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Overview

ID MAG00128
Name BYD3_bin.40
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Bacteroidota
Class Bacteroidia
Order Bacteroidales
Family UBA10428
Genus UBA5072
Species
Assembly information
Completeness (%) 78.05
Contamination (%) 1.68
GC content (%) 42.0
N50 (bp) 12,233
Genome size (bp) 2,983,223

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2490

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1022811_0 glycoside hydrolase family 2 sugar binding - - - 0.0 1026.0
BYD3_k127_1022811_1 Peptidase C1-like family K01372 - 3.4.22.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003914 523.0
BYD3_k127_1022811_2 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002663 282.0
BYD3_k127_1022811_3 mannose-6-phosphate isomerase K01809 - 5.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000009521 222.0
BYD3_k127_1022811_4 Transcriptional regulator - - - 0.0000000001017 64.0
BYD3_k127_1063283_0 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 - 2.1.1.13 0.0 1586.0
BYD3_k127_1063283_1 Amp-dependent synthetase and ligase K01897 - 6.2.1.3 1.544e-259 813.0
BYD3_k127_1063283_10 COG NOG29365 non supervised orthologous group - - - 0.00000000000007489 79.0
BYD3_k127_1063283_11 Sporulation related domain - - - 0.00006446 52.0
BYD3_k127_1063283_2 Phosphofructokinase K00895,K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004588 601.0
BYD3_k127_1063283_3 Phosphofructokinase K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008851 590.0
BYD3_k127_1063283_4 Catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine K01760,K01761 - 4.4.1.11,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 581.0
BYD3_k127_1063283_5 Major Facilitator Superfamily K02429 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004065 452.0
BYD3_k127_1063283_6 Catalyzes the conversion of dihydroorotate to orotate K00226,K17723 - 1.3.1.1,1.3.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 350.0
BYD3_k127_1063283_7 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 286.0
BYD3_k127_1063283_8 PFAM Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001187 287.0
BYD3_k127_1063283_9 PAS fold - - - 0.000000000000000000000000004219 115.0
BYD3_k127_1105111_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 1.711e-238 752.0
BYD3_k127_1105111_1 GIY-YIG type nucleases (URI domain) K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 3.65e-215 684.0
BYD3_k127_1105111_2 Polyprenyl synthetase K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007675 345.0
BYD3_k127_1105111_3 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA - - - 0.000000000000000001558 87.0
BYD3_k127_1114307_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840 - 5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 606.0
BYD3_k127_1114307_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 591.0
BYD3_k127_1114307_10 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000002858 151.0
BYD3_k127_1114307_11 PFAM Stress responsive alpha-beta barrel domain protein - - - 0.0000000000000000000001081 101.0
BYD3_k127_1114307_2 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 621.0
BYD3_k127_1114307_3 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004416 545.0
BYD3_k127_1114307_4 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 517.0
BYD3_k127_1114307_5 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 384.0
BYD3_k127_1114307_6 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004175 374.0
BYD3_k127_1114307_7 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005661 349.0
BYD3_k127_1114307_8 Cell envelope biogenesis protein OmpA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004316 323.0
BYD3_k127_1114307_9 membrane - - - 0.00000000000000000000000000000000000000000003499 173.0
BYD3_k127_1123666_0 AMP-binding enzyme K01897 - 6.2.1.3 1.11e-216 689.0
BYD3_k127_1123666_1 GTP cyclohydrolase II K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 610.0
BYD3_k127_1123666_2 Amino acid kinase family K00926 - 2.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009839 415.0
BYD3_k127_1123666_3 Glycosyl transferase family 21 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 403.0
BYD3_k127_1123666_4 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006475 364.0
BYD3_k127_1123666_5 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006169 356.0
BYD3_k127_1123666_6 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K01227 - 3.2.1.96 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 291.0
BYD3_k127_1123666_7 Permease, YjgP YjgQ family K07091 - - 0.000000000000000000000000000000000000001391 159.0
BYD3_k127_1123666_8 aminotransferase class I and II - - - 0.00000000000000000000000000000000004188 139.0
BYD3_k127_1137538_0 Psort location OuterMembrane, score - - - 3.498e-203 661.0
BYD3_k127_1137538_1 Sigma factor regulatory protein, FecR PupR family - - - 0.0000000000000000000000000000000000000004707 162.0
BYD3_k127_1137538_2 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000001406 151.0
BYD3_k127_1175964_0 Periplasmic copper-binding protein (NosD) K01209 - 3.2.1.55 6.419e-255 801.0
BYD3_k127_1175964_1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K00574,K07755 - 2.1.1.137,2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003607 332.0
BYD3_k127_1175964_2 Dihydrofolate reductase K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000000000000000000112 214.0
BYD3_k127_1175964_3 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000009739 157.0
BYD3_k127_1175964_4 YCII-related domain - - - 0.00000000000000000000000000000000001055 140.0
BYD3_k127_1175964_5 Domain of unknown function (DUF202) K00389 - - 0.00000000000000000000000001171 113.0
BYD3_k127_1176183_0 Penicillin-binding Protein dimerisation domain K03587 - 3.4.16.4 1.319e-210 675.0
BYD3_k127_1176183_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 496.0
BYD3_k127_1176183_2 - - - - 0.0000000000001228 76.0
BYD3_k127_1176183_3 MraW methylase family K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000003666 63.0
BYD3_k127_1204163_0 TonB dependent receptor - - - 1.136e-272 875.0
BYD3_k127_1204163_1 Domain of unknown function (DUF4974) - - - 0.0000000000000000000000000000000000000000000001076 175.0
BYD3_k127_1236372_0 ATP synthesis coupled electron transport K12137,K15828 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 583.0
BYD3_k127_1236372_1 ATP synthesis coupled electron transport K12137,K15828 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003536 439.0
BYD3_k127_1236372_2 NADH dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 420.0
BYD3_k127_1236372_3 Hydrogenase 4 membrane K12140 - - 0.0000000000000000000000000000000000000000000009787 172.0
BYD3_k127_1294514_0 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 2.031e-250 791.0
BYD3_k127_1294514_1 thiolester hydrolase activity K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003462 324.0
BYD3_k127_1294514_2 Small Multidrug Resistance protein K11741 - - 0.00000000000000000000000000000000000000000000000000000004749 196.0
BYD3_k127_1294514_3 Glyoxalase-like domain - - - 0.0000000000000000000000000000000283 131.0
BYD3_k127_1305918_0 PFAM Transglycosylase SLT domain K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 501.0
BYD3_k127_1305918_1 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009262 363.0
BYD3_k127_1305918_2 GDSL-like Lipase/Acylhydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 312.0
BYD3_k127_1334053_0 Ftsk_gamma K03466 - - 3.32e-264 835.0
BYD3_k127_1334053_1 Xaa-His dipeptidase K01270 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006207 610.0
BYD3_k127_1334053_2 electron transport complex, RnfABCDGE type, B subunit K03616 - - 0.0000000000000000000000000000000000000000000000000000000006467 205.0
BYD3_k127_1334053_3 Outer membrane lipoprotein carrier protein LolA K03634 - - 0.000000000000000000000000000000000000000005469 162.0
BYD3_k127_1334053_4 response to oxidative stress K03803 GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.000000000000002107 81.0
BYD3_k127_1381585_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1199.0
BYD3_k127_1381585_1 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 320.0
BYD3_k127_1381585_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 314.0
BYD3_k127_1381585_3 outer membrane efflux protein - - - 0.00000000000000000000000000000000008267 144.0
BYD3_k127_1403161_0 Dehydrogenase E1 component K11381 - 1.2.4.4 0.0 1265.0
BYD3_k127_1403161_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1074.0
BYD3_k127_1403161_10 DNA polymerase III subunit epsilon K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008017 392.0
BYD3_k127_1403161_11 COGs COG1368 Phosphoglycerol transferase and related protein alkaline phosphatase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007327 404.0
BYD3_k127_1403161_12 PHP domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 390.0
BYD3_k127_1403161_13 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 372.0
BYD3_k127_1403161_14 YceG-like family K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 348.0
BYD3_k127_1403161_15 Sodium/calcium exchanger protein K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 315.0
BYD3_k127_1403161_16 UTRA K03710,K10711 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 298.0
BYD3_k127_1403161_17 PFAM YicC-like family, N-terminal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 288.0
BYD3_k127_1403161_18 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002586 274.0
BYD3_k127_1403161_19 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.000000000000000000000000000000000000000000000000000000000000000000001174 240.0
BYD3_k127_1403161_2 ABC transporter, ATP-binding protein K06147,K11085 - - 3.841e-234 739.0
BYD3_k127_1403161_20 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000004039 227.0
BYD3_k127_1403161_21 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000000000000000000000000000000000000000004596 164.0
BYD3_k127_1403161_22 - - - - 0.000000000000000000000000000000002835 146.0
BYD3_k127_1403161_3 Class II Aldolase and Adducin N-terminal domain - - - 2.068e-223 710.0
BYD3_k127_1403161_4 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 2.321e-204 644.0
BYD3_k127_1403161_5 Alcohol dehydrogenase GroES-like domain K19956 - - 3.941e-199 629.0
BYD3_k127_1403161_6 Membrane-bound serine protease (ClpP class) K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 496.0
BYD3_k127_1403161_7 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 487.0
BYD3_k127_1403161_8 PFAM Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II K01835 - 5.4.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008604 465.0
BYD3_k127_1403161_9 Psort location Cytoplasmic, score K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007828 434.0
BYD3_k127_1424949_0 formate C-acetyltransferase activity K00656 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.3.1.54 0.0 1140.0
BYD3_k127_1424949_1 Glycosyl hydrolase family 30 beta sandwich domain K01201 - 3.2.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002336 553.0
BYD3_k127_1424949_2 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 340.0
BYD3_k127_1424949_3 glycyl-radical enzyme activating activity K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002405 277.0
BYD3_k127_1424949_4 DeoR C terminal sensor domain - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000007789 224.0
BYD3_k127_1424949_5 Hemerythrin HHE cation binding domain K07216 - - 0.0000000000000000000000000002549 119.0
BYD3_k127_1425804_0 Pyridoxal-dependent decarboxylase conserved domain K01593 - 4.1.1.105,4.1.1.28 1.468e-194 617.0
BYD3_k127_1425804_1 P-loop ATPase protein family K06958,K07102 GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006022,GO:0006040,GO:0006082,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005051 456.0
BYD3_k127_1425804_2 PFAM Nucleotidyl transferase K00966 - 2.7.7.13 0.0000000000000000000000000000000147 128.0
BYD3_k127_1447126_0 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 306.0
BYD3_k127_1447126_1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000000000000000000000000000000000005047 241.0
BYD3_k127_1447126_2 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000001374 164.0
BYD3_k127_1447126_3 TonB-linked outer membrane protein, SusC RagA family - - - 0.000000000000000000000000000000004246 131.0
BYD3_k127_1447126_4 response to copper ion - - - 0.0000000008566 63.0
BYD3_k127_146458_0 ASPIC and UnbV - - - 2.832e-263 847.0
BYD3_k127_146458_1 SusD family K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003517 260.0
BYD3_k127_1494884_0 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009852 589.0
BYD3_k127_1494884_1 metallopeptidase activity - - - 0.0000000000001531 85.0
BYD3_k127_1494884_2 C-terminal domain of CHU protein family - - - 0.000001358 62.0
BYD3_k127_1505802_0 Alanine racemase, C-terminal domain K01775,K01929 - 5.1.1.1,6.3.2.10 3.648e-265 840.0
BYD3_k127_1505802_1 Permease K06901 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 562.0
BYD3_k127_1505802_2 UPF0365 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 464.0
BYD3_k127_1505802_3 transferase activity, transferring glycosyl groups K00754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004667 326.0
BYD3_k127_1505802_4 HAD-hyrolase-like K07025 - - 0.0000000000000000000000000000000000000000000000000000005535 201.0
BYD3_k127_1505802_5 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000223 177.0
BYD3_k127_1505802_6 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000007584 124.0
BYD3_k127_1505802_7 ATP-dependent Clp protease adaptor protein ClpS K06891 - - 0.000000000000000000000000003249 113.0
BYD3_k127_1505802_8 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K03772,K03773 - 5.2.1.8 0.000000000000000000176 95.0
BYD3_k127_1505802_9 PASTA domain K01921,K08884,K12132 - 2.7.11.1,6.3.2.4 0.000000002233 64.0
BYD3_k127_1523450_0 SPTR Fibronectin type III domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008172 463.0
BYD3_k127_1523450_1 chitinase - - - 0.0000000000000000000000000000000000000001342 160.0
BYD3_k127_1523450_2 C-terminal domain of CHU protein family - - - 0.000000294 63.0
BYD3_k127_153012_0 Alpha-2-Macroglobulin K06894 - - 0.0 1707.0
BYD3_k127_153012_1 Peptidase family U32 K08303 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 567.0
BYD3_k127_153012_2 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 521.0
BYD3_k127_153012_3 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 440.0
BYD3_k127_153012_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006065 467.0
BYD3_k127_153012_5 RsgA N-terminal domain K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005164 366.0
BYD3_k127_153012_6 PFAM Activator of Hsp90 ATPase - - - 0.00000000000000000000000000000000000000000007396 163.0
BYD3_k127_153012_7 - - - - 0.00000000000000000000000000000000000002094 153.0
BYD3_k127_153012_8 Domain of unknown function (DUF4369) - - - 0.000000000000000000000000003996 114.0
BYD3_k127_1562976_0 ABC transporter, permease protein K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005596 504.0
BYD3_k127_1562976_1 galactose-1-phosphate uridylyltransferase K00965 GO:0003674,GO:0003824,GO:0004335,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006012,GO:0006793,GO:0006796,GO:0008108,GO:0008150,GO:0008152,GO:0008198,GO:0008270,GO:0009056,GO:0009987,GO:0016052,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0019200,GO:0019318,GO:0019320,GO:0019388,GO:0033499,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046835,GO:0046872,GO:0046914,GO:0070569,GO:0071704,GO:1901575 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 479.0
BYD3_k127_1562976_10 Secretory lipase - - - 0.0000000000000109 79.0
BYD3_k127_1562976_2 outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 429.0
BYD3_k127_1562976_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 392.0
BYD3_k127_1562976_4 ABC transporter, ATP-binding protein K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 379.0
BYD3_k127_1562976_5 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008079 359.0
BYD3_k127_1562976_6 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008482 334.0
BYD3_k127_1562976_7 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004423 302.0
BYD3_k127_1562976_8 Secretory lipase - - - 0.0000000000000000000000000000000000000000000000001903 186.0
BYD3_k127_1562976_9 - - - - 0.000000000000000001161 94.0
BYD3_k127_1593254_0 Domain of unknown function (DUF5060) - - - 1.943e-208 661.0
BYD3_k127_1593254_1 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005136 371.0
BYD3_k127_1593254_2 - - - - 0.00000000000000000000000000000001573 129.0
BYD3_k127_1593254_3 Glycogen debranching enzyme - - - 0.0000003835 57.0
BYD3_k127_1680358_0 Motility related/secretion protein - - - 0.0 2150.0
BYD3_k127_1680358_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.0 1038.0
BYD3_k127_1680358_10 mannose-1-phosphate guanylyltransferase K00971 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007735 464.0
BYD3_k127_1680358_11 transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 425.0
BYD3_k127_1680358_12 Hemolysin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 400.0
BYD3_k127_1680358_13 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 357.0
BYD3_k127_1680358_14 Lysin motif K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 359.0
BYD3_k127_1680358_15 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 333.0
BYD3_k127_1680358_16 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006274 302.0
BYD3_k127_1680358_17 Aconitase C-terminal domain K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008292 293.0
BYD3_k127_1680358_18 Peptidase S66 K01297 - 3.4.17.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 293.0
BYD3_k127_1680358_19 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004644 287.0
BYD3_k127_1680358_2 Class II glutamine amidotransferase K00764 - 2.4.2.14 3.786e-273 853.0
BYD3_k127_1680358_20 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003992 276.0
BYD3_k127_1680358_21 Signal peptidase (SPase) II K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000000000000000000000000000005732 253.0
BYD3_k127_1680358_22 OmpA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001121 259.0
BYD3_k127_1680358_23 GSCFA family - - - 0.000000000000000000000000000000000000000000000000000000000000000002939 233.0
BYD3_k127_1680358_24 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000002744 219.0
BYD3_k127_1680358_25 Serine aminopeptidase, S33 K01048 - 3.1.1.5 0.00000000000000000000000000000000000000000000000000000000002595 215.0
BYD3_k127_1680358_26 Prokaryotic dksA/traR C4-type zinc finger - - - 0.000000000000000000000000000000000000000000000000000000001898 203.0
BYD3_k127_1680358_27 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000000000000004336 183.0
BYD3_k127_1680358_28 Belongs to the UPF0102 family K07460 - - 0.000000000000000000000000000002683 123.0
BYD3_k127_1680358_29 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000003874 123.0
BYD3_k127_1680358_3 Aconitase family (aconitate hydratase) K01703 - 4.2.1.33,4.2.1.35 8.597e-237 738.0
BYD3_k127_1680358_30 ribosomal protein - - - 0.00000000000000000000000004994 111.0
BYD3_k127_1680358_31 GIY-YIG catalytic domain K07461 - - 0.0000000000000000000000001316 110.0
BYD3_k127_1680358_32 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.000000000000000000000001372 105.0
BYD3_k127_1680358_33 Sporulation related domain - - - 0.00000000000000000244 91.0
BYD3_k127_1680358_34 GSCFA family - - - 0.00000000000000011 82.0
BYD3_k127_1680358_35 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000004449 68.0
BYD3_k127_1680358_36 mttA/Hcf106 family K03116 - - 0.0000000000009018 70.0
BYD3_k127_1680358_37 Domain of unknown function (DUF4834) - - - 0.00001217 53.0
BYD3_k127_1680358_38 Late embryogenesis abundant protein - - - 0.00001922 55.0
BYD3_k127_1680358_39 - - - - 0.0001779 55.0
BYD3_k127_1680358_4 Belongs to the alpha-IPM synthase homocitrate synthase family K09011 - 2.3.1.182 6.083e-223 700.0
BYD3_k127_1680358_5 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 5.193e-222 695.0
BYD3_k127_1680358_6 3-isopropylmalate dehydrogenase activity K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0040007,GO:0044424,GO:0044464,GO:0055114 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009813 546.0
BYD3_k127_1680358_7 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003644 489.0
BYD3_k127_1680358_8 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 482.0
BYD3_k127_1680358_9 Belongs to the PdxA family K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 468.0
BYD3_k127_1734671_0 PFAM Y_Y_Y domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003523 379.0
BYD3_k127_1767362_0 Belongs to the glycosyl hydrolase 8 (cellulase D) family - - - 0.0000000000000000000000000000000000000000000000000000000005126 226.0
BYD3_k127_1767362_1 Immunoglobulin - - - 0.000000000000004337 89.0
BYD3_k127_1767362_2 TIGRFAM Bacteroidetes-specific - - - 0.0000000117 63.0
BYD3_k127_1790149_0 Belongs to the aldehyde dehydrogenase family K00128,K13821 - 1.2.1.3,1.2.1.88,1.5.5.2 1.847e-251 784.0
BYD3_k127_1790149_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 3.048e-213 674.0
BYD3_k127_1790149_2 Saccharopine dehydrogenase K00290,K00293 - 1.5.1.10,1.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009574 610.0
BYD3_k127_1790149_3 transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 569.0
BYD3_k127_1790149_4 Alanine dehydrogenase/PNT, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007826 420.0
BYD3_k127_1790149_5 Catalyzes the reversible epimerization of cellobiose to 4-O-beta-D-glucopyranosyl-D-mannose (Glc-Man) K16213 - 5.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008506 369.0
BYD3_k127_1790149_6 PFAM Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000183 288.0
BYD3_k127_1790149_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000861 266.0
BYD3_k127_1790149_8 Regulatory protein MarR - - - 0.000000000000001225 82.0
BYD3_k127_1790149_9 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00003153 47.0
BYD3_k127_1802490_0 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 568.0
BYD3_k127_1802490_1 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004712 332.0
BYD3_k127_1802490_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006679 356.0
BYD3_k127_1802490_3 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 311.0
BYD3_k127_1802490_4 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus K03624,K06140 - - 0.00000000000000000000000000000001447 132.0
BYD3_k127_1802490_5 Elongation factor K06140 - - 0.00000000008864 68.0
BYD3_k127_1828731_0 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 373.0
BYD3_k127_1828731_1 Belongs to the peptidase S51 family K05995 - 3.4.13.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000889 324.0
BYD3_k127_1828731_2 transcriptional regulator - - - 0.0000000000000000000000000000000004646 134.0
BYD3_k127_1828731_3 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000000000000000039 141.0
BYD3_k127_1879228_0 Flavin containing amine oxidoreductase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 564.0
BYD3_k127_1879228_1 ergosterol biosynthetic process K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008652 377.0
BYD3_k127_1879228_2 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008885 248.0
BYD3_k127_1879228_3 Putative prokaryotic signal transducing protein - - - 0.0000000000000000000000000000000000000000000000000000000002661 213.0
BYD3_k127_1879228_4 Pyruvate phosphate dikinase, PEP pyruvate binding domain - - - 0.00000006964 54.0
BYD3_k127_1925369_0 Glycosyl-hydrolase 97 C-terminal, oligomerisation K01187 - 3.2.1.20 2.686e-250 789.0
BYD3_k127_1925369_1 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008485 525.0
BYD3_k127_1925369_2 bacterial-type flagellum-dependent cell motility - - - 0.00000000000000000000000000867 113.0
BYD3_k127_1932703_0 DNA Topoisomerase IV K02621 - - 0.0 1127.0
BYD3_k127_1932703_1 TopoisomeraseII K02622 - - 1.56e-291 905.0
BYD3_k127_1932703_10 - - - - 0.00000000000000000000000000000000000000000000005818 187.0
BYD3_k127_1932703_11 Long-chain fatty acid--CoA ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000001197 144.0
BYD3_k127_1932703_12 Domain of unknown function (DUF3127) - - - 0.0000000000000000000000000000000000002161 143.0
BYD3_k127_1932703_13 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.0000000000000000000000000000000006826 136.0
BYD3_k127_1932703_14 Endonuclease Exonuclease Phosphatase - - - 0.00000000000002889 85.0
BYD3_k127_1932703_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 8.279e-273 849.0
BYD3_k127_1932703_3 WD40 repeats - - - 8.909e-254 816.0
BYD3_k127_1932703_4 Pfam:DUF303 K05970 - 3.1.1.53 8.767e-214 683.0
BYD3_k127_1932703_5 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005463 419.0
BYD3_k127_1932703_6 Peptidase S8 K08651 - 3.4.21.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004036 323.0
BYD3_k127_1932703_7 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000006723 269.0
BYD3_k127_1932703_8 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004732 276.0
BYD3_k127_1932703_9 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000003608 186.0
BYD3_k127_1957384_0 Cytochrome c552 K03385 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0006091,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016491,GO:0016661,GO:0016662,GO:0019645,GO:0020037,GO:0022900,GO:0022904,GO:0030288,GO:0030313,GO:0031975,GO:0042279,GO:0042597,GO:0044237,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0097159,GO:0098809,GO:1901363 1.7.2.2 1.426e-234 734.0
BYD3_k127_1957384_1 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009066 577.0
BYD3_k127_1957384_2 SprB repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 385.0
BYD3_k127_1957384_3 PFAM NapC NirT cytochrome c family, N-terminal region K15876 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001793 272.0
BYD3_k127_1957384_4 L,D-transpeptidase catalytic domain K21470 - - 0.00000000000000000000000000000000000000000000000000000000000000003067 242.0
BYD3_k127_1957384_5 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000001002 188.0
BYD3_k127_1957384_6 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0000000000000000000000000000000000000000000000004094 194.0
BYD3_k127_1957384_7 Type IX secretion system membrane protein PorP/SprF - - - 0.0000000000000000000000000000000000000000000000009788 186.0
BYD3_k127_1957384_8 arylsulfatase activity - - - 0.000000000000000000000000000000000005383 145.0
BYD3_k127_1957384_9 Belongs to the glycosyl hydrolase 8 (cellulase D) family - - - 0.000000003019 71.0
BYD3_k127_1980025_0 Pfam:HipA_N K07154 - 2.7.11.1 3.67e-247 768.0
BYD3_k127_1980025_1 Protein of unknown function (DUF4038) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005181 585.0
BYD3_k127_1980025_2 NmrA family transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008521 406.0
BYD3_k127_1980025_3 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000000000000000002069 164.0
BYD3_k127_1980025_4 Belongs to the glycosyl hydrolase 28 family - - - 0.000007815 54.0
BYD3_k127_1980440_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1218.0
BYD3_k127_1980440_1 Pyrrolo-quinoline quinone K00117 - 1.1.5.2 3.295e-278 872.0
BYD3_k127_1980440_2 Pyridoxal-dependent decarboxylase conserved domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 498.0
BYD3_k127_1980440_3 Glycosyl hydrolase family 3 C-terminal domain K05349 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008185 422.0
BYD3_k127_1980440_4 NADH pyrophosphatase zinc ribbon domain K03426 - 3.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 345.0
BYD3_k127_1980440_5 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) - - - 0.0000000000000000000000000000000000000000000000000000000000007845 213.0
BYD3_k127_1980440_6 - - - - 0.00000001674 63.0
BYD3_k127_1981745_0 Glycosyl hydrolase, family 15 K01178 - 3.2.1.3 2.994e-249 781.0
BYD3_k127_1981745_1 PFAM Penicillin binding protein transpeptidase domain K05366 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007514 506.0
BYD3_k127_1981745_10 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000242 164.0
BYD3_k127_1981745_11 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000002407 64.0
BYD3_k127_1981745_12 - - - - 0.0001721 50.0
BYD3_k127_1981745_2 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004788 483.0
BYD3_k127_1981745_3 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 419.0
BYD3_k127_1981745_4 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 304.0
BYD3_k127_1981745_5 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001199 281.0
BYD3_k127_1981745_6 Protein of unknown function (DUF3078) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001388 270.0
BYD3_k127_1981745_7 Nucleoside-diphosphate-sugar epimerases - - - 0.000000000000000000000000000000000000000000000005761 180.0
BYD3_k127_1981745_8 PFAM Glucose Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000000000002439 171.0
BYD3_k127_1981745_9 peptidase activity K20333 - - 0.000000000000000000000000000000000000000000009524 171.0
BYD3_k127_1984841_0 FtsX-like permease family K02004 - - 3.712e-223 716.0
BYD3_k127_1984841_1 COG COG1051 ADP-ribose pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007951 252.0
BYD3_k127_1984841_3 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000000000000000103 199.0
BYD3_k127_1984841_4 FR47-like protein - - - 0.00000000000000000000000000000000000000000000000000000009879 203.0
BYD3_k127_2013896_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 5.069e-262 814.0
BYD3_k127_2013896_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.969e-253 788.0
BYD3_k127_2013896_10 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000006809 103.0
BYD3_k127_2013896_11 ATP synthase, delta epsilon subunit, beta-sandwich domain protein K02114 - - 0.00000000000000000000839 93.0
BYD3_k127_2013896_12 Ribosomal L32p protein family K02911 - - 0.000000000000000000013 92.0
BYD3_k127_2013896_13 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000004723 91.0
BYD3_k127_2013896_14 helix_turn_helix, arabinose operon control protein - - - 0.000000000000003157 80.0
BYD3_k127_2013896_15 - - - - 0.00000000001995 68.0
BYD3_k127_2013896_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0071704 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 488.0
BYD3_k127_2013896_3 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 392.0
BYD3_k127_2013896_4 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 361.0
BYD3_k127_2013896_5 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000006321 153.0
BYD3_k127_2013896_6 Psort location Cytoplasmic, score 8.96 - - - 0.00000000000000000000000000000000000001118 149.0
BYD3_k127_2013896_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000002358 132.0
BYD3_k127_2013896_8 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000002417 127.0
BYD3_k127_2013896_9 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000008835 100.0
BYD3_k127_2014667_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1323.0
BYD3_k127_2014667_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1199.0
BYD3_k127_2014667_10 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 293.0
BYD3_k127_2014667_11 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005237 267.0
BYD3_k127_2014667_12 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000000000000000000006715 226.0
BYD3_k127_2014667_13 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K03772,K03773 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000001882 207.0
BYD3_k127_2014667_14 MraZ protein, putative antitoxin-like K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.0000000000000000000000000000000000000000005124 162.0
BYD3_k127_2014667_15 RNA polymerase, sigma factor K03088 - - 0.00000000000000000000000000000000000000007624 158.0
BYD3_k127_2014667_16 - - - - 0.000000000000000000000000001651 117.0
BYD3_k127_2014667_17 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000005509 119.0
BYD3_k127_2014667_18 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000004041 115.0
BYD3_k127_2014667_19 - - - - 0.00000000000000000005351 94.0
BYD3_k127_2014667_2 Amp-dependent synthetase and ligase K00655,K01897 - 2.3.1.51,6.2.1.3 3.284e-271 857.0
BYD3_k127_2014667_20 - - - - 0.000000000000005662 77.0
BYD3_k127_2014667_3 Amino acid kinase family K00928 - 2.7.2.4 7.835e-198 626.0
BYD3_k127_2014667_4 phosphate transporter K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003127 519.0
BYD3_k127_2014667_5 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 466.0
BYD3_k127_2014667_6 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 372.0
BYD3_k127_2014667_7 Biotin-lipoyl like K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006196 363.0
BYD3_k127_2014667_8 Acyl-transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006491 325.0
BYD3_k127_2014667_9 Psort location Extracellular, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009943 323.0
BYD3_k127_2019825_0 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 476.0
BYD3_k127_2019825_1 protein conserved in bacteria K09922 - - 0.000000000000000000000000000000000000000000008483 166.0
BYD3_k127_2019825_2 Domain of unknown function (DUF2088) - - - 0.00000000000000000000175 94.0
BYD3_k127_2019825_4 Outer membrane protein beta-barrel domain - - - 0.00000000003232 72.0
BYD3_k127_2041230_0 GXGXG motif K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.0 2139.0
BYD3_k127_2041230_1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.0 1661.0
BYD3_k127_2041230_10 pfkB family carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006202 321.0
BYD3_k127_2041230_11 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 310.0
BYD3_k127_2041230_12 spore germination - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000022 272.0
BYD3_k127_2041230_13 AdP-ribose pyrophosphatase K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000002636 252.0
BYD3_k127_2041230_14 PspC domain protein K03973 - - 0.00000000000000000000000000000000000000000000000000000000000000005492 242.0
BYD3_k127_2041230_15 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000004144 216.0
BYD3_k127_2041230_16 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000005914 188.0
BYD3_k127_2041230_17 PFAM PspC domain K03973 - - 0.000000000000000000000000000000000000000000000000001358 189.0
BYD3_k127_2041230_18 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.000000000000000000000000000000000000000000002823 172.0
BYD3_k127_2041230_19 Transcriptional regulator PadR-like family K10947 - - 0.000000000000000000000000000000000000000000006349 165.0
BYD3_k127_2041230_2 GH3 auxin-responsive promoter - - - 8.143e-217 683.0
BYD3_k127_2041230_20 Regulates arginine biosynthesis genes K03402 - - 0.000000000000000000000000000000000000000000009152 167.0
BYD3_k127_2041230_21 MazG nucleotide pyrophosphohydrolase - - - 0.000000000000000000000000000000000000000003372 157.0
BYD3_k127_2041230_22 OsmC-like protein - - - 0.0000000000000000000000000000000000000005048 153.0
BYD3_k127_2041230_23 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000292 117.0
BYD3_k127_2041230_3 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 4.636e-213 671.0
BYD3_k127_2041230_4 Arginosuccinate synthase K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 2.814e-199 627.0
BYD3_k127_2041230_5 Citrate synthase, C-terminal domain K01647,K01659 - 2.3.3.1,2.3.3.5 4.875e-194 614.0
BYD3_k127_2041230_6 Psort location Cytoplasmic, score K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 603.0
BYD3_k127_2041230_7 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 452.0
BYD3_k127_2041230_8 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 349.0
BYD3_k127_2041230_9 Deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006752 325.0
BYD3_k127_2063324_0 amino acid K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002604 494.0
BYD3_k127_2063324_1 Pfam:Methyltransf_6 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 328.0
BYD3_k127_2063324_2 permease K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 342.0
BYD3_k127_2063324_3 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001941 280.0
BYD3_k127_2063324_4 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004442 260.0
BYD3_k127_2069574_0 AMP-binding enzyme K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008007 587.0
BYD3_k127_2069574_1 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 534.0
BYD3_k127_2069574_2 Flavin containing amine oxidoreductase K09516 - 1.3.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 459.0
BYD3_k127_2082008_0 Outer membrane receptor - - - 0.0 1128.0
BYD3_k127_2082008_1 SusD family K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003153 486.0
BYD3_k127_2082008_2 Domain of unknown function (DUF4974) - - - 0.0000000000000000000000000000000000000000000002007 182.0
BYD3_k127_2082008_3 PFAM ASPIC and UnbV - - - 0.0000000000000000000000000000000001032 137.0
BYD3_k127_2082008_4 RNA polymerase sigma-70 factor, ECF subfamily K03088 - - 0.0000000000000000000000000003573 121.0
BYD3_k127_2082008_5 Transcriptional regulator - - - 0.000000000000000000005639 94.0
BYD3_k127_2082008_6 Biotin and Thiamin Synthesis associated domain K03150 - 4.1.99.19 0.000000000000003698 77.0
BYD3_k127_2123511_0 AcrB/AcrD/AcrF family K15726 - - 0.0 1073.0
BYD3_k127_2123511_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 509.0
BYD3_k127_2123511_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004549 467.0
BYD3_k127_2123511_3 COG1131 ABC-type multidrug transport system, ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 319.0
BYD3_k127_2123511_4 DNA/RNA non-specific endonuclease K01173 - - 0.00000000000000000000000000000000000000000000001986 176.0
BYD3_k127_2123511_5 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 - - 0.00000000000000000006189 99.0
BYD3_k127_2123511_6 nitrate reductase, gamma subunit K00374 - 1.7.5.1 0.000000000000000373 80.0
BYD3_k127_2123511_8 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000009198 85.0
BYD3_k127_2123511_9 - - - - 0.0000009533 56.0
BYD3_k127_2136476_0 Bacterial regulatory protein, Fis family - - - 1.036e-202 640.0
BYD3_k127_2136476_1 ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 457.0
BYD3_k127_2136476_2 RND transporter K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008255 436.0
BYD3_k127_2136476_3 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006603 350.0
BYD3_k127_2136476_4 Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001367 279.0
BYD3_k127_2136476_5 COGs COG2610 H gluconate symporter and related permease K03299 - - 0.0000000000000000000000000000000000000000000000000000000000329 215.0
BYD3_k127_2136476_6 23S rRNA-intervening sequence protein - - - 0.00001512 48.0
BYD3_k127_2136476_7 - - - - 0.0000228 50.0
BYD3_k127_2152116_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K01817 - 4.2.1.20,5.3.1.24 1.928e-197 621.0
BYD3_k127_2152116_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000324 615.0
BYD3_k127_2152116_2 Anthranilate synthase component I K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 602.0
BYD3_k127_2152116_3 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006492 402.0
BYD3_k127_2152116_4 Clp protease K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 347.0
BYD3_k127_2152116_5 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002877 325.0
BYD3_k127_2152116_6 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000111 277.0
BYD3_k127_2152116_7 TIGRFAM glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005522 270.0
BYD3_k127_2152116_8 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K01817 GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20,5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000009663 219.0
BYD3_k127_215792_0 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000002059 201.0
BYD3_k127_215792_1 Type IX secretion system membrane protein PorP/SprF - - - 0.00000000000000000000000000000000000000000002045 173.0
BYD3_k127_215792_3 Pkd domain containing protein - - - 0.00002287 46.0
BYD3_k127_2187477_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 8.325e-224 699.0
BYD3_k127_2187477_1 ABC transporter, ATP-binding protein K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 345.0
BYD3_k127_2187477_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007302 330.0
BYD3_k127_2187477_3 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000513 204.0
BYD3_k127_2187987_0 Tat pathway signal sequence domain protein K03568 - - 7.502e-218 686.0
BYD3_k127_2187987_1 COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member K01144 - 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 486.0
BYD3_k127_2187987_10 - - - - 0.0001857 44.0
BYD3_k127_2187987_2 TIGRFAM Acidobacterial duplicated orphan permease K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007786 493.0
BYD3_k127_2187987_3 Psort location Cytoplasmic, score 9.26 K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000532 432.0
BYD3_k127_2187987_4 undecaprenyl-phosphate glucose phosphotransferase activity K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 291.0
BYD3_k127_2187987_5 RNA methyltransferase, RsmD family K08316 - 2.1.1.171 0.0000000000000000000000000000000000000000000000000000001245 199.0
BYD3_k127_2187987_6 PFAM Di-glucose binding within endoplasmic reticulum - - - 0.000000000000000000000000000000000003906 152.0
BYD3_k127_2187987_7 peptidase activity, acting on L-amino acid peptides - - - 0.0000000000000000000000000003125 131.0
BYD3_k127_2187987_8 Protein of unknown function (DUF3822) - - - 0.0000002279 62.0
BYD3_k127_2187987_9 Laminin G domain - - - 0.000001561 61.0
BYD3_k127_2191066_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 1.144e-211 676.0
BYD3_k127_2191066_1 Sugar (and other) transporter K08139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004196 475.0
BYD3_k127_2191066_2 Cupin 2, conserved barrel - - - 0.0000000000000000000000000000000000000000000000000000576 191.0
BYD3_k127_2191066_3 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000003597 131.0
BYD3_k127_2191066_4 TonB-dependent Receptor Plug Domain - - - 0.00000000000315 70.0
BYD3_k127_2191066_5 Domain of unknown function (DUF4251) - - - 0.00000000002084 72.0
BYD3_k127_2374866_0 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 1.417e-207 659.0
BYD3_k127_2374866_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008871 511.0
BYD3_k127_2409339_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 600.0
BYD3_k127_2409339_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009843 466.0
BYD3_k127_2409339_10 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000002006 117.0
BYD3_k127_2409339_11 Domain of unknown function (DUF1987) - - - 0.000000000000001453 82.0
BYD3_k127_2409339_12 response regulator, receiver - - - 0.0000000000001316 74.0
BYD3_k127_2409339_13 Putative auto-transporter adhesin, head GIN domain - - - 0.0000000001426 70.0
BYD3_k127_2409339_2 MORN repeat variant - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002058 266.0
BYD3_k127_2409339_3 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.0000000000000000000000000000000000000000000000000000000000000000000009569 250.0
BYD3_k127_2409339_4 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000000004018 221.0
BYD3_k127_2409339_5 TIGR02453 family - - - 0.00000000000000000000000000000000000000000000000000000000719 205.0
BYD3_k127_2409339_6 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.0000000000000000000000000000000000000000000000000000003601 202.0
BYD3_k127_2409339_7 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000001856 183.0
BYD3_k127_2409339_8 Cytidylate kinase-like family - - - 0.000000000000000000000000000000000000000000000000329 183.0
BYD3_k127_2409339_9 Transcriptional regulator - - - 0.000000000000000000000000000000000000003533 150.0
BYD3_k127_2429507_0 DegT/DnrJ/EryC1/StrS aminotransferase family K01740 - 2.5.1.49 3.1e-234 730.0
BYD3_k127_2429507_1 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008899 496.0
BYD3_k127_2429507_10 DoxX K16937 - 1.8.5.2 0.0000000000000000000000003465 121.0
BYD3_k127_2429507_11 - - - - 0.000000002624 70.0
BYD3_k127_2429507_12 PFAM Uncharacterised protein family UPF0324 - - - 0.00003017 46.0
BYD3_k127_2429507_2 Pyruvate formate lyase K00656 - 2.3.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 341.0
BYD3_k127_2429507_3 Protein of unknown function (DUF4038) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002889 321.0
BYD3_k127_2429507_4 4Fe-4S single cluster domain K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 304.0
BYD3_k127_2429507_5 PFAM PP-loop domain protein K06864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002328 273.0
BYD3_k127_2429507_6 Aldo/keto reductase family K07079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000228 250.0
BYD3_k127_2429507_7 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000002517 239.0
BYD3_k127_2429507_8 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000000000000000000000000000487 206.0
BYD3_k127_2429507_9 response regulator - - - 0.0000000000000000000000000000000000000000000000000001329 193.0
BYD3_k127_2432219_0 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 0.0 1504.0
BYD3_k127_2432219_1 SMP-30/Gluconolaconase/LRE-like region - - - 0.0 1259.0
BYD3_k127_2432219_10 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 346.0
BYD3_k127_2432219_11 Outer membrane protein transport protein (OMPP1/FadL/TodX) - - - 0.00000000000000000000000000000000000000000000000000000000000000005998 241.0
BYD3_k127_2432219_12 Protein of unknown function (DUF3823) - - - 0.000000000000000000000000000000000000000000000000000000000000001101 227.0
BYD3_k127_2432219_13 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000632 154.0
BYD3_k127_2432219_14 Sigma factor regulatory protein, FecR PupR family - - - 0.0000000000000000000000000000000000002271 153.0
BYD3_k127_2432219_15 DNA-dependent ATPase I and helicase II - - - 0.000000001277 61.0
BYD3_k127_2432219_17 Psort location OuterMembrane, score - - - 0.00003879 56.0
BYD3_k127_2432219_2 TonB-linked outer membrane protein, SusC RagA family - - - 1.576e-309 967.0
BYD3_k127_2432219_3 Beta-galactosidase - - - 8.496e-270 843.0
BYD3_k127_2432219_4 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 1.256e-262 814.0
BYD3_k127_2432219_5 Domain of unknown function (DUF5107) - - - 8.69e-222 726.0
BYD3_k127_2432219_6 COG NOG30008 non supervised orthologous group K21572 - - 2.172e-210 672.0
BYD3_k127_2432219_7 DNA-dependent ATPase I and helicase II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 608.0
BYD3_k127_2432219_8 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004647 445.0
BYD3_k127_2432219_9 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 383.0
BYD3_k127_2467664_0 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term K17108 - 3.2.1.45 0.0 1048.0
BYD3_k127_2467664_1 Protein of unknown function (DUF2961) - - - 4.099e-201 631.0
BYD3_k127_2467664_2 transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005258 557.0
BYD3_k127_2467664_3 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000009025 220.0
BYD3_k127_2486485_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1182.0
BYD3_k127_2486485_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000375 602.0
BYD3_k127_2486485_10 Divergent 4Fe-4S mono-cluster - - - 0.000000000000000000000000000000000000005375 150.0
BYD3_k127_2486485_11 Domain of unknown function (DUF4294) - - - 0.000000000000000000000000000000000005575 145.0
BYD3_k127_2486485_12 Sigma-70 region 2 - - - 0.0000000000000000000000000000000000389 141.0
BYD3_k127_2486485_13 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008104,GO:0008150,GO:0009966,GO:0010646,GO:0010738,GO:0023051,GO:0033036,GO:0034237,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051018,GO:0051179,GO:0065007,GO:1902531 3.1.4.58 0.00000000000000000000000001421 117.0
BYD3_k127_2486485_14 PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000002364 96.0
BYD3_k127_2486485_15 Divergent 4Fe-4S mono-cluster - - - 0.0000000002217 64.0
BYD3_k127_2486485_16 chaperone-mediated protein folding - - - 0.0000004924 60.0
BYD3_k127_2486485_2 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 494.0
BYD3_k127_2486485_3 sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 446.0
BYD3_k127_2486485_4 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006363 376.0
BYD3_k127_2486485_5 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 346.0
BYD3_k127_2486485_6 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005273 312.0
BYD3_k127_2486485_7 CHAT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001422 307.0
BYD3_k127_2486485_8 rna methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000008386 235.0
BYD3_k127_2486485_9 PFAM Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000005557 211.0
BYD3_k127_249926_0 TonB dependent receptor - - - 1.903e-295 937.0
BYD3_k127_249926_1 Pkd domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000509 595.0
BYD3_k127_249926_2 SusD family K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 308.0
BYD3_k127_249926_3 Two component regulator propeller - - - 0.000000000000000000000000000000000001878 141.0
BYD3_k127_2505827_0 Fibronectin type 3 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005122 553.0
BYD3_k127_2505827_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 469.0
BYD3_k127_2505827_2 prephenate dehydrogenase K00210 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008404 325.0
BYD3_k127_2505827_3 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 300.0
BYD3_k127_2505827_4 Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate K03785 - 4.2.1.10 0.000000000000000000000000000000000000000000000000001513 190.0
BYD3_k127_2505827_5 TPR repeat-containing protein - - - 0.00000000000007538 84.0
BYD3_k127_2505827_6 - - - - 0.000000005978 63.0
BYD3_k127_251013_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 400.0
BYD3_k127_2517927_0 CotH kinase protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009879 589.0
BYD3_k127_2517927_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009305 564.0
BYD3_k127_2517927_10 membrane - - - 0.000000000000000000000000000000000000000000000000007914 186.0
BYD3_k127_2517927_11 RDD family - - - 0.00000000000000000000000000000000000000000000002269 178.0
BYD3_k127_2517927_12 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000004319 138.0
BYD3_k127_2517927_13 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin - - - 0.000000000000000000000000000000000636 141.0
BYD3_k127_2517927_14 NlpC/P60 family K13694,K13695 - 3.4.17.13 0.00000000000000000000000000003316 123.0
BYD3_k127_2517927_15 Psort location CytoplasmicMembrane, score K00887,K00901 - 2.7.1.107,2.7.1.66 0.0000000000000000000000000005433 117.0
BYD3_k127_2517927_16 - - - - 0.0000000000454 72.0
BYD3_k127_2517927_17 Protein of unknown function (DUF2752) - - - 0.0001261 49.0
BYD3_k127_2517927_2 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 429.0
BYD3_k127_2517927_3 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003684 411.0
BYD3_k127_2517927_4 COG4452 Inner membrane protein involved in colicin E2 resistance K06143 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004843 408.0
BYD3_k127_2517927_5 Glucose / Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 339.0
BYD3_k127_2517927_6 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 329.0
BYD3_k127_2517927_7 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000004178 273.0
BYD3_k127_2517927_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000005715 237.0
BYD3_k127_2517927_9 Dihydrofolate reductase - - - 0.000000000000000000000000000000000000000000000000000000000003624 214.0
BYD3_k127_2542535_0 PFAM Metallopeptidase family M24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 523.0
BYD3_k127_2542535_1 CarboxypepD_reg-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 525.0
BYD3_k127_2542535_10 COG0457 FOG TPR repeat - - - 0.00000000000003662 82.0
BYD3_k127_2542535_2 Ser Thr phosphatase family protein K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007127 476.0
BYD3_k127_2542535_3 Epoxide hydrolase N terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000754 462.0
BYD3_k127_2542535_4 type I phosphodiesterase nucleotide pyrophosphatase - GO:0003674,GO:0003824,GO:0004035,GO:0004346,GO:0005488,GO:0005575,GO:0005623,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008877,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0042578,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0046872,GO:0046914,GO:0050308,GO:0050309,GO:0098519 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 470.0
BYD3_k127_2542535_5 Belongs to the phosphoglycerate mutase family K15634,K15640 - 5.4.2.12 0.00000000000000000000000000000000000000000000000001057 186.0
BYD3_k127_2542535_6 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000005013 159.0
BYD3_k127_2542535_7 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000008039 173.0
BYD3_k127_2542535_8 DNA-templated transcription, initiation - - - 0.00000000000000000000000000008332 123.0
BYD3_k127_2542535_9 Protein of unknown function (DUF2892) - - - 0.0000000000000003299 79.0
BYD3_k127_2553332_0 Dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 388.0
BYD3_k127_2553332_1 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000002133 193.0
BYD3_k127_2553332_2 - - - - 0.00000000000000000000000000000000000000000000004042 171.0
BYD3_k127_2553332_3 Fibronectin type 3 domain K12685,K16785,K16786,K16787 - - 0.0000000000000000000000000000001678 131.0
BYD3_k127_2599223_0 DALR_2 K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 8.211e-212 667.0
BYD3_k127_2599223_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004349 478.0
BYD3_k127_2599223_2 HAD-superfamily hydrolase subfamily IA, variant 3 K20866 - 3.1.3.10 0.0000000000000000000000000000000000000000008047 164.0
BYD3_k127_2599223_3 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000005856 114.0
BYD3_k127_2599223_4 - - - - 0.00000000000004272 80.0
BYD3_k127_2601025_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1119.0
BYD3_k127_2601025_1 Participates in both transcription termination and antitermination K02600 - - 7.921e-214 669.0
BYD3_k127_2601025_10 permease protein PstA K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004667 386.0
BYD3_k127_2601025_11 Pfam Phosphate-selective porin O and P - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 328.0
BYD3_k127_2601025_12 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657,K07658 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001487 265.0
BYD3_k127_2601025_13 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000008679 153.0
BYD3_k127_2601025_14 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000002174 117.0
BYD3_k127_2601025_2 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003471 597.0
BYD3_k127_2601025_3 ATPase histidine kinase DNA gyrase B HSP90 domain protein K02484,K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008698 493.0
BYD3_k127_2601025_4 SMART Metal-dependent phosphohydrolase, HD region K06885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008996 456.0
BYD3_k127_2601025_5 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 430.0
BYD3_k127_2601025_6 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006681 404.0
BYD3_k127_2601025_7 PBP superfamily domain K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008508 399.0
BYD3_k127_2601025_8 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 399.0
BYD3_k127_2601025_9 iron-sulfur cluster-binding protein K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 388.0
BYD3_k127_2607898_0 Peptidase M16C associated - - - 4.544e-311 980.0
BYD3_k127_2607898_1 hydrolase, family 8 K15531 - 3.2.1.156 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 486.0
BYD3_k127_2607898_2 Rhodanese-like domain K06917 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 310.0
BYD3_k127_2607898_3 - - - - 0.00000000000000000000002467 103.0
BYD3_k127_2607898_4 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000273 70.0
BYD3_k127_261045_0 PFAM ASPIC and UnbV - - - 0.0 1267.0
BYD3_k127_261045_1 PFAM ASPIC and UnbV - - - 0.0 1153.0
BYD3_k127_261045_2 ASPIC and UnbV - - - 6.233e-307 976.0
BYD3_k127_261045_3 PFAM Bacterial transcription activator, effector binding domain - - - 0.0000000000000000000000000000000000000000000000000000001183 206.0
BYD3_k127_261045_4 SMART Integrin alpha beta-propellor repeat protein - - - 0.000000000000000000000000000000000000000001239 169.0
BYD3_k127_261967_0 lysine biosynthetic process via aminoadipic acid - - - 2.069e-234 752.0
BYD3_k127_261967_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 463.0
BYD3_k127_2654165_0 TonB-dependent receptor - - - 7.724e-211 673.0
BYD3_k127_2654165_1 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009853 547.0
BYD3_k127_2654165_2 Large extracellular alpha-helical protein - - - 0.00000000000000000000000000000000000000000000000000000000004825 230.0
BYD3_k127_2654165_3 Domain of unknown function (DUF4249) - - - 0.00000000000000000000000000000000000000000000000000000000007219 218.0
BYD3_k127_2654165_4 Enterochelin esterase K07214 - - 0.000000000000000000000000327 108.0
BYD3_k127_273306_0 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002729 547.0
BYD3_k127_273306_1 Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007749 407.0
BYD3_k127_273306_2 UTP biosynthetic process - - - 0.00000000000000000000000000000003635 138.0
BYD3_k127_273306_3 Alpha/beta hydrolase of unknown function (DUF900) - - - 0.000000000000000000000000000000224 136.0
BYD3_k127_27394_0 Protein of unknown function (DUF1343) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008347 428.0
BYD3_k127_27394_1 Efflux ABC transporter, permease protein K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000796 418.0
BYD3_k127_27394_2 Putative porin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 323.0
BYD3_k127_27394_3 soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein K18691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002825 265.0
BYD3_k127_27394_4 Bacterial periplasmic substrate-binding proteins K18691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004765 243.0
BYD3_k127_27394_5 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000003014 232.0
BYD3_k127_27394_6 pfam nudix - - - 0.00000000000000000000000000000000000000000001643 168.0
BYD3_k127_27394_7 - - - - 0.000000000000000000000000000000000000002639 146.0
BYD3_k127_2778005_0 Peptidase family M3 K01284,K01414 - 3.4.15.5,3.4.24.70 1.874e-266 835.0
BYD3_k127_2778005_1 hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007207 370.0
BYD3_k127_2778005_2 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.0000000000000000000000000000000000000000000000002458 181.0
BYD3_k127_2778005_3 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000000000000472 81.0
BYD3_k127_2811512_0 PFAM ASPIC and UnbV - - - 5.492e-297 933.0
BYD3_k127_2811512_1 SusD family K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 443.0
BYD3_k127_2811512_2 PFAM ASPIC and UnbV - - - 0.0000000000000006976 79.0
BYD3_k127_2849078_0 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 504.0
BYD3_k127_2849078_1 glycosyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 372.0
BYD3_k127_2849078_2 GYD domain - - - 0.00000000000000000000000000000000000000000000000000000002127 199.0
BYD3_k127_2849078_3 GYD domain - - - 0.000000000000000000000000000000000000000000000000000001044 196.0
BYD3_k127_2849078_4 - - - - 0.0000000000000000000003138 98.0
BYD3_k127_2849078_5 Protein of unknown function (DUF3795) - - - 0.00000000000005152 77.0
BYD3_k127_2998501_0 amino acid K03294 - - 1.159e-218 692.0
BYD3_k127_2998501_1 OmpA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008619 454.0
BYD3_k127_2998501_2 AAA ATPase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005065 289.0
BYD3_k127_2998501_3 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004214 265.0
BYD3_k127_2998501_4 Sigma factor PP2C-like phosphatases - - - 0.0000000000000000000000000000000000000000000000000000000000000000002238 238.0
BYD3_k127_2998501_5 deoxyhypusine monooxygenase activity - - - 0.00000000000000000000000000000000000000000137 177.0
BYD3_k127_2998501_6 - - - - 0.00000000000000000000000000000001105 131.0
BYD3_k127_2998501_8 - - - - 0.00000000000000000007601 89.0
BYD3_k127_2998501_9 Serine threonine protein kinase - - - 0.000000000000757 82.0
BYD3_k127_3157898_0 L-rhamnose isomerase activity K00848,K01813 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0008270,GO:0008740,GO:0009056,GO:0009987,GO:0016043,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019299,GO:0019301,GO:0019318,GO:0019320,GO:0019321,GO:0019324,GO:0022607,GO:0030145,GO:0030246,GO:0032991,GO:0033296,GO:0036094,GO:0042802,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0046872,GO:0046914,GO:0048029,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901575 2.7.1.5,5.3.1.14 2.057e-224 700.0
BYD3_k127_3157898_1 HRDC domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009495 580.0
BYD3_k127_3157898_2 Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system) K02856 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0008645,GO:0015291,GO:0015293,GO:0015749,GO:0015762,GO:0016020,GO:0022804,GO:0022857,GO:0034219,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 432.0
BYD3_k127_3157898_3 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008429 295.0
BYD3_k127_3157898_4 rhamnose metabolic process K03534 - 5.1.3.32 0.00000000000000000000000000000000000000000005628 163.0
BYD3_k127_3172699_0 PFAM Alcohol dehydrogenase - - - 5.056e-216 674.0
BYD3_k127_3172699_1 DUF1338 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006026 284.0
BYD3_k127_3172699_2 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000001576 182.0
BYD3_k127_3239745_0 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P) K07094 - - 0.00000000000000000000000000000000000000000000000000000000000000006925 229.0
BYD3_k127_3239745_1 Domain of unknown function (DUF4924) - - - 0.00000000000000000000000000000000000000000000009769 173.0
BYD3_k127_3239745_2 Gliding motility-associated lipoprotein GldD - - - 0.0000000000000000000000000000000000000000008363 159.0
BYD3_k127_3239745_3 S4 RNA-binding domain K04762 - - 0.00000000000000000000000000000000002257 138.0
BYD3_k127_3239745_4 Belongs to the P-Pant transferase superfamily - - - 0.000000000000000000000000000000002174 136.0
BYD3_k127_325769_0 helix_turn_helix, arabinose operon control protein - - - 7.614e-321 1011.0
BYD3_k127_325769_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 2.555e-237 752.0
BYD3_k127_325769_10 PFAM Nitroreductase - - - 0.000000000000000000000000000000000000000000000000001172 187.0
BYD3_k127_325769_11 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000003422 187.0
BYD3_k127_325769_12 phosphohistidine phosphatase K08296 - - 0.00000000000000000000000000000000000007731 147.0
BYD3_k127_325769_13 ribosomal protein - - - 0.0000000000000000000000000000000000001368 147.0
BYD3_k127_325769_14 - - - - 0.00000000000002991 76.0
BYD3_k127_325769_2 PIN domain K07175 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000845 588.0
BYD3_k127_325769_3 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008877 448.0
BYD3_k127_325769_4 glycosyl transferase family 2 K07011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 404.0
BYD3_k127_325769_5 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003447 375.0
BYD3_k127_325769_6 Inositol monophosphatase family K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003684 302.0
BYD3_k127_325769_7 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 303.0
BYD3_k127_325769_8 Lipid A biosynthesis K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000001087 246.0
BYD3_k127_325769_9 Participates in the control of copper homeostasis K06201 - - 0.0000000000000000000000000000000000000000000000000000000001399 210.0
BYD3_k127_3266715_0 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005312 495.0
BYD3_k127_3266715_1 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 425.0
BYD3_k127_3266715_2 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004833 393.0
BYD3_k127_3266715_3 NeuB family K03856,K04516 - 2.5.1.54,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008691 350.0
BYD3_k127_3266715_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005383 333.0
BYD3_k127_3266715_5 oxidation-reduction process K18239,K18240 GO:0003674,GO:0003824,GO:0016787,GO:0016801,GO:0016803 3.3.2.13,4.1.3.40,4.1.3.45 0.00000000000000000000000000000000000000000000000002261 185.0
BYD3_k127_3266715_6 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000002547 106.0
BYD3_k127_3266715_7 Receptor family ligand-binding protein K01999 - - 0.000000002673 68.0
BYD3_k127_3303291_0 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 509.0
BYD3_k127_3303291_1 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006398 479.0
BYD3_k127_3303291_2 apolipoprotein N-acyltransferase K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 430.0
BYD3_k127_3303291_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 409.0
BYD3_k127_3303291_4 TIGRFAM hydrogenase expression formation protein HypD K04654 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007795 357.0
BYD3_k127_3303291_5 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 336.0
BYD3_k127_3303291_6 Exonuclease VII small subunit K03602 - 3.1.11.6 0.0000000000002312 73.0
BYD3_k127_332746_0 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 434.0
BYD3_k127_332746_1 Peptidase, M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006114 396.0
BYD3_k127_332746_2 Zinc ribbon domain protein K07164 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 307.0
BYD3_k127_332746_3 Putative undecaprenyl diphosphate synthase K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000001555 246.0
BYD3_k127_332746_4 PFAM Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000228 195.0
BYD3_k127_332746_5 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000000000000001487 175.0
BYD3_k127_332746_6 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000008696 130.0
BYD3_k127_332746_7 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000003092 61.0
BYD3_k127_3331442_0 Domain of unknown function K03737 - 1.2.7.1 0.0 1815.0
BYD3_k127_3331442_1 aconitate hydratase K01681 - 4.2.1.3 0.0 1139.0
BYD3_k127_3331442_10 TIGRFAM ComEC Rec2-related protein K02238 - - 0.0000000000000000000000000000000000000000000000000000002778 211.0
BYD3_k127_3331442_11 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000000000000003812 179.0
BYD3_k127_3331442_12 - - - - 0.00000000000000007806 88.0
BYD3_k127_3331442_13 COG3209 Rhs family protein - - - 0.000001991 59.0
BYD3_k127_3331442_14 Psort location CytoplasmicMembrane, score 10.00 K02238 - - 0.00002168 55.0
BYD3_k127_3331442_2 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 1.058e-215 675.0
BYD3_k127_3331442_3 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 3.736e-196 630.0
BYD3_k127_3331442_4 Sigma-70 region 3 K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008362 425.0
BYD3_k127_3331442_5 Dihydroorotate dehydrogenase K00226 - 1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009324 407.0
BYD3_k127_3331442_6 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 385.0
BYD3_k127_3331442_7 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 285.0
BYD3_k127_3331442_8 Telomere recombination - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006963 273.0
BYD3_k127_3331442_9 Polypeptide deformylase K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000001326 214.0
BYD3_k127_3334129_0 ribonuclease, Rne Rng family K08301 - - 2.433e-209 662.0
BYD3_k127_3334129_1 Transporter associated domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002336 444.0
BYD3_k127_3334129_2 A G-specific adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007621 372.0
BYD3_k127_3334129_3 COGs COG4299 conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000003284 229.0
BYD3_k127_3334129_4 Single-stranded DNA-binding protein K03111 - - 0.000000000000000000000000000000000000000000000000522 179.0
BYD3_k127_3334129_5 Belongs to the bacterial histone-like protein family K03530 - - 0.00000000000000000000000000000000000000000002657 162.0
BYD3_k127_3334129_6 TIGRFAM gliding motility-associated lipoprotein GldD - - - 0.000000000003539 69.0
BYD3_k127_3334129_7 - - - - 0.000001286 50.0
BYD3_k127_3348179_0 L-fucokinase - - - 0.0 1204.0
BYD3_k127_3348179_1 Mediates influx of magnesium ions K03284,K16074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 366.0
BYD3_k127_3348179_2 COGs COG1179 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 1 K22132 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007883 281.0
BYD3_k127_3348179_3 Acetyltransferase (GNAT) domain K03828 - - 0.00000000000000000000000000000000000000000000000000000000000001488 218.0
BYD3_k127_3348179_4 hydrolase, TatD K03424 - - 0.0000000000000000000000000000000000000001164 158.0
BYD3_k127_3348179_5 - - - - 0.000000000000000000000165 112.0
BYD3_k127_338993_0 short-chain dehydrogenase reductase SDR K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 494.0
BYD3_k127_338993_1 Capsule assembly protein Wzi - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 361.0
BYD3_k127_342022_0 Glycosyl hydrolase family 3 C-terminal domain K05349 - 3.2.1.21 0.0 1070.0
BYD3_k127_342022_1 Cellulase N-terminal ig-like domain - - - 8.259e-308 963.0
BYD3_k127_342022_2 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008942 597.0
BYD3_k127_342022_3 MFS/sugar transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004166 585.0
BYD3_k127_342022_4 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 510.0
BYD3_k127_342022_5 converts alpha-aldose to the beta-anomer - - - 0.0000000000000000000000000000000000000000000000000000000000000000003313 239.0
BYD3_k127_342022_7 - - - - 0.00000000000000000000003065 100.0
BYD3_k127_3427056_0 Domain of unknown function (DUF5110) K01811 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0016052,GO:0016787,GO:0016798,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899 3.2.1.177 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 501.0
BYD3_k127_3427056_1 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 498.0
BYD3_k127_3427056_2 PhoH family K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 389.0
BYD3_k127_3427056_3 S-adenosyl-l-methionine hydroxide adenosyltransferase - - - 0.0000000000000000000000000003887 116.0
BYD3_k127_3459474_0 GTP-binding protein LepA C-terminus K03596 - - 1.155e-304 942.0
BYD3_k127_3459474_1 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 0.0000000000000000000000000000000000000000000000000000000002807 204.0
BYD3_k127_3459474_2 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000382 163.0
BYD3_k127_3459474_3 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.00001653 53.0
BYD3_k127_3481750_0 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009023 490.0
BYD3_k127_3481750_1 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005793 491.0
BYD3_k127_3481750_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 305.0
BYD3_k127_3481750_3 HEAT repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000003297 237.0
BYD3_k127_3481750_4 - - - - 0.000000000000000000000000000000000000000000000000000000000002807 218.0
BYD3_k127_3481750_5 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000005763 89.0
BYD3_k127_3522145_0 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005165 610.0
BYD3_k127_3522145_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 557.0
BYD3_k127_3522145_10 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.00000000000002379 76.0
BYD3_k127_3522145_12 phosphorelay signal transduction system - - - 0.000000692 62.0
BYD3_k127_3522145_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 543.0
BYD3_k127_3522145_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008308 295.0
BYD3_k127_3522145_4 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000001641 201.0
BYD3_k127_3522145_5 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000004446 189.0
BYD3_k127_3522145_6 Psort location CytoplasmicMembrane, score K09793 - - 0.00000000000000000000000000000000000000000000002892 175.0
BYD3_k127_3522145_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000003092 173.0
BYD3_k127_3522145_8 Cysteine-rich secretory protein family - - - 0.0000000000000000000000000000006549 130.0
BYD3_k127_3522145_9 - - - - 0.00000000000000000004451 101.0
BYD3_k127_352420_0 cell adhesion involved in biofilm formation - - - 0.000000000000000000000000000000000000000000000000001223 210.0
BYD3_k127_352420_1 cell adhesion involved in biofilm formation - - - 0.0000000000000000000000000000000000000000000000001153 201.0
BYD3_k127_352420_2 C-terminal domain of CHU protein family - - - 0.00001181 59.0
BYD3_k127_3670711_0 PFAM TonB-dependent Receptor Plug Domain K02014 - - 5.471e-223 716.0
BYD3_k127_3670711_1 tRNA nucleotidyltransferase poly(A) polymerase K00970,K00974 - 2.7.7.19,2.7.7.72 5.553e-204 644.0
BYD3_k127_3670711_2 SNF2 family N-terminal domain K08282 - 2.7.11.1 6.004e-199 641.0
BYD3_k127_3672900_0 protein conserved in bacteria - - - 4.551e-196 620.0
BYD3_k127_3672900_1 ABC-type Mn2 Zn2 transport systems permease components K11709 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007439 501.0
BYD3_k127_3672900_2 Putative glucoamylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004178 452.0
BYD3_k127_3672900_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005742 372.0
BYD3_k127_3672900_4 signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 334.0
BYD3_k127_3672900_5 ABC 3 transport family K11708 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002429 242.0
BYD3_k127_3672900_6 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000002475 158.0
BYD3_k127_368114_0 Putative collagen-binding domain of a collagenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009853 529.0
BYD3_k127_368114_1 Oxidoreductase NAD-binding domain protein K13327,K22230 - 1.1.1.384 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008249 503.0
BYD3_k127_368114_2 Sugar transport protein K05340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005453 423.0
BYD3_k127_368114_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 401.0
BYD3_k127_368114_4 Phosphogluconate dehydrogenase (decarboxylating) C-term - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 345.0
BYD3_k127_368114_5 helix_turn_helix gluconate operon transcriptional repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 293.0
BYD3_k127_368114_6 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001495 279.0
BYD3_k127_368114_7 - - - - 0.000000000000000004666 84.0
BYD3_k127_3729742_0 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008743 558.0
BYD3_k127_3729742_1 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006997 343.0
BYD3_k127_3729742_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000001835 128.0
BYD3_k127_3801266_0 AcrB/AcrD/AcrF family K07787 - - 0.0 1289.0
BYD3_k127_3801266_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 546.0
BYD3_k127_3801266_2 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 439.0
BYD3_k127_3801266_3 Transporter associated domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000004674 209.0
BYD3_k127_3931336_0 CarboxypepD_reg-like domain - - - 2.451e-234 748.0
BYD3_k127_3931336_1 COG NOG38984 non supervised orthologous group - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005848 274.0
BYD3_k127_3931336_2 Biogenesis protein - - - 0.000000000000000000000000000000000000000000000000000000000001169 215.0
BYD3_k127_3931336_3 ABC-2 type transporter - - - 0.00000000000000000000000000000000000000000000002197 182.0
BYD3_k127_3931336_4 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.0000000000000000000000000000001784 127.0
BYD3_k127_3984270_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1078.0
BYD3_k127_3984270_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 8.09e-209 671.0
BYD3_k127_3984270_2 ABC-type transport system involved in multi-copper enzyme maturation permease component - - - 2.289e-203 673.0
BYD3_k127_3984270_3 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 487.0
BYD3_k127_3984270_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005548 429.0
BYD3_k127_3984270_5 ABC-type multidrug transport system ATPase component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004255 398.0
BYD3_k127_3984270_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 353.0
BYD3_k127_3992449_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002799 445.0
BYD3_k127_3992449_1 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 451.0
BYD3_k127_3992449_2 Aminotransferase class IV K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000004127 205.0
BYD3_k127_3992449_3 energy transducer activity K03646,K03832 - - 0.00000000000000000002003 100.0
BYD3_k127_4012697_0 - - - - 0.0 1097.0
BYD3_k127_4012697_1 Galactokinase galactose-binding signature K00849 - 2.7.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003754 595.0
BYD3_k127_4012697_2 Aspartate-ammonia ligase K01914 - 6.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006808 449.0
BYD3_k127_4012697_3 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 404.0
BYD3_k127_4012697_4 Transporter, major facilitator family protein K02429 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002799 390.0
BYD3_k127_4012697_5 Belongs to the serpin family K13963 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 380.0
BYD3_k127_4015673_0 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 459.0
BYD3_k127_4015673_1 Immunoglobulin - - - 0.0000000000000000000000000000000000000000000000007366 197.0
BYD3_k127_4015673_2 TIGRFAM Bacteroidetes-specific - - - 0.000000000000000000000000000002133 130.0
BYD3_k127_4095649_0 - - - - 6.381e-195 629.0
BYD3_k127_4095649_1 Cleaves the N-terminal amino acid of tripeptides K01258 - 3.4.11.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 529.0
BYD3_k127_4095649_2 Transmembrane secretion effector K08217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006542 439.0
BYD3_k127_4095649_3 Lipoate-protein ligase K03800 - 6.3.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000003052 271.0
BYD3_k127_4095649_4 PFAM nitroreductase - - - 0.000000000000000000000000000000000000000000000000000001863 196.0
BYD3_k127_4095649_5 TraB family K09973 - - 0.00000000000000000000000000000000003066 145.0
BYD3_k127_4095649_6 - - - - 0.000006428 56.0
BYD3_k127_4104980_0 RNB K12573,K12585 - - 3.569e-265 834.0
BYD3_k127_4104980_1 TIGRFAM capsular exopolysaccharide family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004531 615.0
BYD3_k127_4104980_10 Domain of unknown function (DUF1987) - - - 0.00000000000000000001993 95.0
BYD3_k127_4104980_11 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000007308 68.0
BYD3_k127_4104980_2 PFAM Nucleoside recognition K06373 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 547.0
BYD3_k127_4104980_3 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006157 340.0
BYD3_k127_4104980_4 Zinc transporter zupT K07238 GO:0000041,GO:0003674,GO:0005215,GO:0005381,GO:0005384,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006824,GO:0006826,GO:0006828,GO:0006829,GO:0008150,GO:0008324,GO:0015075,GO:0015086,GO:0015087,GO:0015093,GO:0015318,GO:0015684,GO:0015691,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0034755,GO:0044464,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070574,GO:0070838,GO:0071421,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:1903874 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007514 309.0
BYD3_k127_4104980_5 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001267 276.0
BYD3_k127_4104980_6 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000005591 197.0
BYD3_k127_4104980_7 COGs COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) - - - 0.00000000000000000000000000000000000000000000000000004625 192.0
BYD3_k127_4104980_8 AMP binding - - - 0.000000000000000000000000000000005698 139.0
BYD3_k127_4104980_9 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000002858 104.0
BYD3_k127_413306_0 Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000597 326.0
BYD3_k127_413306_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000004425 236.0
BYD3_k127_413306_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000006257 146.0
BYD3_k127_4150678_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 1.786e-263 821.0
BYD3_k127_4150678_1 tRNA (Uracil-5-)-methyltransferase K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006673 597.0
BYD3_k127_4150678_10 - - - - 0.0004956 52.0
BYD3_k127_4150678_2 ABC-type uncharacterized transport system K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000878 457.0
BYD3_k127_4150678_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005903 360.0
BYD3_k127_4150678_4 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 357.0
BYD3_k127_4150678_5 Isopentenyl transferase K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 357.0
BYD3_k127_4150678_6 TIGRFAM Gliding motility-associated ABC transporter permease protein GldF K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001552 272.0
BYD3_k127_4150678_7 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000000000000000000000000000000000000000001224 188.0
BYD3_k127_4150678_8 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000005362 192.0
BYD3_k127_4150678_9 MORN repeat variant - - - 0.000000000000000006471 94.0
BYD3_k127_4172550_0 Glycosyl hydrolase family 3 N terminal domain - - - 1.754e-280 894.0
BYD3_k127_4172550_1 Oxidoreductase NAD-binding domain protein K16044 - 1.1.1.371 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008529 365.0
BYD3_k127_4172550_2 ABC-2 type transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004047 282.0
BYD3_k127_4172550_3 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.000000000000000000000000000000000000000000000000000000000000006301 222.0
BYD3_k127_4172550_4 Putative Fe-S cluster - - - 0.00000000000000000000000000000000000000000000000000000004338 204.0
BYD3_k127_4172550_5 Thioredoxin-like [2Fe-2S] ferredoxin - - - 0.00000000000000000001687 94.0
BYD3_k127_4221303_0 domain protein - - - 1.201e-202 642.0
BYD3_k127_4221303_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003671 531.0
BYD3_k127_4221303_2 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 413.0
BYD3_k127_4221303_3 Bacterial regulatory proteins, crp family K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006916 281.0
BYD3_k127_4221303_4 ComF family K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000007583 229.0
BYD3_k127_4221303_5 OsmC-like protein K07397 - - 0.0000000000000000000000000000000000000000000000008973 178.0
BYD3_k127_4221303_6 Hydrolase, P-loop family K06925 - - 0.000000000000000000000000000000000000003381 150.0
BYD3_k127_4221303_7 TIGRFAM Bacteroidetes-specific - - - 0.0000000000000000000000000000005166 126.0
BYD3_k127_4221303_8 methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000001733 126.0
BYD3_k127_4221303_9 Zinc transporter K07238 - - 0.00000000000005362 72.0
BYD3_k127_4262938_0 Belongs to the glycosyl hydrolase 43 family - - - 5.996e-298 922.0
BYD3_k127_4262938_1 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 358.0
BYD3_k127_4262938_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005019 325.0
BYD3_k127_4262938_3 Beta galactosidase small chain K01190 - 3.2.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001121 273.0
BYD3_k127_4262938_4 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000002054 192.0
BYD3_k127_4262938_5 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000002545 175.0
BYD3_k127_4262938_6 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000001052 123.0
BYD3_k127_4262938_7 Magnesium chelatase, subunit ChlI - - - 0.0000000000000000001272 92.0
BYD3_k127_432379_0 Aldehyde dehydrogenase family K00294,K13821 - 1.2.1.88,1.5.5.2 1.499e-250 782.0
BYD3_k127_432379_1 Peptidase family C25 - - - 3.885e-242 788.0
BYD3_k127_432379_2 TIGRFAM gliding motility-associated lipoprotein GldJ - - - 9.412e-215 677.0
BYD3_k127_432379_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 402.0
BYD3_k127_432379_4 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008494 305.0
BYD3_k127_432379_5 Psort location OuterMembrane, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002335 298.0
BYD3_k127_432379_6 Type IX secretion system membrane protein PorP/SprF - - - 0.000000000000000000000000000000000993 142.0
BYD3_k127_432379_7 Septum formation initiator - - - 0.0000000000000000000015 98.0
BYD3_k127_4379508_0 Belongs to the glycosyl hydrolase 2 family K01190 - 3.2.1.23 6.406e-262 830.0
BYD3_k127_4379508_1 2Fe-2S iron-sulfur cluster binding domain K00351 - 1.6.5.8 7.077e-197 620.0
BYD3_k127_4379508_10 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004242 246.0
BYD3_k127_4379508_11 Putative serine esterase (DUF676) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001215 249.0
BYD3_k127_4379508_12 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00348 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000001546 243.0
BYD3_k127_4379508_13 Bacterial capsule synthesis protein K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000003698 229.0
BYD3_k127_4379508_14 Domain of unknown function (DUF5103) - - - 0.0000000000000000000000000000000000000000000000003028 185.0
BYD3_k127_4379508_15 Domain of unknown function (DUF5103) - - - 0.0000000000000000000000000000000005955 136.0
BYD3_k127_4379508_16 - - - - 0.000000000000000000000000000239 125.0
BYD3_k127_4379508_17 Belongs to the Fur family K09825 - - 0.000000000000000000000000000499 118.0
BYD3_k127_4379508_18 PFAM Penicillinase repressor - - - 0.00000000000000000000000587 103.0
BYD3_k127_4379508_2 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 546.0
BYD3_k127_4379508_3 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 494.0
BYD3_k127_4379508_4 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000633 414.0
BYD3_k127_4379508_5 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 344.0
BYD3_k127_4379508_6 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00350 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 306.0
BYD3_k127_4379508_7 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 299.0
BYD3_k127_4379508_8 Rnf-Nqr subunit, membrane protein K00349 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005768 291.0
BYD3_k127_4379508_9 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003261 276.0
BYD3_k127_4385078_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1649.0
BYD3_k127_4385078_1 TonB-dependent receptor - - - 9.594e-217 698.0
BYD3_k127_4385078_2 Domain of unknown function (DUF4301) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 541.0
BYD3_k127_4385078_3 GIY-YIG type nucleases (URI domain) K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004545 494.0
BYD3_k127_4385078_4 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00651 - 2.3.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003747 462.0
BYD3_k127_4385078_5 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 389.0
BYD3_k127_4385078_6 Histidine Phosphotransfer domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008552 384.0
BYD3_k127_4385078_7 CoA-binding domain K13012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001183 265.0
BYD3_k127_4385078_8 CarboxypepD_reg-like domain - - - 0.000000000000000000000003969 110.0
BYD3_k127_4385078_9 - - - - 0.00000000001069 72.0
BYD3_k127_439234_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1103.0
BYD3_k127_439234_1 glucose-1-phosphate thymidylyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003117 432.0
BYD3_k127_439234_2 Phosphoribosyl transferase domain K00762,K13421 - 2.4.2.10,4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001545 280.0
BYD3_k127_439234_3 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008068 274.0
BYD3_k127_439234_4 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000000001613 205.0
BYD3_k127_439234_5 NUDIX domain - - - 0.0000000000000000000000000000000000000000000000001022 183.0
BYD3_k127_439234_6 50S ribosomal protein L31 type B K02909 - - 0.000000000000000000000000000000000000000909 149.0
BYD3_k127_439234_7 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000001939 67.0
BYD3_k127_4413580_0 Acylphosphatase K04656 - - 4.828e-225 720.0
BYD3_k127_4413580_1 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008829 505.0
BYD3_k127_4413580_2 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.00000000000000000000000000000000000000000000000004986 185.0
BYD3_k127_4413580_3 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000004324 179.0
BYD3_k127_4413580_4 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K18005 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 0.000000000000000000000000000000000000000002231 162.0
BYD3_k127_4413580_5 - - - - 0.000000000000000000000008404 114.0
BYD3_k127_4413580_7 Hydrogenase assembly chaperone hypC hupF K04653 - - 0.00000000000000009603 82.0
BYD3_k127_4413580_8 Belongs to the HypD family K04654 - - 0.00000000003664 64.0
BYD3_k127_4413580_9 - - - - 0.0000000001098 68.0
BYD3_k127_441686_0 PSP1 C-terminal conserved region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 467.0
BYD3_k127_441686_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004114 414.0
BYD3_k127_441686_10 Cell wall-active antibiotics response 4TMS YvqF - - - 0.000000000000000000000000000000000000000000000009874 180.0
BYD3_k127_441686_11 6-O-methylguanine DNA methyltransferase, DNA binding domain protein K00567,K07443 - 2.1.1.63 0.00000000000000000000000000000000000000000002992 164.0
BYD3_k127_441686_12 Gliding motility-associated lipoprotein, GldH - GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006040,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0017144,GO:0040011,GO:0042737,GO:0043170,GO:0044237,GO:0044248,GO:0046348,GO:0048870,GO:0051179,GO:0051674,GO:0071704,GO:0071976,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000008546 109.0
BYD3_k127_441686_13 PFAM nitrogen-fixing NifU domain protein - - - 0.000000000000000000006238 94.0
BYD3_k127_441686_14 Predicted permease K07089 - - 0.000000000005028 68.0
BYD3_k127_441686_15 - - - - 0.00005327 53.0
BYD3_k127_441686_2 phosphoglycerate mutase activity K01834 GO:0001871,GO:0003674,GO:0003824,GO:0004619,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009986,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0030246,GO:0030247,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031,GO:2001065 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000314 398.0
BYD3_k127_441686_3 Bacterial Ig-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 342.0
BYD3_k127_441686_4 COG2812 DNA polymerase III gamma tau subunits K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000411 331.0
BYD3_k127_441686_5 cation diffusion facilitator family transporter K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 323.0
BYD3_k127_441686_6 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007631 284.0
BYD3_k127_441686_7 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003855 289.0
BYD3_k127_441686_8 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005185 287.0
BYD3_k127_441686_9 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005783 276.0
BYD3_k127_4424428_0 phosphorylase K00691 - 2.4.1.8 7.952e-311 969.0
BYD3_k127_4424428_1 Belongs to the glycosyl hydrolase 31 family K01811 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0016052,GO:0016787,GO:0016798,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899 3.2.1.177 2.262e-262 822.0
BYD3_k127_4424428_2 F5 8 type C domain protein K01206 - 3.2.1.51 1.689e-230 723.0
BYD3_k127_4424428_3 Belongs to the glycosyl hydrolase 13 family K21575 - 3.2.1.135 6.588e-217 689.0
BYD3_k127_4424428_4 Major facilitator Superfamily K16211 - - 4.516e-211 667.0
BYD3_k127_4424428_5 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K01838 - 5.4.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000003939 255.0
BYD3_k127_4424428_6 Fibronectin type III-like domain K05349 - 3.2.1.21 0.000000000000000000000000000002815 125.0
BYD3_k127_4489306_0 response regulator, receiver K13924 - 2.1.1.80,3.1.1.61 2.87e-235 781.0
BYD3_k127_4489306_1 Pfam:KaiC K08482 - - 7.847e-194 616.0
BYD3_k127_4489306_2 unsaturated chondroitin disaccharide hydrolase activity K15532 - 3.2.1.172 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008015 328.0
BYD3_k127_4489306_3 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 288.0
BYD3_k127_4489306_4 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000008964 214.0
BYD3_k127_4489306_5 KaiB K08481 - - 0.00000000000000000000000000000000000009137 144.0
BYD3_k127_4489306_6 KaiB domain K08481 - - 0.000000000000000000000000000001373 124.0
BYD3_k127_4489306_7 - - - - 0.000000000000000000001196 103.0
BYD3_k127_4541635_0 Major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005562 437.0
BYD3_k127_4541635_1 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000006181 242.0
BYD3_k127_4541635_2 PFAM RNA polymerase sigma factor 70, region 4 type 2 K03088 - - 0.000000000000000000000000000000000000000000000000000000004202 204.0
BYD3_k127_4541635_3 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000000000000000000002085 118.0
BYD3_k127_4541635_5 Protein of unknown function, DUF393 - - - 0.000000000000001362 82.0
BYD3_k127_4541635_6 - - - - 0.00000000000032 81.0
BYD3_k127_4553910_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 5.777e-252 791.0
BYD3_k127_4553910_1 iron-nicotianamine transmembrane transporter activity - GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0008150,GO:0016020,GO:0022857,GO:0051179,GO:0051234,GO:0055085 - 5.018e-249 784.0
BYD3_k127_4553910_10 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007439 389.0
BYD3_k127_4553910_11 DHH family K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005315 334.0
BYD3_k127_4553910_12 (2R)-phospho-3-sulfolactate synthase (ComA) K08097 - 4.4.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004108 313.0
BYD3_k127_4553910_13 PFAM Shikimate dehydrogenase substrate binding K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004401 283.0
BYD3_k127_4553910_14 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007217 274.0
BYD3_k127_4553910_15 Uroporphyrin-III C tetrapyrrole (Corrin Porphyrin) methyltransferase K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000004051 244.0
BYD3_k127_4553910_16 PFAM Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000003436 212.0
BYD3_k127_4553910_17 pilus organization - - - 0.0000000000000000000000000000000000000000000001122 179.0
BYD3_k127_4553910_18 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000002136 166.0
BYD3_k127_4553910_19 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.0000000000000000000000000000000000000001682 155.0
BYD3_k127_4553910_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 2.749e-221 692.0
BYD3_k127_4553910_20 Peptidyl-prolyl cis-trans isomerase K01802,K03767 - 5.2.1.8 0.00000000000000000000000000000002203 137.0
BYD3_k127_4553910_21 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000000000005678 128.0
BYD3_k127_4553910_22 Rubredoxin - - - 0.00000000000000000000000003741 108.0
BYD3_k127_4553910_23 Winged helix-turn-helix DNA-binding - - - 0.00000000000001724 74.0
BYD3_k127_4553910_24 Peptidyl-prolyl cis-trans isomerase K03772 - 5.2.1.8 0.000001856 54.0
BYD3_k127_4553910_3 COGs COG0471 Di- and tricarboxylate transporter - - - 5.763e-203 647.0
BYD3_k127_4553910_4 Xaa-His dipeptidase K01270 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 588.0
BYD3_k127_4553910_5 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 509.0
BYD3_k127_4553910_6 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 523.0
BYD3_k127_4553910_7 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004501 446.0
BYD3_k127_4553910_8 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 404.0
BYD3_k127_4553910_9 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005886 407.0
BYD3_k127_4573512_0 lysine biosynthetic process via aminoadipic acid - - - 7.753e-202 642.0
BYD3_k127_4585104_0 Psort location Cytoplasmic, score K00027,K00029 - 1.1.1.38,1.1.1.40 1.635e-288 900.0
BYD3_k127_4585104_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 2.4e-279 873.0
BYD3_k127_4585104_10 regulation of RNA biosynthetic process - - - 0.00000000000000000000000001252 115.0
BYD3_k127_4585104_11 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000000000000002327 111.0
BYD3_k127_4585104_13 PFAM Outer membrane efflux protein - - - 0.000000000001079 75.0
BYD3_k127_4585104_2 Deoxyhypusine synthase K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 544.0
BYD3_k127_4585104_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008348 364.0
BYD3_k127_4585104_4 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 354.0
BYD3_k127_4585104_5 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008223 334.0
BYD3_k127_4585104_6 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 329.0
BYD3_k127_4585104_7 Endonuclease exonuclease phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001266 291.0
BYD3_k127_4585104_8 Cation efflux family - - - 0.00000000000000000000000000000000000000000000000000000000000000000704 231.0
BYD3_k127_4585104_9 Excinuclease ABC subunit B - - - 0.000000000000000000000000000000000000000000000000000000952 202.0
BYD3_k127_4590696_0 Fn3 associated K12373 - 3.2.1.52 7.627e-293 909.0
BYD3_k127_4590696_1 WD40-like Beta Propeller Repeat - - - 1.345e-225 708.0
BYD3_k127_4590696_10 thioesterase K19222 - 3.1.2.28 0.0000000000000000000000000000000002025 136.0
BYD3_k127_4590696_11 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000001505 105.0
BYD3_k127_4590696_12 Protein of unknown function (DUF1566) - - - 0.00004446 54.0
BYD3_k127_4590696_2 Glycosyl hydrolase family 92 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 503.0
BYD3_k127_4590696_3 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) K01661 - 4.1.3.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 475.0
BYD3_k127_4590696_4 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007244 392.0
BYD3_k127_4590696_5 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 372.0
BYD3_k127_4590696_6 Mandelate racemase muconate lactonizing enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008632 360.0
BYD3_k127_4590696_7 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000237 297.0
BYD3_k127_4590696_8 O-succinylbenzoic acid--CoA ligase K01911 - 6.2.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000001215 260.0
BYD3_k127_4590696_9 chorismate binding enzyme K01851,K02361,K02552 - 5.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000002769 252.0
BYD3_k127_4606787_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005569 497.0
BYD3_k127_4606787_1 ROK family K00886 - 2.7.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003207 306.0
BYD3_k127_4606787_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005903 302.0
BYD3_k127_4612973_0 Glycosyltransferase, group 2 family protein K07011 - - 4.469e-212 678.0
BYD3_k127_4612973_1 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005939 390.0
BYD3_k127_4612973_11 Ami_3 K01448 - 3.5.1.28 0.0001876 54.0
BYD3_k127_4612973_2 OmpA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002195 299.0
BYD3_k127_4612973_3 OmpA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005578 288.0
BYD3_k127_4612973_4 OmpA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001058 264.0
BYD3_k127_4612973_5 OmpA family - - - 0.0000000000000000000000000000000000000000000000000000000000000006367 235.0
BYD3_k127_4612973_6 Acetyltransferase (GNAT) domain K00657 - 2.3.1.57 0.00000000000000000000000000000000000000000000000000000000003124 210.0
BYD3_k127_4612973_7 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000000000000000000000000002084 171.0
BYD3_k127_4612973_8 G-rich domain on putative tyrosine kinase - - - 0.00000000001273 70.0
BYD3_k127_4612973_9 Tetratricopeptide repeat - - - 0.00000001583 59.0
BYD3_k127_4632394_0 magnesium chelatase K07391 - - 6.135e-245 764.0
BYD3_k127_4632394_1 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 465.0
BYD3_k127_4632394_2 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005574 409.0
BYD3_k127_4632394_3 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000003444 227.0
BYD3_k127_4632394_4 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000058 182.0
BYD3_k127_4632394_5 Haem-binding domain - - - 0.000000000000000000000000000000000001189 143.0
BYD3_k127_4633645_0 aldo keto reductase family K19265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 499.0
BYD3_k127_4633645_1 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000001167 239.0
BYD3_k127_4633645_2 Domain of unknown function (DUF1987) - - - 0.00000000000000000000000000000000000002838 146.0
BYD3_k127_4633645_3 UTP biosynthetic process - - - 0.00001962 50.0
BYD3_k127_4635168_0 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 0.0 1133.0
BYD3_k127_4635168_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 536.0
BYD3_k127_4635168_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 516.0
BYD3_k127_4635168_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 509.0
BYD3_k127_4635168_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000029 286.0
BYD3_k127_4635168_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000002132 149.0
BYD3_k127_4635168_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.000000000000000000000000000001934 124.0
BYD3_k127_4635168_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000009005 81.0
BYD3_k127_4648196_0 PFAM ASPIC and UnbV - - - 1.635e-276 874.0
BYD3_k127_4752907_0 Ribonucleotide reductase, barrel domain K00525 - 1.17.4.1 0.0 1315.0
BYD3_k127_4752907_1 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 GO:0000302,GO:0003674,GO:0003824,GO:0004601,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016661,GO:0016684,GO:0042221,GO:0042493,GO:0042542,GO:0046677,GO:0050418,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1990748 1.7.99.1 3.967e-250 782.0
BYD3_k127_4752907_10 Cupin domain protein - - - 0.0000000000000000000000000000001436 126.0
BYD3_k127_4752907_11 Putative auto-transporter adhesin, head GIN domain - - - 0.000000000000000000000000004721 120.0
BYD3_k127_4752907_12 alpha beta - - - 0.00000000000000000000000007682 121.0
BYD3_k127_4752907_13 endonuclease containing a URI domain K07461 - - 0.0000000000000000003478 89.0
BYD3_k127_4752907_15 Type IV pilus biogenesis stability protein PilW - - - 0.000000000000007758 76.0
BYD3_k127_4752907_16 Bacterial Ig-like domain 2 - - - 0.0000000001669 73.0
BYD3_k127_4752907_17 Site-specific recombinase, DNA invertase Pin - - - 0.000004673 49.0
BYD3_k127_4752907_2 tail specific protease K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008736 477.0
BYD3_k127_4752907_3 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008062 396.0
BYD3_k127_4752907_4 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 390.0
BYD3_k127_4752907_5 Methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000032 244.0
BYD3_k127_4752907_6 Cytidine and deoxycytidylate deaminase zinc-binding region K01493 - 3.5.4.12 0.00000000000000000000000000000000000000000000000000000000000000002913 225.0
BYD3_k127_4752907_7 Crp-like helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000002161 207.0
BYD3_k127_4752907_8 Belongs to the UPF0145 family - - - 0.00000000000000000000000000000000000000000000008354 170.0
BYD3_k127_4752907_9 elongation factor G K02355 - - 0.00000000000000000000000000000000008283 134.0
BYD3_k127_4815600_0 ATP-grasp domain K09181 - - 5.815e-287 896.0
BYD3_k127_4815600_1 AMP-binding enzyme C-terminal domain K01912 - 6.2.1.30 1.248e-223 699.0
BYD3_k127_4815600_10 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006816 342.0
BYD3_k127_4815600_11 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 319.0
BYD3_k127_4815600_12 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007387 309.0
BYD3_k127_4815600_13 epimerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 293.0
BYD3_k127_4815600_14 Pyruvate ferredoxin/flavodoxin oxidoreductase K00177 - 1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006536 290.0
BYD3_k127_4815600_15 lactate metabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007851 288.0
BYD3_k127_4815600_16 PFAM NADH ubiquinone K18007 - 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000102 261.0
BYD3_k127_4815600_17 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001194 267.0
BYD3_k127_4815600_18 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000003355 249.0
BYD3_k127_4815600_19 4Fe-4S single cluster domain K18006 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000003609 253.0
BYD3_k127_4815600_2 Domain of unknown function (DUF4070) - - - 7.927e-222 697.0
BYD3_k127_4815600_20 Glutathione peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000001369 214.0
BYD3_k127_4815600_21 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000009546 211.0
BYD3_k127_4815600_22 heme oxygenase K21480 GO:0003674,GO:0003824,GO:0004392,GO:0005488,GO:0005575,GO:0006725,GO:0006778,GO:0006787,GO:0006788,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016020,GO:0016491,GO:0016705,GO:0019439,GO:0020037,GO:0033013,GO:0033015,GO:0034641,GO:0042167,GO:0042168,GO:0042440,GO:0042592,GO:0044237,GO:0044248,GO:0044270,GO:0046149,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0048878,GO:0050801,GO:0050896,GO:0051186,GO:0051187,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:0097159,GO:0098771,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575 1.14.15.20 0.0000000000000000000000000000000000000000000000001399 183.0
BYD3_k127_4815600_23 ACT domain protein - - - 0.000000000000000000000000000000000000000000000001473 177.0
BYD3_k127_4815600_24 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000000001442 177.0
BYD3_k127_4815600_25 - - - - 0.00000000000000000000000000000000000000000000009793 179.0
BYD3_k127_4815600_26 - - - - 0.000000000000000000000000000000000000000003053 160.0
BYD3_k127_4815600_28 Protein of unknown function (DUF1697) - - - 0.0000000000000000000000000000000000000004319 153.0
BYD3_k127_4815600_29 YjbR - - - 0.00000000000000000000000000000000000006608 144.0
BYD3_k127_4815600_3 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00436 - 1.12.1.2 3.936e-199 631.0
BYD3_k127_4815600_31 4Fe-4S binding domain K00176 - 1.2.7.3 0.0000000000000000000000000000004274 123.0
BYD3_k127_4815600_32 hydrogenase maturation protease - - - 0.0000000000000000000000000005699 118.0
BYD3_k127_4815600_33 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000000000000997 107.0
BYD3_k127_4815600_34 PFAM Spore coat protein CotH - - - 0.00000000000000000222 98.0
BYD3_k127_4815600_35 Cold shock - - - 0.000004904 51.0
BYD3_k127_4815600_36 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.00001479 50.0
BYD3_k127_4815600_4 Aminotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007666 540.0
BYD3_k127_4815600_5 Catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009661 512.0
BYD3_k127_4815600_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K18005 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 438.0
BYD3_k127_4815600_7 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004486 429.0
BYD3_k127_4815600_8 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 379.0
BYD3_k127_4815600_9 fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 364.0
BYD3_k127_4895339_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1135.0
BYD3_k127_4895339_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 6.976e-316 994.0
BYD3_k127_4895339_10 Diacylglycerol kinase catalytic domain (presumed) - - - 0.00000000000000000000000000000000000000000000000000000000000000003633 233.0
BYD3_k127_4895339_11 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) K15460 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016426,GO:0016430,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.223 0.00000000000000000000000000000000000000000000000000002043 196.0
BYD3_k127_4895339_12 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.00000000000000000000000000000000000000000000000001022 189.0
BYD3_k127_4895339_13 Predicted membrane protein (DUF2243) - - - 0.00000000000000000000000000000000000000000000002095 174.0
BYD3_k127_4895339_14 - - - - 0.000000000000000000000000000000000000000000000106 172.0
BYD3_k127_4895339_15 SNARE-like domain protein - - - 0.0000000000000000000000000000000000000001424 155.0
BYD3_k127_4895339_16 mttA/Hcf106 family K03116 - - 0.00000000000000001974 86.0
BYD3_k127_4895339_2 Glycosyl hydrolases family 15 - - - 8.166e-274 853.0
BYD3_k127_4895339_3 PFAM glycoside hydrolase 15-related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 548.0
BYD3_k127_4895339_4 Glucose dehydrogenase C-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006992 433.0
BYD3_k127_4895339_5 NAD(P)H-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 420.0
BYD3_k127_4895339_6 TIGR02757 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006873 312.0
BYD3_k127_4895339_7 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006514 306.0
BYD3_k127_4895339_8 tRNA pseudouridine synthase activity K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008841 279.0
BYD3_k127_4895339_9 Uncharacterized conserved protein (DUF2183) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001365 274.0
BYD3_k127_4930419_0 Cysteine desulfurase K09014 - - 8.418e-264 817.0
BYD3_k127_4930419_1 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 544.0
BYD3_k127_4930419_2 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006135 516.0
BYD3_k127_4930419_3 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 457.0
BYD3_k127_4930419_4 FeS assembly protein SufD K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 457.0
BYD3_k127_4930419_5 ATPases associated with a variety of cellular activities K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 400.0
BYD3_k127_4930419_6 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 348.0
BYD3_k127_4930419_7 SufE protein probably involved in Fe-S center assembly K02426 - - 0.00000000000000000000000000000000000000000000000000000005089 198.0
BYD3_k127_4930419_8 Pfam:DUF59 - - - 0.0000000000000000000000000000000001137 136.0
BYD3_k127_493785_0 COG4624 Iron only hydrogenase large subunit C-terminal domain K00123,K18332 - 1.12.1.3,1.17.1.9 1.198e-303 938.0
BYD3_k127_493785_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335,K18331 - 1.12.1.3,1.6.5.3 1.402e-301 933.0
BYD3_k127_493785_10 DRTGG domain - - - 0.00000000000000000000000000000007613 128.0
BYD3_k127_493785_11 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.000000000000000001377 86.0
BYD3_k127_493785_2 Putative Fe-S cluster - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 467.0
BYD3_k127_493785_3 Thioredoxin-like [2Fe-2S] ferredoxin K18330 - 1.12.1.3 0.000000000000000000000000000000000000000000000000000000000000000000002399 236.0
BYD3_k127_493785_4 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000000001118 235.0
BYD3_k127_493785_5 Hydrogenase nickel incorporation protein HypB K04652 - - 0.0000000000000000000000000000000000000000000000000000000000563 207.0
BYD3_k127_493785_6 Ferredoxin K17992 - 1.12.1.3 0.00000000000000000000000000000000000000000000000000001124 191.0
BYD3_k127_493785_7 Histidine kinase-like ATPase domain - - - 0.0000000000000000000000000000000000000000000000000003518 188.0
BYD3_k127_493785_8 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000004619 164.0
BYD3_k127_493785_9 DRTGG domain - - - 0.00000000000000000000000000000001971 129.0
BYD3_k127_5024431_0 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003896 597.0
BYD3_k127_5024431_1 SusD family K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 437.0
BYD3_k127_5024431_2 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000002616 239.0
BYD3_k127_5024431_3 Domain of unknown function (DUF4974) - - - 0.000000000000000000000000000000000000000001414 170.0
BYD3_k127_5024431_4 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000001705 126.0
BYD3_k127_5024431_5 TonB-dependent receptor plug - - - 0.00000000000000000000000000008339 124.0
BYD3_k127_5103492_0 von Willebrand factor, type A K07114 - - 4.027e-216 688.0
BYD3_k127_5103492_1 Pfam:SusD K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007584 458.0
BYD3_k127_5103492_2 Outer membrane protein beta-barrel family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005416 437.0
BYD3_k127_5103492_3 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007737 243.0
BYD3_k127_5103492_4 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002136 243.0
BYD3_k127_5103492_5 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000008347 188.0
BYD3_k127_5103492_6 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000007518 169.0
BYD3_k127_5103492_7 Protein of unknown function (Porph_ging) - - - 0.0000000000000000000000000000007437 132.0
BYD3_k127_5103492_8 PFAM TonB-dependent Receptor Plug K02014 - - 0.0000004651 62.0
BYD3_k127_513025_0 PFAM WD40-like beta Propeller - - - 7.026e-232 756.0
BYD3_k127_513025_1 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 539.0
BYD3_k127_513025_2 Catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005326 523.0
BYD3_k127_513025_3 drug transmembrane transporter activity K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 526.0
BYD3_k127_513025_4 GTP-binding protein TypA K06207 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 443.0
BYD3_k127_513025_5 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000006816 78.0
BYD3_k127_513025_6 Lipocalin-like domain K03098 - - 0.0000001228 61.0
BYD3_k127_5142582_0 - - - - 1.783e-278 909.0
BYD3_k127_5142582_1 conserved protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 543.0
BYD3_k127_5142582_10 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000000000000000000000001088 222.0
BYD3_k127_5142582_11 Transposase IS200 like - - - 0.000000000000000000000000000000000001625 145.0
BYD3_k127_5142582_12 Vitamin B12 dependent methionine synthase, activation domain protein - - - 0.0000000000000000000000000000000012 138.0
BYD3_k127_5142582_2 Aminotransferase class-V K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 488.0
BYD3_k127_5142582_3 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 426.0
BYD3_k127_5142582_4 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005771 393.0
BYD3_k127_5142582_5 Transcriptional regulator, LacI family K02529,K05499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007344 373.0
BYD3_k127_5142582_6 methionine synthase K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 359.0
BYD3_k127_5142582_7 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 320.0
BYD3_k127_5142582_8 2-phosphosulpholactate phosphatase K05979 - 3.1.3.71 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007084 289.0
BYD3_k127_5142582_9 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000182 269.0
BYD3_k127_5155232_0 Carbamoyltransferase C-terminus K00612 - - 2e-251 790.0
BYD3_k127_5155232_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002721 292.0
BYD3_k127_5155232_2 - - - - 0.00000000000001024 74.0
BYD3_k127_5155232_3 Belongs to the glycosyl hydrolase 2 family - - - 0.000000000003966 71.0
BYD3_k127_5155232_4 - - - - 0.00000000003577 64.0
BYD3_k127_5162439_0 cytochrome c-type biogenesis protein CcsB - - - 1.165e-225 728.0
BYD3_k127_5180922_0 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007127 275.0
BYD3_k127_5180922_1 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.00000000000000000000000000000000000000000000002189 174.0
BYD3_k127_5180922_2 NADPH-dependent FMN reductase - - - 0.00000000000000000000000659 102.0
BYD3_k127_5210310_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 545.0
BYD3_k127_5210310_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 440.0
BYD3_k127_5210310_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 306.0
BYD3_k127_5210310_3 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000001921 161.0
BYD3_k127_5210310_4 Cytochrome c - - - 0.000000000000000000000000000000000002166 150.0
BYD3_k127_5210310_5 Domain of unknown function (DUF1987) - - - 0.00000000000000000000000000000000837 132.0
BYD3_k127_5210310_6 Cytochrome c - - - 0.00000000000000000000002532 107.0
BYD3_k127_5210310_7 - - - - 0.0000000000000000000003504 106.0
BYD3_k127_5210310_9 WD domain, G-beta repeat - - - 0.0001854 53.0
BYD3_k127_5242130_0 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009267 336.0
BYD3_k127_5242130_1 DegT/DnrJ/EryC1/StrS aminotransferase family K13010 - 2.6.1.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008396 325.0
BYD3_k127_5250375_0 COG COG3119 Arylsulfatase A and related enzymes - - - 2.728e-245 766.0
BYD3_k127_5250375_1 Oxidoreductase family, C-terminal alpha beta domain - - - 3.024e-205 647.0
BYD3_k127_5250375_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004361 339.0
BYD3_k127_5250375_3 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.000000000000000000000000001047 115.0
BYD3_k127_5250375_4 TonB-dependent receptor - - - 0.00000000000000000000008196 108.0
BYD3_k127_5250375_5 copG family - - - 0.0000000000000001001 82.0
BYD3_k127_525428_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1521.0
BYD3_k127_525428_1 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 581.0
BYD3_k127_525428_10 Histidine kinase - - - 0.0000000000000000000000000000000000000000000001384 178.0
BYD3_k127_525428_11 transcriptional regulator - - - 0.00000000000000000000000000006781 120.0
BYD3_k127_525428_2 COG0798 Arsenite efflux pump ACR3 and related K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004888 525.0
BYD3_k127_525428_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 471.0
BYD3_k127_525428_4 Outer membrane efflux protein K18139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 447.0
BYD3_k127_525428_5 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008062 396.0
BYD3_k127_525428_6 Methylase involved in ubiquinone menaquinone biosynthesis K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 379.0
BYD3_k127_525428_7 wide pore channel activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 331.0
BYD3_k127_525428_8 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000000001519 217.0
BYD3_k127_525428_9 pyrroline-5-carboxylate reductase activity K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000002399 217.0
BYD3_k127_5296612_0 Peptidase family M1 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 401.0
BYD3_k127_5296612_1 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001127 267.0
BYD3_k127_5296612_2 GyrI-like small molecule binding domain - - - 0.0000000000000000000000000000000000001502 145.0
BYD3_k127_5296612_3 Glycosyl hydrolases family 28 - - - 0.0000000000000000000000000000008747 127.0
BYD3_k127_5296612_4 Belongs to the glycosyl hydrolase 28 family - - - 0.000005238 51.0
BYD3_k127_5354087_0 RecG wedge domain K03655 - 3.6.4.12 3.634e-280 877.0
BYD3_k127_5354087_1 PFAM Peptidase family M49 - - - 9.693e-209 662.0
BYD3_k127_5354087_10 electron transport complex, RnfABCDGE type, B subunit K03616 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003164 241.0
BYD3_k127_5354087_11 FMN binding K03612 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000001634 179.0
BYD3_k127_5354087_12 Methyltransferase domain - - - 0.0000000000000000000000000000000155 137.0
BYD3_k127_5354087_13 Acid phosphatase homologues - - - 0.0000000000000000000000000000001198 132.0
BYD3_k127_5354087_14 Glycosyl transferase family 2 - - - 0.00000000000004256 73.0
BYD3_k127_5354087_2 Part of a membrane complex involved in electron transport K03615 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 592.0
BYD3_k127_5354087_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006014 476.0
BYD3_k127_5354087_4 NQR2, RnfD, RnfE family K03614 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 430.0
BYD3_k127_5354087_5 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006896 423.0
BYD3_k127_5354087_6 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 345.0
BYD3_k127_5354087_7 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007847 313.0
BYD3_k127_5354087_8 Part of a membrane complex involved in electron transport K03617 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001161 258.0
BYD3_k127_5354087_9 Part of a membrane complex involved in electron transport K03613 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009067 253.0
BYD3_k127_5362730_0 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.0 1045.0
BYD3_k127_5362730_1 Threonine synthase N terminus K01733 GO:0003674,GO:0003824,GO:0004795,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009088,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 581.0
BYD3_k127_5362730_2 phosphoserine phosphatase homoserine phosphotransferase bifunctional protein K02203 - 2.7.1.39,3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000002753 252.0
BYD3_k127_5362730_3 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000000000000000000000000003227 216.0
BYD3_k127_5362730_4 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K19270 - 3.1.3.23 0.00000000000000000000000000000000005429 139.0
BYD3_k127_5369897_0 CoA carboxylase activity K01966,K01969 - 2.1.3.15,6.4.1.3,6.4.1.4 6.069e-223 704.0
BYD3_k127_5369897_1 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 536.0
BYD3_k127_5369897_2 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961,K01965,K01968 - 6.3.4.14,6.4.1.2,6.4.1.3,6.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 481.0
BYD3_k127_5369897_3 Belongs to the HMG-CoA reductase family K00054 - 1.1.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007644 418.0
BYD3_k127_5369897_4 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid K01823 - 5.3.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004418 386.0
BYD3_k127_5369897_5 diphosphomevalonate decarboxylase K01597 - 4.1.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000817 327.0
BYD3_k127_5369897_6 Enoyl-CoA hydratase/isomerase K13766 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000000000000002147 226.0
BYD3_k127_5369897_7 GHMP Kinase - - - 0.00000000000000000000000000000000000000000000000000000000000002344 226.0
BYD3_k127_5371193_0 Domain of unknown function (DUF4954) - - - 7.778e-255 805.0
BYD3_k127_5371193_1 TrkA C-terminal domain protein K07085 - - 3.571e-200 637.0
BYD3_k127_5371193_2 beta-1,4-mannooligosaccharide phosphorylase K21065 - 3.2.1.197 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 452.0
BYD3_k127_5371193_3 Domain of unknown function (DU1801) - - - 0.0000000000000000000000001047 107.0
BYD3_k127_539985_0 Transport of potassium into the cell K03549 - - 2.719e-222 706.0
BYD3_k127_539985_1 ABC-2 type transporter - - - 5.698e-208 668.0
BYD3_k127_539985_10 Multicopper oxidase - - - 0.000004738 60.0
BYD3_k127_539985_2 membrane protein involved in D-alanine export - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007389 545.0
BYD3_k127_539985_3 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000000000000000000000000000001407 251.0
BYD3_k127_539985_4 Dystroglycan-type cadherin domain protein K11005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001509 267.0
BYD3_k127_539985_5 - - - - 0.00000000000000000000000000000000000000000000000001289 190.0
BYD3_k127_539985_6 Peptidase S8 K08651 - 3.4.21.66 0.0000000000000000000000000000000000000000000000309 193.0
BYD3_k127_539985_7 Protein of unknown function (DUF418) K07148 - - 0.000000000000000000009495 96.0
BYD3_k127_539985_8 SGNH hydrolase-like domain, acetyltransferase AlgX - - - 0.0000001036 64.0
BYD3_k127_539985_9 GDSL-like Lipase/Acylhydrolase family - - - 0.0000001298 65.0
BYD3_k127_5405527_0 Psort location Cytoplasmic, score 8.96 K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 357.0
BYD3_k127_5405527_1 COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000621 291.0
BYD3_k127_5405527_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006192 277.0
BYD3_k127_5405527_3 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K13566 - 3.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000003735 263.0
BYD3_k127_5405527_4 Peptidyl-prolyl cis-trans isomerase K01802,K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000000000002479 187.0
BYD3_k127_5405527_5 Belongs to the SOS response-associated peptidase family - - - 0.00000000000000000000000000000000000000000000000006245 184.0
BYD3_k127_5405527_6 S-adenosyl-l-methionine hydroxide adenosyltransferase - - - 0.0000000000000000000000000000000000000000000000001885 183.0
BYD3_k127_5405527_7 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000341 113.0
BYD3_k127_5447488_0 Oxidoreductase - - - 2.133e-275 852.0
BYD3_k127_5447488_1 Oxidoreductase domain protein - - - 5.215e-202 638.0
BYD3_k127_5447488_2 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 485.0
BYD3_k127_5447488_3 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 319.0
BYD3_k127_5447488_4 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002671 268.0
BYD3_k127_5447488_5 SMART Integrin alpha beta-propellor repeat protein - - - 0.00000000000000000000000000000000000000000000000000000005822 220.0
BYD3_k127_5447488_6 domain, Protein K08961 - 4.2.2.20,4.2.2.21 0.000000000000007928 89.0
BYD3_k127_5447488_7 long-chain fatty acid transporting porin activity - - - 0.000000000000008892 77.0
BYD3_k127_5483138_0 chitinase - - - 9.554e-200 654.0
BYD3_k127_5519335_0 Efflux ABC transporter, permease protein K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 483.0
BYD3_k127_5519335_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005194 459.0
BYD3_k127_5519335_2 Efflux ABC transporter, permease protein K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008598 411.0
BYD3_k127_5519335_3 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 355.0
BYD3_k127_5519335_4 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001053 240.0
BYD3_k127_5519335_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000003453 64.0
BYD3_k127_5519335_6 Domain of unknown function (DUF4270) - - - 0.0000003738 56.0
BYD3_k127_5607872_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004218 404.0
BYD3_k127_5607872_1 Carbohydrate kinase, FGGY family protein K00848,K00879 GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009056,GO:0016052,GO:0019299,GO:0019301,GO:0019318,GO:0019320,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575 2.7.1.5,2.7.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 391.0
BYD3_k127_5607872_2 Glycosyl hydrolase family 65, N-terminal domain K15923 - 3.2.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 370.0
BYD3_k127_5607872_3 transcriptional regulator K07665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 291.0
BYD3_k127_5607872_4 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000281 242.0
BYD3_k127_5624660_0 Belongs to the MurCDEF family K03802 - 6.3.2.29,6.3.2.30 3.209e-296 934.0
BYD3_k127_5624660_1 N-terminal domain of (some) glycogen debranching enzymes - - - 1.028e-233 743.0
BYD3_k127_5624660_2 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005075 447.0
BYD3_k127_5624660_3 Belongs to the peptidase S51 family K13282 - 3.4.15.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000564 338.0
BYD3_k127_5624660_4 Response regulator receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001233 249.0
BYD3_k127_5624660_5 cheY-homologous receiver domain K02485 - - 0.000000000000000000000000000000000000001978 148.0
BYD3_k127_5624660_6 diguanylate cyclase - - - 0.000000000000000000000000005822 127.0
BYD3_k127_5624660_7 - - - - 0.00000000000000000615 87.0
BYD3_k127_5643166_0 Domain of unknown function (DUF5107) - - - 3.99e-197 642.0
BYD3_k127_5643166_1 Domain of unknown function (DUF5107) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 441.0
BYD3_k127_5643166_2 Glycosyl Hydrolase Family 88 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 357.0
BYD3_k127_5673703_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 2.265e-199 653.0
BYD3_k127_568081_0 Beta-L-arabinofuranosidase, GH127 K09955 - - 1.632e-240 752.0
BYD3_k127_568081_1 DnaJ molecular chaperone homology domain - - - 0.0000000000000007709 90.0
BYD3_k127_5824427_0 oxidase, subunit K00425 - 1.10.3.14 1.379e-217 686.0
BYD3_k127_5824427_1 flavodoxin nitric oxide synthase K22405 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0010181,GO:0016491,GO:0016651,GO:0016661,GO:0016662,GO:0016966,GO:0022900,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0048037,GO:0050662,GO:0050664,GO:0055114,GO:0072593,GO:0097159,GO:0097367,GO:1901265,GO:1901363 1.6.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007551 490.0
BYD3_k127_5824427_10 Domain of unknown function (DUF4492) - - - 0.000000000000000007216 86.0
BYD3_k127_5824427_2 Cytochrome bd terminal oxidase subunit II K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 470.0
BYD3_k127_5824427_3 PFAM CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003763 413.0
BYD3_k127_5824427_4 ParB-like nuclease domain K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 333.0
BYD3_k127_5824427_5 Glutamine cyclotransferase K00683 - 2.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001643 289.0
BYD3_k127_5824427_6 cell adhesion involved in biofilm formation - - - 0.0000000000000000000000000000000000000000000000000000000000000003812 251.0
BYD3_k127_5824427_7 D,D-heptose 1,7-bisphosphate phosphatase - - - 0.00000000000000000000000000000000000000000000000000006031 189.0
BYD3_k127_5824427_8 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000001234 178.0
BYD3_k127_5824427_9 - - - - 0.00000000000000000000000000000000007442 141.0
BYD3_k127_5909162_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 0.0 1087.0
BYD3_k127_5909162_1 Phosphoglucomutase K01835 - 5.4.2.2 8.809e-225 710.0
BYD3_k127_5909162_2 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 507.0
BYD3_k127_5909162_3 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001985 257.0
BYD3_k127_5909162_4 RmlD substrate binding domain K00067 - 1.1.1.133 0.0000000000000000001538 89.0
BYD3_k127_5909976_0 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 658.0
BYD3_k127_5909976_1 Type IX secretion system membrane protein PorP/SprF - - - 0.000000000000000000000000000000000000000000000000000000000000000000009941 244.0
BYD3_k127_5909976_2 membrane K06142 - - 0.000000000000000000003121 101.0
BYD3_k127_5951190_0 Belongs to the glycosyl hydrolase 30 family K01201 - 3.2.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008797 479.0
BYD3_k127_5951190_1 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005246 467.0
BYD3_k127_5951190_2 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 332.0
BYD3_k127_5951190_3 Pyruvate formate lyase-like K00656,K20038 - 2.3.1.54,4.3.99.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002692 324.0
BYD3_k127_5951190_4 NAD(P)H-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000302 258.0
BYD3_k127_5951190_5 - - - - 0.00000000000000000000000000000000000000003718 162.0
BYD3_k127_5990884_0 Putative esterase K07214 - - 0.0 1027.0
BYD3_k127_5990884_1 Hsp90 protein K04079 - - 4.571e-309 960.0
BYD3_k127_5990884_10 bacterial (prokaryotic) histone like domain K03530 - - 0.00000000000000000000000000000000000001089 145.0
BYD3_k127_5990884_11 nuclear chromosome segregation - - - 0.00000000000000000000000001369 120.0
BYD3_k127_5990884_12 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000002184 117.0
BYD3_k127_5990884_2 ABC transporter, ATP-binding protein - - - 1.789e-275 854.0
BYD3_k127_5990884_3 Belongs to the glycosyl hydrolase 43 family - - - 1.73e-267 831.0
BYD3_k127_5990884_4 TonB-linked outer membrane protein, SusC RagA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007977 434.0
BYD3_k127_5990884_5 Belongs to the glycosyl hydrolase 43 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002692 351.0
BYD3_k127_5990884_6 Response regulator of the LytR AlgR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 319.0
BYD3_k127_5990884_7 Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA K00556 - 2.1.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000006782 258.0
BYD3_k127_5990884_8 FecR protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006722 249.0
BYD3_k127_5990884_9 - - - - 0.00000000000000000000000000000000000000000000000002984 188.0
BYD3_k127_5994258_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.237e-211 666.0
BYD3_k127_5994258_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 587.0
BYD3_k127_5994258_2 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004545 554.0
BYD3_k127_5994258_3 NAD binding K00018,K00058 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.1.1.29,1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 374.0
BYD3_k127_5994258_4 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.000000000000000000000000000000000003375 139.0
BYD3_k127_6028369_0 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 443.0
BYD3_k127_6028369_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004259 419.0
BYD3_k127_6028369_2 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002025 277.0
BYD3_k127_6028369_3 TIGRFAM RNA polymerase sigma factor, sigma-70 family - - - 0.000000000000000000000000000000000000000004646 158.0
BYD3_k127_6028369_4 PFAM CheW-like K03408 - - 0.000000000000000000000000000006198 126.0
BYD3_k127_6028369_5 phosphorelay signal transduction system - - - 0.00000000000000000000000000006367 119.0
BYD3_k127_6028369_6 - - - - 0.000000000001725 71.0
BYD3_k127_6072537_0 ABC transporter, permease protein K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007522 396.0
BYD3_k127_6072537_1 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 308.0
BYD3_k127_6077790_0 K+ potassium transporter K03549 - - 2.28e-237 752.0
BYD3_k127_6077790_1 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 552.0
BYD3_k127_6077790_2 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003977 471.0
BYD3_k127_6077790_3 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 0.000001063 55.0
BYD3_k127_6077790_4 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 0.000007525 49.0
BYD3_k127_6095160_0 Cellulase (glycosyl hydrolase family 5) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 532.0
BYD3_k127_6095160_1 Phospholipase, patatin family K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005846 486.0
BYD3_k127_6095160_10 Repeat protein - - - 0.0000000000001874 76.0
BYD3_k127_6095160_11 Glucose / Sorbosone dehydrogenase - - - 0.0000000000006173 79.0
BYD3_k127_6095160_2 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007586 463.0
BYD3_k127_6095160_3 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008139 435.0
BYD3_k127_6095160_4 transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003781 400.0
BYD3_k127_6095160_5 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 310.0
BYD3_k127_6095160_6 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 310.0
BYD3_k127_6095160_7 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000000001419 190.0
BYD3_k127_6095160_8 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000004101 167.0
BYD3_k127_6095160_9 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.00000000000000000000000000001367 123.0
BYD3_k127_6141327_0 glucosamine-6-phosphate deaminase K02564 - 3.5.99.6 1.589e-280 882.0
BYD3_k127_6141327_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.282e-270 848.0
BYD3_k127_6141327_10 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000001563 218.0
BYD3_k127_6141327_11 MarC family integral membrane protein K05595 - - 0.0000000000000000000000000000000000000000000000000000000001455 209.0
BYD3_k127_6141327_12 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000006802 210.0
BYD3_k127_6141327_13 Biotin/lipoate A/B protein ligase family K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000006677 184.0
BYD3_k127_6141327_14 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000000002111 130.0
BYD3_k127_6141327_15 Lipopolysaccharide-assembly, LptC-related - - - 0.0000000000000000000000001 114.0
BYD3_k127_6141327_16 - - - - 0.00000008272 60.0
BYD3_k127_6141327_2 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009056,GO:0009279,GO:0009987,GO:0016020,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0033218,GO:0034641,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044462,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 9.27e-250 790.0
BYD3_k127_6141327_3 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 9.07e-209 654.0
BYD3_k127_6141327_4 SurA N-terminal domain K01802,K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 521.0
BYD3_k127_6141327_5 Hemolysin K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 405.0
BYD3_k127_6141327_6 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008272 389.0
BYD3_k127_6141327_7 Male sterility protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003988 380.0
BYD3_k127_6141327_8 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008608 267.0
BYD3_k127_6141327_9 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000006539 224.0
BYD3_k127_6150895_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1406.0
BYD3_k127_6150895_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 1.917e-218 688.0
BYD3_k127_6150895_10 Peptidase family S51 K13282 - 3.4.15.6 0.000000000000000000000000000000000000000000000000000000000000002837 227.0
BYD3_k127_6150895_11 - - - - 0.00000000000000000000000000000000000000000000000000000000001431 219.0
BYD3_k127_6150895_12 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000000000001825 206.0
BYD3_k127_6150895_13 Protein of unknown function, DUF485 - - - 0.0000000000000000000001007 101.0
BYD3_k127_6150895_14 - - - - 0.00000000000000001039 87.0
BYD3_k127_6150895_16 - - - - 0.00001309 53.0
BYD3_k127_6150895_2 Thiamine pyrophosphate enzyme, central domain K00158 - 1.2.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 504.0
BYD3_k127_6150895_3 fad dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007755 441.0
BYD3_k127_6150895_4 L-asparaginase, type I K01424 - 3.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004855 417.0
BYD3_k127_6150895_5 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007351 399.0
BYD3_k127_6150895_6 DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 397.0
BYD3_k127_6150895_7 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000077 302.0
BYD3_k127_6150895_8 Predicted membrane protein (DUF2231) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008679 304.0
BYD3_k127_6150895_9 TIGRFAM hydrolase, TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001693 276.0
BYD3_k127_6162213_0 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 465.0
BYD3_k127_6162213_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 342.0
BYD3_k127_6162213_2 LytTr DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001183 258.0
BYD3_k127_6162213_3 Aldo/keto reductase family K07079 - - 0.0000000000000000000000000000000000000000000000000000000000000000005379 245.0
BYD3_k127_6162213_4 TIGRFAM TIGR00268 family protein K06864 - - 0.00000000000000000000000000000000000000000001979 166.0
BYD3_k127_6171279_0 Cellulase (glycosyl hydrolase family 5) K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 373.0
BYD3_k127_6171279_1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon K01250 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 325.0
BYD3_k127_6171279_2 Psort location Cytoplasmic, score 9.26 - - - 0.0000000000000000000000000000000000000000015 160.0
BYD3_k127_6171279_3 - - - - 0.000000000000000000000000000000003332 138.0
BYD3_k127_6171279_4 phospholipase Carboxylesterase - - - 0.0000000000000000005576 100.0
BYD3_k127_618229_0 COG2706 3-carboxymuconate cyclase K07404 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001658 280.0
BYD3_k127_618229_1 RNA polymerase sigma-70 factor K03088 - - 0.0000000000000000000000000000000004636 138.0
BYD3_k127_618229_2 FecR protein - - - 0.000000000000000000000000000001201 133.0
BYD3_k127_618229_3 CarboxypepD_reg-like domain - - - 0.00000001715 64.0
BYD3_k127_6186790_0 LytTr DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006232 249.0
BYD3_k127_6186790_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001149 230.0
BYD3_k127_6186790_2 PFAM histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000003234 219.0
BYD3_k127_6186790_3 Putative zincin peptidase - - - 0.000000000000000000000001817 109.0
BYD3_k127_6186790_4 Protein of unknown function (DUF3795) - - - 0.00000000000000000000003215 100.0
BYD3_k127_6186790_5 Heat shock 70 kDa protein K18481 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000858 54.0
BYD3_k127_6247869_0 RQC K03654 - 3.6.4.12 0.0 1053.0
BYD3_k127_6247869_1 Seryl-tRNA synthetase N-terminal domain K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 596.0
BYD3_k127_6247869_10 HIT domain K02503 - - 0.00000000000000000000000000000000000000000000000000000000004956 208.0
BYD3_k127_6247869_11 probably involved in cell wall biogenesis - - - 0.000000000000000000000000000000000000000000000000004969 195.0
BYD3_k127_6247869_12 Transcription elongation factor, N-terminal K03624 - - 0.00000000000000000000000000000000000000002083 154.0
BYD3_k127_6247869_13 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000004763 146.0
BYD3_k127_6247869_14 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000000000000002788 143.0
BYD3_k127_6247869_2 ABC transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 389.0
BYD3_k127_6247869_3 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 357.0
BYD3_k127_6247869_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 303.0
BYD3_k127_6247869_5 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004735 277.0
BYD3_k127_6247869_6 4Fe-4S ferredoxin iron-sulfur binding domain protein K07138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003652 267.0
BYD3_k127_6247869_7 Peptidase family S41 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002201 265.0
BYD3_k127_6247869_8 Bifunctional nuclease K08999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001307 252.0
BYD3_k127_6247869_9 Crossover junction endodeoxyribonuclease RuvC K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000562 212.0
BYD3_k127_6262348_0 Belongs to the peptidase M16 family K07263 - - 1.029e-268 856.0
BYD3_k127_6262348_1 N-acetylglucosaminylinositol deacetylase activity K01463 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001909 267.0
BYD3_k127_6262348_2 Iron/manganese superoxide dismutases, alpha-hairpin domain K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000001397 220.0
BYD3_k127_6262348_3 - - - - 0.0000003057 58.0
BYD3_k127_6262848_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 522.0
BYD3_k127_6262848_1 Domain of unknown function (DUF4162) K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004247 378.0
BYD3_k127_6262848_2 Glycosyl hydrolase family 3 C-terminal domain K05349 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 304.0
BYD3_k127_6262848_3 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004948 252.0
BYD3_k127_6262848_4 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000005079 197.0
BYD3_k127_6262848_5 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000002527 181.0
BYD3_k127_6297286_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 304.0
BYD3_k127_6297286_1 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000992 246.0
BYD3_k127_6297286_2 tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000001342 201.0
BYD3_k127_6297286_3 Oxygen tolerance - - - 0.00000000000000000000000000000000000000000000004248 177.0
BYD3_k127_6297286_4 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000000000000001255 130.0
BYD3_k127_6297286_5 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.00000000000000000000001273 103.0
BYD3_k127_6297286_6 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000001563 99.0
BYD3_k127_6311642_0 Protein of unknown function (DUF2723) - - - 6.514e-308 965.0
BYD3_k127_6311642_1 penicillin-binding protein K05367 - 2.4.1.129 1.753e-262 830.0
BYD3_k127_6311642_2 Queuosine biosynthesis protein K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003949 574.0
BYD3_k127_6311642_3 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000004155 259.0
BYD3_k127_6311642_4 Methylpurine-DNA glycosylase (MPG) K03652 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000002393 207.0
BYD3_k127_6311642_5 PFAM translation initiation factor SUI1 K03113 - - 0.00000000000000000000000000000000002814 137.0
BYD3_k127_634059_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007174 471.0
BYD3_k127_634059_1 PCRF K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 471.0
BYD3_k127_634059_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004155 384.0
BYD3_k127_634059_3 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009604 274.0
BYD3_k127_634059_4 RecX family K03565 - - 0.000000000000000000000000000638 118.0
BYD3_k127_634059_5 peptidyl-tyrosine sulfation - - - 0.0002926 46.0
BYD3_k127_6359253_0 Quinol cytochrome c oxidoreductase K00184 - - 4.492e-315 993.0
BYD3_k127_6359253_1 PFAM Prolyl oligopeptidase family - - - 2.254e-241 762.0
BYD3_k127_6359253_10 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009402 258.0
BYD3_k127_6359253_11 Quinol cytochrome c oxidoreductase membrane protein - - - 0.000000000000000000000000000000000000000001588 162.0
BYD3_k127_6359253_12 Cytochrome C - - - 0.000000000000000000000000000000000000000006391 160.0
BYD3_k127_6359253_13 - - - - 0.00000000000000000000000000009116 117.0
BYD3_k127_6359253_14 Histidine kinase - - - 0.0000000000000000000000000007802 128.0
BYD3_k127_6359253_15 Histidine kinase - - - 0.00000000000000000798 96.0
BYD3_k127_6359253_16 dihydrofolate reductase activity - - - 0.00000000000003212 79.0
BYD3_k127_6359253_17 AraC family - - - 0.0000000007749 64.0
BYD3_k127_6359253_18 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.00000000132 63.0
BYD3_k127_6359253_19 Histidine kinase K03406,K21470 - - 0.0000009542 61.0
BYD3_k127_6359253_2 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 4.268e-225 704.0
BYD3_k127_6359253_3 PFAM Polysulphide reductase, NrfD K00185 - - 2.817e-219 687.0
BYD3_k127_6359253_4 Quinol cytochrome c oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005211 359.0
BYD3_k127_6359253_5 Belongs to the MlaE permease family K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 339.0
BYD3_k127_6359253_6 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 316.0
BYD3_k127_6359253_7 Quinol cytochrome c oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006031 314.0
BYD3_k127_6359253_8 signal sequence binding K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006941 291.0
BYD3_k127_6359253_9 Cytochrome c oxidase subunit III K02164 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003572 257.0
BYD3_k127_6401888_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 8.909e-295 960.0
BYD3_k127_6401888_1 catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation K00266,K17722 - 1.3.1.1,1.4.1.13,1.4.1.14 2.018e-205 649.0
BYD3_k127_6401888_2 arsenite transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 587.0
BYD3_k127_6401888_3 Belongs to the glycosyl hydrolase 26 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 503.0
BYD3_k127_6401888_4 Ferredoxin-NADP reductase K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 392.0
BYD3_k127_6401888_5 Pas domain K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000001199 182.0
BYD3_k127_6401888_6 Membrane protein involved in D-alanine export - - - 0.000000000000000000000000000001256 124.0
BYD3_k127_6401888_7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000002296 128.0
BYD3_k127_641698_0 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003102 546.0
BYD3_k127_641698_1 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 347.0
BYD3_k127_647080_0 ABC transporter, ATP-binding protein K15738 - - 1.974e-210 670.0
BYD3_k127_647080_1 FG-GAP repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 400.0
BYD3_k127_647080_2 Flavin-binding monooxygenase-like K07222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007189 376.0
BYD3_k127_647080_3 OsmC-like protein - - - 0.000000000000000000000000000000000000000000000000000000000003798 211.0
BYD3_k127_647080_4 Protein conserved in bacteria - - - 0.000000000000000000000000000000002281 145.0
BYD3_k127_647080_5 acetyltransferase - - - 0.00000000004758 72.0
BYD3_k127_6511225_0 Surface antigen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009314 489.0
BYD3_k127_6511225_1 LVIVD repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007128 392.0
BYD3_k127_6511225_2 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000001122 264.0
BYD3_k127_6511225_3 TamB, inner membrane protein subunit of TAM complex - - - 0.000000000000000000000000000000000000000000000000000000001247 225.0
BYD3_k127_6511225_4 long-chain fatty acid transporting porin activity - - - 0.0000000000004659 78.0
BYD3_k127_654065_0 Region found in RelA / SpoT proteins K00951 - 2.7.6.5 4.367e-283 887.0
BYD3_k127_654065_1 C-terminal domain of CHU protein family - - - 0.00000000000000000000000001631 124.0
BYD3_k127_654065_2 Belongs to the Fur family K03711 - - 0.00000000000003135 73.0
BYD3_k127_65463_0 TonB-dependent receptor plug domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004771 619.0
BYD3_k127_65463_1 PFAM Y_Y_Y domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 452.0
BYD3_k127_65463_2 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006353 329.0
BYD3_k127_65463_3 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002404 281.0
BYD3_k127_65463_4 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000001195 216.0
BYD3_k127_65463_5 DEAD DEAH box helicase K03724 - - 0.00000000000000000000000000000000000000000000000000000000000002205 219.0
BYD3_k127_65463_7 Domain of unknown function (DUF4249) - - - 0.00000000003495 74.0
BYD3_k127_65463_8 TAP-like protein - - - 0.00000005481 64.0
BYD3_k127_6589065_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009009 529.0
BYD3_k127_6589065_1 Histidine biosynthesis bifunctional protein HisB K01089,K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005821 514.0
BYD3_k127_6589065_10 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009949 313.0
BYD3_k127_6589065_11 Multidrug ABC transporter ATPase K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 295.0
BYD3_k127_6589065_12 FMN binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001179 269.0
BYD3_k127_6589065_13 Beta-ketoacyl synthase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001301 258.0
BYD3_k127_6589065_14 LytTr DNA-binding domain K02477 - - 0.00000000000000000000000000000000000000000000000000002789 196.0
BYD3_k127_6589065_15 - - - - 0.000000000000000000000000000000001404 134.0
BYD3_k127_6589065_16 acyl carrier protein K02078 - - 0.00000000000000000000008499 100.0
BYD3_k127_6589065_17 - - - - 0.00000000000000000006521 98.0
BYD3_k127_6589065_2 Flavin containing amine oxidoreductase K09516 - 1.3.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 447.0
BYD3_k127_6589065_3 this condensing enzyme differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 441.0
BYD3_k127_6589065_4 Allinase K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 436.0
BYD3_k127_6589065_5 peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004416 400.0
BYD3_k127_6589065_6 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 378.0
BYD3_k127_6589065_7 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009154 382.0
BYD3_k127_6589065_8 Transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000743 337.0
BYD3_k127_6589065_9 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 338.0
BYD3_k127_659056_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 565.0
BYD3_k127_659056_1 PCRF K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 536.0
BYD3_k127_659056_10 Protein of unknown function (DUF2851) - - - 0.000000000000000000000000000000000000167 147.0
BYD3_k127_659056_11 - - - - 0.0000005352 53.0
BYD3_k127_659056_2 Belongs to the peptidase M16 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 469.0
BYD3_k127_659056_3 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 359.0
BYD3_k127_659056_4 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity K00819,K00821,K05830,K09251,K21778 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006576,GO:0006595,GO:0006598,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009056,GO:0009058,GO:0009308,GO:0009310,GO:0009445,GO:0009447,GO:0009987,GO:0016740,GO:0016769,GO:0016999,GO:0017000,GO:0017144,GO:0019842,GO:0030170,GO:0033094,GO:0034641,GO:0036094,GO:0042402,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0044106,GO:0044237,GO:0044249,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0070280,GO:0071704,GO:0097159,GO:0097164,GO:1901363,GO:1901564,GO:1901565,GO:1901575 2.6.1.11,2.6.1.13,2.6.1.17,2.6.1.82 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 312.0
BYD3_k127_659056_5 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 312.0
BYD3_k127_659056_6 PFAM MerR family regulatory protein K22491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 291.0
BYD3_k127_659056_7 O-Methyltransferase K00588 - 2.1.1.104 0.00000000000000000000000000000000000000000000000000000000000000000001402 240.0
BYD3_k127_659056_8 ECF sigma factor K03088 - - 0.000000000000000000000000000000000000000000000000000001876 195.0
BYD3_k127_659056_9 Alpha beta - - - 0.000000000000000000000000000000000000000000004875 176.0
BYD3_k127_6594913_0 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 593.0
BYD3_k127_6594913_1 serine-type endopeptidase activity K04771 - 3.4.21.107 0.00000000002296 74.0
BYD3_k127_6651305_0 Oligoendopeptidase f K01283 - 3.4.15.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 391.0
BYD3_k127_6651305_1 Putative neutral zinc metallopeptidase K06973 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 317.0
BYD3_k127_6651305_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000002674 164.0
BYD3_k127_6651305_3 domain, Protein - - - 0.000000000000000000000003251 117.0
BYD3_k127_6651305_4 peptidase activity, acting on L-amino acid peptides - - - 0.000000000000000000009526 103.0
BYD3_k127_6651305_5 COG3794 Plastocyanin K12132 - 2.7.11.1 0.0000000004504 70.0
BYD3_k127_6651305_6 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000009175 56.0
BYD3_k127_6654213_0 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 3.739e-306 951.0
BYD3_k127_6654213_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K08323 - 4.2.1.8 4.415e-204 640.0
BYD3_k127_6654213_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006295 454.0
BYD3_k127_6654213_3 Periplasmic binding protein LacI transcriptional regulator K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003212 388.0
BYD3_k127_6654213_4 metallocarboxypeptidase activity K06987,K07752 - 3.4.17.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003301 362.0
BYD3_k127_6654213_5 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) K00046 - 1.1.1.69 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 320.0
BYD3_k127_6654213_6 MFS/sugar transport protein K03292 - - 0.0000000000000000000000000000000000000000000004729 169.0
BYD3_k127_6654213_7 GHKL domain - - - 0.00000000000000000000000000000007302 127.0
BYD3_k127_6654213_8 - - - - 0.0000209 51.0
BYD3_k127_6667385_0 TonB-dependent Receptor Plug Domain K02014,K16089 - - 6.117e-319 990.0
BYD3_k127_6667385_1 - - - - 0.00000000000000000000000000000000000000000000000000000000005491 218.0
BYD3_k127_6667385_2 Domain of unknown function (DUF4956) - - - 0.000000000000000000000000000000001634 138.0
BYD3_k127_6667385_3 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000001313 124.0
BYD3_k127_6673265_0 TonB dependent receptor - - - 2.539e-229 745.0
BYD3_k127_6673265_1 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002854 544.0
BYD3_k127_6673265_2 Cysteine-rich domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 541.0
BYD3_k127_6673265_3 FAD binding domain K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006704 331.0
BYD3_k127_6673265_4 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000001968 254.0
BYD3_k127_6673265_5 Starch-binding associating with outer membrane - - - 0.00000000000000000000000000000000002872 142.0
BYD3_k127_6673265_6 Spermine/spermidine synthase domain - - - 0.000000000000000000000000000000002052 149.0
BYD3_k127_6673265_7 4Fe-4S dicluster domain - - - 0.00000000000000005967 87.0
BYD3_k127_673510_0 TonB dependent receptor - - - 2.165e-273 880.0
BYD3_k127_673510_1 Putative oxidoreductase C terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005126 594.0
BYD3_k127_673510_10 Domain of unknown function (DUF5009) - - - 0.0000000003144 63.0
BYD3_k127_673510_2 cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 604.0
BYD3_k127_673510_3 SusD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008988 328.0
BYD3_k127_673510_4 Glycogen debranching enzyme - - - 0.0000000000000000000000000000000000000000000000000000002469 220.0
BYD3_k127_673510_5 Outer surface protein K07106,K09963 - 4.2.1.126 0.00000000000000000000000000000000000000000000000000007164 196.0
BYD3_k127_673510_6 Fe2 -dicitrate sensor, membrane component - - - 0.00000000000000000000000000000000000000000000000001002 193.0
BYD3_k127_673510_7 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000002003 142.0
BYD3_k127_673510_8 Sigma-70, region 4 - - - 0.000000000000000000000000000000000002319 144.0
BYD3_k127_673510_9 DoxX K16937 - 1.8.5.2 0.000000000000000000000000000000000002604 155.0
BYD3_k127_6763792_0 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K02275 - 1.9.3.1 2.53e-249 784.0
BYD3_k127_6763792_1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000765 617.0
BYD3_k127_6763792_2 with different specificities (related to short-chain alcohol - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005736 299.0
BYD3_k127_6763792_3 B3/4 domain - - - 0.0000000000000000000000000000000000000000000000000000000000003622 218.0
BYD3_k127_6763792_4 Fibrobacter succinogenes major domain (Fib_succ_major) - - - 0.0000000000000000000000000000000000000000000000003393 183.0
BYD3_k127_6763792_5 TIGRFAM daunorubicin resistance ABC transporter ATP-binding subunit K01990 - - 0.0000000000000001463 80.0
BYD3_k127_6779221_0 Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose K16212 - 2.4.1.281 1.109e-211 662.0
BYD3_k127_6779221_1 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003775 514.0
BYD3_k127_6779221_2 Catalyzes the reversible epimerization of cellobiose to 4-O-beta-D-glucopyranosyl-D-mannose (Glc-Man) K16213 - 5.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 451.0
BYD3_k127_6779221_3 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007371 278.0
BYD3_k127_6779221_4 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000001171 210.0
BYD3_k127_6779221_5 pfam nipsnap - - - 0.00000000000000000000000000000000000000000000000004052 187.0
BYD3_k127_6779221_6 oxidoreductase activity - - - 0.00000000000000000000000000000000000000000000001745 177.0
BYD3_k127_6779221_7 - - - - 0.0000000000000003735 81.0
BYD3_k127_678667_0 Sigma factor PP2C-like phosphatases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 438.0
BYD3_k127_678667_1 Putative Fe-S cluster - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007084 286.0
BYD3_k127_678667_2 Electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001269 269.0
BYD3_k127_678667_3 Electron transfer flavoprotein K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004444 254.0
BYD3_k127_682922_0 X-Pro dipeptidyl-peptidase (S15 family) - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044464,GO:0046983,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 2.749e-241 764.0
BYD3_k127_682922_1 pfkB family carbohydrate kinase K00874 - 2.7.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 602.0
BYD3_k127_682922_2 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 378.0
BYD3_k127_682922_3 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000006747 235.0
BYD3_k127_682922_4 Histidine kinase - - - 0.000000000000000000003634 97.0
BYD3_k127_6875730_0 Peptidase S46 - - - 1.349e-219 702.0
BYD3_k127_6875730_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004068 392.0
BYD3_k127_6875730_10 Phosphoribosyl-AMP cyclohydrolase K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000003232 145.0
BYD3_k127_6875730_11 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000005038 139.0
BYD3_k127_6875730_12 Protein of unknown function (DUF2795) - - - 0.00000000003495 65.0
BYD3_k127_6875730_2 PFAM Iron-containing alcohol dehydrogenase K00048 - 1.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003245 378.0
BYD3_k127_6875730_3 Glycosyl hydrolase family 26 K01218 - 3.2.1.78 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 354.0
BYD3_k127_6875730_4 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 335.0
BYD3_k127_6875730_5 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008938 285.0
BYD3_k127_6875730_6 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 286.0
BYD3_k127_6875730_7 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000001032 229.0
BYD3_k127_6875730_8 UbiA prenyltransferase family K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000002113 203.0
BYD3_k127_6875730_9 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000249 164.0
BYD3_k127_6894923_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006733 417.0
BYD3_k127_6894923_1 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 306.0
BYD3_k127_6894923_2 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000001648 254.0
BYD3_k127_691914_0 signal peptide peptidase SppA, 67K type K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 476.0
BYD3_k127_691914_1 Creatinine amidohydrolase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006836 331.0
BYD3_k127_691914_2 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 286.0
BYD3_k127_691914_3 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000000005582 229.0
BYD3_k127_691914_4 Ribosomal protein S16 K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000002229 206.0
BYD3_k127_691914_5 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.000000000000000000000000000000000000004011 151.0
BYD3_k127_691914_6 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000000000000000000000000000003785 144.0
BYD3_k127_691914_7 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000002846 117.0
BYD3_k127_691914_8 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000000000002466 104.0
BYD3_k127_691914_9 C-terminal domain of CHU protein family - - - 0.000000000001078 80.0
BYD3_k127_6941175_0 Hsp70 protein K04043 - - 0.0 1016.0
BYD3_k127_6941175_1 Ketopantoate hydroxymethyltransferase K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003251 426.0
BYD3_k127_6941175_2 ribosomal pseudouridine synthase C, large subunit K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004212 313.0
BYD3_k127_6941175_3 TIGRFAM YihY family protein (not ribonuclease BN) K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 292.0
BYD3_k127_6941175_4 Flavodoxin domain - - - 0.0000000000000000000000000000000000000000000000000000004012 203.0
BYD3_k127_6941175_5 MORN repeat variant - - - 0.000000000000000000000000000000000000000000003088 173.0
BYD3_k127_6941175_6 COGs COG2610 H gluconate symporter and related permease K03299 - - 0.0000000000000000000000000000000000000000001108 163.0
BYD3_k127_6941175_7 Subtilase family - - - 0.00000000000000000006546 95.0
BYD3_k127_696134_0 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007829 520.0
BYD3_k127_696134_1 Neutral zinc metallopeptidase K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007817 355.0
BYD3_k127_696134_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000002758 207.0
BYD3_k127_6983169_0 TonB-dependent Receptor Plug Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006812 379.0
BYD3_k127_6983169_1 Domain of unknown function (DUF4974) - - - 0.00000000000000000000000000000000000000000000000000000000003687 215.0
BYD3_k127_6983169_2 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000002171 161.0
BYD3_k127_6983169_3 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000003228 154.0
BYD3_k127_698839_0 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 340.0
BYD3_k127_698839_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 332.0
BYD3_k127_698839_10 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000158 191.0
BYD3_k127_698839_11 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.0000000005378 74.0
BYD3_k127_698839_12 cellulose binding - - - 0.0000004799 63.0
BYD3_k127_698839_13 Histidine kinase K02482 - 2.7.13.3 0.0006626 54.0
BYD3_k127_698839_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000717 310.0
BYD3_k127_698839_3 Domain of unknown function (DUF4918) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003712 276.0
BYD3_k127_698839_4 peptidase activity, acting on L-amino acid peptides - - - 0.0000000000000000000000000000000000000000000000000000000000000000001116 251.0
BYD3_k127_698839_5 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000001671 231.0
BYD3_k127_698839_6 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000000000001975 227.0
BYD3_k127_698839_7 Protein of unknown function (DUF1460) - - - 0.000000000000000000000000000000000000000000000000000000000001656 219.0
BYD3_k127_698839_8 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000000000003529 207.0
BYD3_k127_698839_9 Belongs to the aspartate glutamate racemases family K01779 - 5.1.1.13 0.0000000000000000000000000000000000000000000000000000003409 199.0
BYD3_k127_7033099_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1006.0
BYD3_k127_7033099_1 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 540.0
BYD3_k127_7033099_2 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005619 445.0
BYD3_k127_7033099_3 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 408.0
BYD3_k127_7033099_4 Domain of unknown function (DUF4835) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 301.0
BYD3_k127_7033099_5 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001665 257.0
BYD3_k127_7033099_6 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000008416 251.0
BYD3_k127_7033099_7 Flavoprotein K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000002389 184.0
BYD3_k127_7033099_8 AI-2E family transporter - - - 0.0000000003193 64.0
BYD3_k127_7049706_0 Psort location CytoplasmicMembrane, score 10.00 - - - 4.985e-204 656.0
BYD3_k127_7049706_1 SprB repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008471 383.0
BYD3_k127_7049706_2 Pfam:DUF3308 - - - 0.000000000000000000000000000004556 132.0
BYD3_k127_7049706_3 Pkd domain containing protein - - - 0.000000003561 71.0
BYD3_k127_7073418_0 elongation factor G K02355 - - 1.559e-258 810.0
BYD3_k127_7073418_1 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000004776 239.0
BYD3_k127_7079099_0 Aerotolerance regulator N-terminal K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002091 392.0
BYD3_k127_7079099_1 Von Willebrand factor type A domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009706 359.0
BYD3_k127_7079099_2 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000000000000002775 157.0
BYD3_k127_7079099_3 tetratricopeptide repeat - - - 0.000000000000000000000000000001733 132.0
BYD3_k127_714334_0 IMP dehydrogenase / GMP reductase domain K00088 - 1.1.1.205 2.359e-243 758.0
BYD3_k127_714334_1 L-lysine 6-monooxygenase (NADPH-requiring) K00382 - 1.8.1.4 3.755e-235 733.0
BYD3_k127_714334_10 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000001055 113.0
BYD3_k127_714334_11 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.00000000000000001106 83.0
BYD3_k127_714334_12 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000000000001986 83.0
BYD3_k127_714334_2 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 7.268e-221 702.0
BYD3_k127_714334_3 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 606.0
BYD3_k127_714334_4 ArgK protein K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 465.0
BYD3_k127_714334_5 peptidyl-prolyl isomerase K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 472.0
BYD3_k127_714334_6 Peptidase M1 K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005553 439.0
BYD3_k127_714334_7 Protein of unknown function (DUF1573) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 301.0
BYD3_k127_714334_8 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.000000000000000000000000000000000000000000000000000000000000005313 225.0
BYD3_k127_714334_9 Gliding motility protein, GldB - - - 0.000000000000000000000000000000000000000000000000000000002314 212.0
BYD3_k127_715753_0 COG0604 NADPH quinone reductase and related Zn-dependent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008881 317.0
BYD3_k127_715753_1 - - - - 0.000000000000000000000000000000001095 132.0
BYD3_k127_715753_2 Domain of unknown function (DUF4142) - - - 0.0000000000000000000001134 106.0
BYD3_k127_7157673_0 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 - 4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 448.0
BYD3_k127_7157673_1 TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 432.0
BYD3_k127_7157673_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 383.0
BYD3_k127_7157673_3 Nucleotidyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003173 335.0
BYD3_k127_7157673_4 Ribosomal RNA adenine dimethylases K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 299.0
BYD3_k127_7157673_5 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 290.0
BYD3_k127_7157673_6 MgtE intracellular N domain K06213 - - 0.000000000000000000000000000000000000000000000000000000000000002325 222.0
BYD3_k127_7157673_7 NikR C terminal nickel binding domain K07722 - - 0.0000000000000000000000000000000000000001005 154.0
BYD3_k127_7157673_8 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000007215 110.0
BYD3_k127_7157673_9 Protein of unknown function (DUF3078) - - - 0.000000001872 62.0
BYD3_k127_7174854_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1182.0
BYD3_k127_7174854_1 self proteolysis - - - 0.0 1176.0
BYD3_k127_7174854_2 Glycosyl hydrolase family 3 K05349 - 3.2.1.21 1.026e-262 829.0
BYD3_k127_7174854_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 308.0
BYD3_k127_7174854_4 outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 296.0
BYD3_k127_7174854_5 MFS/sugar transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001425 286.0
BYD3_k127_7174854_6 rubredoxin - - - 0.00000000000000000000000000000000000000000000000000000000004375 210.0
BYD3_k127_7174854_7 COG NOG19114 non supervised orthologous group - - - 0.000000000000000000000000000000000006597 138.0
BYD3_k127_7174854_8 Glycosyl hydrolase family 115 - - - 0.00000007921 57.0
BYD3_k127_7189576_0 Sulfotransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002571 279.0
BYD3_k127_7189576_1 Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000001653 213.0
BYD3_k127_7189576_2 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion - - - 0.00000000000000000000000000000000000000000000000406 183.0
BYD3_k127_7189576_3 Uncharacterised nucleotidyltransferase - - - 0.0001298 49.0
BYD3_k127_7239156_0 lysine biosynthetic process via aminoadipic acid - - - 2.978e-203 652.0
BYD3_k127_7239156_1 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000179 274.0
BYD3_k127_7239156_2 CAAX protease self-immunity K07052 - - 0.0000000000000000001372 96.0
BYD3_k127_7239156_3 PFAM Peptidase family S41 - - - 0.0000000000009652 72.0
BYD3_k127_7269313_0 Psort location OuterMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008089 404.0
BYD3_k127_7269313_1 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005626 333.0
BYD3_k127_7269313_2 Xylose isomerase domain protein TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 309.0
BYD3_k127_7269313_3 phenazine biosynthesis K06998 - 5.3.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 301.0
BYD3_k127_7269313_4 permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004694 258.0
BYD3_k127_7269313_5 domain, Protein - - - 0.000000000000000000000000001748 123.0
BYD3_k127_7269590_0 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 314.0
BYD3_k127_7269590_1 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000000001741 216.0
BYD3_k127_7269590_2 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000009264 202.0
BYD3_k127_7269590_3 Domain of unknown function (DUF5020) - - - 0.0000000000000000000000000000000000000000000003504 175.0
BYD3_k127_7269590_4 CoA binding domain - - - 0.000000000000000000001155 100.0
BYD3_k127_7269590_5 - - - - 0.0000001207 61.0
BYD3_k127_7269590_6 Protein of unknown function (DUF3795) - - - 0.0000003026 51.0
BYD3_k127_7274347_0 TIGRFAM capsular exopolysaccharide family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 479.0
BYD3_k127_7274347_1 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000000000000000000000000000000000000000000000000000000000008631 235.0
BYD3_k127_7274347_2 beta-galactosidase activity - - - 0.00000000000000000000000000000000000000000000000003819 206.0
BYD3_k127_7274347_3 Parallel beta-helix repeats - - - 0.0000000000000000000000000000000005992 153.0
BYD3_k127_7274347_4 cellulose binding K15924 - 3.2.1.136 0.00000000000000000000008119 116.0
BYD3_k127_7274347_5 long-chain fatty acid transport protein - - - 0.000000002972 65.0
BYD3_k127_728127_0 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006797 553.0
BYD3_k127_728127_1 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 484.0
BYD3_k127_728127_2 outer membrane autotransporter barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000005045 224.0
BYD3_k127_7317574_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.0 1248.0
BYD3_k127_7317574_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 471.0
BYD3_k127_7317574_2 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009901 447.0
BYD3_k127_7317574_3 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006486 424.0
BYD3_k127_7317574_4 NAD(P)( ) transhydrogenase (AB-specific), alpha subunit K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008381 413.0
BYD3_k127_7317574_5 GTP cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 294.0
BYD3_k127_7317574_6 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.0000000000000000000000000000000000000000000000003559 183.0
BYD3_k127_7317574_7 Pyridine nucleotide transhydrogenase K00324 - 1.6.1.2 0.000000000000000000000000000000000000002712 149.0
BYD3_k127_7317574_8 metal cluster binding - - - 0.00000000000000000000000000000004938 132.0
BYD3_k127_732340_0 4Fe-4S single cluster domain K06871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 533.0
BYD3_k127_732340_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006676 507.0
BYD3_k127_732340_2 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000158 247.0
BYD3_k127_732340_3 HRDC domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000002762 238.0
BYD3_k127_732340_4 - - - - 0.00000000000000000000000000000000000000000000000000000000009147 212.0
BYD3_k127_732340_5 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000005791 158.0
BYD3_k127_7436683_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1332.0
BYD3_k127_7436683_1 Protein conserved in bacteria - - - 0.0 1072.0
BYD3_k127_7436683_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007754 464.0
BYD3_k127_7436683_3 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 377.0
BYD3_k127_7436683_4 Phosphotriesterase family K07048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004326 342.0
BYD3_k127_7436683_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001981 255.0
BYD3_k127_7436683_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000001253 232.0
BYD3_k127_7436683_7 - - - - 0.0000000000000000000000000000000002573 136.0
BYD3_k127_7436683_8 S23 ribosomal protein - - - 0.000000000000002827 76.0
BYD3_k127_7486186_0 Domain of unknown function (DUF4914) - - - 9.631e-312 966.0
BYD3_k127_7486186_1 GHKL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003748 411.0
BYD3_k127_7486186_2 Protein of unknown function (DUF5131) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 393.0
BYD3_k127_7486186_3 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 317.0
BYD3_k127_7486186_4 beta-galactosidase activity K05970 - 3.1.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008008 321.0
BYD3_k127_7486186_5 beta-galactosidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005995 303.0
BYD3_k127_7486186_6 Tfp pilus assembly protein tip-associated adhesin K02674,K14379 - 3.1.3.2 0.0000000000000000000000000000000000000000000000000006368 196.0
BYD3_k127_7486186_7 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000004283 147.0
BYD3_k127_7550211_0 Belongs to the DNA photolyase family K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 526.0
BYD3_k127_7550211_1 transferase activity, transferring glycosyl groups K13693 - 2.4.1.266 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004446 510.0
BYD3_k127_7550211_10 - - - - 0.0000007649 56.0
BYD3_k127_7550211_2 Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate K03473 - 1.1.1.290 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005265 422.0
BYD3_k127_7550211_3 Oxidoreductase, NAD-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005277 361.0
BYD3_k127_7550211_4 glycoside hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 342.0
BYD3_k127_7550211_5 Trypsin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007978 306.0
BYD3_k127_7550211_6 LysM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000006772 255.0
BYD3_k127_7550211_7 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000007036 165.0
BYD3_k127_7550211_9 ankyrin 3, node of Ranvier (ankyrin G) - - - 0.0000000000000000000000000000003959 139.0
BYD3_k127_7561351_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007702 454.0
BYD3_k127_7561351_1 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000003138 237.0
BYD3_k127_7561351_2 TamB, inner membrane protein subunit of TAM complex - - - 0.0000000000000000000000000000000000001137 156.0
BYD3_k127_7561351_3 Domain of unknown function (DUF1987) - - - 0.00000000000000000000000000001806 122.0
BYD3_k127_758293_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006671 410.0
BYD3_k127_758293_1 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 354.0
BYD3_k127_758293_2 cellulose binding - - - 0.0000000000000000003303 102.0
BYD3_k127_7593691_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 9.659e-311 962.0
BYD3_k127_7593691_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 8.006e-230 733.0
BYD3_k127_7593691_10 Acyl-CoA thioester hydrolase, YbgC YbaW family K07107 - - 0.0000000000000000000000000000000000000000006446 160.0
BYD3_k127_7593691_11 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000003735 149.0
BYD3_k127_7593691_12 Domain of unknown function (DUF4252) - - - 0.000000000000000000000001456 109.0
BYD3_k127_7593691_13 Domain of unknown function (DUF4252) - - - 0.00000000000001149 80.0
BYD3_k127_7593691_14 lyase activity - - - 0.00000002411 63.0
BYD3_k127_7593691_16 - - - - 0.00002172 53.0
BYD3_k127_7593691_17 30S ribosomal protein Thx - - - 0.0002841 48.0
BYD3_k127_7593691_2 ATPase (AAA K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 594.0
BYD3_k127_7593691_3 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 499.0
BYD3_k127_7593691_4 Belongs to the KdsA family K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004675 393.0
BYD3_k127_7593691_5 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 343.0
BYD3_k127_7593691_6 radical SAM domain protein K04070 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000002658 248.0
BYD3_k127_7593691_7 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000001409 215.0
BYD3_k127_7593691_8 haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000007039 184.0
BYD3_k127_7593691_9 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000000000000000000001114 181.0
BYD3_k127_7594746_0 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008249 340.0
BYD3_k127_7594746_1 Domain of unknown function (DUF3471) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001693 275.0
BYD3_k127_7594746_2 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000006201 208.0
BYD3_k127_7594746_3 - - - - 0.0000000000000000000000000000000000000000001876 168.0
BYD3_k127_7594746_4 - - - - 0.0000000000000000000000000000001419 131.0
BYD3_k127_7594746_5 transcriptional regulator - - - 0.000000000000000000005273 93.0
BYD3_k127_7618862_0 COG3209 Rhs family protein - - - 9.326e-314 1035.0
BYD3_k127_7618862_1 Histidine kinase-like ATPases K20971,K20974 - 2.7.13.3 2.126e-208 683.0
BYD3_k127_7618862_2 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003031 454.0
BYD3_k127_7618862_3 protein histidine kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 340.0
BYD3_k127_7618862_4 histidine kinase A domain protein - - - 0.00000000000000000000000007874 126.0
BYD3_k127_7618862_5 metal-dependent phosphohydrolase HD region K07814 - - 0.00000000000000000000005573 114.0
BYD3_k127_7618862_6 C-terminal domain of CHU protein family - - - 0.000000000000000000002107 106.0
BYD3_k127_7618862_7 HD domain K07814 - - 0.00000000000000000001339 95.0
BYD3_k127_7618862_8 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000001294 70.0
BYD3_k127_7632406_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003773 321.0
BYD3_k127_7632406_1 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001346 271.0
BYD3_k127_7632406_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.0000000000000000000000000000000000000000000001618 173.0
BYD3_k127_7632406_3 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase - - - 0.00000000000000000000000000000000000000000001382 166.0
BYD3_k127_7632406_4 - - - - 0.0000000000000000000000001775 111.0
BYD3_k127_7632406_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K05996,K06987,K07752 - 3.4.17.18,3.4.17.22 0.00000000008992 72.0
BYD3_k127_7632406_6 Belongs to the peptidase S8 family - - - 0.00007138 47.0
BYD3_k127_763630_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 7.424e-248 792.0
BYD3_k127_763630_1 N-terminal domain of unknown function (DUF4140) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 395.0
BYD3_k127_763630_10 GAF domain - - - 0.000000000000001177 86.0
BYD3_k127_763630_2 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000007099 261.0
BYD3_k127_763630_3 PFAM MCP methyltransferase CheR-type K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000461 255.0
BYD3_k127_763630_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001543 226.0
BYD3_k127_763630_5 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000002205 240.0
BYD3_k127_763630_6 PFAM MCP methyltransferase CheR-type K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000001799 183.0
BYD3_k127_763630_7 - - - - 0.00000000000000000000000000000000000000000001028 170.0
BYD3_k127_763630_8 Domain of unknown function (DUF1987) - - - 0.000000000000000000000000000000000000008612 147.0
BYD3_k127_763630_9 PFAM Nitroreductase - - - 0.0000000000000000000000003757 113.0
BYD3_k127_7648221_0 ATPase domain predominantly from Archaea - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 377.0
BYD3_k127_7648221_1 S-layer homology domain K01361 - 3.4.21.96 0.000000000000000000000000000000000000000001601 178.0
BYD3_k127_7648733_0 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000395 571.0
BYD3_k127_7648733_1 Elongator protein 3, MiaB family, Radical SAM K06936 - - 0.00000000000000000000000000000000000000000000000000000000000000111 225.0
BYD3_k127_7648733_2 Elongator protein 3, MiaB family, Radical SAM K06936 - - 0.00000000000000483 76.0
BYD3_k127_7648733_3 Elongator protein 3, MiaB family, Radical SAM K06936 - - 0.00000001747 56.0
BYD3_k127_7651693_0 Tex-like protein N-terminal domain K06959 - - 6.931e-316 981.0
BYD3_k127_7651693_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 2.39e-235 745.0
BYD3_k127_7651693_10 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000814 293.0
BYD3_k127_7651693_11 MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005119 283.0
BYD3_k127_7651693_12 Domain of unknown function (DUF4118) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005768 290.0
BYD3_k127_7651693_13 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001466 258.0
BYD3_k127_7651693_14 PBP superfamily domain K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000003027 246.0
BYD3_k127_7651693_15 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000002194 242.0
BYD3_k127_7651693_16 TonB-dependent Receptor Plug K02014 - - 0.000000000000000000000000000000000000000000000000000000001854 220.0
BYD3_k127_7651693_17 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000004291 202.0
BYD3_k127_7651693_18 Protein of unknown function, DUF255 - - - 0.0000000000000000000000000000000000000000000000000000003687 198.0
BYD3_k127_7651693_19 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000006659 190.0
BYD3_k127_7651693_2 Alpha-L-fucosidase K01206 - 3.2.1.51 1.211e-215 676.0
BYD3_k127_7651693_20 PFAM Tetratricopeptide - - - 0.000000000000000000000000000000000000000000009735 183.0
BYD3_k127_7651693_21 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000000000000000000001464 157.0
BYD3_k127_7651693_22 Putative auto-transporter adhesin, head GIN domain - - - 0.000000000000000000000000000000000000005586 154.0
BYD3_k127_7651693_23 PFAM Biopolymer transport protein ExbD TolR - - - 0.0000000000000000000000000000000000000128 152.0
BYD3_k127_7651693_24 PFAM Biopolymer transport protein ExbD TolR - - - 0.00000000000000000000000000000000000005326 150.0
BYD3_k127_7651693_25 Domain of unknown function (DUF4831) - - - 0.00000000000000000000000000000000007058 147.0
BYD3_k127_7651693_26 Protein of unknown function (DUF1573) - - - 0.000000000000000000000000000003428 124.0
BYD3_k127_7651693_3 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 515.0
BYD3_k127_7651693_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 493.0
BYD3_k127_7651693_5 Trypsin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000642 467.0
BYD3_k127_7651693_6 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005363 424.0
BYD3_k127_7651693_7 ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 374.0
BYD3_k127_7651693_8 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 355.0
BYD3_k127_7651693_9 PFAM ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 330.0
BYD3_k127_7696342_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 7.184e-204 642.0
BYD3_k127_7696342_1 Sigma factor PP2C-like phosphatases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008517 466.0
BYD3_k127_7696342_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 299.0
BYD3_k127_7696581_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01531 - 3.6.3.2 4.672e-300 945.0
BYD3_k127_7696581_1 PFAM von Willebrand factor type A domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 435.0
BYD3_k127_7696581_2 Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004022 346.0
BYD3_k127_7696581_3 Beta-lactamase K01286 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004712 307.0
BYD3_k127_7696581_4 IgGFc binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000002435 244.0
BYD3_k127_7696581_5 Protein of unknown function (DUF3788) - - - 0.0000000000000000001053 93.0
BYD3_k127_7696581_6 SPTR Cell surface protein K01186,K14274 - 3.2.1.18 0.00000002377 69.0
BYD3_k127_7696581_7 C-terminal domain of CHU protein family - - - 0.00002285 59.0
BYD3_k127_7696581_8 cellulase activity - - - 0.00003958 58.0
BYD3_k127_7709486_0 Belongs to the glycosyl hydrolase 2 family K01190 - 3.2.1.23 3.128e-285 893.0
BYD3_k127_7709486_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 1.469e-260 811.0
BYD3_k127_7709486_10 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.00000000000000000000000000001574 121.0
BYD3_k127_7709486_11 Flavodoxin domain - - - 0.00000000000006766 78.0
BYD3_k127_7709486_13 Transposase IS200 like - - - 0.000008697 50.0
BYD3_k127_7709486_14 Small Multidrug Resistance protein K11741 - - 0.0007843 43.0
BYD3_k127_7709486_2 Glycosyl hydrolase family 20, domain 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004875 520.0
BYD3_k127_7709486_3 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 477.0
BYD3_k127_7709486_4 Protein of unknown function (DUF819) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006628 298.0
BYD3_k127_7709486_5 asparagine synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000004539 248.0
BYD3_k127_7709486_6 Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA K01886 - 6.1.1.18 0.0000000000000000000000000000000000000000000000000002534 186.0
BYD3_k127_7709486_7 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000008802 160.0
BYD3_k127_7709486_8 - - - - 0.0000000000000000000000000000000000000009032 159.0
BYD3_k127_7709486_9 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000803 140.0
BYD3_k127_7711830_0 Fibronectin type III-like domain K05349 - 3.2.1.21 3.503e-307 972.0
BYD3_k127_7711830_1 heavy metal translocating P-type ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 9.165e-257 811.0
BYD3_k127_7711830_2 Voltage gated chloride channel K03281 - - 1.255e-206 658.0
BYD3_k127_7711830_3 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 527.0
BYD3_k127_7711830_4 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K01760 - 2.5.1.48,4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009741 458.0
BYD3_k127_7711830_5 PFAM chemotaxis K03406 - - 0.00000000000000000000000000000000000000000000000000001523 204.0
BYD3_k127_7711830_6 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000516 202.0
BYD3_k127_7711830_7 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000000001442 171.0
BYD3_k127_7711830_8 Cyclic nucleotide-monophosphate binding domain K21562 - - 0.000000000000000000000428 104.0
BYD3_k127_7711830_9 Leucine Rich repeats (2 copies) - - - 0.0000000002688 71.0
BYD3_k127_773820_0 Dienelactone hydrolase family - - - 1.189e-285 889.0
BYD3_k127_773820_1 - - - - 4.019e-228 722.0
BYD3_k127_773820_2 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 356.0
BYD3_k127_773820_3 Arylesterase K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006017 354.0
BYD3_k127_773820_4 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006495 319.0
BYD3_k127_773820_5 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009006 308.0
BYD3_k127_773820_6 Phosphorylase superfamily K00772 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000004615 228.0
BYD3_k127_773820_7 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000001118 149.0
BYD3_k127_7743939_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 7.773e-211 669.0
BYD3_k127_7743939_1 TRAM domain K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002537 604.0
BYD3_k127_7743939_2 Uncharacterized protein family UPF0004 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 493.0
BYD3_k127_7743939_3 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006284 442.0
BYD3_k127_7743939_4 Oxidoreductase FAD-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000005049 238.0
BYD3_k127_7847096_0 Psort location OuterMembrane, score 9.49 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009089 477.0
BYD3_k127_7847096_1 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000294 285.0
BYD3_k127_7847096_2 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000005051 237.0
BYD3_k127_7847096_3 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000001117 166.0
BYD3_k127_7847096_4 Transport energizing protein, ExbD TolR family K03559 - - 0.000000000000000000000000000000000000009163 148.0
BYD3_k127_7847096_5 TonB family domain protein - - - 0.000000000000000000000000000000000000185 151.0
BYD3_k127_7870430_0 Protein of unknown function (DUF2961) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 535.0
BYD3_k127_7870430_1 Pfam Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 466.0
BYD3_k127_7870430_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 - 1.13.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001025 273.0
BYD3_k127_7870430_3 pfam abc K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003118 259.0
BYD3_k127_7870430_4 transmembrane transport K01992 - - 0.0000000000000000000000000000000000000000000000000000000000001469 229.0
BYD3_k127_7870430_5 Protein of unknown function (DUF3795) - - - 0.00000000000000000000000000000000000000000000000002423 183.0
BYD3_k127_7870430_6 export protein - - - 0.000000000000000000000000000000000000000001953 165.0
BYD3_k127_7882376_0 Threonyl and Alanyl tRNA synthetase second additional domain K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.0 1057.0
BYD3_k127_7882376_1 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family K08138 - - 3.539e-243 757.0
BYD3_k127_7882376_10 Hydrolase, NUDIX family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000004882 213.0
BYD3_k127_7882376_11 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000001714 191.0
BYD3_k127_7882376_12 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000000000004289 183.0
BYD3_k127_7882376_13 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000009215 165.0
BYD3_k127_7882376_14 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000001845 162.0
BYD3_k127_7882376_15 Type IX secretion system membrane protein PorP/SprF - - - 0.0000000000000000000000000000000000000000002406 171.0
BYD3_k127_7882376_16 Large extracellular alpha-helical protein - - - 0.000000000000000000000000000000000000009389 166.0
BYD3_k127_7882376_17 Dihydroorotate dehydrogenase K00226 - 1.3.98.1 0.00000000000000000000000000002153 119.0
BYD3_k127_7882376_18 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000003478 86.0
BYD3_k127_7882376_2 Belongs to the xylose isomerase family K01805 - 5.3.1.5 1.317e-224 702.0
BYD3_k127_7882376_3 Carbohydrate kinase, FGGY family protein K00854 - 2.7.1.17 3.967e-220 692.0
BYD3_k127_7882376_4 peptidase K01278 - 3.4.14.5 7.696e-218 698.0
BYD3_k127_7882376_5 Beta-Casp domain K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 604.0
BYD3_k127_7882376_6 Peptidase S24-like K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000759 469.0
BYD3_k127_7882376_7 Belongs to the DapB family K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007024 290.0
BYD3_k127_7882376_8 Translation initiation factor IF-3, N-terminal domain K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000207 254.0
BYD3_k127_7882376_9 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007684 252.0
BYD3_k127_7924963_0 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01214 - 3.2.1.68 0.0 1097.0
BYD3_k127_7924963_1 AMP-binding enzyme C-terminal domain K00666 - - 1.234e-302 933.0
BYD3_k127_7924963_10 amino acid aldolase or racemase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 386.0
BYD3_k127_7924963_11 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 347.0
BYD3_k127_7924963_12 translation initiation inhibitor, yjgF family - - - 0.0000000000000000000000000000000000000000000000000000000000000006896 222.0
BYD3_k127_7924963_13 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000001306 210.0
BYD3_k127_7924963_14 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000005103 195.0
BYD3_k127_7924963_15 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000003302 98.0
BYD3_k127_7924963_16 YtxH-like protein - - - 0.0000000000000000006021 89.0
BYD3_k127_7924963_17 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.000000000000000004758 83.0
BYD3_k127_7924963_18 - - - - 0.0000000000000004233 82.0
BYD3_k127_7924963_19 ABC transporter, transmembrane region K06147 - - 0.0000000000000004548 83.0
BYD3_k127_7924963_2 Cytochrome c biogenesis protein - - - 2.769e-255 822.0
BYD3_k127_7924963_20 - - - - 0.0000000000000007332 81.0
BYD3_k127_7924963_21 - - - - 0.00000000000001013 81.0
BYD3_k127_7924963_22 - - - - 0.0000000000114 70.0
BYD3_k127_7924963_3 ABC transporter transmembrane region K06147 - - 1.667e-227 720.0
BYD3_k127_7924963_4 Belongs to the glycosyl hydrolase 13 family K01236 - 3.2.1.141 2.47e-200 640.0
BYD3_k127_7924963_5 ABC transporter transmembrane region K06147 - - 2.589e-195 618.0
BYD3_k127_7924963_6 H gluconate symporter and related K06155 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006936 561.0
BYD3_k127_7924963_7 NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 457.0
BYD3_k127_7924963_8 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000532 445.0
BYD3_k127_7924963_9 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 483.0
BYD3_k127_7925733_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01895 - 6.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004971 381.0
BYD3_k127_7925733_1 - - - - 0.000000000000000000000000000000000000000047 174.0
BYD3_k127_7925733_10 Domain of Unknown Function (DUF1080) - - - 0.000000007058 70.0
BYD3_k127_7925733_11 Periplasmic copper-binding protein (NosD) - - - 0.0000002545 64.0
BYD3_k127_7925733_2 - - - - 0.0000000000000000000000000000000000000002182 173.0
BYD3_k127_7925733_3 SMART LamG domain protein jellyroll fold domain protein - - - 0.000000000000000000000000000000000001213 160.0
BYD3_k127_7925733_4 SMART LamG domain protein jellyroll fold domain protein - - - 0.00000000000000000000000000000000000275 158.0
BYD3_k127_7925733_5 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000006131 139.0
BYD3_k127_7925733_6 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000003324 129.0
BYD3_k127_7925733_7 PFAM Fibronectin type III domain - - - 0.0000000000000000000000000002238 133.0
BYD3_k127_7925733_8 PFAM Fibronectin type III domain - - - 0.00000000000000001667 97.0
BYD3_k127_7925733_9 Fibronectin type III domain K03933 - - 0.000000002342 71.0
BYD3_k127_7945022_0 DNA helicase K03657 - 3.6.4.12 1.646e-269 850.0
BYD3_k127_7945022_1 Phage integrase, N-terminal SAM-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003842 326.0
BYD3_k127_7945022_2 Domain of unknown function (DUF4290) - - - 0.00000000000000000000000000000000001227 137.0
BYD3_k127_7968164_0 metalloendopeptidase activity K08602 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006465,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 1.48e-199 640.0
BYD3_k127_7968164_1 Alkylated DNA repair protein - - - 0.0000000000000000000000000000000000000000000000000000000000000524 219.0
BYD3_k127_7968164_2 Domain of unknown function (DUF4407) - - - 0.00000000000000000000000000000000000000000000000000000000000007013 221.0
BYD3_k127_7968164_3 - - - - 0.00000000000000000000000000000000000000000000000007517 181.0
BYD3_k127_7968164_4 - - - - 0.000000000000000000000000000000000003414 143.0
BYD3_k127_7968164_5 - - - - 0.00000000000000000002004 93.0
BYD3_k127_7970289_0 TonB-dependent receptor - - - 0.0 1323.0
BYD3_k127_7970289_1 Elongation factor Tu GTP binding domain K00955,K00956 - 2.7.1.25,2.7.7.4 3.441e-198 627.0
BYD3_k127_7970289_2 7TM-HD extracellular K07037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006405 619.0
BYD3_k127_7970289_3 TIGRFAM sulfate adenylyltransferase, small subunit K00957 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000326 526.0
BYD3_k127_7970289_4 Starch-binding associating with outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 519.0
BYD3_k127_7970289_5 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000005981 226.0
BYD3_k127_7970289_6 Catalyzes the synthesis of activated sulfate K00860 GO:0003674,GO:0003824,GO:0004020,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237 2.7.1.25 0.0000000000000000000000000000000000000000000000000000000001088 210.0
BYD3_k127_7970289_7 PFAM NlpC P60 family - - - 0.000000000000000000000000000000000000000000000000000000005023 207.0
BYD3_k127_7974133_0 AcrB/AcrD/AcrF family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 552.0
BYD3_k127_7974133_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003703 323.0
BYD3_k127_7974133_2 - - - - 0.0000000000000000000000000000000000000000002212 164.0
BYD3_k127_801300_0 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004453 445.0
BYD3_k127_801300_1 protein histidine kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 374.0
BYD3_k127_801300_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000004222 262.0
BYD3_k127_801300_3 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000004231 196.0
BYD3_k127_801300_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03406 - - 0.0000000000000000000000001637 124.0
BYD3_k127_8027976_0 PFAM Bacterial alpha-L-rhamnosidase K05989 - 3.2.1.40 0.0 1353.0
BYD3_k127_8027976_1 Bacterial alpha-L-rhamnosidase C-terminal domain - - - 5.454e-311 973.0
BYD3_k127_8027976_2 Anaerobic sulfatase maturase K06871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009644 486.0
BYD3_k127_8027976_3 Belongs to the glycosyl hydrolase 43 family K15921 - 3.2.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008432 477.0
BYD3_k127_8027976_4 NAD(P)H dehydrogenase (quinone) activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 336.0
BYD3_k127_8027976_5 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 344.0
BYD3_k127_8070390_0 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009688 285.0
BYD3_k127_8070390_1 ABC transporter, ATP-binding protein K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005986 278.0
BYD3_k127_8070390_2 glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003586 251.0
BYD3_k127_8070390_3 Domain of unknown function (DUF4956) - - - 0.000000000000000000000000000000000000000000000000000000000005289 214.0
BYD3_k127_8070390_4 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000001389 205.0
BYD3_k127_8070390_5 VTC domain - - - 0.000000000000000000000000000000000000000000000003076 181.0
BYD3_k127_8070390_6 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000009519 135.0
BYD3_k127_8070390_7 Protein of unknown function (DUF2490) - - - 0.0000005435 59.0
BYD3_k127_8072401_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1243.0
BYD3_k127_8072401_1 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 2.227e-279 865.0
BYD3_k127_8072401_10 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000009903 231.0
BYD3_k127_8072401_11 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000004615 231.0
BYD3_k127_8072401_12 GAF domain-containing protein K08968 - 1.8.4.14 0.0000000000000000000000000000000000000000000000002656 179.0
BYD3_k127_8072401_13 Cyclic nucleotide-monophosphate binding domain K21562 - - 0.000000000000000000000000000000000000000001866 165.0
BYD3_k127_8072401_14 Transcriptional regulator - - - 0.000000000000000000000000000000000000000003503 159.0
BYD3_k127_8072401_15 Pfam YceI-like domain - - - 0.0000000000000000000000000003365 121.0
BYD3_k127_8072401_16 RF-1 domain K15034 - - 0.00000000000000000000000000115 115.0
BYD3_k127_8072401_17 Belongs to the UPF0312 family - - - 0.000000000000000000000000004084 119.0
BYD3_k127_8072401_18 COG0642 Signal transduction histidine kinase - - - 0.000000000000000000006128 96.0
BYD3_k127_8072401_19 - - - - 0.000000000000000000008431 97.0
BYD3_k127_8072401_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 566.0
BYD3_k127_8072401_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003435 468.0
BYD3_k127_8072401_4 Domain of unknown function K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005289 413.0
BYD3_k127_8072401_5 tyrosine recombinase XerC K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 376.0
BYD3_k127_8072401_6 Psort location Cytoplasmic, score 8.96 K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007112 317.0
BYD3_k127_8072401_7 DoxX - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005852 308.0
BYD3_k127_8072401_8 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001371 283.0
BYD3_k127_8072401_9 Biogenesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000008004 231.0
BYD3_k127_8097134_0 Ammonium Transporter K03320 - - 1.169e-203 642.0
BYD3_k127_8097134_1 Elongation factor G C-terminus K06207 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006491 344.0
BYD3_k127_8097134_2 Mechanosensitive ion channel K16053 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 344.0
BYD3_k127_8097134_3 Belongs to the P(II) protein family K04751 - - 0.00000000000000000000000000000000000000000000006688 171.0
BYD3_k127_8097134_4 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000003694 152.0
BYD3_k127_8097134_5 Peptidyl-prolyl cis-trans K03773 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005527,GO:0005528,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0042597,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097159,GO:0140096,GO:1901363,GO:1901564 5.2.1.8 0.0000000000000000000000000000007501 122.0
BYD3_k127_8097134_6 - - - - 0.00000000000000000008732 93.0
BYD3_k127_8097134_7 - - - - 0.00005235 51.0
BYD3_k127_8097617_0 Belongs to the glycosyl hydrolase 2 family - - - 1.998e-284 884.0
BYD3_k127_8097617_1 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007412 563.0
BYD3_k127_8097617_2 transcriptional regulator - - - 0.00000000000000000000000000000007943 126.0
BYD3_k127_8097617_3 - - - - 0.000000001513 64.0
BYD3_k127_8100041_0 TonB-linked outer membrane protein, SusC RagA family - - - 3e-323 1024.0
BYD3_k127_8100041_1 COG NOG26302 non supervised orthologous group K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 519.0
BYD3_k127_8100041_2 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000007007 182.0
BYD3_k127_8100041_3 Domain of unknown function (DUF4974) - - - 0.000000000000000000000000000000000000000000007561 178.0
BYD3_k127_8100041_4 RNA polymerase sigma-70 factor K03088 - - 0.00000000000000000000000001371 116.0
BYD3_k127_8100041_5 PFAM RibD C-terminal domain K00287 - 1.5.1.3 0.000000004777 57.0
BYD3_k127_8100041_6 COGs COG2801 Transposase and inactivated derivatives - - - 0.00003522 46.0
BYD3_k127_8104706_0 DNA ligase K01971 - 6.5.1.1 0.0 1262.0
BYD3_k127_8104706_1 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 329.0
BYD3_k127_8104706_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007062 282.0
BYD3_k127_8104706_3 YtkA-like - - - 0.00000000000000000000000000000000000000002162 161.0
BYD3_k127_8130759_0 hydrogen-translocating pyrophosphatase activity K01507,K15987 - 3.6.1.1 0.0 1040.0
BYD3_k127_8130759_1 arsenite transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 571.0
BYD3_k127_8130759_10 Tubulin/FtsZ family, C-terminal domain K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001059 256.0
BYD3_k127_8130759_11 Cell division protein FtsQ K03589 - - 0.000000000000000000000000000000000000000000000001415 184.0
BYD3_k127_8130759_12 Glutamyl-tRNA amidotransferase K09117 - - 0.000000000000000000000000000000000000000000006443 167.0
BYD3_k127_8130759_13 MacB-like periplasmic core domain K02004,K09808 - - 0.00000005049 54.0
BYD3_k127_8130759_2 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003605 477.0
BYD3_k127_8130759_3 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 470.0
BYD3_k127_8130759_4 COG4591 ABC-type transport system, involved in lipoprotein release, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 464.0
BYD3_k127_8130759_5 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 418.0
BYD3_k127_8130759_6 Cell cycle protein K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 357.0
BYD3_k127_8130759_7 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 326.0
BYD3_k127_8130759_8 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003221 320.0
BYD3_k127_8130759_9 Tubulin/FtsZ family, C-terminal domain K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002664 249.0
BYD3_k127_8198435_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 4.562e-263 820.0
BYD3_k127_8198435_1 Carboxypeptidase regulatory-like domain - - - 1.872e-219 705.0
BYD3_k127_8198435_10 Phosphopantetheine attachment site K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000000000000000008106 139.0
BYD3_k127_8198435_11 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000001083 111.0
BYD3_k127_8198435_12 - - - - 0.00000000000001783 79.0
BYD3_k127_8198435_13 Cytochrome c - - - 0.00005725 48.0
BYD3_k127_8198435_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 5.587e-196 618.0
BYD3_k127_8198435_3 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008562 327.0
BYD3_k127_8198435_4 ATPase histidine kinase DNA gyrase B HSP90 domain protein K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006531 328.0
BYD3_k127_8198435_5 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000002626 243.0
BYD3_k127_8198435_6 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000007648 214.0
BYD3_k127_8198435_7 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000006104 212.0
BYD3_k127_8198435_8 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.000000000000000000000000000000000000000178 156.0
BYD3_k127_8198435_9 Biopolymer transport protein ExbD TolR K03559 - - 0.0000000000000000000000000000000000000009613 151.0
BYD3_k127_8225740_0 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 1.25e-262 817.0
BYD3_k127_8225740_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 3.056e-228 717.0
BYD3_k127_8225740_2 Metallopeptidase family M24 K01262,K01271 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009056,GO:0009987,GO:0016787,GO:0016805,GO:0019538,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0070573,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.11.9,3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 501.0
BYD3_k127_8225740_3 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 462.0
BYD3_k127_8225740_4 Aldo Keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005729 419.0
BYD3_k127_8225740_5 Aminopeptidase K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006862 271.0
BYD3_k127_8225740_6 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000000000000000000000000000001137 210.0
BYD3_k127_8225740_7 Psort location Cytoplasmic, score 8.96 - - - 0.00000000000000000000000000000000000000000000000000000001144 206.0
BYD3_k127_8245207_0 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002443 498.0
BYD3_k127_8245207_1 COGs COG0620 Methionine synthase II (cobalamin-independent) K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005605 468.0
BYD3_k127_8245207_10 SnoaL-like polyketide cyclase - - - 0.0000000000000000000000000000000000000000475 158.0
BYD3_k127_8245207_11 COG1121 ABC-type Mn Zn transport systems ATPase component K11710,K19973 - 3.6.3.35 0.00000000000000000007514 92.0
BYD3_k127_8245207_12 - - - - 0.00000000000000000119 91.0
BYD3_k127_8245207_14 Phospholipid methyltransferase - - - 0.00000002368 61.0
BYD3_k127_8245207_15 general stress protein - - - 0.000003276 55.0
BYD3_k127_8245207_16 - - - - 0.0008379 49.0
BYD3_k127_8245207_2 Zinc-uptake complex component A periplasmic K09815,K11707 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 383.0
BYD3_k127_8245207_3 mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006014 304.0
BYD3_k127_8245207_4 PFAM chalcone and stilbene - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004915 298.0
BYD3_k127_8245207_5 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000373 284.0
BYD3_k127_8245207_6 PFAM UbiA prenyltransferase family K02548 - 2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000002054 252.0
BYD3_k127_8245207_7 dependent repressor K03709 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003096 246.0
BYD3_k127_8245207_8 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000002328 198.0
BYD3_k127_8245207_9 Predicted permease - - - 0.000000000000000000000000000000000000000002224 166.0
BYD3_k127_8274254_0 Outer membrane protein beta-barrel family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 629.0
BYD3_k127_8274254_1 FAD-binding protein K07137 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 588.0
BYD3_k127_8274254_10 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.0000000000000000000000000000000000000000001154 162.0
BYD3_k127_8274254_11 Uncharacterized ACR, COG1993 K09137 - - 0.00000000000000000000000000000000000002465 146.0
BYD3_k127_8274254_12 - - - - 0.00000000000000000000000000000002579 142.0
BYD3_k127_8274254_13 Surface antigen - - - 0.0000000000000000000004974 100.0
BYD3_k127_8274254_14 Antibiotic biosynthesis monooxygenase - GO:0003674,GO:0003824 - 0.0000000000000001583 84.0
BYD3_k127_8274254_2 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006478 593.0
BYD3_k127_8274254_3 Oligoendopeptidase f - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 553.0
BYD3_k127_8274254_4 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 434.0
BYD3_k127_8274254_5 Nitroreductase family K19285,K19286 - 1.5.1.38,1.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 327.0
BYD3_k127_8274254_6 Oligoendopeptidase f - - - 0.0000000000000000000000000000000000000000000000000000000000000002046 229.0
BYD3_k127_8274254_7 Domain of unknown function (DUF4249) - - - 0.00000000000000000000000000000000000000000000000000000000001677 216.0
BYD3_k127_8274254_8 RNA methyltransferase K03437 - - 0.000000000000000000000000000000000000000000000000000000002291 209.0
BYD3_k127_8274254_9 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000004706 181.0
BYD3_k127_827859_0 alpha-glucan phosphorylase K00688,K00691,K16153 - 2.4.1.1,2.4.1.11,2.4.1.8 0.0 1542.0
BYD3_k127_827859_1 Glycogen debranching enzyme - - - 6.063e-248 782.0
BYD3_k127_827859_10 alkyl hydroperoxide reductase - - - 0.000000000000000000000000000000000000000000000000000000001424 215.0
BYD3_k127_827859_11 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000002295 162.0
BYD3_k127_827859_12 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000004637 154.0
BYD3_k127_827859_13 single-stranded-DNA-specific exonuclease recJ K07462 - - 0.000000000000003992 76.0
BYD3_k127_827859_2 Belongs to the glycosyl hydrolase 57 family K07405 - 3.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009017 613.0
BYD3_k127_827859_3 Starch synthase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008035 583.0
BYD3_k127_827859_4 COG1055 Na H antiporter NhaD and related arsenite - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 453.0
BYD3_k127_827859_5 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004743 428.0
BYD3_k127_827859_6 MacB-like periplasmic core domain K02004,K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 408.0
BYD3_k127_827859_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 407.0
BYD3_k127_827859_8 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 317.0
BYD3_k127_827859_9 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 308.0
BYD3_k127_832008_0 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 2.945e-214 687.0
BYD3_k127_832008_1 Belongs to the glycosyl hydrolase 1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009673 564.0
BYD3_k127_832008_2 UDP-galactopyranose mutase K01854 - 5.4.99.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000536 522.0
BYD3_k127_832008_3 PFAM UDP-galactopyranose mutase K01854 - 5.4.99.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 417.0
BYD3_k127_832008_4 Domain of Unknown Function (DUF748) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003693 343.0
BYD3_k127_832008_5 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 318.0
BYD3_k127_832008_6 two component, sigma54 specific, transcriptional regulator, Fis family K07713 - - 0.0000000000000000000000000000000000000000002937 162.0
BYD3_k127_8340548_0 PFAM Uncharacterised protein family UPF0324 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 434.0
BYD3_k127_8340548_1 Transposase - - - 0.000000000000000000000000000000000000000000000244 179.0
BYD3_k127_8340548_2 Phosphate-selective porin O and P - - - 0.00000000000000000000000000000000001657 149.0
BYD3_k127_8343283_0 peptidase K01278 - 3.4.14.5 5.555e-306 953.0
BYD3_k127_8343283_1 1,4-alpha-glucan branching enzyme K00700 - 2.4.1.18 9.904e-290 903.0
BYD3_k127_8343283_10 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005217 295.0
BYD3_k127_8343283_11 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005972 249.0
BYD3_k127_8343283_12 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000001417 236.0
BYD3_k127_8343283_13 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000002771 145.0
BYD3_k127_8343283_14 TonB-dependent Receptor Plug Domain - - - 0.00000000004922 72.0
BYD3_k127_8343283_15 Domain of unknown function (DUF4249) - - - 0.00000001645 66.0
BYD3_k127_8343283_2 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 1.562e-262 813.0
BYD3_k127_8343283_3 TonB-dependent receptor plug domain - - - 2.289e-198 649.0
BYD3_k127_8343283_4 Bacterial protein of unknown function (DUF853) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007468 610.0
BYD3_k127_8343283_5 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 518.0
BYD3_k127_8343283_6 Dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008479 449.0
BYD3_k127_8343283_7 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 418.0
BYD3_k127_8343283_8 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006836 406.0
BYD3_k127_8343283_9 DJ-1/PfpI family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 338.0
BYD3_k127_8368323_0 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 3.386e-224 709.0
BYD3_k127_8368323_1 Belongs to the SEDS family K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004504 407.0
BYD3_k127_8368323_2 Actin K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000004586 233.0
BYD3_k127_8368323_3 shape-determining protein MreC K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000004914 237.0
BYD3_k127_8368323_4 rod shape-determining protein MreD - - - 0.0000000000000000000000000000000000000000001909 164.0
BYD3_k127_8380491_0 TonB-linked outer membrane protein, SusC RagA family - - - 0.0 1282.0
BYD3_k127_8380491_1 SusD family K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 578.0
BYD3_k127_8380491_2 Domain of unknown function (DUF4832) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 513.0
BYD3_k127_8380491_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002141 254.0
BYD3_k127_8380491_4 Domain of unknown function (DUF4974) - - - 0.000000000000000000000000000000000000000000000000000000000006916 220.0
BYD3_k127_8380491_5 ECF sigma factor K03088 - - 0.0000000000000000000000000000000000000001269 157.0
BYD3_k127_8380491_6 COG NOG32048 non supervised orthologous group K21572 - - 0.000000000000000000003297 96.0
BYD3_k127_8445192_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1248.0
BYD3_k127_8445192_1 Belongs to the glycosyl hydrolase 2 family K01190 - 3.2.1.23 0.0 1032.0
BYD3_k127_8445192_2 Hexokinase K00844 - 2.7.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 479.0
BYD3_k127_8445192_3 Xylose isomerase domain protein TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006073 401.0
BYD3_k127_8445192_4 outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 374.0
BYD3_k127_8445192_5 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004264 349.0
BYD3_k127_8445192_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 329.0
BYD3_k127_8445192_7 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.0000000000000000000000000000000000000000000000000000000000000000113 226.0
BYD3_k127_8447037_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 2.855e-296 929.0
BYD3_k127_8447037_1 ABC transporter, ATP-binding protein K06158 - - 1.228e-242 765.0
BYD3_k127_8447037_2 Major Facilitator Superfamily K08177 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002928 430.0
BYD3_k127_8447037_3 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009659 365.0
BYD3_k127_8447037_4 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 299.0
BYD3_k127_8447037_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006828 258.0
BYD3_k127_8447037_6 Appr-1'-p processing enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000001267 231.0
BYD3_k127_8447037_7 Stage II sporulation protein K06381 - - 0.0000000000000000000000000000000000000000000000000000000000004802 225.0
BYD3_k127_8447037_8 TIGRFAM Methylglyoxal synthase K01734 - 4.2.3.3 0.000000000000000000000000000000000000000000000000000000000004966 211.0
BYD3_k127_8447037_9 Aminotransferase K00812 - 2.6.1.1 0.0000000000000000000000000000000000000001871 152.0
BYD3_k127_8451803_0 Bacterial DNA topoisomeraes I ATP-binding domain K03168 - 5.99.1.2 7.019e-312 972.0
BYD3_k127_8451803_1 Penicillin-binding Protein K05366 - 2.4.1.129,3.4.16.4 1.513e-257 816.0
BYD3_k127_8451803_10 Domain of unknown function (DUF1987) - - - 0.000000000000000002654 89.0
BYD3_k127_8451803_2 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000472 597.0
BYD3_k127_8451803_3 SIS domain K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 565.0
BYD3_k127_8451803_4 synthase K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 360.0
BYD3_k127_8451803_5 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 334.0
BYD3_k127_8451803_6 Belongs to the arginase family K01479 - 3.5.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000876 306.0
BYD3_k127_8451803_7 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000004745 205.0
BYD3_k127_8451803_8 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000000000000000000006367 194.0
BYD3_k127_8451803_9 Cytidylyltransferase-like K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000001168 197.0
BYD3_k127_8455288_0 ATPase family associated with various cellular activities (AAA) K03696 - - 0.0 1192.0
BYD3_k127_8455288_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1182.0
BYD3_k127_8455288_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000001248 222.0
BYD3_k127_8455288_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000001805 187.0
BYD3_k127_8455288_4 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000001159 106.0
BYD3_k127_8460363_0 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 435.0
BYD3_k127_8460363_1 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 325.0
BYD3_k127_8460363_2 PFAM Uncharacterised protein family UPF0029, Impact, N-terminal - - - 0.000000000000000000000000000002796 121.0
BYD3_k127_8463765_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 492.0
BYD3_k127_8463765_1 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008837 399.0
BYD3_k127_8463765_2 Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005612 361.0
BYD3_k127_8463765_3 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 298.0
BYD3_k127_847587_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 368.0
BYD3_k127_847587_1 AsmA-like C-terminal region - - - 0.000000000000000000000000000000000001044 154.0
BYD3_k127_847587_2 ribonuclease P activity K03536,K08998 GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031123,GO:0031404,GO:0031974,GO:0031981,GO:0032991,GO:0033204,GO:0034414,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042301,GO:0042779,GO:0042780,GO:0042781,GO:0043167,GO:0043168,GO:0043170,GO:0043199,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043628,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901681,GO:1902494,GO:1902555,GO:1905267,GO:1905348,GO:1990904 3.1.26.5 0.000000000000004712 79.0
BYD3_k127_8487812_0 Belongs to the glycosyl hydrolase 2 family K15855 - 3.2.1.165 3.36e-299 941.0
BYD3_k127_8487812_1 AsmA-like C-terminal region K07289 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 594.0
BYD3_k127_8487812_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006852 544.0
BYD3_k127_8487812_3 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 515.0
BYD3_k127_8487812_4 PFAM ROK family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007404 327.0
BYD3_k127_8487812_5 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005319 323.0
BYD3_k127_8487812_6 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000004698 202.0
BYD3_k127_8487812_7 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000001501 203.0
BYD3_k127_8487812_8 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000001285 125.0
BYD3_k127_8536775_0 Putative carbohydrate binding domain K00702 - 2.4.1.20 0.0 1174.0
BYD3_k127_8536775_1 polysaccharide deacetylase K01179 - 3.2.1.4 1.435e-234 740.0
BYD3_k127_8536775_10 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000000000000003758 117.0
BYD3_k127_8536775_2 Sodium:solute symporter family - - - 1.535e-229 726.0
BYD3_k127_8536775_3 Belongs to the helicase family. UvrD subfamily - - - 1.913e-217 712.0
BYD3_k127_8536775_4 Cellulase N-terminal ig-like domain K01179 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0016052,GO:0016787,GO:0016798,GO:0033946,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0052736,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009615 529.0
BYD3_k127_8536775_5 TIGRFAM glucose galactose transporter K02429 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 501.0
BYD3_k127_8536775_6 Radical_SAM C-terminal domain K07139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 337.0
BYD3_k127_8536775_7 Hydrolase, NUDIX family K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001424 272.0
BYD3_k127_8536775_8 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000002429 216.0
BYD3_k127_8536775_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000008362 164.0
BYD3_k127_8614713_0 Domain of unknown function (DUF5009) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008033 447.0
BYD3_k127_8614713_1 D-isomer specific 2-hydroxyacid dehydrogenase K03778 - 1.1.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 416.0
BYD3_k127_8614713_2 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001391 246.0
BYD3_k127_8614713_3 Oligoendopeptidase f K01283 - 3.4.15.1 0.00000000000000000000000000000000000000000000000001082 183.0
BYD3_k127_8614713_4 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.0000000000000000000000000000000000000000000000002274 182.0
BYD3_k127_8614713_5 PFAM Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000059 104.0
BYD3_k127_8614713_6 4Fe-4S single cluster domain of Ferredoxin I - - - 0.000000000000000001108 86.0
BYD3_k127_8640501_0 IgGFc binding protein - - - 0.00000000000000000000000000000000000000001588 166.0
BYD3_k127_8640501_1 COG3209 Rhs family protein - - - 0.00000000000000000000000000003474 135.0
BYD3_k127_8640501_2 BNR Asp-box repeat K01186 - 3.2.1.18 0.00004128 57.0
BYD3_k127_8669923_0 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007199 559.0
BYD3_k127_8669923_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 411.0
BYD3_k127_8669923_2 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003769 275.0
BYD3_k127_8669923_3 Two component regulator three Y domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001411 264.0
BYD3_k127_8669923_4 nucleotide phosphatase activity, acting on free nucleotides K00943,K02013,K02017,K03574,K03752,K06928 - 2.7.4.9,2.7.7.77,3.6.1.15,3.6.1.55,3.6.3.29,3.6.3.34 0.00000000000000000000000000000000000000000000000000000000007489 225.0
BYD3_k127_8681930_0 Renal dipeptidase family protein K01273,K01274 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000779 426.0
BYD3_k127_8681930_1 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005737 364.0
BYD3_k127_8681930_2 helix_turn_helix ASNC type K03718 - - 0.00000000000000000000000000000000000000000000000000000012 199.0
BYD3_k127_8681930_3 PFAM NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000002488 178.0
BYD3_k127_8681930_4 COG NOG16874 non supervised orthologous group - - - 0.00000000000000000000000000000009827 129.0
BYD3_k127_8691475_0 PFAM SusD family K21572 - - 4.601e-215 678.0
BYD3_k127_8691475_1 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005504 544.0
BYD3_k127_8691475_2 Maltogenic Amylase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 515.0
BYD3_k127_8691475_3 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.000000000000000000000000000000000000000000000000000000000565 205.0
BYD3_k127_8691475_4 SusE outer membrane protein K21571 - - 0.000000000000000000000000000000000000000000000000000000001139 214.0
BYD3_k127_8691475_5 CoA binding domain K06929 - - 0.000000000000000000000000000002501 124.0
BYD3_k127_8691475_6 Psort location OuterMembrane, score - - - 0.00000000004749 64.0
BYD3_k127_8692171_0 Memo-like protein K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006966 460.0
BYD3_k127_8692171_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 290.0
BYD3_k127_8692171_2 chaperone-mediated protein folding - - - 0.0000000000000000000000000000000000000000000000003163 183.0
BYD3_k127_8692171_3 NigD-like N-terminal OB domain - - - 0.00000000000000000000426 100.0
BYD3_k127_873367_0 peroxiredoxin activity - - - 3.753e-218 692.0
BYD3_k127_873367_1 Glycosyl hydrolase family 20, domain 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003705 419.0
BYD3_k127_873367_2 electron transport chain K00347,K03614,K21163 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000002348 268.0
BYD3_k127_873367_3 Outer membrane protein beta-barrel family - - - 0.000000000000000000000000000000000000000000000000000003763 216.0
BYD3_k127_873367_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000002358 185.0
BYD3_k127_873367_5 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000000000000000001816 113.0
BYD3_k127_873367_6 - - - - 0.000000000003161 77.0
BYD3_k127_8786567_0 Selenocysteine lyase - - - 1.54e-211 666.0
BYD3_k127_8786567_1 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 510.0
BYD3_k127_8786567_2 Psort location Cytoplasmic, score 8.96 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004617 394.0
BYD3_k127_8786567_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000009543 217.0
BYD3_k127_8786823_0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00262 GO:0005575,GO:0005623,GO:0009986,GO:0044464 1.4.1.4 4.354e-209 658.0
BYD3_k127_8786823_1 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 353.0
BYD3_k127_8786823_2 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005543 273.0
BYD3_k127_8786823_3 - - - - 0.000000000000000000000000000000000000001881 154.0
BYD3_k127_8786823_4 PFAM Peptidase M56, BlaR1 - - - 0.0000000000000000000000000000000000000722 163.0
BYD3_k127_8788880_0 TonB-linked outer membrane protein, SusC RagA family - - - 0.0 1195.0
BYD3_k127_8788880_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 434.0
BYD3_k127_8788880_10 Opacity protein - - - 0.000001101 58.0
BYD3_k127_8788880_2 SusD family K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 419.0
BYD3_k127_8788880_3 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 423.0
BYD3_k127_8788880_4 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 367.0
BYD3_k127_8788880_5 OmpA family K03286 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 329.0
BYD3_k127_8788880_6 photoreceptor activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009067 260.0
BYD3_k127_8788880_7 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000002332 186.0
BYD3_k127_8788880_8 Domain of unknown function (DUF5004) - - - 0.0000000000000000000000000000000000000000002564 164.0
BYD3_k127_8788880_9 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01537 - 3.6.3.8 0.0000000000000000000000000000000000000000005865 160.0
BYD3_k127_8829119_0 PFAM Tetratricopeptide - - - 1.769e-231 752.0
BYD3_k127_8829119_1 Psort location OuterMembrane, score - - - 0.000000000000000000000000000000000000000000000000006562 196.0
BYD3_k127_8829119_2 Protein of unknown function, DUF481 - - - 0.000000000000000000000000000000000000000000000007998 184.0
BYD3_k127_8829119_3 Protein conserved in bacteria - - - 0.0000000001114 63.0
BYD3_k127_8860280_0 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002942 554.0
BYD3_k127_8860280_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 315.0
BYD3_k127_8860280_2 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000004957 168.0
BYD3_k127_8892188_0 Carboxyl transferase domain - - - 4.837e-271 840.0
BYD3_k127_8892188_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 538.0
BYD3_k127_8892188_10 4Fe-4S binding domain - - - 0.0000000000000000000006419 95.0
BYD3_k127_8892188_11 membrane transporter protein K07090 - - 0.0000000000000001297 81.0
BYD3_k127_8892188_12 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.000000000008448 66.0
BYD3_k127_8892188_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006522 529.0
BYD3_k127_8892188_3 Permease, YjgP YjgQ family K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 382.0
BYD3_k127_8892188_4 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005605 312.0
BYD3_k127_8892188_5 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 291.0
BYD3_k127_8892188_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007383 245.0
BYD3_k127_8892188_7 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.000000000000000000000000000000000000000000000000000000000000000001564 233.0
BYD3_k127_8892188_8 AhpC Tsa family K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000002193 206.0
BYD3_k127_8892188_9 Biotin-requiring enzyme - - - 0.000000000000000000000001805 106.0
BYD3_k127_8907771_0 Fn3 associated - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005517 347.0
BYD3_k127_8907771_1 PFAM Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000001804 131.0
BYD3_k127_8907771_2 Outer membrane efflux protein - - - 0.000000000000000000000952 102.0
BYD3_k127_8912777_0 chaperone-mediated protein folding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005572 372.0
BYD3_k127_8912777_1 SusD family K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007967 331.0
BYD3_k127_8912777_2 - - - - 0.0001407 48.0
BYD3_k127_8924769_0 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002979 467.0
BYD3_k127_8924769_1 TonB-dependent Receptor Plug - - - 0.000000000000000001038 88.0
BYD3_k127_8924769_2 Protein of unknown function, DUF255 K06888 - - 0.00000001186 65.0
BYD3_k127_8924769_3 LytTr DNA-binding domain - - - 0.000007976 48.0
BYD3_k127_8970548_0 FAD linked oxidases, C-terminal domain - - - 0.0 1122.0
BYD3_k127_8970548_1 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 558.0
BYD3_k127_8970548_10 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001639 250.0
BYD3_k127_8970548_11 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005495 243.0
BYD3_k127_8970548_12 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000006366 215.0
BYD3_k127_8970548_13 - - - - 0.000000000000000000000000000000000000000000000000000003637 204.0
BYD3_k127_8970548_14 Psort location Cytoplasmic, score 8.96 - - - 0.000000000000000000000000000000000000000000000002934 187.0
BYD3_k127_8970548_15 - - - - 0.0000000000000002823 86.0
BYD3_k127_8970548_16 tetratricopeptide repeat - - - 0.0000000000005548 78.0
BYD3_k127_8970548_17 - - - - 0.00000000005234 69.0
BYD3_k127_8970548_2 belongs to the CobB CobQ family K00625,K13788 - 2.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 466.0
BYD3_k127_8970548_3 Belongs to the acetokinase family K00929 - 2.7.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004759 457.0
BYD3_k127_8970548_4 Threonine aldolase K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009725 432.0
BYD3_k127_8970548_5 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 420.0
BYD3_k127_8970548_6 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 436.0
BYD3_k127_8970548_7 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 407.0
BYD3_k127_8970548_8 3-hydroxybutyryl-CoA dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008977 389.0
BYD3_k127_8970548_9 Phosphate acetyl/butaryl transferase K00634 - 2.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006171 311.0
BYD3_k127_898679_0 Glycosyl hydrolase family 3 K05349 - 3.2.1.21 0.0 1419.0
BYD3_k127_898679_1 Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 570.0
BYD3_k127_898679_2 Alpha-L-fucosidase K01206 - 3.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000571 548.0
BYD3_k127_898679_3 Aldo/keto reductase family K00002 - 1.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004105 455.0
BYD3_k127_898679_4 Belongs to the RbsD FucU family K02431 - 5.1.3.29 0.0000000000000000000000000000000000000000000000000000000001733 205.0
BYD3_k127_898679_5 Belongs to the glycosyl hydrolase 43 family - - - 0.00000000000001424 73.0
BYD3_k127_898679_6 Pfam F5 8 type C domain K01206 - 3.2.1.51 0.00001771 48.0
BYD3_k127_9009386_0 TIGRFAM Acidobacterial duplicated orphan permease K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006263 600.0
BYD3_k127_9009386_1 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006102 499.0
BYD3_k127_9009386_2 ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006936 301.0
BYD3_k127_9009386_3 Belongs to the MIP aquaporin (TC 1.A.8) family K02440 - - 0.00000000000000000000001037 100.0
BYD3_k127_9009386_4 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.00000000005801 67.0
BYD3_k127_9014337_0 FAD dependent oxidoreductase - - - 2.126e-202 642.0
BYD3_k127_9014337_1 lactoylglutathione lyase activity K15975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 414.0
BYD3_k127_9014337_10 Domain of unknown function (DUF1987) - - - 0.00000000004978 68.0
BYD3_k127_9014337_2 Subtilase family K01342,K08651 - 3.4.21.62,3.4.21.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005029 359.0
BYD3_k127_9014337_3 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002356 281.0
BYD3_k127_9014337_4 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002657 261.0
BYD3_k127_9014337_5 palmitoyl-(protein) hydrolase activity K06999,K15975 - - 0.000000000000000000000000000000000000000000000000000000000000000000006403 239.0
BYD3_k127_9014337_6 NUDIX hydrolase - - - 0.000000000000000000000000000000000000000000000000000003656 195.0
BYD3_k127_9014337_7 Pfam Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000006424 162.0
BYD3_k127_9014337_8 Permease, YjgP YjgQ family K07091 - - 0.000000000000000000001167 96.0
BYD3_k127_9055995_0 His Kinase A (phosphoacceptor) domain - - - 1.737e-243 790.0
BYD3_k127_9055995_1 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010,K02017,K10112,K11072 - 3.6.3.29,3.6.3.30,3.6.3.31 3.692e-215 676.0
BYD3_k127_9055995_10 SnoaL-like domain - - - 0.00006128 52.0
BYD3_k127_9055995_2 Bacterial extracellular solute-binding protein K11069 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 546.0
BYD3_k127_9055995_3 ABC transporter, permease protein K11070 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 389.0
BYD3_k127_9055995_4 Psort location CytoplasmicMembrane, score 10.00 K11071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006552 384.0
BYD3_k127_9055995_5 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 307.0
BYD3_k127_9055995_6 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000003177 162.0
BYD3_k127_9055995_7 TfoX N-terminal domain - - - 0.0000000000000000000000000000000000001092 144.0
BYD3_k127_9055995_8 SnoaL-like domain - - - 0.0000000000000000000000000000000003381 136.0
BYD3_k127_9055995_9 Trehalose utilisation K09992 - - 0.000000008755 60.0
BYD3_k127_9068785_0 OstA-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 417.0
BYD3_k127_9068785_1 peptidylprolyl isomerase K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007017 359.0
BYD3_k127_9068785_2 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000008089 191.0
BYD3_k127_9068785_3 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.00000000000000000000000000000000000000000000000000008649 195.0
BYD3_k127_9068785_4 Protein of unknown function (DUF2795) - - - 0.00000000000000000000000000000000000000004757 151.0
BYD3_k127_9068785_5 Psort location OuterMembrane, score - - - 0.000000000000005747 79.0
BYD3_k127_9078518_0 Surface antigen variable number repeat K07277 - - 1.155e-253 809.0
BYD3_k127_9078518_1 TonB-dependent receptor - - - 4.131e-200 663.0
BYD3_k127_9078518_2 Asp/Glu/Hydantoin racemase K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 314.0
BYD3_k127_9078518_3 membrane K06142 - - 0.00000000000000000000000000000000000000000000000000000000009171 209.0
BYD3_k127_9078518_4 Sigma factor regulatory protein, FecR PupR family - - - 0.000000000000000000000000000000000000000000048 175.0
BYD3_k127_9078518_5 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.0000000000000000000000000000000001616 134.0
BYD3_k127_9078518_6 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000001296 119.0
BYD3_k127_9078518_7 Outer membrane protein (OmpH-like) K06142 - - 0.0000000000000000000000007776 110.0
BYD3_k127_9082587_0 histidine kinase HAMP region domain protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008601 614.0
BYD3_k127_9082587_1 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 469.0
BYD3_k127_9082587_2 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 334.0
BYD3_k127_9082587_3 histidine kinase HAMP region domain protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 299.0
BYD3_k127_9082587_4 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001488 249.0
BYD3_k127_9082587_5 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000005227 222.0
BYD3_k127_9082587_6 PFAM MCP methyltransferase, CheR-type K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000005741 190.0
BYD3_k127_9082587_7 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000001526 171.0
BYD3_k127_9082587_8 histidine kinase DNA gyrase B - - - 0.0000000000000000000000000000000000000000005218 167.0
BYD3_k127_9082587_9 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000000000000039 136.0
BYD3_k127_9086460_0 bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 3.711e-213 673.0
BYD3_k127_9086460_1 Cell shape determining protein, MreB Mrl family K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 365.0
BYD3_k127_9086460_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008064 357.0
BYD3_k127_9086460_3 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000203 82.0
BYD3_k127_9088414_0 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 2.617e-221 700.0
BYD3_k127_9088414_1 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005891 321.0
BYD3_k127_9088414_2 Transporter associated domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 290.0
BYD3_k127_922326_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 526.0
BYD3_k127_922326_1 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004555 382.0
BYD3_k127_922326_2 Domain of unknown function (DUF1772) - - - 0.000000000000000000000000000007541 125.0
BYD3_k127_922326_3 - - - - 0.00000009129 55.0
BYD3_k127_929306_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1190.0
BYD3_k127_929306_1 Ribosomal protein S1-like RNA-binding domain K02945 - - 7.458e-317 980.0
BYD3_k127_929306_10 - - - - 0.000000000000000000000000000000000000000000000005076 178.0
BYD3_k127_929306_11 nicotinamide mononucleotide transporter K03811 - - 0.000000000000000000000000000000000000000000001141 172.0
BYD3_k127_929306_12 STAS domain - - - 0.00000000000000000000000000000000000000000002068 166.0
BYD3_k127_929306_13 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000004183 97.0
BYD3_k127_929306_14 STAS domain K04749 - - 0.000000000000000000007719 95.0
BYD3_k127_929306_15 Histidine kinase - - - 0.000000000000000009566 87.0
BYD3_k127_929306_2 ABC-2 type transporter - - - 5.939e-303 959.0
BYD3_k127_929306_3 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 1.602e-255 796.0
BYD3_k127_929306_4 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 562.0
BYD3_k127_929306_5 UDP binding domain K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007307 425.0
BYD3_k127_929306_6 Belongs to the methyltransferase superfamily K07444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005796 358.0
BYD3_k127_929306_7 Beta-lactamase superfamily domain K00784 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 3.1.26.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004733 309.0
BYD3_k127_929306_8 Domain of unknown function (DUF1987) - - - 0.00000000000000000000000000000000000000000000000000001234 191.0
BYD3_k127_929306_9 AAA domain - - - 0.0000000000000000000000000000000000000000000000000002532 189.0
BYD3_k127_946806_0 PFAM X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 1.005e-227 720.0
BYD3_k127_946806_1 Trehalose-phosphatase K16055 - 2.4.1.15,3.1.3.12 7.627e-226 722.0
BYD3_k127_946806_2 PFAM TonB-dependent Receptor Plug - - - 5.8e-206 666.0
BYD3_k127_946806_3 Mechanosensitive ion channel K22044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 364.0
BYD3_k127_946806_4 Response regulator of the LytR AlgR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 304.0
BYD3_k127_946806_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000001146 227.0
BYD3_k127_946806_6 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000028 204.0
BYD3_k127_955280_0 Outer membrane lipoprotein - - - 8.81e-218 707.0
BYD3_k127_955280_1 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 485.0
BYD3_k127_955280_10 RNA polymerase sigma-70 factor K03088 - - 0.000000000000000000000000000000000000000002564 161.0
BYD3_k127_955280_11 PFAM FecR protein - - - 0.00000000000000000000000000000003958 138.0
BYD3_k127_955280_12 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. - - - 0.00000000000000000000000008366 111.0
BYD3_k127_955280_13 Domain of unknown function (DUF5063) - - - 0.00000000000000003274 89.0
BYD3_k127_955280_2 CarboxypepD_reg-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 321.0
BYD3_k127_955280_3 ATPases associated with a variety of cellular activities K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 297.0
BYD3_k127_955280_4 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008092 268.0
BYD3_k127_955280_5 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000232 242.0
BYD3_k127_955280_6 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000003745 231.0
BYD3_k127_955280_7 Protein involved in cellulose biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000004762 216.0
BYD3_k127_955280_8 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000001553 207.0
BYD3_k127_955280_9 3'-5' exonuclease - - - 0.00000000000000000000000000000000000000000000000001737 187.0
BYD3_k127_979641_0 epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 468.0
BYD3_k127_979641_1 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00978 - 2.7.7.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 449.0
BYD3_k127_979641_2 C-methyltransferase C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003127 400.0
BYD3_k127_979641_3 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000449 301.0
BYD3_k127_979641_4 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000000001595 233.0
BYD3_k127_979641_5 Methyltransferase domain - - - 0.00000000000000000000000000000005172 131.0
BYD3_k127_979641_6 Protein of unknown function (DUF418) K07148 - - 0.0000000000000000000000000003431 123.0
BYD3_k127_981147_0 DNA polymerase alpha chain like domain K02337 - 2.7.7.7 0.0 1473.0
BYD3_k127_981147_1 Tellurite resistance protein TerB K21397 - - 0.0 1216.0
BYD3_k127_981147_10 Divergent AAA domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000001613 222.0
BYD3_k127_981147_11 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000001205 186.0
BYD3_k127_981147_12 Domain of unknown function (DUF1987) - - - 0.000000000000000000000000000000000000000000000003892 174.0
BYD3_k127_981147_13 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000002637 171.0
BYD3_k127_981147_14 - - - - 0.000000000000000000000007722 113.0
BYD3_k127_981147_15 - - - - 0.0000000000000000000008291 102.0
BYD3_k127_981147_16 Tetratricopeptide repeat - - - 0.00000000000000002465 96.0
BYD3_k127_981147_17 - - - - 0.000000000005162 72.0
BYD3_k127_981147_2 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 0.0 1052.0
BYD3_k127_981147_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 556.0
BYD3_k127_981147_4 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007817 514.0
BYD3_k127_981147_5 Succinate dehydrogenase Fumarate reductase K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 379.0
BYD3_k127_981147_6 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 379.0
BYD3_k127_981147_7 Lamin Tail Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 338.0
BYD3_k127_981147_8 PFAM Integral membrane protein TerC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 295.0
BYD3_k127_981147_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002131 277.0
BYD3_k127_990130_0 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 2.971e-258 818.0
BYD3_k127_990130_1 Surface antigen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 442.0
BYD3_k127_990130_2 Psort location OuterMembrane, score K06076 - - 0.00000000000000000000000000000000000000000000006881 184.0
BYD3_k127_990130_3 RNA-binding protein - - - 0.0000000000000000000000000002461 117.0
BYD3_k127_990130_4 HAD hydrolase, family IA, variant K01091 - 3.1.3.18 0.0000000000003683 70.0
BYD3_k127_990381_0 Protein of unknown function (DUF2723) - - - 0.0 1143.0
BYD3_k127_990381_1 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.948e-275 859.0
BYD3_k127_990381_10 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000008986 225.0
BYD3_k127_990381_11 -O-antigen K16705 - - 0.000000000000000000000000000000000000000000000000000000000007611 228.0
BYD3_k127_990381_12 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000003805 181.0
BYD3_k127_990381_13 Caspase domain - - - 0.00000000000000000000003798 116.0
BYD3_k127_990381_2 Glycosyl hydrolase family 20, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 524.0
BYD3_k127_990381_3 Ribosomal protein S2 K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 367.0
BYD3_k127_990381_4 Domain of unknown function (DUF5009) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 352.0
BYD3_k127_990381_5 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 345.0
BYD3_k127_990381_6 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007295 319.0
BYD3_k127_990381_7 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000000001493 232.0
BYD3_k127_990381_8 Ribosome recycling factor K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000002361 228.0
BYD3_k127_990381_9 OmpA family K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000003401 235.0
BYD3_k127_991018_0 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009297 563.0
BYD3_k127_991018_1 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 364.0
BYD3_k127_991018_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004348 249.0
BYD3_k127_991018_3 Peptidase C26 K07010 - - 0.00000000000000000000000000000000000000001221 162.0
BYD3_k127_991018_4 Psort location Extracellular, score - - - 0.000000000000000000000000000000001844 133.0
BYD3_k127_991018_5 - - - - 0.000000000001289 67.0
BYD3_k127_991018_6 - - - - 0.0000000002902 61.0
BYD3_k127_991018_7 - - - - 0.000001771 49.0
BYD3_k127_993629_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1221.0
BYD3_k127_993629_1 COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation - - - 6.693e-206 685.0
BYD3_k127_993629_10 domain protein K13735,K19360 - - 0.00000000000000000000000000000000000004708 165.0
BYD3_k127_993629_11 COG NOG32209 non supervised orthologous group - - - 0.000000000000000000000000143 110.0
BYD3_k127_993629_12 Protein of unknown function (DUF1573) - - - 0.0000000000000000000000009873 109.0
BYD3_k127_993629_2 Aminotransferase class I and II K00812,K14260 - 2.6.1.1,2.6.1.2,2.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009699 526.0
BYD3_k127_993629_3 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004684 389.0
BYD3_k127_993629_4 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 325.0
BYD3_k127_993629_5 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000004923 231.0
BYD3_k127_993629_6 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.00000000000000000000000000000000000000000000000000000000000000000707 236.0
BYD3_k127_993629_7 ribonuclease BN K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000004511 233.0
BYD3_k127_993629_8 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000005398 213.0
BYD3_k127_993629_9 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000000000003099 177.0