## Mon Mar 17 21:20:10 2025 ## emapper-2.1.9 ## /home/zhangkaihang/.conda/envs/eggnog-mapper/bin/emapper.py -i /home/zhangkaihang/metadata_analysis/metawrap/paddysoil/4paddy/bin4gtdbtk/YYD2_bin.10.fa -m mmseqs --itype genome -o YYD2_bin.10 --output_dir /home/zhangkaihang/metadata_analysis/eggnog-mapper/paddysoil/4paddy/YYD2_bin.10 --cpu 8 ## #query seed_ortholog evalue score eggNOG_OGs max_annot_lvl COG_category Description Preferred_name GOs EC KEGG_ko KEGG_Pathway KEGG_Module KEGG_Reaction KEGG_rclass BRITE KEGG_TC CAZy BiGG_Reaction PFAMs YYD2_k127_1003039_2 1216932.CM240_3316 8.078e-09 66.0 COG1388@1|root,COG3757@1|root,COG1388@2|Bacteria,COG3757@2|Bacteria,1V484@1239|Firmicutes,24A8T@186801|Clostridia,36FZK@31979|Clostridiaceae 186801|Clostridia M family 25 lyc2 GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.2.1.17 ko:K01185,ko:K07273 - - - - ko00000,ko01000 - - - CW_binding_1,Glyco_hydro_25,LysM,PG_binding_1,SH3_3 YYD2_k127_1003039_1 926569.ANT_13230 1.219e-19 93.0 COG0268@1|root,COG0268@2|Bacteria,2G7AK@200795|Chloroflexi 200795|Chloroflexi J Binds directly to 16S ribosomal RNA rpsT - - ko:K02968 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S20p YYD2_k127_1003039_0 926569.ANT_13220 2.259e-232 733.0 COG0018@1|root,COG0018@2|Bacteria,2G6DK@200795|Chloroflexi 200795|Chloroflexi J Arginyl-tRNA synthetase argS GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 ko:K01887 ko00970,map00970 M00359,M00360 R03646 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - Arg_tRNA_synt_N,DALR_1,tRNA-synt_1d YYD2_k127_1013094_1 485913.Krac_12092 6.73e-221 692.0 COG4799@1|root,COG4799@2|Bacteria,2G5IX@200795|Chloroflexi 200795|Chloroflexi I PFAM carboxyl transferase - - 2.1.3.15,6.4.1.3 ko:K01966 ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200 M00373,M00741 R01859 RC00097,RC00609 ko00000,ko00001,ko00002,ko01000 - - - Carboxyl_trans YYD2_k127_1013094_0 926569.ANT_17670 3.877e-231 724.0 COG0606@1|root,COG0606@2|Bacteria,2G65P@200795|Chloroflexi 200795|Chloroflexi O PFAM magnesium chelatase ChlI subunit - - - ko:K07391 - - - - ko00000 - - - ChlI,Mg_chelatase,Mg_chelatase_C YYD2_k127_1013094_4 1499967.BAYZ01000036_gene2414 5.637e-33 132.0 2BK9M@1|root,32EPT@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - YYD2_k127_1013094_2 1499967.BAYZ01000038_gene2261 7.708e-97 320.0 COG0705@1|root,COG0705@2|Bacteria,2NPGI@2323|unclassified Bacteria 2|Bacteria S (Rhomboid) family - - - - - - - - - - - - Rhomboid YYD2_k127_1013094_3 234267.Acid_0752 2.157e-40 153.0 COG0517@1|root,COG0517@2|Bacteria,3Y8IB@57723|Acidobacteria 57723|Acidobacteria S Domain in cystathionine beta-synthase and other proteins. - - - - - - - - - - - - CBS YYD2_k127_1015093_2 926569.ANT_06480 4.846e-11 66.0 COG0381@1|root,COG0381@2|Bacteria 2|Bacteria M UDP-N-acetylglucosamine 2-epimerase activity - - - - - - - - - - - - - YYD2_k127_1015093_0 694427.Palpr_0130 1.194e-128 427.0 COG1233@1|root,COG1233@2|Bacteria,4NF7K@976|Bacteroidetes,2FRUW@200643|Bacteroidia,22Y1X@171551|Porphyromonadaceae 976|Bacteroidetes Q Flavin containing amine oxidoreductase - - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 ko:K10027 ko00906,ko01100,ko01110,map00906,map01100,map01110 - R04787,R04798,R04800,R09691,R09692 RC01214,RC02088,RC02605 ko00000,ko00001,ko01000 - - - Amino_oxidase YYD2_k127_1015093_3 272630.MexAM1_META1p3220 1.923e-08 65.0 COG1562@1|root,COG1562@2|Bacteria,1MX4W@1224|Proteobacteria,2TTI0@28211|Alphaproteobacteria,1JRXD@119045|Methylobacteriaceae 28211|Alphaproteobacteria I PFAM Squalene phytoene synthase crtB GO:0003674,GO:0003824,GO:0004337,GO:0004659,GO:0006629,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016108,GO:0016109,GO:0016114,GO:0016116,GO:0016117,GO:0016740,GO:0016765,GO:0016767,GO:0042440,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046148,GO:0071704,GO:1901576 2.5.1.32,2.5.1.99 ko:K02291 ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110 M00097 R02065,R04218,R07270,R10177 RC00362,RC01101,RC02869 ko00000,ko00001,ko00002,ko01000,ko01006 - - - SQS_PSY YYD2_k127_1015093_1 240016.ABIZ01000001_gene1336 3.474e-51 194.0 COG0657@1|root,COG0657@2|Bacteria,46TVH@74201|Verrucomicrobia 74201|Verrucomicrobia I Carboxylesterase family - - - - - - - - - - - - Abhydrolase_3,EF-hand_5 YYD2_k127_1017701_3 926569.ANT_08300 7.155e-87 292.0 COG0377@1|root,COG0377@2|Bacteria,2G6GB@200795|Chloroflexi 200795|Chloroflexi C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoB1 - 1.6.5.3 ko:K00331 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q6 YYD2_k127_1017701_2 926569.ANT_09200 1.995e-158 516.0 COG0568@1|root,COG0568@2|Bacteria,2G5W3@200795|Chloroflexi 200795|Chloroflexi K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released rpoD - - ko:K03086 - - - - ko00000,ko03021 - - - Sigma70_r1_1,Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4 YYD2_k127_1017701_0 926569.ANT_08710 2.738e-203 650.0 COG0358@1|root,COG0358@2|Bacteria,2G65X@200795|Chloroflexi 200795|Chloroflexi L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication dnaG - - ko:K02316 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - DnaB_bind,Toprim_2,Toprim_4,Toprim_N,zf-CHC2 YYD2_k127_1017701_4 1122609.AUGT01000010_gene3668 2.81e-52 192.0 COG0847@1|root,COG0847@2|Bacteria,2GXVF@201174|Actinobacteria,4DVHN@85009|Propionibacteriales 201174|Actinobacteria L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease - - - - - - - - - - - - DUF5051,RNase_T YYD2_k127_1017701_1 63737.Npun_F4004 8.206e-159 513.0 2BZ5C@1|root,33RFU@2|Bacteria,1GNQZ@1117|Cyanobacteria,1HRUW@1161|Nostocales 1117|Cyanobacteria - - - - - - - - - - - - - - - YYD2_k127_102350_6 926569.ANT_00470 5.408e-69 239.0 COG0500@1|root,COG2226@2|Bacteria,2G780@200795|Chloroflexi 200795|Chloroflexi Q PFAM Methyltransferase type 11 - - - - - - - - - - - - Methyltransf_11 YYD2_k127_102350_10 28042.GU90_03125 4.813e-20 100.0 COG0725@1|root,COG0725@2|Bacteria,2GMPF@201174|Actinobacteria,4E350@85010|Pseudonocardiales 201174|Actinobacteria P Molybdenum ABC transporter, periplasmic molybdate-binding protein modA GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0008150,GO:0030288,GO:0030313,GO:0030973,GO:0031975,GO:0040007,GO:0042597,GO:0043167,GO:0043168,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0051704 - ko:K02020 ko02010,map02010 M00189 - - ko00000,ko00001,ko00002,ko02000 3.A.1.8 - - SBP_bac_11 YYD2_k127_102350_1 926569.ANT_02270 2.63e-211 674.0 COG0195@1|root,COG0195@2|Bacteria,2G5M5@200795|Chloroflexi 200795|Chloroflexi K Participates in both transcription termination and antitermination nusA - - ko:K02600 - - - - ko00000,ko03009,ko03021 - - - KH_5,NusA_N,S1 YYD2_k127_102350_8 926569.ANT_02260 5.035e-32 127.0 COG2740@1|root,COG2740@2|Bacteria,2G72H@200795|Chloroflexi 200795|Chloroflexi K Protein of unknown function (DUF448) - - - ko:K07742 - - - - ko00000 - - - DUF448 YYD2_k127_102350_0 926569.ANT_02250 1.238e-253 795.0 COG0532@1|root,COG0532@2|Bacteria,2G5UR@200795|Chloroflexi 200795|Chloroflexi J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex infB - - ko:K02519 - - - - ko00000,ko03012,ko03029 - - - GTP_EFTU,IF-2,IF2_N YYD2_k127_102350_7 926569.ANT_02240 3.425e-43 161.0 COG0858@1|root,COG0858@2|Bacteria,2G73E@200795|Chloroflexi 200795|Chloroflexi J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA rbfA - - ko:K02834 - - - - ko00000,ko03009 - - - RBFA YYD2_k127_102350_4 926569.ANT_02230 3.916e-88 301.0 COG0618@1|root,COG0618@2|Bacteria,2G6RF@200795|Chloroflexi 200795|Chloroflexi S PFAM phosphoesterase, RecJ domain protein - - 3.1.13.3,3.1.3.7 ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 - R00188,R00508 RC00078 ko00000,ko00001,ko01000,ko03400 - - - DHH,DHHA1 YYD2_k127_102350_2 926569.ANT_02220 1.569e-137 443.0 COG0130@1|root,COG0130@2|Bacteria,2G6F4@200795|Chloroflexi 200795|Chloroflexi J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs truB - 5.4.99.25 ko:K03177 - - - - ko00000,ko01000,ko03016 - - - TruB-C_2,TruB_C,TruB_C_2,TruB_N YYD2_k127_102350_5 926569.ANT_02900 6.68e-80 276.0 COG0196@1|root,COG0196@2|Bacteria,2G6JF@200795|Chloroflexi 200795|Chloroflexi H Belongs to the ribF family ribF - 2.7.1.26,2.7.7.2 ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R00161,R00549 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - FAD_syn,Flavokinase YYD2_k127_102350_3 926569.ANT_24710 2.363e-103 339.0 COG2041@1|root,COG2041@2|Bacteria,2G6ES@200795|Chloroflexi 200795|Chloroflexi S PFAM oxidoreductase, molybdopterin binding - - - - - - - - - - - - Oxidored_molyb YYD2_k127_102350_9 926569.ANT_25850 1.393e-23 103.0 COG0265@1|root,COG0265@2|Bacteria,2G6KG@200795|Chloroflexi 200795|Chloroflexi O PFAM peptidase S1 and S6, chymotrypsin Hap - - 3.4.21.107 ko:K04771 ko01503,ko02020,map01503,map02020 M00728 - - ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 - - - PDZ_2,Trypsin_2 YYD2_k127_1076455_7 926569.ANT_19490 2.524e-60 213.0 COG2332@1|root,COG2332@2|Bacteria,2G7CS@200795|Chloroflexi 200795|Chloroflexi O Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH - - - ko:K02197 - - - - ko00000 - - - CcmE YYD2_k127_1076455_0 635013.TherJR_2282 2.373e-158 522.0 COG1138@1|root,COG1138@2|Bacteria,1UH6S@1239|Firmicutes,24BV3@186801|Clostridia,26427@186807|Peptococcaceae 186801|Clostridia O PFAM Cytochrome C assembly protein - - - ko:K02198 - - - - ko00000,ko02000 9.B.14.1 - - CcmF_C,Cytochrom_C_asm YYD2_k127_1076455_8 926569.ANT_19460 1.015e-41 162.0 COG3088@1|root,COG3088@2|Bacteria,2G72W@200795|Chloroflexi 200795|Chloroflexi O subunit of a heme lyase ccmH - - ko:K02200 - - - - ko00000 - - - CcmH YYD2_k127_1076455_9 926550.CLDAP_40040 7.327e-38 149.0 COG0526@1|root,COG0526@2|Bacteria,2G737@200795|Chloroflexi 200795|Chloroflexi CO alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - ko:K02199 - - - - ko00000,ko03110 - - - AhpC-TSA,DnaJ YYD2_k127_1076455_11 926569.ANT_19430 5.303e-28 121.0 2DRD8@1|root,33BA3@2|Bacteria,2G7EV@200795|Chloroflexi 200795|Chloroflexi S zinc-ribbon domain - - - - - - - - - - - - zinc_ribbon_2 YYD2_k127_1076455_3 926569.ANT_19420 2.478e-89 317.0 COG2010@1|root,COG2010@2|Bacteria,2G741@200795|Chloroflexi 200795|Chloroflexi C Cytochrome c - - - - - - - - - - - - CarboxypepD_reg,Cytochrome_CBB3 YYD2_k127_1076455_2 926569.ANT_19410 1.462e-92 309.0 COG1131@1|root,COG1131@2|Bacteria,2G6IS@200795|Chloroflexi 200795|Chloroflexi V PFAM ABC transporter related ccmA - 3.6.3.41 ko:K02193 ko02010,map02010 M00259 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.107 - - ABC_tran YYD2_k127_1076455_4 926569.ANT_19400 6.865e-87 294.0 COG2386@1|root,COG2386@2|Bacteria,2G6TN@200795|Chloroflexi 200795|Chloroflexi O PFAM cytochrome c-type biogenesis protein CcmB ccmB - - ko:K02194 ko02010,map02010 M00259 - - ko00000,ko00001,ko00002,ko02000 3.A.1.107 - - CcmB YYD2_k127_1076455_5 926569.ANT_19390 7.612e-83 280.0 COG0755@1|root,COG0755@2|Bacteria,2G6SI@200795|Chloroflexi 200795|Chloroflexi O PFAM Cytochrome C assembly protein ccmC - - ko:K02195 ko02010,map02010 M00259 - - ko00000,ko00001,ko00002,ko02000 3.A.1.107 - - Cytochrom_C_asm YYD2_k127_1076455_6 331869.BAL199_16858 7.115e-61 214.0 COG3865@1|root,COG3865@2|Bacteria,1N7IY@1224|Proteobacteria,2U993@28211|Alphaproteobacteria 28211|Alphaproteobacteria S 3-demethylubiquinone-9 3-methyltransferase - - - - - - - - - - - - 3-dmu-9_3-mt YYD2_k127_1076455_12 1087448.Eab7_1160 4.855e-06 57.0 COG0202@1|root,COG0202@2|Bacteria,1VD02@1239|Firmicutes,4HKNS@91061|Bacilli 91061|Bacilli K COG0202 DNA-directed RNA polymerase, alpha subunit 40 kD subunit - - - - - - - - - - - - RNA_pol_A_CTD YYD2_k127_1076455_10 509635.N824_22450 3.215e-34 140.0 2DTJ6@1|root,33KM6@2|Bacteria,4P8V1@976|Bacteroidetes,1IZHY@117747|Sphingobacteriia 976|Bacteroidetes - - - - - - - - - - - - - - - YYD2_k127_1076455_13 479434.Sthe_3512 0.0007445 47.0 COG0346@1|root,COG0346@2|Bacteria,2GB9Q@200795|Chloroflexi,27YDI@189775|Thermomicrobia 189775|Thermomicrobia E lactoylglutathione lyase activity - - - - - - - - - - - - - YYD2_k127_1085527_3 215803.DB30_0760 2.571e-82 281.0 COG1834@1|root,COG1834@2|Bacteria,1MZ9U@1224|Proteobacteria,42PPN@68525|delta/epsilon subdivisions,2WK8S@28221|Deltaproteobacteria,2Z1ED@29|Myxococcales 28221|Deltaproteobacteria E Amidinotransferase - - 3.5.3.18 ko:K01482 - - - - ko00000,ko01000,ko04147 - - - Amidinotransf YYD2_k127_1085527_1 383372.Rcas_3156 1.375e-91 312.0 2DSCK@1|root,32USS@2|Bacteria,2GAKK@200795|Chloroflexi,376NF@32061|Chloroflexia 32061|Chloroflexia - - - - - - - - - - - - - - - YYD2_k127_1085527_2 926569.ANT_19370 3.864e-90 308.0 COG5653@1|root,COG5653@2|Bacteria,2G6Z0@200795|Chloroflexi 200795|Chloroflexi M Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_6 YYD2_k127_1085527_5 316274.Haur_4963 3.887e-28 118.0 COG0629@1|root,COG0629@2|Bacteria,2G6YE@200795|Chloroflexi,375QY@32061|Chloroflexia 32061|Chloroflexia L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism - - - ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 - - - ko00000,ko00001,ko03029,ko03032,ko03400 - - - SSB YYD2_k127_1085527_7 926550.CLDAP_34200 8.461e-13 70.0 2E5PY@1|root,330EK@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - YYD2_k127_1085527_0 1128421.JAGA01000002_gene351 1.979e-113 373.0 COG0414@1|root,COG0414@2|Bacteria,2NP0J@2323|unclassified Bacteria 2|Bacteria H Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate panC GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 ko:K01918 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 M00119 R02473 RC00096,RC00141 ko00000,ko00001,ko00002,ko01000 - - - Pantoate_ligase YYD2_k127_1085527_6 937777.Deipe_2178 2.701e-16 89.0 COG0265@1|root,COG0265@2|Bacteria 2|Bacteria O serine-type endopeptidase activity - - 3.4.21.107 ko:K04771,ko:K08372 ko01503,ko02020,map01503,map02020 M00728 - - ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 - - - PDZ_2,PG_binding_1,Trypsin_2 YYD2_k127_1100261_1 1150474.JQJI01000009_gene1291 1.671e-27 130.0 COG0737@1|root,COG0737@2|Bacteria 2|Bacteria F nucleotide catabolic process - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - - - - - - - - - - Cytochrome_C554 YYD2_k127_1100261_2 483219.LILAB_08670 2.147e-09 71.0 COG3509@1|root,COG3509@2|Bacteria 2|Bacteria Q xylan catabolic process - - 3.2.1.4 ko:K01179 ko00500,ko01100,map00500,map01100 - R06200,R11307,R11308 - ko00000,ko00001,ko01000 - GH5,GH9 - CBM9_1,CBM_4_9,CarboxypepD_reg,CelD_N,Esterase_phd,Glyco_hydro_9,OmpA,PD40,Peptidase_M14,RicinB_lectin_2 YYD2_k127_1100261_0 795666.MW7_1431 5.593e-52 185.0 COG4898@1|root,COG4898@2|Bacteria,1RHGW@1224|Proteobacteria,2W2HP@28216|Betaproteobacteria 28216|Betaproteobacteria S Uncharacterized protein conserved in bacteria (DUF2200) - - - - - - - - - - - - DUF2200 YYD2_k127_1142237_5 1124780.ANNU01000006_gene2890 2.43e-08 59.0 COG1345@1|root,COG1345@2|Bacteria 2|Bacteria N Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end - - - ko:K02396,ko:K02397 ko02040,map02040 - - - ko00000,ko00001,ko02035 - - - DUF1929,F5_F8_type_C,Flagellin_IN,Flagellin_N,Flg_bbr_C,LTD,Laminin_G_3,Peptidase_M6,TMP_2 YYD2_k127_1142237_4 1116375.VEJY3_21596 2.156e-21 102.0 COG4932@1|root,COG4932@2|Bacteria,1R944@1224|Proteobacteria,1S165@1236|Gammaproteobacteria,1Y09R@135623|Vibrionales 135623|Vibrionales M domain protein - - - - - - - - - - - - - YYD2_k127_1142237_1 926569.ANT_28300 2.375e-108 358.0 COG2199@1|root,COG3706@2|Bacteria,2G64S@200795|Chloroflexi 200795|Chloroflexi T PFAM GGDEF domain containing protein - - - - - - - - - - - - GGDEF,PAS_9 YYD2_k127_1142237_2 926569.ANT_13710 1.45e-104 345.0 COG0179@1|root,COG0179@2|Bacteria,2G6H8@200795|Chloroflexi 200795|Chloroflexi Q PFAM fumarylacetoacetate (FAA) hydrolase - - - - - - - - - - - - DUF2437,FAA_hydrolase YYD2_k127_1142237_3 1286631.X805_35580 5.533e-25 109.0 COG0724@1|root,COG0724@2|Bacteria,1N6VR@1224|Proteobacteria,2VRC4@28216|Betaproteobacteria,1KKP8@119065|unclassified Burkholderiales 28216|Betaproteobacteria S RNA-binding protein - - - - - - - - - - - - RRM_1 YYD2_k127_1142237_0 926569.ANT_14860 1.542e-151 483.0 COG1167@1|root,COG1167@2|Bacteria,2G61E@200795|Chloroflexi 200795|Chloroflexi EK PFAM Aminotransferase class I and II - - - ko:K05825 ko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210 - R01939 RC00006 ko00000,ko00001,ko01000 - - - Aminotran_1_2 YYD2_k127_1146641_1 926569.ANT_22610 4.18e-30 121.0 COG2348@1|root,COG2348@2|Bacteria,2G6KK@200795|Chloroflexi 200795|Chloroflexi V PFAM Methicillin resistance protein - - - - - - - - - - - - FemAB YYD2_k127_1146641_3 643648.Slip_2315 1.675e-05 50.0 COG2348@1|root,COG2348@2|Bacteria,1TRZU@1239|Firmicutes,24AU8@186801|Clostridia,42KEU@68298|Syntrophomonadaceae 186801|Clostridia V Acetyltransferase (GNAT) domain femX - 2.3.2.10,2.3.2.16 ko:K05363,ko:K11693 ko00550,ko01100,map00550,map01100 - R08776,R08779 RC00055,RC00096 ko00000,ko00001,ko01000,ko01011 - - - FemAB YYD2_k127_1146641_0 926569.ANT_22600 1.026e-115 379.0 COG2348@1|root,COG2348@2|Bacteria,2G6KK@200795|Chloroflexi 200795|Chloroflexi V PFAM Methicillin resistance protein - - - - - - - - - - - - FemAB YYD2_k127_1146641_2 768671.ThimaDRAFT_1775 4.526e-08 54.0 COG2515@1|root,COG2515@2|Bacteria,1MVYF@1224|Proteobacteria 1224|Proteobacteria E Catalyzes a cyclopropane ring-opening reaction, the irreversible conversion of 1-aminocyclopropane-1-carboxylate (ACC) to ammonia and alpha-ketobutyrate. Allows growth on ACC as a nitrogen source - - 4.4.1.15 ko:K05396 ko00270,map00270 - R01874 RC00382 ko00000,ko00001,ko01000 - - - PALP YYD2_k127_1149123_1 639282.DEFDS_0814 3.246e-74 253.0 COG0372@1|root,COG0372@2|Bacteria,2GEZB@200930|Deferribacteres 200930|Deferribacteres C Citrate synthase, C-terminal domain - - 2.3.3.1 ko:K01647 ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00740 R00351 RC00004,RC00067 br01601,ko00000,ko00001,ko00002,ko01000 - - - Citrate_synt YYD2_k127_1149123_0 1210884.HG799462_gene7988 5.977e-94 317.0 COG0500@1|root,COG0500@2|Bacteria,2IZ18@203682|Planctomycetes 203682|Planctomycetes Q Methyltransferase domain - - - - - - - - - - - - Methyltransf_11 YYD2_k127_1149123_2 1996.JOFO01000019_gene5292 8.543e-52 199.0 COG0477@1|root,COG2814@2|Bacteria,2GJU2@201174|Actinobacteria,4EFYJ@85012|Streptosporangiales 201174|Actinobacteria EGP Major Facilitator Superfamily - - - - - - - - - - - - MFS_1,Sugar_tr YYD2_k127_1151861_0 648757.Rvan_1664 1.504e-34 135.0 COG0596@1|root,COG0596@2|Bacteria,1RGAP@1224|Proteobacteria,2UCT5@28211|Alphaproteobacteria 28211|Alphaproteobacteria S alpha/beta hydrolase fold - - - - - - - - - - - - Abhydrolase_1 YYD2_k127_1218723_1 2325.TKV_c16340 2.347e-129 422.0 COG0057@1|root,COG0057@2|Bacteria,1TNYU@1239|Firmicutes,247IZ@186801|Clostridia,42F8D@68295|Thermoanaerobacterales 186801|Clostridia C TIGRFAM Glyceraldehyde-3-phosphate dehydrogenase, type I gap GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01061 RC00149 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 - - - Gp_dh_C,Gp_dh_N YYD2_k127_1218723_0 926569.ANT_13240 1.619e-156 507.0 COG0126@1|root,COG0126@2|Bacteria,2G5UE@200795|Chloroflexi 200795|Chloroflexi F Belongs to the phosphoglycerate kinase family pgk - 2.7.2.3 ko:K00927 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01512 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000,ko04147 - - - PGK YYD2_k127_1218723_2 326427.Cagg_3772 2.399e-67 246.0 COG0457@1|root,COG0515@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,2G7ZS@200795|Chloroflexi,3757W@32061|Chloroflexia 32061|Chloroflexia KLT Serine threonine protein kinase - - 2.7.11.1 ko:K08884,ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase,TPR_11,TPR_16,TPR_2,TPR_6,TPR_8 YYD2_k127_1238731_0 1192034.CAP_3742 3.188e-223 699.0 COG0538@1|root,COG0538@2|Bacteria,1MW3J@1224|Proteobacteria,42M56@68525|delta/epsilon subdivisions,2WJ8W@28221|Deltaproteobacteria,2YYDJ@29|Myxococcales 28221|Deltaproteobacteria C Isocitrate/isopropylmalate dehydrogenase icd - 1.1.1.42 ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 M00009,M00010,M00173,M00740 R00267,R00268,R01899 RC00001,RC00084,RC00114,RC00626,RC02801 br01601,ko00000,ko00001,ko00002,ko01000 - - - Iso_dh YYD2_k127_1238731_1 7213.XP_004529736.1 6.233e-129 422.0 COG0458@1|root,KOG0370@2759|Eukaryota,38CAC@33154|Opisthokonta,3B9FF@33208|Metazoa,3CS9A@33213|Bilateria,41U31@6656|Arthropoda,3SJKC@50557|Insecta,44ZM5@7147|Diptera 33208|Metazoa F metal ion binding. It is involved in the biological process described with 'de novo' pyrimidine nucleobase biosynthetic process CAD GO:0000050,GO:0000052,GO:0000166,GO:0001882,GO:0001884,GO:0002119,GO:0002134,GO:0002164,GO:0003674,GO:0003824,GO:0004070,GO:0004087,GO:0004088,GO:0004151,GO:0004672,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006082,GO:0006139,GO:0006206,GO:0006207,GO:0006213,GO:0006220,GO:0006221,GO:0006228,GO:0006464,GO:0006468,GO:0006520,GO:0006525,GO:0006526,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009791,GO:0009887,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0016053,GO:0016301,GO:0016310,GO:0016363,GO:0016597,GO:0016740,GO:0016741,GO:0016743,GO:0016772,GO:0016773,GO:0016787,GO:0016810,GO:0016812,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0017144,GO:0018107,GO:0018130,GO:0018193,GO:0018210,GO:0019103,GO:0019240,GO:0019438,GO:0019538,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0019899,GO:0022612,GO:0030424,GO:0030554,GO:0031406,GO:0031667,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032549,GO:0032551,GO:0032553,GO:0032555,GO:0032557,GO:0032559,GO:0032868,GO:0032991,GO:0033267,GO:0034399,GO:0034404,GO:0034641,GO:0034654,GO:0035295,GO:0035639,GO:0036094,GO:0036211,GO:0036477,GO:0042221,GO:0042455,GO:0042594,GO:0042802,GO:0042995,GO:0043005,GO:0043025,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043195,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043434,GO:0043436,GO:0043603,GO:0043604,GO:0043679,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045202,GO:0046051,GO:0046112,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046394,GO:0046483,GO:0046777,GO:0046872,GO:0046914,GO:0048513,GO:0048565,GO:0048731,GO:0048732,GO:0048856,GO:0050896,GO:0055086,GO:0055123,GO:0060465,GO:0070013,GO:0070335,GO:0070406,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:0097458,GO:0098793,GO:0120025,GO:0120038,GO:0140096,GO:0150034,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901652,GO:1901657,GO:1901659,GO:1901698,GO:1901700,GO:1905905 2.1.3.2,3.5.2.3,6.3.5.5 ko:K11540 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R01397,R01993,R10948,R10949 RC00002,RC00010,RC00043,RC00064,RC00632,RC02750,RC02798,RC02850,RC03314 ko00000,ko00001,ko00002,ko01000,ko01002 - - - Amidohydro_1,CPSase_L_D2,CPSase_L_D3,CPSase_sm_chain,GATase,MGS,OTCace,OTCace_N YYD2_k127_1250495_5 926569.ANT_23160 6.706e-46 168.0 COG0419@1|root,COG0419@2|Bacteria,2G682@200795|Chloroflexi 200795|Chloroflexi L PFAM SMC domain protein sbcC - - ko:K03546 - - - - ko00000,ko03400 - - - AAA_23,Rad50_zn_hook,SbcCD_C YYD2_k127_1250495_3 485913.Krac_2500 2.55e-83 291.0 COG1215@1|root,COG1215@2|Bacteria,2G6RJ@200795|Chloroflexi 200795|Chloroflexi M PFAM Glycosyl transferase family 2 - - - ko:K14597 ko00906,map00906 - R07544,R07546 RC00262 ko00000,ko00001 - - - Glycos_transf_2 YYD2_k127_1250495_6 926569.ANT_29050 4.783e-43 162.0 COG3005@1|root,COG3005@2|Bacteria,2G748@200795|Chloroflexi 200795|Chloroflexi C NapC/NirT cytochrome c family, N-terminal region nrfH - - ko:K15876 ko00910,ko01120,map00910,map01120 M00530 R05712 RC00176 ko00000,ko00001,ko00002 - - - Cytochrom_NNT YYD2_k127_1250495_0 926569.ANT_29060 1.076e-172 552.0 COG3303@1|root,COG3303@2|Bacteria,2G5UX@200795|Chloroflexi 200795|Chloroflexi C Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process nrfA - 1.7.2.2 ko:K03385 ko00910,ko01120,ko05132,map00910,map01120,map05132 M00530 R05712 RC00176 ko00000,ko00001,ko00002,ko01000 - - - Cytochrom_C552 YYD2_k127_1250495_9 373994.Riv7116_6247 2.874e-17 87.0 2E3GU@1|root,32YFI@2|Bacteria,1G9HI@1117|Cyanobacteria,1HP28@1161|Nostocales 1117|Cyanobacteria - - - - - - - - - - - - - - - YYD2_k127_1250495_7 671143.DAMO_1690 1.067e-38 153.0 COG0664@1|root,COG0664@2|Bacteria,2NPVK@2323|unclassified Bacteria 2|Bacteria K Transcriptional regulator, Crp Fnr family - - - ko:K10914,ko:K21563 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 - - - ko00000,ko00001,ko03000 - - - HTH_Crp_2,cNMP_binding YYD2_k127_1250495_4 926569.ANT_01450 1.342e-69 239.0 COG2236@1|root,COG2236@2|Bacteria,2G6Y5@200795|Chloroflexi 200795|Chloroflexi F Phosphoribosyl transferase domain - - - ko:K07101 - - - - ko00000 - - - Pribosyltran YYD2_k127_1250495_8 304371.MCP_2443 4.147e-18 95.0 arCOG08211@1|root,arCOG08211@2157|Archaea 2157|Archaea - - - - - - - - - - - - - - - YYD2_k127_1250495_2 479434.Sthe_2389 4.093e-90 301.0 COG4122@1|root,COG4122@2|Bacteria,2G990@200795|Chloroflexi,27ZCN@189775|Thermomicrobia 189775|Thermomicrobia S O-methyltransferase - - - - - - - - - - - - Methyltransf_24 YYD2_k127_1250495_1 926569.ANT_28860 3.053e-117 384.0 COG1198@1|root,COG1198@2|Bacteria,2G60J@200795|Chloroflexi 200795|Chloroflexi L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA priA - - ko:K04066 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C,ResIII YYD2_k127_1268018_0 867845.KI911784_gene1213 3.73e-261 816.0 COG0529@1|root,COG2046@1|root,COG0529@2|Bacteria,COG2046@2|Bacteria,2G7JD@200795|Chloroflexi,376A2@32061|Chloroflexia 32061|Chloroflexia H Catalyzes the synthesis of activated sulfate cysC - 2.7.7.4 ko:K00958 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 M00176,M00596 R00529,R04929 RC02809,RC02889 ko00000,ko00001,ko00002,ko01000 - - - APS_kinase,ATP-sulfurylase,PUA_2 YYD2_k127_1268018_1 926569.ANT_06420 2.847e-37 145.0 COG0673@1|root,COG0673@2|Bacteria 2|Bacteria S inositol 2-dehydrogenase activity ptmF - 2.7.7.82 ko:K18431 ko00520,map00520 - R10182 RC00152 ko00000,ko00001,ko01000 - - - GFO_IDH_MocA,GFO_IDH_MocA_C YYD2_k127_1307854_0 926550.CLDAP_06970 7.226e-158 503.0 COG0589@1|root,COG1215@1|root,COG0589@2|Bacteria,COG1215@2|Bacteria 2|Bacteria M transferase activity, transferring glycosyl groups gpgS - 2.4.1.266,2.4.1.268 ko:K09118,ko:K13693,ko:K21349 - - - - ko00000,ko01000,ko01003 - GT81 - Glycos_transf_2,Usp YYD2_k127_1307854_1 1121403.AUCV01000065_gene4170 1.783e-88 317.0 COG0025@1|root,COG0025@2|Bacteria,1MW5T@1224|Proteobacteria,42M9Y@68525|delta/epsilon subdivisions,2X5IZ@28221|Deltaproteobacteria,2MPF3@213118|Desulfobacterales 28221|Deltaproteobacteria P Sodium/hydrogen exchanger family - - - ko:K03316 - - - - ko00000 2.A.36 - - Na_H_Exchanger YYD2_k127_1307854_2 926569.ANT_04420 2.574e-24 119.0 COG3870@1|root,COG3870@2|Bacteria 2|Bacteria S Cyclic-di-AMP receptor - - - - - - - - - - - - CdAMP_rec YYD2_k127_1307854_3 1232430.CAVG010000015_gene100 9.192e-09 57.0 COG3870@1|root,COG3870@2|Bacteria,1V6NI@1239|Firmicutes,4HIHA@91061|Bacilli,4GZ45@90964|Staphylococcaceae 91061|Bacilli S Cyclic-di-AMP receptor yaaQ - - - - - - - - - - - CdAMP_rec YYD2_k127_1331036_1 926569.ANT_20910 3.225e-95 319.0 COG0324@1|root,COG0324@2|Bacteria,2G5S7@200795|Chloroflexi 200795|Chloroflexi J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) miaA GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 - R01122 RC02820 ko00000,ko00001,ko01000,ko01006,ko03016 - - - IPPT YYD2_k127_1331036_0 671143.DAMO_2604 6.517e-175 566.0 COG0318@1|root,COG0318@2|Bacteria,2NPH9@2323|unclassified Bacteria 2|Bacteria IQ COGs COG0318 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II - - 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding,AMP-binding_C YYD2_k127_1331036_2 926569.ANT_20890 2.814e-55 196.0 COG0465@1|root,COG0465@2|Bacteria,2G5J3@200795|Chloroflexi 200795|Chloroflexi O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins ftsH - - ko:K03798 - M00742 - - ko00000,ko00002,ko01000,ko01002,ko03110 - - - AAA,FtsH_ext,Peptidase_M41 YYD2_k127_1345066_0 1128421.JAGA01000003_gene2953 0.0 1018.0 COG0366@1|root,COG0366@2|Bacteria,2NQQN@2323|unclassified Bacteria 2|Bacteria G Alpha amylase, catalytic domain - - - - - - - - - - - - Alpha-amylase YYD2_k127_1375327_3 926569.ANT_17610 3.746e-44 164.0 COG1611@1|root,COG1611@2|Bacteria,2G6P1@200795|Chloroflexi 200795|Chloroflexi S Belongs to the LOG family - - 3.2.2.10 ko:K06966 ko00230,ko00240,map00230,map00240 - R00182,R00510 RC00063,RC00318 ko00000,ko00001,ko01000 - - - Lysine_decarbox YYD2_k127_1375327_0 926569.ANT_14570 1.051e-290 915.0 COG1111@1|root,COG1205@1|root,COG1403@1|root,COG1111@2|Bacteria,COG1205@2|Bacteria,COG1403@2|Bacteria,2G605@200795|Chloroflexi 200795|Chloroflexi L DEAD DEAH box helicase domain protein - - - ko:K06877 - - - - ko00000 - - - DEAD,DUF1998,HNH,Helicase_C YYD2_k127_1375327_1 926569.ANT_12930 7.393e-77 269.0 COG0392@1|root,COG0392@2|Bacteria 2|Bacteria M lysyltransferase activity mprF - - ko:K07027 - - - - ko00000,ko02000 4.D.2 - - LPG_synthase_TM YYD2_k127_1375327_2 479434.Sthe_1388 9.652e-60 214.0 COG2738@1|root,COG2738@2|Bacteria,2G6KQ@200795|Chloroflexi,27YW2@189775|Thermomicrobia 189775|Thermomicrobia S Putative neutral zinc metallopeptidase - - - ko:K06973 - - - - ko00000 - - - Zn_peptidase_2 YYD2_k127_1375327_4 926569.ANT_12940 3.233e-11 65.0 COG0793@1|root,COG0793@2|Bacteria,2G6HR@200795|Chloroflexi 200795|Chloroflexi M Belongs to the peptidase S41A family - - 3.4.21.102 ko:K03797 - - - - ko00000,ko01000,ko01002 - - - PDZ_2,Peptidase_S41 YYD2_k127_1417727_2 926569.ANT_26670 6.057e-39 147.0 COG0459@1|root,COG0459@2|Bacteria,2G65N@200795|Chloroflexi 200795|Chloroflexi O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions groL GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 - - - ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 - - - Cpn60_TCP1 YYD2_k127_1417727_1 926569.ANT_26490 2.353e-63 229.0 COG0760@1|root,COG0760@2|Bacteria,2G9A4@200795|Chloroflexi 200795|Chloroflexi M PFAM PpiC-type peptidyl-prolyl cis-trans isomerase - - 5.2.1.8 ko:K03769 - - - - ko00000,ko01000,ko03110 - - - Rotamase_3,SurA_N_3 YYD2_k127_1417727_0 324602.Caur_1435 1.124e-95 323.0 COG0115@1|root,COG0115@2|Bacteria,2G6AX@200795|Chloroflexi,37550@32061|Chloroflexia 32061|Chloroflexia E Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family - - 2.6.1.42 ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00036,M00119,M00570 R01090,R01214,R02199,R10991 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_4 YYD2_k127_1470769_5 926569.ANT_00360 5.261e-06 53.0 2EA58@1|root,334A5@2|Bacteria,2G7FD@200795|Chloroflexi 200795|Chloroflexi - - - - - - - - - - - - - - - YYD2_k127_1470769_2 926569.ANT_00350 2.099e-58 211.0 28MEN@1|root,2ZASA@2|Bacteria,2G97S@200795|Chloroflexi 200795|Chloroflexi - - - - - - - - - - - - - - - YYD2_k127_1470769_1 926569.ANT_12670 2.083e-62 216.0 COG2185@1|root,COG2185@2|Bacteria,2G6S9@200795|Chloroflexi 200795|Chloroflexi I PFAM cobalamin B12-binding domain protein - - 5.4.99.2 ko:K01849 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00375,M00376,M00741 R00833 RC00395 ko00000,ko00001,ko00002,ko01000 - - - B12-binding YYD2_k127_1470769_0 926569.ANT_12660 1.262e-97 329.0 COG1703@1|root,COG1703@2|Bacteria,2G670@200795|Chloroflexi 200795|Chloroflexi E TIGRFAM LAO AO transport system ATPase - - - ko:K07588 - - - - ko00000,ko01000 - - - ArgK YYD2_k127_1470769_3 926569.ANT_12640 2.53e-55 207.0 COG1670@1|root,COG1670@2|Bacteria,2G73Y@200795|Chloroflexi 200795|Chloroflexi J PFAM GCN5-related N-acetyltransferase - - - - - - - - - - - - Acetyltransf_3 YYD2_k127_1505551_3 926569.ANT_06490 8.627e-87 291.0 COG1083@1|root,COG1083@2|Bacteria 2|Bacteria M cytidylyl-transferase - - 2.7.7.43 ko:K00983 ko00520,ko01100,map00520,map01100 - R01117,R04215 RC00152 ko00000,ko00001,ko01000 - - - CTP_transf_3,RraA-like YYD2_k127_1505551_0 631362.Thi970DRAFT_02821 2.382e-184 589.0 COG0500@1|root,COG1215@1|root,COG1215@2|Bacteria,COG2226@2|Bacteria,1QR54@1224|Proteobacteria,1SMRM@1236|Gammaproteobacteria 1236|Gammaproteobacteria MQ Glycosyltransferase like family 2 - - - - - - - - - - - - Glycos_transf_2 YYD2_k127_1505551_5 926569.ANT_06280 1.29e-52 190.0 COG1846@1|root,COG1846@2|Bacteria 2|Bacteria K DNA-binding transcription factor activity - - 1.9.3.1 ko:K02274 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.2,3.D.4.3,3.D.4.4,3.D.4.6 - - DUF4388,HTH_24,MarR_2 YYD2_k127_1505551_2 324602.Caur_2120 3.908e-131 426.0 COG0451@1|root,COG0451@2|Bacteria,2GBWQ@200795|Chloroflexi,3774S@32061|Chloroflexia 32061|Chloroflexia M PFAM NAD-dependent epimerase dehydratase - - - - - - - - - - - - Epimerase YYD2_k127_1505551_1 926569.ANT_06290 2.921e-152 486.0 COG0451@1|root,COG0451@2|Bacteria,2G7M6@200795|Chloroflexi 200795|Chloroflexi GM Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction fcl - 1.1.1.271 ko:K02377 ko00051,ko00520,ko01100,map00051,map00520,map01100 - R05692 RC01014 ko00000,ko00001,ko01000 - - - Epimerase YYD2_k127_1505551_4 316274.Haur_1034 2.148e-53 192.0 COG1682@1|root,COG1682@2|Bacteria,2G7UW@200795|Chloroflexi,376TT@32061|Chloroflexia 32061|Chloroflexia GM PFAM ABC-2 type transporter - - - ko:K09690 ko02010,map02010 M00250 - - ko00000,ko00001,ko00002,ko02000 3.A.1.103 - - ABC2_membrane YYD2_k127_152489_0 1415754.JQMK01000005_gene1585 2.529e-06 59.0 COG4254@1|root,COG4254@2|Bacteria,1NKA2@1224|Proteobacteria,1S1E7@1236|Gammaproteobacteria,46B8N@72275|Alteromonadaceae 1236|Gammaproteobacteria S protein conserved in bacteria - - - - - - - - - - - - FecR,LysM YYD2_k127_1534163_2 926550.CLDAP_05530 1.129e-18 96.0 COG1737@1|root,COG1737@2|Bacteria 2|Bacteria K DNA-binding transcription factor activity - - - - - - - - - - - - HTH_6,SIS YYD2_k127_1534163_0 926569.ANT_13710 1.598e-110 362.0 COG0179@1|root,COG0179@2|Bacteria,2G6H8@200795|Chloroflexi 200795|Chloroflexi Q PFAM fumarylacetoacetate (FAA) hydrolase - - - - - - - - - - - - DUF2437,FAA_hydrolase YYD2_k127_1537604_0 671143.DAMO_0407 6.974e-201 635.0 COG0531@1|root,COG0531@2|Bacteria,2NNZQ@2323|unclassified Bacteria 2|Bacteria E Amino acid permease ydaO GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - - - - - - - - - - AA_permease_2 YYD2_k127_1546583_1 926569.ANT_07650 2.123e-164 533.0 COG0577@1|root,COG0577@2|Bacteria,2G65B@200795|Chloroflexi 200795|Chloroflexi V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD YYD2_k127_1546583_5 926569.ANT_07660 2.429e-101 336.0 COG1136@1|root,COG1136@2|Bacteria,2G69N@200795|Chloroflexi 200795|Chloroflexi P Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran YYD2_k127_1546583_7 926569.ANT_07670 1.134e-96 332.0 COG0845@1|root,COG0845@2|Bacteria,2G6RK@200795|Chloroflexi 200795|Chloroflexi M PFAM secretion protein HlyD family protein - - - ko:K02005 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 YYD2_k127_1546583_2 697281.Mahau_2246 1.069e-121 407.0 COG0493@1|root,COG0493@2|Bacteria,1TQ1A@1239|Firmicutes,248EK@186801|Clostridia,42EUY@68295|Thermoanaerobacterales 186801|Clostridia C PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase gltA - 1.4.1.13,1.4.1.14 ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 - R00093,R00114,R00248 RC00006,RC00010,RC02799 ko00000,ko00001,ko01000 - - - DHODB_Fe-S_bind,Fer4_20,Pyr_redox_2 YYD2_k127_1546583_0 351160.RCIX2731 2.598e-197 626.0 COG0557@1|root,arCOG04686@2157|Archaea,2XT2E@28890|Euryarchaeota,2NA9N@224756|Methanomicrobia 224756|Methanomicrobia K PFAM ribonuclease II - - 3.1.13.1 ko:K01147 - - - - ko00000,ko01000,ko03016 - - - RNB YYD2_k127_1546583_3 926569.ANT_30540 3.801e-118 398.0 2EZVX@1|root,33T0B@2|Bacteria,2G87X@200795|Chloroflexi 200795|Chloroflexi - - - - - - - - - - - - - - - YYD2_k127_1546583_4 926569.ANT_01590 1.029e-110 371.0 COG0652@1|root,COG1651@1|root,COG0652@2|Bacteria,COG1651@2|Bacteria,2G8IA@200795|Chloroflexi 200795|Chloroflexi M PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides - - 5.2.1.8 ko:K01802 - - - - ko00000,ko01000 - - - Pro_isomerase,Thioredoxin_4 YYD2_k127_1546583_6 926569.ANT_14770 7.619e-100 333.0 COG2519@1|root,COG2519@2|Bacteria,2G8GD@200795|Chloroflexi 200795|Chloroflexi J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA - - 2.1.1.219,2.1.1.220 ko:K07442 - - - - ko00000,ko01000,ko03016 - - - GCD14 YYD2_k127_1596882_7 797299.HALLA_03760 5.086e-33 131.0 COG0697@1|root,arCOG00271@2157|Archaea,2XY2J@28890|Euryarchaeota,23Z1Z@183963|Halobacteria 183963|Halobacteria G EamA-like transporter family - - - - - - - - - - - - EamA YYD2_k127_1596882_5 926569.ANT_19780 3.255e-58 213.0 COG2887@1|root,COG2887@2|Bacteria,2G8SQ@200795|Chloroflexi 200795|Chloroflexi L PD-(D/E)XK nuclease superfamily - - - - - - - - - - - - PDDEXK_1 YYD2_k127_1596882_4 1192034.CAP_8495 2.791e-64 230.0 COG4632@1|root,COG4632@2|Bacteria,1PIAX@1224|Proteobacteria,43DRZ@68525|delta/epsilon subdivisions,2WYR4@28221|Deltaproteobacteria,2Z0EH@29|Myxococcales 28221|Deltaproteobacteria G Phosphodiester glycosidase - - - - - - - - - - - - NAGPA YYD2_k127_1596882_3 926569.ANT_14370 4.272e-98 329.0 COG3872@1|root,COG3872@2|Bacteria,2G5XQ@200795|Chloroflexi 200795|Chloroflexi S Protein of unknown function (DUF1385) - - - ko:K09153 - - - - ko00000 - - - DUF1385 YYD2_k127_1596882_1 926569.ANT_14380 9.753e-158 511.0 COG0624@1|root,COG0624@2|Bacteria,2G5KY@200795|Chloroflexi 200795|Chloroflexi E peptidase dimerisation domain protein - - - - - - - - - - - - M20_dimer,Peptidase_M20 YYD2_k127_1596882_0 926569.ANT_11300 5.937e-198 633.0 COG0747@1|root,COG0747@2|Bacteria,2G5NC@200795|Chloroflexi 200795|Chloroflexi E PFAM extracellular solute-binding protein, family 5 - - - ko:K02035 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - SBP_bac_5 YYD2_k127_1596882_9 926569.ANT_11310 4.505e-20 91.0 COG1314@1|root,COG1314@2|Bacteria 2|Bacteria U P-P-bond-hydrolysis-driven protein transmembrane transporter activity secG GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 - - SecG YYD2_k127_1596882_2 926569.ANT_11320 3.246e-110 366.0 COG0613@1|root,COG0613@2|Bacteria,2G9BU@200795|Chloroflexi 200795|Chloroflexi S SMART phosphoesterase PHP domain protein - - - - - - - - - - - - - YYD2_k127_1596882_8 926569.ANT_22410 3.498e-24 106.0 COG0360@1|root,COG0360@2|Bacteria,2G7DG@200795|Chloroflexi 200795|Chloroflexi J Binds together with S18 to 16S ribosomal RNA rpsF - - ko:K02990 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011,ko03029 - - - Ribosomal_S6 YYD2_k127_1596882_6 926569.ANT_22420 1.328e-47 173.0 COG0629@1|root,COG0629@2|Bacteria,2G6YE@200795|Chloroflexi 200795|Chloroflexi L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism ssb - - ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 - - - ko00000,ko00001,ko03029,ko03032,ko03400 - - - SSB YYD2_k127_1620892_0 871968.DESME_07925 6.15e-63 226.0 COG0697@1|root,COG0697@2|Bacteria,1V1H0@1239|Firmicutes,24BBW@186801|Clostridia 186801|Clostridia EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - - - - - - - - - - EamA YYD2_k127_1620892_1 118166.JH976537_gene4051 4.841e-57 205.0 COG4894@1|root,COG4894@2|Bacteria,1GEPD@1117|Cyanobacteria 1117|Cyanobacteria S LURP-one-related - - - - - - - - - - - - LOR YYD2_k127_1620892_2 1476583.DEIPH_ctg050orf0040 1.259e-46 173.0 COG1765@1|root,COG1765@2|Bacteria 2|Bacteria O OsmC-like protein - - - - - - - - - - - - OsmC,TusA YYD2_k127_1620892_4 56110.Oscil6304_4853 3.911e-10 72.0 COG2319@1|root,COG2319@2|Bacteria,1FZVW@1117|Cyanobacteria 1117|Cyanobacteria A WD domain, G-beta repeat - - - - - - - - - - - - WD40 YYD2_k127_1620892_3 96561.Dole_1695 5.173e-42 164.0 COG1145@1|root,COG1145@2|Bacteria,1MW11@1224|Proteobacteria,42NUY@68525|delta/epsilon subdivisions,2WK01@28221|Deltaproteobacteria,2MMY1@213118|Desulfobacterales 28221|Deltaproteobacteria C PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - - - - - - - - - - Fer4 YYD2_k127_1620892_5 278963.ATWD01000002_gene256 6.914e-07 60.0 COG0823@1|root,COG3710@1|root,COG0823@2|Bacteria,COG3710@2|Bacteria,3Y3FE@57723|Acidobacteria,2JIZ4@204432|Acidobacteriia 204432|Acidobacteriia KU Transcriptional regulatory protein, C terminal - - - - - - - - - - - - PD40,Trans_reg_C YYD2_k127_1622310_2 693661.Arcve_1567 7.537e-197 626.0 COG1148@1|root,arCOG02235@2157|Archaea,2XT3X@28890|Euryarchaeota,245U1@183980|Archaeoglobi 183980|Archaeoglobi C Heterodisulfide reductase subunit A and related polyferredoxins - - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 ko:K03388 ko00680,ko01100,ko01120,ko01200,map00680,map01100,map01120,map01200 M00356,M00357,M00563,M00567 R04540,R11928,R11931,R11943,R11944 RC00011 ko00000,ko00001,ko00002,ko01000 - - - Pyr_redox_2 YYD2_k127_1622310_7 429009.Adeg_2015 4.437e-54 194.0 COG1908@1|root,COG1908@2|Bacteria,1V7I6@1239|Firmicutes,24JV2@186801|Clostridia,42GG4@68295|Thermoanaerobacterales 186801|Clostridia C PFAM methyl-viologen-reducing hydrogenase delta subunit - - 1.8.98.5,1.8.98.6 ko:K14127 ko00680,map00680 - R00019,R11943,R11944 RC00011 ko00000,ko00001,ko01000 - - - FlpD,NADH_4Fe-4S YYD2_k127_1622310_3 1379698.RBG1_1C00001G0048 2.941e-118 389.0 COG1941@1|root,COG1941@2|Bacteria,2NQP6@2323|unclassified Bacteria 2|Bacteria C NADH ubiquinone oxidoreductase, 20 Kd subunit - - 1.8.98.5 ko:K14128 ko00680,map00680 - R00019,R11943 RC00011 ko00000,ko00001,ko01000 - - - Fe_hyd_lg_C,Fer4,FlpD,Oxidored_q6 YYD2_k127_1622310_1 1379698.RBG1_1C00001G0047 2.105e-228 716.0 COG3259@1|root,COG3259@2|Bacteria,2NQGS@2323|unclassified Bacteria 2|Bacteria C Nickel-dependent hydrogenase - - 1.8.98.5 ko:K14126 ko00680,map00680 - R00019,R11943 RC00011 ko00000,ko00001,ko01000 - - - NiFeSe_Hases YYD2_k127_1622310_11 1449126.JQKL01000002_gene1553 1.619e-22 104.0 COG0680@1|root,COG0680@2|Bacteria 2|Bacteria C spore germination hybD - - ko:K03605 - - - - ko00000,ko01000,ko01002 - - - HycI YYD2_k127_1622310_14 269799.Gmet_1532 1.316e-16 87.0 COG0664@1|root,COG0664@2|Bacteria,1PSVY@1224|Proteobacteria,42XY7@68525|delta/epsilon subdivisions,2WTBB@28221|Deltaproteobacteria 28221|Deltaproteobacteria T Cyclic nucleotide-monophosphate binding domain - - - - - - - - - - - - cNMP_binding YYD2_k127_1622310_5 525897.Dbac_0080 6.705e-101 336.0 COG2962@1|root,COG2962@2|Bacteria,1MX5G@1224|Proteobacteria,42QPT@68525|delta/epsilon subdivisions,2WN1M@28221|Deltaproteobacteria,2M987@213115|Desulfovibrionales 28221|Deltaproteobacteria S TIGRFAM RarD protein, DMT superfamily transporter rarD - - ko:K05786 - - - - ko00000,ko02000 2.A.7.7 - - EamA YYD2_k127_1622310_0 926569.ANT_12590 0.0 1080.0 COG2217@1|root,COG2217@2|Bacteria,2G5J7@200795|Chloroflexi 200795|Chloroflexi P ATPase, P-type (transporting), HAD superfamily, subfamily IC - - 3.6.3.54 ko:K17686 ko01524,ko04016,map01524,map04016 - R00086 RC00002 ko00000,ko00001,ko01000 3.A.3.5 - - E1-E2_ATPase,HMA,Hydrolase YYD2_k127_1622310_13 926569.ANT_12600 2.332e-18 87.0 COG2608@1|root,COG2608@2|Bacteria 2|Bacteria P mercury ion transmembrane transporter activity copZ - - ko:K07213 ko04978,map04978 - - - ko00000,ko00001 - - - HMA YYD2_k127_1622310_10 926569.ANT_12610 1.49e-30 123.0 COG1937@1|root,COG1937@2|Bacteria,2G7H9@200795|Chloroflexi 200795|Chloroflexi S Metal-sensitive transcriptional repressor - - - ko:K21600 - - - - ko00000,ko03000 - - - Trns_repr_metal YYD2_k127_1622310_12 706191.PANA_3252 9.591e-20 96.0 COG0454@1|root,COG0456@2|Bacteria,1QU9D@1224|Proteobacteria,1SE3Q@1236|Gammaproteobacteria,3W190@53335|Pantoea 1236|Gammaproteobacteria K to Labrenzia alexandrii DFL-11, acetyltransferase, GNAT family (NCBI ZP_05113985.1) - - - - - - - - - - - - Acetyltransf_1,Acetyltransf_10 YYD2_k127_1622310_4 926569.ANT_10380 4.232e-105 352.0 COG1694@1|root,COG3956@2|Bacteria,2G5WH@200795|Chloroflexi 200795|Chloroflexi S TIGRFAM MazG family protein - - - ko:K02499 - - - - ko00000,ko03036 - - - MazG,TP_methylase YYD2_k127_1622310_6 926569.ANT_10350 4.997e-56 198.0 COG0103@1|root,COG0103@2|Bacteria,2G6UZ@200795|Chloroflexi 200795|Chloroflexi J Belongs to the universal ribosomal protein uS9 family rpsI - - ko:K02996 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S9 YYD2_k127_1622310_8 926569.ANT_10340 9.515e-53 189.0 COG0102@1|root,COG0102@2|Bacteria,2G6M4@200795|Chloroflexi 200795|Chloroflexi J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly rplM GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02871 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L13 YYD2_k127_1622310_9 926569.ANT_10330 5.256e-35 138.0 COG0101@1|root,COG0101@2|Bacteria,2G6PE@200795|Chloroflexi 200795|Chloroflexi J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs truA GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 ko:K06173 - - - - ko00000,ko01000,ko03016 - - - PseudoU_synth_1 YYD2_k127_1623829_1 926569.ANT_22560 1.176e-91 310.0 COG0524@1|root,COG0524@2|Bacteria,2G8C3@200795|Chloroflexi 200795|Chloroflexi H PFAM PfkB domain protein - - 2.7.1.83 ko:K16328 ko00240,map00240 - R03315 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PfkB YYD2_k127_1623829_2 234267.Acid_6660 8.783e-90 306.0 COG2313@1|root,COG2313@2|Bacteria 2|Bacteria Q pseudouridylate synthase activity psuG GO:0001522,GO:0003674,GO:0003824,GO:0004730,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006139,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0016043,GO:0016070,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016787,GO:0016798,GO:0016829,GO:0016835,GO:0016836,GO:0019200,GO:0022607,GO:0030145,GO:0034641,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046835,GO:0046872,GO:0046914,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0090304,GO:1901360 4.2.1.70 ko:K16329 ko00240,map00240 - R01055 RC00432,RC00433 ko00000,ko00001,ko01000 - - - Indigoidine_A YYD2_k127_1623829_3 765420.OSCT_0574 2.931e-73 254.0 COG2050@1|root,COG2050@2|Bacteria,2G9ZQ@200795|Chloroflexi,377IT@32061|Chloroflexia 32061|Chloroflexia Q Thioesterase superfamily - - - - - - - - - - - - 4HBT YYD2_k127_1623829_4 926569.ANT_15950 1.624e-67 238.0 COG1608@1|root,COG1608@2|Bacteria,2G6TH@200795|Chloroflexi 200795|Chloroflexi S PFAM aspartate glutamate uridylate kinase - - 2.7.4.26 ko:K06981 ko00900,ko01110,ko01130,map00900,map01110,map01130 - R10093 RC00002 ko00000,ko00001,ko01000 - - - AA_kinase YYD2_k127_1623829_0 926569.ANT_16290 9.286e-299 929.0 COG2759@1|root,COG2759@2|Bacteria,2G5QS@200795|Chloroflexi 200795|Chloroflexi F Belongs to the formate--tetrahydrofolate ligase family fhs GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.5.1.5,3.5.4.9,6.3.4.3 ko:K00288,ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00141,M00377 R00943,R01220,R01655 RC00026,RC00111,RC00202,RC00578 ko00000,ko00001,ko00002,ko01000,ko04147 - - - FTHFS YYD2_k127_1634421_2 926569.ANT_19230 2.224e-52 192.0 COG0681@1|root,COG0681@2|Bacteria,2G701@200795|Chloroflexi 200795|Chloroflexi U Belongs to the peptidase S26 family lepB - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24 YYD2_k127_1634421_0 1382306.JNIM01000001_gene3272 3.494e-147 477.0 COG0477@1|root,COG0477@2|Bacteria,2G5YG@200795|Chloroflexi 200795|Chloroflexi EGP Major facilitator superfamily MFS_1 - - - - - - - - - - - - MFS_3 YYD2_k127_1634421_1 252305.OB2597_13563 3.132e-135 437.0 COG0274@1|root,COG0274@2|Bacteria,1N8AG@1224|Proteobacteria,2TS26@28211|Alphaproteobacteria,2PDC9@252301|Oceanicola 28211|Alphaproteobacteria F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate deoC - 4.1.2.4 ko:K01619 ko00030,map00030 - R01066 RC00436,RC00437 ko00000,ko00001,ko01000 - - - DeoC YYD2_k127_1653334_0 316274.Haur_4945 3.784e-143 471.0 COG0488@1|root,COG0488@2|Bacteria,2G5VD@200795|Chloroflexi,3752Q@32061|Chloroflexia 2|Bacteria S PFAM ABC transporter related yjjK - - ko:K06158 - - - - ko00000,ko03012 - - - ABC_tran,ABC_tran_CTD,ABC_tran_Xtn YYD2_k127_1653334_2 1333998.M2A_0894 1.329e-40 159.0 2BPTF@1|root,32IKT@2|Bacteria,1RM61@1224|Proteobacteria,2UBHB@28211|Alphaproteobacteria 28211|Alphaproteobacteria - - - - - - - - - - - - - - - YYD2_k127_1653334_3 1111069.TCCBUS3UF1_p80 1.52e-07 61.0 COG1988@1|root,COG1988@2|Bacteria,1WJBJ@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S membrane-bound metal-dependent - - - ko:K07038 - - - - ko00000 - - - YdjM YYD2_k127_1653334_1 706587.Desti_3919 1.593e-73 256.0 COG0491@1|root,COG0491@2|Bacteria,1Q2C2@1224|Proteobacteria,42RVX@68525|delta/epsilon subdivisions,2WNQR@28221|Deltaproteobacteria 28221|Deltaproteobacteria S PFAM Metallo-beta-lactamase superfamily - - - - - - - - - - - - Lactamase_B YYD2_k127_1662193_0 926569.ANT_30160 6.425e-160 509.0 COG0156@1|root,COG0156@2|Bacteria,2G65Q@200795|Chloroflexi 200795|Chloroflexi H Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide bioF - 2.3.1.29 ko:K00639 ko00260,map00260 - R00371 RC00004,RC00394 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 YYD2_k127_1662193_1 1128421.JAGA01000002_gene1167 1.36e-46 173.0 COG0801@1|root,COG0801@2|Bacteria,2NPPF@2323|unclassified Bacteria 2|Bacteria H 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase folK - 2.7.6.3,4.1.2.25 ko:K00950,ko:K13940 ko00790,ko01100,map00790,map01100 M00126,M00841 R03503,R03504 RC00002,RC00017,RC00721,RC00943 ko00000,ko00001,ko00002,ko01000 - - iLJ478.TM0041 FolB,HPPK YYD2_k127_1662193_2 221288.JH992901_gene680 8.653e-07 61.0 COG0457@1|root,COG0457@2|Bacteria,1G20P@1117|Cyanobacteria,1JK6S@1189|Stigonemataceae 1117|Cyanobacteria L Tetratricopeptide repeat - - - - - - - - - - - - TPR_1,TPR_11,TPR_2,TPR_8 YYD2_k127_1669082_1 518766.Rmar_1549 5.087e-91 306.0 COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,4NE71@976|Bacteroidetes,1FIUV@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes C dehydrogenase, E1 component bfmBAB - 1.2.4.4 ko:K11381 ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130 M00036 R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997 RC00027,RC00627,RC02743,RC02883,RC02949,RC02953 br01601,ko00000,ko00001,ko00002,ko01000 - - - E1_dh,Transket_pyr,Transketolase_C YYD2_k127_1669082_0 526227.Mesil_0601 6.534e-190 607.0 COG2939@1|root,COG2939@2|Bacteria,1WJMU@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus E Serine carboxypeptidase - - - - - - - - - - - - Peptidase_S10 YYD2_k127_1669082_3 926569.ANT_14140 2.132e-86 296.0 COG0313@1|root,COG0313@2|Bacteria,2G6E3@200795|Chloroflexi 200795|Chloroflexi H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA rsmI - 2.1.1.198 ko:K07056 - - - - ko00000,ko01000,ko03009 - - - TP_methylase YYD2_k127_1669082_2 357808.RoseRS_2229 3.502e-87 313.0 COG0515@1|root,COG0515@2|Bacteria,2G7ZS@200795|Chloroflexi,3757W@32061|Chloroflexia 32061|Chloroflexia KLT Serine threonine protein kinase - - - - - - - - - - - - Pkinase YYD2_k127_1669082_5 1487953.JMKF01000006_gene5651 5.501e-31 133.0 COG3238@1|root,COG3238@2|Bacteria 2|Bacteria S Putative inner membrane exporter, YdcZ - - - ko:K09936 ko02024,map02024 - - - ko00000,ko00001,ko02000 2.A.7.21 - - DMT_YdcZ YYD2_k127_1669082_4 637390.AFOH01000123_gene530 1.193e-69 244.0 COG2200@1|root,COG2200@2|Bacteria,1MVJY@1224|Proteobacteria,1RX0F@1236|Gammaproteobacteria,2NE1A@225057|Acidithiobacillales 225057|Acidithiobacillales T Putative diguanylate phosphodiesterase - - - - - - - - - - - - EAL YYD2_k127_1669082_8 1499967.BAYZ01000141_gene6149 5.489e-07 63.0 COG2944@1|root,COG2944@2|Bacteria 2|Bacteria K sequence-specific DNA binding - - - - - - - - - - - - FGE-sulfatase,GUN4,HTH_3,TIR_2 YYD2_k127_1669082_7 582744.Msip34_0998 1.022e-14 82.0 2DQ40@1|root,334MM@2|Bacteria,1NB10@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - YYD2_k127_1669082_9 575540.Isop_3668 3.416e-06 57.0 2DVEA@1|root,33VGZ@2|Bacteria,2J2TX@203682|Planctomycetes 203682|Planctomycetes S Helix-turn-helix domain - - - - - - - - - - - - HTH_36 YYD2_k127_168129_0 926569.ANT_17530 0.0 2783.0 COG0304@1|root,COG0764@1|root,COG1028@1|root,COG3321@1|root,COG0304@2|Bacteria,COG0764@2|Bacteria,COG1028@2|Bacteria,COG3321@2|Bacteria,2G68I@200795|Chloroflexi 200795|Chloroflexi IQ PFAM short-chain dehydrogenase reductase SDR - - - ko:K15314 ko01059,ko01130,map01059,map01130 M00824,M00825 R11435 - ko00000,ko00001,ko00002,ko01008 - - - Acyl_transf_1,KAsynt_C_assoc,KR,Ketoacyl-synt_C,PP-binding,PS-DH,ketoacyl-synt YYD2_k127_168129_4 742725.HMPREF9450_02329 1.008e-12 75.0 COG4770@1|root,COG4770@2|Bacteria,4NQ86@976|Bacteroidetes,2FNTU@200643|Bacteroidia 976|Bacteroidetes I biotin-requiring enzyme - - 6.4.1.1 ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 M00173,M00620 R00344 RC00040,RC00367 ko00000,ko00001,ko00002,ko01000 - - - Biotin_lipoyl YYD2_k127_168129_2 871968.DESME_10440 1.54e-142 467.0 COG0439@1|root,COG0439@2|Bacteria,1TP16@1239|Firmicutes,25E48@186801|Clostridia,26111@186807|Peptococcaceae 186801|Clostridia I TIGRFAM acetyl-CoA carboxylase, biotin carboxylase accC - 6.3.4.14,6.4.1.2 ko:K01961 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04385 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 - - - Biotin_carb_C,Biotin_carb_N,CPSase_L_D2 YYD2_k127_168129_1 485913.Krac_12092 2.888e-204 647.0 COG4799@1|root,COG4799@2|Bacteria,2G5IX@200795|Chloroflexi 200795|Chloroflexi I PFAM carboxyl transferase - - 2.1.3.15,6.4.1.3 ko:K01966 ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200 M00373,M00741 R01859 RC00097,RC00609 ko00000,ko00001,ko00002,ko01000 - - - Carboxyl_trans YYD2_k127_168129_3 1121423.JONT01000032_gene2582 1.866e-112 378.0 COG0477@1|root,COG2814@2|Bacteria,1TPRN@1239|Firmicutes,249RZ@186801|Clostridia,2610Z@186807|Peptococcaceae 186801|Clostridia U TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - - - - - - - - - - MFS_1,Sugar_tr YYD2_k127_1714286_2 383372.Rcas_2439 1.204e-48 179.0 COG3375@1|root,COG3375@2|Bacteria,2G8MH@200795|Chloroflexi,37765@32061|Chloroflexia 32061|Chloroflexia M carboxylic acid catabolic process - - - - - - - - - - - - - YYD2_k127_1714286_0 926569.ANT_17350 6.86e-67 241.0 COG0702@1|root,COG0702@2|Bacteria,2G6I7@200795|Chloroflexi 200795|Chloroflexi M NmrA-like family - - 1.6.5.3,1.6.99.3 ko:K00329,ko:K00356 ko00190,map00190 - R11945 RC00061 ko00000,ko00001,ko01000 - - - NAD_binding_10 YYD2_k127_1714286_1 1128421.JAGA01000001_gene2030 2.402e-64 227.0 COG1524@1|root,COG1524@2|Bacteria,2NQ0M@2323|unclassified Bacteria 2|Bacteria S Type I phosphodiesterase / nucleotide pyrophosphatase - - - - - - - - - - - - Phosphodiest YYD2_k127_1734305_3 926569.ANT_02380 5.516e-103 341.0 COG0190@1|root,COG0190@2|Bacteria,2G6BA@200795|Chloroflexi 200795|Chloroflexi F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate folD GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R01220,R01655 RC00202,RC00578 ko00000,ko00001,ko00002,ko01000 - - - THF_DHG_CYH,THF_DHG_CYH_C YYD2_k127_1734305_4 518766.Rmar_2430 9.605e-61 221.0 COG2010@1|root,COG2010@2|Bacteria,4NHQV@976|Bacteroidetes 976|Bacteroidetes C PFAM Cytochrome C - - - - - - - - - - - - Cytochrom_C,Cytochrome_CBB3 YYD2_k127_1734305_0 926569.ANT_08170 4.74e-130 426.0 COG0842@1|root,COG0842@2|Bacteria,2G8VC@200795|Chloroflexi 200795|Chloroflexi V ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 YYD2_k127_1734305_1 926569.ANT_08160 1.243e-128 423.0 COG0842@1|root,COG0842@2|Bacteria,2G774@200795|Chloroflexi 200795|Chloroflexi V PFAM ABC-2 type transporter - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 YYD2_k127_1734305_2 926569.ANT_08150 2.844e-124 406.0 COG1131@1|root,COG1131@2|Bacteria,2G5WA@200795|Chloroflexi 200795|Chloroflexi V PFAM ABC transporter related - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran YYD2_k127_1762159_3 926569.ANT_08630 6.77e-33 129.0 COG0295@1|root,COG0295@2|Bacteria,2G7AW@200795|Chloroflexi 200795|Chloroflexi F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis cdd - 3.5.4.5 ko:K01489 ko00240,ko00983,ko01100,map00240,map00983,map01100 - R01878,R02485,R08221 RC00074,RC00514 ko00000,ko00001,ko01000 - - - dCMP_cyt_deam_1 YYD2_k127_1762159_1 926569.ANT_08620 8.124e-82 279.0 COG1381@1|root,COG1381@2|Bacteria,2G6N7@200795|Chloroflexi 200795|Chloroflexi L Involved in DNA repair and RecF pathway recombination recO - - ko:K03584 ko03440,map03440 - - - ko00000,ko00001,ko03400 - - - RecO_C,RecO_N YYD2_k127_1762159_4 1273125.Rrhod_2524 1.154e-16 93.0 2F1BQ@1|root,33UCK@2|Bacteria,2IACQ@201174|Actinobacteria 201174|Actinobacteria - - - - - - - - - - - - - - - YYD2_k127_1762159_2 1273125.Rrhod_2526 4.372e-50 191.0 2CGV9@1|root,333YX@2|Bacteria,2IE67@201174|Actinobacteria 201174|Actinobacteria S Capsule biosynthesis CapC - - - ko:K22116 - - - - ko00000 - - - Caps_synth_CapC YYD2_k127_1762159_0 1313172.YM304_13710 4.673e-117 390.0 COG0285@1|root,COG0285@2|Bacteria,2GKSV@201174|Actinobacteria 201174|Actinobacteria H Mur ligase middle domain capB - - ko:K01932 - - - - ko00000,ko01000 - - - Mur_ligase_M YYD2_k127_1762159_5 225937.HP15_3803 2.564e-05 52.0 COG2199@1|root,COG2199@2|Bacteria,1NV1F@1224|Proteobacteria,1T1UD@1236|Gammaproteobacteria,46A7X@72275|Alteromonadaceae 1236|Gammaproteobacteria T PAS fold - - - - - - - - - - - - GGDEF,PAS,PAS_3,PAS_4,PAS_9,dCache_1 YYD2_k127_1765107_2 635013.TherJR_0820 5.261e-81 281.0 COG1807@1|root,COG1807@2|Bacteria,1TTJ7@1239|Firmicutes,24ZXI@186801|Clostridia 186801|Clostridia M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - ko:K13687 - - - - ko00000,ko01000,ko01003 - GT89 - - YYD2_k127_1765107_4 485918.Cpin_3697 1.184e-46 184.0 COG1835@1|root,COG1835@2|Bacteria,4NPI2@976|Bacteroidetes 976|Bacteroidetes I PFAM Acyltransferase - - - - - - - - - - - - Acyl_transf_3 YYD2_k127_1765107_3 1123392.AQWL01000003_gene461 4.64e-57 205.0 COG0500@1|root,COG2226@2|Bacteria,1N0SX@1224|Proteobacteria,2VTFD@28216|Betaproteobacteria,1KSB7@119069|Hydrogenophilales 119069|Hydrogenophilales Q ubiE/COQ5 methyltransferase family - - - - - - - - - - - - - YYD2_k127_1765107_1 1128421.JAGA01000002_gene1768 1.253e-114 382.0 COG0508@1|root,COG0508@2|Bacteria,2NNZ8@2323|unclassified Bacteria 2|Bacteria C e3 binding domain bfmBB - 2.3.1.168,2.3.1.61 ko:K00658,ko:K09699 ko00020,ko00280,ko00310,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00280,map00310,map00640,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00032,M00036 R02570,R02571,R02662,R03174,R04097,R08549,R10998 RC00004,RC02727,RC02833,RC02870 br01601,ko00000,ko00001,ko00002,ko01000 - - - 2-oxoacid_dh,Biotin_lipoyl,E3_binding YYD2_k127_1765107_0 1166018.FAES_5448 3.656e-164 527.0 COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,4NE4A@976|Bacteroidetes,47KBI@768503|Cytophagia 976|Bacteroidetes C Dehydrogenase E1 component pdhB - 2.2.1.1 ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R01067,R01641,R01830,R06590 RC00032,RC00226,RC00571,RC01560 ko00000,ko00001,ko00002,ko01000 - - - E1_dh,Transket_pyr,Transketolase_C YYD2_k127_176527_0 926569.ANT_06600 1.006e-273 881.0 COG2203@1|root,COG5002@1|root,COG2203@2|Bacteria,COG5002@2|Bacteria,2G7NF@200795|Chloroflexi 200795|Chloroflexi T histidine kinase A domain protein - - - - - - - - - - - - GAF_2,HATPase_c,HisKA YYD2_k127_176527_5 926569.ANT_06610 3.964e-47 173.0 COG0745@1|root,COG0745@2|Bacteria,2G986@200795|Chloroflexi 200795|Chloroflexi T cheY-homologous receiver domain - - - - - - - - - - - - Response_reg YYD2_k127_176527_3 926569.ANT_06620 2.305e-83 284.0 COG0596@1|root,COG0596@2|Bacteria,2G8RI@200795|Chloroflexi 200795|Chloroflexi S Serine aminopeptidase, S33 - - - - - - - - - - - - Abhydrolase_1 YYD2_k127_176527_6 926569.ANT_06690 1.571e-45 172.0 COG1564@1|root,COG1564@2|Bacteria,2G6VK@200795|Chloroflexi 200795|Chloroflexi H PFAM Thiamin pyrophosphokinase, catalytic region thiN - 2.7.6.2 ko:K00949 ko00730,ko01100,map00730,map01100 - R00619 RC00002,RC00017 ko00000,ko00001,ko01000 - - - TPK_B1_binding,TPK_catalytic YYD2_k127_176527_2 926569.ANT_06700 1.006e-135 441.0 COG4143@1|root,COG4143@2|Bacteria,2G615@200795|Chloroflexi 200795|Chloroflexi P Bacterial extracellular solute-binding protein - - - ko:K02064 ko02010,map02010 M00191 - - ko00000,ko00001,ko00002,ko02000 3.A.1.19 - - SBP_bac_6 YYD2_k127_176527_1 926569.ANT_06710 1.115e-158 518.0 COG1178@1|root,COG1178@2|Bacteria,2G63A@200795|Chloroflexi 200795|Chloroflexi P Binding-protein-dependent transport system inner membrane component - - - ko:K02063 ko02010,map02010 M00191 - - ko00000,ko00001,ko00002,ko02000 3.A.1.19 - - BPD_transp_1 YYD2_k127_176527_4 926569.ANT_23590 4.399e-80 270.0 COG3842@1|root,COG3842@2|Bacteria,2G62Z@200795|Chloroflexi 200795|Chloroflexi P TOBE domain - - 3.6.3.31 ko:K02062,ko:K11072 ko02010,map02010 M00191,M00299 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.11.1,3.A.1.19 - - ABC_tran,TOBE_2 YYD2_k127_178233_2 926569.ANT_29030 8.464e-16 78.0 2EAGR@1|root,334K0@2|Bacteria,2G730@200795|Chloroflexi 200795|Chloroflexi S PFAM zinc finger, SWIM domain protein - - - - - - - - - - - - SWIM YYD2_k127_178233_1 1521187.JPIM01000019_gene372 4.763e-96 328.0 COG0477@1|root,COG2814@2|Bacteria,2GBHK@200795|Chloroflexi,376GU@32061|Chloroflexia 32061|Chloroflexia EGP major facilitator superfamily MFS_1 - - - - - - - - - - - - MFS_3 YYD2_k127_178233_0 926569.ANT_07770 2.49e-121 394.0 COG0171@1|root,COG0171@2|Bacteria,2G6X3@200795|Chloroflexi 200795|Chloroflexi H NAD synthase - - 6.3.1.5 ko:K01916 ko00760,ko01100,map00760,map01100 M00115 R00189 RC00100 ko00000,ko00001,ko00002,ko01000 - - - NAD_synthase YYD2_k127_179471_4 926569.ANT_14780 8.384e-46 173.0 COG0494@1|root,COG0494@2|Bacteria,2G7AT@200795|Chloroflexi 200795|Chloroflexi L PFAM NUDIX hydrolase - - - - - - - - - - - - NUDIX YYD2_k127_179471_3 926569.ANT_14790 1.814e-53 196.0 COG1825@1|root,COG1825@2|Bacteria,2G7A4@200795|Chloroflexi 200795|Chloroflexi J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance ctc - - ko:K02897 ko03010,map03010 M00178 - - ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L25p,Ribosomal_TL5_C YYD2_k127_179471_0 926569.ANT_20700 8.51e-174 559.0 COG4262@1|root,COG4262@2|Bacteria,2G5YS@200795|Chloroflexi 200795|Chloroflexi S Spermine/spermidine synthase domain - - - - - - - - - - - - Spermine_synth YYD2_k127_179471_5 926569.ANT_20710 7.049e-38 151.0 COG4478@1|root,COG4478@2|Bacteria,2G9EA@200795|Chloroflexi 200795|Chloroflexi S Protein of unknown function (DUF1461) - - - - - - - - - - - - DUF1461 YYD2_k127_179471_7 926569.ANT_14620 1.858e-30 128.0 COG1302@1|root,COG1302@2|Bacteria,2G7GB@200795|Chloroflexi 200795|Chloroflexi S Asp23 family, cell envelope-related function - - - - - - - - - - - - Asp23 YYD2_k127_179471_2 926569.ANT_14610 2.584e-54 194.0 COG0781@1|root,COG0781@2|Bacteria,2G6XA@200795|Chloroflexi 200795|Chloroflexi K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons nusB - - ko:K03625 - - - - ko00000,ko03009,ko03021 - - - NusB YYD2_k127_179471_8 926569.ANT_15060 1.59e-10 68.0 COG1826@1|root,COG1826@2|Bacteria 2|Bacteria U protein secretion tatB GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0040007,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - ko:K03116,ko:K03117 ko03060,ko03070,map03060,map03070 M00336 - - ko00000,ko00001,ko00002,ko02044 2.A.64 - - MttA_Hcf106 YYD2_k127_179471_1 926569.ANT_15050 5.12e-57 211.0 COG0805@1|root,COG0805@2|Bacteria,2G6SP@200795|Chloroflexi 200795|Chloroflexi U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes tatC - - ko:K03118 ko03060,ko03070,map03060,map03070 M00336 - - ko00000,ko00001,ko00002,ko02044 2.A.64 - - TatC YYD2_k127_1802453_2 324602.Caur_2628 2.251e-54 195.0 COG0412@1|root,COG0412@2|Bacteria,2G8NW@200795|Chloroflexi 200795|Chloroflexi Q PFAM Dienelactone hydrolase - - 3.1.1.45 ko:K01061 ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130 - R03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222 RC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686 ko00000,ko00001,ko01000 - - - DLH YYD2_k127_1802453_0 926569.ANT_08920 2.201e-130 422.0 COG4974@1|root,COG4974@2|Bacteria,2G6QW@200795|Chloroflexi 200795|Chloroflexi L Belongs to the 'phage' integrase family - - - ko:K04763 - - - - ko00000,ko03036 - - - Phage_int_SAM_1,Phage_integrase YYD2_k127_1802453_1 926569.ANT_08910 2.284e-94 327.0 COG0037@1|root,COG0037@2|Bacteria,2G6AD@200795|Chloroflexi 200795|Chloroflexi D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine tilS - 2.4.2.8,6.3.4.19 ko:K00760,ko:K04075,ko:K15780 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 - R00190,R01132,R01229,R02142,R08237,R08238,R08245,R09597 RC00063,RC00122,RC02633,RC02634 ko00000,ko00001,ko01000,ko03016 - - - ATP_bind_3,Pribosyltran,TilS,TilS_C YYD2_k127_1802453_3 926569.ANT_02700 2.937e-52 188.0 COG0346@1|root,COG0346@2|Bacteria,2G79M@200795|Chloroflexi 200795|Chloroflexi E PFAM Glyoxalase bleomycin resistance protein dioxygenase - - 5.1.99.1 ko:K05606 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00373,M00375,M00376,M00741 R02765,R09979 RC00780,RC02739 ko00000,ko00001,ko00002,ko01000 - - - Glyoxalase_4 YYD2_k127_1802453_4 926560.KE387023_gene2407 2.426e-31 130.0 COG1832@1|root,COG1832@2|Bacteria 2|Bacteria S CoA binding domain - - - ko:K06929 - - - - ko00000 - - - CoA_binding_2 YYD2_k127_1805363_6 383372.Rcas_2873 2.203e-13 80.0 COG1361@1|root,COG3210@1|root,COG1361@2|Bacteria,COG3210@2|Bacteria,2G8VW@200795|Chloroflexi,377DU@32061|Chloroflexia 2|Bacteria M TIGRFAM polymorphic outer membrane protein - - - ko:K21449 - - - - ko00000,ko02000 1.B.40.2 - - Beta_helix,DUF11,Sigma70_r2,zf-HC2 YYD2_k127_1805363_7 1157490.EL26_16505 7.86e-12 75.0 COG3291@1|root,COG3509@1|root,COG3291@2|Bacteria,COG3509@2|Bacteria,1UZP5@1239|Firmicutes,4HAWI@91061|Bacilli,278ZP@186823|Alicyclobacillaceae 91061|Bacilli Q Phospholipase/Carboxylesterase phaZ - - - - - - - - - - - CHB_HEX_C_1,Esterase_phd YYD2_k127_1805363_3 926569.ANT_02660 3.44e-111 373.0 COG1117@1|root,COG1117@2|Bacteria,2G646@200795|Chloroflexi 200795|Chloroflexi P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system pstB GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015114,GO:0015318,GO:0015399,GO:0015405,GO:0015415,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0034220,GO:0035435,GO:0042623,GO:0042626,GO:0043225,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0098660,GO:0098661,GO:0099133 3.6.3.27 ko:K02036 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.7 - - ABC_tran YYD2_k127_1805363_0 926569.ANT_02650 2.501e-133 429.0 COG0581@1|root,COG0581@2|Bacteria,2G6BI@200795|Chloroflexi 2|Bacteria P TIGRFAM phosphate ABC transporter, inner membrane subunit PstA pstA - - ko:K02038 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - BPD_transp_1 YYD2_k127_1805363_2 926569.ANT_02640 5.31e-114 378.0 COG0573@1|root,COG0573@2|Bacteria,2G62J@200795|Chloroflexi 200795|Chloroflexi P probably responsible for the translocation of the substrate across the membrane - - - ko:K02037 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - BPD_transp_1 YYD2_k127_1805363_1 926569.ANT_02630 3.977e-119 391.0 COG0226@1|root,COG0226@2|Bacteria,2G7T2@200795|Chloroflexi 200795|Chloroflexi P TIGRFAM phosphate binding protein pstS - - ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - PBP_like_2 YYD2_k127_1805363_4 1207055.C100_09525 1.617e-100 333.0 COG1117@1|root,COG1117@2|Bacteria,1MU16@1224|Proteobacteria,2TQX9@28211|Alphaproteobacteria,2JZZN@204457|Sphingomonadales 204457|Sphingomonadales P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system pstB - 3.6.3.27 ko:K02036 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.7 - - ABC_tran YYD2_k127_1805363_5 357808.RoseRS_1536 7.79e-34 144.0 COG1196@1|root,COG1196@2|Bacteria,2G788@200795|Chloroflexi,376Y7@32061|Chloroflexia 32061|Chloroflexia D Domain of unknown function (DUF4349) - - - - - - - - - - - - DUF4349 YYD2_k127_1805363_9 1123242.JH636436_gene355 8.272e-08 60.0 COG2318@1|root,COG2318@2|Bacteria,2J0BN@203682|Planctomycetes 203682|Planctomycetes S Protein of unknown function (DUF664) - - - - - - - - - - - - DinB_2 YYD2_k127_1805363_8 1128421.JAGA01000003_gene3731 1.936e-09 69.0 COG0642@1|root,COG2205@2|Bacteria 1128421.JAGA01000003_gene3731|- T PhoQ Sensor - - - - - - - - - - - - - YYD2_k127_1835786_1 926569.ANT_18940 7.457e-52 192.0 COG1974@1|root,COG1974@2|Bacteria,2G6NC@200795|Chloroflexi 200795|Chloroflexi K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair lexA - 3.4.21.88 ko:K01356 - M00729 - - ko00000,ko00002,ko01000,ko01002,ko03400 - - - LexA_DNA_bind,Peptidase_S24 YYD2_k127_1835786_0 886293.Sinac_6174 8.635e-83 286.0 COG0598@1|root,COG0598@2|Bacteria,2IX61@203682|Planctomycetes 203682|Planctomycetes P Mediates influx of magnesium ions corA - - ko:K03284 - - - - ko00000,ko02000 1.A.35.1,1.A.35.3 - - CorA YYD2_k127_1835786_4 926569.ANT_06720 1.188e-34 136.0 COG3877@1|root,COG3877@2|Bacteria,2G734@200795|Chloroflexi 200795|Chloroflexi S Protein of unknown function (DUF2089) - - - - - - - - - - - - DUF2089 YYD2_k127_1835786_7 340.xcc-b100_2993 3.143e-08 65.0 COG3595@1|root,COG3595@2|Bacteria,1P19T@1224|Proteobacteria,1RRSR@1236|Gammaproteobacteria,1X62K@135614|Xanthomonadales 135614|Xanthomonadales S Putative adhesin - - - - - - - - - - - - DUF4097 YYD2_k127_1835786_2 926569.ANT_06730 2.364e-36 141.0 2E4Y1@1|root,32ZRZ@2|Bacteria,2G9AY@200795|Chloroflexi 200795|Chloroflexi - - - - - - - - - - - - - - - YYD2_k127_1835786_6 479435.Kfla_6837 4.929e-12 76.0 COG3595@1|root,COG3595@2|Bacteria,2HUCV@201174|Actinobacteria,4DVNG@85009|Propionibacteriales 201174|Actinobacteria S Putative adhesin - - - - - - - - - - - - DUF4097 YYD2_k127_1835786_3 1132442.KB889752_gene2160 3.941e-36 147.0 COG0300@1|root,COG0300@2|Bacteria,1TSJ3@1239|Firmicutes,4HDU5@91061|Bacilli,1ZBRZ@1386|Bacillus 91061|Bacilli S Belongs to the short-chain dehydrogenases reductases (SDR) family yqjQ - - ko:K07124 - - - - ko00000 - - - adh_short YYD2_k127_1835786_8 1156844.KB891809_gene7570 8.406e-08 56.0 COG1307@1|root,COG1307@2|Bacteria,2GIUV@201174|Actinobacteria 201174|Actinobacteria S DegV family - - - - - - - - - - - - DegV YYD2_k127_1864643_4 1131812.JQMS01000001_gene1095 8.543e-09 56.0 2EH3B@1|root,33AVB@2|Bacteria,4NXP5@976|Bacteroidetes,1I6KT@117743|Flavobacteriia,2NWVF@237|Flavobacterium 976|Bacteroidetes - - - - - - - - - - - - - - - YYD2_k127_1864643_3 887929.HMP0721_2517 8.768e-12 68.0 2DGK2@1|root,2ZWBC@2|Bacteria,1W4NY@1239|Firmicutes 1239|Firmicutes - - - - - - - - - - - - - - - YYD2_k127_1864643_1 1160137.KB907308_gene6991 3.339e-57 209.0 COG2084@1|root,COG2084@2|Bacteria,2GTGE@201174|Actinobacteria,4G4IQ@85025|Nocardiaceae 201174|Actinobacteria I Domain of unknown function (DUF1932) - - - - - - - - - - - - DUF1932,F420_oxidored,NAD_binding_2 YYD2_k127_1864643_0 926569.ANT_01360 7.851e-86 288.0 COG0353@1|root,COG0353@2|Bacteria,2G6CT@200795|Chloroflexi 200795|Chloroflexi L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO recR - - ko:K06187 ko03440,map03440 - - - ko00000,ko00001,ko03400 - - - HHH,RecR,Toprim_4 YYD2_k127_1864643_2 926569.ANT_01350 6.324e-35 136.0 COG0718@1|root,COG0718@2|Bacteria 2|Bacteria S YbaB/EbfC DNA-binding family ybaB GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 - ko:K06187,ko:K09747 ko03440,map03440 - - - ko00000,ko00001,ko03400 - - - YbaB_DNA_bd YYD2_k127_1899924_5 1170562.Cal6303_1914 1.388e-67 234.0 COG3374@1|root,COG3374@2|Bacteria,1G545@1117|Cyanobacteria,1HRAR@1161|Nostocales 1117|Cyanobacteria S Protein of unknown function (DUF981) - - - ko:K08980 - - - - ko00000 - - - DUF981 YYD2_k127_1899924_4 926569.ANT_23120 1.218e-88 304.0 COG3764@1|root,COG3764@2|Bacteria,2G98S@200795|Chloroflexi 200795|Chloroflexi M PFAM peptidase C60, sortase A and B - - 3.4.22.70 ko:K07284 - - - - ko00000,ko01000,ko01002,ko01011 - - - Sortase YYD2_k127_1899924_3 926550.CLDAP_34690 6.032e-119 392.0 COG0075@1|root,COG0075@2|Bacteria,2G5P3@200795|Chloroflexi 200795|Chloroflexi E PFAM aminotransferase class V - - - - - - - - - - - - Aminotran_5 YYD2_k127_1899924_2 926569.ANT_24820 8.086e-148 479.0 COG2265@1|root,COG2265@2|Bacteria,2G6IV@200795|Chloroflexi 200795|Chloroflexi J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family - - 2.1.1.190 ko:K03215 - - - - ko00000,ko01000,ko03009 - - - TRAM,tRNA_U5-meth_tr YYD2_k127_1899924_0 1121015.N789_11885 1.855e-192 621.0 COG1226@1|root,COG1226@2|Bacteria,1MV0T@1224|Proteobacteria,1RYR4@1236|Gammaproteobacteria,1XB8Z@135614|Xanthomonadales 135614|Xanthomonadales P Castor and Pollux, part of voltage-gated ion channel - - - - - - - - - - - - Castor_Poll_mid YYD2_k127_1899924_1 926569.ANT_02910 2.092e-162 525.0 COG1351@1|root,COG1351@2|Bacteria,2G8EZ@200795|Chloroflexi 200795|Chloroflexi H Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - - - - - - - - - - Thy1 YYD2_k127_1901351_4 926569.ANT_00270 3.374e-53 191.0 COG0044@1|root,COG0044@2|Bacteria,2G5N4@200795|Chloroflexi 200795|Chloroflexi F Amidohydrolase family - - 3.5.2.2,3.5.2.5 ko:K01464,ko:K01466 ko00230,ko00240,ko00410,ko00770,ko00983,ko01100,ko01120,map00230,map00240,map00410,map00770,map00983,map01100,map01120 M00046,M00546 R02269,R02425,R03055,R08227 RC00632,RC00680 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Amidohydro_1 YYD2_k127_1901351_3 926569.ANT_04640 5.206e-58 207.0 COG2852@1|root,COG2852@2|Bacteria,2G78G@200795|Chloroflexi 200795|Chloroflexi S Protein conserved in bacteria - - - - - - - - - - - - - YYD2_k127_1901351_5 357808.RoseRS_2594 1.734e-09 58.0 COG1231@1|root,COG1231@2|Bacteria,2G942@200795|Chloroflexi 200795|Chloroflexi E PFAM amine oxidase - - 1.4.3.4 ko:K00274 ko00260,ko00330,ko00340,ko00350,ko00360,ko00380,ko00950,ko00982,ko01100,ko01110,ko04726,ko04728,ko05030,ko05031,ko05034,map00260,map00330,map00340,map00350,map00360,map00380,map00950,map00982,map01100,map01110,map04726,map04728,map05030,map05031,map05034 M00135 R02173,R02382,R02529,R02532,R02613,R02908,R02919,R04025,R04300,R04674,R04890,R04893,R04894,R04907,R04908,R08346,R08347,R08348,R11354 RC00062,RC00160,RC00225,RC00676,RC00807,RC00808,RC01808,RC02226,RC02713 ko00000,ko00001,ko00002,ko01000 - - - Amino_oxidase YYD2_k127_1901351_1 929562.Emtol_1464 4.91e-88 301.0 COG0350@1|root,COG2207@1|root,COG0350@2|Bacteria,COG2207@2|Bacteria,4NFYC@976|Bacteroidetes,47K38@768503|Cytophagia 976|Bacteroidetes K PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain ada - 2.1.1.63 ko:K10778 - - - - ko00000,ko01000,ko03000,ko03400 - - - DNA_binding_1,HTH_18,Methyltransf_1N YYD2_k127_1901351_0 1499967.BAYZ01000119_gene3222 2.009e-166 534.0 COG0174@1|root,COG0174@2|Bacteria,2NNY0@2323|unclassified Bacteria 2|Bacteria E glutamine synthetase glnA2 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0044464,GO:0050001,GO:0071944 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 - R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 - - - Gln-synt_C,Gln-synt_N YYD2_k127_1901351_2 368407.Memar_1274 5.88e-66 246.0 COG1404@1|root,arCOG00702@2157|Archaea 2157|Archaea O Belongs to the peptidase S8 family - - - ko:K14647 ko02024,map02024 - - - ko00000,ko00001,ko01000,ko01002,ko03110 - - - PA,PEGA,PKD,Peptidase_C1,Peptidase_S8 YYD2_k127_1935369_9 926569.ANT_13170 2.444e-38 152.0 COG4758@1|root,COG4758@2|Bacteria,2G93M@200795|Chloroflexi 200795|Chloroflexi S membrane - - - - - - - - - - - - - YYD2_k127_1935369_1 926569.ANT_00970 3.922e-202 642.0 COG1066@1|root,COG1066@2|Bacteria,2G5TE@200795|Chloroflexi 200795|Chloroflexi L DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function radA - - ko:K04485 - - - - ko00000,ko03400 - - - AAA_25,ATPase,ChlI YYD2_k127_1935369_10 926569.ANT_15180 6.099e-36 139.0 COG3536@1|root,COG3536@2|Bacteria,2G7H1@200795|Chloroflexi 200795|Chloroflexi S Protein of unknown function (DUF971) - - - - - - - - - - - - DUF971 YYD2_k127_1935369_11 926569.ANT_15190 2.516e-30 125.0 2DTJR@1|root,33KPB@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - YYD2_k127_1935369_8 926550.CLDAP_06200 3.242e-39 164.0 COG1597@1|root,COG1597@2|Bacteria,2G70R@200795|Chloroflexi 200795|Chloroflexi I PFAM diacylglycerol kinase catalytic region - - - - - - - - - - - - DAGK_cat YYD2_k127_1935369_3 926569.ANT_15210 6.476e-95 330.0 COG0515@1|root,COG0515@2|Bacteria,2G67H@200795|Chloroflexi 200795|Chloroflexi KLT SMART serine threonine protein kinase - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PASTA,Pkinase YYD2_k127_1935369_6 926569.ANT_15220 2.01e-71 249.0 COG0036@1|root,COG0036@2|Bacteria,2G6EU@200795|Chloroflexi 200795|Chloroflexi G Belongs to the ribulose-phosphate 3-epimerase family rpe - 5.1.3.1 ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007 R01529 RC00540 ko00000,ko00001,ko00002,ko01000 - - - Ribul_P_3_epim YYD2_k127_1935369_12 926569.ANT_15230 2.172e-21 94.0 COG0227@1|root,COG0227@2|Bacteria,2G7E5@200795|Chloroflexi 200795|Chloroflexi J ribosomal protein L28 rpmB - - ko:K02902 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L28 YYD2_k127_1935369_13 1151292.QEW_3104 5.934e-17 85.0 COG1302@1|root,COG1302@2|Bacteria,1V731@1239|Firmicutes,24JIA@186801|Clostridia,25RQH@186804|Peptostreptococcaceae 186801|Clostridia S Asp23 family, cell envelope-related function - - - - - - - - - - - - Asp23 YYD2_k127_1935369_0 926569.ANT_15250 7.901e-209 662.0 COG1461@1|root,COG1461@2|Bacteria,2G61Z@200795|Chloroflexi 200795|Chloroflexi S PFAM Dak phosphatase - - - ko:K07030 - - - - ko00000 - - - Dak1_2,Dak2 YYD2_k127_1935369_2 926569.ANT_06400 3.257e-134 434.0 COG1216@1|root,COG1216@2|Bacteria 2|Bacteria V Glycosyl transferase, family 2 - - - - - - - - - - - - Glycos_transf_2,Glyphos_transf YYD2_k127_1935369_5 926569.ANT_06390 4.047e-94 317.0 COG1216@1|root,COG1216@2|Bacteria 2|Bacteria V Glycosyl transferase, family 2 - - - ko:K20444 - - - - ko00000,ko01000,ko01005,ko02000 4.D.1.3 GT2,GT4 - Glycos_transf_2 YYD2_k127_1935369_7 926569.ANT_06380 7.588e-71 250.0 COG1861@1|root,COG1861@2|Bacteria,2G8I7@200795|Chloroflexi 200795|Chloroflexi M Cytidylyltransferase - - - ko:K07257 - - - - ko00000 - - - CTP_transf_3 YYD2_k127_1935369_15 489825.LYNGBM3L_74000 5.09e-06 53.0 COG5416@1|root,COG5416@2|Bacteria,1GB9T@1117|Cyanobacteria,1HH20@1150|Oscillatoriales 1117|Cyanobacteria S Pfam:DUF1049 - - - - - - - - - - - - LapA_dom YYD2_k127_1935369_4 436308.Nmar_0137 6.936e-95 326.0 COG2234@1|root,arCOG02959@2157|Archaea 2157|Archaea S Peptidase M28 ywaD2 - - - - - - - - - - - PA,Peptidase_M28 YYD2_k127_1935369_14 617140.AJZE01000062_gene2964 7.176e-14 77.0 COG2746@1|root,COG2746@2|Bacteria,1MZ5F@1224|Proteobacteria,1TK0N@1236|Gammaproteobacteria,1Y1XG@135623|Vibrionales 135623|Vibrionales V Aminoglycoside 3-N-acetyltransferase - - 2.3.1.81 ko:K00662 - - - - ko00000,ko01000,ko01504 - - - Antibiotic_NAT YYD2_k127_1939858_5 926569.ANT_19020 4.846e-10 59.0 COG0050@1|root,COG0050@2|Bacteria,2G5KI@200795|Chloroflexi 200795|Chloroflexi J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis tuf - - ko:K02358 - - - - ko00000,ko03012,ko03029,ko04147 - - - GTP_EFTU,GTP_EFTU_D2,GTP_EFTU_D3 YYD2_k127_1939858_3 926569.ANT_10030 9.538e-54 189.0 COG0051@1|root,COG0051@2|Bacteria,2G6RB@200795|Chloroflexi 200795|Chloroflexi J Involved in the binding of tRNA to the ribosomes rpsJ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02946 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S10 YYD2_k127_1939858_1 926569.ANT_10040 2.531e-99 327.0 COG0087@1|root,COG0087@2|Bacteria,2G6DQ@200795|Chloroflexi 200795|Chloroflexi J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit rplC - - ko:K02906 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L3 YYD2_k127_1939858_2 926569.ANT_10050 5.456e-81 276.0 COG0088@1|root,COG0088@2|Bacteria,2G6K2@200795|Chloroflexi 200795|Chloroflexi J Forms part of the polypeptide exit tunnel rplD GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02926 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L4 YYD2_k127_1939858_4 926569.ANT_10060 7.58e-34 132.0 COG0089@1|root,COG0089@2|Bacteria,2G73T@200795|Chloroflexi 200795|Chloroflexi J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome rplW - - ko:K02892 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L23 YYD2_k127_1939858_0 926569.ANT_10070 1.953e-149 475.0 COG0090@1|root,COG0090@2|Bacteria,2G65E@200795|Chloroflexi 200795|Chloroflexi J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity rplB GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02886 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L2,Ribosomal_L2_C YYD2_k127_195145_3 204669.Acid345_2602 2.214e-58 214.0 COG5557@1|root,COG5557@2|Bacteria,3Y3RF@57723|Acidobacteria 57723|Acidobacteria C Polysulphide reductase, NrfD - - - - - - - - - - - - NrfD YYD2_k127_195145_4 1382306.JNIM01000001_gene1047 1.304e-49 190.0 COG1290@1|root,COG1290@2|Bacteria,2G8QQ@200795|Chloroflexi 200795|Chloroflexi C Cytochrome b(N-terminal)/b6/petB - - - - - - - - - - - - Cytochrome_B YYD2_k127_195145_8 247490.KSU1_B0694 1.284e-05 57.0 COG1290@1|root,COG1290@2|Bacteria,2IYI0@203682|Planctomycetes 203682|Planctomycetes C Cytochrome b(C-terminal)/b6/petD - - - - - - - - - - - - Cytochrom_B_C YYD2_k127_195145_2 646529.Desaci_3265 2.776e-72 260.0 COG3303@1|root,COG3303@2|Bacteria,1VTAV@1239|Firmicutes,24ZND@186801|Clostridia,264N1@186807|Peptococcaceae 186801|Clostridia P Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - - - - - - - - - - - YYD2_k127_195145_7 1125863.JAFN01000001_gene2795 1.184e-17 87.0 COG0723@1|root,COG0723@2|Bacteria,1NINP@1224|Proteobacteria,42VKD@68525|delta/epsilon subdivisions,2WRHY@28221|Deltaproteobacteria 28221|Deltaproteobacteria C PFAM Rieske 2Fe-2S domain pcmE - 1.10.9.1 ko:K02636,ko:K03886 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00151,M00162 R03817,R08409 RC01002 ko00000,ko00001,ko00002,ko00194,ko01000 - - - Rieske YYD2_k127_195145_5 1238425.J07HQW2_03479 7.529e-44 169.0 COG4221@1|root,arCOG01265@2157|Archaea,2XT0E@28890|Euryarchaeota,23U0H@183963|Halobacteria 183963|Halobacteria I Belongs to the short-chain dehydrogenases reductases (SDR) family - - - - - - - - - - - - adh_short YYD2_k127_195145_0 926569.ANT_16070 7.103e-123 404.0 COG0006@1|root,COG0006@2|Bacteria,2G6AH@200795|Chloroflexi 200795|Chloroflexi E peptidase M24 - - 3.4.13.9 ko:K01271 - - - - ko00000,ko01000,ko01002 - - - AMP_N,Creatinase_N,Peptidase_M24 YYD2_k127_195145_6 266117.Rxyl_3167 2.367e-36 143.0 COG0454@1|root,COG0456@2|Bacteria 2|Bacteria K acetyltransferase - - - - - - - - - - - - Acetyltransf_10 YYD2_k127_195145_1 1434325.AZQN01000003_gene1932 5.19e-77 261.0 COG2818@1|root,COG2818@2|Bacteria,4NGRC@976|Bacteroidetes,47PXB@768503|Cytophagia 976|Bacteroidetes L PFAM methyladenine glycosylase tag - 3.2.2.20 ko:K01246 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Adenine_glyco YYD2_k127_1962032_11 46429.BV95_00046 2.551e-17 87.0 COG0350@1|root,COG0350@2|Bacteria,1N2YQ@1224|Proteobacteria,2VEUJ@28211|Alphaproteobacteria,2K4IH@204457|Sphingomonadales 204457|Sphingomonadales L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated - - 2.1.1.63 ko:K00567 - - - - ko00000,ko01000,ko03400 - - - DNA_binding_1,Methyltransf_1N YYD2_k127_1962032_8 485913.Krac_10292 7.266e-28 125.0 COG0287@1|root,COG0287@2|Bacteria,2G6BW@200795|Chloroflexi 200795|Chloroflexi E NAD-dependent glycerol-3-phosphate dehydrogenase domain protein - - 1.3.1.12 ko:K04517 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 M00025 R01728 RC00125 ko00000,ko00001,ko00002,ko01000 - - - PDH YYD2_k127_1962032_9 926569.ANT_00650 1.43e-23 104.0 COG2827@1|root,COG2827@2|Bacteria,2G9H6@200795|Chloroflexi 200795|Chloroflexi L GIY-YIG catalytic domain - - - ko:K07461 - - - - ko00000 - - - GIY-YIG YYD2_k127_1962032_3 926569.ANT_00640 8.501e-83 281.0 COG0503@1|root,COG0503@2|Bacteria,2G8J8@200795|Chloroflexi 200795|Chloroflexi F Phosphoribosyl transferase domain - - 2.4.2.7 ko:K00759 ko00230,ko01100,map00230,map01100 - R00190,R01229,R04378 RC00063 ko00000,ko00001,ko01000,ko04147 - - - Pribosyltran YYD2_k127_1962032_10 926569.ANT_00680 9.675e-21 93.0 COG4481@1|root,COG4481@2|Bacteria,2G7GI@200795|Chloroflexi 200795|Chloroflexi S Bacterial protein of unknown function (DUF951) - - - - - - - - - - - - DUF951 YYD2_k127_1962032_2 1035308.AQYY01000002_gene479 1.497e-113 377.0 COG0707@1|root,COG0707@2|Bacteria,1UZ4A@1239|Firmicutes,249EE@186801|Clostridia 186801|Clostridia M PFAM Monogalactosyldiacylglycerol synthase - - 2.4.1.315 ko:K03429 ko00561,ko01100,map00561,map01100 - R02689,R04377 RC00005,RC00059 ko00000,ko00001,ko01000,ko01003 - GT28 - Glyco_tran_28_C,Glyco_trans_1_4,MGDG_synth YYD2_k127_1962032_6 926569.ANT_31670 8.129e-50 183.0 COG0802@1|root,COG0802@2|Bacteria,2G6YV@200795|Chloroflexi 200795|Chloroflexi S Threonylcarbamoyl adenosine biosynthesis protein TsaE - - - ko:K06925 - - - - ko00000,ko03016 - - - TsaE YYD2_k127_1962032_5 926569.ANT_31660 3.05e-72 250.0 COG1214@1|root,COG1214@2|Bacteria,2G6VT@200795|Chloroflexi 200795|Chloroflexi O PFAM peptidase M22 glycoprotease - - - ko:K14742 - - - - ko00000,ko03016 - - - Peptidase_M22 YYD2_k127_1962032_7 926569.ANT_31650 1.537e-38 149.0 COG0454@1|root,COG0456@2|Bacteria,2G6TF@200795|Chloroflexi 200795|Chloroflexi K Ribosomal-protein-alanine acetyltransferase rimI - 2.3.1.128 ko:K03789 - - - - ko00000,ko01000,ko03009 - - - Acetyltransf_1 YYD2_k127_1962032_4 1382306.JNIM01000001_gene97 1.945e-74 256.0 COG1573@1|root,COG1573@2|Bacteria,2G6BR@200795|Chloroflexi 200795|Chloroflexi L TIGRFAM phage SPO1 DNA polymerase-related protein - - 3.2.2.27 ko:K21929 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - UDG YYD2_k127_1962032_0 926569.ANT_31630 2e-211 663.0 COG0677@1|root,COG0677@2|Bacteria,2G5PP@200795|Chloroflexi 200795|Chloroflexi M PFAM UDP-glucose GDP-mannose dehydrogenase - - 1.1.1.136 ko:K13015 ko00520,map00520 - R00421 RC00291 ko00000,ko00001,ko01000,ko01005 - - - UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N YYD2_k127_1962032_1 926569.ANT_31620 4.638e-129 422.0 COG0451@1|root,COG0451@2|Bacteria,2G6S4@200795|Chloroflexi 200795|Chloroflexi M Short-chain dehydrogenase reductase SDR - - 5.1.3.6 ko:K08679 ko00520,ko01100,map00520,map01100 - R01385 RC00289 ko00000,ko00001,ko01000 - - - Epimerase,GDP_Man_Dehyd YYD2_k127_1962032_12 1336208.JADY01000010_gene3351 1.821e-15 89.0 COG2244@1|root,COG2244@2|Bacteria,1RDQG@1224|Proteobacteria,2U27A@28211|Alphaproteobacteria 28211|Alphaproteobacteria S PFAM polysaccharide biosynthesis protein - - - - - - - - - - - - Polysacc_synt,Polysacc_synt_3 YYD2_k127_1990530_12 357808.RoseRS_2796 1.383e-14 85.0 COG1840@1|root,COG2304@1|root,COG1840@2|Bacteria,COG2304@2|Bacteria,2G8ES@200795|Chloroflexi,3759V@32061|Chloroflexia 32061|Chloroflexia P PFAM von Willebrand factor type A - - - ko:K07114 - - - - ko00000,ko02000 1.A.13.2.2,1.A.13.2.3 - - SBP_bac_11,VWA YYD2_k127_1990530_8 886293.Sinac_1819 6.474e-27 121.0 COG1716@1|root,COG1716@2|Bacteria,2J1IJ@203682|Planctomycetes 203682|Planctomycetes T Inner membrane component of T3SS, cytoplasmic domain - - - - - - - - - - - - Yop-YscD_cpl YYD2_k127_1990530_10 530564.Psta_4147 3.861e-22 105.0 COG1310@1|root,COG1310@2|Bacteria 2|Bacteria S proteolysis - - - ko:K03665 - - - - ko00000,ko03009 - - - JAB,Prok-JAB YYD2_k127_1990530_14 886293.Sinac_1733 5.62e-10 63.0 2EFHE@1|root,3399Z@2|Bacteria,2J10E@203682|Planctomycetes 203682|Planctomycetes S WXG100 protein secretion system (Wss), protein YukD - - - - - - - - - - - - YukD YYD2_k127_1990530_7 326424.FRAAL0854 9.173e-36 147.0 COG5078@1|root,COG5078@2|Bacteria 2|Bacteria O protein modification by small protein conjugation - - - - - - - - - - - - ThiF,UQ_con,Yop-YscD_cpl YYD2_k127_1990530_2 886293.Sinac_1731 1.57e-101 350.0 COG0476@1|root,COG0476@2|Bacteria,2IY9K@203682|Planctomycetes 203682|Planctomycetes H PFAM UBA THIF-type NAD FAD binding protein - - - - - - - - - - - - ThiF YYD2_k127_1990530_13 557598.LHK_02842 8.084e-11 75.0 COG2186@1|root,COG2186@2|Bacteria,1MUP9@1224|Proteobacteria,2VQ0Q@28216|Betaproteobacteria,2KRA7@206351|Neisseriales 206351|Neisseriales K Psort location Cytoplasmic, score 8.96 pdhR - - ko:K05799 - - - - ko00000,ko03000 - - - FCD,GntR YYD2_k127_1990530_11 309801.trd_0138 6.15e-18 87.0 COG2329@1|root,COG2329@2|Bacteria,2G9HF@200795|Chloroflexi,27YNW@189775|Thermomicrobia 189775|Thermomicrobia S Antibiotic biosynthesis monooxygenase - - - - - - - - - - - - ABM YYD2_k127_1990530_5 926569.ANT_18950 2.867e-48 175.0 COG0222@1|root,COG0222@2|Bacteria,2G700@200795|Chloroflexi 200795|Chloroflexi J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation rplL - - ko:K02935 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L12,Ribosomal_L12_N YYD2_k127_1990530_6 926569.ANT_18960 1.542e-47 177.0 COG0244@1|root,COG0244@2|Bacteria,2G6XJ@200795|Chloroflexi 200795|Chloroflexi J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors rplJ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02864 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L10 YYD2_k127_1990530_1 926569.ANT_18970 3.769e-104 343.0 COG0081@1|root,COG0081@2|Bacteria,2G6AW@200795|Chloroflexi 200795|Chloroflexi J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release rplA GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02863 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L1 YYD2_k127_1990530_4 926569.ANT_18980 2.676e-69 237.0 COG0080@1|root,COG0080@2|Bacteria,2G6FF@200795|Chloroflexi 200795|Chloroflexi J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors rplK GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02867 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L11,Ribosomal_L11_N YYD2_k127_1990530_3 926569.ANT_18990 1.302e-95 321.0 COG0250@1|root,COG0250@2|Bacteria,2G6A3@200795|Chloroflexi 200795|Chloroflexi K Participates in transcription elongation, termination and antitermination nusG - - ko:K02601 - - - - ko00000,ko03009,ko03021 - - - KOW,NusG YYD2_k127_1990530_15 926569.ANT_19000 4.566e-09 59.0 COG0690@1|root,COG0690@2|Bacteria 2|Bacteria U P-P-bond-hydrolysis-driven protein transmembrane transporter activity secE GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 - - SecE YYD2_k127_1990530_9 926569.ANT_19010 7.248e-26 106.0 COG0267@1|root,COG0267@2|Bacteria,2G7GT@200795|Chloroflexi 200795|Chloroflexi J Belongs to the bacterial ribosomal protein bL33 family rpmG - - ko:K02913 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L33 YYD2_k127_1990530_0 926569.ANT_19020 4.49e-228 709.0 COG0050@1|root,COG0050@2|Bacteria,2G5KI@200795|Chloroflexi 200795|Chloroflexi J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis tuf - - ko:K02358 - - - - ko00000,ko03012,ko03029,ko04147 - - - GTP_EFTU,GTP_EFTU_D2,GTP_EFTU_D3 YYD2_k127_2028384_2 926569.ANT_06210 5.918e-104 352.0 COG2720@1|root,COG2720@2|Bacteria,2G67R@200795|Chloroflexi 200795|Chloroflexi V PFAM VanW family protein - - - - - - - - - - - - G5,PG_binding_4,VanW YYD2_k127_2028384_6 1121440.AUMA01000003_gene2988 5.223e-26 120.0 COG2020@1|root,COG2020@2|Bacteria,1MWU6@1224|Proteobacteria,42X7G@68525|delta/epsilon subdivisions,2WSX9@28221|Deltaproteobacteria,2MDSS@213115|Desulfovibrionales 28221|Deltaproteobacteria O methyltransferase activity - - - - - - - - - - - - NnrU,PEMT YYD2_k127_2028384_0 670487.Ocepr_1935 1.184e-255 813.0 COG0433@1|root,COG1196@1|root,COG0433@2|Bacteria,COG1196@2|Bacteria,1WM64@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus D nuclear chromosome segregation - - - - - - - - - - - - - YYD2_k127_2028384_3 1128421.JAGA01000002_gene1498 1.594e-74 264.0 COG1502@1|root,COG1502@2|Bacteria,2NQ5Z@2323|unclassified Bacteria 2|Bacteria I PLD-like domain - - 3.1.4.4 ko:K17717 ko00564,ko00565,ko01100,ko01110,map00564,map00565,map01100,map01110 - R01310,R02051,R07385 RC00017,RC00425 ko00000,ko00001,ko01000 - - - PLDc_2 YYD2_k127_2028384_5 485913.Krac_4709 6.889e-38 154.0 COG0454@1|root,COG0456@2|Bacteria 2|Bacteria K acetyltransferase - - 2.3.1.4 ko:K00621 ko00520,map00520 - R02058 RC00004,RC00166 ko00000,ko00001,ko01000 - - - Acetyltransf_1 YYD2_k127_2028384_1 926569.ANT_25910 1.749e-148 486.0 COG0728@1|root,COG0728@2|Bacteria,2G5MD@200795|Chloroflexi 2|Bacteria S Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane murJ - - ko:K03980 - - - - ko00000,ko01011,ko02000 2.A.66.4 - - MVIN YYD2_k127_2028384_4 926569.ANT_26250 6.431e-47 174.0 COG1963@1|root,COG1963@2|Bacteria,2G6XC@200795|Chloroflexi 200795|Chloroflexi S Divergent PAP2 family - - - ko:K09775 - - - - ko00000 - - - DUF212 YYD2_k127_2028384_8 926569.ANT_26240 1.89e-06 50.0 COG1722@1|root,COG1722@2|Bacteria,2G7IN@200795|Chloroflexi 200795|Chloroflexi L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides xseB - 3.1.11.6 ko:K03602 ko03430,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - Exonuc_VII_S YYD2_k127_2029009_2 926569.ANT_31760 1.529e-91 306.0 COG1428@1|root,COG1428@2|Bacteria 2|Bacteria F Deoxynucleoside kinase dgk - 2.7.1.113 ko:K15518 ko00230,map00230 - R01967 RC00002,RC00017 ko00000,ko00001,ko01000 - - - HPPK,dNK YYD2_k127_2029009_3 926569.ANT_02410 5.471e-90 307.0 COG0438@1|root,COG0438@2|Bacteria 2|Bacteria M transferase activity, transferring glycosyl groups pelF - - ko:K21011,ko:K21012 ko02025,map02025 - - - ko00000,ko00001,ko01003 - GT4 - DUF3492,Glyco_trans_1_4,Glycos_transf_1 YYD2_k127_2029009_1 926569.ANT_23150 1.129e-121 400.0 COG0438@1|root,COG0438@2|Bacteria 2|Bacteria M transferase activity, transferring glycosyl groups - - - - - - - - - - - - Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1 YYD2_k127_2029009_5 1254432.SCE1572_49735 1.562e-65 231.0 COG2227@1|root,COG2227@2|Bacteria,1R7WN@1224|Proteobacteria 1224|Proteobacteria H Methyltransferase domain - - - - - - - - - - - - Methyltransf_23 YYD2_k127_2029009_4 926569.ANT_01660 6.8e-77 261.0 COG0311@1|root,COG0311@2|Bacteria,2G6JN@200795|Chloroflexi 200795|Chloroflexi H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS pdxT GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1902494,GO:1903600 4.3.3.6 ko:K08681 ko00750,map00750 - R07456 RC00010,RC01783,RC03043 ko00000,ko00001,ko01000 - - - SNO YYD2_k127_2029009_0 926569.ANT_01650 5.162e-157 498.0 COG0214@1|root,COG0214@2|Bacteria,2G5MW@200795|Chloroflexi 200795|Chloroflexi H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively pdxS - 4.3.3.6 ko:K06215 ko00750,map00750 - R07456 RC00010,RC01783,RC03043 ko00000,ko00001,ko01000 - - - SOR_SNZ YYD2_k127_2029009_8 926569.ANT_00080 3.086e-37 144.0 COG1725@1|root,COG1725@2|Bacteria,2G7C5@200795|Chloroflexi 200795|Chloroflexi K PFAM regulatory protein GntR HTH - - - ko:K07979 - - - - ko00000,ko03000 - - - GntR YYD2_k127_2029009_7 926569.ANT_00090 6.443e-45 167.0 COG0330@1|root,COG0330@2|Bacteria,2G5SB@200795|Chloroflexi 2|Bacteria O PFAM band 7 protein hflC - - - - - - - - - - - Band_7 YYD2_k127_203755_11 1089544.KB912942_gene210 2.261e-27 113.0 2C73B@1|root,330Z7@2|Bacteria,2IIMQ@201174|Actinobacteria,4E6EA@85010|Pseudonocardiales 201174|Actinobacteria - - - - - - - - - - - - - - DUF998 YYD2_k127_203755_2 134676.ACPL_2116 2.78e-100 338.0 COG1502@1|root,COG1502@2|Bacteria 2|Bacteria I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol - - - - - - - - - - - - PLDc_2 YYD2_k127_203755_4 118166.JH976537_gene4842 2.638e-76 262.0 COG2135@1|root,COG2135@2|Bacteria,1G1SA@1117|Cyanobacteria,1HAGW@1150|Oscillatoriales 1117|Cyanobacteria S Belongs to the SOS response-associated peptidase family - - - - - - - - - - - - SRAP YYD2_k127_203755_5 204669.Acid345_2380 1.488e-71 258.0 COG0477@1|root,COG0477@2|Bacteria,3Y334@57723|Acidobacteria,2JIV9@204432|Acidobacteriia 204432|Acidobacteriia EGP Transmembrane secretion effector - - - - - - - - - - - - MFS_3 YYD2_k127_203755_0 926569.ANT_07430 3.068e-118 392.0 COG0739@1|root,COG1388@1|root,COG0739@2|Bacteria,COG1388@2|Bacteria,2G6Q7@200795|Chloroflexi 200795|Chloroflexi M Peptidoglycan-binding LysM - - - - - - - - - - - - LysM,Peptidase_M23,SH3_3 YYD2_k127_203755_9 595460.RRSWK_00516 2.811e-35 143.0 COG1595@1|root,COG1595@2|Bacteria 2|Bacteria K DNA-templated transcription, initiation - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 YYD2_k127_203755_8 797209.ZOD2009_14431 9.821e-43 162.0 COG3358@1|root,arCOG04570@2157|Archaea,2XX3J@28890|Euryarchaeota,23VM5@183963|Halobacteria 183963|Halobacteria S Protein of unknown function (DUF1684) - - - ko:K09164 - - - - ko00000 - - - DUF1684 YYD2_k127_203755_12 556269.ACDQ01000003_gene1440 9.053e-17 87.0 COG0745@1|root,COG0745@2|Bacteria,1MY2Z@1224|Proteobacteria,2VIT4@28216|Betaproteobacteria,472HT@75682|Oxalobacteraceae 28216|Betaproteobacteria K phosphate regulon transcriptional regulatory protein PhoB phoB - - ko:K07657 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C YYD2_k127_203755_7 926569.ANT_08670 4.737e-53 193.0 COG1514@1|root,COG1514@2|Bacteria,2G76S@200795|Chloroflexi 200795|Chloroflexi J Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester ligT - 3.1.4.58 ko:K01975 - - - - ko00000,ko01000,ko03016 - - - LigT_PEase YYD2_k127_203755_10 926569.ANT_08660 7.989e-34 133.0 COG0799@1|root,COG0799@2|Bacteria,2G77A@200795|Chloroflexi 200795|Chloroflexi J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation rsfS - - ko:K09710 - - - - ko00000,ko03009 - - - RsfS YYD2_k127_203755_6 926569.ANT_18710 5.853e-70 239.0 COG0105@1|root,COG0105@2|Bacteria,2G6NP@200795|Chloroflexi 200795|Chloroflexi F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate ndk GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 ko:K00940 ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016 M00049,M00050,M00052,M00053 R00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895 RC00002 ko00000,ko00001,ko00002,ko01000,ko04131 - - - NDK YYD2_k127_203755_1 926569.ANT_18700 8.165e-112 394.0 COG0457@1|root,COG0457@2|Bacteria,2G70Z@200795|Chloroflexi 200795|Chloroflexi O Tetratricopeptide TPR_2 repeat protein - - - - - - - - - - - - Sigma70_r1_1,TPR_16,TPR_19,TPR_8 YYD2_k127_203755_3 926569.ANT_22870 1.624e-95 320.0 COG0213@1|root,COG0213@2|Bacteria,2G64G@200795|Chloroflexi 200795|Chloroflexi F PFAM glycosyl transferase family 3 pdp - 2.4.2.2 ko:K00756 ko00240,ko01100,map00240,map01100 - R01570,R01876,R02296,R02484 RC00063 ko00000,ko00001,ko01000 - - - Glycos_trans_3N,Glycos_transf_3,PYNP_C YYD2_k127_203755_13 1265313.HRUBRA_01354 0.0003881 44.0 COG0019@1|root,COG0019@2|Bacteria,1MUA6@1224|Proteobacteria,1RM8C@1236|Gammaproteobacteria 1236|Gammaproteobacteria E Belongs to the Orn Lys Arg decarboxylase class-II family - - 4.1.1.20 ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R00451 RC00299 ko00000,ko00001,ko00002,ko01000 - - - Orn_Arg_deC_N,Orn_DAP_Arg_deC YYD2_k127_208412_1 926569.ANT_11950 9.969e-182 576.0 COG0646@1|root,COG0685@1|root,COG0646@2|Bacteria,COG0685@2|Bacteria,2G674@200795|Chloroflexi 200795|Chloroflexi H Homocysteine S-methyltransferase - - 1.5.1.20,2.1.1.10 ko:K00297,ko:K00547 ko00270,ko00670,ko00720,ko01100,ko01110,ko01120,ko01200,ko01523,map00270,map00670,map00720,map01100,map01110,map01120,map01200,map01523 M00377 R00650,R01224,R07168 RC00003,RC00035,RC00081 ko00000,ko00001,ko00002,ko01000 - - - MTHFR,S-methyl_trans YYD2_k127_208412_6 765420.OSCT_2049 2.074e-25 123.0 28WAV@1|root,2ZIBB@2|Bacteria 2|Bacteria S PQQ-like domain - - - - - - - - - - - - PQQ_2 YYD2_k127_208412_2 926569.ANT_11940 2.63e-112 368.0 COG1521@1|root,COG1521@2|Bacteria,2G6B4@200795|Chloroflexi 200795|Chloroflexi F Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis coaX - 2.7.1.33 ko:K03525 ko00770,ko01100,map00770,map01100 M00120 R02971,R03018,R04391 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - Pan_kinase YYD2_k127_208412_4 643648.Slip_0153 1.808e-53 207.0 COG1696@1|root,COG1696@2|Bacteria,1TP52@1239|Firmicutes,248V4@186801|Clostridia,42KJI@68298|Syntrophomonadaceae 186801|Clostridia M MBOAT, membrane-bound O-acyltransferase family dltB - - ko:K03739,ko:K19294 ko01503,ko02020,ko05150,map01503,map02020,map05150 M00725 - - ko00000,ko00001,ko00002,ko01504 - - - MBOAT YYD2_k127_208412_5 1210884.HG799474_gene15133 1.536e-27 123.0 COG3209@1|root,COG3209@2|Bacteria 2|Bacteria M self proteolysis - - - - - - - - - - - - CHU_C,VCBS YYD2_k127_208412_10 1210884.HG799474_gene15133 5.399e-11 76.0 COG3209@1|root,COG3209@2|Bacteria 2|Bacteria M self proteolysis - - - - - - - - - - - - CHU_C,VCBS YYD2_k127_208412_7 1206732.BAGD01000278_gene6320 2.261e-19 101.0 COG0726@1|root,COG0726@2|Bacteria,2HET1@201174|Actinobacteria,4FUSG@85025|Nocardiaceae 201174|Actinobacteria G Polysaccharide deacetylase - - - - - - - - - - - - Polysacc_deac_1 YYD2_k127_208412_9 1116232.AHBF01000137_gene1924 3.115e-14 77.0 2AYAN@1|root,31QD6@2|Bacteria,2H0HE@201174|Actinobacteria 201174|Actinobacteria - - - - - - - - - - - - - - - YYD2_k127_208412_3 309801.trd_0641 1.586e-101 341.0 COG0016@1|root,COG0016@2|Bacteria,2G5T1@200795|Chloroflexi,27XFG@189775|Thermomicrobia 189775|Thermomicrobia J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily pheS - 6.1.1.20 ko:K01889 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Phe_tRNA-synt_N,tRNA-synt_2d YYD2_k127_208412_0 926569.ANT_24980 1.166e-321 1004.0 COG0072@1|root,COG0073@1|root,COG0072@2|Bacteria,COG0073@2|Bacteria,2G5QR@200795|Chloroflexi 200795|Chloroflexi J phenylalanyl-tRNA synthetase beta subunit pheT - 6.1.1.20 ko:K01890 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - B3_4,B5,FDX-ACB,tRNA_bind YYD2_k127_2101088_3 1142394.PSMK_31400 4.607e-12 72.0 COG2189@1|root,COG2189@2|Bacteria,2J0J2@203682|Planctomycetes 203682|Planctomycetes L DNA methylase - - 2.1.1.72 ko:K00571 - - - - ko00000,ko01000,ko02048 - - - N6_N4_Mtase YYD2_k127_2101088_2 926569.ANT_06810 2.251e-61 219.0 COG0745@1|root,COG0745@2|Bacteria 926569.ANT_06810|- T phosphorelay signal transduction system - - - - - - - - - - - - - YYD2_k127_2101088_0 926569.ANT_16170 1.614e-222 694.0 COG0499@1|root,COG0499@2|Bacteria,2G5X8@200795|Chloroflexi 200795|Chloroflexi H May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine ahcY - 3.3.1.1 ko:K01251 ko00270,ko01100,map00270,map01100 M00035 R00192,R04936 RC00056,RC00069,RC01161,RC01243 ko00000,ko00001,ko00002,ko01000,ko01009,ko04147 - - - AdoHcyase,AdoHcyase_NAD YYD2_k127_2101088_1 926569.ANT_16180 9.648e-132 428.0 COG0524@1|root,COG0524@2|Bacteria,2G7YR@200795|Chloroflexi 200795|Chloroflexi G PFAM PfkB domain protein adoK - 2.7.1.20 ko:K00856 ko00230,ko01100,map00230,map01100 - R00185 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PfkB YYD2_k127_2111937_1 765420.OSCT_2196 1.229e-136 447.0 COG1744@1|root,COG1744@2|Bacteria,2G6CN@200795|Chloroflexi 200795|Chloroflexi M ABC transporter substrate-binding protein PnrA-like - - - ko:K02058,ko:K07335 - M00221 - - ko00000,ko00002,ko02000 3.A.1.2 - - Bmp YYD2_k127_2111937_0 864702.OsccyDRAFT_1800 5.054e-163 526.0 COG3845@1|root,COG3845@2|Bacteria,1G4UA@1117|Cyanobacteria,1HH79@1150|Oscillatoriales 1117|Cyanobacteria S ATPases associated with a variety of cellular activities - - 3.6.3.17 ko:K02056 - M00221 - - ko00000,ko00002,ko01000,ko02000 3.A.1.2 - - ABC_tran YYD2_k127_2141552_2 255470.cbdbA9 3.826e-19 90.0 COG1748@1|root,COG1748@2|Bacteria,2GAK7@200795|Chloroflexi,34CMU@301297|Dehalococcoidia 301297|Dehalococcoidia E Saccharopine dehydrogenase NADP binding domain - - - - - - - - - - - - Sacchrp_dh_NADP YYD2_k127_2141552_1 234267.Acid_3965 3.095e-80 301.0 COG3210@1|root,COG3210@2|Bacteria 2|Bacteria U domain, Protein - - - ko:K15125 ko05133,map05133 - - - ko00000,ko00001,ko00536 - - - Beta_helix,CUB,Calx-beta,DUF3739,Haemagg_act,SdrD_B YYD2_k127_2141552_3 311424.DhcVS_7 5.866e-10 63.0 COG1748@1|root,COG1748@2|Bacteria,2GAK7@200795|Chloroflexi,34CMU@301297|Dehalococcoidia 301297|Dehalococcoidia E Saccharopine dehydrogenase NADP binding domain - - - - - - - - - - - - Sacchrp_dh_NADP YYD2_k127_2141552_0 1131814.JAFO01000001_gene3315 2.288e-147 477.0 COG3459@1|root,COG3459@2|Bacteria,1MVNX@1224|Proteobacteria,2TSAJ@28211|Alphaproteobacteria,3EYBF@335928|Xanthobacteraceae 28211|Alphaproteobacteria G Glycosyl hydrolase 36 superfamily, catalytic domain ndvB GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.321 ko:K13688,ko:K18786 - - R10832 RC00397 ko00000,ko01000,ko01003 - GH94,GT84 - Glyco_hydro_36,Glyco_transf_36,Glycoamylase YYD2_k127_2155422_0 926569.ANT_01340 1.501e-147 483.0 COG2812@1|root,COG2812@2|Bacteria,2G5PK@200795|Chloroflexi 200795|Chloroflexi L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity dnaX - 2.7.7.7 ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_delta2,DNA_pol3_gamma3 YYD2_k127_2155422_3 926569.ANT_01330 6.103e-28 121.0 COG2333@1|root,COG2333@2|Bacteria 2|Bacteria N competence protein COMEC ycaI GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - ko:K02238 - M00429 - - ko00000,ko00002,ko02044 3.A.11.1,3.A.11.2 - - Competence,DUF4131,Lactamase_B YYD2_k127_2155422_2 1388763.O165_019835 5.939e-52 195.0 COG2264@1|root,COG2264@2|Bacteria,1MUPC@1224|Proteobacteria,1RNAR@1236|Gammaproteobacteria,1YV0U@136845|Pseudomonas putida group 1236|Gammaproteobacteria J Ribosomal protein L11 methyltransferase prmA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006480,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018011,GO:0018012,GO:0018022,GO:0018023,GO:0018193,GO:0018194,GO:0018205,GO:0019538,GO:0031365,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 - ko:K02687 - - - - ko00000,ko01000,ko03009 - - - PrmA YYD2_k127_2155422_1 1304284.L21TH_1367 1.681e-115 383.0 COG0484@1|root,COG0484@2|Bacteria,1TP00@1239|Firmicutes,248EM@186801|Clostridia,36E5A@31979|Clostridiaceae 186801|Clostridia O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins dnaJ - - ko:K03686,ko:K05516 - - - - ko00000,ko03029,ko03036,ko03110 - - - DnaJ,DnaJ_C,DnaJ_CXXCXGXG YYD2_k127_2157010_1 1121324.CLIT_2c00800 1.122e-51 187.0 COG1032@1|root,COG1032@2|Bacteria,1UYAF@1239|Firmicutes,24D1D@186801|Clostridia 186801|Clostridia C PFAM Radical SAM - - - - - - - - - - - - B12-binding,Radical_SAM YYD2_k127_2157010_0 251221.35211855 1.177e-97 337.0 COG1032@1|root,COG1032@2|Bacteria,1G3ZK@1117|Cyanobacteria 1117|Cyanobacteria C TIGRFAM Hopanoid biosynthesis associated radical SAM protein HpnJ - - 1.21.98.3 ko:K04034 ko00860,ko01100,ko01110,map00860,map01100,map01110 - R06268,R06269,R06270 RC00741,RC01491,RC01492 ko00000,ko00001,ko01000 - - - B12-binding,Radical_SAM YYD2_k127_2157010_2 697284.ERIC2_c35460 1.857e-05 57.0 COG4346@1|root,COG5650@1|root,COG4346@2|Bacteria,COG5650@2|Bacteria,1TSHX@1239|Firmicutes,4ISHD@91061|Bacilli,26SCF@186822|Paenibacillaceae 91061|Bacilli O Glycosyl transferase - - 2.4.1.109 ko:K00728 ko00514,ko00515,ko01100,map00514,map00515,map01100 - R04072,R07620,R11399 RC00005,RC00059,RC00397 ko00000,ko00001,ko01000,ko01003 - GT39 - F5_F8_type_C,GT87,PMT,PMT_2,PMT_4TMC YYD2_k127_2193659_14 644548.SCNU_07878 1.929e-05 46.0 COG0211@1|root,COG0211@2|Bacteria,2IQDI@201174|Actinobacteria,4GEFI@85026|Gordoniaceae 201174|Actinobacteria J Ribosomal L27 protein rpmA GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0008150,GO:0015934,GO:0016020,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - ko:K02899 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L27 YYD2_k127_2193659_8 926569.ANT_25140 9.947e-53 190.0 COG0202@1|root,COG0254@1|root,COG0202@2|Bacteria,COG0254@2|Bacteria,2G75A@200795|Chloroflexi 200795|Chloroflexi J Binds the 23S rRNA rpmE - - ko:K02909 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L31 YYD2_k127_2193659_5 926569.ANT_14160 1.143e-81 276.0 COG1435@1|root,COG1435@2|Bacteria,2G6DP@200795|Chloroflexi 200795|Chloroflexi F PFAM thymidine kinase tdk GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 ko:K00857 ko00240,ko00983,ko01100,map00240,map00983,map01100 - R01567,R02099,R08233 RC00002,RC00017 ko00000,ko00001,ko01000 - - - TK YYD2_k127_2193659_6 926569.ANT_14170 5.998e-72 250.0 COG0634@1|root,COG0634@2|Bacteria,2G6HX@200795|Chloroflexi 200795|Chloroflexi F Belongs to the purine pyrimidine phosphoribosyltransferase family - - 2.4.2.8 ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 - R00190,R01132,R01229,R02142,R08237,R08238,R08245 RC00063,RC00122 ko00000,ko00001,ko01000 - - - Pribosyltran YYD2_k127_2193659_3 926569.ANT_14180 1.256e-133 445.0 COG0617@1|root,COG0617@2|Bacteria,2G6B7@200795|Chloroflexi 200795|Chloroflexi J PFAM Polynucleotide adenylyltransferase region - - 2.7.7.19,2.7.7.72 ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 - R09382,R09383,R09384,R09386 RC00078 ko00000,ko00001,ko01000,ko03016,ko03019 - - - HD,PolyA_pol,PolyA_pol_RNAbd,tRNA_NucTran2_2 YYD2_k127_2193659_10 478741.JAFS01000002_gene159 2.385e-48 179.0 COG0417@1|root,COG0417@2|Bacteria,46SS2@74201|Verrucomicrobia,37GNT@326457|unclassified Verrucomicrobia 74201|Verrucomicrobia L RNase_H superfamily - - - ko:K06877 - - - - ko00000 - - - RNase_H_2 YYD2_k127_2193659_9 926569.ANT_14190 1.139e-52 195.0 COG2267@1|root,COG2267@2|Bacteria,2GBHH@200795|Chloroflexi 200795|Chloroflexi I Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) - - - - - - - - - - - - Abhydrolase_1 YYD2_k127_2193659_13 926569.ANT_14220 5.663e-29 123.0 COG0745@1|root,COG0745@2|Bacteria 926569.ANT_14220|- T phosphorelay signal transduction system - - - - - - - - - - - - - YYD2_k127_2193659_0 926569.ANT_14230 0.0 1386.0 COG0574@1|root,COG1080@1|root,COG0574@2|Bacteria,COG1080@2|Bacteria,2G5W2@200795|Chloroflexi 200795|Chloroflexi G Belongs to the PEP-utilizing enzyme family ppdK - 2.7.9.1 ko:K01006 ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200 M00169,M00171,M00172,M00173 R00206 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000 - - - PEP-utilizers,PEP-utilizers_C,PPDK_N YYD2_k127_2193659_11 525904.Tter_2170 1.257e-41 164.0 COG0778@1|root,COG0778@2|Bacteria,2NRS1@2323|unclassified Bacteria 2|Bacteria C Nitroreductase family ydjA - - - - - - - - - - - Nitroreductase YYD2_k127_2193659_7 661478.OP10G_1144 7.932e-66 235.0 COG3358@1|root,COG3358@2|Bacteria 2|Bacteria S Protein of unknown function (DUF1684) - - - ko:K09164 - - - - ko00000 - - - DUF1684 YYD2_k127_2193659_12 357808.RoseRS_3392 3.867e-30 133.0 COG1413@1|root,COG1413@2|Bacteria,2G6UU@200795|Chloroflexi 200795|Chloroflexi C PBS lyase HEAT domain protein repeat-containing protein - - - - - - - - - - - - HEAT_2,HEAT_PBS YYD2_k127_2193659_2 926569.ANT_14260 8.34e-143 458.0 COG1071@1|root,COG1071@2|Bacteria,2G5SF@200795|Chloroflexi 200795|Chloroflexi C The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) pdhA - 1.2.4.1 ko:K00161 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00307 R00014,R00209,R01699,R03270 RC00004,RC00027,RC00627,RC02742,RC02744,RC02882 br01601,ko00000,ko00001,ko00002,ko01000 - - - E1_dh YYD2_k127_2193659_1 926569.ANT_14270 1.678e-173 547.0 COG0022@1|root,COG0022@2|Bacteria,2G60F@200795|Chloroflexi 200795|Chloroflexi C PFAM Transketolase central region - - 1.2.4.1,1.2.4.4 ko:K00162,ko:K11381,ko:K21417 ko00010,ko00020,ko00280,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00280,map00620,map00640,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00036,M00307 R00014,R00209,R01699,R03270,R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997 RC00004,RC00027,RC00627,RC02742,RC02743,RC02744,RC02882,RC02883,RC02949,RC02953 br01601,ko00000,ko00001,ko00002,ko01000 - - - Transket_pyr,Transketolase_C YYD2_k127_2193659_4 926569.ANT_14280 5.292e-132 433.0 COG0508@1|root,COG0508@2|Bacteria,2G619@200795|Chloroflexi 200795|Chloroflexi C Catalytic domain of components of various dehydrogenase complexes - - 2.3.1.12 ko:K00627 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200 M00307 R00209,R02569 RC00004,RC02742,RC02857 br01601,ko00000,ko00001,ko00002,ko01000 - - - 2-oxoacid_dh,Biotin_lipoyl,E3_binding YYD2_k127_2239577_0 926569.ANT_19800 1.905e-127 421.0 COG0210@1|root,COG0210@2|Bacteria,2G7VU@200795|Chloroflexi 200795|Chloroflexi F DNA helicase - - - - - - - - - - - - - YYD2_k127_2239577_1 926550.CLDAP_13410 4.99e-45 172.0 COG0412@1|root,COG0412@2|Bacteria,2G6NY@200795|Chloroflexi 200795|Chloroflexi Q Dienelactone hydrolase family - - 3.1.1.45 ko:K01061 ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130 - R03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222 RC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686 ko00000,ko00001,ko01000 - - - DLH YYD2_k127_2248328_0 1536775.H70737_19815 1.456e-155 501.0 COG1472@1|root,COG1472@2|Bacteria,1TP0T@1239|Firmicutes,4HAAG@91061|Bacilli,26QA6@186822|Paenibacillaceae 91061|Bacilli G Belongs to the glycosyl hydrolase 3 family - - 3.2.1.21,3.2.1.52 ko:K01207,ko:K05349 ko00460,ko00500,ko00520,ko00531,ko00940,ko01100,ko01110,ko01501,map00460,map00500,map00520,map00531,map00940,map01100,map01110,map01501 M00628 R00022,R00026,R02558,R02887,R02985,R03527,R04949,R04998,R05963,R07809,R07810,R10035,R10039,R10040,R10831 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko00002,ko01000 - GH3 - Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C YYD2_k127_2248328_1 479434.Sthe_2302 1.891e-46 185.0 COG1316@1|root,COG1316@2|Bacteria,2G6PZ@200795|Chloroflexi,27XRZ@189775|Thermomicrobia 189775|Thermomicrobia K cell envelope-related transcriptional attenuator - - - - - - - - - - - - LytR_C,LytR_cpsA_psr YYD2_k127_2272301_3 1382304.JNIL01000001_gene887 2.091e-13 73.0 COG0319@1|root,COG0319@2|Bacteria,1V6BU@1239|Firmicutes,4HIIE@91061|Bacilli,279W9@186823|Alicyclobacillaceae 91061|Bacilli S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA ybeY - - ko:K07042 - - - - ko00000,ko03009 - - - UPF0054 YYD2_k127_2272301_0 926569.ANT_14340 2.662e-196 634.0 COG1480@1|root,COG1480@2|Bacteria,2G5WC@200795|Chloroflexi 200795|Chloroflexi S metal-dependent phosphohydrolase, HD sub domain - - - ko:K07037 - - - - ko00000 - - - 7TM-7TMR_HD,7TMR-HDED,HD YYD2_k127_2272301_1 926569.ANT_14350 5.792e-38 149.0 COG1610@1|root,COG1610@2|Bacteria,2G7B8@200795|Chloroflexi 200795|Chloroflexi S Yqey-like protein - - - ko:K09117 - - - - ko00000 - - - YqeY YYD2_k127_2272301_2 2423.NA23_0201945 4.983e-24 107.0 2ERRQ@1|root,33JAW@2|Bacteria,2GEA1@200918|Thermotogae 200918|Thermotogae - - - - - - - - - - - - - - - YYD2_k127_2274221_1 192952.MM_1338 2.276e-115 406.0 arCOG07611@1|root,arCOG07611@2157|Archaea,2Y4YS@28890|Euryarchaeota 28890|Euryarchaeota CM Domain of unknown function DUF11 - - - - - - - - - - - - Beta_helix,DUF11 YYD2_k127_2274221_3 1423815.BACR01000044_gene2178 4.675e-29 124.0 COG0745@1|root,COG0745@2|Bacteria,1TP9M@1239|Firmicutes,4HB3T@91061|Bacilli,3F3Y0@33958|Lactobacillaceae 91061|Bacilli K response regulator vanR - - - - - - - - - - - Response_reg,Trans_reg_C YYD2_k127_2274221_0 926569.ANT_14870 0.0 1296.0 COG0112@1|root,COG0404@1|root,COG0112@2|Bacteria,COG0404@2|Bacteria,2G624@200795|Chloroflexi 200795|Chloroflexi H Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism glyA - 2.1.2.1 ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 M00140,M00141,M00346,M00532 R00945,R09099 RC00022,RC00112,RC01583,RC02958 ko00000,ko00001,ko00002,ko01000 - - - SHMT YYD2_k127_2274221_2 1121935.AQXX01000052_gene2960 1.649e-51 210.0 COG0739@1|root,COG0739@2|Bacteria,1R6RZ@1224|Proteobacteria,1RP73@1236|Gammaproteobacteria,1XNPW@135619|Oceanospirillales 135619|Oceanospirillales M Peptidase family M23 - - - ko:K08642 ko02024,map02024 - - - ko00000,ko00001,ko01000,ko01002 - - - PPC,Peptidase_M23 YYD2_k127_2274221_5 1463861.JNXE01000013_gene9161 4.645e-09 70.0 COG3408@1|root,COG3408@2|Bacteria,2IA19@201174|Actinobacteria 201174|Actinobacteria G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - - - - - - - - - - Bac_rhamnosid6H YYD2_k127_2274221_4 313612.L8106_00300 1.359e-25 125.0 COG2931@1|root,COG2931@2|Bacteria,1G1JS@1117|Cyanobacteria,1H9YK@1150|Oscillatoriales 1117|Cyanobacteria C Animal haem peroxidase - - 1.11.1.7 ko:K19511 - - - - ko00000,ko01000 - - - An_peroxidase,HemolysinCabind YYD2_k127_2281261_9 926569.ANT_30480 2.129e-49 184.0 COG2968@1|root,COG2968@2|Bacteria,2G6UC@200795|Chloroflexi 200795|Chloroflexi S Protein of unknown function (DUF541) - - - ko:K09807 - - - - ko00000 - - - SIMPL YYD2_k127_2281261_3 926569.ANT_02930 1.108e-112 370.0 COG1284@1|root,COG1284@2|Bacteria,2G6SY@200795|Chloroflexi 200795|Chloroflexi S Uncharacterized protein conserved in bacteria (DUF2179) - - - - - - - - - - - - DUF2179,YitT_membrane YYD2_k127_2281261_2 1157490.EL26_06940 6.448e-122 406.0 COG0312@1|root,COG0312@2|Bacteria,1TSQC@1239|Firmicutes,4HA0D@91061|Bacilli 91061|Bacilli S Zn-dependent proteases and their inactivated homologs - - - ko:K03568 - - - - ko00000,ko01002 - - - PmbA_TldD YYD2_k127_2281261_11 880072.Desac_0263 5.188e-39 163.0 COG0312@1|root,COG0312@2|Bacteria 2|Bacteria S metallopeptidase activity - - - ko:K03592 - - - - ko00000,ko01002 - - - PmbA_TldD YYD2_k127_2281261_12 926569.ANT_01470 1.72e-20 99.0 COG3714@1|root,COG3714@2|Bacteria 2|Bacteria S YhhN family yhhN GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - - - - - - - - - - YhhN YYD2_k127_2281261_4 717605.Theco_2365 4.648e-79 277.0 COG1159@1|root,COG1159@2|Bacteria,1TP3R@1239|Firmicutes,4H9WF@91061|Bacilli,26SJF@186822|Paenibacillaceae 91061|Bacilli S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism era GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113 - ko:K03595 - - - - ko00000,ko03009,ko03029 - - - KH_2,MMR_HSR1 YYD2_k127_2281261_5 926569.ANT_28890 5.018e-77 267.0 COG0697@1|root,COG0697@2|Bacteria,2G6ZR@200795|Chloroflexi 200795|Chloroflexi EG EamA-like transporter family - - - - - - - - - - - - EamA YYD2_k127_2281261_10 926569.ANT_30190 5.159e-45 166.0 COG5319@1|root,COG5319@2|Bacteria,2GA9G@200795|Chloroflexi 200795|Chloroflexi S Putative regulatory protein - - - - - - - - - - - - Zn-ribbon_8 YYD2_k127_2281261_6 926569.ANT_30180 1.696e-72 251.0 COG0194@1|root,COG0194@2|Bacteria,2G6EW@200795|Chloroflexi 200795|Chloroflexi F Essential for recycling GMP and indirectly, cGMP gmk - 2.7.4.8 ko:K00942 ko00230,ko01100,map00230,map01100 M00050 R00332,R02090 RC00002 ko00000,ko00001,ko00002,ko01000 - - - Guanylate_kin YYD2_k127_2281261_7 926569.ANT_30170 4.871e-64 229.0 COG0705@1|root,COG0705@2|Bacteria,2G7BZ@200795|Chloroflexi 200795|Chloroflexi S PFAM Rhomboid family protein - - 3.4.21.105 ko:K19225 - - - - ko00000,ko01000,ko01002 - - - Rhomboid YYD2_k127_2281261_0 311402.Avi_5351 1.332e-129 420.0 COG1173@1|root,COG1173@2|Bacteria,1MUG0@1224|Proteobacteria,2VETJ@28211|Alphaproteobacteria,4B73C@82115|Rhizobiaceae 28211|Alphaproteobacteria EP ABC-type dipeptide oligopeptide nickel transport systems, permease components dppC GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - ko:K02034,ko:K12370 ko02010,ko02024,map02010,map02024 M00239,M00324 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - BPD_transp_1,OppC_N YYD2_k127_2281261_1 311402.Avi_5350 1.93e-128 420.0 COG0601@1|root,COG0601@2|Bacteria,1MU8Z@1224|Proteobacteria,2TQKK@28211|Alphaproteobacteria,4BBR1@82115|Rhizobiaceae 28211|Alphaproteobacteria EP ABC-type dipeptide oligopeptide nickel transport systems, permease components dppB GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - ko:K02033,ko:K12369 ko02010,ko02024,map02010,map02024 M00239,M00324 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - BPD_transp_1 YYD2_k127_2281261_13 765420.OSCT_0207 1.857e-19 90.0 COG0747@1|root,COG0747@2|Bacteria,2G85H@200795|Chloroflexi,3773I@32061|Chloroflexia 32061|Chloroflexia E Bacterial extracellular solute-binding proteins, family 5 Middle - - - ko:K02035 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - SBP_bac_5 YYD2_k127_2281261_8 639283.Snov_4007 2.645e-52 190.0 COG0574@1|root,COG1080@1|root,COG0574@2|Bacteria,COG1080@2|Bacteria,1MU0R@1224|Proteobacteria,2TR3C@28211|Alphaproteobacteria,3EY8V@335928|Xanthobacteraceae 28211|Alphaproteobacteria G Pyruvate phosphate dikinase, PEP/pyruvate binding domain ppdK - 2.7.9.1 ko:K01006 ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200 M00169,M00171,M00172,M00173 R00206 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000 - - - PEP-utilizers,PEP-utilizers_C,PPDK_N YYD2_k127_2282580_7 926569.ANT_13840 5.81e-27 117.0 COG0454@1|root,COG0456@2|Bacteria,2G7CX@200795|Chloroflexi 200795|Chloroflexi K PFAM GCN5-related N-acetyltransferase - - - - - - - - - - - - Acetyltransf_1 YYD2_k127_2282580_6 926569.ANT_03770 2.762e-38 152.0 COG1719@1|root,COG1719@2|Bacteria,2G8D0@200795|Chloroflexi 200795|Chloroflexi S 4-vinyl reductase, 4VR - - - - - - - - - - - - V4R YYD2_k127_2282580_5 1382356.JQMP01000003_gene1647 4.274e-39 155.0 COG1651@1|root,COG1651@2|Bacteria,2G8TG@200795|Chloroflexi,27YB4@189775|Thermomicrobia 189775|Thermomicrobia O DSBA-like thioredoxin domain - - - - - - - - - - - - Thioredoxin_4 YYD2_k127_2282580_2 926569.ANT_11270 1.197e-89 301.0 COG1811@1|root,COG1811@2|Bacteria,2G6S2@200795|Chloroflexi 200795|Chloroflexi S Protein of unknown function (DUF554) - - - ko:K07150 - - - - ko00000 - - - DUF554 YYD2_k127_2282580_4 926569.ANT_11280 2.782e-58 209.0 COG2096@1|root,COG2096@2|Bacteria,2G6TB@200795|Chloroflexi 200795|Chloroflexi S PFAM Cobalamin adenosyltransferase - - 2.5.1.17 ko:K00798 ko00860,ko01100,map00860,map01100 M00122 R01492,R05220,R07268 RC00533 ko00000,ko00001,ko00002,ko01000 - - - Cob_adeno_trans YYD2_k127_2282580_12 69293.ENSGACP00000008298 5.681e-07 59.0 KOG4475@1|root,KOG4475@2759|Eukaryota,39TF4@33154|Opisthokonta,3BEDR@33208|Metazoa,3D3US@33213|Bilateria,489BI@7711|Chordata,494KD@7742|Vertebrata,49QI4@7898|Actinopterygii 33208|Metazoa P Von Willebrand factor A domain containing 7 VWA7 - - - - - - - - - - - VWA_2 YYD2_k127_2282580_1 944479.JQLX01000014_gene1636 6.201e-134 431.0 COG0863@1|root,COG0863@2|Bacteria,1RD30@1224|Proteobacteria,42NX1@68525|delta/epsilon subdivisions,2WU8X@28221|Deltaproteobacteria,2M7D5@213113|Desulfurellales 28221|Deltaproteobacteria L DNA methylase - - 2.1.1.113,2.1.1.72 ko:K00571,ko:K00590 - - - - ko00000,ko01000,ko02048 - - - N6_N4_Mtase YYD2_k127_2282580_3 610130.Closa_0385 1.922e-81 279.0 COG0778@1|root,COG0778@2|Bacteria,1UB8S@1239|Firmicutes,249SD@186801|Clostridia,21ZX5@1506553|Lachnoclostridium 186801|Clostridia C Nitroreductase family - - 1.5.1.38 ko:K19285 ko00740,ko01100,map00740,map01100 - R05706 RC00126 ko00000,ko00001,ko01000 - - - Nitroreductase YYD2_k127_2282580_9 1056820.KB900629_gene1601 3.405e-25 108.0 COG0023@1|root,COG0023@2|Bacteria,1MZ8T@1224|Proteobacteria,1S929@1236|Gammaproteobacteria,2PNUS@256005|Alteromonadales genera incertae sedis 1236|Gammaproteobacteria J Translation initiation factor SUI1 yciH GO:0001731,GO:0002181,GO:0002183,GO:0002188,GO:0002190,GO:0002192,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0110017,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K03113 ko03013,map03013 - - - ko00000,ko00001,ko03012 - - - SUI1 YYD2_k127_2282580_8 1034943.BN1094_01655 3.362e-25 112.0 2ERG8@1|root,33J1S@2|Bacteria,1NMXE@1224|Proteobacteria,1SVEJ@1236|Gammaproteobacteria 1236|Gammaproteobacteria S SnoaL-like domain - - - - - - - - - - - - SnoaL_4 YYD2_k127_2282580_11 1033743.CAES01000066_gene4211 6.54e-17 86.0 2FC4Z@1|root,3448W@2|Bacteria,1U2X0@1239|Firmicutes,4ICJY@91061|Bacilli,272JJ@186822|Paenibacillaceae 91061|Bacilli - - - - - - - - - - - - - - - YYD2_k127_2282580_10 316274.Haur_3935 9.359e-25 110.0 COG2318@1|root,COG2318@2|Bacteria,2G7AU@200795|Chloroflexi 200795|Chloroflexi S PFAM DinB family protein - - - - - - - - - - - - DinB YYD2_k127_2282580_0 926569.ANT_11960 0.0 1045.0 COG0646@1|root,COG1410@1|root,COG0646@2|Bacteria,COG1410@2|Bacteria,2G5Y6@200795|Chloroflexi 200795|Chloroflexi H Methionine synthase B12-binding module cap domain protein - - 2.1.1.13,2.1.1.258 ko:K00548,ko:K15023 ko00270,ko00450,ko00670,ko00720,ko01100,ko01110,ko01120,ko01200,ko01230,map00270,map00450,map00670,map00720,map01100,map01110,map01120,map01200,map01230 M00017,M00377 R00946,R02289,R09365,R10243 RC00004,RC00035,RC00113,RC01144,RC01241,RC02871,RC02977 ko00000,ko00001,ko00002,ko01000 - - - B12-binding,B12-binding_2,Met_synt_B12,Pterin_bind,S-methyl_trans YYD2_k127_229039_2 926569.ANT_10910 7.161e-14 76.0 COG3221@1|root,COG3221@2|Bacteria 2|Bacteria P organic phosphonate transport phnD - - ko:K02044 ko02010,map02010 M00223 - - ko00000,ko00001,ko00002,ko02000 3.A.1.9 - - Phosphonate-bd YYD2_k127_229039_1 926569.ANT_10910 1.809e-48 186.0 COG3221@1|root,COG3221@2|Bacteria 2|Bacteria P organic phosphonate transport phnD - - ko:K02044 ko02010,map02010 M00223 - - ko00000,ko00001,ko00002,ko02000 3.A.1.9 - - Phosphonate-bd YYD2_k127_229039_0 1307761.L21SP2_1483 2.237e-101 335.0 COG3638@1|root,COG3638@2|Bacteria,2J6UW@203691|Spirochaetes 203691|Spirochaetes P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system phnC - 3.6.3.28 ko:K02041 ko02010,map02010 M00223 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.9 - - ABC_tran YYD2_k127_2306540_4 706587.Desti_2991 3.812e-40 156.0 COG0030@1|root,COG0030@2|Bacteria 2|Bacteria J rRNA (adenine-N6,N6-)-dimethyltransferase activity ksgA GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182,2.1.1.184 ko:K00561,ko:K02528 - - R10716 RC00003,RC03257 br01600,ko00000,ko01000,ko01504,ko03009 - - - Methyltransf_11,RrnaAD YYD2_k127_2306540_1 1210908.HSB1_06020 6.899e-86 296.0 COG0438@1|root,arCOG01411@2157|Archaea,2XUFU@28890|Euryarchaeota,23U4A@183963|Halobacteria 183963|Halobacteria M Glycosyl transferases group 1 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 YYD2_k127_2306540_2 706587.Desti_0743 4.115e-46 170.0 COG0720@1|root,COG0720@2|Bacteria 2|Bacteria H synthase queD - 4.1.2.50,4.2.3.12 ko:K01737 ko00790,ko01100,map00790,map01100 M00842,M00843 R04286,R09959 RC01117,RC02846,RC02847 ko00000,ko00001,ko00002,ko01000,ko03016 - - - PTPS YYD2_k127_2306540_3 1454004.AW11_00526 1.715e-44 169.0 COG2045@1|root,COG2045@2|Bacteria,1N3KG@1224|Proteobacteria,2VR4U@28216|Betaproteobacteria 28216|Betaproteobacteria H 2-phosphosulpholactate phosphatase comB - 3.1.3.71 ko:K05979 ko00680,ko01120,map00680,map01120 M00358 R05789 RC00428 ko00000,ko00001,ko00002,ko01000 - - - 2-ph_phosp YYD2_k127_2306540_0 706587.Desti_2994 6.787e-110 364.0 COG1063@1|root,COG1063@2|Bacteria,1MW7C@1224|Proteobacteria,430WX@68525|delta/epsilon subdivisions,2WW1H@28221|Deltaproteobacteria 28221|Deltaproteobacteria E COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - - - - - - - - - - - - ADH_zinc_N YYD2_k127_2310573_1 311424.DhcVS_1445 2.451e-12 70.0 2A40N@1|root,30SJ6@2|Bacteria,2G9WM@200795|Chloroflexi,34DKR@301297|Dehalococcoidia 301297|Dehalococcoidia - - - - - - - - - - - - - - - YYD2_k127_2310573_0 926569.ANT_00880 3.336e-201 645.0 COG0488@1|root,COG0488@2|Bacteria,2G5VD@200795|Chloroflexi 200795|Chloroflexi S PFAM ABC transporter related - - - ko:K06158 - - - - ko00000,ko03012 - - - ABC_tran,ABC_tran_CTD,ABC_tran_Xtn YYD2_k127_2328464_1 1382306.JNIM01000001_gene1045 1.971e-45 176.0 COG2197@1|root,COG2197@2|Bacteria,2G6PA@200795|Chloroflexi 200795|Chloroflexi K Response regulator receiver - - - - - - - - - - - - GerE,Response_reg YYD2_k127_2328464_2 1382306.JNIM01000001_gene1046 4.713e-40 166.0 COG4585@1|root,COG4585@2|Bacteria,2G6F0@200795|Chloroflexi 200795|Chloroflexi T histidine kinase, dimerisation and phosphoacceptor region - - - - - - - - - - - - HAMP,HATPase_c,HisKA_3,sCache_3_2 YYD2_k127_2328464_3 765912.Thimo_2812 8.036e-13 79.0 COG3303@1|root,COG3303@2|Bacteria,1QXZC@1224|Proteobacteria,1T59J@1236|Gammaproteobacteria,1WXKQ@135613|Chromatiales 135613|Chromatiales P PFAM Doubled CXXCH motif - - - - - - - - - - - - Paired_CXXCH_1 YYD2_k127_2328464_0 224325.AF_0175 3.352e-52 195.0 COG0437@1|root,arCOG01500@2157|Archaea,2XU83@28890|Euryarchaeota,246KB@183980|Archaeoglobi 183980|Archaeoglobi C 4Fe-4S dicluster domain - - - ko:K00184 - - - - ko00000 5.A.3 - - Fer4_11,Fer4_4 YYD2_k127_2360779_6 926569.ANT_00870 2.048e-99 338.0 COG0457@1|root,COG0457@2|Bacteria,2G94P@200795|Chloroflexi 200795|Chloroflexi S Tetratricopeptide repeat - - - - - - - - - - - - TPR_16,TPR_2 YYD2_k127_2360779_4 926569.ANT_28060 8.258e-104 347.0 COG0336@1|root,COG0336@2|Bacteria,2G5MY@200795|Chloroflexi 200795|Chloroflexi J Belongs to the RNA methyltransferase TrmD family trmD GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 ko:K00554 - - R00597 RC00003,RC00334 ko00000,ko01000,ko03016 - - - tRNA_m1G_MT YYD2_k127_2360779_1 926569.ANT_28050 4.204e-170 543.0 COG2211@1|root,COG2211@2|Bacteria 2|Bacteria G Major facilitator Superfamily - - - - - - - - - - - - MFS_1 YYD2_k127_2360779_7 1254432.SCE1572_44715 1.359e-84 292.0 COG1744@1|root,COG1744@2|Bacteria,1R7WA@1224|Proteobacteria,434SK@68525|delta/epsilon subdivisions,2WZ3N@28221|Deltaproteobacteria,2Z19A@29|Myxococcales 28221|Deltaproteobacteria S ABC transporter substrate-binding protein PnrA-like med - - ko:K07335 - - - - ko00000 - - - Bmp YYD2_k127_2360779_5 926569.ANT_28040 1.577e-100 340.0 COG1744@1|root,COG1744@2|Bacteria,2G6UB@200795|Chloroflexi 200795|Chloroflexi M PFAM basic membrane lipoprotein - - - ko:K07335 - - - - ko00000 - - - Bmp YYD2_k127_2360779_0 926569.ANT_27890 5.297e-217 687.0 COG3845@1|root,COG3845@2|Bacteria,2G625@200795|Chloroflexi 200795|Chloroflexi S PFAM ABC transporter related - - 3.6.3.17 ko:K02056 - M00221 - - ko00000,ko00002,ko01000,ko02000 3.A.1.2 - - ABC_tran YYD2_k127_2360779_2 926569.ANT_27900 1.716e-130 428.0 COG4603@1|root,COG4603@2|Bacteria,2G6MU@200795|Chloroflexi 200795|Chloroflexi S Belongs to the binding-protein-dependent transport system permease family - - - ko:K02057 - M00221 - - ko00000,ko00002,ko02000 3.A.1.2 - - BPD_transp_2 YYD2_k127_2360779_3 1469613.JT55_05230 2.961e-110 370.0 COG1079@1|root,COG1079@2|Bacteria,1MVDQ@1224|Proteobacteria,2TSTD@28211|Alphaproteobacteria 28211|Alphaproteobacteria S Belongs to the binding-protein-dependent transport system permease family - - - ko:K02057 - M00221 - - ko00000,ko00002,ko02000 3.A.1.2 - - BPD_transp_2 YYD2_k127_2360779_8 926569.ANT_22190 1.043e-32 141.0 COG1572@1|root,COG1572@2|Bacteria,2G9M8@200795|Chloroflexi 2|Bacteria S Ig-like domain from next to BRCA1 gene - - - - - - - - - - - - DUF11,N_BRCA1_IG YYD2_k127_2360779_9 926569.ANT_15080 1.047e-22 109.0 COG1572@1|root,COG1572@2|Bacteria,2G9M8@200795|Chloroflexi 2|Bacteria S Ig-like domain from next to BRCA1 gene - - - - - - - - - - - - DUF11,N_BRCA1_IG YYD2_k127_2420637_1 118168.MC7420_7338 1.331e-59 217.0 2DTTJ@1|root,32UVW@2|Bacteria,1G8TS@1117|Cyanobacteria,1HCTF@1150|Oscillatoriales 1117|Cyanobacteria S Sulfotransferase family - - - - - - - - - - - - Sulfotransfer_3 YYD2_k127_2420637_0 926569.ANT_06580 1.036e-118 386.0 COG1216@1|root,COG1216@2|Bacteria 2|Bacteria V Glycosyl transferase, family 2 - GO:0003674,GO:0003824,GO:0016740,GO:0016757 - ko:K00786 - - - - ko00000,ko01000 - - - Glycos_transf_2 YYD2_k127_2420637_4 1305732.JAGG01000001_gene1211 2.246e-07 61.0 COG3944@1|root,COG3944@2|Bacteria,2I57K@201174|Actinobacteria 201174|Actinobacteria M Chain length determinant protein - - - - - - - - - - - - Wzz YYD2_k127_2420637_2 926569.ANT_29210 2.251e-24 118.0 COG3307@1|root,COG3307@2|Bacteria 2|Bacteria M -O-antigen - - - - - - - - - - - - Wzy_C YYD2_k127_2420637_3 65393.PCC7424_5869 3.298e-17 91.0 2CGDF@1|root,34388@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - YYD2_k127_2421504_5 926569.ANT_25240 5.072e-39 156.0 COG1388@1|root,COG1388@2|Bacteria,2G9RQ@200795|Chloroflexi 200795|Chloroflexi M Lysin motif - - - - - - - - - - - - LysM YYD2_k127_2421504_1 926569.ANT_06790 3.511e-113 370.0 COG0457@1|root,COG0457@2|Bacteria,2G770@200795|Chloroflexi 200795|Chloroflexi S Domain of unknown function (DUF4388) - - - - - - - - - - - - DUF4388 YYD2_k127_2421504_2 926569.ANT_06780 5.03e-89 299.0 COG2229@1|root,COG2229@2|Bacteria,2G8FZ@200795|Chloroflexi 200795|Chloroflexi S TIGRFAM small GTP-binding protein - - - ko:K06945 - - - - ko00000 - - - ATP_bind_1 YYD2_k127_2421504_0 926569.ANT_06770 3.367e-114 374.0 COG2267@1|root,COG2267@2|Bacteria,2G761@200795|Chloroflexi 200795|Chloroflexi I PFAM alpha beta hydrolase fold - - - - - - - - - - - - Abhydrolase_1 YYD2_k127_2421504_4 926569.ANT_03770 4.492e-49 183.0 COG1719@1|root,COG1719@2|Bacteria,2G8D0@200795|Chloroflexi 200795|Chloroflexi S 4-vinyl reductase, 4VR - - - - - - - - - - - - V4R YYD2_k127_2421504_3 926569.ANT_06750 3.736e-57 202.0 COG1207@1|root,COG1207@2|Bacteria,2G7KV@200795|Chloroflexi 200795|Chloroflexi M Hexapeptide repeat of succinyl-transferase - - - - - - - - - - - - Hexapep YYD2_k127_2439172_3 1265505.ATUG01000001_gene3075 2.394e-76 260.0 COG0436@1|root,COG0436@2|Bacteria,1MW0Z@1224|Proteobacteria,42MKR@68525|delta/epsilon subdivisions,2WIS3@28221|Deltaproteobacteria 28221|Deltaproteobacteria E PFAM Aminotransferase class I and II - - 2.6.1.1 ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 - R00355,R00694,R00734,R00896,R02433,R02619,R05052 RC00006 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 YYD2_k127_2439172_5 420662.Mpe_A3151 2.717e-19 98.0 COG0739@1|root,COG0739@2|Bacteria,1MVTF@1224|Proteobacteria,2VHBS@28216|Betaproteobacteria,1KIVP@119065|unclassified Burkholderiales 28216|Betaproteobacteria M peptidase - - - - - - - - - - - - Peptidase_M23 YYD2_k127_2439172_1 926569.ANT_11210 6.922e-192 611.0 COG3404@1|root,COG3643@1|root,COG3404@2|Bacteria,COG3643@2|Bacteria,2G64T@200795|Chloroflexi 200795|Chloroflexi E Formiminotransferase domain, N-terminal subdomain - - 2.1.2.5,4.3.1.4 ko:K00603,ko:K13990 ko00340,ko00670,ko01100,map00340,map00670,map01100 - R02287,R02302,R03189 RC00165,RC00221,RC00223,RC00688,RC00870 ko00000,ko00001,ko01000,ko03036,ko04147 - - - FTCD,FTCD_C,FTCD_N YYD2_k127_2439172_0 290397.Adeh_0829 0.0 1076.0 COG4412@1|root,COG4412@2|Bacteria,1P5IH@1224|Proteobacteria 1224|Proteobacteria O Peptidase M6, immune inhibitor A ina - - ko:K09607 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M6 YYD2_k127_2439172_4 1298865.H978DRAFT_1026 1.916e-55 203.0 29Y43@1|root,30JX6@2|Bacteria,1P0K1@1224|Proteobacteria,1STP3@1236|Gammaproteobacteria 1236|Gammaproteobacteria - - - - - - - - - - - - - - Sulfotransfer_1 YYD2_k127_2439172_6 509635.N824_29445 1.633e-12 70.0 COG4892@1|root,COG4892@2|Bacteria,4NSAM@976|Bacteroidetes,1ITM0@117747|Sphingobacteriia 976|Bacteroidetes S Cytochrome b5-like Heme Steroid binding domain - - - - - - - - - - - - Cyt-b5 YYD2_k127_2439172_2 926569.ANT_02710 1.186e-76 271.0 COG1526@1|root,COG1526@2|Bacteria,2G74E@200795|Chloroflexi 200795|Chloroflexi C Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH fdhD - - ko:K02379 - - - - ko00000 - - - FdhD-NarQ YYD2_k127_2439364_0 926569.ANT_19080 1.518e-184 587.0 COG0593@1|root,COG0593@2|Bacteria,2G5W8@200795|Chloroflexi 200795|Chloroflexi L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids dnaA GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - ko:K02313 ko02020,ko04112,map02020,map04112 - - - ko00000,ko00001,ko03032,ko03036 - - - Bac_DnaA,Bac_DnaA_C,DnaA_N YYD2_k127_2439364_17 1279009.ADICEAN_00260 4.878e-37 154.0 COG1835@1|root,COG1835@2|Bacteria,4NPI2@976|Bacteroidetes,47JPN@768503|Cytophagia 976|Bacteroidetes I Acyltransferase family - - - - - - - - - - - - Acyl_transf_3 YYD2_k127_2439364_14 485918.Cpin_3697 1.468e-43 173.0 COG1835@1|root,COG1835@2|Bacteria,4NPI2@976|Bacteroidetes 976|Bacteroidetes I PFAM Acyltransferase - - - - - - - - - - - - Acyl_transf_3 YYD2_k127_2439364_6 926569.ANT_31030 1.579e-112 371.0 COG0052@1|root,COG0052@2|Bacteria,2G5J2@200795|Chloroflexi 200795|Chloroflexi J Belongs to the universal ribosomal protein uS2 family rpsB GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02967 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S2 YYD2_k127_2439364_10 926569.ANT_31020 7.691e-76 259.0 COG0264@1|root,COG0264@2|Bacteria,2G6MJ@200795|Chloroflexi 200795|Chloroflexi J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome tsf - - ko:K02357 - - - - ko00000,ko03012,ko03029 - - - EF_TS YYD2_k127_2439364_9 926569.ANT_31010 1.096e-102 339.0 COG0528@1|root,COG0528@2|Bacteria,2G5RG@200795|Chloroflexi 200795|Chloroflexi F Catalyzes the reversible phosphorylation of UMP to UDP pyrH GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 ko:K09903 ko00240,ko01100,map00240,map01100 - R00158 RC00002 ko00000,ko00001,ko01000 - - - AA_kinase YYD2_k127_2439364_11 926569.ANT_03510 1.049e-73 252.0 COG0233@1|root,COG0233@2|Bacteria,2G6FY@200795|Chloroflexi 200795|Chloroflexi J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another frr GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - ko:K02838 - - - - ko00000,ko03012 - - - RRF YYD2_k127_2439364_8 926569.ANT_03500 1.602e-104 344.0 COG0020@1|root,COG0020@2|Bacteria,2G65C@200795|Chloroflexi 200795|Chloroflexi H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids uppS - 2.5.1.31 ko:K00806 ko00900,ko01110,map00900,map01110 - R06447 RC00279,RC02839 ko00000,ko00001,ko01000,ko01006 - - - Prenyltransf YYD2_k127_2439364_12 926569.ANT_03490 3.476e-60 219.0 COG4589@1|root,COG4589@2|Bacteria,2G6QV@200795|Chloroflexi 200795|Chloroflexi M Belongs to the CDS family cdsA - 2.7.7.41 ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 M00093 R01799 RC00002 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_1 YYD2_k127_2439364_5 926569.ANT_02050 3.012e-136 440.0 COG1494@1|root,COG1494@2|Bacteria,2G5XR@200795|Chloroflexi 200795|Chloroflexi G TIGRFAM fructose-1,6-bisphosphatase, class II glpX - 3.1.3.11 ko:K02446 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200 M00003,M00165,M00167 R00762,R04780 RC00017 ko00000,ko00001,ko00002,ko01000 - - - FBPase_glpX YYD2_k127_2439364_7 479435.Kfla_2275 6.645e-110 365.0 2C1EG@1|root,2Z7MZ@2|Bacteria,2GK4W@201174|Actinobacteria,4DR0C@85009|Propionibacteriales 201174|Actinobacteria - - - - - - - - - - - - - - - YYD2_k127_2439364_23 1123058.KB894217_gene662 0.0003013 51.0 COG5403@1|root,COG5403@2|Bacteria,4NEX0@976|Bacteroidetes,1HYHW@117743|Flavobacteriia 976|Bacteroidetes S PFAM Bacterial protein of - - - - - - - - - - - - DUF937 YYD2_k127_2439364_19 926569.ANT_28110 2.285e-23 102.0 COG2331@1|root,COG2331@2|Bacteria,2G752@200795|Chloroflexi 200795|Chloroflexi S Regulatory protein, FmdB family - - - - - - - - - - - - Zn-ribbon_8 YYD2_k127_2439364_22 926569.ANT_01080 4.479e-13 70.0 COG3526@1|root,COG3526@2|Bacteria,2G7F3@200795|Chloroflexi 200795|Chloroflexi O Rdx family - - - ko:K07401 - - - - ko00000 - - - Rdx YYD2_k127_2439364_2 926569.ANT_01090 1.609e-167 530.0 COG0180@1|root,COG0180@2|Bacteria,2G6CG@200795|Chloroflexi 200795|Chloroflexi J Tryptophanyl-tRNA synthetase trpS - 6.1.1.2 ko:K01867 ko00970,map00970 M00359,M00360 R03664 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_1b YYD2_k127_2439364_13 926569.ANT_09390 3.588e-51 194.0 COG1490@1|root,COG1490@2|Bacteria,2G6P5@200795|Chloroflexi 200795|Chloroflexi J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality dtd GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - ko:K07560 - - - - ko00000,ko01000,ko03016 - - - Tyr_Deacylase YYD2_k127_2439364_15 926569.ANT_09400 6.367e-42 164.0 COG0167@1|root,COG0167@2|Bacteria 2|Bacteria F dihydroorotate dehydrogenase activity - - 1.3.1.14 ko:K17828 ko00240,ko01100,map00240,map01100 M00051 R01869 RC00051 ko00000,ko00001,ko00002,ko01000 - - - DHO_dh YYD2_k127_2439364_3 926569.ANT_25190 3.234e-147 479.0 COG0493@1|root,COG0493@2|Bacteria,2G6SR@200795|Chloroflexi 200795|Chloroflexi C PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - 1.18.1.2,1.19.1.1 ko:K00528 - - R10159 - ko00000,ko01000 - - - Pyr_redox_2 YYD2_k127_2439364_16 926569.ANT_25180 7.799e-38 153.0 2FF2N@1|root,3470Y@2|Bacteria,2G9SF@200795|Chloroflexi 200795|Chloroflexi - - - - - - - - - - - - - - - YYD2_k127_2439364_1 926569.ANT_25170 6.84e-178 566.0 COG0612@1|root,COG0612@2|Bacteria,2G5N3@200795|Chloroflexi 200795|Chloroflexi S Peptidase M16 domain protein - - - ko:K07263 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M16,Peptidase_M16_C YYD2_k127_2439364_4 926569.ANT_25160 3.171e-137 450.0 COG0612@1|root,COG0612@2|Bacteria,2G68H@200795|Chloroflexi 200795|Chloroflexi S Insulinase (Peptidase family M16) - - - ko:K07263 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M16,Peptidase_M16_C YYD2_k127_2439364_18 926550.CLDAP_35390 3.592e-34 136.0 COG0736@1|root,COG0736@2|Bacteria,2G73N@200795|Chloroflexi 200795|Chloroflexi I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein acpS - 2.7.8.7 ko:K00997 ko00770,map00770 - R01625 RC00002 ko00000,ko00001,ko01000 - - - ACPS YYD2_k127_2455814_2 1235798.C817_04876 1.545e-06 57.0 COG1388@1|root,COG3409@1|root,COG1388@2|Bacteria,COG3409@2|Bacteria,1TS29@1239|Firmicutes,247SQ@186801|Clostridia,27V73@189330|Dorea 186801|Clostridia M Putative peptidoglycan binding domain - - - - - - - - - - - - LysM,PG_binding_1,SpoIID YYD2_k127_2455814_0 926569.ANT_08950 3.001e-121 414.0 COG0642@1|root,COG2203@1|root,COG2203@2|Bacteria,COG2205@2|Bacteria,2GA77@200795|Chloroflexi 2|Bacteria T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - GAF,GAF_2,HATPase_c,HisKA YYD2_k127_2455814_1 926569.ANT_16250 4.081e-16 91.0 COG0457@1|root,COG0457@2|Bacteria 926569.ANT_16250|- S peptidyl-tyrosine sulfation - - - - - - - - - - - - - YYD2_k127_2474255_3 1454004.AW11_01670 2.822e-18 94.0 COG0604@1|root,COG2905@1|root,COG0604@2|Bacteria,COG2905@2|Bacteria,1MXIK@1224|Proteobacteria,2W1P8@28216|Betaproteobacteria 28216|Betaproteobacteria CT Domain in cystathionine beta-synthase and other proteins. - - 1.3.1.85 ko:K14446 ko00630,ko01120,ko01200,map00630,map01120,map01200 M00373 R09291 RC02481 ko00000,ko00001,ko00002,ko01000 - - - ADH_N,ADH_zinc_N,CBS YYD2_k127_2474255_0 1380390.JIAT01000010_gene3535 2.065e-273 863.0 COG0404@1|root,COG0665@1|root,COG0404@2|Bacteria,COG0665@2|Bacteria,2GNCW@201174|Actinobacteria,4CPSG@84995|Rubrobacteria 84995|Rubrobacteria E FAD dependent oxidoreductase central domain - - - - - - - - - - - - DAO,FAO_M,GCV_T,GCV_T_C YYD2_k127_2474255_1 1499967.BAYZ01000117_gene3322 1.103e-143 460.0 COG0191@1|root,COG0191@2|Bacteria,2NPSG@2323|unclassified Bacteria 2|Bacteria G Fructose-bisphosphate aldolase class-II fba2 - 4.1.2.13 ko:K01624 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00003,M00165,M00167,M00344,M00345 R01068,R01070,R01829,R02568 RC00438,RC00439,RC00603,RC00604 ko00000,ko00001,ko00002,ko01000 - - - F_bP_aldolase,PHP YYD2_k127_2474255_2 1499967.BAYZ01000117_gene3321 4.763e-143 461.0 COG0079@1|root,COG0079@2|Bacteria,2NNZK@2323|unclassified Bacteria 2|Bacteria E Aminotransferase class I and II hisD - 1.1.1.23,2.6.1.9 ko:K00013,ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 M00026 R00694,R00734,R01158,R01163,R03012,R03243 RC00006,RC00099,RC00242,RC00463,RC00888 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_1_2,Histidinol_dh YYD2_k127_2502865_4 383372.Rcas_1029 4.642e-29 119.0 COG1215@1|root,COG1215@2|Bacteria,2GBN6@200795|Chloroflexi 200795|Chloroflexi M Glycosyltransferase like family 2 - - - - - - - - - - - - Glycos_transf_2 YYD2_k127_2502865_1 926569.ANT_22630 2.35e-144 473.0 COG1086@1|root,COG2148@1|root,COG1086@2|Bacteria,COG2148@2|Bacteria,2G6DJ@200795|Chloroflexi 200795|Chloroflexi M Bacterial sugar transferase - - - - - - - - - - - - Bac_transf,CoA_binding_3 YYD2_k127_2502865_2 357808.RoseRS_2395 1.699e-85 293.0 COG0451@1|root,COG0451@2|Bacteria,2G6ET@200795|Chloroflexi,375HU@32061|Chloroflexia 32061|Chloroflexia M short-chain dehydrogenase reductase SDR - - 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 - - - Epimerase YYD2_k127_2502865_0 926569.ANT_22620 1.821e-246 776.0 COG1086@1|root,COG1086@2|Bacteria,2G5M8@200795|Chloroflexi 200795|Chloroflexi GM Short-chain dehydrogenase reductase SDR - - - - - - - - - - - - CoA_binding_3,Polysacc_synt_2 YYD2_k127_2502865_3 926569.ANT_22610 1.722e-72 250.0 COG2348@1|root,COG2348@2|Bacteria,2G6KK@200795|Chloroflexi 200795|Chloroflexi V PFAM Methicillin resistance protein - - - - - - - - - - - - FemAB YYD2_k127_2503444_2 926569.ANT_22760 3.517e-116 384.0 COG2223@1|root,COG2223@2|Bacteria 2|Bacteria P nitrite transmembrane transporter activity - - - ko:K02532 - - - - ko00000,ko02000 2.A.1.5 - - MFS_1 YYD2_k127_2503444_5 926569.ANT_30300 2.233e-52 188.0 2FH2K@1|root,348XD@2|Bacteria,2G93E@200795|Chloroflexi 200795|Chloroflexi - - - - - - - - - - - - - - - YYD2_k127_2503444_4 1122918.KB907252_gene2903 6.818e-59 210.0 COG4894@1|root,COG4894@2|Bacteria,1VUCV@1239|Firmicutes,4I6QC@91061|Bacilli,26U9X@186822|Paenibacillaceae 91061|Bacilli - - - - - - - - - - - - - - - YYD2_k127_2503444_3 926569.ANT_30130 4.681e-71 252.0 COG1376@1|root,COG1376@2|Bacteria 2|Bacteria D ErfK ybiS ycfS ynhG family protein - - - - - - - - - - - - DUF5011,YkuD YYD2_k127_2503444_0 555088.DealDRAFT_2538 5.161e-283 878.0 COG1960@1|root,COG1960@2|Bacteria,1V03D@1239|Firmicutes,24A8N@186801|Clostridia 186801|Clostridia C acyl-CoA dehydrogenase - - - - - - - - - - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M YYD2_k127_2503444_1 671143.DAMO_0652 4.27e-221 693.0 COG0183@1|root,COG0183@2|Bacteria,2NP9T@2323|unclassified Bacteria 2|Bacteria I Belongs to the thiolase family - - 2.3.1.9 ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 M00088,M00095,M00373,M00374,M00375 R00238,R01177 RC00004,RC00326 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Thiolase_C,Thiolase_N YYD2_k127_2503444_6 671143.DAMO_0654 7.661e-52 188.0 COG1545@1|root,COG1545@2|Bacteria 2|Bacteria I DUF35 OB-fold domain, acyl-CoA-associated - - - ko:K07068 - - - - ko00000 - - - DUF35_N,OB_aCoA_assoc YYD2_k127_2503444_8 1210884.HG799474_gene15133 2.179e-06 59.0 COG3209@1|root,COG3209@2|Bacteria 2|Bacteria M self proteolysis - - - - - - - - - - - - CHU_C,VCBS YYD2_k127_2503444_9 649747.HMPREF0083_05861 0.0002451 48.0 2BZE6@1|root,3329D@2|Bacteria,1VJEQ@1239|Firmicutes,4HP3U@91061|Bacilli,270CQ@186822|Paenibacillaceae 91061|Bacilli - - - - - - - - - - - - - - - YYD2_k127_2503444_7 215803.DB30_2086 5.184e-09 63.0 COG2365@1|root,COG2365@2|Bacteria,1QX58@1224|Proteobacteria,43BXZ@68525|delta/epsilon subdivisions,2X78T@28221|Deltaproteobacteria,2YWT7@29|Myxococcales 28221|Deltaproteobacteria T Dual specificity phosphatase, catalytic domain - - - - - - - - - - - - DSPc YYD2_k127_2504923_2 1121377.KB906408_gene1161 1.224e-87 300.0 COG2309@1|root,COG2309@2|Bacteria,1WI5P@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus E Leucyl aminopeptidase (Aminopeptidase T) - - - ko:K19689 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M29 YYD2_k127_2504923_4 926569.ANT_06160 1.097e-19 100.0 COG0392@1|root,COG0392@2|Bacteria 2|Bacteria M lysyltransferase activity mprF - - ko:K07027 - - - - ko00000,ko02000 4.D.2 - - LPG_synthase_TM YYD2_k127_2504923_5 1122622.ATWJ01000007_gene2035 6.753e-07 60.0 COG0500@1|root,COG2226@2|Bacteria,2GJSF@201174|Actinobacteria,4FGAF@85021|Intrasporangiaceae 201174|Actinobacteria Q Hypothetical methyltransferase - - - - - - - - - - - - Methyltransf_11 YYD2_k127_2504923_1 1502851.FG93_04278 3.978e-89 308.0 COG2327@1|root,COG2327@2|Bacteria 2|Bacteria S slime layer polysaccharide biosynthetic process csaB - 2.4.1.187 ko:K05946 ko05111,map05111 - - - ko00000,ko00001,ko01000,ko01003 - GT26 - PS_pyruv_trans YYD2_k127_2504923_3 1502851.FG93_04279 2.722e-81 286.0 COG0438@1|root,COG0438@2|Bacteria,1MVKK@1224|Proteobacteria,2U963@28211|Alphaproteobacteria 28211|Alphaproteobacteria M Glycosyl transferases group 1 - - - - - - - - - - - - Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1 YYD2_k127_2504923_6 1267535.KB906767_gene4869 0.0003166 44.0 COG0288@1|root,COG0288@2|Bacteria,3Y8PK@57723|Acidobacteria,2JNG2@204432|Acidobacteriia 204432|Acidobacteriia P Carbonic anhydrase - - 4.2.1.1 ko:K01673 ko00910,map00910 - R00132,R10092 RC02807 ko00000,ko00001,ko01000 - - - Pro_CA YYD2_k127_2508988_5 926569.ANT_15910 3.073e-63 220.0 COG0481@1|root,COG0481@2|Bacteria,2G5K2@200795|Chloroflexi 200795|Chloroflexi J Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner lepA - - ko:K03596 ko05134,map05134 - - - ko00000,ko00001 - - - EFG_C,EFG_II,GTP_EFTU,GTP_EFTU_D2,LepA_C YYD2_k127_2508988_8 926550.CLDAP_35470 2.304e-05 55.0 COG3103@1|root,COG3858@1|root,COG3858@2|Bacteria,COG4991@2|Bacteria 2|Bacteria T sh3 domain protein MA20_15015 - - - - - - - - - - - DUF1236,SH3_3 YYD2_k127_2508988_3 926569.ANT_15920 5.586e-90 304.0 COG1189@1|root,COG1189@2|Bacteria,2G6BX@200795|Chloroflexi 200795|Chloroflexi J Ribosomal RNA methyltransferase RrmJ FtsJ - - 2.1.1.226,2.1.1.227 ko:K06442 - - - - ko00000,ko01000,ko03009 - - - FtsJ,S4 YYD2_k127_2508988_2 926569.ANT_15930 1.494e-115 378.0 COG0382@1|root,COG0382@2|Bacteria,2G5WY@200795|Chloroflexi 200795|Chloroflexi H PFAM UbiA prenyltransferase - - - - - - - - - - - - UbiA YYD2_k127_2508988_4 926569.ANT_15940 6.6e-80 295.0 COG1577@1|root,COG1577@2|Bacteria,2G6DY@200795|Chloroflexi 200795|Chloroflexi I TIGRFAM mevalonate kinase mvk - 2.7.1.36 ko:K00869 ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146 M00095 R02245 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - GHMP_kinases_C,GHMP_kinases_N YYD2_k127_2508988_1 269797.Mbar_A1244 2.887e-163 526.0 COG0520@1|root,arCOG00065@2157|Archaea 2157|Archaea E COG0520 Selenocysteine lyase - - - - - - - - - - - - Aminotran_5 YYD2_k127_2508988_6 1122919.KB905589_gene4066 7.349e-26 109.0 COG4895@1|root,COG4895@2|Bacteria,1VEG3@1239|Firmicutes,4HNJA@91061|Bacilli,26ZRV@186822|Paenibacillaceae 91061|Bacilli S Uncharacterized conserved protein (DUF2196) ywbE - - - - - - - - - - - DUF2196 YYD2_k127_2508988_7 1297742.A176_00374 1.286e-05 54.0 28MP9@1|root,2ZAYN@2|Bacteria,1NR2W@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - YYD2_k127_2508988_0 357808.RoseRS_2964 6.371e-253 787.0 COG0446@1|root,COG1902@1|root,COG0446@2|Bacteria,COG1902@2|Bacteria,2G7MP@200795|Chloroflexi,3760K@32061|Chloroflexia 32061|Chloroflexia C PFAM NADH flavin oxidoreductase NADH oxidase - - 1.5.8.1,1.5.8.2 ko:K00317 ko00680,ko01120,ko01200,map00680,map01120,map01200 - R01588,R02511 RC00185,RC00556,RC00557,RC00732 ko00000,ko00001,ko01000 - - - Oxidored_FMN,Pyr_redox_2 YYD2_k127_2513939_1 234267.Acid_4640 7.845e-61 213.0 COG1682@1|root,COG1682@2|Bacteria,3Y7JV@57723|Acidobacteria 57723|Acidobacteria GM ABC-2 type transporter - - - ko:K09690 ko02010,map02010 M00250 - - ko00000,ko00001,ko00002,ko02000 3.A.1.103 - - ABC2_membrane YYD2_k127_2513939_0 926569.ANT_06310 4.451e-183 581.0 COG1134@1|root,COG1134@2|Bacteria 2|Bacteria GM teichoic acid transport - - 3.6.3.38 ko:K01990,ko:K09689,ko:K09691 ko02010,map02010 M00249,M00250,M00254 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.101,3.A.1.103 - - ABC_tran,Wzt_C YYD2_k127_2513939_2 926569.ANT_06320 4.237e-19 91.0 COG0763@1|root,COG0763@2|Bacteria 2|Bacteria M lipid-A-disaccharide synthase activity - - 2.4.1.182 ko:K00748 ko00540,ko01100,map00540,map01100 M00060 R04606 RC00005,RC00059 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT19 - Capsule_synth YYD2_k127_2567039_0 261292.Nit79A3_1514 1.028e-281 883.0 COG0383@1|root,COG0383@2|Bacteria,1R3Q8@1224|Proteobacteria 1224|Proteobacteria G Alpha-Mannosidase mngB GO:0003674,GO:0003824,GO:0004553,GO:0004559,GO:0005975,GO:0005996,GO:0006013,GO:0006464,GO:0006517,GO:0006807,GO:0008150,GO:0008152,GO:0009100,GO:0009987,GO:0015923,GO:0016787,GO:0016798,GO:0019318,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0071704,GO:1901135,GO:1901564 3.2.1.170,3.2.1.24 ko:K01191,ko:K15524 ko00511,map00511 - - - ko00000,ko00001,ko01000,ko04131 - GH38 iEcolC_1368.EcolC_2924,iSF_1195.SF0565,iSFxv_1172.SFxv_0623,iS_1188.S0578 Alpha-mann_mid,Glyco_hydro_38,Glyco_hydro_38C YYD2_k127_2567039_1 1455608.JDTH01000011_gene2312 7.396e-37 146.0 COG0596@1|root,arCOG01648@2157|Archaea,2XVTE@28890|Euryarchaeota,23TCW@183963|Halobacteria 183963|Halobacteria S hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - - - - - - - - - - Abhydrolase_1,Abhydrolase_6 YYD2_k127_2598254_2 706587.Desti_5495 1.529e-18 89.0 COG0633@1|root,COG3894@1|root,COG0633@2|Bacteria,COG3894@2|Bacteria,1MV6C@1224|Proteobacteria,42MF5@68525|delta/epsilon subdivisions,2WKC6@28221|Deltaproteobacteria,2MQU1@213462|Syntrophobacterales 28221|Deltaproteobacteria C PFAM 2Fe-2S iron-sulfur cluster binding domain - - - - - - - - - - - - DUF4445,Fer2 YYD2_k127_2598254_1 1499967.BAYZ01000005_gene5442 2.654e-81 276.0 COG0145@1|root,COG0145@2|Bacteria 2|Bacteria EQ ligase activity oplaH - 3.5.2.9 ko:K01469 ko00480,map00480 - R00251 RC00553 ko00000,ko00001,ko01000 - - iNJ661.Rv0266c DUF1638,Hydant_A_N,Hydantoinase_A,Hydantoinase_B YYD2_k127_2598254_0 1379698.RBG1_1C00001G0936 5.079e-84 286.0 COG1335@1|root,COG1335@2|Bacteria,2NRGH@2323|unclassified Bacteria 2|Bacteria Q Isochorismatase family - - 3.5.1.110 ko:K09020 ko00240,ko01100,map00240,map01100 - R09947,R09980 RC02737,RC02738 ko00000,ko00001,ko01000 - - - Isochorismatase YYD2_k127_2601711_0 926569.ANT_17860 1.291e-122 402.0 COG0068@1|root,COG0068@2|Bacteria,2G5QN@200795|Chloroflexi 200795|Chloroflexi O Belongs to the carbamoyltransferase HypF family hypF - - ko:K04656 - - - - ko00000 - - - Acylphosphatase,Sua5_yciO_yrdC,zf-HYPF YYD2_k127_2601711_1 926569.ANT_17850 2.578e-88 296.0 COG0378@1|root,COG0378@2|Bacteria,2G6EP@200795|Chloroflexi 200795|Chloroflexi KO Hydrogenase accessory protein HypB hypB - - ko:K03189,ko:K04652 - - - - ko00000,ko03110 - - - cobW YYD2_k127_2601711_2 926569.ANT_17840 1.8e-32 129.0 COG0375@1|root,COG0375@2|Bacteria,2G7H5@200795|Chloroflexi 200795|Chloroflexi C Probably plays a role in a hydrogenase nickel cofactor insertion step hypA - - ko:K04651 - - - - ko00000,ko03110 - - - HypA YYD2_k127_2623303_3 926550.CLDAP_07570 1.817e-05 50.0 COG0392@1|root,COG0392@2|Bacteria,2G96G@200795|Chloroflexi 200795|Chloroflexi S Lysylphosphatidylglycerol synthase TM region - - - ko:K07027 - - - - ko00000,ko02000 4.D.2 - - LPG_synthase_TM YYD2_k127_2623303_1 357808.RoseRS_0012 3.29e-43 169.0 COG0204@1|root,COG0204@2|Bacteria,2G92W@200795|Chloroflexi,3779N@32061|Chloroflexia 32061|Chloroflexia I PFAM phospholipid glycerol acyltransferase - - - - - - - - - - - - Acyltransferase YYD2_k127_2623303_2 357808.RoseRS_2245 4.582e-21 96.0 COG2127@1|root,COG2127@2|Bacteria,2G9F8@200795|Chloroflexi,375WT@32061|Chloroflexia 32061|Chloroflexia S Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation clpS - - ko:K06891 - - - - ko00000 - - - ClpS YYD2_k127_2623303_0 521045.Kole_1757 1.042e-46 174.0 COG0656@1|root,COG0656@2|Bacteria,2GCHS@200918|Thermotogae 200918|Thermotogae S aldo keto reductase - - - - - - - - - - - - Aldo_ket_red YYD2_k127_2626185_1 1128427.KB904821_gene4364 7.034e-06 51.0 COG0472@1|root,COG0472@2|Bacteria,1G057@1117|Cyanobacteria,1H9GY@1150|Oscillatoriales 1117|Cyanobacteria M PFAM Glycosyl transferase family 4 rfe - - ko:K13007 - - - - ko00000,ko01000,ko01003,ko01005 - - - Glycos_transf_4 YYD2_k127_2626185_0 56780.SYN_02684 8.704e-161 532.0 COG5360@1|root,COG5360@2|Bacteria,1MZ5X@1224|Proteobacteria,42PG1@68525|delta/epsilon subdivisions,2WP6V@28221|Deltaproteobacteria,2MRGQ@213462|Syntrophobacterales 28221|Deltaproteobacteria S Heparinase II/III N-terminus - - - - - - - - - - - - Hepar_II_III,Hepar_II_III_N YYD2_k127_2638253_1 357808.RoseRS_0231 1.196e-56 223.0 COG0745@1|root,COG4191@1|root,COG0745@2|Bacteria,COG4191@2|Bacteria,2G7Y4@200795|Chloroflexi,374VX@32061|Chloroflexia 32061|Chloroflexia T histidine kinase A domain protein - - - - - - - - - - - - HATPase_c,HisKA,PAS_8,Response_reg YYD2_k127_2638253_0 926569.ANT_11740 2.184e-134 446.0 COG2203@1|root,COG2204@1|root,COG4191@1|root,COG2203@2|Bacteria,COG2204@2|Bacteria,COG4191@2|Bacteria,2G6UY@200795|Chloroflexi 200795|Chloroflexi T SMART ATP-binding region ATPase domain protein - - - - - - - - - - - - HATPase_c,HisKA,PAS_9 YYD2_k127_2638253_2 926569.ANT_11750 7.978e-33 130.0 COG0745@1|root,COG0745@2|Bacteria,2G8W7@200795|Chloroflexi 200795|Chloroflexi K Two component transcriptional regulator, winged helix family - - - - - - - - - - - - Response_reg,Trans_reg_C YYD2_k127_2656168_1 316274.Haur_0219 3.03e-22 96.0 COG1132@1|root,COG1132@2|Bacteria,2G7J5@200795|Chloroflexi,3758C@32061|Chloroflexia 200795|Chloroflexi V PFAM ABC transporter transmembrane region - - - ko:K06147 - - - - ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 - - ABC_membrane,ABC_tran YYD2_k127_2656168_0 926550.CLDAP_11260 1.202e-210 670.0 COG1132@1|root,COG1132@2|Bacteria,2G7QN@200795|Chloroflexi 200795|Chloroflexi V PFAM ABC transporter transmembrane region - - - - - - - - - - - - ABC_membrane,ABC_tran YYD2_k127_2674383_0 926569.ANT_11930 4.169e-112 369.0 COG0452@1|root,COG0452@2|Bacteria,2G60D@200795|Chloroflexi 200795|Chloroflexi H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine coaBC - 4.1.1.36,6.3.2.5 ko:K13038 ko00770,ko01100,map00770,map01100 M00120 R03269,R04231 RC00064,RC00090,RC00822 ko00000,ko00001,ko00002,ko01000 - - - DFP,Flavoprotein YYD2_k127_2674383_2 1278073.MYSTI_00901 1.112e-97 330.0 COG2382@1|root,COG2382@2|Bacteria,1QX4D@1224|Proteobacteria 1224|Proteobacteria P Putative esterase - - - ko:K07214 - - - - ko00000 - - - Esterase YYD2_k127_2674383_4 671143.DAMO_0143 6.476e-51 192.0 COG1881@1|root,COG1881@2|Bacteria,2NPDK@2323|unclassified Bacteria 2|Bacteria S Phosphatidylethanolamine-binding protein - - - ko:K06910 - - - - ko00000 - - - PBP YYD2_k127_2674383_1 1333998.M2A_2171 3.845e-104 349.0 COG3268@1|root,COG3268@2|Bacteria,1MVI3@1224|Proteobacteria,2TV1G@28211|Alphaproteobacteria 28211|Alphaproteobacteria S Saccharopine dehydrogenase - - - - - - - - - - - - Sacchrp_dh_NADP YYD2_k127_2674383_3 926569.ANT_17890 4.274e-56 199.0 COG0309@1|root,COG0309@2|Bacteria,2G5MV@200795|Chloroflexi 200795|Chloroflexi O hydrogenase expression formation protein HypE hypE - - ko:K04655 - - - - ko00000 - - - AIRS,AIRS_C YYD2_k127_2688816_1 324602.Caur_1745 6.063e-136 440.0 COG0451@1|root,COG0451@2|Bacteria,2G6ET@200795|Chloroflexi,375HU@32061|Chloroflexia 32061|Chloroflexia M short-chain dehydrogenase reductase SDR - - 5.1.3.10 ko:K12454 ko00520,map00520 - R04266 RC00528 ko00000,ko00001,ko01000 - - - GDP_Man_Dehyd YYD2_k127_2688816_2 357808.RoseRS_3096 9.594e-63 223.0 COG0705@1|root,COG0705@2|Bacteria,2G6J5@200795|Chloroflexi,375V4@32061|Chloroflexia 32061|Chloroflexia S PFAM Rhomboid family protein - - - - - - - - - - - - Rhomboid YYD2_k127_2688816_3 926569.ANT_15900 1.411e-28 128.0 COG0392@1|root,COG0392@2|Bacteria 2|Bacteria M lysyltransferase activity mprF - - ko:K07027 - - - - ko00000,ko02000 4.D.2 - - LPG_synthase_TM YYD2_k127_2688816_0 926569.ANT_15910 1.701e-242 756.0 COG0481@1|root,COG0481@2|Bacteria,2G5K2@200795|Chloroflexi 200795|Chloroflexi J Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner lepA - - ko:K03596 ko05134,map05134 - - - ko00000,ko00001 - - - EFG_C,EFG_II,GTP_EFTU,GTP_EFTU_D2,LepA_C YYD2_k127_2691642_0 926569.ANT_00620 1.122e-114 384.0 COG0438@1|root,COG0438@2|Bacteria,2G9D7@200795|Chloroflexi 200795|Chloroflexi M PFAM glycosyl transferase group 1 - - - - - - - - - - - - Glyco_trans_1_2,Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4 YYD2_k127_2691642_1 926569.ANT_31610 3.692e-08 57.0 COG2244@1|root,COG2244@2|Bacteria 2|Bacteria S polysaccharide biosynthetic process wzx - - ko:K16694 - - - - ko00000,ko02000 2.A.66.2.6 - - Polysacc_synt_3 YYD2_k127_26944_4 891968.Anamo_0735 2.987e-25 108.0 COG4392@1|root,COG4392@2|Bacteria 2|Bacteria E branched-chain amino acid - - - - - - - - - - - - AzlD YYD2_k127_26944_2 592015.HMPREF1705_01010 1.397e-69 243.0 COG1296@1|root,COG1296@2|Bacteria,3TBT2@508458|Synergistetes 508458|Synergistetes E AzlC protein - - - - - - - - - - - - AzlC YYD2_k127_26944_3 926569.ANT_20450 3.934e-32 134.0 COG0204@1|root,COG0204@2|Bacteria 2|Bacteria I Acyl-transferase - - - - - - - - - - - - Acyltransferase YYD2_k127_26944_5 926569.ANT_04490 6.889e-17 81.0 COG1146@1|root,COG1146@2|Bacteria,2G7ES@200795|Chloroflexi 200795|Chloroflexi C PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - 1.2.7.3 ko:K00176 ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200 M00009,M00011,M00173,M00620 R01197 RC00004,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - Fer4 YYD2_k127_26944_0 926569.ANT_04500 2.865e-168 536.0 COG0674@1|root,COG0674@2|Bacteria,2G5UG@200795|Chloroflexi 200795|Chloroflexi C Pyruvate:ferredoxin oxidoreductase core domain II - - 1.2.7.11,1.2.7.3 ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - PFOR_II,POR_N YYD2_k127_26944_1 926569.ANT_04510 3.491e-120 389.0 COG1013@1|root,COG1013@2|Bacteria,2G5VG@200795|Chloroflexi 200795|Chloroflexi C Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - 1.2.7.11,1.2.7.3 ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C YYD2_k127_2699875_5 926569.ANT_00360 3.099e-22 102.0 2EA58@1|root,334A5@2|Bacteria,2G7FD@200795|Chloroflexi 200795|Chloroflexi - - - - - - - - - - - - - - - YYD2_k127_2699875_6 316274.Haur_0190 6.401e-14 86.0 COG4886@1|root,COG4886@2|Bacteria,2G906@200795|Chloroflexi,375M2@32061|Chloroflexia 32061|Chloroflexia S Leucine-rich repeat (LRR) protein - - - - - - - - - - - - - YYD2_k127_2699875_7 247490.KSU1_B0648 3.744e-08 67.0 28MYQ@1|root,2ZB5K@2|Bacteria,2IZUC@203682|Planctomycetes 203682|Planctomycetes - - - - - - - - - - - - - - - YYD2_k127_2699875_3 926569.ANT_00380 2.328e-44 169.0 2ANS9@1|root,31DS7@2|Bacteria,2G7CA@200795|Chloroflexi 200795|Chloroflexi - - - - - - - - - - - - - - - YYD2_k127_2699875_0 926569.ANT_00390 2.319e-134 452.0 COG1070@1|root,COG1070@2|Bacteria,2G6JV@200795|Chloroflexi 200795|Chloroflexi G Carbohydrate kinase - - - - - - - - - - - - MutL YYD2_k127_2699875_1 926569.ANT_00400 1.566e-86 297.0 28II6@1|root,2Z8JB@2|Bacteria,2G7FN@200795|Chloroflexi 200795|Chloroflexi - - - - - - - - - - - - - - - YYD2_k127_2699875_2 926569.ANT_00470 3.564e-58 203.0 COG0500@1|root,COG2226@2|Bacteria,2G780@200795|Chloroflexi 200795|Chloroflexi Q PFAM Methyltransferase type 11 - - - - - - - - - - - - Methyltransf_11 YYD2_k127_2717563_3 304371.MCP_0966 3.963e-61 220.0 COG0863@1|root,arCOG00115@2157|Archaea,2Y8E2@28890|Euryarchaeota 28890|Euryarchaeota L DNA methylase - - - - - - - - - - - - N6_N4_Mtase YYD2_k127_2717563_6 926569.ANT_28920 5.842e-35 143.0 28XMW@1|root,2ZJIW@2|Bacteria,2G9GS@200795|Chloroflexi 926569.ANT_28920|- - - - - - - - - - - - - - - - YYD2_k127_2717563_1 926550.CLDAP_24920 5.208e-127 415.0 COG0451@1|root,COG0451@2|Bacteria,2G8B1@200795|Chloroflexi 200795|Chloroflexi GM Polysaccharide biosynthesis protein - - - - - - - - - - - - Epimerase YYD2_k127_2717563_0 926569.ANT_28910 6.033e-171 546.0 COG0104@1|root,COG0104@2|Bacteria,2G602@200795|Chloroflexi 200795|Chloroflexi F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP purA - 6.3.4.4 ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 M00049 R01135 RC00458,RC00459 ko00000,ko00001,ko00002,ko01000 - - - Adenylsucc_synt YYD2_k127_2717563_4 926569.ANT_28020 7.122e-53 197.0 COG1388@1|root,COG1388@2|Bacteria 2|Bacteria M LysM domain - - - - - - - - - - - - LysM,Peptidase_M15_4 YYD2_k127_2717563_7 1283300.ATXB01000001_gene770 6.617e-34 137.0 COG0537@1|root,COG0537@2|Bacteria,1RDCJ@1224|Proteobacteria,1S3QE@1236|Gammaproteobacteria,1XFE1@135618|Methylococcales 135618|Methylococcales FG Scavenger mRNA decapping enzyme C-term binding - - - ko:K02503 - - - - ko00000,ko04147 - - - HIT YYD2_k127_2717563_2 926569.ANT_12120 1.115e-98 336.0 COG0726@1|root,COG0726@2|Bacteria 2|Bacteria G polysaccharide deacetylase - - 3.4.24.40 ko:K01406 ko01503,map01503 - - - ko00000,ko00001,ko01000,ko01002 - - - Cadherin,HemolysinCabind,Peptidase_M10_C,Polysacc_deac_1 YYD2_k127_2717563_5 926569.ANT_12130 7.026e-44 160.0 COG1260@1|root,COG1260@2|Bacteria,2G5YH@200795|Chloroflexi 200795|Chloroflexi I Myo-inositol-1-phosphate synthase, GAPDH domain protein - - 5.5.1.4 ko:K01858 ko00521,ko00562,ko01100,ko01130,map00521,map00562,map01100,map01130 - R07324 RC01804 ko00000,ko00001,ko01000 - - - Inos-1-P_synth YYD2_k127_2721909_1 926569.ANT_23660 1.232e-27 116.0 COG0671@1|root,COG0671@2|Bacteria 2|Bacteria I phosphatidate phosphatase activity - - 3.6.1.27 ko:K19302 ko00550,map00550 - R05627 RC00002 ko00000,ko00001,ko01000,ko01011 - - - PAP2 YYD2_k127_2721909_0 926569.ANT_23650 3.786e-51 199.0 COG1305@1|root,COG1305@2|Bacteria,2G66M@200795|Chloroflexi 200795|Chloroflexi E PFAM transglutaminase domain protein - - - - - - - - - - - - DUF4129,Transglut_core YYD2_k127_2729309_2 573370.DMR_42780 1.041e-20 102.0 COG2230@1|root,COG2230@2|Bacteria,1NKE6@1224|Proteobacteria,432ND@68525|delta/epsilon subdivisions,2WXTJ@28221|Deltaproteobacteria,2M8K4@213115|Desulfovibrionales 28221|Deltaproteobacteria M Methyltransferase domain - - - - - - - - - - - - Methyltransf_11,Methyltransf_23 YYD2_k127_2729309_0 926569.ANT_12840 7.215e-235 749.0 COG1674@1|root,COG1674@2|Bacteria,2G5XC@200795|Chloroflexi 200795|Chloroflexi D PFAM cell divisionFtsK SpoIIIE - - - ko:K03466 - - - - ko00000,ko03036 3.A.12 - - FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma YYD2_k127_2784610_1 926569.ANT_14300 3.43e-111 362.0 COG2197@1|root,COG2197@2|Bacteria,2G80G@200795|Chloroflexi 200795|Chloroflexi K Two component transcriptional regulator, LuxR family - - - - - - - - - - - - GerE,Response_reg YYD2_k127_2784610_3 237368.SCABRO_00409 2.474e-40 156.0 COG1670@1|root,COG1670@2|Bacteria 2|Bacteria J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins BB1022 - 2.3.1.128 ko:K03790 - - - - ko00000,ko01000,ko03009 - - - Acetyltransf_3 YYD2_k127_2784610_0 909663.KI867150_gene1648 7.425e-144 466.0 COG0438@1|root,COG0438@2|Bacteria,1MY5T@1224|Proteobacteria,42NYR@68525|delta/epsilon subdivisions,2WJB1@28221|Deltaproteobacteria,2MR6Y@213462|Syntrophobacterales 28221|Deltaproteobacteria M Glycosyl transferase 4-like domain - - - - - - - - - - - - Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1 YYD2_k127_2784610_2 335541.Swol_0731 2.36e-51 196.0 COG0472@1|root,COG0472@2|Bacteria 2|Bacteria M phospho-N-acetylmuramoyl-pentapeptide-transferase activity wbpL - 2.7.8.33,2.7.8.35 ko:K02851,ko:K13007 - - R08856 RC00002 ko00000,ko01000,ko01003,ko01005 - - - Glycos_transf_4 YYD2_k127_2784610_4 1499967.BAYZ01000066_gene6064 0.0003108 48.0 COG5360@1|root,COG5360@2|Bacteria,2NQJM@2323|unclassified Bacteria 2|Bacteria S Heparinase II/III N-terminus - - - - - - - - - - - - Hepar_II_III,Hepar_II_III_N YYD2_k127_2785138_0 926569.ANT_06590 5.341e-89 297.0 COG2199@1|root,COG3706@2|Bacteria,2G85T@200795|Chloroflexi 200795|Chloroflexi T Response regulator receiver - - - - - - - - - - - - GGDEF,Response_reg YYD2_k127_2785138_1 926569.ANT_06600 8.705e-57 214.0 COG2203@1|root,COG5002@1|root,COG2203@2|Bacteria,COG5002@2|Bacteria,2G7NF@200795|Chloroflexi 200795|Chloroflexi T histidine kinase A domain protein - - - - - - - - - - - - GAF_2,HATPase_c,HisKA YYD2_k127_2787993_2 290397.Adeh_2002 3.964e-80 280.0 COG3005@1|root,COG3005@2|Bacteria,1QYG3@1224|Proteobacteria,43CC8@68525|delta/epsilon subdivisions,2X7N4@28221|Deltaproteobacteria 28221|Deltaproteobacteria C Cytochrome c3 - - - - - - - - - - - - Paired_CXXCH_1 YYD2_k127_2787993_3 926569.ANT_26970 5.336e-42 165.0 COG2010@1|root,COG2864@1|root,COG2010@2|Bacteria,COG2864@2|Bacteria 2|Bacteria C formate dehydrogenase - - - - - - - - - - - - Cytochrom_c3_2,Ni_hydr_CYTB,PSCyt1 YYD2_k127_2787993_0 926569.ANT_26980 1.935e-115 385.0 COG3005@1|root,COG3005@2|Bacteria 2|Bacteria C denitrification pathway - - - - - - - - - - - - Cytochrom_C552,Cytochrom_c3_2,Paired_CXXCH_1 YYD2_k127_2787993_1 926569.ANT_26970 2.409e-93 320.0 COG2010@1|root,COG2864@1|root,COG2010@2|Bacteria,COG2864@2|Bacteria 2|Bacteria C formate dehydrogenase - - - - - - - - - - - - Cytochrom_c3_2,Ni_hydr_CYTB,PSCyt1 YYD2_k127_2791774_3 1382356.JQMP01000003_gene2108 3.42e-45 172.0 COG5617@1|root,COG5617@2|Bacteria 2|Bacteria M Psort location CytoplasmicMembrane, score - - - - - - - - - - - - PMT_2,PTPS_related YYD2_k127_2791774_0 1173028.ANKO01000042_gene858 6.789e-290 914.0 COG2366@1|root,COG2366@2|Bacteria,1G4M5@1117|Cyanobacteria 1117|Cyanobacteria S penicillin amidase - - 3.5.1.11 ko:K01434 ko00311,ko01130,map00311,map01130 - R02170 RC00166,RC00328 ko00000,ko00001,ko01000,ko01002 - - - Penicil_amidase YYD2_k127_2791774_4 667014.Thein_0610 1.887e-09 62.0 COG2331@1|root,COG2331@2|Bacteria,2GI2F@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria S Zinc ribbon domain - - - - - - - - - - - - Zn-ribbon_8 YYD2_k127_2791774_1 768671.ThimaDRAFT_1778 7.666e-134 433.0 COG2515@1|root,COG2515@2|Bacteria,1MVYF@1224|Proteobacteria,1RMYP@1236|Gammaproteobacteria,1X0CX@135613|Chromatiales 135613|Chromatiales E Pyridoxal-phosphate dependent enzyme - - 4.4.1.25 ko:K17950 ko00270,map00270 - R07634 RC01784 ko00000,ko00001,ko01000 - - - PALP YYD2_k127_2791774_2 926569.ANT_22600 2.857e-58 205.0 COG2348@1|root,COG2348@2|Bacteria,2G6KK@200795|Chloroflexi 200795|Chloroflexi V PFAM Methicillin resistance protein - - - - - - - - - - - - FemAB YYD2_k127_2798352_0 926569.ANT_06070 2.87e-149 480.0 COG1181@1|root,COG1181@2|Bacteria,2G5RS@200795|Chloroflexi 200795|Chloroflexi F Belongs to the D-alanine--D-alanine ligase family - - 6.3.2.4 ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 - R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Dala_Dala_lig_C YYD2_k127_2798352_1 926569.ANT_23520 2.288e-60 218.0 2E3IJ@1|root,32YH0@2|Bacteria,2G7AM@200795|Chloroflexi 200795|Chloroflexi S Predicted membrane protein (DUF2085) - - - - - - - - - - - - DUF2085 YYD2_k127_2798352_2 926569.ANT_23560 9.39e-54 196.0 2DM5T@1|root,31U0Y@2|Bacteria,2G78W@200795|Chloroflexi 200795|Chloroflexi S Domain of unknown function (DUF4126) - - - - - - - - - - - - DUF4126 YYD2_k127_2798352_3 1382306.JNIM01000001_gene868 2.449e-32 132.0 COG3557@1|root,COG3557@2|Bacteria,2G79G@200795|Chloroflexi 200795|Chloroflexi J Protein of unknown function (DUF402) - - - ko:K07586 - - - - ko00000 - - - DUF402 YYD2_k127_2798352_4 926569.ANT_23590 3.583e-09 63.0 COG3842@1|root,COG3842@2|Bacteria,2G62Z@200795|Chloroflexi 200795|Chloroflexi P TOBE domain - - 3.6.3.31 ko:K02062,ko:K11072 ko02010,map02010 M00191,M00299 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.11.1,3.A.1.19 - - ABC_tran,TOBE_2 YYD2_k127_2813278_0 926550.CLDAP_14400 1.292e-304 951.0 COG0280@1|root,COG0281@1|root,COG0280@2|Bacteria,COG0281@2|Bacteria,2G65R@200795|Chloroflexi 200795|Chloroflexi C malic protein domain protein - - 1.1.1.38,1.1.1.40 ko:K00027,ko:K00029 ko00620,ko00710,ko01100,ko01120,ko01200,ko02020,map00620,map00710,map01100,map01120,map01200,map02020 M00169,M00172 R00214,R00216 RC00105 ko00000,ko00001,ko00002,ko01000 - - - ACT_4,Malic_M,malic YYD2_k127_2813278_2 926569.ANT_13200 8.156e-176 567.0 COG0536@1|root,COG0536@2|Bacteria,2G5ZT@200795|Chloroflexi 200795|Chloroflexi S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control obg - - ko:K03979 - - - - ko00000,ko01000,ko03009 - - - DUF1967,GTP1_OBG,MMR_HSR1 YYD2_k127_2813278_6 1158608.I583_00061 2.906e-07 62.0 COG1388@1|root,COG1705@1|root,COG1388@2|Bacteria,COG1705@2|Bacteria,1UYRM@1239|Firmicutes,4HAU6@91061|Bacilli,4AZE2@81852|Enterococcaceae 91061|Bacilli MNU defense response to other organism acmA GO:0005575,GO:0005576 - ko:K02395,ko:K19220,ko:K19223 - - - - ko00000,ko01000,ko01002,ko01011,ko02035 - CBM50 - Glucosaminidase,LysM YYD2_k127_2813278_3 926569.ANT_13130 2.282e-97 323.0 COG0463@1|root,COG0463@2|Bacteria 2|Bacteria M Glycosyl transferase, family 2 - - - - - - - - - - - - Glycos_transf_2 YYD2_k127_2813278_1 926569.ANT_13370 1.036e-213 670.0 COG0464@1|root,COG0464@2|Bacteria,2G642@200795|Chloroflexi 200795|Chloroflexi O SMART AAA ATPase - - - - - - - - - - - - AAA YYD2_k127_2813278_4 926569.ANT_11860 9.865e-89 301.0 COG0647@1|root,COG0647@2|Bacteria,2G6QY@200795|Chloroflexi 200795|Chloroflexi G PFAM Haloacid dehalogenase domain protein hydrolase - - - ko:K02566 - - - - ko00000 - - - Hydrolase_6,Hydrolase_like YYD2_k127_2813278_5 224325.AF_0075 6.226e-16 83.0 COG0608@1|root,arCOG00427@2157|Archaea,2Y2ZU@28890|Euryarchaeota,246X7@183980|Archaeoglobi 183980|Archaeoglobi L phosphoesterase RecJ domain protein - - - - - - - - - - - - - YYD2_k127_282503_6 1123009.AUID01000001_gene1168 2.144e-18 85.0 COG4443@1|root,COG4443@2|Bacteria,1VEFE@1239|Firmicutes,24QV3@186801|Clostridia,269UQ@186813|unclassified Clostridiales 186801|Clostridia S Transcriptional Coactivator p15 (PC4) - - - - - - - - - - - - PC4 YYD2_k127_282503_4 679926.Mpet_1639 2.358e-47 178.0 COG2020@1|root,arCOG03580@2157|Archaea,2Y4MT@28890|Euryarchaeota 28890|Euryarchaeota O PFAM Isoprenylcysteine carboxyl methyltransferase - - - - - - - - - - - - ICMT YYD2_k127_282503_0 926569.ANT_25100 4.665e-235 742.0 COG3276@1|root,COG3276@2|Bacteria,2G5JX@200795|Chloroflexi 200795|Chloroflexi J Selenocysteine-specific translation elongation factor selB - - ko:K03833 - - - - ko00000,ko03012 - - - GTP_EFTU,GTP_EFTU_D2,SelB-wing_2,SelB-wing_3 YYD2_k127_282503_2 926569.ANT_25090 8.996e-77 272.0 COG4942@1|root,COG4942@2|Bacteria,2G960@200795|Chloroflexi 200795|Chloroflexi D peptidase - - - - - - - - - - - - - YYD2_k127_282503_1 926569.ANT_00310 1.473e-86 304.0 COG0651@1|root,COG0651@2|Bacteria,2G9I2@200795|Chloroflexi 200795|Chloroflexi CP Proton-conducting membrane transporter - - - - - - - - - - - - Proton_antipo_M YYD2_k127_2838872_2 926569.ANT_14560 3.126e-80 284.0 COG0790@1|root,COG3359@1|root,COG0790@2|Bacteria,COG3359@2|Bacteria,2G6TK@200795|Chloroflexi 200795|Chloroflexi L RNase_H superfamily - - - ko:K07502 - - - - ko00000 - - - RNase_H_2 YYD2_k127_2838872_1 1173028.ANKO01000127_gene4197 5.578e-93 326.0 COG2211@1|root,COG2211@2|Bacteria,1G0ZY@1117|Cyanobacteria,1H6Y4@1150|Oscillatoriales 1117|Cyanobacteria G COG2211 Na melibiose symporter and related melB - - ko:K03292 - - - - ko00000 2.A.2 - - MFS_2 YYD2_k127_2838872_0 926569.ANT_17710 1.11e-134 435.0 COG1216@1|root,COG1216@2|Bacteria,2G961@200795|Chloroflexi 200795|Chloroflexi H Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 YYD2_k127_2838872_4 935837.JAEK01000070_gene3331 4.201e-32 136.0 COG0457@1|root,COG0457@2|Bacteria,1U9ZE@1239|Firmicutes,4IK7A@91061|Bacilli,1ZFKG@1386|Bacillus 91061|Bacilli S Sulfotransferase domain - - - - - - - - - - - - Sulfotransfer_1 YYD2_k127_2838872_3 102129.Lepto7375DRAFT_6640 5.037e-35 145.0 COG0457@1|root,COG0457@2|Bacteria,1GAAM@1117|Cyanobacteria,1HDEW@1150|Oscillatoriales 1117|Cyanobacteria S Sulfotransferase domain - - - - - - - - - - - - Sulfotransfer_1 YYD2_k127_2838872_5 1232410.KI421413_gene798 5.997e-27 111.0 COG0350@1|root,COG0350@2|Bacteria,1N2YQ@1224|Proteobacteria,42TN9@68525|delta/epsilon subdivisions,2WRG0@28221|Deltaproteobacteria,43VFA@69541|Desulfuromonadales 28221|Deltaproteobacteria H 6-O-methylguanine DNA methyltransferase, DNA binding domain ogt - 2.1.1.63 ko:K00567 - - - - ko00000,ko01000,ko03400 - - - DNA_binding_1 YYD2_k127_2860955_0 926550.CLDAP_23290 7.593e-207 657.0 COG1132@1|root,COG1132@2|Bacteria,2G7J5@200795|Chloroflexi 200795|Chloroflexi V ABC transporter, transmembrane region - - - ko:K06147 - - - - ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 - - ABC_membrane,ABC_tran YYD2_k127_2860955_2 797210.Halxa_1670 3.871e-15 86.0 COG0454@1|root,arCOG00845@2157|Archaea,2XTIN@28890|Euryarchaeota,23TT3@183963|Halobacteria 183963|Halobacteria K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - - - - - - - - - - Acetyltransf_1 YYD2_k127_2860955_1 926569.ANT_05370 1.412e-56 199.0 COG2723@1|root,COG2723@2|Bacteria,2G5QE@200795|Chloroflexi 200795|Chloroflexi G PFAM glycoside hydrolase, family 1 - - 3.2.1.21 ko:K05350 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - - - Glyco_hydro_1 YYD2_k127_2864288_0 926569.ANT_20420 2.208e-95 318.0 COG1197@1|root,COG1197@2|Bacteria,2G5UW@200795|Chloroflexi 200795|Chloroflexi L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site mfd - - ko:K03723 ko03420,map03420 - - - ko00000,ko00001,ko01000,ko03400 - - - CarD_CdnL_TRCF,DEAD,Helicase_C,TRCF YYD2_k127_2864288_2 68219.JNXI01000002_gene3959 5.528e-63 225.0 2EYIJ@1|root,33RSC@2|Bacteria,2IPA3@201174|Actinobacteria 201174|Actinobacteria - - - - - - - - - - - - - - - YYD2_k127_2866082_5 118168.MC7420_7216 7.954e-32 130.0 COG1943@1|root,COG1943@2|Bacteria,1G7D3@1117|Cyanobacteria,1HBY0@1150|Oscillatoriales 1117|Cyanobacteria L Transposase IS200 like - - - - - - - - - - - - Y1_Tnp YYD2_k127_2866082_6 313596.RB2501_12022 7.622e-12 77.0 COG0823@1|root,COG0823@2|Bacteria,4NG4S@976|Bacteroidetes,1I1I2@117743|Flavobacteriia 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - ko:K03641 - - - - ko00000,ko02000 2.C.1.2 - - PD40 YYD2_k127_2866082_3 247633.GP2143_14561 1.39e-109 370.0 COG2211@1|root,COG2211@2|Bacteria 2|Bacteria G Major facilitator Superfamily - - - - - - - - - - - - MFS_1 YYD2_k127_2866082_0 926569.ANT_22400 3.222e-261 818.0 COG3533@1|root,COG3533@2|Bacteria,2G7X9@200795|Chloroflexi 200795|Chloroflexi S COGs COG3533 conserved - - - ko:K09955 - - - - ko00000 - - - Glyco_hydro_127 YYD2_k127_2866082_4 1121097.JCM15093_198 4.677e-41 155.0 COG4319@1|root,COG4319@2|Bacteria,4NT6G@976|Bacteroidetes,2FTV9@200643|Bacteroidia,4AU7F@815|Bacteroidaceae 976|Bacteroidetes S Domain of unknown function (DUF4440) - - - - - - - - - - - - DUF4440 YYD2_k127_2866082_1 926569.ANT_22380 3.194e-173 549.0 COG3250@1|root,COG3250@2|Bacteria 2|Bacteria G beta-galactosidase activity - - 3.2.1.23,3.2.1.97 ko:K01190,ko:K17624 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - GH101 - DUF2804 YYD2_k127_2866082_2 1321778.HMPREF1982_04430 9.756e-145 471.0 COG3250@1|root,COG3250@2|Bacteria,1TQAM@1239|Firmicutes,248XS@186801|Clostridia 186801|Clostridia G Belongs to the glycosyl hydrolase 2 family - - - - - - - - - - - - Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N YYD2_k127_287991_1 926569.ANT_05530 9.242e-69 238.0 COG1363@1|root,COG1363@2|Bacteria,2G6EE@200795|Chloroflexi 200795|Chloroflexi G peptidase M42 family protein - - - - - - - - - - - - Peptidase_M42 YYD2_k127_287991_2 485913.Krac_2293 2.351e-39 155.0 COG3340@1|root,COG3340@2|Bacteria 2|Bacteria E Belongs to the peptidase S51 family - - - - - - - - - - - - Peptidase_S51 YYD2_k127_287991_0 926569.ANT_05540 8.005e-91 309.0 COG1363@1|root,COG1363@2|Bacteria,2G6EE@200795|Chloroflexi 200795|Chloroflexi G peptidase M42 family protein - - - - - - - - - - - - Peptidase_M42 YYD2_k127_287991_3 926569.ANT_05550 2.39e-36 153.0 COG2182@1|root,COG2182@2|Bacteria 2|Bacteria G maltose binding - - - ko:K02027,ko:K15770 ko02010,map02010 M00207,M00491 - - ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.16,3.A.1.1.2 - - SBP_bac_1,SBP_bac_8 YYD2_k127_287991_4 926569.ANT_23620 2.524e-12 70.0 COG2839@1|root,COG2839@2|Bacteria 2|Bacteria S Protein of unknown function (DUF456) yqgC - - ko:K09793 - - - - ko00000 - - - DUF456 YYD2_k127_2886589_1 926569.ANT_03590 1.202e-42 169.0 COG0744@1|root,COG0744@2|Bacteria,2G5ZG@200795|Chloroflexi 200795|Chloroflexi M PFAM glycosyl transferase, family 51 - - - - - - - - - - - - Transgly,Transpeptidase YYD2_k127_2886589_0 562970.Btus_0103 4.307e-82 284.0 COG0294@1|root,COG0294@2|Bacteria,1TPKT@1239|Firmicutes,4H9SY@91061|Bacilli,277X0@186823|Alicyclobacillaceae 91061|Bacilli H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives folP GO:0003674,GO:0003824,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.15 ko:K00796 ko00790,ko01100,map00790,map01100 M00126,M00841 R03066,R03067 RC00121,RC00842 ko00000,ko00001,ko00002,ko01000 - - - Pterin_bind YYD2_k127_2916723_1 926569.ANT_17520 6.706e-36 144.0 COG2091@1|root,COG2091@2|Bacteria,2G74T@200795|Chloroflexi 200795|Chloroflexi H 4'-phosphopantetheinyl transferase superfamily - - - ko:K06133 ko00770,map00770 - R01625 RC00002 ko00000,ko00001,ko01000 - - - ACPS YYD2_k127_2916723_0 926569.ANT_17510 9.766e-206 654.0 COG2070@1|root,COG2070@2|Bacteria 2|Bacteria S nitronate monooxygenase activity pfaD - - - - - - - - - - - NMO YYD2_k127_2931032_8 926569.ANT_23190 1.604e-06 55.0 COG0457@1|root,COG0457@2|Bacteria,2G8PU@200795|Chloroflexi 200795|Chloroflexi S Peptidase_C39 like family - - - - - - - - - - - - Peptidase_C39_2 YYD2_k127_2931032_0 926569.ANT_30670 9.47e-297 921.0 COG0443@1|root,COG0443@2|Bacteria,2G5U5@200795|Chloroflexi 200795|Chloroflexi O Heat shock 70 kDa protein - - - ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 - - - ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 1.A.33.1 - - HSP70 YYD2_k127_2931032_3 926569.ANT_12920 6.997e-94 321.0 COG0455@1|root,COG0745@1|root,COG0455@2|Bacteria,COG0745@2|Bacteria,2G8KV@200795|Chloroflexi 200795|Chloroflexi KT AAA domain - - - ko:K02282 - - - - ko00000,ko02035,ko02044 - - - Response_reg YYD2_k127_2931032_4 926569.ANT_12910 1.608e-67 238.0 COG0846@1|root,COG0846@2|Bacteria,2G6QQ@200795|Chloroflexi 200795|Chloroflexi K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form - - - ko:K12410 - - - - ko00000,ko01000 - - - SIR2 YYD2_k127_2931032_6 1385519.N801_15195 1.954e-48 189.0 COG0642@1|root,COG2205@2|Bacteria,2I2M2@201174|Actinobacteria,4FFYD@85021|Intrasporangiaceae 201174|Actinobacteria T GAF domain - - - - - - - - - - - - DUF3365,GAF_2,HAMP,HATPase_c,HisKA,Response_reg YYD2_k127_2931032_1 926569.ANT_12970 1.203e-227 719.0 COG0323@1|root,COG0323@2|Bacteria,2G5XU@200795|Chloroflexi 200795|Chloroflexi L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex mutL - - ko:K03572 ko03430,map03430 - - - ko00000,ko00001,ko03400 - - - DNA_mis_repair,HATPase_c_3,MutL_C YYD2_k127_2931032_5 926569.ANT_12960 2.076e-53 195.0 COG1011@1|root,COG1011@2|Bacteria,2G979@200795|Chloroflexi 200795|Chloroflexi S TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - ko:K07025 - - - - ko00000 - - - HAD_2 YYD2_k127_2931032_2 926569.ANT_12940 3.635e-143 464.0 COG0793@1|root,COG0793@2|Bacteria,2G6HR@200795|Chloroflexi 200795|Chloroflexi M Belongs to the peptidase S41A family - - 3.4.21.102 ko:K03797 - - - - ko00000,ko01000,ko01002 - - - PDZ_2,Peptidase_S41 YYD2_k127_2932389_1 1168034.FH5T_05690 2.453e-11 79.0 COG1572@1|root,COG1572@2|Bacteria,4NDY7@976|Bacteroidetes,2FMIV@200643|Bacteroidia 976|Bacteroidetes S Peptidase family C25 porU - - - - - - - - - - - Peptidase_C25 YYD2_k127_2932389_2 471854.Dfer_2337 7.026e-08 68.0 COG4886@1|root,COG5492@1|root,COG4886@2|Bacteria,COG5492@2|Bacteria,4NUJ5@976|Bacteroidetes 976|Bacteroidetes N regulator of chromosome condensation, RCC1 - - - - - - - - - - - - - YYD2_k127_2932389_0 713586.KB900536_gene2793 4.28e-80 306.0 COG1361@1|root,COG1361@2|Bacteria,1QVSF@1224|Proteobacteria,1T2IX@1236|Gammaproteobacteria 1236|Gammaproteobacteria M domain protein - - - - - - - - - - - - - YYD2_k127_2960176_1 1443665.JACA01000001_gene3010 1.897e-61 217.0 COG0328@1|root,COG3341@1|root,COG0328@2|Bacteria,COG3341@2|Bacteria,4NI01@976|Bacteroidetes,1HXD6@117743|Flavobacteriia,2YH85@290174|Aquimarina 976|Bacteroidetes L Caulimovirus viroplasmin rnhA - 3.1.26.4 ko:K03469 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - Cauli_VI,RNase_H YYD2_k127_2960176_2 338966.Ppro_1867 7.227e-52 189.0 COG1335@1|root,COG1335@2|Bacteria,1RDHA@1224|Proteobacteria,42S3C@68525|delta/epsilon subdivisions,2X5QU@28221|Deltaproteobacteria 28221|Deltaproteobacteria Q Isochorismatase family - - - - - - - - - - - - Isochorismatase YYD2_k127_2960176_0 1382306.JNIM01000001_gene3678 8.55e-94 320.0 COG0501@1|root,COG0501@2|Bacteria,2G6KE@200795|Chloroflexi 200795|Chloroflexi O PFAM peptidase M48 Ste24p - - 3.4.24.84 ko:K06013 ko00900,ko01130,map00900,map01130 - R09845 RC00141 ko00000,ko00001,ko01000,ko01002,ko04147 - - - Peptidase_M48,Peptidase_M48_N YYD2_k127_2961569_0 316067.Geob_1283 1.595e-22 113.0 COG1361@1|root,COG1404@1|root,COG3210@1|root,COG4625@1|root,COG4886@1|root,COG1361@2|Bacteria,COG1404@2|Bacteria,COG3210@2|Bacteria,COG4625@2|Bacteria,COG4886@2|Bacteria,1QUXB@1224|Proteobacteria 1224|Proteobacteria U 6-phosphogluconolactonase activity - - - - - - - - - - - - Autotransporter,Cadherin_3,DUF11,DUF4347,He_PIG,PATR YYD2_k127_2991250_2 871963.Desdi_0163 5.261e-20 98.0 COG0723@1|root,COG0723@2|Bacteria,1VJ51@1239|Firmicutes,24T68@186801|Clostridia,264CW@186807|Peptococcaceae 186801|Clostridia C PFAM Rieske 2Fe-2S - - 1.10.9.1 ko:K02636 ko00195,ko01100,map00195,map01100 M00162 R03817,R08409 RC01002 ko00000,ko00001,ko00002,ko00194,ko01000 - - - Rieske YYD2_k127_2991250_0 768704.Desmer_1885 6.381e-145 480.0 COG0247@1|root,COG2181@1|root,COG0247@2|Bacteria,COG2181@2|Bacteria,1TPG1@1239|Firmicutes,24BBE@186801|Clostridia,260K6@186807|Peptococcaceae 186801|Clostridia C Fe-S oxidoreductase - - - - - - - - - - - - CCG,Fer4_8,Nitrate_red_gam YYD2_k127_2991250_1 1191523.MROS_1601 1.772e-95 327.0 COG0668@1|root,COG0668@2|Bacteria 2|Bacteria M transmembrane transport mscS2 - - ko:K16053 - - - - ko00000,ko02000 1.A.23.4.5 - - MS_channel YYD2_k127_2992996_9 1303518.CCALI_01587 1.078e-14 74.0 COG0277@1|root,COG0277@2|Bacteria 2|Bacteria C FAD linked oxidase domain protein dprE1 GO:0000271,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010383,GO:0016020,GO:0016051,GO:0031221,GO:0033692,GO:0034637,GO:0034645,GO:0035884,GO:0040007,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0070589,GO:0070592,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901576 1.1.3.8,1.1.98.3 ko:K00103,ko:K16653 ko00053,ko01100,map00053,map01100 M00129 R00647,R03184,R10053 RC00195,RC00346,RC00869 ko00000,ko00001,ko00002,ko01000 - - - ALO,FAD_binding_4 YYD2_k127_2992996_6 316274.Haur_0454 3.174e-47 179.0 COG0321@1|root,COG0321@2|Bacteria,2G8KT@200795|Chloroflexi,375KR@32061|Chloroflexia 32061|Chloroflexia H Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate lipB GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 ko:K03801 ko00785,ko01100,map00785,map01100 - R07766,R07769 RC00039,RC00992,RC02867 ko00000,ko00001,ko01000 - - - BPL_LplA_LipB YYD2_k127_2992996_8 926569.ANT_14090 6.419e-27 117.0 COG1716@1|root,COG1716@2|Bacteria 2|Bacteria T histone H2A K63-linked ubiquitination - - - - - - - - - - - - FHA,RDD,Yop-YscD_cpl YYD2_k127_2992996_1 926569.ANT_15450 4.057e-103 344.0 COG0598@1|root,COG0598@2|Bacteria 2|Bacteria P Magnesium transport protein CorA corA - - ko:K03284 - - - - ko00000,ko02000 1.A.35.1,1.A.35.3 - - CorA YYD2_k127_2992996_2 1347086.CCBA010000025_gene3114 8.888e-83 291.0 COG3386@1|root,COG3386@2|Bacteria,1V1TK@1239|Firmicutes,4HG0A@91061|Bacilli,1ZAVX@1386|Bacillus 91061|Bacilli G SMP-30/Gluconolaconase/LRE-like region yvrE GO:0003674,GO:0003824,GO:0004341,GO:0005488,GO:0005509,GO:0005575,GO:0005576,GO:0005975,GO:0005996,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016051,GO:0016053,GO:0016787,GO:0016788,GO:0019752,GO:0019852,GO:0019853,GO:0042364,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046364,GO:0046394,GO:0046872,GO:0051186,GO:0051188,GO:0052689,GO:0071704,GO:1901576 - ko:K14274 ko00040,map00040 - R02427 RC00713 ko00000,ko00001,ko01000 - - - SGL YYD2_k127_2992996_7 216595.PFLU_2071 1.382e-43 173.0 COG3594@1|root,COG3594@2|Bacteria,1RGHJ@1224|Proteobacteria,1SSVD@1236|Gammaproteobacteria,1YSK9@136843|Pseudomonas fluorescens group 1236|Gammaproteobacteria G Acyltransferase family pslL - - ko:K21005 ko02025,map02025 - - - ko00000,ko00001 - - - Acyl_transf_3 YYD2_k127_2992996_5 926569.ANT_15290 2.018e-51 186.0 COG0711@1|root,COG0711@2|Bacteria,2G79J@200795|Chloroflexi 200795|Chloroflexi C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) - - - - - - - - - - - - - YYD2_k127_2992996_3 926569.ANT_15280 1.369e-67 235.0 COG0669@1|root,COG0669@2|Bacteria,2G6NZ@200795|Chloroflexi 200795|Chloroflexi F Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate coaD - 2.7.7.3 ko:K00954 ko00770,ko01100,map00770,map01100 M00120 R03035 RC00002 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_like YYD2_k127_2992996_0 926569.ANT_15270 1.127e-288 908.0 COG1200@1|root,COG1200@2|Bacteria,2G5YM@200795|Chloroflexi 200795|Chloroflexi L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) recG - 3.6.4.12 ko:K03655 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C,RecG_wedge YYD2_k127_2992996_4 644966.Tmar_2029 2.21e-57 205.0 COG0180@1|root,COG0180@2|Bacteria,1TPY7@1239|Firmicutes,248RC@186801|Clostridia,3WCG6@538999|Clostridiales incertae sedis 186801|Clostridia J tRNA synthetases class I (W and Y) trpS - 6.1.1.2 ko:K01867 ko00970,map00970 M00359,M00360 R03664 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_1b YYD2_k127_3000088_0 1246448.ANAZ01000009_gene2689 2.088e-143 464.0 COG0626@1|root,COG0626@2|Bacteria,2GJ5S@201174|Actinobacteria,4EIFC@85012|Streptosporangiales 201174|Actinobacteria E Cys/Met metabolism PLP-dependent enzyme metB GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009086,GO:0009092,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0017144,GO:0019279,GO:0019343,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071265,GO:0071266,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48 ko:K01739 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 M00017 R00999,R01288,R02508,R03217,R03260,R04944,R04945,R04946 RC00020,RC00056,RC00069,RC00420,RC02848,RC02866 ko00000,ko00001,ko00002,ko01000 - - iNJ661.Rv1079 Cys_Met_Meta_PP YYD2_k127_3000088_5 374847.Kcr_0783 2.867e-06 57.0 arCOG07069@1|root,arCOG07069@2157|Archaea 2157|Archaea - - - - - - - - - - - - - - - YYD2_k127_3000088_1 693661.Arcve_0215 1.815e-36 150.0 COG0109@1|root,arCOG00479@2157|Archaea,2XUEM@28890|Euryarchaeota,247C6@183980|Archaeoglobi 183980|Archaeoglobi H Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group ctaB - 2.5.1.141 ko:K02257 ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714 M00154 R07411 RC01786 ko00000,ko00001,ko00002,ko01000,ko01006,ko03029 - - - UbiA YYD2_k127_3000088_2 448385.sce5487 1.844e-28 126.0 COG0515@1|root,COG1262@1|root,COG0515@2|Bacteria,COG1262@2|Bacteria,1MV1P@1224|Proteobacteria,430N6@68525|delta/epsilon subdivisions,2WVRE@28221|Deltaproteobacteria 28221|Deltaproteobacteria KLT Protein kinase domain - - - - - - - - - - - - FGE-sulfatase,Pkinase YYD2_k127_3000088_3 410359.Pcal_1023 3.311e-13 79.0 arCOG07070@1|root,arCOG07070@2157|Archaea 2157|Archaea - - - - - - - - - - - - - - - YYD2_k127_3001894_2 926569.ANT_23140 1.041e-65 236.0 COG0438@1|root,COG0438@2|Bacteria 2|Bacteria M transferase activity, transferring glycosyl groups - - - - - - - - - - - - Glyco_trans_1_4,Glyco_trans_4_2,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1 YYD2_k127_3001894_0 926550.CLDAP_35420 1.171e-173 554.0 COG1004@1|root,COG1004@2|Bacteria,2G62F@200795|Chloroflexi 200795|Chloroflexi C Belongs to the UDP-glucose GDP-mannose dehydrogenase family - - 1.1.1.22 ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 M00014,M00129,M00361,M00362 R00286 RC00291 ko00000,ko00001,ko00002,ko01000 - - - UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N YYD2_k127_3001894_1 926569.ANT_27790 5.603e-108 358.0 COG0375@1|root,COG0500@1|root,COG0375@2|Bacteria,COG2226@2|Bacteria,2G8EN@200795|Chloroflexi 200795|Chloroflexi Q Methyltransferase domain - - - - - - - - - - - - Methyltransf_11 YYD2_k127_3001894_3 1131269.AQVV01000005_gene388 7.292e-65 236.0 COG3639@1|root,COG3639@2|Bacteria 2|Bacteria P organic phosphonate transmembrane transporter activity phnE - - ko:K02042 ko02010,map02010 M00223 - - ko00000,ko00001,ko00002,ko02000 3.A.1.9 - - BPD_transp_1 YYD2_k127_3001894_4 1307761.L21SP2_1484 2.208e-64 226.0 COG3639@1|root,COG3639@2|Bacteria,2J6TW@203691|Spirochaetes 203691|Spirochaetes U ABC transporter (Permease) - - - ko:K02042 ko02010,map02010 M00223 - - ko00000,ko00001,ko00002,ko02000 3.A.1.9 - - BPD_transp_1 YYD2_k127_3036184_2 373903.Hore_15280 1.96e-94 314.0 COG2723@1|root,COG2723@2|Bacteria,1TP19@1239|Firmicutes,2485V@186801|Clostridia,3WADV@53433|Halanaerobiales 186801|Clostridia G PFAM Glycosyl hydrolase family 1 - - 3.2.1.21 ko:K05350 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - - - Glyco_hydro_1 YYD2_k127_3036184_4 926550.CLDAP_20700 9.036e-89 298.0 COG1136@1|root,COG1136@2|Bacteria,2G6K8@200795|Chloroflexi 200795|Chloroflexi V ATPases associated with a variety of cellular activities - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran YYD2_k127_3036184_1 926550.CLDAP_20690 1.395e-95 326.0 COG0577@1|root,COG0577@2|Bacteria,2G6RX@200795|Chloroflexi 200795|Chloroflexi V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - - YYD2_k127_3036184_7 1303518.CCALI_00071 1.72e-24 111.0 COG1225@1|root,COG1225@2|Bacteria 2|Bacteria O peroxiredoxin activity - - - - - - - - - - - - AhpC-TSA YYD2_k127_3036184_5 484770.UFO1_1182 5.277e-79 272.0 COG1136@1|root,COG1136@2|Bacteria,1TP6H@1239|Firmicutes,4H387@909932|Negativicutes 909932|Negativicutes V ATPases associated with a variety of cellular activities - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran YYD2_k127_3036184_3 357808.RoseRS_3212 2.577e-92 316.0 COG0664@1|root,COG1136@1|root,COG0664@2|Bacteria,COG1136@2|Bacteria,2G6C9@200795|Chloroflexi,37685@32061|Chloroflexia 32061|Chloroflexia V ABC transporter related - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran,cNMP_binding YYD2_k127_3036184_0 926569.ANT_01120 1.794e-151 508.0 COG0577@1|root,COG0577@2|Bacteria,2G68F@200795|Chloroflexi 200795|Chloroflexi V COGs COG4591 ABC-type transport system involved in lipoprotein release permease component - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD YYD2_k127_3036184_6 926550.CLDAP_20680 1.668e-28 127.0 COG0845@1|root,COG0845@2|Bacteria,2G8HH@200795|Chloroflexi 200795|Chloroflexi M Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - - - - - - - - - - Biotin_lipoyl_2,HlyD_D23 YYD2_k127_3064211_3 445971.ANASTE_01797 4.119e-09 58.0 COG3153@1|root,COG3153@2|Bacteria,1V3PW@1239|Firmicutes,24ACS@186801|Clostridia,25X57@186806|Eubacteriaceae 186801|Clostridia S Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_1,Acetyltransf_7,Acetyltransf_9 YYD2_k127_3064211_1 264732.Moth_1264 5.872e-25 119.0 2C55S@1|root,344D1@2|Bacteria,1W07V@1239|Firmicutes,253Q0@186801|Clostridia,42IQU@68295|Thermoanaerobacterales 186801|Clostridia - - - - - - - - - - - - - - - YYD2_k127_3064211_0 321332.CYB_1515 7.638e-44 177.0 COG0457@1|root,COG0515@1|root,COG0457@2|Bacteria,COG0515@2|Bacteria,1FZWQ@1117|Cyanobacteria,1GZAT@1129|Synechococcus 1117|Cyanobacteria KLT Protein kinase domain - - 2.7.11.1 ko:K08884 - - - - ko00000,ko01000,ko01001 - - - Pkinase,TPR_1,TPR_11,TPR_16,TPR_2,TPR_6,TPR_8 YYD2_k127_3064211_2 864702.OsccyDRAFT_0772 3.848e-23 116.0 COG3170@1|root,COG3170@2|Bacteria,1G0I0@1117|Cyanobacteria,1H8GA@1150|Oscillatoriales 1117|Cyanobacteria NU Bacterial cellulose synthase subunit - - - ko:K20541 - - - - ko00000,ko02000 4.D.3.1.6 - - BcsB YYD2_k127_30701_3 525903.Taci_1580 2.319e-53 192.0 COG1528@1|root,COG1528@2|Bacteria,3TB3G@508458|Synergistetes 508458|Synergistetes P Iron-storage protein - - 1.16.3.2 ko:K02217 - - - - ko00000,ko01000 - - - Ferritin YYD2_k127_30701_5 1123508.JH636440_gene2561 6.668e-14 80.0 COG0681@1|root,COG0681@2|Bacteria,2J14X@203682|Planctomycetes 203682|Planctomycetes U Belongs to the peptidase S26 family - - - - - - - - - - - - - YYD2_k127_30701_2 1117314.PCIT_10089 2.909e-55 198.0 COG3502@1|root,COG3542@1|root,COG3502@2|Bacteria,COG3542@2|Bacteria,1QZ7P@1224|Proteobacteria,1SDPJ@1236|Gammaproteobacteria,2Q4TD@267888|Pseudoalteromonadaceae 1236|Gammaproteobacteria S Cupin superfamily (DUF985) - - - ko:K09705 - - - - ko00000 - - - Cupin_5,DUF952 YYD2_k127_30701_6 102125.Xen7305DRAFT_00021230 0.0008033 50.0 COG0688@1|root,COG0688@2|Bacteria,1GFTF@1117|Cyanobacteria 1117|Cyanobacteria I Phosphatidylserine decarboxylase - - - - - - - - - - - - PS_Dcarbxylase YYD2_k127_30701_1 1147.D082_25660 9.71e-60 225.0 COG2931@1|root,COG3204@1|root,COG3210@1|root,COG5184@1|root,COG2931@2|Bacteria,COG3204@2|Bacteria,COG3210@2|Bacteria,COG5184@2|Bacteria,1G5KY@1117|Cyanobacteria,1H6DE@1142|Synechocystis 1117|Cyanobacteria QU Cadherin repeats. - - - - - - - - - - - - Cadherin,Calx-beta,HemolysinCabind,VCBS YYD2_k127_30701_0 926569.ANT_22970 8.303e-74 253.0 COG0531@1|root,COG0531@2|Bacteria,2G5ZF@200795|Chloroflexi 200795|Chloroflexi E Amino acid permease - - - - - - - - - - - - AA_permease_2 YYD2_k127_3083371_2 760568.Desku_3215 5.523e-35 144.0 COG1233@1|root,COG1233@2|Bacteria,1TS4A@1239|Firmicutes,249K1@186801|Clostridia,2633J@186807|Peptococcaceae 186801|Clostridia Q amine oxidase - - - - - - - - - - - - Amino_oxidase,NAD_binding_8 YYD2_k127_3083371_1 875328.JDM601_1645 1.63e-68 238.0 COG2020@1|root,COG2020@2|Bacteria,2IIDW@201174|Actinobacteria 201174|Actinobacteria O Phospholipid methyltransferase - - - - - - - - - - - - PEMT YYD2_k127_3083371_0 610130.Closa_3208 4.644e-87 299.0 COG0613@1|root,COG0613@2|Bacteria,1V32Z@1239|Firmicutes,25NXN@186801|Clostridia,2217A@1506553|Lachnoclostridium 186801|Clostridia S DNA polymerase alpha chain like domain - - - - - - - - - - - - - YYD2_k127_3085230_0 522772.Dacet_0784 1.533e-169 560.0 COG3005@1|root,COG3005@2|Bacteria 2|Bacteria C denitrification pathway - - - - - - - - - - - - Paired_CXXCH_1 YYD2_k127_3085230_1 697282.Mettu_0616 1.516e-147 478.0 COG0446@1|root,COG0446@2|Bacteria,1NR3M@1224|Proteobacteria,1RN6P@1236|Gammaproteobacteria,1XEW5@135618|Methylococcales 135618|Methylococcales C Apoptosis-inducing factor, mitochondrion-associated, C-term - - - - - - - - - - - - AIF_C,Pyr_redox_2 YYD2_k127_3085230_2 1521187.JPIM01000003_gene3024 3.651e-81 282.0 COG1609@1|root,COG1609@2|Bacteria,2G6DT@200795|Chloroflexi,376ZH@32061|Chloroflexia 32061|Chloroflexia K periplasmic binding protein LacI transcriptional regulator - - - ko:K02529 - - - - ko00000,ko03000 - - - LacI,Peripla_BP_3 YYD2_k127_3085230_3 857293.CAAU_0151 3.576e-69 241.0 COG1653@1|root,COG1653@2|Bacteria,1TRPJ@1239|Firmicutes,24872@186801|Clostridia,36F95@31979|Clostridiaceae 186801|Clostridia G solute-binding protein - - - - - - - - - - - - SBP_bac_8 YYD2_k127_3090932_0 926569.ANT_04130 1.198e-124 409.0 COG2203@1|root,COG4585@1|root,COG2203@2|Bacteria,COG4585@2|Bacteria,2G8F9@200795|Chloroflexi 200795|Chloroflexi T histidine kinase, dimerisation and phosphoacceptor region - - - - - - - - - - - - GAF_2,GAF_3,HATPase_c,HisKA_3 YYD2_k127_3090932_3 671143.DAMO_1522 7.437e-58 211.0 COG2267@1|root,COG2267@2|Bacteria,2NPTF@2323|unclassified Bacteria 2|Bacteria I Alpha/beta hydrolase family mhpC - - - - - - - - - - - Abhydrolase_1,Abhydrolase_4,Abhydrolase_6 YYD2_k127_3090932_2 926569.ANT_04120 8.323e-75 256.0 COG0127@1|root,COG0127@2|Bacteria,2G6GK@200795|Chloroflexi 200795|Chloroflexi F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions - - 3.6.1.66 ko:K02428 ko00230,map00230 - R00426,R00720,R01855,R02100,R02720,R03531 RC00002 ko00000,ko00001,ko01000 - - - Ham1p_like YYD2_k127_3090932_1 926569.ANT_23050 9.291e-110 366.0 COG1600@1|root,COG1600@2|Bacteria,2G6A0@200795|Chloroflexi 200795|Chloroflexi C 4Fe-4S double cluster binding domain - - 1.17.99.6 ko:K18979 - - - - ko00000,ko01000,ko03016 - - - DUF1730,Dehalogenase,Fer4_16,HEAT_2 YYD2_k127_3090932_4 926569.ANT_15080 2.094e-21 102.0 COG1572@1|root,COG1572@2|Bacteria,2G9M8@200795|Chloroflexi 2|Bacteria S Ig-like domain from next to BRCA1 gene - - - - - - - - - - - - DUF11,N_BRCA1_IG YYD2_k127_3092121_4 614083.AWQR01000009_gene652 2.152e-38 149.0 COG2199@1|root,COG3706@2|Bacteria,1NECV@1224|Proteobacteria,2VNH2@28216|Betaproteobacteria,4ACVV@80864|Comamonadaceae 28216|Betaproteobacteria T Diguanylate cyclase - - - - - - - - - - - - GGDEF,MASE2 YYD2_k127_3092121_0 1521187.JPIM01000134_gene1347 7.93e-127 412.0 COG2041@1|root,COG2041@2|Bacteria,2G618@200795|Chloroflexi,375BB@32061|Chloroflexia 32061|Chloroflexia C Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met- O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide msrP - - ko:K07147 - - - - ko00000,ko01000 - - - Oxidored_molyb YYD2_k127_3092121_3 926569.ANT_11150 1.373e-50 188.0 COG2717@1|root,COG2717@2|Bacteria,2G6WP@200795|Chloroflexi 200795|Chloroflexi C Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met- O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain msrQ - - ko:K17247 - - - - ko00000 - - - Ferric_reduct YYD2_k127_3092121_7 1321778.HMPREF1982_02132 1.182e-13 74.0 2AFI1@1|root,315IM@2|Bacteria,1UUJJ@1239|Firmicutes,256YF@186801|Clostridia 186801|Clostridia - - - - - - - - - - - - - - - YYD2_k127_3092121_2 926569.ANT_28370 2.202e-53 197.0 COG1651@1|root,COG1651@2|Bacteria,2G769@200795|Chloroflexi 200795|Chloroflexi O PFAM DSBA oxidoreductase - - - - - - - - - - - - Thioredoxin_4 YYD2_k127_3092121_1 926569.ANT_28360 6.463e-91 304.0 COG1428@1|root,COG1428@2|Bacteria,2G8PM@200795|Chloroflexi 200795|Chloroflexi F PFAM deoxynucleoside kinase - - - - - - - - - - - - dNK YYD2_k127_3092121_6 1385510.N781_08120 1.143e-13 85.0 COG1502@1|root,COG1502@2|Bacteria,1VSU5@1239|Firmicutes,4HTP4@91061|Bacilli,2Y9A5@289201|Pontibacillus 91061|Bacilli I Lamin Tail Domain - - - - - - - - - - - - LTD,PLDc_2 YYD2_k127_3092121_5 765869.BDW_08110 7.453e-22 112.0 COG5184@1|root,COG5184@2|Bacteria,1QX3H@1224|Proteobacteria,42QVK@68525|delta/epsilon subdivisions,2MTTS@213481|Bdellovibrionales,2WN77@28221|Deltaproteobacteria 213481|Bdellovibrionales DZ cell wall surface anchor family protein - - - - - - - - - - - - Calx-beta,RCC1_2 YYD2_k127_3120004_0 926569.ANT_25850 4.615e-102 341.0 COG0265@1|root,COG0265@2|Bacteria,2G6KG@200795|Chloroflexi 200795|Chloroflexi O PFAM peptidase S1 and S6, chymotrypsin Hap - - 3.4.21.107 ko:K04771 ko01503,ko02020,map01503,map02020 M00728 - - ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 - - - PDZ_2,Trypsin_2 YYD2_k127_3120004_1 926569.ANT_25840 7.717e-96 322.0 COG0484@1|root,COG0484@2|Bacteria,2G61V@200795|Chloroflexi 200795|Chloroflexi O Heat shock protein DnaJ domain protein - - - ko:K05516 - - - - ko00000,ko03036,ko03110 - - - DnaJ,DnaJ_C YYD2_k127_3120004_2 1333856.L686_00165 4.591e-19 89.0 COG1611@1|root,COG1611@2|Bacteria,1RD59@1224|Proteobacteria,1S4C3@1236|Gammaproteobacteria,1Z0DV@136846|Pseudomonas stutzeri group 1236|Gammaproteobacteria S Belongs to the LOG family yvdD - 3.2.2.10 ko:K06966 ko00230,ko00240,map00230,map00240 - R00182,R00510 RC00063,RC00318 ko00000,ko00001,ko01000 - - - Lysine_decarbox YYD2_k127_3151209_1 552811.Dehly_1213 8.061e-61 226.0 COG2211@1|root,COG2211@2|Bacteria,2G8SN@200795|Chloroflexi 200795|Chloroflexi G PFAM major facilitator superfamily MFS_1 - - - - - - - - - - - - - YYD2_k127_3151209_0 309801.trd_0274 1.688e-71 256.0 COG5438@1|root,COG5438@2|Bacteria 2|Bacteria S YibE/F-like protein yibE - - - - - - - - - - - YibE_F YYD2_k127_3151209_2 926569.ANT_13140 4.778e-51 187.0 COG1595@1|root,COG1595@2|Bacteria,2G6T5@200795|Chloroflexi 200795|Chloroflexi K PFAM sigma-70 region 2 domain protein - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 YYD2_k127_3151209_3 926569.ANT_13160 2.207e-24 117.0 COG1664@1|root,COG1664@2|Bacteria,2G7EZ@200795|Chloroflexi 200795|Chloroflexi M Polymer-forming cytoskeletal - - - - - - - - - - - - Bactofilin YYD2_k127_3172156_1 926569.ANT_00050 3.352e-176 562.0 COG1249@1|root,COG1249@2|Bacteria,2G5MR@200795|Chloroflexi 200795|Chloroflexi C Pyridine nucleotide-disulphide oxidoreductase dimerisation region lpd - 1.8.1.4 ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00036,M00307,M00532 R00209,R01221,R01698,R03815,R07618,R08549 RC00004,RC00022,RC00583,RC02742,RC02833,RC02834 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 - - - Pyr_redox_2,Pyr_redox_dim YYD2_k127_3172156_5 1121405.dsmv_0975 5.392e-15 77.0 COG0236@1|root,COG0236@2|Bacteria,1NHIC@1224|Proteobacteria,42X2R@68525|delta/epsilon subdivisions,2X4Y2@28221|Deltaproteobacteria,2MP8D@213118|Desulfobacterales 28221|Deltaproteobacteria IQ Phosphopantetheine attachment site - - - - - - - - - - - - PP-binding YYD2_k127_3172156_4 926550.CLDAP_19210 5.103e-122 406.0 COG0508@1|root,COG0508@2|Bacteria,2G619@200795|Chloroflexi 200795|Chloroflexi C Catalytic domain of components of various dehydrogenase complexes - - 2.3.1.12 ko:K00627 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200 M00307 R00209,R02569 RC00004,RC02742,RC02857 br01601,ko00000,ko00001,ko00002,ko01000 - - - 2-oxoacid_dh,Biotin_lipoyl,E3_binding YYD2_k127_3172156_2 177439.DPPB39 9.506e-141 454.0 COG0022@1|root,COG0022@2|Bacteria,1R8KB@1224|Proteobacteria,42MBM@68525|delta/epsilon subdivisions,2WJKG@28221|Deltaproteobacteria,2MMK7@213118|Desulfobacterales 28221|Deltaproteobacteria C Transketolase, pyrimidine binding domain pdhB - 1.2.4.1 ko:K00162 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00307 R00014,R00209,R01699,R03270 RC00004,RC00027,RC00627,RC02742,RC02744,RC02882 br01601,ko00000,ko00001,ko00002,ko01000 - - iAF987.Gmet_2753 Transket_pyr,Transketolase_C YYD2_k127_3172156_3 926550.CLDAP_19200 2.924e-124 407.0 COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,2G60F@200795|Chloroflexi 200795|Chloroflexi C PFAM Transketolase central region - - 1.2.4.1,1.2.4.4 ko:K00162,ko:K11381,ko:K21417 ko00010,ko00020,ko00280,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00280,map00620,map00640,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00036,M00307 R00014,R00209,R01699,R03270,R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997 RC00004,RC00027,RC00627,RC02742,RC02743,RC02744,RC02882,RC02883,RC02949,RC02953 br01601,ko00000,ko00001,ko00002,ko01000 - - - Transket_pyr,Transketolase_C YYD2_k127_3172156_0 926550.CLDAP_19190 5.749e-214 668.0 COG0365@1|root,COG0365@2|Bacteria,2G5KE@200795|Chloroflexi 2|Bacteria I Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA acsA - 6.2.1.1 ko:K01895 ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200 M00357 R00235,R00236,R00316,R00926,R01354 RC00004,RC00012,RC00043,RC00070,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000,ko01004 - - - ACAS_N,AMP-binding,AMP-binding_C YYD2_k127_3192163_1 1210884.HG799466_gene12341 4.386e-23 111.0 COG1404@1|root,COG3210@1|root,COG5276@1|root,COG1404@2|Bacteria,COG3210@2|Bacteria,COG5276@2|Bacteria,2J30Y@203682|Planctomycetes 203682|Planctomycetes U Extracellular nuclease - - - - - - - - - - - - Chlam_PMP YYD2_k127_3192163_2 469381.Dpep_1037 9.809e-15 74.0 COG0286@1|root,COG0286@2|Bacteria,3TADF@508458|Synergistetes 508458|Synergistetes L HsdM N-terminal domain - - 2.1.1.72 ko:K03427 - - - - ko00000,ko01000,ko02048 - - - HsdM_N,N6_Mtase YYD2_k127_3192163_0 65393.PCC7424_4808 4.302e-60 210.0 COG0614@1|root,COG0614@2|Bacteria,1GJEH@1117|Cyanobacteria,3KKIH@43988|Cyanothece 1117|Cyanobacteria P PD-(D/E)XK nuclease superfamily - - - - - - - - - - - - PDDEXK_3 YYD2_k127_3195605_2 580340.Tlie_0498 4.885e-10 66.0 COG1893@1|root,COG1893@2|Bacteria,3TAIK@508458|Synergistetes 508458|Synergistetes H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - 1.1.1.169 ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R02472 RC00726 ko00000,ko00001,ko00002,ko01000 - - - ApbA,ApbA_C YYD2_k127_3195605_0 477974.Daud_0100 4.023e-105 349.0 COG0413@1|root,COG0413@2|Bacteria,1TPZA@1239|Firmicutes,248RR@186801|Clostridia,260CY@186807|Peptococcaceae 186801|Clostridia H Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate panB - 2.1.2.11 ko:K00606 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R01226 RC00022,RC00200 ko00000,ko00001,ko00002,ko01000 - - - Pantoate_transf YYD2_k127_3195605_3 1121091.AUMP01000002_gene2144 0.0003547 46.0 COG4980@1|root,COG4980@2|Bacteria 2|Bacteria D gas vesicle protein XK27_07760 - - - - - - - - - - - YtxH YYD2_k127_3195605_1 926569.ANT_23140 4.911e-53 194.0 COG0438@1|root,COG0438@2|Bacteria 2|Bacteria M transferase activity, transferring glycosyl groups - - - - - - - - - - - - Glyco_trans_1_4,Glyco_trans_4_2,Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1 YYD2_k127_3213857_3 926569.ANT_23460 4.926e-164 524.0 COG0206@1|root,COG0206@2|Bacteria,2G5V2@200795|Chloroflexi 200795|Chloroflexi D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity - - - ko:K03531 ko04112,map04112 - - - ko00000,ko00001,ko02048,ko03036,ko04812 - - - FtsZ_C,Tubulin YYD2_k127_3213857_1 926569.ANT_23450 2.815e-171 549.0 COG0849@1|root,COG0849@2|Bacteria,2G5V5@200795|Chloroflexi 200795|Chloroflexi D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring ftsA - - ko:K03590 ko04112,map04112 - - - ko00000,ko00001,ko03036,ko04812 - - - FtsA,SHS2_FTSA YYD2_k127_3213857_11 1410634.JHVD01000001_gene1509 2.022e-09 68.0 COG1589@1|root,COG1589@2|Bacteria,2H4A4@201174|Actinobacteria,4DRPK@85009|Propionibacteriales 201174|Actinobacteria D Cell division protein FtsQ ftsQ GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0071944 - ko:K03589 ko04112,map04112 - - - ko00000,ko00001,ko03036 - - - FtsQ,POTRA_1 YYD2_k127_3213857_4 926569.ANT_23430 5.771e-155 496.0 COG1181@1|root,COG1181@2|Bacteria,2G5RS@200795|Chloroflexi 200795|Chloroflexi F Belongs to the D-alanine--D-alanine ligase family ddl - 6.3.2.4 ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 - R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Dala_Dala_lig_C,Dala_Dala_lig_N YYD2_k127_3213857_8 926569.ANT_23420 5.28e-105 349.0 COG0812@1|root,COG0812@2|Bacteria,2G6H3@200795|Chloroflexi 200795|Chloroflexi M Cell wall formation murB - 1.3.1.98 ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 - R03191,R03192 RC02639 ko00000,ko00001,ko01000,ko01011 - - - FAD_binding_4,MurB_C YYD2_k127_3213857_6 926569.ANT_23400 8.536e-140 458.0 COG0773@1|root,COG0773@2|Bacteria,2G5J4@200795|Chloroflexi 200795|Chloroflexi M Belongs to the MurCDEF family murC - 6.3.2.8 ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 - R03193 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M YYD2_k127_3213857_7 926569.ANT_23380 1.816e-126 414.0 COG0707@1|root,COG0707@2|Bacteria,2G6EH@200795|Chloroflexi 200795|Chloroflexi M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) murG - 2.4.1.227 ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 - R05032,R05662 RC00005,RC00049 ko00000,ko00001,ko01000,ko01011 - GT28 - Glyco_tran_28_C,Glyco_transf_28 YYD2_k127_3213857_9 1304880.JAGB01000002_gene1518 1.017e-59 222.0 COG0772@1|root,COG0772@2|Bacteria,1TPT7@1239|Firmicutes,24894@186801|Clostridia 186801|Clostridia D Belongs to the SEDS family ftsW - - ko:K03588 ko04112,map04112 - - - ko00000,ko00001,ko02000,ko03036 2.A.103.1 - - FTSW_RODA_SPOVE YYD2_k127_3213857_2 926569.ANT_23360 2.882e-167 539.0 COG0771@1|root,COG0771@2|Bacteria,2G5VE@200795|Chloroflexi 200795|Chloroflexi M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) murD - 6.3.2.9 ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 - R02783 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase_C,Mur_ligase_M YYD2_k127_3213857_5 926569.ANT_23350 1.882e-143 463.0 COG0472@1|root,COG0472@2|Bacteria,2G5TJ@200795|Chloroflexi 200795|Chloroflexi M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan mraY - 2.7.8.13 ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 - R05629,R05630 RC00002,RC02753 ko00000,ko00001,ko01000,ko01011 9.B.146 - - Glycos_transf_4,MraY_sig1 YYD2_k127_3213857_0 926569.ANT_23340 9.644e-193 611.0 COG0770@1|root,COG0770@2|Bacteria,2G5PN@200795|Chloroflexi 200795|Chloroflexi M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein murF - 6.3.2.10 ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 - R04573,R04617 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M YYD2_k127_3237407_0 1295642.H839_04589 3.887e-120 407.0 COG1198@1|root,COG1198@2|Bacteria,1TNYB@1239|Firmicutes,4H9WW@91061|Bacilli,1WEMW@129337|Geobacillus 91061|Bacilli L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA priA GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 - ko:K04066 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C,ResIII YYD2_k127_3237407_1 926569.ANT_07440 1.644e-89 306.0 COG1355@1|root,COG1355@2|Bacteria,2G6V0@200795|Chloroflexi 200795|Chloroflexi S Belongs to the MEMO1 family - - - ko:K06990 - - - - ko00000,ko04812 - - - AMMECR1,Memo YYD2_k127_3237407_3 926569.ANT_29480 3.103e-55 197.0 COG1051@1|root,COG1051@2|Bacteria,2G77J@200795|Chloroflexi 200795|Chloroflexi F Nudix hydrolase - - - - - - - - - - - - NUDIX YYD2_k127_3237407_5 926569.ANT_29490 1.084e-12 76.0 COG5662@1|root,COG5662@2|Bacteria,2G9S9@200795|Chloroflexi 200795|Chloroflexi K AntiSigma factor - - - - - - - - - - - - zf-HC2 YYD2_k127_3237407_2 926569.ANT_29500 3.33e-70 244.0 COG1595@1|root,COG1595@2|Bacteria,2G6MG@200795|Chloroflexi 200795|Chloroflexi K sigma-70 region 2 domain protein - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 YYD2_k127_3237407_4 1410653.JHVC01000012_gene2337 5.274e-25 112.0 COG1313@1|root,COG1313@2|Bacteria,1TRUV@1239|Firmicutes,247VW@186801|Clostridia,36DEH@31979|Clostridiaceae 186801|Clostridia C Radical SAM domain protein PflX - 1.97.1.4 ko:K04070 - - - - ko00000,ko01000 - - - Fer4_12,Fer4_14,Radical_SAM YYD2_k127_3238978_0 357808.RoseRS_4272 4.812e-111 378.0 COG2931@1|root,COG3210@1|root,COG2931@2|Bacteria,COG3210@2|Bacteria,2G88I@200795|Chloroflexi,3780V@32061|Chloroflexia 32061|Chloroflexia U Parallel beta-helix repeats - - - - - - - - - - - - - YYD2_k127_3238978_1 1499967.BAYZ01000159_gene478 3.646e-25 115.0 COG1011@1|root,COG1011@2|Bacteria,2NQ1K@2323|unclassified Bacteria 2|Bacteria S Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - ko:K07025 - - - - ko00000 - - - HAD_2 YYD2_k127_3255430_4 926569.ANT_22460 3.529e-74 257.0 COG0571@1|root,COG0571@2|Bacteria,2G6PD@200795|Chloroflexi 200795|Chloroflexi J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism rnc GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 ko:K03685 ko03008,ko05205,map03008,map05205 - - - ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 - - - Ribonucleas_3_3,dsrm YYD2_k127_3255430_0 926569.ANT_22450 7e-323 1026.0 COG1196@1|root,COG1196@2|Bacteria,2G64A@200795|Chloroflexi 200795|Chloroflexi D Required for chromosome condensation and partitioning smc - - ko:K03529 - - - - ko00000,ko03036 - - - SMC_N,SMC_hinge YYD2_k127_3255430_2 1242864.D187_000739 1.215e-109 362.0 COG1940@1|root,COG1940@2|Bacteria,1R7YN@1224|Proteobacteria,42QSZ@68525|delta/epsilon subdivisions,2WN50@28221|Deltaproteobacteria 28221|Deltaproteobacteria GK ROK family - - 2.7.1.4 ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 - R00760,R00867,R03920 RC00002,RC00017 ko00000,ko00001,ko01000 - - - ROK YYD2_k127_3255430_1 1035308.AQYY01000001_gene1943 3.449e-315 979.0 COG0365@1|root,COG0365@2|Bacteria,1TQTI@1239|Firmicutes,24BRX@186801|Clostridia,260H8@186807|Peptococcaceae 186801|Clostridia H Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA acsA - 6.2.1.1 ko:K01895 ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200 M00357 R00235,R00236,R00316,R00926,R01354 RC00004,RC00012,RC00043,RC00070,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000,ko01004 - - - ACAS_N,AMP-binding,AMP-binding_C YYD2_k127_3255430_3 926569.ANT_22440 8.424e-85 299.0 COG0760@1|root,COG0760@2|Bacteria,2G6RV@200795|Chloroflexi 200795|Chloroflexi O PFAM PpiC-type peptidyl-prolyl cis-trans isomerase - - - - - - - - - - - - Rotamase,Rotamase_3,SurA_N_3 YYD2_k127_3255430_5 926569.ANT_22430 1.147e-27 114.0 COG0238@1|root,COG0238@2|Bacteria,2G756@200795|Chloroflexi 200795|Chloroflexi J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit rpsR - - ko:K02963 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S18 YYD2_k127_3255430_6 926569.ANT_22420 6.285e-21 93.0 COG0629@1|root,COG0629@2|Bacteria,2G6YE@200795|Chloroflexi 200795|Chloroflexi L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism ssb - - ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 - - - ko00000,ko00001,ko03029,ko03032,ko03400 - - - SSB YYD2_k127_3259385_1 926569.ANT_17820 1.809e-131 440.0 COG1894@1|root,COG1894@2|Bacteria,2G5K9@200795|Chloroflexi 200795|Chloroflexi C PFAM Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit - - 1.6.5.3 ko:K00335,ko:K05587 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - 2Fe-2S_thioredx,Complex1_51K,Fer4,NADH_4Fe-4S,SLBB YYD2_k127_3259385_3 459495.SPLC1_S050110 1.08e-20 98.0 COG1357@1|root,COG1357@2|Bacteria,1G5FM@1117|Cyanobacteria,1HA1A@1150|Oscillatoriales 1117|Cyanobacteria S Pentapeptide repeats (9 copies) - - - - - - - - - - - - Pentapeptide YYD2_k127_3259385_0 926569.ANT_29920 1.525e-136 443.0 COG3383@1|root,COG3383@2|Bacteria,2GBH3@200795|Chloroflexi 200795|Chloroflexi C Molybdopterin oxidoreductase Fe4S4 domain - - 1.17.1.9 ko:K00123 ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200 - R00519 RC02796 ko00000,ko00001,ko01000 - - - Fer2_4,Fer4,Molybdop_Fe4S4,Molybdopterin,Molydop_binding,NADH-G_4Fe-4S_3 YYD2_k127_3259385_2 926569.ANT_29920 2.624e-110 361.0 COG3383@1|root,COG3383@2|Bacteria,2GBH3@200795|Chloroflexi 200795|Chloroflexi C Molybdopterin oxidoreductase Fe4S4 domain - - 1.17.1.9 ko:K00123 ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200 - R00519 RC02796 ko00000,ko00001,ko01000 - - - Fer2_4,Fer4,Molybdop_Fe4S4,Molybdopterin,Molydop_binding,NADH-G_4Fe-4S_3 YYD2_k127_3300113_1 1128421.JAGA01000003_gene3696 3.059e-149 482.0 COG1164@1|root,COG1164@2|Bacteria,2NNVV@2323|unclassified Bacteria 2|Bacteria E Oligopeptidase F - - - ko:K08602 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M3,Peptidase_M3_N YYD2_k127_3300113_0 883.DvMF_1147 2.969e-199 632.0 COG1620@1|root,COG1620@2|Bacteria,1MV13@1224|Proteobacteria,42NEP@68525|delta/epsilon subdivisions,2WPFQ@28221|Deltaproteobacteria 28221|Deltaproteobacteria C L-lactate permease - - - ko:K03303 - - - - ko00000,ko02000 2.A.14 - - Lactate_perm YYD2_k127_3300113_2 926550.CLDAP_36710 1.725e-27 114.0 COG0640@1|root,COG0640@2|Bacteria 2|Bacteria K DNA-binding transcription factor activity arsR - - ko:K03892 - - - - ko00000,ko03000 - - - HTH_20,HTH_5 YYD2_k127_3302579_0 926569.ANT_10160 3.021e-86 288.0 COG0094@1|root,COG0094@2|Bacteria,2G6C6@200795|Chloroflexi 200795|Chloroflexi J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits rplE GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02931 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L5,Ribosomal_L5_C YYD2_k127_3302579_2 926569.ANT_10150 7.564e-42 156.0 COG0198@1|root,COG0198@2|Bacteria,2G750@200795|Chloroflexi 200795|Chloroflexi J One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit rplX GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02895 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - KOW,ribosomal_L24 YYD2_k127_3302579_1 926569.ANT_10140 2.141e-59 207.0 COG0093@1|root,COG0093@2|Bacteria,2G6MZ@200795|Chloroflexi 200795|Chloroflexi J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome rplN GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - ko:K02874 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L14 YYD2_k127_3302579_3 926569.ANT_10130 1.64e-31 126.0 COG0186@1|root,COG0186@2|Bacteria,2G722@200795|Chloroflexi 200795|Chloroflexi J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA rpsQ - - ko:K02961 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S17 YYD2_k127_3317398_4 1232410.KI421417_gene2725 3.048e-59 215.0 COG1024@1|root,COG1250@1|root,COG1024@2|Bacteria,COG1250@2|Bacteria,1MU9P@1224|Proteobacteria,42MI5@68525|delta/epsilon subdivisions,2WITQ@28221|Deltaproteobacteria,43UCC@69541|Desulfuromonadales 28221|Deltaproteobacteria I 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain - - 1.1.1.35 ko:K07516 ko00071,ko00362,ko00650,ko01100,ko01120,ko01200,ko01212,map00071,map00362,map00650,map01100,map01120,map01200,map01212 M00087 R01975,R04737,R04739,R04741,R04743,R04745,R04748,R05305 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000 - - - 3HCDH,3HCDH_N,ECH_1,ECH_2 YYD2_k127_3317398_6 926569.ANT_00160 6.429e-42 161.0 28U8H@1|root,2ZGE4@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - YYD2_k127_3317398_7 909663.KI867150_gene1270 5.022e-15 80.0 COG5513@1|root,COG5513@2|Bacteria,1Q83W@1224|Proteobacteria,42XPU@68525|delta/epsilon subdivisions,2WT8K@28221|Deltaproteobacteria,2MQR1@213462|Syntrophobacterales 28221|Deltaproteobacteria S Chagasin family peptidase inhibitor I42 - - - ko:K14475 ko05143,map05143 - - - ko00000,ko00001 - - - Inhibitor_I42 YYD2_k127_3317398_5 1280390.CBQR020000164_gene4381 1.95e-57 215.0 COG1680@1|root,COG1680@2|Bacteria,1TR9E@1239|Firmicutes,4HER8@91061|Bacilli,26S99@186822|Paenibacillaceae 91061|Bacilli V Beta-lactamase class C and other penicillin binding M1-750 - - - - - - - - - - - Beta-lactamase YYD2_k127_3317398_3 765420.OSCT_0965 3.677e-60 232.0 28M0D@1|root,2ZAFE@2|Bacteria,2G9HQ@200795|Chloroflexi 200795|Chloroflexi S Putative ATP-binding cassette - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran_2 YYD2_k127_3317398_2 756499.Desde_2038 2.788e-87 295.0 COG1131@1|root,COG1131@2|Bacteria,1TQIH@1239|Firmicutes,248WG@186801|Clostridia,261DY@186807|Peptococcaceae 186801|Clostridia V ABC-type multidrug transport system ATPase - - - ko:K01990,ko:K16907 ko02010,map02010 M00224,M00254 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1 - - ABC_tran YYD2_k127_3317398_1 279714.FuraDRAFT_1495 4.218e-139 454.0 COG2072@1|root,COG2072@2|Bacteria,1MWPJ@1224|Proteobacteria,2VKYW@28216|Betaproteobacteria 28216|Betaproteobacteria P fad dependent oxidoreductase - - - ko:K07222 - - - - ko00000 - - - Pyr_redox_3 YYD2_k127_3317398_0 522306.CAP2UW1_1217 2.868e-191 618.0 COG0784@1|root,COG3290@1|root,COG3829@1|root,COG5001@1|root,COG0784@2|Bacteria,COG3290@2|Bacteria,COG3829@2|Bacteria,COG5001@2|Bacteria,1MU2C@1224|Proteobacteria,2VJMN@28216|Betaproteobacteria 28216|Betaproteobacteria T Diguanylate cyclase - - - ko:K03320 - - - - ko00000,ko02000 1.A.11 - - DUF2222,EAL,GGDEF,HAMP,PAS,PAS_3,PAS_4,PAS_9 YYD2_k127_3338160_8 926569.ANT_30110 2.978e-05 52.0 COG0860@1|root,COG0860@2|Bacteria,2G7IE@200795|Chloroflexi 200795|Chloroflexi M PFAM cell wall hydrolase autolysin - - 3.5.1.28 ko:K01448 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 - - - Amidase_3 YYD2_k127_3338160_6 985053.VMUT_0453 6.517e-28 120.0 COG1853@1|root,arCOG02017@2157|Archaea,2XRAH@28889|Crenarchaeota 28889|Crenarchaeota S PFAM flavin reductase - - - - - - - - - - - - Flavin_Reduct YYD2_k127_3338160_5 926569.ANT_04450 7.857e-64 224.0 COG2078@1|root,COG2078@2|Bacteria 2|Bacteria S ferrous iron binding - - - ko:K06990,ko:K09141 - - - - ko00000,ko04812 - - - AMMECR1,Memo YYD2_k127_3338160_3 926569.ANT_03580 1.055e-96 338.0 COG0457@1|root,COG0457@2|Bacteria 926569.ANT_03580|- S peptidyl-tyrosine sulfation - - - - - - - - - - - - - YYD2_k127_3338160_1 1382306.JNIM01000001_gene1201 6.342e-118 391.0 COG0183@1|root,COG0183@2|Bacteria 2|Bacteria I Belongs to the thiolase family - - 2.3.1.16 ko:K00632 ko00071,ko00280,ko00281,ko00362,ko00592,ko00642,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00362,map00592,map00642,map01100,map01110,map01120,map01130,map01212 M00087,M00113 R00829,R00927,R01177,R03778,R03858,R03991,R04546,R04742,R04747,R05506,R05586,R07891,R07895,R07899,R08091,R08095 RC00004,RC00326,RC00405,RC01702,RC02728,RC02898,RC02955 ko00000,ko00001,ko00002,ko01000 - - - Thiolase_C,Thiolase_N YYD2_k127_3338160_7 1246995.AFR_25920 7.902e-07 62.0 COG5001@1|root,COG5001@2|Bacteria,2GIZF@201174|Actinobacteria,4DH3D@85008|Micromonosporales 201174|Actinobacteria T Signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - 2.7.7.65 ko:K21023 ko02025,map02025 - - - ko00000,ko00001,ko01000 - - - EAL,GGDEF YYD2_k127_3338160_0 1242864.D187_008661 1.354e-129 450.0 COG0308@1|root,COG0308@2|Bacteria,1MUCI@1224|Proteobacteria 1224|Proteobacteria E aminopeptidase N pepN - - - - - - - - - - - Leuk-A4-hydro_C,Peptidase_M1 YYD2_k127_3338160_2 926569.ANT_27540 7.144e-105 376.0 COG0460@1|root,COG0460@2|Bacteria,2G6PU@200795|Chloroflexi 200795|Chloroflexi E homoserine dehydrogenase metM - 1.1.1.3 ko:K00003 ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230 M00017,M00018 R01773,R01775 RC00087 ko00000,ko00001,ko00002,ko01000 - - - ACT,Homoserine_dh,NAD_binding_3 YYD2_k127_3338160_4 926569.ANT_27550 1.161e-75 264.0 COG5032@1|root,COG5032@2|Bacteria,2G6FZ@200795|Chloroflexi 200795|Chloroflexi BDLTU phosphatidylinositol kinase activity - - - - - - - - - - - - PI3_PI4_kinase YYD2_k127_3383519_1 324602.Caur_0496 1.157e-93 318.0 COG2182@1|root,COG2182@2|Bacteria,2G74H@200795|Chloroflexi,376QQ@32061|Chloroflexia 32061|Chloroflexia G PFAM extracellular solute-binding protein family 1 - - - ko:K15770 ko02010,map02010 M00491 - - ko00000,ko00001,ko00002,ko02000 3.A.1.1.16,3.A.1.1.2 - - SBP_bac_8 YYD2_k127_3383519_0 324602.Caur_0495 2.382e-110 366.0 COG1175@1|root,COG1175@2|Bacteria,2G8NE@200795|Chloroflexi,376MA@32061|Chloroflexia 32061|Chloroflexia P PFAM binding-protein-dependent transport systems inner membrane component - - - ko:K15771 ko02010,map02010 M00491 - - ko00000,ko00001,ko00002,ko02000 3.A.1.1.16,3.A.1.1.2 - - BPD_transp_1 YYD2_k127_3383519_2 324602.Caur_0494 9.093e-28 119.0 COG0395@1|root,COG3833@1|root,COG0395@2|Bacteria,COG3833@2|Bacteria,2G8IJ@200795|Chloroflexi,3772H@32061|Chloroflexia 32061|Chloroflexia P PFAM binding-protein-dependent transport systems inner membrane component - - - ko:K15772 ko02010,map02010 M00491 - - ko00000,ko00001,ko00002,ko02000 3.A.1.1.16,3.A.1.1.2 - - BPD_transp_1 YYD2_k127_3395614_7 1318628.MARLIPOL_08249 0.0006232 49.0 COG0457@1|root,COG0457@2|Bacteria,1MXMD@1224|Proteobacteria,1RSI5@1236|Gammaproteobacteria,467VY@72275|Alteromonadaceae 1236|Gammaproteobacteria S COG0457 FOG TPR repeat - - - - - - - - - - - - TPR_11,TPR_14,TPR_16,TPR_19,TPR_4,TPR_6,TPR_8 YYD2_k127_3395614_1 926569.ANT_19280 1.011e-92 312.0 COG0149@1|root,COG0149@2|Bacteria,2G69W@200795|Chloroflexi 200795|Chloroflexi F Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) tpiA GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003 R01015 RC00423 ko00000,ko00001,ko00002,ko01000,ko04147 - - - TIM YYD2_k127_3395614_3 926569.ANT_19290 9.659e-58 209.0 2EV3Q@1|root,33NIR@2|Bacteria,2G9SC@200795|Chloroflexi 200795|Chloroflexi - - - - - - - - - - - - - - - YYD2_k127_3395614_2 1124780.ANNU01000036_gene60 8.503e-64 237.0 COG4745@1|root,COG4745@2|Bacteria,4P4EE@976|Bacteroidetes 976|Bacteroidetes O Dolichyl-phosphate-mannose-protein mannosyltransferase - - - - - - - - - - - - - YYD2_k127_3395614_5 1283299.AUKG01000002_gene3921 9.889e-39 160.0 2DMPK@1|root,32SWI@2|Bacteria,2GQNZ@201174|Actinobacteria 201174|Actinobacteria - - - - - - - - - - - - - - Mycobact_memb YYD2_k127_3395614_4 1131462.DCF50_p848 5.168e-54 198.0 COG2020@1|root,COG2020@2|Bacteria,1V0PB@1239|Firmicutes,24AQ6@186801|Clostridia,2643P@186807|Peptococcaceae 186801|Clostridia O Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - - - - - - - - - - ICMT,PEMT YYD2_k127_3395614_0 237368.SCABRO_02885 1.547e-133 433.0 COG1064@1|root,COG1064@2|Bacteria,2IY4H@203682|Planctomycetes 203682|Planctomycetes C alcohol dehydrogenase - - 1.1.1.1 ko:K13953 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 - R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310 RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273 ko00000,ko00001,ko01000 - - - ADH_N,ADH_zinc_N YYD2_k127_3403813_7 1121091.AUMP01000001_gene539 1.402e-88 299.0 COG1168@1|root,COG1168@2|Bacteria,1TP5G@1239|Firmicutes,4H9PE@91061|Bacilli 91061|Bacilli E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities patB - 4.4.1.8 ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 - R00782,R01286,R02408,R04941 RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 YYD2_k127_3403813_9 439235.Dalk_5022 2.466e-53 198.0 COG0697@1|root,COG0697@2|Bacteria,1R03B@1224|Proteobacteria,42S5I@68525|delta/epsilon subdivisions,2WNXS@28221|Deltaproteobacteria,2MNCD@213118|Desulfobacterales 28221|Deltaproteobacteria EG EamA-like transporter family - - - - - - - - - - - - EamA YYD2_k127_3403813_10 1157637.KB892101_gene2502 2.517e-51 199.0 COG0477@1|root,COG2814@2|Bacteria,2GJU2@201174|Actinobacteria 201174|Actinobacteria EGP Major facilitator Superfamily - - - - - - - - - - - - MFS_1,Sugar_tr YYD2_k127_3403813_11 1051632.TPY_0830 1.763e-49 192.0 COG0477@1|root,COG2814@2|Bacteria,1TSR2@1239|Firmicutes,24803@186801|Clostridia 186801|Clostridia EGP Major Facilitator - - - - - - - - - - - - MFS_1,Sugar_tr YYD2_k127_3403813_5 926569.ANT_02330 3.726e-101 336.0 COG0842@1|root,COG0842@2|Bacteria,2G5UH@200795|Chloroflexi 200795|Chloroflexi V PFAM ABC-2 type transporter - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane YYD2_k127_3403813_6 926569.ANT_02340 4.685e-93 316.0 COG0842@1|root,COG0842@2|Bacteria,2G5UH@200795|Chloroflexi 200795|Chloroflexi V PFAM ABC-2 type transporter - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane YYD2_k127_3403813_3 926569.ANT_02350 2.633e-146 472.0 COG1131@1|root,COG1131@2|Bacteria,2G5RD@200795|Chloroflexi 200795|Chloroflexi V PFAM ABC transporter related - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran,DUF4162 YYD2_k127_3403813_4 1379698.RBG1_1C00001G1066 2.29e-114 386.0 COG0260@1|root,COG0260@2|Bacteria,2NNKH@2323|unclassified Bacteria 2|Bacteria E Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides pepA GO:0001073,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006351,GO:0006355,GO:0006508,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009056,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016787,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019904,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042150,GO:0043170,GO:0043171,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043244,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0097718,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1903506,GO:2000112,GO:2001141 3.4.11.1,3.4.11.5 ko:K01255,ko:K01259 ko00330,ko00480,ko01100,map00330,map00480,map01100 - R00135,R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 - - - Peptidase_M17,Peptidase_M17_N YYD2_k127_3403813_1 926569.ANT_01210 8.407e-221 692.0 COG0402@1|root,COG0402@2|Bacteria,2G5X1@200795|Chloroflexi 200795|Chloroflexi F Amidohydrolase family - - - - - - - - - - - - Amidohydro_1 YYD2_k127_3403813_13 768710.DesyoDRAFT_4045 0.0007585 46.0 COG0823@1|root,COG0823@2|Bacteria,1VECP@1239|Firmicutes,24NKX@186801|Clostridia,262IG@186807|Peptococcaceae 186801|Clostridia U Involved in the tonB-independent uptake of proteins - - - - - - - - - - - - - YYD2_k127_3403813_0 926569.ANT_01220 1.852e-246 773.0 COG1001@1|root,COG1001@2|Bacteria,2G64P@200795|Chloroflexi 200795|Chloroflexi F Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family ade - 3.5.4.2 ko:K01486 ko00230,ko01100,map00230,map01100 - R01244 RC00477 ko00000,ko00001,ko01000 - - - Adenine_deam_C,Amidohydro_1 YYD2_k127_3403813_8 926569.ANT_01230 8.888e-73 252.0 COG2188@1|root,COG2188@2|Bacteria,2G781@200795|Chloroflexi 200795|Chloroflexi K UTRA - - - ko:K03710 - - - - ko00000,ko03000 - - - GntR,UTRA YYD2_k127_3403813_2 926569.ANT_01240 2.999e-174 558.0 COG0624@1|root,COG0624@2|Bacteria,2G8AH@200795|Chloroflexi 200795|Chloroflexi E Peptidase dimerisation domain - - - - - - - - - - - - M20_dimer,Peptidase_M20 YYD2_k127_3403813_12 196162.Noca_1631 1.017e-05 47.0 COG0540@1|root,COG0540@2|Bacteria,2GKNA@201174|Actinobacteria,4DV65@85009|Propionibacteriales 201174|Actinobacteria F Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain pyrB - 2.1.3.2 ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R01397 RC00064,RC02850 ko00000,ko00001,ko00002,ko01000 - - - OTCace,OTCace_N YYD2_k127_3426091_4 926569.ANT_19020 1.568e-12 66.0 COG0050@1|root,COG0050@2|Bacteria,2G5KI@200795|Chloroflexi 200795|Chloroflexi J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis tuf - - ko:K02358 - - - - ko00000,ko03012,ko03029,ko04147 - - - GTP_EFTU,GTP_EFTU_D2,GTP_EFTU_D3 YYD2_k127_3426091_1 926569.ANT_10010 0.0 1081.0 COG0480@1|root,COG0480@2|Bacteria,2G63B@200795|Chloroflexi 200795|Chloroflexi J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome fusA - - ko:K02355 - - - - ko00000,ko03012,ko03029 - - - EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2 YYD2_k127_3426091_3 926569.ANT_10000 6.789e-59 207.0 COG0049@1|root,COG0049@2|Bacteria,2G6GR@200795|Chloroflexi 200795|Chloroflexi J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA rpsG GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02992 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S7 YYD2_k127_3426091_2 926569.ANT_09990 1.436e-72 246.0 COG0048@1|root,COG0048@2|Bacteria,2G6EX@200795|Chloroflexi 200795|Chloroflexi J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit rpsL - - ko:K02950 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosom_S12_S23 YYD2_k127_3426091_0 926569.ANT_09980 0.0 2026.0 COG0085@1|root,COG0085@2|Bacteria,2G5VH@200795|Chloroflexi 200795|Chloroflexi K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates rpoB GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 - - - RNA_pol_Rpb2_1,RNA_pol_Rpb2_2,RNA_pol_Rpb2_3,RNA_pol_Rpb2_45,RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 YYD2_k127_3427038_1 926550.CLDAP_13480 4.548e-59 214.0 COG1082@1|root,COG1082@2|Bacteria,2G9PW@200795|Chloroflexi 200795|Chloroflexi G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2 YYD2_k127_3427038_2 349741.Amuc_1680 2.02e-46 176.0 COG0368@1|root,COG0368@2|Bacteria 2|Bacteria H Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate cobS - 2.7.8.26 ko:K02233 ko00860,ko01100,map00860,map01100 M00122 R05223,R11174 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - CobS YYD2_k127_3427038_0 357808.RoseRS_0559 2.298e-59 209.0 COG2038@1|root,COG2038@2|Bacteria,2G5R3@200795|Chloroflexi,376BT@32061|Chloroflexia 32061|Chloroflexia F Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) cobT - 2.4.2.21 ko:K00768 ko00860,ko01100,map00860,map01100 M00122 R04148 RC00033,RC00063 ko00000,ko00001,ko00002,ko01000 - - - DBI_PRT YYD2_k127_3431445_1 926569.ANT_28670 4.102e-45 166.0 COG1252@1|root,COG1252@2|Bacteria,2G5SS@200795|Chloroflexi 200795|Chloroflexi C PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - 1.6.99.3 ko:K03885 ko00190,map00190 - - - ko00000,ko00001,ko01000 - - - Pyr_redox_2 YYD2_k127_3431445_3 926569.ANT_15080 1.205e-18 97.0 COG1572@1|root,COG1572@2|Bacteria,2G9M8@200795|Chloroflexi 2|Bacteria S Ig-like domain from next to BRCA1 gene - - - - - - - - - - - - DUF11,N_BRCA1_IG YYD2_k127_3431445_4 42099.EPrPV00000016278 3.157e-17 93.0 COG2340@1|root,2S9B6@2759|Eukaryota,1MGWY@121069|Pythiales 121069|Pythiales S SCP-like extracellular protein. Source PGD - - - - - - - - - - - - CAP YYD2_k127_3431445_2 1463856.JOHY01000004_gene6507 6.376e-45 168.0 COG2606@1|root,COG2606@2|Bacteria,2IMZE@201174|Actinobacteria 201174|Actinobacteria G Aminoacyl-tRNA editing domain - - - ko:K19055 - - - - ko00000,ko01000,ko03016 - - - tRNA_edit YYD2_k127_3431445_0 768710.DesyoDRAFT_2109 1.502e-46 172.0 COG2050@1|root,COG2050@2|Bacteria,1VB47@1239|Firmicutes 1239|Firmicutes Q PFAM thioesterase superfamily - - - - - - - - - - - - 4HBT YYD2_k127_3445167_11 926569.ANT_10190 1.374e-39 148.0 COG0097@1|root,COG0097@2|Bacteria,2G6HZ@200795|Chloroflexi 200795|Chloroflexi J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center rplF GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02933 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L6 YYD2_k127_3445167_10 926569.ANT_10200 2.261e-42 158.0 COG0256@1|root,COG0256@2|Bacteria,2G6Y4@200795|Chloroflexi 200795|Chloroflexi J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance rplR GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - ko:K02881 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L18p YYD2_k127_3445167_5 926569.ANT_10210 4.299e-76 258.0 COG0098@1|root,COG0098@2|Bacteria,2G6M9@200795|Chloroflexi 200795|Chloroflexi J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body rpsE GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02988 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S5,Ribosomal_S5_C YYD2_k127_3445167_13 555088.DealDRAFT_1505 4.698e-14 74.0 COG1841@1|root,COG1841@2|Bacteria,1UUS5@1239|Firmicutes,258Q2@186801|Clostridia,42K7U@68298|Syntrophomonadaceae 186801|Clostridia J Ribosomal protein L30p/L7e rpmD - - ko:K02907 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L30 YYD2_k127_3445167_8 926569.ANT_10230 3.041e-54 195.0 COG0200@1|root,COG0200@2|Bacteria,2G6XY@200795|Chloroflexi 200795|Chloroflexi J Binds to the 23S rRNA rplO - - ko:K02876 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L27A YYD2_k127_3445167_0 926569.ANT_10240 4.024e-166 534.0 COG0201@1|root,COG0201@2|Bacteria,2G5X4@200795|Chloroflexi 200795|Chloroflexi U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently secY - - ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5 - - SecY YYD2_k127_3445167_4 926569.ANT_10250 2.917e-86 289.0 COG0563@1|root,COG0563@2|Bacteria,2G6GP@200795|Chloroflexi 200795|Chloroflexi F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism adk - 2.7.4.3 ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 M00049 R00127,R01547,R11319 RC00002 ko00000,ko00001,ko00002,ko01000,ko04147 - - - ADK,ADK_lid YYD2_k127_3445167_2 926569.ANT_10260 1.75e-110 362.0 COG0024@1|root,COG0024@2|Bacteria,2G6AV@200795|Chloroflexi 200795|Chloroflexi J TIGRFAM methionine aminopeptidase, type I - - 3.4.11.18 ko:K01265 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M24 YYD2_k127_3445167_14 926569.ANT_10270 1.62e-13 71.0 COG0257@1|root,COG0257@2|Bacteria 2|Bacteria J Belongs to the bacterial ribosomal protein bL36 family rpmJ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02919 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L36 YYD2_k127_3445167_7 926569.ANT_10280 4.162e-59 206.0 COG0099@1|root,COG0099@2|Bacteria,2G6PF@200795|Chloroflexi 200795|Chloroflexi J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits rpsM GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02952 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S13 YYD2_k127_3445167_6 926569.ANT_10290 8.375e-62 214.0 COG0100@1|root,COG0100@2|Bacteria,2G6HG@200795|Chloroflexi 200795|Chloroflexi J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome rpsK - - ko:K02948 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S11 YYD2_k127_3445167_3 926569.ANT_10300 8.002e-96 317.0 COG0522@1|root,COG0522@2|Bacteria,2G6AZ@200795|Chloroflexi 200795|Chloroflexi J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit rpsD GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - ko:K02986 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S4,S4 YYD2_k127_3445167_1 926569.ANT_10310 7.102e-156 496.0 COG0202@1|root,COG0202@2|Bacteria,2G5M9@200795|Chloroflexi 200795|Chloroflexi K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates rpoA GO:0003674,GO:0003824,GO:0003899,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 - - - RNA_pol_A_CTD,RNA_pol_A_bac,RNA_pol_L YYD2_k127_3445167_12 926569.ANT_10320 6.785e-37 141.0 COG0203@1|root,COG0203@2|Bacteria,2G79I@200795|Chloroflexi 200795|Chloroflexi J Ribosomal protein L17 rplQ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02879 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L17 YYD2_k127_3445167_9 926569.ANT_10330 2.372e-46 171.0 COG0101@1|root,COG0101@2|Bacteria,2G6PE@200795|Chloroflexi 200795|Chloroflexi J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs truA GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 ko:K06173 - - - - ko00000,ko01000,ko03016 - - - PseudoU_synth_1 YYD2_k127_3445670_3 1198114.AciX9_0222 2.658e-08 64.0 COG4409@1|root,COG4409@2|Bacteria,3Y2GG@57723|Acidobacteria,2JI5J@204432|Acidobacteriia 204432|Acidobacteriia G Belongs to the peptidase S8 family - - - - - - - - - - - - ASH,DUF1573 YYD2_k127_3445670_0 926569.ANT_02890 1.215e-97 324.0 COG1738@1|root,COG1738@2|Bacteria,2G6BZ@200795|Chloroflexi 200795|Chloroflexi S Involved in the import of queuosine (Q) precursors, required for Q precursor salvage - - - ko:K09125 - - - - ko00000 - - - Vut_1 YYD2_k127_3445670_1 204536.SULAZ_1054 1.064e-89 304.0 COG0037@1|root,COG0037@2|Bacteria,2G4GJ@200783|Aquificae 200783|Aquificae D PP-loop family - - 2.8.1.15 ko:K21947 - - - - ko00000,ko01000,ko03016 - - - ATP_bind_3 YYD2_k127_3445670_4 926569.ANT_13050 3.86e-06 51.0 COG2104@1|root,COG2104@2|Bacteria 2|Bacteria H thiamine diphosphate biosynthetic process thiS - - ko:K03154 ko04122,map04122 - - - ko00000,ko00001 - - - ThiS YYD2_k127_3445670_2 931627.MycrhDRAFT_3424 4.943e-38 158.0 COG1432@1|root,COG1432@2|Bacteria,2HB6H@201174|Actinobacteria,23514@1762|Mycobacteriaceae 201174|Actinobacteria S OST-HTH/LOTUS domain - - - - - - - - - - - - NYN,OST-HTH YYD2_k127_3460960_3 926569.ANT_30840 1.593e-24 109.0 COG0664@1|root,COG0664@2|Bacteria 2|Bacteria T cyclic nucleotide binding - - - ko:K10914 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 - - - ko00000,ko00001,ko03000 - - - Fer4_7,HTH_Crp_2,cNMP_binding YYD2_k127_3460960_2 383372.Rcas_0861 1.535e-25 117.0 COG0526@1|root,COG0526@2|Bacteria,2G72F@200795|Chloroflexi,377HE@32061|Chloroflexia 32061|Chloroflexia CO PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - - - - - - - - - - AhpC-TSA YYD2_k127_3460960_1 926569.ANT_12060 1.087e-34 138.0 COG1765@1|root,COG1765@2|Bacteria,2G6Y1@200795|Chloroflexi 200795|Chloroflexi O PFAM OsmC family protein - - - ko:K07397 - - - - ko00000 - - - OsmC YYD2_k127_3460960_0 926569.ANT_12080 6.805e-69 238.0 COG0739@1|root,COG1388@1|root,COG0739@2|Bacteria,COG1388@2|Bacteria 2|Bacteria M LysM domain - - - - - - - - - - - - LysM,OapA,OapA_N,Peptidase_M23 YYD2_k127_3474652_1 1382356.JQMP01000003_gene1420 5.637e-65 229.0 COG0276@1|root,COG0276@2|Bacteria,2G6A2@200795|Chloroflexi,27XJN@189775|Thermomicrobia 189775|Thermomicrobia H Catalyzes the ferrous insertion into protoporphyrin IX hemH - 4.99.1.1,4.99.1.9 ko:K01772 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R00310,R11329 RC01012 ko00000,ko00001,ko00002,ko01000 - - - Ferrochelatase YYD2_k127_3474652_0 926569.ANT_08350 4.276e-203 640.0 COG0243@1|root,COG1034@1|root,COG0243@2|Bacteria,COG1034@2|Bacteria 2|Bacteria C ATP synthesis coupled electron transport nuoG GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009405,GO:0010941,GO:0016020,GO:0016491,GO:0016651,GO:0030312,GO:0033668,GO:0035821,GO:0042981,GO:0043067,GO:0043069,GO:0044003,GO:0044068,GO:0044403,GO:0044419,GO:0044464,GO:0044531,GO:0044532,GO:0048037,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051536,GO:0051540,GO:0051701,GO:0051704,GO:0051817,GO:0052040,GO:0052041,GO:0052150,GO:0052248,GO:0052433,GO:0052490,GO:0055114,GO:0060548,GO:0065007,GO:0071944 1.6.5.3 ko:K00336 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Fer2_4,Molybdop_Fe4S4,Molybdopterin,Molydop_binding,NADH-G_4Fe-4S_3 YYD2_k127_3481024_12 926569.ANT_20880 1.559e-09 64.0 COG1011@1|root,COG1011@2|Bacteria,2G74Q@200795|Chloroflexi 200795|Chloroflexi S DinB superfamily - - - - - - - - - - - - DinB_2 YYD2_k127_3481024_7 1347086.CCBA010000007_gene4518 3.944e-38 151.0 COG1028@1|root,COG1028@2|Bacteria,1TPIK@1239|Firmicutes,4HC6E@91061|Bacilli,1ZBHS@1386|Bacillus 91061|Bacilli IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - 1.1.1.100 ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short_C2 YYD2_k127_3481024_3 926569.ANT_29790 9.377e-83 282.0 COG0739@1|root,COG0739@2|Bacteria 2|Bacteria M heme binding - - - ko:K21472 - - - - ko00000,ko01000,ko01002,ko01011 - - - Peptidase_M23 YYD2_k127_3481024_0 1279009.ADICEAN_00534 3.007e-166 535.0 COG1404@1|root,COG1404@2|Bacteria 2|Bacteria O Belongs to the peptidase S8 family isp - - ko:K13275 - - - - ko00000,ko01000,ko01002,ko03110 - - - Peptidase_S8 YYD2_k127_3481024_10 1122222.AXWR01000037_gene287 1.08e-12 78.0 COG0071@1|root,COG0071@2|Bacteria,1WJU3@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus O Belongs to the small heat shock protein (HSP20) family - - - ko:K13993 ko04141,map04141 - - - ko00000,ko00001,ko03110 - - - HSP20 YYD2_k127_3481024_5 926569.ANT_04400 7.674e-60 220.0 COG0454@1|root,COG1247@1|root,COG0456@2|Bacteria,COG1247@2|Bacteria,2G6N6@200795|Chloroflexi 200795|Chloroflexi K PFAM GCN5-related N-acetyltransferase - - - - - - - - - - - - Acetyltransf_1 YYD2_k127_3481024_6 926569.ANT_31060 1.832e-39 154.0 COG1011@1|root,COG1011@2|Bacteria,2G787@200795|Chloroflexi 200795|Chloroflexi S TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - 3.1.3.10 ko:K07025,ko:K20866 ko00010,ko01120,map00010,map01120 - R00947 RC00078 ko00000,ko00001,ko01000 - - - HAD_2 YYD2_k127_3481024_2 479434.Sthe_2033 2.964e-96 329.0 COG0477@1|root,COG0477@2|Bacteria,2G5UF@200795|Chloroflexi 200795|Chloroflexi EGP PFAM major facilitator superfamily MFS_1 - - - - - - - - - - - - MFS_1 YYD2_k127_3481024_8 1254432.SCE1572_00800 6.832e-25 105.0 COG4430@1|root,COG4430@2|Bacteria,1NASK@1224|Proteobacteria,43202@68525|delta/epsilon subdivisions,2WX2P@28221|Deltaproteobacteria,2Z2U2@29|Myxococcales 28221|Deltaproteobacteria S Bacteriocin-protection, YdeI or OmpD-Associated - - - - - - - - - - - - OmdA YYD2_k127_3481024_9 684949.ATTJ01000002_gene106 2.536e-19 98.0 2ECKJ@1|root,33KDJ@2|Bacteria,1WMG2@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus - - - - - - - - - - - - - - DinB_2 YYD2_k127_3481024_4 926560.KE387023_gene3084 3.011e-60 216.0 COG2258@1|root,COG2258@2|Bacteria,1WMGD@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S MOSC domain - - - - - - - - - - - - 3-alpha,MOSC YYD2_k127_3481024_11 1526927.Plano_0502 1.456e-10 68.0 COG5649@1|root,COG5649@2|Bacteria,1VF35@1239|Firmicutes,4HQN0@91061|Bacilli,26G7B@186818|Planococcaceae 91061|Bacilli S Domain of unknown function (DU1801) - - - - - - - - - - - - DUF1801 YYD2_k127_3481024_1 552811.Dehly_0399 2.248e-144 470.0 COG1132@1|root,COG1132@2|Bacteria,2G5P7@200795|Chloroflexi,34CKH@301297|Dehalococcoidia 301297|Dehalococcoidia V ABC transporter transmembrane region - - - ko:K06147 - - - - ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 - - ABC_membrane,ABC_tran YYD2_k127_3491271_6 298653.Franean1_6462 5.462e-14 73.0 2DM8J@1|root,32695@2|Bacteria,2I561@201174|Actinobacteria 201174|Actinobacteria - - - - - - - - - - - - - - - YYD2_k127_3491271_0 926569.ANT_06130 5.094e-105 353.0 COG1376@1|root,COG1376@2|Bacteria 2|Bacteria D ErfK ybiS ycfS ynhG family protein - - - - - - - - - - - - DUF5011,LysM,YkuD YYD2_k127_3491271_4 926569.ANT_03760 8.333e-57 200.0 COG2018@1|root,COG2018@2|Bacteria,2G8WW@200795|Chloroflexi 200795|Chloroflexi S PFAM Roadblock LC7 family protein - - - ko:K07131 - - - - ko00000 - - - Robl_LC7 YYD2_k127_3491271_3 926569.ANT_03770 3.072e-87 292.0 COG1719@1|root,COG1719@2|Bacteria,2G8D0@200795|Chloroflexi 200795|Chloroflexi S 4-vinyl reductase, 4VR - - - - - - - - - - - - V4R YYD2_k127_3491271_2 926569.ANT_03790 1.184e-93 314.0 COG0463@1|root,COG0463@2|Bacteria,2GBP0@200795|Chloroflexi 200795|Chloroflexi M Glycosyltransferase like family 2 - - 2.4.1.83 ko:K00721 ko00510,ko01100,map00510,map01100 - R01009 RC00005 ko00000,ko00001,ko01000,ko01003 - GT2 - Glycos_transf_2 YYD2_k127_3491271_1 926569.ANT_03800 3.881e-94 317.0 COG0030@1|root,COG0030@2|Bacteria,2G6DA@200795|Chloroflexi 200795|Chloroflexi J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits ksgA - 2.1.1.182 ko:K02528 - - R10716 RC00003,RC03257 ko00000,ko01000,ko03009 - - - RrnaAD YYD2_k127_3491271_5 926569.ANT_03810 4.988e-37 144.0 COG3583@1|root,COG3584@1|root,COG3583@2|Bacteria,COG3584@2|Bacteria,2G8CU@200795|Chloroflexi 200795|Chloroflexi S Domain of unknown function (DUF348) - - - - - - - - - - - - DUF348,G5 YYD2_k127_3502833_0 485913.Krac_12461 1.056e-78 277.0 COG2355@1|root,COG2355@2|Bacteria,2G6FQ@200795|Chloroflexi 200795|Chloroflexi E Membrane dipeptidase (Peptidase family M19) - - 3.4.13.19 ko:K01273 - - - - ko00000,ko00537,ko01000,ko01002,ko04147 - - - Peptidase_M19 YYD2_k127_3502833_1 926569.ANT_30410 8.859e-77 262.0 COG0539@1|root,COG0539@2|Bacteria,2G656@200795|Chloroflexi 200795|Chloroflexi J PFAM RNA binding S1 domain protein - - - ko:K02945 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - S1 YYD2_k127_3510709_0 1123248.KB893314_gene3519 9.429e-135 437.0 COG0667@1|root,COG0667@2|Bacteria,4NEDK@976|Bacteroidetes,1IQPY@117747|Sphingobacteriia 976|Bacteroidetes C COGs COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase) - - - - - - - - - - - - Aldo_ket_red YYD2_k127_3510709_2 1243664.CAVL020000009_gene633 5.943e-12 71.0 COG3375@1|root,COG3375@2|Bacteria,1V21D@1239|Firmicutes,4HG3H@91061|Bacilli,1ZCQS@1386|Bacillus 91061|Bacilli M carboxylic acid catabolic process - - - - - - - - - - - - Acetyltransf_1 YYD2_k127_3547352_1 215358.XP_010751024.1 6.755e-08 63.0 KOG4351@1|root,KOG4351@2759|Eukaryota,38HHX@33154|Opisthokonta,3B9X5@33208|Metazoa,3CU75@33213|Bilateria,4841R@7711|Chordata,490A6@7742|Vertebrata,4A0W8@7898|Actinopterygii 33208|Metazoa S Chromosome 6 open reading frame 106 C6orf106 GO:0000407,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005776,GO:0006914,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016236,GO:0032182,GO:0043130,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0061919 - - - - - - - - - - N_BRCA1_IG,UBA_4 YYD2_k127_3547352_0 926569.ANT_22190 2.325e-90 308.0 COG1572@1|root,COG1572@2|Bacteria,2G9M8@200795|Chloroflexi 2|Bacteria S Ig-like domain from next to BRCA1 gene - - - - - - - - - - - - DUF11,N_BRCA1_IG YYD2_k127_355456_0 926569.ANT_25980 4.079e-132 434.0 COG1030@1|root,COG1030@2|Bacteria,2G6E2@200795|Chloroflexi 200795|Chloroflexi O NfeD-like C-terminal, partner-binding - - - ko:K07403 - - - - ko00000 - - - CLP_protease,NfeD YYD2_k127_355456_1 403833.Pmob_0983 1.695e-81 279.0 COG0730@1|root,COG0730@2|Bacteria 2|Bacteria S response to heat ytnM - - ko:K07090 - - - - ko00000 - - - NAD_binding_7,Sirohm_synth_M,TauE YYD2_k127_3643204_5 926569.ANT_20830 3.031e-10 60.0 COG1893@1|root,COG1893@2|Bacteria,2G718@200795|Chloroflexi 200795|Chloroflexi H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - 1.1.1.169 ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R02472 RC00726 ko00000,ko00001,ko00002,ko01000 - - - ApbA,ApbA_C YYD2_k127_3643204_6 926569.ANT_20830 0.0001846 44.0 COG1893@1|root,COG1893@2|Bacteria,2G718@200795|Chloroflexi 200795|Chloroflexi H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - 1.1.1.169 ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R02472 RC00726 ko00000,ko00001,ko00002,ko01000 - - - ApbA,ApbA_C YYD2_k127_3643204_4 404380.Gbem_1627 1.055e-35 156.0 COG3119@1|root,COG3119@2|Bacteria 2|Bacteria P arylsulfatase activity - - - ko:K07014 - - - - ko00000 - - - Cu-binding_MopE,Sulfatase YYD2_k127_3643204_0 452637.Oter_2238 5.77e-213 675.0 COG0441@1|root,COG0572@1|root,COG0441@2|Bacteria,COG0572@2|Bacteria 2|Bacteria F uridine kinase udk - 2.7.1.48 ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 - R00513,R00516,R00517,R00962,R00964,R00967,R00968,R00970,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PRK YYD2_k127_3643204_1 926569.ANT_08430 2.835e-81 279.0 COG1836@1|root,COG1836@2|Bacteria,2G6N3@200795|Chloroflexi 200795|Chloroflexi S Integral membrane protein DUF92 - - - - - - - - - - - - DUF92 YYD2_k127_3643204_2 316274.Haur_3563 4.842e-56 206.0 COG0442@1|root,COG0442@2|Bacteria,2G5Q6@200795|Chloroflexi,374ZE@32061|Chloroflexia 32061|Chloroflexia J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS - - 6.1.1.15 ko:K01881 ko00970,map00970 M00359,M00360 R03661 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - HGTP_anticodon,tRNA-synt_2b,tRNA_edit YYD2_k127_3643807_9 926569.ANT_31100 2.22e-19 92.0 COG0747@1|root,COG0747@2|Bacteria,2G7MC@200795|Chloroflexi 200795|Chloroflexi E PFAM extracellular solute-binding protein, family 5 - - - ko:K02035 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - SBP_bac_5 YYD2_k127_3643807_0 926569.ANT_01410 2.277e-165 525.0 COG4608@1|root,COG4608@2|Bacteria,2G5R5@200795|Chloroflexi 200795|Chloroflexi P Belongs to the ABC transporter superfamily - - - ko:K02032,ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 - - ABC_tran,oligo_HPY YYD2_k127_3643807_1 926569.ANT_01400 1.137e-155 499.0 COG0444@1|root,COG0444@2|Bacteria,2G5PT@200795|Chloroflexi 200795|Chloroflexi P Belongs to the ABC transporter superfamily - - - ko:K02031 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - ABC_tran,oligo_HPY YYD2_k127_3643807_10 861299.J421_1808 1.218e-10 70.0 COG2010@1|root,COG2010@2|Bacteria,1ZV0S@142182|Gemmatimonadetes 142182|Gemmatimonadetes C Cytochrome C oxidase, cbb3-type, subunit III - - - ko:K08738 ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 3.D.4.6 - - Cytochrome_CBB3 YYD2_k127_3643807_6 1116369.KB890024_gene4429 1.311e-81 284.0 COG1173@1|root,COG1173@2|Bacteria,1MUG0@1224|Proteobacteria,2TT4V@28211|Alphaproteobacteria 28211|Alphaproteobacteria EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems permease components - - - - - - - - - - - - BPD_transp_1,OppC_N YYD2_k127_3643807_5 1150474.JQJI01000048_gene1239 6.923e-108 359.0 COG0601@1|root,COG0601@2|Bacteria,2GBX3@200918|Thermotogae 200918|Thermotogae P PFAM binding-protein-dependent transport systems inner membrane component - - - ko:K02033 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - BPD_transp_1 YYD2_k127_3643807_4 243274.THEMA_02390 1.899e-114 394.0 COG0747@1|root,COG0747@2|Bacteria,2GC5G@200918|Thermotogae 200918|Thermotogae E PFAM extracellular solute-binding protein, family 5 - - - ko:K02035 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - SBP_bac_5 YYD2_k127_3643807_2 1173026.Glo7428_3203 1.616e-142 459.0 COG4608@1|root,COG4608@2|Bacteria,1G1Q0@1117|Cyanobacteria 1117|Cyanobacteria P Belongs to the ABC transporter superfamily - - - ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00439 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 - - ABC_tran,oligo_HPY YYD2_k127_3643807_3 926550.CLDAP_11120 7.78e-137 442.0 COG0444@1|root,COG0444@2|Bacteria,2G61B@200795|Chloroflexi 200795|Chloroflexi P Belongs to the ABC transporter superfamily - - - ko:K02031,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 - - ABC_tran,oligo_HPY YYD2_k127_3643807_7 1033744.CAEL01000023_gene279 1.104e-41 156.0 COG1970@1|root,COG1970@2|Bacteria,1VA14@1239|Firmicutes,24JAB@186801|Clostridia,22HFM@1570339|Peptoniphilaceae 186801|Clostridia M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell mscL - - ko:K03282 - - - - ko00000,ko02000 1.A.22.1 - - MscL YYD2_k127_3643807_8 926569.ANT_25570 9.527e-31 123.0 COG0210@1|root,COG0210@2|Bacteria,2G5XF@200795|Chloroflexi 200795|Chloroflexi L PFAM UvrD REP helicase pcrA - 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - UvrD-helicase,UvrD_C YYD2_k127_3665831_1 357808.RoseRS_4510 4.391e-163 518.0 COG0370@1|root,COG0370@2|Bacteria,2GBTA@200795|Chloroflexi,37667@32061|Chloroflexia 32061|Chloroflexia P Ferrous iron transport protein B C terminus - - - ko:K04759 - - - - ko00000,ko02000 9.A.8.1 - - FeoB_C,Gate YYD2_k127_3665831_4 357808.RoseRS_4511 1.111e-133 430.0 COG0370@1|root,COG0370@2|Bacteria,2GAJB@200795|Chloroflexi,376HM@32061|Chloroflexia 32061|Chloroflexia P Ferrous iron transport protein B - - - - - - - - - - - - FeoB_N YYD2_k127_3665831_3 357808.RoseRS_4512 3.507e-141 456.0 COG1321@1|root,COG1918@1|root,COG1321@2|Bacteria,COG1918@2|Bacteria 2|Bacteria P iron ion homeostasis feoA - - ko:K03322,ko:K03709,ko:K04758 - - - - ko00000,ko02000,ko03000 2.A.55.2.6,2.A.55.3 - - Fe_dep_repr_C,FeoA YYD2_k127_3665831_5 926550.CLDAP_26730 9.44e-68 237.0 COG1321@1|root,COG1918@1|root,COG1321@2|Bacteria,COG1918@2|Bacteria,2G6N4@200795|Chloroflexi 200795|Chloroflexi K iron dependent repressor - - - ko:K03709 - - - - ko00000,ko03000 - - - Fe_dep_repr_C,Fe_dep_repress,FeoA YYD2_k127_3665831_2 926569.ANT_08120 5.516e-144 466.0 COG1940@1|root,COG1940@2|Bacteria,2G7R1@200795|Chloroflexi 200795|Chloroflexi K PFAM ROK family protein - - - - - - - - - - - - HTH_24,ROK YYD2_k127_3665831_0 926569.ANT_08110 9.461e-199 629.0 COG1940@1|root,COG1940@2|Bacteria 2|Bacteria GK ROK family - - 2.7.1.188,2.7.1.2,2.7.1.214,2.7.1.60,5.1.3.9 ko:K00845,ko:K13967,ko:K19979,ko:K20433 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko00525,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map00525,map01100,map01110,map01120,map01130,map01200 M00001,M00549,M00814,M00815 R00299,R01600,R01786,R02087,R02705,R11185,R11234 RC00002,RC00017,RC00290 ko00000,ko00001,ko00002,ko01000 - - - ROK YYD2_k127_3684342_1 519989.ECTPHS_06807 6.202e-06 54.0 COG0515@1|root,COG0515@2|Bacteria,1MV1P@1224|Proteobacteria,1RR36@1236|Gammaproteobacteria,1WYS8@135613|Chromatiales 135613|Chromatiales KLT serine threonine protein kinase - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - HAMP,HEAT_2,Pkinase,sCache_3_2 YYD2_k127_3684342_0 926569.ANT_06180 6.056e-78 275.0 COG1316@1|root,COG1316@2|Bacteria,2G6PZ@200795|Chloroflexi 200795|Chloroflexi K TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - - - - - - - - - - LytR_C,LytR_cpsA_psr YYD2_k127_369282_3 1268303.RHODMAR_2721 1.224e-06 55.0 2AR1Y@1|root,31GAW@2|Bacteria,2HK0E@201174|Actinobacteria,4G7PU@85025|Nocardiaceae 201174|Actinobacteria - - - - - - - - - - - - - - - YYD2_k127_369282_0 926569.ANT_09480 1.271e-128 421.0 COG0237@1|root,COG0237@2|Bacteria,2G6RQ@200795|Chloroflexi 200795|Chloroflexi F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A coaE - 2.7.1.24 ko:K00859 ko00770,ko01100,map00770,map01100 M00120 R00130 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - CoaE YYD2_k127_369282_1 926569.ANT_09470 6.173e-104 345.0 COG1624@1|root,COG1624@2|Bacteria,2G6J7@200795|Chloroflexi 200795|Chloroflexi S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria dacA - 2.7.7.85 ko:K18672 - - - - ko00000,ko01000 - - - DisA_N YYD2_k127_369282_2 926569.ANT_09460 1.22e-77 271.0 COG4856@1|root,COG4856@2|Bacteria,2G75D@200795|Chloroflexi 200795|Chloroflexi S PFAM YbbR family protein - - - - - - - - - - - - YbbR YYD2_k127_3700162_19 383372.Rcas_1934 8.036e-58 205.0 COG0446@1|root,COG1902@1|root,COG0446@2|Bacteria,COG1902@2|Bacteria,2G7MP@200795|Chloroflexi,3760K@32061|Chloroflexia 32061|Chloroflexia C PFAM NADH flavin oxidoreductase NADH oxidase - - 1.5.8.1,1.5.8.2 ko:K00317 ko00680,ko01120,ko01200,map00680,map01120,map01200 - R01588,R02511 RC00185,RC00556,RC00557,RC00732 ko00000,ko00001,ko01000 - - - Oxidored_FMN,Pyr_redox_2 YYD2_k127_3700162_14 926569.ANT_29550 2.49e-76 265.0 COG0631@1|root,COG0631@2|Bacteria,2G6R4@200795|Chloroflexi 200795|Chloroflexi T SMART protein phosphatase 2C domain protein - - 3.1.3.16 ko:K20074 - - - - ko00000,ko01000,ko01009 - - - PP2C,PP2C_2 YYD2_k127_3700162_8 926569.ANT_29560 8.847e-91 323.0 COG1716@1|root,COG1716@2|Bacteria 2|Bacteria T histone H2A K63-linked ubiquitination CP_0034 - - - - - - - - - - - BON,FHA,FTSW_RODA_SPOVE,Yop-YscD_cpl YYD2_k127_3700162_24 926569.ANT_25500 4.991e-38 156.0 2DFV5@1|root,2ZT9W@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - YYD2_k127_3700162_1 557598.LHK_00777 3.271e-183 586.0 COG0518@1|root,COG0519@1|root,COG0518@2|Bacteria,COG0519@2|Bacteria,1MU2A@1224|Proteobacteria,2VHNG@28216|Betaproteobacteria,2KPJ8@206351|Neisseriales 206351|Neisseriales F Catalyzes the synthesis of GMP from XMP guaA - 6.3.5.2 ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002 - - - GATase,GMP_synt_C,NAD_synthase YYD2_k127_3700162_10 926569.ANT_25520 3.401e-82 278.0 COG0503@1|root,COG0503@2|Bacteria,2G71F@200795|Chloroflexi 200795|Chloroflexi F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis xpt - 2.4.2.22 ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 - R01229,R02142 RC00063,RC00122 ko00000,ko00001,ko01000 - - - Pribosyltran YYD2_k127_3700162_16 926569.ANT_02780 3.366e-74 256.0 COG0424@1|root,COG0424@2|Bacteria,2G6U2@200795|Chloroflexi 200795|Chloroflexi D PFAM Maf family protein maf - - ko:K06287 - - - - ko00000 - - - Maf YYD2_k127_3700162_0 926569.ANT_02790 3.336e-187 609.0 COG0768@1|root,COG0768@2|Bacteria,2G7WI@200795|Chloroflexi 200795|Chloroflexi M NTF2-like N-terminal transpeptidase domain - - 3.4.16.4 ko:K05515 ko00550,ko01501,map00550,map01501 - - - ko00000,ko00001,ko01000,ko01011 - - - MecA_N,PBP_dimer,Transpeptidase YYD2_k127_3700162_5 926569.ANT_02800 3.964e-121 399.0 COG1162@1|root,COG1162@2|Bacteria,2G5IS@200795|Chloroflexi 200795|Chloroflexi S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit rsgA - 3.1.3.100 ko:K06949 ko00730,ko01100,map00730,map01100 - R00615,R02135 RC00002,RC00017 ko00000,ko00001,ko01000,ko03009 - - - RsgA_GTPase,RsgA_N YYD2_k127_3700162_11 926569.ANT_02540 1.392e-81 283.0 COG2812@1|root,COG2812@2|Bacteria,2G6K3@200795|Chloroflexi 200795|Chloroflexi L DNA polymerase III, delta prime subunit holB - 2.7.7.7 ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_delta2,DNApol3-delta_C YYD2_k127_3700162_23 138119.DSY3875 1.528e-40 151.0 2E5N7@1|root,330D0@2|Bacteria,1VF9Q@1239|Firmicutes,24MMH@186801|Clostridia 186801|Clostridia S Domain of unknown function (DUF4491) - - - - - - - - - - - - DUF4491 YYD2_k127_3700162_15 926569.ANT_30490 2.421e-75 264.0 COG0496@1|root,COG0496@2|Bacteria 2|Bacteria P Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates surE - 3.1.3.5 ko:K03787 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 - R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346 RC00017 ko00000,ko00001,ko01000 - - - SurE YYD2_k127_3700162_25 858215.Thexy_1127 1.803e-27 115.0 COG3118@1|root,COG3118@2|Bacteria,1VA3Y@1239|Firmicutes,24MM5@186801|Clostridia,42GY9@68295|Thermoanaerobacterales 186801|Clostridia O Belongs to the thioredoxin family trxA - - ko:K03671 ko04621,ko05418,map04621,map05418 - - - ko00000,ko00001,ko03110 - - - Thioredoxin YYD2_k127_3700162_18 671143.DAMO_0010 6.643e-68 243.0 COG0483@1|root,COG0483@2|Bacteria,2NP94@2323|unclassified Bacteria 2|Bacteria G Inositol monophosphatase suhB GO:0003674,GO:0003824,GO:0005975,GO:0006020,GO:0006066,GO:0006793,GO:0006796,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008934,GO:0009056,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0019751,GO:0023052,GO:0042578,GO:0043647,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0046164,GO:0046174,GO:0046434,GO:0046838,GO:0046855,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052745,GO:0052834,GO:0065007,GO:0071545,GO:0071704,GO:1901575,GO:1901615,GO:1901616 3.1.3.25,3.1.3.7 ko:K01082,ko:K01092 ko00521,ko00562,ko00920,ko01100,ko01120,ko01130,ko04070,map00521,map00562,map00920,map01100,map01120,map01130,map04070 M00131 R00188,R00508,R01185,R01186,R01187 RC00078 ko00000,ko00001,ko00002,ko01000,ko03016 - - - Inositol_P YYD2_k127_3700162_6 1128421.JAGA01000001_gene2047 3.037e-109 361.0 COG0010@1|root,COG0010@2|Bacteria 2|Bacteria E hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines rocF GO:0003674,GO:0003824,GO:0004053,GO:0006082,GO:0006520,GO:0006525,GO:0006807,GO:0008150,GO:0008152,GO:0009064,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 3.5.3.1,3.5.3.11 ko:K01476,ko:K01480 ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146 M00029,M00133,M00134 R00551,R01157 RC00024,RC00329 ko00000,ko00001,ko00002,ko01000 - - - Arginase YYD2_k127_3700162_13 926569.ANT_24870 2.626e-77 263.0 COG1418@1|root,COG1418@2|Bacteria,2G77Y@200795|Chloroflexi 200795|Chloroflexi S PFAM metal-dependent phosphohydrolase, HD sub domain - - - ko:K06950 - - - - ko00000 - - - HD YYD2_k127_3700162_4 926569.ANT_19100 3.959e-128 417.0 COG0392@1|root,COG0392@2|Bacteria,2G5KF@200795|Chloroflexi 200795|Chloroflexi S PFAM conserved - - - ko:K07027 - - - - ko00000,ko02000 4.D.2 - - LPG_synthase_TM YYD2_k127_3700162_20 926569.ANT_03600 6.889e-46 171.0 COG1225@1|root,COG1225@2|Bacteria,2G9KJ@200795|Chloroflexi 200795|Chloroflexi O PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - - - - - - - - - - AhpC-TSA YYD2_k127_3700162_9 926569.ANT_30100 5.536e-88 311.0 COG2905@1|root,COG2905@2|Bacteria 2|Bacteria T signal-transduction protein containing cAMP-binding and CBS domains - - - - - - - - - - - - Hemerythrin,Lactamase_B,Lactamase_B_2,cNMP_binding YYD2_k127_3700162_17 926569.ANT_31550 3.81e-70 241.0 COG0242@1|root,COG0242@2|Bacteria,2G6VE@200795|Chloroflexi 200795|Chloroflexi J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions def GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 ko:K01462 - - - - ko00000,ko01000 - - - Pep_deformylase YYD2_k127_3700162_21 986075.CathTA2_0384 3.603e-42 160.0 COG0454@1|root,COG0456@2|Bacteria,1V6D6@1239|Firmicutes,4HIQX@91061|Bacilli 91061|Bacilli K histone acetyltransferase HPA2 and related acetyltransferases yxbD GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008080,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0044424,GO:0044464 3.2.2.20 ko:K01246 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Acetyltransf_1 YYD2_k127_3700162_2 926569.ANT_31560 5.324e-144 467.0 COG1195@1|root,COG1195@2|Bacteria,2G60N@200795|Chloroflexi 200795|Chloroflexi L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP recF GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - ko:K03629 ko03440,map03440 - - - ko00000,ko00001,ko03400 - - - SMC_N YYD2_k127_3700162_22 382464.ABSI01000011_gene2976 7.007e-42 158.0 COG1917@1|root,COG1917@2|Bacteria 2|Bacteria L Cupin 2, conserved barrel domain protein - - - - - - - - - - - - Cupin_2 YYD2_k127_3700162_7 926569.ANT_30070 5.558e-97 323.0 COG0357@1|root,COG0357@2|Bacteria,2G6HF@200795|Chloroflexi 200795|Chloroflexi J Specifically methylates the N7 position of a guanine in 16S rRNA rsmG GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 ko:K03501 - - - - ko00000,ko01000,ko03009,ko03036 - - - GidB YYD2_k127_3700162_3 324602.Caur_3475 3.971e-137 446.0 COG0438@1|root,COG0438@2|Bacteria,2G84C@200795|Chloroflexi,375HH@32061|Chloroflexia 32061|Chloroflexia M PFAM glycosyl transferase group 1 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1,Methyltransf_11 YYD2_k127_3700162_12 926569.ANT_15880 5.365e-79 272.0 COG0500@1|root,COG2226@2|Bacteria,2G8SE@200795|Chloroflexi 200795|Chloroflexi Q Methyltransferase domain - - - - - - - - - - - - Methyltransf_11 YYD2_k127_3700162_26 1120948.KB903219_gene718 1.57e-20 104.0 COG2227@1|root,COG2227@2|Bacteria,2HJ6J@201174|Actinobacteria,4E7I0@85010|Pseudonocardiales 201174|Actinobacteria H Methyltransferase domain - - - - - - - - - - - - Methyltransf_23 YYD2_k127_3736150_3 926569.ANT_00990 5.632e-72 248.0 COG1215@1|root,COG1215@2|Bacteria,2GA7S@200795|Chloroflexi 200795|Chloroflexi M PFAM Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 YYD2_k127_3736150_4 243164.DET0780 2.98e-46 175.0 COG0164@1|root,COG0164@2|Bacteria,2G6KR@200795|Chloroflexi,34CNZ@301297|Dehalococcoidia 301297|Dehalococcoidia L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids rnhB - 3.1.26.4 ko:K03470 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - RNase_HII YYD2_k127_3736150_1 926569.ANT_30970 9.786e-100 328.0 COG1838@1|root,COG1838@2|Bacteria,2G74D@200795|Chloroflexi 200795|Chloroflexi C Fumarase C-terminus - - 4.2.1.2 ko:K01676,ko:K01678 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00173,M00374,M00620 R01082 RC00443 ko00000,ko00001,ko00002,ko01000 - - - Fumerase_C YYD2_k127_3736150_0 926569.ANT_30960 1.088e-122 402.0 COG1951@1|root,COG1951@2|Bacteria,2G6YI@200795|Chloroflexi 200795|Chloroflexi C Fumarate hydratase (Fumerase) - - 4.2.1.2 ko:K01676,ko:K01677 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00173,M00374,M00620 R01082 RC00443 ko00000,ko00001,ko00002,ko01000 - - - Fumerase YYD2_k127_3736150_2 383372.Rcas_0925 8.404e-98 325.0 COG1027@1|root,COG1027@2|Bacteria,2G5IV@200795|Chloroflexi,37644@32061|Chloroflexia 32061|Chloroflexia C PFAM fumarate lyase - - 4.2.1.2 ko:K01679 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211 M00009,M00011,M00173,M00376 R01082 RC00443 ko00000,ko00001,ko00002,ko01000 - - - FumaraseC_C,Lyase_1 YYD2_k127_3746717_0 96561.Dole_0995 1.917e-90 309.0 2CDI5@1|root,2Z7ZQ@2|Bacteria,1Q9TA@1224|Proteobacteria,42QB0@68525|delta/epsilon subdivisions,2WMJT@28221|Deltaproteobacteria,2MN1A@213118|Desulfobacterales 28221|Deltaproteobacteria - - - - - - - - - - - - - - - YYD2_k127_3746717_3 518766.Rmar_2366 2.645e-34 149.0 COG1574@1|root,COG1574@2|Bacteria,4NFMV@976|Bacteroidetes,1FIKX@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes S Amidohydrolase family - - - - - - - - - - - - Amidohydro_3 YYD2_k127_3746717_4 298653.Franean1_2466 1.341e-25 114.0 2EGQV@1|root,33AH0@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - YYD2_k127_3746717_1 679926.Mpet_0521 4.289e-58 213.0 COG1335@1|root,arCOG01943@2157|Archaea,2Y0WZ@28890|Euryarchaeota,2NA9S@224756|Methanomicrobia 224756|Methanomicrobia Q PFAM Isochorismatase - - - - - - - - - - - - Isochorismatase YYD2_k127_3746717_2 679926.Mpet_0520 4.512e-53 198.0 COG0492@1|root,arCOG01296@2157|Archaea,2XZBF@28890|Euryarchaeota 28890|Euryarchaeota O Pyridine nucleotide-disulphide oxidoreductase - - - - - - - - - - - - Pyr_redox_2,Pyr_redox_3 YYD2_k127_3747207_3 926569.ANT_29030 2.196e-13 71.0 2EAGR@1|root,334K0@2|Bacteria,2G730@200795|Chloroflexi 200795|Chloroflexi S PFAM zinc finger, SWIM domain protein - - - - - - - - - - - - SWIM YYD2_k127_3747207_2 1120973.AQXL01000072_gene611 1.635e-17 92.0 COG3291@1|root,COG3509@1|root,COG3291@2|Bacteria,COG3509@2|Bacteria,1UZP5@1239|Firmicutes,4HAWI@91061|Bacilli,278ZP@186823|Alicyclobacillaceae 91061|Bacilli Q Phospholipase/Carboxylesterase phaZ - - - - - - - - - - - CHB_HEX_C_1,Esterase_phd YYD2_k127_3747207_4 765420.OSCT_3202 1.321e-09 71.0 COG5617@1|root,COG5617@2|Bacteria,2GBIK@200795|Chloroflexi,3780M@32061|Chloroflexia 32061|Chloroflexia S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - YYD2_k127_3747207_0 926569.ANT_15760 1.203e-94 321.0 COG1376@1|root,COG1376@2|Bacteria 2|Bacteria D ErfK ybiS ycfS ynhG family protein - - - - - - - - - - - - YkuD YYD2_k127_3747207_1 1128421.JAGA01000002_gene1836 3.968e-69 242.0 COG2189@1|root,COG2189@2|Bacteria,2NP0F@2323|unclassified Bacteria 2|Bacteria L PFAM DNA methylase N-4 N-6 - - 2.1.1.72 ko:K00571,ko:K07316 - - - - ko00000,ko01000,ko02048 - - - Mrr_cat,N6_N4_Mtase YYD2_k127_3773607_0 926569.ANT_06600 7.105e-213 692.0 COG2203@1|root,COG5002@1|root,COG2203@2|Bacteria,COG5002@2|Bacteria,2G7NF@200795|Chloroflexi 200795|Chloroflexi T histidine kinase A domain protein - - - - - - - - - - - - GAF_2,HATPase_c,HisKA YYD2_k127_3782451_6 502025.Hoch_3072 3.999e-19 89.0 COG1070@1|root,COG1070@2|Bacteria,1MW4A@1224|Proteobacteria,42Q1B@68525|delta/epsilon subdivisions,2WKJH@28221|Deltaproteobacteria,2YU85@29|Myxococcales 28221|Deltaproteobacteria G FGGY family of carbohydrate kinases, N-terminal domain - - 2.7.1.17 ko:K00854 ko00040,ko01100,map00040,map01100 M00014 R01639 RC00002,RC00538 ko00000,ko00001,ko00002,ko01000 - - - FGGY_C,FGGY_N YYD2_k127_3782451_3 326427.Cagg_3745 1.235e-62 220.0 COG0494@1|root,COG0494@2|Bacteria 2|Bacteria L nUDIX hydrolase - - - - - - - - - - - - NUDIX YYD2_k127_3782451_4 63737.Npun_F1222 4.771e-28 130.0 COG1672@1|root,COG2319@1|root,COG1672@2|Bacteria,COG2319@2|Bacteria,1FZVW@1117|Cyanobacteria,1HINJ@1161|Nostocales 1117|Cyanobacteria L PFAM WD domain, G-beta repeat - - - - - - - - - - - - Peptidase_C14,WD40 YYD2_k127_3782451_1 926569.ANT_22140 2.083e-103 341.0 COG0479@1|root,COG0479@2|Bacteria,2G659@200795|Chloroflexi 200795|Chloroflexi C TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein - - 1.3.5.1,1.3.5.4 ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 - - - Fer2_3,Fer4_10,Fer4_8 YYD2_k127_3782451_0 926569.ANT_22150 1.271e-284 884.0 COG1053@1|root,COG1053@2|Bacteria,2G5YB@200795|Chloroflexi 200795|Chloroflexi C PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein - - 1.3.5.1,1.3.5.4 ko:K00239 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 - - - FAD_binding_2,Succ_DH_flav_C YYD2_k127_3782451_9 136273.GY22_10270 9.713e-05 50.0 COG2142@1|root,COG2142@2|Bacteria,2GNKE@201174|Actinobacteria,1W966@1268|Micrococcaceae 201174|Actinobacteria C Succinate dehydrogenase/Fumarate reductase transmembrane subunit sdhD - - ko:K00242 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173 R02164 RC00045 ko00000,ko00001,ko00002 - - - Sdh_cyt YYD2_k127_3782451_8 926569.ANT_22170 5.952e-08 59.0 COG2009@1|root,COG2009@2|Bacteria,2G7CW@200795|Chloroflexi 200795|Chloroflexi C succinate dehydrogenase, cytochrome - - - ko:K00241 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002 - - - Sdh_cyt YYD2_k127_3782451_5 330214.NIDE3890 5.739e-23 107.0 COG0723@1|root,COG0723@2|Bacteria,3J0TT@40117|Nitrospirae 40117|Nitrospirae C Rieske [2Fe-2S] domain - - 1.10.9.1 ko:K02636,ko:K03886 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00151,M00162 R03817,R08409 RC01002 ko00000,ko00001,ko00002,ko00194,ko01000 - - - Rieske YYD2_k127_3782451_2 330214.NIDE3889 2.835e-70 244.0 COG1290@1|root,COG2010@1|root,COG1290@2|Bacteria,COG2010@2|Bacteria,3J0Q6@40117|Nitrospirae 2|Bacteria C Cytochrome b/b6/petB qcrC - - ko:K00412,ko:K03888 ko00190,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016 M00151,M00152 - - ko00000,ko00001,ko00002,ko03029 - - - Cytochrom_B_C,Cytochrome_B,Cytochrome_CBB3 YYD2_k127_3782451_7 237368.SCABRO_01591 2.09e-16 92.0 COG1290@1|root,COG2010@1|root,COG1290@2|Bacteria,COG2010@2|Bacteria,2IX9E@203682|Planctomycetes 203682|Planctomycetes C Cytochrome b subunit of the bc complex - - - ko:K00412 ko00190,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016 M00151,M00152 - - ko00000,ko00001,ko00002,ko03029 - - - Cytochrom_B_C,Cytochrom_B_N_2,Cytochrom_C,Cytochrome_B YYD2_k127_3798742_1 926550.CLDAP_10160 2.6e-123 402.0 COG0399@1|root,COG0399@2|Bacteria,2G7WW@200795|Chloroflexi 200795|Chloroflexi E DegT/DnrJ/EryC1/StrS aminotransferase family - - - - - - - - - - - - DegT_DnrJ_EryC1 YYD2_k127_3798742_3 926569.ANT_11070 9.247e-84 288.0 COG2971@1|root,COG2971@2|Bacteria,2G764@200795|Chloroflexi 200795|Chloroflexi G BadF/BadG/BcrA/BcrD ATPase family - - - - - - - - - - - - BcrAD_BadFG YYD2_k127_3798742_0 926569.ANT_11080 9.843e-174 554.0 COG1486@1|root,COG1486@2|Bacteria,2G6IX@200795|Chloroflexi 200795|Chloroflexi G Family 4 glycosyl hydrolase - - 3.2.1.86 ko:K01222 ko00010,ko00500,map00010,map00500 - R00839,R05133,R05134 RC00049,RC00171,RC00714 ko00000,ko00001,ko01000 - GT4 - Glyco_hydro_4,Glyco_hydro_4C YYD2_k127_3798742_2 1121381.JNIV01000214_gene3716 1.927e-115 387.0 COG2211@1|root,COG2211@2|Bacteria,1WIWY@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus G MFS/sugar transport protein - - - ko:K03292 - - - - ko00000 2.A.2 - - MFS_2 YYD2_k127_3798742_5 1288963.ADIS_3302 1.276e-34 149.0 COG3356@1|root,COG3356@2|Bacteria,4NU9C@976|Bacteroidetes,47VT1@768503|Cytophagia 976|Bacteroidetes S Neutral/alkaline non-lysosomal ceramidase, N-terminal - - - - - - - - - - - - Ceramidase_alk YYD2_k127_3798742_4 1173022.Cri9333_3939 9.589e-55 200.0 COG2211@1|root,COG2211@2|Bacteria,1GBZ6@1117|Cyanobacteria,1HF47@1150|Oscillatoriales 1117|Cyanobacteria G MFS/sugar transport protein - - - ko:K03292 - - - - ko00000 2.A.2 - - MFS_2 YYD2_k127_3804780_0 926569.ANT_25960 1.123e-162 516.0 COG0320@1|root,COG0320@2|Bacteria,2G5MH@200795|Chloroflexi 200795|Chloroflexi H Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives lipA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 ko:K03644 ko00785,ko01100,map00785,map01100 - R07767,R07768 RC01978 ko00000,ko00001,ko01000 - - - LIAS_N,Radical_SAM YYD2_k127_3804780_2 1167006.UWK_00322 1.599e-68 236.0 COG1592@1|root,COG1592@2|Bacteria,1R9WG@1224|Proteobacteria,42RFX@68525|delta/epsilon subdivisions,2WN92@28221|Deltaproteobacteria,2MJZ5@213118|Desulfobacterales 28221|Deltaproteobacteria C PFAM Rubrerythrin - - - - - - - - - - - - Rubrerythrin YYD2_k127_3804780_4 765420.OSCT_0159 1.219e-50 188.0 COG0637@1|root,COG0637@2|Bacteria,2G6ZZ@200795|Chloroflexi,377EF@32061|Chloroflexia 32061|Chloroflexia S TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - 5.4.2.6 ko:K01838 ko00500,map00500 - R02728,R11310 RC00408 ko00000,ko00001,ko01000 - - - HAD_2 YYD2_k127_3804780_5 926569.ANT_07530 7.058e-46 176.0 COG0204@1|root,COG0204@2|Bacteria 2|Bacteria I Acyl-transferase plsC - 2.3.1.51 ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R02241,R09381 RC00004,RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Acyltransferase YYD2_k127_3804780_3 926569.ANT_04570 9.772e-63 220.0 298YA@1|root,2ZW25@2|Bacteria,2G6UQ@200795|Chloroflexi 200795|Chloroflexi S Protein of unknown function (DUF3090) - - - - - - - - - - - - DUF3090 YYD2_k127_3804780_7 926569.ANT_30930 3.115e-14 76.0 COG3695@1|root,COG3695@2|Bacteria 2|Bacteria L enzyme binding ogt - 2.1.1.63 ko:K00567,ko:K07443 - - - - ko00000,ko01000,ko03400 - - - DNA_binding_1,YjbR YYD2_k127_3804780_1 926569.ANT_18930 6.544e-89 314.0 COG0810@1|root,COG0810@2|Bacteria 2|Bacteria M energy transducer activity ftsZ - - ko:K03531,ko:K03832 ko04112,map04112 - - - ko00000,ko00001,ko02000,ko02048,ko03036,ko04812 2.C.1.1 - - DUF3747,DUF4173,FtsK_4TM,HAMP,HATPase_c,HisKA,TonB_C YYD2_k127_3804780_6 765420.OSCT_2357 5.719e-27 111.0 COG0695@1|root,COG0695@2|Bacteria 2|Bacteria O Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins mrx1 - 1.20.4.3 ko:K18917 - - - - ko00000,ko01000 - - - Glutaredoxin YYD2_k127_3805815_0 926569.ANT_14080 0.0 1310.0 COG0542@1|root,COG0542@2|Bacteria,2G5QU@200795|Chloroflexi 200795|Chloroflexi O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE clpB - - ko:K03695 ko04213,map04213 - - - ko00000,ko00001,ko03110 - - - AAA,AAA_2,ClpB_D2-small,Clp_N YYD2_k127_3805815_2 856793.MICA_669 2.537e-27 116.0 COG1198@1|root,COG2852@1|root,COG1198@2|Bacteria,COG2852@2|Bacteria,1MUUZ@1224|Proteobacteria,2TQTQ@28211|Alphaproteobacteria,4BPIG@82117|unclassified Alphaproteobacteria 28211|Alphaproteobacteria L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA priA - - ko:K04066 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C YYD2_k127_3805815_1 7739.XP_002589830.1 3.813e-181 578.0 COG1012@1|root,KOG2450@2759|Eukaryota,38CQ7@33154|Opisthokonta,3BH9X@33208|Metazoa,3CZ2T@33213|Bilateria,48BFC@7711|Chordata 33208|Metazoa C Aldehyde dehydrogenase 16 family member A1 aldh16a1 - 1.2.1.3 ko:K00128 ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130 M00135 R00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146 RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500 ko00000,ko00001,ko00002,ko01000 - - - Aldedh YYD2_k127_3823013_3 926569.ANT_00100 4.09e-51 186.0 COG5658@1|root,COG5658@2|Bacteria,2G714@200795|Chloroflexi 200795|Chloroflexi S SdpI/YhfL protein family - - - - - - - - - - - - DUF1648,SdpI YYD2_k127_3823013_1 926569.ANT_00110 3.289e-91 312.0 COG1131@1|root,COG1131@2|Bacteria,2G6HA@200795|Chloroflexi 200795|Chloroflexi V PFAM ABC transporter related - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran,DUF4162 YYD2_k127_3823013_2 926569.ANT_00120 1.309e-69 244.0 COG1668@1|root,COG1668@2|Bacteria,2G76A@200795|Chloroflexi 200795|Chloroflexi CP ABC-2 family transporter protein - - - - - - - - - - - - ABC2_membrane_2 YYD2_k127_3823013_4 326427.Cagg_0625 8.539e-47 179.0 COG1266@1|root,COG1266@2|Bacteria,2G912@200795|Chloroflexi,377V6@32061|Chloroflexia 32061|Chloroflexia S PFAM Abortive infection protein - - - - - - - - - - - - Abi YYD2_k127_3823013_0 926569.ANT_27130 1.13e-137 447.0 COG0592@1|root,COG0592@2|Bacteria,2G641@200795|Chloroflexi 200795|Chloroflexi L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria dnaN - 2.7.7.7 ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_beta,DNA_pol3_beta_2,DNA_pol3_beta_3 YYD2_k127_3824380_1 1521187.JPIM01000003_gene2974 1.821e-133 433.0 COG4608@1|root,COG4608@2|Bacteria,2G5R5@200795|Chloroflexi,3754I@32061|Chloroflexia 32061|Chloroflexia P TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit - - - ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00439 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 - - ABC_tran,oligo_HPY YYD2_k127_3824380_2 926550.CLDAP_11120 3.025e-127 415.0 COG0444@1|root,COG0444@2|Bacteria,2G61B@200795|Chloroflexi 200795|Chloroflexi P Belongs to the ABC transporter superfamily - - - ko:K02031,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 - - ABC_tran,oligo_HPY YYD2_k127_3824380_4 324602.Caur_0788 2.759e-79 275.0 COG1173@1|root,COG1173@2|Bacteria,2G63I@200795|Chloroflexi,376Z2@32061|Chloroflexia 32061|Chloroflexia EP PFAM binding-protein-dependent transport systems inner membrane component - - - ko:K02034 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - BPD_transp_1,OppC_N YYD2_k127_3824380_5 1382356.JQMP01000003_gene2440 4.681e-71 252.0 COG0601@1|root,COG0601@2|Bacteria,2GA2P@200795|Chloroflexi,27YUQ@189775|Thermomicrobia 189775|Thermomicrobia EP Binding-protein-dependent transport system inner membrane component - - - ko:K02033 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - BPD_transp_1 YYD2_k127_3824380_6 111781.Lepto7376_1698 6.186e-64 240.0 COG0747@1|root,COG0747@2|Bacteria,1G0S3@1117|Cyanobacteria,1H75X@1150|Oscillatoriales 1117|Cyanobacteria E ABC-type dipeptide transport system periplasmic component - - - ko:K02035 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - SBP_bac_5 YYD2_k127_3824380_7 926569.ANT_06250 6.573e-54 194.0 COG1468@1|root,COG1468@2|Bacteria,2G6VA@200795|Chloroflexi 200795|Chloroflexi L Domain of unknown function DUF83 - - 3.1.12.1 ko:K07464 - - - - ko00000,ko01000,ko02048 - - - Cas_Cas4 YYD2_k127_3824380_10 335543.Sfum_1027 1.266e-12 79.0 COG0265@1|root,COG0265@2|Bacteria 2|Bacteria O serine-type endopeptidase activity - - - - - - - - - - - - COP23,N-glycanase_C,Trypsin_2 YYD2_k127_3824380_3 926569.ANT_00510 1.909e-83 285.0 COG0061@1|root,COG0061@2|Bacteria,2G6NK@200795|Chloroflexi 200795|Chloroflexi F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP nadK - 2.7.1.23 ko:K00858 ko00760,ko01100,map00760,map01100 - R00104 RC00002,RC00078 ko00000,ko00001,ko01000 - - - NAD_kinase YYD2_k127_3824380_8 926569.ANT_00520 2.257e-35 141.0 COG3063@1|root,COG3063@2|Bacteria,2G79Z@200795|Chloroflexi 200795|Chloroflexi NU Type IV pilus biogenesis stability protein PilW - - - - - - - - - - - - zf-B_box YYD2_k127_3824380_0 926569.ANT_00530 2.546e-199 638.0 COG0497@1|root,COG0497@2|Bacteria,2G5V1@200795|Chloroflexi 200795|Chloroflexi L May be involved in recombinational repair of damaged DNA recN - - ko:K03631 - - - - ko00000,ko03400 - - - AAA_23,SMC_N YYD2_k127_3832092_0 926569.ANT_29200 6.308e-226 719.0 COG4412@1|root,COG4412@2|Bacteria,2G622@200795|Chloroflexi 200795|Chloroflexi S Immune inhibitor A peptidase M6 - - - - - - - - - - - - Peptidase_M6 YYD2_k127_3832092_3 1220534.B655_1748 2.251e-34 135.0 COG1917@1|root,arCOG03004@2157|Archaea,2XYUR@28890|Euryarchaeota,23P5U@183925|Methanobacteria 183925|Methanobacteria S Cupin domain - - - - - - - - - - - - Cupin_2 YYD2_k127_3832092_4 211165.AJLN01000116_gene3394 2.819e-18 88.0 COG0607@1|root,COG0607@2|Bacteria,1G7VW@1117|Cyanobacteria,1JM08@1189|Stigonemataceae 1117|Cyanobacteria P Rhodanese Homology Domain pspE - - - - - - - - - - - Rhodanese YYD2_k127_3832092_2 926569.ANT_05030 7.179e-35 141.0 COG4843@1|root,COG4843@2|Bacteria 2|Bacteria S Uncharacterized protein conserved in bacteria (DUF2179) - - - - - - - - - - - - DUF2179 YYD2_k127_3832092_1 926569.ANT_05040 1.688e-169 540.0 COG0058@1|root,COG0058@2|Bacteria,2G5KG@200795|Chloroflexi 200795|Chloroflexi G PFAM glycosyl transferase, family 35 glgP - 2.4.1.1 ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 - R02111 - ko00000,ko00001,ko01000 - GT35 - DUF3417,Phosphorylase YYD2_k127_3872906_2 1499967.BAYZ01000161_gene384 3.5e-98 331.0 COG1814@1|root,COG1814@2|Bacteria,2NP4E@2323|unclassified Bacteria 2|Bacteria S VIT family - - - - - - - - - - - - Rubrerythrin,VIT1 YYD2_k127_3872906_3 1437425.CSEC_2022 5.788e-38 146.0 COG0662@1|root,COG0662@2|Bacteria 2|Bacteria G Cupin 2, conserved barrel domain protein yrkC - - - - - - - - - - - Cupin_2 YYD2_k127_3872906_0 926569.ANT_16800 2.535e-237 741.0 COG1003@1|root,COG1003@2|Bacteria,2G5MU@200795|Chloroflexi 200795|Chloroflexi E The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor gcvPB - 1.4.4.2 ko:K00281,ko:K00283 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 M00532 R01221,R03425 RC00022,RC00929,RC02834,RC02880 ko00000,ko00001,ko00002,ko01000 - - - GDC-P YYD2_k127_3872906_1 926569.ANT_16790 2.138e-194 617.0 COG0403@1|root,COG0403@2|Bacteria,2G5NI@200795|Chloroflexi 200795|Chloroflexi E The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor gcvPA - 1.4.4.2 ko:K00282 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 - R01221,R03425 RC00022,RC00929,RC02834,RC02880 ko00000,ko00001,ko01000 - - - GDC-P YYD2_k127_3872906_4 926569.ANT_16780 1.95e-32 131.0 COG0509@1|root,COG0509@2|Bacteria,2G6XE@200795|Chloroflexi 200795|Chloroflexi E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein gcvH - - ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 M00532 R01221 RC00022,RC02834 ko00000,ko00001,ko00002 - - - GCV_H YYD2_k127_3872906_5 926569.ANT_20810 8.377e-17 83.0 COG4818@1|root,COG4818@2|Bacteria,2G9PA@200795|Chloroflexi 200795|Chloroflexi S Domain of unknown function (DUF4870) - - - - - - - - - - - - DUF4870 YYD2_k127_3907550_2 926569.ANT_27260 4.425e-41 161.0 COG5427@1|root,COG5427@2|Bacteria,2G6AA@200795|Chloroflexi 200795|Chloroflexi S Uncharacterized membrane protein (DUF2298) - - - - - - - - - - - - DUF2298 YYD2_k127_3907550_3 306281.AJLK01000122_gene417 1.25e-32 130.0 COG3502@1|root,COG3502@2|Bacteria,1G99N@1117|Cyanobacteria,1JIXC@1189|Stigonemataceae 1117|Cyanobacteria S Protein of unknown function (DUF952) - - 2.5.1.18 ko:K00799 ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418 - R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905 RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944 ko00000,ko00001,ko01000,ko02000 1.A.12.2.2,1.A.12.3.2 - - DUF952,GST_C_2,GST_N_3 YYD2_k127_3907550_0 926569.ANT_15860 0.0 1369.0 COG1807@1|root,COG5427@1|root,COG1807@2|Bacteria,COG5427@2|Bacteria,2G5UJ@200795|Chloroflexi 200795|Chloroflexi M Tetratricopeptide TPR_2 repeat protein - - - - - - - - - - - - DUF2298,PMT_2,TPR_16,TPR_19,TPR_8 YYD2_k127_3907550_1 926569.ANT_15870 1.996e-46 176.0 COG1287@1|root,COG1287@2|Bacteria 2|Bacteria S oligosaccharyl transferase activity - - 2.4.99.18 ko:K07151 ko00510,ko00513,ko01100,ko04141,map00510,map00513,map01100,map04141 M00072 R04216,R05976 RC00005,RC00482 ko00000,ko00001,ko00002,ko01000,ko01003 - GT66 - PMT_2 YYD2_k127_3910672_0 926569.ANT_27260 7.018e-110 381.0 COG5427@1|root,COG5427@2|Bacteria,2G6AA@200795|Chloroflexi 200795|Chloroflexi S Uncharacterized membrane protein (DUF2298) - - - - - - - - - - - - DUF2298 YYD2_k127_3910672_1 926569.ANT_15850 1.413e-19 98.0 COG4745@1|root,COG4745@2|Bacteria,2G9RB@200795|Chloroflexi 200795|Chloroflexi O Dolichyl-phosphate-mannose-protein mannosyltransferase - - - - - - - - - - - - - YYD2_k127_3921005_0 926569.ANT_16230 6.379e-99 329.0 COG0621@1|root,COG0621@2|Bacteria,2G5UI@200795|Chloroflexi 200795|Chloroflexi J modification enzyme, MiaB family - - 2.8.4.5 ko:K18707 - - R10649 RC00003,RC03221 ko00000,ko01000,ko03016 - - - Radical_SAM,UPF0004 YYD2_k127_3921005_2 1167006.UWK_03400 0.0004793 45.0 COG0457@1|root,COG0457@2|Bacteria,1MXMD@1224|Proteobacteria,42P80@68525|delta/epsilon subdivisions,2WMCB@28221|Deltaproteobacteria 28221|Deltaproteobacteria S TIGRFAM PEP-CTERM system TPR-repeat lipoprotein - - - - - - - - - - - - TPR_19,TPR_6,TPR_8 YYD2_k127_3931123_0 926569.ANT_13210 4.44e-229 715.0 COG2403@1|root,COG2403@2|Bacteria,2G7VS@200795|Chloroflexi 200795|Chloroflexi S cyclic 2,3-diphosphoglycerate synthetase activity - - - - - - - - - - - - - YYD2_k127_3931123_2 1521187.JPIM01000023_gene772 1.198e-95 325.0 COG0624@1|root,COG0624@2|Bacteria,2G63E@200795|Chloroflexi 200795|Chloroflexi E peptidase dimerisation domain protein - - - - - - - - - - - - M20_dimer,Peptidase_M20,Peptidase_M28 YYD2_k127_3931123_3 926569.ANT_16140 1.569e-80 280.0 COG0524@1|root,COG0524@2|Bacteria,2G9QW@200795|Chloroflexi 200795|Chloroflexi G pfkB family carbohydrate kinase - - - - - - - - - - - - PfkB YYD2_k127_3931123_4 304371.MCP_2616 4.393e-43 173.0 COG0642@1|root,arCOG02338@1|root,arCOG02338@2157|Archaea,arCOG07619@2157|Archaea,2Y7TB@28890|Euryarchaeota,2NBMD@224756|Methanomicrobia 224756|Methanomicrobia T GAF domain - - - - - - - - - - - - GAF_2,HATPase_c,HisKA YYD2_k127_3931123_1 926569.ANT_12130 3.303e-177 559.0 COG1260@1|root,COG1260@2|Bacteria,2G5YH@200795|Chloroflexi 200795|Chloroflexi I Myo-inositol-1-phosphate synthase, GAPDH domain protein - - 5.5.1.4 ko:K01858 ko00521,ko00562,ko01100,ko01130,map00521,map00562,map01100,map01130 - R07324 RC01804 ko00000,ko00001,ko01000 - - - Inos-1-P_synth YYD2_k127_3937355_2 926569.ANT_06480 3.844e-112 371.0 COG0381@1|root,COG0381@2|Bacteria 2|Bacteria M UDP-N-acetylglucosamine 2-epimerase activity - - - - - - - - - - - - - YYD2_k127_3937355_4 272558.10176004 5.583e-32 136.0 COG0457@1|root,COG0457@2|Bacteria,1U9ZE@1239|Firmicutes,4IK7A@91061|Bacilli,1ZFKG@1386|Bacillus 91061|Bacilli S Sulfotransferase domain - - - - - - - - - - - - Sulfotransfer_1 YYD2_k127_3937355_1 926569.ANT_06470 1.358e-130 422.0 COG2089@1|root,COG2089@2|Bacteria,2G8IV@200795|Chloroflexi 200795|Chloroflexi M NeuB family - - 2.5.1.56 ko:K01654 ko00520,ko01100,map00520,map01100 - R01804,R04435 RC00159 ko00000,ko00001,ko01000 - - - NeuB YYD2_k127_3937355_0 926569.ANT_06460 2.679e-160 514.0 COG1083@1|root,COG1778@1|root,COG1083@2|Bacteria,COG1778@2|Bacteria 2|Bacteria S 3-deoxy-manno-octulosonate-8-phosphatase activity neuA - 2.7.7.43,3.1.3.45 ko:K00983,ko:K03270 ko00520,ko00540,ko01100,map00520,map00540,map01100 M00063 R01117,R03350,R04215 RC00017,RC00152 ko00000,ko00001,ko00002,ko01000,ko01005 - - - CTP_transf_3,Hydrolase_3 YYD2_k127_3937355_3 926569.ANT_06450 3.349e-107 355.0 COG1028@1|root,COG1028@2|Bacteria,2G6RP@200795|Chloroflexi 200795|Chloroflexi IQ Enoyl-(Acyl carrier protein) reductase - - 1.1.1.127 ko:K00065 ko00040,map00040 - R01542 RC00089 ko00000,ko00001,ko01000 - - - adh_short_C2 YYD2_k127_3937355_5 1123008.KB905700_gene2079 4.622e-17 95.0 28PN7@1|root,2ZCB2@2|Bacteria,4NJSS@976|Bacteroidetes,2FTMW@200643|Bacteroidia,22Y3X@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - YYD2_k127_3937355_6 926550.CLDAP_18760 4.024e-13 69.0 COG0529@1|root,COG2046@1|root,COG0529@2|Bacteria,COG2046@2|Bacteria,2G7JD@200795|Chloroflexi 200795|Chloroflexi H Catalyzes the synthesis of activated sulfate cysC - 2.7.7.4 ko:K00958 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 M00176,M00596 R00529,R04929 RC02809,RC02889 ko00000,ko00001,ko00002,ko01000 - - - APS_kinase,ATP-sulfurylase,PUA_2 YYD2_k127_3961190_4 247490.KSU1_D0551 1.939e-24 115.0 28MCN@1|root,2ZAQR@2|Bacteria,2J327@203682|Planctomycetes 203682|Planctomycetes - - - - - - - - - - - - - - - YYD2_k127_3961190_1 861299.J421_2299 1.656e-59 216.0 COG4127@1|root,COG4127@2|Bacteria,1ZV3T@142182|Gemmatimonadetes 142182|Gemmatimonadetes L Restriction endonuclease - - - ko:K07448 - - - - ko00000,ko02048 - - - Mrr_cat YYD2_k127_3961190_7 573063.Metin_0662 2.915e-06 59.0 COG0457@1|root,arCOG03038@2157|Archaea,2XUNW@28890|Euryarchaeota,23R54@183939|Methanococci 183939|Methanococci S SMART Tetratricopeptide repeat - - - - - - - - - - - - TPR_1,TPR_8 YYD2_k127_3961190_3 765420.OSCT_1712 1.226e-33 147.0 COG2203@1|root,COG4585@1|root,COG2203@2|Bacteria,COG4585@2|Bacteria,2G8GW@200795|Chloroflexi,3776B@32061|Chloroflexia 32061|Chloroflexia T histidine kinase, dimerisation and phosphoacceptor region - - - - - - - - - - - - GAF_2,HATPase_c,HisKA_3 YYD2_k127_3961190_2 926550.CLDAP_08440 3.647e-56 206.0 COG2197@1|root,COG2197@2|Bacteria,2G6T1@200795|Chloroflexi 200795|Chloroflexi K Two component transcriptional regulator, LuxR family - - - - - - - - - - - - GerE,Response_reg YYD2_k127_3961190_5 926569.ANT_23300 6.807e-23 105.0 COG2001@1|root,COG2001@2|Bacteria,2G6ZC@200795|Chloroflexi 200795|Chloroflexi K Belongs to the MraZ family mraZ - - ko:K03925 - - - - ko00000 - - - MraZ YYD2_k127_3961190_0 926550.CLDAP_08440 1.415e-59 213.0 COG2197@1|root,COG2197@2|Bacteria,2G6T1@200795|Chloroflexi 200795|Chloroflexi K Two component transcriptional regulator, LuxR family - - - - - - - - - - - - GerE,Response_reg YYD2_k127_3961190_6 63737.Npun_R5540 2.571e-18 94.0 COG4928@1|root,COG4928@2|Bacteria,1G0KU@1117|Cyanobacteria,1HM31@1161|Nostocales 1117|Cyanobacteria S Pfam:Arch_ATPase - - - - - - - - - - - - AAA_16 YYD2_k127_3974867_10 1278073.MYSTI_03346 8.462e-69 238.0 COG1070@1|root,COG1070@2|Bacteria,1MW4A@1224|Proteobacteria,42Q1B@68525|delta/epsilon subdivisions,2WKJH@28221|Deltaproteobacteria 28221|Deltaproteobacteria G FGGY family of carbohydrate kinases, N-terminal domain - - 2.7.1.17 ko:K00854 ko00040,ko01100,map00040,map01100 M00014 R01639 RC00002,RC00538 ko00000,ko00001,ko00002,ko01000 - - - FGGY_C,FGGY_N YYD2_k127_3974867_2 45157.CMT631CT 1.923e-163 528.0 COG0076@1|root,KOG1383@2759|Eukaryota 2759|Eukaryota E sphinganine-1-phosphate aldolase activity SGPL1 GO:0000003,GO:0001501,GO:0001553,GO:0001568,GO:0001570,GO:0001655,GO:0001667,GO:0001822,GO:0001944,GO:0002376,GO:0002520,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005938,GO:0006082,GO:0006629,GO:0006631,GO:0006643,GO:0006665,GO:0006672,GO:0006807,GO:0006873,GO:0006874,GO:0006875,GO:0006915,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006996,GO:0007010,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007276,GO:0007283,GO:0007525,GO:0007527,GO:0007548,GO:0008064,GO:0008117,GO:0008150,GO:0008152,GO:0008202,GO:0008209,GO:0008210,GO:0008219,GO:0008406,GO:0008584,GO:0008585,GO:0008610,GO:0009056,GO:0009058,GO:0009267,GO:0009314,GO:0009416,GO:0009453,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009653,GO:0009791,GO:0009887,GO:0009987,GO:0009991,GO:0010171,GO:0010646,GO:0010761,GO:0010817,GO:0012501,GO:0012505,GO:0016020,GO:0016021,GO:0016042,GO:0016043,GO:0016477,GO:0016829,GO:0016830,GO:0016832,GO:0019722,GO:0019725,GO:0019752,GO:0019932,GO:0019953,GO:0022414,GO:0022602,GO:0023052,GO:0030003,GO:0030029,GO:0030036,GO:0030097,GO:0030148,GO:0030149,GO:0030154,GO:0030176,GO:0030435,GO:0030587,GO:0030832,GO:0030833,GO:0031156,GO:0031157,GO:0031158,GO:0031224,GO:0031227,GO:0031272,GO:0031273,GO:0031275,GO:0031276,GO:0031344,GO:0031345,GO:0031667,GO:0031668,GO:0031669,GO:0031984,GO:0032101,GO:0032104,GO:0032107,GO:0032271,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032541,GO:0032787,GO:0032956,GO:0032970,GO:0033043,GO:0033327,GO:0033554,GO:0034641,GO:0034754,GO:0035239,GO:0035295,GO:0035556,GO:0040008,GO:0040011,GO:0040014,GO:0042175,GO:0042221,GO:0042330,GO:0042331,GO:0042445,GO:0042592,GO:0042594,GO:0042698,GO:0042742,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043436,GO:0043603,GO:0043900,GO:0043934,GO:0044087,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0044703,GO:0045137,GO:0046466,GO:0046467,GO:0046545,GO:0046546,GO:0046660,GO:0046661,GO:0046956,GO:0048008,GO:0048232,GO:0048471,GO:0048511,GO:0048513,GO:0048514,GO:0048519,GO:0048523,GO:0048534,GO:0048583,GO:0048608,GO:0048609,GO:0048638,GO:0048646,GO:0048705,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050830,GO:0050896,GO:0051128,GO:0051129,GO:0051179,GO:0051239,GO:0051493,GO:0051674,GO:0051703,GO:0051704,GO:0051707,GO:0051716,GO:0052128,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0060021,GO:0060176,GO:0060322,GO:0060323,GO:0060324,GO:0060325,GO:0060491,GO:0061061,GO:0061458,GO:0065007,GO:0065008,GO:0071496,GO:0071704,GO:0071782,GO:0071840,GO:0071944,GO:0072001,GO:0072358,GO:0072359,GO:0072503,GO:0072507,GO:0080134,GO:0080135,GO:0090066,GO:0090702,GO:0097038,GO:0097190,GO:0098542,GO:0098771,GO:0098827,GO:0099120,GO:0099568,GO:0110053,GO:0120032,GO:0120033,GO:0120035,GO:1901360,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1902903 4.1.2.27 ko:K01634,ko:K20704 ko00600,ko01100,ko04071,map00600,map01100,map04071 M00100 R02464,R06516 RC00264,RC00721,RC01266 ko00000,ko00001,ko00002,ko01000,ko04131 - - - Pyridoxal_deC YYD2_k127_3974867_4 926569.ANT_00500 1.338e-123 410.0 COG2211@1|root,COG2211@2|Bacteria,2G6B9@200795|Chloroflexi 200795|Chloroflexi G PFAM PUCC protein - - - ko:K08226 - - - - ko00000,ko02000 2.A.1.41 - - PUCC YYD2_k127_3974867_14 1382306.JNIM01000001_gene144 6.997e-28 120.0 COG2452@1|root,COG2452@2|Bacteria,2G789@200795|Chloroflexi 200795|Chloroflexi L PFAM regulatory protein, MerR - - - - - - - - - - - - HTH_17 YYD2_k127_3974867_15 926569.ANT_30450 1.629e-25 114.0 28NSZ@1|root,337UE@2|Bacteria,2GA9H@200795|Chloroflexi 200795|Chloroflexi - - - - - - - - - - - - - - - YYD2_k127_3974867_13 926569.ANT_30440 9.927e-53 203.0 COG1466@1|root,COG1466@2|Bacteria,2G6XX@200795|Chloroflexi 200795|Chloroflexi L TIGRFAM DNA polymerase III, delta' subunit holA - 2.7.7.7 ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_delta YYD2_k127_3974867_8 926550.CLDAP_16290 1.119e-74 260.0 COG2301@1|root,COG2301@2|Bacteria,2G6EA@200795|Chloroflexi 200795|Chloroflexi G Belongs to the HpcH HpaI aldolase family - GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006107,GO:0008150,GO:0008152,GO:0009987,GO:0015977,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0043167,GO:0043169,GO:0043427,GO:0043436,GO:0043648,GO:0044237,GO:0044281,GO:0046872,GO:0047777,GO:0050083,GO:0071704 4.1.3.24,4.1.3.25,4.1.3.34 ko:K01644,ko:K08691 ko00630,ko00660,ko00680,ko00720,ko01120,ko01200,ko02020,map00630,map00660,map00680,map00720,map01120,map01200,map02020 M00346,M00373,M00376 R00237,R00362,R00473,R00934 RC00067,RC00307,RC00308,RC00311,RC00407,RC00502,RC01118,RC01205 ko00000,ko00001,ko00002,ko01000 - - - HpcH_HpaI YYD2_k127_3974867_6 1480694.DC28_04735 8.728e-95 324.0 COG0454@1|root,COG0456@2|Bacteria 2|Bacteria K acetyltransferase - - - - - - - - - - - - - YYD2_k127_3974867_16 1223544.GSI01S_31_00260 1.301e-14 81.0 COG0748@1|root,COG0748@2|Bacteria,2IIRT@201174|Actinobacteria,4GEAC@85026|Gordoniaceae 201174|Actinobacteria P Pfam:DUF385 - - - - - - - - - - - - F420H2_quin_red YYD2_k127_3974867_11 1198452.Jab_2c34270 1.516e-59 215.0 COG1028@1|root,COG1028@2|Bacteria,1MUFX@1224|Proteobacteria,2VMB3@28216|Betaproteobacteria,4779T@75682|Oxalobacteraceae 28216|Betaproteobacteria IQ KR domain - - 1.1.1.100 ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short_C2 YYD2_k127_3974867_3 926569.ANT_03690 2.563e-136 452.0 COG2234@1|root,COG2234@2|Bacteria 2|Bacteria DZ aminopeptidase activity - - 3.4.11.10,3.4.11.24,3.4.11.6 ko:K19701,ko:K19702 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M28 YYD2_k127_3974867_9 402881.Plav_0870 2.489e-73 257.0 COG0657@1|root,COG0657@2|Bacteria,1RD8A@1224|Proteobacteria,2U1B8@28211|Alphaproteobacteria 28211|Alphaproteobacteria I Alpha beta hydrolase - - 3.1.1.83 ko:K14731 ko00903,ko00930,ko01220,map00903,map00930,map01220 - R03751,R06390,R06391,R06392,R06393 RC00713,RC00983,RC01505 ko00000,ko00001,ko01000 - - - Abhydrolase_3 YYD2_k127_3974867_17 158500.BV97_04574 9.965e-07 56.0 COG1846@1|root,COG1846@2|Bacteria,1N4C0@1224|Proteobacteria,2UE5V@28211|Alphaproteobacteria,2K5X5@204457|Sphingomonadales 204457|Sphingomonadales K helix_turn_helix multiple antibiotic resistance protein - - - - - - - - - - - - MarR,MarR_2 YYD2_k127_3974867_1 1410653.JHVC01000029_gene1164 5.056e-255 806.0 COG1132@1|root,COG1132@2|Bacteria,1TP0B@1239|Firmicutes,247T8@186801|Clostridia,36EMB@31979|Clostridiaceae 186801|Clostridia V ABC transporter - - - ko:K06147 - - - - ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 - - ABC_membrane,ABC_tran YYD2_k127_3974867_0 580327.Tthe_2605 1.399e-283 883.0 COG1132@1|root,COG1132@2|Bacteria,1TP0B@1239|Firmicutes,247Q0@186801|Clostridia,42F44@68295|Thermoanaerobacterales 186801|Clostridia V ABC transporter, transmembrane region - - - ko:K06147 - - - - ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 - - ABC_membrane,ABC_tran YYD2_k127_3974867_7 485913.Krac_5673 3.424e-90 301.0 COG0262@1|root,COG0262@2|Bacteria,2G8UG@200795|Chloroflexi 200795|Chloroflexi H PFAM bifunctional deaminase-reductase domain protein - - - - - - - - - - - - RibD_C YYD2_k127_3974867_5 1128421.JAGA01000003_gene3550 3.205e-123 404.0 COG0277@1|root,COG0277@2|Bacteria,2NQTQ@2323|unclassified Bacteria 2|Bacteria C Berberine and berberine like - - - - - - - - - - - - BBE,FAD_binding_4 YYD2_k127_3994800_0 926569.ANT_10460 6.809e-209 657.0 COG1008@1|root,COG1008@2|Bacteria,2G5VU@200795|Chloroflexi 200795|Chloroflexi C TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M - - 1.6.5.3 ko:K00342 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q5_N,Proton_antipo_M YYD2_k127_3994800_1 357808.RoseRS_2999 2.004e-144 473.0 COG1008@1|root,COG1008@2|Bacteria,2G5VU@200795|Chloroflexi,374ZX@32061|Chloroflexia 32061|Chloroflexia C TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M - - 1.6.5.3 ko:K00342 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Proton_antipo_M YYD2_k127_3994800_2 926569.ANT_10480 2.524e-62 221.0 COG1007@1|root,COG1007@2|Bacteria,2G5ZK@200795|Chloroflexi 200795|Chloroflexi C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoN - 1.6.5.3 ko:K00343 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q5_N,Proton_antipo_M YYD2_k127_4010857_8 1121377.KB906402_gene3344 2.175e-11 75.0 COG3187@1|root,COG3187@2|Bacteria 2|Bacteria O response to heat - - - - - - - - - - - - Lipoprotein_21,META YYD2_k127_4010857_9 1042377.AFPJ01000036_gene1228 1.36e-05 56.0 COG4733@1|root,COG4733@2|Bacteria 2|Bacteria S cellulase activity - - - - - - - - - - - - Laminin_G_3,Phage-tail_3,SLH,fn3 YYD2_k127_4010857_3 1121377.KB906415_gene4061 1.295e-80 280.0 COG2021@1|root,COG2021@2|Bacteria 2|Bacteria E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine - - 3.4.11.5 ko:K01259 ko00330,map00330 - R00135 - ko00000,ko00001,ko01000,ko01002 - - - Abhydrolase_1 YYD2_k127_4010857_0 926569.ANT_15490 6.805e-294 912.0 COG1217@1|root,COG1217@2|Bacteria,2G5NQ@200795|Chloroflexi 200795|Chloroflexi T elongation factor Tu domain 2 protein typA - - ko:K06207 - - - - ko00000 - - - EFG_C,GTP_EFTU,GTP_EFTU_D2 YYD2_k127_4010857_1 485913.Krac_3483 6.084e-142 460.0 COG0520@1|root,COG0520@2|Bacteria,2G62I@200795|Chloroflexi 200795|Chloroflexi E PFAM aminotransferase class V - - 5.1.1.17 ko:K04127 ko00311,ko01100,ko01130,map00311,map01100,map01130 M00673 R04147 RC00302 ko00000,ko00001,ko00002,ko01000 - - - Aminotran_5 YYD2_k127_4010857_6 926569.ANT_18530 3.143e-58 205.0 COG0691@1|root,COG0691@2|Bacteria,2G6NE@200795|Chloroflexi 200795|Chloroflexi J Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene smpB - - ko:K03664 - - - - ko00000 - - - SmpB YYD2_k127_4010857_7 1499967.BAYZ01000179_gene4623 5.448e-55 202.0 29FVD@1|root,302T2@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - YYD2_k127_4010857_4 926550.CLDAP_26430 1.254e-74 265.0 COG0388@1|root,COG0388@2|Bacteria,2G6KM@200795|Chloroflexi 200795|Chloroflexi S PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - 3.5.1.53 ko:K11206,ko:K12251 ko00330,ko01100,map00330,map01100 - R01152 RC00096 ko00000,ko00001,ko01000 - - - CN_hydrolase YYD2_k127_4010857_2 324602.Caur_3345 2.688e-118 387.0 COG2084@1|root,COG2084@2|Bacteria,2G6B3@200795|Chloroflexi,376B1@32061|Chloroflexia 32061|Chloroflexia I PFAM NADP oxidoreductase coenzyme F420-dependent - - 1.1.1.31 ko:K00020 ko00280,ko01100,map00280,map01100 - R05066 RC00099 ko00000,ko00001,ko01000 - - - NAD_binding_11,NAD_binding_2 YYD2_k127_4010857_5 926569.ANT_18550 1.212e-64 232.0 COG1752@1|root,COG1752@2|Bacteria,2G70S@200795|Chloroflexi 200795|Chloroflexi S PFAM Patatin - - - ko:K07001 - - - - ko00000 - - - Patatin YYD2_k127_4024066_1 383372.Rcas_2874 2.939e-56 216.0 COG3210@1|root,COG3210@2|Bacteria,2G8VW@200795|Chloroflexi,377DU@32061|Chloroflexia 2|Bacteria M TIGRFAM polymorphic outer membrane protein - - - ko:K21449 - - - - ko00000,ko02000 1.B.40.2 - - Beta_helix,Peptidase_S74 YYD2_k127_4024066_2 215803.DB30_3800 2.276e-09 70.0 COG3509@1|root,COG3509@2|Bacteria,1MXUI@1224|Proteobacteria,430Q8@68525|delta/epsilon subdivisions,2WVYQ@28221|Deltaproteobacteria,2YU06@29|Myxococcales 28221|Deltaproteobacteria Q Esterase PHB depolymerase - - - - - - - - - - - - Esterase_phd YYD2_k127_4024066_0 926569.ANT_27830 2.933e-120 397.0 COG1994@1|root,COG1994@2|Bacteria 2|Bacteria S metallopeptidase activity - - - - - - - - - - - - Peptidase_M50 YYD2_k127_4040134_1 926569.ANT_30330 2.003e-184 602.0 COG0457@1|root,COG0457@2|Bacteria,2G73P@200795|Chloroflexi 200795|Chloroflexi S PFAM TPR repeat-containing protein - - - - - - - - - - - - TPR_16,TPR_19,TPR_2,TPR_4,TPR_6,TPR_7,TPR_8 YYD2_k127_4040134_0 713586.KB900536_gene2217 3.516e-221 717.0 COG0258@1|root,COG0749@1|root,COG0258@2|Bacteria,COG0749@2|Bacteria,1MU31@1224|Proteobacteria,1RNBG@1236|Gammaproteobacteria,1WWSC@135613|Chromatiales 135613|Chromatiales L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity polA - 2.7.7.7 ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 - R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko01000,ko03032,ko03400 - - - 5_3_exonuc,5_3_exonuc_N,DNA_pol_A,DNA_pol_A_exo1 YYD2_k127_4040134_6 926569.ANT_30350 1.385e-68 254.0 COG0745@1|root,COG0745@2|Bacteria 926569.ANT_30350|- T phosphorelay signal transduction system - - - - - - - - - - - - - YYD2_k127_4040134_2 926569.ANT_04320 2.534e-118 386.0 COG0491@1|root,COG0491@2|Bacteria,2G8XN@200795|Chloroflexi 200795|Chloroflexi S Metallo-beta-lactamase superfamily - - - - - - - - - - - - Lactamase_B YYD2_k127_4040134_7 926569.ANT_06220 1.397e-46 185.0 COG0629@1|root,COG0629@2|Bacteria,2G6YE@200795|Chloroflexi 200795|Chloroflexi L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism - - - ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 - - - ko00000,ko00001,ko03029,ko03032,ko03400 - - - SSB YYD2_k127_4040134_9 880073.Calab_2775 1.879e-13 75.0 COG4191@1|root,COG4191@2|Bacteria 2|Bacteria T Histidine kinase - - 2.7.11.1,4.6.1.1 ko:K01768,ko:K12132 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000,ko01001 - - - DUF3467 YYD2_k127_4040134_5 926569.ANT_06230 4.35e-70 252.0 COG2178@1|root,COG2178@2|Bacteria,2G6RW@200795|Chloroflexi 200795|Chloroflexi J PFAM Translin - - - ko:K07477 - - - - ko00000 - - - - YYD2_k127_4040134_8 1121920.AUAU01000013_gene1720 8.508e-28 125.0 COG3613@1|root,COG3613@2|Bacteria 2|Bacteria F nucleoside 2-deoxyribosyltransferase - GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009123,GO:0009125,GO:0009159,GO:0009162,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0070694,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 - - - - - - - - - - Nuc_deoxyrib_tr YYD2_k127_4040134_3 926569.ANT_28000 7.486e-99 339.0 COG2203@1|root,COG2204@1|root,COG5002@1|root,COG2203@2|Bacteria,COG2204@2|Bacteria,COG5002@2|Bacteria,2GBJN@200795|Chloroflexi 200795|Chloroflexi T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - GAF_2,HATPase_c,HisKA,PAS,Response_reg YYD2_k127_4040134_4 926569.ANT_27990 7.486e-76 267.0 COG0642@1|root,COG0745@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria 926569.ANT_27990|- T PhoQ Sensor - - - - - - - - - - - - - YYD2_k127_404559_0 926569.ANT_08730 0.0 1090.0 COG0751@1|root,COG0752@1|root,COG0751@2|Bacteria,COG0752@2|Bacteria,2G7V0@200795|Chloroflexi 200795|Chloroflexi J Glycyl-tRNA synthetase alpha subunit glyQS - 6.1.1.14 ko:K14164 ko00970,map00970 M00360 R03654 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko03016 - - - tRNA-synt_2e,tRNA_synt_2f YYD2_k127_404559_5 863365.XHC_4139 1.188e-22 111.0 COG1668@1|root,COG1668@2|Bacteria,1R3RG@1224|Proteobacteria,1RQT1@1236|Gammaproteobacteria,1X3GM@135614|Xanthomonadales 135614|Xanthomonadales CP permease natB - - ko:K09696 ko02010,ko02020,map02010,map02020 M00253 - - ko00000,ko00001,ko00002,ko02000 3.A.1.115 - - ABC2_membrane_2,ABC2_membrane_3 YYD2_k127_404559_3 215803.DB30_1336 1.189e-72 253.0 COG4555@1|root,COG4555@2|Bacteria,1QU2T@1224|Proteobacteria,43BX9@68525|delta/epsilon subdivisions,2X782@28221|Deltaproteobacteria,2YUK4@29|Myxococcales 28221|Deltaproteobacteria CP ABC transporter natA - 3.6.3.7 ko:K09697 ko02010,ko02020,map02010,map02020 M00253 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.115 - - ABC_tran YYD2_k127_404559_2 869210.Marky_0500 1.296e-109 376.0 COG2133@1|root,COG2133@2|Bacteria,1WJQY@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus G PFAM Glucose Sorbosone dehydrogenase - - - - - - - - - - - - GSDH YYD2_k127_404559_6 83406.HDN1F_24420 1.689e-18 100.0 COG0644@1|root,COG0644@2|Bacteria,1MXQY@1224|Proteobacteria,1SEJ8@1236|Gammaproteobacteria 1236|Gammaproteobacteria C geranylgeranyl reductase - - - - - - - - - - - - FAD_binding_3,FAD_oxidored,Lycopene_cycl YYD2_k127_404559_1 268407.PWYN_22775 8.336e-127 413.0 COG0604@1|root,COG0604@2|Bacteria,1TQ0M@1239|Firmicutes,4HA8M@91061|Bacilli,26TF8@186822|Paenibacillaceae 91061|Bacilli C NADPH quinone reductase - - - - - - - - - - - - ADH_N,ADH_zinc_N_2 YYD2_k127_404559_4 180332.JTGN01000001_gene5156 9.341e-72 251.0 COG3153@1|root,COG3153@2|Bacteria,1V3PW@1239|Firmicutes,24ACS@186801|Clostridia 186801|Clostridia K Acetyltransferase, gnat family - - - - - - - - - - - - Acetyltransf_1,Acetyltransf_7,Acetyltransf_9 YYD2_k127_4049389_2 1294142.CINTURNW_0881 3.254e-43 166.0 COG0500@1|root,COG2226@2|Bacteria,1V5IF@1239|Firmicutes,25BHB@186801|Clostridia,36WMM@31979|Clostridiaceae 186801|Clostridia Q Hypothetical methyltransferase - - - - - - - - - - - - Methyltransf_11 YYD2_k127_4049389_1 235909.GK3395 2.586e-102 346.0 COG1250@1|root,COG1250@2|Bacteria,1TPJS@1239|Firmicutes,4HA59@91061|Bacilli,1WFG8@129337|Geobacillus 91061|Bacilli I 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain mmgB - 1.1.1.157 ko:K00074 ko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120 - R01976,R05576,R06941 RC00029,RC00117 ko00000,ko00001,ko01000 - - - 3HCDH,3HCDH_N YYD2_k127_4049389_0 316274.Haur_0522 5.152e-120 394.0 COG0183@1|root,COG0183@2|Bacteria,2G66E@200795|Chloroflexi,3753E@32061|Chloroflexia 32061|Chloroflexia I Belongs to the thiolase family - - 2.3.1.9 ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 M00088,M00095,M00373,M00374,M00375 R00238,R01177 RC00004,RC00326 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Thiolase_C,Thiolase_N YYD2_k127_4073679_4 926550.CLDAP_15350 2.05e-45 174.0 COG0744@1|root,COG0744@2|Bacteria,2G5ZG@200795|Chloroflexi 200795|Chloroflexi M PFAM glycosyl transferase, family 51 - - - - - - - - - - - - BiPBP_C,Transgly,Transpeptidase YYD2_k127_4073679_2 321332.CYB_0528 9.061e-86 301.0 COG2211@1|root,COG2211@2|Bacteria,1G0ZY@1117|Cyanobacteria,1GYSX@1129|Synechococcus 1117|Cyanobacteria P GPH family sugar transporter melB - - ko:K03292 - - - - ko00000 2.A.2 - - MFS_2 YYD2_k127_4073679_0 926569.ANT_30560 4.779e-217 683.0 COG0215@1|root,COG0215@2|Bacteria,2G5Z0@200795|Chloroflexi 200795|Chloroflexi J Belongs to the class-I aminoacyl-tRNA synthetase family cysS - 6.1.1.16 ko:K01883 ko00970,map00970 M00359,M00360 R03650 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - DALR_2,tRNA-synt_1e,tRNA-synt_1g YYD2_k127_4073679_1 926569.ANT_30570 1.205e-133 435.0 COG4956@1|root,COG4956@2|Bacteria,2G5YK@200795|Chloroflexi 200795|Chloroflexi S SMART Nucleotide binding protein, PINc - - - - - - - - - - - - TRAM YYD2_k127_4073679_3 926569.ANT_25450 5.089e-68 233.0 COG2896@1|root,COG2896@2|Bacteria,2G5JT@200795|Chloroflexi 200795|Chloroflexi H Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate moaA - 4.1.99.22 ko:K03639 ko00790,ko01100,ko04122,map00790,map01100,map04122 - R09394 RC03420 ko00000,ko00001,ko01000 - - - Fer4_12,Mob_synth_C,Radical_SAM YYD2_k127_4079173_10 926569.ANT_00170 9.195e-20 90.0 COG0177@1|root,COG0177@2|Bacteria,2G6QA@200795|Chloroflexi 200795|Chloroflexi L FES - - 4.2.99.18 ko:K10773 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - HhH-GPD YYD2_k127_4079173_5 926569.ANT_03120 8.481e-85 293.0 COG4448@1|root,COG4448@2|Bacteria 2|Bacteria E L-asparaginase II ansA - 3.5.1.1 ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 - R00485 RC00010,RC02798 ko00000,ko00001,ko01000 - - - Asparaginase_II YYD2_k127_4079173_3 926569.ANT_03110 5.623e-95 319.0 COG0491@1|root,COG0491@2|Bacteria 2|Bacteria GM Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - - - - - - - - - - Lactamase_B YYD2_k127_4079173_2 926569.ANT_06880 3.95e-123 421.0 COG0642@1|root,COG2203@1|root,COG2203@2|Bacteria,COG2205@2|Bacteria 2|Bacteria T PhoQ Sensor devS GO:0000166,GO:0000287,GO:0001666,GO:0003032,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005488,GO:0005509,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0009593,GO:0009628,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0017076,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0019825,GO:0019826,GO:0020037,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0036211,GO:0036293,GO:0040007,GO:0042165,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0046872,GO:0046906,GO:0048037,GO:0050896,GO:0051606,GO:0051775,GO:0051776,GO:0070025,GO:0070026,GO:0070482,GO:0070483,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.13.3 ko:K07682 ko02020,map02020 M00482 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - GAF,GAF_2,GAF_3,HATPase_c,HATPase_c_2,HisKA_3 YYD2_k127_4079173_7 926569.ANT_19610 2.853e-63 224.0 COG0546@1|root,COG0546@2|Bacteria 2|Bacteria S glycolate biosynthetic process - - 3.1.3.18 ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 - R01334 RC00017 ko00000,ko00001,ko01000 - - - HAD_2 YYD2_k127_4079173_11 1242864.D187_003440 4.21e-10 66.0 2C5K3@1|root,344B2@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - YYD2_k127_4079173_4 491916.RHECIAT_CH0000394 9.729e-86 291.0 COG1024@1|root,COG1024@2|Bacteria,1MWZC@1224|Proteobacteria,2TRYS@28211|Alphaproteobacteria,4BAKZ@82115|Rhizobiaceae 28211|Alphaproteobacteria I Belongs to the enoyl-CoA hydratase isomerase family MA20_15895 - 4.2.1.17 ko:K01692 ko00071,ko00280,ko00281,ko00310,ko00360,ko00362,ko00380,ko00410,ko00627,ko00640,ko00650,ko00903,ko00930,ko01100,ko01110,ko01120,ko01130,ko01212,map00071,map00280,map00281,map00310,map00360,map00362,map00380,map00410,map00627,map00640,map00650,map00903,map00930,map01100,map01110,map01120,map01130,map01212 M00032,M00087 R03026,R03045,R04137,R04170,R04204,R04224,R04738,R04740,R04744,R04746,R04749,R05595,R06411,R06412,R06942,R08093 RC00831,RC00834,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115 ko00000,ko00001,ko00002,ko01000 - - - ECH_1 YYD2_k127_4079173_6 926569.ANT_29760 1.27e-65 233.0 COG2746@1|root,COG2746@2|Bacteria 2|Bacteria V aminoglycoside 3-N-acetyltransferase activity yokD - 2.3.1.81 ko:K00662 - - - - ko00000,ko01000,ko01504 - - - Antibiotic_NAT YYD2_k127_4079173_8 313589.JNB_17843 2.192e-41 157.0 2EMAT@1|root,33EZU@2|Bacteria,2HMP6@201174|Actinobacteria,4FHFN@85021|Intrasporangiaceae 201174|Actinobacteria - - - - - - - - - - - - - - - YYD2_k127_4079173_0 926569.ANT_01830 0.0 1517.0 COG0587@1|root,COG0587@2|Bacteria,2G5IY@200795|Chloroflexi 200795|Chloroflexi L TIGRFAM DNA polymerase III, alpha subunit dnaE - 2.7.7.7 ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_alpha,HHH_6,PHP,tRNA_anti-codon YYD2_k127_4079173_9 545694.TREPR_0358 4.007e-25 117.0 2E53X@1|root,32ZWX@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - YYD2_k127_4079173_1 509191.AEDB02000067_gene925 3.921e-133 435.0 COG1696@1|root,COG1696@2|Bacteria,1TP52@1239|Firmicutes,248V4@186801|Clostridia,3WN8Y@541000|Ruminococcaceae 186801|Clostridia M MBOAT family - - - - - - - - - - - - MBOAT YYD2_k127_4085111_3 761193.Runsl_1910 6.757e-11 65.0 COG0823@1|root,COG1228@1|root,COG0823@2|Bacteria,COG1228@2|Bacteria,4PM8I@976|Bacteroidetes,47N7Y@768503|Cytophagia 976|Bacteroidetes QU Amidohydrolase family - - - - - - - - - - - - Amidohydro_1,PD40 YYD2_k127_4085111_1 926569.ANT_06170 2.987e-144 463.0 COG0463@1|root,COG0463@2|Bacteria,2G5X5@200795|Chloroflexi 200795|Chloroflexi M PFAM Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 YYD2_k127_4085111_0 926550.CLDAP_05850 5.515e-158 503.0 COG1089@1|root,COG1089@2|Bacteria,2G5P2@200795|Chloroflexi 200795|Chloroflexi M Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose gmd - 4.2.1.47 ko:K01711 ko00051,ko00520,ko01100,map00051,map00520,map01100 - R00888 RC00402 ko00000,ko00001,ko01000 - - - GDP_Man_Dehyd YYD2_k127_4095431_1 1173263.Syn7502_03178 9.097e-12 72.0 28KW4@1|root,2ZACH@2|Bacteria,1G2SE@1117|Cyanobacteria 1117|Cyanobacteria - - - - - - - - - - - - - - - YYD2_k127_4095431_0 926569.ANT_29850 1.168e-51 200.0 2CVPW@1|root,32SXZ@2|Bacteria,2G7DV@200795|Chloroflexi 200795|Chloroflexi - - - - - - - - - - - - - - - YYD2_k127_4127187_0 926569.ANT_03460 5.296e-186 592.0 COG1164@1|root,COG1164@2|Bacteria,2G5JB@200795|Chloroflexi 200795|Chloroflexi E PFAM peptidase M3A and M3B, thimet oligopeptidase F - - - ko:K08602 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M3,Peptidase_M3_N YYD2_k127_4127187_2 926569.ANT_24700 5.086e-155 496.0 COG0012@1|root,COG0012@2|Bacteria,2G5UY@200795|Chloroflexi 200795|Chloroflexi J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner ychF - - ko:K06942 - - - - ko00000,ko03009 - - - MMR_HSR1,YchF-GTPase_C YYD2_k127_4127187_1 926569.ANT_28990 7.814e-176 565.0 COG0448@1|root,COG0448@2|Bacteria,2G66Q@200795|Chloroflexi 200795|Chloroflexi H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans glgC - 2.7.7.27 ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 M00565 R00948 RC00002 ko00000,ko00001,ko00002,ko01000 - - - Hexapep,NTP_transferase YYD2_k127_4127187_3 926569.ANT_31250 4.61e-99 330.0 COG0474@1|root,COG0474@2|Bacteria,2G5ZS@200795|Chloroflexi 200795|Chloroflexi P TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC - - 3.6.3.8 ko:K01537 - - - - ko00000,ko01000 3.A.3.2 - - Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase YYD2_k127_412720_6 635013.TherJR_0820 4.326e-40 154.0 COG1807@1|root,COG1807@2|Bacteria,1TTJ7@1239|Firmicutes,24ZXI@186801|Clostridia 186801|Clostridia M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - ko:K13687 - - - - ko00000,ko01000,ko01003 - GT89 - - YYD2_k127_412720_3 330214.NIDE4175 1.652e-50 191.0 COG1262@1|root,COG1262@2|Bacteria,3J14J@40117|Nitrospirae 2|Bacteria S Evidence 4 Homologs of previously reported genes of - - - - - - - - - - - - FGE-sulfatase YYD2_k127_412720_1 926569.ANT_29410 9.998e-134 436.0 COG2309@1|root,COG2309@2|Bacteria,2G62B@200795|Chloroflexi 200795|Chloroflexi E peptidase M29 aminopeptidase II - - - ko:K19689 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M29 YYD2_k127_412720_0 926569.ANT_30270 9.764e-269 844.0 COG0673@1|root,COG1063@1|root,COG0673@2|Bacteria,COG1063@2|Bacteria,2G75J@200795|Chloroflexi 200795|Chloroflexi C PFAM Alcohol dehydrogenase zinc-binding domain protein - - - - - - - - - - - - ADH_N,ADH_zinc_N YYD2_k127_412720_4 926569.ANT_01640 2.26e-49 183.0 COG0500@1|root,COG2226@2|Bacteria,2G8IN@200795|Chloroflexi 200795|Chloroflexi Q ubiE/COQ5 methyltransferase family - - 2.1.1.163,2.1.1.201 ko:K03183 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116,M00117 R04990,R04993,R06859,R08774,R09736 RC00003,RC01253,RC01662 ko00000,ko00001,ko00002,ko01000 - - - Methyltransf_11 YYD2_k127_412720_5 981383.AEWH01000050_gene66 1.646e-44 166.0 COG1051@1|root,COG1051@2|Bacteria,1V5NQ@1239|Firmicutes,4HH6Z@91061|Bacilli 91061|Bacilli F Belongs to the Nudix hydrolase family rppH3 - - - - - - - - - - - NUDIX YYD2_k127_412720_7 1462527.CCDM010000002_gene857 2.985e-32 132.0 COG1051@1|root,COG1051@2|Bacteria,1V6ZQ@1239|Firmicutes,4HIQM@91061|Bacilli,23M1C@182709|Oceanobacillus 91061|Bacilli F NUDIX domain - - - - - - - - - - - - NUDIX YYD2_k127_412720_2 882086.SacxiDRAFT_4366 3.62e-53 204.0 COG0438@1|root,COG0438@2|Bacteria,2GIZG@201174|Actinobacteria,4DZ4S@85010|Pseudonocardiales 201174|Actinobacteria M PFAM Glycosyl transferases group 1 - - 2.4.1.337 ko:K19002 ko00561,ko01100,map00561,map01100 - R10850 RC00005,RC00059 ko00000,ko00001,ko01000,ko01003 - GT4 - Glyco_transf_4,Glycos_transf_1 YYD2_k127_412720_9 138119.DSY1173 2.495e-19 96.0 COG0398@1|root,COG0398@2|Bacteria,1V7NH@1239|Firmicutes,24HNU@186801|Clostridia 186801|Clostridia S SNARE-like domain protein - - - - - - - - - - - - SNARE_assoc YYD2_k127_412720_8 457421.CBFG_00319 4.838e-31 135.0 COG1502@1|root,COG1502@2|Bacteria,1TPKY@1239|Firmicutes,247UR@186801|Clostridia,267NX@186813|unclassified Clostridiales 186801|Clostridia I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol cls - - ko:K06131 ko00564,ko01100,map00564,map01100 - R07390 RC00017 ko00000,ko00001,ko01000 - - - PLDc_2,PLDc_N YYD2_k127_412720_10 867845.KI911784_gene2447 1.934e-08 63.0 COG0642@1|root,COG2205@2|Bacteria,2G5YI@200795|Chloroflexi,37540@32061|Chloroflexia 32061|Chloroflexia T N-terminal 7TM region of histidine kinase - - - - - - - - - - - - HisKA_7TM YYD2_k127_414003_1 926550.CLDAP_26830 5.186e-70 245.0 COG0210@1|root,COG0210@2|Bacteria,2G7VU@200795|Chloroflexi 200795|Chloroflexi F DNA helicase - - - - - - - - - - - - - YYD2_k127_414003_2 290397.Adeh_1286 1.111e-46 180.0 COG0454@1|root,COG0456@2|Bacteria,1RD40@1224|Proteobacteria,43EF3@68525|delta/epsilon subdivisions,2X0ID@28221|Deltaproteobacteria,2Z1N2@29|Myxococcales 28221|Deltaproteobacteria K Acetyltransferase (GNAT) family - - - - - - - - - - - - Acetyltransf_1 YYD2_k127_414003_0 926569.ANT_19790 5.159e-143 473.0 COG0210@1|root,COG0210@2|Bacteria,2G86J@200795|Chloroflexi 200795|Chloroflexi L UvrD-like helicase C-terminal domain - - 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - UvrD-helicase,UvrD_C YYD2_k127_4156823_12 926569.ANT_15320 1.627e-06 52.0 COG0285@1|root,COG0285@2|Bacteria,2G64M@200795|Chloroflexi 200795|Chloroflexi H PFAM cytoplasmic peptidoglycan synthetase domain protein folC - 6.3.2.12,6.3.2.17 ko:K11754 ko00790,ko01100,map00790,map01100 M00126,M00841 R00942,R02237,R04241 RC00064,RC00090,RC00162 ko00000,ko00001,ko00002,ko01000 - - - Mur_ligase_C,Mur_ligase_M YYD2_k127_4156823_8 479432.Sros_0687 2.072e-30 124.0 COG0537@1|root,COG0537@2|Bacteria 2|Bacteria FG bis(5'-adenosyl)-triphosphatase activity - - - - - - - - - - - - DUF4269 YYD2_k127_4156823_9 926569.ANT_22500 1.721e-26 112.0 COG1550@1|root,COG1550@2|Bacteria,2G765@200795|Chloroflexi 200795|Chloroflexi S Protein of unknown function (DUF503) - - - ko:K09764 - - - - ko00000 - - - DUF503 YYD2_k127_4156823_2 926569.ANT_22510 1.971e-98 327.0 COG1028@1|root,COG1028@2|Bacteria,2G6GQ@200795|Chloroflexi 200795|Chloroflexi IQ Enoyl-(Acyl carrier protein) reductase - - 1.1.1.100,1.1.1.140 ko:K00059,ko:K00068 ko00051,ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00051,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R05607,R07759,R07763,R10116,R10120,R11671 RC00029,RC00085,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short_C2 YYD2_k127_4156823_11 935948.KE386494_gene534 7.305e-08 55.0 COG1149@1|root,COG1149@2|Bacteria,1VUEG@1239|Firmicutes,2503A@186801|Clostridia,42GUQ@68295|Thermoanaerobacterales 186801|Clostridia C 4Fe-4S binding domain - - - - - - - - - - - - Fer4,Fer4_21,Fer4_6 YYD2_k127_4156823_0 926569.ANT_28150 7.23e-133 440.0 COG0728@1|root,COG0728@2|Bacteria,2G5MD@200795|Chloroflexi 200795|Chloroflexi S Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane - - - ko:K03980 - - - - ko00000,ko01011,ko02000 2.A.66.4 - - MVIN YYD2_k127_4156823_4 926569.ANT_03890 1.306e-64 233.0 COG0457@1|root,COG0457@2|Bacteria 926569.ANT_03890|- S peptidyl-tyrosine sulfation - - - - - - - - - - - - - YYD2_k127_4156823_7 926569.ANT_03880 3.095e-40 154.0 COG5615@1|root,COG5615@2|Bacteria 2|Bacteria L integral membrane protein - - - - - - - - - - - - CopD YYD2_k127_4156823_1 324602.Caur_1853 4.081e-123 411.0 COG0621@1|root,COG0621@2|Bacteria,2G5ZJ@200795|Chloroflexi,374VG@32061|Chloroflexia 32061|Chloroflexia J Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 rimO - 2.8.4.4 ko:K14441 - - R10652 RC00003,RC03217 ko00000,ko01000,ko03009 - - - Radical_SAM,UPF0004 YYD2_k127_4156823_6 926569.ANT_03850 3.128e-50 194.0 COG1426@1|root,COG1426@2|Bacteria,2G773@200795|Chloroflexi 200795|Chloroflexi T SMART helix-turn-helix domain protein - - - ko:K15539 - - - - ko00000 - - - DUF4115,HTH_25 YYD2_k127_4156823_10 926569.ANT_03850 8.865e-13 76.0 COG1426@1|root,COG1426@2|Bacteria,2G773@200795|Chloroflexi 200795|Chloroflexi T SMART helix-turn-helix domain protein - - - ko:K15539 - - - - ko00000 - - - DUF4115,HTH_25 YYD2_k127_4156823_5 926569.ANT_03840 1.185e-53 194.0 COG0359@1|root,COG0359@2|Bacteria,2G6V2@200795|Chloroflexi 200795|Chloroflexi J Binds to the 23S rRNA rplI GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02939 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L9_C,Ribosomal_L9_N YYD2_k127_4156823_3 926550.CLDAP_31520 2.446e-74 261.0 COG0019@1|root,COG0019@2|Bacteria,2G5RR@200795|Chloroflexi 200795|Chloroflexi E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine lysA - 4.1.1.20 ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R00451 RC00299 ko00000,ko00001,ko00002,ko01000 - - - Orn_Arg_deC_N,Orn_DAP_Arg_deC YYD2_k127_4187922_5 208439.AJAP_16000 3.689e-29 121.0 2ECJT@1|root,336HX@2|Bacteria,2IKEF@201174|Actinobacteria 201174|Actinobacteria - - - - - - - - - - - - - - - YYD2_k127_4187922_3 443143.GM18_2039 9.653e-67 231.0 COG0262@1|root,COG0262@2|Bacteria,1R7YJ@1224|Proteobacteria,42ZF9@68525|delta/epsilon subdivisions,2WUSX@28221|Deltaproteobacteria 28221|Deltaproteobacteria H RibD C-terminal domain - - - - - - - - - - - - RibD_C YYD2_k127_4187922_0 926569.ANT_02850 3.002e-200 632.0 COG1236@1|root,COG1236@2|Bacteria,2G62G@200795|Chloroflexi 200795|Chloroflexi J Beta-Casp domain - - - ko:K07576 - - - - ko00000 - - - Beta-Casp,Lactamase_B,Lactamase_B_6,RMMBL YYD2_k127_4187922_2 926569.ANT_02860 1.377e-95 328.0 COG0349@1|root,COG0349@2|Bacteria,2G74K@200795|Chloroflexi 200795|Chloroflexi L 3'-5' exonuclease - - 3.1.13.5 ko:K03684 - - - - ko00000,ko01000,ko03016 - - - DNA_pol_A_exo1,HRDC YYD2_k127_4187922_4 926569.ANT_29020 2.058e-30 129.0 COG0454@1|root,COG0456@2|Bacteria 2|Bacteria K acetyltransferase - - 2.3.1.128 ko:K03789 - - - - ko00000,ko01000,ko03009 - - - Acetyltransf_1 YYD2_k127_4187922_1 926569.ANT_29010 1.853e-141 455.0 COG0330@1|root,COG0330@2|Bacteria,2G5SB@200795|Chloroflexi 200795|Chloroflexi O PFAM band 7 protein - - - - - - - - - - - - Band_7 YYD2_k127_4187922_6 1266925.JHVX01000004_gene1141 9.58e-08 58.0 COG1030@1|root,COG1030@2|Bacteria,1MUJN@1224|Proteobacteria,2VMUK@28216|Betaproteobacteria,372K1@32003|Nitrosomonadales 28216|Betaproteobacteria O NfeD-like C-terminal, partner-binding nfeD - - ko:K07403 - - - - ko00000 - - - NfeD YYD2_k127_422501_1 926569.ANT_11910 4.032e-78 268.0 COG0639@1|root,COG0639@2|Bacteria,2G6GC@200795|Chloroflexi 200795|Chloroflexi T PFAM metallophosphoesterase - - - - - - - - - - - - Metallophos_2 YYD2_k127_422501_0 926569.ANT_11930 3.243e-156 502.0 COG0452@1|root,COG0452@2|Bacteria,2G60D@200795|Chloroflexi 200795|Chloroflexi H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine coaBC - 4.1.1.36,6.3.2.5 ko:K13038 ko00770,ko01100,map00770,map01100 M00120 R03269,R04231 RC00064,RC00090,RC00822 ko00000,ko00001,ko00002,ko01000 - - - DFP,Flavoprotein YYD2_k127_4232468_9 926569.ANT_19900 2.081e-09 59.0 COG0498@1|root,COG0498@2|Bacteria,2G5RK@200795|Chloroflexi 200795|Chloroflexi E PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit - - 4.2.3.1 ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 M00018 R01466,R05086 RC00017,RC00526 ko00000,ko00001,ko00002,ko01000 - - - PALP YYD2_k127_4232468_5 316274.Haur_1219 6.266e-38 149.0 COG0784@1|root,COG0784@2|Bacteria,2GA6X@200795|Chloroflexi,375DW@32061|Chloroflexia 2|Bacteria T PFAM response regulator receiver - - - ko:K11443 ko02020,ko04112,map02020,map04112 M00511 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg YYD2_k127_4232468_0 316274.Haur_1218 4.072e-214 677.0 COG0498@1|root,COG0784@1|root,COG0498@2|Bacteria,COG0784@2|Bacteria,2G66Y@200795|Chloroflexi,375PP@32061|Chloroflexia 2|Bacteria E Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine thrC - 4.2.3.1 ko:K01733,ko:K22010 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 M00018,M00839 R01466,R05086 RC00017,RC00526 ko00000,ko00001,ko00002,ko01000,ko02022 - - - HATPase_c,HisKA,PALP,Response_reg YYD2_k127_4232468_1 316274.Haur_1217 8.555e-138 467.0 COG0642@1|root,COG2202@1|root,COG3290@1|root,COG3829@1|root,COG3850@1|root,COG5002@1|root,COG2202@2|Bacteria,COG2205@2|Bacteria,COG3290@2|Bacteria,COG3829@2|Bacteria,COG3850@2|Bacteria,COG5002@2|Bacteria 2|Bacteria T protein histidine kinase activity - - 2.7.13.3,4.6.1.1 ko:K01768,ko:K11527,ko:K18143 ko00230,ko01501,ko02025,ko04113,ko04213,map00230,map01501,map02025,map04113,map04213 M00649,M00655,M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022 - - - CHASE,GAF,GGDEF,HAMP,HATPase_c,HisKA,Hpt,PAS,PAS_3,PAS_4,PAS_8,PAS_9,Response_reg YYD2_k127_4232468_6 1128421.JAGA01000001_gene2038 1.542e-24 122.0 COG2203@1|root,COG2208@1|root,COG2203@2|Bacteria,COG2208@2|Bacteria,2NQ3V@2323|unclassified Bacteria 2|Bacteria KT COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit - - 3.1.3.3 ko:K07315 - - - - ko00000,ko01000,ko03021 - - - GAF,GAF_2,GGDEF,SpoIIE YYD2_k127_4232468_4 316274.Haur_1217 3.037e-40 173.0 COG0642@1|root,COG2202@1|root,COG3290@1|root,COG3829@1|root,COG3850@1|root,COG5002@1|root,COG2202@2|Bacteria,COG2205@2|Bacteria,COG3290@2|Bacteria,COG3829@2|Bacteria,COG3850@2|Bacteria,COG5002@2|Bacteria 2|Bacteria T protein histidine kinase activity - - 2.7.13.3,4.6.1.1 ko:K01768,ko:K11527,ko:K18143 ko00230,ko01501,ko02025,ko04113,ko04213,map00230,map01501,map02025,map04113,map04213 M00649,M00655,M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022 - - - CHASE,GAF,GGDEF,HAMP,HATPase_c,HisKA,Hpt,PAS,PAS_3,PAS_4,PAS_8,PAS_9,Response_reg YYD2_k127_4232468_2 395961.Cyan7425_3699 1.021e-103 362.0 COG0642@1|root,COG0745@1|root,COG5000@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG5000@2|Bacteria,1G13T@1117|Cyanobacteria,3KG2A@43988|Cyanothece 1117|Cyanobacteria T histidine kinase A domain protein - - - - - - - - - - - - Cache_3-Cache_2,HAMP,HATPase_c,HisKA,Response_reg,dCache_1 YYD2_k127_4232468_8 1123355.JHYO01000003_gene2888 4.926e-10 73.0 COG0642@1|root,COG5002@1|root,COG0642@2|Bacteria,COG5002@2|Bacteria,1R5EN@1224|Proteobacteria,2TWEB@28211|Alphaproteobacteria 28211|Alphaproteobacteria T Histidine kinase - - - - - - - - - - - - HATPase_c,HisKA,PAS_9,Response_reg YYD2_k127_4232468_3 316274.Haur_1217 7.227e-67 253.0 COG0642@1|root,COG2202@1|root,COG3290@1|root,COG3829@1|root,COG3850@1|root,COG5002@1|root,COG2202@2|Bacteria,COG2205@2|Bacteria,COG3290@2|Bacteria,COG3829@2|Bacteria,COG3850@2|Bacteria,COG5002@2|Bacteria 2|Bacteria T protein histidine kinase activity - - 2.7.13.3,4.6.1.1 ko:K01768,ko:K11527,ko:K18143 ko00230,ko01501,ko02025,ko04113,ko04213,map00230,map01501,map02025,map04113,map04213 M00649,M00655,M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000,ko01001,ko01504,ko02022 - - - CHASE,GAF,GGDEF,HAMP,HATPase_c,HisKA,Hpt,PAS,PAS_3,PAS_4,PAS_8,PAS_9,Response_reg YYD2_k127_4232468_7 526222.Desal_2677 1.34e-11 78.0 COG4191@1|root,COG5002@1|root,COG4191@2|Bacteria,COG5002@2|Bacteria,1RCM9@1224|Proteobacteria,43BKN@68525|delta/epsilon subdivisions,2X6YR@28221|Deltaproteobacteria,2MH8N@213115|Desulfovibrionales 28221|Deltaproteobacteria T response regulator, receiver - - - - - - - - - - - - HATPase_c,HisKA,Hpt,Response_reg,dCache_1 YYD2_k127_4268833_6 1267535.KB906767_gene3524 5.062e-08 56.0 COG1629@1|root,COG1629@2|Bacteria 2|Bacteria P transport - - - - - - - - - - - - CarboxypepD_reg,Plug,TonB_dep_Rec YYD2_k127_4268833_3 926569.ANT_20830 2.218e-89 304.0 COG1893@1|root,COG1893@2|Bacteria,2G718@200795|Chloroflexi 200795|Chloroflexi H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - 1.1.1.169 ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R02472 RC00726 ko00000,ko00001,ko00002,ko01000 - - - ApbA,ApbA_C YYD2_k127_4268833_5 604331.AUHY01000042_gene2025 6.823e-45 172.0 COG0406@1|root,COG0406@2|Bacteria,1WMWI@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus G Phosphoglycerate mutase family - - 5.4.2.11 ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 - - - His_Phos_1 YYD2_k127_4268833_1 926569.ANT_29590 1.041e-110 366.0 COG0463@1|root,COG0463@2|Bacteria,2G5JH@200795|Chloroflexi 200795|Chloroflexi M PFAM Glycosyl transferase family 2 - - - ko:K20534 - - - - ko00000,ko01000,ko01005,ko02000 4.D.2.1.9 GT2 - Glycos_transf_2 YYD2_k127_4268833_0 1120959.ATXF01000011_gene340 8.98e-168 544.0 COG0578@1|root,COG0578@2|Bacteria,2GJKN@201174|Actinobacteria,4FKEP@85023|Microbacteriaceae 201174|Actinobacteria C C-terminal domain of alpha-glycerophosphate oxidase glpD - 1.1.5.3 ko:K00111 ko00564,ko01110,map00564,map01110 - R00848 RC00029 ko00000,ko00001,ko01000 - - - DAO,DAO_C YYD2_k127_4268833_4 926569.ANT_27610 6.936e-57 199.0 COG0554@1|root,COG0554@2|Bacteria,2G5TV@200795|Chloroflexi 200795|Chloroflexi F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate glpK GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 - R00847 RC00002,RC00017 ko00000,ko00001,ko01000,ko04147 - - - FGGY_C,FGGY_N YYD2_k127_4270211_0 926569.ANT_15720 1.501e-150 486.0 COG0535@1|root,COG0535@2|Bacteria,2G5XT@200795|Chloroflexi 200795|Chloroflexi C PFAM Radical SAM domain protein - - - ko:K22227 - - - - ko00000 - - - Fer4_12,Fer4_14,Radical_SAM,SPASM YYD2_k127_4270211_1 1511.CLOST_0432 7.639e-09 64.0 COG2234@1|root,COG2234@2|Bacteria,1UHWN@1239|Firmicutes,25E5J@186801|Clostridia 186801|Clostridia S Peptidase family M28 - - - - - - - - - - - - Peptidase_M28 YYD2_k127_4281078_0 926550.CLDAP_09870 9.008e-194 620.0 COG0366@1|root,COG0366@2|Bacteria 2|Bacteria G hydrolase activity, hydrolyzing O-glycosyl compounds ycjM - 2.4.1.7 ko:K00690 ko00500,map00500 - R00803 RC00028 ko00000,ko00001,ko01000 - GH13 - Alpha-amylase,DUF3459,Malt_amylase_C YYD2_k127_4281078_2 665571.STHERM_c12790 1.351e-146 478.0 COG0438@1|root,COG0438@2|Bacteria,2J6VH@203691|Spirochaetes 203691|Spirochaetes M PFAM Glycosyl transferases group 1 - - - - - - - - - - - - Glycos_transf_1 YYD2_k127_4281078_1 926550.CLDAP_06960 2.178e-152 495.0 COG0438@1|root,COG0438@2|Bacteria 2|Bacteria M transferase activity, transferring glycosyl groups - - 2.4.1.270 ko:K21369 - - - - ko00000,ko01000,ko01003 - GT4 - Glyco_trans_4_4,Glyco_transf_4,Glycos_transf_1 YYD2_k127_4281078_4 926550.CLDAP_06970 6.042e-45 173.0 COG0589@1|root,COG1215@1|root,COG0589@2|Bacteria,COG1215@2|Bacteria 2|Bacteria M transferase activity, transferring glycosyl groups gpgS - 2.4.1.266,2.4.1.268 ko:K09118,ko:K13693,ko:K21349 - - - - ko00000,ko01000,ko01003 - GT81 - Glycos_transf_2,Usp YYD2_k127_4282288_0 926569.ANT_06750 2.352e-153 489.0 COG1207@1|root,COG1207@2|Bacteria,2G7KV@200795|Chloroflexi 200795|Chloroflexi M Hexapeptide repeat of succinyl-transferase - - - - - - - - - - - - Hexapep YYD2_k127_4282288_2 555079.Toce_2079 2.77e-109 364.0 COG5322@1|root,COG5322@2|Bacteria,1TSXZ@1239|Firmicutes,24992@186801|Clostridia,42EPQ@68295|Thermoanaerobacterales 186801|Clostridia S Shikimate quinate 5-dehydrogenase - - - - - - - - - - - - Shikimate_DH YYD2_k127_4282288_1 926569.ANT_06590 5.608e-111 364.0 COG2199@1|root,COG3706@2|Bacteria,2G85T@200795|Chloroflexi 200795|Chloroflexi T Response regulator receiver - - - - - - - - - - - - GGDEF,Response_reg YYD2_k127_4284820_0 926569.ANT_17280 1.455e-90 302.0 COG1028@1|root,COG1028@2|Bacteria,2G8P1@200795|Chloroflexi 200795|Chloroflexi IQ Enoyl-(Acyl carrier protein) reductase - - 1.3.1.104 ko:K10780 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00083 R01404,R04430,R04725,R04956,R04959,R04962,R04967,R04970 RC00052,RC00076,RC00120 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short_C2 YYD2_k127_4299242_1 335543.Sfum_3864 1.169e-21 101.0 COG1149@1|root,COG1149@2|Bacteria 2|Bacteria C 4 iron, 4 sulfur cluster binding ldpA - - - - - - - - - - - Fer4,Fer4_6,LdpA_C YYD2_k127_4318635_0 926569.ANT_17310 1.404e-161 517.0 COG0183@1|root,COG0183@2|Bacteria,2G63J@200795|Chloroflexi 200795|Chloroflexi I Belongs to the thiolase family - - 2.3.1.9 ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 M00088,M00095,M00373,M00374,M00375 R00238,R01177 RC00004,RC00326 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Thiolase_C,Thiolase_N YYD2_k127_4318635_3 926569.ANT_30860 1.2e-41 162.0 COG0204@1|root,COG0204@2|Bacteria,2G78P@200795|Chloroflexi 200795|Chloroflexi I PFAM phospholipid glycerol acyltransferase - - 2.3.1.51 ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R02241,R09381 RC00004,RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Acyltransferase YYD2_k127_4318635_2 926569.ANT_30860 2.274e-47 178.0 COG0204@1|root,COG0204@2|Bacteria,2G78P@200795|Chloroflexi 200795|Chloroflexi I PFAM phospholipid glycerol acyltransferase - - 2.3.1.51 ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R02241,R09381 RC00004,RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Acyltransferase YYD2_k127_4318635_1 926569.ANT_00270 4.107e-155 494.0 COG0044@1|root,COG0044@2|Bacteria,2G5N4@200795|Chloroflexi 200795|Chloroflexi F Amidohydrolase family - - 3.5.2.2,3.5.2.5 ko:K01464,ko:K01466 ko00230,ko00240,ko00410,ko00770,ko00983,ko01100,ko01120,map00230,map00240,map00410,map00770,map00983,map01100,map01120 M00046,M00546 R02269,R02425,R03055,R08227 RC00632,RC00680 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Amidohydro_1 YYD2_k127_4318771_0 926569.ANT_19820 9.388e-87 299.0 COG0457@1|root,COG0457@2|Bacteria,2G8PU@200795|Chloroflexi 200795|Chloroflexi S Peptidase_C39 like family - - - - - - - - - - - - Peptidase_C39_2 YYD2_k127_4318771_1 457396.CSBG_03362 3.644e-27 117.0 COG1388@1|root,COG3757@1|root,COG1388@2|Bacteria,COG3757@2|Bacteria,1V484@1239|Firmicutes,24A8T@186801|Clostridia,36FZK@31979|Clostridiaceae 186801|Clostridia M family 25 lyc2 GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.2.1.17 ko:K01185,ko:K07273 - - - - ko00000,ko01000 - - - CW_binding_1,Glyco_hydro_25,LysM,PG_binding_1,SH3_3 YYD2_k127_4333417_9 383372.Rcas_2277 7.034e-06 51.0 COG1716@1|root,COG1716@2|Bacteria,2G9KV@200795|Chloroflexi,376M0@32061|Chloroflexia 32061|Chloroflexia T PFAM Forkhead-associated protein - - - - - - - - - - - - FHA,Peptidase_C11 YYD2_k127_4333417_3 926569.ANT_26460 2e-71 251.0 COG0566@1|root,COG0566@2|Bacteria,2G6MC@200795|Chloroflexi 200795|Chloroflexi J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family - - - ko:K03437 - - - - ko00000,ko03016 - - - SpoU_methylase,SpoU_sub_bind YYD2_k127_4333417_5 648996.Theam_0365 2.98e-44 170.0 COG2110@1|root,COG2110@2|Bacteria,2G45I@200783|Aquificae 200783|Aquificae S Appr-1-p processing domain protein - - - - - - - - - - - - Macro YYD2_k127_4333417_4 926569.ANT_00590 2.136e-45 166.0 COG0292@1|root,COG0292@2|Bacteria,2G6V4@200795|Chloroflexi 200795|Chloroflexi J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit rplT GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - ko:K02887 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L20 YYD2_k127_4333417_6 926569.ANT_00600 5.867e-26 109.0 COG0291@1|root,COG0291@2|Bacteria 2|Bacteria J Belongs to the bacterial ribosomal protein bL35 family rpmI GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02916 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L35p YYD2_k127_4333417_2 926569.ANT_02480 5.522e-80 270.0 COG0290@1|root,COG0290@2|Bacteria,2G6N2@200795|Chloroflexi 200795|Chloroflexi J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins infC - - ko:K02520 - - - - ko00000,ko03012,ko03029 - - - IF3_C,IF3_N YYD2_k127_4333417_1 357808.RoseRS_1829 1.561e-155 501.0 COG0205@1|root,COG0205@2|Bacteria,2G6CJ@200795|Chloroflexi,374WW@32061|Chloroflexia 32061|Chloroflexia F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis pfkA - 2.7.1.11,2.7.1.90 ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130 - R00756,R00764,R02073,R03236,R04779 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PFK YYD2_k127_4333417_7 118173.KB235914_gene4056 4.795e-24 119.0 COG2319@1|root,COG2319@2|Bacteria,1FZVW@1117|Cyanobacteria,1H7R4@1150|Oscillatoriales 1117|Cyanobacteria K Wd40 repeat-containing protein - - - - - - - - - - - - NB-ARC,Pentapeptide,WD40 YYD2_k127_4333417_8 1461577.CCMH01000028_gene2308 1.828e-17 87.0 2E2BG@1|root,32XGP@2|Bacteria,4NTW3@976|Bacteroidetes,1I8ZJ@117743|Flavobacteriia 976|Bacteroidetes S Transcriptional regulator PadR-like family - - - - - - - - - - - - PadR YYD2_k127_4333417_0 926550.CLDAP_20840 2.93e-292 908.0 COG0441@1|root,COG0441@2|Bacteria,2G5PZ@200795|Chloroflexi 200795|Chloroflexi J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) thrS - 6.1.1.3 ko:K01868 ko00970,map00970 M00359,M00360 R03663 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - HGTP_anticodon,tRNA-synt_2b,tRNA_SAD YYD2_k127_4386121_1 665952.HMPREF1015_00479 2.978e-69 247.0 COG2025@1|root,COG2025@2|Bacteria,1TPC8@1239|Firmicutes,4HAE2@91061|Bacilli,1ZBCR@1386|Bacillus 91061|Bacilli C Electron transfer flavoprotein etfA GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 - ko:K03522 - - - - ko00000,ko04147 - - - ETF,ETF_alpha YYD2_k127_4386121_2 1009370.ALO_21324 5.882e-52 193.0 COG2086@1|root,COG2086@2|Bacteria,1TQA0@1239|Firmicutes,4H2QE@909932|Negativicutes 909932|Negativicutes C Electron transfer flavoprotein etfB - - ko:K03521 - - - - ko00000 - - - ETF YYD2_k127_4386121_0 926550.CLDAP_05970 4.652e-86 291.0 COG1960@1|root,COG1960@2|Bacteria,2G65J@200795|Chloroflexi 200795|Chloroflexi C PFAM acyl-CoA dehydrogenase domain protein - - - - - - - - - - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N YYD2_k127_4390902_5 1121861.KB899922_gene3178 0.0001409 52.0 COG3258@1|root,COG3258@2|Bacteria,1QTYW@1224|Proteobacteria,2TWPT@28211|Alphaproteobacteria,2JZ2K@204441|Rhodospirillales 204441|Rhodospirillales C Cytochrome C oxidase, cbb3-type, subunit III - - - - - - - - - - - - Cytochrome_CBB3 YYD2_k127_4390902_4 926550.CLDAP_10820 1.364e-12 78.0 COG3187@1|root,COG3187@2|Bacteria 2|Bacteria O response to heat - - - ko:K03668 - - - - ko00000 - - - Lipoprotein_21,META,YscW YYD2_k127_4390902_3 1382306.JNIM01000001_gene3604 1.753e-54 205.0 COG4409@1|root,COG4409@2|Bacteria 2|Bacteria G exo-alpha-(2->6)-sialidase activity nanA GO:0001573,GO:0003674,GO:0003824,GO:0004308,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006664,GO:0006665,GO:0006672,GO:0006687,GO:0006689,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009311,GO:0009313,GO:0009987,GO:0016020,GO:0016042,GO:0016052,GO:0016787,GO:0016798,GO:0016997,GO:0019377,GO:0030149,GO:0034641,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044424,GO:0044464,GO:0046466,GO:0046479,GO:0046514,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1903509 3.2.1.18 ko:K01186 ko00511,ko00600,ko04142,map00511,map00600,map04142 - R04018 RC00028,RC00077 ko00000,ko00001,ko01000,ko02042 - GH33 - BNR_2,Gram_pos_anchor,Sialidase,YSIRK_signal YYD2_k127_4390902_0 926569.ANT_04950 1.975e-186 590.0 COG0183@1|root,COG0183@2|Bacteria,2G5YW@200795|Chloroflexi 200795|Chloroflexi I Belongs to the thiolase family - - - - - - - - - - - - Thiolase_C,Thiolase_N YYD2_k127_4390902_1 684949.ATTJ01000001_gene2463 1.104e-118 404.0 2EZGX@1|root,2ZBAK@2|Bacteria,1WNDT@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus - - - - - - - - - - - - - - - YYD2_k127_4390902_2 926569.ANT_22520 9.463e-115 377.0 COG1032@1|root,COG1032@2|Bacteria,2G5N0@200795|Chloroflexi 200795|Chloroflexi C Elongator protein 3, MiaB family, Radical SAM - - - - - - - - - - - - Radical_SAM YYD2_k127_4425858_1 671143.DAMO_0407 6.104e-115 376.0 COG0531@1|root,COG0531@2|Bacteria,2NNZQ@2323|unclassified Bacteria 2|Bacteria E Amino acid permease ydaO GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - - - - - - - - - - AA_permease_2 YYD2_k127_4425858_9 671143.DAMO_1520 3.147e-69 241.0 COG0569@1|root,COG0569@2|Bacteria,2NPXT@2323|unclassified Bacteria 2|Bacteria P TrkA-N domain ceoB - - ko:K03499,ko:K10716 - - - - ko00000,ko02000 1.A.1.1,1.A.1.13,1.A.1.17,1.A.1.24,1.A.1.25,1.A.1.6,2.A.38.1,2.A.38.4 - - TrkA_C,TrkA_N YYD2_k127_4425858_8 671143.DAMO_1521 6.67e-80 273.0 COG0569@1|root,COG0569@2|Bacteria,2NPN3@2323|unclassified Bacteria 2|Bacteria P TrkA-C domain trkA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - ko:K03499 - - - - ko00000,ko02000 2.A.38.1,2.A.38.4 - - TrkA_C,TrkA_N YYD2_k127_4425858_17 926569.ANT_22940 3.322e-19 87.0 COG0230@1|root,COG0230@2|Bacteria 2|Bacteria J Ribosomal protein L34 rpmH GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02914 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L34 YYD2_k127_4425858_18 247490.KSU1_D0115 7.783e-06 52.0 COG0594@1|root,COG0594@2|Bacteria,2J0QW@203682|Planctomycetes 203682|Planctomycetes J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme rnpA - 3.1.26.5 ko:K03536 - - - - ko00000,ko01000,ko03016 - - - Ribonuclease_P YYD2_k127_4425858_13 926569.ANT_22920 3.737e-41 153.0 COG0759@1|root,COG0759@2|Bacteria,2G76Q@200795|Chloroflexi 200795|Chloroflexi S Could be involved in insertion of integral membrane proteins into the membrane - - - ko:K08998 - - - - ko00000 - - - Haemolytic YYD2_k127_4425858_15 348780.NP_4750A 5.927e-28 128.0 COG1520@1|root,arCOG02556@2157|Archaea,2Y7US@28890|Euryarchaeota,240XF@183963|Halobacteria 183963|Halobacteria S PQQ-like domain - - - - - - - - - - - - PQQ_3 YYD2_k127_4425858_7 926569.ANT_22900 7.893e-81 278.0 COG0706@1|root,COG0706@2|Bacteria,2G6N0@200795|Chloroflexi 200795|Chloroflexi U PFAM 60 kDa inner membrane insertion protein - - - ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044,ko03029 2.A.9 - - 60KD_IMP YYD2_k127_4425858_10 926569.ANT_22890 9.533e-67 236.0 COG1847@1|root,COG1847@2|Bacteria,2G6XH@200795|Chloroflexi 200795|Chloroflexi S PFAM single-stranded nucleic acid binding R3H domain protein - - - ko:K06346 - - - - ko00000 - - - Jag_N,KH_4,R3H YYD2_k127_4425858_5 926569.ANT_13990 4.748e-98 329.0 COG0524@1|root,COG0524@2|Bacteria,2G6PQ@200795|Chloroflexi 200795|Chloroflexi G PFAM PfkB domain protein - - - - - - - - - - - - PfkB YYD2_k127_4425858_2 926569.ANT_13980 6.1e-109 358.0 COG1192@1|root,COG1192@2|Bacteria,2G62U@200795|Chloroflexi 200795|Chloroflexi D PFAM Cobyrinic acid a,c-diamide synthase - - - ko:K03496 - - - - ko00000,ko03036,ko04812 - - - AAA_31 YYD2_k127_4425858_6 926569.ANT_13970 1.048e-89 303.0 COG1475@1|root,COG1475@2|Bacteria,2G6EK@200795|Chloroflexi 200795|Chloroflexi K Belongs to the ParB family parB - - ko:K03497 - - - - ko00000,ko03000,ko03036,ko04812 - - - ParBc YYD2_k127_4425858_0 926569.ANT_13960 7.298e-177 569.0 COG1574@1|root,COG1574@2|Bacteria,2G5YJ@200795|Chloroflexi 200795|Chloroflexi S PFAM Amidohydrolase 3 - - - - - - - - - - - - Amidohydro_3 YYD2_k127_4425858_12 1125863.JAFN01000001_gene577 3.522e-44 175.0 COG0591@1|root,COG0642@1|root,COG0591@2|Bacteria,COG2205@2|Bacteria,1MUY7@1224|Proteobacteria,43CC6@68525|delta/epsilon subdivisions,2X7N2@28221|Deltaproteobacteria 28221|Deltaproteobacteria T Histidine kinase A domain protein - - - - - - - - - - - - GAF_2,HATPase_c,HisKA YYD2_k127_4425858_3 926569.ANT_13900 3.458e-105 355.0 COG0642@1|root,COG2205@2|Bacteria 926569.ANT_13900|- T PhoQ Sensor - - - - - - - - - - - - - YYD2_k127_4425858_4 926569.ANT_13890 2.857e-103 340.0 COG0745@1|root,COG0745@2|Bacteria,2G8EP@200795|Chloroflexi 200795|Chloroflexi K Transcriptional regulatory protein, C terminal - - - ko:K07667 ko02020,ko02024,map02020,map02024 M00454 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C YYD2_k127_4425858_11 926569.ANT_13860 7.136e-46 174.0 COG1396@1|root,COG1396@2|Bacteria 2|Bacteria K sequence-specific DNA binding - - - - - - - - - - - - HTH_3,HTH_31 YYD2_k127_4425858_14 926569.ANT_13850 8.649e-30 125.0 COG0457@1|root,COG0457@2|Bacteria 926569.ANT_13850|- S peptidyl-tyrosine sulfation - - - - - - - - - - - - - YYD2_k127_4425858_16 926569.ANT_13840 4.301e-20 97.0 COG0454@1|root,COG0456@2|Bacteria,2G7CX@200795|Chloroflexi 200795|Chloroflexi K PFAM GCN5-related N-acetyltransferase - - - - - - - - - - - - Acetyltransf_1 YYD2_k127_4435033_7 757424.Hsero_1473 5.109e-22 99.0 COG1910@1|root,COG2005@1|root,COG1910@2|Bacteria,COG2005@2|Bacteria,1MVS4@1224|Proteobacteria,2VH5J@28216|Betaproteobacteria,472F4@75682|Oxalobacteraceae 28216|Betaproteobacteria P PBP superfamily domain fdsR - - - - - - - - - - - HTH_1,PBP_like YYD2_k127_4435033_11 1041522.MCOL_V210745 8.922e-06 53.0 291VV@1|root,2ZPFK@2|Bacteria,2GYIS@201174|Actinobacteria,23DVY@1762|Mycobacteriaceae 201174|Actinobacteria - - - - - - - - - - - - - - - YYD2_k127_4435033_3 28072.Nos7524_5538 1.462e-57 210.0 COG1571@1|root,COG1571@2|Bacteria 2|Bacteria S tRNA wobble cytosine modification - - - - - - - - - - - - - YYD2_k127_4435033_6 891968.Anamo_1739 7.326e-23 100.0 COG3585@1|root,COG3585@2|Bacteria,3TCMG@508458|Synergistetes 508458|Synergistetes H TOBE domain - - - - - - - - - - - - TOBE YYD2_k127_4435033_1 926569.ANT_00200 1.766e-125 413.0 COG2133@1|root,COG2133@2|Bacteria,2G62S@200795|Chloroflexi 200795|Chloroflexi G Glucose / Sorbosone dehydrogenase - - - - - - - - - - - - GSDH YYD2_k127_4435033_4 926569.ANT_28850 9.92e-52 186.0 COG1765@1|root,COG1765@2|Bacteria 2|Bacteria O OsmC-like protein ycaO - - ko:K09136 - - - - ko00000,ko03009 - - - OsmC,YcaO YYD2_k127_4435033_8 765420.OSCT_0628 1.274e-19 95.0 COG3688@1|root,COG3688@2|Bacteria,2G95S@200795|Chloroflexi,375WR@32061|Chloroflexia 32061|Chloroflexia S YacP-like NYN domain - - - ko:K06962 - - - - ko00000 - - - NYN_YacP YYD2_k127_4435033_2 357808.RoseRS_3190 1.566e-73 259.0 COG0123@1|root,COG0123@2|Bacteria,2G5X3@200795|Chloroflexi,374Z1@32061|Chloroflexia 32061|Chloroflexia BQ PFAM histone deacetylase superfamily - - - - - - - - - - - - Hist_deacetyl YYD2_k127_4435033_9 1313421.JHBV01000016_gene5604 1.779e-17 94.0 2DHAX@1|root,32U8Z@2|Bacteria 2|Bacteria S Zinc finger domain - - - - - - - - - - - - DZR YYD2_k127_4435033_0 880073.Calab_0341 2.448e-249 779.0 COG2986@1|root,COG2986@2|Bacteria,2NQHF@2323|unclassified Bacteria 2|Bacteria E Aromatic amino acid lyase hutH - 4.3.1.3 ko:K01745 ko00340,ko01100,map00340,map01100 M00045 R01168 RC00361 ko00000,ko00001,ko00002,ko01000 - - - Lyase_aromatic YYD2_k127_4435033_13 698964.CDPW8_0627 0.0003634 47.0 COG0609@1|root,COG0609@2|Bacteria,2GK8Z@201174|Actinobacteria,22JSE@1653|Corynebacteriaceae 201174|Actinobacteria P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily hmuU - - ko:K02015 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14 - - FecCD YYD2_k127_4446298_0 926550.CLDAP_01130 1.09e-173 559.0 COG1190@1|root,COG1190@2|Bacteria,2G65Z@200795|Chloroflexi 200795|Chloroflexi J Belongs to the class-II aminoacyl-tRNA synthetase family lysS - 6.1.1.6 ko:K04567 ko00970,map00970 M00359,M00360 R03658 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_2,tRNA_anti-codon YYD2_k127_4446298_1 926569.ANT_29880 7.039e-58 205.0 COG0782@1|root,COG0782@2|Bacteria,2G6U9@200795|Chloroflexi 200795|Chloroflexi K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides greA - - ko:K03624 - - - - ko00000,ko03021 - - - GreA_GreB,GreA_GreB_N YYD2_k127_4446298_3 926569.ANT_00330 1.999e-39 158.0 COG2120@1|root,COG2120@2|Bacteria,2G6YU@200795|Chloroflexi 200795|Chloroflexi S PFAM LmbE family protein - - - - - - - - - - - - PIG-L YYD2_k127_4446298_5 926569.ANT_04790 9.614e-21 101.0 COG1388@1|root,COG1388@2|Bacteria 2|Bacteria M LysM domain - - 3.5.1.104 ko:K07273,ko:K22278 - - - - ko00000,ko01000 - - - Glyco_hydro_25,LysM YYD2_k127_4446298_2 926569.ANT_04780 1.914e-44 168.0 COG0494@1|root,COG0494@2|Bacteria,2G7A1@200795|Chloroflexi 200795|Chloroflexi L PFAM NUDIX hydrolase - - 3.6.1.13 ko:K01515 ko00230,map00230 - R01054 RC00002 ko00000,ko00001,ko01000 - - - NUDIX YYD2_k127_4446298_4 926550.CLDAP_07840 5.434e-34 137.0 2DUZD@1|root,33T56@2|Bacteria,2G7Z6@200795|Chloroflexi 200795|Chloroflexi - - - - - - - - - - - - - - - YYD2_k127_4459486_1 1449080.JQMV01000003_gene988 5.689e-15 82.0 COG1307@1|root,COG1307@2|Bacteria,1WIY0@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S PFAM Uncharacterised protein, DegV family COG1307 - - - - - - - - - - - - DegV YYD2_k127_4459486_0 926569.ANT_25010 6.626e-238 741.0 COG1509@1|root,COG1509@2|Bacteria,2G7ZT@200795|Chloroflexi 200795|Chloroflexi H Lysine-2,3-aminomutase - - 5.4.3.2 ko:K01843 ko00310,map00310 - R00461 RC00303 ko00000,ko00001,ko01000 - - - Acetyltransf_1,LAM_C,Radical_SAM YYD2_k127_4512057_0 926560.KE387025_gene3982 1.223e-120 398.0 COG1136@1|root,COG1136@2|Bacteria,1WM2T@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus V COGs COG1136 ABC-type antimicrobial peptide transport system ATPase component - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran YYD2_k127_4512057_1 926560.KE387025_gene3981 2.316e-20 93.0 COG0577@1|root,COG0577@2|Bacteria 2|Bacteria V efflux transmembrane transporter activity devC - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD YYD2_k127_4517676_0 926569.ANT_04010 1.811e-158 501.0 COG1486@1|root,COG1486@2|Bacteria,2G858@200795|Chloroflexi 200795|Chloroflexi G Family 4 glycosyl hydrolase - - 3.2.1.22 ko:K07406 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 - R01101,R01103,R01104,R01194,R01329,R02926,R03634,R04019,R04470,R05549,R05961,R06091 RC00049,RC00059,RC00451 ko00000,ko00001,ko01000 - - - Glyco_hydro_4,Glyco_hydro_4C YYD2_k127_4517676_2 926550.CLDAP_25110 1.211e-46 189.0 COG2807@1|root,COG2807@2|Bacteria,2GBI4@200795|Chloroflexi 200795|Chloroflexi P Nucleoside H+ symporter - - - ko:K05820 - - - - ko00000,ko02000 2.A.1.27 - - MFS_1_like YYD2_k127_4517676_1 525904.Tter_2663 2.7e-144 466.0 COG2059@1|root,COG2059@2|Bacteria,2NPUT@2323|unclassified Bacteria 2|Bacteria P Chromate transporter chrA - - ko:K07240 - - - - ko00000,ko02000 2.A.51.1 - - Chromate_transp YYD2_k127_4536234_0 383372.Rcas_4165 1.421e-12 79.0 28UHB@1|root,2ZGN2@2|Bacteria,2G9K6@200795|Chloroflexi,377RV@32061|Chloroflexia 32061|Chloroflexia - - - - - - - - - - - - - - - YYD2_k127_4547511_1 926569.ANT_05520 3.05e-98 335.0 COG1363@1|root,COG1363@2|Bacteria,2G5WS@200795|Chloroflexi 200795|Chloroflexi G peptidase M42 family protein - - - - - - - - - - - - Peptidase_M42 YYD2_k127_4547511_0 926569.ANT_23160 1.56e-108 376.0 COG0419@1|root,COG0419@2|Bacteria,2G682@200795|Chloroflexi 200795|Chloroflexi L PFAM SMC domain protein sbcC - - ko:K03546 - - - - ko00000,ko03400 - - - AAA_23,Rad50_zn_hook,SbcCD_C YYD2_k127_4547921_2 196162.Noca_1631 1.281e-135 440.0 COG0540@1|root,COG0540@2|Bacteria,2GKNA@201174|Actinobacteria,4DV65@85009|Propionibacteriales 201174|Actinobacteria F Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain pyrB - 2.1.3.2 ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R01397 RC00064,RC02850 ko00000,ko00001,ko00002,ko01000 - - - OTCace,OTCace_N YYD2_k127_4547921_0 926569.ANT_01250 2.356e-164 521.0 COG0078@1|root,COG0078@2|Bacteria,2G7QE@200795|Chloroflexi 200795|Chloroflexi E Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain - - 2.1.3.9 ko:K09065 ko00220,ko01100,ko01230,map00220,map01100,map01230 M00845 R07245 RC00096 ko00000,ko00001,ko00002,ko01000 - - - OTCace,OTCace_N YYD2_k127_4547921_1 926569.ANT_01260 2.856e-145 467.0 COG0549@1|root,COG0549@2|Bacteria,2G6C7@200795|Chloroflexi 200795|Chloroflexi E Amino acid kinase family - - 2.7.2.2 ko:K00926 ko00220,ko00230,ko00910,ko01100,ko01120,ko01200,map00220,map00230,map00910,map01100,map01120,map01200 - R00150,R01395 RC00002,RC00043,RC02803,RC02804 ko00000,ko00001,ko01000 - - - AA_kinase YYD2_k127_4577247_2 926569.ANT_26550 3.883e-70 245.0 COG3212@1|root,COG3212@2|Bacteria 2|Bacteria T peptidase - - - - - - - - - - - - PepSY YYD2_k127_4577247_0 926569.ANT_29800 4.213e-213 671.0 COG0621@1|root,COG0621@2|Bacteria,2G5QK@200795|Chloroflexi 200795|Chloroflexi J Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine miaB - 2.8.4.3 ko:K06168 - - R10645,R10646,R10647 RC00003,RC00980,RC03221,RC03222 ko00000,ko01000,ko03016 - - - Radical_SAM,TRAM,UPF0004 YYD2_k127_4577247_4 1385514.N782_06400 9.342e-35 137.0 COG0494@1|root,COG0494@2|Bacteria,1VPHI@1239|Firmicutes,4HR9R@91061|Bacilli 91061|Bacilli L nUDIX hydrolase - - - - - - - - - - - - NUDIX YYD2_k127_4577247_1 926569.ANT_30130 7.649e-96 324.0 COG1376@1|root,COG1376@2|Bacteria 2|Bacteria D ErfK ybiS ycfS ynhG family protein - - - - - - - - - - - - DUF5011,YkuD YYD2_k127_4577247_3 926569.ANT_30120 3.439e-55 195.0 COG1376@1|root,COG1376@2|Bacteria,2G6ZY@200795|Chloroflexi 200795|Chloroflexi M PFAM ErfK YbiS YcfS YnhG family protein - - - - - - - - - - - - YkuD YYD2_k127_4578065_3 926550.CLDAP_15630 2.294e-17 89.0 COG0442@1|root,COG0442@2|Bacteria,2G5Q6@200795|Chloroflexi 200795|Chloroflexi J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS proS - 6.1.1.15 ko:K01881 ko00970,map00970 M00359,M00360 R03661 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - HGTP_anticodon,tRNA-synt_2b,tRNA_edit YYD2_k127_4578065_2 926569.ANT_08490 1.321e-45 170.0 COG1664@1|root,COG1664@2|Bacteria,2G7DZ@200795|Chloroflexi 200795|Chloroflexi M Polymer-forming cytoskeletal - - - - - - - - - - - - Bactofilin YYD2_k127_4578065_1 1131462.DCF50_p1622 7.155e-185 604.0 COG3383@1|root,COG3383@2|Bacteria,1UI1F@1239|Firmicutes,25EAG@186801|Clostridia,260KC@186807|Peptococcaceae 186801|Clostridia C TIGRFAM formate dehydrogenase, alpha subunit nuoG - 1.17.1.10,1.6.5.3 ko:K00336,ko:K05299 ko00190,ko00680,ko00720,ko01100,ko01120,ko01200,map00190,map00680,map00720,map01100,map01120,map01200 M00144,M00377 R00134,R11945 RC00061,RC02796 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Fer2_4,Fer4,Fer4_6,Fer4_7,Molybdop_Fe4S4,Molybdopterin,Molydop_binding,NADH-G_4Fe-4S_3 YYD2_k127_4578065_0 926569.ANT_17820 3.74e-222 699.0 COG1894@1|root,COG1894@2|Bacteria,2G5K9@200795|Chloroflexi 200795|Chloroflexi C PFAM Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit - - 1.6.5.3 ko:K00335,ko:K05587 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - 2Fe-2S_thioredx,Complex1_51K,Fer4,NADH_4Fe-4S,SLBB YYD2_k127_4595184_7 926550.CLDAP_30030 1.729e-39 150.0 COG0030@1|root,COG0030@2|Bacteria 2|Bacteria J rRNA (adenine-N6,N6-)-dimethyltransferase activity ksgA - 2.1.1.182,2.1.1.184 ko:K00561,ko:K02528 - - R10716 RC00003,RC03257 br01600,ko00000,ko01000,ko01504,ko03009 - - - RrnaAD YYD2_k127_4595184_1 316067.Geob_3303 6.642e-141 464.0 COG0513@1|root,COG0513@2|Bacteria,1MU49@1224|Proteobacteria,42MGZ@68525|delta/epsilon subdivisions,2WIY6@28221|Deltaproteobacteria,43UHV@69541|Desulfuromonadales 28221|Deltaproteobacteria JKL helicase superfamily c-terminal domain rhlE-2 - 3.6.4.13 ko:K11927 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - DEAD,Helicase_C YYD2_k127_4595184_3 926569.ANT_29200 3.574e-94 333.0 COG4412@1|root,COG4412@2|Bacteria,2G622@200795|Chloroflexi 200795|Chloroflexi S Immune inhibitor A peptidase M6 - - - - - - - - - - - - Peptidase_M6 YYD2_k127_4595184_10 1384057.CD33_12725 1.897e-26 111.0 COG1278@1|root,COG1278@2|Bacteria,1VEE0@1239|Firmicutes,4HNJC@91061|Bacilli,3IYM2@400634|Lysinibacillus 91061|Bacilli K Cold-shock protein cspD - - ko:K03704 - - - - ko00000,ko03000 - - - CSD YYD2_k127_4595184_0 926569.ANT_08530 3.247e-143 459.0 COG1087@1|root,COG1087@2|Bacteria,2G8A8@200795|Chloroflexi 200795|Chloroflexi M NAD(P)H-binding - - 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 - - - Epimerase YYD2_k127_4595184_4 926569.ANT_08510 2.373e-67 234.0 COG2094@1|root,COG2094@2|Bacteria,2G77D@200795|Chloroflexi 200795|Chloroflexi L Belongs to the DNA glycosylase MPG family - - 3.2.2.21 ko:K03652 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Pur_DNA_glyco YYD2_k127_4595184_8 1089547.KB913013_gene134 5.323e-35 138.0 COG0517@1|root,COG0517@2|Bacteria,4PM6K@976|Bacteroidetes,47YG9@768503|Cytophagia 976|Bacteroidetes S Domain in cystathionine beta-synthase and other proteins. - - - - - - - - - - - - CBS YYD2_k127_4595184_6 1205683.CAKR01000010_gene3413 1.547e-46 175.0 COG0680@1|root,COG0680@2|Bacteria,1R3V7@1224|Proteobacteria,1S0IE@1236|Gammaproteobacteria,41EXX@629|Yersinia 1236|Gammaproteobacteria C hydrogenase 3 maturation protease hycI GO:0003674,GO:0003824,GO:0004175,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.23.51 ko:K08315 - - - - ko00000,ko01000,ko01002 - - - HycI YYD2_k127_4595184_9 1123487.KB892864_gene2152 1.224e-32 131.0 2DBX5@1|root,2ZBMB@2|Bacteria,1RHQ7@1224|Proteobacteria 1224|Proteobacteria E Formate hydrogenlyase hycH - - ko:K12145,ko:K15834 - - - - ko00000,ko01000 - - - HycH YYD2_k127_4595184_2 104623.Ser39006_02027 3.365e-107 351.0 COG3260@1|root,COG3260@2|Bacteria,1QUBE@1224|Proteobacteria,1RNUG@1236|Gammaproteobacteria,3ZZN2@613|Serratia 1236|Gammaproteobacteria C NADH ubiquinone oxidoreductase, 20 Kd subunit hyfI GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 - ko:K12144,ko:K14088,ko:K15832 - - - - ko00000,ko01000 - - iECSP_1301.ECSP_3428,iECs_1301.ECs3351 Oxidored_q6 YYD2_k127_4597020_1 321955.AAGP01000009_gene332 0.0001185 49.0 COG1846@1|root,COG1846@2|Bacteria,2GMDI@201174|Actinobacteria,4F8KE@85019|Brevibacteriaceae 201174|Actinobacteria K Transcriptional regulator - - - - - - - - - - - - - YYD2_k127_4597020_0 926569.ANT_22650 3.188e-102 349.0 COG0642@1|root,COG2205@2|Bacteria,2GBIY@200795|Chloroflexi 200795|Chloroflexi T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - - - - - - - - - - HAMP,HATPase_c,HisKA YYD2_k127_4619452_1 626887.J057_06391 1.802e-51 194.0 COG0589@1|root,COG0589@2|Bacteria,1NAHQ@1224|Proteobacteria 1224|Proteobacteria T Universal stress protein - - - - - - - - - - - - Usp YYD2_k127_4619452_0 1121405.dsmv_3003 2.238e-139 464.0 COG3459@1|root,COG3459@2|Bacteria,1MVNX@1224|Proteobacteria,42PFN@68525|delta/epsilon subdivisions,2WJVD@28221|Deltaproteobacteria 28221|Deltaproteobacteria G glycosyltransferase 36 associated - - 2.4.1.20 ko:K00702,ko:K13688 ko00500,ko01100,map00500,map01100 - R00952 RC00049 ko00000,ko00001,ko01000,ko01003 - GH94,GT36,GT84 - Glyco_hydro_36,Glyco_transf_36,Glycoamylase YYD2_k127_4630920_0 927677.ALVU02000001_gene4390 3.39e-95 353.0 COG3227@1|root,COG3227@2|Bacteria,1G3KW@1117|Cyanobacteria 1117|Cyanobacteria E PFAM Thermolysin metallopeptidase, alpha-helical domain - - - - - - - - - - - - FTP,Peptidase_M4,Peptidase_M4_C YYD2_k127_4630920_1 383372.Rcas_2401 1.417e-32 149.0 COG3210@1|root,COG3210@2|Bacteria,2G8VW@200795|Chloroflexi,377DU@32061|Chloroflexia 2|Bacteria M TIGRFAM polymorphic outer membrane protein - - - ko:K21449 - - - - ko00000,ko02000 1.B.40.2 - - Beta_helix,Peptidase_S74 YYD2_k127_4639890_2 926569.ANT_29000 2.859e-15 78.0 COG1030@1|root,COG1030@2|Bacteria 2|Bacteria - - - - - ko:K07403 - - - - ko00000 - - - CLP_protease,NfeD YYD2_k127_4639890_0 1160707.AJIK01000032_gene1480 1.119e-126 419.0 COG0677@1|root,COG0677@2|Bacteria,1TPXY@1239|Firmicutes,4HAFY@91061|Bacilli,26DAP@186818|Planococcaceae 91061|Bacilli M Belongs to the UDP-glucose GDP-mannose dehydrogenase family - - 1.1.1.336 ko:K02472 ko00520,ko05111,map00520,map05111 - R03317 RC00291 ko00000,ko00001,ko01000 - - - UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N YYD2_k127_4639890_3 546271.Selsp_1827 3.198e-11 74.0 COG0726@1|root,COG0726@2|Bacteria,1UYYJ@1239|Firmicutes,4H3MV@909932|Negativicutes 909932|Negativicutes G Polysaccharide deacetylase - - - - - - - - - - - - Polysacc_deac_1 YYD2_k127_4639890_1 926569.ANT_02400 7.802e-71 242.0 COG0381@1|root,COG0381@2|Bacteria,2G7S6@200795|Chloroflexi 200795|Chloroflexi M Belongs to the UDP-N-acetylglucosamine 2-epimerase family - - 5.1.3.14 ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 M00362 R00420 RC00290 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Epimerase_2 YYD2_k127_4642911_2 913865.DOT_4642 1.299e-38 151.0 COG2391@1|root,COG2391@2|Bacteria,1VDTV@1239|Firmicutes,24QRU@186801|Clostridia,266NH@186807|Peptococcaceae 186801|Clostridia S Sulphur transport - - - ko:K07112 - - - - ko00000 - - - Sulf_transp YYD2_k127_4642911_4 646529.Desaci_3272 1.528e-22 99.0 COG2391@1|root,COG2391@2|Bacteria,1VJEX@1239|Firmicutes,25I6C@186801|Clostridia,266AI@186807|Peptococcaceae 186801|Clostridia S Sulphur transport - - - ko:K07112 - - - - ko00000 - - - Sulf_transp YYD2_k127_4642911_5 768706.Desor_3578 1.666e-15 79.0 COG2391@1|root,COG2391@2|Bacteria,1VJEX@1239|Firmicutes,25I6C@186801|Clostridia,266AI@186807|Peptococcaceae 186801|Clostridia S Sulphur transport - - - ko:K07112 - - - - ko00000 - - - Sulf_transp YYD2_k127_4642911_0 646529.Desaci_3271 1.499e-247 784.0 COG0243@1|root,COG0243@2|Bacteria,1TPZG@1239|Firmicutes,247JV@186801|Clostridia,2605J@186807|Peptococcaceae 186801|Clostridia C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - 1.8.5.5,1.8.5.6 ko:K08352,ko:K21307 ko00920,ko01100,ko01120,map00920,map01100,map01120 - R10149,R11487 RC00168,RC02823 ko00000,ko00001,ko01000,ko02000 5.A.3.5 - - Molybdop_Fe4S4,Molybdopterin,Molydop_binding,TAT_signal YYD2_k127_4642911_1 96561.Dole_2251 3.17e-56 205.0 COG0437@1|root,COG0437@2|Bacteria,1MU1B@1224|Proteobacteria,42M97@68525|delta/epsilon subdivisions,2WJB4@28221|Deltaproteobacteria,2MJB7@213118|Desulfobacterales 28221|Deltaproteobacteria C 4Fe-4S dicluster domain hmcB GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - - - - - - - - - - Fer4_11,Fer4_4,Fer4_7 YYD2_k127_4642911_3 1121920.AUAU01000012_gene2648 3.848e-34 135.0 COG5557@1|root,COG5557@2|Bacteria,3Y3RF@57723|Acidobacteria 57723|Acidobacteria C Polysulphide reductase, NrfD - - - - - - - - - - - - NrfD YYD2_k127_4650110_8 264732.Moth_1695 5.867e-09 56.0 COG0809@1|root,COG0809@2|Bacteria,1TPKD@1239|Firmicutes,247NT@186801|Clostridia,42ETD@68295|Thermoanaerobacterales 186801|Clostridia J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) queA - 2.4.99.17 ko:K07568 - - - - ko00000,ko01000,ko03016 - - - Queuosine_synth YYD2_k127_4650110_2 1144275.COCOR_04444 3.59e-79 270.0 COG1573@1|root,COG1573@2|Bacteria,1MW91@1224|Proteobacteria,42SMW@68525|delta/epsilon subdivisions,2WPP1@28221|Deltaproteobacteria,2YUYP@29|Myxococcales 28221|Deltaproteobacteria L uracil-DNA glycosylase - - 3.2.2.27 ko:K21929 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - UDG YYD2_k127_4650110_9 1089547.KB913013_gene634 3.844e-08 55.0 COG1225@1|root,COG1225@2|Bacteria,4NNGK@976|Bacteroidetes,47PUA@768503|Cytophagia 976|Bacteroidetes O PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen bcp - 1.11.1.15 ko:K03564 - - - - ko00000,ko01000 - - - AhpC-TSA YYD2_k127_4650110_6 293826.Amet_3778 1.725e-29 120.0 COG1225@1|root,COG1225@2|Bacteria,1VBNH@1239|Firmicutes,24QGI@186801|Clostridia 186801|Clostridia O Redoxin - - - - - - - - - - - - AhpC-TSA YYD2_k127_4650110_0 926569.ANT_20800 2.138e-96 328.0 COG0215@1|root,COG4242@1|root,COG0215@2|Bacteria,COG4242@2|Bacteria,2G6C3@200795|Chloroflexi 200795|Chloroflexi PQ Belongs to the peptidase S51 family - - - - - - - - - - - - - YYD2_k127_4650110_3 1121918.ARWE01000001_gene2996 1.673e-66 239.0 COG1181@1|root,COG1181@2|Bacteria,1N4F5@1224|Proteobacteria,42NYM@68525|delta/epsilon subdivisions,2WKTX@28221|Deltaproteobacteria,43U6N@69541|Desulfuromonadales 28221|Deltaproteobacteria M ATP-grasp domain - - 6.3.2.4 ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 - R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Dala_Dala_lig_C YYD2_k127_4650110_5 207559.Dde_3044 3.324e-31 127.0 COG0454@1|root,COG0456@2|Bacteria,1MYK6@1224|Proteobacteria,42TT3@68525|delta/epsilon subdivisions,2WQGD@28221|Deltaproteobacteria,2MCMQ@213115|Desulfovibrionales 28221|Deltaproteobacteria K PFAM GCN5-related N-acetyltransferase - - - - - - - - - - - - Acetyltransf_1,Acetyltransf_10,Acetyltransf_7 YYD2_k127_4650110_7 649638.Trad_0291 2.767e-15 77.0 COG1983@1|root,COG1983@2|Bacteria,1WKSH@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus KT PspC domain - - - - - - - - - - - - PspC YYD2_k127_4650110_4 1035308.AQYY01000001_gene2006 1.026e-61 218.0 COG4832@1|root,COG4832@2|Bacteria,1TQC2@1239|Firmicutes,248YH@186801|Clostridia,264ZM@186807|Peptococcaceae 186801|Clostridia S conserved protein (DUF2174) - - - - - - - - - - - - GyrI-like YYD2_k127_4650110_1 479434.Sthe_2042 5.249e-81 284.0 COG0389@1|root,COG0389@2|Bacteria,2G6I6@200795|Chloroflexi,27YX5@189775|Thermomicrobia 189775|Thermomicrobia L impB/mucB/samB family - - 2.7.7.7 ko:K02346 - - - - ko00000,ko01000,ko03400 - - - IMS,IMS_C YYD2_k127_4650110_10 1122609.AUGT01000013_gene4178 6.573e-05 53.0 COG4625@1|root,COG4625@2|Bacteria,2GY9J@201174|Actinobacteria,4DW2W@85009|Propionibacteriales 201174|Actinobacteria S pathogenesis - - - - - - - - - - - - - YYD2_k127_4652152_5 880073.Calab_0285 1.078e-124 410.0 COG1271@1|root,COG1271@2|Bacteria,2NQTY@2323|unclassified Bacteria 2|Bacteria C PFAM Cytochrome bd ubiquinol oxidase, subunit I cydA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0016682,GO:0019646,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0070069,GO:0071944,GO:0097159,GO:1901363 1.10.3.14 ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00153 R11325 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.4.3 - iPC815.YPO1117,iSBO_1134.SBO_2253,iSFxv_1172.SFxv_0621,iS_1188.S0577,iSbBS512_1146.SbBS512_E2337 Cyt_bd_oxida_I YYD2_k127_4652152_4 880073.Calab_0286 1.642e-131 427.0 COG1294@1|root,COG1294@2|Bacteria,2NS31@2323|unclassified Bacteria 2|Bacteria C PFAM Cytochrome bd ubiquinol oxidase, subunit II cydB GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0016682,GO:0019646,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0070069,GO:0071944,GO:0097159,GO:1901363 1.10.3.14 ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00153 R11325 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.4.3 - iECABU_c1320.ECABU_c10120,iLF82_1304.LF82_0101,iNRG857_1313.NRG857_04455,iPC815.YPO1118,iYO844.BSU38750,ic_1306.c1120 Cyt_bd_oxida_II YYD2_k127_4652152_1 765420.OSCT_1692 9.058e-257 832.0 COG4987@1|root,COG4988@1|root,COG4987@2|Bacteria,COG4988@2|Bacteria,2G7JB@200795|Chloroflexi 200795|Chloroflexi CO ABC transporter CydDC cysteine exporter (CydDC-E) family permease ATP-binding protein CydD - - - ko:K16013 ko02010,map02010 - - - ko00000,ko00001,ko02000 3.A.1.129 - - ABC_membrane,ABC_tran YYD2_k127_4652152_2 926569.ANT_09360 9.429e-223 696.0 COG1158@1|root,COG1158@2|Bacteria,2G5UQ@200795|Chloroflexi 200795|Chloroflexi K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template rho - - ko:K03628 ko03018,map03018 - - - ko00000,ko00001,ko03019,ko03021 - - - ATP-synt_ab,Rho_N,Rho_RNA_bind YYD2_k127_4652152_9 926569.ANT_07430 1.784e-67 243.0 COG0739@1|root,COG1388@1|root,COG0739@2|Bacteria,COG1388@2|Bacteria,2G6Q7@200795|Chloroflexi 200795|Chloroflexi M Peptidoglycan-binding LysM - - - - - - - - - - - - LysM,Peptidase_M23,SH3_3 YYD2_k127_4652152_8 926569.ANT_18900 2.895e-69 244.0 COG0340@1|root,COG0340@2|Bacteria,2G6WF@200795|Chloroflexi 200795|Chloroflexi H biotin lipoate A B protein ligase birA - 6.3.4.15 ko:K03524 ko00780,ko01100,map00780,map01100 - R01074,R05145 RC00043,RC00070,RC00096,RC02896 ko00000,ko00001,ko01000,ko03000 - - - BPL_C,BPL_LplA_LipB YYD2_k127_4652152_6 926569.ANT_03930 2.954e-85 290.0 COG1045@1|root,COG1045@2|Bacteria,2G6DI@200795|Chloroflexi 200795|Chloroflexi E TIGRFAM serine O-acetyltransferase cysE - 2.3.1.30 ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 M00021 R00586 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 - - - Hexapep,SATase_N YYD2_k127_4652152_3 748280.NH8B_3175 6.11e-146 469.0 COG0031@1|root,COG0031@2|Bacteria,1MUBE@1224|Proteobacteria,2VJI3@28216|Betaproteobacteria,2KPYW@206351|Neisseriales 206351|Neisseriales E Belongs to the cysteine synthase cystathionine beta- synthase family cysK - 2.5.1.47 ko:K01738 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 M00021 R00897,R03601,R04859 RC00020,RC02814,RC02821 ko00000,ko00001,ko00002,ko01000 - - - PALP YYD2_k127_4652152_0 926569.ANT_03530 0.0 1085.0 COG0188@1|root,COG0188@2|Bacteria,2G5Q2@200795|Chloroflexi 200795|Chloroflexi L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner gyrA - 5.99.1.3 ko:K02469 - - - - ko00000,ko01000,ko03032,ko03400 - - - DNA_gyraseA_C,DNA_topoisoIV YYD2_k127_4652152_7 1382356.JQMP01000003_gene2113 3.821e-76 261.0 COG1960@1|root,COG1960@2|Bacteria,2G65J@200795|Chloroflexi,27Y45@189775|Thermomicrobia 189775|Thermomicrobia C Acyl- CoA dehydrogenase type 2 domain - - - - - - - - - - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N YYD2_k127_4665397_0 926569.ANT_15160 5.049e-239 747.0 COG0515@1|root,COG1520@1|root,COG0515@2|Bacteria,COG1520@2|Bacteria,2G5NM@200795|Chloroflexi 200795|Chloroflexi KLT Serine threonine protein kinase - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PQQ_3,Pkinase YYD2_k127_4665397_3 926569.ANT_15150 5.957e-84 291.0 COG0631@1|root,COG0631@2|Bacteria,2G8RD@200795|Chloroflexi 200795|Chloroflexi T SMART protein phosphatase 2C domain protein - - 3.1.3.16 ko:K20074 - - - - ko00000,ko01000,ko01009 - - - PP2C,PP2C_2 YYD2_k127_4665397_2 926569.ANT_15140 1.715e-116 391.0 COG0484@1|root,COG2304@1|root,COG0484@2|Bacteria,COG2304@2|Bacteria,2G8H5@200795|Chloroflexi 200795|Chloroflexi O PFAM von Willebrand factor type A - - - ko:K07114 - - - - ko00000,ko02000 1.A.13.2.2,1.A.13.2.3 - - VWA YYD2_k127_4665397_4 926569.ANT_15130 1.121e-41 159.0 COG1716@1|root,COG1716@2|Bacteria,2G9CS@200795|Chloroflexi 200795|Chloroflexi T PFAM Forkhead-associated protein - - - - - - - - - - - - FHA YYD2_k127_4665397_7 926569.ANT_15120 8.823e-22 96.0 2EMHG@1|root,33F64@2|Bacteria,2G7IC@200795|Chloroflexi 200795|Chloroflexi - - - - - - - - - - - - - - - YYD2_k127_4665397_1 926569.ANT_15110 2.303e-118 383.0 COG0745@1|root,COG0745@2|Bacteria,2G5ND@200795|Chloroflexi 200795|Chloroflexi K Two component transcriptional regulator, winged helix family - - - ko:K07667,ko:K07668 ko02020,ko02024,map02020,map02024 M00454,M00459 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C YYD2_k127_4665397_5 926550.CLDAP_01300 1.075e-34 140.0 COG0071@1|root,COG0071@2|Bacteria,2G71M@200795|Chloroflexi 200795|Chloroflexi O Belongs to the small heat shock protein (HSP20) family - - - ko:K13993 ko04141,map04141 - - - ko00000,ko00001,ko03110 - - - HSP20 YYD2_k127_4665397_6 755178.Cyan10605_1644 5.392e-23 99.0 COG1943@1|root,COG1943@2|Bacteria,1G5Z6@1117|Cyanobacteria 1117|Cyanobacteria L PFAM Transposase IS200 like - - - - - - - - - - - - Y1_Tnp YYD2_k127_4675331_4 159749.K0R1M2 8.684e-51 190.0 COG1577@1|root,KOG1511@2759|Eukaryota,2XDVQ@2836|Bacillariophyta 2836|Bacillariophyta I GHMP kinases C terminal - - 2.7.1.36 ko:K00869 ko00900,ko01100,ko01110,ko01130,ko04146,map00900,map01100,map01110,map01130,map04146 M00095 R02245 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - GHMP_kinases_C,GHMP_kinases_N YYD2_k127_4675331_3 926569.ANT_13360 2.003e-69 244.0 COG0584@1|root,COG0584@2|Bacteria,2G6YD@200795|Chloroflexi 200795|Chloroflexi C PFAM Glycerophosphoryl diester phosphodiesterase - - 3.1.4.46 ko:K01126 ko00564,map00564 - R01030,R01470 RC00017,RC00425 ko00000,ko00001,ko01000 - - - GDPD YYD2_k127_4675331_2 926569.ANT_13350 2.901e-80 281.0 COG1171@1|root,COG1171@2|Bacteria,2G6ME@200795|Chloroflexi 200795|Chloroflexi E PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit - - 4.3.1.19 ko:K01754 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230 M00570 R00220,R00996 RC00418,RC02600 ko00000,ko00001,ko00002,ko01000 - - - PALP YYD2_k127_4675331_0 926569.ANT_13340 3.835e-260 833.0 COG1472@1|root,COG1472@2|Bacteria,2G7PD@200795|Chloroflexi 200795|Chloroflexi G Glycosyl hydrolase family 3 N terminal domain - - 3.2.1.52 ko:K01207 ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501 M00628 R00022,R05963,R07809,R07810,R10831 RC00049 ko00000,ko00001,ko00002,ko01000 - - - Glyco_hydro_3 YYD2_k127_4675331_1 926569.ANT_13330 4.076e-90 302.0 COG0515@1|root,COG0515@2|Bacteria,2G850@200795|Chloroflexi 200795|Chloroflexi KLT Serine threonine protein kinase - - 2.7.11.1 ko:K08884 - - - - ko00000,ko01000,ko01001 - - - Pkinase YYD2_k127_4686685_0 1198452.Jab_2c25790 3.647e-90 303.0 COG0789@1|root,COG0789@2|Bacteria,1REB7@1224|Proteobacteria,2WEJ4@28216|Betaproteobacteria 28216|Betaproteobacteria K helix_turn_helix, mercury resistance - - - - - - - - - - - - MerR_1,TipAS YYD2_k127_4686685_5 926569.ANT_18630 4.869e-53 207.0 COG0564@1|root,COG0564@2|Bacteria,2G68N@200795|Chloroflexi 200795|Chloroflexi J Responsible for synthesis of pseudouridine from uracil - - 5.4.99.28,5.4.99.29 ko:K06177 - - - - ko00000,ko01000,ko03009,ko03016 - - - PseudoU_synth_2 YYD2_k127_4686685_4 926569.ANT_16090 1.64e-60 215.0 COG0491@1|root,COG0491@2|Bacteria,2G6X9@200795|Chloroflexi 200795|Chloroflexi S beta-lactamase domain protein - - - - - - - - - - - - Lactamase_B YYD2_k127_4686685_1 926569.ANT_16080 2.686e-85 295.0 COG0477@1|root,COG2814@2|Bacteria 2|Bacteria EGP Major facilitator Superfamily - - - - - - - - - - - - MFS_1,MFS_1_like,MFS_3,Sugar_tr YYD2_k127_4686685_3 744872.Spica_0914 1.335e-68 242.0 COG1647@1|root,COG1647@2|Bacteria 2|Bacteria M Serine aminopeptidase, S33 yvaK - 3.1.1.1 ko:K03928 - - - - ko00000,ko01000 - - - Hydrolase_4 YYD2_k127_4686685_2 383372.Rcas_2586 1.991e-83 296.0 COG0471@1|root,COG0490@1|root,COG0471@2|Bacteria,COG0490@2|Bacteria,2G7T5@200795|Chloroflexi,376QR@32061|Chloroflexia 32061|Chloroflexia P Citrate transporter - - - - - - - - - - - - CitMHS,TrkA_C YYD2_k127_4687607_1 1192034.CAP_8276 1.646e-97 351.0 COG1520@1|root,COG3055@1|root,COG1520@2|Bacteria,COG3055@2|Bacteria,1R0E4@1224|Proteobacteria,43EEC@68525|delta/epsilon subdivisions,2X84M@28221|Deltaproteobacteria,2YUU3@29|Myxococcales 28221|Deltaproteobacteria S FG-GAP repeat - - - - - - - - - - - - FG-GAP_2 YYD2_k127_4687607_0 1128421.JAGA01000002_gene774 3.555e-159 521.0 COG1164@1|root,COG1164@2|Bacteria,2NNUU@2323|unclassified Bacteria 2|Bacteria E Oligopeptidase F pepF - - - - - - - - - - - Peptidase_M3,Peptidase_M3_N YYD2_k127_4690057_0 926569.ANT_22190 2.726e-87 318.0 COG1572@1|root,COG1572@2|Bacteria,2G9M8@200795|Chloroflexi 2|Bacteria S Ig-like domain from next to BRCA1 gene - - - - - - - - - - - - DUF11,N_BRCA1_IG YYD2_k127_4690057_1 926569.ANT_14130 3.511e-19 103.0 COG1572@1|root,COG1572@2|Bacteria,2G9M8@200795|Chloroflexi 2|Bacteria S Ig-like domain from next to BRCA1 gene - - - ko:K13276 - - - - ko00000,ko01000,ko01002,ko03110 - - - CARDB,Cadherin-like,DUF4091 YYD2_k127_4690057_2 316274.Haur_2770 1.215e-09 65.0 COG3509@1|root,COG3509@2|Bacteria,2G80N@200795|Chloroflexi 200795|Chloroflexi Q TIGRFAM esterase, PHB depolymerase family - - - - - - - - - - - - Esterase_phd YYD2_k127_4737541_1 1183438.GKIL_2156 3.604e-20 99.0 COG1216@1|root,COG1216@2|Bacteria,1G3T8@1117|Cyanobacteria 1117|Cyanobacteria S Uncharacterised nucleotidyltransferase - - - - - - - - - - - - NTP_transf_5 YYD2_k127_4737541_0 584708.Apau_0898 1.871e-97 341.0 COG1132@1|root,COG1132@2|Bacteria,3TAG9@508458|Synergistetes 508458|Synergistetes V ABC transporter transmembrane region - - - ko:K11085 ko02010,map02010 - - - ko00000,ko00001,ko01000,ko02000 3.A.1.106 - - ABC_membrane,ABC_tran YYD2_k127_4754487_3 1122223.KB890700_gene1977 6.629e-31 124.0 COG0452@1|root,COG0452@2|Bacteria,1WIH0@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine coaBC - 4.1.1.36,6.3.2.5 ko:K13038 ko00770,ko01100,map00770,map01100 M00120 R03269,R04231 RC00064,RC00090,RC00822 ko00000,ko00001,ko00002,ko01000 - - - DFP,Flavoprotein YYD2_k127_4754487_0 926569.ANT_11910 3.718e-75 261.0 COG0639@1|root,COG0639@2|Bacteria,2G6GC@200795|Chloroflexi 200795|Chloroflexi T PFAM metallophosphoesterase - - - - - - - - - - - - Metallophos_2 YYD2_k127_4754487_1 926569.ANT_11900 7.052e-59 221.0 COG5662@1|root,COG5662@2|Bacteria,2GBKH@200795|Chloroflexi 200795|Chloroflexi K Domain of unknown function (DUF4349) - - - - - - - - - - - - DUF4349 YYD2_k127_4754487_2 926569.ANT_10910 7.099e-36 147.0 COG3221@1|root,COG3221@2|Bacteria 2|Bacteria P organic phosphonate transport phnD - - ko:K02044 ko02010,map02010 M00223 - - ko00000,ko00001,ko00002,ko02000 3.A.1.9 - - Phosphonate-bd YYD2_k127_479411_6 926569.ANT_27990 9.428e-20 91.0 COG0642@1|root,COG0745@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria 926569.ANT_27990|- T PhoQ Sensor - - - - - - - - - - - - - YYD2_k127_479411_4 886293.Sinac_5467 1.848e-24 117.0 COG1835@1|root,COG1835@2|Bacteria,2J4RC@203682|Planctomycetes 203682|Planctomycetes I Acyltransferase family - - - - - - - - - - - - Acyl_transf_3 YYD2_k127_479411_7 518766.Rmar_0390 1.762e-14 81.0 COG0500@1|root,COG2226@2|Bacteria 2|Bacteria Q methyltransferase - - - - - - - - - - - - Methyltransf_11 YYD2_k127_479411_2 1317122.ATO12_18095 7.375e-79 278.0 COG0463@1|root,COG0463@2|Bacteria,4PM7S@976|Bacteroidetes,1IMR6@117743|Flavobacteriia,2YIFS@290174|Aquimarina 976|Bacteroidetes M Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 YYD2_k127_479411_0 926569.ANT_25740 1.437e-131 447.0 COG0863@1|root,COG0863@2|Bacteria 2|Bacteria L N-4 methylation of cytosine - - 2.1.1.113 ko:K00590 - - - - ko00000,ko01000,ko02048 - - - - YYD2_k127_479411_5 926569.ANT_22190 2.39e-22 105.0 COG1572@1|root,COG1572@2|Bacteria,2G9M8@200795|Chloroflexi 2|Bacteria S Ig-like domain from next to BRCA1 gene - - - - - - - - - - - - DUF11,N_BRCA1_IG YYD2_k127_479411_1 1121406.JAEX01000003_gene1727 6.7e-114 376.0 COG1149@1|root,COG1149@2|Bacteria,1R7VQ@1224|Proteobacteria,42QBU@68525|delta/epsilon subdivisions,2WMIM@28221|Deltaproteobacteria,2MH9Y@213115|Desulfovibrionales 28221|Deltaproteobacteria C 4Fe-4S binding domain - - - - - - - - - - - - Fer4 YYD2_k127_479411_3 926569.ANT_03460 5.283e-43 162.0 COG1164@1|root,COG1164@2|Bacteria,2G5JB@200795|Chloroflexi 200795|Chloroflexi E PFAM peptidase M3A and M3B, thimet oligopeptidase F - - - ko:K08602 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M3,Peptidase_M3_N YYD2_k127_479411_8 56780.SYN_00934 1.382e-09 66.0 COG0427@1|root,COG1670@1|root,COG0427@2|Bacteria,COG1670@2|Bacteria,1MUGE@1224|Proteobacteria,42MHC@68525|delta/epsilon subdivisions,2WINZ@28221|Deltaproteobacteria,2MR2F@213462|Syntrophobacterales 28221|Deltaproteobacteria C acetyl-CoA - - - - - - - - - - - - AcetylCoA_hyd_C,AcetylCoA_hydro,Acetyltransf_1 YYD2_k127_4794761_0 926569.ANT_13770 1.282e-270 842.0 COG0056@1|root,COG0056@2|Bacteria,2G5YQ@200795|Chloroflexi 200795|Chloroflexi F Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit atpA - 3.6.3.14 ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194,ko01000 3.A.2.1 - - ATP-synt_ab,ATP-synt_ab_C,ATP-synt_ab_N YYD2_k127_4794761_1 926569.ANT_13780 2.281e-97 326.0 COG0224@1|root,COG0224@2|Bacteria,2G69I@200795|Chloroflexi 200795|Chloroflexi C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex atpG - - ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - ATP-synt YYD2_k127_4794761_2 926569.ANT_13790 3.103e-55 197.0 COG0055@1|root,COG0055@2|Bacteria,2G5JI@200795|Chloroflexi 200795|Chloroflexi F Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits atpD - 3.6.3.14 ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194,ko01000 3.A.2.1 - - ATP-synt_ab,ATP-synt_ab_N YYD2_k127_4803249_6 926569.ANT_10080 6.904e-43 157.0 COG0185@1|root,COG0185@2|Bacteria,2G6US@200795|Chloroflexi 200795|Chloroflexi J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA rpsS GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - ko:K02965 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S19 YYD2_k127_4803249_7 926569.ANT_10090 2.267e-39 150.0 COG0091@1|root,COG0091@2|Bacteria,2G6ZQ@200795|Chloroflexi 200795|Chloroflexi J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome rplV GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02890 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L22 YYD2_k127_4803249_0 926569.ANT_10100 1.173e-94 316.0 COG0092@1|root,COG0092@2|Bacteria,2G691@200795|Chloroflexi 200795|Chloroflexi J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation rpsC GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02982 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - KH_2,Ribosomal_S3_C YYD2_k127_4803249_2 926569.ANT_10110 2.22e-68 234.0 COG0197@1|root,COG0197@2|Bacteria,2G6NA@200795|Chloroflexi 200795|Chloroflexi J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs rplP GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - ko:K02878 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L16 YYD2_k127_4803249_11 926569.ANT_10120 7.236e-13 71.0 COG0255@1|root,COG0255@2|Bacteria 2|Bacteria J Belongs to the universal ribosomal protein uL29 family rpmC GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02904 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L29 YYD2_k127_4803249_9 926569.ANT_10130 1.965e-29 121.0 COG0186@1|root,COG0186@2|Bacteria,2G722@200795|Chloroflexi 200795|Chloroflexi J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA rpsQ - - ko:K02961 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S17 YYD2_k127_4803249_4 926569.ANT_10140 2.024e-62 216.0 COG0093@1|root,COG0093@2|Bacteria,2G6MZ@200795|Chloroflexi 200795|Chloroflexi J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome rplN GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - ko:K02874 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L14 YYD2_k127_4803249_5 926569.ANT_10150 2.692e-43 162.0 COG0198@1|root,COG0198@2|Bacteria,2G750@200795|Chloroflexi 200795|Chloroflexi J One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit rplX GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02895 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - KOW,ribosomal_L24 YYD2_k127_4803249_1 926569.ANT_10160 4.644e-81 274.0 COG0094@1|root,COG0094@2|Bacteria,2G6C6@200795|Chloroflexi 200795|Chloroflexi J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits rplE GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02931 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L5,Ribosomal_L5_C YYD2_k127_4803249_10 926569.ANT_10170 7.031e-27 109.0 COG0199@1|root,COG0199@2|Bacteria,2G74J@200795|Chloroflexi 200795|Chloroflexi J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site rpsN GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02954 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S14 YYD2_k127_4803249_3 926569.ANT_10180 9.439e-63 218.0 COG0096@1|root,COG0096@2|Bacteria,2G6XS@200795|Chloroflexi 200795|Chloroflexi J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit rpsH GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02994 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S8 YYD2_k127_4803249_8 926569.ANT_10190 2.696e-32 128.0 COG0097@1|root,COG0097@2|Bacteria,2G6HZ@200795|Chloroflexi 200795|Chloroflexi J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center rplF GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02933 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L6 YYD2_k127_4812179_2 926569.ANT_17620 1.486e-26 114.0 COG1309@1|root,COG1309@2|Bacteria,2G7DR@200795|Chloroflexi 200795|Chloroflexi K PFAM regulatory protein TetR - - - - - - - - - - - - TetR_C_4,TetR_N YYD2_k127_4812179_1 1122138.AQUZ01000044_gene4502 5.518e-71 252.0 COG0701@1|root,COG0701@2|Bacteria,2HZBT@201174|Actinobacteria 201174|Actinobacteria S Predicted permease - - - - - - - - - - - - ArsP_1 YYD2_k127_4812179_0 926550.CLDAP_37010 6.983e-73 254.0 COG0500@1|root,COG2226@2|Bacteria,2G6GD@200795|Chloroflexi 200795|Chloroflexi Q Methyltransferase type 11 - - 2.1.1.137 ko:K07755 - - - - ko00000,ko01000 - - - Methyltransf_31 YYD2_k127_4823428_1 926569.ANT_08340 4.087e-182 579.0 COG1894@1|root,COG1894@2|Bacteria,2G5W1@200795|Chloroflexi 200795|Chloroflexi C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain nuoF - 1.6.5.3 ko:K00335 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Complex1_51K,NADH_4Fe-4S,SLBB YYD2_k127_4823428_2 926569.ANT_08330 1.155e-66 230.0 COG1905@1|root,COG1905@2|Bacteria,2G70Y@200795|Chloroflexi 200795|Chloroflexi C PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit - - 1.6.5.3 ko:K00334 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - 2Fe-2S_thioredx YYD2_k127_4823428_0 926569.ANT_08320 3.161e-202 636.0 COG0649@1|root,COG0649@2|Bacteria,2G5MM@200795|Chloroflexi 200795|Chloroflexi C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoD - 1.6.5.3 ko:K00333 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Complex1_49kDa YYD2_k127_4823428_3 926569.ANT_08310 2.905e-56 201.0 COG0852@1|root,COG0852@2|Bacteria,2G6WD@200795|Chloroflexi 200795|Chloroflexi C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoC - 1.6.5.3 ko:K00332 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Complex1_30kDa YYD2_k127_4823428_4 926569.ANT_08300 4.695e-10 60.0 COG0377@1|root,COG0377@2|Bacteria,2G6GB@200795|Chloroflexi 200795|Chloroflexi C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoB1 - 1.6.5.3 ko:K00331 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q6 YYD2_k127_4857001_1 278963.ATWD01000001_gene2540 2.688e-30 135.0 COG2120@1|root,COG2120@2|Bacteria 2|Bacteria S N-acetylglucosaminylinositol deacetylase activity - - - - - - - - - - - - PIG-L YYD2_k127_4857001_0 926569.ANT_15020 5.992e-98 335.0 COG0477@1|root,COG2814@2|Bacteria,2G71K@200795|Chloroflexi 200795|Chloroflexi EGP PFAM major facilitator superfamily MFS_1 - - - - - - - - - - - - MFS_1 YYD2_k127_4857001_2 1304880.JAGB01000001_gene596 1.514e-10 63.0 COG2120@1|root,COG2120@2|Bacteria,1UYGC@1239|Firmicutes,25D0S@186801|Clostridia 186801|Clostridia S GlcNAc-PI de-N-acetylase - - - - - - - - - - - - PIG-L YYD2_k127_485852_0 926569.ANT_04140 4.779e-311 959.0 COG0542@1|root,COG0542@2|Bacteria,2G62D@200795|Chloroflexi 200795|Chloroflexi O ATPase associated with various cellular activities, AAA_5 - - - ko:K03696 ko01100,map01100 - - - ko00000,ko03110 - - - AAA,AAA_2,ClpB_D2-small,Clp_N YYD2_k127_485852_11 926569.ANT_04150 7.858e-52 196.0 COG0454@1|root,COG0456@2|Bacteria,2G9GA@200795|Chloroflexi 200795|Chloroflexi K Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_1 YYD2_k127_485852_18 525904.Tter_1090 2.044e-21 98.0 COG1950@1|root,COG1950@2|Bacteria,2NQ43@2323|unclassified Bacteria 2|Bacteria S Mycobacterial 4 TMS phage holin, superfamily IV yvlD - - ko:K08972 - - - - ko00000 - - - Phage_holin_4_2 YYD2_k127_485852_5 926569.ANT_18600 7.211e-105 351.0 COG3191@1|root,COG3191@2|Bacteria,2G6BG@200795|Chloroflexi 200795|Chloroflexi EQ PFAM peptidase S58, DmpA - - - - - - - - - - - - Peptidase_S58 YYD2_k127_485852_6 926569.ANT_14100 1.323e-96 329.0 COG0628@1|root,COG0628@2|Bacteria,2G6TV@200795|Chloroflexi 200795|Chloroflexi S AI-2E family transporter - - - - - - - - - - - - AI-2E_transport YYD2_k127_485852_10 926569.ANT_13760 3.523e-53 193.0 COG0632@1|root,COG0632@2|Bacteria,2G6V7@200795|Chloroflexi 200795|Chloroflexi L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB ruvA - 3.6.4.12 ko:K03550 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - HHH_5,RuvA_C,RuvA_N YYD2_k127_485852_3 686340.Metal_0046 2.355e-174 552.0 COG0798@1|root,COG0798@2|Bacteria,1MUXY@1224|Proteobacteria,1RP2I@1236|Gammaproteobacteria,1XF21@135618|Methylococcales 135618|Methylococcales P PFAM Bile acid sodium symporter - - - ko:K03325 - - - - ko00000,ko02000 2.A.59 - - SBF YYD2_k127_485852_19 1210046.B277_02681 9.802e-20 92.0 COG3339@1|root,COG3339@2|Bacteria,2IR8D@201174|Actinobacteria,4FJD6@85021|Intrasporangiaceae 201174|Actinobacteria S Conserved Protein - - - - - - - - - - - - - YYD2_k127_485852_13 926569.ANT_00450 9.675e-43 160.0 COG0394@1|root,COG0394@2|Bacteria,2G6TY@200795|Chloroflexi 200795|Chloroflexi T Low molecular weight phosphotyrosine protein phosphatase arsC - 1.20.4.1 ko:K03741 - - - - ko00000,ko01000 - - - HTH_5,LMWPc YYD2_k127_485852_1 1476973.JMMB01000007_gene1985 5.04e-198 634.0 COG0003@1|root,COG0003@2|Bacteria,1TQZP@1239|Firmicutes,249JN@186801|Clostridia,25T55@186804|Peptostreptococcaceae 186801|Clostridia D Anion-transporting ATPase arsA - 3.6.3.16 ko:K01551 - - - - ko00000,ko01000,ko02000 3.A.19.1,3.A.21.1,3.A.4.1 - - ArsA_ATPase YYD2_k127_485852_16 555079.Toce_0184 1.97e-24 106.0 2DMHQ@1|root,32RMG@2|Bacteria,1VB95@1239|Firmicutes,24RY3@186801|Clostridia 186801|Clostridia S Arsenical resistance operon trans-acting repressor ArsD - - - - - - - - - - - - ArsD YYD2_k127_485852_14 926569.ANT_03520 5.764e-32 130.0 COG0640@1|root,COG0640@2|Bacteria,2G980@200795|Chloroflexi 200795|Chloroflexi K helix_turn_helix, Arsenical Resistance Operon Repressor - - - ko:K21903 - - - - ko00000,ko03000 - - - HTH_5 YYD2_k127_485852_12 926569.ANT_13740 6.281e-51 184.0 COG0817@1|root,COG0817@2|Bacteria,2G6MA@200795|Chloroflexi 200795|Chloroflexi L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group ruvC GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 ko:K01159 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - RuvC YYD2_k127_485852_7 926569.ANT_13730 7.073e-92 309.0 COG0217@1|root,COG0217@2|Bacteria,2G6AI@200795|Chloroflexi 200795|Chloroflexi K transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - - - - - - - - - - Transcrip_reg YYD2_k127_485852_9 926569.ANT_18610 1.024e-74 260.0 COG1307@1|root,COG1307@2|Bacteria 2|Bacteria S lipid binding purD - - - - - - - - - - - DegV YYD2_k127_485852_8 1521187.JPIM01000001_gene834 1.718e-79 282.0 COG0454@1|root,COG0456@2|Bacteria 2|Bacteria K acetyltransferase yghO - - - - - - - - - - - Acetyltransf_1 YYD2_k127_485852_2 383372.Rcas_4054 2.565e-190 604.0 COG0477@1|root,COG2814@2|Bacteria,2G71K@200795|Chloroflexi 200795|Chloroflexi EGP PFAM major facilitator superfamily MFS_1 - - - - - - - - - - - - MFS_1 YYD2_k127_485852_4 926569.ANT_23180 4.986e-124 411.0 COG0420@1|root,COG0420@2|Bacteria,2G60M@200795|Chloroflexi 200795|Chloroflexi L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity sbcD - - ko:K03547 - - - - ko00000,ko03400 - - - Metallophos YYD2_k127_485852_15 525903.Taci_1495 8.978e-30 122.0 COG0399@1|root,COG0399@2|Bacteria 2|Bacteria E UDP-4-amino-4-deoxy-L-arabinose aminotransferase - - 2.6.1.102 ko:K13010 ko00520,map00520 - R10460 RC00006,RC00781 ko00000,ko00001,ko01000,ko01005,ko01007 - - - 23S_rRNA_IVP YYD2_k127_4872802_0 926569.ANT_26960 2.918e-46 179.0 2EH75@1|root,33AYZ@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - YYD2_k127_4872802_1 324602.Caur_2859 5.507e-36 141.0 COG1893@1|root,COG1893@2|Bacteria 2|Bacteria H 2-dehydropantoate 2-reductase activity panE - 1.1.1.169 ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R02472 RC00726 ko00000,ko00001,ko00002,ko01000 - - - ApbA,ApbA_C YYD2_k127_4891084_7 926569.ANT_03650 2.136e-41 158.0 COG0671@1|root,COG0671@2|Bacteria 2|Bacteria I phosphatidate phosphatase activity - - 3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 ko:K01096,ko:K19302 ko00550,ko00564,ko01100,map00550,map00564,map01100 - R02029,R05627 RC00002,RC00017 ko00000,ko00001,ko01000,ko01011 - - - PAP2 YYD2_k127_4891084_5 926569.ANT_03640 5.686e-59 216.0 COG0746@1|root,COG0746@2|Bacteria 2|Bacteria H molybdenum cofactor guanylyltransferase activity mobA GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.77 ko:K03752,ko:K13818 ko00790,ko01100,map00790,map01100 - R11581 - ko00000,ko00001,ko01000 - - - NTP_transf_3 YYD2_k127_4891084_4 926569.ANT_03630 1.381e-106 357.0 COG5322@1|root,COG5322@2|Bacteria,2G8N0@200795|Chloroflexi 200795|Chloroflexi S PFAM Shikimate quinate 5-dehydrogenase - - - - - - - - - - - - Shikimate_DH YYD2_k127_4891084_6 240015.ACP_2245 6.705e-43 167.0 COG2324@1|root,COG2324@2|Bacteria,3Y7JJ@57723|Acidobacteria,2JMRQ@204432|Acidobacteriia 204432|Acidobacteriia S Carotenoid biosynthesis protein - - - - - - - - - - - - Caroten_synth YYD2_k127_4891084_9 525904.Tter_0583 3.875e-30 135.0 2AZDP@1|root,31RMA@2|Bacteria,2NRKB@2323|unclassified Bacteria 2|Bacteria S Protein of unknown function (DUF4230) - - - - - - - - - - - - DUF4230 YYD2_k127_4891084_8 926569.ANT_10910 4.229e-33 143.0 COG3221@1|root,COG3221@2|Bacteria 2|Bacteria P organic phosphonate transport phnD - - ko:K02044 ko02010,map02010 M00223 - - ko00000,ko00001,ko00002,ko02000 3.A.1.9 - - Phosphonate-bd YYD2_k127_4891084_0 357808.RoseRS_0214 1.84e-250 783.0 COG1884@1|root,COG1884@2|Bacteria,2G62T@200795|Chloroflexi,374XE@32061|Chloroflexia 32061|Chloroflexia I TIGRFAM methylmalonyl-CoA mutase, large subunit - - 5.4.99.2 ko:K01848 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00375,M00376,M00741 R00833 RC00395 ko00000,ko00001,ko00002,ko01000 - - - MM_CoA_mutase YYD2_k127_4891084_2 926569.ANT_01840 3.196e-129 420.0 COG0205@1|root,COG0205@2|Bacteria,2G62R@200795|Chloroflexi 200795|Chloroflexi H Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis pfkA - 2.7.1.11 ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 M00001,M00345 R00756,R03236,R03237,R03238,R03239,R04779 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 - - - PFK YYD2_k127_4891084_1 204669.Acid345_1623 7.108e-202 634.0 COG0205@1|root,COG0205@2|Bacteria,3Y4A9@57723|Acidobacteria,2JKQ8@204432|Acidobacteriia 204432|Acidobacteriia G Phosphofructokinase - - 2.7.1.11,2.7.1.90 ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130 - R00756,R00764,R02073,R03236,R04779 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PFK YYD2_k127_4891084_3 926569.ANT_05010 9.566e-128 415.0 COG1234@1|root,COG1234@2|Bacteria,2G6YW@200795|Chloroflexi 200795|Chloroflexi S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA rnz - 3.1.26.11 ko:K00784 ko03013,map03013 - - - ko00000,ko00001,ko01000,ko03016 - - - Lactamase_B_2 YYD2_k127_4903377_1 926569.ANT_19050 2.933e-39 153.0 COG0494@1|root,COG1194@1|root,COG0494@2|Bacteria,COG1194@2|Bacteria,2G62P@200795|Chloroflexi 200795|Chloroflexi L HhH-GPD family mutY - - ko:K03575 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - EndIII_4Fe-2S,HhH-GPD,NUDIX_4 YYD2_k127_4903377_0 926569.ANT_20880 8.405e-99 336.0 COG1011@1|root,COG1011@2|Bacteria,2G74Q@200795|Chloroflexi 200795|Chloroflexi S DinB superfamily - - - - - - - - - - - - DinB_2 YYD2_k127_4922805_3 1313172.YM304_01540 4.844e-39 149.0 COG1079@1|root,COG1079@2|Bacteria,2GKMB@201174|Actinobacteria 201174|Actinobacteria S Belongs to the binding-protein-dependent transport system permease family - - - ko:K02057 - M00221 - - ko00000,ko00002,ko02000 3.A.1.2 - - BPD_transp_2 YYD2_k127_4922805_1 1313172.YM304_01550 1.704e-100 340.0 COG4603@1|root,COG4603@2|Bacteria,2GKAZ@201174|Actinobacteria 201174|Actinobacteria S Belongs to the binding-protein-dependent transport system permease family - - - ko:K02057 - M00221 - - ko00000,ko00002,ko02000 3.A.1.2 - - BPD_transp_2 YYD2_k127_4922805_2 321332.CYB_1202 4.492e-97 327.0 COG1079@1|root,COG1079@2|Bacteria,1G3PD@1117|Cyanobacteria,1H0T0@1129|Synechococcus 1117|Cyanobacteria P Belongs to the binding-protein-dependent transport system permease family - - - ko:K02057 - M00221 - - ko00000,ko00002,ko02000 3.A.1.2 - - BPD_transp_2 YYD2_k127_4922805_0 864702.OsccyDRAFT_1416 1.856e-106 355.0 COG4603@1|root,COG4603@2|Bacteria 2|Bacteria L Belongs to the binding-protein-dependent transport system permease family - - - ko:K02057 - M00221 - - ko00000,ko00002,ko02000 3.A.1.2 - - BPD_transp_2 YYD2_k127_4970250_0 702113.PP1Y_AT23375 0.0 1062.0 COG3459@1|root,COG3459@2|Bacteria,1MVNX@1224|Proteobacteria,2TSAJ@28211|Alphaproteobacteria,2K0DW@204457|Sphingomonadales 204457|Sphingomonadales G Glycosyl hydrolase 36 superfamily, catalytic domain - - - ko:K13688 - - - - ko00000,ko01000,ko01003 - GH94,GT84 - Glyco_hydro_36,Glyco_transf_36,Glycoamylase YYD2_k127_5012859_2 926569.ANT_18920 3.266e-61 216.0 COG0330@1|root,COG0330@2|Bacteria 2|Bacteria O stress-induced mitochondrial fusion - - - - - - - - - - - - Band_7 YYD2_k127_5012859_0 926569.ANT_09430 5.473e-137 442.0 COG0709@1|root,COG0709@2|Bacteria,2G5W4@200795|Chloroflexi 200795|Chloroflexi H Synthesizes selenophosphate from selenide and ATP selD - 2.7.9.3 ko:K01008 ko00450,ko01100,map00450,map01100 - R03595 RC00002,RC02878 ko00000,ko00001,ko01000,ko03016 - - - AIRS,AIRS_C YYD2_k127_5012859_1 402777.KB235904_gene4345 2.842e-131 432.0 COG1253@1|root,COG1253@2|Bacteria,1G16U@1117|Cyanobacteria,1H75A@1150|Oscillatoriales 1117|Cyanobacteria S PFAM CBS domain - - - ko:K03699 - - - - ko00000,ko02042 - - - CBS,CorC_HlyC,DUF21 YYD2_k127_501603_0 926569.ANT_25700 0.0 1096.0 COG0265@1|root,COG0642@1|root,COG2203@1|root,COG0265@2|Bacteria,COG2203@2|Bacteria,COG2205@2|Bacteria,2G7SE@200795|Chloroflexi 200795|Chloroflexi T histidine kinase A domain protein - - - - - - - - - - - - GAF_2,HATPase_c,HisKA YYD2_k127_501603_2 926569.ANT_25690 1.747e-79 279.0 COG3287@1|root,COG3287@2|Bacteria,2G7G0@200795|Chloroflexi 200795|Chloroflexi S FIST N domain - - - - - - - - - - - - FIST,FIST_C YYD2_k127_501603_1 555079.Toce_0772 3.537e-169 547.0 COG0495@1|root,COG0495@2|Bacteria,1TP0Y@1239|Firmicutes,2484Y@186801|Clostridia,42ER6@68295|Thermoanaerobacterales 186801|Clostridia J Belongs to the class-I aminoacyl-tRNA synthetase family leuS - 6.1.1.4 ko:K01869 ko00970,map00970 M00359,M00360 R03657 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - Anticodon_1,tRNA-synt_1,tRNA-synt_1_2 YYD2_k127_5022823_2 1121920.AUAU01000002_gene2100 5.053e-55 195.0 COG2759@1|root,COG2759@2|Bacteria,3Y338@57723|Acidobacteria 57723|Acidobacteria F Formate--tetrahydrofolate ligase - - 6.3.4.3 ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R00943 RC00026,RC00111 ko00000,ko00001,ko00002,ko01000 - - - FTHFS YYD2_k127_5022823_3 391625.PPSIR1_07178 1.374e-43 179.0 COG1262@1|root,COG1262@2|Bacteria,1MZ25@1224|Proteobacteria,42PUT@68525|delta/epsilon subdivisions,2WKN0@28221|Deltaproteobacteria,2YVT8@29|Myxococcales 28221|Deltaproteobacteria KLT Sulfatase-modifying factor enzyme 1 - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - FGE-sulfatase,Pkinase YYD2_k127_5022823_1 926550.CLDAP_07690 2.95e-103 346.0 COG1131@1|root,COG1131@2|Bacteria,2G7U7@200795|Chloroflexi 200795|Chloroflexi V PFAM ABC transporter related - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran YYD2_k127_5022823_0 926550.CLDAP_07700 2.394e-110 368.0 COG1131@1|root,COG1131@2|Bacteria,2G7Q5@200795|Chloroflexi 200795|Chloroflexi V ATPases associated with a variety of cellular activities - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran YYD2_k127_5022823_5 913865.DOT_4409 8.102e-11 63.0 COG0845@1|root,COG0845@2|Bacteria,1V0ZP@1239|Firmicutes,24DH2@186801|Clostridia,261UT@186807|Peptococcaceae 186801|Clostridia M PFAM HlyD family secretion protein - - - ko:K01993 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 YYD2_k127_5094439_1 1121403.AUCV01000031_gene2842 1.344e-16 94.0 COG2931@1|root,COG3210@1|root,COG3897@1|root,COG4625@1|root,COG2931@2|Bacteria,COG3210@2|Bacteria,COG3897@2|Bacteria,COG4625@2|Bacteria,1MU7T@1224|Proteobacteria,4345K@68525|delta/epsilon subdivisions,2X15Q@28221|Deltaproteobacteria,2MMPA@213118|Desulfobacterales 28221|Deltaproteobacteria MQU COG2931, RTX toxins and related Ca2 -binding proteins - - - - - - - - - - - - - YYD2_k127_5094439_0 927677.ALVU02000001_gene4390 1.226e-131 476.0 COG3227@1|root,COG3227@2|Bacteria,1G3KW@1117|Cyanobacteria 1117|Cyanobacteria E PFAM Thermolysin metallopeptidase, alpha-helical domain - - - - - - - - - - - - FTP,Peptidase_M4,Peptidase_M4_C YYD2_k127_5121979_6 886293.Sinac_7569 6.448e-53 200.0 COG3119@1|root,COG3119@2|Bacteria 2|Bacteria P arylsulfatase activity - - - - - - - - - - - - Bac_rhamnosid6H,Bac_rhamnosid_C,DUF1501,Sulfatase YYD2_k127_5121979_8 1210884.HG799468_gene13775 6.881e-08 64.0 2EPSC@1|root,33HCV@2|Bacteria,2J2Q4@203682|Planctomycetes 203682|Planctomycetes S Pfam:DUF2029 - - - - - - - - - - - - GT87 YYD2_k127_5121979_0 926569.ANT_06500 3.066e-147 471.0 COG0111@1|root,COG0111@2|Bacteria 2|Bacteria EH 4-phosphoerythronate dehydrogenase activity - - 1.1.1.399,1.1.1.95 ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R01513 RC00031 ko00000,ko00001,ko00002,ko01000,ko04147 - - - 2-Hacid_dh,2-Hacid_dh_C YYD2_k127_5121979_5 661478.OP10G_0619 3.63e-65 242.0 COG3119@1|root,COG3119@2|Bacteria 2|Bacteria P arylsulfatase activity - - - - - - - - - - - - Bac_rhamnosid6H,Bac_rhamnosid_C,DUF1501,Sulfatase YYD2_k127_5121979_1 926569.ANT_06520 7.066e-112 367.0 COG1028@1|root,COG1028@2|Bacteria,2G6IK@200795|Chloroflexi 200795|Chloroflexi IQ PFAM short-chain dehydrogenase reductase SDR - - - - - - - - - - - - adh_short_C2 YYD2_k127_5121979_2 926569.ANT_06530 1.882e-109 360.0 COG2604@1|root,COG2604@2|Bacteria 2|Bacteria S Protein of unknown function DUF115 - - - - - - - - - - - - AbfB,DUF2920,MAF_flag10 YYD2_k127_5121979_4 926569.ANT_06560 5.145e-74 267.0 COG1807@1|root,COG1807@2|Bacteria 2|Bacteria M 4-amino-4-deoxy-L-arabinose transferase activity - - - - - - - - - - - - PMT,PMT_2 YYD2_k127_5121979_3 926569.ANT_06540 2.897e-93 315.0 COG1215@1|root,COG1215@2|Bacteria,2G8MG@200795|Chloroflexi 200795|Chloroflexi M Glycosyltransferase like family 2 - - - - - - - - - - - - Glycos_transf_2 YYD2_k127_5121979_7 926569.ANT_06560 2.312e-19 93.0 COG1807@1|root,COG1807@2|Bacteria 2|Bacteria M 4-amino-4-deoxy-L-arabinose transferase activity - - - - - - - - - - - - PMT,PMT_2 YYD2_k127_5134091_2 641491.DND132_1829 3.295e-52 202.0 COG2199@1|root,COG2202@1|root,COG2202@2|Bacteria,COG3706@2|Bacteria,1NAG0@1224|Proteobacteria,43D84@68525|delta/epsilon subdivisions 1224|Proteobacteria T diguanylate cyclase ydaM GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0016740,GO:0016772,GO:0016779,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042802,GO:0043900,GO:0043902,GO:0044093,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051090,GO:0051091,GO:0051171,GO:0051252,GO:0052621,GO:0060255,GO:0065007,GO:0065009,GO:0080090,GO:1900190,GO:1900192,GO:1900231,GO:1900233,GO:1903506,GO:2000112,GO:2001141 2.7.7.65 ko:K19707,ko:K21088 ko02026,map02026 - - - ko00000,ko00001,ko01000,ko03021 - - - GGDEF,PAS_4,PAS_8,PAS_9 YYD2_k127_5134091_5 411464.DESPIG_01354 1.662e-07 60.0 COG2331@1|root,COG2331@2|Bacteria,1NGC1@1224|Proteobacteria,42W5D@68525|delta/epsilon subdivisions,2WRAY@28221|Deltaproteobacteria,2MD4Z@213115|Desulfovibrionales 28221|Deltaproteobacteria S TIGRFAM regulatory protein, FmdB - - - - - - - - - - - - Zn-ribbon_8 YYD2_k127_5134091_3 204669.Acid345_2783 6.116e-28 115.0 COG3098@1|root,COG3098@2|Bacteria 2|Bacteria S single-species biofilm formation yqcC GO:0008150,GO:0009987,GO:0042710,GO:0044010,GO:0044764,GO:0051704 3.5.1.28,5.1.3.13,5.4.99.26 ko:K01790,ko:K03806,ko:K06175 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R06514 RC01531 ko00000,ko00001,ko00002,ko01000,ko01011,ko03016 - - - DUF446 YYD2_k127_5134091_4 1304865.JAGF01000001_gene3493 1.641e-12 79.0 COG2132@1|root,COG2866@1|root,COG2132@2|Bacteria,COG2866@2|Bacteria 2|Bacteria E metallocarboxypeptidase activity - - 1.16.3.3,1.7.2.1 ko:K00368,ko:K22348,ko:K22349 ko00910,ko01120,map00910,map01120 M00529 R00783,R00785 RC00086 ko00000,ko00001,ko00002,ko01000 - - - Copper-bind,Cu-oxidase,Cu-oxidase_2,Cu-oxidase_3,DUF4396 YYD2_k127_5134091_1 383372.Rcas_1525 3.653e-69 242.0 COG2120@1|root,COG2120@2|Bacteria,2G6FB@200795|Chloroflexi,375NK@32061|Chloroflexia 32061|Chloroflexia S PFAM LmbE family protein - - - - - - - - - - - - PIG-L YYD2_k127_5134091_0 497964.CfE428DRAFT_4452 6.449e-89 302.0 COG1696@1|root,COG1696@2|Bacteria,46TUI@74201|Verrucomicrobia 74201|Verrucomicrobia M PFAM membrane bound O-acyl transferase MBOAT family protein - - - - - - - - - - - - MBOAT YYD2_k127_514403_4 761193.Runsl_3933 1.072e-07 59.0 2BT1E@1|root,32N5K@2|Bacteria,4NV69@976|Bacteroidetes,47S00@768503|Cytophagia 976|Bacteroidetes S Uncharacterised nucleotidyltransferase - - - - - - - - - - - - NTP_transf_5 YYD2_k127_514403_0 56780.SYN_01128 1.572e-157 505.0 COG0399@1|root,COG0399@2|Bacteria,1MUPN@1224|Proteobacteria,42MTX@68525|delta/epsilon subdivisions 1224|Proteobacteria E Belongs to the DegT DnrJ EryC1 family - - - - - - - - - - - - DegT_DnrJ_EryC1 YYD2_k127_514403_2 56780.SYN_01129 1.574e-108 355.0 COG1208@1|root,COG1208@2|Bacteria,1MUYJ@1224|Proteobacteria,42MX5@68525|delta/epsilon subdivisions,2WJEC@28221|Deltaproteobacteria 28221|Deltaproteobacteria JM PFAM Nucleotidyl transferase - - - - - - - - - - - - CBS,NTP_transferase YYD2_k127_514403_1 56780.SYN_01130 2.378e-139 449.0 COG0451@1|root,COG0451@2|Bacteria,1QUEV@1224|Proteobacteria,43BNE@68525|delta/epsilon subdivisions,2WKIX@28221|Deltaproteobacteria,2MS1P@213462|Syntrophobacterales 28221|Deltaproteobacteria M PFAM NAD dependent epimerase dehydratase family - - 4.2.1.46 ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 M00793 R06513 RC00402 ko00000,ko00001,ko00002,ko01000 - - - Epimerase,GDP_Man_Dehyd YYD2_k127_514403_3 926569.ANT_17080 8.034e-26 111.0 COG1086@1|root,COG2148@1|root,COG1086@2|Bacteria,COG2148@2|Bacteria 2|Bacteria M undecaprenyl-phosphate glucose phosphotransferase activity - - 2.7.8.33,2.7.8.35 ko:K02851 - - R08856 RC00002 ko00000,ko01000,ko01003,ko01005 - - - Bac_transf,CoA_binding_3,Glycos_transf_4,LicD YYD2_k127_514964_6 1382303.JPOM01000001_gene324 1.433e-08 58.0 COG0325@1|root,COG0325@2|Bacteria,1MWN7@1224|Proteobacteria,2TR5Z@28211|Alphaproteobacteria,2KFJ9@204458|Caulobacterales 204458|Caulobacterales S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis - - - ko:K06997 - - - - ko00000 - - - Ala_racemase_N YYD2_k127_514964_3 926569.ANT_18460 8.583e-70 247.0 COG1496@1|root,COG1496@2|Bacteria,2G6N5@200795|Chloroflexi 200795|Chloroflexi S Belongs to the multicopper oxidase YfiH RL5 family - - - ko:K05810 - - - - ko00000,ko01000 - - - Cu-oxidase_4 YYD2_k127_514964_2 926569.ANT_18470 4.846e-86 295.0 COG0625@1|root,COG3815@1|root,COG0625@2|Bacteria,COG3815@2|Bacteria,2G73B@200795|Chloroflexi 200795|Chloroflexi O Predicted membrane protein (DUF2085) - - - - - - - - - - - - DUF2085 YYD2_k127_514964_1 926569.ANT_18490 9.859e-100 330.0 COG0785@1|root,COG0785@2|Bacteria,2G6V3@200795|Chloroflexi 200795|Chloroflexi O PFAM cytochrome c biogenesis protein, transmembrane region ccdA - - ko:K06196 - - - - ko00000,ko02000 5.A.1.2 - - DsbD YYD2_k127_514964_0 926569.ANT_18500 1.383e-101 342.0 COG1376@1|root,COG1376@2|Bacteria 2|Bacteria D ErfK ybiS ycfS ynhG family protein - - - - - - - - - - - - DUF5011,YkuD YYD2_k127_514964_4 926569.ANT_18570 2.337e-30 130.0 COG0400@1|root,COG0400@2|Bacteria,2G7EK@200795|Chloroflexi 200795|Chloroflexi S PFAM phospholipase Carboxylesterase - - - ko:K06999 - - - - ko00000 - - - Abhydrolase_2 YYD2_k127_5155629_3 926569.ANT_00880 3.847e-14 73.0 COG0488@1|root,COG0488@2|Bacteria,2G5VD@200795|Chloroflexi 200795|Chloroflexi S PFAM ABC transporter related - - - ko:K06158 - - - - ko00000,ko03012 - - - ABC_tran,ABC_tran_CTD,ABC_tran_Xtn YYD2_k127_5155629_0 926569.ANT_16300 1.298e-105 349.0 COG0345@1|root,COG0345@2|Bacteria,2G5QD@200795|Chloroflexi 200795|Chloroflexi E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline proC - 1.5.1.2 ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 M00015 R01248,R01251,R03291,R03293 RC00054,RC00083 ko00000,ko00001,ko00002,ko01000 - - - F420_oxidored,P5CR_dimer YYD2_k127_5155629_2 105559.Nwat_2544 8.325e-57 210.0 COG1943@1|root,COG1943@2|Bacteria,1RIWM@1224|Proteobacteria,1S7RK@1236|Gammaproteobacteria 1236|Gammaproteobacteria L Transposase IS200 like - - - - - - - - - - - - Y1_Tnp YYD2_k127_5155629_1 926569.ANT_22760 3.772e-59 209.0 COG2223@1|root,COG2223@2|Bacteria 2|Bacteria P nitrite transmembrane transporter activity - - - ko:K02532 - - - - ko00000,ko02000 2.A.1.5 - - MFS_1 YYD2_k127_5158083_5 309801.trd_1320 7.854e-48 181.0 arCOG06048@1|root,31EJQ@2|Bacteria,2G6TM@200795|Chloroflexi,27Z2Z@189775|Thermomicrobia 189775|Thermomicrobia - - - - - - - - - - - - - - - YYD2_k127_5158083_4 158189.SpiBuddy_0632 2.538e-51 192.0 COG1349@1|root,COG1349@2|Bacteria,2JADD@203691|Spirochaetes 203691|Spirochaetes K DeoR C terminal sensor domain - - - - - - - - - - - - DeoRC,HTH_DeoR YYD2_k127_5158083_0 1410620.SHLA_13c000720 3.014e-180 594.0 COG0404@1|root,COG0665@1|root,COG0404@2|Bacteria,COG0665@2|Bacteria,1MUXJ@1224|Proteobacteria,2TRGS@28211|Alphaproteobacteria,4B8TC@82115|Rhizobiaceae 28211|Alphaproteobacteria E Belongs to the GcvT family Sardh GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0005488,GO:0005542,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006520,GO:0006575,GO:0006576,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008480,GO:0009056,GO:0009063,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016491,GO:0016645,GO:0019695,GO:0019752,GO:0019842,GO:0031406,GO:0031974,GO:0033218,GO:0034641,GO:0035999,GO:0036094,GO:0042133,GO:0042135,GO:0042219,GO:0042402,GO:0042426,GO:0042558,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0046483,GO:0046653,GO:0046997,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0055114,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0072341,GO:0097159,GO:0097164,GO:1901052,GO:1901053,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.5.3.19 ko:K19191 ko00760,ko01120,map00760,map01120 - R10102 RC00060,RC00557 ko00000,ko00001,ko01000 - - - DAO,FAO_M,GCV_T,GCV_T_C YYD2_k127_5158083_2 1116369.KB890025_gene5283 1.389e-104 354.0 COG4638@1|root,COG4638@2|Bacteria,1MWXW@1224|Proteobacteria,2TSJ5@28211|Alphaproteobacteria,43GYK@69277|Phyllobacteriaceae 28211|Alphaproteobacteria P Rieske 2Fe-2S - - - ko:K00479 - - - - ko00000 - - - Rieske,Ring_hydroxyl_A YYD2_k127_5158083_3 41431.PCC8801_0885 2.306e-91 313.0 COG0524@1|root,COG0524@2|Bacteria 2|Bacteria G Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway - - 2.1.1.72,2.7.1.15,2.7.1.4 ko:K00571,ko:K00847,ko:K00852 ko00030,ko00051,ko00500,ko00520,ko01100,map00030,map00051,map00500,map00520,map01100 - R00760,R00867,R01051,R02750,R03920 RC00002,RC00017 ko00000,ko00001,ko01000,ko02048 - - - PfkB YYD2_k127_5158083_1 635013.TherJR_0057 1.595e-177 568.0 COG5598@1|root,COG5598@2|Bacteria,1V08E@1239|Firmicutes,24BDE@186801|Clostridia,263XC@186807|Peptococcaceae 186801|Clostridia H Trimethylamine methyltransferase - - 2.1.1.250 ko:K14083 ko00680,ko01120,ko01200,map00680,map01120,map01200 M00563 R09124,R10016 RC00035,RC00732,RC01144,RC02984 ko00000,ko00001,ko00002,ko01000 - - - MTTB YYD2_k127_5158768_1 926569.ANT_24910 8.175e-194 612.0 COG1070@1|root,COG1070@2|Bacteria,2G5QX@200795|Chloroflexi 200795|Chloroflexi G PFAM carbohydrate kinase xylB - 2.7.1.17 ko:K00854 ko00040,ko01100,map00040,map01100 M00014 R01639 RC00002,RC00538 ko00000,ko00001,ko00002,ko01000 - - - FGGY_C,FGGY_N YYD2_k127_5158768_0 1869.MB27_01440 0.0 1219.0 COG3459@1|root,COG3459@2|Bacteria,2IAZ0@201174|Actinobacteria,4DHXT@85008|Micromonosporales 201174|Actinobacteria G Putative carbohydrate binding domain - - 2.4.1.20 ko:K00702 ko00500,ko01100,map00500,map01100 - R00952 RC00049 ko00000,ko00001,ko01000 - GT36 - Glyco_hydro_36,Glyco_transf_36 YYD2_k127_5158768_2 378806.STAUR_5372 5.359e-157 504.0 COG2723@1|root,COG2723@2|Bacteria,1MWG6@1224|Proteobacteria,42UR5@68525|delta/epsilon subdivisions,2WQET@28221|Deltaproteobacteria,2YU29@29|Myxococcales 28221|Deltaproteobacteria G Glycosyl hydrolase family 1 - - 3.2.1.21 ko:K05350 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - - - Glyco_hydro_1 YYD2_k127_5188873_0 439235.Dalk_2094 5.942e-106 369.0 COG0664@1|root,COG1752@1|root,COG0664@2|Bacteria,COG1752@2|Bacteria,1MUM9@1224|Proteobacteria,42RSN@68525|delta/epsilon subdivisions,2WNDI@28221|Deltaproteobacteria,2MPUY@213118|Desulfobacterales 28221|Deltaproteobacteria T Patatin-like phospholipase - - - ko:K07001 - - - - ko00000 - - - Patatin,cNMP_binding YYD2_k127_5188873_2 926569.ANT_14800 1.546e-78 273.0 COG1319@1|root,COG1319@2|Bacteria,2G8QC@200795|Chloroflexi 200795|Chloroflexi C CO dehydrogenase flavoprotein C-terminal domain - - - - - - - - - - - - CO_deh_flav_C,FAD_binding_5 YYD2_k127_5188873_1 1120973.AQXL01000113_gene758 8.558e-87 295.0 COG3845@1|root,COG3845@2|Bacteria,1UYQA@1239|Firmicutes,4HVSH@91061|Bacilli,27882@186823|Alicyclobacillaceae 91061|Bacilli S ABC transporter mglA - 3.6.3.17 ko:K02056,ko:K06400 - M00221 - - ko00000,ko00002,ko01000,ko02000 3.A.1.2 - - ABC_tran YYD2_k127_5203606_14 216594.MMAR_3322 7.591e-66 240.0 COG0022@1|root,COG0022@2|Bacteria,2GKFE@201174|Actinobacteria,233TJ@1762|Mycobacteriaceae 201174|Actinobacteria C Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase - - 1.2.4.1 ko:K00162,ko:K21417 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00307 R00014,R00209,R01699,R03270 RC00004,RC00027,RC00627,RC02742,RC02744,RC02882 br01601,ko00000,ko00001,ko00002,ko01000 - - - Transket_pyr,Transketolase_C YYD2_k127_5203606_16 216594.MMAR_3323 1.171e-63 231.0 COG1071@1|root,COG1071@2|Bacteria,2IBRC@201174|Actinobacteria,234F0@1762|Mycobacteriaceae 201174|Actinobacteria C The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) - - 1.2.4.1 ko:K00161,ko:K21416 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00307 R00014,R00209,R01699,R03270 RC00004,RC00027,RC00627,RC02742,RC02744,RC02882 br01601,ko00000,ko00001,ko00002,ko01000 - - - E1_dh YYD2_k127_5203606_19 1123261.AXDW01000007_gene2372 1.062e-15 82.0 2DSXM@1|root,33HUR@2|Bacteria,1NKYR@1224|Proteobacteria 1224|Proteobacteria - - - - - - - - - - - - - - - YYD2_k127_5203606_2 635013.TherJR_2465 2.669e-171 559.0 COG0531@1|root,COG0531@2|Bacteria,1TQE1@1239|Firmicutes,249N1@186801|Clostridia,260S4@186807|Peptococcaceae 186801|Clostridia E amino acid - - - - - - - - - - - - AA_permease_2 YYD2_k127_5203606_12 1499967.BAYZ01000048_gene2681 8.867e-74 255.0 COG1116@1|root,COG1116@2|Bacteria,2NPDJ@2323|unclassified Bacteria 2|Bacteria P ATPases associated with a variety of cellular activities MA20_28765 - - ko:K02049 - M00188 - - ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 - - ABC_tran YYD2_k127_5203606_4 926569.ANT_07480 4.129e-122 401.0 COG0715@1|root,COG0715@2|Bacteria,2G6E9@200795|Chloroflexi 200795|Chloroflexi P PFAM NMT1 THI5 like domain protein - - - ko:K02051 - M00188 - - ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 - - NMT1 YYD2_k127_5203606_9 926569.ANT_07490 2.657e-85 291.0 COG0600@1|root,COG0600@2|Bacteria,2G6HW@200795|Chloroflexi 200795|Chloroflexi P PFAM binding-protein-dependent transport systems inner membrane component - GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - ko:K02050 - M00188 - - ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 - - BPD_transp_1 YYD2_k127_5203606_18 319225.Plut_0104 1.111e-21 95.0 COG1145@1|root,COG1145@2|Bacteria 2|Bacteria C 4fe-4S ferredoxin, iron-sulfur binding domain protein yfhL - - ko:K03522,ko:K05337 - - - - ko00000,ko04147 - - - Fer4,Fer4_7,HTH_31 YYD2_k127_5203606_15 1480694.DC28_04735 1.675e-64 235.0 COG0454@1|root,COG0456@2|Bacteria 2|Bacteria K acetyltransferase - - - - - - - - - - - - - YYD2_k127_5203606_1 1173022.Cri9333_2953 4.177e-225 706.0 COG2317@1|root,COG2317@2|Bacteria,1G143@1117|Cyanobacteria,1H7AI@1150|Oscillatoriales 1117|Cyanobacteria E Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues cxp - 3.4.17.19 ko:K01299 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M32 YYD2_k127_5203606_0 273068.TTE0781 3.272e-243 772.0 COG0525@1|root,COG0525@2|Bacteria,1TPN4@1239|Firmicutes,248VC@186801|Clostridia,42ET0@68295|Thermoanaerobacterales 186801|Clostridia J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner valS - 6.1.1.9 ko:K01873 ko00970,map00970 M00359,M00360 R03665 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,Val_tRNA-synt_C,tRNA-synt_1 YYD2_k127_5203606_13 926569.ANT_27410 1.539e-69 240.0 COG0525@1|root,COG0525@2|Bacteria,2G5VS@200795|Chloroflexi 200795|Chloroflexi J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner valS - 6.1.1.9 ko:K01873 ko00970,map00970 M00359,M00360 R03665 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,Val_tRNA-synt_C,tRNA-synt_1 YYD2_k127_5203606_17 926569.ANT_01630 1.172e-22 104.0 2CMS6@1|root,339SN@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - DinB_2 YYD2_k127_5203606_6 1123401.JHYQ01000003_gene2157 2.081e-95 322.0 COG0730@1|root,COG0730@2|Bacteria,1MXNM@1224|Proteobacteria,1RTU6@1236|Gammaproteobacteria 1236|Gammaproteobacteria S membrane transporter protein - - - ko:K07090 - - - - ko00000 - - - TauE YYD2_k127_5203606_11 926569.ANT_02510 3.106e-81 283.0 COG1120@1|root,COG1120@2|Bacteria,2G6QS@200795|Chloroflexi 200795|Chloroflexi P PFAM ABC transporter related - - 3.6.3.34 ko:K02013 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.14 - - ABC_tran YYD2_k127_5203606_5 926569.ANT_02520 1.232e-118 391.0 COG0609@1|root,COG0609@2|Bacteria,2G6E8@200795|Chloroflexi 200795|Chloroflexi P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily - - - ko:K02015 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14 - - FecCD YYD2_k127_5203606_8 926569.ANT_02530 1.161e-87 299.0 COG0614@1|root,COG0614@2|Bacteria,2G6TS@200795|Chloroflexi 200795|Chloroflexi P periplasmic binding protein - - - ko:K02016 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14 - - Peripla_BP_2 YYD2_k127_5203606_10 649638.Trad_2634 1.852e-84 296.0 COG0702@1|root,COG0702@2|Bacteria,1WJH3@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus GM Protein of unknown function (DUF2867) - - - - - - - - - - - - DUF2867,NAD_binding_10,NmrA YYD2_k127_5203606_3 649638.Trad_2634 9.758e-147 483.0 COG0702@1|root,COG0702@2|Bacteria,1WJH3@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus GM Protein of unknown function (DUF2867) - - - - - - - - - - - - DUF2867,NAD_binding_10,NmrA YYD2_k127_5203606_7 926569.ANT_29650 2.867e-92 321.0 COG0658@1|root,COG0658@2|Bacteria,2G6G7@200795|Chloroflexi 200795|Chloroflexi S PFAM ComEC Rec2-related protein comEC - - ko:K02238 - M00429 - - ko00000,ko00002,ko02044 3.A.11.1,3.A.11.2 - - Competence,DUF4131,Lactamase_B YYD2_k127_5207857_3 292459.STH2305 1.409e-48 179.0 COG0563@1|root,COG0563@2|Bacteria 2|Bacteria F adenylate kinase activity adk - 2.7.4.3 ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 M00049 R00127,R01547,R11319 RC00002 ko00000,ko00001,ko00002,ko01000,ko04147 - - - AAA_33,ADK,ADK_lid,SKI YYD2_k127_5207857_0 1121918.ARWE01000001_gene385 8.395e-163 525.0 COG0161@1|root,COG0161@2|Bacteria,1MU2N@1224|Proteobacteria,42MFC@68525|delta/epsilon subdivisions,2WTRK@28221|Deltaproteobacteria 28221|Deltaproteobacteria E Aminotransferase class-III - - - - - - - - - - - - Aminotran_3 YYD2_k127_5207857_2 1540221.JQNI01000002_gene1637 6.37e-87 312.0 COG2199@1|root,COG3706@2|Bacteria,1WI95@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus T TIGRFAM diguanylate cyclase (GGDEF) domain - - - - - - - - - - - - CHASE3,GAF_3,GGDEF,HAMP,HisKA_7TM,PAS_4 YYD2_k127_5207857_1 525904.Tter_1226 3.218e-90 304.0 COG0492@1|root,COG0492@2|Bacteria,2NNS7@2323|unclassified Bacteria 2|Bacteria O Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family trxB GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 ko:K00384,ko:K03671 ko00450,ko04621,ko05418,map00450,map04621,map05418 - R02016,R03596,R09372 RC00013,RC02518,RC02873 ko00000,ko00001,ko01000,ko03110 - - iNJ661.Rv3913 Pyr_redox_2 YYD2_k127_5215073_1 1313172.YM304_01540 3.376e-69 240.0 COG1079@1|root,COG1079@2|Bacteria,2GKMB@201174|Actinobacteria 201174|Actinobacteria S Belongs to the binding-protein-dependent transport system permease family - - - ko:K02057 - M00221 - - ko00000,ko00002,ko02000 3.A.1.2 - - BPD_transp_2 YYD2_k127_5215073_0 1313172.YM304_01530 9.113e-109 361.0 COG1744@1|root,COG1744@2|Bacteria,2IEKS@201174|Actinobacteria 201174|Actinobacteria S ABC transporter substrate-binding protein PnrA-like - - - - - - - - - - - - Bmp YYD2_k127_5215073_2 373903.Hore_08780 1.944e-42 157.0 COG3845@1|root,COG3845@2|Bacteria,1UYQA@1239|Firmicutes,24XN8@186801|Clostridia,3WA8J@53433|Halanaerobiales 186801|Clostridia S PFAM ABC transporter yufO - 3.6.3.17 ko:K02056 - M00221 - - ko00000,ko00002,ko01000,ko02000 3.A.1.2 - - ABC_tran YYD2_k127_5219912_22 926550.CLDAP_38270 4.462e-09 68.0 COG2010@1|root,COG2010@2|Bacteria,2G741@200795|Chloroflexi 200795|Chloroflexi C Cytochrome c - - - - - - - - - - - - CarboxypepD_reg,Cytochrome_CBB3 YYD2_k127_5219912_20 644966.Tmar_0257 2.663e-10 72.0 COG1622@1|root,COG1622@2|Bacteria,1TPMD@1239|Firmicutes 1239|Firmicutes C COG1622 Heme copper-type cytochrome quinol oxidases, subunit 2 cbaB - 1.9.3.1 ko:K02275 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.2,3.D.4.4,3.D.4.6 - - COX2 YYD2_k127_5219912_4 653733.Selin_0567 3.044e-96 331.0 COG0348@1|root,COG1622@1|root,COG0348@2|Bacteria,COG1622@2|Bacteria 2|Bacteria C oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor vnfA - 1.9.3.1 ko:K02275 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.2,3.D.4.4,3.D.4.6 - - Cupredoxin_1,Fer4_5,Sigma54_activat,cNMP_binding YYD2_k127_5219912_16 653733.Selin_0567 7.061e-26 115.0 COG0348@1|root,COG1622@1|root,COG0348@2|Bacteria,COG1622@2|Bacteria 2|Bacteria C oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor vnfA - 1.9.3.1 ko:K02275 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.2,3.D.4.4,3.D.4.6 - - Cupredoxin_1,Fer4_5,Sigma54_activat,cNMP_binding YYD2_k127_5219912_17 867903.ThesuDRAFT_01405 5.336e-25 109.0 298S5@1|root,313VY@2|Bacteria,1U9KD@1239|Firmicutes,25702@186801|Clostridia 186801|Clostridia S Protein of unknown function with PCYCGC motif - - - - - - - - - - - - PCYCGC YYD2_k127_5219912_7 153948.NAL212_0227 1.822e-49 184.0 COG0500@1|root,COG2226@2|Bacteria,1PE85@1224|Proteobacteria,2W92M@28216|Betaproteobacteria,373FB@32003|Nitrosomonadales 28216|Betaproteobacteria Q Mycolic acid cyclopropane synthetase - - - - - - - - - - - - Methyltransf_25 YYD2_k127_5219912_0 472759.Nhal_2157 1.774e-280 880.0 COG2217@1|root,COG2217@2|Bacteria,1MU08@1224|Proteobacteria,1RN2C@1236|Gammaproteobacteria,1WVXM@135613|Chromatiales 135613|Chromatiales P heavy metal translocating P-type ATPase - - 3.6.3.4,3.6.3.54 ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 - R00086 RC00002 ko00000,ko00001,ko01000 3.A.3.5 - - E1-E2_ATPase,HMA,Hydrolase YYD2_k127_5219912_19 869210.Marky_1036 2.048e-13 71.0 COG3350@1|root,COG3350@2|Bacteria,1WN5Y@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S YHS domain - - - - - - - - - - - - YHS YYD2_k127_5219912_21 697281.Mahau_1389 4.574e-10 61.0 COG3350@1|root,COG3350@2|Bacteria,1VKZJ@1239|Firmicutes,24VQV@186801|Clostridia,42HIA@68295|Thermoanaerobacterales 186801|Clostridia S pfam yhs - - - - - - - - - - - - YHS YYD2_k127_5219912_14 644966.Tmar_1592 6.728e-29 130.0 COG0607@1|root,COG0607@2|Bacteria 2|Bacteria P Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - - - - - - - - - - DUF5069,Lactamase_B,Rhodanese YYD2_k127_5219912_12 1122218.KB893654_gene1893 2.422e-38 153.0 COG0785@1|root,COG0785@2|Bacteria,1RCP7@1224|Proteobacteria,2TSAI@28211|Alphaproteobacteria,1JVP8@119045|Methylobacteriaceae 28211|Alphaproteobacteria O Cytochrome C biogenesis protein transmembrane region ccdA - - ko:K06196 - - - - ko00000,ko02000 5.A.1.2 - - DsbD YYD2_k127_5219912_9 1128421.JAGA01000002_gene1307 1.116e-47 185.0 COG4585@1|root,COG4585@2|Bacteria 2|Bacteria T Histidine kinase - - 2.7.13.3 ko:K07777 ko02020,map02020 M00478 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - GAF,GAF_2,GAF_3,HATPase_c,HisKA_3,PAS,PAS_4,PAS_8 YYD2_k127_5219912_6 1128421.JAGA01000002_gene1308 9.131e-60 214.0 COG2197@1|root,COG2197@2|Bacteria,2NPMZ@2323|unclassified Bacteria 2|Bacteria T helix_turn_helix, Lux Regulon - - - - - - - - - - - - GerE,Response_reg YYD2_k127_5219912_8 926550.CLDAP_14450 1.163e-48 184.0 COG3815@1|root,COG3815@2|Bacteria 2|Bacteria S Predicted membrane protein (DUF2085) - - - - - - - - - - - - DUF2085 YYD2_k127_5219912_18 1173263.Syn7502_01511 8.024e-16 86.0 COG0515@1|root,COG0515@2|Bacteria,1GA6I@1117|Cyanobacteria 1117|Cyanobacteria KLT Protein of unknown function (DUF3105) - - - - - - - - - - - - DUF3105 YYD2_k127_5219912_23 1033802.SSPSH_001036 1.39e-05 52.0 COG0845@1|root,COG0845@2|Bacteria,1MVAS@1224|Proteobacteria,1RPBZ@1236|Gammaproteobacteria 1236|Gammaproteobacteria M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K07798,ko:K15727 ko02020,map02020 - - - ko00000,ko00001,ko02000 2.A.6.1.4,8.A.1,8.A.1.2.1 - - DUF3347,HlyD_D23,HlyD_D4,YtkA YYD2_k127_5219912_1 272134.KB731326_gene273 4.804e-106 355.0 COG2132@1|root,COG2132@2|Bacteria,1G3J9@1117|Cyanobacteria 1117|Cyanobacteria Q Multicopper oxidase - - - - - - - - - - - - Cu-oxidase,Cu-oxidase_2,Cu-oxidase_3 YYD2_k127_5219912_11 926556.Echvi_0501 9.105e-39 149.0 COG1051@1|root,COG1051@2|Bacteria,4P5C1@976|Bacteroidetes,47VT5@768503|Cytophagia 976|Bacteroidetes F NUDIX domain - - - ko:K12944 - - - - ko00000,ko01000 - - - NUDIX YYD2_k127_5219912_13 272560.BPSS0286 2.864e-32 136.0 COG0697@1|root,COG0697@2|Bacteria,1R46X@1224|Proteobacteria,2VNGN@28216|Betaproteobacteria,1K0ZX@119060|Burkholderiaceae 28216|Betaproteobacteria EG EamA-like transporter family - - - - - - - - - - - - EamA YYD2_k127_5219912_3 926550.CLDAP_25650 8.081e-102 339.0 COG2267@1|root,COG2267@2|Bacteria,2G6DZ@200795|Chloroflexi 200795|Chloroflexi I PFAM alpha beta hydrolase fold - - - - - - - - - - - - Abhydrolase_1 YYD2_k127_5219912_15 479434.Sthe_1772 1.136e-26 119.0 COG1028@1|root,COG1028@2|Bacteria,2G8JD@200795|Chloroflexi,27YCF@189775|Thermomicrobia 189775|Thermomicrobia IQ KR domain - - - - - - - - - - - - adh_short YYD2_k127_5219912_2 1192034.CAP_6745 4.769e-105 349.0 COG0807@1|root,COG0807@2|Bacteria,1MWZR@1224|Proteobacteria,42N2Q@68525|delta/epsilon subdivisions,2X9TY@28221|Deltaproteobacteria 28221|Deltaproteobacteria F Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate - - 3.5.4.25 ko:K01497 ko00740,ko00790,ko01100,ko01110,ko02024,map00740,map00790,map01100,map01110,map02024 M00125 R00425 RC00293,RC02504 ko00000,ko00001,ko00002,ko01000 - - - GTP_cyclohydro2 YYD2_k127_5219912_10 1094980.Mpsy_2065 6.06e-42 162.0 COG1985@1|root,arCOG01484@2157|Archaea,2XU47@28890|Euryarchaeota,2N96I@224756|Methanomicrobia 224756|Methanomicrobia H PFAM bifunctional deaminase-reductase domain protein - - 1.1.1.302 ko:K14654 ko00740,ko01100,map00740,map01100 - R09375,R09376 RC00933 ko00000,ko00001,ko01000 - - - RibD_C YYD2_k127_5219912_5 485917.Phep_4269 1.486e-88 299.0 COG3384@1|root,COG3384@2|Bacteria,4NFGT@976|Bacteroidetes,1IPF1@117747|Sphingobacteriia 976|Bacteroidetes S PFAM Catalytic LigB subunit of aromatic ring-opening dioxygenase - - - ko:K15777 ko00965,map00965 - R08836 RC00387 ko00000,ko00001,ko01000 - - - LigB YYD2_k127_5238192_4 667632.KB890183_gene966 0.0007647 44.0 COG2360@1|root,COG2360@2|Bacteria,1R9W8@1224|Proteobacteria,2VIUV@28216|Betaproteobacteria,1K04E@119060|Burkholderiaceae 28216|Betaproteobacteria O Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine aat - 2.3.2.6 ko:K00684 - - R03813,R11443,R11444 RC00055,RC00064 ko00000,ko01000 - - - Leu_Phe_trans YYD2_k127_5238192_2 477974.Daud_1728 3.831e-81 285.0 COG2202@1|root,COG2203@1|root,COG3437@1|root,COG3605@1|root,COG2202@2|Bacteria,COG2203@2|Bacteria,COG3437@2|Bacteria,COG3605@2|Bacteria,1UQJH@1239|Firmicutes,248UM@186801|Clostridia,261WQ@186807|Peptococcaceae 186801|Clostridia T HD domain - - - ko:K07814 - - - - ko00000,ko02022 - - - GAF_2,HD,HD_5 YYD2_k127_5238192_1 867845.KI911784_gene1685 2.951e-135 438.0 COG0167@1|root,COG0167@2|Bacteria,2G5T6@200795|Chloroflexi,3766V@32061|Chloroflexia 32061|Chloroflexia F Catalyzes the conversion of dihydroorotate to orotate - - 1.3.98.1 ko:K00226 ko00240,ko01100,map00240,map01100 M00051 R01867 RC00051 ko00000,ko00001,ko00002,ko01000 - - - DHO_dh YYD2_k127_5238192_0 926569.ANT_28320 0.0 1765.0 COG0674@1|root,COG1013@1|root,COG1014@1|root,COG1146@1|root,COG0674@2|Bacteria,COG1013@2|Bacteria,COG1014@2|Bacteria,COG1146@2|Bacteria,2G5M1@200795|Chloroflexi 200795|Chloroflexi C Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin porA - 1.2.7.1 ko:K00169,ko:K03737 ko00010,ko00020,ko00620,ko00633,ko00640,ko00650,ko00680,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00633,map00640,map00650,map00680,map00720,map01100,map01120,map01130,map01200 M00173,M00307,M00374,M00620 R01196,R01199,R08034,R10866 RC00004,RC00250,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - EKR,Fer4_16,Fer4_6,Fer4_7,PFOR_II,POR,POR_N,TPP_enzyme_C YYD2_k127_5238192_3 1122222.AXWR01000043_gene2580 4.878e-10 64.0 2DUZD@1|root,33T56@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - YYD2_k127_5262048_0 926569.ANT_25050 3.839e-238 741.0 COG0443@1|root,COG0443@2|Bacteria,2G5U5@200795|Chloroflexi 200795|Chloroflexi O Heat shock 70 kDa protein dnaK - - ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 - - - ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 1.A.33.1 - - HSP70 YYD2_k127_5262048_3 926569.ANT_25060 1.128e-39 153.0 COG0576@1|root,COG0576@2|Bacteria,2G77I@200795|Chloroflexi 200795|Chloroflexi O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ grpE - - ko:K03687 - - - - ko00000,ko03029,ko03110 - - - GrpE YYD2_k127_5262048_1 926569.ANT_25070 9.344e-139 449.0 COG1420@1|root,COG1420@2|Bacteria,2G6AQ@200795|Chloroflexi 200795|Chloroflexi K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons hrcA - - ko:K03705 - - - - ko00000,ko03000 - - - HrcA YYD2_k127_5262048_2 926569.ANT_22580 1.78e-118 401.0 COG0515@1|root,COG0823@1|root,COG0515@2|Bacteria,COG0823@2|Bacteria,2G8F8@200795|Chloroflexi 200795|Chloroflexi KLTU Protein tyrosine kinase - - - - - - - - - - - - PD40,Pkinase YYD2_k127_5262746_1 311424.DhcVS_979 1.704e-139 460.0 COG0210@1|root,COG0210@2|Bacteria,2G5XF@200795|Chloroflexi,34D7Z@301297|Dehalococcoidia 301297|Dehalococcoidia L UvrD/REP helicase N-terminal domain pcrA - 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - UvrD-helicase,UvrD_C YYD2_k127_5262746_0 926569.ANT_03160 4.231e-176 570.0 COG1164@1|root,COG1164@2|Bacteria,2G5SV@200795|Chloroflexi 200795|Chloroflexi E PFAM peptidase M3A and M3B, thimet oligopeptidase F - - - ko:K08602 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M3 YYD2_k127_5262746_2 926569.ANT_03150 2.364e-111 370.0 COG1208@1|root,COG1208@2|Bacteria,2G5KH@200795|Chloroflexi 200795|Chloroflexi M PFAM Nucleotidyl transferase - - 2.7.7.24 ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 M00793 R02328 RC00002 ko00000,ko00001,ko00002,ko01000 - - - NTP_transferase YYD2_k127_5262746_3 1128421.JAGA01000002_gene1310 6.846e-70 241.0 COG0436@1|root,COG0436@2|Bacteria,2NP1C@2323|unclassified Bacteria 2|Bacteria E Aminotransferase yugH - 2.6.1.1 ko:K00812,ko:K10907 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 - R00355,R00694,R00734,R00896,R02433,R02619,R05052 RC00006 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 YYD2_k127_5264090_10 316274.Haur_0717 2.715e-42 162.0 COG0515@1|root,COG1262@1|root,COG0515@2|Bacteria,COG1262@2|Bacteria,2G5NM@200795|Chloroflexi,3755B@32061|Chloroflexia 200795|Chloroflexi KLT Serine threonine protein kinase - - - - - - - - - - - - Pkinase YYD2_k127_5264090_3 485913.Krac_4710 3.058e-111 372.0 COG0477@1|root,COG2814@2|Bacteria,2G7RU@200795|Chloroflexi 200795|Chloroflexi EGP PFAM major facilitator superfamily MFS_1 - - - - - - - - - - - - MFS_3 YYD2_k127_5264090_13 748727.CLJU_c40320 0.0005396 50.0 29PH6@1|root,30AFB@2|Bacteria,1W26W@1239|Firmicutes,249DA@186801|Clostridia,36GEV@31979|Clostridiaceae 186801|Clostridia S YtkA-like - - - - - - - - - - - - YtkA YYD2_k127_5264090_1 868595.Desca_2404 9.04e-206 648.0 COG0348@1|root,COG0348@2|Bacteria,1U9JQ@1239|Firmicutes,24ADI@186801|Clostridia,26078@186807|Peptococcaceae 186801|Clostridia C 4Fe-4S binding domain - - - - - - - - - - - - Fer4,Fer4_5 YYD2_k127_5264090_9 1380356.JNIK01000001_gene2209 7.622e-45 181.0 COG1307@1|root,COG1307@2|Bacteria,2GIUV@201174|Actinobacteria,4ESRV@85013|Frankiales 201174|Actinobacteria S Uncharacterised protein, DegV family COG1307 - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - - - - - - - - - - DegV YYD2_k127_5264090_6 926569.ANT_31280 2.09e-51 190.0 COG4087@1|root,COG4087@2|Bacteria,2G99M@200795|Chloroflexi 200795|Chloroflexi S Haloacid dehalogenase domain protein hydrolase - - - - - - - - - - - - Hydrolase_3 YYD2_k127_5264090_7 926569.ANT_31270 2.125e-48 190.0 COG1808@1|root,COG1808@2|Bacteria 2|Bacteria S Domain of unknown function (DUF389) - - - - - - - - - - - - DUF389 YYD2_k127_5264090_0 926569.ANT_31260 8.292e-239 746.0 COG1109@1|root,COG1109@2|Bacteria,2G5PR@200795|Chloroflexi 200795|Chloroflexi G Phosphoglucomutase/phosphomannomutase, C-terminal domain - - - - - - - - - - - - PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV YYD2_k127_5264090_2 926569.ANT_06410 1e-183 586.0 COG1887@1|root,COG1887@2|Bacteria 2|Bacteria M Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - - - - - - - - - - Glyphos_transf YYD2_k127_5264090_12 1197906.CAJQ02000034_gene2807 9.227e-21 93.0 COG3360@1|root,COG3360@2|Bacteria,1N6YT@1224|Proteobacteria,2UFPQ@28211|Alphaproteobacteria 28211|Alphaproteobacteria S Dodecin - - - ko:K09165 - - - - ko00000 - - - Dodecin YYD2_k127_5264090_11 871968.DESME_08490 6.326e-29 122.0 arCOG06631@1|root,32RY6@2|Bacteria,1V8RP@1239|Firmicutes,24MV5@186801|Clostridia,264X8@186807|Peptococcaceae 186801|Clostridia S EamA-like transporter family - - - - - - - - - - - - EamA YYD2_k127_5264090_4 63737.Npun_F1222 3.001e-103 360.0 COG1672@1|root,COG2319@1|root,COG1672@2|Bacteria,COG2319@2|Bacteria,1FZVW@1117|Cyanobacteria,1HINJ@1161|Nostocales 1117|Cyanobacteria L PFAM WD domain, G-beta repeat - - - - - - - - - - - - Peptidase_C14,WD40 YYD2_k127_5264090_8 266117.Rxyl_3108 1.234e-47 185.0 COG4714@1|root,COG4714@2|Bacteria 2|Bacteria EGP membrane-anchored protein conserved in bacteria - - - - - - - - - - - - Sulfotransfer_3 YYD2_k127_5264090_5 926569.ANT_06420 1.546e-79 268.0 COG0673@1|root,COG0673@2|Bacteria 2|Bacteria S inositol 2-dehydrogenase activity ptmF - 2.7.7.82 ko:K18431 ko00520,map00520 - R10182 RC00152 ko00000,ko00001,ko01000 - - - GFO_IDH_MocA,GFO_IDH_MocA_C YYD2_k127_5275963_1 357808.RoseRS_1121 4.523e-48 176.0 COG2141@1|root,COG2141@2|Bacteria,2G5MF@200795|Chloroflexi,376CU@32061|Chloroflexia 32061|Chloroflexia C PFAM luciferase family protein - - - - - - - - - - - - Bac_luciferase YYD2_k127_5275963_2 926569.ANT_07030 6.22e-47 172.0 COG0824@1|root,COG0824@2|Bacteria,2G7HH@200795|Chloroflexi 200795|Chloroflexi S PFAM thioesterase superfamily protein - - - ko:K07107 - - - - ko00000,ko01000 - - - 4HBT_2 YYD2_k127_5275963_4 1123008.KB905700_gene2140 7.906e-18 97.0 COG3292@1|root,COG3292@2|Bacteria,4NI2T@976|Bacteroidetes,2FV1K@200643|Bacteroidia,22Z9F@171551|Porphyromonadaceae 976|Bacteroidetes T Two component regulator propeller - - - - - - - - - - - - Reg_prop,YceI YYD2_k127_5275963_3 661478.OP10G_0003 3.452e-26 121.0 COG1402@1|root,COG1402@2|Bacteria 2|Bacteria I creatininase - - 3.5.2.10 ko:K01470 ko00330,map00330 - R01884 RC00615 ko00000,ko00001,ko01000 - - - Creatininase YYD2_k127_5275963_0 401053.AciPR4_2252 2.602e-69 257.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,3Y3XQ@57723|Acidobacteria 57723|Acidobacteria E Dienelactone hydrolase family - - - - - - - - - - - - Peptidase_S9 YYD2_k127_5283390_0 926569.ANT_19910 1.117e-122 401.0 COG3407@1|root,COG3407@2|Bacteria,2G5SQ@200795|Chloroflexi 200795|Chloroflexi I GHMP kinases N terminal domain mvaD - 4.1.1.33 ko:K01597 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00095 R01121 RC00453 ko00000,ko00001,ko00002,ko01000 - - - GHMP_kinases_N YYD2_k127_5314368_0 357808.RoseRS_2859 1.103e-123 406.0 COG4948@1|root,COG4948@2|Bacteria,2G704@200795|Chloroflexi,3771P@32061|Chloroflexia 32061|Chloroflexia H Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) menC - 4.2.1.113 ko:K02549 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R04031 RC01053 ko00000,ko00001,ko00002,ko01000 - - - MR_MLE_C,MR_MLE_N YYD2_k127_5314368_1 926569.ANT_14000 5.3e-64 223.0 COG1933@1|root,COG1933@2|Bacteria 2|Bacteria L exodeoxyribonuclease I activity - - - - - - - - - - - - Band_7_1,DZR,PLDc_N,zf-ribbon_3,zinc_ribbon_2 YYD2_k127_5314368_2 926569.ANT_23510 2.027e-37 153.0 COG1470@1|root,COG1470@2|Bacteria,2G6XR@200795|Chloroflexi 200795|Chloroflexi S Protein of unknown function (DUF3048) C-terminal domain - - - - - - - - - - - - DUF3048,DUF3048_C YYD2_k127_5344937_5 1449076.JOOE01000003_gene3389 7.342e-10 67.0 COG1329@1|root,COG1329@2|Bacteria,1MWI2@1224|Proteobacteria,2TTVP@28211|Alphaproteobacteria,2K0TA@204457|Sphingomonadales 204457|Sphingomonadales K CarD family transcriptional regulator - - - ko:K07736 - - - - ko00000,ko03000 - - - CarD_CdnL_TRCF YYD2_k127_5344937_4 497964.CfE428DRAFT_6673 2.181e-24 105.0 COG0724@1|root,COG0724@2|Bacteria,46VMU@74201|Verrucomicrobia 74201|Verrucomicrobia S PFAM RNP-1 like RNA-binding protein - - - - - - - - - - - - RRM_1 YYD2_k127_5344937_3 926569.ANT_28940 1.865e-52 198.0 COG2382@1|root,COG2382@2|Bacteria 2|Bacteria P enterobactin catabolic process - - - ko:K07214 - - - - ko00000 - - - Esterase YYD2_k127_5344937_0 1521187.JPIM01000082_gene188 2.076e-117 387.0 COG1087@1|root,COG1087@2|Bacteria,2G5QM@200795|Chloroflexi,3754S@32061|Chloroflexia 32061|Chloroflexia M Belongs to the NAD(P)-dependent epimerase dehydratase family - - 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 - - - Epimerase YYD2_k127_5344937_2 1173027.Mic7113_0692 1.759e-63 224.0 COG0457@1|root,COG1994@1|root,COG0457@2|Bacteria,COG1994@2|Bacteria,1G1EH@1117|Cyanobacteria,1HAWT@1150|Oscillatoriales 1117|Cyanobacteria S Peptidase family M50 - - - - - - - - - - - - TPR_1,TPR_2,TPR_8 YYD2_k127_5344937_1 1122947.FR7_0942 2.659e-109 364.0 COG1252@1|root,COG1252@2|Bacteria,1TR6X@1239|Firmicutes,4H3UJ@909932|Negativicutes 909932|Negativicutes C pyridine nucleotide-disulfide oxidoreductase - - 1.6.99.3 ko:K03885 ko00190,map00190 - - - ko00000,ko00001,ko01000 - - - Pyr_redox_2 YYD2_k127_535651_1 926569.ANT_06320 2.422e-122 401.0 COG0763@1|root,COG0763@2|Bacteria 2|Bacteria M lipid-A-disaccharide synthase activity - - 2.4.1.182 ko:K00748 ko00540,ko01100,map00540,map01100 M00060 R04606 RC00005,RC00059 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT19 - Capsule_synth YYD2_k127_535651_2 926569.ANT_06330 9.031e-93 329.0 COG0500@1|root,COG2226@2|Bacteria 2|Bacteria Q methyltransferase - - - - - - - - - - - - Methyltransf_11,Methyltransf_25 YYD2_k127_535651_3 313612.L8106_07606 2.157e-80 292.0 COG0500@1|root,COG2226@2|Bacteria,1G2V9@1117|Cyanobacteria 1117|Cyanobacteria Q PFAM sulfotransferase - - - - - - - - - - - - Sulfotransfer_1 YYD2_k127_535651_4 1230342.CTM_02789 5.16e-62 223.0 COG0500@1|root,COG0789@1|root,COG0789@2|Bacteria,COG2226@2|Bacteria,1TSDZ@1239|Firmicutes,248EY@186801|Clostridia,36EQV@31979|Clostridiaceae 186801|Clostridia KQ helix_turn_helix, mercury resistance - - - - - - - - - - - - MerR_1,Methyltransf_11,Methyltransf_25,Methyltransf_31 YYD2_k127_535651_0 926569.ANT_06340 1.276e-128 415.0 COG1086@1|root,COG1086@2|Bacteria,2G8BP@200795|Chloroflexi 200795|Chloroflexi M NmrA-like family - - - - - - - - - - - - Polysacc_synt_2 YYD2_k127_5356965_2 926569.ANT_04530 8.037e-71 240.0 COG0542@1|root,COG0542@2|Bacteria,2G5RA@200795|Chloroflexi 200795|Chloroflexi O ATPase AAA-2 domain protein clpC - - ko:K03696 ko01100,map01100 - - - ko00000,ko03110 - - - AAA,AAA_2,ClpB_D2-small,Clp_N,HTH_17,UVR YYD2_k127_5356965_3 926569.ANT_04530 1.441e-39 151.0 COG0542@1|root,COG0542@2|Bacteria,2G5RA@200795|Chloroflexi 200795|Chloroflexi O ATPase AAA-2 domain protein clpC - - ko:K03696 ko01100,map01100 - - - ko00000,ko03110 - - - AAA,AAA_2,ClpB_D2-small,Clp_N,HTH_17,UVR YYD2_k127_5356965_1 926550.CLDAP_32000 1.887e-81 275.0 COG0225@1|root,COG0225@2|Bacteria,2G6JK@200795|Chloroflexi 200795|Chloroflexi C Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine msrA - 1.8.4.11 ko:K07304 - - - - ko00000,ko01000 - - - PMSR YYD2_k127_5356965_4 1450694.BTS2_1383 0.0001533 51.0 COG2318@1|root,COG2318@2|Bacteria,1VAGC@1239|Firmicutes,4HMA9@91061|Bacilli,1ZFRM@1386|Bacillus 91061|Bacilli S DinB superfamily - - - - - - - - - - - - DinB_2 YYD2_k127_5356965_0 247490.KSU1_C1426 1.29e-98 331.0 COG0042@1|root,COG0042@2|Bacteria,2IYI5@203682|Planctomycetes 203682|Planctomycetes H Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - - - - - - - - - - Dus YYD2_k127_53591_0 580331.Thit_0198 4.769e-125 410.0 COG1472@1|root,COG1472@2|Bacteria,1TP0T@1239|Firmicutes,24932@186801|Clostridia,42FMZ@68295|Thermoanaerobacterales 186801|Clostridia G PFAM glycoside hydrolase, family 3 domain protein - - 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - GH3 - Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C YYD2_k127_53591_1 935948.KE386495_gene1928 9.491e-68 240.0 COG4223@1|root,COG4223@2|Bacteria,1TSFB@1239|Firmicutes,24BRS@186801|Clostridia,42FM0@68295|Thermoanaerobacterales 186801|Clostridia S Domain of unknown function (DUF4380) - - - - - - - - - - - - - YYD2_k127_53591_2 926550.CLDAP_00290 4.218e-20 91.0 COG1070@1|root,COG1070@2|Bacteria,2G5QX@200795|Chloroflexi 200795|Chloroflexi G PFAM carbohydrate kinase xylB - 2.7.1.17 ko:K00854 ko00040,ko01100,map00040,map01100 M00014 R01639 RC00002,RC00538 ko00000,ko00001,ko00002,ko01000 - - - FGGY_C,FGGY_N YYD2_k127_5361374_5 926569.ANT_15720 7.701e-22 96.0 COG0535@1|root,COG0535@2|Bacteria,2G5XT@200795|Chloroflexi 200795|Chloroflexi C PFAM Radical SAM domain protein - - - ko:K22227 - - - - ko00000 - - - Fer4_12,Fer4_14,Radical_SAM,SPASM YYD2_k127_5361374_1 1511.CLOST_0432 2.286e-69 249.0 COG2234@1|root,COG2234@2|Bacteria,1UHWN@1239|Firmicutes,25E5J@186801|Clostridia 186801|Clostridia S Peptidase family M28 - - - - - - - - - - - - Peptidase_M28 YYD2_k127_5361374_4 555079.Toce_0227 4.264e-39 149.0 COG3829@1|root,COG3829@2|Bacteria,1VBSS@1239|Firmicutes 1239|Firmicutes KT transcription factor binding - - - - - - - - - - - - - YYD2_k127_5361374_0 926569.ANT_15730 1.019e-87 303.0 COG0535@1|root,COG0535@2|Bacteria 2|Bacteria I radical SAM domain protein - - - - - - - - - - - - Fer4_12,Fer4_14,Radical_SAM,SPASM YYD2_k127_5361374_2 208596.CAR_c06000 2.525e-43 171.0 2CH8Y@1|root,32S5K@2|Bacteria,1VDN2@1239|Firmicutes,4HMAK@91061|Bacilli 91061|Bacilli - - - - - - - - - - - - - - - YYD2_k127_5361374_3 237368.SCABRO_03062 1.284e-39 154.0 COG0500@1|root,COG2226@2|Bacteria 2|Bacteria Q methyltransferase - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1,Methyltransf_11,Methyltransf_23,Methyltransf_25,Methyltransf_31 YYD2_k127_5361374_6 1121405.dsmv_1907 5.386e-11 65.0 COG1397@1|root,COG2365@1|root,COG1397@2|Bacteria,COG2365@2|Bacteria,1NTUR@1224|Proteobacteria,42NWG@68525|delta/epsilon subdivisions,2WJYQ@28221|Deltaproteobacteria,2MJ49@213118|Desulfobacterales 28221|Deltaproteobacteria O ADP-ribosylglycohydrolase - - 3.2.2.24 ko:K05521 - - - - ko00000,ko01000 - - - ADP_ribosyl_GH YYD2_k127_5374874_1 926569.ANT_18450 9.125e-38 145.0 COG0325@1|root,COG0325@2|Bacteria,2G6F1@200795|Chloroflexi 200795|Chloroflexi S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis - - - ko:K06997 - - - - ko00000 - - - Ala_racemase_N YYD2_k127_5374874_3 1304888.ATWF01000001_gene735 7.611e-06 51.0 COG0762@1|root,COG0762@2|Bacteria,2GFIV@200930|Deferribacteres 200930|Deferribacteres S YGGT family - - - ko:K02221 - - - - ko00000,ko02044 - - - YGGT YYD2_k127_5374874_2 926569.ANT_18430 1.195e-31 126.0 COG1872@1|root,COG1872@2|Bacteria,2G7H4@200795|Chloroflexi 200795|Chloroflexi S Belongs to the UPF0235 family - - - ko:K09131 - - - - ko00000 - - - DUF167 YYD2_k127_5374874_0 926569.ANT_14290 1.666e-146 488.0 COG0457@1|root,COG0741@1|root,COG0457@2|Bacteria,COG0741@2|Bacteria,2G6NM@200795|Chloroflexi 200795|Chloroflexi M Lytic transglycosylase catalytic - - - ko:K08309 - - - - ko00000,ko01000,ko01011 - GH23 - SLT,TPR_16,TPR_6 YYD2_k127_5419205_1 926569.ANT_00990 5.155e-05 48.0 COG1215@1|root,COG1215@2|Bacteria,2GA7S@200795|Chloroflexi 200795|Chloroflexi M PFAM Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 YYD2_k127_5419205_2 1463881.KL591006_gene2378 0.0004815 49.0 COG3832@1|root,COG3832@2|Bacteria,2IN0A@201174|Actinobacteria 201174|Actinobacteria S Polyketide cyclase / dehydrase and lipid transport - - - - - - - - - - - - Polyketide_cyc2 YYD2_k127_5422552_1 311424.DhcVS_1445 2.097e-81 280.0 2A40N@1|root,30SJ6@2|Bacteria,2G9WM@200795|Chloroflexi,34DKR@301297|Dehalococcoidia 301297|Dehalococcoidia - - - - - - - - - - - - - - - YYD2_k127_5422552_0 1123400.KB904767_gene3417 1.792e-104 348.0 COG0053@1|root,COG0053@2|Bacteria,1MUDS@1224|Proteobacteria,1S1GA@1236|Gammaproteobacteria 1236|Gammaproteobacteria P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - - - - - - - - - - Cation_efflux,ZT_dimer YYD2_k127_5422552_2 926569.ANT_30550 8.228e-78 267.0 COG0566@1|root,COG0566@2|Bacteria,2G6FR@200795|Chloroflexi 200795|Chloroflexi J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family - - 2.1.1.185 ko:K03218 - - - - ko00000,ko01000,ko03009 - - - SpoU_methylase,SpoU_sub_bind YYD2_k127_5422552_3 926569.ANT_05370 1.757e-38 145.0 COG2723@1|root,COG2723@2|Bacteria,2G5QE@200795|Chloroflexi 200795|Chloroflexi G PFAM glycoside hydrolase, family 1 - - 3.2.1.21 ko:K05350 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - - - Glyco_hydro_1 YYD2_k127_5434218_1 1382306.JNIM01000001_gene2044 1.762e-110 379.0 COG0642@1|root,COG4191@1|root,COG2205@2|Bacteria,COG4191@2|Bacteria,2G7JR@200795|Chloroflexi 200795|Chloroflexi T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HisKA,PAS_4 YYD2_k127_5434218_2 316274.Haur_2262 1.234e-75 259.0 COG0745@1|root,COG0745@2|Bacteria,2G81R@200795|Chloroflexi 200795|Chloroflexi K Two component transcriptional regulator, winged helix family - - - - - - - - - - - - Response_reg,Trans_reg_C YYD2_k127_5434218_0 1254432.SCE1572_20250 2.889e-125 415.0 COG0559@1|root,COG0683@1|root,COG0559@2|Bacteria,COG0683@2|Bacteria,1N5XH@1224|Proteobacteria,42PN7@68525|delta/epsilon subdivisions,2WIRP@28221|Deltaproteobacteria,2Z0ZI@29|Myxococcales 28221|Deltaproteobacteria U Belongs to the binding-protein-dependent transport system permease family - - - ko:K01997,ko:K01999 ko02010,ko02024,map02010,map02024 M00237 - - ko00000,ko00001,ko00002,ko02000 3.A.1.4 - - BPD_transp_2 YYD2_k127_5457131_2 926550.CLDAP_24330 6.797e-87 295.0 COG4122@1|root,COG4122@2|Bacteria 2|Bacteria E O-methyltransferase activity - - 2.1.1.6 ko:K00545 ko00140,ko00350,ko00965,ko01100,ko04728,map00140,map00350,map00965,map01100,map04728 - R02534,R02920,R03304,R04301,R04762,R04764,R04881,R04887 RC00003,RC00392 ko00000,ko00001,ko01000,ko04147 - - - Methyltransf_3 YYD2_k127_5457131_0 926569.ANT_10870 3.356e-280 885.0 COG0188@1|root,COG0188@2|Bacteria,2G5Q2@200795|Chloroflexi 200795|Chloroflexi L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner gyrA - 5.99.1.3 ko:K02469 - - - - ko00000,ko01000,ko03032,ko03400 - - - DNA_gyraseA_C,DNA_topoisoIV YYD2_k127_5457131_9 926560.KE387023_gene1192 2.14e-45 170.0 COG0454@1|root,COG0456@2|Bacteria,1WMRU@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus K FR47-like protein - - - - - - - - - - - - - YYD2_k127_5457131_12 195250.CM001776_gene3721 4.545e-13 73.0 2EJ72@1|root,33CY7@2|Bacteria,1GB8K@1117|Cyanobacteria 1117|Cyanobacteria - - - - - - - - - - - - - - - YYD2_k127_5457131_5 1121382.JQKG01000054_gene2128 9.451e-65 226.0 COG4675@1|root,COG4675@2|Bacteria,1WMKD@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus S Phage Tail Collar Domain - - - - - - - - - - - - Collar YYD2_k127_5457131_6 469383.Cwoe_1293 1.773e-63 222.0 COG4675@1|root,COG4675@2|Bacteria,2HR4R@201174|Actinobacteria,4CT05@84995|Rubrobacteria 2|Bacteria S Phage Tail Collar Domain - - - - - - - - - - - - Collar YYD2_k127_5457131_4 1123276.KB893267_gene5105 3.888e-65 226.0 COG4675@1|root,COG4675@2|Bacteria,4NQJR@976|Bacteroidetes,47Q8Q@768503|Cytophagia 976|Bacteroidetes S Phage Tail Collar Domain - - - - - - - - - - - - Collar YYD2_k127_5457131_7 1123276.KB893267_gene5108 2.793e-53 217.0 COG2374@1|root,COG3210@1|root,COG4733@1|root,COG4886@1|root,COG2374@2|Bacteria,COG3210@2|Bacteria,COG4733@2|Bacteria,COG4886@2|Bacteria,4PPRP@976|Bacteroidetes 976|Bacteroidetes U Parallel beta-helix repeats - - - - - - - - - - - - - YYD2_k127_5457131_10 195250.CM001776_gene3714 7.372e-19 104.0 COG3210@1|root,COG4886@1|root,COG3210@2|Bacteria,COG4886@2|Bacteria,1G4YY@1117|Cyanobacteria 1117|Cyanobacteria U Parallel beta-helix repeats - - - - - - - - - - - - Beta_helix,IAT_beta YYD2_k127_5457131_3 1297742.A176_00262 8.618e-77 295.0 COG1470@1|root,COG2885@1|root,COG4719@1|root,COG1470@2|Bacteria,COG2885@2|Bacteria,COG4719@2|Bacteria,1MX1F@1224|Proteobacteria,42UTB@68525|delta/epsilon subdivisions,2WQUW@28221|Deltaproteobacteria,2YUE1@29|Myxococcales 28221|Deltaproteobacteria M Belongs to the ompA family - - - ko:K20276 ko02024,map02024 - - - ko00000,ko00001 - - - Big_3_2,DUF11,OmpA,Phenol_MetA_deg,TSP_3 YYD2_k127_5457131_11 1117647.M5M_00005 2.532e-14 89.0 COG2304@1|root,COG2931@1|root,COG2304@2|Bacteria,COG2931@2|Bacteria,1MU7T@1224|Proteobacteria,1S0EK@1236|Gammaproteobacteria,1JBUD@118884|unclassified Gammaproteobacteria 1236|Gammaproteobacteria Q COG2931 RTX toxins and related Ca2 -binding proteins - - - - - - - - - - - - Calx-beta,HemolysinCabind,Peptidase_M10,Peptidase_M10_C,VWA_2 YYD2_k127_5457131_1 926569.ANT_10920 6.054e-87 300.0 COG0095@1|root,COG0095@2|Bacteria,2G6P9@200795|Chloroflexi 200795|Chloroflexi H PFAM Biotin lipoate A B protein ligase - - 6.3.1.20 ko:K03800 ko00785,ko01100,map00785,map01100 - R07770,R07771,R11143 RC00043,RC00070,RC00090,RC00992,RC02896 ko00000,ko00001,ko01000 - - - BPL_LplA_LipB YYD2_k127_5457131_8 443598.AUFA01000021_gene2982 2.574e-48 183.0 COG0329@1|root,COG0329@2|Bacteria,1MXM5@1224|Proteobacteria,2TUAG@28211|Alphaproteobacteria,3JUI2@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria EM Dihydrodipicolinate synthetase family dapAb - 4.3.3.7 ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R10147 RC03062,RC03063 ko00000,ko00001,ko00002,ko01000 - - - DHDPS YYD2_k127_5463137_1 1343739.PAP_08680 1.448e-37 154.0 arCOG11292@1|root,arCOG11292@2157|Archaea,2Y3FT@28890|Euryarchaeota,2443S@183968|Thermococci 183968|Thermococci - - - - - - - - - - - - - - - YYD2_k127_5463137_0 1128421.JAGA01000003_gene3367 2.632e-107 368.0 COG1139@1|root,COG1139@2|Bacteria,2NQQF@2323|unclassified Bacteria 2|Bacteria C LUD domain lutB - - ko:K18929 - - - - ko00000 - - iSF_1195.SF0259,iSFxv_1172.SFxv_0274,iS_1188.S0280 DUF3390,Fer4_8,LUD_dom YYD2_k127_5471540_5 172045.KS04_09025 2.863e-28 115.0 COG3384@1|root,COG3384@2|Bacteria,4NFGT@976|Bacteroidetes,1HX1P@117743|Flavobacteriia,34QW6@308865|Elizabethkingia 976|Bacteroidetes S Catalytic LigB subunit of aromatic ring-opening dioxygenase - - - ko:K15777 ko00965,map00965 - R08836 RC00387 ko00000,ko00001,ko01000 - - - LigB YYD2_k127_5471540_4 1267535.KB906767_gene3711 2.609e-30 124.0 COG1959@1|root,COG1959@2|Bacteria 2|Bacteria K 2 iron, 2 sulfur cluster binding - - - - - - - - - - - - Rrf2 YYD2_k127_5471540_2 926569.ANT_26640 4.023e-99 344.0 COG0308@1|root,COG0308@2|Bacteria,2G75V@200795|Chloroflexi 200795|Chloroflexi E PFAM peptidase M1, membrane alanine aminopeptidase - - - - - - - - - - - - Peptidase_M1 YYD2_k127_5471540_1 926569.ANT_26640 4.944e-101 347.0 COG0308@1|root,COG0308@2|Bacteria,2G75V@200795|Chloroflexi 200795|Chloroflexi E PFAM peptidase M1, membrane alanine aminopeptidase - - - - - - - - - - - - Peptidase_M1 YYD2_k127_5471540_0 926569.ANT_20980 1.163e-109 362.0 COG1108@1|root,COG1108@2|Bacteria,2G6GH@200795|Chloroflexi 200795|Chloroflexi P PFAM ABC-3 protein - - - ko:K09816,ko:K09819 ko02010,map02010 M00242,M00243 - - ko00000,ko00001,ko00002,ko02000 3.A.1.15,3.A.1.15.3,3.A.1.15.5 - - ABC-3 YYD2_k127_5471540_3 867845.KI911784_gene1824 1.301e-73 256.0 COG1121@1|root,COG1121@2|Bacteria,2G5WQ@200795|Chloroflexi,374U1@32061|Chloroflexia 32061|Chloroflexia P PFAM ABC transporter related - - - - - - - - - - - - ABC_tran YYD2_k127_548410_2 869210.Marky_1927 3.143e-114 376.0 COG0076@1|root,COG0076@2|Bacteria,1WKXN@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus E COG0076 Glutamate decarboxylase and related PLP-dependent - - 4.1.1.105,4.1.1.28 ko:K01593 ko00350,ko00360,ko00380,ko00901,ko00950,ko00965,ko01100,ko01110,ko04726,ko04728,ko05030,ko05031,ko05034,map00350,map00360,map00380,map00901,map00950,map00965,map01100,map01110,map04726,map04728,map05030,map05031,map05034 M00037,M00042 R00685,R00699,R00736,R02080,R02701,R04909 RC00299 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Pyridoxal_deC YYD2_k127_548410_3 926569.ANT_28790 2.394e-63 219.0 COG1545@1|root,COG1545@2|Bacteria,2G73Z@200795|Chloroflexi 200795|Chloroflexi S DUF35 OB-fold domain, acyl-CoA-associated - - - ko:K07068 - - - - ko00000 - - - DUF35_N,OB_aCoA_assoc YYD2_k127_548410_1 926569.ANT_28800 1.136e-138 451.0 COG0183@1|root,COG0183@2|Bacteria,2G63J@200795|Chloroflexi 200795|Chloroflexi I Belongs to the thiolase family - - 2.3.1.9 ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 M00088,M00095,M00373,M00374,M00375 R00238,R01177 RC00004,RC00326 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Thiolase_C,Thiolase_N YYD2_k127_548410_0 926569.ANT_28810 2.925e-164 524.0 COG3425@1|root,COG3425@2|Bacteria,2G606@200795|Chloroflexi 200795|Chloroflexi I 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III domain protein - - 2.3.3.10 ko:K01641 ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130 M00088,M00095 R01978 RC00004,RC00503 ko00000,ko00001,ko00002,ko01000 - - - ACP_syn_III_C YYD2_k127_5487772_1 926569.ANT_15320 4.634e-118 391.0 COG0285@1|root,COG0285@2|Bacteria,2G64M@200795|Chloroflexi 200795|Chloroflexi H PFAM cytoplasmic peptidoglycan synthetase domain protein folC - 6.3.2.12,6.3.2.17 ko:K11754 ko00790,ko01100,map00790,map01100 M00126,M00841 R00942,R02237,R04241 RC00064,RC00090,RC00162 ko00000,ko00001,ko00002,ko01000 - - - Mur_ligase_C,Mur_ligase_M YYD2_k127_5487772_0 357808.RoseRS_1605 7.889e-240 760.0 COG0466@1|root,COG0466@2|Bacteria,2G5TZ@200795|Chloroflexi,374Z8@32061|Chloroflexia 32061|Chloroflexia O ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner - - 3.4.21.53 ko:K01338 ko04112,map04112 - - - ko00000,ko00001,ko01000,ko01002 - - - AAA,LON_substr_bdg,Lon_C YYD2_k127_5492426_3 580331.Thit_1006 3.311e-10 63.0 COG2255@1|root,COG2255@2|Bacteria,1TR47@1239|Firmicutes,247W0@186801|Clostridia,42F5U@68295|Thermoanaerobacterales 186801|Clostridia L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing ruvB - 3.6.4.12 ko:K03551 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - RuvB_C,RuvB_N YYD2_k127_5492426_0 926569.ANT_19870 1.119e-156 500.0 COG2255@1|root,COG2255@2|Bacteria,2G5QQ@200795|Chloroflexi 200795|Chloroflexi L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing ruvB - 3.6.4.12 ko:K03551 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - RuvB_C,RuvB_N YYD2_k127_5492426_2 592015.HMPREF1705_01077 1.616e-13 72.0 2BKSG@1|root,32F8J@2|Bacteria,3TBT7@508458|Synergistetes 508458|Synergistetes S Protein of unknown function (DUF2905) - - - - - - - - - - - - DUF2905 YYD2_k127_5492426_1 926569.ANT_19880 1.269e-81 278.0 COG0809@1|root,COG0809@2|Bacteria,2G5UZ@200795|Chloroflexi 200795|Chloroflexi J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) queA - 2.4.99.17 ko:K07568 - - - - ko00000,ko01000,ko03016 - - - Queuosine_synth YYD2_k127_5492945_8 926569.ANT_08350 1.648e-75 264.0 COG0243@1|root,COG1034@1|root,COG0243@2|Bacteria,COG1034@2|Bacteria 2|Bacteria C ATP synthesis coupled electron transport nuoG GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009405,GO:0010941,GO:0016020,GO:0016491,GO:0016651,GO:0030312,GO:0033668,GO:0035821,GO:0042981,GO:0043067,GO:0043069,GO:0044003,GO:0044068,GO:0044403,GO:0044419,GO:0044464,GO:0044531,GO:0044532,GO:0048037,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051536,GO:0051540,GO:0051701,GO:0051704,GO:0051817,GO:0052040,GO:0052041,GO:0052150,GO:0052248,GO:0052433,GO:0052490,GO:0055114,GO:0060548,GO:0065007,GO:0071944 1.6.5.3 ko:K00336 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Fer2_4,Molybdop_Fe4S4,Molybdopterin,Molydop_binding,NADH-G_4Fe-4S_3 YYD2_k127_5492945_5 926569.ANT_08360 7.754e-121 400.0 COG1005@1|root,COG1005@2|Bacteria,2G62Y@200795|Chloroflexi 200795|Chloroflexi C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone nuoH - 1.6.5.3 ko:K00337 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - NADHdh YYD2_k127_5492945_7 926569.ANT_08370 2.75e-78 264.0 COG1143@1|root,COG1143@2|Bacteria,2G6P8@200795|Chloroflexi 200795|Chloroflexi C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoI - 1.6.5.3 ko:K00338,ko:K05580 ko00190,ko01100,map00190,map01100 M00144,M00145 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Fer4 YYD2_k127_5492945_9 1128421.JAGA01000002_gene147 6.878e-36 142.0 COG0839@1|root,COG0839@2|Bacteria,2NPUC@2323|unclassified Bacteria 2|Bacteria C Belongs to the complex I subunit 6 family nuoJ GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 ko:K00339 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q3 YYD2_k127_5492945_10 1382306.JNIM01000001_gene3462 6.229e-31 126.0 COG0713@1|root,COG0713@2|Bacteria,2G6TP@200795|Chloroflexi 200795|Chloroflexi C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient - GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 ko:K00340 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q2 YYD2_k127_5492945_3 926569.ANT_08400 4.069e-216 691.0 COG1009@1|root,COG1009@2|Bacteria,2G5NJ@200795|Chloroflexi 200795|Chloroflexi CP NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein nuoL - 1.6.5.3 ko:K00341 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Proton_antipo_M,Proton_antipo_N YYD2_k127_5492945_2 926569.ANT_08410 1.073e-217 685.0 COG1008@1|root,COG1008@2|Bacteria,2G5VU@200795|Chloroflexi 200795|Chloroflexi C TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M - - 1.6.5.3 ko:K00342 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q5_N,Proton_antipo_M YYD2_k127_5492945_4 926569.ANT_08420 2.573e-156 507.0 COG1007@1|root,COG1007@2|Bacteria,2G5ZK@200795|Chloroflexi 200795|Chloroflexi C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoN - 1.6.5.3 ko:K00343 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Proton_antipo_M YYD2_k127_5492945_11 1184609.KILIM_015_00590 8.012e-06 50.0 COG1309@1|root,COG1309@2|Bacteria,2IJP2@201174|Actinobacteria 201174|Actinobacteria K Transcriptional regulator - - - - - - - - - - - - TetR_C_11,TetR_N YYD2_k127_5492945_0 518766.Rmar_2084 0.0 1153.0 COG1048@1|root,COG1048@2|Bacteria,4NDZT@976|Bacteroidetes,1FIXV@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate acnA - 4.2.1.3 ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00173,M00740 R01324,R01325,R01900 RC00497,RC00498,RC00618 br01601,ko00000,ko00001,ko00002,ko01000 - - - Aconitase,Aconitase_C YYD2_k127_5492945_6 926569.ANT_05570 9.381e-119 391.0 COG1816@1|root,COG1816@2|Bacteria,2G6AT@200795|Chloroflexi 200795|Chloroflexi F PFAM Adenosine AMP deaminase - - 3.5.4.4 ko:K01488 ko00230,ko01100,ko05340,map00230,map01100,map05340 - R01560,R02556 RC00477 ko00000,ko00001,ko01000 - - - A_deaminase YYD2_k127_5492945_1 926569.ANT_25290 5.347e-308 976.0 COG0653@1|root,COG0653@2|Bacteria,2G603@200795|Chloroflexi 200795|Chloroflexi U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane secA GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4 - - SEC-C,SecA_DEAD,SecA_PP_bind,SecA_SW YYD2_k127_5511133_6 240292.Ava_4728 1.122e-23 117.0 COG2374@1|root,COG2931@1|root,COG3591@1|root,COG2374@2|Bacteria,COG2931@2|Bacteria,COG3591@2|Bacteria,1GQ21@1117|Cyanobacteria,1HJBD@1161|Nostocales 1117|Cyanobacteria L Belongs to the TPP enzyme family - - - ko:K07004 - - - - ko00000 - - - DUF3616,Exo_endo_phos,FG-GAP,HemolysinCabind,LTD YYD2_k127_5511133_4 401053.AciPR4_0372 1.15e-35 156.0 COG2374@1|root,COG2374@2|Bacteria 2|Bacteria - - - - - ko:K07004 - - - - ko00000 - - - Big_5,Calx-beta,Exo_endo_phos,LTD,PKD YYD2_k127_5511133_5 1131269.AQVV01000024_gene2368 3.47e-30 131.0 COG4166@1|root,COG4166@2|Bacteria 2|Bacteria E transmembrane transport oppA GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006457,GO:0006810,GO:0006811,GO:0006820,GO:0006857,GO:0006869,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010876,GO:0015711,GO:0015718,GO:0015721,GO:0015833,GO:0015849,GO:0015850,GO:0030288,GO:0030313,GO:0031975,GO:0033036,GO:0033218,GO:0042277,GO:0042597,GO:0042886,GO:0042939,GO:0044464,GO:0046942,GO:0050896,GO:0051179,GO:0051234,GO:0061077,GO:0071702,GO:0071705,GO:1900750 - ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 - iECABU_c1320.ECABU_c15240,iECNA114_1301.ECNA114_1414,iECSF_1327.ECSF_1224,iNRG857_1313.NRG857_06385,iUMNK88_1353.UMNK88_1667 SBP_bac_5 YYD2_k127_5511133_2 1123057.P872_21170 4.017e-45 169.0 COG3631@1|root,COG3631@2|Bacteria 2|Bacteria S light absorption tauX - - ko:K07255,ko:K21700 ko00430,map00430 - R01685 RC00062 ko00000,ko00001,ko01000 - - - SnoaL_2 YYD2_k127_5511133_3 1172179.AUKV01000009_gene4532 1.149e-40 156.0 COG2846@1|root,COG2846@2|Bacteria,2HC8E@201174|Actinobacteria 201174|Actinobacteria D Hemerythrin HHE cation binding domain - - - - - - - - - - - - Hemerythrin YYD2_k127_5511133_1 196162.Noca_1617 2.417e-90 306.0 COG0053@1|root,COG0053@2|Bacteria 2|Bacteria P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - 2.5.1.105 ko:K04088,ko:K06897 ko00790,map00790 M00742 R10339 RC00121 ko00000,ko00001,ko00002,ko01000 - - - Cation_efflux,ZT_dimer YYD2_k127_5511133_0 909663.KI867150_gene2869 2.175e-163 522.0 COG0006@1|root,COG0006@2|Bacteria,1QNPN@1224|Proteobacteria,431BA@68525|delta/epsilon subdivisions,2WW9X@28221|Deltaproteobacteria 28221|Deltaproteobacteria E Creatinase/Prolidase N-terminal domain - - - - - - - - - - - - Creatinase_N,Peptidase_M24 YYD2_k127_5514116_5 926550.CLDAP_22520 6.275e-05 53.0 COG3103@1|root,COG4991@2|Bacteria 2|Bacteria T sh3 domain protein - - 2.7.11.1,3.4.21.107,3.5.1.28 ko:K01448,ko:K04771,ko:K08884 ko01503,ko02020,map01503,map02020 M00727,M00728 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01001,ko01002,ko01011,ko03036,ko03110 - - - SH3_3 YYD2_k127_5514116_0 926569.ANT_10860 0.0 2140.0 COG0086@1|root,COG0086@2|Bacteria,2G632@200795|Chloroflexi 200795|Chloroflexi K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates rpoC GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 - - - RNA_pol_Rpb1_1,RNA_pol_Rpb1_2,RNA_pol_Rpb1_3,RNA_pol_Rpb1_4,RNA_pol_Rpb1_5 YYD2_k127_5514116_2 926569.ANT_10690 4.996e-90 302.0 COG1402@1|root,COG1402@2|Bacteria,2G7B0@200795|Chloroflexi 200795|Chloroflexi S Creatinine amidohydrolase - - 3.5.2.10 ko:K01470 ko00330,map00330 - R01884 RC00615 ko00000,ko00001,ko01000 - - - Creatininase YYD2_k127_5514116_1 926569.ANT_30500 0.0 1163.0 COG0744@1|root,COG0744@2|Bacteria,2G5ZG@200795|Chloroflexi 200795|Chloroflexi M PFAM glycosyl transferase, family 51 - - - - - - - - - - - - Transgly,Transpeptidase YYD2_k127_5514116_4 926550.CLDAP_10960 1.034e-35 141.0 COG2030@1|root,COG2030@2|Bacteria,2G966@200795|Chloroflexi 200795|Chloroflexi I MaoC like domain - - - - - - - - - - - - MaoC_dehydratas YYD2_k127_5518308_0 926569.ANT_31100 2.482e-139 461.0 COG0747@1|root,COG0747@2|Bacteria,2G7MC@200795|Chloroflexi 200795|Chloroflexi E PFAM extracellular solute-binding protein, family 5 - - - ko:K02035 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - SBP_bac_5 YYD2_k127_5518308_2 926569.ANT_01420 9.211e-37 153.0 COG0745@1|root,COG0745@2|Bacteria 926569.ANT_01420|- T phosphorelay signal transduction system - - - - - - - - - - - - - YYD2_k127_5518308_1 1160707.AJIK01000020_gene1870 1.401e-125 419.0 COG1207@1|root,COG1207@2|Bacteria,1TP88@1239|Firmicutes,4H9V5@91061|Bacilli,26E43@186818|Planococcaceae 91061|Bacilli M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain glmU GO:0000270,GO:0000271,GO:0003674,GO:0003824,GO:0003977,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006629,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009252,GO:0009273,GO:0009987,GO:0016051,GO:0016740,GO:0016772,GO:0016779,GO:0030203,GO:0033692,GO:0034637,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0070569,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509 2.3.1.157,2.7.7.23 ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 M00362 R00416,R05332 RC00002,RC00004,RC00166 ko00000,ko00001,ko00002,ko01000 - - - Hexapep,NTP_transf_3,NTP_transferase YYD2_k127_5518308_3 1504823.CCMM01000013_gene2567 0.0005948 42.0 COG0295@1|root,COG0295@2|Bacteria,2NPJN@2323|unclassified Bacteria 2|Bacteria F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis cdd - 2.4.2.2,3.5.4.5 ko:K00756,ko:K01489 ko00240,ko00983,ko01100,map00240,map00983,map01100 - R01570,R01876,R01878,R02296,R02484,R02485,R08221 RC00063,RC00074,RC00514 ko00000,ko00001,ko01000 - - - dCMP_cyt_deam_1,dCMP_cyt_deam_2 YYD2_k127_5524216_3 497964.CfE428DRAFT_4451 9.578e-21 106.0 2C16S@1|root,2ZHJB@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - YYD2_k127_5524216_2 1396141.BATP01000038_gene1221 2.127e-52 198.0 COG1524@1|root,COG1524@2|Bacteria,46TNY@74201|Verrucomicrobia,2IV18@203494|Verrucomicrobiae 2|Bacteria U Type I phosphodiesterase / nucleotide pyrophosphatase - - - - - - - - - - - - CHB_HEX_C_1,PA14,Phosphodiest YYD2_k127_5524216_0 926569.ANT_31720 2.116e-306 945.0 COG2987@1|root,COG2987@2|Bacteria,2G5PQ@200795|Chloroflexi 200795|Chloroflexi E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate hutU - 4.2.1.49 ko:K01712 ko00340,ko01100,map00340,map01100 M00045 R02914 RC00804 ko00000,ko00001,ko00002,ko01000 - - - Urocanase,Urocanase_C,Urocanase_N YYD2_k127_5524216_1 926569.ANT_00140 5.57e-55 196.0 COG1959@1|root,COG1959@2|Bacteria,2G8ZH@200795|Chloroflexi 200795|Chloroflexi K transcriptional regulator, Rrf2 family - - - - - - - - - - - - Rrf2 YYD2_k127_5524216_4 926569.ANT_13170 3.686e-06 51.0 COG4758@1|root,COG4758@2|Bacteria,2G93M@200795|Chloroflexi 200795|Chloroflexi S membrane - - - - - - - - - - - - - YYD2_k127_5593884_0 765420.OSCT_0207 6.112e-187 599.0 COG0747@1|root,COG0747@2|Bacteria,2G85H@200795|Chloroflexi,3773I@32061|Chloroflexia 32061|Chloroflexia E Bacterial extracellular solute-binding proteins, family 5 Middle - - - ko:K02035 ko02024,map02024 M00239 - - ko00000,ko00001,ko00002,ko02000 3.A.1.5 - - SBP_bac_5 YYD2_k127_5593884_2 926569.ANT_29620 2.65e-162 517.0 COG1180@1|root,COG1180@2|Bacteria,2G6B2@200795|Chloroflexi 200795|Chloroflexi C PFAM Radical SAM domain protein - - 1.97.1.4 ko:K04069 - - R04710 - ko00000,ko01000 - - - Fer4_12,Radical_SAM YYD2_k127_5593884_4 926569.ANT_29910 4.284e-57 207.0 COG0746@1|root,COG0746@2|Bacteria,2G786@200795|Chloroflexi 200795|Chloroflexi H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor mobA - 2.7.7.77 ko:K03752 ko00790,ko01100,map00790,map01100 - R11581 - ko00000,ko00001,ko01000 - - - NTP_transf_3,NTPase_1 YYD2_k127_5593884_1 926569.ANT_12730 1.437e-162 521.0 COG0520@1|root,COG0520@2|Bacteria,2G5W7@200795|Chloroflexi 200795|Chloroflexi E TIGRFAM cysteine desulfurase family protein - - - - - - - - - - - - Aminotran_5 YYD2_k127_5593884_5 1423321.AS29_02665 1.92e-45 178.0 COG3274@1|root,COG3274@2|Bacteria,1V0QX@1239|Firmicutes,4HFH3@91061|Bacilli,1ZHG6@1386|Bacillus 91061|Bacilli S Acyltransferase family - - - - - - - - - - - - Acyl_transf_3 YYD2_k127_5593884_3 1521187.JPIM01000001_gene834 4.027e-162 518.0 COG0454@1|root,COG0456@2|Bacteria 2|Bacteria K acetyltransferase yghO - - - - - - - - - - - Acetyltransf_1 YYD2_k127_5644887_2 765420.OSCT_3000 3.109e-54 199.0 COG0484@1|root,COG0484@2|Bacteria 2|Bacteria O heat shock protein binding - - - - - - - - - - - - Cytochrom_CIII,Cytochrom_c3_2,Cytochrome_C7 YYD2_k127_5644887_0 765420.OSCT_3000 6.992e-130 426.0 COG0484@1|root,COG0484@2|Bacteria 2|Bacteria O heat shock protein binding - - - - - - - - - - - - Cytochrom_CIII,Cytochrom_c3_2,Cytochrome_C7 YYD2_k127_5644887_3 765420.OSCT_2999 1.875e-45 171.0 COG0492@1|root,COG0492@2|Bacteria 2|Bacteria C ferredoxin-NADP+ reductase activity - - - - - - - - - - - - FAD_binding_2,FAD_oxidored,Pyr_redox_2,Thioredoxin_3,cNMP_binding YYD2_k127_5644887_1 765420.OSCT_2998 1.443e-110 372.0 COG1251@1|root,COG1251@2|Bacteria,2G6YZ@200795|Chloroflexi 200795|Chloroflexi C PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - - - - - - - - - - FHA,Pyr_redox_2 YYD2_k127_5644887_6 1296415.JACC01000022_gene4121 8.578e-13 71.0 COG0348@1|root,COG0348@2|Bacteria,4NHSX@976|Bacteroidetes,1HYWP@117743|Flavobacteriia,2YHPQ@290174|Aquimarina 976|Bacteroidetes C 4Fe-4S dicluster domain yccM_2 - - - - - - - - - - - Fer4,Fer4_5,Fer4_7,Fer4_9 YYD2_k127_5644887_4 926569.ANT_08190 1.665e-23 102.0 COG1278@1|root,COG1278@2|Bacteria,2G7EU@200795|Chloroflexi 200795|Chloroflexi K 'Cold-shock' DNA-binding domain - - - ko:K03704 - - - - ko00000,ko03000 - - - CSD YYD2_k127_5644887_5 525904.Tter_0400 2.763e-22 102.0 COG0613@1|root,COG0613@2|Bacteria 2|Bacteria Q PHP domain protein - - 3.1.3.97 ko:K07053 - - R00188,R11188 RC00078 ko00000,ko01000 - - - Glyco_trans_1_4,Glyco_transf_4,PHP,PHP_C YYD2_k127_5655439_2 1454004.AW11_01231 7.463e-11 72.0 COG1361@1|root,COG2931@1|root,COG4932@1|root,COG1361@2|Bacteria,COG2931@2|Bacteria,COG4932@2|Bacteria,1MU7T@1224|Proteobacteria,2VH0Q@28216|Betaproteobacteria 28216|Betaproteobacteria Q COG2931, RTX toxins and related Ca2 -binding proteins - - - - - - - - - - - - SdrD_B YYD2_k127_5655439_1 399549.Msed_0010 2.302e-50 183.0 COG0537@1|root,arCOG00419@2157|Archaea,2XQK8@28889|Crenarchaeota 28889|Crenarchaeota F PFAM histidine triad (HIT) protein - - 2.7.7.53 ko:K19710 ko00230,map00230 - R00126,R01618 RC00002,RC02753,RC02795 ko00000,ko00001,ko01000 - - - HIT YYD2_k127_5655439_0 926569.ANT_26230 3.673e-99 333.0 COG1570@1|root,COG1570@2|Bacteria,2G5M3@200795|Chloroflexi 200795|Chloroflexi L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides xseA - 3.1.11.6 ko:K03601 ko03430,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - Exonuc_VII_L,tRNA_anti_2 YYD2_k127_5658737_1 929556.Solca_2974 8.491e-46 171.0 COG1047@1|root,COG1047@2|Bacteria,4NM29@976|Bacteroidetes,1ITWU@117747|Sphingobacteriia 976|Bacteroidetes O Peptidyl-prolyl cis-trans isomerase - - 5.2.1.8 ko:K01802,ko:K03775 - - - - ko00000,ko01000,ko03110 - - - FKBP_C YYD2_k127_5658737_0 1519464.HY22_00675 1.368e-57 211.0 COG0189@1|root,COG0189@2|Bacteria 2|Bacteria HJ Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - 6.3.2.29,6.3.2.30 ko:K03802,ko:K05844 - - - - ko00000,ko01000,ko03009 - - - RimK YYD2_k127_5658737_2 926550.CLDAP_07730 6.114e-43 164.0 COG1309@1|root,COG1309@2|Bacteria 2|Bacteria K transcriptional regulator MA20_10010 - - - - - - - - - - - TetR_N YYD2_k127_5658737_3 765420.OSCT_0044 9.293e-36 141.0 COG0842@1|root,COG0842@2|Bacteria,2G6PG@200795|Chloroflexi,37723@32061|Chloroflexia 32061|Chloroflexia V ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 YYD2_k127_5696611_4 926569.ANT_07000 8.727e-77 263.0 COG0111@1|root,COG0111@2|Bacteria,2G67B@200795|Chloroflexi 200795|Chloroflexi C D-isomer specific 2-hydroxyacid dehydrogenase serA - 1.1.1.310,1.1.1.399,1.1.1.95 ko:K00058,ko:K16843 ko00260,ko00270,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00270,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R01513,R05693 RC00031 ko00000,ko00001,ko00002,ko01000,ko04147 - - - 2-Hacid_dh,2-Hacid_dh_C,ACT YYD2_k127_5696611_0 926569.ANT_06990 2.503e-194 617.0 COG2317@1|root,COG2317@2|Bacteria,2G7UQ@200795|Chloroflexi 200795|Chloroflexi E Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues - - 3.4.17.19 ko:K01299 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M32 YYD2_k127_5696611_7 926569.ANT_06090 4.116e-30 134.0 COG3266@1|root,COG3266@2|Bacteria 2|Bacteria GM domain, Protein - - - - - - - - - - - - FG-GAP_2,WXG100 YYD2_k127_5696611_1 1242864.D187_003409 1.203e-152 503.0 COG0318@1|root,COG1020@1|root,COG0318@2|Bacteria,COG1020@2|Bacteria,1MU6G@1224|Proteobacteria 1224|Proteobacteria IQ COG0318, Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - - - - - - - - - - AMP-binding,AMP-binding_C,Condensation,Ketoacyl-synt_C,PP-binding,ketoacyl-synt YYD2_k127_5696611_12 234267.Acid_7388 3.364e-05 50.0 COG0236@1|root,COG0236@2|Bacteria,3Y91M@57723|Acidobacteria 57723|Acidobacteria IQ Phosphopantetheine attachment site - - - - - - - - - - - - PP-binding YYD2_k127_5696611_5 756272.Plabr_0902 1.504e-58 222.0 COG1696@1|root,COG1696@2|Bacteria,2IX06@203682|Planctomycetes 203682|Planctomycetes M membrane protein involved in D-alanine - - - ko:K19294 - - - - ko00000 - - - MBOAT YYD2_k127_5696611_11 272134.KB731324_gene2493 3.361e-08 65.0 COG2755@1|root,COG2755@2|Bacteria,1FZYY@1117|Cyanobacteria,1H9GA@1150|Oscillatoriales 1117|Cyanobacteria E lipolytic protein G-D-S-L family - - - - - - - - - - - - DUF1574 YYD2_k127_5696611_6 1123504.JQKD01000008_gene5341 1.7e-32 139.0 COG0204@1|root,COG0204@2|Bacteria 2|Bacteria I Acyl-transferase - - - - - - - - - - - - Acyltransferase YYD2_k127_5696611_2 1220534.B655_0740 3.929e-86 306.0 arCOG02499@1|root,arCOG10865@1|root,arCOG02499@2157|Archaea,arCOG10865@2157|Archaea 2157|Archaea S Periplasmic copper-binding protein (NosD) - - - - - - - - - - - - Beta_helix,DUF11,NosD YYD2_k127_5696611_10 926560.KE387023_gene1958 1.319e-14 81.0 2DRNI@1|root,33CD9@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - YYD2_k127_5696611_9 1111069.TCCBUS3UF1_9070 1.084e-20 100.0 2E64T@1|root,330TJ@2|Bacteria,1WK59@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus - - - - - - - - - - - - - - - YYD2_k127_5696611_8 926569.ANT_30850 1.704e-25 106.0 COG0694@1|root,COG0694@2|Bacteria 2|Bacteria O iron-sulfur cluster assembly nfuA - - - - - - - - - - - NifU YYD2_k127_5727005_3 926550.CLDAP_11890 1.195e-06 57.0 COG1262@1|root,COG1262@2|Bacteria 2|Bacteria T PFAM Formylglycine-generating sulfatase enzyme - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - FGE-sulfatase,Pkinase YYD2_k127_5727005_1 398767.Glov_0600 1.961e-83 306.0 COG2199@1|root,COG2203@1|root,COG4191@1|root,COG2203@2|Bacteria,COG3706@2|Bacteria,COG4191@2|Bacteria,1RCM9@1224|Proteobacteria 1224|Proteobacteria T Histidine kinase - - - - - - - - - - - - DUF3365,GAF_2,GGDEF,HATPase_c,HisKA,PAS,PAS_3,PAS_4,PAS_8,PAS_9,dCache_1 YYD2_k127_5727005_0 926569.ANT_08200 4.765e-101 335.0 COG0496@1|root,COG0496@2|Bacteria,2G6XI@200795|Chloroflexi 200795|Chloroflexi S Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates surE - 3.1.3.5 ko:K03787 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 - R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346 RC00017 ko00000,ko00001,ko01000 - - - SurE YYD2_k127_5727005_2 247490.KSU1_B0325 2.482e-46 175.0 COG0704@1|root,COG0704@2|Bacteria,2IYX4@203682|Planctomycetes 203682|Planctomycetes P Plays a role in the regulation of phosphate uptake - - - ko:K02039 - - - - ko00000 - - - PhoU YYD2_k127_5756646_2 35128.Thaps263945 0.0005997 43.0 COG0664@1|root,KOG2968@2759|Eukaryota,2XFRH@2836|Bacillariophyta 2836|Bacillariophyta I Patatin-like phospholipase - - 3.1.1.5 ko:K14676 ko00564,map00564 - R02746,R02747,R03416,R03417 RC00020,RC00037,RC00041,RC00094 ko00000,ko00001,ko01000 - - - Patatin,cNMP_binding YYD2_k127_5756646_0 926569.ANT_14810 0.0 1227.0 COG1529@1|root,COG2080@1|root,COG1529@2|Bacteria,COG2080@2|Bacteria,2G65D@200795|Chloroflexi 200795|Chloroflexi C aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - - - - - - - - - - Ald_Xan_dh_C,Ald_Xan_dh_C2,Fer2,Fer2_2 YYD2_k127_5756646_1 357808.RoseRS_4510 1.663e-57 203.0 COG0370@1|root,COG0370@2|Bacteria,2GBTA@200795|Chloroflexi,37667@32061|Chloroflexia 32061|Chloroflexia P Ferrous iron transport protein B C terminus - - - ko:K04759 - - - - ko00000,ko02000 9.A.8.1 - - FeoB_C,Gate YYD2_k127_5772846_3 880072.Desac_2131 2.052e-23 116.0 COG0823@1|root,COG0823@2|Bacteria,1MV09@1224|Proteobacteria,42PHP@68525|delta/epsilon subdivisions,2WIXN@28221|Deltaproteobacteria,2MQDX@213462|Syntrophobacterales 28221|Deltaproteobacteria U Involved in the TonB-independent uptake of proteins tolB GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - ko:K03641 - - - - ko00000,ko02000 2.C.1.2 - - PD40,TolB_N YYD2_k127_5772846_6 304371.MCP_1275 1.391e-12 79.0 COG2339@1|root,arCOG05366@1|root,arCOG02985@2157|Archaea,arCOG05366@2157|Archaea,2Y73S@28890|Euryarchaeota,2NB99@224756|Methanomicrobia 224756|Methanomicrobia S Protease prsW family - - - - - - - - - - - - PrsW-protease YYD2_k127_5772846_2 479435.Kfla_0454 1.425e-23 109.0 COG0664@1|root,COG0664@2|Bacteria,2GMPN@201174|Actinobacteria,4DMXW@85009|Propionibacteriales 201174|Actinobacteria K helix_turn_helix, cAMP Regulatory protein glxR GO:0000166,GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010675,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030312,GO:0030551,GO:0030552,GO:0030554,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043565,GO:0044212,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0062012,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2000874,GO:2001141 - ko:K10914 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 - - - ko00000,ko00001,ko03000 - - - HTH_Crp_2,cNMP_binding YYD2_k127_5772846_0 1173028.ANKO01000017_gene192 2.751e-91 307.0 COG0455@1|root,COG0455@2|Bacteria,1G1EJ@1117|Cyanobacteria,1H7J7@1150|Oscillatoriales 1117|Cyanobacteria D PFAM CobQ CobB MinD ParA nucleotide binding domain - - - - - - - - - - - - AAA_31,ParA YYD2_k127_5772846_5 383372.Rcas_3115 1.081e-12 72.0 28VCT@1|root,2ZHFH@2|Bacteria,2GB88@200795|Chloroflexi,377J8@32061|Chloroflexia 32061|Chloroflexia - - - - - - - - - - - - - - - YYD2_k127_5772846_1 402777.KB235903_gene1565 5.061e-53 190.0 COG2114@1|root,COG2114@2|Bacteria,1G335@1117|Cyanobacteria,1H8VG@1150|Oscillatoriales 1117|Cyanobacteria T Adenylyl- / guanylyl cyclase, catalytic domain - - - - - - - - - - - - Guanylate_cyc YYD2_k127_5780742_1 1379698.RBG1_1C00001G1677 4.132e-117 385.0 COG3239@1|root,COG3239@2|Bacteria,2NNTZ@2323|unclassified Bacteria 2|Bacteria I Fatty acid desaturase des - 1.14.19.23,1.14.19.45 ko:K10255 ko02020,map02020 - - - ko00000,ko00001,ko01000,ko01004 - - - FA_desaturase YYD2_k127_5780742_6 1944.JOAZ01000035_gene86 3.564e-14 78.0 COG3187@1|root,COG3187@2|Bacteria,2I9ND@201174|Actinobacteria,41AJV@629295|Streptomyces griseus group 201174|Actinobacteria O META domain hslJ - - ko:K03668 - - - - ko00000 - - - META YYD2_k127_5780742_5 1121033.AUCF01000026_gene2970 7.684e-47 178.0 COG0664@1|root,COG0664@2|Bacteria,1NPY0@1224|Proteobacteria,2TT13@28211|Alphaproteobacteria,2JS8J@204441|Rhodospirillales 204441|Rhodospirillales K Cyclic nucleotide-monophosphate binding domain - - - ko:K21564 - - - - ko00000,ko03000 - - - HTH_Crp_2,cNMP_binding YYD2_k127_5780742_8 1231190.NA8A_19263 2.557e-08 59.0 2EKB5@1|root,33E1I@2|Bacteria,1N7R4@1224|Proteobacteria,2UFB0@28211|Alphaproteobacteria,43MEF@69277|Phyllobacteriaceae 28211|Alphaproteobacteria S Domain of unknown function (DUF1858) - - - - - - - - - - - - DUF1858 YYD2_k127_5780742_10 1185876.BN8_03202 0.0002085 55.0 COG1413@1|root,COG2133@1|root,COG4454@1|root,COG1413@2|Bacteria,COG2133@2|Bacteria,COG4454@2|Bacteria,4NHMI@976|Bacteroidetes,47K6B@768503|Cytophagia 976|Bacteroidetes CG Membrane-bound dehydrogenase domain protein - - - - - - - - - - - - Copper-bind,HEAT_2 YYD2_k127_5780742_0 926569.ANT_27710 1.595e-320 1000.0 COG2010@1|root,COG3391@1|root,COG2010@2|Bacteria,COG3391@2|Bacteria 2|Bacteria CO amine dehydrogenase activity nirS GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.2.1,1.7.99.1 ko:K15864 ko00910,ko01120,map00910,map01120 M00529 R00143,R00783,R00785 RC00086,RC02797 ko00000,ko00001,ko00002,ko01000 - - - Cytochrom_C,Cytochrom_D1,Cytochrome_CBB3,GSDH YYD2_k127_5780742_3 1408224.SAMCCGM7_c3646 4.091e-74 269.0 COG0642@1|root,COG2205@2|Bacteria,1MUZQ@1224|Proteobacteria,2TSS7@28211|Alphaproteobacteria,4B70K@82115|Rhizobiaceae 28211|Alphaproteobacteria T Histidine kinase kdpD - 2.7.13.3 ko:K07646 ko02020,map02020 M00454 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - DUF4118,GAF_3,HATPase_c,HisKA,KdpD,Usp YYD2_k127_5780742_4 765420.OSCT_0418 1.557e-72 251.0 COG0745@1|root,COG0745@2|Bacteria,2G6JP@200795|Chloroflexi,3773X@32061|Chloroflexia 32061|Chloroflexia K Transcriptional regulatory protein, C terminal - - - ko:K07667 ko02020,ko02024,map02020,map02024 M00454 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C YYD2_k127_5780742_9 1499967.BAYZ01000182_gene4463 6.91e-05 53.0 COG1262@1|root,COG1262@2|Bacteria,2NPU7@2323|unclassified Bacteria 2|Bacteria G Sulfatase-modifying factor enzyme 1 - - - - - - - - - - - - FGE-sulfatase,PEGA,Peptidase_C14,TIR_2 YYD2_k127_5780742_2 671143.DAMO_0407 1.853e-78 266.0 COG0531@1|root,COG0531@2|Bacteria,2NNZQ@2323|unclassified Bacteria 2|Bacteria E Amino acid permease ydaO GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - - - - - - - - - - AA_permease_2 YYD2_k127_5794295_4 926569.ANT_13070 9.913e-69 241.0 COG1968@1|root,COG1968@2|Bacteria,2G6F7@200795|Chloroflexi 200795|Chloroflexi V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin uppP - 3.6.1.27 ko:K06153 ko00550,map00550 - R05627 RC00002 ko00000,ko00001,ko01000,ko01011 - - - BacA YYD2_k127_5794295_9 1121413.JMKT01000003_gene181 4.131e-10 65.0 2E14Q@1|root,32WJU@2|Bacteria 2|Bacteria J 23S rRNA-intervening sequence protein - - - - - - - - - - - - 23S_rRNA_IVP YYD2_k127_5794295_3 926569.ANT_16190 1.786e-128 419.0 COG0182@1|root,COG0182@2|Bacteria,2G5Z3@200795|Chloroflexi 200795|Chloroflexi J Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) mtnA - 5.3.1.23 ko:K08963 ko00270,ko01100,map00270,map01100 M00034 R04420 RC01151 ko00000,ko00001,ko00002,ko01000 - - - IF-2B YYD2_k127_5794295_5 324602.Caur_0590 9.57e-48 179.0 COG0235@1|root,COG0235@2|Bacteria,2G9E9@200795|Chloroflexi,377CT@32061|Chloroflexia 32061|Chloroflexia G PFAM class II aldolase adducin family protein - - 4.1.2.17 ko:K01628 ko00051,ko01120,map00051,map01120 - R02262 RC00603,RC00604 ko00000,ko00001,ko01000 - - - Aldolase_II YYD2_k127_5794295_2 316274.Haur_0632 7.956e-149 479.0 COG0343@1|root,COG0343@2|Bacteria,2G5RE@200795|Chloroflexi,3752Z@32061|Chloroflexia 32061|Chloroflexia F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) tgt - 2.4.2.29 ko:K00773 - - R03789,R10209 RC00063 ko00000,ko01000,ko03016 - - - TGT YYD2_k127_5794295_6 1449126.JQKL01000057_gene2258 1.291e-35 139.0 COG5496@1|root,COG5496@2|Bacteria,1VAZJ@1239|Firmicutes,24MWR@186801|Clostridia,2692N@186813|unclassified Clostridiales 186801|Clostridia S Thioesterase superfamily - - 3.1.2.29 ko:K18700 - - - - ko00000,ko01000 - - - 4HBT YYD2_k127_5794295_8 1713.JOFV01000004_gene3311 5.081e-15 79.0 2EG8Z@1|root,332XF@2|Bacteria,2GTHG@201174|Actinobacteria 201174|Actinobacteria - - - - - - - - - - - - - - - YYD2_k127_5794295_1 926569.ANT_13120 1.116e-181 586.0 COG0608@1|root,COG0608@2|Bacteria,2G5US@200795|Chloroflexi 200795|Chloroflexi L PFAM phosphoesterase, RecJ domain protein recJ - - ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DHH,DHHA1 YYD2_k127_5794295_0 926550.CLDAP_02690 4.621e-201 636.0 COG0516@1|root,COG0517@1|root,COG0516@2|Bacteria,COG0517@2|Bacteria,2G5ZX@200795|Chloroflexi 200795|Chloroflexi F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth guaB - 1.1.1.205 ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 M00050 R01130,R08240 RC00143,RC02207 ko00000,ko00001,ko00002,ko01000,ko04147 - - - CBS,IMPDH YYD2_k127_5794295_7 1317122.ATO12_00625 1.078e-29 125.0 COG1696@1|root,COG1696@2|Bacteria,4NFK5@976|Bacteroidetes,1HWM1@117743|Flavobacteriia,2YGNZ@290174|Aquimarina 976|Bacteroidetes M MBOAT, membrane-bound O-acyltransferase family - - - - - - - - - - - - MBOAT YYD2_k127_5883604_2 926569.ANT_13330 3.417e-42 158.0 COG0515@1|root,COG0515@2|Bacteria,2G850@200795|Chloroflexi 200795|Chloroflexi KLT Serine threonine protein kinase - - 2.7.11.1 ko:K08884 - - - - ko00000,ko01000,ko01001 - - - Pkinase YYD2_k127_5883604_1 926569.ANT_13320 1.786e-70 251.0 COG0745@1|root,COG1716@1|root,COG0745@2|Bacteria,COG1716@2|Bacteria 2|Bacteria T histone H2A K63-linked ubiquitination - - - - - - - - - - - - FHA,Guanylate_cyc,RDD,Trans_reg_C,Yop-YscD_cpl YYD2_k127_5883604_0 926560.KE387027_gene263 9.04e-82 280.0 COG2120@1|root,COG2120@2|Bacteria 2|Bacteria S N-acetylglucosaminylinositol deacetylase activity - - - ko:K22135 - - - - ko00000,ko01000 - - - PIG-L YYD2_k127_588442_4 545693.BMQ_0475 1.657e-11 72.0 COG1501@1|root,COG3509@1|root,COG1501@2|Bacteria,COG3509@2|Bacteria,1UZP5@1239|Firmicutes,4HAWI@91061|Bacilli,1ZF2M@1386|Bacillus 91061|Bacilli Q Esterase PHB depolymerase - - - - - - - - - - - - CHB_HEX_C_1,Esterase_phd YYD2_k127_588442_0 1173027.Mic7113_4543 3.251e-46 187.0 COG0823@1|root,COG2931@1|root,COG0823@2|Bacteria,COG2931@2|Bacteria 2|Bacteria Q calcium- and calmodulin-responsive adenylate cyclase activity - - - - - - - - - - - - DUF4214,DUF4347,HSP70,HemolysinCabind,PD40,Pkinase YYD2_k127_588442_3 545693.BMQ_0475 4.624e-12 78.0 COG1501@1|root,COG3509@1|root,COG1501@2|Bacteria,COG3509@2|Bacteria,1UZP5@1239|Firmicutes,4HAWI@91061|Bacilli,1ZF2M@1386|Bacillus 91061|Bacilli Q Esterase PHB depolymerase - - - - - - - - - - - - CHB_HEX_C_1,Esterase_phd YYD2_k127_588442_1 926550.CLDAP_30620 1.59e-20 104.0 COG1404@1|root,COG1404@2|Bacteria 2|Bacteria O Belongs to the peptidase S8 family - - - ko:K14645 ko02024,map02024 - - - ko00000,ko00001,ko01000,ko01002,ko03110 - - - Inhibitor_I9,Peptidase_S8,TIG YYD2_k127_588442_2 441768.ACL_0713 1.424e-12 76.0 COG0546@1|root,COG0546@2|Bacteria,3WUW8@544448|Tenericutes 544448|Tenericutes S HAD-hyrolase-like - - 3.1.3.18 ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 - R01334 RC00017 ko00000,ko00001,ko01000 - - - HAD_2 YYD2_k127_5895455_2 1122604.JONR01000007_gene2940 1.415e-08 57.0 COG0665@1|root,COG0665@2|Bacteria,1MVIZ@1224|Proteobacteria,1RQ50@1236|Gammaproteobacteria,1X3PM@135614|Xanthomonadales 135614|Xanthomonadales E acid dehydrogenase - - 1.4.5.1 ko:K00285 ko00360,map00360 - R01374,R09493 RC00006,RC00025 ko00000,ko00001,ko01000 - - - DAO YYD2_k127_5895455_0 768066.HELO_1555 3.431e-120 393.0 COG3938@1|root,COG3938@2|Bacteria,1NVF9@1224|Proteobacteria,1RRCW@1236|Gammaproteobacteria,1XNHY@135619|Oceanospirillales 135619|Oceanospirillales E Belongs to the proline racemase family - - 5.1.1.8 ko:K12658 ko00330,map00330 - R03296 RC00479 ko00000,ko00001,ko01000 - - - Pro_racemase YYD2_k127_5895455_1 511062.GU3_02590 2.478e-55 201.0 COG0329@1|root,COG0329@2|Bacteria,1MUCM@1224|Proteobacteria,1RNH9@1236|Gammaproteobacteria,1Y55W@135624|Aeromonadales 135624|Aeromonadales E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) - - 4.3.3.7 ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R10147 RC03062,RC03063 ko00000,ko00001,ko00002,ko01000 - - - DHDPS YYD2_k127_5916530_0 926569.ANT_17670 1.237e-162 517.0 COG0606@1|root,COG0606@2|Bacteria,2G65P@200795|Chloroflexi 200795|Chloroflexi O PFAM magnesium chelatase ChlI subunit - - - ko:K07391 - - - - ko00000 - - - ChlI,Mg_chelatase,Mg_chelatase_C YYD2_k127_5916530_1 357808.RoseRS_1997 5.683e-91 310.0 COG2379@1|root,COG2379@2|Bacteria,2G5RZ@200795|Chloroflexi,374XG@32061|Chloroflexia 32061|Chloroflexia C PFAM MOFRL domain protein - - 2.7.1.165 ko:K11529 ko00030,ko00260,ko00561,ko00630,ko00680,ko01100,ko01120,ko01130,ko01200,map00030,map00260,map00561,map00630,map00680,map01100,map01120,map01130,map01200 M00346 R08572 RC00002,RC00428 ko00000,ko00001,ko00002,ko01000 - - - DUF4147,MOFRL YYD2_k127_5916530_2 1502850.FG91_00464 7.18e-15 76.0 COG4618@1|root,COG4618@2|Bacteria,1NTI5@1224|Proteobacteria,2TR17@28211|Alphaproteobacteria,2KCWT@204457|Sphingomonadales 204457|Sphingomonadales V ABC-type protease lipase transport system, ATPase and permease - - - ko:K06148 - - - - ko00000,ko02000 3.A.1 - - ABC_membrane,ABC_tran YYD2_k127_5926623_1 926569.ANT_01580 1.551e-157 511.0 COG0474@1|root,COG0474@2|Bacteria,2G5ZS@200795|Chloroflexi 200795|Chloroflexi P TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC - - 3.6.3.8 ko:K01537 - - - - ko00000,ko01000 3.A.3.2 - - Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase YYD2_k127_5926623_2 671143.DAMO_0966 9.13e-138 447.0 COG0517@1|root,COG1994@1|root,COG0517@2|Bacteria,COG1994@2|Bacteria,2NPE1@2323|unclassified Bacteria 2|Bacteria S Peptidase family M50 spoIVFB GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - ko:K06212,ko:K06402 - - - - ko00000,ko01000,ko01002,ko02000 1.A.16.1.1,1.A.16.1.3 - - CBS,Form_Nir_trans,Peptidase_M50 YYD2_k127_5926623_4 457425.XNR_5920 4.797e-107 361.0 COG0156@1|root,COG0156@2|Bacteria,2GISV@201174|Actinobacteria 201174|Actinobacteria E Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA - - - - - - - - - - - - Aminotran_1_2,KR,PP-binding,PS-DH YYD2_k127_5926623_0 316274.Haur_0810 1.182e-203 655.0 COG0272@1|root,COG0272@2|Bacteria,2G5TK@200795|Chloroflexi,3756T@32061|Chloroflexia 32061|Chloroflexia L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA ligA GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 - R00382 RC00005 ko00000,ko00001,ko01000,ko03032,ko03400 - - - BRCT,DNA_ligase_OB,DNA_ligase_ZBD,DNA_ligase_aden,HHH_2,HHH_5 YYD2_k127_5926623_3 316274.Haur_1254 7.879e-113 369.0 COG0455@1|root,COG0455@2|Bacteria,2G9ZU@200795|Chloroflexi,3772G@32061|Chloroflexia 32061|Chloroflexia D NUBPL iron-transfer P-loop NTPase - - - - - - - - - - - - AAA_31 YYD2_k127_5926623_6 740709.A10D4_07410 6.565e-23 105.0 COG1595@1|root,COG1595@2|Bacteria,1R7KF@1224|Proteobacteria,1S2IU@1236|Gammaproteobacteria,2QG6I@267893|Idiomarinaceae 1236|Gammaproteobacteria K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 YYD2_k127_5934719_2 1382356.JQMP01000004_gene657 1.264e-71 250.0 COG0704@1|root,COG0704@2|Bacteria,2G6HD@200795|Chloroflexi,27XPS@189775|Thermomicrobia 189775|Thermomicrobia P Plays a role in the regulation of phosphate uptake - - - ko:K02039 - - - - ko00000 - - - PhoU YYD2_k127_5934719_1 926550.CLDAP_00810 1.034e-118 387.0 COG1117@1|root,COG1117@2|Bacteria,2G646@200795|Chloroflexi 200795|Chloroflexi P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system pstB - 3.6.3.27 ko:K02036 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.7 - - ABC_tran YYD2_k127_5934719_0 316274.Haur_3999 2.821e-126 409.0 COG0581@1|root,COG0581@2|Bacteria,2G6BI@200795|Chloroflexi,374ZR@32061|Chloroflexia 32061|Chloroflexia P TIGRFAM phosphate ABC transporter, inner membrane subunit PstA - - - ko:K02038 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - BPD_transp_1 YYD2_k127_593538_0 926569.ANT_28140 8.96e-115 372.0 COG0192@1|root,COG0192@2|Bacteria,2G5X0@200795|Chloroflexi 200795|Chloroflexi H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme metK GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 M00034,M00035,M00368,M00609 R00177,R04771 RC00021,RC01211 ko00000,ko00001,ko00002,ko01000 - - - S-AdoMet_synt_C,S-AdoMet_synt_M,S-AdoMet_synt_N YYD2_k127_593538_1 1173028.ANKO01000017_gene225 1.311e-32 146.0 COG0642@1|root,COG0745@1|root,COG2202@1|root,COG2203@1|root,COG3437@1|root,COG5002@1|root,COG0745@2|Bacteria,COG2202@2|Bacteria,COG2203@2|Bacteria,COG2205@2|Bacteria,COG3437@2|Bacteria,COG5002@2|Bacteria,1G09B@1117|Cyanobacteria,1H7M4@1150|Oscillatoriales 1117|Cyanobacteria T Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - - - - - - - - - - GAF,HATPase_c,HisKA,PAS_3,PAS_9,Response_reg YYD2_k127_5983378_3 1122611.KB903946_gene864 3.73e-51 193.0 COG0454@1|root,COG0456@2|Bacteria,2INZ5@201174|Actinobacteria 201174|Actinobacteria K Acetyltransferase (GNAT) family - - - - - - - - - - - - Acetyltransf_1 YYD2_k127_5983378_2 452637.Oter_2875 7.19e-68 240.0 COG0672@1|root,COG0672@2|Bacteria,46XX5@74201|Verrucomicrobia,3K8IC@414999|Opitutae 414999|Opitutae P Iron permease FTR1 family - - - ko:K07243 - - - - ko00000,ko02000 2.A.108.1,2.A.108.2 - - FTR1 YYD2_k127_5983378_1 383372.Rcas_1005 1.918e-115 381.0 COG0157@1|root,COG0157@2|Bacteria,2G6GJ@200795|Chloroflexi,375H1@32061|Chloroflexia 32061|Chloroflexia H Belongs to the NadC ModD family - - 2.4.2.19 ko:K00767 ko00760,ko01100,map00760,map01100 M00115 R03348 RC02877 ko00000,ko00001,ko00002,ko01000 - - - QRPTase_C,QRPTase_N YYD2_k127_5983378_0 357808.RoseRS_0438 7.74e-166 526.0 COG0379@1|root,COG0379@2|Bacteria,2G64Y@200795|Chloroflexi,375TJ@32061|Chloroflexia 32061|Chloroflexia H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate nadA - 2.5.1.72 ko:K03517 ko00760,ko01100,map00760,map01100 M00115 R04292 RC01119 ko00000,ko00001,ko00002,ko01000 - - - NadA YYD2_k127_5983378_4 1450525.JATV01000008_gene674 3.6e-33 138.0 COG0614@1|root,COG0614@2|Bacteria,4NTHD@976|Bacteroidetes,1I4WB@117743|Flavobacteriia,2NWWP@237|Flavobacterium 976|Bacteroidetes P PD-(D/E)XK nuclease superfamily - - - - - - - - - - - - PDDEXK_3 YYD2_k127_6034175_0 926569.ANT_24850 8.049e-153 492.0 COG1228@1|root,COG1228@2|Bacteria,2G5KM@200795|Chloroflexi 200795|Chloroflexi Q PFAM amidohydrolase hutI - 3.5.2.7 ko:K01468 ko00340,ko01100,map00340,map01100 M00045 R02288 RC00683 ko00000,ko00001,ko00002,ko01000 - - - Amidohydro_1,Amidohydro_3 YYD2_k127_6034175_1 926569.ANT_19090 3.431e-120 393.0 COG1232@1|root,COG1232@2|Bacteria,2G5VN@200795|Chloroflexi 200795|Chloroflexi H PFAM amine oxidase - - - - - - - - - - - - Amino_oxidase YYD2_k127_6036657_0 926569.ANT_03560 4.048e-193 613.0 COG1160@1|root,COG1160@2|Bacteria,2G5M0@200795|Chloroflexi 200795|Chloroflexi S GTPase that plays an essential role in the late steps of ribosome biogenesis der - - ko:K03977 - - - - ko00000,ko03009 - - - KH_dom-like,MMR_HSR1 YYD2_k127_6036657_4 1178825.ALIH01000008_gene721 6.816e-13 82.0 COG0823@1|root,COG0823@2|Bacteria,4NG4S@976|Bacteroidetes,1I1I2@117743|Flavobacteriia 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - ko:K03641 - - - - ko00000,ko02000 2.C.1.2 - - PD40 YYD2_k127_6036657_2 926569.ANT_29500 1.406e-52 192.0 COG1595@1|root,COG1595@2|Bacteria,2G6MG@200795|Chloroflexi 200795|Chloroflexi K sigma-70 region 2 domain protein - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 YYD2_k127_6036657_3 1123320.KB889562_gene6565 1.455e-52 200.0 COG0642@1|root,COG2205@2|Bacteria,2IIK0@201174|Actinobacteria 201174|Actinobacteria T ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - - - - - - - - - - HATPase_c,HisKA YYD2_k127_6036657_1 1122182.KB903836_gene5006 2.337e-83 282.0 COG0745@1|root,COG0745@2|Bacteria,2H3IN@201174|Actinobacteria 201174|Actinobacteria T Psort location Cytoplasmic, score - - - - - - - - - - - - Response_reg,Trans_reg_C YYD2_k127_6106627_4 926569.ANT_05580 1.268e-11 65.0 COG0496@1|root,COG0496@2|Bacteria,2G6XI@200795|Chloroflexi 200795|Chloroflexi S Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates surE - 3.1.3.5 ko:K03787 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 - R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346 RC00017 ko00000,ko00001,ko01000 - - - SurE YYD2_k127_6106627_3 383372.Rcas_3699 1.225e-15 89.0 COG4297@1|root,COG4297@2|Bacteria,2GAVQ@200795|Chloroflexi,376RZ@32061|Chloroflexia 32061|Chloroflexia S protein containing double-stranded beta helix domain - - - - - - - - - - - - - YYD2_k127_6106627_2 1288826.MSNKSG1_13272 4.278e-25 107.0 COG5304@1|root,COG5304@2|Bacteria,1N269@1224|Proteobacteria,1SAZ0@1236|Gammaproteobacteria,46BER@72275|Alteromonadaceae 1236|Gammaproteobacteria S protein conserved in bacteria - - - - - - - - - - - - CopG_antitoxin YYD2_k127_6106627_0 880073.Calab_3503 5.035e-32 127.0 COG2929@1|root,COG2929@2|Bacteria,2NRJV@2323|unclassified Bacteria 2|Bacteria S Ribonuclease toxin, BrnT, of type II toxin-antitoxin system - - - ko:K09803 - - - - ko00000 - - - BrnT_toxin YYD2_k127_6106627_1 357808.RoseRS_1485 2.763e-27 118.0 COG0366@1|root,COG0366@2|Bacteria,2G7SV@200795|Chloroflexi 200795|Chloroflexi G Alpha amylase, catalytic domain - - - - - - - - - - - - Alpha-amylase YYD2_k127_6115885_0 926569.ANT_23330 4.655e-150 494.0 COG0768@1|root,COG0768@2|Bacteria,2G66C@200795|Chloroflexi 200795|Chloroflexi M Penicillin-binding protein, dimerisation domain ftsI - 3.4.16.4 ko:K03587 ko00550,ko01501,map00550,map01501 - - - ko00000,ko00001,ko01000,ko01011,ko03036 - - - PBP_dimer,Transpeptidase YYD2_k127_6115885_2 926569.ANT_23310 2.761e-113 373.0 COG0275@1|root,COG0275@2|Bacteria,2G658@200795|Chloroflexi 200795|Chloroflexi J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA rsmH GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 ko:K03438 - - - - ko00000,ko01000,ko03009 - - - Methyltransf_5 YYD2_k127_6115885_6 926569.ANT_23300 3.485e-37 144.0 COG2001@1|root,COG2001@2|Bacteria,2G6ZC@200795|Chloroflexi 200795|Chloroflexi K Belongs to the MraZ family mraZ - - ko:K03925 - - - - ko00000 - - - MraZ YYD2_k127_6115885_3 1128421.JAGA01000002_gene694 6.508e-110 364.0 COG1092@1|root,COG1092@2|Bacteria 2|Bacteria J Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA rlmI - 2.1.1.191 ko:K06969 - - - - ko00000,ko01000,ko03009 - - - Methyltrans_SAM YYD2_k127_6115885_11 278963.ATWD01000001_gene3528 0.0004377 51.0 28MCN@1|root,2ZAQR@2|Bacteria,3Y8K1@57723|Acidobacteria,2JNFU@204432|Acidobacteriia 204432|Acidobacteriia - - - - - - - - - - - - - - - YYD2_k127_6115885_1 1144275.COCOR_02904 1.908e-134 437.0 COG0153@1|root,COG0153@2|Bacteria,1MVQD@1224|Proteobacteria,42Y39@68525|delta/epsilon subdivisions,2WSYZ@28221|Deltaproteobacteria,2YV2T@29|Myxococcales 28221|Deltaproteobacteria G Belongs to the GHMP kinase family. GalK subfamily galK - 2.7.1.6 ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00554,M00632 R01092 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko04147 - - - GHMP_kinases_C,GHMP_kinases_N,GalKase_gal_bdg YYD2_k127_6115885_8 926550.CLDAP_36980 5.764e-28 123.0 COG0845@1|root,COG0845@2|Bacteria,2G8X1@200795|Chloroflexi 200795|Chloroflexi M PFAM secretion protein HlyD family protein - - - - - - - - - - - - Biotin_lipoyl_2,HlyD_3 YYD2_k127_6115885_9 926550.CLDAP_36980 7.887e-27 120.0 COG0845@1|root,COG0845@2|Bacteria,2G8X1@200795|Chloroflexi 200795|Chloroflexi M PFAM secretion protein HlyD family protein - - - - - - - - - - - - Biotin_lipoyl_2,HlyD_3 YYD2_k127_6115885_4 765420.OSCT_2139 1.292e-93 312.0 COG1136@1|root,COG1136@2|Bacteria,2G7XA@200795|Chloroflexi 200795|Chloroflexi V ATPases associated with a variety of cellular activities - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran YYD2_k127_6115885_5 765420.OSCT_2138 1.111e-91 318.0 COG4591@1|root,COG4591@2|Bacteria,2G7ZF@200795|Chloroflexi 200795|Chloroflexi M MacB-like periplasmic core domain - - - - - - - - - - - - FtsX,MacB_PCD YYD2_k127_6115885_7 926550.CLDAP_36950 2.144e-36 144.0 COG4591@1|root,COG4591@2|Bacteria,2G85M@200795|Chloroflexi 200795|Chloroflexi M MacB-like periplasmic core domain - - - - - - - - - - - - FtsX,MacB_PCD YYD2_k127_6158042_3 926569.ANT_05350 4.956e-61 222.0 COG0500@1|root,COG0500@2|Bacteria 2|Bacteria Q methyltransferase activity bioC - 2.1.1.197 ko:K02169 ko00780,ko01100,map00780,map01100 M00572 R09543 RC00003,RC00460 ko00000,ko00001,ko00002,ko01000 - - - Methyltransf_11,Methyltransf_23,Methyltransf_25 YYD2_k127_6158042_4 391626.OAN307_c32700 4.089e-54 198.0 COG0175@1|root,COG0175@2|Bacteria,1MXUR@1224|Proteobacteria,2U5AP@28211|Alphaproteobacteria 28211|Alphaproteobacteria EH Reduction of activated sulfate into sulfite cysH - 1.8.4.10,1.8.4.8 ko:K00390 ko00920,ko01100,ko01120,map00920,map01100,map01120 M00176 R02021 RC00007,RC02862 ko00000,ko00001,ko00002,ko01000 - - - DUF934,PAPS_reduct YYD2_k127_6158042_0 926569.ANT_05360 1.449e-228 719.0 COG1243@1|root,COG1243@2|Bacteria,2G5ZZ@200795|Chloroflexi 200795|Chloroflexi BK Radical_SAM C-terminal domain - - 2.3.1.48 ko:K07739 - - - - ko00000,ko01000,ko03016,ko03036 - - - Acetyltransf_1,Radical_SAM,Radical_SAM_C YYD2_k127_6158042_5 439292.Bsel_2734 1.626e-17 89.0 COG2059@1|root,COG2059@2|Bacteria,1V43H@1239|Firmicutes,4HFWH@91061|Bacilli,26NWJ@186821|Sporolactobacillaceae 91061|Bacilli P Chromate transporter - - - ko:K07240 - - - - ko00000,ko02000 2.A.51.1 - - Chromate_transp YYD2_k127_6158042_6 1243664.CAVL020000010_gene4530 6.049e-10 68.0 COG2059@1|root,COG2059@2|Bacteria,1V42U@1239|Firmicutes,4HH2P@91061|Bacilli,1ZFWF@1386|Bacillus 91061|Bacilli P COG2059 Chromate transport protein ChrA - - - ko:K07240 - - - - ko00000,ko02000 2.A.51.1 - - Chromate_transp YYD2_k127_6158042_8 765420.OSCT_0653 2.419e-07 61.0 COG0589@1|root,COG0589@2|Bacteria,2GBQ1@200795|Chloroflexi,375ZM@32061|Chloroflexia 32061|Chloroflexia T PFAM UspA domain protein - - - - - - - - - - - - Usp YYD2_k127_6158042_2 926569.ANT_12620 4.227e-94 315.0 COG0266@1|root,COG0266@2|Bacteria,2G6BB@200795|Chloroflexi 200795|Chloroflexi L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates fpg - 3.2.2.23,4.2.99.18 ko:K10563 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Fapy_DNA_glyco,H2TH,zf-FPG_IleRS YYD2_k127_6158042_1 926569.ANT_12630 2.558e-136 439.0 COG0462@1|root,COG0462@2|Bacteria,2G5T8@200795|Chloroflexi 200795|Chloroflexi F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) prs - 2.7.6.1 ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 M00005 R01049 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - Pribosyl_synth,Pribosyltran_N YYD2_k127_6158844_0 1382306.JNIM01000001_gene1045 1.28e-64 228.0 COG2197@1|root,COG2197@2|Bacteria,2G6PA@200795|Chloroflexi 200795|Chloroflexi K Response regulator receiver - - - - - - - - - - - - GerE,Response_reg YYD2_k127_6158844_1 404589.Anae109_1809 6.859e-43 175.0 COG4585@1|root,COG4585@2|Bacteria,1N0JE@1224|Proteobacteria,42UG3@68525|delta/epsilon subdivisions,2WQFT@28221|Deltaproteobacteria,2Z1DF@29|Myxococcales 28221|Deltaproteobacteria T Histidine kinase - - - - - - - - - - - - HAMP,HATPase_c,HisKA_3 YYD2_k127_6158844_2 1396141.BATP01000005_gene5985 2.259e-10 67.0 COG2319@1|root,COG2319@2|Bacteria,46UIQ@74201|Verrucomicrobia,2IV42@203494|Verrucomicrobiae 203494|Verrucomicrobiae S WD domain, G-beta repeat - - - - - - - - - - - - PSCyt1,WD40 YYD2_k127_6164139_2 926550.CLDAP_19190 4.813e-179 567.0 COG0365@1|root,COG0365@2|Bacteria,2G5KE@200795|Chloroflexi 2|Bacteria I Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA acsA - 6.2.1.1 ko:K01895 ko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200 M00357 R00235,R00236,R00316,R00926,R01354 RC00004,RC00012,RC00043,RC00070,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000,ko01004 - - - ACAS_N,AMP-binding,AMP-binding_C YYD2_k127_6164139_11 316274.Haur_0357 6.652e-52 192.0 COG2186@1|root,COG2186@2|Bacteria 2|Bacteria K Transcriptional regulator fadR GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006355,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010563,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019216,GO:0019217,GO:0019219,GO:0019220,GO:0019222,GO:0019395,GO:0019752,GO:0030258,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032787,GO:0032991,GO:0032993,GO:0034440,GO:0042304,GO:0043436,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045723,GO:0045833,GO:0045834,GO:0045892,GO:0045893,GO:0045923,GO:0045934,GO:0045935,GO:0045936,GO:0046889,GO:0046890,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051252,GO:0051253,GO:0051254,GO:0055114,GO:0060255,GO:0062012,GO:0062013,GO:0065007,GO:0071071,GO:0071072,GO:0071704,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1903725,GO:1903726,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - ko:K03603,ko:K05799,ko:K22104 - - - - ko00000,ko03000 - - - FCD,FadR_C,GntR YYD2_k127_6164139_1 1177179.A11A3_10491 3.812e-181 582.0 COG0277@1|root,COG0277@2|Bacteria,1MXTV@1224|Proteobacteria,1RRN8@1236|Gammaproteobacteria,1XJ31@135619|Oceanospirillales 135619|Oceanospirillales C COG0277 FAD FMN-containing dehydrogenases - - 2.5.1.26 ko:K00803 ko00565,ko01100,ko04146,map00565,map01100,map04146 - R04311 RC00020,RC02886 ko00000,ko00001,ko01000 - - - FAD-oxidase_C,FAD_binding_4 YYD2_k127_6164139_4 378806.STAUR_5598 2.783e-154 503.0 COG0578@1|root,COG0578@2|Bacteria,1MUMY@1224|Proteobacteria,42N1B@68525|delta/epsilon subdivisions,2WJWS@28221|Deltaproteobacteria,2YTWC@29|Myxococcales 28221|Deltaproteobacteria C Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family glpD - 1.1.5.3 ko:K00111 ko00564,ko01110,map00564,map01110 - R00848 RC00029 ko00000,ko00001,ko01000 - - - DAO,DAO_C YYD2_k127_6164139_0 926569.ANT_09270 8.068e-242 756.0 COG1070@1|root,COG1070@2|Bacteria,2G7TQ@200795|Chloroflexi 200795|Chloroflexi G FGGY family of carbohydrate kinases, N-terminal domain - - - - - - - - - - - - FGGY_C,FGGY_N YYD2_k127_6164139_10 446470.Snas_6020 2.887e-52 202.0 2E809@1|root,332EJ@2|Bacteria,2H3RK@201174|Actinobacteria 201174|Actinobacteria - - - - - - - - - - - - - - - YYD2_k127_6164139_7 926550.CLDAP_37110 9.687e-105 346.0 COG1028@1|root,COG1028@2|Bacteria 926550.CLDAP_37110|- IQ oxidoreductase activity, acting on CH-OH group of donors - - - - - - - - - - - - - YYD2_k127_6164139_3 926550.CLDAP_36730 1.617e-165 528.0 COG1960@1|root,COG1960@2|Bacteria,2G5J5@200795|Chloroflexi 200795|Chloroflexi I Acyl-CoA dehydrogenase, N-terminal domain - - - - - - - - - - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N YYD2_k127_6164139_5 518766.Rmar_2209 2.834e-140 455.0 COG3173@1|root,COG3173@2|Bacteria,4NFE7@976|Bacteroidetes,1FJU1@1100069|Bacteroidetes Order II. Incertae sedis 976|Bacteroidetes S Phosphotransferase enzyme family - - - - - - - - - - - - APH YYD2_k127_6164139_12 335541.Swol_1996 8.317e-49 201.0 COG0664@1|root,COG1413@1|root,COG0664@2|Bacteria,COG1413@2|Bacteria 2|Bacteria C deoxyhypusine monooxygenase activity - - - ko:K03301 - - - - ko00000 2.A.12 - - HEAT_2,HTH_Crp_2,cNMP_binding YYD2_k127_6164139_13 324602.Caur_2581 8.184e-27 113.0 COG4454@1|root,COG4454@2|Bacteria,2G9EX@200795|Chloroflexi 200795|Chloroflexi P Blue (Type 1) copper domain protein - - - - - - - - - - - - - YYD2_k127_6164139_9 926550.CLDAP_26730 6.192e-91 303.0 COG1321@1|root,COG1918@1|root,COG1321@2|Bacteria,COG1918@2|Bacteria,2G6N4@200795|Chloroflexi 200795|Chloroflexi K iron dependent repressor - - - ko:K03709 - - - - ko00000,ko03000 - - - Fe_dep_repr_C,Fe_dep_repress,FeoA YYD2_k127_6164139_8 479434.Sthe_3148 7.781e-95 324.0 COG0428@1|root,COG0428@2|Bacteria,2G9IR@200795|Chloroflexi 200795|Chloroflexi P transporter - - - - - - - - - - - - - YYD2_k127_6164139_6 1121378.KB899704_gene2420 3.349e-128 418.0 COG2132@1|root,COG2132@2|Bacteria,1WJQI@1297|Deinococcus-Thermus 1297|Deinococcus-Thermus Q Multicopper oxidase - - - - - - - - - - - - Cu-oxidase_2,Cu-oxidase_3 YYD2_k127_6182404_0 926569.ANT_22970 2.913e-101 338.0 COG0531@1|root,COG0531@2|Bacteria,2G5ZF@200795|Chloroflexi 200795|Chloroflexi E Amino acid permease - - - - - - - - - - - - AA_permease_2 YYD2_k127_6182404_2 1382356.JQMP01000003_gene2415 8.336e-30 128.0 COG0204@1|root,COG0204@2|Bacteria,2G78P@200795|Chloroflexi,27Y83@189775|Thermomicrobia 189775|Thermomicrobia I Phosphate acyltransferases - - 2.3.1.51 ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R02241,R09381 RC00004,RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Acyltransferase YYD2_k127_6182404_3 316274.Haur_1470 3.358e-23 108.0 COG0204@1|root,COG0204@2|Bacteria 2|Bacteria I Acyl-transferase plsC - 2.3.1.51,2.7.4.25 ko:K00655,ko:K00945 ko00240,ko00561,ko00564,ko01100,ko01110,map00240,map00561,map00564,map01100,map01110 M00052,M00089 R00158,R00512,R01665,R02241,R09381 RC00002,RC00004,RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Acyltransferase YYD2_k127_6182404_1 926569.ANT_10810 1.984e-84 285.0 COG0283@1|root,COG0283@2|Bacteria,2G6I5@200795|Chloroflexi 200795|Chloroflexi F Belongs to the cytidylate kinase family. Type 1 subfamily cmk - 2.7.4.25 ko:K00945 ko00240,ko01100,map00240,map01100 M00052 R00158,R00512,R01665 RC00002 ko00000,ko00001,ko00002,ko01000 - - - Cytidylate_kin YYD2_k127_6182404_4 926569.ANT_15850 1.301e-09 68.0 COG4745@1|root,COG4745@2|Bacteria,2G9RB@200795|Chloroflexi 200795|Chloroflexi O Dolichyl-phosphate-mannose-protein mannosyltransferase - - - - - - - - - - - - - YYD2_k127_618321_1 1303518.CCALI_01587 2.069e-135 444.0 COG0277@1|root,COG0277@2|Bacteria 2|Bacteria C FAD linked oxidase domain protein dprE1 GO:0000271,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010383,GO:0016020,GO:0016051,GO:0031221,GO:0033692,GO:0034637,GO:0034645,GO:0035884,GO:0040007,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0070589,GO:0070592,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901576 1.1.3.8,1.1.98.3 ko:K00103,ko:K16653 ko00053,ko01100,map00053,map01100 M00129 R00647,R03184,R10053 RC00195,RC00346,RC00869 ko00000,ko00001,ko00002,ko01000 - - - ALO,FAD_binding_4 YYD2_k127_618321_3 1303518.CCALI_01588 5.715e-55 202.0 COG0300@1|root,COG0300@2|Bacteria 2|Bacteria S Belongs to the short-chain dehydrogenases reductases (SDR) family phbB - 1.1.1.333 ko:K16652 - - - - ko00000,ko01000 - - - adh_short YYD2_k127_618321_4 215803.DB30_6730 7.265e-41 166.0 COG2199@1|root,COG2203@1|root,COG2203@2|Bacteria,COG3706@2|Bacteria,1R7HC@1224|Proteobacteria,42Q7A@68525|delta/epsilon subdivisions,2WM81@28221|Deltaproteobacteria,2YW8C@29|Myxococcales 28221|Deltaproteobacteria T diguanylate cyclase - - - - - - - - - - - - GAF,GGDEF YYD2_k127_618321_2 926569.ANT_25680 1.818e-96 324.0 COG1597@1|root,COG1597@2|Bacteria,2G6UK@200795|Chloroflexi 200795|Chloroflexi I PFAM diacylglycerol kinase catalytic region - - - - - - - - - - - - DAGK_cat YYD2_k127_618321_0 926569.ANT_25670 1.056e-141 467.0 2EDFC@1|root,3366P@2|Bacteria,2G7IW@200795|Chloroflexi 200795|Chloroflexi S Helicase conserved C-terminal domain - - - - - - - - - - - - Helicase_C_3 YYD2_k127_619057_1 1121459.AQXE01000002_gene1409 1.038e-136 439.0 COG1027@1|root,COG1027@2|Bacteria,1R9JY@1224|Proteobacteria,42MFS@68525|delta/epsilon subdivisions,2X6YF@28221|Deltaproteobacteria,2M8DU@213115|Desulfovibrionales 28221|Deltaproteobacteria E PFAM Fumarate lyase aspA - 4.3.1.1 ko:K01744 ko00250,ko01100,map00250,map01100 - R00490 RC00316,RC02799 ko00000,ko00001,ko01000 - - - FumaraseC_C,Lyase_1,cNMP_binding YYD2_k127_619057_3 1128421.JAGA01000003_gene3536 4.669e-112 376.0 COG5002@1|root,COG5002@2|Bacteria,2NS5D@2323|unclassified Bacteria 2|Bacteria T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - 2.7.13.3 ko:K02484,ko:K07642 ko02020,map02020 M00450,M00645,M00646,M00648 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HAMP,HATPase_c,HisKA YYD2_k127_619057_7 1128421.JAGA01000003_gene3537 1.134e-93 312.0 COG0745@1|root,COG0745@2|Bacteria,2NPCK@2323|unclassified Bacteria 2|Bacteria T Two component transcriptional regulator, winged helix family - - - - - - - - - - - - Response_reg,Trans_reg_C YYD2_k127_619057_0 324602.Caur_2655 1.082e-168 560.0 COG0842@1|root,COG1131@1|root,COG1716@1|root,COG0842@2|Bacteria,COG1131@2|Bacteria,COG1716@2|Bacteria,2G7J8@200795|Chloroflexi,374RZ@32061|Chloroflexia 32061|Chloroflexia V ABC transporter related - - - - - - - - - - - - ABC2_membrane,ABC_tran,FHA YYD2_k127_619057_8 266117.Rxyl_0021 4.992e-64 238.0 COG0515@1|root,COG2815@1|root,COG0515@2|Bacteria,COG2815@2|Bacteria,2GJ1J@201174|Actinobacteria,4CPU4@84995|Rubrobacteria 84995|Rubrobacteria KLT Serine threonine protein kinase - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - PASTA,Pkinase YYD2_k127_619057_10 926569.ANT_08800 0.0002798 45.0 COG4257@1|root,COG4257@2|Bacteria 2|Bacteria V antibiotic catabolic process - - - - - - - - - - - - Calx-beta,DUF4082,DUF5011,SLH YYD2_k127_619057_9 889378.Spiaf_1100 2.321e-21 106.0 COG2866@1|root,COG2866@2|Bacteria 2|Bacteria E metallocarboxypeptidase activity - - - ko:K14054 - - - - ko00000 - - - Peptidase_M14 YYD2_k127_619057_5 1254432.SCE1572_20265 4.659e-96 319.0 COG0410@1|root,COG0410@2|Bacteria,1MVVC@1224|Proteobacteria,42M9C@68525|delta/epsilon subdivisions,2WJ75@28221|Deltaproteobacteria,2YV0S@29|Myxococcales 28221|Deltaproteobacteria E ABC transporter - - - ko:K01996 ko02010,ko02024,map02010,map02024 M00237 - - ko00000,ko00001,ko00002,ko02000 3.A.1.4 - - ABC_tran,BCA_ABC_TP_C YYD2_k127_619057_6 1254432.SCE1572_20260 5.462e-96 324.0 COG0411@1|root,COG0411@2|Bacteria,1MUFT@1224|Proteobacteria,42QV6@68525|delta/epsilon subdivisions,2WMN1@28221|Deltaproteobacteria,2Z08T@29|Myxococcales 28221|Deltaproteobacteria E Branched-chain amino acid ATP-binding cassette transporter - - - ko:K01995 ko02010,ko02024,map02010,map02024 M00237 - - ko00000,ko00001,ko00002,ko02000 3.A.1.4 - - ABC_tran,BCA_ABC_TP_C YYD2_k127_619057_4 1254432.SCE1572_20255 7.086e-107 358.0 COG4177@1|root,COG4177@2|Bacteria,1NPII@1224|Proteobacteria,42TEH@68525|delta/epsilon subdivisions,2WPV9@28221|Deltaproteobacteria 28221|Deltaproteobacteria U Belongs to the binding-protein-dependent transport system permease family - - - ko:K01998 ko02010,ko02024,map02010,map02024 M00237 - - ko00000,ko00001,ko00002,ko02000 3.A.1.4 - - BPD_transp_2 YYD2_k127_619057_2 1254432.SCE1572_20250 1.326e-118 388.0 COG0559@1|root,COG0683@1|root,COG0559@2|Bacteria,COG0683@2|Bacteria,1N5XH@1224|Proteobacteria,42PN7@68525|delta/epsilon subdivisions,2WIRP@28221|Deltaproteobacteria,2Z0ZI@29|Myxococcales 28221|Deltaproteobacteria U Belongs to the binding-protein-dependent transport system permease family - - - ko:K01997,ko:K01999 ko02010,ko02024,map02010,map02024 M00237 - - ko00000,ko00001,ko00002,ko02000 3.A.1.4 - - BPD_transp_2 YYD2_k127_6196904_1 765420.OSCT_2817 2.355e-06 56.0 COG3935@1|root,COG3935@2|Bacteria,2G6W5@200795|Chloroflexi,3765A@32061|Chloroflexia 32061|Chloroflexia L TIGRFAM primosome, DnaD subunit - - - - - - - - - - - - DnaB_2 YYD2_k127_6196904_0 926550.CLDAP_03390 1.396e-209 670.0 COG0247@1|root,COG2181@1|root,COG0247@2|Bacteria,COG2181@2|Bacteria,2G5X6@200795|Chloroflexi 200795|Chloroflexi C 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - - - - - - - - - - CCG,Fer4_8,Nitrate_red_gam YYD2_k127_6212953_1 926569.ANT_17860 2.955e-150 489.0 COG0068@1|root,COG0068@2|Bacteria,2G5QN@200795|Chloroflexi 200795|Chloroflexi O Belongs to the carbamoyltransferase HypF family hypF - - ko:K04656 - - - - ko00000 - - - Acylphosphatase,Sua5_yciO_yrdC,zf-HYPF YYD2_k127_6212953_4 67373.JOBF01000002_gene1205 1.714e-24 104.0 COG0298@1|root,COG0298@2|Bacteria,2IMSQ@201174|Actinobacteria 201174|Actinobacteria O Hydrogenase expression formation protein - - - ko:K04653 - - - - ko00000 - - - HupF_HypC YYD2_k127_6212953_0 357808.RoseRS_0974 1.276e-166 530.0 COG0409@1|root,COG0409@2|Bacteria,2G5MS@200795|Chloroflexi,376PX@32061|Chloroflexia 32061|Chloroflexia O TIGRFAM hydrogenase expression formation protein HypD - - - ko:K04654 - - - - ko00000 - - - HypD YYD2_k127_6212953_3 324602.Caur_2893 3.472e-48 178.0 COG1943@1|root,COG1943@2|Bacteria 2|Bacteria L Transposase - - - ko:K07491 - - - - ko00000 - - - Y1_Tnp YYD2_k127_6212953_2 926569.ANT_17890 1.399e-63 223.0 COG0309@1|root,COG0309@2|Bacteria,2G5MV@200795|Chloroflexi 200795|Chloroflexi O hydrogenase expression formation protein HypE hypE - - ko:K04655 - - - - ko00000 - - - AIRS,AIRS_C YYD2_k127_623400_0 926569.ANT_06560 1.8e-60 224.0 COG1807@1|root,COG1807@2|Bacteria 2|Bacteria M 4-amino-4-deoxy-L-arabinose transferase activity - - - - - - - - - - - - PMT,PMT_2 YYD2_k127_623400_1 29306.JOBE01000038_gene3097 0.0001275 53.0 2DBRU@1|root,2ZANA@2|Bacteria,2GP2Q@201174|Actinobacteria 201174|Actinobacteria - - - - - - - - - - - - - - - YYD2_k127_6242803_0 926569.ANT_23100 1.425e-298 924.0 COG0178@1|root,COG0178@2|Bacteria,2G60U@200795|Chloroflexi 200795|Chloroflexi L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate uvrA - - ko:K03701 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - ABC_tran YYD2_k127_6242803_1 926569.ANT_20740 1.003e-67 237.0 COG1595@1|root,COG1595@2|Bacteria,2G6X7@200795|Chloroflexi 200795|Chloroflexi K TIGRFAM RNA polymerase sigma factor, sigma-70 family - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 YYD2_k127_6242803_2 926569.ANT_20750 1.982e-64 228.0 COG1307@1|root,COG1307@2|Bacteria 2|Bacteria S lipid binding purD - - - - - - - - - - - DegV YYD2_k127_6264759_2 926569.ANT_04140 4.971e-74 250.0 COG0542@1|root,COG0542@2|Bacteria,2G62D@200795|Chloroflexi 200795|Chloroflexi O ATPase associated with various cellular activities, AAA_5 - - - ko:K03696 ko01100,map01100 - - - ko00000,ko03110 - - - AAA,AAA_2,ClpB_D2-small,Clp_N YYD2_k127_6264759_7 926569.ANT_04140 1.439e-29 121.0 COG0542@1|root,COG0542@2|Bacteria,2G62D@200795|Chloroflexi 200795|Chloroflexi O ATPase associated with various cellular activities, AAA_5 - - - ko:K03696 ko01100,map01100 - - - ko00000,ko03110 - - - AAA,AAA_2,ClpB_D2-small,Clp_N YYD2_k127_6264759_0 357808.RoseRS_0174 5.895e-114 376.0 COG0310@1|root,COG0310@2|Bacteria,2G6ZN@200795|Chloroflexi,376DK@32061|Chloroflexia 32061|Chloroflexia P PFAM cobalamin (vitamin B12) biosynthesis CbiM protein - - - ko:K02007 ko02010,map02010 M00245,M00246 - - ko00000,ko00001,ko00002,ko02000 3.A.1.18,3.A.1.22,3.A.1.23 - - CbiM,PDGLE YYD2_k127_6264759_4 765420.OSCT_1698 4.845e-70 245.0 COG0619@1|root,COG0619@2|Bacteria,2G7CE@200795|Chloroflexi,37758@32061|Chloroflexia 32061|Chloroflexia P TIGRFAM cobalt ABC transporter, inner membrane subunit CbiQ - - - ko:K02008 ko02010,map02010 M00245,M00246 - - ko00000,ko00001,ko00002,ko02000 3.A.1.18,3.A.1.22,3.A.1.23 - - CbiQ YYD2_k127_6264759_1 357808.RoseRS_0169 6.455e-94 314.0 COG1122@1|root,COG1122@2|Bacteria,2G6RD@200795|Chloroflexi,3764I@32061|Chloroflexia 32061|Chloroflexia P ABC transporter - - - ko:K02006 ko02010,map02010 M00245,M00246 - - ko00000,ko00001,ko00002,ko02000 3.A.1.18,3.A.1.22,3.A.1.23 - - ABC_tran YYD2_k127_6264759_3 383372.Rcas_2874 3.122e-71 265.0 COG3210@1|root,COG3210@2|Bacteria,2G8VW@200795|Chloroflexi,377DU@32061|Chloroflexia 2|Bacteria M TIGRFAM polymorphic outer membrane protein - - - ko:K21449 - - - - ko00000,ko02000 1.B.40.2 - - Beta_helix,Peptidase_S74 YYD2_k127_6264759_5 1449065.JMLL01000015_gene4309 2.093e-62 241.0 28NRQ@1|root,2ZBQX@2|Bacteria,1RC0K@1224|Proteobacteria,2U5DZ@28211|Alphaproteobacteria 28211|Alphaproteobacteria - - - - - - - - - - - - - - - YYD2_k127_6264759_6 383372.Rcas_2873 1.514e-39 158.0 COG1361@1|root,COG3210@1|root,COG1361@2|Bacteria,COG3210@2|Bacteria,2G8VW@200795|Chloroflexi,377DU@32061|Chloroflexia 2|Bacteria M TIGRFAM polymorphic outer membrane protein - - - ko:K21449 - - - - ko00000,ko02000 1.B.40.2 - - Beta_helix,DUF11,Sigma70_r2,zf-HC2 YYD2_k127_6278849_1 926569.ANT_13270 5.425e-95 331.0 COG1940@1|root,COG1940@2|Bacteria,2G6I0@200795|Chloroflexi 200795|Chloroflexi GK PFAM ROK family protein - - 2.7.1.2 ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - ROK YYD2_k127_6278849_0 926569.ANT_13260 2.978e-162 537.0 COG0391@1|root,COG0391@2|Bacteria,2G5MJ@200795|Chloroflexi 200795|Chloroflexi S Required for morphogenesis under gluconeogenic growth conditions - - - - - - - - - - - - UPF0052 YYD2_k127_630971_6 1220534.B655_0449 9.902e-13 70.0 arCOG12320@1|root,arCOG12320@2157|Archaea 2157|Archaea - - - - - - - - - - - - - - - YYD2_k127_630971_5 395963.Bind_1881 4.447e-19 97.0 COG2020@1|root,COG2020@2|Bacteria,1RDC4@1224|Proteobacteria,2TUXA@28211|Alphaproteobacteria,3NBTJ@45404|Beijerinckiaceae 28211|Alphaproteobacteria O Ergosterol biosynthesis ERG4/ERG24 family - - - - - - - - - - - - PEMT YYD2_k127_630971_2 521045.Kole_0198 3.915e-32 135.0 COG1814@1|root,COG1814@2|Bacteria,2GDXP@200918|Thermotogae 200918|Thermotogae S VIT family - - - - - - - - - - - - VIT1 YYD2_k127_630971_3 243275.TDE_1382 3.6e-21 96.0 COG0640@1|root,COG0640@2|Bacteria,2J8I1@203691|Spirochaetes 203691|Spirochaetes K transcriptional regulator - - - ko:K21903 - - - - ko00000,ko03000 - - - HTH_5 YYD2_k127_630971_0 1304865.JAGF01000001_gene1436 4.652e-174 554.0 COG2271@1|root,COG2271@2|Bacteria 2|Bacteria G transmembrane transporter activity - - - - - - - - - - - - MFS_1 YYD2_k127_630971_4 1268072.PSAB_02485 1.856e-19 98.0 28IEB@1|root,2Z8GD@2|Bacteria,1VCER@1239|Firmicutes,4I70C@91061|Bacilli,26VR2@186822|Paenibacillaceae 91061|Bacilli - - - - - - - - - - - - - - DUF4037 YYD2_k127_630971_1 358220.C380_01020 3.845e-79 283.0 COG2211@1|root,COG2211@2|Bacteria,1MVUM@1224|Proteobacteria,2W4ZW@28216|Betaproteobacteria 28216|Betaproteobacteria G MFS/sugar transport protein - - - ko:K03292 - - - - ko00000 2.A.2 - - MFS_2 YYD2_k127_6317012_3 1179778.PMM47T1_16018 2.753e-05 52.0 COG0304@1|root,COG0304@2|Bacteria,1MU1X@1224|Proteobacteria,1RN9K@1236|Gammaproteobacteria 1236|Gammaproteobacteria I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP fabF_2 - 2.3.1.179 ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119 RC00039,RC02728,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Ketoacyl-synt_C,ketoacyl-synt YYD2_k127_6317012_0 192952.MM_3016 5.082e-89 314.0 COG1122@1|root,arCOG00188@2157|Archaea,2XV36@28890|Euryarchaeota,2NAFE@224756|Methanomicrobia 224756|Methanomicrobia P ATPases associated with a variety of cellular activities - - - ko:K16786,ko:K16787 ko02010,map02010 M00582 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 - - ABC_tran YYD2_k127_6317012_1 1128421.JAGA01000003_gene3229 1.099e-22 106.0 COG2890@1|root,COG2890@2|Bacteria 2|Bacteria J protein-(glutamine-N5) methyltransferase activity - - - - - - - - - - - - Methyltransf_25,NodS,PIG-L YYD2_k127_6317012_2 311424.DhcVS_110 1.787e-05 54.0 2DDUA@1|root,2ZJB8@2|Bacteria,2GBVN@200795|Chloroflexi,34CYW@301297|Dehalococcoidia 301297|Dehalococcoidia - - - - - - - - - - - - - - - YYD2_k127_6317012_4 190304.FN2006 0.0004651 51.0 COG0619@1|root,COG0619@2|Bacteria,37AW0@32066|Fusobacteria 32066|Fusobacteria P Cobalt transport protein - - - ko:K16785 ko02010,map02010 M00582 - - ko00000,ko00001,ko00002,ko02000 3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 - - CbiQ YYD2_k127_6325555_1 640081.Dsui_2991 1.492e-52 197.0 COG0715@1|root,COG2199@1|root,COG0715@2|Bacteria,COG3706@2|Bacteria,1R7HC@1224|Proteobacteria,2WGZJ@28216|Betaproteobacteria,2KVQZ@206389|Rhodocyclales 206389|Rhodocyclales T NMT1/THI5 like - - - - - - - - - - - - GGDEF,NMT1,PAS_4 YYD2_k127_6325555_0 383372.Rcas_0264 8.542e-115 391.0 COG5184@1|root,COG5184@2|Bacteria,2G8WU@200795|Chloroflexi,3765G@32061|Chloroflexia 32061|Chloroflexia DZ PFAM regulator of chromosome condensation, RCC1 - - - - - - - - - - - - - YYD2_k127_6325555_2 1380386.JIAW01000021_gene2113 3.793e-05 54.0 COG3391@1|root,COG3391@2|Bacteria,2GK45@201174|Actinobacteria,23EVE@1762|Mycobacteriaceae 201174|Actinobacteria S 40-residue YVTN family beta-propeller repeat - - - - - - - - - - - - Lactonase,PD40,PQQ_2 YYD2_k127_6329243_3 926569.ANT_20420 1.858e-38 149.0 COG1197@1|root,COG1197@2|Bacteria,2G5UW@200795|Chloroflexi 200795|Chloroflexi L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site mfd - - ko:K03723 ko03420,map03420 - - - ko00000,ko00001,ko01000,ko03400 - - - CarD_CdnL_TRCF,DEAD,Helicase_C,TRCF YYD2_k127_6329243_1 926569.ANT_20430 4.84e-75 257.0 COG0193@1|root,COG0193@2|Bacteria,2G6SW@200795|Chloroflexi 200795|Chloroflexi J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis pth GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 ko:K01056 - - - - ko00000,ko01000,ko03012 - - - Pept_tRNA_hydro YYD2_k127_6329243_4 926569.ANT_20440 2.216e-22 106.0 COG1376@1|root,COG1376@2|Bacteria,2G9TK@200795|Chloroflexi 200795|Chloroflexi S ErfK ybiS ycfS ynhG family protein - - - - - - - - - - - - - YYD2_k127_6329243_2 926569.ANT_03760 2.305e-47 173.0 COG2018@1|root,COG2018@2|Bacteria,2G8WW@200795|Chloroflexi 200795|Chloroflexi S PFAM Roadblock LC7 family protein - - - ko:K07131 - - - - ko00000 - - - Robl_LC7 YYD2_k127_6329243_0 926569.ANT_25410 1.233e-128 413.0 COG0504@1|root,COG0504@2|Bacteria,2G5U0@200795|Chloroflexi 200795|Chloroflexi F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates pyrG - 6.3.4.2 ko:K01937 ko00240,ko01100,map00240,map01100 M00052 R00571,R00573 RC00010,RC00074 ko00000,ko00001,ko00002,ko01000 - - - CTP_synth_N,GATase YYD2_k127_6335600_1 926569.ANT_10420 1.143e-79 274.0 COG1005@1|root,COG1005@2|Bacteria,2G60S@200795|Chloroflexi 200795|Chloroflexi C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone nuoH - 1.6.5.3 ko:K00337 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - NADHdh YYD2_k127_6335600_2 926569.ANT_10430 4.941e-41 159.0 COG0839@1|root,COG0839@2|Bacteria,2G777@200795|Chloroflexi 200795|Chloroflexi C Belongs to the complex I subunit 6 family - - 1.6.5.3 ko:K00339 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q3 YYD2_k127_6335600_3 926550.CLDAP_08800 4.586e-32 127.0 COG0713@1|root,COG0713@2|Bacteria,2G782@200795|Chloroflexi 200795|Chloroflexi C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient nuoK - 1.6.5.3 ko:K00340,ko:K05576 ko00190,ko01100,map00190,map01100 M00144,M00145 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Oxidored_q2 YYD2_k127_6335600_0 161156.JQKW01000009_gene1593 2.119e-121 409.0 COG1009@1|root,COG1009@2|Bacteria,2GHMS@200940|Thermodesulfobacteria 200940|Thermodesulfobacteria CP NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus - - 1.6.5.3 ko:K00341 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - Proton_antipo_C,Proton_antipo_M,Proton_antipo_N YYD2_k127_6337774_2 926569.ANT_12080 4.326e-83 284.0 COG0739@1|root,COG1388@1|root,COG0739@2|Bacteria,COG1388@2|Bacteria 2|Bacteria M LysM domain - - - - - - - - - - - - LysM,OapA,OapA_N,Peptidase_M23 YYD2_k127_6337774_0 926569.ANT_12100 2.939e-140 462.0 COG0739@1|root,COG1388@1|root,COG0739@2|Bacteria,COG1388@2|Bacteria 2|Bacteria M LysM domain - - - - - - - - - - - - LysM,OapA,OapA_N,Peptidase_M23 YYD2_k127_6337774_1 926569.ANT_12110 2.853e-127 424.0 COG0739@1|root,COG1388@1|root,COG0739@2|Bacteria,COG1388@2|Bacteria 2|Bacteria M LysM domain - - 2.7.7.6 ko:K03046,ko:K03641,ko:K08642 ko00230,ko00240,ko01100,ko02024,ko03020,map00230,map00240,map01100,map02024,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko01002,ko02000,ko03021,ko03400 2.C.1.2 - - Glyco_hydro_18,LysM,OapA,PD40,Peptidase_M23 YYD2_k127_6337774_4 573413.Spirs_3771 2.576e-08 66.0 COG0784@1|root,COG3829@1|root,COG3920@1|root,COG0784@2|Bacteria,COG3829@2|Bacteria,COG3920@2|Bacteria 2|Bacteria T Histidine kinase pdtaS - 2.7.13.3,2.7.7.65 ko:K00936,ko:K02030,ko:K21084 ko02026,map02026 M00236,M00839 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02000,ko02022 3.A.1.3 - - HATPase_c,HATPase_c_2,H_kinase_N,HisKA_2 YYD2_k127_6337774_3 1121918.ARWE01000001_gene2532 4.16e-34 147.0 COG2202@1|root,COG4191@1|root,COG4936@1|root,COG2202@2|Bacteria,COG4191@2|Bacteria,COG4936@2|Bacteria,1RCM9@1224|Proteobacteria,42MC4@68525|delta/epsilon subdivisions,2WIZU@28221|Deltaproteobacteria 28221|Deltaproteobacteria T Histidine kinase A domain protein - - - - - - - - - - - - GAF,HATPase_c,HisKA,PAS_3,PAS_4,PAS_9,PocR,Response_reg,dCache_1,sCache_2 YYD2_k127_6360889_1 926569.ANT_05390 2.02e-125 409.0 COG1240@1|root,COG1240@2|Bacteria,2G7UF@200795|Chloroflexi 200795|Chloroflexi H von Willebrand factor (vWF) type A domain - - - - - - - - - - - - VWA_2 YYD2_k127_6360889_0 926550.CLDAP_23640 8.496e-133 438.0 COG1239@1|root,COG1239@2|Bacteria,2G5WJ@200795|Chloroflexi 200795|Chloroflexi H introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX - - 6.6.1.1 ko:K03404,ko:K03405 ko00860,ko01100,ko01110,map00860,map01100,map01110 - R03877 RC01012 ko00000,ko00001,ko01000 - - - AAA_5,Mg_chelatase,VWA_2 YYD2_k127_6360889_2 926569.ANT_30410 2.332e-115 379.0 COG0539@1|root,COG0539@2|Bacteria,2G656@200795|Chloroflexi 200795|Chloroflexi J PFAM RNA binding S1 domain protein - - - ko:K02945 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - S1 YYD2_k127_6384455_0 1128421.JAGA01000002_gene1289 1.723e-126 420.0 COG0015@1|root,COG0015@2|Bacteria 2|Bacteria F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily purB GO:0003674,GO:0003824,GO:0004018,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 4.3.2.2 ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048,M00049 R01083,R04559 RC00379,RC00444,RC00445 ko00000,ko00001,ko00002,ko01000 - - iAF1260.b1131,iBWG_1329.BWG_0979,iE2348C_1286.E2348C_1272,iEC042_1314.EC042_1202,iECABU_c1320.ECABU_c13450,iECDH10B_1368.ECDH10B_1203,iECP_1309.ECP_1126,iECUMN_1333.ECUMN_1375,iETEC_1333.ETEC_1255,iEcHS_1320.EcHS_A1251,iEcolC_1368.EcolC_2472,iJO1366.b1131,iJR904.b1131,iLF82_1304.LF82_1774,iNRG857_1313.NRG857_05460,iY75_1357.Y75_RS05905,ic_1306.c1510 ASL_C,Lyase_1 YYD2_k127_6384455_1 383372.Rcas_3272 1.561e-115 388.0 COG2379@1|root,COG2379@2|Bacteria,2G5RZ@200795|Chloroflexi,374XG@32061|Chloroflexia 32061|Chloroflexia C PFAM MOFRL domain protein - - 2.7.1.165 ko:K11529 ko00030,ko00260,ko00561,ko00630,ko00680,ko01100,ko01120,ko01130,ko01200,map00030,map00260,map00561,map00630,map00680,map01100,map01120,map01130,map01200 M00346 R08572 RC00002,RC00428 ko00000,ko00001,ko00002,ko01000 - - - DUF4147,MOFRL YYD2_k127_6384455_2 926569.ANT_30350 8.475e-30 126.0 COG0745@1|root,COG0745@2|Bacteria 926569.ANT_30350|- T phosphorelay signal transduction system - - - - - - - - - - - - - YYD2_k127_6384455_3 1173029.JH980292_gene4057 8.37e-10 64.0 28MCN@1|root,2ZAQR@2|Bacteria,1G1C5@1117|Cyanobacteria,1H8NJ@1150|Oscillatoriales 1117|Cyanobacteria - - - - - - - - - - - - - - - YYD2_k127_640552_2 644282.Deba_0628 8.766e-11 72.0 2C16S@1|root,2ZHJB@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - YYD2_k127_640552_4 644282.Deba_0628 2.933e-05 56.0 2C16S@1|root,2ZHJB@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - YYD2_k127_640552_0 926569.ANT_18520 3.875e-80 273.0 COG0170@1|root,COG0170@2|Bacteria 2|Bacteria I dolichyl monophosphate biosynthetic process - - - - - - - - - - - - - YYD2_k127_640552_5 1316408.HSISM1_70 0.0003668 53.0 COG3583@1|root,COG3664@1|root,COG3669@1|root,COG3583@2|Bacteria,COG3664@2|Bacteria,COG3669@2|Bacteria,1TSG7@1239|Firmicutes,4HK56@91061|Bacilli 91061|Bacilli G Signal peptide protein, YSIRK family fucA - 3.2.1.51 ko:K01206 ko00511,map00511 - - - ko00000,ko00001,ko01000,ko04147 - GH29 - Alpha_L_fucos,Calx-beta,F5_F8_type_C,G5,Gram_pos_anchor,Trypsin_2,YSIRK_signal YYD2_k127_640552_3 1278073.MYSTI_06441 6.852e-08 66.0 COG4932@1|root,COG4932@2|Bacteria,1QUEG@1224|Proteobacteria,438GF@68525|delta/epsilon subdivisions,2X3RA@28221|Deltaproteobacteria,2YWWZ@29|Myxococcales 28221|Deltaproteobacteria M Bacterial Ig-like domain (group 1) - - - - - - - - - - - - Big_1,LTD YYD2_k127_640552_1 1297742.A176_05385 2.908e-11 77.0 COG4932@1|root,COG4932@2|Bacteria,1QUEG@1224|Proteobacteria,438GF@68525|delta/epsilon subdivisions,2X3RA@28221|Deltaproteobacteria,2YWWZ@29|Myxococcales 28221|Deltaproteobacteria M Bacterial Ig-like domain (group 1) - - - - - - - - - - - - Big_1,LTD YYD2_k127_6429441_0 326427.Cagg_2500 2.745e-188 598.0 COG1027@1|root,COG1027@2|Bacteria,2G5IV@200795|Chloroflexi,37644@32061|Chloroflexia 32061|Chloroflexia C PFAM fumarate lyase - - 4.2.1.2 ko:K01679 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211 M00009,M00011,M00173,M00376 R01082 RC00443 ko00000,ko00001,ko00002,ko01000 - - - FumaraseC_C,Lyase_1 YYD2_k127_6429441_1 383372.Rcas_2157 2.057e-61 218.0 COG0180@1|root,COG0180@2|Bacteria,2G6CG@200795|Chloroflexi,3766S@32061|Chloroflexia 32061|Chloroflexia J tRNA synthetases class I (W and Y) trpS - 6.1.1.2 ko:K01867 ko00970,map00970 M00359,M00360 R03664 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_1b YYD2_k127_646117_3 926569.ANT_19920 1.76e-27 116.0 COG0750@1|root,COG0750@2|Bacteria,2G6GY@200795|Chloroflexi 200795|Chloroflexi M SMART PDZ DHR GLGF domain protein - - - ko:K11749 ko02024,ko04112,map02024,map04112 - - - ko00000,ko00001,ko01000,ko01002 - - - PDZ_2,Peptidase_M50 YYD2_k127_646117_1 926569.ANT_19930 1.848e-76 269.0 COG1413@1|root,COG1413@2|Bacteria,2G6MW@200795|Chloroflexi 200795|Chloroflexi C PBS lyase HEAT domain protein repeat-containing protein - - - - - - - - - - - - HEAT_2 YYD2_k127_646117_2 926550.CLDAP_05630 1.601e-44 173.0 COG0679@1|root,COG0679@2|Bacteria,2G90G@200795|Chloroflexi 200795|Chloroflexi S PFAM Auxin Efflux Carrier - - - ko:K07088 - - - - ko00000 - - - Mem_trans YYD2_k127_646117_4 383372.Rcas_0240 1.188e-18 88.0 COG1254@1|root,COG1254@2|Bacteria,2G7CV@200795|Chloroflexi,375T9@32061|Chloroflexia 32061|Chloroflexia C PFAM acylphosphatase acyP GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 - R00317,R01421,R01515 RC00043 ko00000,ko00001,ko01000 - - - Acylphosphatase YYD2_k127_646117_0 926569.ANT_14010 1.554e-88 297.0 COG2003@1|root,COG2003@2|Bacteria,2G6BK@200795|Chloroflexi 200795|Chloroflexi L Belongs to the UPF0758 family - - - ko:K03630 - - - - ko00000 - - - RadC YYD2_k127_655648_0 1463901.JOIY01000074_gene564 2.184e-12 76.0 COG1228@1|root,COG4946@1|root,COG1228@2|Bacteria,COG4946@2|Bacteria,2I3FC@201174|Actinobacteria 201174|Actinobacteria Q WD40-like Beta Propeller Repeat - - - - - - - - - - - - Amidohydro_1,PD40 YYD2_k127_670641_6 309801.trd_1743 8.9e-44 174.0 COG4927@1|root,COG4927@2|Bacteria,2GA59@200795|Chloroflexi,27ZAW@189775|Thermomicrobia 189775|Thermomicrobia S Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase - - - - - - - - - - - - AAT YYD2_k127_670641_1 1250232.JQNJ01000001_gene172 8.854e-74 257.0 COG0053@1|root,COG0053@2|Bacteria,4NJRM@976|Bacteroidetes,1HXI5@117743|Flavobacteriia 976|Bacteroidetes P Cation efflux family - - - - - - - - - - - - Cation_efflux YYD2_k127_670641_7 324602.Caur_0618 1.658e-07 55.0 COG1943@1|root,COG1943@2|Bacteria 2|Bacteria L Transposase - - - - - - - - - - - - Y1_Tnp YYD2_k127_670641_2 383372.Rcas_2873 2.404e-58 225.0 COG1361@1|root,COG3210@1|root,COG1361@2|Bacteria,COG3210@2|Bacteria,2G8VW@200795|Chloroflexi,377DU@32061|Chloroflexia 2|Bacteria M TIGRFAM polymorphic outer membrane protein - - - ko:K21449 - - - - ko00000,ko02000 1.B.40.2 - - Beta_helix,DUF11,Sigma70_r2,zf-HC2 YYD2_k127_670641_5 926569.ANT_13190 3.259e-49 183.0 COG1057@1|root,COG1057@2|Bacteria,2G6MY@200795|Chloroflexi 200795|Chloroflexi F Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) nadD - 2.7.7.18 ko:K00969 ko00760,ko01100,map00760,map01100 M00115 R00137,R03005 RC00002 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_like YYD2_k127_670641_3 485913.Krac_10314 1.129e-54 204.0 COG1718@1|root,COG1718@2|Bacteria 2|Bacteria DT cellular response to dsDNA IV02_22125 - 2.7.11.1 ko:K07178 ko03008,map03008 - - - ko00000,ko00001,ko01000,ko01001,ko03009 - - - RIO1 YYD2_k127_670641_4 1238182.C882_2587 1.62e-54 202.0 COG2206@1|root,COG3437@1|root,COG2206@2|Bacteria,COG3437@2|Bacteria,1MV37@1224|Proteobacteria,2U0PD@28211|Alphaproteobacteria,2JPZE@204441|Rhodospirillales 204441|Rhodospirillales T HD domain - - - - - - - - - - - - GAF,GAF_2,HD_5 YYD2_k127_670641_8 1173028.ANKO01000094_gene2570 1.194e-05 56.0 COG5000@1|root,COG5000@2|Bacteria 2|Bacteria T phosphorelay sensor kinase activity - - 2.7.13.3 ko:K03406,ko:K07675,ko:K13598 ko02020,ko02030,map02020,map02030 M00473,M00498 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035 - - - 4HB_MCP_1,HAMP,HATPase_c,HisKA,MCPsignal,PAS,PAS_4,PAS_9,dCache_1 YYD2_k127_670641_0 179408.Osc7112_4771 6.714e-134 439.0 COG2114@1|root,COG2114@2|Bacteria,1G335@1117|Cyanobacteria,1H8VG@1150|Oscillatoriales 1117|Cyanobacteria T Adenylyl- / guanylyl cyclase, catalytic domain - - - - - - - - - - - - Guanylate_cyc YYD2_k127_707284_1 485913.Krac_5249 5.723e-72 249.0 COG2197@1|root,COG2197@2|Bacteria,2G8M7@200795|Chloroflexi 200795|Chloroflexi K COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - - - - - - - - - - GerE,Response_reg YYD2_k127_707284_2 44251.PDUR_10750 1.572e-57 218.0 COG4585@1|root,COG4585@2|Bacteria,1UYVE@1239|Firmicutes,4HGNS@91061|Bacilli,26U39@186822|Paenibacillaceae 91061|Bacilli T signal transduction histidine kinase ydfH - 2.7.13.3 ko:K11623 ko02020,map02020 M00484 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HATPase_c,HisKA_3 YYD2_k127_707284_0 1304284.L21TH_2398 8.686e-100 334.0 COG1131@1|root,COG1131@2|Bacteria,1TPMQ@1239|Firmicutes,248QD@186801|Clostridia,36DTX@31979|Clostridiaceae 186801|Clostridia V ABC transporter - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran YYD2_k127_707284_4 298655.KI912266_gene1941 2.834e-15 88.0 COG0842@1|root,COG0842@2|Bacteria 2|Bacteria V Transport permease protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 YYD2_k127_707284_3 316274.Haur_1889 1.027e-39 163.0 COG0842@1|root,COG0842@2|Bacteria,2G8VC@200795|Chloroflexi 200795|Chloroflexi V ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 YYD2_k127_70981_2 926569.ANT_23650 9.496e-51 192.0 COG1305@1|root,COG1305@2|Bacteria,2G66M@200795|Chloroflexi 200795|Chloroflexi E PFAM transglutaminase domain protein - - - - - - - - - - - - DUF4129,Transglut_core YYD2_k127_70981_0 926569.ANT_23640 4.686e-179 577.0 COG2114@1|root,COG2203@1|root,COG5002@1|root,COG2114@2|Bacteria,COG2203@2|Bacteria,COG5002@2|Bacteria,2G6X8@200795|Chloroflexi 200795|Chloroflexi T adenylyl cyclase class-3 4 guanylyl cyclase - - 4.6.1.1 ko:K01768 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000 - - - FHA,GAF_2,GAF_3,Guanylate_cyc,PAS YYD2_k127_70981_1 383372.Rcas_2935 7.6e-117 392.0 COG0793@1|root,COG0793@2|Bacteria,2G7PQ@200795|Chloroflexi 200795|Chloroflexi M Peptidase family S41 - - - - - - - - - - - - Peptidase_S41 YYD2_k127_749104_2 926569.ANT_00490 2.998e-55 199.0 COG0433@1|root,COG0433@2|Bacteria,2G62A@200795|Chloroflexi 200795|Chloroflexi S Domain of unknown function DUF87 - - - ko:K06915 - - - - ko00000 - - - DUF87,HAS-barrel YYD2_k127_749104_3 1173024.KI912149_gene5660 4.049e-37 143.0 COG0614@1|root,COG0614@2|Bacteria,1G71C@1117|Cyanobacteria 1117|Cyanobacteria P PD-(D/E)XK nuclease superfamily - - - - - - - - - - - - PDDEXK_3 YYD2_k127_749104_0 926569.ANT_30470 4.299e-72 259.0 COG1630@1|root,COG1630@2|Bacteria,2G68Z@200795|Chloroflexi 200795|Chloroflexi S NurA - - - - - - - - - - - - NurA YYD2_k127_762402_14 1122173.AXVL01000004_gene896 6.595e-09 66.0 COG0741@1|root,COG0741@2|Bacteria,37B1U@32066|Fusobacteria 32066|Fusobacteria M Transglycosylase SLT domain - - - - - - - - - - - - SLT YYD2_k127_762402_3 926569.ANT_28730 1.802e-130 430.0 COG2770@1|root,COG5002@1|root,COG2770@2|Bacteria,COG5002@2|Bacteria,2G68T@200795|Chloroflexi 200795|Chloroflexi T histidine kinase HAMP region domain protein - - - - - - - - - - - - HAMP,HATPase_c,HisKA YYD2_k127_762402_6 926550.CLDAP_04400 1.575e-90 305.0 COG0745@1|root,COG0745@2|Bacteria,2G5TG@200795|Chloroflexi 200795|Chloroflexi K Two component transcriptional regulator, winged helix family - - - ko:K07669 ko02020,map02020 M00460 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C YYD2_k127_762402_13 264732.Moth_1992 3.095e-19 93.0 28WAT@1|root,2ZIB9@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - YYD2_k127_762402_15 665571.STHERM_c14960 0.0002915 50.0 28WAT@1|root,2ZIB9@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - YYD2_k127_762402_12 330214.NIDE3890 2.664e-29 123.0 COG0723@1|root,COG0723@2|Bacteria,3J0TT@40117|Nitrospirae 40117|Nitrospirae C Rieske [2Fe-2S] domain - - 1.10.9.1 ko:K02636,ko:K03886 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00151,M00162 R03817,R08409 RC01002 ko00000,ko00001,ko00002,ko00194,ko01000 - - - Rieske YYD2_k127_762402_9 323261.Noc_1152 2.085e-75 254.0 COG0432@1|root,COG0432@2|Bacteria,1RA5G@1224|Proteobacteria,1S3N1@1236|Gammaproteobacteria,1X23J@135613|Chromatiales 135613|Chromatiales S Uncharacterised protein family UPF0047 - - - - - - - - - - - - UPF0047 YYD2_k127_762402_8 1499967.BAYZ01000013_gene6463 4.297e-77 269.0 COG0667@1|root,COG0667@2|Bacteria 2|Bacteria C Aldo Keto reductase - - - ko:K07079 - - - - ko00000 - - - Aldo_ket_red YYD2_k127_762402_10 324602.Caur_0188 6.222e-69 237.0 COG0693@1|root,COG0693@2|Bacteria,2GAQG@200795|Chloroflexi,375Y9@32061|Chloroflexia 32061|Chloroflexia S PFAM ThiJ PfpI domain protein - - 3.5.1.124 ko:K05520 - - - - ko00000,ko01000,ko01002 - - - DJ-1_PfpI YYD2_k127_762402_2 383372.Rcas_1237 3.003e-131 427.0 COG3842@1|root,COG3842@2|Bacteria,2G5JJ@200795|Chloroflexi,37726@32061|Chloroflexia 32061|Chloroflexia P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system - - - ko:K02052 ko02024,map02024 M00193 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11 - - ABC_tran,TOBE_2 YYD2_k127_762402_7 511051.CSE_14420 7.496e-90 304.0 COG1177@1|root,COG1177@2|Bacteria 2|Bacteria P DNA import into cell involved in transformation - - - ko:K02053 ko02024,map02024 M00193 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11 - - BPD_transp_1 YYD2_k127_762402_4 926569.ANT_31320 2.961e-112 370.0 COG4132@1|root,COG4132@2|Bacteria,2G69Y@200795|Chloroflexi 200795|Chloroflexi P PFAM binding-protein-dependent transport systems inner membrane component - - - ko:K02054 ko02024,map02024 M00193 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11 - - BPD_transp_1 YYD2_k127_762402_1 511051.CSE_14440 2.372e-131 429.0 COG1840@1|root,COG1840@2|Bacteria 2|Bacteria P iron ion homeostasis - - - ko:K02055 ko02024,map02024 M00193 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11 - - SBP_bac_6 YYD2_k127_762402_0 1128421.JAGA01000003_gene3664 7.756e-163 533.0 COG0531@1|root,COG0531@2|Bacteria 2|Bacteria E amino acid steT - - ko:K03294 - - - - ko00000 2.A.3.2 - - AA_permease,AA_permease_2 YYD2_k127_762402_5 266117.Rxyl_0772 2.586e-109 362.0 COG2129@1|root,COG2129@2|Bacteria,2IJW1@201174|Actinobacteria,4CQ37@84995|Rubrobacteria 84995|Rubrobacteria S metallophosphoesterase - - - - - - - - - - - - - YYD2_k127_765371_4 383372.Rcas_0521 4.138e-77 261.0 COG2723@1|root,COG2723@2|Bacteria,2G67P@200795|Chloroflexi,3764G@32061|Chloroflexia 32061|Chloroflexia G PFAM glycoside hydrolase, family 1 - - 3.2.1.21 ko:K05350 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - - - Glyco_hydro_1 YYD2_k127_765371_3 452637.Oter_1750 1.186e-78 276.0 COG0395@1|root,COG0395@2|Bacteria,46TIW@74201|Verrucomicrobia,3K8AG@414999|Opitutae 414999|Opitutae P Binding-protein-dependent transport system inner membrane component - - - ko:K02026 - M00207 - - ko00000,ko00002,ko02000 3.A.1.1 - - BPD_transp_1 YYD2_k127_765371_1 697281.Mahau_2566 5.697e-106 354.0 COG1175@1|root,COG1175@2|Bacteria,1TPTZ@1239|Firmicutes,2492R@186801|Clostridia,42FXR@68295|Thermoanaerobacterales 186801|Clostridia P PFAM binding-protein-dependent transport systems inner membrane component - - - ko:K02025 - M00207 - - ko00000,ko00002,ko02000 3.A.1.1 - - BPD_transp_1 YYD2_k127_765371_5 1121346.KB899854_gene87 1.211e-50 196.0 COG2182@1|root,COG2182@2|Bacteria,1UI6V@1239|Firmicutes,4ISFX@91061|Bacilli,274KA@186822|Paenibacillaceae 91061|Bacilli G ABC transporter substrate-binding protein - - - - - - - - - - - - SBP_bac_1,SBP_bac_8 YYD2_k127_765371_2 926550.CLDAP_13320 3.136e-98 331.0 COG1609@1|root,COG1609@2|Bacteria,2G7SU@200795|Chloroflexi 200795|Chloroflexi K helix_turn _helix lactose operon repressor - - - ko:K02529 - - - - ko00000,ko03000 - - - LacI,Peripla_BP_3 YYD2_k127_765371_0 1047013.AQSP01000070_gene34 1.199e-174 572.0 COG3292@1|root,COG3920@1|root,COG3292@2|Bacteria,COG3920@2|Bacteria,2NNZT@2323|unclassified Bacteria 2|Bacteria T Two component regulator propeller pdtaS - 2.7.13.3 ko:K00936 - M00839 - - ko00000,ko00002,ko01000,ko01001,ko02022 - - - HATPase_c,HATPase_c_2,H_kinase_N,HisKA_2,Reg_prop,Y_Y_Y YYD2_k127_81643_3 644966.Tmar_2131 9.482e-37 143.0 COG1024@1|root,COG1024@2|Bacteria,1TQ2V@1239|Firmicutes,24HM8@186801|Clostridia,3WDT7@538999|Clostridiales incertae sedis 186801|Clostridia I Belongs to the enoyl-CoA hydratase isomerase family - - 5.3.3.18 ko:K15866 ko00360,ko01120,map00360,map01120 - R09837,R09839 RC00004,RC00326,RC02689,RC03003 ko00000,ko00001,ko01000 - - - ECH_1 YYD2_k127_81643_5 867903.ThesuDRAFT_00714 5.765e-08 59.0 COG3224@1|root,COG3224@2|Bacteria,1V83H@1239|Firmicutes 1239|Firmicutes S Ethyl tert-butyl ether degradation ethD - - - - - - - - - - - EthD YYD2_k127_81643_2 1329516.JPST01000008_gene2000 6.332e-92 313.0 COG0167@1|root,COG0167@2|Bacteria,1TPFV@1239|Firmicutes,4HBKN@91061|Bacilli,27BB8@186824|Thermoactinomycetaceae 91061|Bacilli F Dihydroorotate dehydrogenase pyrD - 1.3.5.2,1.3.98.1 ko:K00226,ko:K00254 ko00240,ko01100,map00240,map01100 M00051 R01867,R01868 RC00051 ko00000,ko00001,ko00002,ko01000 - - - DHO_dh YYD2_k127_81643_1 926569.ANT_15870 4.879e-93 316.0 COG1287@1|root,COG1287@2|Bacteria 2|Bacteria S oligosaccharyl transferase activity - - 2.4.99.18 ko:K07151 ko00510,ko00513,ko01100,ko04141,map00510,map00513,map01100,map04141 M00072 R04216,R05976 RC00005,RC00482 ko00000,ko00001,ko00002,ko01000,ko01003 - GT66 - PMT_2 YYD2_k127_864510_0 926569.ANT_22650 2.51e-102 349.0 COG0642@1|root,COG2205@2|Bacteria,2GBIY@200795|Chloroflexi 200795|Chloroflexi T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - - - - - - - - - - HAMP,HATPase_c,HisKA YYD2_k127_864510_3 1150599.MPHLEI_04445 0.0002364 52.0 COG1846@1|root,COG1846@2|Bacteria,2GMDI@201174|Actinobacteria,233QA@1762|Mycobacteriaceae 201174|Actinobacteria K Transcriptional regulator - - - - - - - - - - - - - YYD2_k127_864510_1 926569.ANT_22660 1.067e-91 306.0 COG0745@1|root,COG0745@2|Bacteria,2G8CC@200795|Chloroflexi 200795|Chloroflexi K Transcriptional regulatory protein, C terminal - - - ko:K07658 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C YYD2_k127_864510_2 340099.Teth39_0866 4.337e-42 161.0 COG0251@1|root,COG0251@2|Bacteria,1V6HG@1239|Firmicutes,24J8Y@186801|Clostridia,42GJ3@68295|Thermoanaerobacterales 186801|Clostridia J PFAM Endoribonuclease L-PSP yjgF - 3.5.99.10 ko:K09022 - - R11098,R11099 RC03275,RC03354 ko00000,ko01000 - - - Ribonuc_L-PSP YYD2_k127_867556_8 926569.ANT_31250 1.866e-38 146.0 COG0474@1|root,COG0474@2|Bacteria,2G5ZS@200795|Chloroflexi 200795|Chloroflexi P TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC - - 3.6.3.8 ko:K01537 - - - - ko00000,ko01000 3.A.3.2 - - Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase YYD2_k127_867556_2 706587.Desti_1075 2.16e-156 501.0 COG0474@1|root,COG0474@2|Bacteria,1MUU5@1224|Proteobacteria,42M8F@68525|delta/epsilon subdivisions,2WIU0@28221|Deltaproteobacteria 28221|Deltaproteobacteria P ATPase, P-type (transporting), HAD superfamily, subfamily IC - - 3.6.3.8 ko:K01537 - - - - ko00000,ko01000 3.A.3.2 - - Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase YYD2_k127_867556_1 1121920.AUAU01000004_gene599 6.389e-265 830.0 COG0330@1|root,COG0330@2|Bacteria 2|Bacteria O stress-induced mitochondrial fusion - - - - - - - - - - - - Band_7 YYD2_k127_867556_3 926569.ANT_10890 4.447e-90 299.0 COG2316@1|root,COG2316@2|Bacteria,2G6T2@200795|Chloroflexi 200795|Chloroflexi S TIGRFAM metal dependent phophohydrolase - - - - - - - - - - - - HD YYD2_k127_867556_4 926569.ANT_10900 3.037e-74 255.0 COG2949@1|root,COG2949@2|Bacteria,2G6VI@200795|Chloroflexi 200795|Chloroflexi S DUF218 domain - - - - - - - - - - - - DUF218 YYD2_k127_867556_5 926569.ANT_04330 1.81e-54 201.0 COG0344@1|root,COG0344@2|Bacteria 2|Bacteria I acyl-phosphate glycerol-3-phosphate acyltransferase activity plsY - 2.3.1.15 ko:K08591 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R00851,R09380 RC00004,RC00039,RC00041 ko00000,ko00001,ko00002,ko01000,ko01004 - - - G3P_acyltransf YYD2_k127_867556_0 926569.ANT_04370 0.0 1063.0 COG0187@1|root,COG0187@2|Bacteria,2G67C@200795|Chloroflexi 200795|Chloroflexi L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner gyrB - 5.99.1.3 ko:K02470 - - - - ko00000,ko01000,ko03032,ko03400 - - - DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim YYD2_k127_867556_11 1220589.CD32_22220 4.34e-15 87.0 COG0604@1|root,COG0604@2|Bacteria,1TT5J@1239|Firmicutes,4HCXG@91061|Bacilli,3IWSQ@400634|Lysinibacillus 91061|Bacilli C alcohol dehydrogenase - - - - - - - - - - - - - YYD2_k127_867556_10 316274.Haur_2527 7.26e-31 125.0 COG1695@1|root,COG1695@2|Bacteria 2|Bacteria K negative regulation of transcription, DNA-templated - - - ko:K10947 - - - - ko00000,ko03000 - - - PadR YYD2_k127_867556_9 926569.ANT_25700 3.273e-32 139.0 COG0265@1|root,COG0642@1|root,COG2203@1|root,COG0265@2|Bacteria,COG2203@2|Bacteria,COG2205@2|Bacteria,2G7SE@200795|Chloroflexi 200795|Chloroflexi T histidine kinase A domain protein - - - - - - - - - - - - GAF_2,HATPase_c,HisKA YYD2_k127_883906_4 509191.AEDB02000081_gene2489 2.226e-28 120.0 COG3708@1|root,COG3708@2|Bacteria,1V2UA@1239|Firmicutes,24GER@186801|Clostridia,3WKGA@541000|Ruminococcaceae 186801|Clostridia K Protein of unknown function (DUF3788) - - - - - - - - - - - - DUF3788,DUF3795 YYD2_k127_883906_2 479434.Sthe_3188 5.379e-56 201.0 29KMP@1|root,307IZ@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - DUF4287 YYD2_k127_883906_3 1312959.KI914656_gene787 1.123e-35 147.0 COG2364@1|root,COG2364@2|Bacteria,2GKA1@201174|Actinobacteria 201174|Actinobacteria S membrane - - - ko:K07149 - - - - ko00000 - - - - YYD2_k127_883906_5 1243664.CAVL020000026_gene1150 9.634e-13 76.0 COG0671@1|root,COG0671@2|Bacteria,1VCXV@1239|Firmicutes,4IR2R@91061|Bacilli,1ZG11@1386|Bacillus 91061|Bacilli I PAP2 superfamily - - - - - - - - - - - - PAP2_3 YYD2_k127_883906_0 1163617.SCD_n02069 1.984e-140 456.0 COG1092@1|root,COG1092@2|Bacteria,1MUGB@1224|Proteobacteria,2VKNG@28216|Betaproteobacteria 28216|Betaproteobacteria J SMART PUA domain containing protein rlmI - 2.1.1.191 ko:K06969 - - - - ko00000,ko01000,ko03009 - - - Methyltrans_SAM YYD2_k127_883906_1 485913.Krac_11884 2.379e-108 364.0 COG3214@1|root,COG3214@2|Bacteria,2G82W@200795|Chloroflexi 200795|Chloroflexi S Winged helix DNA-binding domain - - - ko:K09927 - - - - ko00000 - - - HTH_42 YYD2_k127_886550_2 2880.D8LJU0 3.414e-60 214.0 COG0461@1|root,KOG1377@2759|Eukaryota 2759|Eukaryota F 'de novo' UMP biosynthetic process URA5 GO:0003674,GO:0003824,GO:0004588,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006213,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019856,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046131,GO:0046132,GO:0046134,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.1.1.202,2.4.2.10,4.1.1.23 ko:K00762,ko:K01591,ko:K13421,ko:K15334 ko00240,ko00983,ko01100,map00240,map00983,map01100 M00051 R00965,R01870,R08231 RC00063,RC00409,RC00611 ko00000,ko00001,ko00002,ko01000,ko03016 - - - OMPdecase,Pribosyltran YYD2_k127_886550_1 5693.XP_811898.1 2.953e-63 223.0 COG0461@1|root,KOG1377@2759|Eukaryota,3XSWC@5653|Kinetoplastida 5653|Kinetoplastida F Orotidine-5-phosphate decarboxylase orotate phosphoribosyltransferase - - 2.4.2.10,4.1.1.23 ko:K01591,ko:K13421 ko00240,ko00983,ko01100,map00240,map00983,map01100 M00051 R00965,R01870,R08231 RC00063,RC00409,RC00611 ko00000,ko00001,ko00002,ko01000 - - - OMPdecase,Pribosyltran YYD2_k127_886550_4 1048339.KB913029_gene1626 1.183e-05 49.0 COG1051@1|root,COG1051@2|Bacteria,2I8YY@201174|Actinobacteria,4ET41@85013|Frankiales 201174|Actinobacteria F Belongs to the Nudix hydrolase family - - - - - - - - - - - - NUDIX YYD2_k127_886550_3 929562.Emtol_2413 4.122e-37 147.0 COG4430@1|root,COG4430@2|Bacteria,4NR0U@976|Bacteroidetes,47PZ9@768503|Cytophagia 976|Bacteroidetes S Domain of unknown function (DUF1905) - - - - - - - - - - - - DUF1905,OmdA YYD2_k127_886550_0 926569.ANT_15870 5.938e-104 354.0 COG1287@1|root,COG1287@2|Bacteria 2|Bacteria S oligosaccharyl transferase activity - - 2.4.99.18 ko:K07151 ko00510,ko00513,ko01100,ko04141,map00510,map00513,map01100,map04141 M00072 R04216,R05976 RC00005,RC00482 ko00000,ko00001,ko00002,ko01000,ko01003 - GT66 - PMT_2 YYD2_k127_902729_3 1123504.JQKD01000030_gene4596 1.774e-52 191.0 COG2020@1|root,COG2020@2|Bacteria,1N3YJ@1224|Proteobacteria,2VT4V@28216|Betaproteobacteria,4AFU0@80864|Comamonadaceae 28216|Betaproteobacteria O Ergosterol biosynthesis ERG4/ERG24 family - - - - - - - - - - - - PEMT YYD2_k127_902729_5 1042375.AFPL01000036_gene3040 5.295e-33 130.0 COG0011@1|root,COG0011@2|Bacteria,1N1NM@1224|Proteobacteria,1SAV8@1236|Gammaproteobacteria,46B5F@72275|Alteromonadaceae 1236|Gammaproteobacteria S Thiamine-binding protein - - - - - - - - - - - - Thiamine_BP YYD2_k127_902729_1 926569.ANT_19840 4.852e-104 340.0 COG0035@1|root,COG0035@2|Bacteria,2G6CS@200795|Chloroflexi 200795|Chloroflexi F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate upp - 2.4.2.9 ko:K00761 ko00240,ko01100,map00240,map01100 - R00966 RC00063 ko00000,ko00001,ko01000 - - - UPRTase YYD2_k127_902729_0 485916.Dtox_1611 3.224e-113 372.0 COG0535@1|root,COG0535@2|Bacteria,1URM8@1239|Firmicutes,24XB8@186801|Clostridia 186801|Clostridia C 4Fe-4S single cluster domain - - - - - - - - - - - - Fer4_12,Radical_SAM,SPASM YYD2_k127_902729_4 469371.Tbis_1166 9.862e-37 148.0 COG1309@1|root,COG1309@2|Bacteria,2GMCG@201174|Actinobacteria,4E2RD@85010|Pseudonocardiales 201174|Actinobacteria K PFAM Bacterial regulatory proteins, tetR family - - - - - - - - - - - - TetR_N YYD2_k127_902729_2 1158294.JOMI01000009_gene906 1.721e-74 261.0 COG0348@1|root,COG0348@2|Bacteria,4NHSX@976|Bacteroidetes 976|Bacteroidetes C 4Fe-4S binding domain protein - - - - - - - - - - - - Fer4_5,Fer4_9 YYD2_k127_902729_6 391623.TERMP_00012 0.0004623 46.0 COG0383@1|root,arCOG03661@2157|Archaea 2157|Archaea G PFAM Glycoside hydrolase, family 38 - - 3.2.1.24 ko:K01191 ko00511,map00511 - - - ko00000,ko00001,ko01000,ko04131 - GH38 - Alpha-mann_mid,Glyco_hydro_38,Glyco_hydro_38C YYD2_k127_918932_2 178306.PAE3607 7.089e-13 77.0 arCOG07069@1|root,arCOG07069@2157|Archaea 2157|Archaea - - - - - - - - - - - - - - - YYD2_k127_918932_1 555088.DealDRAFT_1165 1.378e-18 94.0 COG0664@1|root,COG0664@2|Bacteria,1V8FC@1239|Firmicutes,25MZJ@186801|Clostridia,42KUQ@68298|Syntrophomonadaceae 186801|Clostridia K Cyclic nucleotide-monophosphate binding domain - - - ko:K09766 - - - - ko00000 - - - HTH_Crp_2,cNMP_binding YYD2_k127_918932_0 926550.CLDAP_31520 3.172e-60 212.0 COG0019@1|root,COG0019@2|Bacteria,2G5RR@200795|Chloroflexi 200795|Chloroflexi E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine lysA - 4.1.1.20 ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R00451 RC00299 ko00000,ko00001,ko00002,ko01000 - - - Orn_Arg_deC_N,Orn_DAP_Arg_deC YYD2_k127_927999_12 511051.CSE_11940 1.102e-13 75.0 COG1894@1|root,COG1894@2|Bacteria 2|Bacteria C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain nqo1 - 1.12.1.3,1.6.5.3 ko:K00335,ko:K18331 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - 2Fe-2S_thioredx,Complex1_51K,NADH_4Fe-4S,SLBB YYD2_k127_927999_10 926569.ANT_17810 5.961e-49 180.0 COG1905@1|root,COG1905@2|Bacteria 2|Bacteria C 2 iron, 2 sulfur cluster binding nuoE GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 ko:K00334 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - 2Fe-2S_thioredx YYD2_k127_927999_11 926569.ANT_17790 1.21e-25 110.0 COG3411@1|root,COG3411@2|Bacteria 2|Bacteria C Ferredoxin - - 1.12.1.3,1.6.5.3 ko:K00335,ko:K17992 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - 2Fe-2S_thioredx,Complex1_51K,Fer4,NADH_4Fe-4S,SLBB YYD2_k127_927999_5 526222.Desal_1841 1.531e-73 253.0 COG2197@1|root,COG2197@2|Bacteria,1MWGM@1224|Proteobacteria,42Q40@68525|delta/epsilon subdivisions,2WKYI@28221|Deltaproteobacteria,2MA7Y@213115|Desulfovibrionales 28221|Deltaproteobacteria K response regulator, receiver - - - ko:K02479 - - - - ko00000,ko02022 - - - GerE,Response_reg YYD2_k127_927999_9 926569.ANT_12480 5.607e-50 200.0 COG2203@1|root,COG4585@1|root,COG2203@2|Bacteria,COG4585@2|Bacteria,2G6ZM@200795|Chloroflexi 200795|Chloroflexi T Histidine kinase - - - - - - - - - - - - GAF_2,HATPase_c,HisKA_3 YYD2_k127_927999_13 456442.Mboo_0333 2.262e-09 70.0 COG2202@1|root,arCOG06918@2157|Archaea 2157|Archaea T Pas domain - - - - - - - - - - - - PAS YYD2_k127_927999_8 1123487.KB892864_gene2143 1.223e-53 198.0 COG1142@1|root,COG1142@2|Bacteria,1MWE1@1224|Proteobacteria,2VJ9U@28216|Betaproteobacteria,2KW51@206389|Rhodocyclales 206389|Rhodocyclales C 4Fe-4S ferredoxin, iron-sulfur binding - - - - - - - - - - - - Fer4,Fer4_11 YYD2_k127_927999_1 264732.Moth_2191 1.08e-181 590.0 COG0651@1|root,COG0651@2|Bacteria,1TREH@1239|Firmicutes,248TK@186801|Clostridia,42EV9@68295|Thermoanaerobacterales 186801|Clostridia CP NADH Ubiquinone plastoquinone (Complex I) hyfB - 1.6.5.3 ko:K00342,ko:K05568,ko:K12137 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000,ko02000 2.A.63.1,2.A.63.2,3.D.1 - - Proton_antipo_M,Proton_antipo_N YYD2_k127_927999_4 264732.Moth_2190 8.99e-97 328.0 COG0650@1|root,COG0650@2|Bacteria,1UERZ@1239|Firmicutes,24ARH@186801|Clostridia,42FZ3@68295|Thermoanaerobacterales 186801|Clostridia C NADH dehydrogenase - - - ko:K12138 - - - - ko00000,ko01000 - - - NADHdh YYD2_k127_927999_2 264732.Moth_2187 6.649e-173 554.0 COG1009@1|root,COG1009@2|Bacteria,1TQW4@1239|Firmicutes,24A16@186801|Clostridia,42FX8@68295|Thermoanaerobacterales 186801|Clostridia C NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus - - - ko:K12139 - - - - ko00000,ko01000 - - - Proton_antipo_M,Proton_antipo_N YYD2_k127_927999_6 1123487.KB892864_gene2147 5.924e-63 224.0 COG4237@1|root,COG4237@2|Bacteria,1NAT8@1224|Proteobacteria,2VJTI@28216|Betaproteobacteria,2KXNV@206389|Rhodocyclales 206389|Rhodocyclales C hydrogenase 4 membrane hyfE - - ko:K12140 - - - - ko00000,ko01000 - - - - YYD2_k127_927999_3 349965.yinte0001_23520 3.12e-171 551.0 COG0651@1|root,COG0651@2|Bacteria,1MVBA@1224|Proteobacteria,1RPB3@1236|Gammaproteobacteria,41EMI@629|Yersinia 1236|Gammaproteobacteria CP to Hydrogenase-4 component F of Bacteria UniRef RepID HYFF_ECOLI hyfF GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0033554,GO:0044425,GO:0044464,GO:0050896,GO:0051716,GO:0071944 - ko:K12141 - - - - ko00000,ko01000 - - iECIAI39_1322.ECIAI39_2625,iZ_1308.Z3746 Proton_antipo_M,Proton_antipo_N YYD2_k127_927999_0 264732.Moth_2186 3.437e-277 863.0 COG3261@1|root,COG3262@1|root,COG3261@2|Bacteria,COG3262@2|Bacteria,1VZGX@1239|Firmicutes,248UJ@186801|Clostridia,42EKZ@68295|Thermoanaerobacterales 186801|Clostridia C Nickel-dependent hydrogenase - - - ko:K15830 - - - - ko00000 - - - Complex1_30kDa,Complex1_49kDa,NiFeSe_Hases YYD2_k127_927999_7 264732.Moth_2185 2.282e-62 220.0 COG1143@1|root,COG1143@2|Bacteria,1UCGF@1239|Firmicutes,24HKT@186801|Clostridia,42GPS@68295|Thermoanaerobacterales 186801|Clostridia C 4Fe-4S dicluster domain - - - ko:K12143 - - - - ko00000 - - - Fer4,Fer4_7 YYD2_k127_937947_0 926569.ANT_01520 1.08e-158 503.0 COG0468@1|root,COG0468@2|Bacteria,2G5WE@200795|Chloroflexi 200795|Chloroflexi L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage recA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - ko:K03553 ko03440,map03440 M00729 - - ko00000,ko00001,ko00002,ko03400 - - - RecA YYD2_k127_937947_3 926569.ANT_23030 9.228e-103 348.0 COG0739@1|root,COG0739@2|Bacteria 2|Bacteria M heme binding - - - - - - - - - - - - APH,Aminotran_3,Peptidase_M23 YYD2_k127_937947_1 926569.ANT_23020 5.548e-154 506.0 COG0823@1|root,COG0823@2|Bacteria,2G8PZ@200795|Chloroflexi 200795|Chloroflexi U WD40 domain protein beta Propeller - - - ko:K03641 - - - - ko00000,ko02000 2.C.1.2 - - PD40 YYD2_k127_937947_5 1157490.EL26_14685 8.083e-14 81.0 COG1475@1|root,COG1475@2|Bacteria,1V8HN@1239|Firmicutes,4HJ7P@91061|Bacilli 91061|Bacilli K ParB-like nuclease domain - - - - - - - - - - - - ParBc YYD2_k127_937947_4 644966.Tmar_0143 4.674e-77 268.0 COG5322@1|root,COG5322@2|Bacteria,1TQ2E@1239|Firmicutes,24A1Y@186801|Clostridia 186801|Clostridia S oxidoreductase activity - - - - - - - - - - - - - YYD2_k127_937947_2 926569.ANT_19900 1.413e-133 434.0 COG0498@1|root,COG0498@2|Bacteria,2G5RK@200795|Chloroflexi 200795|Chloroflexi E PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit - - 4.2.3.1 ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 M00018 R01466,R05086 RC00017,RC00526 ko00000,ko00001,ko00002,ko01000 - - - PALP YYD2_k127_946474_4 883.DvMF_1360 7.673e-13 76.0 COG2204@1|root,COG2204@2|Bacteria,1MU0N@1224|Proteobacteria,42M03@68525|delta/epsilon subdivisions,2WJF9@28221|Deltaproteobacteria,2M8WX@213115|Desulfovibrionales 28221|Deltaproteobacteria T two component, sigma54 specific, transcriptional regulator, Fis family - - - - - - - - - - - - HTH_8,Response_reg,Sigma54_activat YYD2_k127_946474_1 357808.RoseRS_1088 3.96e-52 194.0 COG0745@1|root,COG0745@2|Bacteria,2G8W7@200795|Chloroflexi,375AC@32061|Chloroflexia 32061|Chloroflexia K Two component transcriptional regulator, winged helix family - - - - - - - - - - - - Response_reg,Trans_reg_C YYD2_k127_946474_2 357808.RoseRS_1897 7.478e-49 199.0 COG4191@1|root,COG4191@2|Bacteria,2GBJB@200795|Chloroflexi,375H4@32061|Chloroflexia 32061|Chloroflexia T histidine kinase A domain protein - - 2.7.13.3 ko:K02482 - - - - ko00000,ko01000,ko01001,ko02022 - - - GAF_2,HATPase_c,HisKA YYD2_k127_946474_0 926569.ANT_16100 1.485e-207 656.0 COG1418@1|root,COG4372@1|root,COG1418@2|Bacteria,COG4372@2|Bacteria,2G620@200795|Chloroflexi 200795|Chloroflexi S Endoribonuclease that initiates mRNA decay rny - - ko:K18682 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - DUF3552,HD,KH_1 YYD2_k127_946474_3 926569.ANT_16110 1.24e-40 158.0 COG2137@1|root,COG2137@2|Bacteria,2G6WA@200795|Chloroflexi 200795|Chloroflexi S Modulates RecA activity recX - - ko:K03565 - - - - ko00000,ko03400 - - - RecX YYD2_k127_952591_4 926569.ANT_24800 4.706e-58 207.0 COG3303@1|root,COG3303@2|Bacteria,2GBNG@200795|Chloroflexi 200795|Chloroflexi C Cytochrome c7 and related cytochrome c - - - - - - - - - - - - Cytochrome_C7 YYD2_k127_952591_0 926569.ANT_24790 1.978e-216 694.0 COG0243@1|root,COG0243@2|Bacteria,2G844@200795|Chloroflexi 200795|Chloroflexi C Molydopterin dinucleotide binding domain - - - - - - - - - - - - Molybdopterin,Molydop_binding YYD2_k127_952591_3 926569.ANT_24780 4.001e-109 359.0 COG0437@1|root,COG0437@2|Bacteria,2G6C1@200795|Chloroflexi 200795|Chloroflexi C 4Fe-4S dicluster domain - - - ko:K00184 - - - - ko00000 5.A.3 - - Fer4_7 YYD2_k127_952591_1 926569.ANT_24770 8.318e-200 634.0 COG5557@1|root,COG5557@2|Bacteria,2G68D@200795|Chloroflexi 200795|Chloroflexi C PFAM Polysulphide reductase, NrfD - - - ko:K00185 - - - - ko00000 5.A.3 - - NrfD YYD2_k127_952591_6 926569.ANT_24760 1.068e-38 152.0 2DSXF@1|root,33HTI@2|Bacteria,2G9HW@200795|Chloroflexi 200795|Chloroflexi S Protein of unknown function (DUF3341) - - - - - - - - - - - - DUF3341 YYD2_k127_952591_5 926569.ANT_24750 2.116e-42 162.0 COG2010@1|root,COG2010@2|Bacteria,2G7FH@200795|Chloroflexi 200795|Chloroflexi C Cytochrome C oxidase, cbb3-type, subunit III - - - - - - - - - - - - Cytochrome_CBB3 YYD2_k127_952591_7 1037409.BJ6T_24690 0.0001814 51.0 COG3258@1|root,COG3258@2|Bacteria,1QTYW@1224|Proteobacteria,2TWPT@28211|Alphaproteobacteria,3JVV3@41294|Bradyrhizobiaceae 28211|Alphaproteobacteria C Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - ko:K08738 ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 3.D.4.6 - - Cytochrome_CBB3 YYD2_k127_952591_2 1121472.AQWN01000003_gene1546 1.317e-134 437.0 COG1960@1|root,COG1960@2|Bacteria,1TRR9@1239|Firmicutes,24AJB@186801|Clostridia,260H9@186807|Peptococcaceae 186801|Clostridia I PFAM Acyl-CoA dehydrogenase, C-terminal domain - - - - - - - - - - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N YYD2_k127_962584_2 926550.CLDAP_38700 1.943e-46 183.0 COG4447@1|root,COG4447@2|Bacteria,2G7EF@200795|Chloroflexi 200795|Chloroflexi S cellulose binding - - - - - - - - - - - - - YYD2_k127_962584_4 316274.Haur_0034 1.904e-29 125.0 COG2968@1|root,COG2968@2|Bacteria 2|Bacteria S cellular response to heat - - - ko:K09807 - - - - ko00000 - - - SIMPL YYD2_k127_962584_0 861299.J421_4065 1.637e-183 588.0 COG2303@1|root,COG2303@2|Bacteria 2|Bacteria E choline dehydrogenase activity choD GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009405,GO:0016491,GO:0016614,GO:0016899,GO:0016995,GO:0044419,GO:0051704,GO:0055114 1.1.3.6 ko:K03333 ko00984,ko01120,map00984,map01120 - R01459 RC00146 ko00000,ko00001,ko01000 - - - DAO,FAD_binding_2,GMC_oxred_C,GMC_oxred_N YYD2_k127_962584_3 160799.PBOR_10425 2.395e-45 173.0 COG0500@1|root,COG2226@2|Bacteria,1V7TR@1239|Firmicutes,4HJ1N@91061|Bacilli,26UAU@186822|Paenibacillaceae 91061|Bacilli Q ubiE/COQ5 methyltransferase family - - - - - - - - - - - - Methyltransf_11,Methyltransf_25,Ubie_methyltran YYD2_k127_962584_1 1297742.A176_04679 8.031e-69 243.0 COG0300@1|root,COG0300@2|Bacteria,1R5VP@1224|Proteobacteria,430U9@68525|delta/epsilon subdivisions,2WW0M@28221|Deltaproteobacteria,2YXV8@29|Myxococcales 28221|Deltaproteobacteria S Belongs to the short-chain dehydrogenases reductases (SDR) family - - - - - - - - - - - - adh_short YYD2_k127_973091_3 926569.ANT_27430 7.324e-39 148.0 COG1366@1|root,COG1366@2|Bacteria,2G9DJ@200795|Chloroflexi 200795|Chloroflexi T PFAM Sulfate transporter antisigma-factor antagonist STAS - - - ko:K04749 - - - - ko00000,ko03021 - - - STAS,STAS_2 YYD2_k127_973091_4 1191523.MROS_1859 8.277e-28 117.0 COG2172@1|root,COG2172@2|Bacteria 2|Bacteria T sigma factor antagonist activity - - 2.7.11.1 ko:K04757,ko:K17752 - - - - ko00000,ko01000,ko01001,ko03021 - - - HATPase_c,HATPase_c_2,SpoIIE YYD2_k127_973091_0 926569.ANT_27450 1.06e-228 746.0 COG2203@1|root,COG2208@1|root,COG2203@2|Bacteria,COG2208@2|Bacteria,2G790@200795|Chloroflexi 200795|Chloroflexi T Stage II sporulation E family protein - - - - - - - - - - - - GAF_2,GAF_3,SpoIIE YYD2_k127_973091_2 340099.Teth39_0866 2.729e-42 158.0 COG0251@1|root,COG0251@2|Bacteria,1V6HG@1239|Firmicutes,24J8Y@186801|Clostridia,42GJ3@68295|Thermoanaerobacterales 186801|Clostridia J PFAM Endoribonuclease L-PSP yjgF - 3.5.99.10 ko:K09022 - - R11098,R11099 RC03275,RC03354 ko00000,ko01000 - - - Ribonuc_L-PSP YYD2_k127_973091_5 1047013.AQSP01000076_gene1473 6.871e-19 88.0 COG2020@1|root,COG2020@2|Bacteria,2NR07@2323|unclassified Bacteria 2|Bacteria O Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - - - - - - - - - - PEMT YYD2_k127_973091_6 1121948.AUAC01000004_gene92 0.0001414 51.0 2DQKT@1|root,337HF@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - Polyketide_cyc2 YYD2_k127_973091_1 383372.Rcas_1029 9.61e-82 280.0 COG1215@1|root,COG1215@2|Bacteria,2GBN6@200795|Chloroflexi 200795|Chloroflexi M Glycosyltransferase like family 2 - - - - - - - - - - - - Glycos_transf_2 YYD2_k127_985033_7 1408422.JHYF01000013_gene500 2.486e-08 56.0 COG4586@1|root,COG4586@2|Bacteria,1TP1N@1239|Firmicutes,247KC@186801|Clostridia,36F1A@31979|Clostridiaceae 186801|Clostridia S PFAM ABC transporter - - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran YYD2_k127_985033_2 697284.ERIC2_c09070 1.473e-65 232.0 COG4587@1|root,COG4587@2|Bacteria,1UZ3Y@1239|Firmicutes,4HFHM@91061|Bacilli,26V8Z@186822|Paenibacillaceae 91061|Bacilli S ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_6 YYD2_k127_985033_3 697284.ERIC2_c09080 1.082e-53 198.0 COG3694@1|root,COG3694@2|Bacteria,1V1MN@1239|Firmicutes,4HFXH@91061|Bacilli,26S9D@186822|Paenibacillaceae 91061|Bacilli S ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_6 YYD2_k127_985033_6 867903.ThesuDRAFT_00140 2.879e-24 112.0 COG0344@1|root,COG0344@2|Bacteria,1VA3J@1239|Firmicutes,24JA2@186801|Clostridia,3WCMQ@538999|Clostridiales incertae sedis 186801|Clostridia I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP plsY - 2.3.1.15 ko:K08591 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R00851,R09380 RC00004,RC00039,RC00041 ko00000,ko00001,ko00002,ko01000,ko01004 - - - G3P_acyltransf YYD2_k127_985033_5 926569.ANT_10580 1.537e-28 119.0 COG0184@1|root,COG0184@2|Bacteria,2G791@200795|Chloroflexi 200795|Chloroflexi J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA rpsO GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02956 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S15 YYD2_k127_985033_0 926569.ANT_10570 2.568e-314 979.0 COG1185@1|root,COG1185@2|Bacteria,2G5TS@200795|Chloroflexi 200795|Chloroflexi J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction pnp GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 ko:K00962 ko00230,ko00240,ko03018,map00230,map00240,map03018 M00394 R00437,R00438,R00439,R00440 RC02795 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 - - - KH_1,PNPase,RNase_PH,RNase_PH_C,S1 YYD2_k127_985033_1 926569.ANT_03400 3.063e-111 373.0 COG0477@1|root,COG2814@2|Bacteria,2GA6M@200795|Chloroflexi 200795|Chloroflexi EGP MFS_1 like family - - - - - - - - - - - - MFS_1 YYD2_k127_985033_4 485913.Krac_3174 2.284e-43 162.0 COG0617@1|root,COG0617@2|Bacteria,2G8X7@200795|Chloroflexi 200795|Chloroflexi J Aminoglycoside-2''-adenylyltransferase - - - ko:K19545 - - - - ko00000,ko01504 - - - NTP_transf_5 ## 2120 queries scanned ## Total time (seconds): 3.9674017429351807 ## Rate: 534.35 q/s