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Overview

ID MAG00391
Name CMS1_bin.86
Sample SMP0010
Taxonomy
Kingdom Bacteria
Phylum Verrucomicrobiota
Class Verrucomicrobiia
Order Opitutales
Family Oceanipulchritudinaceae
Genus Verruco-01
Species
Assembly information
Completeness (%) 90.47
Contamination (%) 2.81
GC content (%) 54.0
N50 (bp) 8,763
Genome size (bp) 2,730,808

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2313

Gene name Description KEGG GOs EC E-value Score Sequence
CMS1_k127_103999_0 Putative esterase - - - 0.0000000000000000000000000000000000000000000000000000002315 199.0
CMS1_k127_103999_1 Sigma-70, region 4 K03088 - - 0.000000000000000000000000239 115.0
CMS1_k127_103999_2 - - - - 0.00000003009 63.0
CMS1_k127_103999_3 - - - - 0.0000003184 62.0
CMS1_k127_1040742_0 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 2.662e-320 996.0
CMS1_k127_1040742_1 General secretory system II protein E domain protein K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 561.0
CMS1_k127_1040742_2 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 536.0
CMS1_k127_1040742_3 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003109 362.0
CMS1_k127_1040742_4 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 331.0
CMS1_k127_1040742_5 Protein of unknown function (DUF1349) K09702 - - 0.000000000000000000000000000000000000000000000000000000729 200.0
CMS1_k127_1040742_6 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000003642 199.0
CMS1_k127_1040742_7 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000005371 157.0
CMS1_k127_1040742_8 Protein of unknown function (DUF1634) - - - 0.000000000000000000000000008103 120.0
CMS1_k127_1046790_0 Putative Na+/H+ antiporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 356.0
CMS1_k127_1046790_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006342 314.0
CMS1_k127_1046790_2 PFAM chemotaxis sensory transducer K03406 - - 0.000000000000000000000000000000000000000000000000003021 195.0
CMS1_k127_1061207_0 AcrB/AcrD/AcrF family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 442.0
CMS1_k127_1061207_1 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000003076 181.0
CMS1_k127_1061207_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000007756 140.0
CMS1_k127_1061207_3 Protein of unknown function (DUF2892) - - - 0.000000000000000009766 86.0
CMS1_k127_107875_0 MFS/sugar transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005056 559.0
CMS1_k127_107875_1 TIGRFAM phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 511.0
CMS1_k127_107875_2 Aminoacyl tRNA synthetase class II, N-terminal domain K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 484.0
CMS1_k127_107875_3 Belongs to the class-I aminoacyl-tRNA synthetase family K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007835 301.0
CMS1_k127_107875_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009363 285.0
CMS1_k127_107875_5 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067,K06192 - - 0.00000000000000000000000000000000000199 146.0
CMS1_k127_107875_6 COG1512 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.0000000000000000000000000000000427 135.0
CMS1_k127_107875_7 nucleotidyltransferase activity - - - 0.0000000000000000000000000445 117.0
CMS1_k127_107875_8 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.00000000000000000000000004454 119.0
CMS1_k127_107875_9 Tetratricopeptide repeat - - - 0.000000000008055 71.0
CMS1_k127_1086693_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 519.0
CMS1_k127_1086693_1 Carbohydrate esterase, sialic acid-specific acetylesterase K05970 - 3.1.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003923 469.0
CMS1_k127_1086693_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 353.0
CMS1_k127_1086693_3 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 336.0
CMS1_k127_1086693_4 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004425 287.0
CMS1_k127_1086693_5 Flavoprotein K01598 - 4.1.1.36 0.0000000000000000000000000000000000000000000000000000000000000001304 226.0
CMS1_k127_1086693_6 HAD-hyrolase-like K01838 - 5.4.2.6 0.000000000000000000000000000000000000000000000000000006225 197.0
CMS1_k127_1086693_7 LemA family K03744 - - 0.000000000000000000000000000000000000000000002318 171.0
CMS1_k127_1089828_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005102 453.0
CMS1_k127_1089828_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004487 263.0
CMS1_k127_1089828_2 Phage shock protein A K03969 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000004869 70.0
CMS1_k127_1131418_0 Phage P2 GpU K06906 - - 0.000000000000000000000001715 109.0
CMS1_k127_1131418_1 nuclear chromosome segregation - - - 0.0000000000000000000000128 115.0
CMS1_k127_1131418_2 tail protein x - - - 0.000000008955 68.0
CMS1_k127_1166087_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 3.006e-195 628.0
CMS1_k127_1166087_1 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002136 286.0
CMS1_k127_1187452_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009166 402.0
CMS1_k127_1187452_1 Belongs to the glycerate kinase type-1 family K00865 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 300.0
CMS1_k127_1187452_2 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 GO:0000175,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0034641,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000001338 217.0
CMS1_k127_1187452_3 BadF/BadG/BcrA/BcrD ATPase family - - - 0.000000000000000000000000000000000000000000000000008962 193.0
CMS1_k127_1187452_4 O-Antigen ligase - - - 0.00000000000000000000000000000000000000000000001625 189.0
CMS1_k127_1187452_5 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000347 149.0
CMS1_k127_1187452_6 Protein of unknown function (DUF1318) K09978 - - 0.00000000000000000000009101 102.0
CMS1_k127_1187452_7 Acylphosphatase - - - 0.00000000000000000003176 94.0
CMS1_k127_1187452_8 - - - - 0.00008191 48.0
CMS1_k127_1191253_0 HipA N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 589.0
CMS1_k127_1191253_1 Belongs to the glycosyl hydrolase 43 family - - - 0.000000000000000000001253 103.0
CMS1_k127_1191253_2 pathogenesis - - - 0.00001081 55.0
CMS1_k127_1191286_0 Hydroxyethylthiazole kinase family K00878 - 2.7.1.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005474 328.0
CMS1_k127_1191286_1 Thiamine monophosphate synthase K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000000008604 213.0
CMS1_k127_1191286_2 Tetrapyrrole (Corrin/Porphyrin) Methylases - - - 0.00000000000000000000000000000000000000000000000008087 188.0
CMS1_k127_1191286_3 signal-transduction protein containing cAMP-binding and CBS K07182 - - 0.000000000000000000000000000000000000000001447 169.0
CMS1_k127_1191286_4 Belongs to the glycosyl hydrolase 43 family - - - 0.000000000000000000000007041 104.0
CMS1_k127_1240041_0 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 1.473e-202 636.0
CMS1_k127_1240041_1 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 593.0
CMS1_k127_1240041_2 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003578 353.0
CMS1_k127_1240041_3 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 336.0
CMS1_k127_1240041_4 YibE/F-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006704 331.0
CMS1_k127_1240041_5 RND efflux system, outer membrane lipoprotein K18139,K18147,K18323 - - 0.0000000000000000000000000000000000000000000000000000000000000000896 228.0
CMS1_k127_1258238_0 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000008414 254.0
CMS1_k127_1258238_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000189 229.0
CMS1_k127_1258238_2 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000269 216.0
CMS1_k127_1258238_3 - - - - 0.00000000000000000000000000000000000000000000001749 176.0
CMS1_k127_1277006_0 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006458 338.0
CMS1_k127_1277006_1 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003526 297.0
CMS1_k127_1277006_2 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000004497 171.0
CMS1_k127_1277006_3 Hexapeptide repeat of succinyl-transferase K00640 - 2.3.1.30 0.00000000000000000000000000001159 125.0
CMS1_k127_1277006_4 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K02660,K03406 - - 0.0000000000000000000022 99.0
CMS1_k127_1277006_5 Glycosyltransferase Family 4 - - - 0.0008692 46.0
CMS1_k127_1283893_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000528 585.0
CMS1_k127_1283893_1 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000005234 194.0
CMS1_k127_1283893_2 cytochrome c - GO:0005575,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0017004,GO:0022607,GO:0031224,GO:0034622,GO:0043933,GO:0044085,GO:0044425,GO:0065003,GO:0071840 - 0.0000000000000000000000000000000000000000000003782 186.0
CMS1_k127_1289508_0 NAD synthase - - - 8.153e-217 685.0
CMS1_k127_1289508_1 Aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 577.0
CMS1_k127_1289508_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000301 96.0
CMS1_k127_1289508_3 Putative transposase of IS4/5 family (DUF4096) - - - 0.0000000000001477 76.0
CMS1_k127_1302425_0 Beta-ketoacyl synthase, N-terminal domain K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 539.0
CMS1_k127_1302425_1 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 412.0
CMS1_k127_1302425_2 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003704 323.0
CMS1_k127_1302425_3 EamA-like transporter family - - - 0.000000000000000000000000000000000000000002124 169.0
CMS1_k127_1302425_4 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.00000000000000000000000000000000001487 139.0
CMS1_k127_1302425_5 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000002502 98.0
CMS1_k127_1302425_6 Protein of unknown function, DUF481 - - - 0.0000000000000001623 92.0
CMS1_k127_1302425_7 Protein of unknown function (DUF3016) - - - 0.000000000000003115 83.0
CMS1_k127_1332669_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 430.0
CMS1_k127_1332669_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003778 374.0
CMS1_k127_1332669_2 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001265 278.0
CMS1_k127_1332669_3 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000000202 211.0
CMS1_k127_1332669_4 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000007397 207.0
CMS1_k127_1332669_5 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000002109 197.0
CMS1_k127_1332669_6 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000000000000000000006543 134.0
CMS1_k127_1332669_7 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000002969 114.0
CMS1_k127_1332669_8 signal peptide peptidase K04773 - - 0.00000000000000000000000003671 113.0
CMS1_k127_1332669_9 - - - - 0.00000000000000000007823 91.0
CMS1_k127_1336093_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 369.0
CMS1_k127_1336093_1 Regulatory protein GntR HTH - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 341.0
CMS1_k127_1336093_2 Related to nicotinamidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001269 257.0
CMS1_k127_1336093_3 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652,K03852 - 2.2.1.6,2.3.3.15 0.000000000000000000000000000000000000000000000000000000000000000000009133 235.0
CMS1_k127_1349182_0 Belongs to the glycosyl hydrolase 43 family - - - 5.435e-256 797.0
CMS1_k127_1349182_1 Belongs to the glycosyl hydrolase 43 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005722 632.0
CMS1_k127_1349182_2 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003103 474.0
CMS1_k127_1349182_3 endo-1,4-beta-xylanase activity K01181,K01198,K01209 - 3.2.1.37,3.2.1.55,3.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 413.0
CMS1_k127_1349182_4 Glycosyl hydrolases family 39 K01198 - 3.2.1.37 0.0000000000000000000000000000000000000000000006848 167.0
CMS1_k127_1349182_5 DNA-templated transcription, initiation K02405 - - 0.00000000000000000000000000000000000000003443 158.0
CMS1_k127_1349182_6 Thioesterase superfamily K01075,K07107 - 3.1.2.23 0.00000000000000359 81.0
CMS1_k127_1354237_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 GO:0003674,GO:0003824,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016491,GO:0016625,GO:0016903,GO:0043873,GO:0050896,GO:0055114 1.2.7.1 0.0 1258.0
CMS1_k127_1354237_1 Uncharacterized protein family (UPF0051) K09014 - - 6.481e-236 737.0
CMS1_k127_1354237_10 - - - - 0.000000000000000000000000000000000000000000006025 173.0
CMS1_k127_1354237_11 Ferric uptake regulator family K09825 - - 0.000000000000000000000000000000001597 134.0
CMS1_k127_1354237_2 Glutamate synthase, NADH NADPH, small subunit K00266 - 1.4.1.13,1.4.1.14 2.752e-217 687.0
CMS1_k127_1354237_3 Belongs to the glycosyl hydrolase 43 family K01198,K01209 - 3.2.1.37,3.2.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 566.0
CMS1_k127_1354237_4 ATPases associated with a variety of cellular activities K09013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 385.0
CMS1_k127_1354237_5 FeS assembly protein SufD K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008247 361.0
CMS1_k127_1354237_6 MFS/sugar transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001763 286.0
CMS1_k127_1354237_7 Belongs to the glycosyl hydrolase 8 (cellulase D) family K15531 - 3.2.1.156 0.0000000000000000000000000000000000000000000000000000000000000000005726 258.0
CMS1_k127_1354237_8 Protein of unknown function (DUF4254) - - - 0.00000000000000000000000000000000000000000000000000000000006532 210.0
CMS1_k127_1354237_9 COGs COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein - - - 0.000000000000000000000000000000000000000000000000005544 198.0
CMS1_k127_1355291_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007923 518.0
CMS1_k127_1355291_1 Polysaccharide biosynthesis protein K01710,K15894,K15912,K19421 GO:0008150,GO:0043900,GO:0043902,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0065007,GO:1900190,GO:1900192 4.2.1.115,4.2.1.135,4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008708 472.0
CMS1_k127_1355291_10 Putative zinc ribbon domain - - - 0.00000000000000000000000007778 111.0
CMS1_k127_1355291_11 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000003556 107.0
CMS1_k127_1355291_12 - - - - 0.00000000000000000004172 106.0
CMS1_k127_1355291_13 nitronate monooxygenase activity K00459 - 1.13.12.16 0.000000000000000001034 89.0
CMS1_k127_1355291_14 Belongs to the bacterial ribosomal protein bS18 family K02963 - - 0.0000000000000002256 81.0
CMS1_k127_1355291_15 NAD(P)H dehydrogenase (quinone) activity K03809 - 1.6.5.2 0.000000001022 61.0
CMS1_k127_1355291_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 388.0
CMS1_k127_1355291_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 335.0
CMS1_k127_1355291_4 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964 329.0
CMS1_k127_1355291_5 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000002449 168.0
CMS1_k127_1355291_6 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000004093 164.0
CMS1_k127_1355291_7 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000001827 158.0
CMS1_k127_1355291_8 Domain of unknown function (DUF374) K09778 - - 0.0000000000000000000000000000000000006924 148.0
CMS1_k127_1355291_9 Phosphatidylglycerophosphatase A K01095 - 3.1.3.27 0.000000000000000000000000000000003439 135.0
CMS1_k127_135822_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 387.0
CMS1_k127_135822_1 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 346.0
CMS1_k127_135822_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000112 249.0
CMS1_k127_135822_3 phytanoyl-CoA dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000005773 225.0
CMS1_k127_135822_4 Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000005761 219.0
CMS1_k127_135822_6 Putative oxidoreductase C terminal - - - 0.000000000000000000000001596 115.0
CMS1_k127_1359523_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 292.0
CMS1_k127_1359523_1 Voltage gated chloride channel K03281 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002243 264.0
CMS1_k127_1359523_2 Domain of unknown function (DUF1732) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000378 248.0
CMS1_k127_1359523_3 general secretion pathway protein K02455 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0016020,GO:0032940,GO:0033036,GO:0042886,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098776 - 0.00000000000000000000000000000004343 138.0
CMS1_k127_1410991_0 Flavin containing amine oxidoreductase - - - 7.043e-216 680.0
CMS1_k127_1410991_1 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000003304 218.0
CMS1_k127_1410991_2 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000000000002845 202.0
CMS1_k127_1410991_3 biopolymer transport protein - - - 0.00001261 54.0
CMS1_k127_1468749_0 Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005751 424.0
CMS1_k127_1468749_1 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 357.0
CMS1_k127_1468749_2 family 9 K02849 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008573 270.0
CMS1_k127_1468749_3 Peptidase family M3 K01414 - 3.4.24.70 0.00000000000000000000000000001211 122.0
CMS1_k127_1468749_4 Glycosyltransferase family 9 (heptosyltransferase) K02517 - 2.3.1.241 0.0000000000000009257 90.0
CMS1_k127_1484542_0 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000004644 114.0
CMS1_k127_1484542_1 HDOD domain - - - 0.0000000000000001109 93.0
CMS1_k127_1484542_2 Von Willebrand factor type A domain K07114 - - 0.00000003955 58.0
CMS1_k127_1496688_0 histidine kinase A domain protein domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007594 305.0
CMS1_k127_1496688_1 Restriction endonuclease K07448 - - 0.00000000000000000000000000000000000000000000000000000000007627 209.0
CMS1_k127_1496688_2 response regulator - - - 0.00000000000000000000000001941 117.0
CMS1_k127_1520759_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005969 346.0
CMS1_k127_1520759_1 Amidohydrolase - - - 0.0000000000000000000000000316 117.0
CMS1_k127_1542146_0 Glycosyl hydrolase 36 superfamily, catalytic domain K00702,K13688 - 2.4.1.20 0.0 1169.0
CMS1_k127_1542146_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 448.0
CMS1_k127_1542146_2 AAA ATPase K03581 - 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009556 386.0
CMS1_k127_1542146_3 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006616 374.0
CMS1_k127_1542146_4 Prokaryotic N-terminal methylation motif - - - 0.0000000000000000000000000000000003058 141.0
CMS1_k127_1542146_5 Dihydrofolate reductase K00287 - 1.5.1.3 0.00000000000000000000000000002413 124.0
CMS1_k127_1542146_6 - - - - 0.000000000006612 71.0
CMS1_k127_1550596_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 611.0
CMS1_k127_1550596_1 Prokaryotic dksA/traR C4-type zinc finger - - - 0.00000000000000000000000000001073 130.0
CMS1_k127_157018_0 NUDIX domain - - - 0.00000000000000000000000000000000000001379 152.0
CMS1_k127_157018_1 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000000007511 120.0
CMS1_k127_157018_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000004289 111.0
CMS1_k127_157018_3 UTP--glucose-1-phosphate uridylyltransferase K00972,K12447 - 2.7.7.23,2.7.7.64,2.7.7.83 0.0000003775 54.0
CMS1_k127_1570950_0 beta-N-acetylhexosaminidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 364.0
CMS1_k127_1570950_1 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000611 286.0
CMS1_k127_1570950_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000004478 174.0
CMS1_k127_1575550_0 Ribonucleotide reductase, all-alpha domain - - - 0.0 1281.0
CMS1_k127_1575550_1 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 410.0
CMS1_k127_1575550_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000001332 201.0
CMS1_k127_1596198_0 acetolactate synthase large subunit K01652 - 2.2.1.6 4.28e-239 752.0
CMS1_k127_1596198_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005087 470.0
CMS1_k127_1596198_11 Glycosyl hydrolase family 1 K05350 - 3.2.1.21 0.0001548 46.0
CMS1_k127_1596198_12 HEAT repeat - - - 0.0006635 52.0
CMS1_k127_1596198_2 ThiF family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003988 276.0
CMS1_k127_1596198_3 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000002205 193.0
CMS1_k127_1596198_4 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000009145 192.0
CMS1_k127_1596198_5 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000001084 189.0
CMS1_k127_1596198_6 peptidylprolyl isomerase, FKBP-type K03772 - 5.2.1.8 0.00000000000000000000000002878 121.0
CMS1_k127_1596198_7 - - - - 0.0000000000000000000001036 102.0
CMS1_k127_1596198_8 energy transducer activity K03646,K03832 - - 0.000000000001588 73.0
CMS1_k127_1596198_9 Gram-negative bacterial TonB protein C-terminal - - - 0.000000005351 64.0
CMS1_k127_1622522_0 Na+-transporting oxaloacetate decarboxylase beta subunit K01572 - 4.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 489.0
CMS1_k127_1622522_1 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000000000000001286 207.0
CMS1_k127_1622522_2 Biopolymer transportern ExbD K03559 - - 0.000000000000000000000000000002722 124.0
CMS1_k127_1622522_3 Biopolymer transport protein ExbD/TolR K03559 - - 0.0000000000004753 72.0
CMS1_k127_1634994_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005244 303.0
CMS1_k127_1634994_1 Binding-protein-dependent transport system inner membrane component K15582 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 300.0
CMS1_k127_1634994_2 Belongs to the ABC transporter superfamily - - - 0.00000000000000000000000000000000000000000000000001282 185.0
CMS1_k127_1634994_3 Response regulator receiver - - - 0.0000000000000004766 84.0
CMS1_k127_1634995_0 Maleate cis-trans isomerase K01799 - 5.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000004125 228.0
CMS1_k127_1634995_1 carboxylic ester hydrolase activity K01055 - 3.1.1.24 0.000000000000000000000000000000000000000000000000000000006075 203.0
CMS1_k127_1634995_2 coenzyme F390 synthetase - - - 0.000000000000000000000000000000000000000000002831 166.0
CMS1_k127_1641187_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 9.491e-212 668.0
CMS1_k127_1641187_1 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006343 333.0
CMS1_k127_1644419_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008517 559.0
CMS1_k127_1644419_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 361.0
CMS1_k127_1644419_10 Protein of unknown function (DUF456) K09793 - - 0.00000000000000166 83.0
CMS1_k127_1644419_11 Regulatory protein, FmdB family - - - 0.0000000000000844 74.0
CMS1_k127_1644419_12 Domain of unknown function (DUF4405) - - - 0.0005002 48.0
CMS1_k127_1644419_2 Sugar (and other) transporter K07552 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 332.0
CMS1_k127_1644419_3 PFAM ThiJ PfpI domain-containing protein K03152,K05520 - 3.5.1.124 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 287.0
CMS1_k127_1644419_4 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000000000000000000000000002048 238.0
CMS1_k127_1644419_5 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.000000000000000000000000000000000000000000000001382 179.0
CMS1_k127_1644419_6 MerR, DNA binding K19591 - - 0.00000000000000000000000000000000000000001582 160.0
CMS1_k127_1644419_7 - - - - 0.000000000000000000000000239 111.0
CMS1_k127_1644419_8 Glycosyl transferase, group K20444 - - 0.0000000000000000000000004902 118.0
CMS1_k127_1650258_0 Thioesterase domain - - - 0.0 1263.0
CMS1_k127_1650258_1 Condensation domain - - - 1.467e-239 811.0
CMS1_k127_1650258_2 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 323.0
CMS1_k127_1650258_3 PFAM extracellular solute-binding protein family 1 K11069 - - 0.00000000000000000000000000000000002134 150.0
CMS1_k127_1650258_4 Cyclic peptide transporter K06159,K06160 - - 0.000000000000000000003207 100.0
CMS1_k127_1651409_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1031.0
CMS1_k127_1651409_1 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000000000000000000000000002063 240.0
CMS1_k127_1651409_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.00000000000000000000000002465 108.0
CMS1_k127_165615_0 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008227 454.0
CMS1_k127_165615_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000002924 193.0
CMS1_k127_1697257_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007691 619.0
CMS1_k127_1697257_1 RadC-like JAB domain K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004808 284.0
CMS1_k127_1697257_10 FlgN protein - - - 0.00000000002552 71.0
CMS1_k127_1697257_2 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000003064 233.0
CMS1_k127_1697257_3 NAD(P)H-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000006243 230.0
CMS1_k127_1697257_4 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000000000000002566 145.0
CMS1_k127_1697257_5 - - - - 0.0000000000000000000000000000000000006571 152.0
CMS1_k127_1697257_6 Belongs to the peptidase S14 family - - - 0.0000000000000000000000000000000002371 145.0
CMS1_k127_1697257_7 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000002674 138.0
CMS1_k127_1697257_8 Flagellar basal body rod FlgEFG protein C-terminal K02396 - - 0.000000000000000004397 97.0
CMS1_k127_1697257_9 epimerase K00091,K01007,K02377,K07118,K19073,K19267 - 1.1.1.219,1.1.1.271,1.3.1.75,1.6.5.2,2.7.9.2 0.000000000004079 75.0
CMS1_k127_1739545_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009421 594.0
CMS1_k127_1739545_1 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000001509 136.0
CMS1_k127_1739545_2 Chemotaxis phosphatase CheX K03409 - - 0.0002588 50.0
CMS1_k127_1739669_0 Belongs to the glycosyl hydrolase 2 family K01190 - 3.2.1.23 5.296e-261 824.0
CMS1_k127_1739669_1 Catalase K03781 - 1.11.1.6 1.673e-254 791.0
CMS1_k127_1739669_2 Bacterial regulatory protein, Fis family K02584 - - 1.147e-203 647.0
CMS1_k127_1739669_3 MFS/sugar transport protein K03292 - - 1.515e-199 632.0
CMS1_k127_1739669_4 siderophore transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 552.0
CMS1_k127_1739669_5 purine nucleotide biosynthetic process K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003742 470.0
CMS1_k127_1739669_6 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000001968 158.0
CMS1_k127_1739669_7 response to abiotic stimulus K06867 - - 0.000000000000000000000000000000000000001143 154.0
CMS1_k127_1740206_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1534.0
CMS1_k127_1740206_1 Represses a number of genes involved in the response to DNA damage (SOS response) K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000001878 241.0
CMS1_k127_178090_0 PFAM ATP-binding region ATPase domain protein - - - 4.352e-260 820.0
CMS1_k127_178090_1 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 581.0
CMS1_k127_178090_2 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004506 520.0
CMS1_k127_178090_3 helix_turn_helix, Lux Regulon K02479 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 334.0
CMS1_k127_178090_4 PPIC-type PPIASE domain K03770 - 5.2.1.8 0.0000000000000000001811 97.0
CMS1_k127_178090_5 Endonuclease/Exonuclease/phosphatase family - - - 0.00002435 51.0
CMS1_k127_1785572_0 Mur ligase K02558 - 6.3.2.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 542.0
CMS1_k127_1785572_1 Dimerisation domain of Zinc Transporter K13283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 344.0
CMS1_k127_1785572_2 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.000000000000000000000000000000000000000004599 174.0
CMS1_k127_1785572_3 - - - - 0.0000000003092 62.0
CMS1_k127_1794800_0 Belongs to the GPI family K01810 - 5.3.1.9 2.033e-204 650.0
CMS1_k127_1794800_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000001102 265.0
CMS1_k127_1794800_2 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000259 214.0
CMS1_k127_1794800_3 Putative phage abortive infection protein - - - 0.0002551 49.0
CMS1_k127_1804410_0 Domain of unknown function (DUF3516) - - - 3.096e-310 974.0
CMS1_k127_1804410_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004067 482.0
CMS1_k127_1804410_11 bacterial-type flagellum organization K02279,K02386 - - 0.00000002854 64.0
CMS1_k127_1804410_2 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007658 421.0
CMS1_k127_1804410_3 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 334.0
CMS1_k127_1804410_4 Flagella basal body rod protein K02392 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 306.0
CMS1_k127_1804410_5 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000326 273.0
CMS1_k127_1804410_6 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000001565 204.0
CMS1_k127_1804410_7 Flagellar basal body rod FlgEFG protein C-terminal - - - 0.00000000000000000000000000000000000000001184 163.0
CMS1_k127_1804410_8 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.0000000000000000000000000000000001912 139.0
CMS1_k127_1805387_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 332.0
CMS1_k127_1805387_1 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000167 226.0
CMS1_k127_1805387_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K03429 - 2.4.1.315 0.00000000000000000000000000000000006478 139.0
CMS1_k127_1828291_0 AMP-dependent synthetase K05939 - 2.3.1.40,6.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008792 532.0
CMS1_k127_1835475_0 potassium ion transport K03281,K03455,K07085,K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008891 245.0
CMS1_k127_1835475_1 peptidyl-tyrosine sulfation - - - 0.000478 52.0
CMS1_k127_1839051_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 612.0
CMS1_k127_1839051_1 endo-1,4-beta-xylanase activity K01181 - 3.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 520.0
CMS1_k127_1839051_2 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 321.0
CMS1_k127_1839051_3 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000003063 201.0
CMS1_k127_1839051_4 Putative esterase K07017 - - 0.0000000000000000000000000000002369 130.0
CMS1_k127_1858261_0 acetolactate synthase large subunit K01652 - 2.2.1.6 1.418e-249 782.0
CMS1_k127_1858261_1 Helicase associated domain (HA2) Add an annotation K03578 - 3.6.4.13 2.244e-249 788.0
CMS1_k127_1858261_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.191e-233 733.0
CMS1_k127_1858261_3 Domain of unknown function DUF21 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 342.0
CMS1_k127_1858261_4 Glycosyl transferase family 41 - - - 0.00000000000000000000000000000000000000000000000000000000000000000001057 257.0
CMS1_k127_1858261_5 MazG-like family - - - 0.00000000000000000000000000000000000001204 147.0
CMS1_k127_1890647_0 Virulence - - - 0.0000000000000000000000000000000000000000000000000000000000004004 241.0
CMS1_k127_1924661_0 Alpha amylase, catalytic domain K01182,K01187,K05343 - 3.2.1.1,3.2.1.10,3.2.1.20,5.4.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000344 591.0
CMS1_k127_1924661_1 Pseudouridine synthase K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003046 276.0
CMS1_k127_1924661_2 Glycosyl transferases group 1 K13668 - 2.4.1.346 0.0000000000000000000000000000000000000000000000000000000000000000000000000003428 272.0
CMS1_k127_1924661_3 short-chain dehydrogenase K07124 - - 0.00000000000000000000000000000000000000000000000000000000000000000003422 242.0
CMS1_k127_1924661_4 Catalyzes the synthesis of activated sulfate K00860 GO:0003674,GO:0003824,GO:0004020,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237 2.7.1.25 0.000000000000000000000000000000000000000000000000000000000003875 214.0
CMS1_k127_1924661_5 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000004611 130.0
CMS1_k127_1924661_6 PFAM sigma 54 modulation protein ribosomal protein S30EA K05808 - - 0.00000000000000000000000000001092 121.0
CMS1_k127_193159_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007194 493.0
CMS1_k127_193159_1 phosphatase activity K07025,K20860 - 3.1.3.102,3.1.3.104 0.00000000000000000000000000000000003388 142.0
CMS1_k127_193159_2 - - - - 0.00000000000000000000000000001047 137.0
CMS1_k127_193159_3 receptor K02014 - - 0.0000000000009003 78.0
CMS1_k127_1959860_0 Bacterial DNA topoisomeraes I ATP-binding domain K03169 - 5.99.1.2 1.189e-268 852.0
CMS1_k127_1959860_1 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 456.0
CMS1_k127_1959860_10 FR47-like protein - - - 0.000000000000000000000003004 108.0
CMS1_k127_1959860_2 tRNA (Uracil-5-)-methyltransferase K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000364 452.0
CMS1_k127_1959860_3 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007172 441.0
CMS1_k127_1959860_4 Phosphatidylserine decarboxylase K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 297.0
CMS1_k127_1959860_5 PFAM Mg2 transporter protein CorA family protein K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 295.0
CMS1_k127_1959860_6 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000161 267.0
CMS1_k127_1959860_7 Encoded by - - - 0.0000000000000000000000000000000000000000000000005417 193.0
CMS1_k127_1959860_8 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000000000000006369 158.0
CMS1_k127_1959860_9 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000004987 151.0
CMS1_k127_1975810_0 - - - - 2.825e-221 694.0
CMS1_k127_1978846_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 563.0
CMS1_k127_1978846_1 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 554.0
CMS1_k127_1978846_2 Phosphoadenosine phosphosulfate reductase family K00957 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009064 454.0
CMS1_k127_1978846_3 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000117 217.0
CMS1_k127_1978846_4 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000005855 203.0
CMS1_k127_1978846_5 FabA-like domain K02372 - 4.2.1.59 0.00000000000000000000000000000000001744 140.0
CMS1_k127_1978846_6 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000009716 121.0
CMS1_k127_2033326_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.488e-286 890.0
CMS1_k127_2033326_1 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 502.0
CMS1_k127_2033326_10 IA, variant 3 - - - 0.00000000000000000000000000000000000000006287 160.0
CMS1_k127_2033326_11 Belongs to the bacterial ribosomal protein bL31 family K02909 - - 0.000000000000000000000000004075 116.0
CMS1_k127_2033326_12 Alpha-L-arabinofuranosidase C-terminus K01209 - 3.2.1.55 0.0000000000000000000001394 99.0
CMS1_k127_2033326_13 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000005744 96.0
CMS1_k127_2033326_14 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000000000008809 83.0
CMS1_k127_2033326_2 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003516 430.0
CMS1_k127_2033326_3 ATPase-coupled phosphate ion transmembrane transporter activity K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007219 373.0
CMS1_k127_2033326_4 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 323.0
CMS1_k127_2033326_5 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 321.0
CMS1_k127_2033326_6 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003119 307.0
CMS1_k127_2033326_7 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002489 241.0
CMS1_k127_2033326_8 DJ-1/PfpI family - - - 0.00000000000000000000000000000000000000000000000000000000001904 212.0
CMS1_k127_2033326_9 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000003797 175.0
CMS1_k127_2050042_0 HELICc2 K03722 - 3.6.4.12 2.257e-199 642.0
CMS1_k127_2050042_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 615.0
CMS1_k127_2050042_2 Peptidase M48 K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006724 456.0
CMS1_k127_2050042_3 PFAM NAD(P)H dehydrogenase (quinone) K00355 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000001739 258.0
CMS1_k127_2050042_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000004049 212.0
CMS1_k127_2050042_5 - - - - 0.00000000000002183 82.0
CMS1_k127_207766_0 Belongs to the glycosyl hydrolase 43 family K06113 - 3.2.1.99 8.86e-229 744.0
CMS1_k127_207766_1 Glycosyl hydrolases family 43 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005401 465.0
CMS1_k127_207766_2 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000002574 178.0
CMS1_k127_207766_3 Helix-turn-helix XRE-family like proteins - - - 0.00000001583 59.0
CMS1_k127_2083877_0 (belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family) - - - 0.0000000000000000001578 100.0
CMS1_k127_2083877_1 PFAM MTH538 TIR-like domain (DUF1863) - - - 0.0000000000002727 83.0
CMS1_k127_2083877_2 COG0457 FOG TPR repeat - - - 0.000000003796 66.0
CMS1_k127_2088028_0 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000004064 198.0
CMS1_k127_2088028_1 Outer membrane efflux protein - - - 0.000000000000000000000001077 114.0
CMS1_k127_2102633_0 Belongs to the glycosyl hydrolase 31 family K01811 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0016052,GO:0016787,GO:0016798,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899 3.2.1.177 2.216e-295 934.0
CMS1_k127_2102633_1 candidate xyloglucanase, glycoside hydrolase family 74 protein K01238 - - - 3.48e-217 699.0
CMS1_k127_2102633_2 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 4.781e-211 679.0
CMS1_k127_2102633_3 Pfam Glycosyl hydrolase family 65, N-terminal domain K15923 - 3.2.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004127 589.0
CMS1_k127_2102633_4 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 522.0
CMS1_k127_2102633_5 Type II secretion system (T2SS), protein F - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 459.0
CMS1_k127_2102633_6 AAA domain K06873 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002973 450.0
CMS1_k127_2102633_7 Periplasmic binding protein domain K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 411.0
CMS1_k127_2102633_8 Phosphate acetyl/butaryl transferase K00625 - 2.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 385.0
CMS1_k127_2102633_9 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000006567 236.0
CMS1_k127_2119848_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005666 416.0
CMS1_k127_2119848_1 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III domain protein K22317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002459 377.0
CMS1_k127_2119848_2 Biotin and Thiamin Synthesis associated domain K03150 - 4.1.99.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009792 359.0
CMS1_k127_2119848_3 alpha/beta hydrolase fold K22318 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 343.0
CMS1_k127_2119848_4 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 0.0000000000000000003319 89.0
CMS1_k127_2119848_5 thiamine diphosphate biosynthetic process K03154 - - 0.000000000006362 68.0
CMS1_k127_2129196_0 DNA primase activity K17680 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000008623 253.0
CMS1_k127_2129196_1 self proteolysis - - - 0.0000000000000000000000003837 109.0
CMS1_k127_2129196_2 pathogenesis - - - 0.00000000000000000613 93.0
CMS1_k127_2129196_3 HipA N-terminal domain K07154 - 2.7.11.1 0.0000000000000008637 82.0
CMS1_k127_2129196_4 Helix-turn-helix - - - 0.00000000000003877 74.0
CMS1_k127_2129196_5 NTF2 fold immunity protein - - - 0.0000008507 51.0
CMS1_k127_213432_0 Pfam:Arch_ATPase K02450 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 346.0
CMS1_k127_213432_1 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 322.0
CMS1_k127_213432_2 PFAM aminotransferase class I and II K14155 - 4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000001075 252.0
CMS1_k127_213432_3 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000003346 243.0
CMS1_k127_213432_4 Septum formation initiator - - - 0.00000000002453 68.0
CMS1_k127_213432_5 - - - - 0.0000000008418 67.0
CMS1_k127_2140610_0 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002453 274.0
CMS1_k127_2140610_1 LPP20 lipoprotein - - - 0.00000000000000000000000000000000000000000000000000000000000000001757 229.0
CMS1_k127_2140610_2 RecX family K03565 - - 0.00000000000000000000000000000000000008764 145.0
CMS1_k127_2140610_3 - - - - 0.0009656 49.0
CMS1_k127_2148208_0 Alpha amylase, catalytic domain K01182,K01187,K05343 - 3.2.1.1,3.2.1.10,3.2.1.20,5.4.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008084 456.0
CMS1_k127_2148208_1 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0000000000000000000000000000000000000000000000000006314 187.0
CMS1_k127_2159239_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005699 482.0
CMS1_k127_2159239_1 Dihydrodipicolinate reductase, C-terminus K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006054 337.0
CMS1_k127_2159239_2 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 320.0
CMS1_k127_2159239_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 290.0
CMS1_k127_2159239_4 ThiF family K22132 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004693 244.0
CMS1_k127_2159239_5 NUDIX domain K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000001248 173.0
CMS1_k127_2159239_6 - - - - 0.000000000000000000000000000000002539 134.0
CMS1_k127_2168861_0 methyltransferase K03183,K15256 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000001115 237.0
CMS1_k127_2168861_1 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000007948 190.0
CMS1_k127_2168861_4 WD domain, G-beta repeat - - - 0.0000000000000000000001816 115.0
CMS1_k127_2168861_5 - - - - 0.000000000000000002608 96.0
CMS1_k127_2168861_6 Psort location Cytoplasmic, score - - - 0.00000000000000571 85.0
CMS1_k127_2173978_0 ATP synthase alpha/beta family, beta-barrel domain K02412 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 535.0
CMS1_k127_2173978_1 Flagellar assembly protein FliH K02411 - - 0.000000000008292 73.0
CMS1_k127_2173978_2 glycogen (starch) synthase activity K16148 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0071704,GO:1901576 2.4.1.342 0.0000000114 57.0
CMS1_k127_2220288_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004425 474.0
CMS1_k127_2220288_1 The M ring may be actively involved in energy transduction K02409 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007259 421.0
CMS1_k127_2220288_2 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000002601 205.0
CMS1_k127_2220288_3 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000009594 171.0
CMS1_k127_2220288_4 Belongs to the flagella basal body rod proteins family K02388 - - 0.000000000000000000000000000000000000004209 150.0
CMS1_k127_2220288_5 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000006404 139.0
CMS1_k127_2220288_6 Involved in DNA repair and RecF pathway recombination K03474,K03584 GO:0008150,GO:0009314,GO:0009628,GO:0050896 2.6.99.2 0.00000000000000000001675 99.0
CMS1_k127_2220288_7 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.00000000000000000009648 94.0
CMS1_k127_2220288_8 Tetratricopeptide repeat - - - 0.0000000000000000007768 91.0
CMS1_k127_2220288_9 Flagellar hook-basal body complex protein FliE K02408 - - 0.00000000003182 70.0
CMS1_k127_2226821_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003676 273.0
CMS1_k127_2226821_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000007239 257.0
CMS1_k127_2226821_2 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000001161 258.0
CMS1_k127_2226821_3 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000000007886 128.0
CMS1_k127_2226821_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000003566 119.0
CMS1_k127_2228815_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 1.078e-204 645.0
CMS1_k127_2228815_2 methyltransferase - - - 0.000000000002345 70.0
CMS1_k127_228058_0 Repeat of Unknown Function (DUF347) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 388.0
CMS1_k127_228058_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004035 329.0
CMS1_k127_228058_2 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.000000000000000000000000000000003648 130.0
CMS1_k127_2307353_0 urea carboxylase K01941 - 6.3.4.6 0.0 1463.0
CMS1_k127_2307353_1 Periplasmic binding protein K11959 - - 3.73e-215 674.0
CMS1_k127_2307353_10 PFAM Bacterial regulatory proteins, gntR family - - - 0.00000000000000000000000000000000000000000000007316 177.0
CMS1_k127_2307353_11 PFAM transposase IS4 family protein - - - 0.000000000000003592 78.0
CMS1_k127_2307353_13 Lipocalin-like domain - - - 0.0008427 51.0
CMS1_k127_2307353_2 Allophanate hydrolase K01457 - 3.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 606.0
CMS1_k127_2307353_3 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 466.0
CMS1_k127_2307353_4 Urea ABC transporter permease K11960 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 460.0
CMS1_k127_2307353_5 urea ABC transporter, ATP-binding protein K11962 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 366.0
CMS1_k127_2307353_6 TIGRFAM outer membrane autotransporter barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007401 368.0
CMS1_k127_2307353_7 Belongs to the group II decarboxylase family K01580 - 4.1.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005089 320.0
CMS1_k127_2307353_8 urea ABC transporter, ATP-binding protein K11963 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 292.0
CMS1_k127_2307353_9 - - - - 0.000000000000000000000000000000000000000000000000001128 192.0
CMS1_k127_2322651_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 7.882e-209 656.0
CMS1_k127_2322651_1 iron-sulfur cluster K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 434.0
CMS1_k127_2322651_2 PFAM Iron-containing alcohol dehydrogenase K00005 - 1.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 379.0
CMS1_k127_2322651_3 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 364.0
CMS1_k127_2322651_4 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009545 352.0
CMS1_k127_2322651_5 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006718 276.0
CMS1_k127_2322651_6 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001849 265.0
CMS1_k127_2322651_7 PFAM Lipocalin family protein K03098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008628 247.0
CMS1_k127_2322651_8 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000000000001201 220.0
CMS1_k127_2322651_9 PFAM Iron-containing alcohol dehydrogenase K00001,K00005 - 1.1.1.1,1.1.1.6 0.000000000006898 74.0
CMS1_k127_2386926_0 4fe-4S ferredoxin, iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 1.619e-214 685.0
CMS1_k127_2386926_1 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.0000000000000000000000000000000000000000000000000007218 187.0
CMS1_k127_2386926_2 PFAM Methylene-tetrahydrofolate reductase C terminal - - - 0.000000000000007962 79.0
CMS1_k127_238707_0 Belongs to the glycosyl hydrolase 31 family K01811 - 3.2.1.177 0.0 1281.0
CMS1_k127_238707_1 Beta-L-arabinofuranosidase, GH127 K09955 - - 0.0 1194.0
CMS1_k127_238707_2 Belongs to the glycosyl hydrolase 31 family K01811 - 3.2.1.177 3.339e-199 642.0
CMS1_k127_2395848_0 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 361.0
CMS1_k127_2395848_1 - - - - 0.00000000000000000000000009513 113.0
CMS1_k127_2400834_0 L-aspartate oxidase K00278 - 1.4.3.16 4.521e-216 685.0
CMS1_k127_2400834_1 PFAM glycoside hydrolase family 5 K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 307.0
CMS1_k127_2400834_2 DNA alkylation repair - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000448 247.0
CMS1_k127_2400834_3 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009995 250.0
CMS1_k127_2400834_4 helix_turn_helix, mercury resistance - - - 0.0000000000000000000000000000000006742 136.0
CMS1_k127_2400834_5 pfkB family carbohydrate kinase - - - 0.000000000000000002955 85.0
CMS1_k127_2400834_6 photosynthesis - - - 0.0005274 50.0
CMS1_k127_241546_0 PFAM CMP dCMP deaminase zinc-binding K01489 - 3.5.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009956 327.0
CMS1_k127_241546_1 KAP family P-loop domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003445 297.0
CMS1_k127_241546_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000003082 224.0
CMS1_k127_241546_3 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000001206 154.0
CMS1_k127_241546_4 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000001084 130.0
CMS1_k127_241546_5 COG4747 ACT domain-containing protein - - - 0.0000000000000000000000419 104.0
CMS1_k127_241546_6 Conserved Protein - - - 0.000000000000000005189 87.0
CMS1_k127_241546_7 beta-lactamase domain protein K02238 - - 0.0000002455 57.0
CMS1_k127_2422810_0 AcrB/AcrD/AcrF family K03296,K18138 - - 2.718e-265 835.0
CMS1_k127_2422810_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004797 260.0
CMS1_k127_2422810_2 Transcriptional regulator K03577 - - 0.00000000000000000001391 94.0
CMS1_k127_2434895_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 483.0
CMS1_k127_2434895_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005501 420.0
CMS1_k127_2434895_2 Peptidase C26 K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 301.0
CMS1_k127_2434895_3 Haemolysin-III related K11068 - - 0.0000000000000000000000000000000000000000000000000000000000001495 219.0
CMS1_k127_2434895_4 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000003197 179.0
CMS1_k127_2434895_5 Polysaccharide deacetylase K22278 - 3.5.1.104 0.000000000000000000000000004033 121.0
CMS1_k127_2434895_6 - - - - 0.000004273 57.0
CMS1_k127_2438103_0 Beta-Casp domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003066 439.0
CMS1_k127_2438103_1 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000763 422.0
CMS1_k127_2438103_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000004771 55.0
CMS1_k127_248741_0 RQC K03654 - 3.6.4.12 5.105e-207 666.0
CMS1_k127_248741_1 Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP) K00209 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004318,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050343,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.3.1.44,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 445.0
CMS1_k127_248741_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 378.0
CMS1_k127_248741_3 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 355.0
CMS1_k127_248741_4 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006745 335.0
CMS1_k127_248741_5 Putative lumazine-binding - - - 0.00000000000000000000000000000000000000000000000000000003104 203.0
CMS1_k127_248741_6 oxygen carrier activity K03406,K07216 - - 0.000000000000000000000000000000000003399 147.0
CMS1_k127_2501287_0 UDP-N-acetyl-D-mannosamine dehydrogenase activity K02474,K13015 - 1.1.1.136 2.932e-199 627.0
CMS1_k127_2501287_1 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004444 326.0
CMS1_k127_2501287_2 Epimerase dehydratase K08679 - 5.1.3.6 0.000000000000000000000000000000000001177 144.0
CMS1_k127_2541156_0 GcpE protein K03526 - 1.17.7.1,1.17.7.3 4.316e-195 629.0
CMS1_k127_2541156_1 Membrane-associated phospholipid phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 428.0
CMS1_k127_2541156_2 2-dehydro-3-deoxyphosphooctonate aldolase K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 379.0
CMS1_k127_2541156_3 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007206 371.0
CMS1_k127_2541156_4 COG0471 Di- and tricarboxylate transporters - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007148 340.0
CMS1_k127_2541156_5 Pyruvate:ferredoxin oxidoreductase core domain II K03737 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000631 271.0
CMS1_k127_2541156_6 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000007837 220.0
CMS1_k127_2541156_7 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000005811 60.0
CMS1_k127_2541156_8 PFAM ATP-binding region, ATPase domain protein - - - 0.0000002684 59.0
CMS1_k127_2545660_0 Pfam:AHS1 K01941 - 6.3.4.6 0.0 1486.0
CMS1_k127_2545660_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 563.0
CMS1_k127_2545660_2 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 480.0
CMS1_k127_2545660_3 Domain of unknown function (DUF1989) K09967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 341.0
CMS1_k127_2545660_4 Domain of unknown function (DUF1989) K09967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006731 321.0
CMS1_k127_2545660_5 belongs to the glycosyl hydrolase 13 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000009877 247.0
CMS1_k127_2545660_6 Transposase - - - 0.0000000000000000000000000005866 119.0
CMS1_k127_2545660_7 TIGRFAM TonB family protein K03832 - - 0.00000001183 61.0
CMS1_k127_2550589_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 461.0
CMS1_k127_2550589_1 Diadenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004737 464.0
CMS1_k127_2550589_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.000000000000000000000000000002072 124.0
CMS1_k127_2552857_0 COGs COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004455 504.0
CMS1_k127_2552857_1 ATPase family associated with various cellular activities (AAA) - - - 0.0000000000000007111 81.0
CMS1_k127_2559935_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 569.0
CMS1_k127_2559935_1 PFAM flagellin domain protein - - - 0.0000000000000000000000000000000000000000004412 171.0
CMS1_k127_2559935_2 Beta galactosidase small chain K01190 - 3.2.1.23 0.0000000000000000000000000005258 118.0
CMS1_k127_2610934_0 exonuclease RecJ K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007411 547.0
CMS1_k127_2610934_1 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000851 305.0
CMS1_k127_2610934_2 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000001765 243.0
CMS1_k127_2610934_3 L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000002292 245.0
CMS1_k127_2610934_4 PFAM CBS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000002566 226.0
CMS1_k127_2610934_5 queuosine salvage K09125 - - 0.00000000000000000000000000000000007442 141.0
CMS1_k127_2610934_6 Chagasin family peptidase inhibitor I42 K14475 - - 0.0001658 50.0
CMS1_k127_2648211_0 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 394.0
CMS1_k127_2648211_1 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 317.0
CMS1_k127_2648211_2 Nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000311 278.0
CMS1_k127_2648211_3 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000001099 158.0
CMS1_k127_2661829_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 317.0
CMS1_k127_2661829_1 HIT domain K02503 - - 0.000000000000003219 75.0
CMS1_k127_2661829_2 - - - - 0.00000005589 60.0
CMS1_k127_2670217_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 6.78e-249 787.0
CMS1_k127_2670217_1 MotA/TolQ/ExbB proton channel family K02556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 326.0
CMS1_k127_2670217_2 FlhB HrpN YscU SpaS Family K02401 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 313.0
CMS1_k127_2670217_3 Sigma-70 region 3 K02405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004568 255.0
CMS1_k127_2670217_4 protein localization to endoplasmic reticulum K02404 - - 0.0000000000000000000000000000000000000000000000000000000002685 217.0
CMS1_k127_2670217_5 Bacterial export proteins, family 1 K02421 - - 0.000000000000000000000000000000008466 137.0
CMS1_k127_2670217_6 Bacterial export proteins, family 3 K02420 - - 0.0000000000000000001774 90.0
CMS1_k127_2670217_7 Helix-turn-helix XRE-family like proteins - - - 0.000009605 52.0
CMS1_k127_2670852_0 Belongs to the glycosyl hydrolase 31 family K07407 - 3.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 542.0
CMS1_k127_2670852_1 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000004195 183.0
CMS1_k127_2685703_0 Carbamoyl-phosphate synthetase ammonia chain K01955 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000801 232.0
CMS1_k127_2685703_1 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.000000000000000000000000000000000002824 140.0
CMS1_k127_2685703_2 glycosyl transferase family 8 - - - 0.0000000000000000000000127 113.0
CMS1_k127_2685703_3 glycosyl transferase family 8 - - - 0.0000000000000000000001751 109.0
CMS1_k127_2735756_0 PFAM phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 2.765e-230 731.0
CMS1_k127_2735756_1 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009558 510.0
CMS1_k127_2735756_2 D12 class N6 adenine-specific DNA methyltransferase K07318 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004465 417.0
CMS1_k127_2735756_3 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 324.0
CMS1_k127_2735756_4 PFAM chemotaxis sensory transducer K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003653 285.0
CMS1_k127_2735756_5 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000001367 100.0
CMS1_k127_2781212_0 Psort location Cytoplasmic, score - - - 3.801e-228 710.0
CMS1_k127_2781212_1 PFAM iron-containing alcohol dehydrogenase K00001,K08325 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005521 581.0
CMS1_k127_2781212_2 Belongs to the glycosyl hydrolase 2 family K01190 - 3.2.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006215 452.0
CMS1_k127_2781212_3 helix-turn-helix- domain containing protein, AraC type - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000957 332.0
CMS1_k127_2781212_4 L-fucose isomerase, C-terminal domain - - - 0.000000000000000000000000000008145 118.0
CMS1_k127_2781212_5 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion - - - 0.000000001394 62.0
CMS1_k127_2785932_0 Glycosyl hydrolase family 115 - - - 0.0 1024.0
CMS1_k127_2785932_1 Fibronectin type III-like domain K05349 - 3.2.1.21 1.708e-232 739.0
CMS1_k127_2785932_2 Beta-xylanase - - - 3.395e-198 634.0
CMS1_k127_2785932_3 Beta-galactosidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 557.0
CMS1_k127_2785932_4 Short-chain dehydrogenase reductase sdr - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000849 329.0
CMS1_k127_2785932_5 transport - - - 0.0000000000000000000000000000000000000000000000001078 180.0
CMS1_k127_2785932_6 Catalyzes the dehydration of D-mannonate K01686 - 4.2.1.8 0.00000000000000000000000000000000000017 145.0
CMS1_k127_2807034_0 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 415.0
CMS1_k127_2807034_1 ubiquinone menaquinone biosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006984 243.0
CMS1_k127_2807034_2 Putative esterase K07017 - - 0.000000000000000000000000000000000000002504 153.0
CMS1_k127_2811202_0 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000004683 269.0
CMS1_k127_2811202_1 - - - - 0.0000000000008347 74.0
CMS1_k127_2811480_0 Efflux pump membrane transporter K18138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005457 413.0
CMS1_k127_2811480_1 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007058 282.0
CMS1_k127_2811480_2 beta-galactosidase activity - - - 0.00001739 51.0
CMS1_k127_2813429_0 Insulinase (Peptidase family M16) K07263 - - 2.449e-242 781.0
CMS1_k127_2813429_1 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 297.0
CMS1_k127_2813429_2 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000001192 199.0
CMS1_k127_2813429_3 SnoaL-like domain - - - 0.00000000000000000000000000000000000008352 145.0
CMS1_k127_2826200_0 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 482.0
CMS1_k127_2826200_1 - - - - 0.0000000000000000000001292 98.0
CMS1_k127_2826200_2 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.00000000000004364 83.0
CMS1_k127_2859164_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 540.0
CMS1_k127_2859164_1 Phosphoglycerate kinase K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005408 476.0
CMS1_k127_2859164_2 PFAM glycosyl transferase family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000005799 255.0
CMS1_k127_2859164_3 HDOD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000214 240.0
CMS1_k127_2859164_4 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000978 206.0
CMS1_k127_2859164_5 Acid phosphatase homologues - - - 0.0000000000000000000000000000000000000000002788 164.0
CMS1_k127_2859164_6 membrane - - - 0.000000000000000000000000006322 113.0
CMS1_k127_2882124_0 Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 604.0
CMS1_k127_2882124_1 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004714 608.0
CMS1_k127_2882124_10 Involved in the anomeric conversion of L-fucose K02431 - 5.1.3.29 0.000000000000000000000000000000000000000000000000000000000000007101 218.0
CMS1_k127_2882124_11 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000005131 176.0
CMS1_k127_2882124_12 NUDIX hydrolase - - - 0.0000000000000000000000000000000000000000000002074 173.0
CMS1_k127_2882124_13 PFAM alpha-acetolactate decarboxylase K01575 - 4.1.1.5 0.0000000000000000000000000000000000000008028 168.0
CMS1_k127_2882124_14 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.00000000000000000000000000000000000000324 155.0
CMS1_k127_2882124_15 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.000000000000000000000000000003079 122.0
CMS1_k127_2882124_2 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006382 576.0
CMS1_k127_2882124_3 aldo-keto reductase (NADP) activity K00002,K17743 - 1.1.1.2,1.1.1.307 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007979 552.0
CMS1_k127_2882124_4 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002987 491.0
CMS1_k127_2882124_5 Alanine dehydrogenase/PNT, N-terminal domain K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002019 458.0
CMS1_k127_2882124_6 Two component, sigma54 specific, transcriptional regulator, Fis family K03974 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 369.0
CMS1_k127_2882124_7 AraC-like ligand binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007556 365.0
CMS1_k127_2882124_8 DNA polymerase III K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004583 325.0
CMS1_k127_2882124_9 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001926 273.0
CMS1_k127_2883788_0 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 392.0
CMS1_k127_2883788_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 394.0
CMS1_k127_2883788_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007511 318.0
CMS1_k127_2883788_3 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001308 269.0
CMS1_k127_2883788_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000001052 148.0
CMS1_k127_2883788_5 Belongs to the N-Me-Phe pilin family K02650 - - 0.000000000000000000000000000001198 127.0
CMS1_k127_2883788_6 Methyltransferase domain - - - 0.000000000000000000000002235 113.0
CMS1_k127_290118_0 transport system permease component K13895 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 407.0
CMS1_k127_290118_1 ABC transporter (Permease) K02033,K13894 - - 0.000000000000000000000000000000000000000000000000000000004101 203.0
CMS1_k127_290118_2 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.000000000000000000000000000000000000000000000000001395 192.0
CMS1_k127_290118_3 ABC transporter K11085 - - 0.0000000000000000000000000000000000000000000364 173.0
CMS1_k127_2919912_0 COGs COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 610.0
CMS1_k127_2919912_1 (ABC) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000003558 237.0
CMS1_k127_2919912_2 Helix-turn-helix domain - - - 0.00007814 47.0
CMS1_k127_2920756_0 Domain of unknown function (DUF3552) K18682 - - 9.628e-246 767.0
CMS1_k127_2920756_1 YmdB-like protein K09769 - - 0.0000000000000000000000000000000000000000000003206 168.0
CMS1_k127_293525_0 Glycosyl hydrolase family 65, N-terminal domain K15923 - 3.2.1.51 4.717e-276 871.0
CMS1_k127_293525_1 Fusaric acid resistance protein-like - - - 3.263e-256 810.0
CMS1_k127_293525_10 Psort location Cytoplasmic, score - - - 0.00000000002293 71.0
CMS1_k127_293525_11 gas vesicle protein - - - 0.00000003321 63.0
CMS1_k127_293525_2 Anion-transporting ATPase K01551 - 3.6.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 618.0
CMS1_k127_293525_3 glycogen (starch) synthase activity K20444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 392.0
CMS1_k127_293525_4 Pfam Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000003457 239.0
CMS1_k127_293525_5 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth - - - 0.000000000000000000000000000001331 125.0
CMS1_k127_293525_6 protein, GvpL GvpF - - - 0.0000000000000000000001359 98.0
CMS1_k127_293525_7 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.0000000000000000000002164 97.0
CMS1_k127_293525_8 gas vesicle protein - - - 0.0000000000000000000008739 104.0
CMS1_k127_293525_9 gas vesicle protein - - - 0.000000000000007432 77.0
CMS1_k127_2938491_1 TIM-barrel fold metal-dependent hydrolase - - - 0.0000000000000000000000000000000000000000000000000004886 200.0
CMS1_k127_2938491_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000003997 59.0
CMS1_k127_2938491_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000005348 64.0
CMS1_k127_2939154_0 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 437.0
CMS1_k127_2939154_1 Phosphofructokinase K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004345 385.0
CMS1_k127_2939154_2 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.0000000000000000000000000000000001424 146.0
CMS1_k127_294028_0 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) K01083 - 3.1.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 302.0
CMS1_k127_294028_1 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004914 286.0
CMS1_k127_294028_2 MacB-like periplasmic core domain - - - 0.000000002296 62.0
CMS1_k127_2952506_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006079 452.0
CMS1_k127_2952506_1 tyrosine recombinase K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004261 300.0
CMS1_k127_2952506_2 flagellar protein fliS K02422 GO:0001539,GO:0003674,GO:0005198,GO:0006928,GO:0008150,GO:0009987,GO:0040011,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0097588 - 0.0001089 49.0
CMS1_k127_296077_0 Methionine synthase K00548 - 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 531.0
CMS1_k127_296077_1 ATP-binding region ATPase domain protein K02487,K03407,K06596 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 516.0
CMS1_k127_296077_2 Thermophilic metalloprotease (M29) K19689 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 501.0
CMS1_k127_296077_3 ThiF family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 380.0
CMS1_k127_296077_4 Adenosine/AMP deaminase K01488 - 3.5.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003233 319.0
CMS1_k127_2965411_0 Putative esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004502 386.0
CMS1_k127_2965411_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03471 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 371.0
CMS1_k127_2965411_3 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000002892 75.0
CMS1_k127_2971492_0 ABC-type uncharacterized transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 344.0
CMS1_k127_2971492_1 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006515 314.0
CMS1_k127_2971492_2 Domain of unknown function (DUF4340) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 323.0
CMS1_k127_2971492_3 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000005951 199.0
CMS1_k127_2988103_0 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002483 366.0
CMS1_k127_2988103_1 Flavin containing amine oxidoreductase K00231,K14266 - 1.14.19.9,1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009146 301.0
CMS1_k127_2988103_2 PFAM chemotaxis sensory transducer K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001303 274.0
CMS1_k127_2988103_3 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000185 267.0
CMS1_k127_2988103_4 thiolester hydrolase activity K01181,K06889 - 3.2.1.8 0.0000000000000000000000000000000000000000000001101 194.0
CMS1_k127_2988103_5 HDOD domain - - - 0.000000000000000000000000000000000000002033 157.0
CMS1_k127_2988103_6 Ferric uptake regulator family K03711 - - 0.000000000000000000001561 99.0
CMS1_k127_2988103_7 - - - - 0.000000000000003342 76.0
CMS1_k127_2992684_0 Belongs to the glycosyl hydrolase 2 family - - - 0.0 1058.0
CMS1_k127_2992684_1 Receptor - - - 4.94e-272 849.0
CMS1_k127_2992684_2 phosphate-selective porin O and P - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006145 408.0
CMS1_k127_2992684_3 quaternary-ammonium-compound-transporting ATPase activity K02000 - 3.6.3.32 0.00000000000000000000000000003358 117.0
CMS1_k127_300759_0 SNF2 family N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007332 582.0
CMS1_k127_300759_1 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002087 268.0
CMS1_k127_300759_2 Tetratricopeptide repeat - - - 0.00000000000000000000000003685 124.0
CMS1_k127_302572_0 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 5.807e-196 638.0
CMS1_k127_302572_1 Aldo/keto reductase family - - - 0.00000000000004537 72.0
CMS1_k127_3032113_0 NAD+ binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 321.0
CMS1_k127_3032113_1 cytidine deaminase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000006099 226.0
CMS1_k127_3032113_10 Bacteriophage Mu Gam like protein - - - 0.0001216 51.0
CMS1_k127_3032113_2 NACHT domain - - - 0.000000000000000000000000000000000000000000000000000000000000001643 243.0
CMS1_k127_3032113_3 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000007763 175.0
CMS1_k127_3032113_4 - - - - 0.0000000000000000000000000000000000004468 162.0
CMS1_k127_3032113_5 - - - - 0.00000000000000000000000000000000001761 151.0
CMS1_k127_3032113_6 AAA domain - - - 0.0000000000000000000000008873 118.0
CMS1_k127_3032113_7 ParB-like nuclease domain - - - 0.00000000000000000000003849 111.0
CMS1_k127_3032113_8 - - - - 0.0000000000000000000003737 109.0
CMS1_k127_3032113_9 Mu-like prophage host-nuclease inhibitor protein Gam - - - 0.000008192 54.0
CMS1_k127_3054865_0 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 1.543e-199 629.0
CMS1_k127_3054865_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 389.0
CMS1_k127_3054865_2 Serine acetyltransferase, N-terminal K00640 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009001,GO:0009058,GO:0009069,GO:0009070,GO:0009314,GO:0009333,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016053,GO:0016407,GO:0016412,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019344,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050896,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003394 299.0
CMS1_k127_3054865_3 Redoxin - - - 0.0000000000000000000000000000000000000000000000001322 184.0
CMS1_k127_3054865_4 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.000000000000000002544 92.0
CMS1_k127_3054865_5 Putative peptidoglycan binding domain - - - 0.000000000000001577 90.0
CMS1_k127_3054865_6 PAP2 superfamily K19302 - 3.6.1.27 0.00000000006132 72.0
CMS1_k127_3055789_0 alpha/beta hydrolase fold K01066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 490.0
CMS1_k127_3055789_1 Transcriptional regulator K12146,K15836 GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0001150,GO:0001158,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035326,GO:0042802,GO:0043170,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2000142,GO:2000144,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 497.0
CMS1_k127_3055789_2 Amidohydrolase K07045,K14333,K22213 - 4.1.1.46,4.1.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 293.0
CMS1_k127_3055789_3 PFAM ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000001687 200.0
CMS1_k127_3055789_4 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000003363 160.0
CMS1_k127_3055789_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18302 - - 0.000000000000000000000000000000000000001395 158.0
CMS1_k127_3055789_6 Transcriptional regulator - - - 0.00000000000000000000000000005646 126.0
CMS1_k127_3055789_7 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000005965 110.0
CMS1_k127_3055789_8 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000000000001833 76.0
CMS1_k127_3056613_0 phytanoyl-CoA dioxygenase - - - 0.00000000129 70.0
CMS1_k127_3068953_0 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 476.0
CMS1_k127_3068953_1 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 444.0
CMS1_k127_3068953_10 Helix-turn-helix domain - - - 0.00000000000000000000000000009984 126.0
CMS1_k127_3068953_11 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.000000000000000000001396 102.0
CMS1_k127_3068953_13 - - - - 0.00000000000009493 80.0
CMS1_k127_3068953_2 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000093 432.0
CMS1_k127_3068953_3 Uncharacterized protein conserved in bacteria (DUF2219) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007521 289.0
CMS1_k127_3068953_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000002673 272.0
CMS1_k127_3068953_5 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000001638 262.0
CMS1_k127_3068953_6 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000002029 260.0
CMS1_k127_3068953_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000008632 224.0
CMS1_k127_3068953_8 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.000000000000000000000000000000000000000000002426 170.0
CMS1_k127_3068953_9 Addiction module toxin, RelE StbE family K06218 - - 0.0000000000000000000000000000000000001187 145.0
CMS1_k127_3070669_0 ABC1 family K03688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005458 503.0
CMS1_k127_3070669_1 granule-associated protein - - - 0.0000000000001028 74.0
CMS1_k127_3101789_0 transporter of a GTP-driven Fe(2 ) uptake system - - - 1.812e-210 673.0
CMS1_k127_3101789_1 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 566.0
CMS1_k127_3101789_2 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009535 407.0
CMS1_k127_3101789_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004508 413.0
CMS1_k127_3101789_4 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 305.0
CMS1_k127_3101789_5 Nuclease-related domain - - - 0.000000000000000000000000001567 127.0
CMS1_k127_3101789_6 PFAM membrane protein of K08972 - - 0.0000000000000002379 84.0
CMS1_k127_3101789_7 iron dependent repressor K03709 - - 0.00000000000009752 75.0
CMS1_k127_3101789_8 COGs COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein - - - 0.00000000000361 76.0
CMS1_k127_3101789_9 Metallo-beta-lactamase superfamily - - - 0.0004386 50.0
CMS1_k127_3110192_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 5.583e-268 840.0
CMS1_k127_3110192_1 Beta-L-arabinofuranosidase, GH127 K09955 - - 1.975e-252 793.0
CMS1_k127_3110192_2 PFAM SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000000288 233.0
CMS1_k127_3110192_3 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000005047 224.0
CMS1_k127_3156660_0 efflux transmembrane transporter activity - - - 2.061e-195 636.0
CMS1_k127_3156660_1 Secretin and TonB N terminus short domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 535.0
CMS1_k127_3156660_2 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 456.0
CMS1_k127_3156660_3 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 312.0
CMS1_k127_3156660_4 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000001042 246.0
CMS1_k127_3156660_5 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000124 145.0
CMS1_k127_3156660_6 abc-type fe3 -hydroxamate transport system, periplasmic component K02016,K21701 - - 0.00000000000001044 83.0
CMS1_k127_3162350_0 COG NOG06097 non supervised orthologous group - - - 0.0 1092.0
CMS1_k127_3162350_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 2.207e-226 711.0
CMS1_k127_3162350_10 HAD-hyrolase-like - - - 0.0000000000000000000000000000000000002029 149.0
CMS1_k127_3162350_11 PFAM AMP-dependent synthetase and ligase K01895 - 6.2.1.1 0.00000000000000000000000000000000677 129.0
CMS1_k127_3162350_12 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000000000008812 119.0
CMS1_k127_3162350_13 Protein of unknown function (DUF721) - - - 0.000000000000000000001963 98.0
CMS1_k127_3162350_14 Response regulator receiver - - - 0.000000000000000000006134 104.0
CMS1_k127_3162350_15 Domain of unknown function (DUF1842) - - - 0.0000000000000375 79.0
CMS1_k127_3162350_16 OsmC-like protein - - - 0.00000000000008934 78.0
CMS1_k127_3162350_2 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 8.491e-214 672.0
CMS1_k127_3162350_3 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K00895,K21071 - 2.7.1.11,2.7.1.90 1.358e-199 629.0
CMS1_k127_3162350_4 Belongs to the glycosyl hydrolase 43 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 590.0
CMS1_k127_3162350_5 Belongs to the ClpX chaperone family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 589.0
CMS1_k127_3162350_6 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 323.0
CMS1_k127_3162350_7 GrpB protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001423 243.0
CMS1_k127_3162350_8 Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000007148 172.0
CMS1_k127_3162350_9 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000005531 166.0
CMS1_k127_3163248_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001086 260.0
CMS1_k127_3163248_1 MacB-like periplasmic core domain - - - 0.000000000000000000000003524 113.0
CMS1_k127_3174404_0 carbohydrate binding K00702 - 2.4.1.20 0.0 1045.0
CMS1_k127_3174404_1 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 364.0
CMS1_k127_3174404_2 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000128 294.0
CMS1_k127_3174404_3 -acetyltransferase K17840 - 2.3.1.59 0.00000000000000000000000000000000000000000000000000000000000000002036 233.0
CMS1_k127_3174404_4 cell wall hydrolase K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000003335 229.0
CMS1_k127_3174404_5 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000005877 202.0
CMS1_k127_3174404_6 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000003239 199.0
CMS1_k127_3174404_7 RmuC family K09760 - - 0.000000000000000000000000000000005083 132.0
CMS1_k127_3192937_0 Adenylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005854 430.0
CMS1_k127_3192937_1 Adenylate cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001683 372.0
CMS1_k127_3192937_2 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000001339 213.0
CMS1_k127_3244001_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 306.0
CMS1_k127_3244001_2 lysine 2,3-aminomutase K01843 - 5.4.3.2 0.000000000000000000000000000000000000000000000000000000000000005387 231.0
CMS1_k127_3244001_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000569 222.0
CMS1_k127_3244001_4 TIGRFAM Addiction module killer protein - - - 0.00000000000000000000000000000000000000000000000000002115 190.0
CMS1_k127_3244001_5 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000002894 198.0
CMS1_k127_3244001_6 TIGRFAM addiction module antidote protein - - - 0.00000000000000000000000000000000000000000000000001628 180.0
CMS1_k127_3244001_7 vancomycin resistance protein K18346 - - 0.00000000000000000000000000000000000003413 153.0
CMS1_k127_3244001_8 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000009562 121.0
CMS1_k127_3244001_9 Transposase IS200 like K07491 - - 0.000001979 49.0
CMS1_k127_325858_0 transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006016 636.0
CMS1_k127_325858_1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006616 557.0
CMS1_k127_325858_2 Major facilitator Superfamily K03292,K16248 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004156 519.0
CMS1_k127_325858_3 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000003471 266.0
CMS1_k127_325858_4 DJ-1/PfpI family K03152 - 3.5.1.124 0.00000000000000000000000000000000000000000000000001994 185.0
CMS1_k127_325858_5 Autotransporter beta-domain - - - 0.0000000000000000000000000000000000000001214 170.0
CMS1_k127_3262448_0 COGs COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein - - - 0.000000000000000000000002936 108.0
CMS1_k127_3262448_1 - - - - 0.0000000000000000000004677 104.0
CMS1_k127_3262448_2 - - - - 0.000000000000000004563 88.0
CMS1_k127_3262448_3 - - - - 0.00000000252 61.0
CMS1_k127_3262448_4 - - - - 0.000002547 58.0
CMS1_k127_3269011_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1233.0
CMS1_k127_3269011_1 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004268 379.0
CMS1_k127_3269011_2 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0000000000000000000000000000000000000000000000000000000000000000003321 261.0
CMS1_k127_3273188_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 603.0
CMS1_k127_3273188_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 400.0
CMS1_k127_3273188_2 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000000007129 214.0
CMS1_k127_3273188_3 low molecular weight K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000002929 167.0
CMS1_k127_3273188_4 - - - - 0.000000000000000000000000000000009083 132.0
CMS1_k127_3273188_5 RNA recognition motif - - - 0.0000000000000000000000002218 110.0
CMS1_k127_3295464_0 Binding-protein-dependent transport system inner membrane component K02001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 297.0
CMS1_k127_3295464_1 Substrate binding domain of ABC-type glycine betaine transport system K02002,K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003761 286.0
CMS1_k127_3295464_2 Domain in cystathionine beta-synthase and other proteins. K02000 - 3.6.3.32 0.000000000000000000000000000000000000000000000002101 179.0
CMS1_k127_3308480_0 Belongs to the glycosyl hydrolase 1 family K05350 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008414 497.0
CMS1_k127_3308480_1 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000843 419.0
CMS1_k127_3308480_2 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000004511 229.0
CMS1_k127_3311406_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 404.0
CMS1_k127_3311406_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008148 362.0
CMS1_k127_3311406_2 belongs to the aldehyde dehydrogenase family K06447 GO:0003674,GO:0003824,GO:0004029,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.2.1.71 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000936 294.0
CMS1_k127_3311406_3 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003713 247.0
CMS1_k127_3311406_4 Iron-containing alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000002434 237.0
CMS1_k127_3311406_5 PAS fold - - - 0.000000000000000000000000000000000000000000000000003421 205.0
CMS1_k127_3311406_6 LysE type translocator - - - 0.000000000000000000000000000000000000000000007548 170.0
CMS1_k127_3311406_7 - - - - 0.00000000000000000000000000000005267 137.0
CMS1_k127_3313418_0 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004003 406.0
CMS1_k127_3313418_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 359.0
CMS1_k127_3313418_2 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003968 299.0
CMS1_k127_3313418_3 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003931 258.0
CMS1_k127_3313418_4 PFAM glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000003217 249.0
CMS1_k127_3313418_5 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000006108 240.0
CMS1_k127_3313418_6 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000001058 201.0
CMS1_k127_3313418_7 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.000000000000000000000000000000000000000000000000006119 187.0
CMS1_k127_3313418_8 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000000003957 173.0
CMS1_k127_3313418_9 impB/mucB/samB family - - - 0.0000000000000000000001493 107.0
CMS1_k127_3324378_0 AAA domain, putative AbiEii toxin, Type IV TA system K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007609 332.0
CMS1_k127_3324378_1 ABC 3 transport family K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000086 281.0
CMS1_k127_3324378_2 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004992 265.0
CMS1_k127_3324378_3 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000004633 202.0
CMS1_k127_3324378_4 FecCD transport family K02015 - - 0.00000000000000000000000000000000000000000000001236 172.0
CMS1_k127_3324378_5 Periplasmic binding protein - - - 0.00000000006374 66.0
CMS1_k127_3325155_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 GO:0003674,GO:0003824,GO:0004333,GO:0005488,GO:0005515,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016860,GO:0016862,GO:0016999,GO:0017144,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0048037,GO:0050163,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072350 4.2.1.2 1.67e-282 876.0
CMS1_k127_3325155_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 422.0
CMS1_k127_3325155_2 histidine kinase HAMP region domain protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 387.0
CMS1_k127_3325155_3 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003625 331.0
CMS1_k127_3325155_4 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate K10206 GO:0003674,GO:0003824,GO:0008483,GO:0016740,GO:0016769 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000001104 244.0
CMS1_k127_3325155_5 Lysin motif - - - 0.0000000000000000000000000000002811 130.0
CMS1_k127_3325155_6 SNAP receptor activity - - - 0.0000000000000000003696 92.0
CMS1_k127_3325155_7 Belongs to the ParB family K03497 - - 0.0000000000000001971 82.0
CMS1_k127_3337609_0 Ammonium Transporter Family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004331 496.0
CMS1_k127_3337609_1 Nitrogen regulatory protein P-II - - - 0.00000000000000000000000000000000000000000000000000001963 189.0
CMS1_k127_3337609_2 Putative member of DMT superfamily (DUF486) - - - 0.0000000000000000000000000000000000000000000000001594 179.0
CMS1_k127_3337609_3 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.0000000000000000000000000000000001504 135.0
CMS1_k127_3351642_0 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000006531 240.0
CMS1_k127_3351642_1 PFAM plasmid K06218 - - 0.000000000000000000000000000005384 120.0
CMS1_k127_3351642_3 - - - - 0.000000000000000000003958 95.0
CMS1_k127_3358934_0 Glycosyl hydrolase, family 20, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008908 293.0
CMS1_k127_3358934_1 COG3119 Arylsulfatase A and related enzymes - - - 0.00000000000000000000000000000000000000000001209 169.0
CMS1_k127_3358934_2 PFAM IstB-like ATP binding protein - - - 0.0000000000000000000000000000000000003327 142.0
CMS1_k127_3358934_3 DNA integration K07497 - - 0.00000000000003779 76.0
CMS1_k127_3369499_0 Belongs to the alpha-IPM synthase homocitrate synthase family K02594 - 2.3.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 334.0
CMS1_k127_3369499_2 regulatory protein LysR K02019 - - 0.00000000000000003311 83.0
CMS1_k127_3369499_3 Ferredoxin - - - 0.00006179 45.0
CMS1_k127_3369499_4 hydroxylamine reductase activity K00380 - 1.8.1.2 0.0002231 46.0
CMS1_k127_3371000_0 self proteolysis - - - 4.161e-306 1001.0
CMS1_k127_3371000_1 domain, Protein K07654 - 2.7.13.3 0.000000000000000000000000000000000000000000000000004083 194.0
CMS1_k127_3374138_0 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005588 331.0
CMS1_k127_3374138_1 PFAM Metal-dependent hydrolase HDOD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000542 289.0
CMS1_k127_3374138_2 PFAM ABC 3 transport family K09816,K09819 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001702 283.0
CMS1_k127_3374138_3 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000455 235.0
CMS1_k127_3374138_4 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000002306 229.0
CMS1_k127_3374138_5 PFAM ABC transporter K09817 - - 0.000000000000000000000000000000000000000000000000000000000000002218 226.0
CMS1_k127_3374138_6 PFAM periplasmic solute binding protein K09815 - - 0.0000000000000000000000000003229 125.0
CMS1_k127_3380545_0 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009588 568.0
CMS1_k127_3380545_1 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 470.0
CMS1_k127_3380545_2 Amidase K01457 - 3.5.1.54 0.0000000000000000000000000000000000000000000000001318 183.0
CMS1_k127_3380545_3 NikR C terminal nickel binding domain K07722 - - 0.0000000000000000000000000000000000000000000000004757 179.0
CMS1_k127_338835_0 Histidine kinase - - - 0.00000004686 63.0
CMS1_k127_3408252_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006085 524.0
CMS1_k127_3408252_1 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000005863 200.0
CMS1_k127_3408252_2 serine-type endopeptidase activity K01358 - 3.4.21.92 0.000000005419 57.0
CMS1_k127_3410673_0 PFAM extracellular solute-binding protein family 5 K15580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005358 464.0
CMS1_k127_3410673_1 Sulfate transporter antisigma-factor antagonist STAS K03321 - - 0.0000000000000000000000000000000000000000000000000000000000009072 221.0
CMS1_k127_3410673_2 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000000000000000001028 179.0
CMS1_k127_3410699_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004684 389.0
CMS1_k127_3410699_1 Bacterial extracellular solute-binding protein K11069 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004088 332.0
CMS1_k127_3410699_2 Binding-protein-dependent transport system inner membrane component K11070 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005171 269.0
CMS1_k127_3410699_3 ABC-type spermidine putrescine transport system, permease component I K11071 - - 0.00000000000000000000000000000000000000000001017 166.0
CMS1_k127_3410699_4 rRNA processing K09140 - - 0.0000000000000000000000000000000005881 137.0
CMS1_k127_3410699_5 Histidine kinase A domain protein - - - 0.000000000000005735 87.0
CMS1_k127_3410699_6 response regulator, receiver K03407,K07678,K14978 GO:0000155,GO:0000160,GO:0000302,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009636,GO:0009927,GO:0009987,GO:0010033,GO:0010035,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0036211,GO:0042221,GO:0042493,GO:0042542,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046677,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901700 2.7.13.3 0.000000001623 70.0
CMS1_k127_3410699_7 PFAM LysM domain - - - 0.000008902 55.0
CMS1_k127_3413774_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0 1029.0
CMS1_k127_3413774_1 Pyridine nucleotide-disulphide oxidoreductase - - - 3.947e-201 639.0
CMS1_k127_3413774_10 Serine hydrolase K07002 - - 0.0000000000000000000000000000000000000000000000001624 183.0
CMS1_k127_3413774_11 PFAM Carbohydrate-selective porin OprB - - - 0.0000000000000000000000000000000000000000000001659 183.0
CMS1_k127_3413774_12 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.0000000000000000000000000000000000000000002164 162.0
CMS1_k127_3413774_13 Dinitrogenase iron-molybdenum cofactor - - - 0.0000000000000000000000000000003174 126.0
CMS1_k127_3413774_14 GDYXXLXY protein - - - 0.000000000000000000000006094 110.0
CMS1_k127_3413774_15 PFAM Nitrogen fixation protein of - - - 0.00000000000000000000005509 100.0
CMS1_k127_3413774_16 PFAM Dinitrogenase iron-molybdenum cofactor biosynthesis - - - 0.000000000000000000006397 98.0
CMS1_k127_3413774_17 Histidine kinase K07676,K07687,K10715,K20976 GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009927,GO:0009987,GO:0016020,GO:0016021,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0031224,GO:0031226,GO:0035556,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.00000000003169 69.0
CMS1_k127_3413774_18 Transcriptional regulator - - - 0.0000000005318 65.0
CMS1_k127_3413774_19 iron ion homeostasis K03711,K04758 - - 0.000000006051 59.0
CMS1_k127_3413774_2 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000248 467.0
CMS1_k127_3413774_3 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily K15269 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004421 419.0
CMS1_k127_3413774_4 Cobyrinic acid ac-diamide synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 320.0
CMS1_k127_3413774_5 Iron (Metal) dependent repressor, DtxR family K03709 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008151 305.0
CMS1_k127_3413774_6 Cobyrinic acid a,c-diamide synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006901 295.0
CMS1_k127_3413774_7 Protein of unknown function DUF89 K09116 - - 0.0000000000000000000000000000000000000000000000000000000000000000002407 240.0
CMS1_k127_3413774_8 Transcriptional regulator - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000003487 212.0
CMS1_k127_3413774_9 Predicted membrane protein (DUF2157) - - - 0.00000000000000000000000000000000000000000000000000106 200.0
CMS1_k127_3431570_0 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001395 285.0
CMS1_k127_3431570_1 Major Facilitator Superfamily K08193 - - 0.000000000000000000000000000000000296 134.0
CMS1_k127_3431570_2 Protein of unknown function (DUF493) K09158 - - 0.0000000000000775 76.0
CMS1_k127_3432825_0 choline dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 548.0
CMS1_k127_3432825_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 397.0
CMS1_k127_3432825_2 choline dehydrogenase activity - - - 0.000000000000000000000000000000000004352 138.0
CMS1_k127_3432825_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000007326 72.0
CMS1_k127_3466006_0 Glycoside hydrolase 97 K01187,K21574 - 3.2.1.20,3.2.1.3 1.183e-271 853.0
CMS1_k127_3466006_1 Outer membrane protein beta-barrel family K02014 - - 4.528e-250 800.0
CMS1_k127_3466006_2 Belongs to the glycosyl hydrolase 13 family K21575 GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0016798,GO:0031216,GO:0044464,GO:0071944 3.2.1.135 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 455.0
CMS1_k127_3479320_0 Predicted Permease Membrane Region K07085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007138 483.0
CMS1_k127_3479320_1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 449.0
CMS1_k127_3479320_2 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000002892 187.0
CMS1_k127_3479320_3 Fibronectin type III-like domain K05349 - 3.2.1.21 0.000000000000000000000000000000000007631 139.0
CMS1_k127_3479320_4 PAS domain - - - 0.00000000000000008517 87.0
CMS1_k127_3499990_0 AcrB/AcrD/AcrF family K18989 - - 0.0 1053.0
CMS1_k127_3499990_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 1.907e-320 995.0
CMS1_k127_3499990_10 PFAM biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.00000000000000000000000000000000000000000000001826 179.0
CMS1_k127_3499990_11 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000001919 177.0
CMS1_k127_3499990_12 Cytochrome C assembly protein - - - 0.000000000000000000000000000000962 132.0
CMS1_k127_3499990_13 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000004584 111.0
CMS1_k127_3499990_14 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000134 84.0
CMS1_k127_3499990_15 Helicase associated domain (HA2) Add an annotation K03578 - 3.6.4.13 0.0000000000000307 76.0
CMS1_k127_3499990_16 AntiSigma factor - - - 0.000000000001837 77.0
CMS1_k127_3499990_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 1.823e-194 617.0
CMS1_k127_3499990_3 Acetyltransferase (GNAT) domain K14682 - 2.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004743 421.0
CMS1_k127_3499990_4 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007329 377.0
CMS1_k127_3499990_5 Organic solvent tolerance protein K04744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005172 319.0
CMS1_k127_3499990_6 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000005253 265.0
CMS1_k127_3499990_7 Barrel-sandwich domain of CusB or HlyD membrane-fusion K18990 - - 0.0000000000000000000000000000000000000000000000000000000000000006636 233.0
CMS1_k127_3499990_8 Putative cyclase - - - 0.000000000000000000000000000000000000000000000001067 182.0
CMS1_k127_3499990_9 - - - - 0.00000000000000000000000000000000000000000000000108 195.0
CMS1_k127_3515515_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 3.098e-263 831.0
CMS1_k127_3515515_1 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 360.0
CMS1_k127_3515515_2 carboxylic ester hydrolase activity K03929 - - 0.0000000000000000000000000001942 115.0
CMS1_k127_3527951_0 Sulfate transporter antisigma-factor antagonist STAS K03321 - - 1.364e-206 658.0
CMS1_k127_3527951_1 SAICAR synthetase K01923 - 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 362.0
CMS1_k127_3527951_2 Kinase, PfkB family - - - 0.0000000000000000000000000003962 117.0
CMS1_k127_3540854_0 response to heat K03696 - - 1.316e-303 953.0
CMS1_k127_3540854_1 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000006165 209.0
CMS1_k127_3540854_2 Protein-arginine kinase K19405 - 2.7.14.1 0.000000000000000000000000000000000000000007998 158.0
CMS1_k127_354374_0 SMART chemotaxis sensory transducer K03406,K13487 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007149 462.0
CMS1_k127_354374_1 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008304 302.0
CMS1_k127_354374_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001003 278.0
CMS1_k127_354374_3 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009915 272.0
CMS1_k127_354374_4 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000002071 176.0
CMS1_k127_3589837_0 symporter activity K03307 - - 1.414e-242 760.0
CMS1_k127_3589837_1 Class II Aldolase and Adducin N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005684 310.0
CMS1_k127_3589837_2 Catalyzes the conversion of L-arabinose to L-ribulose K01804 - 5.3.1.4 0.000000000000000000000000000000000000174 142.0
CMS1_k127_3601820_0 ABC transporter, phosphonate, periplasmic substrate-binding protein K02020 - - 0.00000000000000000000000000000000000000000003785 171.0
CMS1_k127_3601820_1 Alginate export - - - 0.00000000000000000000000000000000000000004913 161.0
CMS1_k127_3609776_0 Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 498.0
CMS1_k127_3609776_1 DNA polymerase III K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000662 205.0
CMS1_k127_3609776_2 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 0.00000000000000000000000000000000000000000000000004016 190.0
CMS1_k127_3609776_3 - - - - 0.00000000000000000000000000005558 126.0
CMS1_k127_3609776_4 NIF3 (NGG1p interacting factor 3) - - - 0.000000000000000000000000002388 112.0
CMS1_k127_361041_0 Carbamoyl-phosphate synthetase ammonia chain K01955 - 6.3.5.5 0.0 1178.0
CMS1_k127_361041_1 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 3.482e-278 868.0
CMS1_k127_361041_2 Aminotransferase K00813,K00832 GO:0003674,GO:0003824,GO:0004069,GO:0004838,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006558,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0019438,GO:0019752,GO:0019842,GO:0030170,GO:0033585,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0070279,GO:0070547,GO:0071704,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 2.6.1.1,2.6.1.57 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 488.0
CMS1_k127_361041_3 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 0.00000000000000000000000000001787 123.0
CMS1_k127_3629356_0 Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide K01426 - 3.5.1.4 7.817e-232 717.0
CMS1_k127_3629356_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03696 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 469.0
CMS1_k127_3629356_2 ATPases associated with a variety of cellular activities K11963 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007526 388.0
CMS1_k127_3629356_3 ABC-type branched-chain amino acid transport K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005284 355.0
CMS1_k127_3629356_4 ABC transporter K11962 - - 0.0000000000002367 70.0
CMS1_k127_3632061_0 ribonuclease BN K07058 - - 0.000000000000000000000000000000000000000000000000000000000000002321 236.0
CMS1_k127_3632061_1 PFAM LytTr DNA-binding region - - - 0.00000000000000000000000000000005412 137.0
CMS1_k127_3632061_2 Cytochrome C biogenesis protein transmembrane region - - - 0.000000000000000007209 92.0
CMS1_k127_3644282_0 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 349.0
CMS1_k127_3644282_1 Protein of unknown function (DUF998) - - - 0.00000000000000000000000000000000000000000000005596 176.0
CMS1_k127_3644282_2 - - - - 0.000000000000000000000000000000000005464 141.0
CMS1_k127_3644282_3 - - - - 0.000000000000000000000000000001884 123.0
CMS1_k127_3654004_0 PFAM lipopolysaccharide biosynthesis protein K16554 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 379.0
CMS1_k127_3654004_1 LAO AO transport system K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003489 293.0
CMS1_k127_3658705_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 GO:0002682,GO:0002684,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006950,GO:0008150,GO:0009314,GO:0009380,GO:0009605,GO:0009607,GO:0009628,GO:0016020,GO:0032991,GO:0035821,GO:0042802,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0071944,GO:0075136,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 4.599e-249 787.0
CMS1_k127_3658705_1 Hypothetical methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003962 392.0
CMS1_k127_3658705_2 PFAM ADP-ribosylation Crystallin J1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 349.0
CMS1_k127_3658705_3 inositol monophosphate 1-phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004844 342.0
CMS1_k127_3658705_4 Guanylate kinase homologues. K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000002117 210.0
CMS1_k127_3658705_5 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000005003 201.0
CMS1_k127_3658705_6 - - - - 0.00000000000000000000000000000000000000000000372 174.0
CMS1_k127_3658705_7 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000003386 107.0
CMS1_k127_3658705_9 - - - - 0.0009028 47.0
CMS1_k127_365998_0 Glycosyl hydrolases family 2 - - - 5.95e-255 818.0
CMS1_k127_365998_1 PFAM Major Facilitator Superfamily K08191 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 503.0
CMS1_k127_365998_2 glucuronate isomerase activity K01812 GO:0005975,GO:0005996,GO:0006063,GO:0006064,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0019585,GO:0019586,GO:0019698,GO:0019752,GO:0032787,GO:0042839,GO:0042840,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046396,GO:0046397,GO:0071704,GO:0072329,GO:1901575 5.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000954 246.0
CMS1_k127_365998_3 Uncharacterized protein family UPF0004 K14441 - 2.8.4.4 0.00000000000000000000000000000000000006111 145.0
CMS1_k127_3669681_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 574.0
CMS1_k127_3669681_1 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000001083 233.0
CMS1_k127_3669681_2 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000002654 220.0
CMS1_k127_3687218_0 Belongs to the glycosyl hydrolase 2 family - - - 4.613e-223 719.0
CMS1_k127_3687218_1 Receptor K02014 - - 0.0000000000000000000000000000000000000000008485 176.0
CMS1_k127_3687218_2 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000000000005323 134.0
CMS1_k127_3687218_3 PFAM FeoA family protein K04758 - - 0.000000000074 65.0
CMS1_k127_3687218_4 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.000000001405 61.0
CMS1_k127_3687757_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1221.0
CMS1_k127_3687757_1 Glycosyl hydrolase family 9 - - - 0.0 1077.0
CMS1_k127_3687757_10 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002175 275.0
CMS1_k127_3687757_11 Methyltransferase small domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002251 274.0
CMS1_k127_3687757_12 Lysin motif - - - 0.000000000000000000000000000000000000000000000000001333 193.0
CMS1_k127_3687757_13 competence protein - - - 0.00000000000000000000000000000000000000000000000001791 188.0
CMS1_k127_3687757_14 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.0000000000000000000000000000000000002664 142.0
CMS1_k127_3687757_15 lytic transglycosylase activity - - - 0.00000000000000000000000000002567 131.0
CMS1_k127_3687757_16 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.0000000000000000000000000001428 118.0
CMS1_k127_3687757_17 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.000000000000000000000000002062 113.0
CMS1_k127_3687757_2 PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00335 - 1.6.5.3 1.148e-219 688.0
CMS1_k127_3687757_3 HMGL-like K01571 - 4.1.1.3 2.713e-214 675.0
CMS1_k127_3687757_4 Ammonium Transporter Family K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 580.0
CMS1_k127_3687757_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 574.0
CMS1_k127_3687757_6 Catalyzes the reversible epimerization of cellobiose to 4-O-beta-D-glucopyranosyl-D-mannose (Glc-Man) K16213 - 5.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 435.0
CMS1_k127_3687757_7 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005944 361.0
CMS1_k127_3687757_8 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006667 359.0
CMS1_k127_3687757_9 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 308.0
CMS1_k127_3741810_0 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) - - - 6.734e-279 874.0
CMS1_k127_3741810_1 nickel cation binding K04652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007547 386.0
CMS1_k127_3741810_2 SMART AAA ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003703 373.0
CMS1_k127_3741810_3 Putative Fe-S cluster - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004865 340.0
CMS1_k127_3741810_4 DJ-1/PfpI family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 303.0
CMS1_k127_3741810_5 prepilin-type N-terminal cleavage methylation domain K02456,K02650 - - 0.00002835 50.0
CMS1_k127_3748585_0 Peptidase U32 K08303 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 598.0
CMS1_k127_3748585_1 Fic/DOC family K04095 - - 0.00000000000000000000000000000000000000000000001795 178.0
CMS1_k127_3748585_2 copG family - - - 0.0000000000000001485 86.0
CMS1_k127_3748585_3 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.000000000000009713 76.0
CMS1_k127_3748585_4 Domain of unknown function (DUF4405) - - - 0.0004809 47.0
CMS1_k127_3748585_5 bacterial-type proximal promoter sequence-specific DNA binding K07473 - - 0.0006968 44.0
CMS1_k127_3750954_0 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 409.0
CMS1_k127_3750954_1 Uncharacterized conserved protein (DUF2294) - - - 0.00000000000000000000000000000001347 127.0
CMS1_k127_3755144_0 chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001153 298.0
CMS1_k127_3760061_0 RepB plasmid partitioning protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009332 339.0
CMS1_k127_3760061_1 Mobile mystery protein B - - - 0.000000000000000000000000000000000000000000000000000000000000001159 220.0
CMS1_k127_3762923_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 549.0
CMS1_k127_3762923_1 Heparinase II/III-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006464 418.0
CMS1_k127_3762923_2 shape-determining protein MreC K03570 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002704 253.0
CMS1_k127_3771005_0 B12 binding domain K00548 - 2.1.1.13 8.374e-309 962.0
CMS1_k127_3771005_1 6-phosphogluconolactonase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003225 313.0
CMS1_k127_3771005_2 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000000001285 215.0
CMS1_k127_3771005_3 Ferric uptake regulator family - - - 0.0000000000000000001559 94.0
CMS1_k127_3771005_4 DoxX K15977 - - 0.0000000000000002233 85.0
CMS1_k127_3771818_0 chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002733 301.0
CMS1_k127_3771818_1 5'-3' exonuclease K02335 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000002551 199.0
CMS1_k127_3776522_0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009166 482.0
CMS1_k127_3776522_1 DAHP synthetase I family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 466.0
CMS1_k127_3776522_2 PFAM Glycosyl transferase, group 1 K08256 - 2.4.1.345 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 329.0
CMS1_k127_3776522_3 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000001176 139.0
CMS1_k127_3776522_4 K -dependent Na Ca K07301 - - 0.0000000000000000000000000001257 127.0
CMS1_k127_3776522_5 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000005383 114.0
CMS1_k127_3789325_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 2.458e-204 642.0
CMS1_k127_3789325_1 PFAM penicillin-binding protein transpeptidase K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 464.0
CMS1_k127_3789325_2 Belongs to the alpha-IPM synthase homocitrate synthase family K01666 - 4.1.3.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 432.0
CMS1_k127_3789325_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000000000000000003081 234.0
CMS1_k127_3789325_4 Ferritin-like domain K02217 - 1.16.3.2 0.00000000000000000000000000000000000009215 148.0
CMS1_k127_3789325_5 PBS lyase HEAT domain protein repeat-containing protein - - - 0.0000000000000001165 94.0
CMS1_k127_3798569_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 3.372e-235 738.0
CMS1_k127_3798569_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000659 518.0
CMS1_k127_3798569_10 adenylate kinase K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000001373 235.0
CMS1_k127_3798569_11 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000001525 184.0
CMS1_k127_3798569_12 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000009229 159.0
CMS1_k127_3798569_13 Ribosomal protein L17 K02879 - - 0.0000000000000000000000000000000000000007319 153.0
CMS1_k127_3798569_14 Chemotaxis phosphatase CheX K03409 - - 0.000000000000000000000000003896 117.0
CMS1_k127_3798569_15 Histidine kinase - - - 0.0000000000001028 74.0
CMS1_k127_3798569_16 - - - - 0.0000000002799 64.0
CMS1_k127_3798569_2 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009846 476.0
CMS1_k127_3798569_3 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000902 430.0
CMS1_k127_3798569_4 Carbon-nitrogen hydrolase K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006853 405.0
CMS1_k127_3798569_5 Metallopeptidase family M24 K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 314.0
CMS1_k127_3798569_6 beta-lactamase K01467 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000266 298.0
CMS1_k127_3798569_7 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006816 285.0
CMS1_k127_3798569_8 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001865 284.0
CMS1_k127_3798569_9 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000000000000000000001199 232.0
CMS1_k127_3801854_0 PFAM ATPase associated with various cellular activities K09882 - 6.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 431.0
CMS1_k127_3801854_1 protein, GvpL GvpF - - - 0.000000000000000000000000000000000000001399 152.0
CMS1_k127_3801854_2 - - - - 0.0000000000002427 71.0
CMS1_k127_3801854_3 - - - - 0.0000000034 62.0
CMS1_k127_3802303_0 macromolecule localization K01421,K01992,K09690 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003828 386.0
CMS1_k127_3802303_1 2OG-Fe(II) oxygenase superfamily K07394 - - 0.00000000000000000000000000000000000000000000000000000000000000136 222.0
CMS1_k127_3802303_2 RNA recognition motif - - - 0.00000000000000000000000000000000000000000001055 168.0
CMS1_k127_3802303_3 2OG-Fe(II) oxygenase superfamily - - - 0.0001291 46.0
CMS1_k127_3805386_0 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K13642 - - 0.000000000000000000000000000000000000000000000000000000000000000001383 234.0
CMS1_k127_3805386_1 TIGRFAM cysteine-rich repeat protein - - - 0.000000000000000001931 93.0
CMS1_k127_3805386_2 SH3 domain (SH3b1 type) - - - 0.00000007674 53.0
CMS1_k127_3813258_0 N-acetylmuramoyl-L-alanine amidase, family 2 - - - 0.000000000000000000000000000004236 131.0
CMS1_k127_3813258_1 Belongs to the N(4) N(6)-methyltransferase family - - - 0.000000000000005486 76.0
CMS1_k127_3813258_2 - - - - 0.000005548 51.0
CMS1_k127_3824160_0 Non-ribosomal peptide synthetase modules and related - - - 8.326e-319 1026.0
CMS1_k127_3824160_1 PEP-utilising enzyme, TIM barrel domain K01006 - 2.7.9.1 0.000000000000000000006691 92.0
CMS1_k127_3826775_0 PFAM Orn DAP Arg decarboxylase 2 K01585 - 4.1.1.19 0.0 1011.0
CMS1_k127_3826775_1 Saccharopine dehydrogenase C-terminal domain K00290 - 1.5.1.7 2.727e-227 707.0
CMS1_k127_3826775_10 GntR family transcriptional regulator K02103 - - 0.00000000001845 77.0
CMS1_k127_3826775_2 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 5.99e-212 679.0
CMS1_k127_3826775_3 Belongs to the Orn Lys Arg decarboxylase class-II family. NspC subfamily K13747 - 4.1.1.96 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004068 443.0
CMS1_k127_3826775_4 Arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 347.0
CMS1_k127_3826775_5 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 307.0
CMS1_k127_3826775_6 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000163 255.0
CMS1_k127_3826775_7 N-acetylglucosaminylinositol deacetylase activity - - - 0.000000000000000000000000000000000000000000000000000000000000006717 225.0
CMS1_k127_3826775_8 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000006655 186.0
CMS1_k127_3826775_9 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000003412 176.0
CMS1_k127_3829376_0 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002918 270.0
CMS1_k127_3835248_0 PFAM glycoside hydrolase family 3 K05349 - 3.2.1.21 1.644e-234 752.0
CMS1_k127_3835248_1 dienelactone hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 307.0
CMS1_k127_3835248_2 - - - - 0.000000000000000000000000000000002594 133.0
CMS1_k127_3835248_3 WD40-like Beta Propeller - - - 0.00000000000000000000000000002217 130.0
CMS1_k127_3835248_4 - - - - 0.0000000000000001257 82.0
CMS1_k127_3835248_5 peptidase activity K01992 - - 0.0000000000004551 72.0
CMS1_k127_3835248_6 Restriction endonuclease - - - 0.0002582 46.0
CMS1_k127_3842138_0 PFAM Type II secretion system protein E K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002295 287.0
CMS1_k127_3842138_1 twitching motility protein K02669 - - 0.00000000000004329 74.0
CMS1_k127_3852905_0 Bacterial extracellular solute-binding proteins, family 5 Middle K13893 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000459 564.0
CMS1_k127_3852905_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007032 508.0
CMS1_k127_3852905_10 - - - - 0.000000000000000000000000000000000000000008313 160.0
CMS1_k127_3852905_11 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000625 158.0
CMS1_k127_3852905_12 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.0000000000000000000000000000000000000001424 155.0
CMS1_k127_3852905_13 TatD related DNase K03424 - - 0.0000000000000000000000000000000001754 142.0
CMS1_k127_3852905_14 - - - - 0.000000000000000000000000000002616 130.0
CMS1_k127_3852905_15 Domain of unknown function (DUF4422) - - - 0.0000000000000000000000000002027 124.0
CMS1_k127_3852905_16 type IV pilus modification protein PilV K02671,K02681 - - 0.000000384 58.0
CMS1_k127_3852905_2 Glycoside hydrolase family 44 K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 459.0
CMS1_k127_3852905_3 MFS_1 like family K03291 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 441.0
CMS1_k127_3852905_4 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006135 438.0
CMS1_k127_3852905_5 Pilus assembly protein PilX - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 436.0
CMS1_k127_3852905_6 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 393.0
CMS1_k127_3852905_7 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005599 351.0
CMS1_k127_3852905_8 HDOD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 306.0
CMS1_k127_3852905_9 Oligopeptide/dipeptide transporter, C-terminal region K02032 - - 0.0000000000000000000000000000000000000000000008447 169.0
CMS1_k127_3888_0 Elongator protein 3, MiaB family, Radical SAM K06139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003791 287.0
CMS1_k127_3890175_0 Belongs to the 'phage' integrase family - - - 0.00000000001634 76.0
CMS1_k127_3890175_1 Helix-turn-helix domain - - - 0.0000002875 54.0
CMS1_k127_3915811_0 SNF2 family N-terminal domain - - - 2.894e-256 823.0
CMS1_k127_3915811_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01874 - 6.1.1.10 2.345e-217 685.0
CMS1_k127_3915811_10 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000396 285.0
CMS1_k127_3915811_11 Protein of unknown function (DUF418) K07148 - - 0.0000000000000000000000000000000000000000000000000000000000000000003826 245.0
CMS1_k127_3915811_12 Domain of unknown function (DUF4465) - - - 0.00000000000000000000000000000000000000000000000000000000000000008669 234.0
CMS1_k127_3915811_13 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000002431 162.0
CMS1_k127_3915811_14 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000006184 143.0
CMS1_k127_3915811_15 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000000001823 148.0
CMS1_k127_3915811_16 Domain of unknown function (DUF4465) - - - 0.000000000000000000000000000002872 136.0
CMS1_k127_3915811_17 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000001489 134.0
CMS1_k127_3915811_18 - - - - 0.0000000000000000000000000001842 128.0
CMS1_k127_3915811_19 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.00000000000000000000002146 104.0
CMS1_k127_3915811_2 PFAM Stage II sporulation E family protein K01079,K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007386 514.0
CMS1_k127_3915811_20 Protein of unknown function (DUF2726) - - - 0.0000000000000000000008677 104.0
CMS1_k127_3915811_21 - - - - 0.00000000000332 70.0
CMS1_k127_3915811_22 antisigma factor binding K04749 - - 0.0000001387 57.0
CMS1_k127_3915811_23 Involved in the TonB-independent uptake of proteins K03641 - - 0.0008114 52.0
CMS1_k127_3915811_24 PFAM Peptidase M22, glycoprotease K14742 - - 0.000888 49.0
CMS1_k127_3915811_3 Amino acid permease K16238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 490.0
CMS1_k127_3915811_4 Binding-protein-dependent transport system inner membrane component K15581 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008792 377.0
CMS1_k127_3915811_5 Isochorismate synthase K02552 - 5.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009442 385.0
CMS1_k127_3915811_6 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596 360.0
CMS1_k127_3915811_7 ABC transporter substrate binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009722 380.0
CMS1_k127_3915811_8 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008996 344.0
CMS1_k127_3915811_9 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 336.0
CMS1_k127_3944589_0 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000004911 203.0
CMS1_k127_3944589_1 histidine kinase A domain protein - - - 0.000000000000000000000000000000002383 133.0
CMS1_k127_3944589_2 YCII-related domain - - - 0.0000000000000000000000005871 106.0
CMS1_k127_3944589_3 general secretion pathway protein - - - 0.000000000000000000001289 100.0
CMS1_k127_3981735_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009714 534.0
CMS1_k127_3981735_1 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005907 439.0
CMS1_k127_3981735_2 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K03772,K03773 - 5.2.1.8 0.0000000000000000000000002876 111.0
CMS1_k127_3987183_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 458.0
CMS1_k127_3987183_1 PEGA domain - - - 0.00000000000000000002296 107.0
CMS1_k127_3987183_2 Type II secretion system (T2SS), protein F - - - 0.00000000000000000004652 97.0
CMS1_k127_3987413_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 414.0
CMS1_k127_3987413_1 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000573 372.0
CMS1_k127_3987413_2 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006069 323.0
CMS1_k127_3987413_3 RmuC family - - - 0.0000000000000000000000000000000000000000000000006744 189.0
CMS1_k127_3987413_4 HlyD family secretion protein K02005 - - 0.0000000000000000000000000000000000000005868 155.0
CMS1_k127_3987413_5 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000006722 141.0
CMS1_k127_3987413_6 - - - - 0.0000001431 60.0
CMS1_k127_4031235_0 Protein of unknown function (DUF1593) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 579.0
CMS1_k127_4031235_1 Pectate lyase K01728 - 4.2.2.2 0.000000003166 59.0
CMS1_k127_4038350_0 potassium channel beta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004852 388.0
CMS1_k127_4038350_1 Radical SAM domain protein K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000005458 216.0
CMS1_k127_4038350_2 3'-5' exonuclease - - - 0.0000000000000000000000000000000000000000000000000000000254 203.0
CMS1_k127_4038350_3 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000000000000000000000000000000002475 160.0
CMS1_k127_4038350_4 SNF2 family N-terminal domain - - - 0.000000000000000000000000000000000003577 147.0
CMS1_k127_4038350_5 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000000003556 107.0
CMS1_k127_4038350_6 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07669 - - 0.000001108 61.0
CMS1_k127_4042725_0 Succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 4e-323 998.0
CMS1_k127_4042725_1 lyase activity K11645 GO:0003674,GO:0003824,GO:0004332,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016829,GO:0016830,GO:0016832,GO:0042802,GO:0044424,GO:0044444,GO:0044464 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004509 535.0
CMS1_k127_4042725_2 Fructose-1,6-bisphosphate aldolase, class II K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003472 516.0
CMS1_k127_4042725_3 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005431 363.0
CMS1_k127_4042725_4 TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 - - 0.00000000000000000000000000000000000000000000000003195 188.0
CMS1_k127_4042725_5 Thioesterase K07107,K18014 - 4.3.1.14 0.000000000000000000007248 100.0
CMS1_k127_4042725_6 AMP-binding enzyme K00666 - - 0.0007555 45.0
CMS1_k127_4066314_0 Penicillin binding protein transpeptidase domain K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 554.0
CMS1_k127_4066314_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 530.0
CMS1_k127_4066314_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 450.0
CMS1_k127_4066314_3 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000796 309.0
CMS1_k127_4066314_4 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 314.0
CMS1_k127_4066314_5 S4 RNA-binding domain K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005524 289.0
CMS1_k127_4066314_6 Belongs to the MraZ family K03925 - - 0.00000000000000000000000001042 114.0
CMS1_k127_4066314_7 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000001055 105.0
CMS1_k127_4066314_8 - - - - 0.0002033 49.0
CMS1_k127_4071130_0 COG1596 Periplasmic protein involved in polysaccharide export K01991 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007786 610.0
CMS1_k127_4071130_1 lipopolysaccharide biosynthesis protein - - - 0.000000000000000000000000266 117.0
CMS1_k127_4079995_0 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 394.0
CMS1_k127_4079995_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000946 372.0
CMS1_k127_4079995_2 Protein of unknown function (DUF1009) K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 319.0
CMS1_k127_4079995_3 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001358 289.0
CMS1_k127_4079995_4 ATPases associated with a variety of cellular activities K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000004752 248.0
CMS1_k127_4079995_5 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000001485 186.0
CMS1_k127_4079995_6 Single-stranded DNA-binding protein K03111 - - 0.0000000000000000000000000000000000002457 141.0
CMS1_k127_4079995_7 Ribosomal protein S6 K02990 - - 0.000000000000001636 79.0
CMS1_k127_4082999_0 FGGY family of carbohydrate kinases, C-terminal domain - - - 5.82e-246 773.0
CMS1_k127_4082999_1 Catalyzes the conversion of L-arabinose to L-ribulose K01804 - 5.3.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009183 576.0
CMS1_k127_4082999_2 Bacterial regulatory proteins, lacI family - - - 0.0000000000000000000000000000000001702 136.0
CMS1_k127_4087586_0 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003578 419.0
CMS1_k127_4087586_1 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001079 249.0
CMS1_k127_4087586_2 PFAM Metal-dependent hydrolase HDOD - - - 0.0000000006086 64.0
CMS1_k127_4090306_0 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 368.0
CMS1_k127_4090306_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005787 347.0
CMS1_k127_4096428_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 550.0
CMS1_k127_4096428_1 7TM receptor with intracellular HD hydrolase K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 538.0
CMS1_k127_4096428_10 PFAM flagellar FlbT family protein K06601 - - 0.0000000000000000000000000000000001493 136.0
CMS1_k127_4096428_11 Flagellar protein FlaF K06602 - - 0.0000000000000000000000000000002217 127.0
CMS1_k127_4096428_12 PFAM flagellin domain protein - - - 0.000000000000000000000000002439 127.0
CMS1_k127_4096428_2 PhoH-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000906 371.0
CMS1_k127_4096428_3 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 326.0
CMS1_k127_4096428_4 repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007535 342.0
CMS1_k127_4096428_5 HIT domain K19710 - 2.7.7.53 0.000000000000000000000000000000000000000000000000000001026 197.0
CMS1_k127_4096428_6 ERAD pathway - - - 0.0000000000000000000000000000000000000000000000000003746 194.0
CMS1_k127_4096428_7 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000000000000000000007652 150.0
CMS1_k127_4096428_8 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000124 159.0
CMS1_k127_4096428_9 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.0000000000000000000000000000000001173 141.0
CMS1_k127_4127088_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582 GO:0000166,GO:0000724,GO:0000725,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008854,GO:0009314,GO:0009338,GO:0009628,GO:0009987,GO:0015616,GO:0016043,GO:0016462,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017076,GO:0017111,GO:0030554,GO:0032392,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044355,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0099046,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1902494 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008274 551.0
CMS1_k127_4127088_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 0.0000000000000000000000000000000000000000000000000009535 199.0
CMS1_k127_4131866_0 Armadillo/beta-catenin-like repeats - - - 0.0007383 52.0
CMS1_k127_4146743_0 denitrification pathway K02569,K03532,K15876 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 402.0
CMS1_k127_4146743_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000634 377.0
CMS1_k127_4146743_2 Mo-molybdopterin cofactor metabolic process K03750,K03753,K13818 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 2.10.1.1,2.7.7.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002914 270.0
CMS1_k127_4146743_3 macromolecule localization K01421,K01992,K09690 - - 0.0000000000000000000000000004126 114.0
CMS1_k127_4152945_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006625 594.0
CMS1_k127_4152945_1 phosphorelay signal transduction system - - - 0.000000000000000000000000000005942 130.0
CMS1_k127_4193944_0 3-beta hydroxysteroid dehydrogenase/isomerase family K08678 - 4.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006495 497.0
CMS1_k127_4193944_1 PFAM Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000006536 199.0
CMS1_k127_4193944_2 - - - - 0.000000000000000000000000000000000000000000003596 181.0
CMS1_k127_4193944_3 Protein of unknown function, DUF481 - - - 0.00000327 59.0
CMS1_k127_4196274_0 cation diffusion facilitator family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007569 398.0
CMS1_k127_4196274_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 373.0
CMS1_k127_4196274_2 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009429 372.0
CMS1_k127_4196274_3 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000009695 256.0
CMS1_k127_4196274_4 ribonuclease III activity - - - 0.0000000000000000000002 100.0
CMS1_k127_4196274_5 DNA polymerase alpha chain like domain K02337 - 2.7.7.7 0.00000000000013 77.0
CMS1_k127_4200174_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001522 254.0
CMS1_k127_4200174_1 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000008364 181.0
CMS1_k127_4200174_2 - - - - 0.00000000002129 67.0
CMS1_k127_4200174_3 Transposase K07484 - - 0.00001389 54.0
CMS1_k127_4203663_0 PFAM Stem cell self-renewal protein Piwi - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 299.0
CMS1_k127_4203663_1 Putative ATP-dependent DNA helicase recG C-terminal K03655 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000006323 268.0
CMS1_k127_4227278_0 Multidrug ABC transporter ATP-binding protein K01990 - - 3.588e-222 703.0
CMS1_k127_4227278_1 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006166 439.0
CMS1_k127_4227278_2 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002117 398.0
CMS1_k127_4227278_3 Outer membrane efflux protein K18139 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 385.0
CMS1_k127_4227278_4 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 346.0
CMS1_k127_4227278_5 PFAM secretion protein HlyD family protein K01993,K16922 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009962 312.0
CMS1_k127_4227278_6 Histidine biosynthesis protein K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 288.0
CMS1_k127_4227278_7 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000001981 130.0
CMS1_k127_4231459_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1393.0
CMS1_k127_4231459_1 hydroxylamine reductase activity K00380 - 1.8.1.2 0.00000000000000000000000000000001882 129.0
CMS1_k127_4243748_0 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001201 273.0
CMS1_k127_4243748_1 FtsX-like permease family K02004 - - 0.000000000000000181 81.0
CMS1_k127_4243748_2 Bacterial transcriptional activator domain - - - 0.000000926 60.0
CMS1_k127_4243748_3 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.0004736 42.0
CMS1_k127_4307839_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001683 492.0
CMS1_k127_4307839_1 Outer membrane protein transport protein (OMPP1/FadL/TodX) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006196 359.0
CMS1_k127_4307839_2 Uroporphyrinogen-III synthase HemD K13542 - 2.1.1.107,4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000004313 263.0
CMS1_k127_4307839_3 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000398 254.0
CMS1_k127_4307839_4 ACT domain K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000002744 206.0
CMS1_k127_4307839_5 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000001658 179.0
CMS1_k127_4307839_6 - - - - 0.000000000003386 74.0
CMS1_k127_4307839_7 - - - - 0.0001071 44.0
CMS1_k127_4307839_8 Putative bacterial lipoprotein (DUF799) - - - 0.0001761 52.0
CMS1_k127_4352268_0 MgsA AAA+ ATPase C terminal K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009281 557.0
CMS1_k127_4352268_1 Response regulator receiver - - - 0.000000000000000000000003515 107.0
CMS1_k127_4357170_0 PFAM AMP-dependent synthetase and ligase K01895 - 6.2.1.1 2.01e-199 629.0
CMS1_k127_4357170_1 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000003099 147.0
CMS1_k127_4357170_2 NfeD-like C-terminal, partner-binding - - - 0.0000000000000007687 85.0
CMS1_k127_4377239_0 PFAM Xylose isomerase domain protein TIM barrel - - - 5.166e-199 628.0
CMS1_k127_4377239_1 Belongs to the glycosyl hydrolase 31 family K01811 - 3.2.1.177 7.668e-197 626.0
CMS1_k127_4377239_2 PFAM carbohydrate kinase K00854 - 2.7.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 571.0
CMS1_k127_4377239_3 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004857 322.0
CMS1_k127_4377239_4 FeS assembly SUF system protein SufT - - - 0.00000000000000000000000000000000000000000000000000003898 192.0
CMS1_k127_4377239_5 COG0577 ABC-type antimicrobial peptide transport system permease component - - - 0.00000000000000000000000000000004267 136.0
CMS1_k127_4377239_6 Protein of unknown function (DUF971) - - - 0.00000000000000000000000000002631 121.0
CMS1_k127_4377239_7 FR47-like protein - - - 0.000000000001661 74.0
CMS1_k127_4381963_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 541.0
CMS1_k127_4381963_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 326.0
CMS1_k127_4381963_2 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00658 - 2.3.1.61 0.000000000000000001861 89.0
CMS1_k127_4424412_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003902 319.0
CMS1_k127_4424412_1 LytTr DNA-binding domain K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005143 256.0
CMS1_k127_4424412_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000001483 203.0
CMS1_k127_443467_0 Outer membrane receptor proteins mostly Fe transport - - - 2.501e-318 991.0
CMS1_k127_443467_1 serine threonine protein kinase K08884,K12132 - 2.7.11.1 2.109e-233 745.0
CMS1_k127_443467_2 Na melibiose symporter and related transporters - - - 2.246e-203 642.0
CMS1_k127_443467_3 Glycosyl hydrolases family 43 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 476.0
CMS1_k127_443467_4 Belongs to the glycosyl hydrolase 43 family K06113 - 3.2.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005928 391.0
CMS1_k127_443467_5 DNA-templated transcription, initiation K02405 - - 0.0000000000000000000000000000000000000000000000000000000000001566 218.0
CMS1_k127_4461567_0 Heat shock 70 kDa protein K04043 - - 4.559e-225 708.0
CMS1_k127_4461567_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 523.0
CMS1_k127_4461567_10 - - - - 0.000000000000000000327 88.0
CMS1_k127_4461567_11 - - - - 0.00000000000000001785 85.0
CMS1_k127_4461567_13 - - - - 0.000000000001937 69.0
CMS1_k127_4461567_14 - - - - 0.0000000004406 60.0
CMS1_k127_4461567_17 - - - - 0.0006911 42.0
CMS1_k127_4461567_2 TIGRFAM Ammonium transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004036 520.0
CMS1_k127_4461567_3 TIGRFAM sulfate ABC transporter, periplasmic sulfate-binding protein K02048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 437.0
CMS1_k127_4461567_4 Sulfate ABC transporter inner membrane subunit CysT K02046 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008915 372.0
CMS1_k127_4461567_5 Binding-protein-dependent transport system inner membrane component K02047 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009964 371.0
CMS1_k127_4461567_6 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 377.0
CMS1_k127_4461567_7 Phosphate-selective porin O and P K07221 - - 0.0000000000000000000000000000000000000000000000000000000000000739 231.0
CMS1_k127_4461567_8 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000005762 200.0
CMS1_k127_4461567_9 Nitrogen regulatory protein P-II - - - 0.00000000000000000000000000000000000000000000000000002448 189.0
CMS1_k127_4468479_0 UTP--glucose-1-phosphate uridylyltransferase K00972,K12447 - 2.7.7.23,2.7.7.64,2.7.7.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 550.0
CMS1_k127_4468479_1 Belongs to the peptidase M16 family K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001144 279.0
CMS1_k127_4520222_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008758 440.0
CMS1_k127_4520222_1 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 326.0
CMS1_k127_4520222_10 protein conserved in bacteria K09803 - - 0.00000000000000000000000000001202 121.0
CMS1_k127_4520222_11 CopG antitoxin of type II toxin-antitoxin system - - - 0.00000000000000005979 84.0
CMS1_k127_4520222_12 - - - - 0.000000004149 59.0
CMS1_k127_4520222_2 Two component transcriptional regulator, winged helix family K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000926 303.0
CMS1_k127_4520222_3 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 306.0
CMS1_k127_4520222_4 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.00000000000000000000000000000000000000000000000000000000000003265 219.0
CMS1_k127_4520222_5 pfam abc - - - 0.0000000000000000000000000000000000000000000000000009009 186.0
CMS1_k127_4520222_6 protein domain associated with - - - 0.00000000000000000000000000000000000000002286 158.0
CMS1_k127_4520222_7 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000004545 139.0
CMS1_k127_4520222_8 - - - - 0.00000000000000000000000000000001098 134.0
CMS1_k127_4520222_9 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000001339 130.0
CMS1_k127_4540030_0 Receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007973 435.0
CMS1_k127_4540030_1 CBS domain containing protein K07182 - - 0.0000000000000000000000000000001134 130.0
CMS1_k127_4540030_2 EXOIII K02342 - 2.7.7.7 0.0000000000000000000000000000007056 130.0
CMS1_k127_4541847_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005722 431.0
CMS1_k127_4541847_1 COG2804 Type II secretory pathway ATPase PulE Tfp pilus assembly pathway ATPase PilB K02454,K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 424.0
CMS1_k127_4541847_10 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000003774 72.0
CMS1_k127_4541847_11 - - - - 0.00000000003973 73.0
CMS1_k127_4541847_14 COG1459 Type II secretory pathway, component PulF K02455 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0016020,GO:0032940,GO:0033036,GO:0042886,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098776 - 0.0006429 45.0
CMS1_k127_4541847_2 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005837 377.0
CMS1_k127_4541847_3 Type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 376.0
CMS1_k127_4541847_4 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 286.0
CMS1_k127_4541847_5 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004416 275.0
CMS1_k127_4541847_6 Type II secretion system (T2SS), protein K K02460 - - 0.0000000000000000000000000002468 128.0
CMS1_k127_4541847_7 Pilus assembly protein - - - 0.000000000000000000001178 108.0
CMS1_k127_4541847_8 General secretion pathway protein - - - 0.00000000000000000001373 103.0
CMS1_k127_4541847_9 Prokaryotic N-terminal methylation motif K02458 - - 0.00000000000000003984 89.0
CMS1_k127_4547432_0 Threonine synthase K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005634 565.0
CMS1_k127_4547432_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005988 548.0
CMS1_k127_4547432_2 PFAM Homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006982 416.0
CMS1_k127_4547432_3 - - - - 0.000000000000000000000000001182 126.0
CMS1_k127_4547432_4 Nitroreductase family - - - 0.00000000000000000000008456 101.0
CMS1_k127_4585941_0 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011 331.0
CMS1_k127_4585941_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000761 233.0
CMS1_k127_4585941_2 Sigma-70 region 3 K02405 - - 0.0000000000000000000000000000000000000000000000000000001248 203.0
CMS1_k127_4585941_3 acetyltransferase K03824 - - 0.0000000000000000000000000000000000000000000009009 170.0
CMS1_k127_4585941_4 Sigma-70, region 4 - - - 0.000000000000000000000000000000000000000000005305 171.0
CMS1_k127_4585941_5 Glyoxalase-like domain - - - 0.0000000000000000000000000000001179 130.0
CMS1_k127_4585941_6 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000002845 102.0
CMS1_k127_4585941_7 Acyl-ACP thioesterase K01071 - 3.1.2.21 0.0000008636 54.0
CMS1_k127_4587895_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 510.0
CMS1_k127_4587895_1 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000004311 205.0
CMS1_k127_4587895_2 Histidine kinase K07637,K07638,K07717 - 2.7.13.3 0.00000000000000000000000000000000000000000000008793 186.0
CMS1_k127_458923_0 Belongs to the peptidase M16 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 458.0
CMS1_k127_458923_1 DUF218 domain - - - 0.000000000000000001945 94.0
CMS1_k127_458923_2 Glutaredoxin-like domain (DUF836) - - - 0.000000000000000002559 87.0
CMS1_k127_458923_3 - - - - 0.0007563 48.0
CMS1_k127_4593149_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 468.0
CMS1_k127_4593149_1 Rhamnogalacturonan lyase B, N-terminal K18195 - 4.2.2.23 0.0000000000000000000000000000000000000000000004992 177.0
CMS1_k127_4593149_2 Glycosyltransferase like family 2 K20534 - - 0.00000000000000000000000000005865 125.0
CMS1_k127_4593149_3 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000006751 76.0
CMS1_k127_4626043_0 Peptidase M56 - - - 0.0000000000000000000000000000000000000000000000000000000000001472 228.0
CMS1_k127_4626043_1 PAP2 superfamily - - - 0.00000000000000000000000000001157 131.0
CMS1_k127_4626060_0 - - - - 0.00000000119 60.0
CMS1_k127_4626060_1 - - - - 0.0000001764 57.0
CMS1_k127_4628566_0 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 552.0
CMS1_k127_4628566_1 YmdB-like protein K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 320.0
CMS1_k127_4628566_2 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 307.0
CMS1_k127_4628566_3 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000001287 172.0
CMS1_k127_4628566_4 Thioesterase K07107 - - 0.000000000000000000000000000000000059 138.0
CMS1_k127_4628566_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000001143 104.0
CMS1_k127_4652099_0 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001422 281.0
CMS1_k127_4652099_1 Protein of unknown function (DUF1348) K09958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006628 254.0
CMS1_k127_4652099_2 Pyridoxamine 5'-phosphate oxidase family protein K07006 - - 0.00000000000000000000000000000000000000000000000000000000001146 214.0
CMS1_k127_4652099_3 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000000000000006147 173.0
CMS1_k127_4652099_4 SBF-like CPA transporter family (DUF4137) K03453 - - 0.00000000000000000000000000000000000000000000006233 184.0
CMS1_k127_4652099_5 MarR family - - - 0.000000000000000000000000000000000000000002002 160.0
CMS1_k127_4652099_6 PFAM DoxX family protein K15977 - - 0.0000000000000000005219 91.0
CMS1_k127_4652099_7 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.0000003943 54.0
CMS1_k127_4652099_8 PFAM NmrA family protein - - - 0.0004132 43.0
CMS1_k127_4663087_0 lipolytic protein G-D-S-L family - GO:0000272,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006080,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010383,GO:0010391,GO:0010410,GO:0016052,GO:0016787,GO:0016788,GO:0017144,GO:0042737,GO:0043170,GO:0044036,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0045491,GO:0045493,GO:0046555,GO:0052689,GO:0071554,GO:0071704,GO:1901575,GO:2000884 - 0.00000000000000000000000000000000000000000000000000000000000000000000009191 254.0
CMS1_k127_4663087_1 lipolytic protein G-D-S-L family - GO:0000272,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006080,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010383,GO:0010391,GO:0010410,GO:0016052,GO:0016787,GO:0016788,GO:0017144,GO:0042737,GO:0043170,GO:0044036,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0045491,GO:0045493,GO:0046555,GO:0052689,GO:0071554,GO:0071704,GO:1901575,GO:2000884 - 0.00000000000000000000000000000000000000000000000000000000000000000002014 246.0
CMS1_k127_4663087_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.0000000000000000000000000001558 118.0
CMS1_k127_4665822_0 Oligopeptide/dipeptide transporter, C-terminal region K02032 - - 0.000000000000000000000000000000000000000000000000006566 184.0
CMS1_k127_4665822_1 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000001326 132.0
CMS1_k127_4676134_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005327 587.0
CMS1_k127_4676134_1 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005493 394.0
CMS1_k127_4676134_2 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004023 349.0
CMS1_k127_4676134_3 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000001487 185.0
CMS1_k127_4676134_4 peptidase - - - 0.0000000000000000000002232 109.0
CMS1_k127_4676134_5 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.0004308 46.0
CMS1_k127_4680747_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1169.0
CMS1_k127_4680747_1 4-alpha-glucanotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 533.0
CMS1_k127_4680747_2 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004392 423.0
CMS1_k127_4680747_3 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005362 419.0
CMS1_k127_4680747_4 PFAM peptidase S1 and S6 chymotrypsin Hap K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 398.0
CMS1_k127_4680747_5 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006428 291.0
CMS1_k127_4680747_6 rRNA methylase - - - 0.00000000000000000000000000000000000000000001516 168.0
CMS1_k127_4680747_7 PFAM Sulfate transporter antisigma-factor antagonist STAS - - - 0.00000000000000000000000000000000000005721 148.0
CMS1_k127_4701015_0 Periplasmic binding protein-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008596 391.0
CMS1_k127_4701015_1 Pseudouridine synthase - - - 0.0000000000000000000000000000000000000000000000009379 183.0
CMS1_k127_4701015_2 - - - - 0.0000000000000000001736 94.0
CMS1_k127_4719537_0 Aldo/keto reductase family K19265 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 467.0
CMS1_k127_4719537_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 382.0
CMS1_k127_4719537_2 peptidylprolyl isomerase K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000003142 270.0
CMS1_k127_4719537_3 PTS HPr component phosphorylation site K11189 - - 0.00000000000000000000000000000002574 128.0
CMS1_k127_4719537_4 Pregnancy-associated plasma protein-A - - - 0.00000004147 65.0
CMS1_k127_4733271_0 NADH-quinone oxidoreductase K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007001 522.0
CMS1_k127_4733271_1 PFAM response regulator receiver K02488,K02658,K03413 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007127 497.0
CMS1_k127_4733271_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 448.0
CMS1_k127_4733271_3 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 332.0
CMS1_k127_4733271_4 Sigma-70 region 3 K02405 - - 0.000000000000000000000000000000000000000000009686 171.0
CMS1_k127_4733271_5 Chemotaxis phosphatase CheX K03409 - - 0.000000000000000000000000000000000217 139.0
CMS1_k127_4749602_0 Type II secretion system K02653 - - 0.00000000000001068 83.0
CMS1_k127_4749602_1 Concanavalin A-like lectin/glucanases superfamily K12287 - - 0.000000894 63.0
CMS1_k127_4753803_0 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416,K02417 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009156 400.0
CMS1_k127_4753803_1 Plays a role in the flagellum-specific transport system K02419 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003549 267.0
CMS1_k127_4753803_2 Type III flagellar switch regulator (C-ring) FliN C-term K02417 - - 0.0000000000000000000000000000000003092 134.0
CMS1_k127_4753803_3 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.00000000000000000000002418 104.0
CMS1_k127_4753803_4 Flagellar biosynthesis protein, FliO K02418 - - 0.00000006991 61.0
CMS1_k127_477326_0 COG0457 FOG TPR repeat - - - 0.000007611 55.0
CMS1_k127_4783717_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1029.0
CMS1_k127_4783717_1 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 4.729e-248 780.0
CMS1_k127_4783717_10 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000002778 205.0
CMS1_k127_4783717_11 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.0000000000000000000000000000000000000000000000000000001718 197.0
CMS1_k127_4783717_12 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000006719 192.0
CMS1_k127_4783717_13 Involved in the binding of tRNA to the ribosomes K02946 - - 0.000000000000000000000000000000000000000000000000009888 183.0
CMS1_k127_4783717_14 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.00000000000000000000000000000000000000000000001494 172.0
CMS1_k127_4783717_15 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000000000000007428 169.0
CMS1_k127_4783717_16 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000001113 168.0
CMS1_k127_4783717_17 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000000000000000001214 162.0
CMS1_k127_4783717_18 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.0000000000000000000000000000000000000000004445 160.0
CMS1_k127_4783717_19 Binds to the 23S rRNA K02876 - - 0.0000000000000000000000000000000000000001178 156.0
CMS1_k127_4783717_2 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 341.0
CMS1_k127_4783717_20 4Fe-4S single cluster domain of Ferredoxin I K05337 - - 0.000000000000000000000000000000000012 139.0
CMS1_k127_4783717_21 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000006669 130.0
CMS1_k127_4783717_22 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000005643 126.0
CMS1_k127_4783717_23 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000000000007615 124.0
CMS1_k127_4783717_24 Ribosomal proteins 50S L24/mitochondrial 39S L24 K02895 - - 0.00000000000000000007515 91.0
CMS1_k127_4783717_25 Glutaredoxin K07390 - - 0.0000000000000000001713 92.0
CMS1_k127_4783717_26 Prokaryotic N-terminal methylation motif K02456,K02650,K02672 - - 0.000000000000000001125 86.0
CMS1_k127_4783717_27 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.000001229 52.0
CMS1_k127_4783717_28 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000007018 51.0
CMS1_k127_4783717_29 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.0008302 46.0
CMS1_k127_4783717_3 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006773 303.0
CMS1_k127_4783717_4 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003135 247.0
CMS1_k127_4783717_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.000000000000000000000000000000000000000000000000000000000000000000007374 236.0
CMS1_k127_4783717_6 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.000000000000000000000000000000000000000000000000000000000000000006884 233.0
CMS1_k127_4783717_7 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000000000000009946 222.0
CMS1_k127_4783717_8 Forms part of the polypeptide exit tunnel K02926 - - 0.00000000000000000000000000000000000000000000000000000000009976 211.0
CMS1_k127_4783717_9 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000007629 206.0
CMS1_k127_4814156_0 pfkB family carbohydrate kinase K00874 - 2.7.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002912 593.0
CMS1_k127_4814156_1 PFAM Glucuronate isomerase K01812 - 5.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006757 304.0
CMS1_k127_4814156_2 Catalyzes the dehydration of D-mannonate K01686 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005975,GO:0005996,GO:0006063,GO:0006064,GO:0006082,GO:0008150,GO:0008152,GO:0008198,GO:0008927,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019585,GO:0019752,GO:0030145,GO:0032787,GO:0042839,GO:0042840,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046872,GO:0046914,GO:0071704,GO:0072329,GO:1901575 4.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 294.0
CMS1_k127_4814156_3 KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.0000000000000000000000000000000000000000000000000000000000000004034 227.0
CMS1_k127_4814156_4 Putative esterase K07017 - - 0.000000000000000000000000000000000000000000000006555 190.0
CMS1_k127_4834182_0 Anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.0 1040.0
CMS1_k127_4834182_1 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009862 574.0
CMS1_k127_4834182_11 - - - - 0.0002964 44.0
CMS1_k127_4834182_12 Dodecin K09165 - - 0.0008692 46.0
CMS1_k127_4834182_13 Protein of unknown function (DUF1194) K07114 - - 0.0008731 44.0
CMS1_k127_4834182_2 tRNA (Guanine-1)-methyltransferase K00554 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 303.0
CMS1_k127_4834182_3 translation initiation factor activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002324 315.0
CMS1_k127_4834182_4 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001779 265.0
CMS1_k127_4834182_5 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007919 259.0
CMS1_k127_4834182_6 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000000000002871 172.0
CMS1_k127_4834182_7 Conserved hypothetical protein 95 - - - 0.00000000000000000000000000000000000000009208 157.0
CMS1_k127_4834182_8 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.00000000000000000000000001144 111.0
CMS1_k127_4834182_9 MlaD protein K02067 - - 0.00000000000000000000000013 118.0
CMS1_k127_4869869_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 4.645e-286 887.0
CMS1_k127_4869869_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0016020,GO:0016469,GO:0032991,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045259,GO:0045260,GO:0071944,GO:0098796,GO:0098797 3.6.3.14 3.196e-207 653.0
CMS1_k127_4869869_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 484.0
CMS1_k127_4869869_3 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006788 333.0
CMS1_k127_4869869_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002807 286.0
CMS1_k127_4869869_5 gluconolactonase K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002334 286.0
CMS1_k127_4869869_6 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000000000001056 119.0
CMS1_k127_4874653_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 601.0
CMS1_k127_4874653_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 284.0
CMS1_k127_4874653_2 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000365 287.0
CMS1_k127_4874653_3 mechanosensitive ion channel K16052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004981 265.0
CMS1_k127_4874653_4 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000855 72.0
CMS1_k127_4882400_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0030312,GO:0044237,GO:0044464,GO:0071944 - 3.987e-240 762.0
CMS1_k127_4882400_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 548.0
CMS1_k127_4882400_2 ATPases associated with a variety of cellular activities K05833 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 339.0
CMS1_k127_4882400_3 Belongs to the binding-protein-dependent transport system permease family K05832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 334.0
CMS1_k127_4882400_4 Histidine kinase-like ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004539 335.0
CMS1_k127_4882400_5 antisigma factor binding K04749,K04757 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000008277 231.0
CMS1_k127_4882400_6 COG3209 Rhs family protein - - - 0.0000000000000000000000000000000000000000000000000000000000002349 222.0
CMS1_k127_4882400_7 Ankyrin repeat K05643 - - 0.00000000000000000000000000000000000000000000000000000000001319 218.0
CMS1_k127_4882400_8 Belongs to the binding-protein-dependent transport system permease family K01989,K05832 - - 0.000000000000000000000000000000000000000000000000000000003125 228.0
CMS1_k127_4882400_9 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000007428 194.0
CMS1_k127_4891048_0 Glutathione S-transferase, C-terminal domain K00799,K11209 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007292 313.0
CMS1_k127_4891048_1 Glyoxalase bleomycin resistance protein dioxygenase K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000009834 184.0
CMS1_k127_4891048_2 PFAM sigma-54 factor interaction domain-containing protein K21405 - - 0.0000000000000000000000000000000000000189 149.0
CMS1_k127_4891048_3 Glutathione S-transferase, C-terminal domain - - - 0.00000000000000000000005642 101.0
CMS1_k127_4903755_0 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000003016 211.0
CMS1_k127_4910708_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K13598 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.13.3 1.863e-211 681.0
CMS1_k127_4910708_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K13599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002691 395.0
CMS1_k127_4910708_2 nitrogen regulation protein NR(I) K07712 - - 0.00000000000000000000000000000000000000002074 156.0
CMS1_k127_4926681_0 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004869 348.0
CMS1_k127_4926681_1 membrane-bound metal-dependent K07038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 313.0
CMS1_k127_4926681_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005567 305.0
CMS1_k127_4926681_3 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000001551 196.0
CMS1_k127_493985_0 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 432.0
CMS1_k127_493985_1 PFAM Pyrrolo-quinoline quinone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005727 422.0
CMS1_k127_493985_2 HlyD family secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 339.0
CMS1_k127_493985_3 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 312.0
CMS1_k127_493985_4 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001235 279.0
CMS1_k127_494381_0 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 454.0
CMS1_k127_494381_1 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000004046 187.0
CMS1_k127_494381_2 Beta-lactamase class C - - - 0.00000000000000000000000000000000000000005307 169.0
CMS1_k127_494381_3 Protein of unknown function (DUF3034) - - - 0.000000003315 61.0
CMS1_k127_4946942_0 - - - - 0.000000000000000000000000000000000000000000000000000002349 200.0
CMS1_k127_4946942_1 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.0000000000000000000000000000000000000000000000006316 184.0
CMS1_k127_4946942_2 Uncharacterized protein conserved in bacteria (DUF2239) K09965 - - 0.0000000000000000000000000000000000000003255 156.0
CMS1_k127_4946942_3 PFAM ROK family K00845,K00886 - 2.7.1.2,2.7.1.63 0.000000000000000003075 87.0
CMS1_k127_4949138_0 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 1.849e-226 720.0
CMS1_k127_4949138_1 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008607 312.0
CMS1_k127_4949138_2 Belongs to the TrpC family K01609 - 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006384 314.0
CMS1_k127_4949138_3 Belongs to the EutC family K03736 - 4.3.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004223 284.0
CMS1_k127_4949138_4 Nucleotide pyrophosphohydrolase K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000001234 207.0
CMS1_k127_4949138_5 PFAM Hemerythrin HHE cation binding domain protein K07216 - - 0.0000000000000000000000000006686 118.0
CMS1_k127_4950948_0 ABC transporter K15738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 606.0
CMS1_k127_4950948_1 Glycosyl hydrolase family 2, sugar binding domain protein K05970 - 3.1.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004523 485.0
CMS1_k127_4950948_10 PFAM GCN5-related N-acetyltransferase - - - 0.0004335 46.0
CMS1_k127_4950948_2 PFAM Aminotransferase, class I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 335.0
CMS1_k127_4950948_3 DnaJ molecular chaperone homology domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 303.0
CMS1_k127_4950948_4 NMT1/THI5 like K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001448 250.0
CMS1_k127_4950948_5 nucleotidyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000003753 243.0
CMS1_k127_4950948_6 PFAM Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000002906 223.0
CMS1_k127_4950948_7 PFAM flagellin domain protein - - - 0.000000000000000000000000000000008279 139.0
CMS1_k127_4950948_8 Thioredoxin-like - - - 0.0000000000000000000000000000003918 130.0
CMS1_k127_4950948_9 PFAM penicillin-binding protein transpeptidase K05515 - 3.4.16.4 0.0000000000000000000000002311 110.0
CMS1_k127_49836_0 DNA RNA non-specific endonuclease K01173 - - 0.0000000000000000000000000000000000000000005522 169.0
CMS1_k127_49836_1 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.000000000000000000000001654 105.0
CMS1_k127_5000931_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000003278 214.0
CMS1_k127_5000931_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000001954 175.0
CMS1_k127_5000931_2 Outer membrane efflux protein - - - 0.00006586 55.0
CMS1_k127_5002066_0 Belongs to the beta-ketoacyl-ACP synthases family K09458 - 2.3.1.179 1.383e-200 631.0
CMS1_k127_5002066_1 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 495.0
CMS1_k127_5002066_2 Pfam Glycosyl hydrolases family 39 K01198 - 3.2.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 476.0
CMS1_k127_5002066_3 Dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002844 235.0
CMS1_k127_5002066_4 Phosphopantetheine attachment site - - - 0.000000000000000000000000000000000006402 142.0
CMS1_k127_5002066_5 Belongs to the glycosyl hydrolase 31 family K01811 - 3.2.1.177 0.0000000000000000000000000006929 116.0
CMS1_k127_5037527_0 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005712 562.0
CMS1_k127_5037527_1 Outer membrane protein assembly complex, YaeT protein K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003331 475.0
CMS1_k127_5037527_2 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008203 439.0
CMS1_k127_5037527_3 dCMP deaminase K01493 - 3.5.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000958 248.0
CMS1_k127_5037527_4 SIS domain - - - 0.00000000000000000000000000000000000000000000000000000000000001156 224.0
CMS1_k127_5037527_5 Binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000000000000000003886 180.0
CMS1_k127_5037527_6 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000003321 134.0
CMS1_k127_5046488_0 CHAT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003098 270.0
CMS1_k127_5046488_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000003303 215.0
CMS1_k127_5046488_2 Tetratricopeptide repeat - - - 0.0000000000000000000002302 114.0
CMS1_k127_5046488_3 (belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family) - - - 0.00000000004207 72.0
CMS1_k127_5046488_4 VRR-NUC domain - - - 0.000002425 55.0
CMS1_k127_5049203_0 Glycosyl hydrolase family 3 N terminal domain K05349 - 3.2.1.21 1.63e-252 807.0
CMS1_k127_5049203_1 transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 393.0
CMS1_k127_5052837_0 Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 502.0
CMS1_k127_5052837_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03696 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 471.0
CMS1_k127_5063765_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18303 - - 9.408e-305 965.0
CMS1_k127_5063765_1 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 330.0
CMS1_k127_5063765_2 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000002032 205.0
CMS1_k127_5063765_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18302 - - 0.0000000000000000000000000008812 119.0
CMS1_k127_5095525_0 Carbamoyltransferase N-terminus K00612 - - 4.349e-244 767.0
CMS1_k127_5095525_1 Receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 597.0
CMS1_k127_5095525_11 - - - - 0.000001224 55.0
CMS1_k127_5095525_12 - - - - 0.00003051 52.0
CMS1_k127_5095525_2 lipolytic protein G-D-S-L family K00612 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009675 539.0
CMS1_k127_5095525_3 tail collar domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007417 349.0
CMS1_k127_5095525_4 Baseplate J-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001148 263.0
CMS1_k127_5095525_5 PFAM regulatory protein LacI K02529 - - 0.0000000000000000000000000000000000000000000000000000000001913 214.0
CMS1_k127_5095525_6 Tail protein - - - 0.000000000000000000000000000000000000000378 156.0
CMS1_k127_5095525_7 phage baseplate assembly protein V - - - 0.0000000000000000000000000000000005349 139.0
CMS1_k127_5095525_8 Baseplate assembly protein K06903 - - 0.000000000000000000000000003927 115.0
CMS1_k127_5095525_9 - - - - 0.00000000000000000000003512 106.0
CMS1_k127_5105207_0 alcohol dehydrogenase K00121 - 1.1.1.1,1.1.1.284 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005064 271.0
CMS1_k127_5105207_1 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001955 250.0
CMS1_k127_5105207_2 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000001092 133.0
CMS1_k127_5105679_0 Aminotransferase class I and II K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 328.0
CMS1_k127_5105679_1 polysaccharide catabolic process K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 329.0
CMS1_k127_5105679_2 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000006138 268.0
CMS1_k127_5105679_3 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004259 267.0
CMS1_k127_5105679_4 Metallophosphoesterase K07098 - - 0.000000000000000000000000000000000000000000000000000000000003456 220.0
CMS1_k127_5105679_5 Cytidylyltransferase family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000001926 210.0
CMS1_k127_5105679_6 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000000000264 194.0
CMS1_k127_5105679_7 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000000000000000000000000000005431 182.0
CMS1_k127_5105679_8 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000000000073 174.0
CMS1_k127_5105679_9 Bifunctional nuclease K08999 - - 0.0000000000000000000000000000000000000000407 159.0
CMS1_k127_5118532_0 AMP-dependent synthetase K05939 - 2.3.1.40,6.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 505.0
CMS1_k127_5118532_1 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004227 321.0
CMS1_k127_5118532_2 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000006202 208.0
CMS1_k127_5118532_3 polyphosphate glucokinase K00845,K00886 - 2.7.1.2,2.7.1.63 0.00000000000000000000000000000000000000001009 157.0
CMS1_k127_5118532_4 Abortive infection protein - - - 0.0000000000000000000000000000004036 130.0
CMS1_k127_5124060_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.00000000000000000000000000000000000000000000000000000001131 199.0
CMS1_k127_5125911_0 carboxylic ester hydrolase activity K03929 - - 7.579e-224 701.0
CMS1_k127_5125911_1 TIGRFAM geranylgeranyl reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007357 249.0
CMS1_k127_5125911_2 - - - - 0.00000000000000000000000000000000000000000005847 175.0
CMS1_k127_5125911_4 methyltransferase - - - 0.000007525 49.0
CMS1_k127_5125913_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 3.011e-219 693.0
CMS1_k127_5125913_1 Cellulase N-terminal ig-like domain K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008019 416.0
CMS1_k127_5125913_2 glycyl-tRNA aminoacylation - - - 0.00000000001261 65.0
CMS1_k127_5125913_3 - - - - 0.00002815 56.0
CMS1_k127_5134752_0 glutamate synthase, alpha subunit domain protein K00284 - 1.4.7.1 0.0 1990.0
CMS1_k127_5134752_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 1.248e-308 958.0
CMS1_k127_5134752_10 Flavin reductase like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000593 218.0
CMS1_k127_5134752_11 PFAM flagellin domain protein - - - 0.00000000000000000000000000000000000000000000000001504 193.0
CMS1_k127_5134752_12 Flavodoxin K00380 - 1.8.1.2 0.000000000000000000000000002239 120.0
CMS1_k127_5134752_13 Haemolytic K08998 - - 0.0000000000000000000000005558 106.0
CMS1_k127_5134752_14 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000007421 76.0
CMS1_k127_5134752_15 esterase - - - 0.0000000003991 60.0
CMS1_k127_5134752_16 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000007407 57.0
CMS1_k127_5134752_17 - - - - 0.0003696 50.0
CMS1_k127_5134752_2 Glutamate synthase K00266 - 1.4.1.13,1.4.1.14 3.364e-213 673.0
CMS1_k127_5134752_3 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 490.0
CMS1_k127_5134752_4 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006971 488.0
CMS1_k127_5134752_5 UPF0365 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 453.0
CMS1_k127_5134752_6 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009713 444.0
CMS1_k127_5134752_7 Belongs to the PdxA family K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 366.0
CMS1_k127_5134752_8 PFAM transferase hexapeptide repeat containing protein K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000008218 254.0
CMS1_k127_5134752_9 Putative neutral zinc metallopeptidase K06973 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003768 248.0
CMS1_k127_5137337_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 5.597e-256 799.0
CMS1_k127_5137337_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006896 413.0
CMS1_k127_5137337_2 integral membrane protein - - - 0.00000000000000000002279 104.0
CMS1_k127_5148074_0 Tail sheath protein K06907 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 427.0
CMS1_k127_5148074_1 Phage tail tube protein FII K06908 - - 0.000000000000000000000000000000000000005149 151.0
CMS1_k127_5148074_2 Phage tail assembly chaperone proteins, E, or 41 or 14 - - - 0.000000001856 61.0
CMS1_k127_5148074_3 phage tail tape measure protein - - - 0.0008902 49.0
CMS1_k127_5194095_0 Sodium:solute symporter family K03307 - - 1.648e-204 654.0
CMS1_k127_5194095_1 HELICc2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 580.0
CMS1_k127_5194095_2 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000008098 223.0
CMS1_k127_5196848_0 COG1335 Amidases related to nicotinamidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 402.0
CMS1_k127_5196848_1 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004077 305.0
CMS1_k127_5202808_0 PFAM NAD-dependent epimerase dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002766 368.0
CMS1_k127_5202808_1 Domain of unknown function (DUF4838) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008241 284.0
CMS1_k127_5202808_2 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000003155 178.0
CMS1_k127_5202808_4 transferase activity, transferring glycosyl groups - - - 0.00000000000000001325 93.0
CMS1_k127_5202808_5 Polysaccharide biosynthesis protein - - - 0.0000000000002961 82.0
CMS1_k127_5226249_0 glycoside hydrolase family 2 sugar binding - - - 9.732e-239 769.0
CMS1_k127_5226249_1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004981 497.0
CMS1_k127_5226249_2 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD K03581 - 3.1.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001172 290.0
CMS1_k127_523647_0 Hsp90 protein K04079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005067 491.0
CMS1_k127_523647_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003276 481.0
CMS1_k127_5292424_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000002474 254.0
CMS1_k127_5292424_1 Protein conserved in bacteria K09859 - - 0.0000000000000000000000000000000000000000000000000003382 204.0
CMS1_k127_5292424_10 Peptidoglycan-synthase activator LpoB K07337 - - 0.00002192 53.0
CMS1_k127_5292424_2 - - - - 0.000000000000000000000000000000000000000000000002475 196.0
CMS1_k127_5292424_3 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000003038 177.0
CMS1_k127_5292424_4 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.00000000000000000000000001012 117.0
CMS1_k127_5292424_5 - - - - 0.00000000000000000000001163 115.0
CMS1_k127_5292424_6 Hsp20/alpha crystallin family - - - 0.000000000000000000001319 98.0
CMS1_k127_5292424_7 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000006643 98.0
CMS1_k127_5292424_8 curli production assembly transport component CsgG - - - 0.000000000000006126 85.0
CMS1_k127_5292424_9 - - - - 0.000001517 61.0
CMS1_k127_5295650_1 - - - - 0.00000000000000000007824 95.0
CMS1_k127_5313759_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 432.0
CMS1_k127_5313759_1 PFAM Enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000000001112 236.0
CMS1_k127_5313759_2 Belongs to the amidase family K01426 - 3.5.1.4 0.0000000000000000000000000000000002704 134.0
CMS1_k127_5314703_0 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006942 372.0
CMS1_k127_5314703_1 Bacterial PH domain - - - 0.0000000000107 72.0
CMS1_k127_5350358_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009584 396.0
CMS1_k127_5350358_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 381.0
CMS1_k127_5350358_2 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000005977 253.0
CMS1_k127_5350358_3 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000002006 247.0
CMS1_k127_5350358_4 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component K00380 - 1.8.1.2 0.000000000000000000000000000000000000000000000000000000000000007574 229.0
CMS1_k127_5350358_5 PFAM isochorismatase hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000005426 215.0
CMS1_k127_5350358_6 Lipase (class 3) K01046 - 3.1.1.3 0.00000000000000000000005506 112.0
CMS1_k127_5350358_7 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component K00380 - 1.8.1.2 0.0004604 43.0
CMS1_k127_5376990_0 Cell wall formation - - - 4.698e-215 691.0
CMS1_k127_5376990_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007809 383.0
CMS1_k127_5376990_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 374.0
CMS1_k127_5376990_3 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 372.0
CMS1_k127_5376990_4 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 364.0
CMS1_k127_5376990_5 D-ala D-ala ligase N-terminus K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009302 274.0
CMS1_k127_5376990_6 Lysin motif - - - 0.000000000000000000000000000000000002029 152.0
CMS1_k127_5376990_7 Cell division protein FtsQ K03589 - - 0.0000000000000000000000000000003147 134.0
CMS1_k127_537733_0 Domain of unknown function (DUF5110) K01187 - 3.2.1.20 4.73e-257 811.0
CMS1_k127_537733_1 alpha-L-arabinofuranosidase domain protein K01209 - 3.2.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008897 582.0
CMS1_k127_537733_2 siderophore transport - - - 0.00000000000000000000000000000000000000000000000000000000000001279 223.0
CMS1_k127_537733_3 catabolite control protein A K05499 - - 0.000000000000000000000000000000000000000002145 169.0
CMS1_k127_5377806_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 537.0
CMS1_k127_5401250_0 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002766 282.0
CMS1_k127_5401386_0 lysine 2,3-aminomutase K01843 - 5.4.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003624 537.0
CMS1_k127_5401386_1 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 494.0
CMS1_k127_5401386_2 Phospholipase/Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000001092 180.0
CMS1_k127_5401386_3 - - - - 0.0000008647 57.0
CMS1_k127_5438095_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 7.377e-280 870.0
CMS1_k127_5438095_1 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006037 341.0
CMS1_k127_5438095_2 Belongs to the NadC ModD family K03813 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004206 315.0
CMS1_k127_5438095_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000006602 89.0
CMS1_k127_5438095_4 Heavy-metal resistance - - - 0.0000000000002886 75.0
CMS1_k127_5467386_0 PFAM magnesium chelatase ChlI subunit K07391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000445 551.0
CMS1_k127_5467386_1 Catalyzes the reversible epimerization of cellobiose to 4-O-beta-D-glucopyranosyl-D-mannose (Glc-Man) K16213 - 5.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 390.0
CMS1_k127_5467386_2 Thiamine monophosphate synthase K00788 - 2.5.1.3 0.000000000000000000000000000000000000000006131 162.0
CMS1_k127_5467386_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000006646 119.0
CMS1_k127_5467386_4 Asp23 family, cell envelope-related function - - - 0.00000000000000000005165 96.0
CMS1_k127_5467386_5 Peptidoglycan-synthase activator LpoB K07337 - - 0.00000000000004151 75.0
CMS1_k127_5467386_6 Protein of unknown function (DUF721) - - - 0.0000000000000871 75.0
CMS1_k127_5475722_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 446.0
CMS1_k127_5475722_1 MacB-like periplasmic core domain K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 378.0
CMS1_k127_5475722_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 284.0
CMS1_k127_5475722_3 PAS fold K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000005731 233.0
CMS1_k127_5475722_4 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000002907 145.0
CMS1_k127_5487107_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 4.48e-277 859.0
CMS1_k127_5487107_1 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000001192 141.0
CMS1_k127_5487107_2 Flagellar hook capping protein - N-terminal region K02389 GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009424,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588 - 0.000000000007962 67.0
CMS1_k127_5487107_3 isomerase K03770 - 5.2.1.8 0.0002903 52.0
CMS1_k127_5489374_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 4.614e-245 766.0
CMS1_k127_5489374_1 Polynucleotide adenylyltransferase K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 463.0
CMS1_k127_5489374_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 369.0
CMS1_k127_5489374_3 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000007719 243.0
CMS1_k127_5489374_4 KDPG and KHG aldolase - - - 0.000000000000000000000000000000000000000000000001247 181.0
CMS1_k127_5489374_6 Cation transport protein - - - 0.00000000000000003237 82.0
CMS1_k127_5489374_7 - - - - 0.0009772 47.0
CMS1_k127_5496117_0 oxidation-reduction process K09022 - 3.5.99.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 416.0
CMS1_k127_5496117_1 transport system periplasmic component - - - 0.000000000000000000000000000000000000000000000000000051 198.0
CMS1_k127_552492_0 COG2373 Large extracellular alpha-helical protein - - - 0.000007742 60.0
CMS1_k127_5527664_0 Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose K16212 - 2.4.1.281 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 533.0
CMS1_k127_5527664_1 UDP-galactopyranose mutase K01854 - 5.4.99.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 447.0
CMS1_k127_5527664_2 Polysaccharide pyruvyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000458 397.0
CMS1_k127_5527664_3 ABC transporter K11085 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 344.0
CMS1_k127_5527664_4 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000354 242.0
CMS1_k127_5527664_6 Protein of unknown function (DUF563) - - - 0.0000000000000001707 92.0
CMS1_k127_553209_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 497.0
CMS1_k127_553209_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 352.0
CMS1_k127_553209_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004658 341.0
CMS1_k127_553209_3 Mycolic acid cyclopropane synthetase - - - 0.00000000000000000000000000000000000000000000000000000002635 215.0
CMS1_k127_553209_4 Major facilitator Superfamily K06902 - - 0.00000000001031 77.0
CMS1_k127_553209_5 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 0.0000000004093 63.0
CMS1_k127_5547653_0 ABC transporter K09691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003089 399.0
CMS1_k127_5547653_1 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.00000000000000000000000000000005088 128.0
CMS1_k127_5547653_2 Bacterial PH domain - - - 0.0000000000000000000003773 105.0
CMS1_k127_5547653_3 - - - - 0.0000000000000001611 94.0
CMS1_k127_5547653_4 Glycosyl transferase family 2 - - - 0.0000000000003104 71.0
CMS1_k127_5547653_5 sequence-specific DNA binding - - - 0.000007061 56.0
CMS1_k127_5571993_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 5.745e-226 730.0
CMS1_k127_5571993_1 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 583.0
CMS1_k127_5571993_2 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005583 343.0
CMS1_k127_5571993_3 DHH family K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 332.0
CMS1_k127_5571993_4 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 298.0
CMS1_k127_5571993_5 Putative methyltransferase K03439 - 2.1.1.33 0.000000000000000000000000000000000000000000000008872 179.0
CMS1_k127_5571993_6 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000001094 107.0
CMS1_k127_5571993_7 - - - - 0.00000009592 61.0
CMS1_k127_5584831_0 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000001409 187.0
CMS1_k127_5593274_0 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.0 1137.0
CMS1_k127_5593274_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 3.681e-299 932.0
CMS1_k127_5593274_10 DNA methylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 346.0
CMS1_k127_5593274_11 Methyltransferase, chemotaxis proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000004146 225.0
CMS1_k127_5593274_12 PFAM chemotaxis sensory transducer K03406 - - 0.000000000000000000000000000000000000000000000000000000000000002411 239.0
CMS1_k127_5593274_13 PFAM Methyltransferase type 11 K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000001634 225.0
CMS1_k127_5593274_14 PFAM Haloacid dehalogenase domain protein hydrolase K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000001386 211.0
CMS1_k127_5593274_15 transmembrane signaling receptor activity K03406 - - 0.000000000000000000000000000000000000000000000000002625 205.0
CMS1_k127_5593274_16 COG NOG12539 non supervised orthologous group K09702 - - 0.0000000000000000000000000000000000000000000000003848 183.0
CMS1_k127_5593274_17 PFAM chemotaxis sensory transducer K03406 - - 0.000000000000000000000000000000000000000002311 177.0
CMS1_k127_5593274_18 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000009316 168.0
CMS1_k127_5593274_19 Glycine cleavage H-protein - - - 0.0000000000000000000000000001141 121.0
CMS1_k127_5593274_2 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 2.863e-229 719.0
CMS1_k127_5593274_20 DNA-binding transcription factor activity K21886,K21903 - - 0.000000000000004601 81.0
CMS1_k127_5593274_21 Oxaloacetate decarboxylase, gamma chain - - - 0.000005136 53.0
CMS1_k127_5593274_3 acetyl-CoA hydrolase - - - 9.157e-203 643.0
CMS1_k127_5593274_4 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 562.0
CMS1_k127_5593274_5 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 527.0
CMS1_k127_5593274_6 PFAM tRNA synthetase class II (G H P and S) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 510.0
CMS1_k127_5593274_7 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008038 413.0
CMS1_k127_5593274_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 421.0
CMS1_k127_5593274_9 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009772 393.0
CMS1_k127_5595819_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 1.096e-210 662.0
CMS1_k127_5595819_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 606.0
CMS1_k127_5595819_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003934 429.0
CMS1_k127_5595819_3 helix_turn_helix, arabinose operon control protein K13652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001148 268.0
CMS1_k127_5595819_4 PFAM FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000005822 218.0
CMS1_k127_5595819_5 Belongs to the CinA family K03742 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000001014 201.0
CMS1_k127_5595819_6 helix_turn_helix, arabinose operon control protein K13652 - - 0.0000000000000000001425 97.0
CMS1_k127_5598297_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 1.29e-242 758.0
CMS1_k127_5598297_1 Peptidase family C69 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002537 546.0
CMS1_k127_5598297_10 Protein of unknown function (DUF1573) - - - 0.000000000000000000001389 103.0
CMS1_k127_5598297_11 Threonine/Serine exporter, ThrE - - - 0.0000000000000002823 86.0
CMS1_k127_5598297_2 twitching motility protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000304 493.0
CMS1_k127_5598297_3 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004854 458.0
CMS1_k127_5598297_4 phosphatidylethanolamine metabolic process K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 459.0
CMS1_k127_5598297_5 Phosphoserine phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 413.0
CMS1_k127_5598297_6 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 310.0
CMS1_k127_5598297_7 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000712 296.0
CMS1_k127_5598297_8 dUTPase - - - 0.000000000000000000000000000000000000000000000000000000002735 203.0
CMS1_k127_5598297_9 Putative threonine/serine exporter - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0008150,GO:0015711,GO:0015740,GO:0015744,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0050896,GO:0051179,GO:0051234,GO:0071702,GO:0071944 - 0.00000000000000000000000000000000000004208 153.0
CMS1_k127_5602421_0 phosphoribosylformylglycinamidine synthase K01952 - 6.3.5.3 0.0 1267.0
CMS1_k127_5602421_1 Belongs to the UPF0176 family - - - 0.00003364 50.0
CMS1_k127_5604957_0 transferase activity, transferring glycosyl groups - - - 6.699e-208 660.0
CMS1_k127_5604957_1 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 520.0
CMS1_k127_5604957_2 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.000001117 52.0
CMS1_k127_5607697_0 SMART Phospholipid glycerol acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005082 539.0
CMS1_k127_5607697_1 Transketolase, pyrimidine binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 489.0
CMS1_k127_5607697_10 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001036 267.0
CMS1_k127_5607697_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009437 253.0
CMS1_k127_5607697_12 Outer membrane lipoprotein K05807 - - 0.000000000000000000000000000000000000000000000000000000108 209.0
CMS1_k127_5607697_13 - - - - 0.00000000000000000000000000000000000000000008628 174.0
CMS1_k127_5607697_14 Ribosomal L28 family K02902 - - 0.0000000000000000000000000000004349 124.0
CMS1_k127_5607697_15 - - - - 0.0000000000000000000004157 106.0
CMS1_k127_5607697_16 - - - - 0.00000000000000000003622 99.0
CMS1_k127_5607697_17 PFAM Fimbrial assembly family protein - - - 0.0000000005351 68.0
CMS1_k127_5607697_18 Lipopolysaccharide-assembly - - - 0.0000000006682 67.0
CMS1_k127_5607697_2 GlnD PII-uridylyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 483.0
CMS1_k127_5607697_3 Transketolase, thiamine diphosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 455.0
CMS1_k127_5607697_4 Mu-like prophage FluMu protein gp28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596 441.0
CMS1_k127_5607697_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 402.0
CMS1_k127_5607697_6 e3 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 406.0
CMS1_k127_5607697_7 protein transport across the cell outer membrane K02453,K02666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 392.0
CMS1_k127_5607697_8 Protein of unknown function (DUF935) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007068 299.0
CMS1_k127_5607697_9 Predicted permease YjgP/YjgQ family K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002257 284.0
CMS1_k127_5616499_0 Sodium:neurotransmitter symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 592.0
CMS1_k127_5616499_1 Starch synthase catalytic domain K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003127 545.0
CMS1_k127_5616499_10 - - - - 0.0000000000000006088 91.0
CMS1_k127_5616499_11 response regulator K03413 - - 0.000000000002569 69.0
CMS1_k127_5616499_2 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004576 377.0
CMS1_k127_5616499_3 PFAM LrgB family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004749 328.0
CMS1_k127_5616499_4 PFAM permease YjgP YjgQ family protein K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005144 316.0
CMS1_k127_5616499_5 PFAM ComEC Rec2-related protein K02238 - - 0.0000000000000000000000000000000000000000000000000000000006669 223.0
CMS1_k127_5616499_6 Abortive infection protein - - - 0.0000000000000000000000000000000000000000001946 168.0
CMS1_k127_5616499_7 PFAM LrgA family protein K06518 - - 0.00000000000000000000000000000000001408 139.0
CMS1_k127_5616499_8 Protein of unknown function (DUF2971) - - - 0.0000000000000000000000004726 112.0
CMS1_k127_5616499_9 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000005013 81.0
CMS1_k127_5627781_0 Nitrogenase component 1 type Oxidoreductase K02586 - 1.18.6.1 3.057e-298 923.0
CMS1_k127_5627781_1 Nitrogenase component 1 type Oxidoreductase K02587 - - 3.163e-222 696.0
CMS1_k127_5627781_10 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 316.0
CMS1_k127_5627781_11 iron ion homeostasis K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004471 303.0
CMS1_k127_5627781_12 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 298.0
CMS1_k127_5627781_13 PBP superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002107 288.0
CMS1_k127_5627781_14 TOBE domain K02017 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004181 283.0
CMS1_k127_5627781_15 Molybdate ABC transporter K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000242 262.0
CMS1_k127_5627781_16 Putative heavy-metal chelation K09138 - - 0.00000000000000000000000000000000000000000000000000000000000000007604 230.0
CMS1_k127_5627781_17 PFAM ABC transporter K02013,K09820 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000002151 234.0
CMS1_k127_5627781_18 tRNA m6t6A37 methyltransferase activity K01628 - 4.1.2.17 0.00000000000000000000000001802 115.0
CMS1_k127_5627781_19 Biopolymer transporter TonB K03832 - - 0.0000000005389 68.0
CMS1_k127_5627781_2 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 8.332e-199 636.0
CMS1_k127_5627781_3 TonB-dependent Receptor Plug K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 514.0
CMS1_k127_5627781_4 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein K02588 - 1.18.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 491.0
CMS1_k127_5627781_5 Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein K02585,K02592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000774 400.0
CMS1_k127_5627781_6 nickel cation binding K03189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009451 368.0
CMS1_k127_5627781_7 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007357 371.0
CMS1_k127_5627781_8 ADP-ribosylglycohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 343.0
CMS1_k127_5627781_9 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005006 323.0
CMS1_k127_5632617_0 Cobaltochelatase CobS subunit N terminal K09882 - 6.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004671 539.0
CMS1_k127_5632617_1 Cobalamin biosynthesis protein CobT K09883 - 6.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 466.0
CMS1_k127_5632617_2 DnaJ molecular chaperone homology domain - - - 0.0000000008418 59.0
CMS1_k127_5643072_0 Belongs to the glycosyl hydrolase 13 family K01200 - 3.2.1.41 1.693e-230 739.0
CMS1_k127_5643072_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00260,K00261,K00262 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.4.1.2,1.4.1.3,1.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 473.0
CMS1_k127_5643072_2 DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003738 439.0
CMS1_k127_5643072_3 Protein of unknown function with HXXEE motif - - - 0.000000008648 64.0
CMS1_k127_5643072_4 PFAM NAD dependent epimerase dehydratase family K07071 - - 0.0001207 47.0
CMS1_k127_565195_0 phosphoserine phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000009656 199.0
CMS1_k127_565195_1 Y_Y_Y domain - - - 0.0000000000000000000000000000000000001004 154.0
CMS1_k127_565195_2 Domain of unknown function (DUF1987) - - - 0.000000000000000000000000001867 115.0
CMS1_k127_565195_3 - - - - 0.0000214 53.0
CMS1_k127_566278_0 ABC transporter K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 592.0
CMS1_k127_566278_1 Type II and III secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008486 435.0
CMS1_k127_566278_2 secretion system K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000612 267.0
CMS1_k127_566278_3 Bifunctional nuclease K08999 - - 0.0000000000000000000000000000000000000000000000006238 179.0
CMS1_k127_566278_4 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000001828 130.0
CMS1_k127_566278_5 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000002275 102.0
CMS1_k127_5663467_0 pyrimidine-nucleoside phosphorylase K00756 - 2.4.2.2 1.018e-217 683.0
CMS1_k127_5663467_1 Arginyl tRNA synthetase N terminal dom K01887 - 6.1.1.19 1.394e-209 667.0
CMS1_k127_5663467_10 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000002188 113.0
CMS1_k127_5663467_11 PFAM Preprotein translocase SecG subunit K03075 - - 0.00000000000000002174 88.0
CMS1_k127_5663467_2 Sulfate transporter antisigma-factor antagonist STAS K03321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005832 279.0
CMS1_k127_5663467_3 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000000000000000849 224.0
CMS1_k127_5663467_4 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000001482 219.0
CMS1_k127_5663467_5 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000009674 214.0
CMS1_k127_5663467_6 - - - - 0.00000000000000000000000000000000000000008119 162.0
CMS1_k127_5663467_7 HDOD domain - - - 0.0000000000000000000000000000000001023 146.0
CMS1_k127_5663467_8 Zincin-like metallopeptidase - - - 0.0000000000000000000000000000009036 125.0
CMS1_k127_5663467_9 DnaJ C terminal domain K05516 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0097159,GO:1901363 - 0.0000000000000000000000000000274 128.0
CMS1_k127_5663760_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1590.0
CMS1_k127_5663760_1 Protein conserved in bacteria - - - 2.111e-265 828.0
CMS1_k127_5663760_10 recombinase activity - - - 0.000001948 51.0
CMS1_k127_5663760_2 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 9.345e-213 665.0
CMS1_k127_5663760_3 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005462 265.0
CMS1_k127_5663760_4 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001011 249.0
CMS1_k127_5663760_5 transport system, permease component K13894 - - 0.000000000000000000000000000000000000000000000000000000000000000004572 231.0
CMS1_k127_5663760_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000000000000000000000000000000000000000000000000000000005633 210.0
CMS1_k127_5663760_7 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000000000000000001761 184.0
CMS1_k127_5663760_8 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000000000001878 138.0
CMS1_k127_5663760_9 Belongs to the SecE SEC61-gamma family K03073 - - 0.000000000001299 70.0
CMS1_k127_5688551_0 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 441.0
CMS1_k127_5688551_1 Nucleotidyl transferase K00971 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 397.0
CMS1_k127_5688551_2 oligosaccharyl transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002661 395.0
CMS1_k127_5688551_3 glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 324.0
CMS1_k127_5688551_4 Na+/Pi-cotransporter - - - 0.000000000000000000000000000000000000000000000000000000886 206.0
CMS1_k127_5688551_5 PhoU domain - - - 0.00000000000000000000000000000000000000000000000001737 187.0
CMS1_k127_5688551_6 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000000000000000000000001439 157.0
CMS1_k127_5688551_7 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000001194 139.0
CMS1_k127_5693019_0 Alpha-L-fucosidase K01206 - 3.2.1.51 1.53e-301 943.0
CMS1_k127_5693019_1 Belongs to the glycosyl hydrolase 31 family K07407 - 3.2.1.22 9.173e-273 848.0
CMS1_k127_5693019_10 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 389.0
CMS1_k127_5693019_11 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000001192 206.0
CMS1_k127_5693019_12 spore germination - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000004958 197.0
CMS1_k127_5693019_13 DNA-templated transcription, initiation K02405 - - 0.000000000000000000000000000000000000000132 157.0
CMS1_k127_5693019_14 - - - - 0.000000000000000000000000000000000000002088 151.0
CMS1_k127_5693019_15 Belongs to the UPF0251 family - - - 0.0000000000000000000006205 98.0
CMS1_k127_5693019_16 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.0000000000000000005635 93.0
CMS1_k127_5693019_17 Thioesterase superfamily - - - 0.0000000000001598 76.0
CMS1_k127_5693019_2 beta-galactosidase activity K01190 - 3.2.1.23 3.603e-244 779.0
CMS1_k127_5693019_3 Insulinase (Peptidase family M16) K07263 - - 2.878e-213 691.0
CMS1_k127_5693019_4 Beta-Casp domain K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 566.0
CMS1_k127_5693019_5 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 524.0
CMS1_k127_5693019_6 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000355 505.0
CMS1_k127_5693019_7 Belongs to the glycosyl hydrolase 43 family K01198,K01209 - 3.2.1.37,3.2.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 478.0
CMS1_k127_5693019_8 Protein of unknown function (DUF1343) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 447.0
CMS1_k127_5693019_9 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 424.0
CMS1_k127_5704443_0 TIGRFAM outer membrane autotransporter barrel domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001661 282.0
CMS1_k127_5704443_1 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.000000000000000000000000000000002465 131.0
CMS1_k127_5704443_2 addiction module antidote protein HigA - - - 0.0000000000000000000456 93.0
CMS1_k127_5704443_3 Segregation and condensation complex subunit ScpB - - - 0.00000000000000000007025 90.0
CMS1_k127_5706576_0 FliG middle domain K02410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 362.0
CMS1_k127_5706576_1 Caspase domain - - - 0.00000000000000000000000000000000000000000000000000000001146 226.0
CMS1_k127_5706576_2 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.0000000000000000000000000000000000000000000000000000005115 205.0
CMS1_k127_5706576_3 Ribose/Galactose Isomerase - - - 0.000000000000000000000000000000000000000000000000000005305 194.0
CMS1_k127_5706576_4 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.000000000000000000000000000000000000000001231 161.0
CMS1_k127_5706576_5 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000005416 152.0
CMS1_k127_5711238_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 9.708e-276 858.0
CMS1_k127_5711238_1 serine-type endopeptidase activity K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006209 304.0
CMS1_k127_5711238_2 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.000000000000000000000000000000000000000000000000000000000000000000787 233.0
CMS1_k127_5711238_3 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07712 - - 0.0000000000145 69.0
CMS1_k127_5729121_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 4.344e-257 805.0
CMS1_k127_5729121_1 Belongs to the bacterial plant glucose-1-phosphate adenylyltransferase family K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007884 542.0
CMS1_k127_5729121_2 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007467 404.0
CMS1_k127_5729121_3 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007435 263.0
CMS1_k127_5729121_4 RNHCP domain - - - 0.0000000000000000000004673 96.0
CMS1_k127_5729121_5 Lipoprotein - - - 0.00000002462 64.0
CMS1_k127_5731813_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009488 270.0
CMS1_k127_5731813_1 Protein-arginine kinase K19405 - 2.7.14.1 0.00000000000000000000000000000000000000000000000000000000003957 211.0
CMS1_k127_5731813_2 UvrB/uvrC motif K19411 - - 0.00000000000000000000000000000000000000000000000000000002811 201.0
CMS1_k127_5741172_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002424 290.0
CMS1_k127_5741172_1 PFAM chemotaxis sensory transducer K03406 - - 0.0000000004878 64.0
CMS1_k127_57756_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 459.0
CMS1_k127_57756_1 Phenazine biosynthesis-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008886 319.0
CMS1_k127_57756_2 Prephenate dehydrogenase K00220 - 1.3.1.12,1.3.1.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004474 295.0
CMS1_k127_57756_3 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.00000000000000000000000000000000000000000000000000007639 192.0
CMS1_k127_57756_4 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000001072 160.0
CMS1_k127_5782434_0 Sodium Bile acid symporter family K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 535.0
CMS1_k127_5782434_1 Predicted permease K07089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006951 477.0
CMS1_k127_5782434_10 C4-type zinc ribbon domain K07164 - - 0.0000000000000000000000000000003956 132.0
CMS1_k127_5782434_11 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000002335 112.0
CMS1_k127_5782434_12 Thioredoxin domain - - - 0.000000000000000000007719 95.0
CMS1_k127_5782434_13 - - - - 0.000009705 49.0
CMS1_k127_5782434_2 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 377.0
CMS1_k127_5782434_3 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005928 328.0
CMS1_k127_5782434_4 NmrA-like family K19267 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 328.0
CMS1_k127_5782434_5 mannose-ethanolamine phosphotransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 329.0
CMS1_k127_5782434_6 low molecular weight K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000009276 207.0
CMS1_k127_5782434_7 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000000000001844 176.0
CMS1_k127_5782434_8 Domain of unknown function (DUF5069) - - - 0.0000000000000000000000000000000000000000000001732 174.0
CMS1_k127_5782434_9 Thioredoxin K03671 - - 0.000000000000000000000000000000000000003897 149.0
CMS1_k127_580206_0 ATP-dependent helicase C-terminal K03579 - 3.6.4.13 6.312e-260 831.0
CMS1_k127_580206_1 aminotransferase class I and II K10907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007323 576.0
CMS1_k127_580206_10 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000004019 142.0
CMS1_k127_580206_11 Protein of unknown function (DUF4236) - - - 0.0000000000000000003766 100.0
CMS1_k127_580206_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003433 572.0
CMS1_k127_580206_3 Melibiase K07407 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0004557,GO:0005975,GO:0005976,GO:0006080,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0015925,GO:0016052,GO:0016787,GO:0016798,GO:0043170,GO:0044238,GO:0051069,GO:0051682,GO:0071704,GO:1901575 3.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 503.0
CMS1_k127_580206_4 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 462.0
CMS1_k127_580206_5 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 423.0
CMS1_k127_580206_6 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008591 372.0
CMS1_k127_580206_7 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005605 286.0
CMS1_k127_580206_8 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003462 263.0
CMS1_k127_580206_9 RelA SpoT domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000002561 239.0
CMS1_k127_5817186_0 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate K10206 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 349.0
CMS1_k127_5817186_1 nucleotide catabolic process K01077,K01081 - 3.1.3.1,3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 358.0
CMS1_k127_5817186_2 Inositol monophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001651 263.0
CMS1_k127_5817186_3 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.0000000000000000000000000000000000000002637 158.0
CMS1_k127_5817186_4 Biotin/lipoate A/B protein ligase family K03800 - 6.3.1.20 0.000000000000000000000000000000000000001102 156.0
CMS1_k127_5817186_5 Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose K16212,K20885 - 2.4.1.281,2.4.1.339,2.4.1.340 0.00000001737 55.0
CMS1_k127_5848024_0 Cytidylate kinase-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 499.0
CMS1_k127_5848024_1 beta-1,4-mannooligosaccharide phosphorylase K20885 - 2.4.1.339,2.4.1.340 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 315.0
CMS1_k127_5848024_2 Transcriptional regulator K02099,K02508,K07506,K18954 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003213 259.0
CMS1_k127_5848024_3 haloacid dehalogenase-like hydrolase K01091,K06019 - 3.1.3.18,3.6.1.1 0.000000000000000000000000000000000000000000000000000006621 201.0
CMS1_k127_5849395_0 Endoribonuclease that initiates mRNA decay K18682 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 457.0
CMS1_k127_5849395_1 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000007529 169.0
CMS1_k127_5849395_2 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.0000000000000000000000000000000000000002208 168.0
CMS1_k127_5864251_0 DNA polymerase type-B family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003664 604.0
CMS1_k127_5864251_1 twitching motility protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002148 457.0
CMS1_k127_5864251_2 General secretory system II protein E domain protein K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 317.0
CMS1_k127_5885034_0 sigma-54 factor interaction domain-containing protein - - - 9.665e-197 624.0
CMS1_k127_5885034_1 AMP-binding enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004133 542.0
CMS1_k127_5885034_10 PFAM ABC transporter related K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000007438 257.0
CMS1_k127_5885034_11 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002239 251.0
CMS1_k127_5885034_12 TIGRFAM phosphoserine phosphatase homoserine phosphotransferase bifunctional protein K02203 - 2.7.1.39,3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000003325 245.0
CMS1_k127_5885034_13 General secretory system II protein E domain protein K02652 - - 0.000000000000000000000000000000000000000000000000000000000002215 217.0
CMS1_k127_5885034_14 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000002579 194.0
CMS1_k127_5885034_15 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000008644 200.0
CMS1_k127_5885034_16 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000001249 189.0
CMS1_k127_5885034_17 PFAM NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000005069 141.0
CMS1_k127_5885034_18 - - - - 0.0000000000000000000000000002204 121.0
CMS1_k127_5885034_19 oxidation-reduction process K09022 - 3.5.99.10 0.000000000000000000000005215 106.0
CMS1_k127_5885034_2 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 407.0
CMS1_k127_5885034_20 oligosaccharyl transferase activity - - - 0.0000000000007916 82.0
CMS1_k127_5885034_21 - - - - 0.000031 53.0
CMS1_k127_5885034_3 Peptidase family M50 K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 387.0
CMS1_k127_5885034_4 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 342.0
CMS1_k127_5885034_5 3-beta hydroxysteroid dehydrogenase K22320 - 1.1.1.412 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 349.0
CMS1_k127_5885034_6 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009775 344.0
CMS1_k127_5885034_7 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 316.0
CMS1_k127_5885034_8 AAA domain K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 304.0
CMS1_k127_5885034_9 Trypsin-like peptidase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001511 283.0
CMS1_k127_5886801_0 Pyridoxal-dependent decarboxylase conserved domain - - - 2.037e-222 701.0
CMS1_k127_5886801_1 COG3316 Transposase and inactivated derivatives K07498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 323.0
CMS1_k127_5886801_2 COG2801 Transposase and inactivated derivatives K07497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 310.0
CMS1_k127_5886801_3 Trypsin-like serine protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004789 259.0
CMS1_k127_5886801_4 Transposase and inactivated derivatives - - - 0.0003987 44.0
CMS1_k127_5897195_0 Glycosyl hydrolases family 2, TIM barrel domain K01190,K01195 GO:0003674,GO:0003824,GO:0004553,GO:0004565,GO:0005575,GO:0005975,GO:0005984,GO:0005988,GO:0005990,GO:0008150,GO:0008152,GO:0009056,GO:0009311,GO:0009313,GO:0009341,GO:0009987,GO:0015925,GO:0016052,GO:0016787,GO:0016798,GO:0032991,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0046352,GO:0071704,GO:1901575,GO:1902494 3.2.1.23,3.2.1.31 2.372e-211 691.0
CMS1_k127_5897195_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519 446.0
CMS1_k127_5897195_2 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 339.0
CMS1_k127_5897195_3 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003321 250.0
CMS1_k127_5926941_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 3.417e-195 623.0
CMS1_k127_5926941_1 PFAM AMP-dependent synthetase and ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000666 323.0
CMS1_k127_5930696_0 NAD synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 415.0
CMS1_k127_5930696_1 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000000000000000000000000004842 242.0
CMS1_k127_5942530_0 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005302 338.0
CMS1_k127_5942530_1 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005846 266.0
CMS1_k127_5942530_2 DDE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000141 263.0
CMS1_k127_5942530_3 Domains FehydlgC, FeS, sigma54 interaction, HTH8 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004384 244.0
CMS1_k127_5942530_4 - - - - 0.00000000000000000000000000000000000003013 156.0
CMS1_k127_5942530_5 Transposase K07483 - - 0.000000000000000000000000006128 113.0
CMS1_k127_5942530_6 Protein of unknown function (DUF4019) - - - 0.0000000000000000001281 93.0
CMS1_k127_5942530_7 - - - - 0.0000000000000003914 83.0
CMS1_k127_5949257_0 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006636 520.0
CMS1_k127_5949257_1 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 437.0
CMS1_k127_5949257_2 FabA-like domain K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000001537 248.0
CMS1_k127_5949257_3 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K03429 - 2.4.1.315 0.00000000000000000000000000000000000000000000000000000003137 204.0
CMS1_k127_5949257_4 Inositol monophosphatase family K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000001507 171.0
CMS1_k127_5949257_5 TIGRFAM transcriptional regulator, Rrf2 family - - - 0.0000000000000000000000000000000000000008014 151.0
CMS1_k127_5949257_6 Type II secretion system (T2SS), protein G K02456 - - 0.00000000002257 67.0
CMS1_k127_5949257_7 - - - - 0.00000000008842 69.0
CMS1_k127_5983929_0 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) K01661 - 4.1.3.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 452.0
CMS1_k127_5983929_1 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008536 387.0
CMS1_k127_5983929_2 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000001149 173.0
CMS1_k127_5983929_3 PFAM alpha-2-macroglobulin domain protein K06894 - - 0.0000000000000003009 93.0
CMS1_k127_6003482_0 IMP dehydrogenase / GMP reductase domain K00088 - 1.1.1.205 5.601e-211 667.0
CMS1_k127_6003482_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008858 413.0
CMS1_k127_6003482_2 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000005488 157.0
CMS1_k127_6003482_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5 0.0000003431 52.0
CMS1_k127_6012399_0 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005293 514.0
CMS1_k127_6012399_1 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 431.0
CMS1_k127_6012399_2 Survival protein SurE K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000007807 192.0
CMS1_k127_6012399_3 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.000000000000000000000000000000000000000000001612 176.0
CMS1_k127_6012399_4 NIF3 (NGG1p interacting factor 3) - - - 0.000000000000000000000000000000000000000000004513 166.0
CMS1_k127_6012399_5 - - - - 0.0000000000000000000000000000000001042 139.0
CMS1_k127_6012399_6 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000000000000001003 137.0
CMS1_k127_6012399_7 DoxX family K15977 - - 0.00002294 51.0
CMS1_k127_6042272_0 Carboxypeptidase Taq (M32) metallopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003173 516.0
CMS1_k127_6045160_0 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000886 358.0
CMS1_k127_6045160_1 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000008924 210.0
CMS1_k127_6045160_2 energy transducer activity K03646,K03832 - - 0.00000003453 64.0
CMS1_k127_6054088_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1052.0
CMS1_k127_6057481_0 COG1112 Superfamily I DNA and RNA helicases and helicase subunits - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 534.0
CMS1_k127_6057481_1 Scavenger mRNA decapping enzyme C-term binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 404.0
CMS1_k127_606937_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 357.0
CMS1_k127_606937_1 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000001707 237.0
CMS1_k127_6069825_0 Belongs to the AAA ATPase family K13525 - - 2.291e-298 930.0
CMS1_k127_6069825_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 488.0
CMS1_k127_6069825_2 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009786 391.0
CMS1_k127_6069825_3 PFAM Gas vesicle synthesis protein GvpL GvpF - - - 0.000000000000000000000000000000000000000000000000001574 192.0
CMS1_k127_6069825_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000963 176.0
CMS1_k127_6082511_0 carbohydrate binding K21298 - 2.4.1.333 0.0 1108.0
CMS1_k127_6082511_1 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 3.955e-270 851.0
CMS1_k127_6082511_2 Putative glucoamylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006107 580.0
CMS1_k127_6082511_3 MFS/sugar transport protein K03292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 429.0
CMS1_k127_6087258_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0002790,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 1.271e-221 720.0
CMS1_k127_6087258_1 FtsK/SpoIIIE family K03466 - - 1.585e-220 713.0
CMS1_k127_6087258_2 mannose-6-phosphate isomerase K01809 - 5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005052 381.0
CMS1_k127_6087258_3 macromolecule localization K01992,K09690,K09691,K09692 - - 0.0000000000000000000000000000000000000000286 159.0
CMS1_k127_6087258_4 Small Multidrug Resistance protein K03297 - - 0.000000000000000000000000000000000000001966 149.0
CMS1_k127_6087258_5 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000004715 78.0
CMS1_k127_6101723_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0 1142.0
CMS1_k127_6101723_1 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 293.0
CMS1_k127_6101723_2 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000003692 255.0
CMS1_k127_6112464_0 RNA pseudouridylate synthase - - - 0.000000000000000000000000000000000001388 149.0
CMS1_k127_6112464_1 RNA-directed DNA polymerase - - - 0.0000000000000000000009378 100.0
CMS1_k127_6112464_2 Ribosomal protein S20 K02968 - - 0.00000000000001197 79.0
CMS1_k127_6118876_0 GTP-binding protein K06207 - - 1.163e-239 755.0
CMS1_k127_6118876_1 S-layer homology domain - - - 0.000000000000000000006166 107.0
CMS1_k127_6134641_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 5.148e-202 636.0
CMS1_k127_6134641_1 Adenylosuccinate lyase C-terminus K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 578.0
CMS1_k127_6134641_10 lipopolysaccharide binding K09774 - - 0.0000000000004076 77.0
CMS1_k127_6134641_11 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm - - - 0.00000000001822 70.0
CMS1_k127_6134641_2 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008178 387.0
CMS1_k127_6134641_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 384.0
CMS1_k127_6134641_4 ABC transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 347.0
CMS1_k127_6134641_5 peptidase A24A prepilin type IV K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006096 329.0
CMS1_k127_6134641_6 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000002482 238.0
CMS1_k127_6134641_7 biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000002075 219.0
CMS1_k127_6134641_8 NUDIX domain - - - 0.000000000000000000000000000000000000000005084 161.0
CMS1_k127_6134641_9 Pfam SNARE associated Golgi protein - - - 0.00000000000000007468 89.0
CMS1_k127_6164833_0 Belongs to the TPP enzyme family K01576 - 4.1.1.7 7.915e-235 739.0
CMS1_k127_6164833_1 ATPase family associated with various cellular activities (AAA) K13525 - - 1.112e-207 668.0
CMS1_k127_6164833_2 PFAM Cys Met metabolism pyridoxal-phosphate- dependent protein K01740,K10764 - 2.5.1.49 5.048e-194 614.0
CMS1_k127_6164833_3 aerobic electron transport chain K00425 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 576.0
CMS1_k127_6164833_4 PFAM ThiJ PfpI domain-containing protein K03152,K05520 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 361.0
CMS1_k127_6164833_5 oxidative phosphorylation K00426 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0016682,GO:0019646,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0070069,GO:0071944,GO:0097159,GO:1901363 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 310.0
CMS1_k127_6164833_6 PFAM Gas vesicle synthesis protein GvpL GvpF - - - 0.00000000000000000000000000000007345 136.0
CMS1_k127_6164833_7 cheY-homologous receiver domain - - - 0.00000000001156 69.0
CMS1_k127_6164833_8 Response regulator receiver domain - - - 0.000001027 55.0
CMS1_k127_6167163_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 2.579e-205 651.0
CMS1_k127_6167163_1 Belongs to the glycosyl hydrolase 2 family K05970 - 3.1.1.53 1.836e-197 634.0
CMS1_k127_6167163_10 PFAM Methionine biosynthesis MetW protein - - - 0.00000000000000000000000000000000000000000000000000001572 200.0
CMS1_k127_6167163_11 Bacterial inner membrane protein - - - 0.00000000000000000000000000000000000000000000009363 173.0
CMS1_k127_6167163_12 AAA domain K07028 - - 0.0000000000000000000000000000000000003008 147.0
CMS1_k127_6167163_13 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.0000000000000000000000000000006673 124.0
CMS1_k127_6167163_14 Smr domain - - - 0.0000000000000000000000000004665 116.0
CMS1_k127_6167163_15 Putative Na+/H+ antiporter - - - 0.000000000000000000000000002065 121.0
CMS1_k127_6167163_16 - - - - 0.00000000000000000000004076 102.0
CMS1_k127_6167163_2 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 610.0
CMS1_k127_6167163_3 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 603.0
CMS1_k127_6167163_4 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 522.0
CMS1_k127_6167163_5 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005489 490.0
CMS1_k127_6167163_6 PFAM aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 379.0
CMS1_k127_6167163_7 Domain of unknown function (DUF1730) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 314.0
CMS1_k127_6167163_8 pfkB family carbohydrate kinase K00847 - 2.7.1.4 0.00000000000000000000000000000000000000000000000000000001152 208.0
CMS1_k127_6167163_9 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000001052 208.0
CMS1_k127_6172281_0 ATPases associated with a variety of cellular activities K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000001244 235.0
CMS1_k127_6172281_1 PFAM Phosphomethylpyrimidine kinase type-1 K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000004591 223.0
CMS1_k127_6172281_2 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000001267 61.0
CMS1_k127_6187720_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003592 349.0
CMS1_k127_6187720_1 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003064 272.0
CMS1_k127_6187720_2 TIGRFAM riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000001967 206.0
CMS1_k127_6214185_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1251.0
CMS1_k127_6214185_1 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 7.542e-249 789.0
CMS1_k127_6214185_10 Thiazole biosynthesis protein ThiG K03149 - 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 357.0
CMS1_k127_6214185_11 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003744 341.0
CMS1_k127_6214185_12 Acyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 299.0
CMS1_k127_6214185_13 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003788 272.0
CMS1_k127_6214185_14 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001636 249.0
CMS1_k127_6214185_15 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001688 242.0
CMS1_k127_6214185_16 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000000004753 192.0
CMS1_k127_6214185_17 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000003554 146.0
CMS1_k127_6214185_18 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.0000000000000000001182 93.0
CMS1_k127_6214185_19 PFAM Acyl-ACP thioesterase - - - 0.000000000000000006473 91.0
CMS1_k127_6214185_2 Alpha-L-fucosidase K01206 - 3.2.1.51 3.212e-197 628.0
CMS1_k127_6214185_3 TrkA-N domain K03499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000438 514.0
CMS1_k127_6214185_4 Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 483.0
CMS1_k127_6214185_5 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004742 426.0
CMS1_k127_6214185_6 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005746 422.0
CMS1_k127_6214185_7 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 394.0
CMS1_k127_6214185_8 Phospholipase_D-nuclease N-terminal K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002758 396.0
CMS1_k127_6214185_9 Cation transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007483 375.0
CMS1_k127_6216233_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1247.0
CMS1_k127_6216233_1 Belongs to the glycosyl hydrolase 31 family K01811 - 3.2.1.177 0.0 1176.0
CMS1_k127_6216233_3 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000002288 165.0
CMS1_k127_6216233_4 synthase K00703 GO:0000271,GO:0003674,GO:0003824,GO:0004373,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 0.000000000000000000001155 100.0
CMS1_k127_622656_0 MacB-like periplasmic core domain K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 405.0
CMS1_k127_622656_1 ATPases associated with a variety of cellular activities K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 286.0
CMS1_k127_622656_2 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000002828 141.0
CMS1_k127_6251217_0 reductase, alpha subunit K00394 - 1.8.99.2 0.0 1191.0
CMS1_k127_6251217_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 354.0
CMS1_k127_6251217_2 Adenosine-5'-phosphosulfate reductase beta subunit K00395 - 1.8.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005117 316.0
CMS1_k127_6251217_3 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000002816 252.0
CMS1_k127_6251217_4 - - - - 0.0000000000000000000000000000000000000000000000008939 178.0
CMS1_k127_6251217_5 Calcineurin-like phosphoesterase superfamily domain K03651 - 3.1.4.53 0.0000000000023 71.0
CMS1_k127_6251217_6 - - - - 0.00000000001281 66.0
CMS1_k127_633977_0 Peptidase family M3 K01414 - 3.4.24.70 1.151e-209 665.0
CMS1_k127_633977_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 501.0
CMS1_k127_633977_2 Conserved hypothetical protein 698 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 347.0
CMS1_k127_633977_3 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002085 283.0
CMS1_k127_654380_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 4.702e-254 789.0
CMS1_k127_654380_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005018 257.0
CMS1_k127_654380_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000002524 217.0
CMS1_k127_673654_0 DNA polymerase alpha chain like domain K02337 - 2.7.7.7 0.0 1234.0
CMS1_k127_673654_1 Bacterial regulatory protein, Fis family K07712 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 580.0
CMS1_k127_673654_10 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000002162 181.0
CMS1_k127_673654_11 GDP-mannose mannosyl hydrolase activity K03207,K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000004291 178.0
CMS1_k127_673654_12 PFAM Haloacid dehalogenase domain protein hydrolase K01091 - 3.1.3.18 0.0000000000000000000000000000000000000002733 157.0
CMS1_k127_673654_13 Abortive infection protein K07052 - - 0.000000000000000000000000000001782 131.0
CMS1_k127_673654_14 PFAM Uncharacterised protein family UPF0079, ATPase K06925 - - 0.00000000000000000000001421 109.0
CMS1_k127_673654_2 RimK-like ATPgrasp N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 544.0
CMS1_k127_673654_3 PFAM Glutamate-cysteine ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005237 394.0
CMS1_k127_673654_4 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003798 317.0
CMS1_k127_673654_5 esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000983 280.0
CMS1_k127_673654_6 COGs COG0767 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003631 275.0
CMS1_k127_673654_7 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000001199 251.0
CMS1_k127_673654_8 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000002623 251.0
CMS1_k127_673654_9 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000507 246.0
CMS1_k127_673706_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 3.875e-304 955.0
CMS1_k127_673706_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008708 514.0
CMS1_k127_673706_2 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 481.0
CMS1_k127_673706_3 - - - - 0.000000000000000000000000000000000000000000000000001367 194.0
CMS1_k127_673706_4 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488,K13819 - - 0.0000000000000000000000000000000000000000000004456 171.0
CMS1_k127_673706_5 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.00000000000000000000000000004068 121.0
CMS1_k127_673706_6 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.000000000000000000005131 94.0
CMS1_k127_673706_7 COG1682 ABC-type polysaccharide polyol phosphate export systems, permease component K09690 - - 0.0000001528 55.0
CMS1_k127_693044_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005266 508.0
CMS1_k127_693044_1 DEAD DEAH box helicase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 458.0
CMS1_k127_693044_2 DegT/DnrJ/EryC1/StrS aminotransferase family K13010,K15910,K19430 - 2.6.1.102,2.6.1.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006997 394.0
CMS1_k127_693044_3 Bacterial sugar transferase K13012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001521 258.0
CMS1_k127_693044_4 Bacterial transferase hexapeptide (six repeats) K13006,K19429 - - 0.000000000000000000000000000000000000000000000000000000000000003747 223.0
CMS1_k127_693044_5 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000826 197.0
CMS1_k127_693044_6 response regulator receiver - - - 0.00000000000000000000000000000000004367 138.0
CMS1_k127_693044_7 PFAM Methylamine - - - 0.00000000000007668 78.0
CMS1_k127_693044_8 Rhodanese Homology Domain - - - 0.0000003925 58.0
CMS1_k127_702147_0 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 492.0
CMS1_k127_702147_1 symbiont process K00612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 431.0
CMS1_k127_702147_2 Aspartyl Asparaginyl beta-hydroxylase - - - 0.000000000000000000000000001081 125.0
CMS1_k127_710931_0 Required for chromosome condensation and partitioning K03529 - - 2.231e-233 767.0
CMS1_k127_710931_1 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 6.908e-214 674.0
CMS1_k127_710931_2 Domain of unknown function (DUF4145) - - - 0.0000000000000000000000000001005 123.0
CMS1_k127_710931_3 TIGRFAM Addiction module toxin, RelE StbE K06218 - - 0.000000000000000000000000004166 112.0
CMS1_k127_710931_4 TraY domain - - - 0.000000002223 60.0
CMS1_k127_72247_0 Actin K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 394.0
CMS1_k127_72247_1 PFAM CBS domain containing protein K03281 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 404.0
CMS1_k127_72247_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000009373 218.0
CMS1_k127_72247_3 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000008938 198.0
CMS1_k127_72247_4 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.000000000000000000000000000000000000000000000000001567 188.0
CMS1_k127_72247_5 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02768,K02806 - 2.7.1.202 0.00000000263 64.0
CMS1_k127_754482_0 phospholipase Carboxylesterase - - - 1.963e-204 661.0
CMS1_k127_754482_1 SMART Nucleotide binding protein PINc - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003009 356.0
CMS1_k127_754482_2 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 332.0
CMS1_k127_754482_3 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000985 310.0
CMS1_k127_754482_4 methyl-accepting chemotaxis protein K03406 - - 0.0002304 51.0
CMS1_k127_762590_0 Efflux pump membrane transporter K18138 - - 0.0 1176.0
CMS1_k127_762590_1 Polyphosphate kinase 2 (PPK2) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004394 434.0
CMS1_k127_762590_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 372.0
CMS1_k127_762590_3 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 304.0
CMS1_k127_762590_4 GDSL-like Lipase/Acylhydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000005923 243.0
CMS1_k127_762590_5 Efflux transporter, outer membrane factor lipoprotein, NodT family K18139 - - 0.00000000000000000000000000000000000000000000000000000000000000313 225.0
CMS1_k127_789706_0 Putative amidoligase enzyme (DUF2126) - - - 0.0 1450.0
CMS1_k127_789706_1 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 1.369e-252 784.0
CMS1_k127_789706_10 spermidine putrescine transport system, permease K11071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 382.0
CMS1_k127_789706_11 Spermidine putrescine-binding periplasmic protein K11069 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007994 378.0
CMS1_k127_789706_12 PFAM glycosyl hydrolase 53 domain protein K01224 - 3.2.1.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006925 371.0
CMS1_k127_789706_13 Creatinine amidohydrolase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 368.0
CMS1_k127_789706_14 A predicted alpha-helical domain with a conserved ER motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004956 355.0
CMS1_k127_789706_15 Belongs to the ABC transporter superfamily K11072 - 3.6.3.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003109 332.0
CMS1_k127_789706_16 ABC-type spermidine putrescine transport system, permease component II K11070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000562 317.0
CMS1_k127_789706_17 siderophore transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005086 300.0
CMS1_k127_789706_18 PFAM Iron-containing alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007983 297.0
CMS1_k127_789706_19 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001641 271.0
CMS1_k127_789706_2 PFAM glycoside hydrolase family 62 - - - 1.63e-239 749.0
CMS1_k127_789706_20 Shikimate / quinate 5-dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000001037 237.0
CMS1_k127_789706_21 COG2148 Sugar transferases involved in lipopolysaccharide synthesis - - - 0.00000000000000000000000000000000000000000000000000000000000935 213.0
CMS1_k127_789706_22 helix_turn _helix lactose operon repressor - - - 0.00000000000000000000000000000000000000000000218 177.0
CMS1_k127_789706_23 Glycosyl transferases group 1 - - - 0.0000000000000000000000001888 120.0
CMS1_k127_789706_3 Circularly permuted ATP-grasp type 2 - - - 2.828e-226 709.0
CMS1_k127_789706_4 Circularly permuted ATP-grasp type 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008549 607.0
CMS1_k127_789706_5 Alanine dehydrogenase/PNT, C-terminal domain K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005621 471.0
CMS1_k127_789706_6 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004847 430.0
CMS1_k127_789706_7 belongs to the aldehyde dehydrogenase family K06447 GO:0003674,GO:0003824,GO:0004029,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.2.1.71 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 406.0
CMS1_k127_789706_8 Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 397.0
CMS1_k127_789706_9 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K12256 - 2.6.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 395.0
CMS1_k127_790097_0 PFAM ATPase associated with various cellular activities AAA_3 K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002776 442.0
CMS1_k127_790097_1 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 334.0
CMS1_k127_790097_2 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 301.0
CMS1_k127_790097_3 von Willebrand factor type A domain - - - 0.00000000000000000000000000000000000000000000000000000002267 207.0
CMS1_k127_790097_4 lipopolysaccharide core region biosynthetic process K12981 GO:0000271,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0046401,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.00000000000001326 84.0
CMS1_k127_793789_0 AIR synthase related protein, N-terminal domain K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 377.0
CMS1_k127_793789_1 Hsp90 protein K04079 - - 0.000000000000000009392 83.0
CMS1_k127_793789_2 Protein conserved in bacteria - - - 0.00000000000000009155 89.0
CMS1_k127_811608_0 nucleoside 2-deoxyribosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007834 548.0
CMS1_k127_811608_1 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000001019 208.0
CMS1_k127_816042_0 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 581.0
CMS1_k127_816042_1 Chemotaxis sensory transducer K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001148 279.0
CMS1_k127_816042_2 ApaG domain K06195 - - 0.0000000000000000000000000000000000002458 144.0
CMS1_k127_828041_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 516.0
CMS1_k127_828041_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 405.0
CMS1_k127_828041_10 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000292 138.0
CMS1_k127_828041_11 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000002709 57.0
CMS1_k127_828041_12 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000427 66.0
CMS1_k127_828041_2 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 336.0
CMS1_k127_828041_3 Cation transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005018 339.0
CMS1_k127_828041_4 Orotidine 5'-phosphate decarboxylase / HUMPS family K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 319.0
CMS1_k127_828041_5 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 311.0
CMS1_k127_828041_6 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.00000000000000000000000000000000000000000000000000000000000000006317 231.0
CMS1_k127_828041_7 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.0000000000000000000000000000000000000000000000000000002427 209.0
CMS1_k127_828041_8 PFAM flagellin domain protein - - - 0.0000000000000000000000000000000000000000000000003136 189.0
CMS1_k127_828041_9 TrkA-N domain K03499 - - 0.00000000000000000000000000000000000000001775 160.0
CMS1_k127_843521_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004514 468.0
CMS1_k127_843521_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 448.0
CMS1_k127_855655_0 beta-1,4-mannooligosaccharide phosphorylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006403 523.0
CMS1_k127_855655_1 MFS/sugar transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000043 467.0
CMS1_k127_855655_2 Belongs to the glycosyl hydrolase 26 family K01218 - 3.2.1.78 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 405.0
CMS1_k127_855655_3 Transcriptional regulator, GntR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005134 346.0
CMS1_k127_855655_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009108 252.0
CMS1_k127_855655_5 iron dependent repressor K03709 - - 0.0000000000000000000000000000000000000000000000000000000000000000572 230.0
CMS1_k127_855655_6 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 - 4.4.1.8 0.0000000000000000000000000000002093 127.0
CMS1_k127_855655_7 Regulatory protein, FmdB family - - - 0.0000000000000000000000000001197 119.0
CMS1_k127_855655_8 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.000000000000000000000008757 102.0
CMS1_k127_862240_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18303 - - 1.508e-311 984.0
CMS1_k127_862240_1 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000006752 190.0
CMS1_k127_862240_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00004721 48.0
CMS1_k127_869820_0 HlyD family secretion protein K02005 - - 0.000000000000000000000000000000000000000000001972 173.0
CMS1_k127_869820_1 TIGRFAM Phage shock protein A K03969 - - 0.0000000000000000000000000000004061 129.0
CMS1_k127_869820_2 PspC domain protein K03973 - - 0.000000000000000000000003154 106.0
CMS1_k127_869820_3 outer membrane efflux protein - - - 0.0000000000003394 82.0
CMS1_k127_884635_0 glutaminyl-tRNA synthetase K01886 - 6.1.1.18 3.853e-233 734.0
CMS1_k127_884635_1 NAD(P)H dehydrogenase (quinone) activity K03809 - 1.6.5.2 0.000000000000000000000000000000000000000008061 157.0
CMS1_k127_940404_0 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003031 462.0
CMS1_k127_940404_1 Disulphide bond corrector protein DsbC K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 428.0
CMS1_k127_940404_2 Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 395.0
CMS1_k127_940404_3 Response regulator of the LytR AlgR family K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006964 279.0
CMS1_k127_940404_4 DNA integration - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001774 266.0
CMS1_k127_940404_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000004989 243.0
CMS1_k127_940404_6 Histidine kinase - - - 0.000000000000000000000000000000000000000002145 169.0
CMS1_k127_940404_7 - - - - 0.000000000000000000008781 103.0
CMS1_k127_940404_8 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179 - 3.2.1.4 0.000000000000002843 82.0
CMS1_k127_940404_9 DUF167 K09131 - - 0.000000000000111 74.0
CMS1_k127_957712_0 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000201 240.0
CMS1_k127_957712_1 CO dehydrogenase flavoprotein C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000003908 236.0
CMS1_k127_957712_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433,K19837 - 3.5.1.84,6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000005726 221.0