,COG3033@2|Bacteria,1TRGV@1239|Firmicutes,248WC@186801|Clostridia 186801|Clostridia E Beta-eliminating lyase tpl - 4.1.99.2 ko:K01668 ko00350,map00350 - R00728 RC00355,RC00364 ko00000,ko00001,ko01000 - - - Beta_elim_lyase WXD2_k127_272602_4 880073.Calab_2035 1.159e-112 374.0 COG0543@1|root,COG0543@2|Bacteria,2NNUA@2323|unclassified Bacteria 2|Bacteria CH Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B gltA - 1.18.1.2,1.19.1.1,1.4.1.13,1.4.1.14 ko:K00266,ko:K00528,ko:K02823 ko00240,ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00240,map00250,map00910,map01100,map01110,map01120,map01130,map01230 - R00093,R00114,R00248,R10159 RC00006,RC00010,RC02799 ko00000,ko00001,ko01000 - - - DHODB_Fe-S_bind,Fer4_20,NAD_binding_1,Pyr_redox_2 WXD2_k127_272602_1 880073.Calab_2036 2.205e-203 643.0 COG0493@1|root,COG0493@2|Bacteria,2NNXN@2323|unclassified Bacteria 2|Bacteria E Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster gltA - 1.4.1.13,1.4.1.14 ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 - R00093,R00114,R00248 RC00006,RC00010,RC02799 ko00000,ko00001,ko01000 - - - DHODB_Fe-S_bind,Fer4_20,NAD_binding_1,Pyr_redox_2 WXD2_k127_272602_7 1408422.JHYF01000014_gene260 2.636e-60 216.0 COG2715@1|root,COG2715@2|Bacteria,1V1E2@1239|Firmicutes,249G0@186801|Clostridia,36E11@31979|Clostridiaceae 186801|Clostridia S Spore maturation protein spmA - - ko:K06373 - - - - ko00000 - - - Gate WXD2_k127_272602_8 717606.PaecuDRAFT_3320 4.587e-56 201.0 COG0700@1|root,COG0700@2|Bacteria,1V45M@1239|Firmicutes,4HH1Y@91061|Bacilli,26TSC@186822|Paenibacillaceae 91061|Bacilli S Spore maturation protein spmB - - ko:K06374 - - - - ko00000 - - - Gate WXD2_k127_272602_5 1442599.JAAN01000013_gene3673 2.75e-94 324.0 COG0531@1|root,COG0531@2|Bacteria,1MUA2@1224|Proteobacteria,1RQ1P@1236|Gammaproteobacteria,1X5A0@135614|Xanthomonadales 135614|Xanthomonadales E amino acid - - - - - - - - - - - - AA_permease_2 WXD2_k127_272602_3 234267.Acid_0057 1.269e-131 452.0 COG3653@1|root,COG3653@2|Bacteria,3Y3Q2@57723|Acidobacteria 57723|Acidobacteria Q D-aminoacylase domain protein - - 3.5.1.81,3.5.2.3 ko:K01465,ko:K06015 ko00240,ko01100,map00240,map01100 M00051 R01993,R02192 RC00064,RC00328,RC00632 ko00000,ko00001,ko00002,ko01000 - - - Amidohydro_3 WXD2_k127_272602_6 877455.Metbo_0119 1.697e-86 301.0 COG0019@1|root,arCOG02268@2157|Archaea,2XSY8@28890|Euryarchaeota,23NJI@183925|Methanobacteria 183925|Methanobacteria E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine lysA - 4.1.1.20 ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R00451 RC00299 ko00000,ko00001,ko00002,ko01000 - - - Orn_Arg_deC_N,Orn_DAP_Arg_deC WXD2_k127_272602_2 1453500.AT05_05035 2.958e-142 459.0 COG0207@1|root,COG0207@2|Bacteria,4NEC2@976|Bacteroidetes,1HX2F@117743|Flavobacteriia 976|Bacteroidetes F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis thyA - 2.1.1.45 ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 M00053 R02101 RC00219,RC00332 ko00000,ko00001,ko00002,ko01000 - - - Thymidylat_synt WXD2_k127_272602_9 1278073.MYSTI_06564 4.836e-49 182.0 COG0262@1|root,COG0262@2|Bacteria,1RH0P@1224|Proteobacteria,42UMS@68525|delta/epsilon subdivisions,2WQA3@28221|Deltaproteobacteria 28221|Deltaproteobacteria H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis folA - 1.5.1.3 ko:K00287,ko:K18589 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 M00126,M00840 R00936,R00937,R00939,R00940,R02235,R02236,R11765 RC00109,RC00110,RC00158 br01600,ko00000,ko00001,ko00002,ko01000,ko01504 - - - DHFR_1 WXD2_k127_272602_10 338966.Ppro_0715 9.454e-07 51.0 COG1364@1|root,COG1364@2|Bacteria,1MU0T@1224|Proteobacteria,42M6S@68525|delta/epsilon subdivisions,2WJU8@28221|Deltaproteobacteria,43TJH@69541|Desulfuromonadales 28221|Deltaproteobacteria H Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate argJ GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35 ko:K00620 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028 R00259,R02282 RC00004,RC00064 ko00000,ko00001,ko00002,ko01000 - - - ArgJ WXD2_k127_2749473_0 986075.CathTA2_0968 1.279e-150 491.0 COG0138@1|root,COG0138@2|Bacteria,1TPQ5@1239|Firmicutes,4H9YY@91061|Bacilli 91061|Bacilli F Bifunctional purine biosynthesis protein PurH purH - 2.1.2.3,3.5.4.10 ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 M00048 R01127,R04560 RC00026,RC00263,RC00456 ko00000,ko00001,ko00002,ko01000,ko04147 - - - AICARFT_IMPCHas,MGS WXD2_k127_2749473_2 1121937.AUHJ01000014_gene2613 1.163e-40 156.0 COG1778@1|root,COG1778@2|Bacteria,1RH85@1224|Proteobacteria,1S6D0@1236|Gammaproteobacteria,467ND@72275|Alteromonadaceae 1236|Gammaproteobacteria S Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate kdsC GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008781,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016311,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016791,GO:0019143,GO:0033692,GO:0034637,GO:0034645,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0070567,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 3.1.3.45 ko:K03270 ko00540,ko01100,map00540,map01100 M00063 R03350 RC00017 ko00000,ko00001,ko00002,ko01000,ko01005 - - iECO26_1355.ECO26_4302 Hydrolase_3 WXD2_k127_2749473_6 263358.VAB18032_28026 2.366e-14 85.0 COG0596@1|root,COG0596@2|Bacteria,2GNBX@201174|Actinobacteria,4DB3H@85008|Micromonosporales 201174|Actinobacteria K hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - - - - - - - - - - Abhydrolase_1 WXD2_k127_2749473_3 1384054.N790_09355 3.902e-29 132.0 COG4319@1|root,COG4319@2|Bacteria,1N361@1224|Proteobacteria,1S9P8@1236|Gammaproteobacteria,1X7TS@135614|Xanthomonadales 135614|Xanthomonadales S Domain of unknown function (DUF4440) - - - - - - - - - - - - DUF4440,SnoaL_2,SnoaL_3 WXD2_k127_2749473_1 204669.Acid345_1338 1.261e-130 424.0 COG0506@1|root,COG0506@2|Bacteria,3Y2G8@57723|Acidobacteria,2JHRI@204432|Acidobacteriia 204432|Acidobacteriia E Proline dehydrogenase - - - ko:K00318 ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130 - R10507 RC00083 ko00000,ko00001,ko01000 - - - Pro_dh WXD2_k127_2749473_5 1121445.ATUZ01000011_gene628 2.907e-23 112.0 COG1040@1|root,COG1040@2|Bacteria,1RHAV@1224|Proteobacteria,42TFK@68525|delta/epsilon subdivisions,2WPQG@28221|Deltaproteobacteria,2MGET@213115|Desulfovibrionales 28221|Deltaproteobacteria S competence protein - - - - - - - - - - - - Pribosyltran WXD2_k127_2749473_4 1297581.H919_02937 5.29e-26 117.0 COG2905@1|root,COG2905@2|Bacteria,1VW3X@1239|Firmicutes,4ISMH@91061|Bacilli,21XBR@150247|Anoxybacillus 91061|Bacilli T Domain in cystathionine beta-synthase and other proteins. - - - - - - - - - - - - CBS WXD2_k127_2767512_3 661478.OP10G_4294 1.929e-50 192.0 COG2267@1|root,COG2267@2|Bacteria 2|Bacteria I carboxylic ester hydrolase activity - - 3.4.11.5 ko:K01259 ko00330,map00330 - R00135 - ko00000,ko00001,ko01000,ko01002 - - - Abhydrolase_1 WXD2_k127_2767512_2 204669.Acid345_4432 2.232e-166 544.0 COG2203@1|root,COG2206@1|root,COG3437@1|root,COG2203@2|Bacteria,COG2206@2|Bacteria,COG3437@2|Bacteria,3Y61X@57723|Acidobacteria 57723|Acidobacteria T HD domain - - - - - - - - - - - - GAF,HD_5 WXD2_k127_2767512_1 1089547.KB913013_gene2767 5.036e-199 631.0 COG1228@1|root,COG1228@2|Bacteria,4NG0U@976|Bacteroidetes,47NDK@768503|Cytophagia 976|Bacteroidetes Q Amidohydrolase family - - - - - - - - - - - - Amidohydro_1 WXD2_k127_2767512_5 1144275.COCOR_06747 1.09e-21 104.0 COG1413@1|root,COG1413@2|Bacteria,1NB0I@1224|Proteobacteria 1224|Proteobacteria C response to radiation yibA GO:0006950,GO:0006974,GO:0008150,GO:0009314,GO:0009628,GO:0009987,GO:0033554,GO:0042221,GO:0046677,GO:0050896,GO:0051716 - - - - - - - - - - HEAT_2,HEAT_PBS WXD2_k127_2767512_6 1122604.JONR01000007_gene2935 5.551e-20 95.0 2B7EF@1|root,320I7@2|Bacteria,1NDV8@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - PSCyt1 WXD2_k127_2767512_8 525257.HMPREF0204_11744 7.195e-14 82.0 COG3637@1|root,COG3637@2|Bacteria,4NE33@976|Bacteroidetes,1HXMD@117743|Flavobacteriia,3ZPHR@59732|Chryseobacterium 976|Bacteroidetes M Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - - - - - - - - - - - WXD2_k127_2767512_7 1458357.BG58_39455 8.46e-18 95.0 2CNNA@1|root,32SHE@2|Bacteria,1NJ9Q@1224|Proteobacteria,2W3KR@28216|Betaproteobacteria 28216|Betaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_2767512_4 886293.Sinac_2313 1.078e-21 102.0 COG1011@1|root,COG1011@2|Bacteria,2J12R@203682|Planctomycetes 203682|Planctomycetes S TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED - - 3.1.3.10 ko:K20866 ko00010,ko01120,map00010,map01120 - R00947 RC00078 ko00000,ko00001,ko01000 - - - HAD_2 WXD2_k127_2767512_0 1382306.JNIM01000001_gene2570 6.678e-254 794.0 COG4799@1|root,COG4799@2|Bacteria,2G61R@200795|Chloroflexi 200795|Chloroflexi I PFAM carboxyl transferase - - 2.1.3.15,6.4.1.3,6.4.1.4 ko:K01969,ko:K15052 ko00280,ko00720,ko01100,ko01200,map00280,map00720,map01100,map01200 M00036,M00376 R01859,R04138 RC00097,RC00367,RC00609,RC00942 ko00000,ko00001,ko00002,ko01000 - - - Carboxyl_trans WXD2_k127_2771164_2 204669.Acid345_4296 2.047e-77 276.0 COG0568@1|root,COG0568@2|Bacteria,3Y2XG@57723|Acidobacteria,2JHX1@204432|Acidobacteriia 204432|Acidobacteriia K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth sigA - - ko:K03086 - - - - ko00000,ko03021 - - - Sigma70_r1_1,Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4 WXD2_k127_2771164_1 269799.Gmet_0394 3.09e-97 339.0 COG0358@1|root,COG0358@2|Bacteria,1MUHC@1224|Proteobacteria,42MDZ@68525|delta/epsilon subdivisions,2WJ9Y@28221|Deltaproteobacteria,43TUI@69541|Desulfuromonadales 28221|Deltaproteobacteria L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication dnaG - - ko:K02316 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - DnaB_bind,Toprim_2,Toprim_4,Toprim_N,zf-CHC2 WXD2_k127_2771164_0 1121346.KB899815_gene1901 3.457e-127 436.0 COG1193@1|root,COG1193@2|Bacteria,1TP5W@1239|Firmicutes,4H9NZ@91061|Bacilli,26R22@186822|Paenibacillaceae 91061|Bacilli L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity mutS2 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - ko:K07456 ko03430,map03430 - - - ko00000,ko00001,ko03400 - - - MutS_V,Smr WXD2_k127_2771164_3 1121920.AUAU01000013_gene1762 6.816e-22 100.0 COG0828@1|root,COG0828@2|Bacteria 2|Bacteria J Belongs to the bacterial ribosomal protein bS21 family rpsU GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02970 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S21 WXD2_k127_2771613_0 1123373.ATXI01000024_gene100 2.5e-55 200.0 COG1702@1|root,COG1702@2|Bacteria,2GGQM@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria T PhoH-like protein - - - ko:K06217 - - - - ko00000 - - - PhoH WXD2_k127_2771613_1 665571.STHERM_c08060 1.374e-28 123.0 COG0742@1|root,COG0742@2|Bacteria,2J7B5@203691|Spirochaetes 203691|Spirochaetes L RNA methyltransferase, RsmD family yhhF - - - - - - - - - - - Cons_hypoth95 WXD2_k127_2773723_1 234267.Acid_6308 2.293e-29 138.0 COG2304@1|root,COG2304@2|Bacteria,3Y2PC@57723|Acidobacteria 57723|Acidobacteria S von Willebrand factor, type A - - - - - - - - - - - - VWA,VWA_2 WXD2_k127_2773723_2 1047013.AQSP01000088_gene1632 4.181e-18 100.0 COG0457@1|root,COG4783@1|root,COG0457@2|Bacteria,COG4783@2|Bacteria,2NR7I@2323|unclassified Bacteria 2|Bacteria S Tetratricopeptide repeat - - - ko:K08309 - - - - ko00000,ko01000,ko01011 - GH23 - BatD,TPR_16,TPR_2,TPR_6,TPR_8 WXD2_k127_2773723_0 204669.Acid345_2506 4.394e-34 152.0 COG2304@1|root,COG2304@2|Bacteria,3Y2IE@57723|Acidobacteria,2JI1J@204432|Acidobacteriia 204432|Acidobacteriia S von Willebrand factor (vWF) type A domain - - - ko:K07114 - - - - ko00000,ko02000 1.A.13.2.2,1.A.13.2.3 - - VWA,VWA_2 WXD2_k127_2773723_3 1047013.AQSP01000100_gene600 1.834e-06 61.0 COG4219@1|root,COG4219@2|Bacteria 2|Bacteria - - - - - ko:K03646 - - - - ko00000,ko02000 2.C.1.2 - - DUF4367,TonB_C WXD2_k127_2778870_0 211586.SO_0341 2.752e-126 442.0 COG2202@1|root,COG3292@1|root,COG5001@1|root,COG2202@2|Bacteria,COG3292@2|Bacteria,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,1RM8A@1236|Gammaproteobacteria,2Q8ZG@267890|Shewanellaceae 1236|Gammaproteobacteria T Two component regulator three Y domain protein - - - - - - - - - - - - EAL,GGDEF,PAS_3,PAS_9,Reg_prop,Y_Y_Y WXD2_k127_2778870_1 1120970.AUBZ01000007_gene2953 3.964e-102 349.0 COG2942@1|root,COG2942@2|Bacteria,1RAGB@1224|Proteobacteria,1S34A@1236|Gammaproteobacteria 1236|Gammaproteobacteria G 2-epimerase VPA0780 - - - - - - - - - - - GlcNAc_2-epim WXD2_k127_2783353_10 246197.MXAN_1103 3.744e-44 163.0 COG0034@1|root,COG0034@2|Bacteria,1MU0V@1224|Proteobacteria,42MDB@68525|delta/epsilon subdivisions,2WITV@28221|Deltaproteobacteria,2YTTF@29|Myxococcales 28221|Deltaproteobacteria F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine purF - 2.4.2.14 ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048 R01072 RC00010,RC02724,RC02752 ko00000,ko00001,ko00002,ko01000,ko01002 - - - GATase_6,GATase_7,Pribosyltran WXD2_k127_2783353_9 404380.Gbem_2014 4.248e-47 177.0 2ADQJ@1|root,313FX@2|Bacteria,1MYNR@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - WXD2_k127_2783353_0 756067.MicvaDRAFT_0319 3.379e-165 558.0 COG3829@1|root,COG5001@1|root,COG3829@2|Bacteria,COG5001@2|Bacteria,1G0SY@1117|Cyanobacteria,1H7V4@1150|Oscillatoriales 1117|Cyanobacteria T signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - - - - - - - - - - EAL,GGDEF,PAS,PAS_7,PAS_8,PAS_9,Response_reg WXD2_k127_2783353_6 1303518.CCALI_01109 1.216e-92 317.0 COG0665@1|root,COG0665@2|Bacteria 2|Bacteria E tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity - - 1.5.3.1 ko:K00303 ko00260,ko01100,map00260,map01100 - R00610 RC00060,RC00557 ko00000,ko00001,ko01000 - - - DAO WXD2_k127_2783353_7 215803.DB30_0760 2.084e-72 261.0 COG1834@1|root,COG1834@2|Bacteria,1MZ9U@1224|Proteobacteria,42PPN@68525|delta/epsilon subdivisions,2WK8S@28221|Deltaproteobacteria,2Z1ED@29|Myxococcales 28221|Deltaproteobacteria E Amidinotransferase - - 3.5.3.18 ko:K01482 - - - - ko00000,ko01000,ko04147 - - - Amidinotransf WXD2_k127_2783353_12 1254432.SCE1572_07230 5.974e-18 93.0 COG1073@1|root,COG1073@2|Bacteria,1PBV5@1224|Proteobacteria,433TK@68525|delta/epsilon subdivisions,2X3EJ@28221|Deltaproteobacteria,2YVQG@29|Myxococcales 28221|Deltaproteobacteria S Uncharacterised protein family (UPF0227) - - - ko:K07000 - - - - ko00000 - - - UPF0227 WXD2_k127_2783353_8 1502770.JQMG01000001_gene815 2.062e-64 226.0 COG2114@1|root,COG2114@2|Bacteria,1PZ5K@1224|Proteobacteria,2W3A8@28216|Betaproteobacteria 28216|Betaproteobacteria T Adenylyl- / guanylyl cyclase, catalytic domain - - - - - - - - - - - - Guanylate_cyc WXD2_k127_2783353_3 1123368.AUIS01000001_gene2062 4.68e-124 436.0 COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,1RM8A@1236|Gammaproteobacteria,2NDJD@225057|Acidithiobacillales 225057|Acidithiobacillales T Diguanylate cyclase - - - - - - - - - - - - EAL,GAF_2,GGDEF,PAS_4,Response_reg WXD2_k127_2783353_1 313606.M23134_02751 9.453e-152 495.0 COG0427@1|root,COG0427@2|Bacteria,4NFS3@976|Bacteroidetes,47M24@768503|Cytophagia 976|Bacteroidetes C PFAM Acetyl-CoA hydrolase transferase - - - - - - - - - - - - AcetylCoA_hyd_C,AcetylCoA_hydro WXD2_k127_2783353_4 760192.Halhy_2786 8.59e-120 395.0 COG0457@1|root,COG0457@2|Bacteria,4NEYK@976|Bacteroidetes 976|Bacteroidetes S Protein of unknown function (DUF2911) - - - - - - - - - - - - DUF2911 WXD2_k127_2783353_5 797114.C475_19128 6.234e-119 393.0 COG0477@1|root,arCOG00130@2157|Archaea,2XT8X@28890|Euryarchaeota,23TJU@183963|Halobacteria 183963|Halobacteria G COG0477 Permeases of the major facilitator superfamily - - - - - - - - - - - - MFS_1 WXD2_k127_2783353_2 330214.NIDE4312 2.255e-132 430.0 COG0330@1|root,COG0330@2|Bacteria,3J0NF@40117|Nitrospirae 40117|Nitrospirae O prohibitin homologues - - - - - - - - - - - - Band_7 WXD2_k127_2783353_11 1340493.JNIF01000003_gene1314 1.896e-19 93.0 COG1585@1|root,COG1585@2|Bacteria 2|Bacteria OU cellular response to DNA damage stimulus - - - ko:K07340 - - - - ko00000 - - - NfeD WXD2_k127_2795119_4 215803.DB30_8463 1.007e-39 151.0 COG2076@1|root,COG2076@2|Bacteria,1MZ6P@1224|Proteobacteria,42TM1@68525|delta/epsilon subdivisions,2WRSH@28221|Deltaproteobacteria,2YVKN@29|Myxococcales 28221|Deltaproteobacteria U Small Multidrug Resistance protein sugE - - ko:K11741 - - - - ko00000,ko02000 2.A.7.1 - - Multi_Drug_Res WXD2_k127_2795119_1 1173028.ANKO01000038_gene4764 1.103e-106 359.0 COG3227@1|root,COG3227@2|Bacteria,1G3KW@1117|Cyanobacteria,1H7JS@1150|Oscillatoriales 1117|Cyanobacteria E Thermolysin metallopeptidase, alpha-helical domain - - - - - - - - - - - - FTP,Peptidase_M4,Peptidase_M4_C WXD2_k127_2795119_0 1122599.AUGR01000012_gene854 2.78e-225 715.0 COG0441@1|root,COG0441@2|Bacteria,1MUP2@1224|Proteobacteria,1RMYE@1236|Gammaproteobacteria,1XI6X@135619|Oceanospirillales 135619|Oceanospirillales J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) thrS - 6.1.1.3 ko:K01868 ko00970,map00970 M00359,M00360 R03663 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - HGTP_anticodon,TGS,tRNA-synt_2b,tRNA_SAD WXD2_k127_2795119_2 1305735.JAFT01000005_gene3241 1.168e-54 197.0 COG0290@1|root,COG0290@2|Bacteria,1RDD2@1224|Proteobacteria,2U58Z@28211|Alphaproteobacteria,2PC88@252301|Oceanicola 28211|Alphaproteobacteria J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins infC GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - ko:K02520 - - - - ko00000,ko03012,ko03029 - - - IF3_C,IF3_N WXD2_k127_2795119_6 760568.Desku_0640 3.176e-17 85.0 COG0291@1|root,COG0291@2|Bacteria,1VF5W@1239|Firmicutes,24QJD@186801|Clostridia,262US@186807|Peptococcaceae 186801|Clostridia J Belongs to the bacterial ribosomal protein bL35 family rpmI - - ko:K02916 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L35p WXD2_k127_2795119_5 1382359.JIAL01000001_gene595 7.574e-36 140.0 COG0292@1|root,COG0292@2|Bacteria,3Y4SW@57723|Acidobacteria,2JJJ2@204432|Acidobacteriia 204432|Acidobacteriia J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit rplT - - ko:K02887 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L20 WXD2_k127_2795119_3 743721.Psesu_0755 1.642e-41 169.0 COG1131@1|root,COG1131@2|Bacteria,1R9P3@1224|Proteobacteria,1S39R@1236|Gammaproteobacteria,1X5CQ@135614|Xanthomonadales 135614|Xanthomonadales V ABC-type multidrug transport system, ATPase component - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran WXD2_k127_2795119_7 1120971.AUCA01000003_gene1386 3.711e-17 86.0 COG1725@1|root,COG1725@2|Bacteria,1VFD0@1239|Firmicutes,4HNIT@91061|Bacilli,27A9H@186823|Alicyclobacillaceae 91061|Bacilli K helix_turn_helix gluconate operon transcriptional repressor ytrA - - ko:K07979 - - - - ko00000,ko03000 - - - GntR WXD2_k127_2819718_2 671143.DAMO_2768 2.252e-35 141.0 COG0071@1|root,COG0071@2|Bacteria,2NPWF@2323|unclassified Bacteria 2|Bacteria O Belongs to the small heat shock protein (HSP20) family hspA-1 - - ko:K13993 ko04141,map04141 - - - ko00000,ko00001,ko03110 - - - HSP20 WXD2_k127_2819718_0 1452718.JBOY01000135_gene1460 1.952e-210 669.0 COG0459@1|root,COG0459@2|Bacteria,1PMNK@1224|Proteobacteria,1S07M@1236|Gammaproteobacteria 1236|Gammaproteobacteria O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions - - - ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 - - - ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 - - - Cpn60_TCP1 WXD2_k127_2819718_3 797304.Natgr_0422 8.314e-12 77.0 COG0589@1|root,COG0633@1|root,arCOG00449@2157|Archaea,arCOG02844@2157|Archaea,2XU1P@28890|Euryarchaeota,23SZU@183963|Halobacteria 183963|Halobacteria T COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - - - - - - - - - - Fer2,Usp WXD2_k127_2819718_4 479436.Vpar_1715 7.907e-07 61.0 COG2846@1|root,COG2846@2|Bacteria,1UYJV@1239|Firmicutes,4H22Y@909932|Negativicutes 909932|Negativicutes D Di-iron-containing protein involved in the repair of iron-sulfur clusters - - - ko:K07322 - - - - ko00000 - - - Hemerythrin,ScdA_N WXD2_k127_2819718_1 713586.KB900536_gene373 8.784e-75 273.0 COG2199@1|root,COG3829@1|root,COG3706@2|Bacteria,COG3829@2|Bacteria,1REBC@1224|Proteobacteria 1224|Proteobacteria T PFAM GGDEF domain containing protein - - - - - - - - - - - - GGDEF WXD2_k127_2826570_1 1047013.AQSP01000071_gene1933 6.807e-130 439.0 COG0768@1|root,COG0768@2|Bacteria,2NNYI@2323|unclassified Bacteria 2|Bacteria M Penicillin-binding protein 2 mrdA GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042493,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0045229,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0071972,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 3.4.16.4 ko:K05515 ko00550,ko01501,map00550,map01501 - - - ko00000,ko00001,ko01000,ko01011 - - iAF987.Gmet_0928,iEcE24377_1341.EcE24377A_0661,iPC815.YPO2604 PBP_dimer,Transpeptidase WXD2_k127_2826570_2 204669.Acid345_1466 2.16e-80 282.0 COG0772@1|root,COG0772@2|Bacteria,3Y3DZ@57723|Acidobacteria,2JINX@204432|Acidobacteriia 204432|Acidobacteriia M Peptidoglycan polymerase that is essential for cell wall elongation rodA - - ko:K05837 - - - - ko00000,ko03036 - - - FTSW_RODA_SPOVE WXD2_k127_2826570_4 1896.JOAU01000004_gene238 1.546e-22 101.0 COG1188@1|root,COG1188@2|Bacteria,2IQ6F@201174|Actinobacteria 201174|Actinobacteria J Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit S4 paralog hslR - - ko:K04762 - - - - ko00000,ko03110 - - - S4 WXD2_k127_2826570_3 234267.Acid_5168 2.242e-27 113.0 COG0776@1|root,COG0776@2|Bacteria,3Y4U4@57723|Acidobacteria 57723|Acidobacteria L bacterial (prokaryotic) histone like domain - - - ko:K03530 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding WXD2_k127_2826570_0 290397.Adeh_2348 1.816e-194 619.0 COG0518@1|root,COG0519@1|root,COG0518@2|Bacteria,COG0519@2|Bacteria,1MU2A@1224|Proteobacteria,42M0I@68525|delta/epsilon subdivisions,2WJ6D@28221|Deltaproteobacteria,2YTZV@29|Myxococcales 28221|Deltaproteobacteria F Catalyzes the synthesis of GMP from XMP guaA GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002 - - - GATase,GMP_synt_C,NAD_synthase,tRNA_Me_trans WXD2_k127_2832963_0 667014.Thein_1286 4e-323 1013.0 COG0653@1|root,COG0653@2|Bacteria,2GGR1@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane secA - - ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4 - - Helicase_C,SEC-C,SecA_DEAD,SecA_PP_bind,SecA_SW WXD2_k127_2832963_3 469383.Cwoe_4579 4.395e-35 153.0 COG1994@1|root,COG1994@2|Bacteria,2H6BD@201174|Actinobacteria,4CS7E@84995|Rubrobacteria 84995|Rubrobacteria S Peptidase M50 - - - - - - - - - - - - - WXD2_k127_2832963_4 204669.Acid345_2404 2.117e-30 122.0 arCOG03092@1|root,32YMQ@2|Bacteria 2|Bacteria S Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure gvpA - - - - - - - - - - - Gas_vesicle WXD2_k127_2832963_6 1519464.HY22_01790 5.627e-23 102.0 2E5BC@1|root,3303G@2|Bacteria 2|Bacteria S Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth gvpJ - - - - - - - - - - - Gas_vesicle WXD2_k127_2832963_5 479434.Sthe_0881 1.387e-24 111.0 arCOG06390@1|root,330IR@2|Bacteria 2|Bacteria S Gas vesicle protein K gvpK - - - - - - - - - - - Gas_vesicle,GvpK WXD2_k127_2832963_9 1121422.AUMW01000016_gene2089 1.587e-10 63.0 2DJCY@1|root,305NK@2|Bacteria,1TYFT@1239|Firmicutes,256D7@186801|Clostridia,266HZ@186807|Peptococcaceae 186801|Clostridia S Gas vesicle protein - - - - - - - - - - - - Gas_vesicle WXD2_k127_2832963_8 479434.Sthe_0877 2.178e-16 92.0 2BI1G@1|root,32C67@2|Bacteria,2G930@200795|Chloroflexi 200795|Chloroflexi S Gas vesicle synthesis protein GvpL/GvpF - - - - - - - - - - - - GvpL_GvpF WXD2_k127_2832963_1 861299.J421_0942 4.28e-91 323.0 COG0003@1|root,COG0003@2|Bacteria,1ZVAB@142182|Gemmatimonadetes 142182|Gemmatimonadetes P Anion-transporting ATPase - - 3.6.3.16 ko:K01551 - - - - ko00000,ko01000,ko02000 3.A.19.1,3.A.21.1,3.A.4.1 - - ArsA_ATPase WXD2_k127_2832963_2 1173028.ANKO01000117_gene5926 1.11e-54 201.0 COG5285@1|root,COG5285@2|Bacteria,1GA55@1117|Cyanobacteria 1117|Cyanobacteria Q Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin - - - - - - - - - - - - PhyH WXD2_k127_2837560_1 644966.Tmar_0901 1.8e-254 818.0 COG0045@1|root,COG1042@1|root,COG1670@1|root,COG0045@2|Bacteria,COG1042@2|Bacteria,COG1670@2|Bacteria,1TPTQ@1239|Firmicutes,249CX@186801|Clostridia,3WD0A@538999|Clostridiales incertae sedis 186801|Clostridia C TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain - - 6.2.1.13 ko:K01905,ko:K22224 ko00010,ko00620,ko00640,ko01100,ko01120,map00010,map00620,map00640,map01100,map01120 - R00229,R00920 RC00004,RC00012,RC00014 ko00000,ko00001,ko01000,ko01004 - - - ATP-grasp_5,Acetyltransf_1,CoA_binding_2,Succ_CoA_lig WXD2_k127_2837560_4 1541065.JRFE01000015_gene368 5.168e-21 107.0 COG2516@1|root,COG2516@2|Bacteria,1G28Q@1117|Cyanobacteria,3VJCD@52604|Pleurocapsales 1117|Cyanobacteria S Elongator protein 3, MiaB family, Radical SAM - - - - - - - - - - - - Radical_SAM WXD2_k127_2837560_5 290397.Adeh_0475 2.27e-17 85.0 COG0298@1|root,COG0298@2|Bacteria 2|Bacteria O carbon dioxide binding hypC - - ko:K04653,ko:K04654 - - - - ko00000 - - - HupF_HypC WXD2_k127_2837560_6 864702.OsccyDRAFT_2016 2.378e-08 64.0 COG0299@1|root,COG0299@2|Bacteria,1G11D@1117|Cyanobacteria,1H8P1@1150|Oscillatoriales 1117|Cyanobacteria F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate purN - 2.1.2.2 ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 M00048 R04325,R04326 RC00026,RC00197,RC01128 ko00000,ko00001,ko00002,ko01000 - - iJN678.purN Formyl_trans_N WXD2_k127_2837560_2 204669.Acid345_0817 5.413e-92 315.0 COG0535@1|root,COG0535@2|Bacteria,3Y2KT@57723|Acidobacteria,2JIDX@204432|Acidobacteriia 204432|Acidobacteriia C Iron-sulfur cluster-binding domain - - - - - - - - - - - - Fer4_12,Radical_SAM,SPASM WXD2_k127_2837560_3 414684.RC1_3281 1.343e-56 211.0 COG0778@1|root,COG0778@2|Bacteria,1NTK9@1224|Proteobacteria,2TR3E@28211|Alphaproteobacteria,2JUCS@204441|Rhodospirillales 204441|Rhodospirillales C Nitroreductase - - - - - - - - - - - - - WXD2_k127_2837560_0 41431.PCC8801_3918 2.176e-259 813.0 COG0674@1|root,COG1013@1|root,COG1014@1|root,COG1145@1|root,COG0674@2|Bacteria,COG1013@2|Bacteria,COG1014@2|Bacteria,COG1145@2|Bacteria,1G2E2@1117|Cyanobacteria,3KGSH@43988|Cyanothece 1117|Cyanobacteria C Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin nifJ GO:0003674,GO:0003824,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016491,GO:0050896,GO:0055114 1.2.7.1 ko:K03737 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00173,M00307 R01196,R10866 RC00004,RC02742 br01601,ko00000,ko00001,ko00002,ko01000 - - iJN678.nifJ EKR,Fer4_16,PFOR_II,POR,POR_N,TPP_enzyme_C WXD2_k127_2840631_2 204669.Acid345_2692 7.331e-14 82.0 COG1196@1|root,COG1196@2|Bacteria 2|Bacteria D nuclear chromosome segregation - - - - - - - - - - - - - WXD2_k127_2840631_0 558884.JRGM01000032_gene590 2.467e-32 146.0 COG0741@1|root,COG0741@2|Bacteria,1MV3F@1224|Proteobacteria,1RMS8@1236|Gammaproteobacteria,1Y3XM@135624|Aeromonadales 135624|Aeromonadales M Soluble lytic murein transglycosylase slt - - ko:K08309 - - - - ko00000,ko01000,ko01011 - GH23 - SLT,SLT_L WXD2_k127_2840631_1 643867.Ftrac_1444 4.192e-26 121.0 COG1225@1|root,COG1225@2|Bacteria,4NMEK@976|Bacteroidetes,47Y1N@768503|Cytophagia 976|Bacteroidetes O PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - - - - - - - - - - AhpC-TSA WXD2_k127_2841942_2 1047013.AQSP01000083_gene1193 5.729e-15 83.0 COG0308@1|root,COG0308@2|Bacteria,2NPGQ@2323|unclassified Bacteria 2|Bacteria E aminopeptidase - - - - - - - - - - - - BPD_transp_1,PD40,Peptidase_M1 WXD2_k127_2841942_0 555088.DealDRAFT_0356 9.691e-176 588.0 COG1074@1|root,COG1074@2|Bacteria,1TQ35@1239|Firmicutes,248ZF@186801|Clostridia,42JHW@68298|Syntrophomonadaceae 186801|Clostridia L ATP-dependent helicase nuclease subunit A - - 3.6.4.12 ko:K16898 - - - - ko00000,ko01000,ko03400 - - - PDDEXK_1,UvrD-helicase,UvrD_C WXD2_k127_2841942_1 555088.DealDRAFT_0355 1.302e-127 444.0 COG3857@1|root,COG3857@2|Bacteria,1TS95@1239|Firmicutes,24F8M@186801|Clostridia 186801|Clostridia L PD-(D/E)XK nuclease superfamily - - 3.6.4.12 ko:K16899 - - - - ko00000,ko01000,ko03400 - - - PDDEXK_1 WXD2_k127_2861539_3 1254432.SCE1572_31265 1.777e-36 140.0 COG3607@1|root,COG3607@2|Bacteria,1RH1T@1224|Proteobacteria,42UQI@68525|delta/epsilon subdivisions,2WQII@28221|Deltaproteobacteria,2YVBZ@29|Myxococcales 28221|Deltaproteobacteria S Glyoxalase-like domain - - - ko:K07032 - - - - ko00000 - - - Glyoxalase WXD2_k127_2861539_1 404589.Anae109_4037 4.664e-139 448.0 COG1595@1|root,COG1595@2|Bacteria,1R96P@1224|Proteobacteria,437S0@68525|delta/epsilon subdivisions,2WYNG@28221|Deltaproteobacteria,2YTX1@29|Myxococcales 28221|Deltaproteobacteria K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2,SnoaL_2 WXD2_k127_2861539_2 1237149.C900_00974 2.697e-49 177.0 COG5646@1|root,COG5646@2|Bacteria,4NSDH@976|Bacteroidetes,47R0R@768503|Cytophagia 976|Bacteroidetes S Domain of unknown function (DU1801) - - - - - - - - - - - - DUF1801 WXD2_k127_2861539_0 1209984.BN978_06880 6.708e-167 535.0 COG2519@1|root,COG2519@2|Bacteria,2GMKZ@201174|Actinobacteria,23FCD@1762|Mycobacteriaceae 201174|Actinobacteria J Putative methyltransferase - - - - - - - - - - - - Methyltransf_31 WXD2_k127_2861539_4 1048339.KB913029_gene1160 2.173e-11 66.0 COG0500@1|root,COG2226@2|Bacteria,2GM2N@201174|Actinobacteria,4EVM3@85013|Frankiales 201174|Actinobacteria Q Pfam:Methyltransf_26 - - - - - - - - - - - - Methyltransf_25 WXD2_k127_287590_0 713586.KB900536_gene926 2.43e-315 983.0 COG0188@1|root,COG0188@2|Bacteria,1MURI@1224|Proteobacteria,1RMTC@1236|Gammaproteobacteria,1WWE3@135613|Chromatiales 135613|Chromatiales L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule parC - - ko:K02621 - - - - ko00000,ko01000,ko02048,ko03032,ko03036 - - - DNA_gyraseA_C,DNA_topoisoIV WXD2_k127_287590_2 215803.DB30_6358 1.136e-95 320.0 arCOG09511@1|root,2Z9DH@2|Bacteria,1MXRV@1224|Proteobacteria,42N0Y@68525|delta/epsilon subdivisions,2WK5S@28221|Deltaproteobacteria,2YY46@29|Myxococcales 28221|Deltaproteobacteria S FRG - - - - - - - - - - - - FRG WXD2_k127_287590_3 1382359.JIAL01000001_gene329 3.51e-92 311.0 COG0378@1|root,COG0378@2|Bacteria,3Y3AD@57723|Acidobacteria,2JJ75@204432|Acidobacteriia 204432|Acidobacteriia KO CobW/HypB/UreG, nucleotide-binding domain - - - ko:K04652 - - - - ko00000,ko03110 - - - cobW WXD2_k127_287590_7 401526.TcarDRAFT_1973 3.489e-16 82.0 COG0375@1|root,COG0375@2|Bacteria,1VEP0@1239|Firmicutes,4H581@909932|Negativicutes 909932|Negativicutes S Probably plays a role in a hydrogenase nickel cofactor insertion step hypA - - ko:K04651 - - - - ko00000,ko03110 - - - HypA WXD2_k127_287590_5 765869.BDW_02545 3.893e-40 161.0 COG2199@1|root,COG3706@2|Bacteria,1MZV7@1224|Proteobacteria,42SA7@68525|delta/epsilon subdivisions,2MSXB@213481|Bdellovibrionales,2WNRU@28221|Deltaproteobacteria 213481|Bdellovibrionales T GGDEF domain - - - - - - - - - - - - FHA,GGDEF,Yop-YscD_cpl WXD2_k127_287590_6 861299.J421_1787 1.561e-17 87.0 COG3474@1|root,COG3474@2|Bacteria 2|Bacteria C electron transfer activity - - 1.9.3.1 ko:K02275,ko:K02305,ko:K08738,ko:K17223 ko00190,ko00910,ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00190,map00910,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416 M00155,M00529,M00595 R00081,R00294,R10151 RC00016,RC02794,RC03151,RC03152 ko00000,ko00001,ko00002,ko01000 3.D.4.10,3.D.4.2,3.D.4.4,3.D.4.6 - - Cytochrom_C,Cytochrome_CBB3 WXD2_k127_287590_8 1122939.ATUD01000006_gene1641 7.944e-14 84.0 COG0745@1|root,COG0745@2|Bacteria,2GJE6@201174|Actinobacteria,4CPX6@84995|Rubrobacteria 84995|Rubrobacteria K COG COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms Transcription - - - - - - - - - - - - Response_reg,Trans_reg_C WXD2_k127_287590_1 1173024.KI912150_gene1500 4.584e-138 458.0 COG0492@1|root,COG3437@1|root,COG0492@2|Bacteria,COG3437@2|Bacteria,1FZX5@1117|Cyanobacteria,1JHD5@1189|Stigonemataceae 1117|Cyanobacteria KOT Pyridine nucleotide-disulphide oxidoreductase - - 1.8.1.9 ko:K00384 ko00450,map00450 - R02016,R03596,R09372 RC00013,RC02518,RC02873 ko00000,ko00001,ko01000 - - - Pyr_redox_2,Response_reg WXD2_k127_287590_4 390989.JOEG01000017_gene6236 5.419e-48 181.0 COG0428@1|root,COG0428@2|Bacteria,2GSYE@201174|Actinobacteria,4DDCM@85008|Micromonosporales 201174|Actinobacteria P ZIP Zinc transporter - - - ko:K07238 - - - - ko00000,ko02000 2.A.5.5 - - Zip WXD2_k127_287590_9 204669.Acid345_4245 5.121e-06 58.0 COG0457@1|root,COG0457@2|Bacteria,3Y85C@57723|Acidobacteria 57723|Acidobacteria S Tetratricopeptide repeat - - - - - - - - - - - - - WXD2_k127_2879882_1 1489678.RDMS_10325 6.964e-53 201.0 COG1131@1|root,COG1131@2|Bacteria,1WJ0H@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus V ABC-type multidrug transport system ATPase component - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran WXD2_k127_2879882_2 1071085.KK033114_gene1458 9.967e-13 76.0 COG1331@1|root,arCOG02007@2157|Archaea,2XT1C@28890|Euryarchaeota,23SUJ@183963|Halobacteria 183963|Halobacteria O COG1331 Highly conserved protein containing a thioredoxin domain - - - ko:K06888 - - - - ko00000 - - - Thioredox_DsbH WXD2_k127_2879882_0 204669.Acid345_1514 9.529e-89 305.0 COG1132@1|root,COG1132@2|Bacteria,3Y32T@57723|Acidobacteria,2JIBZ@204432|Acidobacteriia 204432|Acidobacteriia V ABC transporter, transmembrane - - - ko:K18889 ko02010,map02010 M00707 - - ko00000,ko00001,ko00002,ko02000 3.A.1.106.13,3.A.1.106.5 - - ABC_membrane,ABC_tran WXD2_k127_2880547_1 1121456.ATVA01000002_gene3214 7.061e-12 72.0 COG2703@1|root,COG2703@2|Bacteria,1N8CS@1224|Proteobacteria,42VDH@68525|delta/epsilon subdivisions,2X5TX@28221|Deltaproteobacteria,2MCV6@213115|Desulfovibrionales 28221|Deltaproteobacteria P PFAM Hemerythrin HHE cation binding domain protein - - - ko:K07216 - - - - ko00000 - - - Hemerythrin WXD2_k127_2880547_0 1463901.JOIY01000005_gene1865 1.424e-36 146.0 COG3593@1|root,COG3593@2|Bacteria,2GMN5@201174|Actinobacteria 201174|Actinobacteria L DNA synthesis involved in DNA repair - - - - - - - - - - - - - WXD2_k127_2885786_0 234267.Acid_7636 1.259e-174 582.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,3Y333@57723|Acidobacteria 57723|Acidobacteria KLTU Involved in the tonB-independent uptake of proteins - - - - - - - - - - - - PD40,Pkinase WXD2_k127_2885786_1 234267.Acid_5931 2.102e-72 252.0 COG0730@1|root,COG0730@2|Bacteria,3Y4IM@57723|Acidobacteria 57723|Acidobacteria S Sulfite exporter TauE/SafE - - - ko:K07090 - - - - ko00000 - - - TauE WXD2_k127_2901716_1 335543.Sfum_0065 3.018e-118 389.0 COG1220@1|root,COG1220@2|Bacteria,1MVK9@1224|Proteobacteria,42M48@68525|delta/epsilon subdivisions,2WISV@28221|Deltaproteobacteria,2MQ63@213462|Syntrophobacterales 28221|Deltaproteobacteria O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis hslU - - ko:K03667 - - - - ko00000,ko03110 - - - AAA_2,ClpB_D2-small WXD2_k127_2901716_0 65393.PCC7424_2737 2.368e-179 572.0 COG1012@1|root,COG1012@2|Bacteria,1G046@1117|Cyanobacteria,3KGZJ@43988|Cyanothece 1117|Cyanobacteria C aldehyde dehydrogenase gabD - 1.2.1.16,1.2.1.20,1.2.1.79 ko:K00135 ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120 M00027 R00713,R00714,R02401 RC00080 ko00000,ko00001,ko00002,ko01000 - - iECDH10B_1368.gabD,iJN678.gabD Aldedh WXD2_k127_2903324_3 1000565.METUNv1_01617 5.16e-36 142.0 COG3654@1|root,COG3654@2|Bacteria,1N1FW@1224|Proteobacteria,2VTKH@28216|Betaproteobacteria,2KZHD@206389|Rhodocyclales 206389|Rhodocyclales S Fic/DOC family - - - - - - - - - - - - Fic WXD2_k127_2903324_1 379066.GAU_0014 1.007e-149 490.0 COG2270@1|root,COG2270@2|Bacteria,1ZSZB@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Vacuole effluxer Atg22 like - - - ko:K06902 ko04138,map04138 - - - ko00000,ko00001,ko02000,ko04131 2.A.1.24,9.A.15.1 - - ATG22 WXD2_k127_2903324_2 1089547.KB913013_gene1062 6.835e-83 286.0 COG1520@1|root,COG1520@2|Bacteria,4NJ6Q@976|Bacteroidetes,47NVF@768503|Cytophagia 976|Bacteroidetes S Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - - - - - - - - - - - WXD2_k127_2903324_0 1254432.SCE1572_02095 9.703e-206 659.0 COG1226@1|root,COG1226@2|Bacteria,1MV0T@1224|Proteobacteria,43DUN@68525|delta/epsilon subdivisions,2WYXG@28221|Deltaproteobacteria,2Z0V5@29|Myxococcales 28221|Deltaproteobacteria P Castor and Pollux, part of voltage-gated ion channel - - - - - - - - - - - - Castor_Poll_mid WXD2_k127_29039_5 1278073.MYSTI_03292 2.494e-74 258.0 COG0600@1|root,COG0600@2|Bacteria,1MWDJ@1224|Proteobacteria,42RKW@68525|delta/epsilon subdivisions,2WNHG@28221|Deltaproteobacteria,2Z0P5@29|Myxococcales 28221|Deltaproteobacteria U Binding-protein-dependent transport system inner membrane component - - - ko:K02050 - M00188 - - ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 - - BPD_transp_1 WXD2_k127_29039_3 1382359.JIAL01000001_gene1326 5.372e-108 370.0 COG1116@1|root,COG1116@2|Bacteria,3Y4J1@57723|Acidobacteria,2JMUR@204432|Acidobacteriia 204432|Acidobacteriia P ABC transporter - - - ko:K02049 - M00188 - - ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 - - ABC_tran WXD2_k127_29039_4 1382359.JIAL01000001_gene1327 3.389e-77 277.0 COG0600@1|root,COG0600@2|Bacteria,3Y5KR@57723|Acidobacteria,2JNDD@204432|Acidobacteriia 204432|Acidobacteriia P Binding-protein-dependent transport system inner membrane component - - - ko:K02050 - M00188 - - ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 - - BPD_transp_1 WXD2_k127_29039_0 1382359.JIAL01000001_gene1328 1.016e-133 431.0 COG0715@1|root,COG0715@2|Bacteria,3Y5UN@57723|Acidobacteria,2JNY2@204432|Acidobacteriia 204432|Acidobacteriia P NMT1-like family - - - ko:K02051 - M00188 - - ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 - - NMT1_2 WXD2_k127_29039_8 234267.Acid_4815 2.201e-26 112.0 COG3682@1|root,COG3682@2|Bacteria,3Y8BB@57723|Acidobacteria 57723|Acidobacteria K Penicillinase repressor - - - - - - - - - - - - Penicillinase_R WXD2_k127_29039_7 861299.J421_1974 6.562e-35 153.0 COG3595@1|root,COG4219@1|root,COG3595@2|Bacteria,COG4219@2|Bacteria 2|Bacteria - - - - 3.4.16.4 ko:K01286 - - - - ko00000,ko01000 - - - DUF4097 WXD2_k127_29039_1 1120953.AUBH01000007_gene1812 3.8e-133 451.0 COG2091@1|root,COG2091@2|Bacteria,1MY8E@1224|Proteobacteria,1RQAI@1236|Gammaproteobacteria,469WE@72275|Alteromonadaceae 1236|Gammaproteobacteria H Carbohydrate family 9 binding domain-like - - - - - - - - - - - - CBM9_1 WXD2_k127_29039_6 861299.J421_3452 3.196e-49 185.0 COG0030@1|root,COG0030@2|Bacteria,1ZT2M@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits ksgA - 2.1.1.182 ko:K02528 - - R10716 RC00003,RC03257 ko00000,ko01000,ko03009 - - - RrnaAD WXD2_k127_29039_2 459349.CLOAM1410 9.105e-112 372.0 COG0714@1|root,COG0714@2|Bacteria,2NNMQ@2323|unclassified Bacteria 2|Bacteria S ATPase associated with various cellular moxR - - ko:K03924 - - - - ko00000,ko01000 - - - AAA_3 WXD2_k127_2925980_2 1217712.F971_01616 2.6e-55 203.0 COG0339@1|root,COG0339@2|Bacteria,1R4AJ@1224|Proteobacteria,1S0F2@1236|Gammaproteobacteria,3NKIW@468|Moraxellaceae 1236|Gammaproteobacteria E Peptidase family M3 - - 3.4.24.15 ko:K01392 ko04614,ko05143,map04614,map05143 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_M3 WXD2_k127_2925980_1 1118235.CAJH01000018_gene1024 6.765e-56 202.0 COG0739@1|root,COG0739@2|Bacteria,1RK7E@1224|Proteobacteria,1RYS2@1236|Gammaproteobacteria,1X698@135614|Xanthomonadales 135614|Xanthomonadales M Peptidase family M23 - - - ko:K21472 - - - - ko00000,ko01000,ko01002,ko01011 - - - Peptidase_M23 WXD2_k127_2925980_0 404589.Anae109_0505 1.555e-126 411.0 COG0266@1|root,COG0266@2|Bacteria,1MVHK@1224|Proteobacteria,43791@68525|delta/epsilon subdivisions,2X9X0@28221|Deltaproteobacteria,2YZTI@29|Myxococcales 28221|Deltaproteobacteria L Belongs to the FPG family - - 3.2.2.23,4.2.99.18 ko:K10563 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Fapy_DNA_glyco,H2TH,zf-FPG_IleRS WXD2_k127_2925980_3 861299.J421_0459 0.0002258 54.0 COG1502@1|root,COG1502@2|Bacteria,1ZTU6@142182|Gemmatimonadetes 2|Bacteria I Phospholipase D. Active site motifs. cls - - ko:K06131 ko00564,ko01100,map00564,map01100 - R07390 RC00017 ko00000,ko00001,ko01000 - - - PLDc_2 WXD2_k127_2931283_0 290397.Adeh_1905 1.742e-60 217.0 COG1403@1|root,COG1403@2|Bacteria,1MWEQ@1224|Proteobacteria,437B2@68525|delta/epsilon subdivisions,2X2FR@28221|Deltaproteobacteria,2Z0QW@29|Myxococcales 28221|Deltaproteobacteria L HNH endonuclease - - - - - - - - - - - - HNH_5 WXD2_k127_2931283_1 1246626.BleG1_1625 7.935e-59 222.0 COG1686@1|root,COG1686@2|Bacteria,1TQN0@1239|Firmicutes,4HBCE@91061|Bacilli,1ZB0W@1386|Bacillus 91061|Bacilli M Belongs to the peptidase S11 family dacF GO:0003674,GO:0003824,GO:0004175,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.16.4 ko:K07258 ko00550,ko01100,map00550,map01100 - - - ko00000,ko00001,ko01000,ko01002,ko01011 - - - PBP5_C,Peptidase_S11 WXD2_k127_2931283_2 1459636.NTE_02921 5.953e-12 66.0 COG0299@1|root,arCOG02825@2157|Archaea,41SH3@651137|Thaumarchaeota 651137|Thaumarchaeota F phosphoribosylglycinamide formyltransferase - - 2.1.2.2 ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 M00048 R04325,R04326 RC00026,RC00197,RC01128 ko00000,ko00001,ko00002,ko01000 - - - Formyl_trans_N WXD2_k127_2936247_0 760117.JN27_18540 0.0 1137.0 COG0612@1|root,COG0612@2|Bacteria,1MVST@1224|Proteobacteria,2VHVB@28216|Betaproteobacteria,476SF@75682|Oxalobacteraceae 28216|Betaproteobacteria S Insulinase (Peptidase family M16) - - - - - - - - - - - - Peptidase_M16,Peptidase_M16_C WXD2_k127_2936247_2 1329516.JPST01000021_gene2434 1.61e-05 53.0 COG4994@1|root,COG4994@2|Bacteria,1VC72@1239|Firmicutes,4HMHY@91061|Bacilli 91061|Bacilli S Protein conserved in bacteria - - - - - - - - - - - - DUF4440 WXD2_k127_2936247_1 1254432.SCE1572_08535 4.472e-70 239.0 COG3256@1|root,COG3256@2|Bacteria,1MVT1@1224|Proteobacteria,42NBM@68525|delta/epsilon subdivisions,2WKTG@28221|Deltaproteobacteria,2YY1N@29|Myxococcales 28221|Deltaproteobacteria P Cytochrome C and Quinol oxidase polypeptide I - - 1.7.2.5 ko:K04561 ko00910,ko01120,map00910,map01120 M00529 R00294 RC02794 ko00000,ko00001,ko00002,ko01000 3.D.4.10 - - COX1 WXD2_k127_2947084_1 243231.GSU1332 1.592e-206 655.0 COG3696@1|root,COG3696@2|Bacteria,1NUIV@1224|Proteobacteria,42NCZ@68525|delta/epsilon subdivisions,2WK3X@28221|Deltaproteobacteria 28221|Deltaproteobacteria P Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - ko:K07787 ko02020,map02020 - - - ko00000,ko00001,ko02000 2.A.6.1.4 - iAF987.Gmet_1547 ACR_tran WXD2_k127_2947084_2 404380.Gbem_2165 1.089e-98 354.0 COG0845@1|root,COG0845@2|Bacteria,1MVAS@1224|Proteobacteria,42PKU@68525|delta/epsilon subdivisions,2WM5K@28221|Deltaproteobacteria 28221|Deltaproteobacteria M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K07798,ko:K15727 ko02020,map02020 - - - ko00000,ko00001,ko02000 2.A.6.1.4,8.A.1,8.A.1.2.1 - - DUF3347,HlyD_D23 WXD2_k127_2947084_4 32042.PstZobell_02416 8.444e-23 112.0 COG1538@1|root,COG1538@2|Bacteria,1PCPQ@1224|Proteobacteria,1RRRP@1236|Gammaproteobacteria,1Z0GS@136846|Pseudomonas stutzeri group 1236|Gammaproteobacteria MU COG1538 Outer membrane protein cebC - - - - - - - - - - - OEP WXD2_k127_2947084_3 204669.Acid345_1498 2.847e-83 284.0 COG0664@1|root,COG0664@2|Bacteria,3Y4IX@57723|Acidobacteria,2JJ9U@204432|Acidobacteriia 204432|Acidobacteriia K cyclic nucleotide-binding - - - ko:K01420,ko:K10914 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 - - - ko00000,ko00001,ko03000 - - - HTH_Crp_2,cNMP_binding WXD2_k127_2947084_5 1064537.AGSO01000010_gene2568 2.093e-05 53.0 COG1385@1|root,COG1385@2|Bacteria,2GTKX@201174|Actinobacteria,4FBRG@85020|Dermabacteraceae 201174|Actinobacteria J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit rsmE GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070042,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.193 ko:K09761 - - - - ko00000,ko01000,ko03009 - - - Methyltrans_RNA WXD2_k127_2947084_0 118163.Ple7327_2008 2.304e-301 941.0 COG0674@1|root,COG1013@1|root,COG1014@1|root,COG1145@1|root,COG0674@2|Bacteria,COG1013@2|Bacteria,COG1014@2|Bacteria,COG1145@2|Bacteria,1G2E2@1117|Cyanobacteria,3VJDV@52604|Pleurocapsales 1117|Cyanobacteria C Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin nifJ GO:0003674,GO:0003824,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016491,GO:0050896,GO:0055114 1.2.7.1 ko:K03737 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00173,M00307 R01196,R10866 RC00004,RC02742 br01601,ko00000,ko00001,ko00002,ko01000 - - iJN678.nifJ EKR,Fer4_16,PFOR_II,POR,POR_N,TPP_enzyme_C WXD2_k127_2961561_8 1304888.ATWF01000001_gene682 1.498e-14 77.0 COG1493@1|root,COG1493@2|Bacteria,2GF33@200930|Deferribacteres 200930|Deferribacteres H Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) hprK - - ko:K06023 - - - - ko00000,ko01000 - - - Hpr_kinase_C,Hpr_kinase_N WXD2_k127_2961561_2 926566.Terro_2758 1.175e-72 259.0 COG1660@1|root,COG1660@2|Bacteria,3Y2HM@57723|Acidobacteria,2JHJM@204432|Acidobacteriia 204432|Acidobacteriia S Displays ATPase and GTPase activities - - - ko:K06958 - - - - ko00000,ko03019 - - - ATP_bind_2 WXD2_k127_2961561_5 1047013.AQSP01000135_gene1606 7.96e-26 120.0 COG2893@1|root,COG2893@2|Bacteria,2NRCX@2323|unclassified Bacteria 2|Bacteria G PTS system fructose IIA component manX - 2.7.1.191,2.7.1.194 ko:K02793,ko:K02794,ko:K02821 ko00051,ko00053,ko00520,ko01100,ko01120,ko02060,map00051,map00053,map00520,map01100,map01120,map02060 M00276,M00283,M00550 R02630,R07671 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.6.1,4.A.7.1 - - EIIA-man WXD2_k127_2961561_6 1123257.AUFV01000005_gene1375 5.655e-21 100.0 COG1925@1|root,COG1925@2|Bacteria,1N6RM@1224|Proteobacteria,1SCXX@1236|Gammaproteobacteria,1X7PU@135614|Xanthomonadales 135614|Xanthomonadales G phosphocarrier protein HPr ptsH - - ko:K11189 - - - - ko00000,ko02000 4.A.2.1 - - PTS-HPr WXD2_k127_2961561_0 887929.HMP0721_2000 4.658e-151 497.0 COG1080@1|root,COG1080@2|Bacteria,1TPK8@1239|Firmicutes,248QP@186801|Clostridia,25UYQ@186806|Eubacteriaceae 186801|Clostridia G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) ptsP - 2.7.3.9,2.7.9.2 ko:K01007,ko:K08483 ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,ko02060,map00620,map00680,map00720,map01100,map01120,map01200,map02060 M00173,M00374 R00199 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000,ko02000 8.A.7 - - PEP-utilisers_N,PEP-utilizers,PEP-utilizers_C WXD2_k127_2961561_4 1379270.AUXF01000003_gene3432 2.228e-31 142.0 COG0662@1|root,COG0662@2|Bacteria,1ZTKY@142182|Gemmatimonadetes 142182|Gemmatimonadetes G Mannose-6-phosphate isomerase - - - - - - - - - - - - Cupin_2 WXD2_k127_2961561_1 86416.Clopa_2664 2.662e-112 380.0 COG0621@1|root,COG0621@2|Bacteria,1TNYN@1239|Firmicutes,2482Y@186801|Clostridia,36DJV@31979|Clostridiaceae 186801|Clostridia J Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine miaB - 2.8.4.3 ko:K06168 - - R10645,R10646,R10647 RC00003,RC00980,RC03221,RC03222 ko00000,ko01000,ko03016 - - - Radical_SAM,TRAM,UPF0004 WXD2_k127_2961561_3 671143.DAMO_1375 5.189e-50 185.0 COG1259@1|root,COG1259@2|Bacteria,2NP7X@2323|unclassified Bacteria 2|Bacteria S Bifunctional nuclease - GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - ko:K03617,ko:K08999 - - - - ko00000 - - - DNase-RNase,UVR WXD2_k127_2961561_7 511051.CSE_15680 1.074e-19 91.0 COG1192@1|root,COG1192@2|Bacteria 2|Bacteria D plasmid maintenance parA - - ko:K03496 - - - - ko00000,ko03036,ko04812 - - - AAA_31 WXD2_k127_2962695_4 1165096.ARWF01000001_gene2279 4.91e-15 79.0 COG0672@1|root,COG0672@2|Bacteria 2|Bacteria P high-affinity ferrous iron transmembrane transporter activity - - - ko:K07243 - - - - ko00000,ko02000 2.A.108.1,2.A.108.2 - - DUF2318,FTR1 WXD2_k127_2962695_6 472759.Nhal_1730 2.57e-06 50.0 COG4256@1|root,COG4256@2|Bacteria,1NGJH@1224|Proteobacteria 1224|Proteobacteria P Hemin uptake protein hmuP - - - - - - - - - - - hemP WXD2_k127_2962695_0 398579.Spea_2275 7.046e-88 301.0 COG3291@1|root,COG3291@2|Bacteria,1QC1P@1224|Proteobacteria,1T7PF@1236|Gammaproteobacteria,2QDB3@267890|Shewanellaceae 1236|Gammaproteobacteria S Pkd domain containing protein - - - - - - - - - - - - - WXD2_k127_2962695_1 1500894.JQNN01000001_gene901 2.696e-76 270.0 COG1408@1|root,COG1408@2|Bacteria,1MUH5@1224|Proteobacteria,2VH7E@28216|Betaproteobacteria,473GY@75682|Oxalobacteraceae 28216|Betaproteobacteria S Calcineurin-like phosphoesterase - - - ko:K07098 - - - - ko00000 - - - Metallophos WXD2_k127_2962695_5 744872.Spica_1045 2.183e-14 82.0 COG1762@1|root,COG3311@1|root,COG1762@2|Bacteria,COG3311@2|Bacteria,2J5KE@203691|Spirochaetes 203691|Spirochaetes G DNA-binding protein PTS system, IIA component - - - ko:K02806 ko02060,map02060 - - - ko00000,ko00001,ko01000,ko02000 - - - HTH_17,PTS_EIIA_2 WXD2_k127_2962695_3 316067.Geob_1705 7.98e-53 199.0 COG1762@1|root,COG1762@2|Bacteria,1RG0Z@1224|Proteobacteria,42RSF@68525|delta/epsilon subdivisions,2WNXB@28221|Deltaproteobacteria 28221|Deltaproteobacteria G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 - - - ko:K02806 ko02060,map02060 - - - ko00000,ko00001,ko01000,ko02000 - - - HTH_17,PTS_EIIA_2 WXD2_k127_2962695_2 1121918.ARWE01000001_gene399 5.182e-59 216.0 COG0651@1|root,COG0651@2|Bacteria,1MXRW@1224|Proteobacteria,42NFV@68525|delta/epsilon subdivisions,2WJZ0@28221|Deltaproteobacteria,43T2H@69541|Desulfuromonadales 28221|Deltaproteobacteria C PFAM NADH Ubiquinone plastoquinone (complex I) ehrA-2 - - ko:K12137 - - - - ko00000,ko01000 - - - Proton_antipo_M,Proton_antipo_N WXD2_k127_2996918_2 1094980.Mpsy_1252 5.391e-15 86.0 COG0784@1|root,arCOG02594@2157|Archaea,2Y7NN@28890|Euryarchaeota,2NB1R@224756|Methanomicrobia 224756|Methanomicrobia T cheY-homologous receiver domain - - - ko:K07658 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_24,Response_reg WXD2_k127_2996918_1 1185876.BN8_05964 1.184e-50 183.0 COG0454@1|root,COG0456@2|Bacteria,4NQDY@976|Bacteroidetes,47QNQ@768503|Cytophagia 976|Bacteroidetes K Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_1,Acetyltransf_10,Acetyltransf_7 WXD2_k127_2996918_0 312284.A20C1_03776 4.495e-209 659.0 COG0076@1|root,COG0076@2|Bacteria,2GK3J@201174|Actinobacteria 201174|Actinobacteria E decarboxylase - - 4.1.1.105,4.1.1.28 ko:K01593 ko00350,ko00360,ko00380,ko00901,ko00950,ko00965,ko01100,ko01110,ko04726,ko04728,ko05030,ko05031,ko05034,map00350,map00360,map00380,map00901,map00950,map00965,map01100,map01110,map04726,map04728,map05030,map05031,map05034 M00037,M00042 R00685,R00699,R00736,R02080,R02701,R04909 RC00299 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Pyridoxal_deC WXD2_k127_3003211_2 1455608.JDTH01000006_gene2500 6.654e-76 274.0 COG2124@1|root,arCOG02814@2157|Archaea,2XTFX@28890|Euryarchaeota,23S5X@183963|Halobacteria 183963|Halobacteria Q Cytochrome P450 - - - - - - - - - - - - p450 WXD2_k127_3003211_0 227882.SAV_849 1.948e-133 444.0 COG1032@1|root,COG1032@2|Bacteria 2|Bacteria C radical SAM domain protein - - - ko:K20444 - - - - ko00000,ko01000,ko01005,ko02000 4.D.1.3 GT2,GT4 - B12-binding,Radical_SAM WXD2_k127_3003211_1 46234.ANA_C13064 2.822e-100 338.0 COG1819@1|root,COG1819@2|Bacteria,1GJA7@1117|Cyanobacteria,1HR9N@1161|Nostocales 1117|Cyanobacteria CG UDP-glucoronosyl and UDP-glucosyl transferase - - - - - - - - - - - - UDPGT WXD2_k127_301208_0 204669.Acid345_4237 4.746e-134 435.0 COG1740@1|root,COG1740@2|Bacteria,3Y3HS@57723|Acidobacteria,2JJYD@204432|Acidobacteriia 204432|Acidobacteriia C NiFe/NiFeSe hydrogenase small subunit C-terminal - - 1.12.99.6 ko:K06282 ko00633,ko01120,map00633,map01120 - R08034 RC00250 ko00000,ko00001,ko01000 - - - NiFe_hyd_SSU_C,Oxidored_q6 WXD2_k127_301208_3 1121015.N789_08765 2.782e-42 161.0 COG4339@1|root,COG4339@2|Bacteria,1QV5J@1224|Proteobacteria,1T5PZ@1236|Gammaproteobacteria,1X6K0@135614|Xanthomonadales 135614|Xanthomonadales S protein conserved in bacteria - - - - - - - - - - - - - WXD2_k127_301208_1 204669.Acid345_4616 6.701e-98 327.0 COG2321@1|root,COG2321@2|Bacteria,3Y3WQ@57723|Acidobacteria,2JIYI@204432|Acidobacteriia 204432|Acidobacteriia S Putative neutral zinc metallopeptidase - - - ko:K07054 - - - - ko00000 - - - Zn_peptidase WXD2_k127_301208_2 56107.Cylst_0633 4.717e-76 265.0 COG2304@1|root,COG2304@2|Bacteria,1G3PE@1117|Cyanobacteria,1HKB6@1161|Nostocales 1117|Cyanobacteria S protein containing a von Willebrand factor type A (vWA) domain - - - ko:K07114 - - - - ko00000,ko02000 1.A.13.2.2,1.A.13.2.3 - - DUF3520,VWA,vWF_A WXD2_k127_3013469_3 1123400.KB904791_gene61 6.103e-25 106.0 COG0236@1|root,COG0236@2|Bacteria,1MZ4P@1224|Proteobacteria 1224|Proteobacteria IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis acpP GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0050896,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - ko:K02078 - - - - ko00000,ko00001 - - - PP-binding WXD2_k127_3013469_4 264462.Bd3838 9.89e-19 89.0 COG4911@1|root,COG4911@2|Bacteria,1NPJ8@1224|Proteobacteria,437MG@68525|delta/epsilon subdivisions,2MU4P@213481|Bdellovibrionales,2X2VN@28221|Deltaproteobacteria 213481|Bdellovibrionales S Uncharacterized conserved protein (DUF2203) - - - - - - - - - - - - DUF2203 WXD2_k127_3013469_2 351160.RCIX925 5.263e-26 118.0 COG1011@1|root,arCOG02291@2157|Archaea 2157|Archaea S hydrolase (HAD superfamily) - - - ko:K07025 - - - - ko00000 - - - HAD_2 WXD2_k127_3013469_1 756272.Plabr_1384 1.958e-50 190.0 COG1234@1|root,COG1234@2|Bacteria,2IWSW@203682|Planctomycetes 203682|Planctomycetes S of the beta-lactamase - - 3.1.26.11 ko:K00784 ko03013,map03013 - - - ko00000,ko00001,ko01000,ko03016 - - - Lactamase_B_2 WXD2_k127_3013469_0 518766.Rmar_1876 9.839e-51 197.0 COG2027@1|root,COG2027@2|Bacteria,4NGIQ@976|Bacteroidetes,1FIVK@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes M D-Ala-D-Ala carboxypeptidase 3 (S13) family - - 3.4.16.4 ko:K07259 ko00550,map00550 - - - ko00000,ko00001,ko01000,ko01002,ko01011 - - - Peptidase_S13 WXD2_k127_3018439_2 1550073.JROH01000058_gene3224 2.415e-68 244.0 COG0612@1|root,COG0612@2|Bacteria,1MVST@1224|Proteobacteria,2TRFB@28211|Alphaproteobacteria,2K2A4@204457|Sphingomonadales 204457|Sphingomonadales S Peptidase, M16 - - - ko:K07263 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M16,Peptidase_M16_C WXD2_k127_3018439_0 1234364.AMSF01000025_gene3728 4.168e-149 485.0 COG0612@1|root,COG0612@2|Bacteria,1MVST@1224|Proteobacteria,1RN05@1236|Gammaproteobacteria,1X5E6@135614|Xanthomonadales 135614|Xanthomonadales S Insulinase (Peptidase family M16) - - - ko:K07263 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M16,Peptidase_M16_C WXD2_k127_3018439_3 1122609.AUGT01000008_gene2868 3.276e-07 64.0 COG0366@1|root,COG0515@1|root,COG2133@1|root,COG3227@1|root,COG4733@1|root,COG0366@2|Bacteria,COG0515@2|Bacteria,COG2133@2|Bacteria,COG3227@2|Bacteria,COG4733@2|Bacteria 2|Bacteria S cellulase activity - - 3.2.1.3 ko:K01178,ko:K14645,ko:K18546 ko00500,ko01100,ko02024,map00500,map01100,map02024 - R01790,R01791,R06199 - ko00000,ko00001,ko01000,ko01002,ko03110 - GH15 - Alpha-amylase,GSDH,He_PIG,PKD,Pro_Al_protease,SLH,Trypsin,fn3 WXD2_k127_3018439_1 234267.Acid_0626 7.958e-116 413.0 COG1470@1|root,COG2373@1|root,COG2931@1|root,COG3391@1|root,COG4886@1|root,COG5492@1|root,COG1470@2|Bacteria,COG2373@2|Bacteria,COG2931@2|Bacteria,COG3391@2|Bacteria,COG4886@2|Bacteria,COG5492@2|Bacteria,3Y49I@57723|Acidobacteria 57723|Acidobacteria N Bacterial Ig-like domain (group 3) - - - - - - - - - - - - Big_3_5,VCBS WXD2_k127_3052605_2 1173026.Glo7428_2420 2.652e-123 420.0 COG3614@1|root,COG5002@1|root,COG3614@2|Bacteria,COG5002@2|Bacteria,1GHEK@1117|Cyanobacteria 1117|Cyanobacteria T Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - - - - - - - - - - HATPase_c,HisKA WXD2_k127_3052605_3 330214.NIDE3615 3.218e-103 349.0 COG2081@1|root,COG2081@2|Bacteria,3J12U@40117|Nitrospirae 40117|Nitrospirae S HI0933-like protein - - - ko:K07007 - - - - ko00000 - - - HI0933_like WXD2_k127_3052605_0 1047013.AQSP01000125_gene2627 2.731e-245 782.0 COG2120@1|root,COG2120@2|Bacteria 2|Bacteria S N-acetylglucosaminylinositol deacetylase activity mca - - ko:K22136 - - - - ko00000 - - - NPCBM_assoc,PIG-L WXD2_k127_3052605_1 1358423.N180_10595 9.818e-179 578.0 COG0591@1|root,COG0591@2|Bacteria,4NEN8@976|Bacteroidetes,1INRR@117747|Sphingobacteriia 976|Bacteroidetes E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family yidK - - - - - - - - - - - SSF WXD2_k127_3052605_6 880071.Fleli_2733 1.32e-53 199.0 COG0457@1|root,COG0457@2|Bacteria,4P246@976|Bacteroidetes,47PGN@768503|Cytophagia 976|Bacteroidetes S Protein of unknown function (DUF2911) - - - - - - - - - - - - DUF2911 WXD2_k127_3052605_5 479434.Sthe_1762 7.689e-54 212.0 COG1971@1|root,COG1971@2|Bacteria,2G8IE@200795|Chloroflexi,27YSN@189775|Thermomicrobia 189775|Thermomicrobia P Probably functions as a manganese efflux pump - - - - - - - - - - - - - WXD2_k127_3052605_4 204669.Acid345_1827 1.909e-68 239.0 COG1040@1|root,COG1040@2|Bacteria 2|Bacteria K competence protein ComFC - - - - - - - - - - - DZR,Pribosyltran,zinc_ribbon_2 WXD2_k127_3053396_3 1242864.D187_003993 2.669e-06 56.0 2ESNI@1|root,33K73@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - DUF2378 WXD2_k127_3053396_0 935567.JAES01000028_gene2711 4.718e-149 508.0 COG2199@1|root,COG3292@1|root,COG3292@2|Bacteria,COG3706@2|Bacteria,1R7HC@1224|Proteobacteria,1RQCR@1236|Gammaproteobacteria,1X4SZ@135614|Xanthomonadales 135614|Xanthomonadales T diguanylate cyclase - - - - - - - - - - - - GGDEF,Reg_prop,Y_Y_Y WXD2_k127_3053396_1 1128421.JAGA01000002_gene1330 2.347e-72 261.0 COG2311@1|root,COG2311@2|Bacteria 2|Bacteria S Protein of unknown function (DUF418) - - - ko:K07148 - - - - ko00000 - - - DUF418 WXD2_k127_3053396_2 935567.JAES01000028_gene2711 1.592e-62 226.0 COG2199@1|root,COG3292@1|root,COG3292@2|Bacteria,COG3706@2|Bacteria,1R7HC@1224|Proteobacteria,1RQCR@1236|Gammaproteobacteria,1X4SZ@135614|Xanthomonadales 135614|Xanthomonadales T diguanylate cyclase - - - - - - - - - - - - GGDEF,Reg_prop,Y_Y_Y WXD2_k127_3064345_7 1267535.KB906767_gene4618 1.244e-44 170.0 COG0558@1|root,COG0558@2|Bacteria,3Y520@57723|Acidobacteria,2JP32@204432|Acidobacteriia 204432|Acidobacteriia I CDP-alcohol phosphatidyltransferase - - 2.7.8.5 ko:K00995 ko00564,ko01100,map00564,map01100 - R01801 RC00002,RC00017,RC02795 ko00000,ko00001,ko01000 - - - CDP-OH_P_transf WXD2_k127_3064345_5 1267535.KB906767_gene4492 3.073e-63 239.0 COG0313@1|root,COG0313@2|Bacteria,3Y32N@57723|Acidobacteria,2JIGR@204432|Acidobacteriia 204432|Acidobacteriia H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA rsmI - 2.1.1.198 ko:K07056 - - - - ko00000,ko01000,ko03009 - - - TP_methylase WXD2_k127_3064345_10 1297617.JPJD01000023_gene1570 1.797e-32 139.0 COG0566@1|root,COG0566@2|Bacteria,1V3JP@1239|Firmicutes,248DV@186801|Clostridia,268GU@186813|unclassified Clostridiales 186801|Clostridia J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family spoU - - ko:K03437 - - - - ko00000,ko03016 - - - SpoU_methylase,SpoU_sub_bind WXD2_k127_3064345_1 648996.Theam_0678 1.074e-104 353.0 COG0436@1|root,COG0436@2|Bacteria,2G3VY@200783|Aquificae 200783|Aquificae E PFAM Aminotransferase class I and II - - 2.6.1.1 ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 - R00355,R00694,R00734,R00896,R02433,R02619,R05052 RC00006 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 WXD2_k127_3064345_8 234267.Acid_1212 2.718e-37 156.0 COG0760@1|root,COG0760@2|Bacteria 2|Bacteria O peptidyl-prolyl cis-trans isomerase activity - - 5.2.1.8 ko:K03769,ko:K03770,ko:K03771 - - - - ko00000,ko01000,ko03110 - - - Rotamase,Rotamase_2,Rotamase_3,SurA_N_3 WXD2_k127_3064345_2 1047013.AQSP01000099_gene1495 9.135e-71 247.0 COG0805@1|root,COG0805@2|Bacteria,2NPGB@2323|unclassified Bacteria 2|Bacteria U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes tatC GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0022804,GO:0022857,GO:0022884,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0040007,GO:0042886,GO:0042887,GO:0043953,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - ko:K03118 ko03060,ko03070,map03060,map03070 M00336 - - ko00000,ko00001,ko00002,ko02044 2.A.64 - - TatC WXD2_k127_3064345_13 1047013.AQSP01000099_gene1496 3.007e-14 78.0 COG1826@1|root,COG1826@2|Bacteria,2NQ3N@2323|unclassified Bacteria 2|Bacteria U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system tatA - - ko:K03116,ko:K03117,ko:K03646 ko03060,ko03070,map03060,map03070 M00336 - - ko00000,ko00001,ko00002,ko02000,ko02044 2.A.64,2.C.1.2 - - MttA_Hcf106 WXD2_k127_3064345_0 204669.Acid345_2676 7.924e-115 390.0 COG0793@1|root,COG0793@2|Bacteria,3Y3KP@57723|Acidobacteria,2JHNE@204432|Acidobacteriia 204432|Acidobacteriia M Belongs to the peptidase S41A family - - 3.4.21.102 ko:K03797 - - - - ko00000,ko01000,ko01002 - - - PDZ_2,Peptidase_S41 WXD2_k127_3064345_14 215803.DB30_2245 6.261e-12 73.0 28S5K@1|root,2ZEH5@2|Bacteria,1PW2U@1224|Proteobacteria,434UQ@68525|delta/epsilon subdivisions,2WZ5T@28221|Deltaproteobacteria,2Z1DY@29|Myxococcales 28221|Deltaproteobacteria S Protein of unknown function (FYDLN_acid) - - - - - - - - - - - - FYDLN_acid WXD2_k127_3064345_4 1191523.MROS_0414 1.064e-63 225.0 COG1704@1|root,COG1704@2|Bacteria 2|Bacteria S LemA family lemA - - ko:K03744 - - - - ko00000 - - - LemA WXD2_k127_3064345_6 1125863.JAFN01000001_gene284 1.29e-46 178.0 COG1512@1|root,COG1512@2|Bacteria,1PB41@1224|Proteobacteria,42R0Q@68525|delta/epsilon subdivisions,2WN87@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Beta-propeller domains of methanol dehydrogenase type - - - ko:K06872 - - - - ko00000 - - - TPM_phosphatase WXD2_k127_3064345_11 1519464.HY22_13515 5.049e-30 134.0 COG3762@1|root,COG3762@2|Bacteria 2|Bacteria S Membrane Z012_08985 - - ko:K08988 - - - - ko00000 - - - TPM_phosphatase WXD2_k127_3064345_12 1120950.KB892801_gene1722 1.082e-23 108.0 COG0801@1|root,COG0801@2|Bacteria,2H3G6@201174|Actinobacteria,4DQ88@85009|Propionibacteriales 201174|Actinobacteria H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) folK - 2.7.6.3,4.1.2.25 ko:K00950,ko:K13940 ko00790,ko01100,map00790,map01100 M00126,M00841 R03503,R03504 RC00002,RC00017,RC00721,RC00943 ko00000,ko00001,ko00002,ko01000 - - - FolB,HPPK WXD2_k127_3064345_3 626887.J057_01524 4.621e-67 233.0 COG0288@1|root,COG0288@2|Bacteria,1NGFN@1224|Proteobacteria,1RSY6@1236|Gammaproteobacteria,466D6@72275|Alteromonadaceae 1236|Gammaproteobacteria P Reversible hydration of carbon dioxide can GO:0003674,GO:0003824,GO:0004089,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008270,GO:0015976,GO:0016829,GO:0016835,GO:0016836,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914 4.2.1.1 ko:K01673 ko00910,map00910 - R00132,R10092 RC02807 ko00000,ko00001,ko01000 - - iSBO_1134.SBO_0115,iSbBS512_1146.SbBS512_E0119 Pro_CA WXD2_k127_3064345_9 760117.JN27_08410 3.603e-33 140.0 COG0739@1|root,COG0739@2|Bacteria,1RK0U@1224|Proteobacteria,2VUK1@28216|Betaproteobacteria 28216|Betaproteobacteria M Peptidase family M23 - - - ko:K21472 - - - - ko00000,ko01000,ko01002,ko01011 - - - Peptidase_M23 WXD2_k127_3066455_0 1382359.JIAL01000001_gene416 1.186e-259 816.0 COG0465@1|root,COG0465@2|Bacteria,3Y2UK@57723|Acidobacteria,2JI9D@204432|Acidobacteriia 204432|Acidobacteriia O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins ftsH - - ko:K03798 - M00742 - - ko00000,ko00002,ko01000,ko01002,ko03110 - - - AAA,FtsH_ext,Peptidase_M41 WXD2_k127_3066455_2 883156.HMPREF9282_01495 6.522e-26 115.0 COG0634@1|root,COG0634@2|Bacteria,1V1C9@1239|Firmicutes,4H4H3@909932|Negativicutes 909932|Negativicutes F Belongs to the purine pyrimidine phosphoribosyltransferase family hpt - 2.4.2.8 ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 - R00190,R01132,R01229,R02142,R08237,R08238,R08245 RC00063,RC00122 ko00000,ko00001,ko01000 - - - Pribosyltran WXD2_k127_3066455_1 264732.Moth_0104 1.923e-50 201.0 COG0037@1|root,COG0037@2|Bacteria,1TPXP@1239|Firmicutes,248TY@186801|Clostridia,42F58@68295|Thermoanaerobacterales 186801|Clostridia D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine tilS - 6.3.4.19 ko:K04075 - - R09597 RC02633,RC02634 ko00000,ko01000,ko03016 - - - ATP_bind_3,TilS,TilS_C WXD2_k127_3066455_3 1499967.BAYZ01000075_gene2072 7.718e-10 72.0 COG2165@1|root,COG2165@2|Bacteria,2NQ2Y@2323|unclassified Bacteria 2|Bacteria NU Prokaryotic N-terminal methylation motif pulG - - ko:K02456 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - N_methyl,T2SSG WXD2_k127_307469_3 518766.Rmar_0629 9.434e-89 301.0 COG0823@1|root,COG4775@1|root,COG0823@2|Bacteria,COG4775@2|Bacteria,4NERT@976|Bacteroidetes,1FJ3R@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes MU WD40-like Beta Propeller Repeat - - - - - - - - - - - - BSP,Bac_surface_Ag,PD40 WXD2_k127_307469_4 1459636.NTE_00013 3.483e-68 237.0 COG2085@1|root,arCOG00457@2157|Archaea 2157|Archaea S NADPH-dependent F420 reductase - - 1.5.1.40 ko:K06988 - - - - ko00000,ko01000 - - - F420_oxidored,HTH_10 WXD2_k127_307469_1 861299.J421_1210 9.528e-115 382.0 28JRE@1|root,2Z9H3@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_307469_2 861299.J421_1211 2.915e-89 321.0 2CAE5@1|root,313QD@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_307469_5 1267534.KB906760_gene1343 6.124e-58 225.0 COG0457@1|root,COG3710@1|root,COG5616@1|root,COG0457@2|Bacteria,COG3710@2|Bacteria,COG5616@2|Bacteria,3Y2HR@57723|Acidobacteria,2JI02@204432|Acidobacteriia 204432|Acidobacteriia KLT Tetratricopeptide repeats - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase,TPR_16,TPR_2,Trans_reg_C WXD2_k127_307469_0 710421.Mycch_3320 4.257e-142 460.0 COG3320@1|root,COG3320@2|Bacteria,2GKZY@201174|Actinobacteria,236ZW@1762|Mycobacteriaceae 201174|Actinobacteria Q Male sterility protein acrA1_1 - - - - - - - - - - - NAD_binding_4 WXD2_k127_307469_6 40571.JOEA01000014_gene1881 8.127e-24 109.0 COG1898@1|root,COG1898@2|Bacteria,2HA8V@201174|Actinobacteria 201174|Actinobacteria M dTDP-4-dehydrorhamnose 3,5-epimerase activity - - - - - - - - - - - - - WXD2_k127_3075206_5 1304872.JAGC01000009_gene915 1.947e-93 318.0 COG1089@1|root,COG1089@2|Bacteria,1Q6NV@1224|Proteobacteria,42M5B@68525|delta/epsilon subdivisions,2WM08@28221|Deltaproteobacteria,2MAQ0@213115|Desulfovibrionales 28221|Deltaproteobacteria M Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose - - 4.2.1.47 ko:K01711 ko00051,ko00520,ko01100,map00051,map00520,map01100 - R00888 RC00402 ko00000,ko00001,ko01000 - - - GDP_Man_Dehyd WXD2_k127_3075206_6 1380394.JADL01000003_gene5179 1.68e-84 288.0 COG0703@1|root,COG1396@1|root,COG0703@2|Bacteria,COG1396@2|Bacteria,1MX66@1224|Proteobacteria,2TQWU@28211|Alphaproteobacteria,2JSJ6@204441|Rhodospirillales 204441|Rhodospirillales EK Shikimate kinase - - - - - - - - - - - - HTH_31,SKI WXD2_k127_3075206_0 1380394.JADL01000003_gene5165 3.717e-243 761.0 COG1024@1|root,COG1024@2|Bacteria,1N817@1224|Proteobacteria,2TQTE@28211|Alphaproteobacteria 28211|Alphaproteobacteria I enoyl-CoA hydratase boxC - 4.1.2.44 ko:K15513 ko00362,map00362 - R09556 RC03426 ko00000,ko00001,ko01000 - - - ECH_1 WXD2_k127_3075206_1 1380394.JADL01000003_gene5164 4.028e-236 764.0 COG3396@1|root,COG3396@2|Bacteria,1MXUK@1224|Proteobacteria,2TTIG@28211|Alphaproteobacteria 28211|Alphaproteobacteria S benzoyl-CoA oxygenase boxB - 1.14.13.208 ko:K15512 ko00362,map00362 - R09555 RC01739 ko00000,ko00001,ko01000 - - - - WXD2_k127_3075206_3 1487953.JMKF01000037_gene3221 8.177e-159 524.0 COG0642@1|root,COG2205@2|Bacteria,1G4NX@1117|Cyanobacteria 1117|Cyanobacteria T Domain of unknown function (DUF4118) - - - - - - - - - - - - DUF4118,HATPase_c,HisKA,PAS_9,Response_reg WXD2_k127_3075206_2 935863.AWZR01000003_gene2764 4.496e-208 655.0 COG2723@1|root,COG2723@2|Bacteria,1MWG6@1224|Proteobacteria,1RMM2@1236|Gammaproteobacteria,1X3QG@135614|Xanthomonadales 135614|Xanthomonadales G COG2723 Beta-glucosidase 6-phospho-beta-glucosidase beta- galactosidase - - 3.2.1.21 ko:K05350 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - - - Glyco_hydro_1 WXD2_k127_3075206_4 666685.R2APBS1_3926 2.089e-94 321.0 COG1609@1|root,COG1609@2|Bacteria,1MVUR@1224|Proteobacteria,1RN2K@1236|Gammaproteobacteria,1X40N@135614|Xanthomonadales 135614|Xanthomonadales K LacI family rbsR - - ko:K02529 - - - - ko00000,ko03000 - - - LacI,Peripla_BP_3 WXD2_k127_3075206_7 378806.STAUR_5712 9.128e-61 232.0 COG1629@1|root,COG4771@2|Bacteria,1PSM0@1224|Proteobacteria,438J5@68525|delta/epsilon subdivisions,2X3TZ@28221|Deltaproteobacteria,2YX3R@29|Myxococcales 28221|Deltaproteobacteria P TonB dependent receptor - - - - - - - - - - - - TonB_dep_Rec WXD2_k127_3092450_2 314285.KT71_15641 1.257e-21 108.0 COG0823@1|root,COG0823@2|Bacteria,1N9FB@1224|Proteobacteria,1SCP0@1236|Gammaproteobacteria,1J91H@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria U Periplasmic component of the Tol biopolymer transport system - - - - - - - - - - - - PD40 WXD2_k127_3092450_0 661478.OP10G_1985 8.644e-56 202.0 COG0745@1|root,COG0745@2|Bacteria 661478.OP10G_1985|- T phosphorelay signal transduction system - - - - - - - - - - - - - WXD2_k127_3092450_1 696747.NIES39_A07480 7.921e-29 126.0 COG0745@1|root,COG0745@2|Bacteria,1G6Y0@1117|Cyanobacteria,1HBK8@1150|Oscillatoriales 1117|Cyanobacteria KT Response regulator receiver domain - - - - - - - - - - - - Response_reg WXD2_k127_3097309_12 204669.Acid345_0913 0.0001575 53.0 COG2304@1|root,COG2304@2|Bacteria,3Y98A@57723|Acidobacteria,2JP4V@204432|Acidobacteriia 204432|Acidobacteriia S oxidoreductase activity - - - - - - - - - - - - - WXD2_k127_3097309_0 555779.Dthio_PD2273 0.0 1078.0 COG1523@1|root,COG1523@2|Bacteria,1MU19@1224|Proteobacteria,42P3J@68525|delta/epsilon subdivisions,2WKFS@28221|Deltaproteobacteria,2MEHA@213115|Desulfovibrionales 28221|Deltaproteobacteria G Belongs to the glycosyl hydrolase 13 family - - 3.2.1.68 ko:K01214 ko00500,ko01100,ko01110,map00500,map01100,map01110 M00565 R09995,R11261 - ko00000,ko00001,ko00002,ko01000 - CBM48,GH13 - Alpha-amylase,CBM_48 WXD2_k127_3097309_8 136273.GY22_02900 3.38e-24 114.0 COG1215@1|root,COG1215@2|Bacteria,2IAQ1@201174|Actinobacteria,1WAEH@1268|Micrococcaceae 201174|Actinobacteria M Glycosyl transferase family 21 - - - - - - - - - - - - Glyco_tranf_2_3,Glyco_transf_21 WXD2_k127_3097309_1 1229780.BN381_130153 2.374e-97 346.0 COG0500@1|root,COG2226@2|Bacteria,2IEI0@201174|Actinobacteria 201174|Actinobacteria Q Methyltransferase domain - - - - - - - - - - - - DUF4214,Methyltransf_11 WXD2_k127_3097309_6 926562.Oweho_1726 1.841e-39 169.0 COG2265@1|root,COG2265@2|Bacteria 2|Bacteria J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family - - - - - - - - - - - - Methyltransf_12,Methyltransf_19,Methyltransf_25 WXD2_k127_3097309_11 1382359.JIAL01000001_gene2134 2.962e-19 91.0 COG1366@1|root,COG1366@2|Bacteria,3Y4U6@57723|Acidobacteria,2JJH2@204432|Acidobacteriia 204432|Acidobacteriia T Belongs to the anti-sigma-factor antagonist family - - - ko:K04749 - - - - ko00000,ko03021 - - - STAS WXD2_k127_3097309_2 903818.KI912268_gene1426 1.163e-88 299.0 COG1385@1|root,COG1385@2|Bacteria 2|Bacteria J rRNA (uridine-N3-)-methyltransferase activity rsmE - 2.1.1.193 ko:K09761 - - - - ko00000,ko01000,ko03009 - - - Methyltrans_RNA WXD2_k127_3097309_9 870187.Thini_1125 6.884e-24 108.0 COG4083@1|root,COG4083@2|Bacteria,1RI8D@1224|Proteobacteria,1S812@1236|Gammaproteobacteria 1236|Gammaproteobacteria S PFAM Transmembrane exosortase (Exosortase_EpsH) - - - - - - - - - - - - Exosortase_EpsH WXD2_k127_3097309_3 1519464.HY22_13745 9.183e-83 284.0 COG0618@1|root,COG0618@2|Bacteria,1FEID@1090|Chlorobi 1090|Chlorobi S 3'(2'),5'-bisphosphate nucleotidase activity - - - - - - - - - - - - - WXD2_k127_3097309_7 1007103.AFHW01000001_gene4872 4.85e-28 118.0 COG0454@1|root,COG0456@2|Bacteria,1VXFA@1239|Firmicutes,4HXK6@91061|Bacilli,272CK@186822|Paenibacillaceae 91061|Bacilli K Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_1 WXD2_k127_3097309_4 448385.sce5671 5.789e-66 228.0 COG2050@1|root,COG2050@2|Bacteria,1RBPE@1224|Proteobacteria,42RKY@68525|delta/epsilon subdivisions,2WNSM@28221|Deltaproteobacteria,2YXUH@29|Myxococcales 28221|Deltaproteobacteria Q PFAM thioesterase superfamily - - - - - - - - - - - - 4HBT WXD2_k127_3097309_5 32042.PstZobell_20910 1.195e-40 158.0 COG3124@1|root,COG3124@2|Bacteria,1MZ59@1224|Proteobacteria,1S9IZ@1236|Gammaproteobacteria,1Z08Q@136846|Pseudomonas stutzeri group 1236|Gammaproteobacteria S protein conserved in bacteria acpH GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008081,GO:0008150,GO:0008152,GO:0008610,GO:0008770,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0016788,GO:0019752,GO:0032787,GO:0042578,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:0140096,GO:1901576 3.1.4.14 ko:K08682 ko00770,map00770 - R01623 - ko00000,ko00001,ko01000 - - iAPECO1_1312.APECO1_1606,iE2348C_1286.E2348C_0339,iECNA114_1301.ECNA114_0381,iECOK1_1307.ECOK1_0384,iECS88_1305.ECS88_0399,iECSF_1327.ECSF_0364,iPC815.YPO3193,iUMN146_1321.UM146_15340,iUTI89_1310.UTI89_C0426 ACP_PD WXD2_k127_3097309_10 591159.ACEZ01000169_gene3279 9.499e-23 111.0 COG1404@1|root,COG1404@2|Bacteria,2GJYH@201174|Actinobacteria 201174|Actinobacteria O Belongs to the peptidase S8 family - - - - - - - - - - - - Inhibitor_I9,Peptidase_S8 WXD2_k127_3105907_0 243231.GSU3193 4.123e-306 959.0 COG0466@1|root,COG0466@2|Bacteria,1MUV2@1224|Proteobacteria,42M9W@68525|delta/epsilon subdivisions,2WJ29@28221|Deltaproteobacteria,43T3K@69541|Desulfuromonadales 28221|Deltaproteobacteria O ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner lon-3 - 3.4.21.53 ko:K01338 ko04112,map04112 - - - ko00000,ko00001,ko01000,ko01002 - - - AAA,LON_substr_bdg,Lon_C WXD2_k127_3105907_1 1121920.AUAU01000007_gene537 6.844e-49 178.0 COG1327@1|root,COG1327@2|Bacteria,3Y4GA@57723|Acidobacteria 57723|Acidobacteria K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes nrdR - - ko:K07738 - - - - ko00000,ko03000 - - - ATP-cone WXD2_k127_3105907_2 1047013.AQSP01000109_gene2439 3.126e-06 53.0 COG0392@1|root,COG0392@2|Bacteria 2|Bacteria M lysyltransferase activity mprF - - ko:K07027 - - - - ko00000,ko02000 4.D.2 - - LPG_synthase_TM WXD2_k127_3111804_1 290397.Adeh_3700 8.859e-74 256.0 COG0639@1|root,COG0639@2|Bacteria,1MUV1@1224|Proteobacteria,42RNB@68525|delta/epsilon subdivisions,2WNEW@28221|Deltaproteobacteria 28221|Deltaproteobacteria T PFAM Metallophosphoesterase - - - - - - - - - - - - Metallophos_2 WXD2_k127_3111804_0 290397.Adeh_3699 5.361e-97 327.0 COG0515@1|root,COG0589@1|root,COG0515@2|Bacteria,COG0589@2|Bacteria,1MV1P@1224|Proteobacteria,42VSC@68525|delta/epsilon subdivisions 1224|Proteobacteria T Protein tyrosine kinase MA20_09295 - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase,Usp WXD2_k127_3111804_4 864069.MicloDRAFT_00018290 4.03e-23 104.0 COG0515@1|root,COG0589@1|root,COG0515@2|Bacteria,COG0589@2|Bacteria,1MV1P@1224|Proteobacteria,2TQTS@28211|Alphaproteobacteria 28211|Alphaproteobacteria KLT serine threonine protein kinase MA20_09295 - - - - - - - - - - - Pkinase,Usp WXD2_k127_3111804_3 134676.ACPL_2029 2.872e-36 158.0 COG4995@1|root,COG4995@2|Bacteria,2ICQB@201174|Actinobacteria,4DKGW@85008|Micromonosporales 201174|Actinobacteria S CHAT domain - - - - - - - - - - - - CBM9_1,CHAT,Peptidase_S8,WD40 WXD2_k127_3111804_2 457429.ABJI02000048_gene5246 3.2e-69 269.0 COG1672@1|root,COG1672@2|Bacteria,2IEQ3@201174|Actinobacteria 201174|Actinobacteria S PFAM Archaeal ATPase - - - - - - - - - - - - - WXD2_k127_3116871_2 342113.DM82_2232 1.205e-05 55.0 COG2834@1|root,COG2834@2|Bacteria,1PXDV@1224|Proteobacteria,2VNNH@28216|Betaproteobacteria,1K3M9@119060|Burkholderiaceae 28216|Betaproteobacteria M Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) lolA - - ko:K03634 - - - - ko00000 - - - LolA WXD2_k127_3116871_0 525897.Dbac_2030 4.829e-73 263.0 COG0739@1|root,COG0739@2|Bacteria,1MVTF@1224|Proteobacteria,42MNF@68525|delta/epsilon subdivisions,2WIYR@28221|Deltaproteobacteria,2M9ZU@213115|Desulfovibrionales 28221|Deltaproteobacteria M PFAM Peptidase M23 - - - - - - - - - - - - Peptidase_M23 WXD2_k127_3116871_1 1131269.AQVV01000024_gene2360 1.15e-58 226.0 COG2605@1|root,COG2605@2|Bacteria 2|Bacteria G GHMP kinase - - 2.7.1.168,2.7.1.36 ko:K00869,ko:K07031 ko00540,ko00900,ko01100,ko01110,ko01130,ko04146,map00540,map00900,map01100,map01110,map01130,map04146 M00095 R02245,R09770 RC00002,RC00017,RC00078 ko00000,ko00001,ko00002,ko01000 - - - GHMP_kinases_C,GHMP_kinases_N WXD2_k127_3142601_2 706587.Desti_5232 1.64e-138 474.0 COG0553@1|root,COG0553@2|Bacteria 2|Bacteria L helicase activity CP_1034 - - - - - - - - - - - Helicase_C,SNF2_N,SWIM WXD2_k127_3142601_3 1267533.KB906737_gene1901 1.84e-129 425.0 COG0156@1|root,COG0156@2|Bacteria,3Y3J2@57723|Acidobacteria,2JI0H@204432|Acidobacteriia 204432|Acidobacteriia E Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide - - 2.3.1.29 ko:K00639 ko00260,map00260 - R00371 RC00004,RC00394 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 WXD2_k127_3142601_4 639030.JHVA01000001_gene3108 3.55e-56 203.0 COG5553@1|root,COG5553@2|Bacteria,3Y975@57723|Acidobacteria,2JNQM@204432|Acidobacteriia 204432|Acidobacteriia S Cysteine dioxygenase type I - - 1.13.11.20 ko:K00456 ko00270,ko00430,ko01100,map00270,map00430,map01100 - R00893 RC00404 ko00000,ko00001,ko01000 - - - CDO_I WXD2_k127_3142601_1 639030.JHVA01000001_gene3151 1.356e-145 475.0 COG0104@1|root,COG0104@2|Bacteria,3Y2Z9@57723|Acidobacteria,2JIIV@204432|Acidobacteriia 204432|Acidobacteriia F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP purA - 6.3.4.4 ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 M00049 R01135 RC00458,RC00459 ko00000,ko00001,ko00002,ko01000 - - - Adenylsucc_synt WXD2_k127_3142601_0 1313301.AUGC01000001_gene1467 1.374e-200 641.0 COG0308@1|root,COG0308@2|Bacteria,4NFT0@976|Bacteroidetes 976|Bacteroidetes E Peptidase family M1 - - - - - - - - - - - - Leuk-A4-hydro_C,Peptidase_M1 WXD2_k127_3151429_6 485913.Krac_8102 6.592e-40 153.0 2FA33@1|root,342C2@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_3151429_4 439235.Dalk_1959 1.305e-47 181.0 2E0G4@1|root,32W27@2|Bacteria,1N463@1224|Proteobacteria,42VTW@68525|delta/epsilon subdivisions,2WSDZ@28221|Deltaproteobacteria 28221|Deltaproteobacteria S LexA-binding, inner membrane-associated putative hydrolase - - - - - - - - - - - - YdjM WXD2_k127_3151429_3 398578.Daci_2000 8.545e-51 190.0 28M5D@1|root,2ZAJ6@2|Bacteria,1R9NN@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - WXD2_k127_3151429_7 43759.JNWK01000035_gene3291 7.626e-13 74.0 COG1670@1|root,COG1670@2|Bacteria,2IS7Y@201174|Actinobacteria 201174|Actinobacteria J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - - - - - - - - - - ABM WXD2_k127_3151429_2 861299.J421_4153 4.342e-58 212.0 arCOG07533@1|root,2ZF5I@2|Bacteria 2|Bacteria S Domain of unknown function (DUF4386) - - - - - - - - - - - - DUF4386 WXD2_k127_3151429_5 379066.GAU_3641 4.621e-44 172.0 2CHCP@1|root,32S5R@2|Bacteria,1ZV1V@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Domain of unknown function (DU1801) - - - - - - - - - - - - DUF1801 WXD2_k127_3151429_1 1123377.AUIV01000015_gene252 1.223e-59 209.0 2C7KN@1|root,32RJD@2|Bacteria,1N76T@1224|Proteobacteria,1SFST@1236|Gammaproteobacteria,1X7ED@135614|Xanthomonadales 135614|Xanthomonadales - - - - - - - - - - - - - - - WXD2_k127_3151429_0 349521.HCH_05016 4.713e-100 359.0 COG3447@1|root,COG5001@1|root,COG3447@2|Bacteria,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,1RM8A@1236|Gammaproteobacteria,1XHII@135619|Oceanospirillales 135619|Oceanospirillales T Diguanylate cyclase phosphodiesterase with PAS PAC - - - - - - - - - - - - CHASE,EAL,GGDEF,MASE1 WXD2_k127_3163877_3 269800.Tfu_0366 1.213e-14 73.0 COG0350@1|root,COG0350@2|Bacteria,2IHXW@201174|Actinobacteria,4EJA2@85012|Streptosporangiales 201174|Actinobacteria L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated ogt GO:0003674,GO:0003824,GO:0003908,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0009987,GO:0016020,GO:0016740,GO:0016741,GO:0032259,GO:0033554,GO:0034641,GO:0035510,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051409,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:1901360 2.1.1.63 ko:K00567 - - - - ko00000,ko01000,ko03400 - - - DNA_binding_1,Methyltransf_1N WXD2_k127_3163877_2 521045.Kole_1021 5.568e-47 187.0 COG0624@1|root,COG0624@2|Bacteria,2GCJE@200918|Thermotogae 200918|Thermotogae E PFAM Peptidase family M20 M25 M40 - - 3.5.1.18 ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 M00016 R02734 RC00064,RC00090 ko00000,ko00001,ko00002,ko01000 - - - M20_dimer,Peptidase_M20,Peptidase_M28 WXD2_k127_3163877_0 502025.Hoch_1577 2.839e-176 582.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,1P64D@1224|Proteobacteria,439PY@68525|delta/epsilon subdivisions,2X51T@28221|Deltaproteobacteria,2YZZT@29|Myxococcales 28221|Deltaproteobacteria KLTU Protein kinase domain - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase WXD2_k127_3163877_1 498761.HM1_2415 2.785e-63 223.0 COG1217@1|root,COG1217@2|Bacteria,1TQ5Y@1239|Firmicutes,248EB@186801|Clostridia 186801|Clostridia T GTP-binding protein TypA typA - - ko:K06207 - - - - ko00000 - - - EFG_C,EFG_II,GTP_EFTU,GTP_EFTU_D2 WXD2_k127_3176403_5 1128421.JAGA01000003_gene2875 6.323e-12 73.0 2EJZ3@1|root,33DPP@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_3176403_2 204669.Acid345_2997 1.012e-75 270.0 COG1999@1|root,COG1999@2|Bacteria,3Y3XH@57723|Acidobacteria,2JIUU@204432|Acidobacteriia 204432|Acidobacteriia S signal sequence binding - - - ko:K07152 - - - - ko00000,ko03029 - - - - WXD2_k127_3176403_1 1128421.JAGA01000003_gene2877 5.304e-103 345.0 COG1622@1|root,COG2010@1|root,COG1622@2|Bacteria,COG2010@2|Bacteria,2NNSH@2323|unclassified Bacteria 2|Bacteria C Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) coxB GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 ko:K02275,ko:K17223 ko00190,ko00920,ko01100,ko01120,map00190,map00920,map01100,map01120 M00155,M00595 R00081,R10151 RC00016,RC03151,RC03152 ko00000,ko00001,ko00002,ko01000 3.D.4.2,3.D.4.4,3.D.4.6 - - COX2,COX2_TM,Cytochrom_C,Cytochrome_CBB3 WXD2_k127_3176403_0 234267.Acid_0498 1.456e-264 823.0 COG0843@1|root,COG0843@2|Bacteria,3Y2X6@57723|Acidobacteria 57723|Acidobacteria C Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B - - 1.9.3.1 ko:K02274 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.2,3.D.4.3,3.D.4.4,3.D.4.6 - - COX1 WXD2_k127_3176403_3 1267533.KB906741_gene402 1.625e-64 230.0 COG1845@1|root,COG1845@2|Bacteria,3Y414@57723|Acidobacteria,2JI50@204432|Acidobacteriia 204432|Acidobacteriia C PFAM cytochrome c oxidase subunit III - - 1.9.3.1 ko:K02276 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.4,3.D.4.6 - - COX3 WXD2_k127_3176403_4 1128421.JAGA01000003_gene2880 2.07e-19 91.0 2ASAK@1|root,31HPU@2|Bacteria,2NQ6K@2323|unclassified Bacteria 2|Bacteria S Prokaryotic Cytochrome C oxidase subunit IV - - 1.9.3.1 ko:K02277 ko00190,ko01100,map00190,map01100 M00155 - - ko00000,ko00001,ko00002,ko01000 3.D.4.4 - - COX4_pro WXD2_k127_3181783_4 359.CN09_07890 1.825e-05 57.0 COG4775@1|root,COG4775@2|Bacteria,1MU0D@1224|Proteobacteria,2TR7W@28211|Alphaproteobacteria,4B8YV@82115|Rhizobiaceae 28211|Alphaproteobacteria M Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane bamA - - ko:K07277 - - - - ko00000,ko02000,ko03029 1.B.33 - - Bac_surface_Ag,POTRA WXD2_k127_3181783_0 1288826.MSNKSG1_01983 3.513e-115 380.0 COG3239@1|root,COG3239@2|Bacteria,1MY4I@1224|Proteobacteria,1S726@1236|Gammaproteobacteria 1236|Gammaproteobacteria I Fatty acid desaturase - - 1.14.19.23,1.14.19.45 ko:K10255 ko02020,map02020 - - - ko00000,ko00001,ko01000,ko01004 - - - FA_desaturase WXD2_k127_3181783_3 1434325.AZQN01000011_gene3742 1.426e-27 121.0 28N6F@1|root,2ZBBB@2|Bacteria,4NGM1@976|Bacteroidetes,47P0U@768503|Cytophagia 976|Bacteroidetes - - - - - - - - - - - - - - - WXD2_k127_3181783_1 1437425.CSEC_0969 2.749e-104 351.0 COG0306@1|root,COG0306@2|Bacteria,2JH20@204428|Chlamydiae 204428|Chlamydiae P Phosphate transporter family - - - ko:K03306 - - - - ko00000 2.A.20 - - PHO4 WXD2_k127_3181783_2 452637.Oter_0556 4.126e-29 125.0 COG3391@1|root,COG3391@2|Bacteria,46UA2@74201|Verrucomicrobia 74201|Verrucomicrobia O PFAM NHL repeat containing protein - - - - - - - - - - - - Ig_3,NHL WXD2_k127_3197532_3 204669.Acid345_2530 1.173e-86 289.0 COG0330@1|root,COG0330@2|Bacteria,3Y33E@57723|Acidobacteria,2JHPX@204432|Acidobacteriia 204432|Acidobacteriia O SMART band 7 protein - - - - - - - - - - - - Band_7 WXD2_k127_3197532_8 1173025.GEI7407_3101 5.333e-40 169.0 COG4713@1|root,COG4713@2|Bacteria,1G496@1117|Cyanobacteria,1HAGJ@1150|Oscillatoriales 1117|Cyanobacteria S Predicted membrane protein (DUF2142) - - - - - - - - - - - - DUF2142 WXD2_k127_3197532_7 290397.Adeh_0191 6.87e-57 207.0 COG2193@1|root,COG2193@2|Bacteria,1RCW7@1224|Proteobacteria,42SK2@68525|delta/epsilon subdivisions,2WPB3@28221|Deltaproteobacteria,2Z0CU@29|Myxococcales 28221|Deltaproteobacteria P Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex bfr GO:0006873,GO:0006875,GO:0006879,GO:0006880,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0097577,GO:0098771 1.16.3.1 ko:K03594 ko00860,map00860 - R00078 RC02758 ko00000,ko00001,ko01000 - - - Ferritin WXD2_k127_3197532_9 1117318.PRUB_23171 6.464e-06 51.0 COG2906@1|root,COG2906@2|Bacteria,1NGGY@1224|Proteobacteria,1SGGM@1236|Gammaproteobacteria,2Q3A1@267888|Pseudoalteromonadaceae 1236|Gammaproteobacteria P BFD-like [2Fe-2S] binding domain bfd - - ko:K02192 - - - - ko00000 - - - Fer2_BFD WXD2_k127_3197532_6 861299.J421_2234 5.565e-57 203.0 COG1376@1|root,COG1376@2|Bacteria 2|Bacteria D ErfK ybiS ycfS ynhG family protein ykuD - - ko:K19234 - - - - ko00000,ko01002,ko01011 - - - LysM,YkuD WXD2_k127_3197532_10 479437.Elen_2295 0.0005687 47.0 COG0745@1|root,COG0745@2|Bacteria,2IGM3@201174|Actinobacteria,4CV5P@84998|Coriobacteriia 84998|Coriobacteriia K response regulator receiver - - - - - - - - - - - - Response_reg,Trans_reg_C WXD2_k127_3197532_1 290397.Adeh_2943 6.919e-122 415.0 COG0784@1|root,COG3437@1|root,COG5002@1|root,COG0784@2|Bacteria,COG3437@2|Bacteria,COG5002@2|Bacteria,1NC9X@1224|Proteobacteria 1224|Proteobacteria T Histidine kinase - - 2.1.1.80,3.1.1.61 ko:K13924 ko02020,ko02030,map02020,map02030 M00506 - - ko00000,ko00001,ko00002,ko01000,ko02022,ko02035 - - - HATPase_c,HisKA,Response_reg WXD2_k127_3197532_0 543728.Vapar_1657 3.004e-172 557.0 COG0467@1|root,COG0467@2|Bacteria,1NEWW@1224|Proteobacteria,2VIKV@28216|Betaproteobacteria,4AESP@80864|Comamonadaceae 28216|Betaproteobacteria T KaiC - - - ko:K08482 - - - - ko00000 - - - ATPase WXD2_k127_3197532_4 518766.Rmar_2600 6.277e-85 289.0 COG0412@1|root,COG0412@2|Bacteria,4NE8V@976|Bacteroidetes,1FJNW@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes Q Dienelactone hydrolase family - - 3.1.1.45 ko:K01061 ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130 - R03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222 RC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686 ko00000,ko00001,ko01000 - - - DLH WXD2_k127_3197532_11 1173027.Mic7113_6277 0.0005772 49.0 COG3678@1|root,COG3678@2|Bacteria,1G8W2@1117|Cyanobacteria,1HHJ4@1150|Oscillatoriales 1117|Cyanobacteria NPTU ATP-independent chaperone mediated protein folding - - - - - - - - - - - - - WXD2_k127_3197532_2 518766.Rmar_1861 1.02e-100 342.0 COG2972@1|root,COG2972@2|Bacteria,4NK4J@976|Bacteroidetes,1FIPJ@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes T Histidine kinase - - - - - - - - - - - - HATPase_c,His_kinase WXD2_k127_3197532_5 309807.SRU_2327 2.701e-77 269.0 COG3279@1|root,COG3279@2|Bacteria,4NEAH@976|Bacteroidetes,1FJ14@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes K LytTr DNA-binding domain - - - ko:K02477 - - - - ko00000,ko02022 - - - LytTR,Response_reg WXD2_k127_3205392_0 1382359.JIAL01000001_gene383 3.624e-111 363.0 COG2876@1|root,COG2876@2|Bacteria,3Y32G@57723|Acidobacteria,2JIXH@204432|Acidobacteriia 204432|Acidobacteriia E NeuB family - - 2.5.1.54 ko:K03856 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R01826 RC00435 ko00000,ko00001,ko00002,ko01000 - - - DAHP_synth_1 WXD2_k127_3205392_2 886293.Sinac_3650 2.297e-68 241.0 COG2318@1|root,COG2318@2|Bacteria,2IZ34@203682|Planctomycetes 203682|Planctomycetes S Mycothiol maleylpyruvate isomerase N-terminal domain - - - - - - - - - - - - MDMPI_N WXD2_k127_3205392_1 1274374.CBLK010000009_gene4364 3.894e-104 355.0 COG0469@1|root,COG0469@2|Bacteria,1TPGG@1239|Firmicutes,4H9VY@91061|Bacilli,26RI3@186822|Paenibacillaceae 91061|Bacilli G Catalyzes the formation of phosphoenolpyruvate from pyruvate pyk GO:0001871,GO:0003674,GO:0003824,GO:0004743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006116,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0030246,GO:0030247,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:2001065 2.7.1.40 ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 M00001,M00002,M00049,M00050 R00200,R00430,R01138,R01858,R02320 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 - - - PEP-utilizers,PK,PK_C WXD2_k127_3223358_4 313596.RB2501_05345 2.864e-17 83.0 COG1476@1|root,COG1476@2|Bacteria,4NV53@976|Bacteroidetes,1I527@117743|Flavobacteriia 976|Bacteroidetes K transcriptional regulator - - - ko:K07729 - - - - ko00000,ko03000 - - - HTH_3 WXD2_k127_3223358_2 1297742.A176_01978 3.177e-42 169.0 COG0596@1|root,COG0596@2|Bacteria,1R4N4@1224|Proteobacteria,434SV@68525|delta/epsilon subdivisions,2WZ3Y@28221|Deltaproteobacteria,2Z19T@29|Myxococcales 28221|Deltaproteobacteria S Hydrolase - - - - - - - - - - - - Abhydrolase_1,Abhydrolase_6 WXD2_k127_3223358_5 439235.Dalk_1780 9.068e-10 67.0 COG3047@1|root,COG3047@2|Bacteria,1Q8PV@1224|Proteobacteria,437GB@68525|delta/epsilon subdivisions,2X2NY@28221|Deltaproteobacteria,2MP63@213118|Desulfobacterales 2|Bacteria M OmpW family ompW GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - ko:K07275,ko:K16079 - - - - ko00000,ko02000 1.B.4.2.1 - - OmpW WXD2_k127_3223358_0 1239962.C943_00440 4.584e-85 290.0 COG1230@1|root,COG1230@2|Bacteria,4NGFR@976|Bacteroidetes,47JG9@768503|Cytophagia 976|Bacteroidetes P Co Zn Cd efflux system component - - - - - - - - - - - - Cation_efflux WXD2_k127_3223358_3 713586.KB900536_gene2872 4.986e-36 144.0 COG1309@1|root,COG1309@2|Bacteria,1RBV0@1224|Proteobacteria 1224|Proteobacteria K COG1309 Transcriptional regulator - - - - - - - - - - - - TetR_N WXD2_k127_3223358_1 180281.CPCC7001_1845 1.747e-76 259.0 COG0426@1|root,COG0426@2|Bacteria,1GPET@1117|Cyanobacteria,22SW2@167375|Cyanobium 1117|Cyanobacteria C domain, Protein - - - - - - - - - - - - - WXD2_k127_3244642_7 340.xcc-b100_1570 2.272e-16 93.0 COG3852@1|root,COG3852@2|Bacteria,1NTTH@1224|Proteobacteria,1T1M4@1236|Gammaproteobacteria,1XAT6@135614|Xanthomonadales 135614|Xanthomonadales T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - - - - - - - - - - HAMP,HATPase_c,HisKA WXD2_k127_3244642_4 1242864.D187_001446 3.009e-38 164.0 COG0642@1|root,COG2202@1|root,COG5000@1|root,COG2202@2|Bacteria,COG2205@2|Bacteria,COG5000@2|Bacteria,1NRP8@1224|Proteobacteria,4372J@68525|delta/epsilon subdivisions,2X1U4@28221|Deltaproteobacteria,2YZ0W@29|Myxococcales 28221|Deltaproteobacteria T Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - - - - - - - - - - GAF_2,HATPase_c,HisKA,PAS_3,Response_reg WXD2_k127_3244642_3 1173027.Mic7113_0231 8.719e-60 218.0 2DBB1@1|root,2Z854@2|Bacteria,1G05N@1117|Cyanobacteria,1H7Z3@1150|Oscillatoriales 1117|Cyanobacteria S Domain of Unknown Function (DUF1206) - - - - - - - - - - - - DUF1206 WXD2_k127_3244642_8 502025.Hoch_6816 3.938e-15 85.0 2A20V@1|root,30QAU@2|Bacteria,1RDQH@1224|Proteobacteria,4330X@68525|delta/epsilon subdivisions,2WXN7@28221|Deltaproteobacteria,2Z0X5@29|Myxococcales 28221|Deltaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_3244642_1 639030.JHVA01000001_gene1971 4.24e-83 284.0 COG0748@1|root,COG0748@2|Bacteria,3Y2Q3@57723|Acidobacteria,2JMJG@204432|Acidobacteriia 204432|Acidobacteriia P Pyridoxamine 5'-phosphate oxidase - - - ko:K07226 - - - - ko00000 - - - DUF2470,Pyrid_oxidase_2 WXD2_k127_3244642_6 1120959.ATXF01000004_gene2423 3.028e-32 130.0 COG2346@1|root,COG2346@2|Bacteria,2IJM0@201174|Actinobacteria,4FP3E@85023|Microbacteriaceae 201174|Actinobacteria S COG2346, Truncated hemoglobins - - - ko:K06886 - - - - ko00000 - - - - WXD2_k127_3244642_0 1499967.BAYZ01000100_gene3445 1.701e-95 330.0 COG0492@1|root,COG0492@2|Bacteria,2NS2I@2323|unclassified Bacteria 2|Bacteria O Pyridine nucleotide-disulphide oxidoreductase ypdA - 1.18.1.2,1.19.1.1,1.8.1.9 ko:K00384,ko:K21567 ko00450,map00450 - R02016,R03596,R09372 RC00013,RC02518,RC02873 ko00000,ko00001,ko01000 - - - Pyr_redox_3 WXD2_k127_3244642_5 1047013.AQSP01000079_gene2043 7.078e-35 144.0 COG0810@1|root,COG0810@2|Bacteria,2NQ1D@2323|unclassified Bacteria 2|Bacteria M Gram-negative bacterial TonB protein C-terminal - - - ko:K03832 - - - - ko00000,ko02000 2.C.1.1 - - CarbopepD_reg_2,TonB_C WXD2_k127_3244642_2 1340493.JNIF01000003_gene1848 6.34e-61 219.0 COG0811@1|root,COG0811@2|Bacteria,3Y2M4@57723|Acidobacteria 57723|Acidobacteria U MotA TolQ ExbB proton channel - - - ko:K03561,ko:K03562 ko01120,map01120 - - - ko00000,ko02000 1.A.30.2.1,1.A.30.2.2 - - MotA_ExbB WXD2_k127_3244642_9 1117319.PSPO_09989 0.0002103 45.0 COG0848@1|root,COG0848@2|Bacteria,1MZ6M@1224|Proteobacteria,1S9R6@1236|Gammaproteobacteria,2Q4XC@267888|Pseudoalteromonadaceae 1236|Gammaproteobacteria U Biopolymer transport protein ExbD/TolR exbD1 - - ko:K03559 - - - - ko00000,ko02000 1.A.30.2.1 - - ExbD WXD2_k127_3256086_0 1307761.L21SP2_3217 7.435e-266 842.0 COG0058@1|root,COG0058@2|Bacteria,2J5KC@203691|Spirochaetes 203691|Spirochaetes G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties glgP - 2.4.1.1 ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 - R02111 - ko00000,ko00001,ko01000 - GT35 - Phosphorylase WXD2_k127_3256086_2 880073.Calab_1272 1.58e-08 64.0 COG3303@1|root,COG3303@2|Bacteria 2|Bacteria C Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - 1.7.2.2 ko:K03385 ko00910,ko01120,ko05132,map00910,map01120,map05132 M00530 R05712 RC00176 ko00000,ko00001,ko00002,ko01000 - - - Cytochrom_C552,Paired_CXXCH_1 WXD2_k127_3256086_1 1370120.AUWR01000011_gene1125 6.042e-09 64.0 COG1309@1|root,COG1309@2|Bacteria,2I8DN@201174|Actinobacteria,234QE@1762|Mycobacteriaceae 201174|Actinobacteria K tetR family - - - - - - - - - - - - TetR_C_6,TetR_N WXD2_k127_3257104_1 234267.Acid_2204 4.288e-37 149.0 COG0698@1|root,COG0698@2|Bacteria 2|Bacteria G galactose-6-phosphate isomerase activity upp - 2.4.2.9,5.3.1.6 ko:K00761,ko:K01808 ko00030,ko00051,ko00240,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00240,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R00966,R01056,R09030 RC00063,RC00376,RC00434 ko00000,ko00001,ko00002,ko01000 - - - LacAB_rpiB,UPRTase WXD2_k127_3257104_0 324602.Caur_0649 7.12e-62 235.0 COG1404@1|root,COG4447@1|root,COG1404@2|Bacteria,COG4447@2|Bacteria,2G8UU@200795|Chloroflexi,3759F@32061|Chloroflexia 32061|Chloroflexia O PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - - - - - - - - - - Kelch_4,Kelch_5,Peptidase_S8 WXD2_k127_3260186_6 592015.HMPREF1705_00192 5.532e-30 120.0 COG0335@1|root,COG0335@2|Bacteria,3TB9G@508458|Synergistetes 508458|Synergistetes J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site rplS - - ko:K02884 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L19 WXD2_k127_3260186_4 1408226.T233_00417 2.368e-51 193.0 COG0164@1|root,COG0164@2|Bacteria,1V1D6@1239|Firmicutes,4HB7M@91061|Bacilli,4AZE6@81852|Enterococcaceae 91061|Bacilli L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids rnhB GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 ko:K03470 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - RNase_HII WXD2_k127_3260186_1 1297742.A176_05309 4.617e-72 276.0 COG0457@1|root,COG0457@2|Bacteria,1R7RK@1224|Proteobacteria,42PPY@68525|delta/epsilon subdivisions,2WKX6@28221|Deltaproteobacteria,2YUCP@29|Myxococcales 28221|Deltaproteobacteria NU Tetratricopeptide repeats - - - - - - - - - - - - TPR_11,TPR_16,TPR_19 WXD2_k127_3260186_8 452637.Oter_3684 1.246e-20 101.0 COG1595@1|root,COG1595@2|Bacteria,46Y89@74201|Verrucomicrobia,3K93Q@414999|Opitutae 414999|Opitutae K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 WXD2_k127_3260186_9 279714.FuraDRAFT_1826 1.704e-16 90.0 COG0265@1|root,COG0265@2|Bacteria,1MU63@1224|Proteobacteria,2VI4Q@28216|Betaproteobacteria,2KPBX@206351|Neisseriales 206351|Neisseriales M Belongs to the peptidase S1C family mucD - 3.4.21.107 ko:K04771 ko01503,ko02020,map01503,map02020 M00728 - - ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 - - - PDZ_2,Trypsin_2 WXD2_k127_3260186_5 1047013.AQSP01000109_gene2436 1.482e-45 182.0 COG0611@1|root,COG0611@2|Bacteria,2NP8J@2323|unclassified Bacteria 2|Bacteria H Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 thiL GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009030,GO:0009058,GO:0009108,GO:0009110,GO:0009228,GO:0009229,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0040007,GO:0042357,GO:0042364,GO:0042723,GO:0042724,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.4.16 ko:K00946,ko:K07123 ko00730,ko01100,map00730,map01100 M00127 R00617 RC00002 ko00000,ko00001,ko00002,ko01000 - - iNJ661.Rv2977c,iSFV_1184.SFV_0382,iYO844.BSU05900 AIRS,AIRS_C WXD2_k127_3260186_2 1191523.MROS_1190 3.19e-69 243.0 COG0101@1|root,COG0101@2|Bacteria 2|Bacteria J tRNA pseudouridine synthase activity truA GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 ko:K06173 - - - - ko00000,ko01000,ko03016 - - - PseudoU_synth_1 WXD2_k127_3260186_7 497964.CfE428DRAFT_2157 5.214e-25 118.0 COG3536@1|root,COG3536@2|Bacteria 2|Bacteria S Protein of unknown function (DUF971) - - - ko:K03593 - - - - ko00000,ko03029,ko03036 - - - DUF971 WXD2_k127_3260186_0 1121920.AUAU01000009_gene1869 1.778e-108 360.0 COG0549@1|root,COG0549@2|Bacteria,3Y7CP@57723|Acidobacteria 57723|Acidobacteria E Amino acid kinase family - - 2.7.2.2 ko:K00926 ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200 - R00150,R01395 RC00002,RC00043,RC02803,RC02804 ko00000,ko00001,ko01000 - - - AA_kinase WXD2_k127_3260186_3 1121920.AUAU01000006_gene258 1.04e-56 205.0 COG2235@1|root,COG2235@2|Bacteria,3Y86Y@57723|Acidobacteria 57723|Acidobacteria E Amidinotransferase - - 3.5.3.6 ko:K01478 ko00220,ko01100,ko01110,ko01130,map00220,map01100,map01110,map01130 - R00552 RC00177 ko00000,ko00001,ko01000 - - - Amidinotransf WXD2_k127_3280076_2 1118054.CAGW01000089_gene3484 4.332e-86 296.0 COG1277@1|root,COG1277@2|Bacteria,1TRV1@1239|Firmicutes,4HBBV@91061|Bacilli,26SYW@186822|Paenibacillaceae 91061|Bacilli S ABC transporter permease bcrB - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_2 WXD2_k127_3280076_1 1329516.JPST01000003_gene1081 4.262e-87 297.0 COG1131@1|root,COG1131@2|Bacteria,1TP4J@1239|Firmicutes,4HBGH@91061|Bacilli,27BKK@186824|Thermoactinomycetaceae 91061|Bacilli V ATP binding cassette transporter ABC protein bcrA - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran WXD2_k127_3280076_3 1087481.AGFX01000011_gene4184 5.622e-33 137.0 COG2755@1|root,COG2755@2|Bacteria,1V1HR@1239|Firmicutes,4HDXS@91061|Bacilli,26TYK@186822|Paenibacillaceae 91061|Bacilli E lipolytic protein G-D-S-L family ypmR1 - - - - - - - - - - - Lipase_GDSL_2 WXD2_k127_3280076_0 1304872.JAGC01000003_gene2613 3.113e-194 632.0 COG4447@1|root,COG4447@2|Bacteria,1MVIT@1224|Proteobacteria,42S9Y@68525|delta/epsilon subdivisions,2WNFW@28221|Deltaproteobacteria 28221|Deltaproteobacteria G K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - - - - - - - - - - Sortilin-Vps10 WXD2_k127_3281365_8 639282.DEFDS_0199 1.278e-29 128.0 2ABSM@1|root,31194@2|Bacteria,2GFFJ@200930|Deferribacteres 200930|Deferribacteres - - - - - - - - - - - - - - - WXD2_k127_3281365_5 631454.N177_1281 7.093e-65 236.0 COG0635@1|root,COG0635@2|Bacteria,1MU76@1224|Proteobacteria,2TT63@28211|Alphaproteobacteria,1JNC6@119043|Rhodobiaceae 28211|Alphaproteobacteria H HemN C-terminal domain hemN - - - - - - - - - - - HemN_C,Radical_SAM WXD2_k127_3281365_1 204669.Acid345_3335 7.899e-106 365.0 COG2206@1|root,COG5000@1|root,COG2206@2|Bacteria,COG5000@2|Bacteria,3Y7I5@57723|Acidobacteria,2JMTE@204432|Acidobacteriia 204432|Acidobacteriia T HD domain - - - - - - - - - - - - HD WXD2_k127_3281365_10 1340493.JNIF01000003_gene3616 6.415e-05 55.0 COG0457@1|root,COG0457@2|Bacteria 1340493.JNIF01000003_gene3616|- S peptidyl-tyrosine sulfation - - - - - - - - - - - - - WXD2_k127_3281365_9 1232410.KI421425_gene1525 6.054e-09 61.0 COG2018@1|root,COG2018@2|Bacteria,1N5TV@1224|Proteobacteria,42UGD@68525|delta/epsilon subdivisions,2WQXP@28221|Deltaproteobacteria,43SPK@69541|Desulfuromonadales 28221|Deltaproteobacteria S Roadblock/LC7 domain - - - - - - - - - - - - Robl_LC7 WXD2_k127_3281365_3 1120985.AUMI01000014_gene1159 4.551e-88 314.0 COG1703@1|root,COG1703@2|Bacteria,1TQT4@1239|Firmicutes,4H1WI@909932|Negativicutes 909932|Negativicutes E LAO AO transport system argK - - ko:K07588 - - - - ko00000,ko01000 - - - ArgK WXD2_k127_3281365_0 204669.Acid345_2369 1.865e-153 504.0 COG1960@1|root,COG1960@2|Bacteria,3Y3T6@57723|Acidobacteria,2JIV6@204432|Acidobacteriia 204432|Acidobacteriia I Acyl-CoA dehydrogenase, C-terminal domain - - - - - - - - - - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N WXD2_k127_3281365_6 682795.AciX8_3374 1.384e-36 144.0 COG2318@1|root,COG2318@2|Bacteria,3Y569@57723|Acidobacteria,2JMW6@204432|Acidobacteriia 204432|Acidobacteriia S DinB superfamily - - - - - - - - - - - - DinB_2 WXD2_k127_3281365_2 1379270.AUXF01000007_gene875 9.999e-97 327.0 COG0656@1|root,COG0656@2|Bacteria,1ZURF@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Aldo/keto reductase family - - - - - - - - - - - - Aldo_ket_red WXD2_k127_3281365_4 1173023.KE650771_gene1475 9.18e-76 265.0 COG3467@1|root,COG3467@2|Bacteria,1G4RC@1117|Cyanobacteria,1JJWX@1189|Stigonemataceae 1117|Cyanobacteria S Pyridoxamine 5'-phosphate oxidase - - - ko:K07005 - - - - ko00000 - - - Pyridox_ox_2 WXD2_k127_3281365_7 926549.KI421517_gene2118 4.008e-35 136.0 COG0454@1|root,COG0456@2|Bacteria,4NRS1@976|Bacteroidetes,47YIY@768503|Cytophagia 976|Bacteroidetes K Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_10 WXD2_k127_3296900_3 1242864.D187_001443 1.167e-45 168.0 COG0421@1|root,COG0457@1|root,COG0421@2|Bacteria,COG0457@2|Bacteria,1QXA2@1224|Proteobacteria,43C3D@68525|delta/epsilon subdivisions,2WUH2@28221|Deltaproteobacteria,2YYH4@29|Myxococcales 28221|Deltaproteobacteria E Spermine/spermidine synthase domain - - - - - - - - - - - - Spermine_synth WXD2_k127_3296900_0 671143.DAMO_1326 2.753e-152 488.0 COG0468@1|root,COG0468@2|Bacteria,2NNYW@2323|unclassified Bacteria 2|Bacteria L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage recA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009292,GO:0009294,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030420,GO:0031668,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0046483,GO:0050896,GO:0051704,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:1901360 - ko:K03553 ko03440,map03440 M00729 - - ko00000,ko00001,ko00002,ko03400 - - - RecA WXD2_k127_3296900_4 502025.Hoch_6830 1.668e-34 142.0 COG0564@1|root,COG0564@2|Bacteria,1MUBN@1224|Proteobacteria,43B0F@68525|delta/epsilon subdivisions,2X6EI@28221|Deltaproteobacteria,2Z3AT@29|Myxococcales 28221|Deltaproteobacteria J Responsible for synthesis of pseudouridine from uracil - - - - - - - - - - - - PseudoU_synth_2,S4 WXD2_k127_3296900_1 1232410.KI421428_gene1166 3.555e-74 253.0 COG5405@1|root,COG5405@2|Bacteria,1MVF2@1224|Proteobacteria,42MEH@68525|delta/epsilon subdivisions,2WMSC@28221|Deltaproteobacteria,43SFW@69541|Desulfuromonadales 28221|Deltaproteobacteria O Proteasome subunit hslV - 3.4.25.2 ko:K01419 - - - - ko00000,ko01000,ko01002 - - - Proteasome WXD2_k127_3296900_2 639030.JHVA01000001_gene2364 8.366e-54 190.0 COG1220@1|root,COG1220@2|Bacteria,3Y2K2@57723|Acidobacteria,2JIS7@204432|Acidobacteriia 204432|Acidobacteriia O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis hslU - - ko:K03667 - - - - ko00000,ko03110 - - - AAA_2,ClpB_D2-small WXD2_k127_3313573_3 1217720.ALOX01000052_gene1543 2.042e-19 95.0 COG2995@1|root,COG2995@2|Bacteria,1MWG1@1224|Proteobacteria,2TT3D@28211|Alphaproteobacteria 28211|Alphaproteobacteria S paraquat-inducible protein A - - - ko:K03808 - - - - ko00000 - - - PqiA WXD2_k127_3313573_1 572477.Alvin_0342 1.245e-63 244.0 COG1463@1|root,COG3008@1|root,COG1463@2|Bacteria,COG3008@2|Bacteria,1MU1T@1224|Proteobacteria,1RN89@1236|Gammaproteobacteria,1WWQS@135613|Chromatiales 135613|Chromatiales Q PFAM Mammalian cell entry related - - - ko:K06192 - - - - ko00000 - - - MlaD WXD2_k127_3313573_4 395019.Bmul_5821 1.628e-18 93.0 COG3009@1|root,COG3009@2|Bacteria,1NPN2@1224|Proteobacteria,2W7SY@28216|Betaproteobacteria,1K63S@119060|Burkholderiaceae 28216|Betaproteobacteria S ABC-type transport auxiliary lipoprotein component - - - ko:K09857 - - - - ko00000 - - - ABC_trans_aux WXD2_k127_3313573_2 1499968.TCA2_3177 1.559e-29 136.0 COG5552@1|root,COG5552@2|Bacteria,1VCIJ@1239|Firmicutes,4HKXG@91061|Bacilli,26Z0F@186822|Paenibacillaceae 91061|Bacilli S Uncharacterized conserved protein (DUF2277) - - - - - - - - - - - - DUF2277 WXD2_k127_3313573_0 378806.STAUR_1293 9.934e-192 612.0 COG0366@1|root,COG0366@2|Bacteria,1MVKX@1224|Proteobacteria,43740@68525|delta/epsilon subdivisions,2X1YD@28221|Deltaproteobacteria,2YWVB@29|Myxococcales 28221|Deltaproteobacteria G Alpha-amylase domain - - 3.2.1.1 ko:K01176 ko00500,ko01100,ko04973,map00500,map01100,map04973 - R02108,R02112,R11262 - ko00000,ko00001,ko01000 - GH13 - Alpha-amylase WXD2_k127_3319795_1 240292.Ava_3338 1.218e-78 273.0 COG1028@1|root,COG1028@2|Bacteria,1G2FK@1117|Cyanobacteria,1HMHE@1161|Nostocales 1117|Cyanobacteria IQ Enoyl-(Acyl carrier protein) reductase - - 1.1.1.206 ko:K08081 ko00960,ko01100,ko01110,map00960,map01100,map01110 - R02832 RC00144 ko00000,ko00001,ko01000 - - - adh_short_C2 WXD2_k127_3319795_5 1198114.AciX9_3050 2.587e-41 158.0 COG1109@1|root,COG1109@2|Bacteria,3Y36F@57723|Acidobacteria,2JHU9@204432|Acidobacteriia 204432|Acidobacteriia G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate glmM - 5.4.2.10 ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 - R02060 RC00408 ko00000,ko00001,ko01000 - - - PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV WXD2_k127_3319795_3 1267534.KB906759_gene1844 4.319e-64 228.0 COG1109@1|root,COG1109@2|Bacteria,3Y36F@57723|Acidobacteria,2JHU9@204432|Acidobacteriia 204432|Acidobacteriia G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate glmM - 5.4.2.10 ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 - R02060 RC00408 ko00000,ko00001,ko01000 - - - PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV WXD2_k127_3319795_6 871968.DESME_02465 2.592e-15 86.0 COG4856@1|root,COG4856@2|Bacteria,1TSIV@1239|Firmicutes,24GKC@186801|Clostridia,2612S@186807|Peptococcaceae 186801|Clostridia S PFAM YbbR-like protein - - - - - - - - - - - - YbbR WXD2_k127_3319795_4 1123376.AUIU01000011_gene928 1.965e-51 196.0 COG1624@1|root,COG1624@2|Bacteria,3J0XP@40117|Nitrospirae 40117|Nitrospirae S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria dacA - 2.7.7.85 ko:K18672 - - - - ko00000,ko01000 - - - DisA_N WXD2_k127_3319795_2 96561.Dole_3045 1.156e-71 252.0 COG0294@1|root,COG0294@2|Bacteria,1MUIR@1224|Proteobacteria,42MMY@68525|delta/epsilon subdivisions,2WIXA@28221|Deltaproteobacteria,2MITP@213118|Desulfobacterales 28221|Deltaproteobacteria H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives folP - 2.5.1.15,2.7.6.3 ko:K00796,ko:K13941 ko00790,ko01100,map00790,map01100 M00126,M00840,M00841 R03066,R03067,R03503 RC00002,RC00017,RC00121,RC00842 ko00000,ko00001,ko00002,ko01000 - - - Pterin_bind WXD2_k127_3319795_0 316274.Haur_0837 8.581e-159 512.0 COG0766@1|root,COG0766@2|Bacteria,2G666@200795|Chloroflexi,374XF@32061|Chloroflexia 32061|Chloroflexia M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine murA - 2.5.1.7 ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 - R00660 RC00350 ko00000,ko00001,ko01000,ko01011 - - - EPSP_synthase WXD2_k127_332348_2 1089545.KB913037_gene470 3.676e-08 63.0 COG1404@1|root,COG1404@2|Bacteria,2IFQ2@201174|Actinobacteria 201174|Actinobacteria O Subtilase family - - - - - - - - - - - - Peptidase_S8 WXD2_k127_332348_0 204669.Acid345_2476 6.404e-64 252.0 COG0729@1|root,COG4775@1|root,COG0729@2|Bacteria,COG4775@2|Bacteria,3Y2RF@57723|Acidobacteria,2JHK5@204432|Acidobacteriia 204432|Acidobacteriia M surface antigen variable number - - - - - - - - - - - - Bac_surface_Ag,POTRA WXD2_k127_332348_1 278963.ATWD01000001_gene1705 1.211e-61 245.0 COG2911@1|root,COG2911@2|Bacteria,3Y3A6@57723|Acidobacteria,2JHS8@204432|Acidobacteriia 204432|Acidobacteriia M TamB, inner membrane protein subunit of TAM complex - - - ko:K09800 - - - - ko00000,ko02000 - - - TamB WXD2_k127_3327607_3 483219.LILAB_25445 5.084e-35 135.0 COG3239@1|root,COG3239@2|Bacteria,1MY4I@1224|Proteobacteria,42QFN@68525|delta/epsilon subdivisions,2WKUY@28221|Deltaproteobacteria,2YWD0@29|Myxococcales 28221|Deltaproteobacteria I Fatty acid desaturase - - 1.14.19.23,1.14.19.45 ko:K10255 ko02020,map02020 - - - ko00000,ko00001,ko01000,ko01004 - - - FA_desaturase WXD2_k127_3327607_0 215803.DB30_1485 1.749e-196 627.0 COG2931@1|root,COG2931@2|Bacteria,1QX4P@1224|Proteobacteria,439K8@68525|delta/epsilon subdivisions,2X4WY@28221|Deltaproteobacteria,2YZS2@29|Myxococcales 28221|Deltaproteobacteria Q PAP2 superfamily - - - - - - - - - - - - PAP2 WXD2_k127_3327607_2 1173027.Mic7113_1203 6.96e-42 161.0 COG0705@1|root,COG0705@2|Bacteria,1G5DT@1117|Cyanobacteria,1H961@1150|Oscillatoriales 1117|Cyanobacteria S PFAM Rhomboid family - - - - - - - - - - - - Rhomboid WXD2_k127_3327607_1 926550.CLDAP_07610 5.515e-52 194.0 COG1960@1|root,COG1960@2|Bacteria,2G7Q9@200795|Chloroflexi 200795|Chloroflexi C Acyl-CoA dehydrogenase, N-terminal domain - - - - - - - - - - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N WXD2_k127_3374499_7 1047013.AQSP01000100_gene599 1.685e-14 87.0 COG1629@1|root,COG4771@2|Bacteria,2NP6Z@2323|unclassified Bacteria 2|Bacteria P COGs COG1629 Outer membrane receptor protein mostly Fe transport - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - CarbopepD_reg_2,CarboxypepD_reg,Plug,TonB_dep_Rec WXD2_k127_3374499_8 715226.ABI_42080 0.0002144 53.0 COG0457@1|root,COG0457@2|Bacteria,1MVMG@1224|Proteobacteria,2TSGE@28211|Alphaproteobacteria,2KFWV@204458|Caulobacterales 204458|Caulobacterales S Sulfotransferase - - - - - - - - - - - - Sulfotransfer_3,TPR_16,TPR_19,TPR_8 WXD2_k127_3374499_1 1047013.AQSP01000131_gene1840 3.25e-100 353.0 COG0457@1|root,COG3119@1|root,COG0457@2|Bacteria,COG3119@2|Bacteria,2NPK1@2323|unclassified Bacteria 2|Bacteria T Tetratricopeptide repeat - - - - - - - - - - - - Sulfatase,TPR_1,TPR_11,TPR_16,TPR_19,TPR_2,TPR_8 WXD2_k127_3374499_0 1047013.AQSP01000123_gene1525 1.317e-108 377.0 COG0457@1|root,COG3119@1|root,COG0457@2|Bacteria,COG3119@2|Bacteria,2NPK1@2323|unclassified Bacteria 2|Bacteria T Tetratricopeptide repeat - - - - - - - - - - - - Sulfatase,TPR_1,TPR_11,TPR_16,TPR_19,TPR_2,TPR_8 WXD2_k127_3374499_5 595494.Tola_1008 2.073e-27 116.0 COG2832@1|root,COG2832@2|Bacteria,1N7BI@1224|Proteobacteria,1SCJZ@1236|Gammaproteobacteria,1Y4R8@135624|Aeromonadales 135624|Aeromonadales S membrane - - - ko:K09790 - - - - ko00000 - - - DUF454 WXD2_k127_3374499_6 1340493.JNIF01000004_gene618 1.198e-17 98.0 2E93F@1|root,333CD@2|Bacteria,3Y9CR@57723|Acidobacteria 57723|Acidobacteria - - - - - - - - - - - - - - - WXD2_k127_3374499_2 1125863.JAFN01000001_gene557 3.854e-56 204.0 COG0571@1|root,COG0571@2|Bacteria,1MUQ6@1224|Proteobacteria,42MIP@68525|delta/epsilon subdivisions,2WNDB@28221|Deltaproteobacteria 28221|Deltaproteobacteria J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism rnc GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 ko:K03685 ko03008,ko05205,map03008,map05205 - - - ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 - - - Ribonucleas_3_3,dsrm WXD2_k127_3374499_4 671143.DAMO_2529 2.912e-41 167.0 COG4942@1|root,COG4942@2|Bacteria,2NPDY@2323|unclassified Bacteria 2|Bacteria D Peptidase family M23 envC GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - ko:K21471 - - - - ko00000,ko01000,ko01002,ko01011 - - - Peptidase_M23 WXD2_k127_3374499_3 1207063.P24_17503 7.251e-45 180.0 COG0793@1|root,COG0793@2|Bacteria,1MU39@1224|Proteobacteria,2TRW2@28211|Alphaproteobacteria,2JPN0@204441|Rhodospirillales 204441|Rhodospirillales M Belongs to the peptidase S41A family ctpA - 3.4.21.102 ko:K03797 - - - - ko00000,ko01000,ko01002 - - - PDZ,PDZ_2,Peptidase_S41 WXD2_k127_3389583_3 1121920.AUAU01000023_gene2424 1.389e-52 194.0 COG0811@1|root,COG0811@2|Bacteria,3Y2T8@57723|Acidobacteria 57723|Acidobacteria U MotA TolQ ExbB proton channel - - - ko:K03562 ko01120,map01120 - - - ko00000,ko02000 1.A.30.2.2 - - MotA_ExbB WXD2_k127_3389583_9 243231.GSU0027 4.964e-27 116.0 COG0848@1|root,COG0848@2|Bacteria,1MZ6M@1224|Proteobacteria,42U00@68525|delta/epsilon subdivisions,2WQD4@28221|Deltaproteobacteria,43UY9@69541|Desulfuromonadales 28221|Deltaproteobacteria U PFAM Biopolymer transport protein ExbD TolR tolR - - ko:K03560 - - - - ko00000,ko02000 1.A.30.2.2 - - ExbD WXD2_k127_3389583_14 177437.HRM2_30570 5.52e-08 63.0 COG0810@1|root,COG0810@2|Bacteria,1MZ9F@1224|Proteobacteria,42XAV@68525|delta/epsilon subdivisions,2WSJJ@28221|Deltaproteobacteria,2MK1A@213118|Desulfobacterales 28221|Deltaproteobacteria M TonB C terminal - - - ko:K03646,ko:K03832 - - - - ko00000,ko02000 2.C.1.1,2.C.1.2 - - TonB_2 WXD2_k127_3389583_2 1047013.AQSP01000135_gene1613 8.231e-67 252.0 COG0823@1|root,COG0823@2|Bacteria,2NNZC@2323|unclassified Bacteria 2|Bacteria U TolB amino-terminal domain tolB GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019534,GO:0019904,GO:0022857,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901998 - ko:K03641 - - - - ko00000,ko02000 2.C.1.2 - - PD40,TolB_N WXD2_k127_3389583_8 290317.Cpha266_0860 4.856e-36 144.0 COG2885@1|root,COG2885@2|Bacteria,1FEC5@1090|Chlorobi 1090|Chlorobi M PFAM OmpA MotB domain protein - - - ko:K03640 - - - - ko00000,ko02000 2.C.1.2 - - OmpA WXD2_k127_3389583_10 1125863.JAFN01000001_gene3051 1.771e-26 124.0 COG1729@1|root,COG1729@2|Bacteria,1MUSV@1224|Proteobacteria,42P32@68525|delta/epsilon subdivisions,2WM9Q@28221|Deltaproteobacteria 28221|Deltaproteobacteria D Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division cpoB - - - - - - - - - - - TPR_16,TPR_6 WXD2_k127_3389583_13 234267.Acid_1723 2.863e-08 58.0 COG0268@1|root,COG0268@2|Bacteria,3Y5CZ@57723|Acidobacteria 57723|Acidobacteria J Binds directly to 16S ribosomal RNA rpsT - - ko:K02968 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S20p WXD2_k127_3389583_12 1198114.AciX9_2681 4.005e-16 91.0 COG2980@1|root,COG2980@2|Bacteria,3Y4V4@57723|Acidobacteria,2JJKB@204432|Acidobacteriia 204432|Acidobacteriia M Lipopolysaccharide-assembly - - - - - - - - - - - - LptE WXD2_k127_3389583_0 309803.CTN_0519 4.445e-282 904.0 COG0495@1|root,COG0495@2|Bacteria,2GC3Z@200918|Thermotogae 200918|Thermotogae J Belongs to the class-I aminoacyl-tRNA synthetase family leuS GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 ko:K01869 ko00970,map00970 M00359,M00360 R03657 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - Anticodon_1,tRNA-synt_1,tRNA-synt_1_2 WXD2_k127_3389583_16 1267535.KB906767_gene907 2.2e-06 61.0 COG0308@1|root,COG0457@1|root,COG0308@2|Bacteria,COG0457@2|Bacteria 2|Bacteria S peptidyl-tyrosine sulfation - - - - - - - - - - - - Peptidase_M1,TPR_16,TPR_19,TPR_8 WXD2_k127_3389583_7 696281.Desru_3269 1.129e-36 143.0 COG1490@1|root,COG1490@2|Bacteria,1V6GH@1239|Firmicutes,24J90@186801|Clostridia,2626H@186807|Peptococcaceae 186801|Clostridia J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality dtd - - ko:K07560 - - - - ko00000,ko01000,ko03016 - - - Tyr_Deacylase WXD2_k127_3389583_5 1232410.KI421428_gene1074 4.115e-46 170.0 COG0629@1|root,COG0629@2|Bacteria,1RCWT@1224|Proteobacteria,42TV9@68525|delta/epsilon subdivisions,2WNAN@28221|Deltaproteobacteria,43SIE@69541|Desulfuromonadales 28221|Deltaproteobacteria L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism ssb - - ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 - - - ko00000,ko00001,ko03029,ko03032,ko03400 - - - SSB WXD2_k127_3389583_1 264198.Reut_B5210 3.839e-71 246.0 COG1272@1|root,COG1272@2|Bacteria,1PGRH@1224|Proteobacteria,2VJR4@28216|Betaproteobacteria,1K3BF@119060|Burkholderiaceae 28216|Betaproteobacteria S hemolysin III hlyIII - - ko:K11068 - - - - ko00000,ko02042 - - - HlyIII WXD2_k127_3389583_4 1347086.CCBA010000015_gene543 1.898e-49 181.0 COG2318@1|root,COG2318@2|Bacteria,1V6MV@1239|Firmicutes,4HH68@91061|Bacilli,1ZFX8@1386|Bacillus 91061|Bacilli S DinB superfamily - - - - - - - - - - - - DinB_2 WXD2_k127_3389583_11 67267.JNXT01000022_gene1207 1.518e-25 115.0 COG4290@1|root,COG4290@2|Bacteria,2IHPV@201174|Actinobacteria 201174|Actinobacteria F Ribonuclease - - 3.1.27.3 ko:K01167 - - - - ko00000,ko01000,ko03016,ko03019 - - - Ribonuclease WXD2_k127_3389583_15 930166.CD58_03755 2.538e-07 57.0 COG2732@1|root,COG2732@2|Bacteria,1QR1J@1224|Proteobacteria,1SU9D@1236|Gammaproteobacteria 1236|Gammaproteobacteria K Barstar (barnase inhibitor) - - - - - - - - - - - - Barstar WXD2_k127_3389583_6 880073.Calab_3797 1.127e-45 188.0 COG2208@1|root,COG3292@1|root,COG2208@2|Bacteria,COG3292@2|Bacteria,2NNZT@2323|unclassified Bacteria 2|Bacteria T Two component regulator propeller - - - - - - - - - - - - HATPase_c,HisKA,HisKA_2,HisKA_3,PAS_9,Reg_prop,Response_reg,SpoIIE,Y_Y_Y WXD2_k127_3389583_18 1121440.AUMA01000015_gene1848 5.106e-06 60.0 COG2199@1|root,COG4191@1|root,COG2199@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria 1224|Proteobacteria T Histidine kinase - - - - - - - - - - - - DUF3365,GAF_2,GGDEF,HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_8,PAS_9,dCache_1 WXD2_k127_3389631_1 448385.sce3935 1.416e-74 274.0 COG1194@1|root,COG1194@2|Bacteria,1MUD4@1224|Proteobacteria,42PDR@68525|delta/epsilon subdivisions,2WJ60@28221|Deltaproteobacteria,2YURG@29|Myxococcales 28221|Deltaproteobacteria L A G-specific mutY - - ko:K03575 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - EndIII_4Fe-2S,HhH-GPD,NUDIX_4 WXD2_k127_3389631_0 861299.J421_0944 4.992e-95 334.0 COG0484@1|root,COG0484@2|Bacteria 2|Bacteria O heat shock protein binding - - - ko:K05516 - - - - ko00000,ko03036,ko03110 - - - DnaJ,DnaJ_C WXD2_k127_3404890_3 1121920.AUAU01000008_gene1664 1.522e-15 79.0 COG0377@1|root,COG0377@2|Bacteria,3Y475@57723|Acidobacteria 57723|Acidobacteria C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoB - 1.6.5.3 ko:K00331 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q6 WXD2_k127_3404890_1 1232410.KI421413_gene749 9.014e-37 158.0 COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,42M0W@68525|delta/epsilon subdivisions,2WIK8@28221|Deltaproteobacteria,43TXF@69541|Desulfuromonadales 28221|Deltaproteobacteria T Putative diguanylate phosphodiesterase - - - - - - - - - - - - EAL,GGDEF,PAS,PAS_9,Response_reg WXD2_k127_3404890_4 1120948.KB903221_gene391 3.198e-14 87.0 COG0438@1|root,COG0438@2|Bacteria,2HNS7@201174|Actinobacteria,4E77U@85010|Pseudonocardiales 201174|Actinobacteria M transferase activity, transferring glycosyl groups - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 WXD2_k127_3404890_2 1283300.ATXB01000001_gene2332 2.263e-34 152.0 COG2227@1|root,COG2227@2|Bacteria,1NBIU@1224|Proteobacteria 1224|Proteobacteria H PFAM Methyltransferase type - - - - - - - - - - - - Glyco_trans_1_2,Methyltransf_23 WXD2_k127_3404890_5 1121406.JAEX01000016_gene1859 3.592e-10 71.0 COG0535@1|root,COG0535@2|Bacteria,1Q4MX@1224|Proteobacteria,4347G@68525|delta/epsilon subdivisions,2X0T4@28221|Deltaproteobacteria,2MDC6@213115|Desulfovibrionales 28221|Deltaproteobacteria S Iron-sulfur cluster-binding domain - - - - - - - - - - - - Radical_SAM,SPASM WXD2_k127_3404890_0 261292.Nit79A3_0433 1.552e-56 209.0 COG2227@1|root,COG2227@2|Bacteria,1RAW1@1224|Proteobacteria,2WB3M@28216|Betaproteobacteria,37289@32003|Nitrosomonadales 28216|Betaproteobacteria H Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_9 WXD2_k127_3405395_0 589865.DaAHT2_0447 7.287e-132 435.0 COG0147@1|root,COG0147@2|Bacteria,1MVBJ@1224|Proteobacteria,42MXN@68525|delta/epsilon subdivisions,2WJN0@28221|Deltaproteobacteria,2MI03@213118|Desulfobacterales 28221|Deltaproteobacteria EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia trpE - 4.1.3.27 ko:K01657,ko:K13503 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 M00023 R00985,R00986 RC00010,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 - - - Anth_synt_I_N,Chorismate_bind WXD2_k127_3405395_2 240015.ACP_2227 8.137e-30 134.0 COG0169@1|root,COG0710@1|root,COG0169@2|Bacteria,COG0710@2|Bacteria,3Y2Y4@57723|Acidobacteria,2JI8D@204432|Acidobacteriia 204432|Acidobacteriia E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) aroD - 1.1.1.25,4.2.1.10 ko:K13832 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02413,R03084 RC00206,RC00848 ko00000,ko00001,ko00002,ko01000 - - - DHquinase_I,Shikimate_DH,Shikimate_dh_N WXD2_k127_3405395_1 983917.RGE_13370 8.253e-35 145.0 COG2912@1|root,COG2912@2|Bacteria,1MVJQ@1224|Proteobacteria,2VMIR@28216|Betaproteobacteria,1KKIU@119065|unclassified Burkholderiales 28216|Betaproteobacteria S Transglutaminase-like superfamily - - - - - - - - - - - - TPR_9,Transglut_core2 WXD2_k127_3418537_2 1237149.C900_04559 9.113e-14 78.0 COG0745@1|root,COG0745@2|Bacteria,4NIQC@976|Bacteroidetes,47PDQ@768503|Cytophagia 976|Bacteroidetes T Transcriptional regulatory protein, C terminal - - - - - - - - - - - - Response_reg,Trans_reg_C WXD2_k127_3418537_1 1267533.KB906733_gene2989 3.95e-68 263.0 COG0642@1|root,COG2205@2|Bacteria,3Y2M7@57723|Acidobacteria 57723|Acidobacteria T Histidine kinase - - - - - - - - - - - - HATPase_c,HisKA WXD2_k127_3418537_0 452637.Oter_1515 5.28e-106 357.0 COG0845@1|root,COG0845@2|Bacteria,46UZZ@74201|Verrucomicrobia 74201|Verrucomicrobia M Biotin-lipoyl like - - - - - - - - - - - - HlyD_D23 WXD2_k127_3452030_3 1121920.AUAU01000015_gene1127 1.02e-68 259.0 COG2385@1|root,COG2385@2|Bacteria,3Y370@57723|Acidobacteria 57723|Acidobacteria D Stage II sporulation protein - - - ko:K06381 - - - - ko00000 - - - SPOR,SpoIID WXD2_k127_3452030_7 525904.Tter_1427 1.64e-12 74.0 COG1716@1|root,COG1716@2|Bacteria,2NQ4X@2323|unclassified Bacteria 2|Bacteria T Inner membrane component of T3SS, cytoplasmic domain - - - - - - - - - - - - DUF3662,FHA,Yop-YscD_cpl WXD2_k127_3452030_6 391589.RGAI101_3285 1.31e-15 83.0 COG0745@1|root,COG0745@2|Bacteria,1MY2Z@1224|Proteobacteria,2TRFZ@28211|Alphaproteobacteria,2P1JH@2433|Roseobacter 28211|Alphaproteobacteria K COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain phoB - - ko:K07657 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C WXD2_k127_3452030_4 574087.Acear_0893 1.31e-64 225.0 COG2065@1|root,COG2065@2|Bacteria,1V3GV@1239|Firmicutes,24FQD@186801|Clostridia,3WAIW@53433|Halanaerobiales 186801|Clostridia F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant pyrR - 2.4.2.9 ko:K02825 ko00240,ko01100,map00240,map01100 - R00966 RC00063 ko00000,ko00001,ko01000,ko03000 - - iHN637.CLJU_RS05275 Pribosyltran WXD2_k127_3452030_1 1121468.AUBR01000026_gene2951 8.717e-107 354.0 COG0540@1|root,COG0540@2|Bacteria,1TQ96@1239|Firmicutes,2496D@186801|Clostridia,42EY2@68295|Thermoanaerobacterales 186801|Clostridia F Belongs to the ATCase OTCase family pyrB - 2.1.3.2 ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R01397 RC00064,RC02850 ko00000,ko00001,ko00002,ko01000 - - - OTCace,OTCace_N WXD2_k127_3452030_0 404380.Gbem_1897 3.332e-138 454.0 COG0044@1|root,COG0044@2|Bacteria,1MVXY@1224|Proteobacteria,42MJ9@68525|delta/epsilon subdivisions,2WJH8@28221|Deltaproteobacteria,43TM6@69541|Desulfuromonadales 28221|Deltaproteobacteria F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily pyrC GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 ko:K01465 ko00240,ko01100,map00240,map01100 M00051 R01993 RC00632 ko00000,ko00001,ko00002,ko01000 - - - Amidohydro_1 WXD2_k127_3452030_5 316067.Geob_2909 3.302e-21 98.0 COG0745@1|root,COG0745@2|Bacteria,1N0WF@1224|Proteobacteria,42TTF@68525|delta/epsilon subdivisions,2WR69@28221|Deltaproteobacteria,43SMH@69541|Desulfuromonadales 28221|Deltaproteobacteria T Response regulator receiver domain - - - - - - - - - - - - Response_reg WXD2_k127_3452030_2 1297742.A176_04116 4.515e-99 340.0 COG2805@1|root,COG2805@2|Bacteria,1MU3J@1224|Proteobacteria,42M7F@68525|delta/epsilon subdivisions,2WJ28@28221|Deltaproteobacteria,2YWA0@29|Myxococcales 28221|Deltaproteobacteria NU Type II/IV secretion system protein pilT-1 - - ko:K02669 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - T2SSE WXD2_k127_3457557_0 215803.DB30_5064 3.948e-234 775.0 COG0457@1|root,COG1305@1|root,COG0457@2|Bacteria,COG1305@2|Bacteria,1Q712@1224|Proteobacteria,433SV@68525|delta/epsilon subdivisions,2WYAY@28221|Deltaproteobacteria,2YXT0@29|Myxococcales 28221|Deltaproteobacteria E Domain of Unknown Function with PDB structure (DUF3857) - - - - - - - - - - - - DUF3857,Transglut_core WXD2_k127_3457557_3 1121920.AUAU01000004_gene667 8.947e-59 220.0 COG0577@1|root,COG0577@2|Bacteria,3Y3XI@57723|Acidobacteria 2|Bacteria V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD WXD2_k127_3457557_4 459349.CLOAM1897 3.501e-58 218.0 COG0577@1|root,COG0577@2|Bacteria 2|Bacteria V efflux transmembrane transporter activity - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD WXD2_k127_3457557_2 497964.CfE428DRAFT_5400 6.272e-85 289.0 COG1136@1|root,COG1136@2|Bacteria 2|Bacteria V lipoprotein transporter activity macB - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran WXD2_k127_3457557_1 1121920.AUAU01000004_gene664 2.144e-85 301.0 COG0845@1|root,COG0845@2|Bacteria 2|Bacteria M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K02005,ko:K13888 - M00709 - - ko00000,ko00002,ko02000 8.A.1 - - Biotin_lipoyl_2,HlyD_D23 WXD2_k127_3480485_9 1122135.KB893169_gene2467 0.0005913 44.0 COG0492@1|root,COG0492@2|Bacteria,1MXI0@1224|Proteobacteria,2TUAR@28211|Alphaproteobacteria 28211|Alphaproteobacteria O Pyridine nucleotide-disulphide oxidoreductase - - - - - - - - - - - - DAO,NAD_binding_8,Pyr_redox_3 WXD2_k127_3480485_8 1122137.AQXF01000001_gene3422 3.365e-07 59.0 2BVWF@1|root,345UK@2|Bacteria,1P06N@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - WXD2_k127_3480485_2 1349767.GJA_154 2.404e-125 419.0 COG4615@1|root,COG4615@2|Bacteria,1MVIC@1224|Proteobacteria,2VJPD@28216|Betaproteobacteria 28216|Betaproteobacteria PQ Cyclic peptide transporter - - - ko:K06160 ko02010,map02010 - - - ko00000,ko00001,ko02000 3.A.1.113.2 - - ABC_tran WXD2_k127_3480485_5 1238182.C882_0267 4.576e-65 237.0 COG0330@1|root,COG0330@2|Bacteria,1RDFI@1224|Proteobacteria,2U1E0@28211|Alphaproteobacteria,2JQZH@204441|Rhodospirillales 204441|Rhodospirillales O COG0330 Membrane protease subunits, stomatin prohibitin homologs - - - - - - - - - - - - Band_7 WXD2_k127_3480485_7 697282.Mettu_3711 1.816e-21 108.0 COG3251@1|root,COG3251@2|Bacteria,1N87J@1224|Proteobacteria 1224|Proteobacteria S PFAM MbtH domain protein - - - - - - - - - - - - MbtH WXD2_k127_3480485_6 1052684.PPM_2180 2.599e-62 226.0 COG3208@1|root,COG3208@2|Bacteria,1V3KR@1239|Firmicutes,4HHC8@91061|Bacilli,26XR6@186822|Paenibacillaceae 91061|Bacilli Q thioesterase involved in non-ribosomal peptide biosynthesis - - - - - - - - - - - - Thioesterase WXD2_k127_3480485_3 533240.CRC_01130 1.674e-86 294.0 COG1028@1|root,COG1028@2|Bacteria,1G0MD@1117|Cyanobacteria,1HQVX@1161|Nostocales 1117|Cyanobacteria IQ Enoyl-(Acyl carrier protein) reductase - - 1.1.1.100 ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short_C2 WXD2_k127_3480485_4 46234.ANA_C13067 2.543e-66 247.0 COG3774@1|root,COG3774@2|Bacteria,1GJ9D@1117|Cyanobacteria,1HR4I@1161|Nostocales 1117|Cyanobacteria M Glycosyltransferase sugar-binding region containing DXD motif - - - - - - - - - - - - Gly_transf_sug WXD2_k127_3480485_0 63737.Npun_R2083 1.296e-299 961.0 COG0236@1|root,COG0318@1|root,COG1960@1|root,COG0236@2|Bacteria,COG0318@2|Bacteria,COG1960@2|Bacteria,1G4CE@1117|Cyanobacteria,1HJ2S@1161|Nostocales 1117|Cyanobacteria IQ AMP-dependent synthetase and ligase - - - - - - - - - - - - AMP-binding,Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N,PP-binding WXD2_k127_3480485_1 240292.Ava_3985 1.162e-252 809.0 COG3321@1|root,COG3321@2|Bacteria,1FZXE@1117|Cyanobacteria,1HJCN@1161|Nostocales 1117|Cyanobacteria IQ Acyl transferase domain in polyketide synthase (PKS) enzymes. - - - - - - - - - - - - ADH_N,ADH_zinc_N,ADH_zinc_N_2,AMP-binding,Acyl_transf_1,Aminotran_1_2,KAsynt_C_assoc,KR,Ketoacyl-synt_C,Methyltransf_12,PP-binding,PS-DH,ketoacyl-synt WXD2_k127_3481942_4 1047013.AQSP01000083_gene1193 1.679e-18 100.0 COG0308@1|root,COG0308@2|Bacteria,2NPGQ@2323|unclassified Bacteria 2|Bacteria E aminopeptidase - - - - - - - - - - - - BPD_transp_1,PD40,Peptidase_M1 WXD2_k127_3481942_5 204669.Acid345_2736 2.981e-16 88.0 COG1592@1|root,COG1592@2|Bacteria,3Y5YA@57723|Acidobacteria,2JK5H@204432|Acidobacteriia 204432|Acidobacteriia C Rubrerythrin - - - - - - - - - - - - Rubrerythrin WXD2_k127_3481942_0 1120963.KB894512_gene2481 8.398e-140 459.0 COG0006@1|root,COG0006@2|Bacteria,1MURT@1224|Proteobacteria,1RMKT@1236|Gammaproteobacteria,2Q1AR@267888|Pseudoalteromonadaceae 1236|Gammaproteobacteria E Splits dipeptides with a prolyl residue in the C- terminal position pepQ GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009056,GO:0009987,GO:0016787,GO:0016805,GO:0019538,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0070573,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.13.9 ko:K01271 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M24 WXD2_k127_3481942_3 153721.MYP_122 8.91e-27 115.0 arCOG13559@1|root,33239@2|Bacteria 2|Bacteria S Protein of unknown function (DUF2721) - - - - - - - - - - - - DUF2721 WXD2_k127_3481942_1 1385517.N800_00925 3.413e-66 241.0 COG0730@1|root,COG0730@2|Bacteria,1PGTZ@1224|Proteobacteria,1RPMM@1236|Gammaproteobacteria,1X5WN@135614|Xanthomonadales 135614|Xanthomonadales S membrane transporter protein - - - ko:K07090 - - - - ko00000 - - - TauE WXD2_k127_3481942_2 1254432.SCE1572_16740 1.136e-53 194.0 COG1573@1|root,COG1573@2|Bacteria,1Q2FJ@1224|Proteobacteria,43F3W@68525|delta/epsilon subdivisions,2X3BI@28221|Deltaproteobacteria,2YV9I@29|Myxococcales 28221|Deltaproteobacteria L Uracil DNA glycosylase superfamily - - 3.2.2.27 ko:K03648 ko03410,ko05340,map03410,map05340 - - - ko00000,ko00001,ko01000,ko03400 - - - UDG WXD2_k127_3483352_0 1125863.JAFN01000001_gene2065 1.939e-59 219.0 COG2199@1|root,COG3706@2|Bacteria,1R7HC@1224|Proteobacteria,42M4Q@68525|delta/epsilon subdivisions,2X5DU@28221|Deltaproteobacteria 28221|Deltaproteobacteria T Diguanylate cyclase - - - - - - - - - - - iAF987.Gmet_0069 GGDEF,Response_reg WXD2_k127_3483352_1 880073.Calab_2196 4.574e-49 191.0 COG1271@1|root,COG1271@2|Bacteria 2|Bacteria C aerobic electron transport chain - - 1.10.3.14 ko:K00425,ko:K08738 ko00190,ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00190,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416 M00153,M00595 R10151,R11325 RC00061,RC03151,RC03152 ko00000,ko00001,ko00002,ko01000 3.D.4.3,3.D.4.6 - - Cyt_bd_oxida_I WXD2_k127_3493861_2 269799.Gmet_0933 2.33e-36 161.0 COG2304@1|root,COG2373@1|root,COG3391@1|root,COG2304@2|Bacteria,COG2373@2|Bacteria,COG3391@2|Bacteria,1QU09@1224|Proteobacteria 1224|Proteobacteria M regulator of chromosome condensation, RCC1 - - - ko:K20276 ko02024,map02024 - - - ko00000,ko00001 - - - Big_3_2,Cadherin,He_PIG,RHS_repeat WXD2_k127_3493861_0 1379698.RBG1_1C00001G1351 1.331e-119 395.0 COG0683@1|root,COG0683@2|Bacteria,2NPSN@2323|unclassified Bacteria 2|Bacteria E Receptor family ligand binding region livJ - - ko:K01999 ko02010,ko02024,map02010,map02024 M00237 - - ko00000,ko00001,ko00002,ko02000 3.A.1.4 - - Peripla_BP_6 WXD2_k127_3493861_1 379066.GAU_2111 8.957e-65 229.0 COG0231@1|root,COG0231@2|Bacteria,1ZT2N@142182|Gemmatimonadetes 142182|Gemmatimonadetes J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase efp - - ko:K02356 - - - - ko00000,ko03012 - - - EFP,EFP_N,Elong-fact-P_C WXD2_k127_3493861_3 862908.BMS_3186 3.41e-12 77.0 2EC0X@1|root,33605@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_3496360_1 748247.AZKH_1490 1.863e-106 354.0 COG1680@1|root,COG3876@1|root,COG1680@2|Bacteria,COG3876@2|Bacteria,1MX3S@1224|Proteobacteria,2VMMF@28216|Betaproteobacteria,2KXTY@206389|Rhodocyclales 206389|Rhodocyclales V Beta-lactamase - - - - - - - - - - - - Beta-lactamase,DUF1343 WXD2_k127_3496360_0 1254432.SCE1572_31930 3.375e-164 554.0 COG0515@1|root,COG3903@1|root,COG0515@2|Bacteria,COG3903@2|Bacteria,1MWPD@1224|Proteobacteria,4389V@68525|delta/epsilon subdivisions,2X3J8@28221|Deltaproteobacteria,2YWAY@29|Myxococcales 28221|Deltaproteobacteria KLT Transcriptional regulator - - - - - - - - - - - - Pkinase WXD2_k127_3496360_2 204669.Acid345_1498 1.714e-51 191.0 COG0664@1|root,COG0664@2|Bacteria,3Y4IX@57723|Acidobacteria,2JJ9U@204432|Acidobacteriia 204432|Acidobacteriia K cyclic nucleotide-binding - - - ko:K01420,ko:K10914 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 - - - ko00000,ko00001,ko03000 - - - HTH_Crp_2,cNMP_binding WXD2_k127_3496360_3 1254432.SCE1572_23370 1.951e-30 122.0 COG2223@1|root,COG2223@2|Bacteria 2|Bacteria P nitrite transmembrane transporter activity - - - - - - - - - - - - - WXD2_k127_3498680_0 378806.STAUR_7858 5.412e-92 305.0 COG1896@1|root,COG1896@2|Bacteria,1MXEZ@1224|Proteobacteria,42SK8@68525|delta/epsilon subdivisions,2WPU3@28221|Deltaproteobacteria 28221|Deltaproteobacteria S HD domain - - - ko:K07023 - - - - ko00000 - - - HD_3 WXD2_k127_3498680_1 460265.Mnod_0780 3.254e-21 102.0 COG1032@1|root,COG1032@2|Bacteria,1MWR0@1224|Proteobacteria,2TUPK@28211|Alphaproteobacteria,1JQSP@119045|Methylobacteriaceae 28211|Alphaproteobacteria C SMART Elongator protein 3 MiaB NifB bchE - 1.21.98.3 ko:K04034 ko00860,ko01100,ko01110,map00860,map01100,map01110 - R06268,R06269,R06270 RC00741,RC01491,RC01492 ko00000,ko00001,ko01000 - - - B12-binding,Radical_SAM WXD2_k127_3500260_0 483219.LILAB_19140 0.0 1077.0 COG0339@1|root,COG0339@2|Bacteria,1MU1K@1224|Proteobacteria,42MUY@68525|delta/epsilon subdivisions,2X6WF@28221|Deltaproteobacteria,2YWNJ@29|Myxococcales 28221|Deltaproteobacteria E Peptidase family M3 dcp - 3.4.15.5 ko:K01284 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M3 WXD2_k127_3500260_3 247634.GPB2148_511 1.135e-43 171.0 COG0697@1|root,COG0697@2|Bacteria,1PIF5@1224|Proteobacteria,1SXXQ@1236|Gammaproteobacteria,1JBPU@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria EG EamA-like transporter family - - - - - - - - - - - - EamA WXD2_k127_3500260_1 1121920.AUAU01000006_gene250 6.813e-265 824.0 COG0531@1|root,COG0531@2|Bacteria,3Y3SZ@57723|Acidobacteria 57723|Acidobacteria E amino acid - - - ko:K03294 - - - - ko00000 2.A.3.2 - - AA_permease_2 WXD2_k127_3500260_2 1116232.AHBF01000066_gene8761 6.877e-103 345.0 COG2008@1|root,COG2008@2|Bacteria,2IBCJ@201174|Actinobacteria 201174|Actinobacteria E Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde - - 4.1.2.48 ko:K01620 ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230 - R00751,R06171 RC00312,RC00372 ko00000,ko00001,ko01000 - - - Beta_elim_lyase WXD2_k127_3508945_1 379066.GAU_3583 3.698e-89 311.0 COG0076@1|root,COG0076@2|Bacteria,1ZTFP@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Pyridoxal-dependent decarboxylase conserved domain - - 4.1.1.86 ko:K13745 ko00260,ko01120,map00260,map01120 - R07650 RC00299 ko00000,ko00001,ko01000 - - - Pyridoxal_deC WXD2_k127_3508945_2 269799.Gmet_1369 6.333e-44 169.0 COG0565@1|root,COG0565@2|Bacteria,1N47Y@1224|Proteobacteria,42S9X@68525|delta/epsilon subdivisions,2WNTZ@28221|Deltaproteobacteria,43SI1@69541|Desulfuromonadales 28221|Deltaproteobacteria J Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA trmJ - - ko:K02533 - - - - ko00000,ko01000,ko03016 - - - SpoU_methylase WXD2_k127_3508945_3 1254432.SCE1572_48280 8.044e-16 83.0 COG0784@1|root,COG0784@2|Bacteria,1QAM7@1224|Proteobacteria,43563@68525|delta/epsilon subdivisions,2WZH3@28221|Deltaproteobacteria,2Z24X@29|Myxococcales 28221|Deltaproteobacteria T Domain of unknown function (DUF4388) - - - - - - - - - - - - DUF4388,Response_reg WXD2_k127_3508945_0 1267580.AF6_0221 2.717e-95 323.0 COG0272@1|root,COG0272@2|Bacteria,1TPQ3@1239|Firmicutes,4HA1D@91061|Bacilli,21V85@150247|Anoxybacillus 91061|Bacilli L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA ligA GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 - R00382 RC00005 ko00000,ko00001,ko01000,ko03032,ko03400 - - - BRCT,DNA_ligase_OB,DNA_ligase_ZBD,DNA_ligase_aden,HHH_2,HHH_5 WXD2_k127_3535259_4 1397666.RS24_01174 5.861e-19 93.0 2F81H@1|root,340EZ@2|Bacteria,1N5WY@1224|Proteobacteria,2UEF2@28211|Alphaproteobacteria 28211|Alphaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_3535259_3 517722.AEUE01000002_gene2290 4.475e-26 110.0 COG3655@1|root,COG3655@2|Bacteria,1N6VH@1224|Proteobacteria,2UF2T@28211|Alphaproteobacteria,2K65Y@204457|Sphingomonadales 204457|Sphingomonadales K Cro/C1-type HTH DNA-binding domain - - - ko:K07727 - - - - ko00000,ko03000 - - - HTH_26 WXD2_k127_3535259_2 861299.J421_5889 2.822e-33 135.0 2DSP1@1|root,33GVU@2|Bacteria 2|Bacteria S Protein of unknown function (DUF2975) - - - - - - - - - - - - DUF2975 WXD2_k127_3535259_0 196490.AUEZ01000193_gene4368 2.682e-84 301.0 COG5654@1|root,COG5654@2|Bacteria,1N277@1224|Proteobacteria,2TSEV@28211|Alphaproteobacteria 28211|Alphaproteobacteria S RES - - - - - - - - - - - - RES WXD2_k127_3535259_1 1382359.JIAL01000001_gene15 2.201e-59 209.0 COG5606@1|root,COG5606@2|Bacteria,3Y8EJ@57723|Acidobacteria,2JNJH@204432|Acidobacteriia 204432|Acidobacteriia S Protein of unknown function (DUF2384) - - - - - - - - - - - - DUF2384 WXD2_k127_355644_0 1340493.JNIF01000003_gene3464 0.0001663 49.0 COG1629@1|root,COG4771@2|Bacteria,3Y77Q@57723|Acidobacteria 57723|Acidobacteria P TonB dependent receptor - - - - - - - - - - - - CarboxypepD_reg,Plug,TonB_dep_Rec WXD2_k127_3581355_0 1167006.UWK_02223 3.193e-124 415.0 COG0773@1|root,COG0773@2|Bacteria,1MUC5@1224|Proteobacteria,42NMY@68525|delta/epsilon subdivisions,2WJ8S@28221|Deltaproteobacteria,2MHS5@213118|Desulfobacterales 28221|Deltaproteobacteria M Belongs to the MurCDEF family mpl - 6.3.2.45 ko:K02558 - - - - ko00000,ko01000 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M WXD2_k127_3581355_1 243231.GSU2713 2.649e-19 104.0 2CG1Y@1|root,32WID@2|Bacteria,1N01A@1224|Proteobacteria,42UK0@68525|delta/epsilon subdivisions,2WQED@28221|Deltaproteobacteria,43SMQ@69541|Desulfuromonadales 28221|Deltaproteobacteria S Protein of unknown function (DUF1573) - - - - - - - - - - - - DUF1573,PapD-like WXD2_k127_3594464_2 867845.KI911784_gene1260 2.969e-114 392.0 COG0823@1|root,COG1520@1|root,COG0823@2|Bacteria,COG1520@2|Bacteria 2|Bacteria S amino acid activation for nonribosomal peptide biosynthetic process - - - ko:K03641,ko:K20276 ko02024,map02024 - - - ko00000,ko00001,ko02000 2.C.1.2 - - DUF11,HYR,PD40,PQQ_2,VCBS WXD2_k127_3594464_0 29581.BW37_00870 0.0 1334.0 COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,1MX41@1224|Proteobacteria,2WBDI@28216|Betaproteobacteria,475K6@75682|Oxalobacteraceae 28216|Betaproteobacteria M Tricorn protease homolog - - - - - - - - - - - - PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ WXD2_k127_3594464_3 395495.Lcho_0047 1.083e-53 217.0 COG0642@1|root,COG3850@1|root,COG2205@2|Bacteria,COG3850@2|Bacteria,1N58A@1224|Proteobacteria,2VHVP@28216|Betaproteobacteria,1KN51@119065|unclassified Burkholderiales 28216|Betaproteobacteria T Histidine kinase yfhK - 2.7.13.3 ko:K07711 ko02020,ko02024,map02020,map02024 M00502 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HAMP,HATPase_c,HisKA WXD2_k127_3594464_1 1384056.N787_02170 1.286e-134 469.0 COG2199@1|root,COG3292@1|root,COG3292@2|Bacteria,COG3706@2|Bacteria,1R7HC@1224|Proteobacteria,1RQCR@1236|Gammaproteobacteria,1X4SZ@135614|Xanthomonadales 135614|Xanthomonadales T diguanylate cyclase - - - - - - - - - - - - GGDEF,Reg_prop,Y_Y_Y WXD2_k127_3594464_4 1515613.HQ37_06570 2.812e-36 141.0 COG1091@1|root,COG1091@2|Bacteria,4NE3K@976|Bacteroidetes,2FN7H@200643|Bacteroidia,22WWK@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose rfbD - 1.1.1.133 ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R02777 RC00182 ko00000,ko00001,ko00002,ko01000 - - - RmlD_sub_bind WXD2_k127_362034_0 1238182.C882_2913 1.058e-70 246.0 COG1611@1|root,COG1611@2|Bacteria,1RD59@1224|Proteobacteria,2U5DP@28211|Alphaproteobacteria,2JSHV@204441|Rhodospirillales 204441|Rhodospirillales S Belongs to the LOG family - - 3.2.2.10 ko:K06966 ko00230,ko00240,map00230,map00240 - R00182,R00510 RC00063,RC00318 ko00000,ko00001,ko01000 - - - Lysine_decarbox WXD2_k127_3623079_7 309807.SRU_1737 4.156e-18 94.0 COG0589@1|root,COG0589@2|Bacteria,4NFZ5@976|Bacteroidetes,1FJR9@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes T Belongs to the universal stress protein A family - - - - - - - - - - - - Usp WXD2_k127_3623079_3 443144.GM21_1031 1.308e-84 291.0 COG1105@1|root,COG1105@2|Bacteria,1MVNW@1224|Proteobacteria,42U95@68525|delta/epsilon subdivisions,2WQWB@28221|Deltaproteobacteria 28221|Deltaproteobacteria H belongs to the carbohydrate kinase PfkB family - - 2.7.1.11 ko:K16370 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00345 R00756,R03236,R03237,R03238,R03239,R04779 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - PfkB WXD2_k127_3623079_1 290397.Adeh_4242 1.569e-151 492.0 COG1502@1|root,COG1502@2|Bacteria,1MWUW@1224|Proteobacteria,42PV9@68525|delta/epsilon subdivisions,2WKF2@28221|Deltaproteobacteria,2YWP2@29|Myxococcales 28221|Deltaproteobacteria I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol clsA - - ko:K06131 ko00564,ko01100,map00564,map01100 - R07390 RC00017 ko00000,ko00001,ko01000 - - - PLDc_2,PLDc_N WXD2_k127_3623079_0 215803.DB30_2832 1.06e-200 640.0 COG1719@1|root,COG3829@1|root,COG1719@2|Bacteria,COG3829@2|Bacteria,1NU8B@1224|Proteobacteria,42M2E@68525|delta/epsilon subdivisions,2WKAB@28221|Deltaproteobacteria,2YWDZ@29|Myxococcales 28221|Deltaproteobacteria K Transcriptional regulator, Fis family - - - - - - - - - - - - HTH_8,Sigma54_activat,V4R,XylR_N WXD2_k127_3623079_6 926550.CLDAP_17320 2.177e-24 108.0 COG2259@1|root,COG2259@2|Bacteria 2|Bacteria S methylamine metabolic process doxX - 1.6.99.3 ko:K03885,ko:K15977 ko00190,map00190 - - - ko00000,ko00001,ko01000 - - - DoxX WXD2_k127_3623079_4 1499967.BAYZ01000163_gene6587 2.319e-33 138.0 COG0782@1|root,COG0782@2|Bacteria 2|Bacteria K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus rnk - - ko:K03624,ko:K06140 - - - - ko00000,ko03000,ko03021 - - - Acetyltransf_3,GreA_GreB,Rnk_N WXD2_k127_3623079_5 330214.NIDE1927 2.106e-26 121.0 COG0589@1|root,COG0589@2|Bacteria,3J1A7@40117|Nitrospirae 40117|Nitrospirae T Belongs to the universal stress protein A family - - - - - - - - - - - - Usp WXD2_k127_3623079_2 1191523.MROS_2800 4.444e-126 408.0 COG0334@1|root,COG0334@2|Bacteria 2|Bacteria E glutamate dehydrogenase [NAD(P)+] activity gluD GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.2,1.4.1.3,1.4.1.4 ko:K00260,ko:K00261,ko:K00262 ko00220,ko00250,ko00430,ko00471,ko00910,ko01100,ko01200,ko04217,ko04964,map00220,map00250,map00430,map00471,map00910,map01100,map01200,map04217,map04964 M00740 R00243,R00248 RC00006,RC02799 ko00000,ko00001,ko00002,ko01000,ko04147 - - iJN678.gdhA ELFV_dehydrog,ELFV_dehydrog_N WXD2_k127_3628409_4 215803.DB30_5624 6.982e-132 425.0 COG0044@1|root,COG0044@2|Bacteria,1MW10@1224|Proteobacteria,42PXH@68525|delta/epsilon subdivisions,2WKEX@28221|Deltaproteobacteria,2YTWX@29|Myxococcales 28221|Deltaproteobacteria F Amidohydrolase family - - 3.5.2.2 ko:K01464 ko00240,ko00410,ko00770,ko00983,ko01100,map00240,map00410,map00770,map00983,map01100 M00046 R02269,R03055,R08227 RC00632,RC00680 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Amidohydro_1 WXD2_k127_3628409_15 1267534.KB906754_gene3585 6.326e-12 76.0 COG0457@1|root,COG3710@1|root,COG5616@1|root,COG0457@2|Bacteria,COG3710@2|Bacteria,COG5616@2|Bacteria,3Y2HR@57723|Acidobacteria,2JI02@204432|Acidobacteriia 204432|Acidobacteriia KLT Tetratricopeptide repeats - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase,TPR_11,TPR_16,TPR_2,Trans_reg_C WXD2_k127_3628409_16 263358.VAB18032_29481 1.539e-11 74.0 COG1716@1|root,COG1716@2|Bacteria,2GYEE@201174|Actinobacteria,4DJPZ@85008|Micromonosporales 201174|Actinobacteria T Forkhead associated domain - - - - - - - - - - - - Yop-YscD_cpl WXD2_k127_3628409_13 1267535.KB906767_gene1129 6.602e-16 91.0 COG0515@1|root,COG0515@2|Bacteria,3Y4IC@57723|Acidobacteria,2JJ7M@204432|Acidobacteriia 204432|Acidobacteriia KLT Protein kinase domain - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase WXD2_k127_3628409_7 234267.Acid_0585 2.971e-79 290.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria 2|Bacteria U Involved in the tonB-independent uptake of proteins - - 2.7.11.1 ko:K08884,ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PD40,Pkinase,WD40 WXD2_k127_3628409_3 234267.Acid_7663 2.886e-146 467.0 COG0388@1|root,COG0388@2|Bacteria,3Y2T9@57723|Acidobacteria 57723|Acidobacteria S PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - 3.5.1.6 ko:K01431 ko00240,ko00410,ko00770,ko00983,ko01100,map00240,map00410,map00770,map00983,map01100 M00046 R00905,R04666,R08228 RC00096 ko00000,ko00001,ko00002,ko01000 - - - CN_hydrolase WXD2_k127_3628409_9 926560.KE387023_gene2884 2.233e-68 238.0 COG2318@1|root,COG2318@2|Bacteria,1WMM8@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S Mycothiol maleylpyruvate isomerase N-terminal domain - - - - - - - - - - - - DinB_2 WXD2_k127_3628409_12 445335.CBN_1053 6.518e-35 149.0 COG0454@1|root,COG0456@2|Bacteria,1TYX1@1239|Firmicutes,24BZP@186801|Clostridia,36HC7@31979|Clostridiaceae 186801|Clostridia K Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_1,Acetyltransf_10 WXD2_k127_3628409_14 1157490.EL26_20985 3.813e-13 75.0 COG0745@1|root,COG0745@2|Bacteria,1VAYR@1239|Firmicutes,4HKT2@91061|Bacilli 91061|Bacilli KT Histidine kinase - - - - - - - - - - - - Response_reg WXD2_k127_3628409_2 204669.Acid345_2412 1.566e-166 541.0 COG0642@1|root,COG0784@1|root,COG2172@1|root,COG0784@2|Bacteria,COG2172@2|Bacteria,COG2205@2|Bacteria,3Y30Z@57723|Acidobacteria,2JIHG@204432|Acidobacteriia 204432|Acidobacteriia T response regulator, receiver - - - - - - - - - - - - HATPase_c,HisKA,Response_reg WXD2_k127_3628409_8 179408.Osc7112_4130 5.295e-79 276.0 COG2172@1|root,COG2208@1|root,COG2172@2|Bacteria,COG2208@2|Bacteria,1G02S@1117|Cyanobacteria,1H8SM@1150|Oscillatoriales 1117|Cyanobacteria KT Stage II sporulation protein E - - - - - - - - - - - - HATPase_c_2,SpoIIE WXD2_k127_3628409_11 204669.Acid345_2414 8.499e-48 175.0 COG2172@1|root,COG2172@2|Bacteria,3Y4Y8@57723|Acidobacteria,2JJTJ@204432|Acidobacteriia 204432|Acidobacteriia T Histidine kinase-like ATPase domain - - 2.7.11.1 ko:K17752 - - - - ko00000,ko01000,ko01001,ko03021 - - - HATPase_c WXD2_k127_3628409_10 1500897.JQNA01000002_gene2769 3.473e-48 176.0 COG1366@1|root,COG1366@2|Bacteria,1RJM8@1224|Proteobacteria,2VT28@28216|Betaproteobacteria,1K7XA@119060|Burkholderiaceae 28216|Betaproteobacteria T PFAM Sulfate transporter antisigma-factor antagonist STAS rsbS - - ko:K17762 - - - - ko00000,ko03021 - - - STAS WXD2_k127_3628409_6 497965.Cyan7822_1258 2.55e-94 317.0 COG1366@1|root,COG1366@2|Bacteria,1G1ZX@1117|Cyanobacteria,3KJME@43988|Cyanothece 1117|Cyanobacteria T PFAM Sulfate transporter antisigma-factor antagonist STAS - - - ko:K17763 - - - - ko00000,ko03021 - - - Protoglobin,RsbRD_N,STAS WXD2_k127_3628409_0 1521187.JPIM01000008_gene2107 3.051e-276 871.0 COG1449@1|root,COG1449@2|Bacteria,2G5XB@200795|Chloroflexi,3768X@32061|Chloroflexia 32061|Chloroflexia G Belongs to the glycosyl hydrolase 57 family - - - - - - - - - - - - DUF3536,Glyco_hydro_57 WXD2_k127_3628409_1 867845.KI911784_gene3647 3.698e-172 561.0 COG1640@1|root,COG1640@2|Bacteria,2G668@200795|Chloroflexi,376Q1@32061|Chloroflexia 32061|Chloroflexia G PFAM glycoside hydrolase, family 77 - - 2.4.1.25 ko:K00705 ko00500,ko01100,map00500,map01100 - R05196 RC00049 ko00000,ko00001,ko01000 - GH77 - Glyco_hydro_77 WXD2_k127_3628409_5 760568.Desku_2854 6.715e-116 387.0 COG3280@1|root,COG3280@2|Bacteria,1USD2@1239|Firmicutes,25ACB@186801|Clostridia,264MA@186807|Peptococcaceae 186801|Clostridia G Alpha amylase, catalytic domain - - 5.4.99.15 ko:K06044 ko00500,ko01100,ko01110,map00500,map01100,map01110 M00565 R01824,R09995 - ko00000,ko00001,ko00002,ko01000 - GH13 - Alpha-amylase WXD2_k127_3636393_2 1382359.JIAL01000001_gene2863 6.485e-46 169.0 COG0466@1|root,COG0466@2|Bacteria,3Y3DI@57723|Acidobacteria,2JIB4@204432|Acidobacteriia 204432|Acidobacteriia O ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner - - 3.4.21.53 ko:K01338 ko04112,map04112 - - - ko00000,ko00001,ko01000,ko01002 - - - AAA,LON_substr_bdg,Lon_C WXD2_k127_3636393_1 1391647.AVSV01000003_gene1644 1.277e-49 185.0 COG0218@1|root,COG0218@2|Bacteria,1TSPW@1239|Firmicutes,24836@186801|Clostridia,36EDR@31979|Clostridiaceae 186801|Clostridia D Necessary for normal cell division and for the maintenance of normal septation engB - - ko:K03978 - - - - ko00000,ko03036 - - - MMR_HSR1 WXD2_k127_3636393_0 1184267.A11Q_77 8.552e-177 566.0 COG1158@1|root,COG1158@2|Bacteria,1MUCF@1224|Proteobacteria,42M15@68525|delta/epsilon subdivisions,2MSUT@213481|Bdellovibrionales,2WIQN@28221|Deltaproteobacteria 213481|Bdellovibrionales K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template rho - - ko:K03628 ko03018,map03018 - - - ko00000,ko00001,ko03019,ko03021 - - - ATP-synt_ab,Rho_N,Rho_RNA_bind WXD2_k127_3638969_3 1210884.HG799464_gene10774 1.148e-30 131.0 COG1228@1|root,COG1228@2|Bacteria,2IYFS@203682|Planctomycetes 203682|Planctomycetes Q COG1228 Imidazolonepropionase and related - - 3.5.1.25 ko:K01443 ko00520,ko01130,map00520,map01130 - R02059 RC00166,RC00300 ko00000,ko00001,ko01000 - - - Amidohydro_1 WXD2_k127_3638969_0 1267535.KB906767_gene322 1.068e-138 464.0 COG1228@1|root,COG1228@2|Bacteria,3Y6Y2@57723|Acidobacteria 57723|Acidobacteria Q Amidohydrolase family - - - - - - - - - - - - Amidohydro_1 WXD2_k127_3638969_1 861299.J421_0738 2.02e-85 303.0 COG1228@1|root,COG1228@2|Bacteria,1ZTC8@142182|Gemmatimonadetes 2|Bacteria Q Amidohydrolase family - - - - - - - - - - - - Amidohydro_1,Amidohydro_3 WXD2_k127_3638969_2 903818.KI912268_gene2060 1.867e-80 282.0 COG1100@1|root,COG1100@2|Bacteria 2|Bacteria S GTP binding - - - ko:K06883 - - - - ko00000 - - - Arf,DUF697,MMR_HSR1 WXD2_k127_3640445_0 903818.KI912269_gene52 8.049e-188 600.0 COG0058@1|root,COG0058@2|Bacteria,3Y47Y@57723|Acidobacteria 57723|Acidobacteria G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties - - 2.4.1.1 ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 - R02111 - ko00000,ko00001,ko01000 - GT35 - Phosphorylase WXD2_k127_3640445_2 221288.JH992901_gene2489 6.778e-42 170.0 COG1670@1|root,COG1670@2|Bacteria,1G621@1117|Cyanobacteria 1117|Cyanobacteria J PFAM Acetyltransferase (GNAT) family - - - - - - - - - - - - Acetyltransf_3 WXD2_k127_3640445_1 1121920.AUAU01000012_gene2631 3.5e-184 605.0 COG1629@1|root,COG4771@2|Bacteria,3Y3ZU@57723|Acidobacteria 57723|Acidobacteria P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg,Plug,TonB_dep_Rec WXD2_k127_3642807_0 204669.Acid345_2603 1.62e-148 486.0 COG4191@1|root,COG4191@2|Bacteria,3Y42C@57723|Acidobacteria,2JP3M@204432|Acidobacteriia 57723|Acidobacteria T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HAMP,HATPase_c,HisKA WXD2_k127_3642807_1 404589.Anae109_1798 2.085e-129 434.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2WKFQ@28221|Deltaproteobacteria 28221|Deltaproteobacteria T PFAM response regulator receiver - - - ko:K07713 ko02020,map02020 M00499 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat WXD2_k127_3642807_3 204669.Acid345_2605 7.917e-46 174.0 COG1913@1|root,COG1913@2|Bacteria,3Y880@57723|Acidobacteria 57723|Acidobacteria S Peptidase family M54 - - - ko:K06974 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M54 WXD2_k127_3642807_2 204669.Acid345_0767 4.487e-74 258.0 COG0509@1|root,COG0509@2|Bacteria,3Y7RS@57723|Acidobacteria 57723|Acidobacteria E Glycine cleavage H-protein - - - - - - - - - - - - GCV_H WXD2_k127_3642807_4 710696.Intca_2650 0.000408 43.0 COG2267@1|root,COG2267@2|Bacteria,2GJ78@201174|Actinobacteria,4FFM8@85021|Intrasporangiaceae 201174|Actinobacteria I Hydrolase - - - - - - - - - - - - Abhydrolase_1,Abhydrolase_4 WXD2_k127_3648311_4 1304885.AUEY01000003_gene534 1.299e-42 168.0 COG2199@1|root,COG3706@2|Bacteria,1MWHH@1224|Proteobacteria,42TBQ@68525|delta/epsilon subdivisions,2WPWC@28221|Deltaproteobacteria,2MPSG@213118|Desulfobacterales 28221|Deltaproteobacteria T Cache domain - - - - - - - - - - - - GGDEF,dCache_1 WXD2_k127_3648311_2 1123073.KB899242_gene939 2.588e-79 272.0 COG1462@1|root,COG1462@2|Bacteria,1Q8KJ@1224|Proteobacteria,1RU2Q@1236|Gammaproteobacteria,1X6HV@135614|Xanthomonadales 135614|Xanthomonadales M Peptidoglycan-synthase activator LpoB - - - - - - - - - - - - CsgG WXD2_k127_3648311_3 1232410.KI421413_gene661 5.899e-46 173.0 COG1974@1|root,COG1974@2|Bacteria,1MW80@1224|Proteobacteria,42PAH@68525|delta/epsilon subdivisions,2WKSM@28221|Deltaproteobacteria,43SE6@69541|Desulfuromonadales 28221|Deltaproteobacteria K Represses a number of genes involved in the response to DNA damage (SOS response) lexA - 3.4.21.88 ko:K01356,ko:K03503 - M00729 - - ko00000,ko00002,ko01000,ko01002,ko03400 - - - LexA_DNA_bind,Peptidase_S24 WXD2_k127_3648311_5 76114.ebD35 0.0001942 49.0 COG1396@1|root,COG1396@2|Bacteria,1NIMT@1224|Proteobacteria,2VY8C@28216|Betaproteobacteria 28216|Betaproteobacteria K Helix-turn-helix domain - - - - - - - - - - - - HTH_31 WXD2_k127_3648311_0 1267535.KB906767_gene4838 6.684e-89 321.0 COG0457@1|root,COG3119@1|root,COG0457@2|Bacteria,COG3119@2|Bacteria 2|Bacteria P arylsulfatase activity - - - - - - - - - - - - Sulfatase,TPR_1,TPR_11,TPR_16,TPR_19,TPR_2,TPR_8 WXD2_k127_3648311_1 1267535.KB906767_gene494 4.066e-82 299.0 COG0457@1|root,COG3119@1|root,COG0457@2|Bacteria,COG3119@2|Bacteria,3Y6V8@57723|Acidobacteria 57723|Acidobacteria P Sulfatase - - - - - - - - - - - - Sulfatase,TPR_16 WXD2_k127_3648795_3 414684.RC1_0585 7.232e-50 190.0 COG0053@1|root,COG0053@2|Bacteria,1MUDS@1224|Proteobacteria,2TT78@28211|Alphaproteobacteria,2JPSR@204441|Rhodospirillales 204441|Rhodospirillales P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family fieF - - ko:K13283 - - - - ko00000,ko02000 2.A.4.7.1 - - Cation_efflux,ZT_dimer WXD2_k127_3648795_4 1112212.JH584235_gene3381 2.181e-10 63.0 2EFZF@1|root,339RM@2|Bacteria,1Q79X@1224|Proteobacteria,2UWHC@28211|Alphaproteobacteria,2K7QX@204457|Sphingomonadales 204457|Sphingomonadales - - - - - - - - - - - - - - - WXD2_k127_3648795_2 404589.Anae109_3866 3.194e-55 209.0 COG0025@1|root,COG0025@2|Bacteria,1N7PG@1224|Proteobacteria,42V45@68525|delta/epsilon subdivisions,2WRJ6@28221|Deltaproteobacteria 28221|Deltaproteobacteria P NhaP-type Na H and K H - - - - - - - - - - - - - WXD2_k127_3648795_1 404589.Anae109_3867 5.116e-61 228.0 COG0475@1|root,COG0475@2|Bacteria,1R9PF@1224|Proteobacteria,42RF1@68525|delta/epsilon subdivisions,2WNZ0@28221|Deltaproteobacteria,2YVE9@29|Myxococcales 28221|Deltaproteobacteria P Sodium/hydrogen exchanger family - - - - - - - - - - - - CBS,Na_H_Exchanger,Usp WXD2_k127_3648795_0 1340493.JNIF01000003_gene1856 3.688e-148 483.0 COG0215@1|root,COG0215@2|Bacteria,3Y2PW@57723|Acidobacteria 57723|Acidobacteria J Belongs to the class-I aminoacyl-tRNA synthetase family cysS - 6.1.1.16 ko:K01883 ko00970,map00970 M00359,M00360 R03650 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - DALR_2,tRNA-synt_1e WXD2_k127_3656925_0 314230.DSM3645_25619 2.172e-155 500.0 COG0821@1|root,COG0821@2|Bacteria,2IXN9@203682|Planctomycetes 203682|Planctomycetes I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate ispG GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 ko:K03526 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R08689,R10859 RC01486 ko00000,ko00001,ko00002,ko01000 - - - GcpE WXD2_k127_3656925_7 338963.Pcar_2454 2.099e-32 144.0 COG0597@1|root,COG0597@2|Bacteria,1RGV9@1224|Proteobacteria,42UAT@68525|delta/epsilon subdivisions,2WQ31@28221|Deltaproteobacteria,43UXP@69541|Desulfuromonadales 28221|Deltaproteobacteria MU Signal peptidase (SPase) II lspA - 3.4.23.36 ko:K03101 ko03060,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_A8 WXD2_k127_3656925_3 1385517.N800_00430 1.646e-89 317.0 COG2057@1|root,COG2057@2|Bacteria,1RA4V@1224|Proteobacteria,1RP21@1236|Gammaproteobacteria,1X45N@135614|Xanthomonadales 135614|Xanthomonadales I transferase lpsJ - 2.8.3.5 ko:K01029 ko00072,ko00280,ko00650,map00072,map00280,map00650 - R00410 RC00014 ko00000,ko00001,ko01000 - - - CoA_trans WXD2_k127_3656925_9 1303518.CCALI_01581 5.656e-15 88.0 2A08G@1|root,33ENC@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_3656925_6 1183438.GKIL_3078 1.686e-33 147.0 COG1807@1|root,COG1807@2|Bacteria,1GCPV@1117|Cyanobacteria 1117|Cyanobacteria M Dolichyl-phosphate-mannose-protein mannosyltransferase - - - - - - - - - - - - PMT_2 WXD2_k127_3656925_2 1184267.A11Q_1273 9.695e-107 352.0 COG1788@1|root,COG1788@2|Bacteria,1MVEI@1224|Proteobacteria,42QMC@68525|delta/epsilon subdivisions,2MSR4@213481|Bdellovibrionales,2WMDH@28221|Deltaproteobacteria 213481|Bdellovibrionales I 3-oxoacid CoA-transferase scoA - 2.8.3.5 ko:K01028 ko00072,ko00280,ko00650,map00072,map00280,map00650 - R00410 RC00014 ko00000,ko00001,ko01000 - - - CoA_trans WXD2_k127_3656925_1 1382356.JQMP01000003_gene1909 1.15e-110 370.0 COG0489@1|root,COG0489@2|Bacteria,2G60P@200795|Chloroflexi,27XJW@189775|Thermomicrobia 189775|Thermomicrobia D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP - - - ko:K03593 - - - - ko00000,ko03029,ko03036 - - - FeS_assembly_P,ParA WXD2_k127_3656925_4 32049.SYNPCC7002_A1154 4.676e-64 228.0 COG1611@1|root,COG1611@2|Bacteria,1G0YF@1117|Cyanobacteria,1H48K@1129|Synechococcus 1117|Cyanobacteria S Possible lysine decarboxylase - - 3.2.2.10 ko:K06966 ko00230,ko00240,map00230,map00240 - R00182,R00510 RC00063,RC00318 ko00000,ko00001,ko01000 - - - Lysine_decarbox WXD2_k127_3656925_10 316274.Haur_0845 3.078e-14 85.0 COG0457@1|root,COG0457@2|Bacteria,2G770@200795|Chloroflexi,374ST@32061|Chloroflexia 32061|Chloroflexia S Domain of unknown function (DUF4388) - - - - - - - - - - - - DUF4388 WXD2_k127_3656925_5 1125863.JAFN01000001_gene3329 9.84e-36 151.0 COG2199@1|root,COG2203@1|root,COG2199@2|Bacteria,COG2203@2|Bacteria,1RGKE@1224|Proteobacteria,43CRY@68525|delta/epsilon subdivisions,2X7ZI@28221|Deltaproteobacteria 28221|Deltaproteobacteria T diguanylate cyclase - - - - - - - - - - - - GAF,GGDEF WXD2_k127_3656925_11 316055.RPE_0808 3.065e-06 58.0 COG0438@1|root,COG0438@2|Bacteria,1MUTA@1224|Proteobacteria,2TSPN@28211|Alphaproteobacteria,3JVR6@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria M Glycosyl transferase 4-like domain - - - - - - - - - - - - Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1 WXD2_k127_3656925_8 646529.Desaci_3292 7.952e-22 100.0 COG0517@1|root,COG0617@1|root,COG0618@1|root,COG0517@2|Bacteria,COG0617@2|Bacteria,COG0618@2|Bacteria,1TQ2A@1239|Firmicutes,247XC@186801|Clostridia,260EB@186807|Peptococcaceae 186801|Clostridia J tRNA nucleotidyltransferase poly(A) polymerase cca - 2.7.7.19,2.7.7.72 ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 - R09382,R09383,R09384,R09386 RC00078 ko00000,ko00001,ko01000,ko03016,ko03019 - - - CBS,DHH,DHHA1,PolyA_pol,PolyA_pol_RNAbd,tRNA_NucTran2_2 WXD2_k127_3669099_3 159450.NH14_07010 4.067e-67 231.0 COG0346@1|root,COG0346@2|Bacteria,1N116@1224|Proteobacteria,2VRA3@28216|Betaproteobacteria,1K816@119060|Burkholderiaceae 28216|Betaproteobacteria E glyoxalase - - - ko:K07032 - - - - ko00000 - - - Glyoxalase WXD2_k127_3669099_1 443143.GM18_0402 1.304e-76 262.0 2BCQC@1|root,326AQ@2|Bacteria,1RKFR@1224|Proteobacteria 1224|Proteobacteria S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - WXD2_k127_3669099_0 596153.Alide_2538 7.763e-94 310.0 COG3865@1|root,COG3865@2|Bacteria,1N7IY@1224|Proteobacteria,2VKXG@28216|Betaproteobacteria,4AAWW@80864|Comamonadaceae 28216|Betaproteobacteria S 3-demethylubiquinone-9 3-methyltransferase - - 2.1.1.222,2.1.1.64 ko:K00568 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00117 R04988,R05614,R08769,R08781 RC00003,RC00392,RC01895 ko00000,ko00001,ko00002,ko01000 - - - 3-dmu-9_3-mt WXD2_k127_3669099_4 1120934.KB894407_gene5191 1.056e-39 154.0 COG4899@1|root,COG4899@2|Bacteria,2IGN5@201174|Actinobacteria,4E63J@85010|Pseudonocardiales 201174|Actinobacteria S Uncharacterized protein conserved in bacteria (DUF2199) - - - - - - - - - - - - DUF2199 WXD2_k127_3669099_5 1206733.BAGC01000044_gene848 3.334e-38 149.0 2EHMA@1|root,33BD2@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - ABM WXD2_k127_3669099_2 1265310.CCBD010000043_gene2223 4.089e-76 264.0 COG2267@1|root,COG2267@2|Bacteria,2I8UI@201174|Actinobacteria 201174|Actinobacteria I Alpha beta hydrolase - - - - - - - - - - - - Abhydrolase_1,Abhydrolase_6,Hydrolase_4 WXD2_k127_3669099_7 1286093.C266_22059 7.623e-08 61.0 2AH4K@1|root,317E8@2|Bacteria,1PYQE@1224|Proteobacteria,2W6I7@28216|Betaproteobacteria 28216|Betaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_3669099_6 1122185.N792_12800 3.79e-10 63.0 2DM8U@1|root,3273Z@2|Bacteria,1MYT0@1224|Proteobacteria,1S70Q@1236|Gammaproteobacteria,1XBQV@135614|Xanthomonadales 135614|Xanthomonadales S Signal peptide protein - - - - - - - - - - - - - WXD2_k127_3690659_1 649638.Trad_2756 3.165e-56 213.0 COG1760@1|root,COG1760@2|Bacteria,1WIC1@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus E TIGRFAM L-serine dehydratase, iron-sulfur-dependent, beta subunit - - 4.3.1.17 ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 - R00220,R00590 RC00331,RC02600 ko00000,ko00001,ko01000 - - - ACT,SDH_beta WXD2_k127_3690659_2 1118153.MOY_00665 1.976e-19 95.0 COG0745@1|root,COG0745@2|Bacteria,1RHCU@1224|Proteobacteria,1SBB6@1236|Gammaproteobacteria 1236|Gammaproteobacteria T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - - - - - - - - - - Response_reg WXD2_k127_3690659_0 1158345.JNLL01000001_gene1734 1.494e-145 474.0 COG0191@1|root,COG0191@2|Bacteria,2G3VP@200783|Aquificae 200783|Aquificae G Fructose-bisphosphate aldolase class-II - - - - - - - - - - - - F_bP_aldolase WXD2_k127_3693715_1 290397.Adeh_1584 1.056e-66 228.0 COG0050@1|root,COG0050@2|Bacteria,1MVC0@1224|Proteobacteria,42MWZ@68525|delta/epsilon subdivisions,2WJ2B@28221|Deltaproteobacteria,2YX6I@29|Myxococcales 28221|Deltaproteobacteria J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis tuf - - ko:K02358 - - - - ko00000,ko03012,ko03029,ko04147 - - - GTP_EFTU,GTP_EFTU_D2,GTP_EFTU_D3 WXD2_k127_3693715_0 269799.Gmet_0623 6.92e-316 982.0 COG0480@1|root,COG0480@2|Bacteria,1MUCV@1224|Proteobacteria,42M4T@68525|delta/epsilon subdivisions,2WIM7@28221|Deltaproteobacteria,43SV3@69541|Desulfuromonadales 28221|Deltaproteobacteria J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome fusA - - ko:K02355 - - - - ko00000,ko03012,ko03029 - - - EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2 WXD2_k127_3693715_2 378806.STAUR_3734 5.881e-18 83.0 COG0049@1|root,COG0049@2|Bacteria,1MXC8@1224|Proteobacteria,42QR7@68525|delta/epsilon subdivisions,2WNFM@28221|Deltaproteobacteria,2YUYC@29|Myxococcales 28221|Deltaproteobacteria J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA rpsG GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02992 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S7 WXD2_k127_3712443_2 1121920.AUAU01000010_gene29 2.64e-111 364.0 COG1143@1|root,COG3260@1|root,COG1143@2|Bacteria,COG3260@2|Bacteria,3Y89A@57723|Acidobacteria 57723|Acidobacteria C NADH ubiquinone oxidoreductase, 20 Kd subunit - - - - - - - - - - - - Fer4_7,Oxidored_q6 WXD2_k127_3712443_0 575540.Isop_0365 8.04e-191 608.0 COG3261@1|root,COG3262@1|root,COG3261@2|Bacteria,COG3262@2|Bacteria,2IZ46@203682|Planctomycetes 203682|Planctomycetes C Respiratory-chain NADH dehydrogenase, 30 Kd subunit - - - - - - - - - - - - Complex1_30kDa,Complex1_49kDa WXD2_k127_3712443_1 269799.Gmet_0372 7.596e-157 518.0 COG0651@1|root,COG0651@2|Bacteria,1MVBA@1224|Proteobacteria,42MG7@68525|delta/epsilon subdivisions,2WIRA@28221|Deltaproteobacteria,43TR1@69541|Desulfuromonadales 28221|Deltaproteobacteria CP Proton-conducting membrane transporter hyfF - - ko:K12141 - - - - ko00000,ko01000 - - - Proton_antipo_M WXD2_k127_3712443_4 1304885.AUEY01000006_gene759 1.855e-57 218.0 COG4237@1|root,COG4237@2|Bacteria,1NAT8@1224|Proteobacteria,42NDW@68525|delta/epsilon subdivisions,2WMF0@28221|Deltaproteobacteria,2MK25@213118|Desulfobacterales 28221|Deltaproteobacteria C hydrogenase 4 membrane ehrC - - ko:K12140 - - - - ko00000,ko01000 - - - Oxidored_q2 WXD2_k127_3712443_3 338966.Ppro_0337 2.282e-89 301.0 COG0650@1|root,COG0650@2|Bacteria,1MXV5@1224|Proteobacteria,42NHI@68525|delta/epsilon subdivisions,2WJ3D@28221|Deltaproteobacteria,43T74@69541|Desulfuromonadales 28221|Deltaproteobacteria C NADH dehydrogenase ehrB - - - - - - - - - - iAF987.Gmet_0374,iAF987.Gmet_2600 NADHdh WXD2_k127_3713020_5 926567.TheveDRAFT_0257 4.858e-54 193.0 COG0081@1|root,COG0081@2|Bacteria,3T9SR@508458|Synergistetes 508458|Synergistetes J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release rplA - - ko:K02863 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L1 WXD2_k127_3713020_2 316067.Geob_3636 6.649e-66 228.0 COG0080@1|root,COG0080@2|Bacteria,1RA2M@1224|Proteobacteria,42RE7@68525|delta/epsilon subdivisions,2WNAH@28221|Deltaproteobacteria,43UTJ@69541|Desulfuromonadales 28221|Deltaproteobacteria J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors rplK GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02867 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L11,Ribosomal_L11_N WXD2_k127_3713020_3 204669.Acid345_4681 7.865e-65 227.0 COG0250@1|root,COG0250@2|Bacteria,3Y3ZR@57723|Acidobacteria,2JHU8@204432|Acidobacteriia 204432|Acidobacteriia K Participates in transcription elongation, termination and antitermination nusG - - ko:K02601 - - - - ko00000,ko03009,ko03021 - - - KOW,NusG WXD2_k127_3713020_11 207954.MED92_04552 4.425e-06 49.0 COG0690@1|root,COG0690@2|Bacteria,1RDI9@1224|Proteobacteria,1S3PA@1236|Gammaproteobacteria,1XKF5@135619|Oceanospirillales 135619|Oceanospirillales U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation secE - - ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 - - SecE WXD2_k127_3713020_8 1379858.N508_00383 1.901e-13 72.0 COG0267@1|root,COG0267@2|Bacteria,2GFZW@200930|Deferribacteres 200930|Deferribacteres J Ribosomal protein L33 rpmG - - ko:K02913 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L33 WXD2_k127_3713020_12 1042376.AFPK01000068_gene476 6.381e-05 46.0 2EHBZ@1|root,33B3U@2|Bacteria,4NZK3@976|Bacteroidetes,1I71Q@117743|Flavobacteriia 976|Bacteroidetes - - - - - - - - - - - - - - - WXD2_k127_3713020_10 1121447.JONL01000001_gene735 2.17e-06 51.0 2EG8N@1|root,33A0G@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_3713020_4 266117.Rxyl_2172 4.94e-55 205.0 COG0566@1|root,COG0566@2|Bacteria,2GJMR@201174|Actinobacteria,4CPWF@84995|Rubrobacteria 84995|Rubrobacteria J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family - - 2.1.1.185 ko:K03218 - - - - ko00000,ko01000,ko03009 - - - SpoU_methylase,SpoU_sub_bind WXD2_k127_3713020_1 1382304.JNIL01000001_gene3208 4.188e-86 308.0 COG0167@1|root,COG0167@2|Bacteria,1TPFV@1239|Firmicutes 1239|Firmicutes F Catalyzes the conversion of dihydroorotate to orotate pyrD - 1.3.5.2,1.3.98.1 ko:K00226,ko:K00254 ko00240,ko01100,map00240,map01100 M00051 R01867,R01868 RC00051 ko00000,ko00001,ko00002,ko01000 - - - DHO_dh WXD2_k127_3713020_0 349161.Dred_0191 8.027e-136 447.0 COG0008@1|root,COG0008@2|Bacteria,1TPJC@1239|Firmicutes,2482P@186801|Clostridia,26070@186807|Peptococcaceae 186801|Clostridia J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) gltX - 6.1.1.17,6.1.1.24 ko:K01885,ko:K09698 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 M00121,M00359,M00360 R03651,R05578 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 - - - tRNA-synt_1c WXD2_k127_3713020_6 384765.SIAM614_14545 1.1e-43 174.0 COG0245@1|root,COG1211@1|root,COG0245@2|Bacteria,COG1211@2|Bacteria,1MVHA@1224|Proteobacteria,2TRQC@28211|Alphaproteobacteria 28211|Alphaproteobacteria I Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) ispDF - 2.7.7.60,4.6.1.12 ko:K01770,ko:K12506 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05633,R05637 RC00002,RC01440 ko00000,ko00001,ko00002,ko01000 - - - IspD,YgbB WXD2_k127_3713020_7 555088.DealDRAFT_2331 2.11e-39 155.0 COG1211@1|root,COG1211@2|Bacteria,1V3M7@1239|Firmicutes,248E6@186801|Clostridia,42JZW@68298|Syntrophomonadaceae 186801|Clostridia H Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) ispD - 2.7.7.60 ko:K00991 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05633 RC00002 ko00000,ko00001,ko00002,ko01000 - - iHN637.CLJU_RS20335 IspD WXD2_k127_3725989_1 1047013.AQSP01000079_gene2043 6.903e-33 134.0 COG0810@1|root,COG0810@2|Bacteria,2NQ1D@2323|unclassified Bacteria 2|Bacteria M Gram-negative bacterial TonB protein C-terminal - - - ko:K03832 - - - - ko00000,ko02000 2.C.1.1 - - CarbopepD_reg_2,TonB_C WXD2_k127_3725989_0 234267.Acid_1281 1.263e-57 208.0 COG0811@1|root,COG0811@2|Bacteria,3Y2M4@57723|Acidobacteria 57723|Acidobacteria U MotA TolQ ExbB proton channel - - - ko:K03561,ko:K03562 ko01120,map01120 - - - ko00000,ko02000 1.A.30.2.1,1.A.30.2.2 - - MotA_ExbB WXD2_k127_3725989_2 1297742.A176_03798 5.426e-24 106.0 COG0848@1|root,COG0848@2|Bacteria,1RDJZ@1224|Proteobacteria,42RJ1@68525|delta/epsilon subdivisions,2X6VG@28221|Deltaproteobacteria,2YVC5@29|Myxococcales 28221|Deltaproteobacteria U Biopolymer transport protein ExbD/TolR - - - ko:K03559,ko:K03560 - - - - ko00000,ko02000 1.A.30.2.1,1.A.30.2.2 - - ExbD WXD2_k127_3725989_3 483219.LILAB_01505 9.516e-20 96.0 COG0848@1|root,COG0848@2|Bacteria,1Q1RQ@1224|Proteobacteria,437EZ@68525|delta/epsilon subdivisions,2X2MA@28221|Deltaproteobacteria,2Z03D@29|Myxococcales 28221|Deltaproteobacteria U Biopolymer transport protein - - - ko:K03559,ko:K03560 - - - - ko00000,ko02000 1.A.30.2.1,1.A.30.2.2 - - ExbD WXD2_k127_3733381_11 1437608.BBIA_0058 0.0002323 46.0 COG4485@1|root,COG4485@2|Bacteria,2IBD5@201174|Actinobacteria 201174|Actinobacteria S Bacterial membrane protein, YfhO - - - - - - - - - - - - YfhO WXD2_k127_3733381_6 880072.Desac_1175 3.537e-60 218.0 COG2518@1|root,COG2518@2|Bacteria,1MXQC@1224|Proteobacteria,42QSI@68525|delta/epsilon subdivisions,2WMNJ@28221|Deltaproteobacteria,2MQC2@213462|Syntrophobacterales 28221|Deltaproteobacteria J Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins pcm GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 ko:K00573 - - - - ko00000,ko01000 - - - PCMT WXD2_k127_3733381_4 648996.Theam_1712 2.398e-76 264.0 COG0496@1|root,COG0496@2|Bacteria,2G3WU@200783|Aquificae 200783|Aquificae S Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates surE - 3.1.3.5 ko:K03787 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 - R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346 RC00017 ko00000,ko00001,ko01000 - - - SurE WXD2_k127_3733381_3 1461694.ATO9_16525 3.093e-77 267.0 COG1995@1|root,COG1995@2|Bacteria,1MX5W@1224|Proteobacteria,2TSKF@28211|Alphaproteobacteria,2PC9N@252301|Oceanicola 28211|Alphaproteobacteria C Belongs to the PdxA family pdxA - 1.1.1.262,1.1.1.408,1.1.1.409 ko:K00097,ko:K22024 ko00750,ko01100,map00750,map01100 M00124 R05681,R05837,R07406 RC00089,RC00675,RC01475 ko00000,ko00001,ko00002,ko01000 - - - PdxA WXD2_k127_3733381_8 1121920.AUAU01000002_gene2138 2.261e-27 117.0 COG1923@1|root,COG1923@2|Bacteria,3Y5JI@57723|Acidobacteria 57723|Acidobacteria S Hfq protein - - - - - - - - - - - - Hfq WXD2_k127_3733381_5 644282.Deba_2883 6.671e-68 241.0 COG2086@1|root,COG2086@2|Bacteria,1MVH6@1224|Proteobacteria,42RCI@68525|delta/epsilon subdivisions,2WMYC@28221|Deltaproteobacteria 28221|Deltaproteobacteria C Electron transfer flavoprotein etfB - - ko:K03521 - - - - ko00000 - - - ETF WXD2_k127_3733381_2 138119.DSY1714 4.157e-85 292.0 COG2025@1|root,COG2025@2|Bacteria,1TPC8@1239|Firmicutes,247NF@186801|Clostridia,260BA@186807|Peptococcaceae 186801|Clostridia C electron transfer flavoprotein, alpha subunit etfA - - ko:K03522 - - - - ko00000,ko04147 - - - ETF,ETF_alpha,Fer4 WXD2_k127_3733381_7 760568.Desku_2057 1.468e-47 180.0 COG4464@1|root,COG4464@2|Bacteria,1TQ1T@1239|Firmicutes,24JQU@186801|Clostridia,2625H@186807|Peptococcaceae 186801|Clostridia GM pfam php ywqE - 3.1.3.48 ko:K01104 - - - - ko00000,ko01000 - - - - WXD2_k127_3733381_0 1047013.AQSP01000112_gene392 1.011e-95 340.0 COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,2NNNP@2323|unclassified Bacteria 2|Bacteria D CobQ CobB MinD ParA nucleotide binding domain ywqD - 2.7.10.1 ko:K08252,ko:K13661,ko:K16554,ko:K16692 ko05111,map05111 - - - ko00000,ko00001,ko01000,ko01001,ko02000 8.A.3.1 - - AAA_31,CbiA,GNVR,ParA,Wzz WXD2_k127_3733381_10 324925.Ppha_1011 2.236e-20 102.0 COG1596@1|root,COG1596@2|Bacteria 2|Bacteria M polysaccharide export - - - ko:K01991 ko02026,map02026 - - - ko00000,ko00001,ko02000 1.B.18 - - Poly_export,SLBB WXD2_k127_3733381_9 2340.JV46_20030 3.1e-23 115.0 COG3307@1|root,COG3307@2|Bacteria,1N225@1224|Proteobacteria,1RQWW@1236|Gammaproteobacteria,1J709@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria M O-Antigen ligase - - - - - - - - - - - - Wzy_C WXD2_k127_3784302_1 215803.DB30_1696 1.138e-164 525.0 COG0366@1|root,COG0366@2|Bacteria,1MU90@1224|Proteobacteria,42ZYH@68525|delta/epsilon subdivisions,2WVEZ@28221|Deltaproteobacteria,2YZS1@29|Myxococcales 28221|Deltaproteobacteria G Alpha-amylase domain - - 3.2.1.1 ko:K01176 ko00500,ko01100,ko04973,map00500,map01100,map04973 - R02108,R02112,R11262 - ko00000,ko00001,ko01000 - GH13 - Alpha-amylase,CBM_20,DUF3459 WXD2_k127_3784302_2 1242864.D187_001103 3.435e-154 495.0 COG3842@1|root,COG3842@2|Bacteria,1MU3I@1224|Proteobacteria,42NVJ@68525|delta/epsilon subdivisions,2WJN1@28221|Deltaproteobacteria,2YUG1@29|Myxococcales 28221|Deltaproteobacteria P Belongs to the ABC transporter superfamily - - 3.6.3.20 ko:K05816,ko:K10111,ko:K10112 ko02010,map02010 M00194,M00196,M00197,M00198,M00200,M00201,M00204,M00206,M00207,M00491,M00602,M00605,M00606 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.1,3.A.1.1.3 - - ABC_tran,TOBE_2 WXD2_k127_3784302_0 215803.DB30_1694 1.08e-169 542.0 COG2182@1|root,COG2182@2|Bacteria,1N9AE@1224|Proteobacteria,43EXV@68525|delta/epsilon subdivisions,2X9AJ@28221|Deltaproteobacteria,2YZDJ@29|Myxococcales 28221|Deltaproteobacteria G Bacterial extracellular solute-binding protein - - - ko:K10108,ko:K15770 ko02010,ko02030,map02010,map02030 M00194,M00491 - - ko00000,ko00001,ko00002,ko02000 3.A.1.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.22 - - SBP_bac_1 WXD2_k127_3803238_1 518766.Rmar_0733 3.691e-10 74.0 COG5000@1|root,COG5000@2|Bacteria,4NE49@976|Bacteroidetes,1FJ03@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain zraS_1 - - - - - - - - - - - HATPase_c,HisKA WXD2_k127_3803238_0 1071073.KI530540_gene3385 6.074e-37 149.0 COG0564@1|root,COG0564@2|Bacteria,1TS1T@1239|Firmicutes,4HBRY@91061|Bacilli,1ZB25@1386|Bacillus 91061|Bacilli J Responsible for synthesis of pseudouridine from uracil rluD GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23,5.4.99.28,5.4.99.29 ko:K06177,ko:K06180 - - - - ko00000,ko01000,ko03009,ko03016 - - - PseudoU_synth_2 WXD2_k127_3803238_2 296591.Bpro_1663 4.384e-06 54.0 COG1917@1|root,COG1917@2|Bacteria,1MZFB@1224|Proteobacteria 1224|Proteobacteria S Cupin domain - - - - - - - - - - - - Cupin_2 WXD2_k127_3803362_4 1121920.AUAU01000004_gene908 8.208e-66 239.0 COG1100@1|root,COG1100@2|Bacteria 2|Bacteria S GTP binding - - - ko:K06883 - - - - ko00000 - - - DUF697,MMR_HSR1 WXD2_k127_3803362_6 1267535.KB906767_gene291 1.364e-25 109.0 COG1193@1|root,COG1193@2|Bacteria,3Y8PZ@57723|Acidobacteria 57723|Acidobacteria L Smr domain - - - - - - - - - - - - Smr WXD2_k127_3803362_3 289376.THEYE_A0564 2.275e-85 297.0 COG0379@1|root,COG0379@2|Bacteria,3J0NV@40117|Nitrospirae 40117|Nitrospirae H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate nadA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 ko:K03517 ko00760,ko01100,map00760,map01100 M00115 R04292 RC01119 ko00000,ko00001,ko00002,ko01000 - - - NadA WXD2_k127_3803362_5 706587.Desti_3996 1.569e-35 154.0 COG1597@1|root,COG1597@2|Bacteria,1QH8J@1224|Proteobacteria,42Y04@68525|delta/epsilon subdivisions,2WSRW@28221|Deltaproteobacteria 28221|Deltaproteobacteria I Diacylglycerol kinase catalytic domain - - - - - - - - - - - - DAGK_cat WXD2_k127_3803362_2 204669.Acid345_1052 1.66e-87 319.0 COG0457@1|root,COG0515@1|root,COG5616@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,COG5616@2|Bacteria,3Y2HR@57723|Acidobacteria,2JI02@204432|Acidobacteriia 204432|Acidobacteriia KLT Tetratricopeptide repeats - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase,TPR_11,TPR_16,TPR_2,Trans_reg_C WXD2_k127_3803362_1 1249627.D779_1022 4.059e-89 336.0 COG3604@1|root,COG3604@2|Bacteria,1QTT3@1224|Proteobacteria,1T1G7@1236|Gammaproteobacteria,1WX1Q@135613|Chromatiales 135613|Chromatiales KT Fis Family - - - ko:K02584 ko02020,map02020 - - - ko00000,ko00001,ko03000 - - - GAF,GAF_2,HTH_8,Sigma54_activat WXD2_k127_3803362_0 1242864.D187_003876 2.002e-90 319.0 COG3975@1|root,COG3975@2|Bacteria,1MUHZ@1224|Proteobacteria,42YBA@68525|delta/epsilon subdivisions,2WUP5@28221|Deltaproteobacteria,2YX31@29|Myxococcales 28221|Deltaproteobacteria S Peptidase, M61 - - - - - - - - - - - - PDZ_2,Peptidase_M61 WXD2_k127_3816816_0 398767.Glov_0161 2.249e-40 159.0 COG1077@1|root,COG1077@2|Bacteria 2|Bacteria D Cell shape determining protein MreB Mrl mreB2 - - ko:K03569 - - - - ko00000,ko02048,ko03036,ko04812 1.A.33.1,9.B.157.1 - - MreB_Mbl WXD2_k127_3816816_2 945713.IALB_0305 2.035e-25 119.0 COG0776@1|root,COG0776@2|Bacteria 2|Bacteria L regulation of translation hup - - ko:K03530 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding WXD2_k127_3816816_3 1125863.JAFN01000001_gene3473 1.778e-22 104.0 COG1247@1|root,COG1247@2|Bacteria,1PBZE@1224|Proteobacteria,42VVQ@68525|delta/epsilon subdivisions,2WR9W@28221|Deltaproteobacteria 28221|Deltaproteobacteria M Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_4 WXD2_k127_3816816_1 338966.Ppro_0645 2.942e-34 142.0 COG0565@1|root,COG0565@2|Bacteria,1N47Y@1224|Proteobacteria,42S9X@68525|delta/epsilon subdivisions,2WNTZ@28221|Deltaproteobacteria,43SI1@69541|Desulfuromonadales 28221|Deltaproteobacteria J Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA trmJ - - ko:K02533 - - - - ko00000,ko01000,ko03016 - - - SpoU_methylase WXD2_k127_3816816_4 1242864.D187_009945 1.058e-08 68.0 COG1629@1|root,COG4771@2|Bacteria 2|Bacteria P TonB-dependent receptor - - - ko:K16087 - - - - ko00000,ko02000 1.B.14.2 - - TonB_dep_Rec WXD2_k127_3816876_0 234267.Acid_2377 5.051e-131 422.0 COG0388@1|root,COG0388@2|Bacteria,3Y7FJ@57723|Acidobacteria 57723|Acidobacteria S Carbon-nitrogen hydrolase - - - - - - - - - - - - CN_hydrolase WXD2_k127_3816876_5 478749.BRYFOR_06573 5.347e-14 77.0 COG1917@1|root,COG2207@1|root,COG1917@2|Bacteria,COG2207@2|Bacteria,1TSRS@1239|Firmicutes,24BXX@186801|Clostridia 186801|Clostridia K transcriptional regulator (AraC family) - - - - - - - - - - - - AraC_binding,Cupin_2,HTH_18,HTH_AraC WXD2_k127_3816876_3 298655.KI912266_gene2271 4.088e-46 179.0 COG3509@1|root,COG3509@2|Bacteria,2GNV6@201174|Actinobacteria,4EU0N@85013|Frankiales 201174|Actinobacteria Q Esterase PHB depolymerase - - - ko:K03932 - - - - ko00000 - CE1 - Esterase_phd WXD2_k127_3816876_2 1121920.AUAU01000013_gene1716 2.335e-50 190.0 COG4313@1|root,COG4313@2|Bacteria,3Y7K3@57723|Acidobacteria 57723|Acidobacteria C Protein involved in meta-pathway of phenol degradation - - - - - - - - - - - - - WXD2_k127_3841657_0 1122176.KB903554_gene4017 7.758e-241 781.0 COG4888@1|root,COG4888@2|Bacteria 2|Bacteria G ASPIC UnbV domain protein - - - - - - - - - - - - FG-GAP,UnbV_ASPIC,VCBS WXD2_k127_3841657_1 1192034.CAP_5366 5.877e-126 430.0 COG0119@1|root,COG0119@2|Bacteria,1MUNQ@1224|Proteobacteria,42MSP@68525|delta/epsilon subdivisions,2WIUZ@28221|Deltaproteobacteria,2YTZB@29|Myxococcales 28221|Deltaproteobacteria E synthase homocitrate synthase family - - 2.3.3.13 ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 M00432 R01213 RC00004,RC00470,RC02754 br01601,ko00000,ko00001,ko00002,ko01000 - - - HMGL-like WXD2_k127_3841657_5 3656.XP_008462594.1 1.503e-11 76.0 COG3914@1|root,KOG4626@2759|Eukaryota,37IV9@33090|Viridiplantae,3G9DX@35493|Streptophyta,4JNJN@91835|fabids 35493|Streptophyta GOT UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase SPY GO:0001101,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0007154,GO:0007165,GO:0008150,GO:0008194,GO:0008375,GO:0009719,GO:0009725,GO:0009735,GO:0009736,GO:0009739,GO:0009740,GO:0009755,GO:0009937,GO:0009938,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010476,GO:0010646,GO:0010648,GO:0016262,GO:0016740,GO:0016757,GO:0016758,GO:0019222,GO:0023051,GO:0023052,GO:0023057,GO:0031323,GO:0032870,GO:0033993,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070887,GO:0071229,GO:0071310,GO:0071368,GO:0071370,GO:0071396,GO:0071495,GO:0140096,GO:1901700,GO:1901701,GO:2000377 - - - - - - - - - - Glyco_transf_41,TPR_1,TPR_10,TPR_16,TPR_7,TPR_8 WXD2_k127_3841657_4 1232410.KI421421_gene3250 2.637e-26 121.0 COG0454@1|root,COG0456@2|Bacteria,1RGZ2@1224|Proteobacteria 1224|Proteobacteria K Acetyltransferase (GNAT) family - - - - - - - - - - - - Acetyltransf_1 WXD2_k127_3841657_3 648757.Rvan_0041 2.581e-46 187.0 COG1028@1|root,COG1028@2|Bacteria,1MUEV@1224|Proteobacteria,2U2FQ@28211|Alphaproteobacteria 28211|Alphaproteobacteria IQ KR domain - - 1.1.1.100 ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short_C2 WXD2_k127_3841657_2 85643.Tmz1t_2948 7.271e-110 361.0 COG1924@1|root,COG1924@2|Bacteria,1R6HU@1224|Proteobacteria,2VSQQ@28216|Betaproteobacteria,2KXX8@206389|Rhodocyclales 206389|Rhodocyclales I BadF/BadG/BcrA/BcrD ATPase family - - 1.3.7.8 ko:K04115 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 M00541 R02451 RC00002,RC01839 ko00000,ko00001,ko00002,ko01000 - - - BcrAD_BadFG WXD2_k127_3841657_6 1244869.H261_03128 1.564e-11 65.0 COG1924@1|root,COG1924@2|Bacteria,1R411@1224|Proteobacteria,2U1DN@28211|Alphaproteobacteria 28211|Alphaproteobacteria C Benzoyl-CoA reductase subunit - - 1.3.7.8 ko:K04114 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 M00541 R02451 RC00002,RC01839 ko00000,ko00001,ko00002,ko01000 - - - BcrAD_BadFG WXD2_k127_384196_1 1382359.JIAL01000001_gene1505 1.222e-122 398.0 COG0568@1|root,COG0568@2|Bacteria,3Y2XG@57723|Acidobacteria,2JHX1@204432|Acidobacteriia 204432|Acidobacteriia K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth sigA - - ko:K03086 - - - - ko00000,ko03021 - - - Sigma70_r1_1,Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4 WXD2_k127_384196_5 1380350.JIAP01000031_gene1034 4.869e-17 88.0 COG3000@1|root,COG3000@2|Bacteria,1N39U@1224|Proteobacteria,2UEMG@28211|Alphaproteobacteria 28211|Alphaproteobacteria I Fatty acid hydroxylase - - - - - - - - - - - - FA_hydroxylase WXD2_k127_384196_4 65497.JODV01000012_gene2337 6.524e-26 118.0 COG0500@1|root,COG2226@2|Bacteria,2GJUF@201174|Actinobacteria,4E3Z1@85010|Pseudonocardiales 201174|Actinobacteria Q Mycolic acid cyclopropane synthetase - GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0009273,GO:0009987,GO:0016020,GO:0016043,GO:0016740,GO:0016741,GO:0022607,GO:0032259,GO:0042546,GO:0044085,GO:0044464,GO:0071554,GO:0071766,GO:0071770,GO:0071840,GO:0071944 - - - - - - - - - - Methyltransf_11,Methyltransf_25 WXD2_k127_384196_2 693986.MOC_4706 1.617e-46 187.0 COG1018@1|root,COG1600@1|root,COG3255@1|root,COG1018@2|Bacteria,COG1600@2|Bacteria,COG3255@2|Bacteria,1MY2Q@1224|Proteobacteria,2U0WY@28211|Alphaproteobacteria,1JSES@119045|Methylobacteriaceae 28211|Alphaproteobacteria C oxidoreductase FAD NAD(P)-binding domain protein - - - - - - - - - - - - FAD_binding_6,Fer2,NAD_binding_1 WXD2_k127_384196_3 945713.IALB_0798 1.774e-46 180.0 COG0492@1|root,COG0492@2|Bacteria 2|Bacteria C ferredoxin-NADP+ reductase activity - - - - - - - - - - - - FAD_binding_2,FAD_oxidored,Pyr_redox_2,Thioredoxin_3,cNMP_binding WXD2_k127_384196_6 288000.BBta_p0193 6.788e-15 90.0 29T2P@1|root,30E96@2|Bacteria,1R4WC@1224|Proteobacteria,2U4MI@28211|Alphaproteobacteria,3K31S@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria C Class III cytochrome C family - - - - - - - - - - - - Cytochrom_CIII WXD2_k127_384196_0 204669.Acid345_0471 3.884e-130 455.0 COG0484@1|root,COG0484@2|Bacteria 2|Bacteria O heat shock protein binding - - - - - - - - - - - - - WXD2_k127_3844841_0 909663.KI867150_gene1369 5.416e-82 284.0 COG4262@1|root,COG4262@2|Bacteria,1QUK8@1224|Proteobacteria,42SZH@68525|delta/epsilon subdivisions,2WPX7@28221|Deltaproteobacteria,2MQHU@213462|Syntrophobacterales 28221|Deltaproteobacteria S Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - - - - - - - - - - Spermine_synth WXD2_k127_3844841_1 1157490.EL26_16960 7.116e-49 196.0 COG2199@1|root,COG2200@1|root,COG2199@2|Bacteria,COG2200@2|Bacteria,1TQ94@1239|Firmicutes,4HAY4@91061|Bacilli,2785U@186823|Alicyclobacillaceae 91061|Bacilli T Putative diguanylate phosphodiesterase - - - - - - - - - - - - CBS,EAL,GGDEF WXD2_k127_3844841_2 509190.Cseg_3862 9.451e-25 120.0 COG0745@1|root,COG0745@2|Bacteria,1MY2Z@1224|Proteobacteria,2TRFZ@28211|Alphaproteobacteria,2KFH3@204458|Caulobacterales 204458|Caulobacterales K phosphate regulon transcriptional regulatory protein PhoB phoB - - ko:K07657 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C WXD2_k127_3847794_0 1005048.CFU_3179 1.121e-155 502.0 COG0339@1|root,COG0339@2|Bacteria,1R4AJ@1224|Proteobacteria,2VP2M@28216|Betaproteobacteria,476SV@75682|Oxalobacteraceae 28216|Betaproteobacteria M Peptidase family M3 - - 3.4.24.15 ko:K01392 ko04614,ko05143,map04614,map05143 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_M3 WXD2_k127_3847794_2 313606.M23134_03050 1.266e-22 112.0 28M10@1|root,2ZAFW@2|Bacteria,4NIF8@976|Bacteroidetes,47KHS@768503|Cytophagia 976|Bacteroidetes S Domain of unknown function (DUF4403) - - - - - - - - - - - - DUF4403 WXD2_k127_3847794_1 391625.PPSIR1_19754 1.151e-40 158.0 COG2967@1|root,COG2967@2|Bacteria,1MZ2Z@1224|Proteobacteria,431ED@68525|delta/epsilon subdivisions,2WWZ0@28221|Deltaproteobacteria,2YVD5@29|Myxococcales 28221|Deltaproteobacteria P ApaG domain apaG - - ko:K06195 - - - - ko00000 - - - DUF525 WXD2_k127_3847794_3 357804.Ping_0248 9.051e-05 56.0 COG2931@1|root,COG4932@1|root,COG2931@2|Bacteria,COG4932@2|Bacteria 2|Bacteria M domain protein - GO:0001968,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0044877,GO:0051704,GO:0070051,GO:0098630,GO:0098743 - ko:K13732,ko:K13733 ko05100,map05100 - - - ko00000,ko00001 - - - Collagen_bind,Gram_pos_anchor,HemolysinCabind,MucBP,SdrG_C_C,YSIRK_signal WXD2_k127_3860389_0 1216007.AOPM01000084_gene1070 0.0 1142.0 COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,1MX41@1224|Proteobacteria,1RP38@1236|Gammaproteobacteria,2Q0BE@267888|Pseudoalteromonadaceae 1236|Gammaproteobacteria M Tricorn protease homolog - - - ko:K08676 - - - - ko00000,ko01000,ko01002 - - - PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ WXD2_k127_3860389_1 290397.Adeh_1992 2.385e-100 342.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2WKJX@28221|Deltaproteobacteria 28221|Deltaproteobacteria T response regulator - - - - - - - - - - - - HTH_8,Response_reg,Sigma54_activat WXD2_k127_3861596_3 1300345.LF41_1012 2.166e-32 143.0 COG0400@1|root,COG0400@2|Bacteria 2|Bacteria S palmitoyl-(protein) hydrolase activity - - - ko:K06999 - - - - ko00000 - - - Abhydrolase_1,Abhydrolase_2,Abhydrolase_4,Esterase WXD2_k127_3861596_4 247490.KSU1_C0152 6.569e-07 62.0 COG0457@1|root,COG0457@2|Bacteria,2J0KQ@203682|Planctomycetes 203682|Planctomycetes S Tetratricopeptide repeat - - - - - - - - - - - - - WXD2_k127_3861596_2 518766.Rmar_0611 2.709e-35 142.0 COG1376@1|root,COG1376@2|Bacteria,4P35B@976|Bacteroidetes 976|Bacteroidetes S L,D-transpeptidase catalytic domain - - - - - - - - - - - - YkuD WXD2_k127_3861596_1 269799.Gmet_0795 6.951e-69 242.0 COG0500@1|root,COG0500@2|Bacteria,1QW0F@1224|Proteobacteria,43C56@68525|delta/epsilon subdivisions,2X7FJ@28221|Deltaproteobacteria 28221|Deltaproteobacteria H Methyltransferase domain - - - - - - - - - - - - Methyltransf_11 WXD2_k127_3861596_0 452637.Oter_4049 3.866e-76 266.0 COG0661@1|root,COG0661@2|Bacteria,46UJV@74201|Verrucomicrobia,3K7NS@414999|Opitutae 414999|Opitutae S ABC1 family - - - ko:K03688 - - - - ko00000 - - - ABC1 WXD2_k127_3890768_1 1499967.BAYZ01000105_gene3512 1.059e-100 338.0 COG0714@1|root,COG0714@2|Bacteria,2NNMQ@2323|unclassified Bacteria 2|Bacteria S ATPase associated with various cellular - - - ko:K03924 - - - - ko00000,ko01000 - - - AAA_3 WXD2_k127_3890768_5 638303.Thal_0930 7.933e-19 98.0 COG1721@1|root,COG1721@2|Bacteria,2G50A@200783|Aquificae 200783|Aquificae S Protein of unknown function DUF58 - - - - - - - - - - - - DUF58 WXD2_k127_3890768_4 330214.NIDE0342 5.873e-36 157.0 COG1305@1|root,COG1305@2|Bacteria,3J150@40117|Nitrospirae 40117|Nitrospirae E Transglutaminase/protease-like homologues - - - - - - - - - - - - DUF3488,Transglut_core WXD2_k127_3890768_3 404589.Anae109_2333 4.281e-84 286.0 COG0854@1|root,COG0854@2|Bacteria,1MU9W@1224|Proteobacteria,42NZY@68525|delta/epsilon subdivisions,2WJDY@28221|Deltaproteobacteria,2YVHT@29|Myxococcales 28221|Deltaproteobacteria H Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate pdxJ GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 ko:K03474 ko00750,ko01100,map00750,map01100 M00124 R05838 RC01476 ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_1885 PdxJ WXD2_k127_3890768_0 457570.Nther_0407 5.145e-131 444.0 COG0488@1|root,COG0488@2|Bacteria,1TPAX@1239|Firmicutes,247U6@186801|Clostridia 186801|Clostridia S Abc transporter - - - ko:K06158 - - - - ko00000,ko03012 - - - ABC_tran,ABC_tran_CTD,ABC_tran_Xtn WXD2_k127_3890768_2 278963.ATWD01000001_gene1659 5.481e-88 307.0 COG1058@1|root,COG1546@1|root,COG1058@2|Bacteria,COG1546@2|Bacteria,3Y466@57723|Acidobacteria,2JHTM@204432|Acidobacteriia 204432|Acidobacteriia S Belongs to the CinA family - - 3.5.1.42 ko:K03742 ko00760,map00760 - R02322 RC00100 ko00000,ko00001,ko01000 - - - CinA,MoCF_biosynth WXD2_k127_3893542_1 1192034.CAP_1602 2.269e-115 381.0 COG1028@1|root,COG1028@2|Bacteria,1MVKN@1224|Proteobacteria 1224|Proteobacteria IQ Dehydrogenase - - - - - - - - - - - - adh_short,adh_short_C2 WXD2_k127_3893542_4 1336208.JADY01000004_gene3760 6.292e-08 65.0 COG3047@1|root,COG3047@2|Bacteria,1NUZJ@1224|Proteobacteria,2TRGI@28211|Alphaproteobacteria,2JZRZ@204441|Rhodospirillales 204441|Rhodospirillales M OmpW family - - - ko:K07275 - - - - ko00000 - - - OmpW WXD2_k127_3893542_0 290397.Adeh_3892 1.563e-287 911.0 COG2366@1|root,COG2366@2|Bacteria,1MVMH@1224|Proteobacteria,42M9A@68525|delta/epsilon subdivisions,2WJ3Y@28221|Deltaproteobacteria,2YUEP@29|Myxococcales 28221|Deltaproteobacteria S Penicillin amidase - - 3.5.1.11 ko:K01434 ko00311,ko01130,map00311,map01130 - R02170 RC00166,RC00328 ko00000,ko00001,ko01000,ko01002 - - - Penicil_amidase WXD2_k127_3893542_2 1305737.JAFX01000001_gene3066 3.639e-71 248.0 COG0778@1|root,COG0778@2|Bacteria,4NFJK@976|Bacteroidetes,47KJ2@768503|Cytophagia 976|Bacteroidetes C Nitroreductase family - - - - - - - - - - - - Nitroreductase WXD2_k127_3893542_6 1382356.JQMP01000003_gene2474 6.235e-05 51.0 COG0653@1|root,COG0653@2|Bacteria,2G603@200795|Chloroflexi,27XJU@189775|Thermomicrobia 189775|Thermomicrobia U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane secA - - ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4 - - SEC-C,SecA_DEAD,SecA_PP_bind,SecA_SW WXD2_k127_3893542_5 465817.ETA_05480 9.38e-07 62.0 COG5492@1|root,COG5492@2|Bacteria,1RHNB@1224|Proteobacteria,1S6TS@1236|Gammaproteobacteria 1236|Gammaproteobacteria N domain, Protein - - - - - - - - - - - - - WXD2_k127_3893542_3 1458275.AZ34_13670 3.127e-14 76.0 COG2199@1|root,COG3706@2|Bacteria,1R7HC@1224|Proteobacteria,2WGYZ@28216|Betaproteobacteria,4AK44@80864|Comamonadaceae 28216|Betaproteobacteria T diguanylate cyclase - - - - - - - - - - - - GGDEF,SBP_bac_3 WXD2_k127_3907859_0 1538295.JY96_08700 1.817e-60 214.0 COG0557@1|root,COG0557@2|Bacteria,1MUS6@1224|Proteobacteria,2VHBJ@28216|Betaproteobacteria,1KJ8G@119065|unclassified Burkholderiales 28216|Betaproteobacteria J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs - - 3.1.13.1 ko:K01147 - - - - ko00000,ko01000,ko03016 - - - RNB WXD2_k127_3907859_2 266940.Krad_0533 2.074e-42 177.0 COG1984@1|root,COG2049@1|root,COG1984@2|Bacteria,COG2049@2|Bacteria,2GITH@201174|Actinobacteria 201174|Actinobacteria E allophanate hydrolase subunit 2 - - - - - - - - - - - - CT_A_B,CT_C_D WXD2_k127_3907859_5 1267535.KB906767_gene3672 7.036e-13 80.0 2E93F@1|root,333CD@2|Bacteria,3Y9CR@57723|Acidobacteria,2JP6M@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - WXD2_k127_3907859_1 357808.RoseRS_1980 5.881e-53 194.0 COG2096@1|root,COG2096@2|Bacteria,2G6TB@200795|Chloroflexi,3777D@32061|Chloroflexia 32061|Chloroflexia S PFAM cobalamin adenosyltransferase - - 2.5.1.17 ko:K00798 ko00860,ko01100,map00860,map01100 M00122 R01492,R05220,R07268 RC00533 ko00000,ko00001,ko00002,ko01000 - - - Cob_adeno_trans WXD2_k127_3907859_3 404589.Anae109_1476 4.751e-38 163.0 COG0784@1|root,COG0784@2|Bacteria,1QYG7@1224|Proteobacteria,43E8C@68525|delta/epsilon subdivisions,2X7NA@28221|Deltaproteobacteria,2Z11B@29|Myxococcales 28221|Deltaproteobacteria T cheY-homologous receiver domain - - - - - - - - - - - - Response_reg WXD2_k127_3907859_4 479431.Namu_3752 2.053e-22 107.0 COG0584@1|root,COG0584@2|Bacteria,2GNM5@201174|Actinobacteria,4EWER@85013|Frankiales 201174|Actinobacteria C Glycerophosphoryl diester phosphodiesterase family - - 3.1.4.46 ko:K01126 ko00564,map00564 - R01030,R01470 RC00017,RC00425 ko00000,ko00001,ko01000 - - - DUF1080,GDPD WXD2_k127_3913822_1 861299.J421_1003 7.568e-108 370.0 COG3307@1|root,COG3307@2|Bacteria 2|Bacteria M -O-antigen - - - - - - - - - - - - Wzy_C WXD2_k127_3913822_5 588932.JHOF01000023_gene2036 1.597e-13 79.0 COG4566@1|root,COG4566@2|Bacteria,1N6WR@1224|Proteobacteria,2TUND@28211|Alphaproteobacteria,2KGU6@204458|Caulobacterales 204458|Caulobacterales K helix_turn_helix, Lux Regulon - - - ko:K14987 ko02020,map02020 M00524 - - ko00000,ko00001,ko00002,ko02022 - - - GerE,Response_reg WXD2_k127_3913822_3 278963.ATWD01000001_gene2665 1.794e-27 130.0 COG0640@1|root,COG0640@2|Bacteria,3Y7J1@57723|Acidobacteria,2JMRU@204432|Acidobacteriia 204432|Acidobacteriia K helix_turn_helix, Arsenical Resistance Operon Repressor - - - ko:K03892 - - - - ko00000,ko03000 - - - HTH_5 WXD2_k127_3913822_0 1340493.JNIF01000004_gene652 1.309e-244 768.0 COG2274@1|root,COG2274@2|Bacteria 2|Bacteria V protein secretion by the type I secretion system - - - ko:K11085 ko02010,map02010 - - - ko00000,ko00001,ko01000,ko02000 3.A.1.106 - - ABC_membrane,ABC_tran WXD2_k127_3913822_2 518766.Rmar_2222 2.397e-95 337.0 COG0460@1|root,COG0527@1|root,COG0460@2|Bacteria,COG0527@2|Bacteria,4NFGR@976|Bacteroidetes,1FIND@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes E homoserine dehydrogenase - - 1.1.1.3,2.7.2.4 ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00017,M00018,M00526,M00527 R00480,R01773,R01775 RC00002,RC00043,RC00087 ko00000,ko00001,ko00002,ko01000 - - - Homoserine_dh,NAD_binding_3 WXD2_k127_3913822_4 1337936.IJ00_09740 1.799e-23 103.0 COG2021@1|root,COG2021@2|Bacteria,1G4G5@1117|Cyanobacteria,1HM4T@1161|Nostocales 1117|Cyanobacteria E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine metXA - 2.3.1.31 ko:K00641 ko00270,ko01100,ko01130,map00270,map01100,map01130 - R01776 RC00004,RC00041 ko00000,ko00001,ko01000 - - - Abhydrolase_1 WXD2_k127_3922520_3 502025.Hoch_1931 1.34e-72 255.0 COG1640@1|root,COG1640@2|Bacteria,1QTVJ@1224|Proteobacteria,42PZB@68525|delta/epsilon subdivisions,2WK77@28221|Deltaproteobacteria,2YVA7@29|Myxococcales 28221|Deltaproteobacteria G 4-alpha-glucanotransferase malQ - 2.4.1.25 ko:K00705 ko00500,ko01100,map00500,map01100 - R05196 RC00049 ko00000,ko00001,ko01000 - GH77 - Glyco_hydro_77 WXD2_k127_3922520_0 1173022.Cri9333_4060 3.955e-293 921.0 COG0296@1|root,COG0296@2|Bacteria,1GD05@1117|Cyanobacteria,1HEAH@1150|Oscillatoriales 1117|Cyanobacteria G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position - - 2.4.1.18 ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 M00565 R02110 - ko00000,ko00001,ko00002,ko01000,ko04147 - CBM48,GH13 - Alpha-amylase,Alpha-amylase_C,CBM_48 WXD2_k127_3922520_1 118168.MC7420_3794 1.462e-194 631.0 COG0296@1|root,COG0296@2|Bacteria,1G0N3@1117|Cyanobacteria,1H6Z3@1150|Oscillatoriales 1117|Cyanobacteria G 4-alpha-D-((1- 4)-alpha-D-glucano)trehalose trehalohydrolase treZ - 3.2.1.141 ko:K01236 ko00500,ko01100,ko01110,map00500,map01100,map01110 M00565 R09995,R11256 RC00049 ko00000,ko00001,ko00002,ko01000 - CBM48,GH13 - Alpha-amylase,CBM_48,DUF3459 WXD2_k127_3922520_2 264732.Moth_1811 4.21e-133 440.0 COG3280@1|root,COG3280@2|Bacteria,1UERK@1239|Firmicutes,25JR7@186801|Clostridia,42HXY@68295|Thermoanaerobacterales 186801|Clostridia G Alpha amylase, catalytic domain - - 5.4.99.15 ko:K06044 ko00500,ko01100,ko01110,map00500,map01100,map01110 M00565 R01824,R09995 - ko00000,ko00001,ko00002,ko01000 - GH13 - Alpha-amylase WXD2_k127_3922610_2 1183438.GKIL_2152 2.059e-58 210.0 COG1228@1|root,COG1228@2|Bacteria 2|Bacteria Q imidazolonepropionase activity - - - - - - - - - - - - Amidohydro_1 WXD2_k127_3922610_0 1300345.LF41_1080 1.149e-153 502.0 COG0457@1|root,COG0457@2|Bacteria,1N0A9@1224|Proteobacteria,1RZSZ@1236|Gammaproteobacteria,1XA6G@135614|Xanthomonadales 135614|Xanthomonadales S COG0457 FOG TPR repeat - - - - - - - - - - - - - WXD2_k127_3922610_1 471854.Dfer_1553 2.488e-94 319.0 COG4912@1|root,COG4912@2|Bacteria,4NKAY@976|Bacteroidetes,47SNY@768503|Cytophagia 976|Bacteroidetes L DNA alkylation repair enzyme - - - - - - - - - - - - DNA_alkylation WXD2_k127_3922610_4 234267.Acid_4769 6.556e-35 135.0 29WUP@1|root,30IG4@2|Bacteria,3Y82K@57723|Acidobacteria 57723|Acidobacteria S ASCH - - - - - - - - - - - - - WXD2_k127_3922610_3 682795.AciX8_1098 1.071e-37 151.0 2CB8S@1|root,30PE6@2|Bacteria,3Y753@57723|Acidobacteria,2JKGU@204432|Acidobacteriia 204432|Acidobacteriia S Protein of unknown function (DUF4199) - - - - - - - - - - - - DUF4199 WXD2_k127_3922610_5 1121035.AUCH01000007_gene530 7.057e-09 65.0 COG1266@1|root,COG1266@2|Bacteria,1QVRB@1224|Proteobacteria 1224|Proteobacteria S CAAX protease self-immunity - - - - - - - - - - - - Abi WXD2_k127_3929948_4 439497.RR11_1213 1.733e-08 60.0 COG2335@1|root,COG2335@2|Bacteria,1RD06@1224|Proteobacteria,2U7H5@28211|Alphaproteobacteria,4NC28@97050|Ruegeria 28211|Alphaproteobacteria M Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - - - - - - - - - - Fasciclin WXD2_k127_3929948_0 204669.Acid345_3046 5.812e-70 243.0 COG0662@1|root,COG1396@1|root,COG0662@2|Bacteria,COG1396@2|Bacteria,3Y59G@57723|Acidobacteria,2JJNY@204432|Acidobacteriia 204432|Acidobacteriia K Helix-turn-helix XRE-family like proteins - - - - - - - - - - - - Cupin_2,HTH_31 WXD2_k127_3929948_2 1380347.JNII01000009_gene2064 3.19e-59 220.0 COG2085@1|root,COG2085@2|Bacteria,2GJF5@201174|Actinobacteria,4EUYE@85013|Frankiales 201174|Actinobacteria S NADP oxidoreductase coenzyme F420-dependent - - 1.5.1.40 ko:K06988 - - - - ko00000,ko01000 - - - F420_oxidored WXD2_k127_3929948_1 1254432.SCE1572_17295 4.057e-63 235.0 COG0642@1|root,COG0784@1|root,COG3437@1|root,COG0784@2|Bacteria,COG2205@2|Bacteria,COG3437@2|Bacteria,1NRP8@1224|Proteobacteria 1224|Proteobacteria T Histidine kinase - - 2.1.1.80,3.1.1.61 ko:K13924 ko02020,ko02030,map02020,map02030 M00506 - - ko00000,ko00001,ko00002,ko01000,ko02022,ko02035 - - - GAF,GAF_2,HATPase_c,HisKA,PAS_3,PAS_4,Response_reg WXD2_k127_3929948_3 396588.Tgr7_2041 4.383e-25 110.0 COG3476@1|root,COG3476@2|Bacteria,1MZC1@1224|Proteobacteria,1S879@1236|Gammaproteobacteria 1236|Gammaproteobacteria T TspO/MBR family - - - ko:K05770 ko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166 - - - ko00000,ko00001,ko02000 9.A.24 - - TspO_MBR WXD2_k127_3933522_0 1123368.AUIS01000044_gene15 2.326e-190 602.0 COG1502@1|root,COG1502@2|Bacteria,1MWUW@1224|Proteobacteria,1RPQG@1236|Gammaproteobacteria,2ND0X@225057|Acidithiobacillales 225057|Acidithiobacillales I Phospholipase D Transphosphatidylase - - - ko:K06131 ko00564,ko01100,map00564,map01100 - R07390 RC00017 ko00000,ko00001,ko01000 - - - PLDc_2 WXD2_k127_3933522_1 525904.Tter_1235 2.642e-26 121.0 COG0628@1|root,COG0628@2|Bacteria,2NPIB@2323|unclassified Bacteria 2|Bacteria S AI-2E family transporter yueF GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - ko:K03548 - - - - ko00000,ko02000 2.A.86.1 - - AI-2E_transport WXD2_k127_3936336_5 1265505.ATUG01000001_gene2911 1.517e-17 95.0 COG4663@1|root,COG4663@2|Bacteria,1MVMD@1224|Proteobacteria,42NEN@68525|delta/epsilon subdivisions,2WK9G@28221|Deltaproteobacteria,2MJ7P@213118|Desulfobacterales 28221|Deltaproteobacteria Q Bacterial extracellular solute-binding protein, family 7 - - - - - - - - - - - - DctP WXD2_k127_3936336_4 246197.MXAN_2999 4.602e-24 115.0 COG1496@1|root,COG1496@2|Bacteria,1MW2H@1224|Proteobacteria,42SE9@68525|delta/epsilon subdivisions,2WMQE@28221|Deltaproteobacteria,2YVJ7@29|Myxococcales 28221|Deltaproteobacteria S Belongs to the multicopper oxidase YfiH RL5 family - - - ko:K05810 - - - - ko00000,ko01000 - - - Cu-oxidase_4 WXD2_k127_3936336_1 1123368.AUIS01000005_gene382 2.277e-116 398.0 COG0744@1|root,COG0744@2|Bacteria,1QTST@1224|Proteobacteria,1RNHV@1236|Gammaproteobacteria 1236|Gammaproteobacteria M Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) mrcB GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008289,GO:0008360,GO:0008658,GO:0008955,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031406,GO:0031975,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042277,GO:0042546,GO:0042597,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071704,GO:0071723,GO:0071840,GO:0071944,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 2.4.1.129,3.4.16.4 ko:K05365 ko00550,map00550 - R04519 RC00005,RC00049 ko00000,ko00001,ko01000,ko01003,ko01011 - GT51 iECIAI39_1322.ECIAI39_0153,iSBO_1134.SBO_0138,iSbBS512_1146.SbBS512_E0140,iYL1228.KPN_00164 PBP1_TM,Transgly,Transpeptidase,UB2H WXD2_k127_3936336_3 671143.DAMO_2095 3.092e-25 113.0 COG0744@1|root,COG0744@2|Bacteria,2NNMB@2323|unclassified Bacteria 2|Bacteria M Transglycosylase mrcB - 2.4.1.129,3.4.16.4 ko:K05365,ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 - R04519 RC00005,RC00049 ko00000,ko00001,ko01000,ko01003,ko01011 - GT51 - Transgly,Transpeptidase,UB2H WXD2_k127_3936336_2 1121920.AUAU01000016_gene1320 6.469e-67 245.0 COG0515@1|root,COG0515@2|Bacteria,3Y6A7@57723|Acidobacteria 57723|Acidobacteria KLT Protein tyrosine kinase - - - - - - - - - - - - PD40,Pkinase WXD2_k127_3936336_0 497964.CfE428DRAFT_0230 5.163e-154 512.0 COG0642@1|root,COG5002@1|root,COG0642@2|Bacteria,COG2205@2|Bacteria,COG5002@2|Bacteria,46TGZ@74201|Verrucomicrobia 74201|Verrucomicrobia T histidine kinase A domain protein - - - - - - - - - - - - HATPase_c,HisKA,Response_reg WXD2_k127_3940282_0 570952.ATVH01000014_gene1836 2.693e-144 476.0 COG3258@1|root,COG3258@2|Bacteria,1QW7R@1224|Proteobacteria,2U26W@28211|Alphaproteobacteria 28211|Alphaproteobacteria C Cytochrome c - - - - - - - - - - - - - WXD2_k127_3940282_2 1121920.AUAU01000014_gene2778 9.784e-72 247.0 COG0262@1|root,COG0262@2|Bacteria,3Y4XB@57723|Acidobacteria 57723|Acidobacteria H RibD C-terminal domain - - - - - - - - - - - - RibD_C WXD2_k127_3940282_3 179408.Osc7112_3205 6.093e-13 84.0 COG2931@1|root,COG2931@2|Bacteria,1G0DX@1117|Cyanobacteria 1117|Cyanobacteria Q COG2931 RTX toxins and related Ca2 -binding - - - - - - - - - - - - Cadherin_3,DUF4347,HemolysinCabind,Laminin_G_3,VCBS WXD2_k127_3940282_1 760192.Halhy_5656 8.908e-75 287.0 COG2373@1|root,COG3291@1|root,COG4386@1|root,COG4409@1|root,COG2373@2|Bacteria,COG3291@2|Bacteria,COG4386@2|Bacteria,COG4409@2|Bacteria,4NDZC@976|Bacteroidetes,1IR0W@117747|Sphingobacteriia 976|Bacteroidetes G Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - - - - - - - - - - CHU_C,PKD,SASA,SprB WXD2_k127_3946575_4 96561.Dole_1093 1.496e-21 101.0 COG0642@1|root,COG0784@1|root,COG2202@1|root,COG2203@1|root,COG3614@1|root,COG4564@1|root,COG5000@1|root,COG0784@2|Bacteria,COG2202@2|Bacteria,COG2203@2|Bacteria,COG2205@2|Bacteria,COG3614@2|Bacteria,COG4564@2|Bacteria,COG5000@2|Bacteria,1NRP8@1224|Proteobacteria,42M0Y@68525|delta/epsilon subdivisions,2WJCX@28221|Deltaproteobacteria 28221|Deltaproteobacteria T Histidine kinase A domain protein - - - - - - - - - - - - 7TMR-DISMED2,7TMR-DISM_7TM,CHASE,GAF,GAF_2,HATPase_c,HisKA,PAS,PAS_4,PAS_9,Response_reg WXD2_k127_3946575_2 1121013.P873_01295 1.431e-45 190.0 COG2199@1|root,COG3292@1|root,COG3292@2|Bacteria,COG3706@2|Bacteria,1R7HC@1224|Proteobacteria,1RQCR@1236|Gammaproteobacteria,1X4SZ@135614|Xanthomonadales 135614|Xanthomonadales T diguanylate cyclase - - - - - - - - - - - - GGDEF,Reg_prop,Y_Y_Y WXD2_k127_3946575_3 382464.ABSI01000011_gene2329 7.212e-43 168.0 COG4076@1|root,COG4076@2|Bacteria,46W2E@74201|Verrucomicrobia 74201|Verrucomicrobia J Ribosomal protein L11 methyltransferase (PrmA) - - 2.1.1.319 ko:K11434 ko04068,ko04922,map04068,map04922 - R11216,R11217,R11219 RC00003,RC02120,RC03388,RC03390 ko00000,ko00001,ko01000,ko03036 - - - PrmA WXD2_k127_3946575_1 926550.CLDAP_07830 1.222e-93 338.0 COG4447@1|root,COG4447@2|Bacteria,2G66V@200795|Chloroflexi 200795|Chloroflexi G glycosyl hydrolase, BNR repeat-containing protein - - - - - - - - - - - - Sortilin-Vps10 WXD2_k127_3946575_0 604331.AUHY01000040_gene92 9.442e-183 586.0 COG0554@1|root,COG0554@2|Bacteria,1WI6Q@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus C Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate glpK GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 - R00847 RC00002,RC00017 ko00000,ko00001,ko01000,ko04147 - - - FGGY_C,FGGY_N WXD2_k127_3946575_5 652103.Rpdx1_2331 1.284e-12 81.0 COG3468@1|root,COG3468@2|Bacteria,1QUZ3@1224|Proteobacteria,2U1BI@28211|Alphaproteobacteria,3JVY2@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria MU ig-like, plexins, transcription factors - - - - - - - - - - - - Autotransporter,TIG WXD2_k127_3950294_2 452637.Oter_0623 4.393e-55 198.0 COG3428@1|root,COG3428@2|Bacteria,46VXR@74201|Verrucomicrobia 74201|Verrucomicrobia S Bacterial PH domain - - - ko:K08981 - - - - ko00000 - - - bPH_2 WXD2_k127_3950294_3 452637.Oter_0624 1.972e-45 180.0 COG3428@1|root,COG3428@2|Bacteria,46VTZ@74201|Verrucomicrobia 74201|Verrucomicrobia S Bacterial PH domain - - - - - - - - - - - - bPH_2 WXD2_k127_3950294_7 1007103.AFHW01000055_gene3990 1.825e-10 74.0 COG2755@1|root,COG4932@1|root,COG2755@2|Bacteria,COG4932@2|Bacteria,1V8BC@1239|Firmicutes,4I1I4@91061|Bacilli,26TUH@186822|Paenibacillaceae 91061|Bacilli EN Carboxypeptidase regulatory-like domain - - - - - - - - - - - - Big_2,CarbopepD_reg_2,CarboxypepD_reg,Glug,He_PIG,SLH WXD2_k127_3950294_1 1157490.EL26_19350 3.648e-125 431.0 COG5001@1|root,COG5001@2|Bacteria,1TP8V@1239|Firmicutes,4HA3G@91061|Bacilli,2798R@186823|Alicyclobacillaceae 91061|Bacilli T Putative diguanylate phosphodiesterase - - 2.7.7.65 ko:K21023 ko02025,map02025 - - - ko00000,ko00001,ko01000 - - - EAL,GGDEF,HAMP,MHYT,PAS,PAS_3,PAS_4,PAS_9 WXD2_k127_3950294_5 234267.Acid_1421 1.709e-36 160.0 COG1807@1|root,COG1807@2|Bacteria,3Y2T0@57723|Acidobacteria 2|Bacteria M PFAM glycosyl transferase family 39 - - - ko:K14340 - - - - ko00000,ko01000,ko01003 - - - PMT_2 WXD2_k127_3950294_0 1379698.RBG1_1C00001G0805 9.724e-194 616.0 COG1012@1|root,COG1012@2|Bacteria,2NNWB@2323|unclassified Bacteria 2|Bacteria C Belongs to the aldehyde dehydrogenase family aldH - 1.2.1.3 ko:K00128,ko:K00138 ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130 M00135 R00264,R00631,R00710,R00711,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146 RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500 ko00000,ko00001,ko00002,ko01000 - - - Aldedh WXD2_k127_3950294_4 234267.Acid_1421 6.771e-44 180.0 COG1807@1|root,COG1807@2|Bacteria,3Y2T0@57723|Acidobacteria 2|Bacteria M PFAM glycosyl transferase family 39 - - - ko:K14340 - - - - ko00000,ko01000,ko01003 - - - PMT_2 WXD2_k127_3950294_6 588932.JHOF01000028_gene1791 7.908e-13 73.0 COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,1MU9K@1224|Proteobacteria,2TTJG@28211|Alphaproteobacteria,2KK1P@204458|Caulobacterales 204458|Caulobacterales P TonB dependent receptor - - - - - - - - - - - - Plug,TonB_dep_Rec WXD2_k127_3955285_0 1128421.JAGA01000001_gene2399 8.28e-166 531.0 COG0179@1|root,COG0179@2|Bacteria 2|Bacteria Q Fumarylacetoacetate (FAA) hydrolase fahA - 3.7.1.2 ko:K01555 ko00350,ko00643,ko01100,ko01120,map00350,map00643,map01100,map01120 M00044 R01364 RC00326,RC00446 ko00000,ko00001,ko00002,ko01000,ko04147 - - iJN746.PP_4620 FAA_hydrolase,FAA_hydrolase_N WXD2_k127_3955285_1 575540.Isop_0232 3.095e-19 101.0 COG0823@1|root,COG0823@2|Bacteria,2IXGY@203682|Planctomycetes 203682|Planctomycetes U Periplasmic component of the Tol biopolymer transport - - - ko:K03641 - - - - ko00000,ko02000 2.C.1.2 - - PD40,PDZ_2,Peptidase_M28 WXD2_k127_3957972_0 861299.J421_3038 4.57e-130 449.0 COG0308@1|root,COG0823@1|root,COG0308@2|Bacteria,COG0823@2|Bacteria 2|Bacteria U Involved in the tonB-independent uptake of proteins VVA0929 - 3.4.11.2 ko:K01256,ko:K03641 ko00480,ko01100,map00480,map01100 - R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002,ko02000 2.C.1.2 - - PD40,Peptidase_MA_2 WXD2_k127_3957972_1 998674.ATTE01000001_gene987 6.871e-36 149.0 2DBAY@1|root,2Z84S@2|Bacteria,1R7V4@1224|Proteobacteria,1S1T1@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Domain of unknown function (DUF1835) - - - - - - - - - - - - DUF1835 WXD2_k127_3957972_2 439481.Aboo_0221 1.443e-17 97.0 COG1073@1|root,arCOG01651@2157|Archaea 439481.Aboo_0221|- S Alpha beta - - - - - - - - - - - - - WXD2_k127_3962539_1 1449049.JONW01000005_gene1937 1.971e-13 81.0 COG1216@1|root,COG1216@2|Bacteria,1R6SJ@1224|Proteobacteria,2U47V@28211|Alphaproteobacteria,2KFG0@204458|Caulobacterales 204458|Caulobacterales M PFAM Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 WXD2_k127_3962539_0 1210884.HG799463_gene9356 3.466e-130 460.0 COG3292@1|root,COG4191@1|root,COG3292@2|Bacteria,COG4191@2|Bacteria,2J2QP@203682|Planctomycetes 203682|Planctomycetes T Y_Y_Y domain - - - - - - - - - - - - HATPase_c,Reg_prop,Y_Y_Y WXD2_k127_3968881_6 56780.SYN_00410 9.265e-86 291.0 COG1127@1|root,COG1127@2|Bacteria,1MUSD@1224|Proteobacteria,42NI4@68525|delta/epsilon subdivisions,2WKRT@28221|Deltaproteobacteria,2MQE7@213462|Syntrophobacterales 28221|Deltaproteobacteria Q PFAM ABC transporter - - - ko:K02065 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - ABC_tran WXD2_k127_3968881_7 244581.IM40_04645 6.585e-76 263.0 COG0767@1|root,COG0767@2|Bacteria,1MVPN@1224|Proteobacteria,2TSGS@28211|Alphaproteobacteria,47F1E@766|Rickettsiales 766|Rickettsiales Q ABC transporter, permease protein - - - ko:K02066 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - MlaE WXD2_k127_3968881_4 867903.ThesuDRAFT_02308 2.663e-98 334.0 COG0787@1|root,COG0787@2|Bacteria,1TNYY@1239|Firmicutes,2480T@186801|Clostridia,3WCG8@538999|Clostridiales incertae sedis 186801|Clostridia M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids alr - 5.1.1.1 ko:K01775 ko00473,ko01100,ko01502,map00473,map01100,map01502 - R00401 RC00285 ko00000,ko00001,ko01000,ko01011 - - - Ala_racemase_C,Ala_racemase_N WXD2_k127_3968881_11 485913.Krac_12259 3.901e-46 177.0 COG1028@1|root,COG1028@2|Bacteria,2G8G1@200795|Chloroflexi 485913.Krac_12259|- IQ Short-chain dehydrogenase reductase SDR - - - - - - - - - - - - - WXD2_k127_3968881_12 675816.VIA_000710 1.219e-43 169.0 COG3748@1|root,COG3748@2|Bacteria,1MWHB@1224|Proteobacteria,1RRV4@1236|Gammaproteobacteria,1XUPI@135623|Vibrionales 135623|Vibrionales S Urate oxidase N-terminal - - - - - - - - - - - - Urate_ox_N WXD2_k127_3968881_2 944481.JAFP01000001_gene42 5.264e-112 371.0 COG0232@1|root,COG0232@2|Bacteria,1MVQ2@1224|Proteobacteria,42P1T@68525|delta/epsilon subdivisions,2WKZB@28221|Deltaproteobacteria,2M6WN@213113|Desulfurellales 28221|Deltaproteobacteria F Phosphohydrolase-associated domain - - 3.1.5.1 ko:K01129 ko00230,map00230 - R01856 RC00017 ko00000,ko00001,ko01000 - - - HD,HD_assoc WXD2_k127_3968881_15 762982.HMPREF9442_01484 1.787e-19 92.0 COG0776@1|root,COG0776@2|Bacteria,4NSK6@976|Bacteroidetes,2FTWW@200643|Bacteroidia 976|Bacteroidetes L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions hupB - - ko:K03530 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding WXD2_k127_3968881_0 247490.KSU1_C0337 1.535e-191 629.0 COG3387@1|root,COG3387@2|Bacteria,2J1PN@203682|Planctomycetes 2|Bacteria G Glycosyl hydrolases family 15 - - - - - - - - - - - - Glyco_hydro_15 WXD2_k127_3968881_10 1267535.KB906767_gene2259 5.678e-53 203.0 COG0144@1|root,COG0781@1|root,COG0144@2|Bacteria,COG0781@2|Bacteria,3Y2NW@57723|Acidobacteria,2JHNM@204432|Acidobacteriia 204432|Acidobacteriia JK Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family - - 2.1.1.176 ko:K03500 - - - - ko00000,ko01000,ko03009 - - - Methyltr_RsmB-F,NusB WXD2_k127_3968881_8 1254432.SCE1572_30420 8.607e-74 259.0 COG0223@1|root,COG0223@2|Bacteria,1MU4Q@1224|Proteobacteria,42M3E@68525|delta/epsilon subdivisions,2WKMK@28221|Deltaproteobacteria,2YUSE@29|Myxococcales 28221|Deltaproteobacteria J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus fmt - 2.1.2.9 ko:K00604 ko00670,ko00970,map00670,map00970 - R03940 RC00026,RC00165 ko00000,ko00001,ko01000 - - - Formyl_trans_C,Formyl_trans_N WXD2_k127_3968881_17 234267.Acid_7493 1.509e-06 62.0 COG1807@1|root,COG1807@2|Bacteria 2|Bacteria M 4-amino-4-deoxy-L-arabinose transferase activity - - - - - - - - - - - - PMT_2 WXD2_k127_3968881_1 667014.Thein_0873 1.987e-132 451.0 COG0007@1|root,COG1587@1|root,COG0007@2|Bacteria,COG1587@2|Bacteria,2GH4Q@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria H Belongs to the precorrin methyltransferase family - - 2.1.1.107,4.2.1.75 ko:K13542 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R03165,R03194 RC00003,RC00871,RC01861 ko00000,ko00001,ko00002,ko01000 - - - HEM4,TP_methylase WXD2_k127_3968881_9 123214.PERMA_0444 1.457e-65 244.0 COG0181@1|root,COG0181@2|Bacteria,2G3T1@200783|Aquificae 200783|Aquificae H Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps hemC GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 ko:K01749 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R00084 RC02317 ko00000,ko00001,ko00002,ko01000 - - - Porphobil_deam,Porphobil_deamC WXD2_k127_3968881_3 760568.Desku_1522 7.358e-101 353.0 COG0373@1|root,COG0373@2|Bacteria,1TQN9@1239|Firmicutes,2496M@186801|Clostridia,2611X@186807|Peptococcaceae 186801|Clostridia H Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) hemA - 1.2.1.70 ko:K02492 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R04109 RC00055,RC00149 ko00000,ko00001,ko00002,ko01000 - - - GlutR_N,GlutR_dimer,Shikimate_DH WXD2_k127_3968881_14 443143.GM18_3974 1.267e-25 121.0 COG0755@1|root,COG0755@2|Bacteria,1RCCI@1224|Proteobacteria,42PVM@68525|delta/epsilon subdivisions,2WJ7I@28221|Deltaproteobacteria,43TXA@69541|Desulfuromonadales 28221|Deltaproteobacteria O PFAM cytochrome c assembly protein - - - - - - - - - - - - Cytochrom_C_asm WXD2_k127_3968881_13 1232410.KI421421_gene3682 6.325e-39 151.0 COG0454@1|root,COG0456@2|Bacteria,1NEWG@1224|Proteobacteria,42VG1@68525|delta/epsilon subdivisions,2WRCC@28221|Deltaproteobacteria,43UQR@69541|Desulfuromonadales 28221|Deltaproteobacteria K Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_1,Acetyltransf_7 WXD2_k127_3968881_5 945713.IALB_2869 8.621e-98 334.0 COG2262@1|root,COG2262@2|Bacteria 2|Bacteria O GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis hflX - - ko:K03665 - - - - ko00000,ko03009 - - - GTP-bdg_M,GTP-bdg_N,MMR_HSR1 WXD2_k127_3978343_2 1906.SFRA_03260 1.197e-22 109.0 COG0398@1|root,COG0398@2|Bacteria,2GN68@201174|Actinobacteria 201174|Actinobacteria S Pfam SNARE associated Golgi protein - - - - - - - - - - - - SNARE_assoc WXD2_k127_3978343_4 639282.DEFDS_1724 0.0005362 51.0 COG4796@1|root,COG4796@2|Bacteria,2GEUH@200930|Deferribacteres 200930|Deferribacteres U Bacterial type II and III secretion system protein - - - ko:K02666 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - AMIN,Secretin,Secretin_N WXD2_k127_3978343_0 997346.HMPREF9374_0789 4.071e-139 453.0 COG0183@1|root,COG0183@2|Bacteria,1TP07@1239|Firmicutes,4H9RJ@91061|Bacilli,27BB2@186824|Thermoactinomycetaceae 91061|Bacilli I Thiolase, C-terminal domain - - 2.3.1.9 ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 M00088,M00095,M00373,M00374,M00375 R00238,R01177 RC00004,RC00326 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Thiolase_C,Thiolase_N WXD2_k127_3978343_1 1340493.JNIF01000003_gene2959 1.033e-23 115.0 COG1266@1|root,COG1266@2|Bacteria,3Y4ED@57723|Acidobacteria 57723|Acidobacteria S PFAM Abortive infection protein - - - ko:K07052 - - - - ko00000 - - - Abi WXD2_k127_3978343_3 146891.A9601_15611 2.403e-10 67.0 COG2259@1|root,COG2259@2|Bacteria,1G62K@1117|Cyanobacteria,1MKD8@1212|Prochloraceae 1117|Cyanobacteria S membrane protein (COG2259) - - - ko:K15977 - - - - ko00000 - - - DoxX WXD2_k127_3979781_3 234267.Acid_5940 7.377e-43 165.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,3Y2PK@57723|Acidobacteria 57723|Acidobacteria KLTU WD40 domain protein beta Propeller - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase WXD2_k127_3979781_6 247490.KSU1_D0738 3.472e-08 64.0 COG0589@1|root,COG0589@2|Bacteria 2|Bacteria T AMP binding - - - - - - - - - - - - Usp WXD2_k127_3979781_5 329726.AM1_3539 5.111e-17 92.0 2DBZS@1|root,2ZC3A@2|Bacteria,1G58M@1117|Cyanobacteria 1117|Cyanobacteria S Putative bacterial sensory transduction regulator - - - - - - - - - - - - YbjN WXD2_k127_3979781_2 1437425.CSEC_0544 1.278e-88 306.0 COG1092@1|root,COG1092@2|Bacteria,2JGMG@204428|Chlamydiae 204428|Chlamydiae J S-adenosylmethionine-dependent methyltransferase rlmI - 2.1.1.191 ko:K06969 - - - - ko00000,ko01000,ko03009 - - - Methyltrans_SAM WXD2_k127_3979781_1 443143.GM18_0801 1.048e-192 618.0 COG2804@1|root,COG2804@2|Bacteria,1MU7V@1224|Proteobacteria,42M51@68525|delta/epsilon subdivisions,2WIVD@28221|Deltaproteobacteria 28221|Deltaproteobacteria NU General secretory system II, protein E domain protein pulE-3 - - ko:K02454 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - T2SSE,T2SSE_N WXD2_k127_3979781_4 313625.BL107_06574 3.156e-23 105.0 COG0724@1|root,COG0724@2|Bacteria,1GJE2@1117|Cyanobacteria,1GYTS@1129|Synechococcus 1117|Cyanobacteria S RNA-binding - - - - - - - - - - - - RRM_1 WXD2_k127_3979781_0 1379281.AVAG01000021_gene1108 8.712e-201 651.0 COG2804@1|root,COG2804@2|Bacteria,1MU7V@1224|Proteobacteria,42M51@68525|delta/epsilon subdivisions,2WIPP@28221|Deltaproteobacteria,2M915@213115|Desulfovibrionales 28221|Deltaproteobacteria NU PFAM Type II secretion system protein E gspE - - ko:K02454 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - GAF,T2SSE,T2SSE_N WXD2_k127_3991338_2 666686.B1NLA3E_20245 0.0006157 42.0 arCOG12631@1|root,3172B@2|Bacteria,1V77G@1239|Firmicutes,4HJ0W@91061|Bacilli,1ZH97@1386|Bacillus 91061|Bacilli S Bacterial PH domain yjqA - - - - - - - - - - - bPH_1 WXD2_k127_3991338_0 1192034.CAP_1695 9.746e-121 404.0 COG0436@1|root,COG0436@2|Bacteria,1MW0Z@1224|Proteobacteria,42N1P@68525|delta/epsilon subdivisions,2WM2V@28221|Deltaproteobacteria,2YU4D@29|Myxococcales 28221|Deltaproteobacteria E Aminotransferase - - - ko:K10907 - - - - ko00000,ko01000,ko01007 - - - Aminotran_1_2 WXD2_k127_3991338_1 667014.Thein_0070 2.146e-111 366.0 COG0152@1|root,COG0152@2|Bacteria,2GH07@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria F SAICAR synthetase purC - 6.3.2.6 ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04591 RC00064,RC00162 ko00000,ko00001,ko00002,ko01000 - - - SAICAR_synt WXD2_k127_3995703_9 240015.ACP_2651 3.444e-46 172.0 COG0216@1|root,COG0216@2|Bacteria,3Y2N9@57723|Acidobacteria,2JHYH@204432|Acidobacteriia 204432|Acidobacteriia J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA prfA - - ko:K02835 - - - - ko00000,ko03012 - - - PCRF,RF-1 WXD2_k127_3995703_4 316067.Geob_0684 1.448e-89 309.0 COG3872@1|root,COG3872@2|Bacteria,1RCB0@1224|Proteobacteria,42R3I@68525|delta/epsilon subdivisions,2WMZR@28221|Deltaproteobacteria,43U2U@69541|Desulfuromonadales 28221|Deltaproteobacteria S Protein of unknown function (DUF1385) - - - - - - - - - - - - DUF1385 WXD2_k127_3995703_10 555088.DealDRAFT_1708 3.228e-25 108.0 COG0254@1|root,COG0254@2|Bacteria,1VEGU@1239|Firmicutes,24QNZ@186801|Clostridia,42K5X@68298|Syntrophomonadaceae 186801|Clostridia J Binds the 23S rRNA rpmE - - ko:K02909 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L31 WXD2_k127_3995703_0 1340493.JNIF01000003_gene1743 1.49e-124 406.0 COG0306@1|root,COG0306@2|Bacteria,3Y3ZW@57723|Acidobacteria 57723|Acidobacteria P PFAM phosphate transporter - - - ko:K03306 - - - - ko00000 2.A.20 - - PHO4 WXD2_k127_3995703_8 243231.GSU0388 1.88e-52 203.0 COG1392@1|root,COG1392@2|Bacteria,1R4SP@1224|Proteobacteria,42SPV@68525|delta/epsilon subdivisions,2WPTH@28221|Deltaproteobacteria,43SW8@69541|Desulfuromonadales 28221|Deltaproteobacteria P Protein of unknown function DUF47 - - - ko:K07220 - - - - ko00000 - - - PhoU_div WXD2_k127_3995703_7 1382356.JQMP01000004_gene663 1.814e-52 202.0 COG5002@1|root,COG5002@2|Bacteria,2G67W@200795|Chloroflexi,27XFQ@189775|Thermomicrobia 189775|Thermomicrobia T His Kinase A (phosphoacceptor) domain - - 2.7.13.3 ko:K07636 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HATPase_c,HisKA,PAS WXD2_k127_3995703_6 1280689.AUJC01000004_gene370 5.122e-55 201.0 COG0745@1|root,COG0745@2|Bacteria,1TPWS@1239|Firmicutes,25AZ2@186801|Clostridia,36ESG@31979|Clostridiaceae 186801|Clostridia T PFAM response regulator receiver phoP - - ko:K02483,ko:K07658,ko:K07668 ko02020,map02020 M00434,M00459 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C WXD2_k127_3995703_5 330214.NIDE2416 7.97e-68 237.0 COG0704@1|root,COG0704@2|Bacteria,3J0M6@40117|Nitrospirae 40117|Nitrospirae P Plays a role in the regulation of phosphate uptake phoU - - ko:K02039 - - - - ko00000 - - - PhoU WXD2_k127_3995703_1 1121440.AUMA01000001_gene28 3.58e-109 376.0 COG1117@1|root,COG1117@2|Bacteria,1MU16@1224|Proteobacteria,42MWA@68525|delta/epsilon subdivisions,2WJEX@28221|Deltaproteobacteria,2M7VZ@213115|Desulfovibrionales 28221|Deltaproteobacteria P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system pstB - 3.6.3.27 ko:K02036 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.7 - - ABC_tran WXD2_k127_3995703_2 1278073.MYSTI_05251 3.218e-104 354.0 COG0581@1|root,COG0581@2|Bacteria,1MUWB@1224|Proteobacteria,42MWK@68525|delta/epsilon subdivisions,2WJKH@28221|Deltaproteobacteria,2YVAR@29|Myxococcales 28221|Deltaproteobacteria P Phosphate transport system permease pstA - - ko:K02038 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - BPD_transp_1,DUF3333 WXD2_k127_3995703_3 378806.STAUR_5630 7.619e-100 333.0 COG0573@1|root,COG0573@2|Bacteria,1MVKP@1224|Proteobacteria,42N2N@68525|delta/epsilon subdivisions,2WJJ1@28221|Deltaproteobacteria,2YV6J@29|Myxococcales 28221|Deltaproteobacteria P probably responsible for the translocation of the substrate across the membrane pstC - - ko:K02037 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - BPD_transp_1 WXD2_k127_4000031_0 215803.DB30_2226 4.293e-288 897.0 COG3696@1|root,COG3696@2|Bacteria,1NUIV@1224|Proteobacteria,42M0A@68525|delta/epsilon subdivisions,2WIQY@28221|Deltaproteobacteria,2YTUC@29|Myxococcales 28221|Deltaproteobacteria P Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - ko:K15726 - - - - ko00000,ko02000 2.A.6.1.2 - - ACR_tran WXD2_k127_4000031_2 266264.Rmet_4121 2.896e-45 181.0 COG0845@1|root,COG0845@2|Bacteria,1MVAS@1224|Proteobacteria,2VN6Q@28216|Betaproteobacteria,1K38J@119060|Burkholderiaceae 28216|Betaproteobacteria M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family cusB - - ko:K15727 - - - - ko00000,ko02000 8.A.1.2.1 - - HlyD_D23 WXD2_k127_4000031_4 397945.Aave_1364 1.008e-07 64.0 COG1538@1|root,COG1538@2|Bacteria,1MUA8@1224|Proteobacteria,2VISZ@28216|Betaproteobacteria,4A9ZK@80864|Comamonadaceae 28216|Betaproteobacteria M RND efflux system, outer membrane lipoprotein - - - ko:K18903 - M00698 - - ko00000,ko00002,ko01504,ko02000 1.B.17.3.3 - - OEP WXD2_k127_4000031_1 1396141.BATP01000001_gene5346 8.682e-103 370.0 COG4191@1|root,COG5002@1|root,COG4191@2|Bacteria,COG5002@2|Bacteria,46TN7@74201|Verrucomicrobia,2IVI6@203494|Verrucomicrobiae 203494|Verrucomicrobiae T PAS fold - - - - - - - - - - - - HATPase_c,HisKA,PAS_9,Response_reg WXD2_k127_4000031_3 269796.Rru_A2543 3.139e-16 85.0 COG4251@1|root,COG4251@2|Bacteria,1N1KJ@1224|Proteobacteria,2UD2F@28211|Alphaproteobacteria,2JXKX@204441|Rhodospirillales 204441|Rhodospirillales T KaiB domain - - - ko:K08481 - - - - ko00000 - - - KaiB WXD2_k127_4000031_5 196490.AUEZ01000193_gene4367 0.0003798 44.0 COG5606@1|root,COG5606@2|Bacteria,1QUS2@1224|Proteobacteria,2TX7G@28211|Alphaproteobacteria,3K69R@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria S Transcriptional regulator - - - - - - - - - - - - DUF2384 WXD2_k127_400849_1 398767.Glov_0737 8.582e-86 303.0 COG3829@1|root,COG3829@2|Bacteria,1R63H@1224|Proteobacteria,42PJI@68525|delta/epsilon subdivisions,2WK7M@28221|Deltaproteobacteria 28221|Deltaproteobacteria K Bacterial regulatory protein, Fis family - - - - - - - - - - - - HTH_8,Sigma54_activat WXD2_k127_400849_9 487796.Flav2ADRAFT_1527 5.562e-14 78.0 COG2172@1|root,COG2172@2|Bacteria 2|Bacteria T sigma factor antagonist activity - - 2.7.11.1 ko:K04757 - - - - ko00000,ko01000,ko01001,ko03021 - - - HATPase_c_2 WXD2_k127_400849_8 487796.Flav2ADRAFT_1528 5.956e-20 97.0 COG1366@1|root,COG1366@2|Bacteria 2|Bacteria T antisigma factor binding - - - - - - - - - - - - STAS WXD2_k127_400849_3 880073.Calab_1889 5.892e-51 201.0 COG2203@1|root,COG2208@1|root,COG2203@2|Bacteria,COG2208@2|Bacteria 2|Bacteria T phosphoserine phosphatase activity rsbU - 3.1.3.3,4.6.1.1 ko:K01768,ko:K07315 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000,ko03021 - - - GAF,GAF_2,GAF_3,HATPase_c_2,SSF,SpoIIE WXD2_k127_400849_2 1382304.JNIL01000001_gene2953 7.468e-55 206.0 COG1024@1|root,COG1024@2|Bacteria,1TQ2V@1239|Firmicutes,4HBT0@91061|Bacilli,279HF@186823|Alicyclobacillaceae 91061|Bacilli I Enoyl-CoA hydratase/isomerase paaG - 5.3.3.18 ko:K15866 ko00360,ko01120,map00360,map01120 - R09837,R09839 RC00004,RC00326,RC02689,RC03003 ko00000,ko00001,ko01000 - - - ECH_1 WXD2_k127_400849_10 497964.CfE428DRAFT_0434 1.418e-13 77.0 2C12A@1|root,33B7C@2|Bacteria,46WRM@74201|Verrucomicrobia 74201|Verrucomicrobia - - - - - - - - - - - - - - - WXD2_k127_400849_6 861299.J421_0966 1.714e-24 104.0 2E40T@1|root,32YXK@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_400849_11 497964.CfE428DRAFT_0436 5.984e-06 53.0 2DTUB@1|root,33MNX@2|Bacteria,46WI5@74201|Verrucomicrobia 74201|Verrucomicrobia - - - - - - - - - - - - - - - WXD2_k127_400849_0 671143.DAMO_2498 6.989e-147 474.0 COG1180@1|root,COG1180@2|Bacteria,2NP82@2323|unclassified Bacteria 2|Bacteria O Radical SAM superfamily pflA - 1.97.1.4 ko:K04069 - - R04710 - ko00000,ko01000 - - - Fer4_12,Radical_SAM WXD2_k127_400849_5 330214.NIDE2482 7.214e-25 108.0 COG2146@1|root,COG2146@2|Bacteria,3J1E7@40117|Nitrospirae 40117|Nitrospirae P Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - 1.7.1.15 ko:K00363,ko:K05710 ko00360,ko00910,ko01120,ko01220,map00360,map00910,map01120,map01220 M00530,M00545 R00787,R06782,R06783 RC00098,RC00176 br01602,ko00000,ko00001,ko00002,ko01000 - - - Rieske WXD2_k127_400849_4 240015.ACP_0264 7.201e-42 162.0 COG2945@1|root,COG2945@2|Bacteria,3Y35I@57723|Acidobacteria,2JIVZ@204432|Acidobacteriia 204432|Acidobacteriia - - - - - ko:K07018 - - - - ko00000 - - - Hydrolase_4 WXD2_k127_400849_7 316274.Haur_3896 2.788e-22 100.0 COG0614@1|root,COG0614@2|Bacteria,2G8ZP@200795|Chloroflexi,375F3@32061|Chloroflexia 32061|Chloroflexia P PFAM periplasmic binding protein - - - - - - - - - - - - Peripla_BP_2 WXD2_k127_4010457_0 1192034.CAP_6668 1.836e-32 148.0 COG2236@1|root,COG2236@2|Bacteria 2|Bacteria F xanthine phosphoribosyltransferase activity - - - - - - - - - - - - SIR2_2 WXD2_k127_4039307_0 420324.KI911974_gene3113 0.0 1294.0 COG0376@1|root,COG0376@2|Bacteria,1MUBF@1224|Proteobacteria,2TQJ7@28211|Alphaproteobacteria,1JSVV@119045|Methylobacteriaceae 28211|Alphaproteobacteria P Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity katG - 1.11.1.21 ko:K03782 ko00360,ko00380,ko00940,ko00983,ko01100,ko01110,map00360,map00380,map00940,map00983,map01100,map01110 - R00602,R00698,R02596,R02670,R03919,R04007,R07443,R11906 RC00034,RC00213,RC00767,RC02141 ko00000,ko00001,ko01000 - - - peroxidase WXD2_k127_4039307_2 290397.Adeh_0312 2.778e-106 352.0 COG0583@1|root,COG0583@2|Bacteria,1MVA1@1224|Proteobacteria,42VVS@68525|delta/epsilon subdivisions,2X5WR@28221|Deltaproteobacteria,2YVAQ@29|Myxococcales 28221|Deltaproteobacteria K Bacterial regulatory helix-turn-helix protein, lysR family - - - ko:K04761 ko02026,map02026 - - - ko00000,ko00001,ko03000 - - - HTH_1,LysR_substrate WXD2_k127_4039307_4 288000.BBta_6553 1.345e-18 89.0 COG4251@1|root,COG4251@2|Bacteria,1N1KJ@1224|Proteobacteria,2UD2F@28211|Alphaproteobacteria,3JZE6@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria T KaiB - - - ko:K08481 - - - - ko00000 - - - KaiB WXD2_k127_4039307_1 570967.JMLV01000002_gene1584 1.402e-180 582.0 COG0467@1|root,COG0467@2|Bacteria,1NEWW@1224|Proteobacteria,2TRTV@28211|Alphaproteobacteria,2JRRJ@204441|Rhodospirillales 204441|Rhodospirillales T KaiC - - - ko:K08482 - - - - ko00000 - - - ATPase WXD2_k127_4039307_3 1005048.CFU_3678 1.642e-26 121.0 COG3437@1|root,COG3437@2|Bacteria,1PDX2@1224|Proteobacteria,2VMIS@28216|Betaproteobacteria,476BA@75682|Oxalobacteraceae 28216|Betaproteobacteria T Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - ko:K07814 - - - - ko00000,ko02022 - - - Response_reg WXD2_k127_4040695_5 710111.FraQA3DRAFT_5329 8.756e-33 134.0 COG0303@1|root,COG0303@2|Bacteria,2GJC3@201174|Actinobacteria,4ERWC@85013|Frankiales 201174|Actinobacteria H MoeA domain protein domain I and II moeA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006464,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0018315,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0032324,GO:0034641,GO:0036211,GO:0042040,GO:0042278,GO:0043170,GO:0043412,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061598,GO:0061599,GO:0070566,GO:0071704,GO:0071944,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.10.1.1,2.7.7.9 ko:K00963,ko:K03750 ko00040,ko00052,ko00500,ko00520,ko00790,ko01100,ko01130,map00040,map00052,map00500,map00520,map00790,map01100,map01130 M00129,M00361,M00362,M00549 R00289,R09735 RC00002,RC03462 ko00000,ko00001,ko00002,ko01000 - - - MoCF_biosynth,MoeA_C,MoeA_N WXD2_k127_4040695_0 573413.Spirs_3484 1.015e-117 392.0 COG0136@1|root,COG0136@2|Bacteria,2J5ZP@203691|Spirochaetes 203691|Spirochaetes E Belongs to the aspartate-semialdehyde dehydrogenase family asd - 1.2.1.11 ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R02291 RC00684 ko00000,ko00001,ko00002,ko01000 - - - Semialdhyde_dh,Semialdhyde_dhC WXD2_k127_4040695_1 1198114.AciX9_2988 1.831e-109 370.0 COG0527@1|root,COG0527@2|Bacteria,3Y34W@57723|Acidobacteria,2JHV2@204432|Acidobacteriia 204432|Acidobacteriia E Belongs to the aspartokinase family - - 2.7.2.4 ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R00480 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase WXD2_k127_4040695_4 665571.STHERM_c08680 6.083e-45 179.0 COG0289@1|root,COG0289@2|Bacteria,2J647@203691|Spirochaetes 203691|Spirochaetes E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate dapB - 1.17.1.8 ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R04198,R04199 RC00478 ko00000,ko00001,ko00002,ko01000 - - - DapB_C,DapB_N WXD2_k127_4040695_3 234267.Acid_6980 1.893e-81 291.0 COG0329@1|root,COG0329@2|Bacteria,3Y3V8@57723|Acidobacteria 57723|Acidobacteria E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) dapA - 4.3.3.7 ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R10147 RC03062,RC03063 ko00000,ko00001,ko00002,ko01000 - - - DHDPS WXD2_k127_4040695_2 331678.Cphamn1_0020 9.731e-100 332.0 COG2171@1|root,COG2171@2|Bacteria,1FDRM@1090|Chlorobi 1090|Chlorobi E Belongs to the transferase hexapeptide repeat family - - 2.3.1.117 ko:K00674 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 M00016 R04365 RC00004,RC01136 ko00000,ko00001,ko00002,ko01000 - - - Hexapep,Hexapep_2,THDPS_N_2 WXD2_k127_4040695_6 1054217.TALC_00438 5.545e-07 54.0 COG0436@1|root,arCOG01130@2157|Archaea,2XSVT@28890|Euryarchaeota,241M6@183967|Thermoplasmata 183967|Thermoplasmata E Aminotransferase class I and II - - 2.6.1.1 ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 - R00355,R00694,R00734,R00896,R02433,R02619,R05052 RC00006 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 WXD2_k127_4042117_3 240015.ACP_3357 7.029e-50 179.0 COG0005@1|root,COG0005@2|Bacteria,3Y2MA@57723|Acidobacteria,2JI5Q@204432|Acidobacteriia 204432|Acidobacteriia F Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates mtnP - 2.4.2.28 ko:K00772 ko00270,ko01100,map00270,map01100 M00034 R01402 RC00063,RC02819 ko00000,ko00001,ko00002,ko01000 - - - PNP_UDP_1 WXD2_k127_4042117_2 671143.DAMO_1647 1.187e-71 258.0 COG0673@1|root,COG0673@2|Bacteria,2NNUQ@2323|unclassified Bacteria 2|Bacteria S Oxidoreductase family, NAD-binding Rossmann fold gnnA - - ko:K09949 - - - - ko00000 - - iAF987.Gmet_2352 GFO_IDH_MocA WXD2_k127_4042117_0 1121920.AUAU01000004_gene798 5.699e-82 280.0 COG1043@1|root,COG1043@2|Bacteria,3Y33C@57723|Acidobacteria 57723|Acidobacteria M Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell - - - - - - - - - - - - Acetyltransf_11,Hexapep WXD2_k127_4042117_4 1379698.RBG1_1C00001G1649 7.511e-49 181.0 COG0764@1|root,COG0774@1|root,COG0764@2|Bacteria,COG0774@2|Bacteria,2NNYX@2323|unclassified Bacteria 2|Bacteria M Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis fabZ GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0019171 3.5.1.108,4.2.1.59 ko:K02372,ko:K02535,ko:K13599,ko:K16363 ko00061,ko00540,ko00780,ko01100,ko01212,ko02020,map00061,map00540,map00780,map01100,map01212,map02020 M00060,M00083,M00498,M00572 R04428,R04535,R04537,R04544,R04568,R04587,R04954,R04965,R07764,R10117,R10121 RC00166,RC00300,RC00831,RC01095 ko00000,ko00001,ko00002,ko01000,ko01004,ko01005,ko02022 - - - FabA,LpxC WXD2_k127_4042117_1 443143.GM18_0735 1.287e-80 280.0 COG1044@1|root,COG1044@2|Bacteria,1MUX6@1224|Proteobacteria,42M4X@68525|delta/epsilon subdivisions,2WJJY@28221|Deltaproteobacteria,43TUE@69541|Desulfuromonadales 28221|Deltaproteobacteria M Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell lpxD GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 ko:K02536 ko00540,ko01100,map00540,map01100 M00060 R04550 RC00039,RC00166 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Hexapep,Hexapep_2,LpxD WXD2_k127_4047077_2 1340493.JNIF01000003_gene1390 7.093e-87 297.0 COG2010@1|root,COG2010@2|Bacteria,3Y5ZT@57723|Acidobacteria 57723|Acidobacteria C Cytochrome c - - - - - - - - - - - - Cytochrom_C WXD2_k127_4047077_0 1185876.BN8_06543 1.254e-122 400.0 COG1131@1|root,COG1131@2|Bacteria,4NFWM@976|Bacteroidetes,47KHD@768503|Cytophagia 976|Bacteroidetes V ABC-type multidrug transport system ATPase component - - - - - - - - - - - - ABC_tran WXD2_k127_4047077_3 861299.J421_2736 4.062e-24 113.0 COG0308@1|root,COG0308@2|Bacteria,1ZSMW@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Peptidase family M1 domain - - - - - - - - - - - - Peptidase_M1 WXD2_k127_4047077_1 1279017.AQYJ01000027_gene1855 2.066e-120 404.0 COG0308@1|root,COG0308@2|Bacteria,1PTWJ@1224|Proteobacteria,1RZH5@1236|Gammaproteobacteria,465WC@72275|Alteromonadaceae 1236|Gammaproteobacteria E Peptidase family M1 domain - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_2,ABC2_membrane_4,Peptidase_M1 WXD2_k127_4057412_0 338963.Pcar_2000 1.508e-138 450.0 COG0012@1|root,COG0012@2|Bacteria,1MVM4@1224|Proteobacteria,42MNJ@68525|delta/epsilon subdivisions,2WIZZ@28221|Deltaproteobacteria,43S11@69541|Desulfuromonadales 28221|Deltaproteobacteria J Protein of unknown function (DUF933) ychF - - ko:K06942 - - - - ko00000,ko03009 - - - MMR_HSR1,YchF-GTPase_C WXD2_k127_4057412_1 997346.HMPREF9374_3130 2.669e-42 165.0 COG1073@1|root,COG1073@2|Bacteria,1V1RV@1239|Firmicutes,4HGDR@91061|Bacilli,27B3I@186824|Thermoactinomycetaceae 91061|Bacilli S alpha/beta hydrolase fold M1-904 - - - - - - - - - - - Abhydrolase_1,Hydrolase_4 WXD2_k127_4061721_1 1047013.AQSP01000123_gene1531 6.225e-69 258.0 COG0457@1|root,COG3119@1|root,COG0457@2|Bacteria,COG3119@2|Bacteria 2|Bacteria P arylsulfatase activity - - - - - - - - - - - - Sulfatase,TPR_1,TPR_11,TPR_16,TPR_19,TPR_2,TPR_8 WXD2_k127_4061721_0 1117647.M5M_07615 5.784e-155 511.0 COG1629@1|root,COG1629@2|Bacteria,1MVSG@1224|Proteobacteria,1RS33@1236|Gammaproteobacteria 1236|Gammaproteobacteria P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg WXD2_k127_4064559_4 1382359.JIAL01000001_gene1456 7.052e-08 65.0 COG3166@1|root,COG3166@2|Bacteria,3Y4GJ@57723|Acidobacteria,2JJ3Y@204432|Acidobacteriia 204432|Acidobacteriia NU PFAM Fimbrial assembly family protein - - - ko:K02663 - - - - ko00000,ko02035,ko02044 - - - PilN WXD2_k127_4064559_3 278963.ATWD01000001_gene4230 9.527e-14 81.0 COG4972@1|root,COG4972@2|Bacteria,3Y4X3@57723|Acidobacteria,2JKII@204432|Acidobacteriia 204432|Acidobacteriia NU Pilus assembly protein - - - ko:K02662 - - - - ko00000,ko02035,ko02044 - - - - WXD2_k127_4064559_1 401053.AciPR4_3039 3.732e-224 706.0 COG2804@1|root,COG2804@2|Bacteria,3Y3GB@57723|Acidobacteria,2JHVF@204432|Acidobacteriia 204432|Acidobacteriia NU PFAM Type II secretion system protein E - - - ko:K02652 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - T2SSE,T2SSE_N WXD2_k127_4064559_2 204669.Acid345_1575 2.647e-88 308.0 COG1459@1|root,COG1459@2|Bacteria,3Y2X8@57723|Acidobacteria,2JHIX@204432|Acidobacteriia 204432|Acidobacteriia NU PFAM Type II secretion system F domain - - - ko:K02653 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - T2SSF WXD2_k127_4064559_0 1278073.MYSTI_03819 9.875e-261 839.0 COG0421@1|root,COG0421@2|Bacteria 2|Bacteria E spermidine synthase activity speE GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 ko:K00797 ko00270,ko00330,ko00410,ko00480,ko01100,map00270,map00330,map00410,map00480,map01100 M00034,M00133 R01920,R02869,R08359 RC00021,RC00053 ko00000,ko00001,ko00002,ko01000 - - - Spermine_synt_N,Spermine_synth WXD2_k127_406860_1 1144275.COCOR_01135 1.381e-155 511.0 COG1231@1|root,COG1231@2|Bacteria,1QWEG@1224|Proteobacteria,43DB9@68525|delta/epsilon subdivisions,2X8H8@28221|Deltaproteobacteria,2Z3MN@29|Myxococcales 28221|Deltaproteobacteria E FAD dependent oxidoreductase - - - - - - - - - - - - Amino_oxidase WXD2_k127_406860_0 903818.KI912268_gene728 2.83e-191 611.0 COG4262@1|root,COG4262@2|Bacteria,3Y3M2@57723|Acidobacteria 57723|Acidobacteria S Spermine/spermidine synthase domain - - 2.5.1.16 ko:K00797 ko00270,ko00330,ko00410,ko00480,ko01100,map00270,map00330,map00410,map00480,map01100 M00034,M00133 R01920,R02869,R08359 RC00021,RC00053 ko00000,ko00001,ko00002,ko01000 - - - Spermine_synth WXD2_k127_406860_6 1192034.CAP_1496 5.355e-10 72.0 2DI1Z@1|root,301RV@2|Bacteria,1NM7Q@1224|Proteobacteria,433HJ@68525|delta/epsilon subdivisions,2WXZG@28221|Deltaproteobacteria,2Z1QD@29|Myxococcales 28221|Deltaproteobacteria S Domain of Unknown Function (DUF350) - - - - - - - - - - - - DUF350 WXD2_k127_406860_2 1121920.AUAU01000009_gene1851 1.551e-147 489.0 COG1656@1|root,COG1656@2|Bacteria,3Y4NR@57723|Acidobacteria 57723|Acidobacteria S Domain of unknown function (DUF4178) - - - - - - - - - - - - DUF4178 WXD2_k127_406860_4 379066.GAU_3062 1.109e-34 137.0 COG1586@1|root,COG1586@2|Bacteria,1ZV1U@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine - - 4.1.1.50 ko:K01611 ko00270,ko00330,ko01100,map00270,map00330,map01100 M00034,M00133 R00178 RC00299 ko00000,ko00001,ko00002,ko01000 - - - AdoMet_dc WXD2_k127_406860_3 1379270.AUXF01000002_gene1363 8.202e-145 488.0 COG1629@1|root,COG4771@2|Bacteria 2|Bacteria P TonB-dependent receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - CarbopepD_reg_2,Plug,TonB_dep_Rec WXD2_k127_406860_5 179408.Osc7112_3205 3.927e-21 109.0 COG2931@1|root,COG2931@2|Bacteria,1G0DX@1117|Cyanobacteria 1117|Cyanobacteria Q COG2931 RTX toxins and related Ca2 -binding - - - - - - - - - - - - Cadherin_3,DUF4347,HemolysinCabind,Laminin_G_3,VCBS WXD2_k127_4069386_0 378806.STAUR_3171 9.748e-250 789.0 COG3591@1|root,COG3591@2|Bacteria,1MX71@1224|Proteobacteria,437F6@68525|delta/epsilon subdivisions,2X2MS@28221|Deltaproteobacteria,2YTV3@29|Myxococcales 28221|Deltaproteobacteria E Peptidase S46 - - - - - - - - - - - - Peptidase_S46 WXD2_k127_4069386_4 261292.Nit79A3_2553 4.408e-21 104.0 2AZY1@1|root,31S7T@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_4069386_1 378806.STAUR_3445 1.075e-107 366.0 COG0531@1|root,COG0531@2|Bacteria,1NRYF@1224|Proteobacteria,43DN8@68525|delta/epsilon subdivisions,2X6GY@28221|Deltaproteobacteria,2Z3B2@29|Myxococcales 28221|Deltaproteobacteria E Amino acid permease - - - - - - - - - - - - AA_permease_2 WXD2_k127_4069386_2 1267533.KB906734_gene3730 2.083e-78 267.0 2AYX9@1|root,31R2Z@2|Bacteria,3Y4ZH@57723|Acidobacteria,2JJGK@204432|Acidobacteriia 204432|Acidobacteriia S DinB superfamily - - - - - - - - - - - - DinB_2 WXD2_k127_4070466_1 1408254.T458_19155 6.938e-36 142.0 COG3339@1|root,COG3339@2|Bacteria,1V6NW@1239|Firmicutes,4HJQR@91061|Bacilli 91061|Bacilli S Protein of unknown function (DUF1232) - - - - - - - - - - - - DUF1232 WXD2_k127_4070466_0 243231.GSU1276 0.0 1180.0 COG0458@1|root,COG0458@2|Bacteria,1MUDZ@1224|Proteobacteria,42MGK@68525|delta/epsilon subdivisions,2WJQH@28221|Deltaproteobacteria 28221|Deltaproteobacteria F Belongs to the CarB family carB - 6.3.5.5 ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - - CPSase_L_D2,CPSase_L_D3,MGS WXD2_k127_4084825_0 1499967.BAYZ01000167_gene6718 4.194e-259 812.0 COG0556@1|root,COG0556@2|Bacteria,2NNPM@2323|unclassified Bacteria 2|Bacteria L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage uvrB GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009314,GO:0009380,GO:0009628,GO:0032991,GO:0042802,GO:0044424,GO:0044464,GO:0050896,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - ko:K03702,ko:K08999 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - Helicase_C,ResIII,UVR,UvrB WXD2_k127_4084825_1 1242864.D187_002075 1.175e-154 499.0 COG0436@1|root,COG0436@2|Bacteria,1MW0Z@1224|Proteobacteria,42MKR@68525|delta/epsilon subdivisions,2WIS3@28221|Deltaproteobacteria 28221|Deltaproteobacteria E PFAM Aminotransferase class I and II - - 2.6.1.1 ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 - R00355,R00694,R00734,R00896,R02433,R02619,R05052 RC00006 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 WXD2_k127_4084825_3 118173.KB235914_gene3902 2.51e-75 261.0 COG1215@1|root,COG1215@2|Bacteria,1G5YB@1117|Cyanobacteria,1HB60@1150|Oscillatoriales 1117|Cyanobacteria M PFAM Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 WXD2_k127_4084825_4 290317.Cpha266_2535 1.852e-38 151.0 COG0400@1|root,COG0400@2|Bacteria,1FF1R@1090|Chlorobi 1090|Chlorobi S PFAM phospholipase Carboxylesterase - - - - - - - - - - - - Abhydrolase_2 WXD2_k127_4084825_2 1382359.JIAL01000001_gene2381 4.978e-98 336.0 COG0322@1|root,COG0322@2|Bacteria,3Y2Y7@57723|Acidobacteria,2JI6E@204432|Acidobacteriia 204432|Acidobacteriia L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision uvrC - - ko:K03703 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - GIY-YIG,HHH_5,UVR,UvrC_HhH_N WXD2_k127_4087233_1 1499967.BAYZ01000036_gene2419 1.102e-152 492.0 COG2152@1|root,COG2152@2|Bacteria,2NPB8@2323|unclassified Bacteria 2|Bacteria G beta-1,4-mannooligosaccharide phosphorylase - - - - - - - - - - - - Glyco_hydro_130 WXD2_k127_4087233_0 518766.Rmar_1363 9.076e-276 869.0 COG0438@1|root,COG0438@2|Bacteria,4NEW7@976|Bacteroidetes 976|Bacteroidetes M PFAM Glycosyl transferase, group 1 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 WXD2_k127_4091345_4 595460.RRSWK_02637 5.958e-19 95.0 COG0577@1|root,COG0577@2|Bacteria,2IWXH@203682|Planctomycetes 203682|Planctomycetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD WXD2_k127_4091345_1 204669.Acid345_4024 4.562e-70 243.0 COG1309@1|root,COG1309@2|Bacteria,3Y5TS@57723|Acidobacteria,2JK51@204432|Acidobacteriia 204432|Acidobacteriia K WHG domain - - - - - - - - - - - - TetR_N,WHG WXD2_k127_4091345_0 1267535.KB906767_gene3342 2.059e-160 523.0 COG2234@1|root,COG2234@2|Bacteria,3Y3S9@57723|Acidobacteria,2JIF0@204432|Acidobacteriia 204432|Acidobacteriia S PA domain - - - - - - - - - - - - PA,Peptidase_M28 WXD2_k127_4091345_2 1280390.CBQR020000073_gene1569 1.026e-49 191.0 COG1055@1|root,COG1055@2|Bacteria,1TQCH@1239|Firmicutes,4HEW7@91061|Bacilli 91061|Bacilli P Citrate transporter ysdE - - - - - - - - - - - CitMHS WXD2_k127_4091345_3 485913.Krac_8141 6.306e-45 175.0 COG2971@1|root,COG2971@2|Bacteria,2G6Y6@200795|Chloroflexi 200795|Chloroflexi G BadF/BadG/BcrA/BcrD ATPase family - - - - - - - - - - - - BcrAD_BadFG WXD2_k127_4091723_0 1429916.X566_21020 2.71e-82 280.0 COG0652@1|root,COG0652@2|Bacteria 2|Bacteria O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides ppiA - 5.2.1.8 ko:K03767,ko:K03768 ko01503,ko04217,map01503,map04217 - - - ko00000,ko00001,ko01000,ko03110,ko04147 - - - Pro_isomerase WXD2_k127_4091723_1 1184267.A11Q_1101 1.204e-59 227.0 COG0688@1|root,COG0688@2|Bacteria,1MVT4@1224|Proteobacteria,42PAW@68525|delta/epsilon subdivisions,2MT84@213481|Bdellovibrionales,2WRY5@28221|Deltaproteobacteria 213481|Bdellovibrionales I Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) psd - 4.1.1.65 ko:K01613 ko00564,ko01100,ko01110,map00564,map01100,map01110 M00093 R02055 RC00299 ko00000,ko00001,ko00002,ko01000 - - - PS_Dcarbxylase WXD2_k127_4091723_4 1220589.CD32_13630 6.776e-21 95.0 COG4675@1|root,COG4675@2|Bacteria,1V943@1239|Firmicutes,4HJCC@91061|Bacilli,3IY6E@400634|Lysinibacillus 91061|Bacilli S Phage Tail Collar Domain - - - - - - - - - - - - Collar WXD2_k127_4091723_2 1122918.KB907252_gene2847 1.273e-23 103.0 COG4675@1|root,COG4675@2|Bacteria,1VHKQ@1239|Firmicutes,4HVG0@91061|Bacilli,26XMT@186822|Paenibacillaceae 91061|Bacilli S Phage Tail Collar Domain mdpB - - - - - - - - - - - Collar WXD2_k127_4091723_3 1177181.T9A_01762 8.478e-23 102.0 COG4675@1|root,COG4675@2|Bacteria,1MZY9@1224|Proteobacteria,1S64Y@1236|Gammaproteobacteria,1XK96@135619|Oceanospirillales 135619|Oceanospirillales S Tail Collar - - - - - - - - - - - - Collar WXD2_k127_4097089_4 519989.ECTPHS_09393 2.929e-13 73.0 COG0071@1|root,COG0071@2|Bacteria,1N7C7@1224|Proteobacteria,1S607@1236|Gammaproteobacteria,1WYTK@135613|Chromatiales 135613|Chromatiales O Belongs to the small heat shock protein (HSP20) family - - - ko:K13993 ko04141,map04141 - - - ko00000,ko00001,ko03110 - - - HSP20 WXD2_k127_4097089_1 330214.NIDE3635 3.634e-202 645.0 COG4108@1|root,COG4108@2|Bacteria,3J0WP@40117|Nitrospirae 40117|Nitrospirae J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP prfC - - ko:K02837 - - - - ko00000,ko03012 - - - GTP_EFTU,RF3_C WXD2_k127_4097089_3 926550.CLDAP_27830 3.232e-32 142.0 2DM58@1|root,31S4C@2|Bacteria,2GBK4@200795|Chloroflexi 200795|Chloroflexi - - - - - - - - - - - - - - - WXD2_k127_4097089_2 1303518.CCALI_01058 3.663e-165 530.0 COG1522@1|root,COG1522@2|Bacteria 2|Bacteria K sequence-specific DNA binding nirH - - - - - - - - - - - AsnC_trans_reg,HTH_AsnC-type WXD2_k127_4097089_0 649638.Trad_2519 0.0 1148.0 COG0646@1|root,COG1410@1|root,COG0646@2|Bacteria,COG1410@2|Bacteria,1WIRD@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus E Vitamin B12 dependent methionine synthase activation metH - 2.1.1.13 ko:K00548 ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230 M00017 R00946,R09365 RC00035,RC00113,RC01241 ko00000,ko00001,ko00002,ko01000 - - - B12-binding,B12-binding_2,Met_synt_B12,Pterin_bind,S-methyl_trans WXD2_k127_4099225_1 234267.Acid_5651 7.321e-168 537.0 COG4881@1|root,COG4881@2|Bacteria 2|Bacteria - - cbcU - - - - - - - - - - - NrfD WXD2_k127_4099225_2 234267.Acid_5652 6.325e-100 340.0 COG0437@1|root,COG0437@2|Bacteria,3Y81X@57723|Acidobacteria 57723|Acidobacteria C 4Fe-4S binding domain - - - - - - - - - - - - Fer4_11 WXD2_k127_4099225_6 234267.Acid_5653 8.275e-35 138.0 2EE9W@1|root,3384B@2|Bacteria 2|Bacteria C Menaquinol oxidoreductase complex Cbc4, cytochrome c subunit cbcS - - - - - - - - - - - Cytochrom_c3_2,Cytochrome_C554,Paired_CXXCH_1 WXD2_k127_4099225_3 404589.Anae109_3084 4.415e-61 234.0 2C6TZ@1|root,32RHS@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_4099225_4 1122939.ATUD01000006_gene1641 1.21e-52 199.0 COG0745@1|root,COG0745@2|Bacteria,2GJE6@201174|Actinobacteria,4CPX6@84995|Rubrobacteria 84995|Rubrobacteria K COG COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms Transcription - - - - - - - - - - - - Response_reg,Trans_reg_C WXD2_k127_4099225_5 1382359.JIAL01000001_gene497 7.47e-44 178.0 COG0642@1|root,COG2205@2|Bacteria,3Y2W3@57723|Acidobacteria,2JIDP@204432|Acidobacteriia 204432|Acidobacteriia T Histidine kinase - - 2.7.13.3 ko:K07646 ko02020,map02020 M00454 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - DUF4118,HATPase_c,HisKA WXD2_k127_4099225_0 243231.GSU2350 4.418e-224 711.0 COG3158@1|root,COG3158@2|Bacteria,1MUVH@1224|Proteobacteria,42P5Y@68525|delta/epsilon subdivisions,2WJEH@28221|Deltaproteobacteria 28221|Deltaproteobacteria P Transport of potassium into the cell kup GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - ko:K03549 - - - - ko00000,ko02000 2.A.72 - - K_trans WXD2_k127_409945_1 398578.Daci_5074 6.174e-84 295.0 COG0642@1|root,COG0642@2|Bacteria 2|Bacteria T Histidine kinase - - - ko:K02030 - M00236 - - ko00000,ko00002,ko02000 3.A.1.3 - - HATPase_c,HisKA,Hpt,PAS_3,PAS_4,PAS_9,Response_reg,dCache_1 WXD2_k127_409945_0 1396141.BATP01000005_gene5993 1.804e-162 522.0 COG4941@1|root,COG4941@2|Bacteria,46TPI@74201|Verrucomicrobia,2IV2U@203494|Verrucomicrobiae 203494|Verrucomicrobiae K Sigma-70 region 2 - - - - - - - - - - - - Sigma70_r2,Sigma70_r4_2 WXD2_k127_409945_2 497964.CfE428DRAFT_5622 6.403e-58 206.0 COG3795@1|root,COG3795@2|Bacteria,46V6E@74201|Verrucomicrobia 74201|Verrucomicrobia S YCII-related domain - - - - - - - - - - - - YCII WXD2_k127_4112764_0 903818.KI912268_gene1402 4.002e-157 504.0 COG2805@1|root,COG2805@2|Bacteria,3Y316@57723|Acidobacteria 57723|Acidobacteria NU Type II/IV secretion system protein - - - ko:K02669 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - T2SSE WXD2_k127_4112764_2 319225.Plut_0317 1.018e-29 126.0 COG0400@1|root,COG0400@2|Bacteria,1FE1K@1090|Chlorobi 1090|Chlorobi S PFAM phospholipase Carboxylesterase - - - ko:K06999 - - - - ko00000 - - - Abhydrolase_2 WXD2_k127_4112764_1 765910.MARPU_00175 3.021e-44 179.0 COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,1RM8A@1236|Gammaproteobacteria,1WZWS@135613|Chromatiales 135613|Chromatiales T Putative diguanylate phosphodiesterase - - - - - - - - - - - - EAL,GGDEF,PAS_3,PAS_4,PAS_9 WXD2_k127_4117219_1 1131462.DCF50_p2673 4.217e-05 53.0 COG2247@1|root,COG4733@1|root,COG2247@2|Bacteria,COG4733@2|Bacteria,1UZS5@1239|Firmicutes,24FE6@186801|Clostridia,2600Z@186807|Peptococcaceae 186801|Clostridia M cell wall binding repeat 2 - - - - - - - - - - - - CW_binding_2,Endopep_inhib,fn3 WXD2_k127_4117219_0 546273.VEIDISOL_01525 4.59e-75 268.0 COG0042@1|root,COG0042@2|Bacteria,1TQ2R@1239|Firmicutes,4H37S@909932|Negativicutes 909932|Negativicutes H Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines dus - - - - - - - - - - - Dus WXD2_k127_4118367_0 1267535.KB906767_gene1283 1.095e-82 291.0 COG1187@1|root,COG1187@2|Bacteria,3Y6Y9@57723|Acidobacteria,2JP1I@204432|Acidobacteriia 204432|Acidobacteriia J RNA pseudouridylate synthase - - 5.4.99.22 ko:K06178 - - - - ko00000,ko01000,ko03009 - - - PseudoU_synth_2,S4 WXD2_k127_4123782_3 479434.Sthe_1779 1.885e-12 80.0 COG1807@1|root,COG1807@2|Bacteria,2GBE9@200795|Chloroflexi,27Z44@189775|Thermomicrobia 189775|Thermomicrobia M Protein of unknown function (DUF2723) - - - - - - - - - - - - DUF2723 WXD2_k127_4123782_2 1242864.D187_007279 1.355e-12 81.0 COG1807@1|root,COG1807@2|Bacteria,1REWS@1224|Proteobacteria,435AS@68525|delta/epsilon subdivisions,2WZMW@28221|Deltaproteobacteria,2Z2E9@29|Myxococcales 28221|Deltaproteobacteria M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - - - - - - - - - - - WXD2_k127_4123782_4 479434.Sthe_1779 6.297e-11 76.0 COG1807@1|root,COG1807@2|Bacteria,2GBE9@200795|Chloroflexi,27Z44@189775|Thermomicrobia 189775|Thermomicrobia M Protein of unknown function (DUF2723) - - - - - - - - - - - - DUF2723 WXD2_k127_4123782_0 497964.CfE428DRAFT_3217 1.11e-71 256.0 COG3569@1|root,COG3569@2|Bacteria,46S54@74201|Verrucomicrobia 74201|Verrucomicrobia L Eukaryotic DNA topoisomerase I, catalytic core - - 5.99.1.2 ko:K03168 - - - - ko00000,ko01000,ko03032,ko03400 - - - Topoisom_I WXD2_k127_4123782_1 1379698.RBG1_1C00001G1445 1.534e-21 104.0 COG0823@1|root,COG4775@1|root,COG0823@2|Bacteria,COG4775@2|Bacteria,2NQSG@2323|unclassified Bacteria 2|Bacteria MU WD40-like Beta Propeller Repeat - - - ko:K03641,ko:K07277 - - - - ko00000,ko02000,ko03029 1.B.33,2.C.1.2 - - BSP,Bac_surface_Ag,PD40,Peptidase_MA_2 WXD2_k127_4123782_5 1121898.Q766_08720 1.149e-06 50.0 COG0451@1|root,COG0451@2|Bacteria,4NEZX@976|Bacteroidetes,1HWT7@117743|Flavobacteriia,2NSCX@237|Flavobacterium 976|Bacteroidetes GM dehydratase - - 4.1.1.35 ko:K08678 ko00520,ko01100,map00520,map01100 M00361 R01384 RC00508 ko00000,ko00001,ko00002,ko01000 - - - GDP_Man_Dehyd WXD2_k127_4141375_0 290397.Adeh_3665 3.799e-224 707.0 COG1048@1|root,COG1048@2|Bacteria,1MU9T@1224|Proteobacteria,42M33@68525|delta/epsilon subdivisions,2WJGS@28221|Deltaproteobacteria,2YU96@29|Myxococcales 28221|Deltaproteobacteria C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate acnA - 4.2.1.3 ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00173,M00740 R01324,R01325,R01900 RC00497,RC00498,RC00618 br01601,ko00000,ko00001,ko00002,ko01000 - - - Aconitase,Aconitase_C WXD2_k127_4141375_3 68570.DC74_869 8.511e-06 56.0 COG2197@1|root,COG2197@2|Bacteria,2HDJZ@201174|Actinobacteria 201174|Actinobacteria T helix_turn_helix, Lux Regulon - - - - - - - - - - - - GerE,Response_reg WXD2_k127_4141375_1 1123360.thalar_00122 7.809e-62 231.0 COG2937@1|root,COG2937@2|Bacteria,1MWZ6@1224|Proteobacteria,2TSDK@28211|Alphaproteobacteria 28211|Alphaproteobacteria I Belongs to the GPAT DAPAT family plsB - 2.3.1.15 ko:K00631 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R00851,R09380 RC00004,RC00039,RC00041 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Acyltransferase WXD2_k127_4141375_2 404589.Anae109_2915 3.126e-61 217.0 COG2010@1|root,COG2010@2|Bacteria,1RBTK@1224|Proteobacteria,43AHK@68525|delta/epsilon subdivisions,2X5XT@28221|Deltaproteobacteria,2YVZ8@29|Myxococcales 28221|Deltaproteobacteria C Cytochrome c - - - - - - - - - - - - - WXD2_k127_4142701_8 216591.BCAM0442 1.411e-05 55.0 COG0642@1|root,COG2205@2|Bacteria,1MW8M@1224|Proteobacteria,2WGGV@28216|Betaproteobacteria,1K1EJ@119060|Burkholderiaceae 28216|Betaproteobacteria T Member of a two-component regulatory system czcS - 2.7.13.3 ko:K07644 ko02020,map02020 M00452,M00745 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022 - - - HAMP,HATPase_c,HisKA WXD2_k127_4142701_2 76114.ebA6902 1.125e-135 446.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,2VHSB@28216|Betaproteobacteria,2KU97@206389|Rhodocyclales 206389|Rhodocyclales T COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - - - - - - - - - - HTH_8,Response_reg,Sigma54_activat WXD2_k127_4142701_5 105422.BBPM01000064_gene542 1.862e-21 107.0 2EEXH@1|root,338QV@2|Bacteria,2ICQN@201174|Actinobacteria,2NM2T@228398|Streptacidiphilus 201174|Actinobacteria S Glycosyltransferase family 87 - - - - - - - - - - - - GT87,PMT_2 WXD2_k127_4142701_0 1499967.BAYZ01000097_gene4380 7.998e-260 824.0 COG0550@1|root,COG0550@2|Bacteria,2NNS8@2323|unclassified Bacteria 2|Bacteria L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone topA - 5.99.1.2 ko:K03168 - - - - ko00000,ko01000,ko03032,ko03400 - - - Topoisom_bac,Toprim,zf-C4_Topoisom WXD2_k127_4142701_7 156578.ATW7_04147 1.86e-06 57.0 2DUUV@1|root,32UXV@2|Bacteria,1N5A6@1224|Proteobacteria,1S9JI@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_4142701_3 383372.Rcas_2039 4.898e-98 334.0 COG2021@1|root,COG2021@2|Bacteria,2G5JD@200795|Chloroflexi,374TP@32061|Chloroflexia 32061|Chloroflexia E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine metXA GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 ko:K00641 ko00270,ko01100,ko01130,map00270,map01100,map01130 - R01776 RC00004,RC00041 ko00000,ko00001,ko01000 - - - Abhydrolase_1 WXD2_k127_4142701_6 335284.Pcryo_2057 8.906e-20 91.0 COG1983@1|root,COG1983@2|Bacteria,1NAUA@1224|Proteobacteria,1SD7E@1236|Gammaproteobacteria,3NPCM@468|Moraxellaceae 1236|Gammaproteobacteria KT PspC domain - - - - - - - - - - - - PspC WXD2_k127_4142701_1 1128421.JAGA01000002_gene991 7.011e-139 464.0 COG1793@1|root,COG1793@2|Bacteria,2NPKI@2323|unclassified Bacteria 2|Bacteria L ATP dependent DNA ligase C terminal region lig GO:0000287,GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016874,GO:0016886,GO:0022616,GO:0030312,GO:0033554,GO:0034641,GO:0034645,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0140097,GO:1901360,GO:1901576 6.5.1.1,6.5.1.6,6.5.1.7 ko:K10747 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 - R00381,R00382,R10822,R10823 RC00005 ko00000,ko00001,ko01000,ko03032,ko03400 - - - DNA_ligase_A_C,DNA_ligase_A_M,DNA_ligase_A_N WXD2_k127_4142701_4 1267535.KB906767_gene4112 1.661e-36 143.0 COG0039@1|root,COG0039@2|Bacteria,3Y2PG@57723|Acidobacteria,2JII1@204432|Acidobacteriia 204432|Acidobacteriia C Catalyzes the reversible oxidation of malate to oxaloacetate mdh - 1.1.1.37 ko:K00024 ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00012,M00168,M00173,M00346,M00374,M00620,M00740 R00342,R07136 RC00031 ko00000,ko00001,ko00002,ko01000 - - - Ldh_1_C,Ldh_1_N WXD2_k127_4164202_1 1487953.JMKF01000035_gene1169 5.792e-45 172.0 COG4976@1|root,COG4976@2|Bacteria,1G290@1117|Cyanobacteria,1H9JI@1150|Oscillatoriales 1117|Cyanobacteria S Methyltransferase domain - - - - - - - - - - - - Methyltransf_25 WXD2_k127_4164202_0 1121468.AUBR01000001_gene479 1.309e-92 323.0 COG1032@1|root,COG1032@2|Bacteria,1TPGT@1239|Firmicutes,247JS@186801|Clostridia,42FJE@68295|Thermoanaerobacterales 186801|Clostridia C SMART Elongator protein 3 MiaB NifB - - - - - - - - - - - - B12-binding,DUF4080,Radical_SAM WXD2_k127_4164202_2 997346.HMPREF9374_2757 3.869e-06 56.0 2BYNR@1|root,32R3R@2|Bacteria,1V869@1239|Firmicutes,4IV97@91061|Bacilli,27DBM@186824|Thermoactinomycetaceae 91061|Bacilli S Yip1 domain - - - - - - - - - - - - Yip1 WXD2_k127_420106_0 1198114.AciX9_1564 1.66e-109 367.0 COG0612@1|root,COG0612@2|Bacteria,3Y3M9@57723|Acidobacteria,2JHY4@204432|Acidobacteriia 204432|Acidobacteriia S Belongs to the peptidase M16 family - - - - - - - - - - - - Peptidase_M16,Peptidase_M16_C WXD2_k127_420106_2 1123368.AUIS01000008_gene2230 1.065e-79 281.0 COG1376@1|root,COG3409@1|root,COG1376@2|Bacteria,COG3409@2|Bacteria,1MVI4@1224|Proteobacteria,1S1IH@1236|Gammaproteobacteria 1236|Gammaproteobacteria M ErfK YbiS YcfS YnhG family protein - - - - - - - - - - - - PG_binding_1,YkuD WXD2_k127_420106_1 1267535.KB906767_gene577 4.378e-83 294.0 COG0497@1|root,COG0497@2|Bacteria,3Y2J4@57723|Acidobacteria,2JI9C@204432|Acidobacteriia 204432|Acidobacteriia L May be involved in recombinational repair of damaged DNA - - - ko:K03631 - - - - ko00000,ko03400 - - - SMC_N WXD2_k127_4205065_2 1283299.AUKG01000001_gene2338 2.38e-23 115.0 COG2206@1|root,COG2206@2|Bacteria,2GJS8@201174|Actinobacteria 201174|Actinobacteria T metal-dependent phosphohydrolase, HD sub domain - - - - - - - - - - - - GAF_2,GGDEF,HD,HD_5 WXD2_k127_4205065_7 867903.ThesuDRAFT_00805 4.839e-06 50.0 COG3526@1|root,COG3526@2|Bacteria,1VKFI@1239|Firmicutes,24VMR@186801|Clostridia 186801|Clostridia O selT selW selH selenoprotein - - - ko:K07401 - - - - ko00000 - - - Rdx WXD2_k127_4205065_0 391625.PPSIR1_39020 1.339e-67 239.0 COG0631@1|root,COG0631@2|Bacteria,1MVE7@1224|Proteobacteria,43AG6@68525|delta/epsilon subdivisions,2X63V@28221|Deltaproteobacteria,2Z38Y@29|Myxococcales 28221|Deltaproteobacteria T Serine/threonine phosphatases, family 2C, catalytic domain - - 3.1.3.16 ko:K01090 - - - - ko00000,ko01000 - - - PP2C_2 WXD2_k127_4205065_5 330214.NIDE1727 4.815e-13 78.0 COG0484@1|root,COG0484@2|Bacteria,3J0A7@40117|Nitrospirae 40117|Nitrospirae O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins dnaJ - - ko:K03686 - - - - ko00000,ko03029,ko03110 - - - DnaJ,DnaJ_C,DnaJ_CXXCXGXG WXD2_k127_4205065_1 448385.sce3653 7.143e-29 130.0 2DMMW@1|root,32SIJ@2|Bacteria,1N004@1224|Proteobacteria,42TSJ@68525|delta/epsilon subdivisions,2WQHG@28221|Deltaproteobacteria,2YV84@29|Myxococcales 28221|Deltaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_4205065_3 1121106.JQKB01000026_gene4301 1.891e-21 107.0 COG1426@1|root,COG1426@2|Bacteria,1MYWX@1224|Proteobacteria,2TQM2@28211|Alphaproteobacteria,2JT11@204441|Rhodospirillales 204441|Rhodospirillales D Domain of unknown function (DUF4115) - - - ko:K15539 - - - - ko00000 - - - DUF4115,HTH_25 WXD2_k127_4205065_6 1254432.SCE1572_00345 1.044e-10 72.0 2EI76@1|root,33BYI@2|Bacteria,1RBW7@1224|Proteobacteria,42QZD@68525|delta/epsilon subdivisions,2WN6J@28221|Deltaproteobacteria,2YXMN@29|Myxococcales 28221|Deltaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_4205065_4 1278073.MYSTI_03758 6.066e-17 92.0 COG3227@1|root,COG3227@2|Bacteria,1P416@1224|Proteobacteria,438CS@68525|delta/epsilon subdivisions,2WYMI@28221|Deltaproteobacteria,2YWK8@29|Myxococcales 28221|Deltaproteobacteria E Thermolysin metallopeptidase, alpha-helical domain - - 3.4.24.25 ko:K08604 ko05110,ko05111,map05110,map05111 - - - ko00000,ko00001,ko01000,ko01002 - - - FTP,PPC,Peptidase_M4,Peptidase_M4_C WXD2_k127_4213332_0 945713.IALB_1657 1.66e-105 370.0 COG2067@1|root,COG2067@2|Bacteria 2|Bacteria I long-chain fatty acid transporting porin activity - - - ko:K06076 - - - - ko00000,ko02000 1.B.9 - - Toluene_X WXD2_k127_4213332_1 404589.Anae109_4106 1.346e-76 281.0 COG3301@1|root,COG3301@2|Bacteria,1MXQ9@1224|Proteobacteria,42NE8@68525|delta/epsilon subdivisions,2WSJ7@28221|Deltaproteobacteria 28221|Deltaproteobacteria P PFAM Polysulphide reductase, NrfD - - - - - - - - - - - - NrfD WXD2_k127_4213332_2 404589.Anae109_4107 9.801e-62 226.0 COG2391@1|root,COG2391@2|Bacteria,1RIWE@1224|Proteobacteria,42QRV@68525|delta/epsilon subdivisions,2WMUE@28221|Deltaproteobacteria 28221|Deltaproteobacteria P Sulphur transport - - - ko:K07112 - - - - ko00000 - - - Sulf_transp WXD2_k127_4213332_3 404589.Anae109_4108 1.004e-15 77.0 COG2391@1|root,COG2391@2|Bacteria,1N3PQ@1224|Proteobacteria,42URY@68525|delta/epsilon subdivisions,2WQYF@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Sulphur transport - - - ko:K07112 - - - - ko00000 - - - Sulf_transp WXD2_k127_4227816_1 395961.Cyan7425_1966 1.428e-165 528.0 COG1012@1|root,COG1012@2|Bacteria,1G1BD@1117|Cyanobacteria,3KGCF@43988|Cyanothece 1117|Cyanobacteria C Belongs to the aldehyde dehydrogenase family - - 1.2.1.16,1.2.1.20,1.2.1.3,1.2.1.39,1.2.1.79,1.2.1.8 ko:K00128,ko:K00130,ko:K00135,ko:K00138,ko:K00146 ko00010,ko00053,ko00071,ko00250,ko00260,ko00280,ko00310,ko00330,ko00340,ko00350,ko00360,ko00380,ko00410,ko00561,ko00620,ko00625,ko00643,ko00650,ko00760,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00250,map00260,map00280,map00310,map00330,map00340,map00350,map00360,map00380,map00410,map00561,map00620,map00625,map00643,map00650,map00760,map00903,map00981,map01100,map01110,map01120,map01130 M00027,M00135,M00555 R00264,R00631,R00710,R00711,R00713,R00714,R00904,R01752,R01986,R02401,R02536,R02549,R02565,R02566,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146 RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500 ko00000,ko00001,ko00002,ko01000 - - - Aldedh WXD2_k127_4227816_0 395961.Cyan7425_1965 2.945e-214 687.0 COG0174@1|root,COG0174@2|Bacteria 2|Bacteria E glutamine synthetase glnA2 - 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 - R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 - - - Gln-synt_C WXD2_k127_4227816_5 452637.Oter_1832 3.187e-26 118.0 COG3595@1|root,COG3595@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - DUF4097 WXD2_k127_4227816_3 748247.AZKH_0082 2.125e-95 339.0 COG2234@1|root,COG2234@2|Bacteria,1R56X@1224|Proteobacteria 1224|Proteobacteria S Peptidase family M28 - - - - - - - - - - - - Peptidase_M28 WXD2_k127_4227816_4 1207063.P24_12896 1.015e-40 156.0 COG0203@1|root,COG0203@2|Bacteria,1RCWN@1224|Proteobacteria,2U749@28211|Alphaproteobacteria,2JS6K@204441|Rhodospirillales 204441|Rhodospirillales J structural constituent of ribosome rplQ - - ko:K02879 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L17 WXD2_k127_4227816_2 682795.AciX8_1027 4.039e-131 426.0 COG0202@1|root,COG0202@2|Bacteria,3Y3HK@57723|Acidobacteria,2JHZ6@204432|Acidobacteriia 204432|Acidobacteriia K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates rpoA - 2.7.7.6 ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 - - - RNA_pol_A_CTD,RNA_pol_A_bac,RNA_pol_L WXD2_k127_4238870_0 204669.Acid345_0364 0.0 1010.0 COG3256@1|root,COG3256@2|Bacteria,3Y2GQ@57723|Acidobacteria,2JKWD@204432|Acidobacteriia 204432|Acidobacteriia P Cytochrome C and Quinol oxidase polypeptide I - - 1.7.2.5 ko:K04561 ko00910,ko01120,map00910,map01120 M00529 R00294 RC02794 ko00000,ko00001,ko00002,ko01000 3.D.4.10 - - COX1 WXD2_k127_4238870_2 204669.Acid345_0365 4.615e-57 207.0 COG2846@1|root,COG2846@2|Bacteria,3Y4SU@57723|Acidobacteria,2JMU3@204432|Acidobacteriia 204432|Acidobacteriia D Domain of Unknown function (DUF542) - - - ko:K07322 - - - - ko00000 - - - Hemerythrin,ScdA_N WXD2_k127_4238870_4 330214.NIDE0159 1.635e-25 111.0 COG0599@1|root,COG0599@2|Bacteria 2|Bacteria S peroxiredoxin activity yurZ - 2.3.1.12,4.1.1.44 ko:K00627,ko:K01607 ko00010,ko00020,ko00362,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00010,map00020,map00362,map00620,map01100,map01110,map01120,map01130,map01200,map01220 M00307 R00209,R02569,R03470 RC00004,RC00938,RC02742,RC02857 br01601,ko00000,ko00001,ko00002,ko01000 - - - CMD WXD2_k127_4238870_3 1122239.AULS01000001_gene1827 2.399e-52 199.0 COG0492@1|root,COG0492@2|Bacteria,2I413@201174|Actinobacteria,4FMFS@85023|Microbacteriaceae 201174|Actinobacteria O L-lysine 6-monooxygenase (NADPH-requiring) - - - - - - - - - - - - Pyr_redox_2,Pyr_redox_3 WXD2_k127_4238870_1 530564.Psta_4064 1.471e-71 259.0 COG0535@1|root,COG0535@2|Bacteria,2J0M5@203682|Planctomycetes 203682|Planctomycetes S 4Fe-4S single cluster domain - - - - - - - - - - - - Fer4_12,Radical_SAM WXD2_k127_4239687_1 1223410.KN050846_gene944 4.903e-27 119.0 COG0845@1|root,COG0845@2|Bacteria,4NF23@976|Bacteroidetes,1HZGV@117743|Flavobacteriia 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - HlyD_D23 WXD2_k127_4239687_0 671143.DAMO_1933 0.0 1255.0 COG0841@1|root,COG0841@2|Bacteria,2NNUH@2323|unclassified Bacteria 2|Bacteria V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ACR_tran WXD2_k127_4239687_3 1304872.JAGC01000009_gene1248 1.667e-17 87.0 COG0517@1|root,COG0517@2|Bacteria,1N0EB@1224|Proteobacteria,42W96@68525|delta/epsilon subdivisions,2WP5S@28221|Deltaproteobacteria,2MC10@213115|Desulfovibrionales 28221|Deltaproteobacteria S PFAM CBS domain containing protein - - - ko:K07168 - - - - ko00000 - - - CBS WXD2_k127_4239687_2 1279038.KB907342_gene2625 1.796e-20 100.0 COG2005@1|root,COG2005@2|Bacteria,1P9SX@1224|Proteobacteria,2UC9Q@28211|Alphaproteobacteria,2JTWN@204441|Rhodospirillales 204441|Rhodospirillales H Bacterial regulatory helix-turn-helix protein, lysR family - - - ko:K02019 - - - - ko00000,ko03000 - - - HTH_1,TOBE WXD2_k127_4241540_13 945713.IALB_2992 1.393e-21 101.0 COG0517@1|root,COG0517@2|Bacteria 2|Bacteria S IMP dehydrogenase activity - - - - - - - - - - - - CBS WXD2_k127_4241540_8 309807.SRU_2793 5.55e-45 168.0 COG0720@1|root,COG0720@2|Bacteria,4NNY0@976|Bacteroidetes,1FJAI@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes H 6-pyruvoyl tetrahydropterin synthase - - 4.1.2.50,4.2.3.12 ko:K01737 ko00790,ko01100,map00790,map01100 M00842,M00843 R04286,R09959 RC01117,RC02846,RC02847 ko00000,ko00001,ko00002,ko01000,ko03016 - - - PTPS WXD2_k127_4241540_11 1379698.RBG1_1C00001G0518 8.46e-29 135.0 COG0515@1|root,COG0515@2|Bacteria,2NQNE@2323|unclassified Bacteria 2|Bacteria T Serine threonine protein kinase - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PASTA,Pkinase,TPR_2,TPR_8 WXD2_k127_4241540_16 1449351.RISW2_23295 2.503e-16 92.0 COG4770@1|root,COG4770@2|Bacteria,1P6RE@1224|Proteobacteria,2TRC2@28211|Alphaproteobacteria,4KKNE@93682|Roseivivax 28211|Alphaproteobacteria I 3-methylcrotonyl-CoA carboxylase subunit alpha mccA - 6.4.1.4 ko:K01968 ko00280,ko01100,map00280,map01100 M00036 R04138 RC00367,RC00942 ko00000,ko00001,ko00002,ko01000 - - - Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2 WXD2_k127_4241540_0 204669.Acid345_0153 5.919e-173 557.0 COG0439@1|root,COG0439@2|Bacteria,3Y3FH@57723|Acidobacteria,2JKRD@204432|Acidobacteriia 204432|Acidobacteriia I Biotin carboxylase C-terminal domain - - 6.3.4.14,6.4.1.2 ko:K01961 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04385 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 - - - Biotin_carb_C,Biotin_carb_N,CPSase_L_D2 WXD2_k127_4241540_12 682795.AciX8_2392 2.755e-22 99.0 COG1314@1|root,COG1314@2|Bacteria,3Y56S@57723|Acidobacteria,2JJVA@204432|Acidobacteriia 204432|Acidobacteriia U Preprotein translocase SecG subunit - - - ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 - - SecG WXD2_k127_4241540_4 31234.CRE26365 8.149e-52 192.0 COG0149@1|root,KOG1643@2759|Eukaryota,38ETQ@33154|Opisthokonta,3B9YV@33208|Metazoa,3CW21@33213|Bilateria,40B82@6231|Nematoda,1KU27@119089|Chromadorea,40W9M@6236|Rhabditida 33208|Metazoa G triosephosphate isomerase TPI1 GO:0000768,GO:0003008,GO:0003674,GO:0003824,GO:0004807,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006949,GO:0007275,GO:0007520,GO:0007525,GO:0007568,GO:0008150,GO:0008152,GO:0008340,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009435,GO:0009605,GO:0009612,GO:0009628,GO:0009653,GO:0009987,GO:0010259,GO:0014902,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019674,GO:0019682,GO:0019693,GO:0019725,GO:0019751,GO:0019752,GO:0019899,GO:0030016,GO:0030017,GO:0030018,GO:0030154,GO:0031430,GO:0031625,GO:0031672,GO:0031674,GO:0032501,GO:0032502,GO:0032787,GO:0033500,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042592,GO:0042593,GO:0042692,GO:0042802,GO:0042803,GO:0042866,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043292,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044389,GO:0044422,GO:0044424,GO:0044444,GO:0044449,GO:0044464,GO:0045454,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0046983,GO:0048646,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050794,GO:0050877,GO:0050896,GO:0051146,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061061,GO:0061615,GO:0061620,GO:0061621,GO:0061718,GO:0065007,GO:0065008,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0099080,GO:0099081,GO:0099512,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003 R01015 RC00423 ko00000,ko00001,ko00002,ko01000,ko04147 - - - TIM WXD2_k127_4241540_10 543632.JOJL01000037_gene6390 2.44e-43 173.0 COG2199@1|root,COG3850@1|root,COG3706@2|Bacteria,COG3850@2|Bacteria,2IA4H@201174|Actinobacteria,4D9U5@85008|Micromonosporales 201174|Actinobacteria T Diguanylate cyclase - - - - - - - - - - - - GAF,GAF_2,GGDEF,HAMP WXD2_k127_4241540_2 1255043.TVNIR_1913 1.171e-63 242.0 COG1216@1|root,COG2120@1|root,COG3064@1|root,COG1216@2|Bacteria,COG2120@2|Bacteria,COG3064@2|Bacteria,1MUTM@1224|Proteobacteria,1S2K7@1236|Gammaproteobacteria,1X08V@135613|Chromatiales 135613|Chromatiales M GlcNAc-PI de-N-acetylase - - - - - - - - - - - - Glycos_transf_2,PIG-L WXD2_k127_4241540_9 28042.GU90_00070 9.23e-45 187.0 COG0438@1|root,COG1216@1|root,COG0438@2|Bacteria,COG1216@2|Bacteria,2GK2D@201174|Actinobacteria,4DXK5@85010|Pseudonocardiales 201174|Actinobacteria M glycosyl transferase family 2 - - - ko:K07011 - - - - ko00000 - - - Glyco_tranf_2_3,Glyco_trans_1_4,Glycos_transf_1,Glycos_transf_2 WXD2_k127_4241540_7 316274.Haur_2678 3.69e-45 187.0 COG0438@1|root,COG1216@1|root,COG0438@2|Bacteria,COG1216@2|Bacteria,2G762@200795|Chloroflexi,37649@32061|Chloroflexia 32061|Chloroflexia M Glycosyl transferases group 1 - - - - - - - - - - - - Glyco_trans_1_4 WXD2_k127_4241540_5 1403819.BATR01000137_gene4837 5.696e-49 199.0 COG1560@1|root,COG1560@2|Bacteria,46XF4@74201|Verrucomicrobia,2IVQY@203494|Verrucomicrobiae 203494|Verrucomicrobiae M Bacterial lipid A biosynthesis acyltransferase - - - - - - - - - - - - Lip_A_acyltrans WXD2_k127_4241540_3 1429851.X548_15495 2.983e-63 228.0 COG0726@1|root,COG0726@2|Bacteria,1PJQG@1224|Proteobacteria,1S5G3@1236|Gammaproteobacteria,1XC69@135614|Xanthomonadales 135614|Xanthomonadales G Polysaccharide deacetylase - - - - - - - - - - - - Polysacc_deac_1 WXD2_k127_4241540_6 497964.CfE428DRAFT_0931 1.681e-46 175.0 COG2230@1|root,COG2230@2|Bacteria,46Z8K@74201|Verrucomicrobia 74201|Verrucomicrobia M Methyltransferase domain - - - - - - - - - - - - - WXD2_k127_4241540_14 103690.17134448 8.651e-20 94.0 COG0642@1|root,COG0745@1|root,COG4252@1|root,COG0642@2|Bacteria,COG0745@2|Bacteria,COG4252@2|Bacteria,1G3JA@1117|Cyanobacteria,1HJCM@1161|Nostocales 1117|Cyanobacteria T Integral membrane sensor hybrid histidine kinase - - - - - - - - - - - - CHASE2,HATPase_c,HisKA,Response_reg WXD2_k127_4241540_17 1282876.BAOK01000001_gene1486 1.168e-08 66.0 COG4552@1|root,COG4552@2|Bacteria,1NJ0B@1224|Proteobacteria 1224|Proteobacteria S Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_9 WXD2_k127_4241540_18 640511.BC1002_4795 0.0005371 52.0 COG0500@1|root,COG2226@2|Bacteria,1RFBE@1224|Proteobacteria,2VW9T@28216|Betaproteobacteria,1KHJW@119060|Burkholderiaceae 28216|Betaproteobacteria Q Methyltransferase domain - - - - - - - - - - - - Methyltransf_11,Methyltransf_23 WXD2_k127_4241540_15 1121366.KB892447_gene2127 1.041e-18 100.0 COG1216@1|root,COG1216@2|Bacteria,2GIUN@201174|Actinobacteria,22JNX@1653|Corynebacteriaceae 201174|Actinobacteria S Glycosyltransferases wbbL GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0045226,GO:0046379,GO:0071704,GO:0071944,GO:1901576 2.4.1.289 ko:K16870 - - - - ko00000,ko01000,ko01003 - - iNJ661.Rv3265c Glyco_tranf_2_3,Glycos_transf_2 WXD2_k127_4241540_1 671143.DAMO_0252 4.362e-97 332.0 COG1134@1|root,COG1134@2|Bacteria,2NP4S@2323|unclassified Bacteria 2|Bacteria GM ATPases associated with a variety of cellular activities - - 3.6.3.38 ko:K09689,ko:K09691 ko02010,map02010 M00249,M00250 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.101,3.A.1.103 - - ABC_tran,Wzt_C WXD2_k127_4245936_4 1165841.SULAR_07038 6.767e-23 115.0 COG0705@1|root,COG0705@2|Bacteria,1QRB2@1224|Proteobacteria,42W9F@68525|delta/epsilon subdivisions 1224|Proteobacteria S Rhomboid family - - - - - - - - - - - - Rhomboid WXD2_k127_4245936_2 1089548.KI783301_gene2556 1.864e-47 180.0 COG0300@1|root,COG0300@2|Bacteria,1TSJ3@1239|Firmicutes,4HDU5@91061|Bacilli,3WE8A@539002|Bacillales incertae sedis 91061|Bacilli S Belongs to the short-chain dehydrogenases reductases (SDR) family yqjQ - - ko:K07124 - - - - ko00000 - - - adh_short WXD2_k127_4245936_0 1267535.KB906767_gene248 1.171e-127 415.0 COG0115@1|root,COG0115@2|Bacteria,3Y32X@57723|Acidobacteria,2JI58@204432|Acidobacteriia 204432|Acidobacteriia E Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family ilvE - 2.6.1.42 ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00036,M00119,M00570 R01090,R01214,R02199,R10991 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_4 WXD2_k127_4245936_3 340.xcc-b100_4044 1.241e-46 179.0 COG2003@1|root,COG2003@2|Bacteria,1MXZ5@1224|Proteobacteria,1RP86@1236|Gammaproteobacteria,1X4CG@135614|Xanthomonadales 135614|Xanthomonadales E Belongs to the UPF0758 family radC - - ko:K03630 - - - - ko00000 - - - RadC WXD2_k127_4245936_1 1104324.P186_0659 3.521e-72 250.0 COG0846@1|root,arCOG04248@2157|Archaea,2XQBQ@28889|Crenarchaeota 28889|Crenarchaeota K form. Deacetylates the N-terminal lysine residue of Alba, the major archaeal chromatin protein and that, in turn, increases Alba's DNA binding affinity, thereby repressing transcription cobB - - ko:K12410 - - - - ko00000,ko01000 - - - SIR2 WXD2_k127_4249459_3 318424.EU78_04755 7.985e-32 127.0 COG5483@1|root,COG5483@2|Bacteria,2IHSH@201174|Actinobacteria,239GM@1762|Mycobacteriaceae 201174|Actinobacteria S Protein of unknown function, DUF488 - - - - - - - - - - - - DUF488 WXD2_k127_4249459_1 316274.Haur_2699 2.26e-61 238.0 COG3437@1|root,COG3437@2|Bacteria,2G6QF@200795|Chloroflexi,37587@32061|Chloroflexia 32061|Chloroflexia KT metal-dependent phosphohydrolase, HD sub domain - - - ko:K07814 - - - - ko00000,ko02022 - - - HD_5,Response_reg WXD2_k127_4249459_2 877424.ATWC01000020_gene1290 3.949e-48 197.0 COG3437@1|root,COG3437@2|Bacteria,1UQJH@1239|Firmicutes,248UM@186801|Clostridia,27IRU@186928|unclassified Lachnospiraceae 186801|Clostridia T HD domain - - - - - - - - - - - - GGDEF,HD,HD_5,Response_reg WXD2_k127_4249459_0 234267.Acid_3721 8.371e-137 444.0 COG3191@1|root,COG3191@2|Bacteria,3Y699@57723|Acidobacteria 57723|Acidobacteria M Peptidase family S58 - - 3.4.11.19 ko:K01266 - - - - ko00000,ko01000,ko01002 - - - Peptidase_S58 WXD2_k127_4269981_3 1411123.JQNH01000001_gene500 6.579e-08 54.0 COG0123@1|root,COG0123@2|Bacteria,1MU7P@1224|Proteobacteria,2TSX9@28211|Alphaproteobacteria 28211|Alphaproteobacteria BQ Including yeast histone deacetylase and acetoin utilization protein MA20_07590 - - ko:K04768 - - - - ko00000 - - - Hist_deacetyl WXD2_k127_4269981_0 748449.Halha_2399 4.901e-34 145.0 COG0438@1|root,COG0438@2|Bacteria,1TPY6@1239|Firmicutes,24834@186801|Clostridia 186801|Clostridia M PFAM Glycosyl transferase, group 1 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 WXD2_k127_4269981_2 1123371.ATXH01000007_gene556 4.51e-10 67.0 2EAFJ@1|root,334IY@2|Bacteria,2GHZR@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria S Domain of unknown function (DUF1844) - - - - - - - - - - - - DUF1844 WXD2_k127_4269981_4 665571.STHERM_c06610 9.726e-07 62.0 COG0457@1|root,COG0457@2|Bacteria,2J5PC@203691|Spirochaetes 203691|Spirochaetes S Tetratricopeptide repeat lmp1 - - - - - - - - - - - Mrr_cat,TPR_16,TPR_2,TPR_6,TPR_7,TPR_8 WXD2_k127_4269981_1 378806.STAUR_5589 1.769e-13 77.0 COG0457@1|root,COG0457@2|Bacteria,1R64F@1224|Proteobacteria,42Q6D@68525|delta/epsilon subdivisions,2WKT0@28221|Deltaproteobacteria,2YYVN@29|Myxococcales 28221|Deltaproteobacteria S Domain of unknown function (DUF4388) - - - - - - - - - - - - DUF4388 WXD2_k127_429327_2 215803.DB30_1691 9.058e-22 98.0 COG4945@1|root,COG4945@2|Bacteria,1NQHX@1224|Proteobacteria,439DS@68525|delta/epsilon subdivisions,2X4NP@28221|Deltaproteobacteria,2YZBB@29|Myxococcales 28221|Deltaproteobacteria G C-terminal binding-module, SLH-like, of glucodextranase - - - - - - - - - - - - Glucodextran_C WXD2_k127_429327_1 215803.DB30_1692 4.312e-138 447.0 COG3833@1|root,COG3833@2|Bacteria,1QA3Z@1224|Proteobacteria,42R4X@68525|delta/epsilon subdivisions,2WN1E@28221|Deltaproteobacteria,2YU8W@29|Myxococcales 28221|Deltaproteobacteria P Binding-protein-dependent transport system inner membrane component - - - ko:K10110,ko:K15772 ko02010,map02010 M00194,M00491 - - ko00000,ko00001,ko00002,ko02000 3.A.1.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.22 - - BPD_transp_1 WXD2_k127_429327_0 378806.STAUR_7140 2.85e-170 555.0 COG1175@1|root,COG1175@2|Bacteria,1MXKR@1224|Proteobacteria,42UM4@68525|delta/epsilon subdivisions,2WQPJ@28221|Deltaproteobacteria,2YUAR@29|Myxococcales 28221|Deltaproteobacteria P Sugar ABC transporter permease malF - - ko:K10109,ko:K15770,ko:K15771 ko02010,map02010 M00194,M00491 - - ko00000,ko00001,ko00002,ko02000 3.A.1.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.22 - - BPD_transp_1,SBP_bac_8 WXD2_k127_4293625_0 471223.GWCH70_0033 3.258e-180 586.0 COG0143@1|root,COG0143@2|Bacteria,1TPA1@1239|Firmicutes,4H9VC@91061|Bacilli,1WEZ0@129337|Geobacillus 91061|Bacilli J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation metG GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 ko:K01874 ko00450,ko00970,map00450,map00970 M00359,M00360 R03659,R04773 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,tRNA-synt_1g,tRNA_bind WXD2_k127_4293625_1 1229172.JQFA01000002_gene2621 1.419e-166 560.0 COG0642@1|root,COG0745@1|root,COG0784@1|root,COG4251@1|root,COG0745@2|Bacteria,COG0784@2|Bacteria,COG2205@2|Bacteria,COG4251@2|Bacteria,1G09B@1117|Cyanobacteria,1H7T9@1150|Oscillatoriales 1117|Cyanobacteria T Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - - - - - - - - - - GAF_2,HATPase_c,HisKA,PAS_3,PAS_4,PAS_8,PAS_9,Response_reg WXD2_k127_4293625_4 1248916.ANFY01000005_gene2781 1.993e-75 257.0 COG1898@1|root,COG1898@2|Bacteria,1R9YD@1224|Proteobacteria,2U7G8@28211|Alphaproteobacteria,2K456@204457|Sphingomonadales 204457|Sphingomonadales M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose - - 5.1.3.13 ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R06514 RC01531 ko00000,ko00001,ko00002,ko01000 - - - dTDP_sugar_isom WXD2_k127_4293625_2 1121920.AUAU01000004_gene849 8.056e-123 402.0 COG0861@1|root,COG0861@2|Bacteria,3Y37C@57723|Acidobacteria 57723|Acidobacteria P PFAM Integral membrane protein TerC - - - ko:K05794 - - - - ko00000 - - - TerC WXD2_k127_4293625_3 530564.Psta_1105 1.693e-99 332.0 COG0583@1|root,COG0583@2|Bacteria,2J27E@203682|Planctomycetes 203682|Planctomycetes K LysR substrate binding domain - - - ko:K03717 - - - - ko00000,ko03000 - - - HTH_1,LysR_substrate WXD2_k127_4293625_5 96561.Dole_1102 4.347e-36 154.0 COG0628@1|root,COG0628@2|Bacteria,1MVX7@1224|Proteobacteria,42N2T@68525|delta/epsilon subdivisions,2WMYV@28221|Deltaproteobacteria,2MI58@213118|Desulfobacterales 28221|Deltaproteobacteria S AI-2E family transporter - - - - - - - - - - - - AI-2E_transport WXD2_k127_4293625_10 1454004.AW11_02286 0.0002773 49.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,2VHSB@28216|Betaproteobacteria 28216|Betaproteobacteria T response regulator pilR - - ko:K02667 ko02020,map02020 M00501 - - ko00000,ko00001,ko00002,ko02022,ko02035 - - - HTH_8,Response_reg,Sigma54_activat WXD2_k127_4293625_6 684949.ATTJ01000001_gene1709 2.383e-33 133.0 COG3603@1|root,COG3603@2|Bacteria,1WN1I@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S COGs COG3603 conserved - - - ko:K09707 - - - - ko00000 - - - ACT_7 WXD2_k127_4293625_8 338969.Rfer_2741 1.337e-15 81.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,2VHSB@28216|Betaproteobacteria 28216|Betaproteobacteria T response regulator - - - ko:K02481 - - - - ko00000,ko02022 - - - HTH_8,Response_reg,Sigma54_activat WXD2_k127_4293625_7 1254432.SCE1572_52615 5.41e-25 122.0 COG0515@1|root,COG2203@1|root,COG0515@2|Bacteria,COG2203@2|Bacteria 2|Bacteria T Gaf domain pelD - 2.7.13.3,2.7.7.65,4.6.1.1 ko:K01768,ko:K11527,ko:K18967,ko:K21009 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000,ko01001,ko02000,ko02022 9.B.34.1.1 - - AI-2E_transport,GAF,GAF_2,GAF_3,GGDEF,Guanylate_cyc,HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_9,PelD_GGDEF,Response_reg WXD2_k127_430516_4 1187851.A33M_3198 6.285e-118 395.0 COG1924@1|root,COG1924@2|Bacteria,1R411@1224|Proteobacteria,2U1DN@28211|Alphaproteobacteria 28211|Alphaproteobacteria C Benzoyl-CoA reductase subunit - - 1.3.7.8 ko:K04114 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 M00541 R02451 RC00002,RC01839 ko00000,ko00001,ko00002,ko01000 - - - BcrAD_BadFG WXD2_k127_430516_1 1187851.A33M_3197 1.016e-201 634.0 COG1775@1|root,COG1775@2|Bacteria,1NKED@1224|Proteobacteria,2U31W@28211|Alphaproteobacteria 28211|Alphaproteobacteria E benzoyl-CoA reductase - - 1.3.7.8 ko:K04113 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 M00541 R02451 RC00002,RC01839 ko00000,ko00001,ko00002,ko01000 - - - HGD-D WXD2_k127_430516_3 85643.Tmz1t_2951 2.261e-143 466.0 COG1775@1|root,COG1775@2|Bacteria,1NNW9@1224|Proteobacteria,2VV78@28216|Betaproteobacteria,2KXPH@206389|Rhodocyclales 206389|Rhodocyclales E 2-hydroxyglutaryl-CoA dehydratase, D-component - - 1.3.7.8 ko:K04112 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 M00541 R02451 RC00002,RC01839 ko00000,ko00001,ko00002,ko01000 - - - HGD-D WXD2_k127_430516_7 1244869.H261_10422 1.807e-44 183.0 COG1024@1|root,COG1024@2|Bacteria,1R7WW@1224|Proteobacteria 1224|Proteobacteria I Enoyl-CoA hydratase/isomerase dch - 4.2.1.100 ko:K07537 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 M00541 R05597 RC03168 ko00000,ko00001,ko00002,ko01000 - - - ECH_1 WXD2_k127_430516_2 1187851.A33M_3194 3.039e-145 469.0 COG1024@1|root,COG1024@2|Bacteria,1QY95@1224|Proteobacteria,2U4PY@28211|Alphaproteobacteria 28211|Alphaproteobacteria I Enoyl-CoA hydratase/isomerase - - 3.7.1.21 ko:K07539 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 M00541 R05593,R05594,R10696 RC01430,RC01431,RC03237 ko00000,ko00001,ko00002,ko01000 - - - ECH_1 WXD2_k127_430516_8 1187851.A33M_3193 5.115e-26 109.0 COG1063@1|root,COG1063@2|Bacteria,1QTU5@1224|Proteobacteria,2TW9Q@28211|Alphaproteobacteria 28211|Alphaproteobacteria E Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology yphC - 1.1.1.368 ko:K07538 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 M00541 R05581 RC00850 ko00000,ko00001,ko00002,ko01000 - - - ADH_N,ADH_N_assoc,ADH_zinc_N WXD2_k127_430516_6 1232410.KI421412_gene166 3.555e-80 287.0 COG1064@1|root,COG1064@2|Bacteria,1QVIH@1224|Proteobacteria,42NMX@68525|delta/epsilon subdivisions,2WJGB@28221|Deltaproteobacteria,43TA2@69541|Desulfuromonadales 28221|Deltaproteobacteria C Alanine dehydrogenase/PNT, C-terminal domain bamQ - 1.1.1.368 ko:K07538 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 M00541 R05581 RC00850 ko00000,ko00001,ko00002,ko01000 - - - ADH_N,ADH_zinc_N WXD2_k127_430516_5 1123228.AUIH01000008_gene2400 2.008e-81 291.0 COG0659@1|root,COG0659@2|Bacteria,1MWDF@1224|Proteobacteria,1SYC8@1236|Gammaproteobacteria 1236|Gammaproteobacteria P COG0659 Sulfate permease and related transporters (MFS superfamily) - - - ko:K03321 - - - - ko00000,ko02000 2.A.53.3 - - STAS,STAS_2,Sulfate_transp WXD2_k127_430516_0 525909.Afer_1020 0.0 1461.0 COG0243@1|root,COG0243@2|Bacteria,2GNYQ@201174|Actinobacteria,4CNGZ@84992|Acidimicrobiia 84992|Acidimicrobiia C Molybdopterin oxidoreductase Fe4S4 domain - - - - - - - - - - - - Molybdop_Fe4S4,Molybdopterin,Molydop_binding WXD2_k127_430516_9 1304275.C41B8_18181 5.61e-20 94.0 COG0437@1|root,COG3301@1|root,COG0437@2|Bacteria,COG3301@2|Bacteria,1MU1B@1224|Proteobacteria,1SYJH@1236|Gammaproteobacteria 1236|Gammaproteobacteria C 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - - - - - - - - - - Fer4_11,Fer4_3,Fer4_7 WXD2_k127_4308752_4 136993.KB900626_gene3784 3.643e-45 181.0 COG0120@1|root,COG0120@2|Bacteria,1MVGR@1224|Proteobacteria,2TU68@28211|Alphaproteobacteria,36Y1K@31993|Methylocystaceae 28211|Alphaproteobacteria G Ribose 5-phosphate isomerase A (phosphoriboisomerase A) rpiA - 5.3.1.6 ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167,M00580 R01056 RC00434 ko00000,ko00001,ko00002,ko01000 - - - Rib_5-P_isom_A WXD2_k127_4308752_1 391596.PBAL39_17219 6.956e-94 337.0 COG0405@1|root,COG0405@2|Bacteria,4NF2H@976|Bacteroidetes,1IWCC@117747|Sphingobacteriia 976|Bacteroidetes E Gamma-glutamyltranspeptidase ggt - 2.3.2.2,3.4.19.13 ko:K00681 ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100 - R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935 RC00064,RC00090,RC00096 ko00000,ko00001,ko01000,ko01002 - - - G_glu_transpept WXD2_k127_4308752_2 760568.Desku_3200 1.27e-89 302.0 COG1521@1|root,COG1521@2|Bacteria,1TR0X@1239|Firmicutes,248PX@186801|Clostridia,260RP@186807|Peptococcaceae 186801|Clostridia F Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis coaX - 2.7.1.33 ko:K03525 ko00770,ko01100,map00770,map01100 M00120 R02971,R03018,R04391 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - Pan_kinase WXD2_k127_4308752_5 1122919.KB905557_gene1171 1.776e-26 119.0 COG0340@1|root,COG1654@1|root,COG0340@2|Bacteria,COG1654@2|Bacteria,1TQCU@1239|Firmicutes,4HB60@91061|Bacilli,26QTA@186822|Paenibacillaceae 91061|Bacilli K Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor birA - 6.3.4.15 ko:K03524 ko00780,ko01100,map00780,map01100 - R01074,R05145 RC00043,RC00070,RC00096,RC02896 ko00000,ko00001,ko01000,ko03000 - - - BPL_C,BPL_LplA_LipB,HTH_11 WXD2_k127_4308752_0 1123371.ATXH01000005_gene2143 4.479e-298 938.0 COG0525@1|root,COG0525@2|Bacteria,2GGVS@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner valS - 6.1.1.9 ko:K01873 ko00970,map00970 M00359,M00360 R03665 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,Val_tRNA-synt_C,tRNA-synt_1 WXD2_k127_4308752_3 1121468.AUBR01000047_gene1877 7.476e-76 268.0 COG0533@1|root,COG0533@2|Bacteria,1TQDR@1239|Firmicutes,247MG@186801|Clostridia,42EXJ@68295|Thermoanaerobacterales 186801|Clostridia J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction tsaD - 2.3.1.234 ko:K01409 - - R10648 RC00070,RC00416 ko00000,ko01000,ko03016 - - - Peptidase_M22 WXD2_k127_431175_0 1340493.JNIF01000003_gene2186 3.247e-200 655.0 COG1026@1|root,COG1026@2|Bacteria 2|Bacteria S Peptidase M16C associated - - - ko:K06972 - - - - ko00000,ko01000,ko01002 - - - M16C_assoc,Peptidase_M16,Peptidase_M16_C,SLH WXD2_k127_4317723_0 335543.Sfum_2578 1.091e-96 327.0 COG1418@1|root,COG1418@2|Bacteria,1P7YA@1224|Proteobacteria,42KZ8@68525|delta/epsilon subdivisions,2WJG1@28221|Deltaproteobacteria,2MQ65@213462|Syntrophobacterales 28221|Deltaproteobacteria A Endoribonuclease that initiates mRNA decay rny - - ko:K18682 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - DUF3552,HD,KH_1 WXD2_k127_4317723_4 204669.Acid345_0720 1.973e-15 79.0 COG3027@1|root,COG3027@2|Bacteria,3Y5IJ@57723|Acidobacteria,2JJZS@204432|Acidobacteriia 204432|Acidobacteriia D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division - - - ko:K09888 - - - - ko00000,ko03036 - - - ZapA WXD2_k127_4317723_6 637905.SVI_2433 3.511e-10 69.0 2BFR9@1|root,329JZ@2|Bacteria,1QEX2@1224|Proteobacteria,1TBUD@1236|Gammaproteobacteria,2QD53@267890|Shewanellaceae 1236|Gammaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_4317723_5 258533.BN977_04341 1.734e-11 73.0 COG0607@1|root,COG0640@1|root,COG0607@2|Bacteria,COG0640@2|Bacteria,2I98A@201174|Actinobacteria,23999@1762|Mycobacteriaceae 201174|Actinobacteria K Rhodanese-like domain - - - - - - - - - - - - HTH_20,HTH_5,Rhodanese WXD2_k127_4317723_1 326297.Sama_0488 5.289e-96 322.0 COG3291@1|root,COG3291@2|Bacteria,1NE5Q@1224|Proteobacteria,1TCNR@1236|Gammaproteobacteria,2Q8VQ@267890|Shewanellaceae 1236|Gammaproteobacteria S Pregnancy-associated plasma protein-A - - - - - - - - - - - - Peptidase_M43 WXD2_k127_4317723_3 204669.Acid345_4045 1.557e-15 87.0 COG0468@1|root,COG0468@2|Bacteria,3Y4QB@57723|Acidobacteria,2JJBA@204432|Acidobacteriia 204432|Acidobacteriia L recA bacterial DNA recombination protein - - - - - - - - - - - - RecA WXD2_k127_4317723_2 278963.ATWD01000001_gene1106 2.961e-61 237.0 COG0389@1|root,COG0389@2|Bacteria,3Y3EV@57723|Acidobacteria,2JIUC@204432|Acidobacteriia 204432|Acidobacteriia L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII - - - ko:K14161 - - - - ko00000,ko03400 - - - IMS WXD2_k127_4317723_7 395961.Cyan7425_1899 3.019e-09 70.0 COG0500@1|root,COG2226@2|Bacteria,1G49I@1117|Cyanobacteria 1117|Cyanobacteria Q Methylase involved in ubiquinone menaquinone biosynthesis - - - - - - - - - - - - Methyltransf_11,Methyltransf_23,Methyltransf_31 WXD2_k127_4334078_3 365044.Pnap_1537 2.244e-13 70.0 COG1814@1|root,COG1814@2|Bacteria,1MUZE@1224|Proteobacteria,2VJ27@28216|Betaproteobacteria,4AAAZ@80864|Comamonadaceae 28216|Betaproteobacteria S VIT family - - - - - - - - - - - - VIT1 WXD2_k127_4334078_1 378806.STAUR_6968 8.513e-117 381.0 COG0262@1|root,COG0262@2|Bacteria,1NE59@1224|Proteobacteria 1224|Proteobacteria H RibD C-terminal domain - - - - - - - - - - - - RibD_C WXD2_k127_4334078_0 1040989.AWZU01000125_gene3972 9.465e-238 747.0 COG0654@1|root,COG0654@2|Bacteria,1MUN4@1224|Proteobacteria,2TQT8@28211|Alphaproteobacteria,3JTRW@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria CH FAD binding domain pcpB - 1.14.13.127,1.14.13.50 ko:K03391,ko:K05712 ko00360,ko00361,ko00364,ko01100,ko01120,ko01220,map00360,map00361,map00364,map01100,map01120,map01220 M00545 R03982,R06786,R06787,R07779 RC00236,RC01932 ko00000,ko00001,ko00002,ko01000 - - - FAD_binding_3 WXD2_k127_4334078_2 264198.Reut_A0415 7.87e-19 85.0 COG3387@1|root,COG3387@2|Bacteria,1MV08@1224|Proteobacteria,2VHBN@28216|Betaproteobacteria,1K0YU@119060|Burkholderiaceae 28216|Betaproteobacteria G PFAM glycoside hydrolase 15-related - - - - - - - - - - - - Glyco_hydro_15 WXD2_k127_4354379_1 861299.J421_1214 2.975e-15 91.0 COG1595@1|root,COG1595@2|Bacteria,1ZV5F@142182|Gemmatimonadetes 2|Bacteria K Sigma-70 region 2 - - - ko:K03088 - - - - ko00000,ko03021 - - - PD40,PQQ_2,Sigma70_r2,Sigma70_r4_2,WD40 WXD2_k127_4354379_0 203124.Tery_2811 6.676e-44 176.0 COG0457@1|root,COG0457@2|Bacteria,1G135@1117|Cyanobacteria,1H84Z@1150|Oscillatoriales 1117|Cyanobacteria U Tetratricopeptide repeat - - - - - - - - - - - - CHAT,TPR_12,TPR_7,TPR_8 WXD2_k127_436722_3 1379270.AUXF01000001_gene2079 6.149e-15 79.0 COG4319@1|root,COG4319@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - ABM,DUF3225,DUF4440,SnoaL_2,SnoaL_3 WXD2_k127_436722_5 1384066.JAGT01000001_gene267 9.785e-07 59.0 COG0745@1|root,COG0745@2|Bacteria,1TRS2@1239|Firmicutes,24AF1@186801|Clostridia,3WIJ9@541000|Ruminococcaceae 186801|Clostridia T Transcriptional regulatory protein, C terminal - - - - - - - - - - - - Response_reg,Trans_reg_C WXD2_k127_436722_4 1144319.PMI16_04944 4.476e-13 78.0 COG0745@1|root,COG0745@2|Bacteria,1N0YI@1224|Proteobacteria,2VHIS@28216|Betaproteobacteria,475UI@75682|Oxalobacteraceae 28216|Betaproteobacteria K Transcriptional regulatory protein, C terminal - - - ko:K02483,ko:K07666 ko02020,ko02024,map02020,map02024 M00453 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C WXD2_k127_436722_0 459349.CLOAM1490 5.86e-223 717.0 COG0449@1|root,COG0449@2|Bacteria,2NNWC@2323|unclassified Bacteria 2|Bacteria M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source - - 2.6.1.16 ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 - R00768 RC00010,RC00163,RC02752 ko00000,ko00001,ko01000,ko01002 - - - GATase_6,SIS WXD2_k127_436722_1 96561.Dole_1206 5.65e-52 197.0 COG1671@1|root,COG1671@2|Bacteria,1RCZA@1224|Proteobacteria,42SI7@68525|delta/epsilon subdivisions,2WPSJ@28221|Deltaproteobacteria,2MKCA@213118|Desulfobacterales 28221|Deltaproteobacteria S Uncharacterized BCR, YaiI/YqxD family COG1671 yaiI - - ko:K09768 - - - - ko00000 - - - DUF188 WXD2_k127_436722_2 1123255.JHYS01000003_gene2882 2.102e-47 178.0 COG0739@1|root,COG0739@2|Bacteria,1RK7E@1224|Proteobacteria,2WEXX@28216|Betaproteobacteria,4AHP4@80864|Comamonadaceae 28216|Betaproteobacteria M Peptidase family M23 - - - ko:K21472 - - - - ko00000,ko01000,ko01002,ko01011 - - - Peptidase_M23 WXD2_k127_4371957_0 880073.Calab_0813 2.262e-121 436.0 COG1199@1|root,COG1199@2|Bacteria 2|Bacteria L ATP-dependent helicase activity - - 3.6.4.12 ko:K10844 ko03022,ko03420,map03022,map03420 M00290 - - ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 - - - DEAD,DEAD_2,Helicase_C_2 WXD2_k127_4371957_2 1545915.JROG01000004_gene2610 9.873e-16 82.0 COG0745@1|root,COG0745@2|Bacteria,1RHDD@1224|Proteobacteria,2UA4W@28211|Alphaproteobacteria,2K5CB@204457|Sphingomonadales 204457|Sphingomonadales T response regulator - - - ko:K03413 ko02020,ko02030,map02020,map02030 M00506 - - ko00000,ko00001,ko00002,ko02022,ko02035 - - - Response_reg WXD2_k127_4371957_1 665942.HMPREF1022_02023 9.171e-100 342.0 COG0367@1|root,COG0367@2|Bacteria,1MW4E@1224|Proteobacteria,42MEI@68525|delta/epsilon subdivisions,2WJEG@28221|Deltaproteobacteria,2M88F@213115|Desulfovibrionales 28221|Deltaproteobacteria E TIGRFAM asparagine synthase (glutamine-hydrolyzing) - - 6.3.5.4 ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 - R00578 RC00010 ko00000,ko00001,ko01000,ko01002 - - - Asn_synthase,GATase_7 WXD2_k127_4391916_1 1123377.AUIV01000026_gene572 2.163e-06 59.0 COG0810@1|root,COG0810@2|Bacteria,1MZPX@1224|Proteobacteria,1S2VT@1236|Gammaproteobacteria,1XCIY@135614|Xanthomonadales 135614|Xanthomonadales M COG0810 Periplasmic protein TonB, links inner and outer membranes - - - ko:K03832 - - - - ko00000,ko02000 2.C.1.1 - - TonB_C WXD2_k127_4391916_0 518766.Rmar_2224 4.213e-155 497.0 COG0372@1|root,COG0372@2|Bacteria,4NFXK@976|Bacteroidetes,1FIQ8@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes C Belongs to the citrate synthase family gltA - 2.3.3.1 ko:K01647 ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00740 R00351 RC00004,RC00067 br01601,ko00000,ko00001,ko00002,ko01000 - - - Citrate_synt WXD2_k127_4398312_2 452637.Oter_4049 2.428e-78 275.0 COG0661@1|root,COG0661@2|Bacteria,46UJV@74201|Verrucomicrobia,3K7NS@414999|Opitutae 414999|Opitutae S ABC1 family - - - ko:K03688 - - - - ko00000 - - - ABC1 WXD2_k127_4398312_0 304371.MCP_1463 1.803e-177 564.0 COG0192@1|root,arCOG07444@2157|Archaea 2157|Archaea H S-adenosylmethionine synthetase, C-terminal domain metK - 2.5.1.6 ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 M00034,M00035,M00368,M00609 R00177,R04771 RC00021,RC01211 ko00000,ko00001,ko00002,ko01000 - - - S-AdoMet_synt_C,S-AdoMet_synt_M,S-AdoMet_synt_N WXD2_k127_4398312_4 661478.OP10G_3342 5.745e-11 76.0 COG1807@1|root,COG1807@2|Bacteria 2|Bacteria M 4-amino-4-deoxy-L-arabinose transferase activity - - - - - - - - - - - - PMT,PMT_2 WXD2_k127_4398312_1 936572.HMPREF1148_0210 8.623e-91 306.0 COG2877@1|root,COG2877@2|Bacteria,1TR2G@1239|Firmicutes,4H20D@909932|Negativicutes 909932|Negativicutes M Belongs to the KdsA family kdsA - 2.5.1.55 ko:K01627 ko00540,ko01100,map00540,map01100 M00063 R03254 RC00435 ko00000,ko00001,ko00002,ko01000,ko01005 - - - DAHP_synth_1 WXD2_k127_4398312_3 1267535.KB906767_gene621 2.885e-59 209.0 COG0504@1|root,COG0504@2|Bacteria,3Y2MH@57723|Acidobacteria,2JID4@204432|Acidobacteriia 204432|Acidobacteriia F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates pyrG - 6.3.4.2 ko:K01937 ko00240,ko01100,map00240,map01100 M00052 R00571,R00573 RC00010,RC00074 ko00000,ko00001,ko00002,ko01000 - - - CTP_synth_N,GATase WXD2_k127_4401586_2 639030.JHVA01000001_gene904 1.779e-19 94.0 COG0672@1|root,COG0672@2|Bacteria,3Y3XB@57723|Acidobacteria,2JI3D@204432|Acidobacteriia 204432|Acidobacteriia P PFAM Iron permease FTR1 - - - - - - - - - - - - DUF2318,FTR1 WXD2_k127_4401586_0 247490.KSU1_D0967 1.003e-42 162.0 COG0735@1|root,COG0735@2|Bacteria,2IZJY@203682|Planctomycetes 203682|Planctomycetes P Belongs to the Fur family - - - ko:K03711 - - - - ko00000,ko03000 - - - FUR WXD2_k127_4401586_1 1142394.PSMK_08700 2.051e-42 179.0 COG0457@1|root,COG3379@1|root,COG0457@2|Bacteria,COG3379@2|Bacteria,2IZQ0@203682|Planctomycetes 203682|Planctomycetes S PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - - - - - - - - - - Phosphodiest,Sulfotransfer_1 WXD2_k127_4401586_3 903818.KI912269_gene353 9.183e-10 65.0 2ET40@1|root,33KN7@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_4406382_1 357808.RoseRS_0250 7.719e-73 251.0 COG1011@1|root,COG1011@2|Bacteria,2G916@200795|Chloroflexi,377HS@32061|Chloroflexia 32061|Chloroflexia S PFAM Haloacid dehalogenase domain protein hydrolase - - 3.8.1.2 ko:K01560,ko:K07025 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 - R05287 RC00697 ko00000,ko00001,ko01000 - - - HAD_2 WXD2_k127_4406382_2 926569.ANT_23050 6.849e-62 227.0 COG1600@1|root,COG1600@2|Bacteria,2G6A0@200795|Chloroflexi 200795|Chloroflexi C 4Fe-4S double cluster binding domain - - 1.17.99.6 ko:K18979 - - - - ko00000,ko01000,ko03016 - - - DUF1730,Dehalogenase,Fer4_16,HEAT_2 WXD2_k127_4406382_4 247490.KSU1_C0103 1.592e-46 183.0 COG1408@1|root,COG1408@2|Bacteria,2J015@203682|Planctomycetes 203682|Planctomycetes S Calcineurin-like phosphoesterase - - - ko:K07098 - - - - ko00000 - - - Metallophos WXD2_k127_4406382_3 926692.AZYG01000067_gene2078 1.601e-50 196.0 COG0613@1|root,COG0613@2|Bacteria,1TPI5@1239|Firmicutes,248H2@186801|Clostridia,3WBHR@53433|Halanaerobiales 186801|Clostridia S DNA polymerase alpha chain like domain trpH - 3.1.3.97 ko:K07053 - - R00188,R11188 RC00078 ko00000,ko01000 - - - PHP WXD2_k127_4406382_0 706587.Desti_4083 1.034e-315 992.0 COG0060@1|root,COG0060@2|Bacteria,1MVBQ@1224|Proteobacteria,42MKB@68525|delta/epsilon subdivisions,2WJ4W@28221|Deltaproteobacteria,2MQ7V@213462|Syntrophobacterales 28221|Deltaproteobacteria J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) ileS - 6.1.1.5 ko:K01870 ko00970,map00970 M00359,M00360 R03656 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,tRNA-synt_1,zf-FPG_IleRS WXD2_k127_4406382_5 869209.Tresu_2066 1.081e-12 72.0 COG0739@1|root,COG1388@1|root,COG0739@2|Bacteria,COG1388@2|Bacteria,2J72G@203691|Spirochaetes 203691|Spirochaetes M LysM domain M23 M37 peptidase domain protein lysM - - ko:K06194 - - - - ko00000 1.A.34.1.2 - - Amidase_3,LysM,Peptidase_M23 WXD2_k127_4406661_0 316067.Geob_0790 0.0 1103.0 COG0542@1|root,COG0542@2|Bacteria,1MURH@1224|Proteobacteria,42M9S@68525|delta/epsilon subdivisions,2WJSZ@28221|Deltaproteobacteria,43S73@69541|Desulfuromonadales 28221|Deltaproteobacteria O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE clpB - - ko:K03695 ko04213,map04213 - - - ko00000,ko00001,ko03110 - - - AAA,AAA_2,ClpB_D2-small,Clp_N WXD2_k127_4406661_1 234267.Acid_3826 8.163e-32 131.0 COG1807@1|root,COG1807@2|Bacteria 2|Bacteria M 4-amino-4-deoxy-L-arabinose transferase activity - - - - - - - - - - - - Glyco_transf_22,PMT_2 WXD2_k127_4407350_1 448385.sce2453 3.712e-37 141.0 COG1166@1|root,COG1166@2|Bacteria,1MU80@1224|Proteobacteria,42M2B@68525|delta/epsilon subdivisions,2WJDZ@28221|Deltaproteobacteria,2YTWQ@29|Myxococcales 28221|Deltaproteobacteria H Catalyzes the biosynthesis of agmatine from arginine speA - 4.1.1.19 ko:K01585 ko00330,ko01100,map00330,map01100 M00133 R00566 RC00299 ko00000,ko00001,ko00002,ko01000 - - - Orn_Arg_deC_N WXD2_k127_4407350_2 1121920.AUAU01000002_gene2022 4.237e-12 77.0 COG0457@1|root,COG0457@2|Bacteria 1121920.AUAU01000002_gene2022|- S peptidyl-tyrosine sulfation - - - - - - - - - - - - - WXD2_k127_4407350_0 1279009.ADICEAN_00192 1.807e-133 436.0 COG0646@1|root,COG1410@1|root,COG0646@2|Bacteria,COG1410@2|Bacteria,4NFRF@976|Bacteroidetes,47K8Q@768503|Cytophagia 976|Bacteroidetes E Vitamin B12 dependent methionine synthase activation metH - 2.1.1.13 ko:K00548 ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230 M00017 R00946,R09365 RC00035,RC00113,RC01241 ko00000,ko00001,ko00002,ko01000 - - - B12-binding,B12-binding_2,Met_synt_B12,Pterin_bind,S-methyl_trans WXD2_k127_4417056_6 292564.Cyagr_1204 3.354e-34 137.0 COG1216@1|root,COG1216@2|Bacteria,1GIVG@1117|Cyanobacteria,22THI@167375|Cyanobium 1117|Cyanobacteria S N-terminal domain of galactosyltransferase - - - - - - - - - - - - Glyco_transf_7C,Glycos_transf_2 WXD2_k127_4417056_3 1496688.ER33_03630 1.441e-53 206.0 COG1215@1|root,COG1215@2|Bacteria,1GMNJ@1117|Cyanobacteria,22TKP@167375|Cyanobium 1117|Cyanobacteria M Glycosyltransferase like family 2 - - - - - - - - - - - - Glycos_transf_2 WXD2_k127_4417056_7 111780.Sta7437_0780 2.926e-28 124.0 COG2227@1|root,COG2227@2|Bacteria,1GC3M@1117|Cyanobacteria,3VKRZ@52604|Pleurocapsales 1117|Cyanobacteria H Tellurite resistance protein TehB - - 2.1.1.222,2.1.1.64 ko:K00568 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00117 R04988,R05614,R08769,R08781 RC00003,RC00392,RC01895 ko00000,ko00001,ko00002,ko01000 - - - Methyltransf_23 WXD2_k127_4417056_5 314345.SPV1_07446 2.798e-38 161.0 COG0110@1|root,COG0110@2|Bacteria,1N6SQ@1224|Proteobacteria 1224|Proteobacteria Q transferase, hexapeptide repeat - - - - - - - - - - - - Hexapep,Hexapep_2 WXD2_k127_4417056_1 306281.AJLK01000062_gene4963 2.395e-68 247.0 COG0438@1|root,COG0438@2|Bacteria,1G222@1117|Cyanobacteria,1JIU8@1189|Stigonemataceae 1117|Cyanobacteria M Glycosyl transferases group 1 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 WXD2_k127_4417056_2 1496688.ER33_03625 9.555e-59 228.0 COG1216@1|root,COG1216@2|Bacteria,1G0HY@1117|Cyanobacteria,22TGG@167375|Cyanobium 1117|Cyanobacteria M Glycosyltransferase like family 2 - - - - - - - - - - - - Glyco_tranf_2_3,Glycos_transf_2 WXD2_k127_4417056_4 314345.SPV1_00477 1.716e-53 207.0 2B8B9@1|root,33Q4Q@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_4417056_0 648757.Rvan_3115 7.85e-95 323.0 COG0438@1|root,COG0438@2|Bacteria,1MWEM@1224|Proteobacteria,2U1NW@28211|Alphaproteobacteria,3N8RC@45401|Hyphomicrobiaceae 28211|Alphaproteobacteria M Glycosyl transferases group 1 - - - - - - - - - - - - Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1 WXD2_k127_4417056_8 401053.AciPR4_0901 2.876e-12 78.0 COG0463@1|root,COG0463@2|Bacteria,3Y34G@57723|Acidobacteria,2JIGQ@204432|Acidobacteriia 204432|Acidobacteriia M PFAM Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 WXD2_k127_4418009_4 1463909.KL585972_gene3529 6.462e-08 66.0 COG1404@1|root,COG4935@1|root,COG1404@2|Bacteria,COG4935@2|Bacteria,2GJYH@201174|Actinobacteria 201174|Actinobacteria O Belongs to the peptidase S8 family - - - ko:K14645 ko02024,map02024 - - - ko00000,ko00001,ko01000,ko01002,ko03110 - - - LGFP,P_proprotein,Peptidase_S8 WXD2_k127_4418009_2 1122182.KB903834_gene5944 4.662e-46 190.0 COG3227@1|root,COG3227@2|Bacteria,2GN0P@201174|Actinobacteria,4D9AK@85008|Micromonosporales 201174|Actinobacteria E Fungalysin metallopeptidase (M36) - - - - - - - - - - - - FTP,Peptidase_M36 WXD2_k127_4418009_1 1128421.JAGA01000002_gene324 1.013e-53 214.0 COG0642@1|root,COG0784@1|root,COG5002@1|root,COG0784@2|Bacteria,COG2205@2|Bacteria,COG5002@2|Bacteria,2NQNP@2323|unclassified Bacteria 2|Bacteria T Domain present in phytochromes and cGMP-specific phosphodiesterases. chvG - 2.7.13.3 ko:K14980 ko02020,map02020 M00520 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HAMP,HATPase_c,HisKA,Sensor_TM1,Stimulus_sens_1 WXD2_k127_4418009_0 700598.Niako_1577 2.195e-62 227.0 COG1793@1|root,COG3285@1|root,COG1793@2|Bacteria,COG3285@2|Bacteria,4NESR@976|Bacteroidetes,1IQI9@117747|Sphingobacteriia 976|Bacteroidetes L DNA ligase - - 6.5.1.1 ko:K01971 ko03450,map03450 - R00381 RC00005 ko00000,ko00001,ko01000,ko03400 - - - DNA_ligase_A_C,DNA_ligase_A_M,LigD_N WXD2_k127_4418009_3 1128421.JAGA01000003_gene2958 3.951e-34 138.0 COG1051@1|root,COG1051@2|Bacteria 2|Bacteria F GDP-mannose mannosyl hydrolase activity - - - - - - - - - - - - NUDIX WXD2_k127_4434754_1 1227739.Hsw_0289 6.545e-65 244.0 COG1524@1|root,COG1524@2|Bacteria,4NE94@976|Bacteroidetes,47JP2@768503|Cytophagia 976|Bacteroidetes P type I phosphodiesterase nucleotide pyrophosphatase pafA GO:0003674,GO:0003824,GO:0004035,GO:0004346,GO:0005488,GO:0005575,GO:0005623,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008877,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0042578,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0046872,GO:0046914,GO:0050308,GO:0050309,GO:0098519 - - - - - - - - - - Phosphodiest WXD2_k127_4434754_2 1123366.TH3_16154 2.171e-62 226.0 COG2503@1|root,COG2503@2|Bacteria,1RB4N@1224|Proteobacteria,2U5IB@28211|Alphaproteobacteria,2JRQA@204441|Rhodospirillales 204441|Rhodospirillales S HAD superfamily, subfamily IIIB (Acid phosphatase) - - - - - - - - - - - - Acid_phosphat_B WXD2_k127_4434754_0 518766.Rmar_0330 9.502e-68 248.0 COG1629@1|root,COG4771@2|Bacteria,4NF66@976|Bacteroidetes,1FIX1@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes P CarboxypepD_reg-like domain - - - - - - - - - - - - CarboxypepD_reg,Plug,TonB_dep_Rec WXD2_k127_4444097_4 1123508.JH636443_gene5014 1.555e-24 121.0 COG0457@1|root,COG0457@2|Bacteria 1123508.JH636443_gene5014|- S peptidyl-tyrosine sulfation - - - - - - - - - - - - - WXD2_k127_4444097_0 204669.Acid345_1474 5.448e-135 441.0 COG1113@1|root,COG1113@2|Bacteria 2|Bacteria E amino acid transport - - - ko:K03294 - - - - ko00000 2.A.3.2 - - AA_permease_2 WXD2_k127_4444097_3 1318628.MARLIPOL_03970 1.631e-36 148.0 2EGRV@1|root,33AI1@2|Bacteria,1NJQM@1224|Proteobacteria,1SQI4@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_4444097_2 1385515.N791_07785 4.555e-73 272.0 29NMG@1|root,309JE@2|Bacteria,1RDNI@1224|Proteobacteria,1SMEH@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_4444097_1 661478.OP10G_1995 7.131e-84 295.0 COG0683@1|root,COG0683@2|Bacteria 2|Bacteria E ABC-type branched-chain amino acid transport systems, periplasmic component - - - ko:K01999 ko02010,ko02024,map02010,map02024 M00237 - - ko00000,ko00001,ko00002,ko02000 3.A.1.4 - - Peripla_BP_6 WXD2_k127_4444097_6 204669.Acid345_3561 0.0001778 54.0 COG2304@1|root,COG2304@2|Bacteria,3Y3QQ@57723|Acidobacteria,2JHV1@204432|Acidobacteriia 204432|Acidobacteriia S von Willebrand factor, type A - - - - - - - - - - - - VWA WXD2_k127_44446_6 1123376.AUIU01000016_gene208 1.103e-41 157.0 COG0771@1|root,COG0771@2|Bacteria,3J0HT@40117|Nitrospirae 40117|Nitrospirae M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) murD - 6.3.2.9 ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 - R02783 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase_C,Mur_ligase_M WXD2_k127_44446_4 204669.Acid345_3630 1.878e-83 293.0 COG0772@1|root,COG0772@2|Bacteria,3Y330@57723|Acidobacteria,2JHW0@204432|Acidobacteriia 204432|Acidobacteriia D Belongs to the SEDS family - - - ko:K03588 ko04112,map04112 - - - ko00000,ko00001,ko02000,ko03036 2.A.103.1 - - FTSW_RODA_SPOVE WXD2_k127_44446_3 1297742.A176_05138 4.161e-91 312.0 COG0707@1|root,COG0707@2|Bacteria,1MVIB@1224|Proteobacteria,42ME1@68525|delta/epsilon subdivisions,2WJNY@28221|Deltaproteobacteria,2YWEZ@29|Myxococcales 28221|Deltaproteobacteria M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) murG - 2.4.1.227 ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 - R05032,R05662 RC00005,RC00049 ko00000,ko00001,ko01000,ko01011 - GT28 - Glyco_tran_28_C,Glyco_transf_28 WXD2_k127_44446_2 1379698.RBG1_1C00001G0397 1.736e-113 381.0 COG0773@1|root,COG0773@2|Bacteria,2NNPU@2323|unclassified Bacteria 2|Bacteria M Belongs to the MurCDEF family murC GO:0000166,GO:0000270,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008763,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034645,GO:0035639,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0046872,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.8 ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 - R03193 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - iECP_1309.ECP_0093,iJN678.murC Mur_ligase,Mur_ligase_C,Mur_ligase_M WXD2_k127_44446_7 682795.AciX8_3874 9.396e-08 63.0 COG1589@1|root,COG1589@2|Bacteria,3Y3BQ@57723|Acidobacteria,2JIZS@204432|Acidobacteriia 204432|Acidobacteriia D Cell division protein FtsQ ftsQ - - ko:K03589 ko04112,map04112 - - - ko00000,ko00001,ko03036 - - - FtsQ,POTRA_1 WXD2_k127_44446_0 404380.Gbem_0496 5.931e-130 426.0 COG0849@1|root,COG0849@2|Bacteria,1MUSR@1224|Proteobacteria,42MS2@68525|delta/epsilon subdivisions,2WIQ0@28221|Deltaproteobacteria,43SXW@69541|Desulfuromonadales 28221|Deltaproteobacteria D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring ftsA - - ko:K03590 ko04112,map04112 - - - ko00000,ko00001,ko03036,ko04812 - - - FtsA,SHS2_FTSA WXD2_k127_44446_1 56780.SYN_00437 1.552e-126 417.0 COG0206@1|root,COG0206@2|Bacteria,1MV2X@1224|Proteobacteria,42MHK@68525|delta/epsilon subdivisions,2WJAZ@28221|Deltaproteobacteria,2MQ7W@213462|Syntrophobacterales 28221|Deltaproteobacteria D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity ftsZ - - ko:K03531 ko04112,map04112 - - - ko00000,ko00001,ko02048,ko03036,ko04812 - - - FtsZ_C,Tubulin WXD2_k127_44446_5 1336233.JAEH01000002_gene1343 1.128e-54 203.0 2DKWY@1|root,30NX3@2|Bacteria,1RBMB@1224|Proteobacteria,1S5SW@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_444881_1 1125863.JAFN01000001_gene2180 1.924e-60 223.0 COG0741@1|root,COG1388@1|root,COG0741@2|Bacteria,COG1388@2|Bacteria,1MWKE@1224|Proteobacteria,42M5C@68525|delta/epsilon subdivisions,2WJ54@28221|Deltaproteobacteria 28221|Deltaproteobacteria M Lytic transglycosylase catalytic mltD2 - - ko:K08307 - - - - ko00000,ko01000,ko01011 - - - LysM,SLT WXD2_k127_444881_0 1121920.AUAU01000004_gene908 6.694e-72 259.0 COG1100@1|root,COG1100@2|Bacteria 2|Bacteria S GTP binding - - - ko:K06883 - - - - ko00000 - - - DUF697,MMR_HSR1 WXD2_k127_444881_2 264732.Moth_0140 1.27e-16 89.0 COG5495@1|root,COG5495@2|Bacteria,1UZZU@1239|Firmicutes,249YF@186801|Clostridia,42G5H@68295|Thermoanaerobacterales 186801|Clostridia S NADP oxidoreductase coenzyme F420-dependent - - - - - - - - - - - - DUF2520,F420_oxidored,Rossmann-like WXD2_k127_4471210_2 240015.ACP_2502 1.505e-78 291.0 COG1136@1|root,COG1136@2|Bacteria,3Y2J0@57723|Acidobacteria,2JIKD@204432|Acidobacteriia 204432|Acidobacteriia V ABC transporter - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran WXD2_k127_4471210_1 1535422.ND16A_2589 2.48e-80 304.0 COG0577@1|root,COG0577@2|Bacteria,1NREW@1224|Proteobacteria,1RPKB@1236|Gammaproteobacteria,2Q618@267889|Colwelliaceae 1236|Gammaproteobacteria V MacB-like periplasmic core domain - - - - - - - - - - - - FtsX,MacB_PCD WXD2_k127_4471210_4 1183438.GKIL_2517 1.093e-64 237.0 COG0845@1|root,COG0845@2|Bacteria 2|Bacteria M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K02005 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 WXD2_k127_4471210_3 1267533.KB906736_gene963 1.804e-66 249.0 2E7DT@1|root,32XVH@2|Bacteria,3Y712@57723|Acidobacteria,2JMBI@204432|Acidobacteriia 204432|Acidobacteriia - - - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - - WXD2_k127_4471210_0 1267533.KB906736_gene962 8.213e-130 420.0 COG1131@1|root,COG1131@2|Bacteria,3Y7BR@57723|Acidobacteria,2JKD9@204432|Acidobacteriia 204432|Acidobacteriia V ABC transporter - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran WXD2_k127_4471210_5 1267533.KB906736_gene961 3.314e-50 181.0 COG1725@1|root,COG1725@2|Bacteria,3Y5VN@57723|Acidobacteria,2JK5T@204432|Acidobacteriia 2|Bacteria K helix_turn_helix gluconate operon transcriptional repressor ytrA - - ko:K07979 - - - - ko00000,ko03000 - - - GntR WXD2_k127_448476_2 204669.Acid345_1392 3.376e-117 401.0 COG2804@1|root,COG2804@2|Bacteria,3Y3GB@57723|Acidobacteria,2JHVF@204432|Acidobacteriia 2|Bacteria NU PFAM Type II secretion system protein E pilB - - ko:K02454,ko:K02504,ko:K02652 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02035,ko02044 3.A.15,3.A.15.2 - - T2SSE,T2SSE_N WXD2_k127_448476_0 204669.Acid345_1391 5.811e-172 561.0 COG2805@1|root,COG2805@2|Bacteria,3Y316@57723|Acidobacteria,2JIT4@204432|Acidobacteriia 204432|Acidobacteriia NU Type II/IV secretion system protein - - - ko:K02669 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - T2SSE WXD2_k127_448476_1 204669.Acid345_1390 2.657e-144 467.0 COG1459@1|root,COG1459@2|Bacteria,3Y2X8@57723|Acidobacteria,2JHIX@204432|Acidobacteriia 2|Bacteria NU PFAM Type II secretion system F domain pilC - - ko:K02653 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - T2SSF WXD2_k127_448476_3 1499967.BAYZ01000027_gene1787 1.16e-89 316.0 COG5000@1|root,COG5000@2|Bacteria,2NP6K@2323|unclassified Bacteria 2|Bacteria T His Kinase A (phosphoacceptor) domain pilS - 2.7.13.3 ko:K02668 ko02020,map02020 M00501 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035 - - - HATPase_c,HisKA,PAS,PAS_4,PAS_9 WXD2_k127_4486355_3 243090.RB5179 1.177e-45 171.0 COG0505@1|root,COG0505@2|Bacteria,2IWSY@203682|Planctomycetes 203682|Planctomycetes F Belongs to the CarA family carA GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - - CPSase_sm_chain,GATase WXD2_k127_4486355_2 1125863.JAFN01000001_gene3405 3.584e-66 241.0 COG4591@1|root,COG4591@2|Bacteria,1MVV7@1224|Proteobacteria,42MV0@68525|delta/epsilon subdivisions,2WITK@28221|Deltaproteobacteria 28221|Deltaproteobacteria M lipoprotein releasing system, transmembrane protein, LolC E family lolC - - ko:K09808 ko02010,map02010 M00255 - - ko00000,ko00001,ko00002,ko02000 3.A.1.125 - - FtsX,MacB_PCD WXD2_k127_4486355_1 631362.Thi970DRAFT_03022 1.461e-70 259.0 COG0737@1|root,COG0737@2|Bacteria,1MX03@1224|Proteobacteria,1SX52@1236|Gammaproteobacteria,1X227@135613|Chromatiales 135613|Chromatiales F 5'-nucleotidase, C-terminal domain - - - - - - - - - - - - 5_nucleotid_C WXD2_k127_4486355_0 886293.Sinac_6154 1.271e-154 545.0 COG2866@1|root,COG2866@2|Bacteria,2IXPH@203682|Planctomycetes 203682|Planctomycetes E PFAM Zinc carboxypeptidase - - - - - - - - - - - - Peptidase_M14 WXD2_k127_4489351_3 204669.Acid345_0279 4.163e-102 347.0 COG1570@1|root,COG1570@2|Bacteria,3Y3DP@57723|Acidobacteria,2JIQN@204432|Acidobacteriia 204432|Acidobacteriia L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides xseA - 3.1.11.6 ko:K03601 ko03430,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - Exonuc_VII_L,tRNA_anti_2 WXD2_k127_4489351_6 1121430.JMLG01000003_gene559 3.606e-13 74.0 COG1722@1|root,COG1722@2|Bacteria,1VK9I@1239|Firmicutes,24UH5@186801|Clostridia,2634U@186807|Peptococcaceae 186801|Clostridia L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides xseB - 3.1.11.6 ko:K03602 ko03430,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - Exonuc_VII_S WXD2_k127_4489351_4 264732.Moth_1513 5.725e-79 273.0 COG0142@1|root,COG0142@2|Bacteria,1TPQY@1239|Firmicutes,248DE@186801|Clostridia,42FIH@68295|Thermoanaerobacterales 186801|Clostridia H Belongs to the FPP GGPP synthase family ispA - 2.5.1.1,2.5.1.10,2.5.1.29 ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00364,M00366 R01658,R02003,R02061 RC00279 ko00000,ko00001,ko00002,ko01000,ko01006 - - - polyprenyl_synt WXD2_k127_4489351_0 243231.GSU0686 6.562e-225 714.0 COG1154@1|root,COG1154@2|Bacteria,1MUSJ@1224|Proteobacteria,42M35@68525|delta/epsilon subdivisions,2WIX5@28221|Deltaproteobacteria 28221|Deltaproteobacteria H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) dxs - 2.2.1.7 ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 M00096 R05636 RC00032 ko00000,ko00001,ko00002,ko01000 - - - DXP_synthase_N,Transket_pyr,Transketolase_C WXD2_k127_4489351_5 1242864.D187_002799 2.897e-76 267.0 COG1189@1|root,COG1189@2|Bacteria,1MWP5@1224|Proteobacteria,42R2J@68525|delta/epsilon subdivisions,2WIJ6@28221|Deltaproteobacteria,2YV01@29|Myxococcales 28221|Deltaproteobacteria J FtsJ-like methyltransferase tlyA - 2.1.1.226,2.1.1.227 ko:K06442 - - - - ko00000,ko01000,ko03009 - - - FtsJ,S4 WXD2_k127_4489351_2 267608.RSc2495 2.982e-114 377.0 COG1234@1|root,COG1234@2|Bacteria,1R64Z@1224|Proteobacteria,2VN9Y@28216|Betaproteobacteria,1K6AS@119060|Burkholderiaceae 28216|Betaproteobacteria S Beta-lactamase superfamily domain - - 3.1.26.11 ko:K00784 ko03013,map03013 - - - ko00000,ko00001,ko01000,ko03016 - - - Lactamase_B_2 WXD2_k127_4489351_1 535289.Dtpsy_2714 2.817e-128 420.0 COG4974@1|root,COG4974@2|Bacteria,1MVAN@1224|Proteobacteria,2VHUC@28216|Betaproteobacteria,4A9VK@80864|Comamonadaceae 28216|Betaproteobacteria L Belongs to the 'phage' integrase family - - - - - - - - - - - - Phage_int_SAM_4,Phage_integrase WXD2_k127_4499051_4 1267535.KB906767_gene5290 1.03e-41 161.0 COG0288@1|root,COG0288@2|Bacteria,3Y7V2@57723|Acidobacteria,2JMYT@204432|Acidobacteriia 204432|Acidobacteriia P Carbonic anhydrase - - 4.2.1.1 ko:K01673 ko00910,map00910 - R00132,R10092 RC02807 ko00000,ko00001,ko01000 - - - Pro_CA WXD2_k127_4499051_8 1381751.JAJB01000041_gene3036 3.79e-09 66.0 COG3340@1|root,COG3340@2|Bacteria,2GZK5@201174|Actinobacteria,4F8PH@85019|Brevibacteriaceae 201174|Actinobacteria E Peptidase family S51 - - - - - - - - - - - - Peptidase_S51 WXD2_k127_4499051_5 313624.NSP_12290 1.835e-34 141.0 COG4251@1|root,COG4251@2|Bacteria,1GHC4@1117|Cyanobacteria,1HK8D@1161|Nostocales 1117|Cyanobacteria T Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - - - - - - - - - - GAF,HATPase_c,HisKA,PAS_2,PHY WXD2_k127_4499051_7 1121127.JAFA01000006_gene5687 6.967e-22 102.0 COG0797@1|root,COG0797@2|Bacteria,1MZ8S@1224|Proteobacteria,2VJAN@28216|Betaproteobacteria,1K9J4@119060|Burkholderiaceae 28216|Betaproteobacteria M Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides rlpA - - ko:K03642 - - - - ko00000 - - - DPBB_1 WXD2_k127_4499051_6 1033734.CAET01000026_gene1017 1.221e-31 135.0 COG0741@1|root,COG0741@2|Bacteria,1V6DD@1239|Firmicutes,4HIWA@91061|Bacilli,1ZH33@1386|Bacillus 91061|Bacilli M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) yjbJ - - - - - - - - - - - SLT WXD2_k127_4499051_0 861299.J421_3672 5.292e-102 362.0 2EYW5@1|root,33S36@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_4499051_2 861299.J421_3671 5.122e-55 201.0 2F2ZI@1|root,33VUW@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_4499051_1 861299.J421_3670 8.838e-71 256.0 COG2367@1|root,COG2367@2|Bacteria 2|Bacteria V Beta-lactamase - - 3.4.11.2,3.5.2.6 ko:K01256,ko:K17836 ko00311,ko00480,ko01100,ko01130,ko01501,map00311,map00480,map01100,map01130,map01501 M00627,M00628 R00899,R04951,R06363 RC00096,RC00141,RC01499 ko00000,ko00001,ko00002,ko01000,ko01002,ko01504 - - - Beta-lactamase,Beta-lactamase2 WXD2_k127_4499051_9 1232428.CAVO010000055_gene1742 2.32e-07 53.0 COG0436@1|root,COG0436@2|Bacteria,1TP0J@1239|Firmicutes,4H2EV@909932|Negativicutes 909932|Negativicutes E Aminotransferase patA - - ko:K10907 - - - - ko00000,ko01000,ko01007 - - - Aminotran_1_2 WXD2_k127_4499051_3 1536769.P40081_07485 5.093e-46 179.0 COG0436@1|root,COG0436@2|Bacteria,1TP0J@1239|Firmicutes,4HA13@91061|Bacilli,26QZA@186822|Paenibacillaceae 91061|Bacilli E Catalyzes the transamination of the aromatic amino acid forming a ketoacid yugH - - ko:K10907 - - - - ko00000,ko01000,ko01007 - - - Aminotran_1_2 WXD2_k127_450248_2 357808.RoseRS_3205 3.677e-66 231.0 COG0604@1|root,COG0604@2|Bacteria,2G5MI@200795|Chloroflexi,376YR@32061|Chloroflexia 32061|Chloroflexia C PFAM Alcohol dehydrogenase zinc-binding domain protein - - - ko:K19745 ko00640,ko01100,map00640,map01100 - R00919 RC00095 ko00000,ko00001,ko01000 - - - ADH_N,ADH_zinc_N WXD2_k127_450248_3 670292.JH26_07885 5.101e-38 145.0 COG0604@1|root,COG0604@2|Bacteria,1MV3W@1224|Proteobacteria,2TRW7@28211|Alphaproteobacteria,1JSP9@119045|Methylobacteriaceae 28211|Alphaproteobacteria C quinone oxidoreductase, YhdH YhfP family MA20_42175 - - ko:K19745 ko00640,ko01100,map00640,map01100 - R00919 RC00095 ko00000,ko00001,ko01000 - - - ADH_N,ADH_zinc_N WXD2_k127_450248_1 1278073.MYSTI_05472 5.88e-107 356.0 COG0430@1|root,COG0430@2|Bacteria,1MX7Q@1224|Proteobacteria,42MZG@68525|delta/epsilon subdivisions,2WKZ3@28221|Deltaproteobacteria,2YTT5@29|Myxococcales 28221|Deltaproteobacteria A Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP rtcA - 6.5.1.4 ko:K01974 - - - - ko00000,ko01000 - - - RTC,RTC_insert WXD2_k127_450248_0 448385.sce7156 7.566e-199 625.0 COG1690@1|root,COG1690@2|Bacteria,1MUHA@1224|Proteobacteria,42PKM@68525|delta/epsilon subdivisions,2WJCP@28221|Deltaproteobacteria,2YUCG@29|Myxococcales 28221|Deltaproteobacteria S tRNA-splicing ligase RtcB rtcB - 6.5.1.3 ko:K14415 - - - - ko00000,ko01000,ko03016 - - - RtcB WXD2_k127_4504669_0 290397.Adeh_0985 3.434e-70 257.0 COG4784@1|root,COG4784@2|Bacteria,1QTT7@1224|Proteobacteria,43C89@68525|delta/epsilon subdivisions,2X7IN@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Peptidase family M48 - - - - - - - - - - - - Peptidase_M48 WXD2_k127_4504669_1 290397.Adeh_0314 3.742e-67 238.0 COG0599@1|root,COG0599@2|Bacteria,1QTWT@1224|Proteobacteria,43CBT@68525|delta/epsilon subdivisions,2X7MK@28221|Deltaproteobacteria 28221|Deltaproteobacteria O Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity ahpD - - ko:K04756 - - - - ko00000 - - - CMD WXD2_k127_4504669_2 290397.Adeh_0313 3.837e-65 228.0 COG0450@1|root,COG0450@2|Bacteria,1MWPY@1224|Proteobacteria,42MAJ@68525|delta/epsilon subdivisions,2WP90@28221|Deltaproteobacteria,2YVP3@29|Myxococcales 28221|Deltaproteobacteria O Alkyl hydroperoxide reductase prx-1 - 1.11.1.15 ko:K03386 ko04214,map04214 - - - ko00000,ko00001,ko01000,ko04147 - - - 1-cysPrx_C,AhpC-TSA WXD2_k127_4504669_4 903818.KI912268_gene3050 2.934e-31 127.0 COG0735@1|root,COG0735@2|Bacteria,3Y7UH@57723|Acidobacteria 57723|Acidobacteria P Ferric uptake regulator family - - - ko:K09825 - - - - ko00000,ko03000 - - - FUR WXD2_k127_4504669_3 861299.J421_1529 1.44e-34 143.0 COG1191@1|root,COG1191@2|Bacteria,1ZV0H@142182|Gemmatimonadetes 142182|Gemmatimonadetes K sigma factor activity - - - ko:K02405 ko02020,ko02025,ko02026,ko02040,ko05111,map02020,map02025,map02026,map02040,map05111 - - - ko00000,ko00001,ko02035,ko03021 - - - - WXD2_k127_4504669_5 204669.Acid345_4245 4.768e-05 54.0 COG0457@1|root,COG0457@2|Bacteria,3Y85C@57723|Acidobacteria 57723|Acidobacteria S Tetratricopeptide repeat - - - - - - - - - - - - - WXD2_k127_453354_2 204536.SULAZ_0559 4.905e-07 61.0 COG3063@1|root,COG3063@2|Bacteria,2G55J@200783|Aquificae 200783|Aquificae NU Tetratricopeptide repeat - - - - - - - - - - - - TPR_1,TPR_2,TPR_8 WXD2_k127_453354_1 234267.Acid_5283 8.38e-90 318.0 COG0436@1|root,COG0436@2|Bacteria,3Y2VQ@57723|Acidobacteria 57723|Acidobacteria E PFAM Aminotransferase class I and II - - - - - - - - - - - - Aminotran_1_2 WXD2_k127_453354_0 1192034.CAP_5423 3.086e-154 496.0 COG0520@1|root,COG0520@2|Bacteria,1MXH1@1224|Proteobacteria,43203@68525|delta/epsilon subdivisions,2WWMI@28221|Deltaproteobacteria,2YTY1@29|Myxococcales 28221|Deltaproteobacteria E DegT/DnrJ/EryC1/StrS aminotransferase family cefD - 5.1.1.17 ko:K04127 ko00311,ko01100,ko01130,map00311,map01100,map01130 M00673 R04147 RC00302 ko00000,ko00001,ko00002,ko01000 - - - Aminotran_5 WXD2_k127_4534470_17 1230342.CTM_19149 2.722e-11 75.0 COG0657@1|root,COG0657@2|Bacteria,1UFB9@1239|Firmicutes,24DFS@186801|Clostridia,36HTV@31979|Clostridiaceae 186801|Clostridia I Dienelactone hydrolase family - - - - - - - - - - - - DLH WXD2_k127_4534470_13 472759.Nhal_3354 2.24e-33 138.0 COG0845@1|root,COG0845@2|Bacteria,1MU8D@1224|Proteobacteria,1RN0E@1236|Gammaproteobacteria,1WXMI@135613|Chromatiales 135613|Chromatiales M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K02005 - - - - ko00000 - - - HlyD_3,HlyD_D23 WXD2_k127_4534470_9 522306.CAP2UW1_4289 2.381e-78 269.0 COG0845@1|root,COG0845@2|Bacteria,1MU8D@1224|Proteobacteria,2VJR5@28216|Betaproteobacteria 28216|Betaproteobacteria M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K02005 - - - - ko00000 - - - HlyD_D23 WXD2_k127_4534470_8 1485544.JQKP01000002_gene1414 1.875e-88 297.0 COG1136@1|root,COG1136@2|Bacteria,1MU45@1224|Proteobacteria,2VJBY@28216|Betaproteobacteria,44VNJ@713636|Nitrosomonadales 28216|Betaproteobacteria V ABC transporter - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran WXD2_k127_4534470_6 1485544.JQKP01000002_gene1415 3.533e-118 393.0 COG0577@1|root,COG0577@2|Bacteria,1PBKH@1224|Proteobacteria,2VIIH@28216|Betaproteobacteria,44V5Z@713636|Nitrosomonadales 28216|Betaproteobacteria V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD WXD2_k127_4534470_2 357804.Ping_3708 3.232e-132 433.0 COG0577@1|root,COG0577@2|Bacteria,1PBKH@1224|Proteobacteria,1T1FT@1236|Gammaproteobacteria,2QJ8J@267894|Psychromonadaceae 1236|Gammaproteobacteria V MacB-like periplasmic core domain VP1997 - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD WXD2_k127_4534470_5 32057.KB217478_gene784 5.798e-124 419.0 COG2374@1|root,COG2931@1|root,COG3391@1|root,COG3540@1|root,COG4222@1|root,COG4247@1|root,COG2374@2|Bacteria,COG2931@2|Bacteria,COG3391@2|Bacteria,COG3540@2|Bacteria,COG4222@2|Bacteria,COG4247@2|Bacteria,1G0YK@1117|Cyanobacteria,1HM71@1161|Nostocales 1117|Cyanobacteria Q phosphatase - - 3.1.3.8 ko:K01083,ko:K07004 ko00562,map00562 - R03371 RC00078 ko00000,ko00001,ko01000 - - - 5_nucleotid_C,Calx-beta,DUF4114,Exo_endo_phos,LTD,Phytase-like WXD2_k127_4534470_15 224324.aq_2194 3.472e-20 106.0 COG1999@1|root,COG1999@2|Bacteria 2|Bacteria M signal sequence binding - - - ko:K07152 - - - - ko00000,ko03029 - - - SCO1-SenC WXD2_k127_4534470_0 925409.KI911562_gene954 6.297e-196 627.0 COG0843@1|root,COG0843@2|Bacteria,4P06K@976|Bacteroidetes 976|Bacteroidetes C Cytochrome C oxidase subunit I - - 1.9.3.1 ko:K02274 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.2,3.D.4.3,3.D.4.4,3.D.4.6 - - COX1 WXD2_k127_4534470_16 641524.ADICYQ_3296 6.968e-14 82.0 COG2010@1|root,COG2133@1|root,COG2010@2|Bacteria,COG2133@2|Bacteria,4NKGP@976|Bacteroidetes,47M97@768503|Cytophagia 976|Bacteroidetes C pyrroloquinoline quinone binding - - - - - - - - - - - - Cytochrom_C WXD2_k127_4534470_11 608538.HTH_1485 8.884e-44 171.0 COG1622@1|root,COG1622@2|Bacteria 2|Bacteria C oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor cbaB GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.9.3.1 ko:K02275 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.2,3.D.4.4,3.D.4.6 - - COX2,COX2-transmemb WXD2_k127_4534470_7 1340493.JNIF01000003_gene3330 1.129e-91 303.0 COG3865@1|root,COG3865@2|Bacteria,3Y4UB@57723|Acidobacteria 57723|Acidobacteria H 3-demethylubiquinone-9 3-methyltransferase - - 2.1.1.222,2.1.1.64 ko:K00568 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00117 R04988,R05614,R08769,R08781 RC00003,RC00392,RC01895 ko00000,ko00001,ko00002,ko01000 - - - 3-dmu-9_3-mt WXD2_k127_4534470_12 1034943.BN1094_01547 2.547e-37 149.0 COG1309@1|root,COG1309@2|Bacteria,1N6WG@1224|Proteobacteria,1SCAJ@1236|Gammaproteobacteria,1JGDQ@118969|Legionellales 118969|Legionellales K Bacterial regulatory proteins, tetR family - - - ko:K16137 - - - - ko00000,ko03000 - - - TetR_N WXD2_k127_4534470_10 1268072.PSAB_09070 2.543e-66 231.0 COG1335@1|root,COG1335@2|Bacteria,1UYRQ@1239|Firmicutes,4HCEI@91061|Bacilli,2760X@186822|Paenibacillaceae 91061|Bacilli Q Isochorismatase family - - - - - - - - - - - - Isochorismatase WXD2_k127_4534470_14 1304284.L21TH_1635 6.037e-28 126.0 COG2267@1|root,COG2267@2|Bacteria,1V049@1239|Firmicutes,25F0M@186801|Clostridia,36UU9@31979|Clostridiaceae 186801|Clostridia I Ndr family - - - - - - - - - - - - Abhydrolase_1 WXD2_k127_4534470_1 365044.Pnap_1660 9.984e-143 467.0 COG0477@1|root,COG2814@2|Bacteria,1QUAS@1224|Proteobacteria,2W0X0@28216|Betaproteobacteria,4AJVZ@80864|Comamonadaceae 28216|Betaproteobacteria EGP Major facilitator superfamily MFS_1 - - - ko:K08169 - - - - ko00000,ko02000 2.A.1.3.17 - - MFS_1,MFS_3 WXD2_k127_4534470_3 365044.Pnap_1659 5.235e-132 430.0 COG0583@1|root,COG0583@2|Bacteria,1N663@1224|Proteobacteria,2VK1P@28216|Betaproteobacteria,4AE0Y@80864|Comamonadaceae 28216|Betaproteobacteria K Transcriptional regulator, LysR family - - - - - - - - - - - - HTH_1,LysR_substrate WXD2_k127_4534470_4 234267.Acid_0873 2.483e-129 441.0 COG0457@1|root,COG0515@1|root,COG5616@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,COG5616@2|Bacteria,3Y6VR@57723|Acidobacteria 57723|Acidobacteria KLT Protein tyrosine kinase - - 2.7.11.1 ko:K08282,ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase WXD2_k127_4545581_1 240015.ACP_2579 3.173e-18 92.0 COG3468@1|root,COG3468@2|Bacteria,3Y4BG@57723|Acidobacteria,2JJ56@204432|Acidobacteriia 204432|Acidobacteriia MU outer membrane autotransporter barrel domain protein - - - - - - - - - - - - - WXD2_k127_4545581_0 1340493.JNIF01000003_gene1293 6.581e-82 294.0 COG1716@1|root,COG2203@1|root,COG2208@1|root,COG1716@2|Bacteria,COG2203@2|Bacteria,COG2208@2|Bacteria,3Y4DC@57723|Acidobacteria 57723|Acidobacteria T Inner membrane component of T3SS, cytoplasmic domain - - - - - - - - - - - - FHA,GAF_3,SpoIIE WXD2_k127_4545581_3 395494.Galf_2609 0.0006339 46.0 COG3668@1|root,COG3668@2|Bacteria,1PJWP@1224|Proteobacteria,2W88C@28216|Betaproteobacteria,44WJ0@713636|Nitrosomonadales 28216|Betaproteobacteria S PFAM plasmid stabilization system - - - - - - - - - - - - ParE_toxin WXD2_k127_4545581_2 314278.NB231_17203 3.416e-12 68.0 2DRAI@1|root,33AYP@2|Bacteria,1NJXU@1224|Proteobacteria,1SHXT@1236|Gammaproteobacteria,1WZT8@135613|Chromatiales 135613|Chromatiales - - - - - - - - - - - - - - - WXD2_k127_4567287_2 1123368.AUIS01000028_gene1325 1.808e-22 105.0 COG0845@1|root,COG0845@2|Bacteria,1PDUT@1224|Proteobacteria,1RQKD@1236|Gammaproteobacteria 1236|Gammaproteobacteria M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K02005,ko:K13888 - M00709 - - ko00000,ko00002,ko02000 8.A.1 - - HlyD_3,HlyD_D23,OEP WXD2_k127_4567287_0 489825.LYNGBM3L_63180 7.453e-265 849.0 COG0577@1|root,COG0577@2|Bacteria,1G0Z7@1117|Cyanobacteria,1H9BF@1150|Oscillatoriales 1117|Cyanobacteria V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD WXD2_k127_4567287_1 118173.KB235910_gene4617 1.6e-110 361.0 COG1136@1|root,COG1136@2|Bacteria,1G4IP@1117|Cyanobacteria,1HA7Y@1150|Oscillatoriales 1117|Cyanobacteria V ATPases associated with a variety of cellular activities - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran WXD2_k127_4570144_3 1415756.JQMY01000001_gene503 9.579e-70 242.0 COG0445@1|root,COG0445@2|Bacteria,1MU6F@1224|Proteobacteria,2TRJS@28211|Alphaproteobacteria,2PDU2@252301|Oceanicola 28211|Alphaproteobacteria D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 gidA GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - ko:K03495 - - R08701 RC00053,RC00209,RC00870 ko00000,ko03016,ko03036 - - - GIDA,GIDA_assoc WXD2_k127_4570144_1 1123257.AUFV01000003_gene1044 4.005e-95 328.0 COG0486@1|root,COG0486@2|Bacteria,1MUCQ@1224|Proteobacteria,1RN5S@1236|Gammaproteobacteria,1X3DW@135614|Xanthomonadales 135614|Xanthomonadales J Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 mnmE - - ko:K03650 - - R08701 RC00053,RC00209,RC00870 ko00000,ko01000,ko03016 - - - MMR_HSR1,MnmE_helical,TrmE_N WXD2_k127_4570144_6 568816.Acin_2450 6.251e-16 88.0 COG1847@1|root,COG1847@2|Bacteria,1V3IN@1239|Firmicutes,4H41I@909932|Negativicutes 909932|Negativicutes S R3H domain protein jag - - ko:K06346 - - - - ko00000 - - - Jag_N,KH_4,R3H WXD2_k127_4570144_2 1047013.AQSP01000133_gene2153 2.697e-81 293.0 COG0706@1|root,COG0706@2|Bacteria,2NP6C@2323|unclassified Bacteria 2|Bacteria U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins yidC GO:0002790,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022607,GO:0031224,GO:0031226,GO:0032940,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051205,GO:0051234,GO:0051259,GO:0051260,GO:0051641,GO:0061024,GO:0065003,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044,ko03029 2.A.9 - - 60KD_IMP,YidC_periplas WXD2_k127_4570144_5 43989.cce_0746 3.245e-27 114.0 COG0759@1|root,COG0759@2|Bacteria,1G90B@1117|Cyanobacteria,3KIEZ@43988|Cyanothece 1117|Cyanobacteria S Could be involved in insertion of integral membrane proteins into the membrane - - - ko:K08998 - - - - ko00000 - - - Haemolytic WXD2_k127_4570144_8 309803.CTN_1030 3.172e-11 74.0 COG0594@1|root,COG0594@2|Bacteria,2GDAX@200918|Thermotogae 200918|Thermotogae J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme rnpA - 3.1.26.5 ko:K03536 - - - - ko00000,ko01000,ko03016 - - - Ribonuclease_P WXD2_k127_4570144_7 644966.Tmar_2374 1.785e-11 68.0 COG0230@1|root,COG0230@2|Bacteria 2|Bacteria J Ribosomal protein L34 rpmH GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02914 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L34 WXD2_k127_4570144_0 204669.Acid345_0001 2.091e-132 435.0 COG0593@1|root,COG0593@2|Bacteria,3Y2HA@57723|Acidobacteria,2JHN7@204432|Acidobacteriia 204432|Acidobacteriia L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids dnaA - - ko:K02313 ko02020,ko04112,map02020,map04112 - - - ko00000,ko00001,ko03032,ko03036 - - - Bac_DnaA,Bac_DnaA_C,DnaA_N WXD2_k127_4570144_4 234267.Acid_0002 6.704e-45 170.0 COG0592@1|root,COG0592@2|Bacteria,3Y2WE@57723|Acidobacteria 57723|Acidobacteria L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria - - 2.7.7.7 ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_beta,DNA_pol3_beta_2,DNA_pol3_beta_3 WXD2_k127_457897_5 436229.JOEH01000041_gene6345 3.743e-25 107.0 COG3845@1|root,COG3845@2|Bacteria,2H7KJ@201174|Actinobacteria,2NGI5@228398|Streptacidiphilus 201174|Actinobacteria S ATPases associated with a variety of cellular activities yufO - 3.6.3.17 ko:K02056 - M00221 - - ko00000,ko00002,ko01000,ko02000 3.A.1.2 - - ABC_tran WXD2_k127_457897_2 1379270.AUXF01000002_gene1216 1.652e-65 240.0 COG4603@1|root,COG4603@2|Bacteria,1ZTGR@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Branched-chain amino acid transport system / permease component - - - ko:K02057 - M00221 - - ko00000,ko00002,ko02000 3.A.1.2 - - BPD_transp_2 WXD2_k127_457897_3 42256.RradSPS_0109 1.596e-47 192.0 COG1079@1|root,COG1079@2|Bacteria,2GKMB@201174|Actinobacteria,4CPYV@84995|Rubrobacteria 84995|Rubrobacteria S Belongs to the binding-protein-dependent transport system permease family - - - ko:K02057 - M00221 - - ko00000,ko00002,ko02000 3.A.1.2 - - BPD_transp_2 WXD2_k127_457897_6 485918.Cpin_6804 1.111e-20 97.0 2CK2Y@1|root,32SBF@2|Bacteria,4NTZD@976|Bacteroidetes,1ITGQ@117747|Sphingobacteriia 976|Bacteroidetes S PFAM Photosynthetic reaction centre cytochrome C subunit - - - ko:K13992 - - - - ko00000,ko00194 - - - CytoC_RC WXD2_k127_457897_4 485913.Krac_6823 2.863e-45 170.0 COG4770@1|root,COG4770@2|Bacteria,2GBIE@200795|Chloroflexi 200795|Chloroflexi I Carbamoyl-phosphate synthetase large chain domain protein - - 6.4.1.4 ko:K01968 ko00280,ko01100,map00280,map01100 M00036 R04138 RC00367,RC00942 ko00000,ko00001,ko00002,ko01000 - - - Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2 WXD2_k127_457897_0 861208.AGROH133_11615 2.385e-109 363.0 COG4770@1|root,COG4770@2|Bacteria,1P6RE@1224|Proteobacteria,2TRC2@28211|Alphaproteobacteria,4B9J8@82115|Rhizobiaceae 28211|Alphaproteobacteria I carboxylase MA20_30205 - 6.4.1.4 ko:K01968 ko00280,ko01100,map00280,map01100 M00036 R04138 RC00367,RC00942 ko00000,ko00001,ko00002,ko01000 - - - Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2 WXD2_k127_457897_1 1128421.JAGA01000002_gene1141 1.061e-73 256.0 COG1024@1|root,COG1024@2|Bacteria,2NR3A@2323|unclassified Bacteria 2|Bacteria I Enoyl-CoA hydratase/isomerase atuE - 4.2.1.18,4.2.1.57 ko:K13766,ko:K13779 ko00280,ko00281,ko01100,map00280,map00281,map01100 M00036 R02085,R03493 RC00941,RC02416 ko00000,ko00001,ko00002,ko01000 - - - ECH_1 WXD2_k127_4586751_0 247490.KSU1_C0858 1.55e-64 231.0 COG1721@1|root,COG1721@2|Bacteria,2IXT7@203682|Planctomycetes 203682|Planctomycetes S protein (some members contain a von Willebrand factor type A (vWA) domain) - - - - - - - - - - - - DUF58 WXD2_k127_4586751_1 880073.Calab_2474 2.243e-60 230.0 COG2304@1|root,COG2304@2|Bacteria,2NNYH@2323|unclassified Bacteria 2|Bacteria NU von Willebrand factor (vWF) type A domain batA - - ko:K07114,ko:K12511 - - - - ko00000,ko02000,ko02044 1.A.13.2.2,1.A.13.2.3 - - BatA,VWA WXD2_k127_4586751_2 1216967.L100_05651 2.456e-19 103.0 COG2304@1|root,COG2304@2|Bacteria,4NF7Y@976|Bacteroidetes,1HYES@117743|Flavobacteriia,34Q5K@308865|Elizabethkingia 976|Bacteroidetes S von Willebrand factor (vWF) type A domain batB - - ko:K07114 - - - - ko00000,ko02000 1.A.13.2.2,1.A.13.2.3 - - BatA,VWA,VWA_2 WXD2_k127_4586751_3 883158.HMPREF9140_00087 6.426e-05 53.0 COG0457@1|root,COG0457@2|Bacteria,4NH2K@976|Bacteroidetes 976|Bacteroidetes M tetratricopeptide repeat batC - - - - - - - - - - - TPR_1,TPR_11,TPR_16,TPR_17,TPR_2,TPR_8 WXD2_k127_4589332_1 1378168.N510_00620 8.761e-18 92.0 COG1595@1|root,COG1595@2|Bacteria,1TS3M@1239|Firmicutes 1239|Firmicutes K Belongs to the sigma-70 factor family. ECF subfamily algU - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 WXD2_k127_4589332_0 378806.STAUR_1288 4.387e-67 242.0 COG3358@1|root,COG3358@2|Bacteria,1RBIA@1224|Proteobacteria,4384Y@68525|delta/epsilon subdivisions,2X9XK@28221|Deltaproteobacteria,2YVS9@29|Myxococcales 28221|Deltaproteobacteria S Protein of unknown function (DUF1684) - - - ko:K09164 - - - - ko00000 - - - DUF1684 WXD2_k127_4590196_1 1353529.M899_0208 1.253e-50 203.0 COG2010@1|root,COG2010@2|Bacteria,1RJJ2@1224|Proteobacteria,42SCM@68525|delta/epsilon subdivisions,2MUN1@213481|Bdellovibrionales,2WPS4@28221|Deltaproteobacteria 213481|Bdellovibrionales C Cytochrome c pcmF - - - - - - - - - - - Cytochrom_C,Cytochrome_CBB3 WXD2_k127_4590196_0 1123242.JH636438_gene5694 5.953e-111 372.0 COG1290@1|root,COG1290@2|Bacteria,2IYI0@203682|Planctomycetes 203682|Planctomycetes C Cytochrome b(C-terminal)/b6/petD - - - - - - - - - - - - Cytochrom_B_C WXD2_k127_4590196_2 886293.Sinac_1830 1.026e-21 95.0 COG1290@1|root,COG1290@2|Bacteria,2IX3Q@203682|Planctomycetes 203682|Planctomycetes C Domain of unknown function (DUF4405) - - - - - - - - - - - - Cytochrome_B WXD2_k127_4597681_1 1380394.JADL01000003_gene4940 4.785e-34 136.0 COG4221@1|root,COG4221@2|Bacteria,1QW75@1224|Proteobacteria,2TWQR@28211|Alphaproteobacteria 28211|Alphaproteobacteria S KR domain MA20_16520 - - - - - - - - - - - adh_short_C2 WXD2_k127_4597681_4 1453500.AT05_08885 3.163e-16 84.0 COG1595@1|root,COG1595@2|Bacteria,4NPSM@976|Bacteroidetes 976|Bacteroidetes K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 WXD2_k127_4597681_0 1267535.KB906767_gene1535 1.98e-87 308.0 COG3595@1|root,COG3595@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - DUF4097 WXD2_k127_4597681_3 768671.ThimaDRAFT_4875 9.107e-20 100.0 2DR3D@1|root,339ZZ@2|Bacteria,1QT81@1224|Proteobacteria,1SU5M@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_4616894_3 1408444.JHYC01000001_gene1149 1.16e-23 103.0 COG3952@1|root,COG3952@2|Bacteria,1MZ60@1224|Proteobacteria,1S8XM@1236|Gammaproteobacteria,1JF2T@118969|Legionellales 118969|Legionellales S Lipid A Biosynthesis N-terminal domain - - - - - - - - - - - - LAB_N WXD2_k127_4616894_0 880073.Calab_0900 2.939e-47 179.0 COG2078@1|root,COG2078@2|Bacteria,2NPQ0@2323|unclassified Bacteria 2|Bacteria S AMMECR1 - - - ko:K06990,ko:K09141 - - - - ko00000,ko04812 - - - AMMECR1,Memo WXD2_k127_4616894_1 1444310.JANV01000205_gene652 8.685e-37 151.0 COG0741@1|root,COG1196@1|root,COG4942@1|root,COG0741@2|Bacteria,COG1196@2|Bacteria,COG4942@2|Bacteria,1V6DD@1239|Firmicutes,4HIWA@91061|Bacilli,1ZH33@1386|Bacillus 91061|Bacilli M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - - - - - - - - - - Peptidase_M23,PhageMin_Tail,SLT WXD2_k127_4616894_2 1121920.AUAU01000014_gene2832 3.963e-32 140.0 COG1652@1|root,COG1652@2|Bacteria 2|Bacteria S positive regulation of growth rate - - - - - - - - - - - - CW_binding_2,LysM WXD2_k127_4653572_0 357808.RoseRS_1829 2.224e-168 538.0 COG0205@1|root,COG0205@2|Bacteria,2G6CJ@200795|Chloroflexi,374WW@32061|Chloroflexia 32061|Chloroflexia F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis pfkA - 2.7.1.11,2.7.1.90 ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130 - R00756,R00764,R02073,R03236,R04779 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PFK WXD2_k127_4653572_1 1515746.HR45_11315 2.316e-74 285.0 COG3303@1|root,COG3303@2|Bacteria,1NNDS@1224|Proteobacteria 1224|Proteobacteria C Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - - - - - - - - - - - WXD2_k127_4657811_5 204669.Acid345_4730 3.076e-12 72.0 COG0664@1|root,COG4420@1|root,COG0664@2|Bacteria,COG4420@2|Bacteria,3Y2H3@57723|Acidobacteria,2JHTN@204432|Acidobacteriia 2|Bacteria T cyclic nucleotide-binding yejC - - ko:K10914 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 - - - ko00000,ko00001,ko03000 - - - DUF1003 WXD2_k127_4657811_2 886293.Sinac_1729 2.478e-78 277.0 COG0501@1|root,COG0501@2|Bacteria,2J0GY@203682|Planctomycetes 203682|Planctomycetes O CAAX prenyl protease N-terminal, five membrane helices - - - - - - - - - - - - Peptidase_M48,Peptidase_M48_N WXD2_k127_4657811_1 240016.ABIZ01000001_gene3654 4.212e-146 473.0 COG0513@1|root,COG0513@2|Bacteria,46S5M@74201|Verrucomicrobia,2IU0Y@203494|Verrucomicrobiae 203494|Verrucomicrobiae L helicase superfamily c-terminal domain - - - - - - - - - - - - DEAD,Helicase_C WXD2_k127_4657811_0 1267535.KB906767_gene3391 3.1e-203 649.0 COG0488@1|root,COG0488@2|Bacteria,3Y2H0@57723|Acidobacteria,2JI7S@204432|Acidobacteriia 204432|Acidobacteriia S ABC transporter - - - ko:K15738 - - - - ko00000,ko02000 3.A.1.120.6 - - ABC_tran,ABC_tran_CTD,ABC_tran_Xtn WXD2_k127_4657811_6 204669.Acid345_4688 3.085e-12 80.0 COG1595@1|root,COG1595@2|Bacteria,3Y857@57723|Acidobacteria,2JN8U@204432|Acidobacteriia 204432|Acidobacteriia K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 WXD2_k127_4657811_3 1382306.JNIM01000001_gene1969 4.881e-47 181.0 COG0350@1|root,COG2169@1|root,COG0350@2|Bacteria,COG2169@2|Bacteria 2|Bacteria K sequence-specific DNA binding ogt - 2.1.1.63,3.2.2.21 ko:K00567,ko:K13529,ko:K15051 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03000,ko03400 - - - Ada_Zn_binding,AraC_binding,DNA_binding_1,Endonuclea_NS_2,HTH_18 WXD2_k127_4657811_4 1380394.JADL01000003_gene4838 2.641e-21 107.0 COG2208@1|root,COG2208@2|Bacteria,1MXJQ@1224|Proteobacteria,2VEZQ@28211|Alphaproteobacteria,2JRJA@204441|Rhodospirillales 204441|Rhodospirillales KT Sigma factor PP2C-like phosphatases - - 3.1.3.3 ko:K07315 - - - - ko00000,ko01000,ko03021 - - - HAMP,SpoIIE WXD2_k127_4664774_2 234267.Acid_1273 4.371e-89 306.0 COG4585@1|root,COG4585@2|Bacteria,3Y42D@57723|Acidobacteria 57723|Acidobacteria T Histidine kinase - - 2.7.13.3 ko:K07778 ko02020,map02020 M00479 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HisKA_3 WXD2_k127_4664774_3 926560.KE387026_gene4177 9.655e-83 299.0 COG2197@1|root,COG2197@2|Bacteria,1WM1U@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus T helix_turn_helix, Lux Regulon - - - ko:K07693 ko02020,map02020 M00479 - - ko00000,ko00001,ko00002,ko02022 - - - GerE,Response_reg WXD2_k127_4664774_1 1242864.D187_004923 2.052e-90 313.0 COG0737@1|root,COG0737@2|Bacteria,1MX03@1224|Proteobacteria,42Q71@68525|delta/epsilon subdivisions,2WK8Q@28221|Deltaproteobacteria,2YWC2@29|Myxococcales 28221|Deltaproteobacteria F 5'-nucleotidase, C-terminal domain - - 3.1.3.5,3.6.1.45 ko:K11751 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 - R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346 RC00017 ko00000,ko00001,ko01000 - - - 5_nucleotid_C,Metallophos WXD2_k127_4664774_5 1122609.AUGT01000018_gene109 3.583e-05 55.0 COG3468@1|root,COG3468@2|Bacteria,2HCJX@201174|Actinobacteria 201174|Actinobacteria MU ig-like, plexins, transcription factors - - - - - - - - - - - - B_lectin,CHAP,TIG WXD2_k127_4664774_0 1101188.KI912155_gene2458 4.076e-215 677.0 COG0499@1|root,COG0499@2|Bacteria,2GK2Q@201174|Actinobacteria,1W7GS@1268|Micrococcaceae 201174|Actinobacteria H May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine ahcY GO:0000096,GO:0000098,GO:0000166,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009066,GO:0009068,GO:0009069,GO:0009087,GO:0009116,GO:0009119,GO:0009987,GO:0016020,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0019899,GO:0022610,GO:0030260,GO:0030312,GO:0033353,GO:0034641,GO:0035375,GO:0035635,GO:0036094,GO:0040007,GO:0042278,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0044403,GO:0044406,GO:0044409,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0044650,GO:0046085,GO:0046128,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0048037,GO:0050662,GO:0051186,GO:0051287,GO:0051701,GO:0051704,GO:0051806,GO:0051828,GO:0055086,GO:0070403,GO:0071704,GO:0071944,GO:0072521,GO:0097159,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1901657 3.3.1.1 ko:K01251 ko00270,ko01100,map00270,map01100 M00035 R00192,R04936 RC00056,RC00069,RC01161,RC01243 ko00000,ko00001,ko00002,ko01000,ko01009,ko04147 - - - AdoHcyase,AdoHcyase_NAD WXD2_k127_4664929_1 1043205.AFYF01000059_gene2533 8.267e-112 382.0 COG1404@1|root,COG1404@2|Bacteria,2GJYH@201174|Actinobacteria,4FF4Q@85021|Intrasporangiaceae 201174|Actinobacteria M Belongs to the peptidase S8 family - - - - - - - - - - - - Inhibitor_I9,Peptidase_S8 WXD2_k127_4664929_0 211586.SO_0341 1.074e-152 531.0 COG2202@1|root,COG3292@1|root,COG5001@1|root,COG2202@2|Bacteria,COG3292@2|Bacteria,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,1RM8A@1236|Gammaproteobacteria,2Q8ZG@267890|Shewanellaceae 1236|Gammaproteobacteria T Two component regulator three Y domain protein - - - - - - - - - - - - EAL,GGDEF,PAS_3,PAS_9,Reg_prop,Y_Y_Y WXD2_k127_4664929_3 345341.KUTG_06260 0.0002024 51.0 2DZGU@1|root,32VA8@2|Bacteria,2IRDJ@201174|Actinobacteria 201174|Actinobacteria - - - - - - - - - - - - - - - WXD2_k127_4664929_2 234267.Acid_7677 3.746e-52 194.0 COG1595@1|root,COG1595@2|Bacteria,3Y7UW@57723|Acidobacteria 57723|Acidobacteria K ECF sigma factor - - - - - - - - - - - - Sigma70_ECF WXD2_k127_4665981_9 234267.Acid_6923 8.151e-21 95.0 COG1740@1|root,COG1740@2|Bacteria,3Y3HS@57723|Acidobacteria 57723|Acidobacteria C NiFe/NiFeSe hydrogenase small subunit C-terminal - - 1.12.99.6 ko:K06282 ko00633,ko01120,map00633,map01120 - R08034 RC00250 ko00000,ko00001,ko01000 - - - NiFe_hyd_SSU_C,Oxidored_q6 WXD2_k127_4665981_5 234267.Acid_6924 2.06e-96 324.0 COG0437@1|root,COG0437@2|Bacteria 2|Bacteria C 4 iron, 4 sulfur cluster binding hybA GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0005975,GO:0006066,GO:0006071,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016052,GO:0019400,GO:0019405,GO:0019563,GO:0019588,GO:0019662,GO:0019751,GO:0031224,GO:0031226,GO:0042597,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0044425,GO:0044459,GO:0044464,GO:0046164,GO:0046174,GO:0055114,GO:0071704,GO:0071944,GO:1901575,GO:1901615,GO:1901616 - ko:K00124 ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200 - R00519 RC02796 ko00000,ko00001 - - - Fer4_11,Fer4_4,Fer4_7,TAT_signal WXD2_k127_4665981_6 204669.Acid345_4239 4.855e-94 323.0 COG5557@1|root,COG5557@2|Bacteria,3Y6AT@57723|Acidobacteria 57723|Acidobacteria C Pfam Polysulphide reductase, NrfD - - - - - - - - - - - - - WXD2_k127_4665981_0 234267.Acid_6926 5.356e-257 802.0 COG0374@1|root,COG0374@2|Bacteria,3Y3C2@57723|Acidobacteria 57723|Acidobacteria C nickel-dependent hydrogenase, large subunit - - 1.12.99.6 ko:K06281 ko00633,ko01120,map00633,map01120 - R08034 RC00250 ko00000,ko00001,ko01000 - - - NiFeSe_Hases WXD2_k127_4665981_7 404589.Anae109_0522 1.044e-37 148.0 COG0680@1|root,COG0680@2|Bacteria,1RE1C@1224|Proteobacteria,42REH@68525|delta/epsilon subdivisions,2WPXK@28221|Deltaproteobacteria 28221|Deltaproteobacteria C PFAM peptidase M52 hydrogen uptake protein hyaP - - ko:K03605 - - - - ko00000,ko01000,ko01002 - - iAF987.Gmet_3329 HycI WXD2_k127_4665981_8 1278073.MYSTI_03143 3.212e-22 100.0 2EAYI@1|root,334ZG@2|Bacteria,1N8W1@1224|Proteobacteria,432ZT@68525|delta/epsilon subdivisions,2WXAQ@28221|Deltaproteobacteria,2Z2VM@29|Myxococcales 28221|Deltaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_4665981_10 414996.IL38_11545 6.17e-14 78.0 COG2110@1|root,COG2110@2|Bacteria,2IFEC@201174|Actinobacteria,40902@622450|Actinopolysporales 201174|Actinobacteria S Appr-1'-p processing enzyme lppD GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - - - - - - - - - - Macro WXD2_k127_4665981_12 1123248.KB893370_gene5153 2.373e-08 60.0 COG1359@1|root,COG1359@2|Bacteria,4P3Z8@976|Bacteroidetes 976|Bacteroidetes S (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - - - - - - - - - - - WXD2_k127_4665981_1 861299.J421_0666 3.578e-163 521.0 COG4447@1|root,COG4447@2|Bacteria,1ZSWZ@142182|Gemmatimonadetes 142182|Gemmatimonadetes S cellulose binding - - - - - - - - - - - - - WXD2_k127_4665981_11 219305.MCAG_04934 1.886e-11 76.0 COG1977@1|root,COG1977@2|Bacteria,2I5HS@201174|Actinobacteria,4DE22@85008|Micromonosporales 201174|Actinobacteria H ThiS family - - - ko:K03636 ko04122,map04122 - - - ko00000,ko00001 - - - ThiS WXD2_k127_4665981_4 1121920.AUAU01000006_gene333 4.171e-98 328.0 COG2897@1|root,COG2897@2|Bacteria,3Y5QK@57723|Acidobacteria 57723|Acidobacteria P Rhodanese Homology Domain - - 2.8.1.1,2.8.1.2 ko:K01011 ko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122 - R01931,R03105,R03106 RC00214 ko00000,ko00001,ko01000 - - - Rhodanese WXD2_k127_4665981_3 62928.azo1539 1.368e-116 384.0 COG1071@1|root,COG1071@2|Bacteria,1MU5R@1224|Proteobacteria,2VIIQ@28216|Betaproteobacteria,2KYDV@206389|Rhodocyclales 206389|Rhodocyclales C Dehydrogenase E1 component - - 1.2.4.1 ko:K00161,ko:K21416 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00307 R00014,R00209,R01699,R03270 RC00004,RC00027,RC00627,RC02742,RC02744,RC02882 br01601,ko00000,ko00001,ko00002,ko01000 - - - E1_dh WXD2_k127_4665981_2 748247.AZKH_4462 5.001e-139 452.0 COG0022@1|root,COG0022@2|Bacteria,1R8KB@1224|Proteobacteria,2VKQ0@28216|Betaproteobacteria,2KXXF@206389|Rhodocyclales 206389|Rhodocyclales C Transketolase, pyrimidine binding domain - - 1.2.4.1 ko:K00162,ko:K21417 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00307 R00014,R00209,R01699,R03270 RC00004,RC00027,RC00627,RC02742,RC02744,RC02882 br01601,ko00000,ko00001,ko00002,ko01000 - - - Transket_pyr,Transketolase_C WXD2_k127_46740_0 1519464.HY22_00710 3.029e-163 524.0 COG0577@1|root,COG0577@2|Bacteria,1FDSK@1090|Chlorobi 1090|Chlorobi V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD WXD2_k127_46740_1 452637.Oter_1637 1.208e-126 421.0 COG0845@1|root,COG0845@2|Bacteria,46SKN@74201|Verrucomicrobia,3K76J@414999|Opitutae 414999|Opitutae M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K02005 - - - - ko00000 - - - HlyD_D23 WXD2_k127_46740_2 913325.N799_01140 8.918e-91 312.0 COG3590@1|root,COG3590@2|Bacteria,1MVNQ@1224|Proteobacteria,1RNNA@1236|Gammaproteobacteria,1X4B6@135614|Xanthomonadales 135614|Xanthomonadales O peptidase - - - ko:K07386 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M13,Peptidase_M13_N WXD2_k127_4674019_0 349521.HCH_01091 1.069e-141 464.0 COG0402@1|root,COG0402@2|Bacteria,1MUPT@1224|Proteobacteria,1SYCI@1236|Gammaproteobacteria,1XHPE@135619|Oceanospirillales 135619|Oceanospirillales F Guanine deaminase - - 3.5.4.3 ko:K01487 ko00230,ko01100,map00230,map01100 - R01676 RC00204 ko00000,ko00001,ko01000 - - - Amidohydro_1 WXD2_k127_4674019_3 644966.Tmar_0130 3.491e-47 182.0 COG3298@1|root,COG3298@2|Bacteria 2|Bacteria L Predicted 3'-5' exonuclease related to the exonuclease domain of PolB wlaX - - ko:K07501 - - - - ko00000 - - - DNA_pol_B_exo2 WXD2_k127_4674019_2 1183438.GKIL_3263 6.115e-108 383.0 COG1470@1|root,COG3391@1|root,COG1470@2|Bacteria,COG3391@2|Bacteria,1G0EB@1117|Cyanobacteria 1117|Cyanobacteria DZ PFAM Na-Ca exchanger integrin-beta4 peptidase-like FG-GAP - - - ko:K20276 ko02024,map02024 - - - ko00000,ko00001 - - - Calx-beta,DUF4347,He_PIG,HemolysinCabind,PPC,VCBS WXD2_k127_4674019_1 439235.Dalk_0818 1.124e-117 383.0 COG0039@1|root,COG0039@2|Bacteria,1MV57@1224|Proteobacteria,42KZJ@68525|delta/epsilon subdivisions,2WJ4U@28221|Deltaproteobacteria,2MJ7T@213118|Desulfobacterales 28221|Deltaproteobacteria C Catalyzes the reversible oxidation of malate to oxaloacetate mdh - 1.1.1.37 ko:K00024 ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00012,M00168,M00173,M00346,M00374,M00620,M00740 R00342,R07136 RC00031 ko00000,ko00001,ko00002,ko01000 - - - Ldh_1_C,Ldh_1_N WXD2_k127_4691628_4 215803.DB30_5292 1.389e-12 76.0 COG3055@1|root,COG3291@1|root,COG3055@2|Bacteria,COG3291@2|Bacteria 2|Bacteria S metallopeptidase activity - - - ko:K14645 ko02024,map02024 - - - ko00000,ko00001,ko01000,ko01002,ko03110 - - - Big_3_3,He_PIG,Kelch_1,Kelch_4,PKD,PPC,Pro-kuma_activ WXD2_k127_4691628_5 1521187.JPIM01000007_gene1370 5.024e-07 59.0 COG1716@1|root,COG1716@2|Bacteria,2G9KV@200795|Chloroflexi,376M0@32061|Chloroflexia 32061|Chloroflexia T PFAM Forkhead-associated protein - - - - - - - - - - - - FHA,Peptidase_C11 WXD2_k127_4691628_3 1267534.KB906754_gene3175 2.272e-16 93.0 COG2304@1|root,COG2304@2|Bacteria,3Y3DR@57723|Acidobacteria,2JHJT@204432|Acidobacteriia 204432|Acidobacteriia S TIGRFAM VWFA-related Acidobacterial domain - - - - - - - - - - - - - WXD2_k127_4691628_0 56780.SYN_00169 1.033e-69 251.0 COG0253@1|root,COG0253@2|Bacteria,1MWDH@1224|Proteobacteria,42MRX@68525|delta/epsilon subdivisions,2WMP4@28221|Deltaproteobacteria,2MQD5@213462|Syntrophobacterales 28221|Deltaproteobacteria E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan dapF - 5.1.1.7 ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00527 R02735 RC00302 ko00000,ko00001,ko00002,ko01000 - - - DAP_epimerase WXD2_k127_4691628_2 1499967.BAYZ01000017_gene6258 2.184e-22 114.0 2DTK7@1|root,33KQU@2|Bacteria,2NRAS@2323|unclassified Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_4691628_1 1193181.BN10_520057 1.301e-23 110.0 COG1216@1|root,COG1216@2|Bacteria,2GK2D@201174|Actinobacteria,4FHZD@85021|Intrasporangiaceae 201174|Actinobacteria S Glycosyltransferase like family 2 - - - ko:K07011 - - - - ko00000 - - - Glyco_tranf_2_3,Glyco_trans_2_3,Glycos_transf_2 WXD2_k127_4691628_6 867845.KI911784_gene1963 8.862e-07 55.0 COG0438@1|root,COG0438@2|Bacteria,2G762@200795|Chloroflexi,37649@32061|Chloroflexia 32061|Chloroflexia M Glycosyl transferases group 1 - - - - - - - - - - - - Glyco_trans_1_4 WXD2_k127_4692601_4 109871.XP_006682654.1 2.469e-74 287.0 28KWS@1|root,2QTDC@2759|Eukaryota,38HTE@33154|Opisthokonta,3NUPR@4751|Fungi 4751|Fungi O Belongs to the peptidase M36 family MEP GO:0005575,GO:0005576 - ko:K01417 - - - - ko00000,ko01000,ko01002 - - - FTP,Peptidase_M36 WXD2_k127_4692601_6 204669.Acid345_2815 1.847e-53 193.0 COG1225@1|root,COG1225@2|Bacteria,3Y4W0@57723|Acidobacteria,2JJ7A@204432|Acidobacteriia 204432|Acidobacteriia O Redoxin - - 1.11.1.15 ko:K03564 - - - - ko00000,ko01000 - - - AhpC-TSA WXD2_k127_4692601_5 861299.J421_6133 3.093e-66 237.0 COG0189@1|root,COG0189@2|Bacteria 2|Bacteria HJ Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) dcsG - 6.3.5.5 ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - - GSH-S_ATP,RimK WXD2_k127_4692601_1 247490.KSU1_C0701 4.071e-115 385.0 COG0577@1|root,COG0577@2|Bacteria,2IY2P@203682|Planctomycetes 203682|Planctomycetes V membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides macB - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran,FtsX,MacB_PCD WXD2_k127_4692601_3 1242864.D187_001641 3.068e-86 293.0 COG1136@1|root,COG1136@2|Bacteria,1MU45@1224|Proteobacteria,42P96@68525|delta/epsilon subdivisions,2WMVB@28221|Deltaproteobacteria,2YUCK@29|Myxococcales 28221|Deltaproteobacteria P Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran WXD2_k127_4692601_2 443143.GM18_2043 4.512e-94 324.0 COG0845@1|root,COG0845@2|Bacteria,1MU8D@1224|Proteobacteria,42NVA@68525|delta/epsilon subdivisions,2WMQK@28221|Deltaproteobacteria 28221|Deltaproteobacteria M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K02005 - - - - ko00000 - - - HlyD_D23 WXD2_k127_4692601_7 1499967.BAYZ01000158_gene436 5.495e-24 108.0 COG1664@1|root,COG1664@2|Bacteria,2NQ1N@2323|unclassified Bacteria 2|Bacteria M Polymer-forming cytoskeletal - - - - - - - - - - - - Bactofilin WXD2_k127_4692601_0 1379698.RBG1_1C00001G0471 4.432e-216 685.0 COG1012@1|root,COG1012@2|Bacteria,2NNR8@2323|unclassified Bacteria 2|Bacteria C Belongs to the aldehyde dehydrogenase family ycbD - 1.2.1.3 ko:K00128,ko:K22187 ko00010,ko00040,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00040,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130 M00135 R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146,R11768 RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500 ko00000,ko00001,ko00002,ko01000 - - - Aldedh WXD2_k127_4696028_1 1396141.BATP01000003_gene5228 3.874e-118 391.0 COG0451@1|root,COG0451@2|Bacteria,46XPQ@74201|Verrucomicrobia,2IWC3@203494|Verrucomicrobiae 203494|Verrucomicrobiae GM ADP-glyceromanno-heptose 6-epimerase activity - - - - - - - - - - - - - WXD2_k127_4696028_3 1519464.HY22_02720 1.384e-50 190.0 COG0546@1|root,COG0546@2|Bacteria,1FDVN@1090|Chlorobi 1090|Chlorobi S PFAM Haloacid dehalogenase domain protein hydrolase - - - - - - - - - - - - HAD_2 WXD2_k127_4696028_4 1123073.KB899245_gene139 5.676e-26 121.0 COG3595@1|root,COG3595@2|Bacteria,1RI1P@1224|Proteobacteria,1RRZW@1236|Gammaproteobacteria,1X68A@135614|Xanthomonadales 135614|Xanthomonadales - - - - - - - - - - - - - - DUF4097 WXD2_k127_4696028_2 204669.Acid345_2601 8.394e-91 306.0 COG0437@1|root,COG0437@2|Bacteria,3Y5RE@57723|Acidobacteria,2JKSV@204432|Acidobacteriia 204432|Acidobacteriia C 4Fe-4S dicluster domain - - - - - - - - - - - - DmsC,Fer4_11 WXD2_k127_4696028_0 234267.Acid_4205 4.466e-124 408.0 COG5557@1|root,COG5557@2|Bacteria,3Y3RF@57723|Acidobacteria 57723|Acidobacteria C Polysulphide reductase, NrfD - - - - - - - - - - - - NrfD WXD2_k127_4696028_5 204669.Acid345_2603 6.372e-23 102.0 COG4191@1|root,COG4191@2|Bacteria,3Y42C@57723|Acidobacteria,2JP3M@204432|Acidobacteriia 57723|Acidobacteria T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HAMP,HATPase_c,HisKA WXD2_k127_4700657_0 264462.Bd2174 0.0 1017.0 COG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,42PMK@68525|delta/epsilon subdivisions,2MTS8@213481|Bdellovibrionales,2WTI2@28221|Deltaproteobacteria 213481|Bdellovibrionales I Domain of unknown function (DUF1974) - - - ko:K06445 ko00071,ko01100,ko01212,map00071,map01100,map01212 M00087 R01175,R01279,R03777,R03857,R03990,R04751,R04754 RC00052,RC00076 ko00000,ko00001,ko00002,ko01000 - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N,DUF1974 WXD2_k127_4700657_1 1519464.HY22_10730 1.226e-113 380.0 COG2271@1|root,COG2271@2|Bacteria 2|Bacteria G transmembrane transporter activity - - - - - - - - - - - - MFS_1 WXD2_k127_470077_0 1279009.ADICEAN_00512 4.903e-229 723.0 COG0308@1|root,COG0308@2|Bacteria,4NFT0@976|Bacteroidetes,47M3W@768503|Cytophagia 976|Bacteroidetes E Leukotriene A4 hydrolase, C-terminal - - - - - - - - - - - - Leuk-A4-hydro_C,Peptidase_M1 WXD2_k127_470077_1 234267.Acid_3259 1.855e-169 539.0 COG1297@1|root,COG1297@2|Bacteria,3Y3SD@57723|Acidobacteria 57723|Acidobacteria S OPT oligopeptide transporter protein - - - - - - - - - - - - OPT WXD2_k127_4707043_0 983917.RGE_32210 2.085e-19 102.0 COG2885@1|root,COG2885@2|Bacteria,1PH1G@1224|Proteobacteria,2W308@28216|Betaproteobacteria 28216|Betaproteobacteria M OmpA family - - - ko:K03286 - - - - ko00000,ko02000 1.B.6 - - OmpA WXD2_k127_4708552_3 880071.Fleli_1922 7.26e-06 56.0 COG0535@1|root,COG0535@2|Bacteria,4NGWY@976|Bacteroidetes,47K59@768503|Cytophagia 976|Bacteroidetes C Radical SAM - - - - - - - - - - - - Fer4_12,Radical_SAM,SPASM WXD2_k127_4708552_2 290397.Adeh_4303 6.738e-37 149.0 COG0451@1|root,COG0451@2|Bacteria,1MWYB@1224|Proteobacteria,43DY0@68525|delta/epsilon subdivisions,2X918@28221|Deltaproteobacteria,2Z1ER@29|Myxococcales 28221|Deltaproteobacteria GM NmrA-like family - - - - - - - - - - - - Epimerase WXD2_k127_4708552_1 1382356.JQMP01000004_gene323 8.771e-86 295.0 COG3804@1|root,COG3804@2|Bacteria,2GA3D@200795|Chloroflexi,27YZV@189775|Thermomicrobia 189775|Thermomicrobia S Dihydrodipicolinate reductase, N-terminus - - 1.4.1.12,1.4.1.26 ko:K21672 ko00310,ko00330,ko00472,map00310,map00330,map00472 - R02825,R04200,R04201,R04687,R04688 RC00249,RC00790 ko00000,ko00001,ko01000 - - - DapB_N WXD2_k127_4708552_0 682795.AciX8_3235 4.639e-129 426.0 COG0389@1|root,COG0389@2|Bacteria,3Y3NY@57723|Acidobacteria,2JIP4@204432|Acidobacteriia 204432|Acidobacteriia L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII dinB - 2.7.7.7 ko:K02346 - - - - ko00000,ko01000,ko03400 - - - IMS,IMS_C,IMS_HHH WXD2_k127_47274_1 1121877.JQKF01000003_gene1502 1.951e-64 229.0 COG0412@1|root,COG0412@2|Bacteria,2GNWB@201174|Actinobacteria,4CN01@84992|Acidimicrobiia 84992|Acidimicrobiia Q Dienelactone hydrolase family - - 3.1.1.45 ko:K01061 ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130 - R03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222 RC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686 ko00000,ko00001,ko01000 - - - DLH WXD2_k127_47274_0 1121957.ATVL01000001_gene3549 1.601e-101 342.0 COG2855@1|root,COG2855@2|Bacteria,4NES6@976|Bacteroidetes,47PE4@768503|Cytophagia 976|Bacteroidetes S Conserved hypothetical protein 698 - - - - - - - - - - - - Cons_hypoth698 WXD2_k127_47274_2 926569.ANT_06790 1.249e-25 120.0 COG0457@1|root,COG0457@2|Bacteria,2G770@200795|Chloroflexi 200795|Chloroflexi S Domain of unknown function (DUF4388) - - - - - - - - - - - - DUF4388 WXD2_k127_47274_3 86416.Clopa_3587 3.621e-11 75.0 COG1716@1|root,COG1716@2|Bacteria,1VF0E@1239|Firmicutes,24P12@186801|Clostridia,36KT8@31979|Clostridiaceae 186801|Clostridia T FHA domain - - - - - - - - - - - - FHA WXD2_k127_47274_4 69328.PVLB_13710 6.749e-07 59.0 COG1846@1|root,COG1846@2|Bacteria,1N7BV@1224|Proteobacteria,1S2AX@1236|Gammaproteobacteria 1236|Gammaproteobacteria K transcriptional regulator marR GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0042221,GO:0044212,GO:0045892,GO:0045934,GO:0046677,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0070887,GO:0071236,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - ko:K03712 - - - - ko00000,ko03000 - - - MarR,MarR_2 WXD2_k127_4740681_3 1147.D082_21650 2.118e-09 62.0 COG0438@1|root,COG0438@2|Bacteria 2|Bacteria M transferase activity, transferring glycosyl groups - - - - - - - - - - - - Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1 WXD2_k127_4740681_2 234267.Acid_0028 1.839e-26 124.0 COG3012@1|root,COG3012@2|Bacteria 2|Bacteria - - - - - ko:K07039 - - - - ko00000 - - - DUF1186,PRiA4_ORF3,SEC-C WXD2_k127_4740681_0 861299.J421_2267 1.439e-72 273.0 COG0515@1|root,COG0515@2|Bacteria,1ZUBQ@142182|Gemmatimonadetes 142182|Gemmatimonadetes KLT Protein kinase domain - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase WXD2_k127_4740681_1 1123242.JH636435_gene2613 1.398e-29 123.0 COG1595@1|root,COG1595@2|Bacteria,2IZZP@203682|Planctomycetes 203682|Planctomycetes K Sigma-70 region 2 - - - - - - - - - - - - Sigma70_r2 WXD2_k127_4747331_0 1121920.AUAU01000009_gene1881 3.724e-20 107.0 COG1520@1|root,COG1520@2|Bacteria 2|Bacteria S amino acid activation for nonribosomal peptide biosynthetic process - - - - - - - - - - - - He_PIG,I-set,Ig_3,PKD,Peptidase_S8 WXD2_k127_4752441_0 292415.Tbd_2258 9.766e-143 462.0 COG0673@1|root,COG0673@2|Bacteria,1PF0E@1224|Proteobacteria,2W9B2@28216|Betaproteobacteria,1KTHN@119069|Hydrogenophilales 119069|Hydrogenophilales S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA WXD2_k127_4752441_6 589865.DaAHT2_2629 9.278e-13 81.0 COG4118@1|root,COG4118@2|Bacteria,1P735@1224|Proteobacteria 2|Bacteria D positive regulation of growth - - - - - - - - - - - - PhdYeFM_antitox WXD2_k127_4752441_3 1458427.BAWN01000019_gene1192 1.391e-42 163.0 COG3744@1|root,COG3744@2|Bacteria 2|Bacteria S ribonuclease activity - - - - - - - - - - - - PIN WXD2_k127_4752441_1 420324.KI912082_gene6987 3.556e-90 300.0 COG0431@1|root,COG0431@2|Bacteria,1RAFI@1224|Proteobacteria,2TUBI@28211|Alphaproteobacteria 28211|Alphaproteobacteria S NAD(P)H-dependent FMN reductase - - - ko:K19784 - - - - ko00000 - - - FMN_red WXD2_k127_4752441_2 1121396.KB893074_gene3027 3.446e-45 171.0 COG2755@1|root,COG2755@2|Bacteria,1RCXZ@1224|Proteobacteria,42TZW@68525|delta/epsilon subdivisions,2WNUV@28221|Deltaproteobacteria,2MMRU@213118|Desulfobacterales 28221|Deltaproteobacteria E GDSL-like Lipase/Acylhydrolase family - - 3.1.1.5 ko:K10804 ko01040,map01040 - - - ko00000,ko00001,ko01000,ko01004 - - - Lipase_GDSL_2 WXD2_k127_4752441_4 596323.HMPREF0554_0751 7.169e-33 134.0 COG5403@1|root,COG5403@2|Bacteria,37B87@32066|Fusobacteria 32066|Fusobacteria S Bacterial protein of unknown function (DUF937) - - - - - - - - - - - - DUF937 WXD2_k127_4752441_5 1121352.JHZP01000004_gene1501 1.416e-16 85.0 COG1652@1|root,COG1652@2|Bacteria,1RD8K@1224|Proteobacteria,2VR7C@28216|Betaproteobacteria,2KR8C@206351|Neisseriales 206351|Neisseriales S BON domain - - - - - - - - - - - - BON,LysM WXD2_k127_4772788_4 215803.DB30_1345 2.051e-156 504.0 COG2301@1|root,COG2301@2|Bacteria,1R7U2@1224|Proteobacteria,437FH@68525|delta/epsilon subdivisions,2X2N4@28221|Deltaproteobacteria,2YTXN@29|Myxococcales 28221|Deltaproteobacteria G Belongs to the HpcH HpaI aldolase family - - - - - - - - - - - - HpcH_HpaI WXD2_k127_4772788_8 1122612.AUBA01000002_gene1883 2.809e-71 252.0 COG3748@1|root,COG3748@2|Bacteria,1MWHB@1224|Proteobacteria,2TSXN@28211|Alphaproteobacteria 28211|Alphaproteobacteria S membrane MA20_17625 - - - - - - - - - - - Urate_ox_N WXD2_k127_4772788_2 862908.BMS_2856 1.139e-240 768.0 COG4631@1|root,COG4631@2|Bacteria,1NQSR@1224|Proteobacteria,43C3C@68525|delta/epsilon subdivisions,2MTI8@213481|Bdellovibrionales,2X7DZ@28221|Deltaproteobacteria 213481|Bdellovibrionales C Xanthine dehydrogenase xdhB - 1.17.1.4 ko:K13482 ko00230,ko01100,ko01120,map00230,map01100,map01120 M00546 R01768,R02103 RC00143 ko00000,ko00001,ko00002,ko01000 - - - Ald_Xan_dh_C,Ald_Xan_dh_C2,CO_deh_flav_C,FAD_binding_5,Fer2,Fer2_2 WXD2_k127_4772788_6 862908.BMS_2857 1.709e-121 405.0 COG4630@1|root,COG4630@2|Bacteria,1MWI1@1224|Proteobacteria,43E4Q@68525|delta/epsilon subdivisions,2MTP3@213481|Bdellovibrionales,2X7E4@28221|Deltaproteobacteria 213481|Bdellovibrionales C CO dehydrogenase flavoprotein C-terminal domain xdhA - 1.17.1.4 ko:K13481 ko00230,ko01100,ko01120,map00230,map01100,map01120 M00546 R01768,R02103 RC00143 ko00000,ko00001,ko00002,ko01000 - - - CO_deh_flav_C,FAD_binding_5,Fer2,Fer2_2 WXD2_k127_4772788_9 13035.Dacsa_3406 3.099e-48 177.0 COG1047@1|root,COG1047@2|Bacteria,1G5R4@1117|Cyanobacteria 1117|Cyanobacteria O PFAM FKBP-type peptidyl-prolyl cis-trans isomerase - - 5.2.1.8 ko:K01802 - - - - ko00000,ko01000 - - - FKBP_C WXD2_k127_4772788_13 671143.DAMO_0140 1.154e-25 107.0 COG1278@1|root,COG1278@2|Bacteria,2NPXP@2323|unclassified Bacteria 2|Bacteria K 'Cold-shock' DNA-binding domain cspA - - ko:K03704 - - - - ko00000,ko03000 - - - CSD WXD2_k127_4772788_10 56107.Cylst_4460 1.457e-35 141.0 COG0454@1|root,COG0456@2|Bacteria,1G7IH@1117|Cyanobacteria,1HSAZ@1161|Nostocales 1117|Cyanobacteria K Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_1 WXD2_k127_4772788_0 326427.Cagg_2090 0.0 1353.0 COG0366@1|root,COG3281@1|root,COG0366@2|Bacteria,COG3281@2|Bacteria,2G86T@200795|Chloroflexi,377XJ@32061|Chloroflexia 32061|Chloroflexia G SMART alpha amylase, catalytic sub domain - - 3.2.1.1,5.4.99.16 ko:K05343 ko00500,ko01100,map00500,map01100 - R01557,R02108,R02112,R11262 RC01816 ko00000,ko00001,ko01000 - GH13 - Alpha-amylase,Malt_amylase_C WXD2_k127_4772788_1 452637.Oter_1105 3.366e-252 799.0 COG0366@1|root,COG0366@2|Bacteria,46S7A@74201|Verrucomicrobia 74201|Verrucomicrobia G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB glgE - 2.4.99.16 ko:K16147 ko00500,ko01100,map00500,map01100 - R09994 - ko00000,ko00001,ko01000 - GH13 - Alpha-amylase,DUF3416 WXD2_k127_4772788_17 439235.Dalk_1453 1.124e-13 85.0 COG1807@1|root,COG1807@2|Bacteria 2|Bacteria M 4-amino-4-deoxy-L-arabinose transferase activity - - - - - - - - - - - - PMT_2 WXD2_k127_4772788_16 1232410.KI421416_gene2592 8.313e-18 88.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2WIT0@28221|Deltaproteobacteria,43UCF@69541|Desulfuromonadales 28221|Deltaproteobacteria T response regulator pilR - - ko:K02667 ko02020,map02020 M00501 - - ko00000,ko00001,ko00002,ko02022,ko02035 - - - HTH_8,Response_reg,Sigma54_activat WXD2_k127_4772788_12 639030.JHVA01000001_gene547 5.412e-32 137.0 COG4276@1|root,COG4276@2|Bacteria,3Y57N@57723|Acidobacteria,2JNAU@204432|Acidobacteriia 204432|Acidobacteriia S Pfam Polyketide cyclase dehydrase and lipid transport - - - - - - - - - - - - - WXD2_k127_4772788_15 1500897.JQNA01000002_gene4968 3.012e-19 99.0 COG4539@1|root,COG4539@2|Bacteria,1RHUB@1224|Proteobacteria,2VTDF@28216|Betaproteobacteria,1K4TZ@119060|Burkholderiaceae 28216|Betaproteobacteria S Protein of unknown function (DUF962) - - - - - - - - - - - - DUF962 WXD2_k127_4772788_3 1128421.JAGA01000002_gene335 2.108e-159 514.0 COG2124@1|root,COG2124@2|Bacteria 2|Bacteria Q cytochrome p450 - - - - - - - - - - - - p450 WXD2_k127_4772788_5 234267.Acid_3577 4.979e-147 486.0 COG0249@1|root,COG0249@2|Bacteria,3Y48T@57723|Acidobacteria 57723|Acidobacteria L ATPase domain of DNA mismatch repair MUTS family - - - - - - - - - - - - MutS_III,MutS_V WXD2_k127_4772788_14 760568.Desku_1923 9.421e-22 101.0 COG1438@1|root,COG1438@2|Bacteria,1V1R7@1239|Firmicutes,24HGQ@186801|Clostridia,2625T@186807|Peptococcaceae 186801|Clostridia K Regulates arginine biosynthesis genes argR - - ko:K03402 - - - - ko00000,ko03000 - - - Arg_repressor,Arg_repressor_C WXD2_k127_4772788_7 234267.Acid_0723 6.165e-86 295.0 COG0002@1|root,COG0002@2|Bacteria,3Y450@57723|Acidobacteria 57723|Acidobacteria E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde argC - 1.2.1.38 ko:K00145 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028,M00845 R03443 RC00684 ko00000,ko00001,ko00002,ko01000 - - - Semialdhyde_dh,Semialdhyde_dhC WXD2_k127_4772788_11 663278.Ethha_0146 4.595e-34 147.0 COG0548@1|root,COG0548@2|Bacteria,1TP0N@1239|Firmicutes,2486J@186801|Clostridia,3WGF0@541000|Ruminococcaceae 186801|Clostridia E Belongs to the acetylglutamate kinase family. ArgB subfamily argB - 2.7.2.8 ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028 R02649 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 - - iHN637.CLJU_RS10565 AA_kinase WXD2_k127_4778144_5 1149133.ppKF707_1769 1.335e-11 64.0 COG0451@1|root,COG0451@2|Bacteria,1MU7J@1224|Proteobacteria,1RPTA@1236|Gammaproteobacteria 1236|Gammaproteobacteria M epimerase dehydratase - - 5.1.3.25,5.1.3.6 ko:K08679,ko:K17947 ko00520,ko00523,ko01100,ko01130,map00520,map00523,map01100,map01130 - R01385,R10279 RC00289 ko00000,ko00001,ko01000 - - - Epimerase,GDP_Man_Dehyd WXD2_k127_4778144_2 1300345.LF41_2983 7.899e-112 384.0 COG2730@1|root,COG2730@2|Bacteria 2|Bacteria G polysaccharide catabolic process - - 3.2.1.4 ko:K01179 ko00500,ko01100,map00500,map01100 - R06200,R11307,R11308 - ko00000,ko00001,ko01000 - GH5,GH9 - Calx-beta,Cellulase,NHL,RicinB_lectin_2 WXD2_k127_4778144_6 1297742.A176_03834 6.468e-09 70.0 COG0726@1|root,COG0726@2|Bacteria 2|Bacteria G polysaccharide deacetylase - - - - - - - - - - - - Polysacc_deac_1 WXD2_k127_4778144_4 240292.Ava_C0139 3.064e-61 218.0 COG2823@1|root,COG2823@2|Bacteria,1GBV7@1117|Cyanobacteria,1HPUI@1161|Nostocales 1117|Cyanobacteria S bacterial OsmY and nodulation domain - - - - - - - - - - - - BON WXD2_k127_4778144_1 1123508.JH636439_gene1738 4.337e-170 544.0 COG2252@1|root,COG2252@2|Bacteria 2|Bacteria S purine nucleobase transmembrane transporter activity yicO - - ko:K06901 - - - - ko00000,ko02000 2.A.1.40 - - Xan_ur_permease WXD2_k127_4778144_0 1254432.SCE1572_07155 2.57e-178 570.0 COG1233@1|root,COG1233@2|Bacteria,1MV2R@1224|Proteobacteria,42Y0Z@68525|delta/epsilon subdivisions,2WT7J@28221|Deltaproteobacteria,2YWBV@29|Myxococcales 28221|Deltaproteobacteria Q Flavin containing amine oxidoreductase - - - - - - - - - - - - Amino_oxidase,NAD_binding_8 WXD2_k127_4786792_1 107636.JQNK01000008_gene3913 7.308e-20 96.0 COG0835@1|root,COG0835@2|Bacteria,1RD1W@1224|Proteobacteria,2U7P9@28211|Alphaproteobacteria,36YPC@31993|Methylocystaceae 28211|Alphaproteobacteria NT Two component signalling adaptor domain cheW1 - - ko:K03408 ko02020,ko02030,map02020,map02030 - - - ko00000,ko00001,ko02035 - - - CheW WXD2_k127_4786792_0 290397.Adeh_0058 1.223e-92 330.0 COG0840@1|root,COG3850@1|root,COG0840@2|Bacteria,COG3850@2|Bacteria,1RG2B@1224|Proteobacteria,42RYX@68525|delta/epsilon subdivisions,2WNHC@28221|Deltaproteobacteria,2YU4H@29|Myxococcales 28221|Deltaproteobacteria NT Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). rppA - - ko:K03406 ko02020,ko02030,map02020,map02030 - - - ko00000,ko00001,ko02035 - - - HAMP,MCPsignal WXD2_k127_4786792_2 498211.CJA_0444 8.508e-14 82.0 COG1716@1|root,COG1716@2|Bacteria,1RAA4@1224|Proteobacteria,1S27A@1236|Gammaproteobacteria,1FG4Y@10|Cellvibrio 1236|Gammaproteobacteria T Forkhead associated domain - - - - - - - - - - - - FHA WXD2_k127_478707_2 1267535.KB906767_gene784 9.625e-26 113.0 COG1595@1|root,COG1595@2|Bacteria 2|Bacteria K DNA-templated transcription, initiation - - - - - - - - - - - - Sigma70_r2,Sigma70_r4_2 WXD2_k127_478707_1 404589.Anae109_0474 5.302e-77 265.0 COG4106@1|root,COG4106@2|Bacteria,1Q2Y3@1224|Proteobacteria,43A9Z@68525|delta/epsilon subdivisions,2X37W@28221|Deltaproteobacteria,2YV2G@29|Myxococcales 28221|Deltaproteobacteria S Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate tam - 2.1.1.144 ko:K00598 - - - - ko00000,ko01000 - - - Methyltransf_23,Methyltransf_25 WXD2_k127_478707_0 234267.Acid_3931 1.446e-102 350.0 COG2866@1|root,COG2866@2|Bacteria,3Y3X8@57723|Acidobacteria 57723|Acidobacteria E Peptidase M14, carboxypeptidase A - - - - - - - - - - - - Peptidase_M14 WXD2_k127_4792426_1 1165096.ARWF01000001_gene758 2.362e-139 453.0 COG0058@1|root,COG0058@2|Bacteria,1MW4J@1224|Proteobacteria,2VJIJ@28216|Betaproteobacteria,2KKJ1@206350|Nitrosomonadales 206350|Nitrosomonadales G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties - - 2.4.1.1 ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 - R02111 - ko00000,ko00001,ko01000 - GT35 - Phosphorylase WXD2_k127_4792426_3 1232410.KI421412_gene116 1.573e-89 308.0 COG0008@1|root,COG0008@2|Bacteria,1MUN7@1224|Proteobacteria,42NZP@68525|delta/epsilon subdivisions,2WKZA@28221|Deltaproteobacteria,43S59@69541|Desulfuromonadales 28221|Deltaproteobacteria J Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon gluQ - 6.1.1.17 ko:K01885,ko:K01894 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 M00121,M00359,M00360 R05578 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 - - - tRNA-synt_1c WXD2_k127_4792426_6 762376.AXYL_04828 2.097e-22 99.0 COG2388@1|root,COG2388@2|Bacteria,1N8AQ@1224|Proteobacteria,2VW02@28216|Betaproteobacteria,3T4TK@506|Alcaligenaceae 28216|Betaproteobacteria S Acetyltransferase - - - ko:K06975 - - - - ko00000 - - - Acetyltransf_CG WXD2_k127_4792426_0 671143.DAMO_0012 1.756e-213 677.0 COG1966@1|root,COG1966@2|Bacteria,2NNP2@2323|unclassified Bacteria 2|Bacteria T 5TM C-terminal transporter carbon starvation CstA cstA - - ko:K06200 - - - - ko00000 - - - CstA,CstA_5TM WXD2_k127_4792426_4 1121939.L861_10155 2.542e-51 190.0 COG3963@1|root,COG3963@2|Bacteria,1RATY@1224|Proteobacteria,1S1YM@1236|Gammaproteobacteria 1236|Gammaproteobacteria I methyltransferase ksgA1 - - - - - - - - - - - Methyltransf_25,RrnaAD WXD2_k127_4792426_5 861299.J421_2064 1.13e-31 128.0 COG5531@1|root,COG5531@2|Bacteria,1ZTZP@142182|Gemmatimonadetes 142182|Gemmatimonadetes B SWI complex, BAF60b domains - - - - - - - - - - - - SWIB WXD2_k127_4792426_2 1382306.JNIM01000001_gene1247 1.307e-89 301.0 COG0498@1|root,COG0498@2|Bacteria,2G66Y@200795|Chloroflexi 200795|Chloroflexi E Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine thrC - 4.2.3.1 ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 M00018 R01466,R05086 RC00017,RC00526 ko00000,ko00001,ko00002,ko01000 - - - PALP WXD2_k127_4798866_1 1121017.AUFG01000020_gene2303 8.768e-29 118.0 COG5483@1|root,COG5483@2|Bacteria,2IHSH@201174|Actinobacteria,4FHP6@85021|Intrasporangiaceae 201174|Actinobacteria S Protein of unknown function, DUF488 - - - - - - - - - - - - DUF488 WXD2_k127_4798866_2 1280947.HY30_00545 1.482e-14 85.0 COG3239@1|root,COG3239@2|Bacteria,1MUHK@1224|Proteobacteria,2TSTR@28211|Alphaproteobacteria,43XDH@69657|Hyphomonadaceae 28211|Alphaproteobacteria I fatty acid desaturase MA20_28095 - - - - - - - - - - - FA_desaturase WXD2_k127_4798866_0 518766.Rmar_2194 4.774e-158 513.0 COG0160@1|root,COG0160@2|Bacteria,4NGPB@976|Bacteroidetes,1FITF@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family lat - 2.6.1.36 ko:K03918 ko01100,map01100 - R00457 RC00006,RC00062 ko00000,ko01000,ko01007 - - - Aminotran_3 WXD2_k127_4826831_9 1232410.KI421418_gene2109 0.0003454 54.0 COG0457@1|root,COG0457@2|Bacteria,1QXNU@1224|Proteobacteria,43C4R@68525|delta/epsilon subdivisions,2X7F5@28221|Deltaproteobacteria,43SFM@69541|Desulfuromonadales 28221|Deltaproteobacteria S Peptidase MA superfamily - - - - - - - - - - - - Peptidase_MA_2,TPR_16,TPR_2,TPR_8 WXD2_k127_4826831_8 1121373.KB903662_gene203 7.424e-06 58.0 2AZX3@1|root,31S6U@2|Bacteria,4NQEW@976|Bacteroidetes,47SVP@768503|Cytophagia 976|Bacteroidetes S Domain of unknown function (DUF4328) - - - - - - - - - - - - DUF4328 WXD2_k127_4826831_4 69395.JQLZ01000006_gene2064 1.752e-37 145.0 2C8DW@1|root,32RKY@2|Bacteria,1MZUD@1224|Proteobacteria,2UCNB@28211|Alphaproteobacteria,2KGYQ@204458|Caulobacterales 204458|Caulobacterales S Domain of unknown function (DUF3597) - - - - - - - - - - - - DUF3597 WXD2_k127_4826831_1 1047013.AQSP01000142_gene193 1.16e-107 364.0 COG0534@1|root,COG0534@2|Bacteria,2NPFE@2323|unclassified Bacteria 2|Bacteria V Mate efflux family protein - - - - - - - - - - - - ANKH,MatE WXD2_k127_4826831_3 1267535.KB906767_gene1129 6.443e-60 222.0 COG0515@1|root,COG0515@2|Bacteria,3Y4IC@57723|Acidobacteria,2JJ7M@204432|Acidobacteriia 204432|Acidobacteriia KLT Protein kinase domain - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase WXD2_k127_4826831_7 204669.Acid345_2714 9.955e-13 72.0 COG2010@1|root,COG2010@2|Bacteria,3Y5MU@57723|Acidobacteria,2JJWK@204432|Acidobacteriia 204432|Acidobacteriia C Cytochrome C oxidase, cbb3-type, subunit III - - - - - - - - - - - - Cytochrome_CBB3 WXD2_k127_4826831_6 671143.DAMO_0820 4.021e-33 134.0 COG0723@1|root,COG0723@2|Bacteria,2NQ46@2323|unclassified Bacteria 2|Bacteria C Rieske [2Fe-2S] domain petA - 1.10.2.2,1.10.9.1 ko:K00411,ko:K02636,ko:K03886 ko00190,ko00195,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map00195,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016 M00151,M00152,M00162 R03817,R08409 RC01002 ko00000,ko00001,ko00002,ko00194,ko01000 - - iAF987.Gmet_1922 CytB6-F_Fe-S,Rieske,UCR_Fe-S_N WXD2_k127_4826831_0 1379698.RBG1_1C00001G0780 3.476e-119 417.0 COG1290@1|root,COG1290@2|Bacteria,2NP8C@2323|unclassified Bacteria 2|Bacteria C Cytochrome b(N-terminal)/b6/petB petB - - ko:K00410,ko:K00412,ko:K02635,ko:K02637 ko00190,ko00195,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map00195,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016 M00151,M00152,M00162 - - ko00000,ko00001,ko00002,ko00194,ko03029 - - - Cytochrom_B_C,Cytochrom_C1,Cytochrome_B WXD2_k127_4826831_5 1163408.UU9_06464 2.474e-37 147.0 COG5592@1|root,COG5592@2|Bacteria,1ND3D@1224|Proteobacteria,1SJGE@1236|Gammaproteobacteria 1236|Gammaproteobacteria S Hemerythrin hhe cation binding - - - - - - - - - - - - Hemerythrin WXD2_k127_4831796_3 401053.AciPR4_3006 1.107e-83 287.0 COG1104@1|root,COG1104@2|Bacteria,3Y389@57723|Acidobacteria,2JIPA@204432|Acidobacteriia 204432|Acidobacteriia E PFAM aminotransferase class V - - 2.8.1.7 ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 - R07460,R11528,R11529 RC01789,RC02313 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 - - - Aminotran_5 WXD2_k127_4831796_9 439235.Dalk_0743 4.272e-26 125.0 COG0457@1|root,COG0457@2|Bacteria,1R64F@1224|Proteobacteria,42Q6D@68525|delta/epsilon subdivisions,2WKT0@28221|Deltaproteobacteria,2MHV1@213118|Desulfobacterales 28221|Deltaproteobacteria S Domain of unknown function (DUF4388) - - - - - - - - - - - - DUF4388 WXD2_k127_4831796_5 379066.GAU_0618 1.761e-56 207.0 COG0682@1|root,COG0682@2|Bacteria,1ZSYY@142182|Gemmatimonadetes 142182|Gemmatimonadetes M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins lgt - - ko:K13292 - - - - ko00000,ko01000 - - - LGT WXD2_k127_4831796_8 926569.ANT_29470 2.695e-31 142.0 COG4447@1|root,COG4447@2|Bacteria,2G66V@200795|Chloroflexi 200795|Chloroflexi G glycosyl hydrolase, BNR repeat-containing protein - - - - - - - - - - - - Sortilin-Vps10 WXD2_k127_4831796_0 1121346.KB899818_gene2620 5.162e-117 389.0 COG0082@1|root,COG0082@2|Bacteria,1TQ40@1239|Firmicutes,4HA0H@91061|Bacilli,26QTH@186822|Paenibacillaceae 91061|Bacilli E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system aroC GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R01714 RC00586 ko00000,ko00001,ko00002,ko01000 - - - Chorismate_synt WXD2_k127_4831796_2 765912.Thimo_1936 5.073e-84 291.0 COG0520@1|root,COG0520@2|Bacteria,1MUPD@1224|Proteobacteria,1RN3S@1236|Gammaproteobacteria,1X2EF@135613|Chromatiales 135613|Chromatiales E PFAM aminotransferase class V - - - - - - - - - - - - Aminotran_5 WXD2_k127_4831796_4 713586.KB900536_gene582 3.49e-62 231.0 COG1322@1|root,COG1322@2|Bacteria,1MWHV@1224|Proteobacteria,1RMB8@1236|Gammaproteobacteria,1WYRX@135613|Chromatiales 135613|Chromatiales S RmuC family - - - ko:K09760 - - - - ko00000 - - - RmuC WXD2_k127_4831796_6 215803.DB30_7902 7.235e-56 202.0 COG0512@1|root,COG0512@2|Bacteria,1MV5Y@1224|Proteobacteria,42QTS@68525|delta/epsilon subdivisions,2X281@28221|Deltaproteobacteria,2Z04A@29|Myxococcales 28221|Deltaproteobacteria EH Peptidase C26 - - 4.1.3.27 ko:K01658 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 M00023 R00985,R00986 RC00010,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 - - - GATase WXD2_k127_4831796_1 1122919.KB905557_gene1197 4.124e-96 333.0 COG0547@1|root,COG0547@2|Bacteria,1TP8U@1239|Firmicutes,4H9KQ@91061|Bacilli,26SMA@186822|Paenibacillaceae 91061|Bacilli E Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) trpD GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0004425,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 ko:K00766,ko:K13497 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R00985,R00986,R01073 RC00010,RC00440,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 - - - Glycos_trans_3N,Glycos_transf_3 WXD2_k127_4831796_7 1267535.KB906767_gene287 5.282e-52 207.0 COG0134@1|root,COG0134@2|Bacteria,3Y3TH@57723|Acidobacteria,2JHV5@204432|Acidobacteriia 204432|Acidobacteriia E Belongs to the TrpC family trpC - 4.1.1.48 ko:K01609 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R03508 RC00944 ko00000,ko00001,ko00002,ko01000 - - - IGPS WXD2_k127_4834063_4 857087.Metme_0810 7.484e-41 166.0 2C8CD@1|root,2Z9AD@2|Bacteria,1N17D@1224|Proteobacteria,1RRIP@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_4834063_0 234267.Acid_0057 6.839e-130 435.0 COG3653@1|root,COG3653@2|Bacteria,3Y3Q2@57723|Acidobacteria 57723|Acidobacteria Q D-aminoacylase domain protein - - 3.5.1.81,3.5.2.3 ko:K01465,ko:K06015 ko00240,ko01100,map00240,map01100 M00051 R01993,R02192 RC00064,RC00328,RC00632 ko00000,ko00001,ko00002,ko01000 - - - Amidohydro_3 WXD2_k127_4834063_1 379066.GAU_0512 5.652e-87 299.0 COG4299@1|root,COG4299@2|Bacteria,1ZT4E@142182|Gemmatimonadetes 142182|Gemmatimonadetes S COGs COG4299 conserved - - - - - - - - - - - - DUF5009 WXD2_k127_4834063_3 404589.Anae109_0937 6.711e-71 249.0 COG0457@1|root,COG0457@2|Bacteria,1N4HS@1224|Proteobacteria,43753@68525|delta/epsilon subdivisions,2X219@28221|Deltaproteobacteria,2Z10F@29|Myxococcales 28221|Deltaproteobacteria S Tetratricopeptide repeat - - - - - - - - - - - - TPR_11 WXD2_k127_4834063_2 404589.Anae109_0938 2.048e-85 293.0 COG1273@1|root,COG1273@2|Bacteria,1N4UX@1224|Proteobacteria,42RD5@68525|delta/epsilon subdivisions,2WMZ1@28221|Deltaproteobacteria,2YWME@29|Myxococcales 28221|Deltaproteobacteria L With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD ku - - ko:K10979 ko03450,map03450 - - - ko00000,ko00001,ko03400 - - - Ku WXD2_k127_4834063_5 870187.Thini_0382 2.16e-30 123.0 COG3695@1|root,COG3695@2|Bacteria,1N7J2@1224|Proteobacteria,1SCIZ@1236|Gammaproteobacteria,463F1@72273|Thiotrichales 72273|Thiotrichales L PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain - - - ko:K07443 - - - - ko00000 - - - DNA_binding_1 WXD2_k127_4835531_0 756067.MicvaDRAFT_0319 2.104e-152 514.0 COG3829@1|root,COG5001@1|root,COG3829@2|Bacteria,COG5001@2|Bacteria,1G0SY@1117|Cyanobacteria,1H7V4@1150|Oscillatoriales 1117|Cyanobacteria T signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - - - - - - - - - - EAL,GGDEF,PAS,PAS_7,PAS_8,PAS_9,Response_reg WXD2_k127_485230_2 765420.OSCT_0508 5.644e-124 411.0 COG1960@1|root,COG1960@2|Bacteria,2G7Q9@200795|Chloroflexi,37704@32061|Chloroflexia 32061|Chloroflexia C Acyl-CoA dehydrogenase, N-terminal domain - - - - - - - - - - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N WXD2_k127_485230_4 234267.Acid_0094 1.872e-50 194.0 COG1960@1|root,COG1960@2|Bacteria 2|Bacteria I acyl-CoA dehydrogenase activity fadE23 - 1.3.8.7 ko:K00249 ko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320 M00013,M00036,M00087 R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754 RC00052,RC00068,RC00076,RC00095,RC00148,RC00246 ko00000,ko00001,ko00002,ko01000 - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N WXD2_k127_485230_0 290397.Adeh_2151 1.577e-286 889.0 28MMZ@1|root,2ZAXK@2|Bacteria,1R7WU@1224|Proteobacteria,42QIC@68525|delta/epsilon subdivisions,2WKJJ@28221|Deltaproteobacteria 28221|Deltaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_485230_8 196162.Noca_3695 2.511e-15 80.0 COG0745@1|root,COG0745@2|Bacteria,2GIZB@201174|Actinobacteria,4DNE1@85009|Propionibacteriales 201174|Actinobacteria T response regulator tcrX GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010106,GO:0019725,GO:0030003,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042592,GO:0042594,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071496,GO:0098771 - ko:K02483 - - - - ko00000,ko02022 - - - Response_reg,Trans_reg_C WXD2_k127_485230_3 266835.14026377 8.79e-61 212.0 COG0662@1|root,COG0662@2|Bacteria,1RJ7D@1224|Proteobacteria,2UAG4@28211|Alphaproteobacteria,43PJI@69277|Phyllobacteriaceae 28211|Alphaproteobacteria G Cupin domain - - - - - - - - - - - - Cupin_2 WXD2_k127_485230_1 76114.ebA2917 4.269e-186 588.0 COG0477@1|root,COG2814@2|Bacteria,1MXPM@1224|Proteobacteria,2VHXT@28216|Betaproteobacteria,2KVE0@206389|Rhodocyclales 206389|Rhodocyclales EGP Sugar (and other) transporter - - - - - - - - - - - - MFS_1,Sugar_tr WXD2_k127_485230_9 1120934.KB894405_gene5372 5.241e-09 69.0 COG1361@1|root,COG1361@2|Bacteria,2I8F1@201174|Actinobacteria,4E0KV@85010|Pseudonocardiales 201174|Actinobacteria M Domain of unknown function DUF11 - - - - - - - - - - - - DUF11,DUF3344 WXD2_k127_485230_7 684949.ATTJ01000001_gene2818 6.988e-19 93.0 COG0607@1|root,COG0607@2|Bacteria,1WKHC@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus P Rhodanese Homology Domain - - - - - - - - - - - - Rhodanese WXD2_k127_485230_5 583355.Caka_0866 3.16e-34 136.0 2EBIG@1|root,335IZ@2|Bacteria,46WF8@74201|Verrucomicrobia 74201|Verrucomicrobia - - - - - - - - - - - - - - - WXD2_k127_485230_6 583355.Caka_0865 3.473e-26 117.0 COG1032@1|root,COG1032@2|Bacteria,46V7P@74201|Verrucomicrobia,3K74V@414999|Opitutae 414999|Opitutae C Domain of unknown function (DUF4070) - - - - - - - - - - - - B12-binding,DUF4070,Radical_SAM WXD2_k127_4855757_0 292459.STH2121 1.418e-239 760.0 COG0021@1|root,COG0021@2|Bacteria,1TPIB@1239|Firmicutes,25E6C@186801|Clostridia 186801|Clostridia G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate tkt - 2.2.1.1 ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R01067,R01641,R01830,R06590 RC00032,RC00226,RC00571,RC01560 ko00000,ko00001,ko00002,ko01000 - - - Transket_pyr,Transketolase_C,Transketolase_N WXD2_k127_4857798_6 316067.Geob_0861 1.252e-23 113.0 COG4221@1|root,COG4221@2|Bacteria,1MUU6@1224|Proteobacteria,42YQ8@68525|delta/epsilon subdivisions,2WU8K@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Belongs to the short-chain dehydrogenases reductases (SDR) family - - - - - - - - - - - - adh_short WXD2_k127_4857798_0 1185652.USDA257_c04170 1.658e-270 855.0 COG3408@1|root,COG3408@2|Bacteria,1MUYU@1224|Proteobacteria,2TQK2@28211|Alphaproteobacteria,4B9N1@82115|Rhizobiaceae 28211|Alphaproteobacteria G Protein involved in amylo-alpha-1,6-glucosidase activity and glycogen biosynthetic process - - - - - - - - - - - - GDE_C,GDE_N_bis WXD2_k127_4857798_4 861299.J421_4041 3.425e-59 211.0 COG4244@1|root,COG4244@2|Bacteria 2|Bacteria E Membrane - - - - - - - - - - - - DUF2231 WXD2_k127_4857798_5 448385.sce0162 6.578e-43 165.0 COG2353@1|root,COG2353@2|Bacteria,1R9XD@1224|Proteobacteria,42TDG@68525|delta/epsilon subdivisions,2WPJP@28221|Deltaproteobacteria,2Z1CP@29|Myxococcales 28221|Deltaproteobacteria S Belongs to the UPF0312 family - - - - - - - - - - - - YceI WXD2_k127_4857798_2 1454007.JAUG01000005_gene2790 1.809e-87 301.0 COG2333@1|root,COG2333@2|Bacteria 2|Bacteria N competence protein COMEC - - - ko:K02238 - M00429 - - ko00000,ko00002,ko02044 3.A.11.1,3.A.11.2 - - LTD,Lactamase_B WXD2_k127_4857798_1 253839.SSNG_06730 3.173e-184 612.0 COG1404@1|root,COG1404@2|Bacteria,2GK3D@201174|Actinobacteria 201174|Actinobacteria O Belongs to the peptidase S8 family - - - - - - - - - - - - PA,Peptidase_S8 WXD2_k127_4857798_3 114615.BRADO1242 2.451e-70 263.0 COG4249@1|root,COG4249@2|Bacteria 2|Bacteria S B-1 B cell differentiation - - - - - - - - - - - - GUN4,Peptidase_C14 WXD2_k127_4876641_0 204669.Acid345_1392 6.132e-188 595.0 COG2804@1|root,COG2804@2|Bacteria,3Y3GB@57723|Acidobacteria,2JHVF@204432|Acidobacteriia 2|Bacteria NU PFAM Type II secretion system protein E pilB - - ko:K02454,ko:K02504,ko:K02652 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02035,ko02044 3.A.15,3.A.15.2 - - T2SSE,T2SSE_N WXD2_k127_4876641_4 316067.Geob_0675 3.724e-25 114.0 COG3170@1|root,COG3170@2|Bacteria,1REZ7@1224|Proteobacteria,42RFW@68525|delta/epsilon subdivisions,2WS8K@28221|Deltaproteobacteria,43VBZ@69541|Desulfuromonadales 28221|Deltaproteobacteria NU Protein of unknown function (DUF3108) - - - - - - - - - - - - DUF3108 WXD2_k127_4876641_3 1382359.JIAL01000001_gene2673 3.776e-41 165.0 COG0859@1|root,COG0859@2|Bacteria,3Y3EJ@57723|Acidobacteria,2JIYJ@204432|Acidobacteriia 204432|Acidobacteriia M PFAM glycosyl transferase family 9 - - - ko:K02841 ko00540,ko01100,map00540,map01100 M00080 - - ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT9 - Glyco_transf_9 WXD2_k127_4876641_2 1144275.COCOR_02686 1.542e-47 177.0 COG0615@1|root,COG0615@2|Bacteria,1REW3@1224|Proteobacteria,42SGQ@68525|delta/epsilon subdivisions,2WPTP@28221|Deltaproteobacteria 28221|Deltaproteobacteria H Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose rfaE - - - - - - - - - - - CTP_transf_like WXD2_k127_4876641_1 1047013.AQSP01000111_gene1672 1.57e-68 246.0 COG2870@1|root,COG2870@2|Bacteria,2NNUT@2323|unclassified Bacteria 2|Bacteria M pfkB family carbohydrate kinase rfaE - 2.7.1.167,2.7.7.70 ko:K03272 ko00540,ko01100,map00540,map01100 M00064 R05644,R05646 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko01005 - - - CTP_transf_like,PfkB WXD2_k127_4876641_5 1330700.JQNC01000003_gene192 8.966e-14 73.0 2E5CT@1|root,3304V@2|Bacteria,1WKNE@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus - - - - - - - - - - - - - - - WXD2_k127_4883608_4 1100720.ALKN01000037_gene1886 1.179e-16 81.0 2EIMJ@1|root,33CCU@2|Bacteria,1NMXZ@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - WXD2_k127_4883608_3 1265502.KB905951_gene863 4.15e-17 94.0 COG4191@1|root,COG4191@2|Bacteria,1QU7R@1224|Proteobacteria,2VKY0@28216|Betaproteobacteria,4ADE1@80864|Comamonadaceae 28216|Betaproteobacteria T PFAM ATP-binding region, ATPase domain protein - - - - - - - - - - - - HATPase_c,HisKA WXD2_k127_4883608_1 644282.Deba_1916 9.98e-102 361.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2WIT0@28221|Deltaproteobacteria 28221|Deltaproteobacteria T two component, sigma54 specific, transcriptional regulator, Fis family - - - ko:K02481 - - - - ko00000,ko02022 - - - HTH_8,Response_reg,Sigma54_activat WXD2_k127_4883608_5 247490.KSU1_B0440 1.111e-05 56.0 2AVTU@1|root,31MME@2|Bacteria,2J2ZG@203682|Planctomycetes 203682|Planctomycetes - - - - - - - - - - - - - - - WXD2_k127_4883608_2 204669.Acid345_0181 4.485e-47 175.0 COG0526@1|root,COG0526@2|Bacteria,3Y4K8@57723|Acidobacteria,2JJAP@204432|Acidobacteriia 204432|Acidobacteriia CO Glutathione peroxidase - - - ko:K02199 - - - - ko00000,ko03110 - - - AhpC-TSA WXD2_k127_4883608_0 768710.DesyoDRAFT_1775 4.386e-124 420.0 COG1032@1|root,COG1032@2|Bacteria 2|Bacteria C radical SAM domain protein - - - ko:K22318 - - - - ko00000 - - - B12-binding,Radical_SAM WXD2_k127_4902318_1 1254432.SCE1572_34585 5.428e-30 126.0 COG3547@1|root,COG3547@2|Bacteria 2|Bacteria L Transposase (IS116 IS110 IS902 family) tnp3510a - - - - - - - - - - - DEDD_Tnp_IS110,Transposase_20 WXD2_k127_4902318_0 1121920.AUAU01000001_gene2279 0.0 1180.0 COG4447@1|root,COG4447@2|Bacteria,3Y487@57723|Acidobacteria 57723|Acidobacteria S cellulose binding - - - - - - - - - - - - Sortilin-Vps10 WXD2_k127_490828_3 709986.Deima_0402 5.743e-66 233.0 COG0596@1|root,COG0596@2|Bacteria,1WKZP@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S Serine aminopeptidase, S33 yfhM - - - - - - - - - - - Abhydrolase_1 WXD2_k127_490828_0 378806.STAUR_5205 1.42e-281 877.0 COG0405@1|root,COG0405@2|Bacteria,1MUV6@1224|Proteobacteria,42NY8@68525|delta/epsilon subdivisions,2WJNT@28221|Deltaproteobacteria,2YXXC@29|Myxococcales 28221|Deltaproteobacteria E Gamma-glutamyltranspeptidase - - 2.3.2.2,3.4.19.13 ko:K00681 ko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100 - R00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935 RC00064,RC00090,RC00096 ko00000,ko00001,ko01000,ko01002 - - - G_glu_transpept WXD2_k127_490828_2 234267.Acid_1587 1.09e-93 322.0 COG2805@1|root,COG2805@2|Bacteria,3Y316@57723|Acidobacteria 57723|Acidobacteria NU Type II/IV secretion system protein - - - ko:K02669 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - T2SSE WXD2_k127_490828_1 1144275.COCOR_00799 1.641e-137 464.0 COG3227@1|root,COG3227@2|Bacteria,1P416@1224|Proteobacteria,439FH@68525|delta/epsilon subdivisions,2X4R3@28221|Deltaproteobacteria,2YZF2@29|Myxococcales 28221|Deltaproteobacteria E Thermolysin metallopeptidase, alpha-helical domain - - 3.4.24.28 ko:K01400 - - - - ko00000,ko01000,ko01002 - - - FTP,PPC,Peptidase_M4,Peptidase_M4_C WXD2_k127_4918127_2 1121481.AUAS01000002_gene3509 5.344e-21 102.0 28QBS@1|root,2ZCUB@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_4918127_1 1122611.KB903939_gene313 2.627e-54 218.0 COG0515@1|root,COG4403@1|root,COG0515@2|Bacteria,COG4403@2|Bacteria,2H5BJ@201174|Actinobacteria 201174|Actinobacteria KLT Lanthionine synthetase C-like protein - - - - - - - - - - - - LANC_like WXD2_k127_4918127_0 945713.IALB_1070 1.971e-236 742.0 COG1012@1|root,COG1012@2|Bacteria 2|Bacteria C belongs to the aldehyde dehydrogenase family pruA - 1.2.1.88 ko:K00294 ko00250,ko00330,ko01100,map00250,map00330,map01100 - R00245,R00707,R00708,R04444,R04445,R05051 RC00080,RC00216,RC00242,RC00255 ko00000,ko00001,ko01000 - - - Aldedh WXD2_k127_4918967_2 945713.IALB_0990 3.938e-64 244.0 COG0667@1|root,COG0667@2|Bacteria 2|Bacteria C Aldo Keto reductase - - - - - - - - - - - - Aldo_ket_red WXD2_k127_4918967_0 1111479.AXAR01000001_gene140 2.732e-135 452.0 COG0111@1|root,COG0111@2|Bacteria,1V410@1239|Firmicutes,4H9PH@91061|Bacilli,2784J@186823|Alicyclobacillaceae 91061|Bacilli E D-isomer specific 2-hydroxyacid dehydrogenase serA - 1.1.1.399,1.1.1.95 ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R01513 RC00031 ko00000,ko00001,ko00002,ko01000,ko04147 - - iYO844.BSU23070 2-Hacid_dh,2-Hacid_dh_C,ACT WXD2_k127_4918967_1 457396.CSBG_03387 4.247e-81 282.0 COG0075@1|root,COG0075@2|Bacteria,1TPS0@1239|Firmicutes,24919@186801|Clostridia,36E72@31979|Clostridiaceae 186801|Clostridia E Aminotransferase - - - - - - - - - - - - Aminotran_5 WXD2_k127_4918967_3 1116472.MGMO_68c00080 2.287e-44 174.0 COG0560@1|root,COG0560@2|Bacteria,1PIND@1224|Proteobacteria,1S9GK@1236|Gammaproteobacteria,1XEK5@135618|Methylococcales 135618|Methylococcales E haloacid dehalogenase-like hydrolase - - 3.1.3.3 ko:K01079 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R00582 RC00017 ko00000,ko00001,ko00002,ko01000,ko01009 - - - HAD WXD2_k127_4918967_4 1123508.JH636445_gene6823 4.024e-33 136.0 COG0546@1|root,COG0546@2|Bacteria,2J0GC@203682|Planctomycetes 203682|Planctomycetes S haloacid dehalogenase-like hydrolase - - 3.1.3.18 ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 - R01334 RC00017 ko00000,ko00001,ko01000 - - - HAD_2 WXD2_k127_4918967_5 1433287.X808_2720 4.725e-19 93.0 COG0746@1|root,COG1763@1|root,COG0746@2|Bacteria,COG1763@2|Bacteria,1RH3M@1224|Proteobacteria,1RN20@1236|Gammaproteobacteria,1Y7E3@135625|Pasteurellales 135625|Pasteurellales H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor mobA - 2.7.7.77 ko:K13818 ko00790,ko01100,map00790,map01100 - R11581 - ko00000,ko00001,ko01000 - - - MobB,NTP_transf_3 WXD2_k127_4921167_0 1267535.KB906767_gene2552 0.0 1148.0 COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,3Y3BP@57723|Acidobacteria,2JMMF@204432|Acidobacteriia 204432|Acidobacteriia M Tricorn protease PDZ domain - - - ko:K08676 - - - - ko00000,ko01000,ko01002 - - - PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ WXD2_k127_4921167_1 28072.Nos7524_4000 8.034e-24 104.0 2C3PV@1|root,3307H@2|Bacteria,1GB76@1117|Cyanobacteria 1117|Cyanobacteria S Protein of unknown function (DUF2834) - - - - - - - - - - - - DUF2834 WXD2_k127_4921167_2 392500.Swoo_0028 3.463e-05 54.0 COG2267@1|root,COG2267@2|Bacteria,1N0W6@1224|Proteobacteria,1S931@1236|Gammaproteobacteria 1236|Gammaproteobacteria I carboxylic ester hydrolase activity - - - - - - - - - - - - Abhydrolase_6,Hydrolase_4 WXD2_k127_4925163_2 1125863.JAFN01000001_gene496 1.369e-50 188.0 COG0101@1|root,COG0101@2|Bacteria,1MUYI@1224|Proteobacteria,42RTC@68525|delta/epsilon subdivisions,2WNQ6@28221|Deltaproteobacteria 28221|Deltaproteobacteria J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs truA GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 ko:K06173 - - - - ko00000,ko01000,ko03016 - - - PseudoU_synth_1 WXD2_k127_4925163_1 1121468.AUBR01000029_gene1582 5.445e-82 283.0 COG0020@1|root,COG0020@2|Bacteria,1TQTS@1239|Firmicutes,247TE@186801|Clostridia,42F7X@68295|Thermoanaerobacterales 186801|Clostridia H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids uppS - 2.5.1.31 ko:K00806 ko00900,ko01110,map00900,map01110 - R06447 RC00279,RC02839 ko00000,ko00001,ko01000,ko01006 - - - Prenyltransf WXD2_k127_4925163_3 1499967.BAYZ01000078_gene990 3.24e-48 183.0 COG4589@1|root,COG4589@2|Bacteria,2NPVB@2323|unclassified Bacteria 2|Bacteria S Belongs to the CDS family cdsA GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044464,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 M00093 R01799 RC00002 ko00000,ko00001,ko00002,ko01000 - - iSB619.SA_RS06255 CTP_transf_1 WXD2_k127_4925163_0 667014.Thein_2089 2.628e-115 384.0 COG0743@1|root,COG0743@2|Bacteria,2GHA5@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) dxr - 1.1.1.267 ko:K00099 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05688 RC01452 ko00000,ko00001,ko00002,ko01000 - - - DXPR_C,DXP_redisom_C,DXP_reductoisom WXD2_k127_4926532_2 1500893.JQNB01000001_gene2798 1.203e-62 224.0 COG1376@1|root,COG1376@2|Bacteria,1RA7Q@1224|Proteobacteria,1T0AZ@1236|Gammaproteobacteria,1XCZV@135614|Xanthomonadales 135614|Xanthomonadales S L,D-transpeptidase catalytic domain - - - - - - - - - - - - YkuD_2 WXD2_k127_4926532_1 1254432.SCE1572_09355 9.718e-66 231.0 COG2761@1|root,COG2761@2|Bacteria,1NXUB@1224|Proteobacteria,42TBH@68525|delta/epsilon subdivisions,2WPJ5@28221|Deltaproteobacteria,2YW2S@29|Myxococcales 28221|Deltaproteobacteria Q DSBA-like thioredoxin domain - - - - - - - - - - - - DSBA WXD2_k127_4926532_0 1163398.AJJP01000141_gene3442 3.702e-231 732.0 COG0033@1|root,COG0033@2|Bacteria,1MU5S@1224|Proteobacteria,1RPDV@1236|Gammaproteobacteria 1236|Gammaproteobacteria G Phosphoglucomutase pgm GO:0000271,GO:0003674,GO:0003824,GO:0004614,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0005996,GO:0006006,GO:0006012,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016052,GO:0016853,GO:0016866,GO:0016868,GO:0019318,GO:0019320,GO:0019388,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0055114,GO:0071704,GO:1901575,GO:1901576 5.4.2.2 ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 M00549 R00959,R01057,R08639 RC00408 ko00000,ko00001,ko00002,ko01000 - - iAPECO1_1312.APECO1_1376,iECED1_1282.ECED1_0670,iECNA114_1301.ECNA114_0627,iECOK1_1307.ECOK1_0699,iECP_1309.ECP_0709,iECS88_1305.ECS88_0725,iLF82_1304.LF82_1632,iNRG857_1313.NRG857_03110,iUMN146_1321.UM146_14115,iYL1228.KPN_00711 PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV WXD2_k127_4934864_1 84531.JMTZ01000005_gene2391 2.78e-97 342.0 COG2304@1|root,COG2304@2|Bacteria,1R8EZ@1224|Proteobacteria,1SG9K@1236|Gammaproteobacteria,1XB1U@135614|Xanthomonadales 135614|Xanthomonadales S IgA Peptidase M64 - - - - - - - - - - - - M64_N,Peptidase_M64 WXD2_k127_4934864_4 404589.Anae109_3600 3.43e-24 106.0 COG0239@1|root,COG0239@2|Bacteria,1MZNH@1224|Proteobacteria,42V4I@68525|delta/epsilon subdivisions,2WRJJ@28221|Deltaproteobacteria,2YW4G@29|Myxococcales 28221|Deltaproteobacteria D Important for reducing fluoride concentration in the cell, thus reducing its toxicity crcB GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - ko:K06199 - - - - ko00000,ko02000 1.A.43.1,1.A.43.2,1.A.43.3 - - CRCB WXD2_k127_4934864_2 1121920.AUAU01000005_gene1090 4.462e-75 261.0 COG2884@1|root,COG2884@2|Bacteria 2|Bacteria D Cell division ATP-binding protein ftsE ftsE GO:0000166,GO:0000287,GO:0000910,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0007049,GO:0008144,GO:0008150,GO:0008356,GO:0009898,GO:0009966,GO:0009987,GO:0010646,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019897,GO:0019898,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0030145,GO:0030554,GO:0031234,GO:0032153,GO:0032506,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042173,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043937,GO:0043938,GO:0044085,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0046677,GO:0046872,GO:0046914,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051301,GO:0065007,GO:0070297,GO:0071840,GO:0071944,GO:0090529,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1902531 - ko:K09811,ko:K09812 ko02010,map02010 M00256 - - ko00000,ko00001,ko00002,ko02000,ko03036 3.A.1.140 - - ABC_tran WXD2_k127_4934864_3 671143.DAMO_2528 2.291e-42 167.0 COG2177@1|root,COG2177@2|Bacteria,2NPIM@2323|unclassified Bacteria 2|Bacteria D Belongs to the ABC-4 integral membrane protein family. FtsX subfamily ftsX GO:0000910,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006928,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0008150,GO:0008356,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009966,GO:0009987,GO:0010033,GO:0010646,GO:0016020,GO:0016021,GO:0016043,GO:0019221,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0030312,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0032153,GO:0032506,GO:0034097,GO:0040007,GO:0040011,GO:0042173,GO:0042221,GO:0043207,GO:0043937,GO:0043938,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0048583,GO:0048870,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070098,GO:0070297,GO:0070887,GO:0071310,GO:0071345,GO:0071840,GO:0071944,GO:0071976,GO:0090529,GO:1902531 - ko:K09811,ko:K09812 ko02010,map02010 M00256 - - ko00000,ko00001,ko00002,ko02000,ko03036 3.A.1.140 - - FtsX WXD2_k127_4934864_0 673860.AciM339_1462 1.81e-168 547.0 COG3404@1|root,arCOG05394@2157|Archaea,arCOG05395@2157|Archaea,2XX41@28890|Euryarchaeota,3F3A8@33867|unclassified Euryarchaeota 28890|Euryarchaeota E Formiminotransferase domain, N-terminal subdomain - - 2.1.2.5,4.3.1.4 ko:K00603,ko:K13990 ko00340,ko00670,ko01100,map00340,map00670,map01100 - R02287,R02302,R03189 RC00165,RC00221,RC00223,RC00688,RC00870 ko00000,ko00001,ko01000,ko03036,ko04147 - - - FTCD,FTCD_C,FTCD_N WXD2_k127_4936761_2 247490.KSU1_C1600 1.8e-117 394.0 COG2148@1|root,COG2148@2|Bacteria,2IYWX@203682|Planctomycetes 203682|Planctomycetes M Bacterial sugar transferase - - - - - - - - - - - - Bac_transf,CoA_binding_3 WXD2_k127_4936761_1 379066.GAU_3087 1.712e-159 514.0 COG0076@1|root,COG0076@2|Bacteria,1ZSZN@142182|Gemmatimonadetes 142182|Gemmatimonadetes E Pyridoxal-dependent decarboxylase conserved domain - - 4.1.1.105,4.1.1.28 ko:K01593 ko00350,ko00360,ko00380,ko00901,ko00950,ko00965,ko01100,ko01110,ko04726,ko04728,ko05030,ko05031,ko05034,map00350,map00360,map00380,map00901,map00950,map00965,map01100,map01110,map04726,map04728,map05030,map05031,map05034 M00037,M00042 R00685,R00699,R00736,R02080,R02701,R04909 RC00299 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Pyridoxal_deC WXD2_k127_4936761_0 1123508.JH636442_gene4220 5.517e-206 657.0 COG0514@1|root,COG0514@2|Bacteria,2IX4R@203682|Planctomycetes 203682|Planctomycetes L DEAD DEAH box helicase - - 3.6.4.12 ko:K03654 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,HRDC,HTH_40,Helicase_C,RQC,RecQ_Zn_bind WXD2_k127_4936761_9 1128421.JAGA01000003_gene3648 3.631e-12 79.0 COG5617@1|root,COG5617@2|Bacteria 2|Bacteria M Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - WXD2_k127_4936761_4 861299.J421_2109 9.64e-84 292.0 COG0349@1|root,COG0349@2|Bacteria,1ZSPS@142182|Gemmatimonadetes 142182|Gemmatimonadetes J 3'-5' exonuclease - - 3.1.13.5 ko:K03684 - - - - ko00000,ko01000,ko03016 - - - DNA_pol_A_exo1,HRDC WXD2_k127_4936761_3 1052684.PPM_0160 3.918e-113 375.0 COG0492@1|root,COG0492@2|Bacteria,1TNZS@1239|Firmicutes,4HA4N@91061|Bacilli,26QN5@186822|Paenibacillaceae 91061|Bacilli C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family trxB1 - 1.8.1.9 ko:K00384 ko00450,map00450 - R02016,R03596,R09372 RC00013,RC02518,RC02873 ko00000,ko00001,ko01000 - - - Pyr_redox_2 WXD2_k127_4936761_6 1499967.BAYZ01000028_gene1318 4.129e-47 180.0 COG0739@1|root,COG0739@2|Bacteria,2NPG3@2323|unclassified Bacteria 2|Bacteria M Peptidase family M23 - - - ko:K21471 - - - - ko00000,ko01000,ko01002,ko01011 - - - Peptidase_M23 WXD2_k127_4936761_5 404589.Anae109_2261 2.654e-64 222.0 COG2131@1|root,COG2131@2|Bacteria,1RD1P@1224|Proteobacteria,42RHI@68525|delta/epsilon subdivisions,2WNGV@28221|Deltaproteobacteria,2YV1R@29|Myxococcales 28221|Deltaproteobacteria F deaminase comEB - 3.5.4.12 ko:K01493 ko00240,ko01100,map00240,map01100 M00429 R01663 RC00074 ko00000,ko00001,ko00002,ko01000,ko02044 - - - dCMP_cyt_deam_1 WXD2_k127_4936761_8 767434.Fraau_1254 8.345e-23 105.0 COG1214@1|root,COG1214@2|Bacteria,1MXPH@1224|Proteobacteria,1RPYX@1236|Gammaproteobacteria,1X633@135614|Xanthomonadales 135614|Xanthomonadales O glycoprotease - - - ko:K14742 - - - - ko00000,ko03016 - - - Peptidase_M22 WXD2_k127_4936761_7 1305732.JAGG01000001_gene1123 1.25e-23 108.0 COG0454@1|root,COG0456@2|Bacteria,2IM9R@201174|Actinobacteria,4FPUS@85023|Microbacteriaceae 201174|Actinobacteria K Acetyltransferase (GNAT) domain rimI GO:0003674,GO:0003824,GO:0004596,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031365,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.128 ko:K03789 - - - - ko00000,ko01000,ko03009 - - - Acetyltransf_1 WXD2_k127_494522_6 1122951.ATUE01000005_gene1686 0.0001651 44.0 COG0115@1|root,COG0115@2|Bacteria,1MVB0@1224|Proteobacteria,1RP6Z@1236|Gammaproteobacteria,3NK5G@468|Moraxellaceae 1236|Gammaproteobacteria E Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family ilvE GO:0003674,GO:0003824,GO:0004084,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006531,GO:0006532,GO:0006551,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009081,GO:0009082,GO:0009098,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0042802,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.42 ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00036,M00119,M00570 R01090,R01214,R02199,R10991 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 - - iB21_1397.B21_03597,iECBD_1354.ECBD_4269,iECB_1328.ECB_03648,iECD_1391.ECD_03648,iECO103_1326.ECO103_4394 Aminotran_4 WXD2_k127_494522_3 877414.ATWA01000028_gene1372 1.466e-10 67.0 COG1917@1|root,COG2207@1|root,COG1917@2|Bacteria,COG2207@2|Bacteria,1V1RQ@1239|Firmicutes,24C1H@186801|Clostridia 186801|Clostridia K helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - HTH_18,HTH_AraC WXD2_k127_494522_5 706587.Desti_3899 2.825e-07 59.0 COG0515@1|root,COG0664@1|root,COG0515@2|Bacteria,COG0664@2|Bacteria,1MV1P@1224|Proteobacteria,42Q67@68525|delta/epsilon subdivisions,2WKZ1@28221|Deltaproteobacteria,2MRS2@213462|Syntrophobacterales 28221|Deltaproteobacteria KLT PFAM Protein kinase - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase,TPR_8,cNMP_binding WXD2_k127_494522_0 760568.Desku_1707 2.938e-36 141.0 COG1694@1|root,COG1694@2|Bacteria,1V701@1239|Firmicutes,24KA0@186801|Clostridia,2621J@186807|Peptococcaceae 186801|Clostridia S PFAM MazG nucleotide pyrophosphohydrolase - - - - - - - - - - - - MazG WXD2_k127_494522_1 1254432.SCE1572_14740 4.307e-34 143.0 COG0741@1|root,COG0741@2|Bacteria,1MZ4X@1224|Proteobacteria,42TVX@68525|delta/epsilon subdivisions,2WP4F@28221|Deltaproteobacteria,2YV7H@29|Myxococcales 28221|Deltaproteobacteria M Transglycosylase - - - ko:K08309 - - - - ko00000,ko01000,ko01011 - GH23 - DUF4124,SLT WXD2_k127_494522_2 378806.STAUR_5400 3.023e-13 82.0 COG0457@1|root,COG2013@1|root,COG0457@2|Bacteria,COG2013@2|Bacteria,1P3IM@1224|Proteobacteria,431ZR@68525|delta/epsilon subdivisions,2WWC2@28221|Deltaproteobacteria,2YVCM@29|Myxococcales 28221|Deltaproteobacteria S Mitochondrial biogenesis AIM24 - - - - - - - - - - - - AIM24,TPR_16,TPR_19,TPR_8 WXD2_k127_494522_4 66897.DJ64_12145 4.501e-10 72.0 COG2013@1|root,COG2013@2|Bacteria,2GNEK@201174|Actinobacteria 201174|Actinobacteria S Mitochondrial biogenesis AIM24 - - - - - - - - - - - - AIM24 WXD2_k127_495576_1 204669.Acid345_2144 4.979e-113 381.0 COG0621@1|root,COG0621@2|Bacteria,3Y362@57723|Acidobacteria,2JIYW@204432|Acidobacteriia 204432|Acidobacteriia H Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 rimO - 2.8.4.4 ko:K14441 - - R10652 RC00003,RC03217 ko00000,ko01000,ko03009 - - - Radical_SAM,UPF0004 WXD2_k127_495576_0 204669.Acid345_0539 3.143e-130 444.0 COG1305@1|root,COG1305@2|Bacteria,3Y3A2@57723|Acidobacteria,2JHZ8@204432|Acidobacteriia 204432|Acidobacteriia E Domain of Unknown Function with PDB structure (DUF3857) - - - - - - - - - - - - DUF3857,Transglut_core WXD2_k127_495576_2 204669.Acid345_0540 1.827e-102 358.0 COG1305@1|root,COG1305@2|Bacteria,3Y2TK@57723|Acidobacteria,2JHX7@204432|Acidobacteriia 204432|Acidobacteriia E Domain of Unknown Function with PDB structure (DUF3857) - - - - - - - - - - - - DUF3857,Transglut_core WXD2_k127_4963429_4 765912.Thimo_0802 0.0004737 49.0 COG1943@1|root,COG1943@2|Bacteria,1MX0E@1224|Proteobacteria,1RPJH@1236|Gammaproteobacteria,1WWU7@135613|Chromatiales 135613|Chromatiales L PFAM Transposase IS200 like - - - - - - - - - - - - Y1_Tnp WXD2_k127_4963429_0 485913.Krac_1006 2.415e-95 330.0 COG0477@1|root,COG2814@2|Bacteria,2G7AV@200795|Chloroflexi 200795|Chloroflexi EGP PFAM major facilitator superfamily MFS_1 - - - ko:K08162 - - - - ko00000,ko02000 2.A.1.2.21 - - MFS_1,MFS_1_like,Sugar_tr WXD2_k127_4963429_2 1089553.Tph_c15800 1.978e-54 201.0 COG1120@1|root,COG1120@2|Bacteria,1TP2Q@1239|Firmicutes,2492Z@186801|Clostridia,42FXA@68295|Thermoanaerobacterales 186801|Clostridia P PFAM ABC transporter related - - 3.6.3.34 ko:K02013 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.14 - - ABC_tran WXD2_k127_4963429_1 1449976.KALB_7694 9.092e-60 220.0 COG0609@1|root,COG0609@2|Bacteria,2GK8Z@201174|Actinobacteria,4E0ZT@85010|Pseudonocardiales 201174|Actinobacteria P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily - - - ko:K02015 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14 - - FecCD WXD2_k127_4963429_3 589865.DaAHT2_1558 6.625e-35 145.0 COG0614@1|root,COG0614@2|Bacteria,1MWVF@1224|Proteobacteria,42PQA@68525|delta/epsilon subdivisions,2WKNZ@28221|Deltaproteobacteria,2MIYZ@213118|Desulfobacterales 28221|Deltaproteobacteria P PFAM periplasmic binding protein - - - ko:K02016 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14 - - Peripla_BP_2 WXD2_k127_4967195_1 234267.Acid_5235 4.831e-124 413.0 COG0402@1|root,COG0402@2|Bacteria,3Y64N@57723|Acidobacteria 57723|Acidobacteria F Amidohydrolase family - - 3.5.4.28,3.5.4.31 ko:K12960 ko00270,ko01100,map00270,map01100 - R09660 RC00477 ko00000,ko00001,ko01000 - - - Amidohydro_1 WXD2_k127_4967195_2 383372.Rcas_3043 4.462e-38 165.0 COG1971@1|root,COG1971@2|Bacteria,2G8IE@200795|Chloroflexi,376IX@32061|Chloroflexia 32061|Chloroflexia P Probably functions as a manganese efflux pump - - - - - - - - - - - - - WXD2_k127_4967195_0 1379698.RBG1_1C00001G1265 3.677e-138 453.0 COG2204@1|root,COG2204@2|Bacteria,2NNWS@2323|unclassified Bacteria 2|Bacteria T Two component, sigma54 specific, transcriptional regulator, Fis family - - - - - - - - - - - - HTH_8,Response_reg,Sigma54_activat WXD2_k127_4967195_3 204669.Acid345_4379 1.696e-06 52.0 2DTVW@1|root,33MW2@2|Bacteria,3Y606@57723|Acidobacteria 57723|Acidobacteria - - - - - - - - - - - - - - - WXD2_k127_4975472_1 671143.DAMO_1641 2.862e-46 181.0 COG0241@1|root,COG0859@1|root,COG0241@2|Bacteria,COG0859@2|Bacteria,2NPK4@2323|unclassified Bacteria 2|Bacteria E D,D-heptose 1,7-bisphosphate phosphatase rfaF - 2.7.1.167,2.7.7.70,3.1.3.82,3.1.3.83,5.3.1.28 ko:K02841,ko:K02843,ko:K02849,ko:K03271,ko:K03272,ko:K03273 ko00540,ko01100,map00540,map01100 M00064,M00080 R05644,R05645,R05646,R05647,R09768,R09769,R09771 RC00002,RC00017,RC00078,RC00434 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT9 - Glyco_transf_9,Hydrolase_like WXD2_k127_4975472_3 243231.GSU3420 1.802e-24 120.0 COG1560@1|root,COG1560@2|Bacteria,1MVNI@1224|Proteobacteria,42N6U@68525|delta/epsilon subdivisions,2WQ3X@28221|Deltaproteobacteria,43UMV@69541|Desulfuromonadales 28221|Deltaproteobacteria M PFAM lipid A biosynthesis acyltransferase htrB - 2.3.1.241 ko:K02517 ko00540,ko01100,map00540,map01100 M00060 R05146 RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Lip_A_acyltrans WXD2_k127_4975472_2 1198114.AciX9_0840 1.164e-36 159.0 COG1663@1|root,COG1663@2|Bacteria,3Y5FQ@57723|Acidobacteria,2JJ24@204432|Acidobacteriia 204432|Acidobacteriia F Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) lpxK - 2.7.1.130 ko:K00912 ko00540,ko01100,map00540,map01100 M00060 R04657 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko01005 - - - LpxK WXD2_k127_4975472_0 373903.Hore_18890 2.998e-76 272.0 COG0859@1|root,COG1519@1|root,COG0859@2|Bacteria,COG1519@2|Bacteria,1TT7Z@1239|Firmicutes,24KS2@186801|Clostridia,3WCB0@53433|Halanaerobiales 186801|Clostridia M 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) - - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 ko:K02527 ko00540,ko01100,map00540,map01100 M00060,M00080 R04658,R05074,R09763 RC00009,RC00077,RC00247 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT30 - Glyco_transf_9,Glycos_transf_N WXD2_k127_4979164_5 404589.Anae109_0486 8.809e-26 125.0 COG0457@1|root,COG0741@1|root,COG0457@2|Bacteria,COG0741@2|Bacteria,1MV3F@1224|Proteobacteria,42N7A@68525|delta/epsilon subdivisions,2WPM9@28221|Deltaproteobacteria 28221|Deltaproteobacteria M transglycosylase - - - ko:K08309 - - - - ko00000,ko01000,ko01011 - GH23 - SLT,TPR_16,TPR_6,TPR_8 WXD2_k127_4979164_0 1267534.KB906756_gene293 3.961e-121 415.0 COG0438@1|root,COG0438@2|Bacteria,3Y3CI@57723|Acidobacteria,2JKK7@204432|Acidobacteriia 204432|Acidobacteriia M glycosyl transferase group 1 - - - ko:K00754 - - - - ko00000,ko01000 - GT4 - Glyco_transf_4,Glycos_transf_1 WXD2_k127_4979164_1 1191523.MROS_1703 7.633e-67 235.0 COG2120@1|root,COG2120@2|Bacteria 2|Bacteria S N-acetylglucosaminylinositol deacetylase activity bshB1 - - ko:K01463 - - - - ko00000,ko01000 - - - PIG-L WXD2_k127_4979164_3 234267.Acid_7134 2.054e-43 178.0 COG4365@1|root,COG4365@2|Bacteria,3Y4D6@57723|Acidobacteria 57723|Acidobacteria S Belongs to the BshC family bshC - - ko:K22136 - - - - ko00000 - - - BshC WXD2_k127_4979164_4 1329516.JPST01000005_gene1396 5.87e-43 166.0 COG0500@1|root,COG2226@2|Bacteria,1V45D@1239|Firmicutes,4HG4Y@91061|Bacilli,27BS9@186824|Thermoactinomycetaceae 91061|Bacilli Q ubiE/COQ5 methyltransferase family - - - - - - - - - - - - Methyltransf_25 WXD2_k127_4979164_2 1144275.COCOR_01949 4.388e-64 232.0 COG1100@1|root,COG1100@2|Bacteria,1R6NS@1224|Proteobacteria,42NIX@68525|delta/epsilon subdivisions,2WJ44@28221|Deltaproteobacteria,2YU2F@29|Myxococcales 28221|Deltaproteobacteria S ADP-ribosylation factor family mglA GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - ko:K06883 - - - - ko00000 - - - Arf,Ras WXD2_k127_4983098_1 1125863.JAFN01000001_gene2409 6.538e-59 211.0 COG1008@1|root,COG1008@2|Bacteria,1MV7V@1224|Proteobacteria,42NGD@68525|delta/epsilon subdivisions,2WJDC@28221|Deltaproteobacteria 28221|Deltaproteobacteria C TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M nuoM-1 - 1.6.5.3 ko:K00342 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q5_N,Proton_antipo_M WXD2_k127_4983098_0 485918.Cpin_7008 2.808e-165 535.0 COG1009@1|root,COG1009@2|Bacteria,4NEBM@976|Bacteroidetes,1IQ9D@117747|Sphingobacteriia 976|Bacteroidetes CP COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit nuoL - 1.6.5.3 ko:K00341 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Proton_antipo_C,Proton_antipo_M,Proton_antipo_N WXD2_k127_4985299_4 1301098.PKB_3611 2.634e-07 53.0 COG3384@1|root,COG3384@2|Bacteria,1NRAU@1224|Proteobacteria 1224|Proteobacteria S Component of the 2-aminophenol 1,6-dioxygenase complex that catalyzes the ring fission of 2-aminophenol to produce 2- aminomuconic 6-semialdehyde. AmnB seems to be the catalytic subunit of the complex. The enzyme is also active toward 2-amino- p-cresol, 6-amino-m-cresol,2-amino-m-cresol, 2-amino-4,5-dimethylphenol,2-amino-4-chlorophenol, and catechol - - 1.13.11.74,1.13.11.76 ko:K15059 ko00627,ko01120,map00627,map01120 - R05405 RC00387 ko00000,ko00001,ko01000 - - - LigB WXD2_k127_4985299_0 1227739.Hsw_0099 2.115e-195 621.0 COG1012@1|root,COG1012@2|Bacteria,4NEB7@976|Bacteroidetes,47JKD@768503|Cytophagia 976|Bacteroidetes C Belongs to the aldehyde dehydrogenase family - - 1.2.1.3,1.2.1.32,1.2.1.85 ko:K00128,ko:K00138,ko:K10217 ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00362,ko00380,ko00410,ko00561,ko00620,ko00622,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00362,map00380,map00410,map00561,map00620,map00622,map00625,map00903,map00981,map01100,map01110,map01120,map01130,map01220 M00038,M00135,M00569 R00264,R00631,R00710,R00711,R00904,R01752,R01986,R02549,R02678,R02762,R02940,R02957,R03283,R03869,R03889,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R05353,R06366,R08146 RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00254,RC00816,RC01500 ko00000,ko00001,ko00002,ko01000 - - - Aldedh WXD2_k127_4985299_3 1120917.AQXM01000051_gene292 7.939e-29 129.0 COG4448@1|root,COG4448@2|Bacteria,2GJA7@201174|Actinobacteria,1WARJ@1268|Micrococcaceae 201174|Actinobacteria E L-asparaginase II ansA - - - - - - - - - - - Asparaginase_II WXD2_k127_4985299_1 443255.SCLAV_p0535 1.326e-110 373.0 2F3XQ@1|root,33WPT@2|Bacteria 2|Bacteria S Luciferase-like monooxygenase - - - - - - - - - - - - Bac_luciferase WXD2_k127_4985299_2 485917.Phep_4285 5.471e-57 213.0 COG2173@1|root,COG2173@2|Bacteria,4NE2K@976|Bacteroidetes,1IS0X@117747|Sphingobacteriia 976|Bacteroidetes M Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide vanX - 3.4.13.22 ko:K08641 ko01502,ko02020,map01502,map02020 M00651 - - ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504 - - - Peptidase_M15 WXD2_k127_4994677_5 665571.STHERM_c11070 3.08e-27 116.0 COG0782@1|root,COG1747@1|root,COG0782@2|Bacteria,COG1747@2|Bacteria,2J5MW@203691|Spirochaetes 203691|Spirochaetes K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides greA - - - - - - - - - - - GreA_GreB,GreA_GreB_N WXD2_k127_4994677_4 1382359.JIAL01000001_gene2414 1.251e-33 132.0 COG1146@1|root,COG1146@2|Bacteria,3Y59N@57723|Acidobacteria,2JJRG@204432|Acidobacteriia 204432|Acidobacteriia C 4Fe-4S dicluster domain - - - ko:K05524 - - - - ko00000 - - - Fer4,Fer4_4 WXD2_k127_4994677_1 397278.JOJN01000002_gene575 2.884e-142 469.0 COG0433@1|root,COG0433@2|Bacteria,2GM12@201174|Actinobacteria,4DNQR@85009|Propionibacteriales 201174|Actinobacteria M Bacterial protein of unknown function (DUF853) - - - ko:K06915 - - - - ko00000 - - - DUF853 WXD2_k127_4994677_3 869210.Marky_0691 4.511e-76 265.0 COG2084@1|root,COG2084@2|Bacteria,1WIBK@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus I PFAM NAD binding domain of 6-phosphogluconate dehydrogenase - - 1.1.1.31 ko:K00020 ko00280,ko01100,map00280,map01100 - R05066 RC00099 ko00000,ko00001,ko01000 - - - NAD_binding_11,NAD_binding_2 WXD2_k127_4994677_2 661478.OP10G_3531 1.258e-82 283.0 COG1028@1|root,COG1028@2|Bacteria 661478.OP10G_3531|- IQ oxidoreductase activity, acting on CH-OH group of donors - - 1.1.1.100 ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - - - WXD2_k127_4994677_0 1121920.AUAU01000012_gene2631 2.211e-182 607.0 COG1629@1|root,COG4771@2|Bacteria,3Y3ZU@57723|Acidobacteria 57723|Acidobacteria P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg,Plug,TonB_dep_Rec WXD2_k127_5018960_5 1120936.KB907208_gene786 1.146e-52 194.0 COG1091@1|root,COG1091@2|Bacteria,2GNY8@201174|Actinobacteria,4EH37@85012|Streptosporangiales 201174|Actinobacteria M RmlD substrate binding domain rmlD GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008831,GO:0009058,GO:0009059,GO:0009225,GO:0009226,GO:0009987,GO:0016051,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019305,GO:0019438,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0045226,GO:0046379,GO:0046383,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901576 1.1.1.133 ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R02777 RC00182 ko00000,ko00001,ko00002,ko01000 - - - RmlD_sub_bind WXD2_k127_5018960_13 1123371.ATXH01000013_gene1507 7.678e-11 66.0 COG1826@1|root,COG1826@2|Bacteria,2GIP7@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria U mttA/Hcf106 family - - - ko:K03116 ko03060,ko03070,map03060,map03070 M00336 - - ko00000,ko00001,ko00002,ko02044 2.A.64 - - MttA_Hcf106 WXD2_k127_5018960_0 555079.Toce_1758 4.533e-189 617.0 COG0210@1|root,COG0210@2|Bacteria,1TPSU@1239|Firmicutes,247RM@186801|Clostridia,42EUR@68295|Thermoanaerobacterales 186801|Clostridia L PFAM UvrD REP helicase pcrA - 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - UvrD-helicase,UvrD_C WXD2_k127_5018960_11 378806.STAUR_5412 1.704e-17 97.0 COG0457@1|root,COG3063@1|root,COG0457@2|Bacteria,COG3063@2|Bacteria,1MYB8@1224|Proteobacteria,42P5H@68525|delta/epsilon subdivisions,2WKAU@28221|Deltaproteobacteria,2YXRH@29|Myxococcales 28221|Deltaproteobacteria NU Tetratricopeptide repeat - - - - - - - - - - - - TPR_14,TPR_16,TPR_19,TPR_2,TPR_4,TPR_6,TPR_7,TPR_8 WXD2_k127_5018960_2 1121920.AUAU01000004_gene638 9.534e-121 393.0 COG1250@1|root,COG1250@2|Bacteria,3Y3S5@57723|Acidobacteria 57723|Acidobacteria I 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain - - 1.1.1.157 ko:K00074 ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120 - R01976,R05576,R06941 RC00029,RC00117 ko00000,ko00001,ko01000 - - - 3HCDH,3HCDH_N WXD2_k127_5018960_12 335543.Sfum_3109 3.098e-13 82.0 COG0642@1|root,COG2770@1|root,COG2205@2|Bacteria,COG2770@2|Bacteria,1N17V@1224|Proteobacteria,42PVC@68525|delta/epsilon subdivisions,2WKU9@28221|Deltaproteobacteria 28221|Deltaproteobacteria T Histidine kinase - - - - - - - - - - - - HAMP,HATPase_c,HisKA WXD2_k127_5018960_10 1160707.AJIK01000033_gene1510 1.338e-17 97.0 COG2340@1|root,COG2340@2|Bacteria,1V6GZ@1239|Firmicutes,4HJ21@91061|Bacilli,26FCB@186818|Planococcaceae 91061|Bacilli S Cysteine-rich secretory protein family ykwD - - - - - - - - - - - CAP WXD2_k127_5018960_1 518766.Rmar_1680 6.722e-138 449.0 COG0476@1|root,COG0607@1|root,COG0476@2|Bacteria,COG0607@2|Bacteria,4NFUD@976|Bacteroidetes,1FIWE@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes HP ThiF family moeZ - 2.7.7.80,2.8.1.11 ko:K21029,ko:K21147 ko04122,map04122 - R07459,R07461 RC00043 ko00000,ko00001,ko01000 - - - Rhodanese,ThiF WXD2_k127_5018960_7 1158318.ATXC01000001_gene854 9.181e-30 126.0 COG1610@1|root,COG1610@2|Bacteria,2G4V2@200783|Aquificae 200783|Aquificae S Yqey-like protein - - - ko:K09117 - - - - ko00000 - - - YqeY WXD2_k127_5018960_4 771875.Ferpe_0842 2.961e-54 196.0 COG0461@1|root,COG0461@2|Bacteria,2GD2M@200918|Thermotogae 200918|Thermotogae F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) pyrE - 2.4.2.10 ko:K00762 ko00240,ko01100,map00240,map01100 M00051 R01870 RC00611 ko00000,ko00001,ko00002,ko01000 - - - Pribosyltran WXD2_k127_5018960_9 1390370.O203_10210 8.359e-19 100.0 COG4770@1|root,COG4770@2|Bacteria,1P6RE@1224|Proteobacteria,1RM95@1236|Gammaproteobacteria,1YIVD@136841|Pseudomonas aeruginosa group 1236|Gammaproteobacteria I Pfam:CPSase_L_chain mccA - 6.4.1.4 ko:K01968 ko00280,ko01100,map00280,map01100 M00036 R04138 RC00367,RC00942 ko00000,ko00001,ko00002,ko01000 - - - Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2 WXD2_k127_5018960_3 78245.Xaut_1854 2.116e-105 351.0 COG0119@1|root,COG0119@2|Bacteria,1MUMX@1224|Proteobacteria,2TT1R@28211|Alphaproteobacteria,3EZIH@335928|Xanthobacteraceae 28211|Alphaproteobacteria E HMGL-like hmgL - 4.1.3.4 ko:K01640 ko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146 M00036,M00088 R01360,R08090 RC00502,RC00503,RC01118,RC01946 ko00000,ko00001,ko00002,ko01000 - - - HMGL-like WXD2_k127_5018960_8 1121405.dsmv_3809 3.943e-19 97.0 COG0824@1|root,COG0824@2|Bacteria,1MZTU@1224|Proteobacteria,42WZM@68525|delta/epsilon subdivisions,2WT0J@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Thioesterase-like superfamily - - - ko:K07107 - - - - ko00000,ko01000 - - - 4HBT,4HBT_2 WXD2_k127_5018960_6 56107.Cylst_4497 3.626e-50 189.0 COG2912@1|root,COG2912@2|Bacteria,1G11S@1117|Cyanobacteria,1HJSM@1161|Nostocales 1117|Cyanobacteria S Transglutaminase-like superfamily - - - - - - - - - - - - TPR_9,Transglut_core2 WXD2_k127_5034294_2 497964.CfE428DRAFT_3118 2.551e-33 147.0 COG1028@1|root,COG1028@2|Bacteria 497964.CfE428DRAFT_3118|- IQ oxidoreductase activity, acting on CH-OH group of donors - - - - - - - - - - - - - WXD2_k127_5034294_3 1267535.KB906767_gene464 4.848e-06 55.0 COG1917@1|root,COG1917@2|Bacteria 2|Bacteria L Cupin 2, conserved barrel domain protein - - - - - - - - - - - - AraC_binding,Cupin_2 WXD2_k127_5034294_1 706587.Desti_2374 1.121e-97 350.0 COG2805@1|root,COG2805@2|Bacteria,1MU3J@1224|Proteobacteria,42M7F@68525|delta/epsilon subdivisions,2WIMF@28221|Deltaproteobacteria,2MQ3Y@213462|Syntrophobacterales 28221|Deltaproteobacteria NU PFAM Type II IV secretion system protein - - - ko:K02669 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - T2SSE WXD2_k127_5034294_0 1268237.G114_08647 1.53e-110 367.0 COG2805@1|root,COG2805@2|Bacteria,1MU3J@1224|Proteobacteria,1RN8G@1236|Gammaproteobacteria,1Y440@135624|Aeromonadales 135624|Aeromonadales NU Type II/IV secretion system protein - - - ko:K02669 - - - - ko00000,ko02035,ko02044 3.A.15.2 - - T2SSE WXD2_k127_503599_2 448385.sce2783 6.098e-37 146.0 COG1234@1|root,COG1234@2|Bacteria,1QU4B@1224|Proteobacteria,42SHU@68525|delta/epsilon subdivisions,2WPGG@28221|Deltaproteobacteria,2YWV3@29|Myxococcales 28221|Deltaproteobacteria S cAMP phosphodiesterases class-II - - 3.1.4.17 ko:K01120 ko00230,map00230 - R00191,R01234 RC00296 ko00000,ko00001,ko01000 - - - Lactamase_B_2,PDEase_II WXD2_k127_503599_0 404589.Anae109_1724 0.0 1804.0 COG1201@1|root,COG1201@2|Bacteria,1MUSW@1224|Proteobacteria,42Q75@68525|delta/epsilon subdivisions,2WMDY@28221|Deltaproteobacteria,2YU11@29|Myxococcales 28221|Deltaproteobacteria L DEAD DEAH box - - - ko:K03724 - - - - ko00000,ko01000,ko03400 - - - DEAD,DEAD_assoc,Helicase_C WXD2_k127_503599_1 404589.Anae109_1725 6.171e-92 311.0 COG0266@1|root,COG0266@2|Bacteria,1N1J5@1224|Proteobacteria,433TA@68525|delta/epsilon subdivisions,2X3D6@28221|Deltaproteobacteria,2YVHV@29|Myxococcales 28221|Deltaproteobacteria L Belongs to the FPG family - - 4.2.99.18 ko:K05522 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Fapy_DNA_glyco,H2TH,zf-FPG_IleRS WXD2_k127_5037298_6 208439.AJAP_35350 3.489e-08 61.0 COG1846@1|root,COG1846@2|Bacteria,2GJ6W@201174|Actinobacteria 201174|Actinobacteria K MarR family - - - - - - - - - - - - MarR_2 WXD2_k127_5037298_2 485916.Dtox_3933 7.68e-172 551.0 COG0148@1|root,COG0148@2|Bacteria,1TP2S@1239|Firmicutes,247TU@186801|Clostridia,2600A@186807|Peptococcaceae 186801|Clostridia G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis eno - 4.2.1.11 ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 M00001,M00002,M00003,M00346,M00394 R00658 RC00349 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 - - - Enolase_C,Enolase_N WXD2_k127_5037298_5 326423.RBAM_022860 3.091e-12 73.0 COG0607@1|root,COG0607@2|Bacteria,1VAI7@1239|Firmicutes,4HKCE@91061|Bacilli,1ZGZX@1386|Bacillus 91061|Bacilli P COG0607 Rhodanese-related sulfurtransferase yqhL - - - - - - - - - - - Rhodanese WXD2_k127_5037298_3 1121403.AUCV01000001_gene771 6.906e-69 247.0 COG0681@1|root,COG0681@2|Bacteria,1MXUF@1224|Proteobacteria,42NJE@68525|delta/epsilon subdivisions,2WKMA@28221|Deltaproteobacteria,2MIAI@213118|Desulfobacterales 28221|Deltaproteobacteria U Belongs to the peptidase S26 family lepB_2 - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24,Peptidase_S26 WXD2_k127_5037298_1 330214.NIDE3178 5.519e-172 552.0 COG0464@1|root,COG0464@2|Bacteria 2|Bacteria O ATPase activity - - - - - - - - - - - - AAA WXD2_k127_5037298_4 56110.Oscil6304_2071 2.571e-38 152.0 COG0302@1|root,COG0302@2|Bacteria,1G1K8@1117|Cyanobacteria,1H6ZD@1150|Oscillatoriales 1117|Cyanobacteria H GTP cyclohydrolase I folE GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 ko:K01495 ko00790,ko01100,map00790,map01100 M00126,M00841,M00842,M00843 R00428,R04639,R05046,R05048 RC00263,RC00294,RC00323,RC00945,RC01188 ko00000,ko00001,ko00002,ko01000 - - iECNA114_1301.folE,iJN678.folE GTP_cyclohydroI WXD2_k127_5037298_0 1444712.BN1013_02223 1.448e-207 664.0 COG1960@1|root,COG1960@2|Bacteria,2JFSS@204428|Chlamydiae 204428|Chlamydiae C Acyl-CoA dehydrogenase, N-terminal domain - - - - - - - - - - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N WXD2_k127_505347_6 880072.Desac_2878 1.529e-84 304.0 COG1173@1|root,COG1173@2|Bacteria,1MU26@1224|Proteobacteria,42MFP@68525|delta/epsilon subdivisions,2WJ47@28221|Deltaproteobacteria,2MQ6J@213462|Syntrophobacterales 28221|Deltaproteobacteria P PFAM Binding-protein-dependent transport system inner membrane component - - - ko:K02034 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - BPD_transp_1,OppC_N WXD2_k127_505347_8 667014.Thein_0118 1.704e-75 265.0 COG0601@1|root,COG0601@2|Bacteria,2GHD2@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria P PFAM binding-protein-dependent transport systems inner membrane component - - - ko:K02033 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - BPD_transp_1 WXD2_k127_505347_3 1121456.ATVA01000011_gene1845 2.644e-94 334.0 COG0747@1|root,COG0747@2|Bacteria,1MUZH@1224|Proteobacteria,42MFK@68525|delta/epsilon subdivisions,2WKBU@28221|Deltaproteobacteria,2M7XJ@213115|Desulfovibrionales 28221|Deltaproteobacteria E extracellular solute-binding protein, family 5 - - - ko:K02035,ko:K13893 ko02010,ko02024,map02010,map02024 M00239,M00349 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.21,3.A.1.5.24 - - SBP_bac_5 WXD2_k127_505347_5 234267.Acid_0265 1.268e-84 307.0 COG3292@1|root,COG3292@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - DUF1906,VCBS WXD2_k127_505347_7 204669.Acid345_3562 7.588e-82 296.0 COG1044@1|root,COG1044@2|Bacteria,3Y2ZS@57723|Acidobacteria,2JIC3@204432|Acidobacteriia 204432|Acidobacteriia M SpoIVB peptidase S55 - - - - - - - - - - - - Peptidase_S55 WXD2_k127_505347_4 1382359.JIAL01000001_gene2865 3.273e-92 308.0 COG1136@1|root,COG1136@2|Bacteria,3Y30Q@57723|Acidobacteria,2JI7R@204432|Acidobacteriia 204432|Acidobacteriia V ABC transporter - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran WXD2_k127_505347_13 1304284.L21TH_2024 7.518e-08 63.0 2EJ6V@1|root,33CY2@2|Bacteria,1VPDN@1239|Firmicutes,24FI9@186801|Clostridia 186801|Clostridia S Yip1 domain - - - - - - - - - - - - Yip1 WXD2_k127_505347_9 1047013.AQSP01000138_gene1053 1.476e-63 242.0 COG1538@1|root,COG1538@2|Bacteria,2NP5D@2323|unclassified Bacteria 2|Bacteria MU Outer membrane efflux protein tolC - - ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 1.B.17,2.A.6.2 - - OEP WXD2_k127_505347_0 1121861.KB899930_gene199 6.723e-137 447.0 COG4608@1|root,COG4608@2|Bacteria,1NU4K@1224|Proteobacteria,2TQTV@28211|Alphaproteobacteria,2JPRD@204441|Rhodospirillales 204441|Rhodospirillales E Belongs to the ABC transporter superfamily - - - - - - - - - - - - ABC_tran,oligo_HPY WXD2_k127_505347_2 1038860.AXAP01000059_gene1460 5.456e-116 383.0 COG0444@1|root,COG0444@2|Bacteria,1R4KB@1224|Proteobacteria,2TR0J@28211|Alphaproteobacteria,3JSG0@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria EP Belongs to the ABC transporter superfamily MA20_22935 - - ko:K02031 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - ABC_tran,oligo_HPY WXD2_k127_505347_1 234267.Acid_1531 2.964e-135 452.0 COG0728@1|root,COG0728@2|Bacteria,3Y6N1@57723|Acidobacteria 57723|Acidobacteria S MviN-like protein - - - ko:K03980 - - - - ko00000,ko01011,ko02000 2.A.66.4 - - MVIN WXD2_k127_505347_11 1121930.AQXG01000045_gene2788 3.022e-53 202.0 COG0644@1|root,COG0644@2|Bacteria 2|Bacteria C geranylgeranyl reductase activity - - 1.14.19.49,1.3.1.101,1.3.7.11,5.5.1.18 ko:K06444,ko:K14257,ko:K17830 ko00253,ko00404,ko00564,ko00906,ko01057,ko01100,ko01110,ko01130,map00253,map00404,map00564,map00906,map01057,map01100,map01110,map01130 M00790,M00823 R05456,R06960,R06963,R07840,R10325,R10326,R10331,R11106,R11478 RC00949,RC01612,RC03134 ko00000,ko00001,ko00002,ko01000 - - - FAD_binding_3,Lycopene_cycl,NAD_binding_8,Pyr_redox_2,Trp_halogenase WXD2_k127_505347_12 265072.Mfla_1469 3.618e-50 201.0 COG1562@1|root,COG1562@2|Bacteria,1MX4W@1224|Proteobacteria,2VJ13@28216|Betaproteobacteria,2KKYA@206350|Nitrosomonadales 206350|Nitrosomonadales I TIGRFAM squalene synthase HpnD - - 2.5.1.32,2.5.1.99 ko:K02291 ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110 M00097 R02065,R04218,R07270,R10177 RC00362,RC01101,RC02869 ko00000,ko00001,ko00002,ko01000,ko01006 - - - SQS_PSY WXD2_k127_505347_10 1128421.JAGA01000001_gene2337 2.128e-63 222.0 COG0572@1|root,COG0572@2|Bacteria,2NPKT@2323|unclassified Bacteria 2|Bacteria F Phosphoribulokinase / Uridine kinase family udk GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.19,2.7.1.48 ko:K00855,ko:K00876 ko00240,ko00710,ko00983,ko01100,ko01120,ko01200,map00240,map00710,map00983,map01100,map01120,map01200 M00165,M00166 R00513,R00516,R00517,R00962,R00964,R00967,R00968,R00970,R01523,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - iSBO_1134.SBO_0893 PRK WXD2_k127_5059741_4 316067.Geob_0471 1.01e-13 84.0 COG0839@1|root,COG0839@2|Bacteria,1MWJV@1224|Proteobacteria,42V5H@68525|delta/epsilon subdivisions,2WQF4@28221|Deltaproteobacteria,43USM@69541|Desulfuromonadales 28221|Deltaproteobacteria C NADH-ubiquinone/plastoquinone oxidoreductase chain 6 nuoJ-1 - 1.6.5.3 ko:K00339 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q3 WXD2_k127_5059741_1 517418.Ctha_0603 2.577e-89 310.0 COG1005@1|root,COG1005@2|Bacteria,1FF0G@1090|Chlorobi 1090|Chlorobi C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone - - 1.6.5.3 ko:K00337 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - NADHdh WXD2_k127_5059741_0 671143.DAMO_1616 6.582e-112 380.0 COG1034@1|root,COG1034@2|Bacteria 2|Bacteria C ATP synthesis coupled electron transport nuoG - 1.6.5.3 ko:K00336 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Fer2_4,Molybdop_Fe4S4,Molybdopterin,NADH-G_4Fe-4S_3 WXD2_k127_5059741_3 1101192.KB910516_gene3266 2.09e-15 87.0 COG0760@1|root,COG0760@2|Bacteria,1MZDK@1224|Proteobacteria,2TVQD@28211|Alphaproteobacteria,1JQSQ@119045|Methylobacteriaceae 28211|Alphaproteobacteria M PFAM PpiC-type peptidyl-prolyl cis-trans isomerase ppiC - 5.2.1.8 ko:K01802,ko:K03769 - - - - ko00000,ko01000,ko03110 - - - Rotamase,Rotamase_3 WXD2_k127_5059741_2 903818.KI912268_gene1512 1.722e-34 135.0 COG0745@1|root,COG0745@2|Bacteria,3Y81M@57723|Acidobacteria 903818.KI912268_gene1512|- T cheY-homologous receiver domain - - - - - - - - - - - - - WXD2_k127_5064253_4 861299.J421_0322 8.03e-30 133.0 COG3509@1|root,COG3509@2|Bacteria 2|Bacteria Q xylan catabolic process lpqP - - ko:K03932 - - - - ko00000 - CE1 - Esterase_phd WXD2_k127_5064253_3 1210884.HG799468_gene13552 8.102e-54 209.0 2EQYW@1|root,33IIJ@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_5064253_0 1210884.HG799468_gene13553 1.643e-91 308.0 COG1131@1|root,COG1131@2|Bacteria,2IY79@203682|Planctomycetes 203682|Planctomycetes V ABC transporter - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran WXD2_k127_5064253_2 251221.35213668 1.274e-70 257.0 COG1680@1|root,COG1680@2|Bacteria,1G737@1117|Cyanobacteria 1117|Cyanobacteria V beta-lactamase - - - - - - - - - - - - Beta-lactamase WXD2_k127_5064253_5 1111730.ATTM01000002_gene1257 0.0001746 48.0 COG4980@1|root,COG4980@2|Bacteria,4NW56@976|Bacteroidetes,1IJ5I@117743|Flavobacteriia,2P0J3@237|Flavobacterium 976|Bacteroidetes S YtxH-like protein - - - - - - - - - - - - YtxH WXD2_k127_5064253_1 861299.J421_1374 5.402e-83 289.0 COG2423@1|root,COG2423@2|Bacteria 2|Bacteria E ornithine cyclodeaminase activity ocd2 - 1.4.1.1,1.5.1.25,4.3.1.12 ko:K01750,ko:K18258,ko:K19244 ko00250,ko00330,ko00430,ko01100,ko01110,ko01130,ko01230,map00250,map00330,map00430,map01100,map01110,map01130,map01230 - R00396,R00671 RC00008,RC00354 ko00000,ko00001,ko01000,ko04147 - - - OCD_Mu_crystall WXD2_k127_512851_6 383372.Rcas_3354 5.798e-15 86.0 COG4485@1|root,COG4485@2|Bacteria,2G75F@200795|Chloroflexi,3771H@32061|Chloroflexia 32061|Chloroflexia S Bacterial membrane protein YfhO - - - - - - - - - - - - YfhO WXD2_k127_512851_5 1449357.JQLK01000001_gene117 1.119e-20 102.0 COG1324@1|root,COG1324@2|Bacteria,1WKG6@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus P PFAM CutA1 divalent ion tolerance protein cutA - - ko:K03926 - - - - ko00000 - - - CutA1 WXD2_k127_512851_2 290315.Clim_2326 8.73e-54 201.0 COG0744@1|root,COG0744@2|Bacteria,1FDQX@1090|Chlorobi 1090|Chlorobi M Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors mtgA - 2.4.1.129 ko:K03814 ko00550,map00550 - - - ko00000,ko00001,ko01000,ko01003,ko01011 - GT51 - Transgly WXD2_k127_512851_4 596151.DesfrDRAFT_3055 3.752e-34 142.0 COG0741@1|root,COG0741@2|Bacteria,1MZ4X@1224|Proteobacteria,42TVX@68525|delta/epsilon subdivisions,2WP4F@28221|Deltaproteobacteria,2MG7G@213115|Desulfovibrionales 28221|Deltaproteobacteria M Transglycosylase SLT domain - - - ko:K08309 - - - - ko00000,ko01000,ko01011 - GH23 - DUF4124,SLT WXD2_k127_512851_0 1254432.SCE1572_02705 7.009e-83 301.0 COG0642@1|root,COG2205@2|Bacteria,1NRP8@1224|Proteobacteria,42Z45@68525|delta/epsilon subdivisions,2WTWB@28221|Deltaproteobacteria,2YW9J@29|Myxococcales 28221|Deltaproteobacteria T Histidine kinase - - - - - - - - - - - - GAF,GAF_2,GAF_3,HAMP,HATPase_c,HisKA WXD2_k127_512851_3 913865.DOT_1371 8.503e-39 154.0 COG0637@1|root,COG0637@2|Bacteria,1UW2W@1239|Firmicutes,25M3W@186801|Clostridia,2664X@186807|Peptococcaceae 186801|Clostridia S Haloacid dehalogenase-like hydrolase - - - - - - - - - - - - HAD_2 WXD2_k127_512851_1 80637.XP_007768659.1 8.514e-66 235.0 COG1804@1|root,KOG3957@2759|Eukaryota,38CWZ@33154|Opisthokonta,3NU4P@4751|Fungi,3UXUJ@5204|Basidiomycota,225J4@155619|Agaricomycetes 4751|Fungi I CAIB BAIF family enzyme - - 2.8.3.13 ko:K18703 - - - - ko00000,ko01000 - - - CoA_transf_3 WXD2_k127_515961_0 760192.Halhy_3357 3.121e-155 504.0 COG0160@1|root,COG0160@2|Bacteria,4NIHH@976|Bacteroidetes,1IWIQ@117747|Sphingobacteriia 976|Bacteroidetes E COGs COG0160 4-aminobutyrate aminotransferase and related aminotransferase - - 2.6.1.19,2.6.1.22 ko:K00823,ko:K07250 ko00250,ko00280,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00280,map00410,map00640,map00650,map01100,map01120 M00027 R00908,R01648,R04188 RC00006,RC00062,RC00160 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_3 WXD2_k127_515961_1 1366046.HIMB11_03236 1.493e-118 392.0 COG0167@1|root,COG0167@2|Bacteria,1MXER@1224|Proteobacteria,2TSPK@28211|Alphaproteobacteria,3ZG0A@58840|unclassified Rhodobacteraceae 28211|Alphaproteobacteria C Dihydroorotate dehydrogenase preA GO:0003674,GO:0003824,GO:0003954,GO:0006139,GO:0006206,GO:0006208,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016491,GO:0016651,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 1.3.1.1 ko:K17723 ko00240,ko00410,ko00770,ko01100,map00240,map00410,map00770,map01100 M00046 R00977,R01414,R11026 RC00072,RC00123 ko00000,ko00001,ko00002,ko01000 - - - DHO_dh,Fer4_21,Fer4_4,Fer4_6 WXD2_k127_515961_2 2045.KR76_17370 4.04e-48 199.0 COG2304@1|root,COG2931@1|root,COG3210@1|root,COG2304@2|Bacteria,COG2931@2|Bacteria,COG3210@2|Bacteria,2GR03@201174|Actinobacteria,4DS73@85009|Propionibacteriales 201174|Actinobacteria Q domain, Protein - - - - - - - - - - - - HemolysinCabind WXD2_k127_51862_3 298653.Franean1_5367 1.566e-07 62.0 COG3654@1|root,COG3654@2|Bacteria,2IR34@201174|Actinobacteria,4ET91@85013|Frankiales 201174|Actinobacteria S Fic/DOC family doc - - ko:K07341 - - - - ko00000,ko02048 - - - Fic WXD2_k127_51862_0 861299.J421_2858 3.233e-93 318.0 COG3108@1|root,COG3108@2|Bacteria,1ZTME@142182|Gemmatimonadetes 142182|Gemmatimonadetes S Peptidase M15 - - - - - - - - - - - - Peptidase_M15_3 WXD2_k127_51862_2 1382359.JIAL01000001_gene564 2.49e-17 96.0 COG2304@1|root,COG2304@2|Bacteria,3Y2PC@57723|Acidobacteria,2JI8N@204432|Acidobacteriia 204432|Acidobacteriia S von Willebrand factor, type A - - - - - - - - - - - - VWA,VWA_2 WXD2_k127_524704_2 290397.Adeh_0144 4.006e-10 64.0 COG0745@1|root,COG0745@2|Bacteria 290397.Adeh_0144|- T phosphorelay signal transduction system - - - - - - - - - - - - - WXD2_k127_524704_1 404589.Anae109_1185 5.818e-114 382.0 COG1158@1|root,COG1158@2|Bacteria,1MUCF@1224|Proteobacteria,42M15@68525|delta/epsilon subdivisions,2WIQN@28221|Deltaproteobacteria 28221|Deltaproteobacteria K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template - - - ko:K03628 ko03018,map03018 - - - ko00000,ko00001,ko03019,ko03021 - - - ATP-synt_ab,Rho_RNA_bind WXD2_k127_524704_0 1356852.N008_04055 4.515e-123 415.0 COG1629@1|root,COG4771@2|Bacteria,4NF66@976|Bacteroidetes,47JMC@768503|Cytophagia 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg,Plug,TonB_dep_Rec WXD2_k127_531246_0 1242864.D187_000143 9.689e-173 563.0 COG1793@1|root,COG3285@1|root,COG1793@2|Bacteria,COG3285@2|Bacteria,1MVWY@1224|Proteobacteria,42NN9@68525|delta/epsilon subdivisions,2WM5V@28221|Deltaproteobacteria,2Z32B@29|Myxococcales 28221|Deltaproteobacteria L DNA polymerase Ligase (LigD) ligD - 6.5.1.1 ko:K01971 ko03450,map03450 - R00381 RC00005 ko00000,ko00001,ko01000,ko03400 - - - DNA_ligase_A_C,DNA_ligase_A_M,LigD_N WXD2_k127_531246_3 62928.azo0383 4.608e-53 197.0 COG4221@1|root,COG4221@2|Bacteria,1QTVZ@1224|Proteobacteria,2WGPF@28216|Betaproteobacteria,2KZNP@206389|Rhodocyclales 206389|Rhodocyclales S KR domain - - - - - - - - - - - - adh_short WXD2_k127_531246_5 290397.Adeh_4019 4.581e-31 138.0 COG2050@1|root,COG2050@2|Bacteria,1RKGI@1224|Proteobacteria,42WI1@68525|delta/epsilon subdivisions,2WSAN@28221|Deltaproteobacteria 28221|Deltaproteobacteria Q Domain of unknown function (DUF4442) - - - - - - - - - - - - DUF4442 WXD2_k127_531246_2 204669.Acid345_0353 4.852e-92 320.0 COG0491@1|root,COG0491@2|Bacteria,3Y54H@57723|Acidobacteria,2JM9F@204432|Acidobacteriia 204432|Acidobacteriia S Metallo-beta-lactamase superfamily - - - - - - - - - - - - Lactamase_B WXD2_k127_531246_4 398767.Glov_1844 4.153e-50 193.0 COG2199@1|root,COG3706@2|Bacteria,1R7HC@1224|Proteobacteria,42Q7A@68525|delta/epsilon subdivisions,2WM81@28221|Deltaproteobacteria 28221|Deltaproteobacteria T GAF domain - - - - - - - - - - - - GAF,GGDEF WXD2_k127_531246_1 1242864.D187_004919 3.692e-108 355.0 COG0174@1|root,COG0174@2|Bacteria,1NZU7@1224|Proteobacteria 1224|Proteobacteria E glutamine synthetase glnII - 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 - R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 - - - Gln-synt_C,Gln-synt_N WXD2_k127_532381_5 319236.JCM19294_1404 9.617e-10 66.0 2CRMH@1|root,32SPB@2|Bacteria,4NTBB@976|Bacteroidetes,1I47V@117743|Flavobacteriia,3HKKD@363408|Nonlabens 976|Bacteroidetes - - - - - - - - - - - - - - DUF1569,DinB_2 WXD2_k127_532381_1 502025.Hoch_2041 3.329e-99 356.0 COG0457@1|root,COG0515@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,1MV1P@1224|Proteobacteria,42Q67@68525|delta/epsilon subdivisions,2WKZ1@28221|Deltaproteobacteria 68525|delta/epsilon subdivisions KLT serine threonine protein kinase - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase WXD2_k127_532381_6 378806.STAUR_1520 0.0002396 53.0 COG1572@1|root,COG1572@2|Bacteria,1QX4M@1224|Proteobacteria 1224|Proteobacteria S Parallel beta-helix repeats - - - - - - - - - - - - CARDB,F5_F8_type_C WXD2_k127_532381_2 404589.Anae109_0549 6.569e-75 266.0 COG3291@1|root,COG3291@2|Bacteria,1NE5Q@1224|Proteobacteria,433YB@68525|delta/epsilon subdivisions,2X423@28221|Deltaproteobacteria,2YY0M@29|Myxococcales 28221|Deltaproteobacteria S Pregnancy-associated plasma protein-A - - - - - - - - - - - - Peptidase_M43 WXD2_k127_532381_4 1300345.LF41_847 5.864e-21 107.0 2C8CD@1|root,2Z9AD@2|Bacteria,1N17D@1224|Proteobacteria,1RRIP@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_532381_3 420662.Mpe_A0215 3.247e-46 173.0 COG3794@1|root,COG3794@2|Bacteria,1RHQU@1224|Proteobacteria,2VSJJ@28216|Betaproteobacteria,1KM37@119065|unclassified Burkholderiales 28216|Betaproteobacteria C PFAM blue (type 1) copper domain protein - - - - - - - - - - - - - WXD2_k127_532381_0 1121015.N789_01640 2.305e-191 622.0 COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,1RM8A@1236|Gammaproteobacteria,1X2Z4@135614|Xanthomonadales 135614|Xanthomonadales T phosphodiesterase - - - - - - - - - - - - EAL,GGDEF,HAMP,dCache_3 WXD2_k127_543836_1 861299.J421_1845 9.019e-64 231.0 COG1858@1|root,COG1858@2|Bacteria,1ZV0F@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Di-haem cytochrome c peroxidase - - 1.11.1.5 ko:K00428 - - - - ko00000,ko01000 - - - CCP_MauG,Cytochrom_C WXD2_k127_543836_2 1320556.AVBP01000019_gene1241 7.807e-28 118.0 2E4GK@1|root,32ZBS@2|Bacteria,1N72D@1224|Proteobacteria,2UGDA@28211|Alphaproteobacteria,43KNQ@69277|Phyllobacteriaceae 28211|Alphaproteobacteria S YtkA-like - - - - - - - - - - - - YtkA WXD2_k127_543836_0 1242864.D187_006772 4.983e-82 285.0 COG0111@1|root,COG0111@2|Bacteria,1MW1U@1224|Proteobacteria,43777@68525|delta/epsilon subdivisions,2X9UJ@28221|Deltaproteobacteria,2Z0XS@29|Myxococcales 28221|Deltaproteobacteria EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - - - - - - - - - - 2-Hacid_dh_C WXD2_k127_559219_2 1232437.KL662006_gene4388 6.997e-38 145.0 2C477@1|root,32RDF@2|Bacteria,1RKW1@1224|Proteobacteria,42SWN@68525|delta/epsilon subdivisions,2WP88@28221|Deltaproteobacteria 28221|Deltaproteobacteria S DGC domain - - - - - - - - - - - - DGC WXD2_k127_559219_0 234267.Acid_5065 5.532e-171 567.0 COG1674@1|root,COG1674@2|Bacteria,3Y3CJ@57723|Acidobacteria 57723|Acidobacteria D PFAM cell divisionFtsK SpoIIIE - - - ko:K03466 - - - - ko00000,ko03036 3.A.12 - - FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma WXD2_k127_559219_1 56107.Cylst_0633 2.159e-75 259.0 COG2304@1|root,COG2304@2|Bacteria,1G3PE@1117|Cyanobacteria,1HKB6@1161|Nostocales 1117|Cyanobacteria S protein containing a von Willebrand factor type A (vWA) domain - - - ko:K07114 - - - - ko00000,ko02000 1.A.13.2.2,1.A.13.2.3 - - DUF3520,VWA,vWF_A WXD2_k127_566190_1 1265502.KB905943_gene2723 1.268e-61 237.0 COG0515@1|root,COG0515@2|Bacteria,1MV1P@1224|Proteobacteria,2VKJ8@28216|Betaproteobacteria,4AD1S@80864|Comamonadaceae 28216|Betaproteobacteria KLT Protein tyrosine kinase - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PEGA,Pkinase WXD2_k127_566190_0 1499967.BAYZ01000184_gene4567 3.935e-238 756.0 COG0480@1|root,COG0480@2|Bacteria,2NNQD@2323|unclassified Bacteria 2|Bacteria J elongation factor G fusA-1 - - ko:K02355 - - - - ko00000,ko03012,ko03029 - - - EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2 WXD2_k127_569301_4 997346.HMPREF9374_3336 7.805e-29 124.0 COG4323@1|root,COG4323@2|Bacteria,1VAER@1239|Firmicutes,4HKDS@91061|Bacilli 91061|Bacilli S Protein of unknown function (DUF962) - - - - - - - - - - - - DUF962 WXD2_k127_569301_2 1382306.JNIM01000001_gene4148 2.301e-88 305.0 COG0623@1|root,COG0623@2|Bacteria,2G6ED@200795|Chloroflexi 200795|Chloroflexi I Enoyl- acyl-carrier-protein reductase NADH fabI - 1.3.1.10,1.3.1.9 ko:K00208 ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212 M00083,M00572 R01404,R04429,R04430,R04724,R04725,R04955,R04956,R04958,R04959,R04961,R04962,R04966,R04967,R04969,R04970,R07765,R10118,R10122,R11671 RC00052,RC00076,RC00120 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short_C2 WXD2_k127_569301_0 1089553.Tph_c17650 5.401e-125 415.0 COG0008@1|root,COG1384@1|root,COG0008@2|Bacteria,COG1384@2|Bacteria,1TPJC@1239|Firmicutes,2482P@186801|Clostridia,42ETH@68295|Thermoanaerobacterales 186801|Clostridia J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) gltX - 6.1.1.17 ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 M00121,M00359,M00360 R05578 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 - - - tRNA-synt_1c WXD2_k127_569301_5 1121920.AUAU01000019_gene2604 1.149e-24 113.0 COG4659@1|root,COG4659@2|Bacteria 2|Bacteria C FMN binding rnfG GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - ko:K03612 - - - - ko00000 - - - FMN_bind WXD2_k127_569301_1 857087.Metme_0581 5.807e-107 361.0 COG2433@1|root,COG2433@2|Bacteria,1QW3W@1224|Proteobacteria,1T2RV@1236|Gammaproteobacteria,1XENI@135618|Methylococcales 135618|Methylococcales S Pfam Transposase IS66 - - - - - - - - - - - - - WXD2_k127_569301_3 1121920.AUAU01000019_gene2602 8.85e-48 185.0 COG1477@1|root,COG1477@2|Bacteria,3Y4B0@57723|Acidobacteria 57723|Acidobacteria H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein - - 2.7.1.180 ko:K03734 - - - - ko00000,ko01000 - - - ApbE WXD2_k127_569301_7 1424334.W822_08950 3.744e-07 58.0 COG0672@1|root,COG0672@2|Bacteria,1MXHM@1224|Proteobacteria,2WF1G@28216|Betaproteobacteria,3T9DB@506|Alcaligenaceae 28216|Betaproteobacteria P Iron permease FTR1 family efeU - - ko:K07243 - - - - ko00000,ko02000 2.A.108.1,2.A.108.2 - - Cytochrome_CBB3,FTR1 WXD2_k127_571166_2 204669.Acid345_0471 3.909e-46 171.0 COG0484@1|root,COG0484@2|Bacteria 2|Bacteria O heat shock protein binding - - - - - - - - - - - - - WXD2_k127_571166_1 861299.J421_3658 3.655e-75 283.0 COG0515@1|root,COG0515@2|Bacteria 861299.J421_3658|- KLT protein kinase activity - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - - WXD2_k127_571166_3 204669.Acid345_0518 2.347e-36 145.0 COG3794@1|root,COG3794@2|Bacteria,3Y4UD@57723|Acidobacteria,2JJH0@204432|Acidobacteriia 204432|Acidobacteriia C PFAM blue (type 1) copper domain protein - - - - - - - - - - - - - WXD2_k127_571166_0 880073.Calab_0069 1.262e-171 546.0 COG1960@1|root,COG1960@2|Bacteria,2NNRN@2323|unclassified Bacteria 2|Bacteria I Dehydrogenase acdA - 1.3.8.1,1.3.99.12 ko:K00248,ko:K09478 ko00071,ko00280,ko00650,ko01100,ko01110,ko01120,ko01200,ko01212,map00071,map00280,map00650,map01100,map01110,map01120,map01200,map01212 - R01175,R01178,R02661,R03172,R04751 RC00052,RC00068,RC00076,RC00120,RC00148 ko00000,ko00001,ko01000 - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N WXD2_k127_571944_2 1278073.MYSTI_06128 9.613e-05 48.0 COG4531@1|root,COG4531@2|Bacteria,1REHQ@1224|Proteobacteria,42TZ1@68525|delta/epsilon subdivisions,2WQ6N@28221|Deltaproteobacteria 28221|Deltaproteobacteria P ABC-type Zn2 transport system, periplasmic component surface adhesin - - - - - - - - - - - - - WXD2_k127_571944_1 1267535.KB906767_gene3879 2.189e-51 192.0 COG2846@1|root,COG2846@2|Bacteria,3Y4SU@57723|Acidobacteria,2JMU3@204432|Acidobacteriia 204432|Acidobacteriia D Domain of Unknown function (DUF542) - - - ko:K07322 - - - - ko00000 - - - Hemerythrin,ScdA_N WXD2_k127_571944_0 448385.sce3213 1.827e-68 242.0 COG1073@1|root,COG1073@2|Bacteria,1MZUA@1224|Proteobacteria,431FI@68525|delta/epsilon subdivisions,2WX1E@28221|Deltaproteobacteria,2YV8K@29|Myxococcales 28221|Deltaproteobacteria S Serine aminopeptidase, S33 - - - - - - - - - - - - Abhydrolase_6 WXD2_k127_586278_2 684719.HIMB114_00006060 1.767e-53 194.0 COG1034@1|root,COG1034@2|Bacteria,1P8MN@1224|Proteobacteria,2TS97@28211|Alphaproteobacteria,4BPQC@82117|unclassified Alphaproteobacteria 28211|Alphaproteobacteria C TIGRFAM NADH-quinone oxidoreductase, chain G nuoG - 1.6.5.3 ko:K00336 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Fer2_4,Molybdopterin,NADH-G_4Fe-4S_3,NADH_dhqG_C WXD2_k127_586278_6 639283.Snov_2789 2.452e-20 102.0 COG0760@1|root,COG0760@2|Bacteria,1MZDK@1224|Proteobacteria,2TVQD@28211|Alphaproteobacteria,3EZ6E@335928|Xanthobacteraceae 28211|Alphaproteobacteria O PPIC-type PPIASE domain ppiC - 5.2.1.8 ko:K01802,ko:K03769 - - - - ko00000,ko01000,ko03110 - - - Rotamase,Rotamase_3 WXD2_k127_586278_4 247490.KSU1_C0339 4.239e-30 128.0 COG0745@1|root,COG0745@2|Bacteria,2J0FN@203682|Planctomycetes 203682|Planctomycetes KT cheY-homologous receiver domain - - - - - - - - - - - - Response_reg WXD2_k127_586278_0 1379698.RBG1_1C00001G0675 1.788e-98 335.0 COG1748@1|root,COG1748@2|Bacteria,2NPF8@2323|unclassified Bacteria 2|Bacteria E Saccharopine dehydrogenase C-terminal domain lysDH - 1.4.1.18 ko:K19064 ko00960,ko01100,ko01110,map00960,map01100,map01110 - R00446,R02317 RC00062,RC00694 ko00000,ko00001,ko01000 - - - ELFV_dehydrog,Sacchrp_dh_C,Sacchrp_dh_NADP WXD2_k127_586278_7 1198114.AciX9_0172 4.645e-11 68.0 COG1366@1|root,COG1366@2|Bacteria,3Y4U6@57723|Acidobacteria,2JJH2@204432|Acidobacteriia 204432|Acidobacteriia T Belongs to the anti-sigma-factor antagonist family - - - ko:K04749 - - - - ko00000,ko03021 - - - STAS WXD2_k127_586278_5 401053.AciPR4_2476 2.069e-28 119.0 COG0838@1|root,COG0838@2|Bacteria,3Y4SD@57723|Acidobacteria,2JJ78@204432|Acidobacteriia 204432|Acidobacteriia C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoA - 1.6.5.3 ko:K00330 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q4 WXD2_k127_586278_3 118005.AWNK01000006_gene1203 2.028e-38 156.0 COG1905@1|root,COG1905@2|Bacteria 2|Bacteria C 2 iron, 2 sulfur cluster binding nuoE - 1.6.5.3 ko:K00334,ko:K00335 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - 2Fe-2S_thioredx WXD2_k127_586278_1 886293.Sinac_2283 5.293e-92 308.0 COG1894@1|root,COG1894@2|Bacteria,2IXJ8@203682|Planctomycetes 203682|Planctomycetes C NADH-ubiquinone oxidoreductase-F iron-sulfur binding region - - 1.6.5.3 ko:K00335 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Complex1_51K,NADH_4Fe-4S,SLBB WXD2_k127_58716_1 880071.Fleli_2547 2.246e-05 53.0 COG3678@1|root,COG3678@2|Bacteria 2|Bacteria NPTU ATP-independent chaperone mediated protein folding - - - ko:K02005 - - - - ko00000 - - - HlyD_D23,LTXXQ WXD2_k127_58716_0 111780.Sta7437_2551 9.113e-06 59.0 COG0457@1|root,COG0457@2|Bacteria,1G20P@1117|Cyanobacteria,3VJQ2@52604|Pleurocapsales 1117|Cyanobacteria O PFAM Tetratricopeptide repeat - - - - - - - - - - - - TPR_1,TPR_11,TPR_16,TPR_2,TPR_8 WXD2_k127_597122_2 234267.Acid_6580 1.599e-84 285.0 COG1028@1|root,COG1028@2|Bacteria,3Y3YM@57723|Acidobacteria 234267.Acid_6580|- IQ Short-chain dehydrogenase reductase SDR - - 1.1.1.100 ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - - - WXD2_k127_597122_0 1121920.AUAU01000008_gene1537 1.327e-150 482.0 COG0332@1|root,COG0332@2|Bacteria,3Y2Z5@57723|Acidobacteria 57723|Acidobacteria I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids - - - - - - - - - - - - ACP_syn_III,ACP_syn_III_C WXD2_k127_597122_3 1283283.ATXA01000007_gene3858 1.712e-29 131.0 COG2267@1|root,COG2267@2|Bacteria,2GJ78@201174|Actinobacteria,4EREY@85013|Frankiales 201174|Actinobacteria I PFAM Alpha beta hydrolase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - - - - - - - - - - Abhydrolase_1 WXD2_k127_597122_1 1382306.JNIM01000001_gene3093 1.087e-136 452.0 COG0318@1|root,COG0318@2|Bacteria,2G5K4@200795|Chloroflexi 200795|Chloroflexi IQ PFAM AMP-dependent synthetase and ligase - - - ko:K00666 - - - - ko00000,ko01000,ko01004 - - - AMP-binding,AMP-binding_C WXD2_k127_597122_4 658086.HMPREF0994_04429 6.602e-10 71.0 COG1309@1|root,COG1309@2|Bacteria,1VDNV@1239|Firmicutes,24S9R@186801|Clostridia 186801|Clostridia K Bacterial regulatory proteins, tetR family - - - - - - - - - - - - TetR_N WXD2_k127_601089_2 439375.Oant_1807 3.671e-58 208.0 COG1171@1|root,COG1171@2|Bacteria,1MVWJ@1224|Proteobacteria,2TQN9@28211|Alphaproteobacteria,1J3CT@118882|Brucellaceae 28211|Alphaproteobacteria E Pyridoxal-phosphate dependent enzyme - - 4.3.1.19 ko:K01754 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230 M00570 R00220,R00996 RC00418,RC02600 ko00000,ko00001,ko00002,ko01000 - - - PALP WXD2_k127_601089_0 1211844.CBLM010000026_gene2210 1.466e-142 465.0 COG2256@1|root,COG2256@2|Bacteria,1TPVV@1239|Firmicutes,3VP17@526524|Erysipelotrichia 526524|Erysipelotrichia L Psort location Cytoplasmic, score 8.87 - - - - - - - - - - - - AAA,AAA_assoc_2,MgsA_C,RuvB_N WXD2_k127_601089_4 391625.PPSIR1_04398 3.483e-30 123.0 COG1607@1|root,COG1607@2|Bacteria,1MZAZ@1224|Proteobacteria,42RJS@68525|delta/epsilon subdivisions,2WQSB@28221|Deltaproteobacteria 28221|Deltaproteobacteria I Thioesterase superfamily yciA - - ko:K10806 ko01040,map01040 - - - ko00000,ko00001,ko01000,ko01004 - - - 4HBT WXD2_k127_601089_1 1123368.AUIS01000004_gene153 3.619e-62 238.0 COG0760@1|root,COG0760@2|Bacteria,1MWV0@1224|Proteobacteria,1RMT5@1236|Gammaproteobacteria,2NCJU@225057|Acidithiobacillales 225057|Acidithiobacillales O SurA N-terminal domain - - 5.2.1.8 ko:K03770 - - - - ko00000,ko01000,ko03110 - - - Rotamase_2,SurA_N_3 WXD2_k127_601089_5 443144.GM21_1523 5.096e-13 81.0 COG4254@1|root,COG4254@2|Bacteria 2|Bacteria UW PFAM FecR protein - - - - - - - - - - - - Big_2,FecR,LysM,fn3 WXD2_k127_601089_3 926566.Terro_3275 2.965e-55 214.0 COG1077@1|root,COG1077@2|Bacteria,3Y3VC@57723|Acidobacteria,2JHQ2@204432|Acidobacteriia 204432|Acidobacteriia D cell shape determining protein MreB - - - ko:K03569 - - - - ko00000,ko02048,ko03036,ko04812 1.A.33.1,9.B.157.1 - - MreB_Mbl WXD2_k127_602925_1 756272.Plabr_4030 5.063e-44 169.0 COG2318@1|root,COG2318@2|Bacteria 2|Bacteria S DinB family ywlC1 - - - - - - - - - - - DinB_2 WXD2_k127_602925_2 426716.JOAJ01000012_gene6669 0.0009117 51.0 COG3468@1|root,COG3468@2|Bacteria,2HCJX@201174|Actinobacteria,4FW2W@85025|Nocardiaceae 201174|Actinobacteria MU IPT/TIG domain - - - - - - - - - - - - TIG WXD2_k127_602925_0 234267.Acid_1884 9.317e-48 174.0 COG5649@1|root,COG5649@2|Bacteria,3Y4QH@57723|Acidobacteria 57723|Acidobacteria S Domain of unknown function (DU1801) - - - - - - - - - - - - DUF1801 WXD2_k127_604524_1 404589.Anae109_3113 3.856e-36 141.0 COG1942@1|root,COG1942@2|Bacteria,1RHA5@1224|Proteobacteria,431G6@68525|delta/epsilon subdivisions,2WWH2@28221|Deltaproteobacteria 28221|Deltaproteobacteria S Tautomerase enzyme - - - - - - - - - - - - Tautomerase_2 WXD2_k127_604524_2 1336235.JAEG01000006_gene665 7.442e-28 125.0 COG1409@1|root,COG1409@2|Bacteria,1NXRI@1224|Proteobacteria,2U1WZ@28211|Alphaproteobacteria 28211|Alphaproteobacteria S Calcineurin-like phosphoesterase - - 3.1.3.2 ko:K14379 ko00740,ko01100,ko04142,ko04380,ko05323,map00740,map01100,map04142,map04380,map05323 - R00548 RC00017 ko00000,ko00001,ko01000 - - - Metallophos WXD2_k127_604524_0 234267.Acid_6470 5.862e-92 332.0 COG4775@1|root,COG4775@2|Bacteria,3Y2Q9@57723|Acidobacteria 57723|Acidobacteria M Surface antigen variable number - - - ko:K07277 - - - - ko00000,ko02000,ko03029 1.B.33 - - Bac_surface_Ag,POTRA WXD2_k127_604524_3 768670.Calni_0301 2.211e-13 79.0 COG2825@1|root,COG2825@2|Bacteria,2GFRM@200930|Deferribacteres 200930|Deferribacteres M Outer membrane protein (OmpH-like) - - - ko:K06142 - - - - ko00000 - - - OmpH WXD2_k127_614388_0 235909.GK0282 1.499e-88 300.0 COG0154@1|root,COG0154@2|Bacteria,1TP0C@1239|Firmicutes,4HBAZ@91061|Bacilli,1WEDB@129337|Geobacillus 91061|Bacilli J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) gatA - 6.3.5.6,6.3.5.7 ko:K02433 ko00970,ko01100,map00970,map01100 - R03905,R04212 RC00010 ko00000,ko00001,ko01000,ko03029 - - - Amidase WXD2_k127_614388_1 903818.KI912269_gene470 3.198e-80 295.0 COG0860@1|root,COG0860@2|Bacteria 2|Bacteria M N-Acetylmuramoyl-L-alanine amidase - - 3.5.1.28 ko:K01448,ko:K02172 ko01501,ko01503,map01501,map01503 M00627,M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504,ko03036 - - - Amidase_3,Cu_amine_oxidN1 WXD2_k127_619654_0 1123368.AUIS01000006_gene566 3.105e-158 532.0 COG5001@1|root,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,1RM8A@1236|Gammaproteobacteria,2NDJD@225057|Acidithiobacillales 225057|Acidithiobacillales T Diguanylate cyclase - - - - - - - - - - - - EAL,GAF_2,GGDEF,PAS_4,Response_reg WXD2_k127_619654_1 886293.Sinac_7353 1.493e-72 260.0 COG3361@1|root,COG3361@2|Bacteria,2IZQT@203682|Planctomycetes 203682|Planctomycetes S Uncharacterized conserved protein (COG2071) - - - ko:K09166 - - - - ko00000 - - - DUF2071 WXD2_k127_621195_5 861299.J421_0752 3.481e-43 170.0 COG3201@1|root,COG3201@2|Bacteria,1ZTRP@142182|Gemmatimonadetes 142182|Gemmatimonadetes H Nicotinamide mononucleotide transporter - - - ko:K03811 - - - - ko00000,ko02000 4.B.1.1 - - NMN_transporter WXD2_k127_621195_1 1185876.BN8_06099 1.532e-111 388.0 COG4206@1|root,COG4206@2|Bacteria,4PM93@976|Bacteroidetes,47YB2@768503|Cytophagia 976|Bacteroidetes H TonB dependent receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - CarbopepD_reg_2,Plug,TonB_dep_Rec WXD2_k127_621195_9 1123487.KB892857_gene2393 6.97e-09 68.0 COG4235@1|root,COG4235@2|Bacteria,1MY4J@1224|Proteobacteria,2VQ05@28216|Betaproteobacteria,2KW7Q@206389|Rhodocyclales 206389|Rhodocyclales O COG4235 Cytochrome c biogenesis factor - - - ko:K02200 - - - - ko00000 - - - TPR_16 WXD2_k127_621195_8 1242864.D187_009980 2.898e-19 100.0 COG3088@1|root,COG3088@2|Bacteria,1MZZ5@1224|Proteobacteria,43DRS@68525|delta/epsilon subdivisions,2X8U4@28221|Deltaproteobacteria,2Z0DW@29|Myxococcales 28221|Deltaproteobacteria P subunit of a heme lyase - - - ko:K02200 - - - - ko00000 - - - CcmH WXD2_k127_621195_4 215803.DB30_1964 2.837e-47 175.0 COG0526@1|root,COG0526@2|Bacteria,1N726@1224|Proteobacteria,42U61@68525|delta/epsilon subdivisions,2WQRF@28221|Deltaproteobacteria,2YVYE@29|Myxococcales 28221|Deltaproteobacteria CO Redoxin dsbE - - ko:K02199 - - - - ko00000,ko03110 - - - AhpC-TSA WXD2_k127_621195_0 1278073.MYSTI_04691 3.699e-200 643.0 COG1138@1|root,COG1138@2|Bacteria,1MUQS@1224|Proteobacteria,42P4Q@68525|delta/epsilon subdivisions,2WK5G@28221|Deltaproteobacteria,2YU4N@29|Myxococcales 28221|Deltaproteobacteria O Cytochrome c-type biogenesis protein ccmF - - ko:K02198 - - - - ko00000,ko02000 9.B.14.1 - - CcmF_C,Cytochrom_C_asm WXD2_k127_621195_6 1278073.MYSTI_04690 4.185e-33 134.0 COG2332@1|root,COG2332@2|Bacteria 2|Bacteria O Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH ccmE - - ko:K02197 - - - - ko00000 - - - CcmE WXD2_k127_621195_2 378806.STAUR_3693 9.401e-62 220.0 COG0755@1|root,COG0755@2|Bacteria,1MU61@1224|Proteobacteria,42RU4@68525|delta/epsilon subdivisions,2WNN7@28221|Deltaproteobacteria,2YVGN@29|Myxococcales 28221|Deltaproteobacteria O Cytochrome C assembly protein ccmC - - ko:K02195 ko02010,map02010 M00259 - - ko00000,ko00001,ko00002,ko02000 3.A.1.107 - - Cytochrom_C_asm WXD2_k127_621195_3 1242864.D187_007131 1.8e-52 199.0 COG2386@1|root,COG2386@2|Bacteria,1QF23@1224|Proteobacteria,42RAM@68525|delta/epsilon subdivisions,2WMS1@28221|Deltaproteobacteria 28221|Deltaproteobacteria O Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes ccmB - - ko:K02194 ko02010,map02010 M00259 - - ko00000,ko00001,ko00002,ko02000 3.A.1.107 - - CcmB WXD2_k127_621195_7 246197.MXAN_3258 4.98e-26 112.0 COG1131@1|root,COG1131@2|Bacteria 2|Bacteria V ATPase activity ccmA - 3.6.3.41 ko:K01990,ko:K02193 ko02010,map02010 M00254,M00259 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.107 - - ABC_tran WXD2_k127_623999_2 573370.DMR_37320 8.527e-23 108.0 COG1595@1|root,COG1595@2|Bacteria,1RHI0@1224|Proteobacteria,42UEX@68525|delta/epsilon subdivisions,2WPZV@28221|Deltaproteobacteria 28221|Deltaproteobacteria K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 WXD2_k127_623999_0 1121033.AUCF01000033_gene3627 5.796e-160 520.0 COG0492@1|root,COG0492@2|Bacteria,1MXI0@1224|Proteobacteria,2TUAR@28211|Alphaproteobacteria,2JRFF@204441|Rhodospirillales 204441|Rhodospirillales O L-lysine 6-monooxygenase (NADPH-requiring) - - - - - - - - - - - - Pyr_redox_3 WXD2_k127_623999_1 314270.RB2083_4031 9.478e-37 157.0 COG0477@1|root,COG2814@2|Bacteria,1MW1P@1224|Proteobacteria 1224|Proteobacteria EGP Major facilitator Superfamily - - - - - - - - - - - - MFS_1 WXD2_k127_625079_3 929704.Myrod_2561 2.197e-06 54.0 COG3047@1|root,COG3047@2|Bacteria,4NPKA@976|Bacteroidetes,1I1SB@117743|Flavobacteriia,47HQ8@76831|Myroides 976|Bacteroidetes M OmpW family - - - ko:K07275 - - - - ko00000 - - - OmpW WXD2_k127_625079_2 948106.AWZT01000020_gene4138 3.678e-09 66.0 COG3637@1|root,COG3637@2|Bacteria,1N7IC@1224|Proteobacteria,2VVZ0@28216|Betaproteobacteria,1K72N@119060|Burkholderiaceae 28216|Betaproteobacteria M Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety pagL GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005975,GO:0005976,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008653,GO:0009279,GO:0009311,GO:0009987,GO:0016020,GO:0016021,GO:0016787,GO:0016788,GO:0019637,GO:0019867,GO:0030312,GO:0030313,GO:0031224,GO:0031975,GO:0042802,GO:0042803,GO:0043170,GO:0044237,GO:0044238,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044425,GO:0044462,GO:0044464,GO:0046493,GO:0046983,GO:0050528,GO:0052689,GO:0071704,GO:0071944,GO:1901135,GO:1901269,GO:1903509 - ko:K12976 - - - - ko00000,ko01000,ko01005 - - - PagL WXD2_k127_625079_4 309801.trd_A0383 0.0004311 51.0 COG3411@1|root,COG3411@2|Bacteria,2GA0H@200795|Chloroflexi,27YC7@189775|Thermomicrobia 189775|Thermomicrobia C Ferredoxin - - - - - - - - - - - - - WXD2_k127_625079_0 398767.Glov_1605 7.592e-149 498.0 COG1109@1|root,COG1109@2|Bacteria,1QUGD@1224|Proteobacteria,43BUU@68525|delta/epsilon subdivisions,2WKYP@28221|Deltaproteobacteria,43STX@69541|Desulfuromonadales 28221|Deltaproteobacteria G phosphoglucomutase phosphomannomutase alpha beta alpha domain I - - 5.4.2.2,5.4.2.8 ko:K01835,ko:K01840 ko00010,ko00030,ko00051,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 M00114,M00549 R00959,R01057,R01818,R08639 RC00408 ko00000,ko00001,ko00002,ko01000 - - - PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV WXD2_k127_625079_1 1123261.AXDW01000009_gene156 1.873e-83 285.0 COG0668@1|root,COG0668@2|Bacteria,1MXD2@1224|Proteobacteria,1RNUB@1236|Gammaproteobacteria,1X5AX@135614|Xanthomonadales 135614|Xanthomonadales M Mechanosensitive ion channel - - - - - - - - - - - - MS_channel WXD2_k127_631916_4 1227484.C471_08815 1.048e-11 75.0 COG0425@1|root,arCOG02062@2157|Archaea,2XYN1@28890|Euryarchaeota,23WSE@183963|Halobacteria 183963|Halobacteria O redox protein, regulator of disulfide bond formation - - - - - - - - - - - - TusA WXD2_k127_631916_1 1341151.ASZU01000014_gene2149 1.643e-89 309.0 COG0491@1|root,COG0607@1|root,COG0491@2|Bacteria,COG0607@2|Bacteria,1TPE2@1239|Firmicutes,4H9WH@91061|Bacilli,27B4H@186824|Thermoactinomycetaceae 91061|Bacilli P Rhodanese Homology Domain - - - - - - - - - - - - Lactamase_B,Rhodanese WXD2_k127_631916_2 926550.CLDAP_30490 2.1e-53 195.0 COG2210@1|root,COG2210@2|Bacteria,2G77F@200795|Chloroflexi 200795|Chloroflexi S DsrE/DsrF/DrsH-like family - - - - - - - - - - - - DrsE_2 WXD2_k127_631916_0 1304275.C41B8_18181 5.636e-157 506.0 COG0437@1|root,COG3301@1|root,COG0437@2|Bacteria,COG3301@2|Bacteria,1MU1B@1224|Proteobacteria,1SYJH@1236|Gammaproteobacteria 1236|Gammaproteobacteria C 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - - - - - - - - - - Fer4_11,Fer4_3,Fer4_7 WXD2_k127_631916_3 477641.MODMU_4255 1.826e-13 79.0 COG1506@1|root,COG1506@2|Bacteria,2H90U@201174|Actinobacteria,4EVJW@85013|Frankiales 201174|Actinobacteria E Tannase and feruloyl esterase - - - - - - - - - - - - Tannase WXD2_k127_632797_0 443143.GM18_3610 4.103e-171 560.0 COG0643@1|root,COG2198@1|root,COG0643@2|Bacteria,COG2198@2|Bacteria,1MUAG@1224|Proteobacteria,42M6Q@68525|delta/epsilon subdivisions,2WJ5U@28221|Deltaproteobacteria,43S5Y@69541|Desulfuromonadales 28221|Deltaproteobacteria NT Signal transducing histidine kinase homodimeric cheA40H - 2.7.13.3 ko:K03407 ko02020,ko02030,map02020,map02030 M00506 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035 - - - CheW,H-kinase_dim,HATPase_c,Hpt WXD2_k127_632797_1 243231.GSU2221 3.476e-87 296.0 COG3267@1|root,COG3267@2|Bacteria,1REY9@1224|Proteobacteria,42RJB@68525|delta/epsilon subdivisions,2WN99@28221|Deltaproteobacteria,43TEB@69541|Desulfuromonadales 28221|Deltaproteobacteria U Pfam:Arch_ATPase - - - - - - - - - - - - AAA_22 WXD2_k127_632797_4 525897.Dbac_0869 2.183e-14 82.0 COG0835@1|root,COG0835@2|Bacteria,1RAH1@1224|Proteobacteria,42SW0@68525|delta/epsilon subdivisions,2WPFF@28221|Deltaproteobacteria,2MEXD@213115|Desulfovibrionales 28221|Deltaproteobacteria NT Two component signalling adaptor domain - - - ko:K03408 ko02020,ko02030,map02020,map02030 - - - ko00000,ko00001,ko02035 - - - CheW WXD2_k127_632797_3 1232410.KI421413_gene810 2.871e-21 104.0 COG0745@1|root,COG0745@2|Bacteria,1NV0N@1224|Proteobacteria,42ZH3@68525|delta/epsilon subdivisions,2WUW0@28221|Deltaproteobacteria,43UQG@69541|Desulfuromonadales 28221|Deltaproteobacteria T zinc-ribbon domain - - - - - - - - - - - - Response_reg,zinc_ribbon_4 WXD2_k127_632797_2 404380.Gbem_0746 2.333e-56 222.0 COG1413@1|root,COG1413@2|Bacteria,1N55Z@1224|Proteobacteria,42Q7F@68525|delta/epsilon subdivisions,2WPWV@28221|Deltaproteobacteria,43UH8@69541|Desulfuromonadales 28221|Deltaproteobacteria C HEAT repeat - - - - - - - - - - - - HEAT,HEAT_2,HEAT_PBS WXD2_k127_647484_0 402777.KB235903_gene788 7.788e-306 955.0 COG0745@1|root,COG0784@1|root,COG1511@1|root,COG2770@1|root,COG5002@1|root,COG0745@2|Bacteria,COG0784@2|Bacteria,COG1511@2|Bacteria,COG2770@2|Bacteria,COG5002@2|Bacteria,1GHDJ@1117|Cyanobacteria,1H8KY@1150|Oscillatoriales 1117|Cyanobacteria T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - - - - - - - - - - CHASE3,GAF_2,HAMP,HATPase_c,HisKA,Response_reg WXD2_k127_647484_2 1487953.JMKF01000005_gene617 5e-119 388.0 COG1352@1|root,COG1352@2|Bacteria,1G1E5@1117|Cyanobacteria,1H94K@1150|Oscillatoriales 1117|Cyanobacteria NT PFAM CheR methyltransferase, SAM binding domain - - 2.1.1.80 ko:K00575 ko02020,ko02030,map02020,map02030 - - - ko00000,ko00001,ko01000,ko02035 - - - CheR,CheR_N WXD2_k127_647484_3 28072.Nos7524_3104 2.902e-52 202.0 COG2201@1|root,COG2201@2|Bacteria,1G6B8@1117|Cyanobacteria,1HNNM@1161|Nostocales 1117|Cyanobacteria NT CheB methylesterase - - 3.1.1.61,3.5.1.44 ko:K03412 ko02020,ko02030,map02020,map02030 M00506 - - ko00000,ko00001,ko00002,ko01000,ko02022,ko02035 - - - CheB_methylest WXD2_k127_647484_1 1173027.Mic7113_0442 1.456e-131 440.0 COG0745@1|root,COG3437@1|root,COG5002@1|root,COG0745@2|Bacteria,COG3437@2|Bacteria,COG5002@2|Bacteria,1G2MH@1117|Cyanobacteria,1H902@1150|Oscillatoriales 1117|Cyanobacteria T Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - - - - - - - - - - HATPase_c,HisKA,PAS,PAS_3,PAS_4,Response_reg WXD2_k127_651704_1 1267534.KB906758_gene2265 7.324e-268 833.0 COG2936@1|root,COG2936@2|Bacteria,3Y33N@57723|Acidobacteria 57723|Acidobacteria S Hydrolase CocE NonD family - - - - - - - - - - - - PepX_C,Peptidase_S15 WXD2_k127_651704_4 335543.Sfum_2670 9.635e-134 437.0 COG0626@1|root,COG0626@2|Bacteria,1MU57@1224|Proteobacteria,42M67@68525|delta/epsilon subdivisions,2WJQX@28221|Deltaproteobacteria,2MQ8M@213462|Syntrophobacterales 28221|Deltaproteobacteria E PFAM Cys Met metabolism - - 4.4.1.11,4.4.1.8 ko:K01760,ko:K01761 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 M00017 R00654,R00782,R01286,R02408,R04770,R04941 RC00056,RC00069,RC00196,RC00348,RC00382,RC00488,RC00710,RC01209,RC01210,RC01245,RC02303 ko00000,ko00001,ko00002,ko01000 - - - Cys_Met_Meta_PP WXD2_k127_651704_3 765420.OSCT_1210 1.107e-181 586.0 COG0281@1|root,COG0281@2|Bacteria,2G65R@200795|Chloroflexi,376YS@32061|Chloroflexia 32061|Chloroflexia C Malic enzyme, NAD binding domain - - 1.1.1.38 ko:K00027 ko00620,ko01200,ko02020,map00620,map01200,map02020 - R00214 RC00105 ko00000,ko00001,ko01000 - - - Malic_M,malic WXD2_k127_651704_0 243233.MCA0553 2.13e-269 862.0 COG3387@1|root,COG3387@2|Bacteria,1MW9J@1224|Proteobacteria,1T2G2@1236|Gammaproteobacteria,1XGVI@135618|Methylococcales 135618|Methylococcales G PFAM Glycoside hydrolase 15-related - - - - - - - - - - - - - WXD2_k127_651704_2 945713.IALB_1177 1.968e-216 696.0 COG3459@1|root,COG3459@2|Bacteria 2|Bacteria G carbohydrate binding - - - - - - - - - - - - Glyco_hydro_36,Glyco_transf_36 WXD2_k127_651704_5 1123248.KB893327_gene788 3.45e-101 336.0 COG0258@1|root,COG0258@2|Bacteria 2|Bacteria L nuclease activity polA GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 - R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko01000,ko03032,ko03400 - - - 5_3_exonuc,5_3_exonuc_N,DNA_pol_A,DNA_pol_A_exo1 WXD2_k127_651704_7 1267535.KB906767_gene3518 1.274e-89 310.0 COG0577@1|root,COG0577@2|Bacteria,3Y4C7@57723|Acidobacteria 57723|Acidobacteria V MacB-like periplasmic core domain - - - - - - - - - - - - FtsX,MacB_PCD WXD2_k127_651704_8 269799.Gmet_2406 5.297e-65 245.0 COG4591@1|root,COG4591@2|Bacteria,1QXNJ@1224|Proteobacteria,43C4I@68525|delta/epsilon subdivisions,2X7EY@28221|Deltaproteobacteria,43TJA@69541|Desulfuromonadales 28221|Deltaproteobacteria M MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD WXD2_k127_651704_6 1379698.RBG1_1C00001G1666 1.031e-93 312.0 COG1136@1|root,COG1136@2|Bacteria,2NPA8@2323|unclassified Bacteria 2|Bacteria V ABC transporter - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran WXD2_k127_651704_9 1121123.AUAO01000003_gene2225 9.801e-38 152.0 COG2259@1|root,COG2259@2|Bacteria,1N072@1224|Proteobacteria,2UCXT@28211|Alphaproteobacteria,2KJ9S@204458|Caulobacterales 204458|Caulobacterales S PFAM DoxX family protein - - - ko:K15977 - - - - ko00000 - - - DoxX WXD2_k127_651704_11 522373.Smlt2384 1.145e-05 50.0 COG3476@1|root,COG3476@2|Bacteria,1MZC1@1224|Proteobacteria,1SPBS@1236|Gammaproteobacteria,1XC7T@135614|Xanthomonadales 135614|Xanthomonadales T TspO/MBR family - - - ko:K05770 ko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166 - - - ko00000,ko00001,ko02000 9.A.24 - - TspO_MBR WXD2_k127_651704_10 1458275.AZ34_15275 5.46e-06 48.0 COG1943@1|root,COG1943@2|Bacteria,1P19I@1224|Proteobacteria,2VKZ3@28216|Betaproteobacteria,4AB1D@80864|Comamonadaceae 28216|Betaproteobacteria L Transposase IS200 like - - - ko:K07491 - - - - ko00000 - - - Y1_Tnp WXD2_k127_672747_4 1521187.JPIM01000060_gene2917 1.572e-36 141.0 COG0022@1|root,COG0022@2|Bacteria,2G5JU@200795|Chloroflexi,374SG@32061|Chloroflexia 32061|Chloroflexia C PFAM Transketolase central region - - - - - - - - - - - - Transket_pyr,Transketolase_C WXD2_k127_672747_2 324057.Pjdr2_1479 3.093e-56 209.0 COG0667@1|root,COG0667@2|Bacteria,1UKPC@1239|Firmicutes,4HCF8@91061|Bacilli,26VRP@186822|Paenibacillaceae 91061|Bacilli C Aldo/keto reductase family - - - - - - - - - - - - Aldo_ket_red WXD2_k127_672747_5 1433126.BN938_0018 1.837e-05 53.0 COG0537@1|root,COG0537@2|Bacteria,4NQ4X@976|Bacteroidetes,2FSRY@200643|Bacteroidia,22UGW@171550|Rikenellaceae 976|Bacteroidetes FG HIT domain hinT - - ko:K02503 - - - - ko00000,ko04147 - - - HIT WXD2_k127_672747_3 1089548.KI783301_gene2277 8.265e-44 167.0 COG1309@1|root,COG1309@2|Bacteria,1TRSH@1239|Firmicutes,4H9RC@91061|Bacilli,3WFTM@539002|Bacillales incertae sedis 91061|Bacilli K YsiA-like protein, C-terminal region fadR - - ko:K13770 - - - - ko00000,ko03000 - - - TetR_C_4,TetR_N WXD2_k127_672747_1 234267.Acid_2705 4.342e-164 557.0 COG1266@1|root,COG1266@2|Bacteria 2|Bacteria V CAAX protease self-immunity - - - ko:K07052 - - - - ko00000 - - - Abi WXD2_k127_672747_0 215803.DB30_4307 8.087e-179 578.0 COG0493@1|root,COG0543@1|root,COG0493@2|Bacteria,COG0543@2|Bacteria,1Q2ZJ@1224|Proteobacteria,438P5@68525|delta/epsilon subdivisions,2X8TH@28221|Deltaproteobacteria,2YXE6@29|Myxococcales 28221|Deltaproteobacteria CEH Pyridine nucleotide-disulphide oxidoreductase - - - - - - - - - - - - Pyr_redox_2 WXD2_k127_673382_2 926569.ANT_20590 7.136e-15 74.0 COG4260@1|root,COG4260@2|Bacteria,2G6J2@200795|Chloroflexi 200795|Chloroflexi S SPFH domain-Band 7 family - - - - - - - - - - - - Band_7_1,HTH_17,zinc_ribbon_2 WXD2_k127_673382_1 309801.trd_1666 3.471e-83 286.0 COG0648@1|root,COG0648@2|Bacteria,2G5XZ@200795|Chloroflexi,27XEG@189775|Thermomicrobia 189775|Thermomicrobia L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin nfo - 3.1.21.2 ko:K01151 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - AP_endonuc_2 WXD2_k127_673382_0 584708.Apau_0039 6.44e-161 535.0 COG0538@1|root,COG0538@2|Bacteria,3TACN@508458|Synergistetes 508458|Synergistetes C isocitrate dehydrogenase, NADP-dependent - - 1.1.1.42 ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 M00009,M00010,M00173,M00740 R00267,R00268,R01899 RC00001,RC00084,RC00114,RC00626,RC02801 br01601,ko00000,ko00001,ko00002,ko01000 - - - Iso_dh WXD2_k127_673382_3 1035191.HMPREF0185_00494 0.0002356 43.0 COG1246@1|root,COG1246@2|Bacteria,1NBIV@1224|Proteobacteria,2UGMF@28211|Alphaproteobacteria,2KJ38@204458|Caulobacterales 204458|Caulobacterales E Acetyltransferase (GNAT) domain - - - - - - - - - - - - - WXD2_k127_674395_2 1242864.D187_000780 4.041e-17 87.0 COG1451@1|root,COG1451@2|Bacteria,1P1X1@1224|Proteobacteria,4314C@68525|delta/epsilon subdivisions,2WX53@28221|Deltaproteobacteria 28221|Deltaproteobacteria S nucleotide metabolic process - - - - - - - - - - - - - WXD2_k127_674395_0 378806.STAUR_4784 1.068e-88 321.0 COG0265@1|root,COG0265@2|Bacteria,1MU63@1224|Proteobacteria,42N89@68525|delta/epsilon subdivisions,2WIUT@28221|Deltaproteobacteria,2YZ41@29|Myxococcales 28221|Deltaproteobacteria M Domain present in PSD-95, Dlg, and ZO-1/2. - - 3.4.21.107 ko:K04771 ko01503,ko02020,map01503,map02020 M00728 - - ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 - - - PDZ_2,Trypsin_2 WXD2_k127_674395_1 555079.Toce_2266 2.678e-54 202.0 COG1597@1|root,COG1597@2|Bacteria,1TQJH@1239|Firmicutes,24BHT@186801|Clostridia 186801|Clostridia I lipid kinase, YegS Rv2252 BmrU family ytlR - - - - - - - - - - - DAGK_cat WXD2_k127_676128_5 1267535.KB906767_gene3880 2.462e-40 156.0 arCOG02075@1|root,33AGA@2|Bacteria,3Y7D5@57723|Acidobacteria 57723|Acidobacteria S NnrS protein - - - - - - - - - - - - NnrS WXD2_k127_676128_4 204669.Acid345_0362 6.191e-75 259.0 COG0664@1|root,COG0664@2|Bacteria,3Y4WU@57723|Acidobacteria,2JMTC@204432|Acidobacteriia 204432|Acidobacteriia K helix_turn_helix, cAMP Regulatory protein - - - ko:K10914 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 - - - ko00000,ko00001,ko03000 - - - HTH_Crp_2,cNMP_binding WXD2_k127_676128_0 653733.Selin_2438 6.018e-223 696.0 COG2223@1|root,COG2223@2|Bacteria 2|Bacteria P nitrite transmembrane transporter activity - - - ko:K02575 ko00910,map00910 M00615 - - ko00000,ko00001,ko00002,ko02000 2.A.1.8 - - MFS_1 WXD2_k127_676128_1 269799.Gmet_0333 1.141e-201 636.0 COG2223@1|root,COG2223@2|Bacteria,1MU27@1224|Proteobacteria,42PGA@68525|delta/epsilon subdivisions,2WWKR@28221|Deltaproteobacteria 28221|Deltaproteobacteria P Major Facilitator Superfamily - - - ko:K02575 ko00910,map00910 M00615 - - ko00000,ko00001,ko00002,ko02000 2.A.1.8 - - MFS_1 WXD2_k127_676128_2 83406.HDN1F_27190 4.01e-121 402.0 COG4585@1|root,COG5000@1|root,COG4585@2|Bacteria,COG5000@2|Bacteria,1MWPN@1224|Proteobacteria,1T1IF@1236|Gammaproteobacteria,1J794@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria T Histidine kinase - - - - - - - - - - - - 7TMR-DISM_7TM,HATPase_c,HisKA_3,PAS,PAS_4,PAS_9 WXD2_k127_676128_6 1217718.ALOU01000022_gene2310 4.707e-37 144.0 COG4585@1|root,COG4585@2|Bacteria,1R43J@1224|Proteobacteria,2VPEB@28216|Betaproteobacteria,1K250@119060|Burkholderiaceae 28216|Betaproteobacteria T PFAM ATP-binding region, ATPase domain protein - - 2.7.13.3 ko:K02486 - - - - ko00000,ko01000,ko01001,ko02022 - - - CHASE,HATPase_c,HATPase_c_2,HisKA_3,PAS,PAS_4,PAS_9 WXD2_k127_676128_3 83406.HDN1F_27180 3.39e-77 278.0 COG2197@1|root,COG2197@2|Bacteria,1MWGM@1224|Proteobacteria,1RQ1J@1236|Gammaproteobacteria,1J609@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain letA - - ko:K07689,ko:K07690 ko02020,ko02025,ko02026,ko05111,ko05133,map02020,map02025,map02026,map05111,map05133 M00475,M00477,M00697 - - ko00000,ko00001,ko00002,ko01504,ko02022 - - - GerE,Response_reg WXD2_k127_6787_7 1156935.QWE_16848 7.433e-24 106.0 2E8GZ@1|root,332V8@2|Bacteria,1NDF5@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - WXD2_k127_6787_10 40571.JOEA01000013_gene1492 6.233e-07 61.0 COG4758@1|root,COG4758@2|Bacteria,2I8FE@201174|Actinobacteria,4E31D@85010|Pseudonocardiales 201174|Actinobacteria S Cell wall-active antibiotics response 4TMS YvqF - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - - - - - - - - - - DUF1707,DUF2154 WXD2_k127_6787_8 1502852.FG94_03179 1.521e-12 77.0 29KMV@1|root,307J5@2|Bacteria,1PX4Q@1224|Proteobacteria,2WCMS@28216|Betaproteobacteria,477X5@75682|Oxalobacteraceae 28216|Betaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_6787_6 1198452.Jab_1c25290 5.65e-35 143.0 COG4758@1|root,COG4758@2|Bacteria,1RFX6@1224|Proteobacteria,2WCSU@28216|Betaproteobacteria,4772Z@75682|Oxalobacteraceae 28216|Betaproteobacteria S membrane - - - - - - - - - - - - - WXD2_k127_6787_3 760117.JN27_19870 1.98e-65 235.0 COG2972@1|root,COG2972@2|Bacteria,1MXVQ@1224|Proteobacteria,2W9CU@28216|Betaproteobacteria,4769K@75682|Oxalobacteraceae 28216|Betaproteobacteria T Histidine kinase - - - - - - - - - - - - His_kinase WXD2_k127_6787_2 1121920.AUAU01000002_gene2094 2.633e-79 271.0 COG3279@1|root,COG3279@2|Bacteria,3Y3B3@57723|Acidobacteria 57723|Acidobacteria T LytTr DNA-binding domain - - - ko:K02477 - - - - ko00000,ko02022 - - - LytTR,Response_reg WXD2_k127_6787_0 1245469.S58_36280 5.153e-184 605.0 2EPJD@1|root,33H61@2|Bacteria,1P9VX@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - WXD2_k127_6787_4 1041138.KB890222_gene515 2.192e-59 213.0 COG1764@1|root,COG1764@2|Bacteria,1RI5C@1224|Proteobacteria,2U99X@28211|Alphaproteobacteria,4BEGN@82115|Rhizobiaceae 28211|Alphaproteobacteria O OsmC-like protein - - - - - - - - - - - - OsmC WXD2_k127_6787_5 1242864.D187_007675 6.471e-55 200.0 COG5285@1|root,COG5285@2|Bacteria,1R9W1@1224|Proteobacteria 1224|Proteobacteria Q phytanoyl-CoA dioxygenase - - - - - - - - - - - - PhyH WXD2_k127_6787_11 643867.Ftrac_1661 7.694e-05 53.0 COG3012@1|root,COG3012@2|Bacteria 2|Bacteria - - secA_2 - - - - - - - - - - - SEC-C WXD2_k127_6787_9 398767.Glov_2786 3.299e-11 71.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2WIT0@28221|Deltaproteobacteria,43U5W@69541|Desulfuromonadales 28221|Deltaproteobacteria T response regulator gnfM - - ko:K07712 ko02020,map02020 M00497 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat WXD2_k127_6787_1 1120965.AUBV01000001_gene3515 3.941e-82 283.0 COG1402@1|root,COG1402@2|Bacteria 2|Bacteria I creatininase - - 3.5.2.10 ko:K01470 ko00330,map00330 - R01884 RC00615 ko00000,ko00001,ko01000 - - - Creatininase WXD2_k127_684554_4 240015.ACP_1819 1.095e-49 185.0 COG1484@1|root,COG1484@2|Bacteria,3Y3EK@57723|Acidobacteria,2JI9M@204432|Acidobacteriia 204432|Acidobacteriia L IstB-like ATP binding protein - - - ko:K02315 - - - - ko00000,ko03032 - - - IstB_IS21 WXD2_k127_684554_1 1343739.PAP_04820 1.529e-99 337.0 COG1167@1|root,arCOG00492@2157|Archaea,2XVD6@28890|Euryarchaeota,243KU@183968|Thermococci 183968|Thermococci K Alanine-glyoxylate amino-transferase - - - ko:K05825 ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210 - R01939 RC00006 ko00000,ko00001,ko01000 - - - Aminotran_1_2 WXD2_k127_684554_3 679935.Alfi_1286 5.212e-56 208.0 COG1435@1|root,COG1435@2|Bacteria,4NE5R@976|Bacteroidetes,2FN2K@200643|Bacteroidia 976|Bacteroidetes F thymidine kinase tdk GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 ko:K00857 ko00240,ko00983,ko01100,map00240,map00983,map01100 - R01567,R02099,R08233 RC00002,RC00017 ko00000,ko00001,ko01000 - - - TK WXD2_k127_684554_2 314285.KT71_04350 2.393e-83 295.0 COG0624@1|root,COG0624@2|Bacteria,1MWJS@1224|Proteobacteria,1SKMW@1236|Gammaproteobacteria,1J9PK@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria E Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase - - - - - - - - - - - - M20_dimer,Peptidase_M20,Peptidase_M28 WXD2_k127_684554_5 909663.KI867151_gene3116 2.372e-18 100.0 COG4485@1|root,COG4485@2|Bacteria,1NBM0@1224|Proteobacteria,42WPS@68525|delta/epsilon subdivisions,2WS8D@28221|Deltaproteobacteria,2MS9Z@213462|Syntrophobacterales 28221|Deltaproteobacteria S Bacterial membrane protein, YfhO - - - - - - - - - - - - YfhO WXD2_k127_684554_6 234267.Acid_4797 1.135e-08 68.0 COG4485@1|root,COG4485@2|Bacteria 2|Bacteria M Bacterial membrane protein, YfhO - - - - - - - - - - - - YfhO WXD2_k127_684554_7 234267.Acid_5252 5.09e-06 53.0 COG3829@1|root,COG3829@2|Bacteria,3Y5ZF@57723|Acidobacteria 57723|Acidobacteria KT PFAM helix-turn-helix, Fis-type - - - - - - - - - - - - HTH_8 WXD2_k127_684554_0 986075.CathTA2_0684 3.751e-171 563.0 COG0557@1|root,COG0557@2|Bacteria,1TQ1G@1239|Firmicutes,4HBBH@91061|Bacilli 91061|Bacilli J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs rnr - - ko:K12573 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03016,ko03019 - - - OB_RNB,RNB,S1 WXD2_k127_6857_1 926550.CLDAP_10980 3.514e-87 292.0 COG3033@1|root,COG3033@2|Bacteria,2G7YV@200795|Chloroflexi 200795|Chloroflexi E PFAM aromatic amino acid beta-eliminating lyase threonine aldolase tpl - 4.1.99.1,4.1.99.2 ko:K01667,ko:K01668 ko00350,ko00380,map00350,map00380 - R00673,R00728 RC00209,RC00355,RC00364 ko00000,ko00001,ko01000 - - - Beta_elim_lyase WXD2_k127_6857_3 1120792.JAFV01000001_gene1049 2.675e-05 56.0 COG4775@1|root,COG4775@2|Bacteria,1MU0D@1224|Proteobacteria,2TR7W@28211|Alphaproteobacteria,36XC6@31993|Methylocystaceae 28211|Alphaproteobacteria M Surface antigen bamA - - ko:K07277 - - - - ko00000,ko02000,ko03029 1.B.33 - - Bac_surface_Ag,POTRA WXD2_k127_6857_2 460265.Mnod_3029 3.815e-20 105.0 COG2204@1|root,COG4191@1|root,COG2204@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria,2U17W@28211|Alphaproteobacteria 28211|Alphaproteobacteria T Histidine kinase - - - - - - - - - - - - GAF,HATPase_c,HisKA,PAS,PAS_4,PAS_7,Response_reg WXD2_k127_6857_0 448385.sce3597 9.161e-114 396.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2WJ88@28221|Deltaproteobacteria,2YTZW@29|Myxococcales 28221|Deltaproteobacteria T Bacterial regulatory protein, Fis family ntrX - - ko:K13599 ko02020,map02020 M00498 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat WXD2_k127_691086_2 639030.JHVA01000001_gene2909 1.121e-27 129.0 COG3132@1|root,COG3132@2|Bacteria,3Y50M@57723|Acidobacteria,2JMSB@204432|Acidobacteriia 204432|Acidobacteriia S Belongs to the UPF0502 family - - - ko:K09915 - - - - ko00000 - - - DUF480 WXD2_k127_691086_1 1454004.AW11_02520 2.314e-85 297.0 COG0578@1|root,COG0578@2|Bacteria,1MUMY@1224|Proteobacteria,2VN8I@28216|Betaproteobacteria,1KQRY@119066|unclassified Betaproteobacteria 28216|Betaproteobacteria C FAD dependent oxidoreductase glpD - 1.1.5.3 ko:K00111 ko00564,ko01110,map00564,map01110 - R00848 RC00029 ko00000,ko00001,ko01000 - - - DAO,DAO_C WXD2_k127_691086_0 323261.Noc_1392 3.352e-101 344.0 COG1752@1|root,COG1752@2|Bacteria,1PDQ2@1224|Proteobacteria,1RMWI@1236|Gammaproteobacteria,1WYC3@135613|Chromatiales 135613|Chromatiales S esterase of the alpha-beta hydrolase superfamily - - - ko:K07001 - - - - ko00000 - - - Patatin WXD2_k127_691086_3 264198.Reut_B5818 5.633e-24 107.0 COG3629@1|root,COG3629@2|Bacteria 2|Bacteria K phosphorelay signal transduction system - - - - - - - - - - - - AAA_16,BTAD,TPR_12,Trans_reg_C WXD2_k127_699688_1 479434.Sthe_0881 2.665e-29 119.0 arCOG06390@1|root,330IR@2|Bacteria 2|Bacteria S Gas vesicle protein K gvpK - - - - - - - - - - - Gas_vesicle,GvpK WXD2_k127_699688_3 479434.Sthe_0882 1.225e-25 116.0 2E5BC@1|root,3303G@2|Bacteria,2G97H@200795|Chloroflexi 200795|Chloroflexi S Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth - - - - - - - - - - - - Gas_vesicle WXD2_k127_699688_2 1278073.MYSTI_01040 1.65e-28 128.0 COG3023@1|root,COG3023@2|Bacteria,1RDHU@1224|Proteobacteria,42X49@68525|delta/epsilon subdivisions,2WT55@28221|Deltaproteobacteria,2YXJ2@29|Myxococcales 28221|Deltaproteobacteria V Ami_2 - - 3.5.1.28 ko:K01447 - - R04112 RC00064,RC00141 ko00000,ko01000 - - - Amidase_2,PG_binding_1 WXD2_k127_699688_0 1121859.KB890759_gene1867 4.824e-44 186.0 COG1073@1|root,COG1073@2|Bacteria,4NID3@976|Bacteroidetes,47VBV@768503|Cytophagia 976|Bacteroidetes S alpha beta - - - - - - - - - - - - DUF4332 WXD2_k127_707861_4 946077.W5A_01685 2.053e-25 106.0 COG0396@1|root,COG0396@2|Bacteria,4NEMY@976|Bacteroidetes,1HWTU@117743|Flavobacteriia 976|Bacteroidetes O Part of SUF system involved in inserting iron-sulfur clusters into proteins sufC - - ko:K09013 - - - - ko00000,ko02000 - - - ABC_tran WXD2_k127_707861_1 234267.Acid_7701 5.275e-98 336.0 COG0719@1|root,COG0719@2|Bacteria,3Y4EK@57723|Acidobacteria 57723|Acidobacteria O Uncharacterized protein family (UPF0051) - - - ko:K09015 - - - - ko00000 - - - UPF0051 WXD2_k127_707861_0 483219.LILAB_02825 7.778e-175 559.0 COG0520@1|root,COG0520@2|Bacteria,1MUPD@1224|Proteobacteria,42PJT@68525|delta/epsilon subdivisions,2WKPW@28221|Deltaproteobacteria,2YXCR@29|Myxococcales 28221|Deltaproteobacteria E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine sufS - 2.8.1.7,4.4.1.16 ko:K11717 ko00450,ko01100,map00450,map01100 - R03599,R11528 RC00961,RC01789,RC02313 ko00000,ko00001,ko01000 - - - Aminotran_5 WXD2_k127_707861_3 1283300.ATXB01000001_gene922 1.32e-51 188.0 COG0822@1|root,COG0822@2|Bacteria,1RD5K@1224|Proteobacteria,1S3P1@1236|Gammaproteobacteria,1XF3J@135618|Methylococcales 135618|Methylococcales C TIGRFAM SUF system FeS - - - ko:K04488 - - - - ko00000 - - - NifU_N WXD2_k127_707861_2 1122604.JONR01000023_gene4160 4.062e-59 210.0 COG2151@1|root,COG2151@2|Bacteria,1MZ9Y@1224|Proteobacteria,1S36X@1236|Gammaproteobacteria,1X3XG@135614|Xanthomonadales 135614|Xanthomonadales S FeS assembly SUF system protein SufT - - - - - - - - - - - - FeS_assembly_P WXD2_k127_707861_5 204669.Acid345_1886 5.518e-23 103.0 COG4640@1|root,COG4640@2|Bacteria 2|Bacteria KT response to antibiotic - - - - - - - - - - - - CD225,DUF4339,zinc_ribbon_2 WXD2_k127_712413_1 485913.Krac_9819 2.469e-50 186.0 2DQBG@1|root,335T7@2|Bacteria,2G96K@200795|Chloroflexi 200795|Chloroflexi C Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) - - - - - - - - - - - - GRDB WXD2_k127_712413_2 986075.CathTA2_1857 4.4e-35 136.0 COG1225@1|root,COG1225@2|Bacteria,1V6MU@1239|Firmicutes,4HK8J@91061|Bacilli 91061|Bacilli O Redoxin - - - - - - - - - - - - AhpC-TSA WXD2_k127_712413_3 1051632.TPY_0743 1.802e-10 63.0 COG1225@1|root,COG1225@2|Bacteria,1VGP9@1239|Firmicutes 1239|Firmicutes O Redoxin - - - - - - - - - - - - AhpC-TSA WXD2_k127_712413_0 1449080.JQMV01000003_gene1132 5.723e-58 215.0 COG1281@1|root,COG1281@2|Bacteria,1WJ1Y@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress hslO - - ko:K04083 - - - - ko00000,ko03110 - - - HSP33 WXD2_k127_738300_3 240292.Ava_4076 5.251e-64 224.0 COG2021@1|root,COG2021@2|Bacteria,1G4G5@1117|Cyanobacteria,1HM4T@1161|Nostocales 1117|Cyanobacteria E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine metXA - 2.3.1.31 ko:K00641 ko00270,ko01100,ko01130,map00270,map01100,map01130 - R01776 RC00004,RC00041 ko00000,ko00001,ko01000 - - - Abhydrolase_1 WXD2_k127_738300_7 1173028.ANKO01000038_gene4771 3.027e-42 175.0 COG2021@1|root,COG2021@2|Bacteria,1G42P@1117|Cyanobacteria,1HEA0@1150|Oscillatoriales 1117|Cyanobacteria E alpha/beta hydrolase fold metXA - - - - - - - - - - - Abhydrolase_1 WXD2_k127_738300_0 395961.Cyan7425_2860 3.412e-230 720.0 COG2873@1|root,COG2873@2|Bacteria,1G4EH@1117|Cyanobacteria 1117|Cyanobacteria E O-acetylhomoserine sulfhydrylase - - 2.5.1.49 ko:K01740 ko00270,ko01100,map00270,map01100 - R01287,R04859 RC00020,RC02821,RC02848 ko00000,ko00001,ko01000 - - - Cys_Met_Meta_PP WXD2_k127_738300_1 290397.Adeh_3188 2.881e-130 434.0 COG4412@1|root,COG4412@2|Bacteria 2|Bacteria S peptidase activity, acting on L-amino acid peptides - - - ko:K07004,ko:K09955 - - - - ko00000 - - - Big_4,FTP,Laminin_G_3,PA,Peptidase_M36 WXD2_k127_738300_4 479434.Sthe_0138 1.367e-53 207.0 COG1404@1|root,COG1404@2|Bacteria,2G7HM@200795|Chloroflexi 200795|Chloroflexi O PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - ko:K14645,ko:K17734 ko02024,map02024 - - - ko00000,ko00001,ko01000,ko01002,ko03110 - - - Peptidase_S8 WXD2_k127_738300_5 1463901.JOIY01000002_gene1036 1.442e-53 199.0 COG1125@1|root,COG1125@2|Bacteria,2GJHI@201174|Actinobacteria 201174|Actinobacteria E ABC transporter opuCA - - ko:K05847 ko02010,map02010 M00209 - - ko00000,ko00001,ko00002,ko02000 3.A.1.12 - - ABC_tran WXD2_k127_738300_6 1340493.JNIF01000003_gene4620 1.697e-42 174.0 COG1174@1|root,COG1174@2|Bacteria 2|Bacteria P glycine betaine transport - - - ko:K05845,ko:K05846 ko02010,map02010 M00209 - - ko00000,ko00001,ko00002,ko02000 3.A.1.12 - - BPD_transp_1,OpuAC WXD2_k127_738300_2 1173028.ANKO01000052_gene1671 1.213e-79 276.0 COG1732@1|root,COG1732@2|Bacteria,1G1ZS@1117|Cyanobacteria,1H9PY@1150|Oscillatoriales 1117|Cyanobacteria M PFAM Substrate binding domain of ABC-type glycine betaine transport system - - - ko:K05845,ko:K05846 ko02010,map02010 M00209 - - ko00000,ko00001,ko00002,ko02000 3.A.1.12 - - BPD_transp_1,OpuAC WXD2_k127_739185_4 83406.HDN1F_21550 0.0003269 53.0 COG5276@1|root,COG5276@2|Bacteria,1R46A@1224|Proteobacteria,1RY7V@1236|Gammaproteobacteria 1236|Gammaproteobacteria S LVIVD repeat - - - - - - - - - - - - Big_5,LVIVD WXD2_k127_739185_0 1163408.UU9_02536 6.072e-53 197.0 COG0503@1|root,COG0503@2|Bacteria,1MVZ6@1224|Proteobacteria,1S2N9@1236|Gammaproteobacteria,1X6DC@135614|Xanthomonadales 135614|Xanthomonadales F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis apt - 2.4.2.7 ko:K00759 ko00230,ko01100,map00230,map01100 - R00190,R01229,R04378 RC00063 ko00000,ko00001,ko01000,ko04147 - - - Pribosyltran WXD2_k127_739185_2 1385511.N783_15005 3.113e-17 85.0 COG1254@1|root,COG1254@2|Bacteria,1VEM9@1239|Firmicutes,4HNN7@91061|Bacilli,2YAVE@289201|Pontibacillus 91061|Bacilli C Acylphosphatase acyP GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 - R00317,R01421,R01515 RC00043 ko00000,ko00001,ko01000 - - iSB619.SA_RS07020 Acylphosphatase WXD2_k127_739185_3 1121921.KB898710_gene524 1.831e-07 65.0 COG2340@1|root,COG3210@1|root,COG2340@2|Bacteria,COG3210@2|Bacteria,1QUXB@1224|Proteobacteria 1224|Proteobacteria U 6-phosphogluconolactonase activity - - - ko:K20276 ko02024,map02024 - - - ko00000,ko00001 - - - Autotransporter,Big_3_2,CAP,Calx-beta,DUF11,DUF4347,Exo_endo_phos,He_PIG,fn3 WXD2_k127_739185_1 335543.Sfum_3494 1.159e-22 115.0 COG4447@1|root,COG4447@2|Bacteria,1MVIT@1224|Proteobacteria,42S9Y@68525|delta/epsilon subdivisions,2WNFW@28221|Deltaproteobacteria 28221|Deltaproteobacteria G K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - - - - - - - - - - Sortilin-Vps10 WXD2_k127_75500_4 926566.Terro_0571 1.051e-07 59.0 COG0308@1|root,COG0457@1|root,COG0308@2|Bacteria,COG0457@2|Bacteria,3Y6C4@57723|Acidobacteria,2JM8A@204432|Acidobacteriia 204432|Acidobacteriia E Tetratricopeptide repeats - - - - - - - - - - - - - WXD2_k127_75500_1 329726.AM1_6250 2.035e-72 262.0 COG3258@1|root,COG3258@2|Bacteria,1G8DY@1117|Cyanobacteria 1117|Cyanobacteria C Cytochrome c - - - - - - - - - - - - - WXD2_k127_75500_2 1121920.AUAU01000006_gene301 6.976e-52 194.0 2BYAB@1|root,32R2Z@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - WXD2_k127_75500_0 686340.Metal_1312 7.647e-97 326.0 COG0656@1|root,COG0656@2|Bacteria,1MWFS@1224|Proteobacteria,1RMX6@1236|Gammaproteobacteria,1XE6X@135618|Methylococcales 135618|Methylococcales S aldo keto reductase - - - - - - - - - - - - Aldo_ket_red WXD2_k127_75500_3 404589.Anae109_1648 4.534e-30 124.0 COG5592@1|root,COG5592@2|Bacteria 2|Bacteria I hemerythrin HHE cation binding domain - - - - - - - - - - - - Hemerythrin,Phasin_2 WXD2_k127_757684_10 1123376.AUIU01000018_gene62 3.315e-07 56.0 COG3221@1|root,COG3221@2|Bacteria 2|Bacteria P organic phosphonate transport phnD2 - - ko:K02044 ko02010,map02010 M00223 - - ko00000,ko00001,ko00002,ko02000 3.A.1.9 - - Phosphonate-bd WXD2_k127_757684_2 1242864.D187_007444 5.426e-86 304.0 COG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,42KZR@68525|delta/epsilon subdivisions,2WJ2T@28221|Deltaproteobacteria,2YX57@29|Myxococcales 28221|Deltaproteobacteria T CHASE3 domain - - - ko:K03406 ko02020,ko02030,map02020,map02030 - - - ko00000,ko00001,ko02035 - - - 4HB_MCP_1,CHASE3,HAMP,MCPsignal WXD2_k127_757684_4 290397.Adeh_0606 6.002e-50 181.0 COG0745@1|root,COG0745@2|Bacteria,1RI9T@1224|Proteobacteria,4321Z@68525|delta/epsilon subdivisions,2WWZ3@28221|Deltaproteobacteria,2Z0DC@29|Myxococcales 28221|Deltaproteobacteria T cheY-homologous receiver domain - - - - - - - - - - - - PilZ,Response_reg WXD2_k127_757684_7 1121920.AUAU01000022_gene2495 4.712e-32 136.0 COG2203@1|root,COG2203@2|Bacteria 2|Bacteria T Gaf domain - - - ko:K07814 - - - - ko00000,ko02022 - - - GAF,GAF_2,HATPase_c,HD,HD_5,HWE_HK,HisKA,PAS,PAS_3,PAS_4,PAS_9,Response_reg WXD2_k127_757684_6 448385.sce2204 1.112e-32 132.0 COG1871@1|root,COG1871@2|Bacteria,1RI55@1224|Proteobacteria,42W4V@68525|delta/epsilon subdivisions,2WRZ4@28221|Deltaproteobacteria,2Z39D@29|Myxococcales 28221|Deltaproteobacteria NT CheD chemotactic sensory transduction cheD - 3.5.1.44 ko:K03411 ko02030,map02030 - - - ko00000,ko00001,ko01000,ko02035 - - - CheD WXD2_k127_757684_0 404589.Anae109_0647 1.93e-127 436.0 COG0643@1|root,COG0643@2|Bacteria,1MUAG@1224|Proteobacteria,42Y7C@68525|delta/epsilon subdivisions,2WTJH@28221|Deltaproteobacteria,2YXEJ@29|Myxococcales 28221|Deltaproteobacteria NT Chemotaxis protein histidine kinase and related kinases cheA2 - 2.7.13.3 ko:K03407 ko02020,ko02030,map02020,map02030 M00506 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035 - - - CheW,H-kinase_dim,HATPase_c,Hpt WXD2_k127_757684_3 1121920.AUAU01000022_gene2490 1.39e-74 276.0 COG1352@1|root,COG1352@2|Bacteria,3Y4GP@57723|Acidobacteria 57723|Acidobacteria NT Methyltransferase, chemotaxis proteins - - 2.1.1.80 ko:K00575 ko02020,ko02030,map02020,map02030 - - - ko00000,ko00001,ko01000,ko02035 - - - CheR,CheR_N WXD2_k127_757684_1 1096546.WYO_5957 1.629e-98 337.0 COG2201@1|root,COG2201@2|Bacteria,1MWCN@1224|Proteobacteria,2TSGV@28211|Alphaproteobacteria,1JS2R@119045|Methylobacteriaceae 28211|Alphaproteobacteria NT catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR cheB - 3.1.1.61,3.5.1.44 ko:K03412 ko02020,ko02030,map02020,map02030 M00506 - - ko00000,ko00001,ko00002,ko01000,ko02022,ko02035 - - - CheB_methylest,Response_reg WXD2_k127_757684_8 1121920.AUAU01000022_gene2495 6.465e-31 131.0 COG2203@1|root,COG2203@2|Bacteria 2|Bacteria T Gaf domain - - - ko:K07814 - - - - ko00000,ko02022 - - - GAF,GAF_2,HATPase_c,HD,HD_5,HWE_HK,HisKA,PAS,PAS_3,PAS_4,PAS_9,Response_reg WXD2_k127_757684_5 404589.Anae109_0650 6.833e-47 174.0 COG0745@1|root,COG0745@2|Bacteria,1RI9T@1224|Proteobacteria,4321Z@68525|delta/epsilon subdivisions,2WWZ3@28221|Deltaproteobacteria,2Z0DC@29|Myxococcales 28221|Deltaproteobacteria T cheY-homologous receiver domain - - - - - - - - - - - - PilZ,Response_reg WXD2_k127_757684_9 596154.Alide2_3839 1.237e-11 72.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,2VHSB@28216|Betaproteobacteria,4A9WN@80864|Comamonadaceae 28216|Betaproteobacteria T Two component, sigma54 specific, transcriptional regulator, Fis family pilR - - ko:K02667 ko02020,map02020 M00501 - - ko00000,ko00001,ko00002,ko02022,ko02035 - - - HTH_8,Response_reg,Sigma54_activat WXD2_k127_76040_4 1089550.ATTH01000001_gene729 5.856e-20 102.0 COG1651@1|root,COG1651@2|Bacteria 2|Bacteria O Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - - - - - - - - - - Thioredoxin_4 WXD2_k127_76040_2 1565129.JSFF01000004_gene3241 3.08e-32 135.0 COG0494@1|root,COG0494@2|Bacteria,1RD2C@1224|Proteobacteria,1SA4Q@1236|Gammaproteobacteria,2QBT3@267890|Shewanellaceae 1236|Gammaproteobacteria L PFAM NUDIX hydrolase nudL GO:0003674,GO:0003824,GO:0016787,GO:0016817,GO:0016818 - - - - - - - - - - DUF1289,NUDIX WXD2_k127_76040_1 234267.Acid_6233 4.871e-61 229.0 COG2227@1|root,COG2227@2|Bacteria 2|Bacteria H 3-demethylubiquinone-9 3-O-methyltransferase activity - - 2.1.1.294,2.7.1.181 ko:K18827 - - R10657,R10658 RC00002,RC00003,RC00078,RC03220 ko00000,ko01000,ko01005 - - - Glyco_trans_1_4,Glycos_transf_1,Glycos_transf_2,Methyltransf_11,Methyltransf_23,Methyltransf_25 WXD2_k127_76040_0 269799.Gmet_2366 2.112e-122 402.0 COG1186@1|root,COG1186@2|Bacteria,1MUAW@1224|Proteobacteria,42MKD@68525|delta/epsilon subdivisions,2WIZP@28221|Deltaproteobacteria,43U2J@69541|Desulfuromonadales 28221|Deltaproteobacteria J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA prfB - - ko:K02836 - - - - ko00000,ko03012 - - - PCRF,RF-1 WXD2_k127_76040_3 1123388.AQWU01000067_gene633 3.291e-32 130.0 COG0815@1|root,COG0815@2|Bacteria,1WI7B@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus M Transfers the fatty acyl group on membrane lipoproteins lnt - - ko:K03820 - - - - ko00000,ko01000 - GT2 - CN_hydrolase WXD2_k127_783527_1 234267.Acid_2923 3.985e-50 198.0 arCOG02075@1|root,33AGA@2|Bacteria,3Y7D5@57723|Acidobacteria 57723|Acidobacteria S NnrS protein - - - - - - - - - - - - NnrS WXD2_k127_783527_0 1121920.AUAU01000006_gene371 1.921e-54 198.0 COG3945@1|root,COG3945@2|Bacteria 2|Bacteria P hemerythrin HHE cation binding domain - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - - - - - - - - - - Hemerythrin WXD2_k127_783527_2 1121920.AUAU01000008_gene1620 2.324e-46 177.0 COG2010@1|root,COG2010@2|Bacteria 2|Bacteria C Cytochrome c - - - - - - - - - - - iAF987.Gmet_0328 Cytochrom_C,Cytochrome_CBB3 WXD2_k127_784876_0 1123368.AUIS01000027_gene1355 2.745e-243 764.0 COG2192@1|root,COG2192@2|Bacteria,1MWBA@1224|Proteobacteria,1RNN4@1236|Gammaproteobacteria 1236|Gammaproteobacteria O carbamoyl transferase, NodU family - - - ko:K00612 - - - - ko00000,ko01000 - - - Carbam_trans_C,Carbam_trans_N WXD2_k127_784876_1 243233.MCA1168 6.38e-104 349.0 COG0438@1|root,COG0438@2|Bacteria,1MY5T@1224|Proteobacteria,1RS9J@1236|Gammaproteobacteria,1XFU5@135618|Methylococcales 135618|Methylococcales H Glycosyl transferase 4-like domain - - - - - - - - - - - - Glyco_trans_4_4,Glycos_transf_1 WXD2_k127_790766_4 1282361.ABAC402_13560 2.72e-06 54.0 COG2189@1|root,COG2189@2|Bacteria,1MX9M@1224|Proteobacteria,2U066@28211|Alphaproteobacteria 28211|Alphaproteobacteria L dna methylase - - 2.1.1.72 ko:K07316 - - - - ko00000,ko01000,ko02048 - - - N6_N4_Mtase WXD2_k127_790766_0 404380.Gbem_1284 7.486e-79 296.0 COG0457@1|root,COG4796@1|root,COG0457@2|Bacteria,COG4796@2|Bacteria,1QUY7@1224|Proteobacteria,42NBT@68525|delta/epsilon subdivisions,2WKAW@28221|Deltaproteobacteria,43SD0@69541|Desulfuromonadales 28221|Deltaproteobacteria U type II and III secretion system protein pulQ - - ko:K02453 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - Cohesin,Secretin,Secretin_N WXD2_k127_790766_1 204669.Acid345_1998 4.433e-22 104.0 COG2165@1|root,COG2165@2|Bacteria,3Y4RJ@57723|Acidobacteria,2JJB4@204432|Acidobacteriia 204432|Acidobacteriia NU Prokaryotic N-terminal methylation motif - - - ko:K02456 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - N_methyl WXD2_k127_790766_2 204669.Acid345_1999 1.42e-19 96.0 COG2165@1|root,COG2165@2|Bacteria,3Y4ZX@57723|Acidobacteria,2JJN5@204432|Acidobacteriia 204432|Acidobacteriia U Prokaryotic N-terminal methylation motif - - - ko:K02456 ko03070,ko05111,map03070,map05111 M00331 - - ko00000,ko00001,ko00002,ko02044 3.A.15 - - N_methyl WXD2_k127_790766_5 1121127.JAFA01000030_gene2670 0.0001505 51.0 COG2165@1|root,COG2165@2|Bacteria,1MZ5I@1224|Proteobacteria,2VTYM@28216|Betaproteobacteria,1K8M7@119060|Burkholderiaceae 28216|Betaproteobacteria NU Type II secretory pathway, pseudopilin - - - - - - - - - - - - - WXD2_k127_790766_3 1382359.JIAL01000001_gene1447 2.413e-13 72.0 COG0612@1|root,COG0612@2|Bacteria,3Y3M9@57723|Acidobacteria,2JHY4@204432|Acidobacteriia 204432|Acidobacteriia S Belongs to the peptidase M16 family - - - - - - - - - - - - Peptidase_M16,Peptidase_M16_C WXD2_k127_799653_5 246197.MXAN_3837 0.0001764 46.0 COG0457@1|root,COG0664@1|root,COG0457@2|Bacteria,COG0664@2|Bacteria,1N1ZG@1224|Proteobacteria,4336W@68525|delta/epsilon subdivisions,2WYCK@28221|Deltaproteobacteria,2YXD4@29|Myxococcales 28221|Deltaproteobacteria T Cyclic nucleotide-monophosphate binding domain - - - - - - - - - - - - cNMP_binding WXD2_k127_799653_3 1267535.KB906767_gene3957 8.967e-47 176.0 COG0242@1|root,COG0242@2|Bacteria,3Y4HY@57723|Acidobacteria 57723|Acidobacteria J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions def - 3.5.1.88 ko:K01462 - - - - ko00000,ko01000 - - - Pep_deformylase WXD2_k127_799653_4 1108045.GORHZ_229_00170 5.321e-11 74.0 COG0543@1|root,COG1018@1|root,COG0543@2|Bacteria,COG1018@2|Bacteria,2I3N3@201174|Actinobacteria,4GBMD@85026|Gordoniaceae 201174|Actinobacteria C Oxidoreductase FAD-binding domain - - 1.17.1.1,1.18.1.3 ko:K00523,ko:K00529,ko:K02639,ko:K16246 ko00071,ko00195,ko00360,ko00361,ko00362,ko00520,ko00623,ko01100,ko01120,ko01220,map00071,map00195,map00360,map00361,map00362,map00520,map00623,map01100,map01120,map01220 M00545,M00548 R02000,R03391,R03392,R03560,R03608,R06782,R06783,R10042,R10043 RC00046,RC00098,RC00230,RC00490 br01602,ko00000,ko00001,ko00002,ko00194,ko01000 - - - FAD_binding_6,Fer2,NAD_binding_1 WXD2_k127_799653_2 511051.CSE_08210 1.72e-54 209.0 COG1253@1|root,COG1253@2|Bacteria 2|Bacteria E flavin adenine dinucleotide binding gldE - - - - - - - - - - - CBS,CorC_HlyC,DUF21 WXD2_k127_799653_1 1121918.ARWE01000001_gene1263 1.229e-82 285.0 COG1159@1|root,COG1159@2|Bacteria,1MUKT@1224|Proteobacteria,42MUR@68525|delta/epsilon subdivisions,2WJC8@28221|Deltaproteobacteria,43RYG@69541|Desulfuromonadales 28221|Deltaproteobacteria S KH domain era - - ko:K03595 - - - - ko00000,ko03009,ko03029 - - - KH_2,MMR_HSR1 WXD2_k127_799653_0 1123059.KB823013_gene502 3.671e-97 330.0 COG1629@1|root,COG1629@2|Bacteria,1MVSG@1224|Proteobacteria 1224|Proteobacteria P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg WXD2_k127_802354_1 1123368.AUIS01000005_gene382 7.828e-30 128.0 COG0744@1|root,COG0744@2|Bacteria,1QTST@1224|Proteobacteria,1RNHV@1236|Gammaproteobacteria 1236|Gammaproteobacteria M Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) mrcB GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008289,GO:0008360,GO:0008658,GO:0008955,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031406,GO:0031975,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042277,GO:0042546,GO:0042597,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071704,GO:0071723,GO:0071840,GO:0071944,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 2.4.1.129,3.4.16.4 ko:K05365 ko00550,map00550 - R04519 RC00005,RC00049 ko00000,ko00001,ko01000,ko01003,ko01011 - GT51 iECIAI39_1322.ECIAI39_0153,iSBO_1134.SBO_0138,iSbBS512_1146.SbBS512_E0140,iYL1228.KPN_00164 PBP1_TM,Transgly,Transpeptidase,UB2H WXD2_k127_802354_0 404589.Anae109_1344 2.052e-188 612.0 COG3591@1|root,COG3591@2|Bacteria,1MX71@1224|Proteobacteria,437F6@68525|delta/epsilon subdivisions,2X2MS@28221|Deltaproteobacteria,2YTV3@29|Myxococcales 28221|Deltaproteobacteria E Peptidase S46 - - - - - - - - - - - - Peptidase_S46 WXD2_k127_805423_2 1297581.H919_02687 1.06e-81 282.0 COG0564@1|root,COG0564@2|Bacteria,1TPCM@1239|Firmicutes,4HBG2@91061|Bacilli,21VCR@150247|Anoxybacillus 91061|Bacilli J S4 RNA-binding domain rluD GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 ko:K06180 - - - - ko00000,ko01000,ko03009 - - - PseudoU_synth_2,S4 WXD2_k127_805423_0 1121920.AUAU01000029_gene1394 2.076e-142 466.0 COG1972@1|root,COG1972@2|Bacteria,3Y2KI@57723|Acidobacteria 57723|Acidobacteria F PFAM Na dependent nucleoside transporter - - - ko:K03317 - - - - ko00000 2.A.41 - - Gate,Nucleos_tra2_C,Nucleos_tra2_N WXD2_k127_805423_1 1444309.JAQG01000100_gene4706 7.7e-97 325.0 COG0005@1|root,COG0005@2|Bacteria,1TQ37@1239|Firmicutes,4HABP@91061|Bacilli,26TPG@186822|Paenibacillaceae 91061|Bacilli F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate punA - 2.4.2.1,2.4.2.28 ko:K00772,ko:K03783 ko00230,ko00240,ko00270,ko00760,ko01100,ko01110,map00230,map00240,map00270,map00760,map01100,map01110 M00034 R01402,R01561,R01863,R01969,R02147,R02294,R02295,R02297,R02484,R02557,R02748,R08368,R10244 RC00033,RC00063,RC00122,RC02819 ko00000,ko00001,ko00002,ko01000 - - - PNP_UDP_1 WXD2_k127_805423_3 1267535.KB906767_gene224 5.407e-63 224.0 COG0745@1|root,COG0745@2|Bacteria,3Y4D1@57723|Acidobacteria,2JMC0@204432|Acidobacteriia 204432|Acidobacteriia T Transcriptional regulatory protein, C terminal - - - - - - - - - - - - Response_reg,Trans_reg_C WXD2_k127_819645_0 913325.N799_06400 5.709e-113 380.0 COG1301@1|root,COG1301@2|Bacteria,1MU0Q@1224|Proteobacteria,1RMEN@1236|Gammaproteobacteria,1X37F@135614|Xanthomonadales 135614|Xanthomonadales U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family gltP - - ko:K03309 - - - - ko00000 2.A.23 - - SDF WXD2_k127_819645_3 58123.JOFJ01000006_gene221 6.548e-23 99.0 COG3360@1|root,COG3360@2|Bacteria,2IQ6Z@201174|Actinobacteria,4EK7T@85012|Streptosporangiales 201174|Actinobacteria S Dodecin - - - ko:K09165 - - - - ko00000 - - - Dodecin WXD2_k127_819645_2 401053.AciPR4_3882 6.761e-49 188.0 COG0860@1|root,COG0860@2|Bacteria,3Y3M0@57723|Acidobacteria,2JI9V@204432|Acidobacteriia 204432|Acidobacteriia M Ami_3 - - 3.5.1.28 ko:K01448 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 - - - AMIN,Amidase_3 WXD2_k127_819645_1 1142394.PSMK_08370 5.165e-87 301.0 COG1077@1|root,COG1077@2|Bacteria 2|Bacteria D Cell shape determining protein MreB Mrl mreB2 - - ko:K03569 - - - - ko00000,ko02048,ko03036,ko04812 1.A.33.1,9.B.157.1 - - MreB_Mbl WXD2_k127_832442_2 717605.Theco_3718 1.112e-44 165.0 COG0193@1|root,COG0193@2|Bacteria,1V3NB@1239|Firmicutes,4HH2Z@91061|Bacilli,26QYM@186822|Paenibacillaceae 91061|Bacilli J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis pth GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 ko:K01056 - - - - ko00000,ko01000,ko03012 - - - Pept_tRNA_hydro WXD2_k127_832442_3 177437.HRM2_43560 7.433e-43 171.0 COG2208@1|root,COG3437@1|root,COG2208@2|Bacteria,COG3437@2|Bacteria,1N4K5@1224|Proteobacteria,42T2F@68525|delta/epsilon subdivisions,2WPGM@28221|Deltaproteobacteria,2MKRM@213118|Desulfobacterales 28221|Deltaproteobacteria KT Sigma factor PP2C-like phosphatases - - 3.1.3.3 ko:K07315 - - - - ko00000,ko01000,ko03021 - - - Response_reg,SpoIIE WXD2_k127_832442_5 1382358.JHVN01000001_gene1077 4.911e-08 63.0 2ASQ0@1|root,31I4U@2|Bacteria,1VZD6@1239|Firmicutes 1239|Firmicutes - - - - - - - - - - - - - - - WXD2_k127_832442_1 983917.RGE_34760 2.852e-58 209.0 COG0187@1|root,COG0187@2|Bacteria,1MVH1@1224|Proteobacteria,2VHBQ@28216|Betaproteobacteria,1KJW7@119065|unclassified Burkholderiales 28216|Betaproteobacteria L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule parE - - ko:K02622 - - - - ko00000,ko01000,ko02048,ko03032,ko03036 - - - DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim WXD2_k127_832442_0 864051.BurJ1DRAFT_2816 1.635e-72 252.0 COG1670@1|root,COG1670@2|Bacteria,1PDMH@1224|Proteobacteria,2VS7P@28216|Betaproteobacteria 28216|Betaproteobacteria J Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_3 WXD2_k127_832442_4 1038859.AXAU01000010_gene1733 1.657e-21 103.0 COG3622@1|root,COG3622@2|Bacteria,1MV53@1224|Proteobacteria,2TSVI@28211|Alphaproteobacteria,3JUFW@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria G Xylose isomerase-like TIM barrel hyi - 5.3.1.22 ko:K01816 ko00630,ko01100,map00630,map01100 - R01394 RC00511 ko00000,ko00001,ko01000 - - - AP_endonuc_2 WXD2_k127_85059_3 1121468.AUBR01000021_gene2827 5.674e-40 160.0 COG1640@1|root,COG1640@2|Bacteria,1W5VQ@1239|Firmicutes,25E46@186801|Clostridia,42FUX@68295|Thermoanaerobacterales 186801|Clostridia G 4-alpha-glucanotransferase malQ - 2.4.1.25 ko:K00705 ko00500,ko01100,map00500,map01100 - R05196 RC00049 ko00000,ko00001,ko01000 - GH77 - Glyco_hydro_77 WXD2_k127_85059_2 264462.Bd2635 2.622e-71 252.0 COG1975@1|root,COG1975@2|Bacteria,1R3RT@1224|Proteobacteria,43BHQ@68525|delta/epsilon subdivisions,2MTVP@213481|Bdellovibrionales,2X6W7@28221|Deltaproteobacteria 213481|Bdellovibrionales O XdhC Rossmann domain pcmU - - ko:K07402 - - - - ko00000 - - - XdhC_C,XdhC_CoxI WXD2_k127_85059_0 1254432.SCE1572_35000 1.727e-155 501.0 COG0044@1|root,COG0044@2|Bacteria,1MW10@1224|Proteobacteria,42RF2@68525|delta/epsilon subdivisions,2WP05@28221|Deltaproteobacteria,2YWCM@29|Myxococcales 28221|Deltaproteobacteria F Amidohydrolase family allB - 3.5.2.5 ko:K01466 ko00230,ko01100,ko01120,map00230,map01100,map01120 M00546 R02425 RC00680 ko00000,ko00001,ko00002,ko01000 - - - Amidohydro_1 WXD2_k127_85059_1 1254432.SCE1572_35005 5.4e-103 347.0 COG3195@1|root,COG4266@1|root,COG3195@2|Bacteria,COG4266@2|Bacteria,1MXJK@1224|Proteobacteria,42YE0@68525|delta/epsilon subdivisions,2X30N@28221|Deltaproteobacteria,2YTWS@29|Myxococcales 28221|Deltaproteobacteria F Belongs to the allantoicase family alc - 3.5.3.4 ko:K01477 ko00230,ko01100,ko01120,map00230,map01100,map01120 M00546 R02422 RC00379,RC00712 ko00000,ko00001,ko00002,ko01000 - - - Allantoicase,OHCU_decarbox WXD2_k127_854545_1 929556.Solca_0050 5.453e-139 475.0 COG1470@1|root,COG3209@1|root,COG4932@1|root,COG1470@2|Bacteria,COG3209@2|Bacteria,COG4932@2|Bacteria,4PKBQ@976|Bacteroidetes,1J0N1@117747|Sphingobacteriia 976|Bacteroidetes M conserved repeat domain protein - - - - - - - - - - - - CHU_C,Calx-beta,DUF11,SprB WXD2_k127_854545_0 635013.TherJR_0997 1.809e-147 503.0 COG0395@1|root,COG5001@1|root,COG5002@1|root,COG0395@2|Bacteria,COG5001@2|Bacteria,COG5002@2|Bacteria,1TP8V@1239|Firmicutes,247PX@186801|Clostridia,26021@186807|Peptococcaceae 186801|Clostridia T Diguanylate cyclase - - - - - - - - - - - - EAL,GGDEF,PAS,PAS_8,PAS_9 WXD2_k127_854545_3 234267.Acid_5626 1.594e-09 70.0 COG5549@1|root,COG5549@2|Bacteria 234267.Acid_5626|- O protein import - - - - - - - - - - - - - WXD2_k127_854545_2 455436.DS989812_gene1199 1.271e-15 89.0 COG2931@1|root,COG2931@2|Bacteria,1MU7T@1224|Proteobacteria,1RNK8@1236|Gammaproteobacteria,46A95@72275|Alteromonadaceae 1236|Gammaproteobacteria Q Haemolysin-type calcium-binding repeat (2 copies) - - 3.4.24.40 ko:K01406 ko01503,map01503 - - - ko00000,ko00001,ko01000,ko01002 - - - HCBP_related,He_PIG,HemolysinCabind WXD2_k127_855733_1 485913.Krac_4279 1.443e-169 555.0 COG1028@1|root,COG3347@1|root,COG1028@2|Bacteria,COG3347@2|Bacteria,2G8BR@200795|Chloroflexi 200795|Chloroflexi IQ TIGRFAM rhamnulose-1-phosphate aldolase alcohol dehydrogenase - - - - - - - - - - - - Aldolase_II,adh_short_C2 WXD2_k127_855733_3 1009370.ALO_01789 3.639e-135 439.0 COG1814@1|root,COG1814@2|Bacteria,1UQWP@1239|Firmicutes,4H8S9@909932|Negativicutes 909932|Negativicutes S VIT family - - - - - - - - - - - - VIT1 WXD2_k127_855733_6 479432.Sros_6702 1.532e-09 69.0 COG0666@1|root,COG1413@1|root,COG0666@2|Bacteria,COG1413@2|Bacteria,2I9YH@201174|Actinobacteria,4EFI0@85012|Streptosporangiales 201174|Actinobacteria C Ankyrin repeats (3 copies) - - - - - - - - - - - - Ank_2,Ank_4,HEAT_2 WXD2_k127_855733_5 404589.Anae109_2248 3.653e-50 188.0 COG1321@1|root,COG1918@1|root,COG1321@2|Bacteria,COG1918@2|Bacteria,1N3ZM@1224|Proteobacteria,42TUU@68525|delta/epsilon subdivisions,2WQ8Z@28221|Deltaproteobacteria 28221|Deltaproteobacteria KP PFAM iron dependent repressor ideR - - ko:K03709 - - - - ko00000,ko03000 - - - Fe_dep_repr_C,FeoA WXD2_k127_855733_0 404589.Anae109_2250 2.371e-188 610.0 COG0370@1|root,COG0370@2|Bacteria,1MUZC@1224|Proteobacteria,42PVA@68525|delta/epsilon subdivisions,2WJ10@28221|Deltaproteobacteria 28221|Deltaproteobacteria P transporter of a GTP-driven Fe(2 ) uptake system feoB-1 - - ko:K04759 - - - - ko00000,ko02000 9.A.8.1 - - FeoB_C,FeoB_N,Gate WXD2_k127_855733_2 1121920.AUAU01000016_gene1289 3.509e-135 450.0 COG0674@1|root,COG1014@1|root,COG0674@2|Bacteria,COG1014@2|Bacteria 2|Bacteria C Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin - - 1.2.7.11,1.2.7.3 ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - PFOR_II,POR,POR_N,Transketolase_C WXD2_k127_855733_4 670487.Ocepr_1224 8.717e-82 288.0 COG1013@1|root,COG1013@2|Bacteria,1WIGM@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus C TIGRFAM 2-oxoacid acceptor oxidoreductase, beta subunit, pyruvate 2-ketoisovalerate family - - 1.2.7.11,1.2.7.3 ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - PFO_beta_C,TPP_enzyme_C WXD2_k127_867097_3 903818.KI912268_gene2794 1.77e-19 96.0 COG0195@1|root,COG0195@2|Bacteria,3Y379@57723|Acidobacteria 57723|Acidobacteria K Participates in both transcription termination and antitermination nusA - - ko:K02600 - - - - ko00000,ko03009,ko03021 - - - HHH_5,KH_5,NusA_N,S1 WXD2_k127_867097_0 234267.Acid_5181 4.254e-205 672.0 COG0532@1|root,COG3266@1|root,COG0532@2|Bacteria,COG3266@2|Bacteria,3Y3UG@57723|Acidobacteria 57723|Acidobacteria J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex infB - - ko:K02519 - - - - ko00000,ko03012,ko03029 - - - GTP_EFTU,GTP_EFTU_D2,IF-2,IF2_N WXD2_k127_867097_5 1278307.KB907040_gene1962 1.161e-13 76.0 COG1550@1|root,COG1550@2|Bacteria,1NGDU@1224|Proteobacteria 1224|Proteobacteria S Protein of unknown function (DUF503) - - - ko:K09764 - - - - ko00000 - - - DUF503 WXD2_k127_867097_4 635013.TherJR_1378 1.411e-15 82.0 COG0858@1|root,COG0858@2|Bacteria,1VA0P@1239|Firmicutes,24MPB@186801|Clostridia,262H0@186807|Peptococcaceae 186801|Clostridia J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA rbfA - - ko:K02834 - - - - ko00000,ko03009 - - - RBFA WXD2_k127_867097_2 1131269.AQVV01000014_gene208 9.171e-59 209.0 COG1949@1|root,COG1949@2|Bacteria 2|Bacteria L 3'-to-5' exoribonuclease specific for small oligoribonucleotides orn GO:0000175,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004532,GO:0004536,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008297,GO:0008310,GO:0008408,GO:0008946,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0016896,GO:0019439,GO:0034611,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140097,GO:0140098,GO:1901360,GO:1901361,GO:1901575 - ko:K13288 ko03008,map03008 - - - ko00000,ko00001,ko01000,ko03009,ko03019 - - - RNase_T WXD2_k127_867097_1 234267.Acid_6299 1.457e-63 230.0 COG0130@1|root,COG0130@2|Bacteria,3Y3PG@57723|Acidobacteria 57723|Acidobacteria J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs truB - 5.4.99.25 ko:K03177 - - - - ko00000,ko01000,ko03016 - - - TruB_C_2,TruB_N WXD2_k127_875177_2 1347392.CCEZ01000043_gene563 6.891e-104 358.0 COG0608@1|root,COG0608@2|Bacteria,1TPXE@1239|Firmicutes,247NU@186801|Clostridia,36EVY@31979|Clostridiaceae 186801|Clostridia L Single-stranded-DNA-specific exonuclease RecJ recJ - - ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DHH,DHHA1 WXD2_k127_875177_1 316067.Geob_3292 2.543e-106 353.0 COG0825@1|root,COG0825@2|Bacteria,1MURN@1224|Proteobacteria,42NC2@68525|delta/epsilon subdivisions,2WKA3@28221|Deltaproteobacteria,43UDE@69541|Desulfuromonadales 28221|Deltaproteobacteria I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA accA - 2.1.3.15,6.4.1.2 ko:K01962,ko:K01963 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04386 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 - - - ACCA WXD2_k127_875177_0 240015.ACP_0611 6.128e-154 504.0 COG1198@1|root,COG1198@2|Bacteria,3Y2NY@57723|Acidobacteria,2JI1K@204432|Acidobacteriia 204432|Acidobacteriia L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA priA - - ko:K04066 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C,ResIII WXD2_k127_881943_0 1116472.MGMO_44c00170 6.335e-101 333.0 COG0008@1|root,COG0008@2|Bacteria,1MUC8@1224|Proteobacteria,1RQ7G@1236|Gammaproteobacteria,1XEMX@135618|Methylococcales 135618|Methylococcales J Glutamyl glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain glnS - 6.1.1.18 ko:K01886 ko00970,ko01100,map00970,map01100 M00359,M00360 R03652 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_1c,tRNA-synt_1c_C WXD2_k127_881943_5 1047013.AQSP01000073_gene1092 5.446e-06 59.0 COG1305@1|root,COG3391@1|root,COG1305@2|Bacteria,COG3391@2|Bacteria,2NQ2D@2323|unclassified Bacteria 2|Bacteria E Transglutaminase/protease-like homologues - - 3.4.24.40 ko:K01406 ko01503,map01503 - - - ko00000,ko00001,ko01000,ko01002 - - - Transglut_core WXD2_k127_881943_2 349163.Acry_2098 9.195e-58 218.0 COG0515@1|root,COG0515@2|Bacteria,1MV1P@1224|Proteobacteria,2VF7J@28211|Alphaproteobacteria,2JRGK@204441|Rhodospirillales 204441|Rhodospirillales KLT Protein tyrosine kinase - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - DUF4384,Pkinase WXD2_k127_881943_3 195253.Syn6312_3280 3.687e-37 154.0 2DV15@1|root,33TGW@2|Bacteria,1GC8U@1117|Cyanobacteria,1H0PG@1129|Synechococcus 1117|Cyanobacteria - - - - - - - - - - - - - - - WXD2_k127_881943_1 1121946.AUAX01000007_gene2988 2.385e-92 318.0 COG3268@1|root,COG3268@2|Bacteria,2GNGH@201174|Actinobacteria,4DDJB@85008|Micromonosporales 201174|Actinobacteria S Saccharopine dehydrogenase - - 1.5.1.7 ko:K00290 ko00300,ko00310,ko01100,ko01110,ko01130,ko01230,map00300,map00310,map01100,map01110,map01130,map01230 M00030,M00032 R00715 RC00217,RC01532 ko00000,ko00001,ko00002,ko01000 - - - Sacchrp_dh_NADP WXD2_k127_881943_4 1123278.KB893388_gene5743 2.265e-07 54.0 29XWU@1|root,30JP9@2|Bacteria,4NNWG@976|Bacteroidetes,47PSI@768503|Cytophagia 976|Bacteroidetes - - - - - - - - - - - - - - - WXD2_k127_89332_0 156889.Mmc1_0241 5.073e-84 291.0 COG2172@1|root,COG3437@1|root,COG2172@2|Bacteria,COG3437@2|Bacteria,1QWD9@1224|Proteobacteria,2TWV8@28211|Alphaproteobacteria 28211|Alphaproteobacteria T Histidine kinase-like ATPase domain - - - - - - - - - - - - HATPase_c_2,Response_reg WXD2_k127_89332_1 1123242.JH636436_gene370 2.638e-83 302.0 COG0457@1|root,COG3119@1|root,COG0457@2|Bacteria,COG3119@2|Bacteria,2J3IX@203682|Planctomycetes 203682|Planctomycetes P arylsulfatase A - - - - - - - - - - - - Sulfatase,TPR_16,TPR_19,TPR_2 WXD2_k127_895926_5 479434.Sthe_0041 3.356e-29 135.0 COG0241@1|root,COG0241@2|Bacteria,2G6V8@200795|Chloroflexi,27Z4Y@189775|Thermomicrobia 189775|Thermomicrobia E Polynucleotide kinase 3 phosphatase - - 3.1.3.82,3.1.3.83 ko:K03273 ko00540,ko01100,map00540,map01100 M00064 R05647,R09771 RC00017 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Hydrolase_like WXD2_k127_895926_1 469383.Cwoe_5469 3.815e-86 288.0 COG0279@1|root,COG0279@2|Bacteria,2GPPZ@201174|Actinobacteria 201174|Actinobacteria G SIS domain - - 5.3.1.28 ko:K03271 ko00540,ko01100,map00540,map01100 M00064 R05645,R09768,R09769 RC00434 ko00000,ko00001,ko00002,ko01000,ko01005 - - - SIS_2 WXD2_k127_895926_0 234267.Acid_4352 3.448e-124 419.0 COG1215@1|root,COG2227@1|root,COG1215@2|Bacteria,COG2227@2|Bacteria 2|Bacteria H 3-demethylubiquinone-9 3-O-methyltransferase activity - - - ko:K07011,ko:K20444 - - - - ko00000,ko01000,ko01005,ko02000 4.D.1.3 GT2,GT4 - Glycos_transf_2,Methyltransf_23 WXD2_k127_895926_7 1120960.ATXG01000010_gene2627 0.0003981 53.0 COG4485@1|root,COG4485@2|Bacteria,2HT0R@201174|Actinobacteria,4FRGS@85023|Microbacteriaceae 201174|Actinobacteria S Bacterial membrane protein, YfhO - - - - - - - - - - - - - WXD2_k127_895926_4 697282.Mettu_4192 2.824e-39 149.0 2DMJC@1|root,32RYJ@2|Bacteria,1RGW8@1224|Proteobacteria,1S6NK@1236|Gammaproteobacteria,1XGJF@135618|Methylococcales 135618|Methylococcales S Domain of unknown function (DUF4186) - - - - - - - - - - - - DUF4186 WXD2_k127_895926_3 234267.Acid_7129 7.109e-55 194.0 COG0662@1|root,COG0662@2|Bacteria,3Y5D0@57723|Acidobacteria 57723|Acidobacteria G Cupin 2, conserved barrel domain protein - - - - - - - - - - - - - WXD2_k127_895926_2 93220.LV28_03815 1.769e-80 278.0 COG2423@1|root,COG2423@2|Bacteria,1MWH6@1224|Proteobacteria,2WFNZ@28216|Betaproteobacteria,1KI4E@119060|Burkholderiaceae 28216|Betaproteobacteria E Ornithine cyclodeaminase/mu-crystallin family - - - - - - - - - - - - OCD_Mu_crystall WXD2_k127_895926_6 1183438.GKIL_1413 1.084e-24 119.0 28N8A@1|root,2ZBCR@2|Bacteria,1G2Q6@1117|Cyanobacteria 1117|Cyanobacteria - - - - - - - - - - - - - - - WXD2_k127_897693_0 1121406.JAEX01000001_gene84 2.209e-147 478.0 COG0021@1|root,COG0021@2|Bacteria,1MUEY@1224|Proteobacteria,42M80@68525|delta/epsilon subdivisions,2WINJ@28221|Deltaproteobacteria,2M9FP@213115|Desulfovibrionales 28221|Deltaproteobacteria G PFAM Transketolase - - 2.2.1.1 ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R01067,R01641,R01830,R06590 RC00032,RC00226,RC00571,RC01560 ko00000,ko00001,ko00002,ko01000 - - - Transket_pyr,Transketolase_C,Transketolase_N WXD2_k127_897693_7 1121289.JHVL01000007_gene2716 1.363e-18 100.0 COG2244@1|root,COG2244@2|Bacteria 2|Bacteria S polysaccharide biosynthetic process - - - - - - - - - - - - Polysacc_synt,Polysacc_synt_3,Polysacc_synt_C WXD2_k127_897693_6 331869.BAL199_21539 4.587e-29 127.0 COG2520@1|root,COG2520@2|Bacteria,1MZTC@1224|Proteobacteria,2UE8C@28211|Alphaproteobacteria,4BSBW@82117|unclassified Alphaproteobacteria 28211|Alphaproteobacteria J Methyltransferase FkbM domain - - - - - - - - - - - - Methyltransf_21 WXD2_k127_897693_5 316055.RPE_4240 5.19e-41 157.0 COG1778@1|root,COG1778@2|Bacteria,1RH85@1224|Proteobacteria 1224|Proteobacteria M Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate - - 2.7.7.43,2.7.7.92,3.1.3.45 ko:K03270,ko:K21749 ko00520,ko00540,ko01100,map00520,map00540,map01100 M00063 R01117,R03350,R04215 RC00017,RC00152 ko00000,ko00001,ko00002,ko01000,ko01005 - - - CTP_transf_3,Hydrolase,Hydrolase_3 WXD2_k127_897693_1 1121456.ATVA01000015_gene2453 8.507e-128 435.0 COG2089@1|root,COG2089@2|Bacteria,1MWG3@1224|Proteobacteria,42YAT@68525|delta/epsilon subdivisions,2WU5Y@28221|Deltaproteobacteria,2M8Q1@213115|Desulfovibrionales 28221|Deltaproteobacteria M SAF - - - - - - - - - - - - NeuB,SAF WXD2_k127_897693_2 929713.NIASO_01455 7.865e-127 421.0 COG0037@1|root,COG0037@2|Bacteria,4NIZR@976|Bacteroidetes,1IZJG@117747|Sphingobacteriia 976|Bacteroidetes D LPS biosynthesis protein - - - - - - - - - - - - NAD_synthase WXD2_k127_897693_3 1439940.BAY1663_03575 5.625e-71 252.0 COG0107@1|root,COG0107@2|Bacteria,1RA6Q@1224|Proteobacteria,1RYJV@1236|Gammaproteobacteria 1236|Gammaproteobacteria E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit - - - - - - - - - - - - His_biosynth WXD2_k127_897693_4 123899.JPQP01000021_gene3656 5.734e-62 221.0 COG0118@1|root,COG0118@2|Bacteria,1MU4X@1224|Proteobacteria,2W2FN@28216|Betaproteobacteria,3T57U@506|Alcaligenaceae 28216|Betaproteobacteria E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR - - - ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04558 RC00010,RC01190,RC01943 ko00000,ko00001,ko00002,ko01000 - - - GATase WXD2_k127_903982_2 215803.DB30_3931 9.584e-36 149.0 COG1719@1|root,COG1719@2|Bacteria 2|Bacteria KT 4-vinyl reductase, 4VR - - - - - - - - - - - - HNOB WXD2_k127_903982_0 670307.HYPDE_38393 1.693e-143 480.0 COG0446@1|root,COG2146@1|root,COG0446@2|Bacteria,COG2146@2|Bacteria,1NR3M@1224|Proteobacteria,2TS0K@28211|Alphaproteobacteria 28211|Alphaproteobacteria P Pyridine nucleotide-disulphide oxidoreductase - - 1.18.1.1 ko:K05297 ko00071,map00071 - R02000 - ko00000,ko00001,ko01000 - - - Pyr_redox_2,Pyr_redox_dim,Reductase_C,Rieske WXD2_k127_903982_3 1366050.N234_35555 6.545e-24 106.0 COG3794@1|root,COG3794@2|Bacteria,1RI9G@1224|Proteobacteria,2VX9Q@28216|Betaproteobacteria,1KA54@119060|Burkholderiaceae 28216|Betaproteobacteria C Copper binding proteins, plastocyanin/azurin family - - - - - - - - - - - - Copper-bind,Cupredoxin_1 WXD2_k127_903982_1 944435.AXAJ01000007_gene1508 4.363e-57 205.0 COG3652@1|root,COG3652@2|Bacteria,1RDPI@1224|Proteobacteria,2VRQA@28216|Betaproteobacteria,1K202@119060|Burkholderiaceae 28216|Betaproteobacteria S Domain of unknown function (DUF4142) - - - ko:K08995 - - - - ko00000 - - - DUF4142 WXD2_k127_903982_4 706587.Desti_0426 2.329e-18 89.0 COG0057@1|root,COG0057@2|Bacteria,1MU93@1224|Proteobacteria,42N9Q@68525|delta/epsilon subdivisions,2WIK1@28221|Deltaproteobacteria,2MRGN@213462|Syntrophobacterales 28221|Deltaproteobacteria C Belongs to the glyceraldehyde-3-phosphate dehydrogenase family - - 1.2.1.12 ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01061 RC00149 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 - - - Gp_dh_C,Gp_dh_N WXD2_k127_921639_3 2002.JOEQ01000003_gene2490 3.368e-42 156.0 COG0031@1|root,COG0031@2|Bacteria,2GIXE@201174|Actinobacteria,4EI60@85012|Streptosporangiales 201174|Actinobacteria EK Pyridoxal-phosphate dependent enzyme - - 2.5.1.47 ko:K01738 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 M00021 R00897,R03601,R04859 RC00020,RC02814,RC02821 ko00000,ko00001,ko00002,ko01000 - - - PALP WXD2_k127_921639_0 1128421.JAGA01000002_gene879 2.529e-175 567.0 COG0318@1|root,COG0318@2|Bacteria,2NPH9@2323|unclassified Bacteria 2|Bacteria IQ COGs COG0318 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II fadD - 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding,AMP-binding_C WXD2_k127_921639_2 404589.Anae109_2807 1.831e-58 206.0 COG0346@1|root,COG0346@2|Bacteria,1MZD3@1224|Proteobacteria,434M2@68525|delta/epsilon subdivisions,2X8XQ@28221|Deltaproteobacteria,2Z0XI@29|Myxococcales 28221|Deltaproteobacteria E Glyoxalase-like domain - - - ko:K08234 - - - - ko00000 - - - Glyoxalase WXD2_k127_921639_1 1121920.AUAU01000005_gene1020 2.136e-128 424.0 COG4805@1|root,COG4805@2|Bacteria 2|Bacteria S Bacterial protein of unknown function (DUF885) - - - - - - - - - - - - - WXD2_k127_925318_4 543728.Vapar_3604 6.263e-08 54.0 2DMYT@1|root,32UF9@2|Bacteria,1N01P@1224|Proteobacteria,2VUE2@28216|Betaproteobacteria,4AF48@80864|Comamonadaceae 28216|Betaproteobacteria S SPW repeat - - - - - - - - - - - - SPW WXD2_k127_925318_1 1519464.HY22_12840 1.357e-45 192.0 COG1572@1|root,COG1572@2|Bacteria 2|Bacteria NU bacterial-type flagellum-dependent cell motility - - - - - - - - - - - - CARDB,FlgD_ig,ILEI,Peptidase_C25,Propeptide_C25 WXD2_k127_925318_2 1353528.DT23_16735 4.414e-11 78.0 COG1361@1|root,COG1361@2|Bacteria,1R5G4@1224|Proteobacteria,2UC86@28211|Alphaproteobacteria 28211|Alphaproteobacteria M TIGRFAM conserved repeat domain - - - - - - - - - - - - DUF11,SdrD_B WXD2_k127_925318_0 251229.Chro_0372 3.786e-47 197.0 COG1361@1|root,COG2931@1|root,COG4932@1|root,COG1361@2|Bacteria,COG2931@2|Bacteria,COG4932@2|Bacteria,1GQTI@1117|Cyanobacteria,3VN50@52604|Pleurocapsales 1117|Cyanobacteria M Domain of unknown function DUF11 - - - - - - - - - - - - DUF11 WXD2_k127_925318_3 1463920.JOGB01000047_gene3032 6.189e-10 69.0 COG2931@1|root,COG3209@1|root,COG3391@1|root,COG2931@2|Bacteria,COG3209@2|Bacteria,COG3391@2|Bacteria 2|Bacteria CO amine dehydrogenase activity - - - ko:K20276 ko02024,map02024 - - - ko00000,ko00001 - - - ALF,LRR_5,PT-HINT,Ricin_B_lectin,VCBS,fn3 WXD2_k127_932883_0 864069.MicloDRAFT_00060470 0.0 1326.0 COG0178@1|root,COG0178@2|Bacteria,1MX79@1224|Proteobacteria,2TTXN@28211|Alphaproteobacteria,1JT9I@119045|Methylobacteriaceae 28211|Alphaproteobacteria L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate - - - ko:K03701 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - ABC_tran WXD2_k127_970582_1 1123508.JH636441_gene3483 1.404e-114 385.0 COG4870@1|root,COG4870@2|Bacteria,2J26I@203682|Planctomycetes 203682|Planctomycetes O Belongs to the peptidase C1 family - - - - - - - - - - - - - WXD2_k127_970582_0 765420.OSCT_3186 3.733e-173 575.0 COG4995@1|root,COG4995@2|Bacteria,2G8YF@200795|Chloroflexi,377C0@32061|Chloroflexia 32061|Chloroflexia P CHAT domain - - - - - - - - - - - - CHAT,SIR2_2 WXD2_k127_970582_2 765420.OSCT_3185 5.527e-113 404.0 COG1672@1|root,COG2319@1|root,COG1672@2|Bacteria,COG2319@2|Bacteria,2G86V@200795|Chloroflexi,374S2@32061|Chloroflexia 32061|Chloroflexia KLT WD-40 repeat protein - - - - - - - - - - - - NB-ARC,WD40 WXD2_k127_970582_4 330214.NIDE2212 1.099e-26 125.0 COG1075@1|root,COG4995@1|root,COG1075@2|Bacteria,COG4995@2|Bacteria 2|Bacteria S CHAT domain - - - - - - - - - - - - CHAT,NB-ARC,TIR_2,TPR_12 WXD2_k127_970582_3 114615.BRADO1242 1.109e-59 223.0 COG4249@1|root,COG4249@2|Bacteria 2|Bacteria S B-1 B cell differentiation - - - - - - - - - - - - GUN4,Peptidase_C14 WXD2_k127_98298_2 1408444.JHYC01000017_gene1989 4.03e-69 236.0 COG1858@1|root,COG1858@2|Bacteria,1N4E1@1224|Proteobacteria,1RP99@1236|Gammaproteobacteria,1JDS5@118969|Legionellales 118969|Legionellales P Cytochrome c hsc - - - - - - - - - - - - WXD2_k127_98298_3 1297742.A176_01253 5.591e-24 109.0 2A865@1|root,30X71@2|Bacteria,1RE6C@1224|Proteobacteria,4384S@68525|delta/epsilon subdivisions,2X3EU@28221|Deltaproteobacteria,2YVRE@29|Myxococcales 28221|Deltaproteobacteria - - - - - - - - - - - - - - - WXD2_k127_98298_1 215803.DB30_7443 5.189e-197 635.0 COG2268@1|root,COG2268@2|Bacteria,1P50K@1224|Proteobacteria,42PJG@68525|delta/epsilon subdivisions,2WQ9J@28221|Deltaproteobacteria,2YTWK@29|Myxococcales 28221|Deltaproteobacteria S Band 7 protein - - - ko:K07192 ko04910,map04910 - - - ko00000,ko00001,ko03036,ko04131,ko04147 - - - Band_7,Flot WXD2_k127_98298_0 1242864.D187_007714 0.0 1693.0 COG0714@1|root,COG0714@2|Bacteria,1NSN5@1224|Proteobacteria,437FG@68525|delta/epsilon subdivisions,2X2N3@28221|Deltaproteobacteria,2YTXE@29|Myxococcales 28221|Deltaproteobacteria D ATPase involved in DNA repair - - - - - - - - - - - - AAA,DUF3686 ## 3059 queries scanned ## Total time (seconds): 11.547654151916504 ## Rate: 264.90 q/s