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Overview

ID MAG00504
Name CMS3_bin.135
Sample SMP0012
Taxonomy
Kingdom Bacteria
Phylum Chloroflexota
Class Dehalococcoidia
Order UBA2979
Family UBA2979
Genus
Species
Assembly information
Completeness (%) 87.78
Contamination (%) 2.94
GC content (%) 70.0
N50 (bp) 13,938
Genome size (bp) 2,992,999

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2687

Gene name Description KEGG GOs EC E-value Score Sequence
CMS3_k127_1005655_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 7.596e-211 669.0
CMS3_k127_1005655_1 Uncharacterised protein family (UPF0182) K09118 - - 6.061e-208 678.0
CMS3_k127_1005655_10 kinase related to dihydroxyacetone kinase K07030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006059 343.0
CMS3_k127_1005655_11 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003563 306.0
CMS3_k127_1005655_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000001141 230.0
CMS3_k127_1005655_13 FES K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000008171 220.0
CMS3_k127_1005655_14 Uncharacterised protein, DegV family COG1307 - - - 0.00000000000000000000000000000000000000000000000000000005543 207.0
CMS3_k127_1005655_15 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.0000000000000000000000000000000000000000000000000005219 194.0
CMS3_k127_1005655_16 Ribulose-phosphate 3 epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.0000000000000000000000000000000000000000000000291 180.0
CMS3_k127_1005655_17 ECF sigma factor K03088 - - 0.000000000000000000000000000000000000000008363 163.0
CMS3_k127_1005655_18 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.00000000000000000000000000000000001159 142.0
CMS3_k127_1005655_19 Nickel-containing superoxide dismutase K00518 - 1.15.1.1 0.00000000000000000000000000000000001301 141.0
CMS3_k127_1005655_2 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 3.245e-200 662.0
CMS3_k127_1005655_20 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000001273 126.0
CMS3_k127_1005655_21 deaminated base DNA N-glycosylase activity K21929 - 3.2.2.27 0.00000000000000000000000000006674 129.0
CMS3_k127_1005655_22 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K18917 - 1.20.4.3 0.000000000000000000000000001044 117.0
CMS3_k127_1005655_23 EVE domain - - - 0.0000000000000000000000007866 109.0
CMS3_k127_1005655_24 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000163 102.0
CMS3_k127_1005655_25 lipid binding K14954,K14955 GO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0008289,GO:0009405,GO:0009605,GO:0009607,GO:0009966,GO:0010469,GO:0010646,GO:0016020,GO:0020012,GO:0023051,GO:0030312,GO:0030545,GO:0030682,GO:0031982,GO:0035091,GO:0042783,GO:0042785,GO:0043167,GO:0043168,GO:0043207,GO:0043226,GO:0043227,GO:0043230,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044421,GO:0044464,GO:0048018,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051810,GO:0051812,GO:0051832,GO:0051834,GO:0051861,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0065007,GO:0065009,GO:0071944,GO:0075136,GO:0097367,GO:0097691,GO:0098772,GO:1903561 - 0.000000000000000000004219 103.0
CMS3_k127_1005655_26 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000004747 91.0
CMS3_k127_1005655_27 Transcriptional regulator - - - 0.00000000000000002368 91.0
CMS3_k127_1005655_29 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000004392 73.0
CMS3_k127_1005655_3 Homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 565.0
CMS3_k127_1005655_30 PspC domain - - - 0.000000000001177 74.0
CMS3_k127_1005655_31 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.00000000001844 77.0
CMS3_k127_1005655_32 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000009651 59.0
CMS3_k127_1005655_4 argininosuccinate lyase K01755 - 4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 529.0
CMS3_k127_1005655_5 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 469.0
CMS3_k127_1005655_6 Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003074 417.0
CMS3_k127_1005655_7 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003621 370.0
CMS3_k127_1005655_8 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003959 347.0
CMS3_k127_1005655_9 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009208 338.0
CMS3_k127_1008750_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003644 381.0
CMS3_k127_1008750_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005898 267.0
CMS3_k127_1008750_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000002903 170.0
CMS3_k127_1008750_3 Preprotein translocase, YajC subunit K03210 - - 0.0000003589 57.0
CMS3_k127_101168_0 TIGRFAM FeS assembly protein SufB K07033,K09014 - - 3.028e-219 689.0
CMS3_k127_101168_1 Belongs to the peptidase S16 family - - - 1.542e-217 720.0
CMS3_k127_101168_10 PFAM MmgE PrpD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 370.0
CMS3_k127_101168_11 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 337.0
CMS3_k127_101168_12 ABC transporter K09013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 301.0
CMS3_k127_101168_13 Methionyl-tRNA formyltransferase K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007982 278.0
CMS3_k127_101168_14 PFAM short-chain dehydrogenase reductase SDR K00023,K00059 - 1.1.1.100,1.1.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001027 274.0
CMS3_k127_101168_15 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000000002969 266.0
CMS3_k127_101168_16 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001152 241.0
CMS3_k127_101168_17 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000004133 240.0
CMS3_k127_101168_18 FAD linked oxidases, C-terminal domain K11472 - - 0.000000000000000000000000000000000000000000000000000004355 206.0
CMS3_k127_101168_19 COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000000000001049 193.0
CMS3_k127_101168_2 PFAM Methylmalonyl-CoA mutase K01847,K01848 - 5.4.99.2 3.861e-208 663.0
CMS3_k127_101168_20 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000003091 195.0
CMS3_k127_101168_21 FeS assembly protein SufD K07033,K09015 GO:0006790,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0040007,GO:0043207,GO:0044085,GO:0044237,GO:0044403,GO:0044419,GO:0050896,GO:0051186,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0071840,GO:0075136 - 0.000000000000000000000000000000000000000000003903 184.0
CMS3_k127_101168_22 COG0563 Adenylate kinase and related - - - 0.00000000000000000000000000000000000000000003627 168.0
CMS3_k127_101168_23 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000004339 181.0
CMS3_k127_101168_24 SUF system FeS assembly protein K04488 - - 0.00000000000000000000000000000000000007902 148.0
CMS3_k127_101168_25 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000001406 135.0
CMS3_k127_101168_26 MaoC domain protein dehydratase K17865 - 4.2.1.55 0.00000000000000000000000000000006543 131.0
CMS3_k127_101168_27 inositol monophosphate 1-phosphatase activity K01092 - 3.1.3.25 0.000000000000000000000000002431 126.0
CMS3_k127_101168_28 Iron-sulfur cluster assembly protein - - - 0.00000000000000000000001348 112.0
CMS3_k127_101168_29 PFAM Rieske 2Fe-2S domain protein K00363,K05710 - 1.7.1.15 0.0000000000000000000002094 104.0
CMS3_k127_101168_3 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1.086e-206 657.0
CMS3_k127_101168_30 Transcriptional regulator - - - 0.00000000000000000005693 101.0
CMS3_k127_101168_31 GvpD gas vesicle protein - - - 0.0000000000000002448 89.0
CMS3_k127_101168_32 DinB superfamily - - - 0.000000001077 66.0
CMS3_k127_101168_33 Galactose oxidase, central domain - - - 0.00008725 54.0
CMS3_k127_101168_4 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 542.0
CMS3_k127_101168_5 Aminotransferase class-V K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 537.0
CMS3_k127_101168_6 PFAM FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 501.0
CMS3_k127_101168_7 Alanine dehydrogenase/PNT, N-terminal domain K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004263 392.0
CMS3_k127_101168_8 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K11473 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005489 365.0
CMS3_k127_101168_9 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 354.0
CMS3_k127_1014068_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.556e-205 654.0
CMS3_k127_1014068_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.14 7.638e-200 634.0
CMS3_k127_1014068_10 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000156 286.0
CMS3_k127_1014068_11 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000006644 264.0
CMS3_k127_1014068_12 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001307 264.0
CMS3_k127_1014068_13 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000006293 246.0
CMS3_k127_1014068_14 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000004951 227.0
CMS3_k127_1014068_15 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000000000000000000000003609 211.0
CMS3_k127_1014068_16 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000000000000000000000000001653 200.0
CMS3_k127_1014068_17 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000001703 198.0
CMS3_k127_1014068_18 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000002133 182.0
CMS3_k127_1014068_19 Bifunctional nuclease K08999 - - 0.0000000000000000000000000000000000000000001489 166.0
CMS3_k127_1014068_2 Cell division protein FtsA K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004881 427.0
CMS3_k127_1014068_20 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000001261 162.0
CMS3_k127_1014068_21 Ndr family K01055 - 3.1.1.24 0.000000000000000000000000317 115.0
CMS3_k127_1014068_22 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000001147 107.0
CMS3_k127_1014068_23 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000003345 107.0
CMS3_k127_1014068_24 2-phosphosulpholactate phosphatase K05979 - 3.1.3.71 0.0000000000000000000002773 106.0
CMS3_k127_1014068_25 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000003441 96.0
CMS3_k127_1014068_26 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000002709 92.0
CMS3_k127_1014068_27 Bacterial protein of unknown function (DUF951) - - - 0.000000000000007242 85.0
CMS3_k127_1014068_28 response regulator K07667 - - 0.00000002345 64.0
CMS3_k127_1014068_29 DinB family - - - 0.0000003234 59.0
CMS3_k127_1014068_3 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 392.0
CMS3_k127_1014068_30 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.00000361 53.0
CMS3_k127_1014068_31 VanZ like family - - - 0.00002472 53.0
CMS3_k127_1014068_4 PFAM molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 381.0
CMS3_k127_1014068_5 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001833 388.0
CMS3_k127_1014068_6 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008608 363.0
CMS3_k127_1014068_7 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003666 338.0
CMS3_k127_1014068_8 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 332.0
CMS3_k127_1014068_9 Phosphotriesterase K07048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 299.0
CMS3_k127_1030361_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01317,K01925,K01928,K01932 - 3.4.21.10,6.3.2.13,6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 312.0
CMS3_k127_1030361_1 CobB/CobQ-like glutamine amidotransferase domain K07009 - - 0.00000000000000000000000000000000000000000000000000000000002473 216.0
CMS3_k127_1030361_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000002726 154.0
CMS3_k127_1030361_3 Peptidase, M23 - - - 0.0000000000000000000000000000000000000005674 160.0
CMS3_k127_1030361_4 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000002858 147.0
CMS3_k127_1030361_5 Glutaredoxin-like domain (DUF836) - - - 0.0000000003016 65.0
CMS3_k127_1043253_0 FAD linked oxidase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 584.0
CMS3_k127_1043253_1 dioxygenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000954 349.0
CMS3_k127_1043253_10 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000007141 126.0
CMS3_k127_1043253_11 Alpha beta hydrolase - - - 0.000000000000000000000114 108.0
CMS3_k127_1043253_12 Transcriptional regulator - - - 0.0000000000000000009516 102.0
CMS3_k127_1043253_13 PFAM Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000002826 91.0
CMS3_k127_1043253_14 Sulfite exporter TauE/SafE K07090 - - 0.00000000000002481 82.0
CMS3_k127_1043253_15 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0006326 49.0
CMS3_k127_1043253_2 potassium uptake protein, TrkH family K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000001695 254.0
CMS3_k127_1043253_3 haloacid dehalogenase K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000244 200.0
CMS3_k127_1043253_4 F5/8 type C domain - - - 0.000000000000000000000000000000000000000000001359 175.0
CMS3_k127_1043253_5 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000005117 173.0
CMS3_k127_1043253_6 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) - - - 0.000000000000000000000000000000000000008651 167.0
CMS3_k127_1043253_7 TrkA-C domain K03499 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000003386 145.0
CMS3_k127_1043253_8 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000001291 141.0
CMS3_k127_1043253_9 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K00082,K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000006958 127.0
CMS3_k127_1045833_0 Mur ligase family, glutamate ligase domain K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000392 179.0
CMS3_k127_1056589_0 ATPases associated with a variety of cellular activities K09820 - - 0.000000000000000000000000000000000000000000000000000000000000005081 226.0
CMS3_k127_1056589_1 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000005911 230.0
CMS3_k127_1056589_2 ABC 3 transport family K09819 - - 0.0000000000000000000000000000000000000000000000000000002823 206.0
CMS3_k127_1056589_3 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000523 173.0
CMS3_k127_1056589_4 Thioesterase superfamily - - - 0.000000000000000000000000000454 125.0
CMS3_k127_1056589_5 Ferric uptake regulator family K03711 - - 0.0000000000000000000000006074 111.0
CMS3_k127_1056589_6 transcriptional regulator - - - 0.000000000000000000001229 99.0
CMS3_k127_1056589_7 Domain of unknown function (DUF4442) - - - 0.000000005708 68.0
CMS3_k127_1056589_8 MaoC like domain - - - 0.0000006521 58.0
CMS3_k127_1057509_0 Aminotransferase class I and II K10206 GO:0003674,GO:0003824,GO:0008483,GO:0016740,GO:0016769 2.6.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 501.0
CMS3_k127_1057509_1 phosphoglycerate mutase K15635 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 424.0
CMS3_k127_1057509_10 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000001415 196.0
CMS3_k127_1057509_11 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000001278 169.0
CMS3_k127_1057509_12 major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000001815 171.0
CMS3_k127_1057509_13 NADPH-dependent FMN reductase K03809 - 1.6.5.2 0.0000000000000000000000000000000000000007447 164.0
CMS3_k127_1057509_14 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000005998 137.0
CMS3_k127_1057509_15 Alpha/beta hydrolase family - - - 0.00000000000000000000000000004584 128.0
CMS3_k127_1057509_16 PFAM Methyltransferase type - - - 0.000000000002876 78.0
CMS3_k127_1057509_17 Lrp/AsnC ligand binding domain - - - 0.00000001252 59.0
CMS3_k127_1057509_18 YCII-related domain - - - 0.000000015 60.0
CMS3_k127_1057509_19 FR47-like protein - - - 0.00007451 54.0
CMS3_k127_1057509_2 Belongs to the phosphoglycerate kinase family K00927 GO:0001871,GO:0002020,GO:0003674,GO:0003824,GO:0004618,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009893,GO:0009986,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0010755,GO:0010756,GO:0010954,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019222,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0030162,GO:0030193,GO:0030195,GO:0030246,GO:0030247,GO:0030312,GO:0031323,GO:0031325,GO:0032101,GO:0032102,GO:0032268,GO:0032270,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043532,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0045862,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050818,GO:0050819,GO:0050878,GO:0051171,GO:0051173,GO:0051186,GO:0051188,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051917,GO:0051919,GO:0055086,GO:0060255,GO:0061041,GO:0061045,GO:0065007,GO:0065008,GO:0070613,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0080134,GO:0090407,GO:1900046,GO:1900047,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903034,GO:1903035,GO:1903317,GO:1903319,GO:2001065 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007432 421.0
CMS3_k127_1057509_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006487 367.0
CMS3_k127_1057509_4 pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004531 359.0
CMS3_k127_1057509_5 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000001491 263.0
CMS3_k127_1057509_6 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000009013 244.0
CMS3_k127_1057509_7 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000004854 239.0
CMS3_k127_1057509_8 PFAM thiamine pyrophosphate protein domain protein TPP-binding K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000002591 219.0
CMS3_k127_1057509_9 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000004847 221.0
CMS3_k127_1061157_0 C-terminal, D2-small domain, of ClpB protein K03696 - - 0.0 1054.0
CMS3_k127_1061157_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 3.456e-198 640.0
CMS3_k127_1061157_10 Belongs to the SEDS family K05837 - - 0.00000000000000000000000000000000000000000000000000005158 202.0
CMS3_k127_1061157_11 COG NOG14600 non supervised orthologous group - - - 0.0000000000000000000000000000000000000000000001992 168.0
CMS3_k127_1061157_12 COG NOG15344 non supervised orthologous group - - - 0.00000000000000000000000000000000000000000000133 171.0
CMS3_k127_1061157_13 - - - - 0.0000000000000000000000000000000001355 136.0
CMS3_k127_1061157_14 Phosphoribosyl-AMP cyclohydrolase K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000001436 130.0
CMS3_k127_1061157_15 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000003459 130.0
CMS3_k127_1061157_16 COG NOG15344 non supervised orthologous group - - - 0.0000000000000000000000001324 109.0
CMS3_k127_1061157_17 - - - - 0.0000000000000000000000006511 105.0
CMS3_k127_1061157_18 - - - - 0.0000000000000000000003197 97.0
CMS3_k127_1061157_19 ORF located using Blastx - - - 0.0000000000000000000007112 97.0
CMS3_k127_1061157_2 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 404.0
CMS3_k127_1061157_20 HAD-superfamily hydrolase, subfamily IA K20862 - 3.1.3.102,3.1.3.104 0.000000000000000008068 91.0
CMS3_k127_1061157_21 - - - - 0.000000000000001182 82.0
CMS3_k127_1061157_22 - - - - 0.0000000000008017 68.0
CMS3_k127_1061157_23 - - - - 0.0000000002008 61.0
CMS3_k127_1061157_24 - - - - 0.000000007994 61.0
CMS3_k127_1061157_25 ORF located using Blastx - - - 0.00003569 48.0
CMS3_k127_1061157_26 - - - - 0.0001689 46.0
CMS3_k127_1061157_29 - - - - 0.0006651 43.0
CMS3_k127_1061157_3 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008833 370.0
CMS3_k127_1061157_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 350.0
CMS3_k127_1061157_5 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008152 325.0
CMS3_k127_1061157_6 PFAM RNA binding S1 domain protein K02945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 303.0
CMS3_k127_1061157_7 COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding K03426 - 3.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002837 286.0
CMS3_k127_1061157_8 TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000001322 244.0
CMS3_k127_1061157_9 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000721 234.0
CMS3_k127_1064165_0 Major Facilitator Superfamily - - - 0.000000000000000003081 96.0
CMS3_k127_1064165_1 TIGRFAM F420-dependent oxidoreductase K12234 - 6.3.2.31,6.3.2.34 0.0000000001903 61.0
CMS3_k127_1064878_0 ABC transporter ATPase permease K06147 - - 7.374e-234 738.0
CMS3_k127_1064878_1 ABC-type multidrug transport system ATPase and permease K06147,K06148 - - 9.272e-226 715.0
CMS3_k127_1064878_10 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides - - - 0.0000000005276 74.0
CMS3_k127_1064878_11 Cytidylate kinase-like family - - - 0.00000001146 64.0
CMS3_k127_1064878_12 transmembrane transport K02532,K05820,K08167,K08218,K08369 - - 0.0000008019 62.0
CMS3_k127_1064878_2 Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008856 564.0
CMS3_k127_1064878_3 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006064 249.0
CMS3_k127_1064878_4 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006686 258.0
CMS3_k127_1064878_5 aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005569 254.0
CMS3_k127_1064878_6 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000002217 228.0
CMS3_k127_1064878_7 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate - - - 0.00000000000000000000001936 108.0
CMS3_k127_1064878_8 translation initiation factor activity K06996 - - 0.00000000001935 68.0
CMS3_k127_1064878_9 dehydratase - - - 0.0000000003005 72.0
CMS3_k127_1069404_0 Amidohydrolase family K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000004268 259.0
CMS3_k127_1069404_1 Sterol carrier protein domain - - - 0.0000000000000000000000000000000000000007841 166.0
CMS3_k127_1069404_2 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.0000000000000000000000000000000000008841 147.0
CMS3_k127_1069404_3 Acetyl-CoA acetyltransferase - - - 0.000000000000000000000000000007774 119.0
CMS3_k127_1097860_0 Copper amine oxidase, enzyme domain K00276 - 1.4.3.21 6.332e-203 654.0
CMS3_k127_1097860_1 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007372 513.0
CMS3_k127_1097860_2 Luciferase-like monooxygenase K14733 - 1.14.13.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 336.0
CMS3_k127_1097860_3 Cytochrome P450 K00493 - 1.14.14.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 329.0
CMS3_k127_1097860_4 Major intrinsic protein K02440 - - 0.000000000000000000000000000000000000000000000000000000000000000000007482 254.0
CMS3_k127_1097860_5 FR47-like protein - - - 0.0000000000000000000000000000000000000000006245 168.0
CMS3_k127_1097860_6 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.000000000000000000000000000000000000000004537 166.0
CMS3_k127_1097860_7 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000001759 126.0
CMS3_k127_1097860_8 protein conserved in bacteria - - - 0.0000002568 62.0
CMS3_k127_1106145_0 PFAM DAHP synthetase I KDSA K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 416.0
CMS3_k127_1106145_1 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000002346 267.0
CMS3_k127_1106145_2 TIGRFAM riboflavin biosynthesis protein RibF K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000003004 245.0
CMS3_k127_1106145_3 PFAM Chorismate mutase of the AroH class K06208 - 5.4.99.5 0.000000000000000000000000000000000000002597 149.0
CMS3_k127_1106145_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000002308 151.0
CMS3_k127_1106145_5 CAAX protease self-immunity K07052 - - 0.000009517 57.0
CMS3_k127_1117070_0 acetyl-coa acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004398 510.0
CMS3_k127_1117070_1 lactoylglutathione lyase activity K05606 - 5.1.99.1 0.00000000000000000005365 91.0
CMS3_k127_1150756_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004837 431.0
CMS3_k127_1150756_1 oxidation-reduction process - - - 0.000000000000000001709 99.0
CMS3_k127_1167508_0 Acyl-CoA dehydrogenase, middle domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006148 433.0
CMS3_k127_1167508_1 Protein of unknown function (DUF2867) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004961 372.0
CMS3_k127_1167508_10 CoA-transferase family III - - - 0.000000000000000000000000000000009726 131.0
CMS3_k127_1167508_11 phosphinothricin N-acetyltransferase activity - - - 0.00000000000000000000000009536 119.0
CMS3_k127_1167508_12 ThiS family - - - 0.00000000000000306 80.0
CMS3_k127_1167508_2 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 350.0
CMS3_k127_1167508_3 Winged helix DNA-binding domain K09927 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 327.0
CMS3_k127_1167508_4 protein related to plant photosystem II stability assembly factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 322.0
CMS3_k127_1167508_5 Domain of unknown function (DUF1731) K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003449 289.0
CMS3_k127_1167508_6 SRPBCC domain-containing protein - - - 0.00000000000000000000000000000000000000000000000185 179.0
CMS3_k127_1167508_7 Protein of unknown function (DUF2867) - - - 0.000000000000000000000000000000000000000003896 158.0
CMS3_k127_1167508_8 carboxylic ester hydrolase activity - - - 0.00000000000000000000000000000000000000009473 166.0
CMS3_k127_1167508_9 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000000000000000002817 164.0
CMS3_k127_1169678_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 7.183e-222 704.0
CMS3_k127_1169678_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 492.0
CMS3_k127_1169678_10 PFAM Inositol monophosphatase K01092,K05602 - 3.1.3.15,3.1.3.25 0.0000000000000000000000000000000000000000000000000000000003776 213.0
CMS3_k127_1169678_11 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000002685 166.0
CMS3_k127_1169678_12 Removes 5-oxoproline from various penultimate amino acid residues except L-proline K01304 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0071704,GO:1901564 3.4.19.3 0.0000000000000000000000000000000000000000003655 164.0
CMS3_k127_1169678_13 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.00000000000000000000000000000006818 135.0
CMS3_k127_1169678_14 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87 0.0000000000000000000000000005137 123.0
CMS3_k127_1169678_15 NUDIX domain - - - 0.00000000000000000000002285 102.0
CMS3_k127_1169678_16 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000001437 98.0
CMS3_k127_1169678_17 Cupin domain - - - 0.000000000000001477 83.0
CMS3_k127_1169678_2 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004086 426.0
CMS3_k127_1169678_3 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 423.0
CMS3_k127_1169678_4 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006937 405.0
CMS3_k127_1169678_5 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006175 324.0
CMS3_k127_1169678_6 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 308.0
CMS3_k127_1169678_7 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005017 303.0
CMS3_k127_1169678_8 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000004394 222.0
CMS3_k127_1169678_9 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000002668 226.0
CMS3_k127_1171668_0 Amidohydrolase K03392,K22213 - 4.1.1.45,4.1.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006157 315.0
CMS3_k127_1171668_1 Enoyl-(Acyl carrier protein) reductase K19548 - 1.1.1.385 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006474 290.0
CMS3_k127_1171668_2 Amidohydrolase K07045 - - 0.000126 52.0
CMS3_k127_1175919_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006258 549.0
CMS3_k127_1175919_1 PFAM NADH Ubiquinone plastoquinone (complex I) K00341 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006902 471.0
CMS3_k127_1175919_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000003342 121.0
CMS3_k127_1175919_11 N-terminal half of MaoC dehydratase - - - 0.000000000000000000000000195 115.0
CMS3_k127_1175919_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000003097 98.0
CMS3_k127_1175919_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 - 1.6.5.3 0.0000000000000000003991 98.0
CMS3_k127_1175919_14 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000042 96.0
CMS3_k127_1175919_15 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000001087 75.0
CMS3_k127_1175919_16 MaoC like domain - - - 0.000000000005112 74.0
CMS3_k127_1175919_17 protein, possibly involved in aromatic compounds catabolism - - - 0.00000000001609 71.0
CMS3_k127_1175919_18 Fe-S assembly protein IscX - - - 0.00000000005825 64.0
CMS3_k127_1175919_2 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342,K05575 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 435.0
CMS3_k127_1175919_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009772 366.0
CMS3_k127_1175919_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004473 312.0
CMS3_k127_1175919_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007335 296.0
CMS3_k127_1175919_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000001141 205.0
CMS3_k127_1175919_7 COG0346 Lactoylglutathione lyase and related lyases - - - 0.0000000000000000000000000000000000000000004203 162.0
CMS3_k127_1175919_8 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000007813 148.0
CMS3_k127_1175919_9 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000001082 136.0
CMS3_k127_1178168_0 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000003597 162.0
CMS3_k127_1178168_1 COG0477 Permeases of the major facilitator superfamily - - - 0.000000000000000000000001411 119.0
CMS3_k127_1178168_2 quinone binding - - - 0.00000000000000000000000253 108.0
CMS3_k127_1178168_3 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000003372 108.0
CMS3_k127_1178168_4 Cytidylate kinase-like family - - - 0.000000000000005181 85.0
CMS3_k127_1178168_5 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.000001624 53.0
CMS3_k127_1178168_6 COG0477 Permeases of the major facilitator superfamily - - - 0.0006047 49.0
CMS3_k127_1190544_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000001067 228.0
CMS3_k127_1190544_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000001227 207.0
CMS3_k127_1190544_2 helix_turn_helix, Lux Regulon K02479 - - 0.00000000000000000000000000000000000000003898 168.0
CMS3_k127_1190544_3 nitrous-oxide reductase activity - - - 0.00000000000000000000000000000000004041 141.0
CMS3_k127_1252402_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 7.718e-282 906.0
CMS3_k127_1252402_1 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 408.0
CMS3_k127_1252402_10 ATP-dependent protease La (LON) substrate-binding domain K01338,K07157 - 3.4.21.53 0.00000000000000000000000000007199 124.0
CMS3_k127_1252402_11 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K13819 - - 0.0000000000000000000000000003566 119.0
CMS3_k127_1252402_12 PFAM Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000007224 118.0
CMS3_k127_1252402_13 MobA-related protein K07141,K19190 - 1.1.1.328,2.7.7.76 0.000000000000000000000006824 109.0
CMS3_k127_1252402_14 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000001128 107.0
CMS3_k127_1252402_15 Rhodanese Homology Domain - - - 0.000000000000000007071 87.0
CMS3_k127_1252402_16 PFAM Haloacid dehalogenase domain protein hydrolase K07025 - - 0.00000000000001916 88.0
CMS3_k127_1252402_17 Beta-lactamase superfamily domain - - - 0.0000000000002283 80.0
CMS3_k127_1252402_18 histidine kinase A domain protein K02482 - 2.7.13.3 0.00000002375 66.0
CMS3_k127_1252402_19 Acetyltransferase (GNAT) family - - - 0.0000003741 62.0
CMS3_k127_1252402_2 D-isomer specific 2-hydroxyacid dehydrogenase K00015,K00090 - 1.1.1.215,1.1.1.26,1.1.1.79,1.1.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 342.0
CMS3_k127_1252402_20 PFAM AhpC TSA family K03564 - 1.11.1.15 0.000000713 53.0
CMS3_k127_1252402_21 NIMA (never in mitosis gene a)-related kinase 1 K08857,K20877 GO:0008150,GO:0030100,GO:0032501,GO:0032879,GO:0042303,GO:0045807,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0060627,GO:0065007 2.7.11.1 0.000003899 48.0
CMS3_k127_1252402_22 Belongs to the metal hydrolase YfiT family - - - 0.00009355 52.0
CMS3_k127_1252402_3 Formate dehydrogenase subunit alpha K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000001886 284.0
CMS3_k127_1252402_4 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000004268 242.0
CMS3_k127_1252402_5 synthetase (ADP forming), alpha K01905,K09181,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000207 229.0
CMS3_k127_1252402_6 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000003245 194.0
CMS3_k127_1252402_7 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000001749 184.0
CMS3_k127_1252402_8 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.00000000000000000000000000000000000003425 153.0
CMS3_k127_1252402_9 Protein of unknown function (DUF429) - - - 0.000000000000000000000000000000000142 145.0
CMS3_k127_1293595_0 Pterin binding enzyme K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007274 285.0
CMS3_k127_1293595_1 TIGRFAM 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.000000000000000000000000000001745 125.0
CMS3_k127_1293595_2 Belongs to the peptidase S8 family K13735,K20276,K21449 - - 0.0000009629 57.0
CMS3_k127_1293595_3 C-terminal domain of CHU protein family - - - 0.0001028 54.0
CMS3_k127_129707_0 Belongs to the DegT DnrJ EryC1 family K19715 - 2.6.1.109 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 454.0
CMS3_k127_129707_1 Oxidoreductase family, C-terminal alpha/beta domain K00010 - 1.1.1.18,1.1.1.369 0.000000000000000000000000000000000000000556 167.0
CMS3_k127_1301554_0 Elongator protein 3, MiaB family, Radical SAM - - - 2.347e-198 638.0
CMS3_k127_1301554_1 Methyltransferase type - - - 0.000000000000000000000000000000002019 136.0
CMS3_k127_1301554_2 Nucleotidyltransferase domain - - - 0.0000000000000000000000000001098 132.0
CMS3_k127_1321200_0 Epoxide hydrolase 2 K08726,K10089 GO:0000287,GO:0001676,GO:0002532,GO:0002538,GO:0002539,GO:0003008,GO:0003013,GO:0003018,GO:0003674,GO:0003824,GO:0004301,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005782,GO:0005829,GO:0006082,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006633,GO:0006690,GO:0006725,GO:0006793,GO:0006796,GO:0006805,GO:0006810,GO:0006873,GO:0006874,GO:0006875,GO:0006886,GO:0006950,GO:0006952,GO:0006954,GO:0006996,GO:0007031,GO:0007600,GO:0008015,GO:0008104,GO:0008150,GO:0008152,GO:0008217,GO:0008610,GO:0009056,GO:0009058,GO:0009410,GO:0009636,GO:0009810,GO:0009893,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0015031,GO:0015643,GO:0015833,GO:0016043,GO:0016053,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016801,GO:0016803,GO:0017144,GO:0018904,GO:0019216,GO:0019218,GO:0019222,GO:0019233,GO:0019369,GO:0019373,GO:0019439,GO:0019725,GO:0019752,GO:0030003,GO:0030258,GO:0031907,GO:0031974,GO:0032501,GO:0032787,GO:0033036,GO:0033365,GO:0033559,GO:0034613,GO:0035150,GO:0035296,GO:0042221,GO:0042577,GO:0042578,GO:0042579,GO:0042592,GO:0042632,GO:0042759,GO:0042802,GO:0042803,GO:0042886,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043574,GO:0043651,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045777,GO:0046272,GO:0046394,GO:0046483,GO:0046839,GO:0046872,GO:0046907,GO:0046983,GO:0048518,GO:0048878,GO:0050789,GO:0050801,GO:0050877,GO:0050880,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055088,GO:0055092,GO:0060255,GO:0062012,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0070887,GO:0071466,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072330,GO:0072503,GO:0072507,GO:0072593,GO:0072594,GO:0072662,GO:0072663,GO:0080090,GO:0090066,GO:0090181,GO:0097176,GO:0097746,GO:0097755,GO:0098771,GO:1900673,GO:1901360,GO:1901361,GO:1901568,GO:1901575,GO:1901576 3.1.3.76,3.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 385.0
CMS3_k127_1321200_1 Limonene-1,2-epoxide hydrolase - - - 0.000000000000000000000000000000000000000003121 158.0
CMS3_k127_1321200_10 Activator of Hsp90 ATPase - - - 0.00000000000432 70.0
CMS3_k127_1321200_2 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000003376 167.0
CMS3_k127_1321200_3 Cupin domain - - - 0.0000000000000000000000000000000000002343 148.0
CMS3_k127_1321200_4 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000007999 121.0
CMS3_k127_1321200_5 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000001456 122.0
CMS3_k127_1321200_6 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000002178 105.0
CMS3_k127_1321200_7 Transmembrane secretion effector - - - 0.000000000000000000001869 108.0
CMS3_k127_1321200_8 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000001321 89.0
CMS3_k127_1321200_9 transcriptional regulator domain protein - - - 0.0000000000000003545 87.0
CMS3_k127_1321328_0 DegT/DnrJ/EryC1/StrS aminotransferase family K04127 - 5.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006063 450.0
CMS3_k127_1321328_1 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000005334 254.0
CMS3_k127_1321328_2 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000001463 228.0
CMS3_k127_1321328_3 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000003447 167.0
CMS3_k127_1321328_4 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000001647 162.0
CMS3_k127_1321328_5 lipolytic protein G-D-S-L family - - - 0.000000000002367 81.0
CMS3_k127_133435_0 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 0.000000000000000000000001047 105.0
CMS3_k127_133435_1 Periplasmic component of amino acid ABC-type transporter signal transduction system K02030 - - 0.0000003356 63.0
CMS3_k127_1383652_0 Threonine synthase K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009243 354.0
CMS3_k127_1383652_1 N-acyl-D-aspartate D-glutamate deacylase K06015 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.5.1.81 0.0000000000000000000000000000000000000000000000006057 184.0
CMS3_k127_1386488_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000001782 142.0
CMS3_k127_1413154_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.391e-224 713.0
CMS3_k127_1413154_1 pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for K15987 - 3.6.1.1 1.751e-206 662.0
CMS3_k127_1413154_10 Regulatory protein, FmdB family - - - 0.00000001294 62.0
CMS3_k127_1413154_11 Membrane - GO:0000003,GO:0000910,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0019954,GO:0022402,GO:0022414,GO:0032505,GO:0043093,GO:0044464,GO:0051301,GO:0071944 - 0.00000003906 64.0
CMS3_k127_1413154_2 Protein of unknown function (DUF1385) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002109 260.0
CMS3_k127_1413154_3 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000001976 184.0
CMS3_k127_1413154_4 Domain of unknown function (DUF4395) - - - 0.000000000000000000000000000000002014 134.0
CMS3_k127_1413154_5 Ribosomal L27 protein K02899 - - 0.00000000000000000000000000000008519 126.0
CMS3_k127_1413154_6 Binds the 23S rRNA K02909 - - 0.000000000000000000000000002596 114.0
CMS3_k127_1413154_7 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000001412 113.0
CMS3_k127_1413154_8 Uncharacterised protein family UPF0102 K07460 - - 0.0000000000000000000002871 101.0
CMS3_k127_1413154_9 isomerase activity K01821 - 5.3.2.6 0.000000008228 59.0
CMS3_k127_1432275_0 Belongs to the aldehyde dehydrogenase family K13821 - 1.2.1.88,1.5.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 609.0
CMS3_k127_1432275_1 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.00000000000000000000000000001759 126.0
CMS3_k127_1432275_2 Cupin 2, conserved barrel domain protein - - - 0.0000000000004482 76.0
CMS3_k127_1432275_3 Cupin 2, conserved barrel domain protein - - - 0.000000003202 60.0
CMS3_k127_1432275_4 Acetyltransferase (GNAT) family - - - 0.000004136 57.0
CMS3_k127_1436418_0 ThiF family K03148,K03636,K21029,K21147 - 2.7.7.73,2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 430.0
CMS3_k127_1436418_1 Pyridoxal-phosphate dependent enzyme K01883,K12339,K21148 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0032991,GO:0033847,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.113,2.5.1.47,6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008913 380.0
CMS3_k127_1436418_2 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004824 375.0
CMS3_k127_1436418_3 TIGRFAM MoaD family protein K03636 - - 0.000000000000000000000001041 109.0
CMS3_k127_1436418_4 Transcriptional regulator - - - 0.000000000000001748 81.0
CMS3_k127_1436418_5 Transcriptional regulator - - - 0.00004456 48.0
CMS3_k127_153324_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000002151 238.0
CMS3_k127_153324_1 dehydratase - - - 0.0000000000000000000000000000007303 124.0
CMS3_k127_153324_2 - - - - 0.0000002364 63.0
CMS3_k127_15974_0 PFAM aminotransferase, class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000001148 247.0
CMS3_k127_15974_1 - - - - 0.0000000000001346 79.0
CMS3_k127_15974_2 CoA-transferase family III - - - 0.00000000001318 67.0
CMS3_k127_1605568_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000362 533.0
CMS3_k127_1605568_1 Peptidase C26 K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000001166 262.0
CMS3_k127_1605568_2 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.000000000000000000000000000000000000000002779 171.0
CMS3_k127_1605568_3 helix_turn_helix, Lux Regulon - - - 0.000000001858 61.0
CMS3_k127_1605568_4 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00002914 55.0
CMS3_k127_1605568_5 DinB superfamily - - - 0.00009057 54.0
CMS3_k127_163238_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 520.0
CMS3_k127_163238_1 SMART CBS domain containing protein K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 406.0
CMS3_k127_163238_2 protein related to plant photosystem II stability assembly factor - - - 0.00000000000000000000000000000000000000000000000000000000000000417 235.0
CMS3_k127_163238_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000001573 113.0
CMS3_k127_163238_4 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000005451 111.0
CMS3_k127_163238_5 Protein of unknown function (DUF664) - - - 0.000000000002581 75.0
CMS3_k127_163238_6 Activator of Hsp90 ATPase - - - 0.000000004842 61.0
CMS3_k127_163238_7 SnoaL-like domain - - - 0.00003853 52.0
CMS3_k127_1695728_0 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 573.0
CMS3_k127_1695728_1 TIGRFAM type I secretion membrane fusion protein, HlyD K02022,K11003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009195 484.0
CMS3_k127_1695728_2 Haemolysin-type calcium binding protein related domain K01406 - 3.4.24.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000395 440.0
CMS3_k127_1695728_3 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001311 254.0
CMS3_k127_1695728_4 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000007941 139.0
CMS3_k127_17032_0 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 351.0
CMS3_k127_17032_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004524 348.0
CMS3_k127_17032_10 Phage shock protein C, PspC - - - 0.0003824 50.0
CMS3_k127_17032_2 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007554 323.0
CMS3_k127_17032_3 ubiE/COQ5 methyltransferase family K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000008646 231.0
CMS3_k127_17032_4 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000001663 180.0
CMS3_k127_17032_5 aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000006274 181.0
CMS3_k127_17032_6 FeoA K01356,K03709 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005506,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006355,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008198,GO:0008270,GO:0009058,GO:0009237,GO:0009712,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0016151,GO:0018958,GO:0019184,GO:0019219,GO:0019222,GO:0019290,GO:0019540,GO:0019748,GO:0030145,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0034641,GO:0040007,GO:0043043,GO:0043167,GO:0043169,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0044550,GO:0045892,GO:0045934,GO:0046870,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0050897,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 3.4.21.88 0.000000000000000000000000000000111 135.0
CMS3_k127_17032_7 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000001803 110.0
CMS3_k127_17032_8 Cell wall-active antibiotics response 4TMS YvqF K11622 - - 0.00000000003552 71.0
CMS3_k127_17032_9 MacB-like periplasmic core domain K02004 - - 0.000000143 62.0
CMS3_k127_1708243_0 COG0778 Nitroreductase - - - 0.0000000000000000000000006028 114.0
CMS3_k127_1708243_1 Sigma-70, region 4 K03088 - - 0.00000002884 63.0
CMS3_k127_1708243_2 PDZ domain (Also known as DHR or GLGF) - - - 0.00001958 57.0
CMS3_k127_1736864_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 3.015e-220 711.0
CMS3_k127_1736864_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835,K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 422.0
CMS3_k127_1736864_2 histidyl-tRNA aminoacylation K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 380.0
CMS3_k127_1736864_3 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218,K03437 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000007544 237.0
CMS3_k127_1736864_4 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.000000000000000000000000000000000000000000000002366 189.0
CMS3_k127_1736864_5 IMP dehydrogenase / GMP reductase domain K00088 - 1.1.1.205 0.000000000000000000000000000000007445 129.0
CMS3_k127_1736864_6 VanW like protein K18346 - - 0.000000000000000000000002066 116.0
CMS3_k127_176743_0 Acyl-CoA dehydrogenase, middle domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005345 407.0
CMS3_k127_176743_1 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 360.0
CMS3_k127_176743_2 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 331.0
CMS3_k127_176743_3 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000218 251.0
CMS3_k127_176743_4 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000005175 240.0
CMS3_k127_176743_5 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.000000000000000000000000000000000000000000000000000000000009375 221.0
CMS3_k127_176743_6 luxR family - - - 0.000000000000000000000000000000000000000005934 167.0
CMS3_k127_176743_7 transcriptional regulator K22295 - - 0.000000000000000000000008585 109.0
CMS3_k127_176743_8 Putative Flp pilus-assembly TadE/G-like - - - 0.0000001781 63.0
CMS3_k127_177506_0 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000369 224.0
CMS3_k127_177506_1 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000007969 209.0
CMS3_k127_177506_2 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000004225 184.0
CMS3_k127_177506_3 III protein, CoA-transferase family - - - 0.000000000000000000000001285 115.0
CMS3_k127_177506_4 Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family K00561 - 2.1.1.184 0.0000000000000001275 87.0
CMS3_k127_181465_0 cyclic 2,3-diphosphoglycerate synthetase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008616 544.0
CMS3_k127_181465_1 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004116 359.0
CMS3_k127_181465_2 Amino acid kinase family K00926 - 2.7.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000001363 258.0
CMS3_k127_181465_3 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.000000000003044 74.0
CMS3_k127_1827119_0 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 289.0
CMS3_k127_1827119_1 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002205 267.0
CMS3_k127_1827119_2 PFAM NAD-dependent epimerase dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004782 260.0
CMS3_k127_1827119_3 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000997 219.0
CMS3_k127_1827119_4 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000001857 160.0
CMS3_k127_1827119_5 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000003982 149.0
CMS3_k127_1827119_6 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03547 - - 0.0000000000000000000000000002001 127.0
CMS3_k127_1827119_7 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000002547 89.0
CMS3_k127_1827119_8 Pyridoxamine 5'-phosphate oxidase - - - 0.000000005922 64.0
CMS3_k127_182714_0 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005666 376.0
CMS3_k127_182714_1 carboxylic ester hydrolase activity K03929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 363.0
CMS3_k127_182714_10 dehydratase - - - 0.000000000000000114 90.0
CMS3_k127_182714_11 Uncharacterised protein, DegV family COG1307 - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000003853 78.0
CMS3_k127_182714_12 - - - - 0.0001164 46.0
CMS3_k127_182714_2 Enoyl-(Acyl carrier protein) reductase K00059,K18335 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 321.0
CMS3_k127_182714_3 NAD dependent epimerase/dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006797 295.0
CMS3_k127_182714_4 PFAM CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001685 279.0
CMS3_k127_182714_5 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001601 260.0
CMS3_k127_182714_6 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.00000000000000000000000000000000000000000000002373 181.0
CMS3_k127_182714_7 Beta-lactamase - - - 0.0000000000000000000000000000000000000000001362 169.0
CMS3_k127_182714_8 Major facilitator superfamily - - - 0.000000000000000000000000000000006038 146.0
CMS3_k127_182714_9 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000002579 121.0
CMS3_k127_18515_0 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005388 325.0
CMS3_k127_18515_10 Anti-sigma-K factor rskA - GO:0000988,GO:0000989,GO:0003674,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006417,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0010608,GO:0016020,GO:0016989,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0032268,GO:0034248,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0051252,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141 - 0.0000000001477 72.0
CMS3_k127_18515_11 SnoaL-like polyketide cyclase - - - 0.0000000001926 70.0
CMS3_k127_18515_12 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0000275 57.0
CMS3_k127_18515_13 Cytochrome c K03889 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00004045 52.0
CMS3_k127_18515_14 Esterase PHB depolymerase - - - 0.0003375 53.0
CMS3_k127_18515_15 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.0008408 52.0
CMS3_k127_18515_2 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001401 239.0
CMS3_k127_18515_3 cytochrome p450 - - - 0.00000000000000000000000000000000000000001758 168.0
CMS3_k127_18515_4 NADPH quinone reductase K00344 - 1.6.5.5 0.00000000000000000000000000000000000003987 153.0
CMS3_k127_18515_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000004141 123.0
CMS3_k127_18515_6 PAS domain - - - 0.0000000000000000000000000001502 120.0
CMS3_k127_18515_7 SnoaL-like polyketide cyclase - - - 0.0000000000000000001135 94.0
CMS3_k127_18515_8 membrane-bound metal-dependent - - - 0.00000000000002886 84.0
CMS3_k127_18515_9 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000005191 76.0
CMS3_k127_185944_0 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000003738 225.0
CMS3_k127_185944_1 domain, Protein K03980,K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000001885 204.0
CMS3_k127_1864166_0 FMN-dependent dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 419.0
CMS3_k127_1864166_1 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000003528 165.0
CMS3_k127_1911469_0 Domain of unknown function (DUF3552) K18682 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 510.0
CMS3_k127_1911469_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 447.0
CMS3_k127_1911469_10 Type IV pilus biogenesis stability protein PilW - - - 0.0000000000000912 84.0
CMS3_k127_1911469_11 YGGT family K02221 - - 0.0000000000006248 72.0
CMS3_k127_1911469_12 Belongs to the UPF0235 family - - - 0.0000000000007641 74.0
CMS3_k127_1911469_13 regulation of DNA repair K03565 GO:0003674,GO:0005575,GO:0005623,GO:0005886,GO:0006282,GO:0008150,GO:0016020,GO:0019219,GO:0019222,GO:0030234,GO:0031323,GO:0044464,GO:0048583,GO:0050789,GO:0050790,GO:0050794,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0065009,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0098772,GO:2001020 - 0.000000000004841 74.0
CMS3_k127_1911469_14 Pyridoxamine 5'-phosphate oxidase - - - 0.00000008592 59.0
CMS3_k127_1911469_2 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003671 448.0
CMS3_k127_1911469_3 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005506 430.0
CMS3_k127_1911469_4 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005098 266.0
CMS3_k127_1911469_5 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000000000008361 243.0
CMS3_k127_1911469_6 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000000000000000000000000000000000000000000000000001322 214.0
CMS3_k127_1911469_7 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000002047 205.0
CMS3_k127_1911469_8 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000002212 187.0
CMS3_k127_1911469_9 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000003702 169.0
CMS3_k127_1921007_0 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007037 503.0
CMS3_k127_1921007_1 Acyl-CoA dehydrogenase, middle domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 359.0
CMS3_k127_1921007_2 enoyl-CoA hydratase isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 329.0
CMS3_k127_1921007_3 COG0657 Esterase lipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001139 282.0
CMS3_k127_1921007_4 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000002729 212.0
CMS3_k127_1921007_5 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000166 162.0
CMS3_k127_1921007_6 MOSC domain - - - 0.0000000000000000000000000000000000005005 146.0
CMS3_k127_1921007_7 NYN domain - - - 0.000000000000000000000000000000002753 138.0
CMS3_k127_1921007_8 Transcriptional regulator PadR-like family - - - 0.00000000000000000000004759 107.0
CMS3_k127_1921007_9 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000001437 89.0
CMS3_k127_1922591_0 Acetyl-CoA acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 488.0
CMS3_k127_1922591_1 Binding-protein-dependent transport systems inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000296 454.0
CMS3_k127_1922591_2 iron ion homeostasis K02012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 375.0
CMS3_k127_1922591_3 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010,K02052 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 338.0
CMS3_k127_1922591_4 retrograde transport, endosome to Golgi K07095 - - 0.0000000000000000000000000000000000000000002669 166.0
CMS3_k127_1922591_5 Belongs to the ClpS family K06891 - - 0.00000000000000000000000000006312 119.0
CMS3_k127_1922591_6 DUF35 OB-fold domain, acyl-CoA-associated - - - 0.0000000000000000000000002653 121.0
CMS3_k127_1922591_7 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0005637 52.0
CMS3_k127_1929395_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein K00239,K00278 GO:0000104,GO:0000166,GO:0001539,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006113,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0022900,GO:0030030,GO:0030031,GO:0032991,GO:0033554,GO:0036094,GO:0040011,GO:0043167,GO:0043168,GO:0044085,GO:0044237,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044780,GO:0044781,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0048037,GO:0048870,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0070925,GO:0071840,GO:0071944,GO:0071949,GO:0071973,GO:0097159,GO:0097588,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363 1.3.5.1,1.3.5.4,1.4.3.16 8.555e-269 840.0
CMS3_k127_1929395_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 441.0
CMS3_k127_1929395_2 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005727 344.0
CMS3_k127_1929395_3 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000007206 228.0
CMS3_k127_1929395_4 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000001897 156.0
CMS3_k127_1929395_5 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.0000000000000000000000000000000000000175 153.0
CMS3_k127_1929395_6 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0009065 44.0
CMS3_k127_1956325_0 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 299.0
CMS3_k127_1956325_1 FtsX-like permease family K02004 - - 0.0000000000000000000001318 113.0
CMS3_k127_1967229_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 375.0
CMS3_k127_1967229_1 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000009646 251.0
CMS3_k127_1967229_2 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000000000000001691 160.0
CMS3_k127_1967229_3 type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis - - - 0.0006324 48.0
CMS3_k127_1969574_0 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 403.0
CMS3_k127_1969574_1 Belongs to the enoyl-CoA hydratase isomerase family K01692,K11264 - 4.1.1.41,4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005554 286.0
CMS3_k127_1969574_2 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000005601 240.0
CMS3_k127_1969574_3 III protein, CoA-transferase family - - - 0.00000000000000000000000000000000000000000000000000000001263 201.0
CMS3_k127_1969574_4 with the TIM-barrel fold - - - 0.00000000000000000000000000000000000000000000001234 190.0
CMS3_k127_1975915_0 fatty acid alpha-oxidation K12261 GO:0001561,GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005782,GO:0005829,GO:0006082,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0015031,GO:0015833,GO:0016042,GO:0016043,GO:0016054,GO:0016829,GO:0016830,GO:0019395,GO:0019752,GO:0019842,GO:0022607,GO:0030258,GO:0030976,GO:0031907,GO:0031974,GO:0032787,GO:0033036,GO:0033365,GO:0034440,GO:0034613,GO:0036094,GO:0042579,GO:0042802,GO:0042886,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043574,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046395,GO:0046907,GO:0048037,GO:0050662,GO:0051179,GO:0051234,GO:0051259,GO:0051641,GO:0051649,GO:0055114,GO:0065003,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072329,GO:0072594,GO:0072662,GO:0072663,GO:0097159,GO:1901363,GO:1901575,GO:1901681 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007875 569.0
CMS3_k127_1975915_1 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004646 432.0
CMS3_k127_1975915_2 ATPase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 348.0
CMS3_k127_1975915_3 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006805 274.0
CMS3_k127_1975915_4 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000001445 243.0
CMS3_k127_1975915_5 Belongs to the UPF0301 (AlgH) family K07735 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000006029 182.0
CMS3_k127_1975915_6 retrograde transport, endosome to Golgi K07095 - - 0.0000000000000000000000003757 113.0
CMS3_k127_1975915_7 L-carnitine dehydratase bile acid-inducible protein F K18702 - 2.8.3.19 0.00000000000002643 75.0
CMS3_k127_1975915_8 oxidoreductase K06940 - - 0.000000000002121 78.0
CMS3_k127_1975915_9 Peptidase S24-like K13280 - 3.4.21.89 0.00001407 57.0
CMS3_k127_1976633_0 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 499.0
CMS3_k127_1976633_1 acetyl-coa acetyltransferase K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 366.0
CMS3_k127_1976633_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K03851,K15372 - 2.6.1.55,2.6.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 362.0
CMS3_k127_1976633_3 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007049 299.0
CMS3_k127_1976633_4 FR47-like protein - - - 0.00000000000000000000000000000000000000000000004635 183.0
CMS3_k127_1976633_5 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.0000000000000000000000001537 112.0
CMS3_k127_1977423_0 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001142 268.0
CMS3_k127_1977423_1 histidine kinase, dimerisation and phosphoacceptor region K02480 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000003366 250.0
CMS3_k127_1977423_2 Two component transcriptional regulator, LuxR family - - - 0.00000000000000000000000000000000000000000000000000587 197.0
CMS3_k127_1977423_3 PFAM Adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000000000000000000000000000000000000215 168.0
CMS3_k127_1977423_4 PAS domain - - - 0.000000000000000000000008365 106.0
CMS3_k127_1977423_5 belongs to the sigma-70 factor family - - - 0.0001153 52.0
CMS3_k127_1977861_0 inositol 2-dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 377.0
CMS3_k127_1977861_1 Phosphoinositide phospholipase C, Ca2+-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004257 381.0
CMS3_k127_1977861_2 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000004142 229.0
CMS3_k127_1977861_3 Amidase K02433 - 6.3.5.6,6.3.5.7 0.000000000004961 69.0
CMS3_k127_1979778_0 Evidence 2b Function of strongly homologous gene - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003393 368.0
CMS3_k127_1979778_1 Evidence 2b Function of strongly homologous gene - - - 0.00000000000000000000000000000000000000000000000000000000002725 216.0
CMS3_k127_1979909_0 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000004229 238.0
CMS3_k127_1979909_1 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000007056 130.0
CMS3_k127_1985974_0 Fructose-1,6-bisphosphate aldolase, class II K01624 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000009373 218.0
CMS3_k127_1985974_1 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000009652 198.0
CMS3_k127_1985974_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000003105 143.0
CMS3_k127_1985974_3 PFAM sigma-70 region 2 domain protein K03088 - - 0.0000000000000339 85.0
CMS3_k127_1986396_0 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000003906 231.0
CMS3_k127_1986396_1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000000000000004115 85.0
CMS3_k127_1988689_0 Catalyzes the attachment of glycine to tRNA(Gly) K01880 GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046983,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000418 539.0
CMS3_k127_1988689_1 PFAM Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000002004 200.0
CMS3_k127_1988689_2 3'-5' exonuclease activity K03547 - - 0.0000000000000000000000000000000007949 149.0
CMS3_k127_1988689_3 HD domain - - - 0.00000000000000000000000000000849 134.0
CMS3_k127_1988689_4 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 0.0000000000000000000000000803 106.0
CMS3_k127_1988689_5 Cyclic-di-AMP receptor - - - 0.000000000000000000000009317 108.0
CMS3_k127_1988689_6 Response regulator receiver domain protein K07694 - - 0.0001351 46.0
CMS3_k127_1991787_0 DNA alkylation repair enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002615 263.0
CMS3_k127_1991787_1 DSBA-like thioredoxin domain - - - 0.00000000000000000000008827 102.0
CMS3_k127_1991787_2 Acyl-CoA dehydrogenase type 2 - - - 0.00000000000000000002359 104.0
CMS3_k127_1991787_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0001036 50.0
CMS3_k127_2002056_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 1.323e-320 1000.0
CMS3_k127_2002056_1 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008205 314.0
CMS3_k127_2002056_2 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000002571 166.0
CMS3_k127_2002056_3 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000001392 168.0
CMS3_k127_2002056_4 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.00000000000000000000000000000000007499 142.0
CMS3_k127_2002056_5 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) - - - 0.00000000000000001182 94.0
CMS3_k127_2002056_6 Serine hydrolase (FSH1) K06889 - - 0.000000001176 68.0
CMS3_k127_2007420_0 L-carnitine dehydratase bile acid-inducible protein F - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 338.0
CMS3_k127_2007420_1 CoA-transferase family III K07543 - 2.8.3.15 0.0000000000000000000003217 107.0
CMS3_k127_2007420_2 HD domain - - - 0.0000000000003614 77.0
CMS3_k127_2007420_3 DinB family - - - 0.000001692 56.0
CMS3_k127_2008903_0 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 423.0
CMS3_k127_2008903_1 5'-3' exonuclease, C-terminal SAM fold - - - 0.00000000000000000000000000000000000000000000001606 174.0
CMS3_k127_2008903_2 Transmembrane secretion effector - - - 0.0000000000000000000000000000003166 138.0
CMS3_k127_2008903_3 Phosphoenolpyruvate synthase pyruvate phosphate K01007 - 2.7.9.2 0.0000000000000000000007395 109.0
CMS3_k127_202035_0 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000993 518.0
CMS3_k127_202035_1 Molybdopterin converting factor, small subunit K03636 - - 0.000000000000000000000000827 105.0
CMS3_k127_202035_2 NIL - - - 0.000000000000004317 85.0
CMS3_k127_2022863_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 2.928e-306 964.0
CMS3_k127_2022863_1 stress protein (general stress protein 26) - - - 0.000000000000000000000000000000000000000000003917 166.0
CMS3_k127_2022863_2 lactoylglutathione lyase activity - - - 0.000000000000000000003235 101.0
CMS3_k127_2023464_0 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003664 321.0
CMS3_k127_2023464_1 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004281 300.0
CMS3_k127_2023464_2 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.0000000000000000000000000000000000000000000000000000000000000000006179 243.0
CMS3_k127_2024722_0 ABC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000001541 237.0
CMS3_k127_2024722_1 Bacterial regulatory proteins, tetR family - - - 0.0000000000000005865 87.0
CMS3_k127_2034312_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 1.043e-222 711.0
CMS3_k127_2034312_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005279 614.0
CMS3_k127_2034312_10 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00001259 51.0
CMS3_k127_2034312_2 Biotin carboxylase C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007112 470.0
CMS3_k127_2034312_3 PFAM peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009134 426.0
CMS3_k127_2034312_4 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000826 383.0
CMS3_k127_2034312_5 TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit K02031,K15583 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007271 361.0
CMS3_k127_2034312_6 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000001725 177.0
CMS3_k127_2034312_7 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000004862 134.0
CMS3_k127_2034312_8 Matrixin - - - 0.0000000000002658 80.0
CMS3_k127_2034312_9 Biotin-requiring enzyme - - - 0.000000001173 66.0
CMS3_k127_2059482_0 PFAM Phage derived protein Gp49-like (DUF891) - - - 0.0000000000000000000000000000000000000003688 151.0
CMS3_k127_2059482_1 Helix-turn-helix XRE-family like proteins - - - 0.00000000000005093 75.0
CMS3_k127_2059482_2 PFAM transposase IS3 IS911 family protein K07497 - - 0.00000005951 65.0
CMS3_k127_2059716_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004956 447.0
CMS3_k127_2059716_1 Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000007493 217.0
CMS3_k127_2059716_2 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000001016 164.0
CMS3_k127_2059716_3 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000001368 135.0
CMS3_k127_2059716_4 activator of Hsp90 ATPase 1 family protein - - - 0.00000000000000000000000000001696 127.0
CMS3_k127_2059716_5 Domain of unknown function (DUF370) K09777 - - 0.00000000000000000001075 94.0
CMS3_k127_2059716_6 mRNA catabolic process - - - 0.0001834 50.0
CMS3_k127_2059716_7 helix_turn_helix, Lux Regulon - - - 0.0006882 51.0
CMS3_k127_2067767_0 Glycosyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 384.0
CMS3_k127_2067767_1 Na+/H+ antiporter 1 K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 357.0
CMS3_k127_2067767_10 L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000004275 230.0
CMS3_k127_2067767_11 CoA-transferase family III K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000003533 210.0
CMS3_k127_2067767_12 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.000000000000000000000000000000000000000000000000000002154 204.0
CMS3_k127_2067767_13 ATPase activity K01990,K02071,K06857,K16784,K16786 - 3.6.3.55 0.00000000000000000000000000000000000000000000000000000615 211.0
CMS3_k127_2067767_14 DUF1168 domain protein - - - 0.0000000000000000000000000000000000000001907 164.0
CMS3_k127_2067767_15 Sulfite exporter TauE/SafE - - - 0.000000000000000000000000000000000002367 153.0
CMS3_k127_2067767_16 Peptide methionine sulfoxide reductase K07304 - 1.8.4.11 0.0000000000000000000000000000000006607 145.0
CMS3_k127_2067767_17 Bacterial regulatory helix-turn-helix protein, lysR family K02019,K05772 - - 0.00000000000000000000002801 112.0
CMS3_k127_2067767_18 Putative regulatory protein - - - 0.00000006013 61.0
CMS3_k127_2067767_19 Domain of unknown function (DUF4170) - - - 0.00005963 48.0
CMS3_k127_2067767_2 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001291 282.0
CMS3_k127_2067767_20 KR domain - - - 0.0004119 48.0
CMS3_k127_2067767_3 COG3387 Glucoamylase and related glycosyl hydrolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001601 292.0
CMS3_k127_2067767_4 PBP superfamily domain K05772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009204 273.0
CMS3_k127_2067767_5 Acyl-CoA dehydrogenase, middle domain - GO:0000166,GO:0003674,GO:0005488,GO:0006066,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0006706,GO:0006707,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016125,GO:0016127,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043436,GO:0044110,GO:0044116,GO:0044117,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044403,GO:0044419,GO:0046164,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0051704,GO:0055114,GO:0071704,GO:0071949,GO:0072329,GO:0097159,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901615,GO:1901616,GO:1902652 - 0.000000000000000000000000000000000000000000000000000000000000000000000005762 258.0
CMS3_k127_2067767_6 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001145 248.0
CMS3_k127_2067767_7 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000003603 246.0
CMS3_k127_2067767_8 Binding-protein-dependent transport system inner membrane component K05773 - - 0.000000000000000000000000000000000000000000000000000000000000000001856 241.0
CMS3_k127_2067767_9 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.00000000000000000000000000000000000000000000000000000000000000006628 238.0
CMS3_k127_2069100_0 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 328.0
CMS3_k127_2069100_1 dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000001512 231.0
CMS3_k127_2069100_2 MaoC like domain - - - 0.000000000000000000000000000000000000000000000000000000000000002394 219.0
CMS3_k127_2069100_3 iron ion homeostasis K02012 - - 0.0000000000000000611 81.0
CMS3_k127_2069100_4 methyltransferase - - - 0.0000000002478 72.0
CMS3_k127_2073155_0 gamma-glutamylcyclotransferase activity K00682 GO:0002376,GO:0003674,GO:0003824,GO:0003839,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0007599,GO:0008150,GO:0009611,GO:0016829,GO:0016840,GO:0016842,GO:0032501,GO:0042060,GO:0042381,GO:0045087,GO:0050817,GO:0050878,GO:0050896,GO:0065007,GO:0065008 4.3.2.9 0.000000000000000000000000000004799 124.0
CMS3_k127_2073155_1 COG1653 ABC-type sugar transport system, periplasmic component - - - 0.000000000000000000000000000006894 136.0
CMS3_k127_2083831_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 GO:0000287,GO:0003674,GO:0003824,GO:0003916,GO:0003917,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0009892,GO:0010605,GO:0016020,GO:0016853,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031324,GO:0032069,GO:0032074,GO:0040007,GO:0043086,GO:0043167,GO:0043169,GO:0044092,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0046872,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0060255,GO:0060700,GO:0060701,GO:0065007,GO:0065009,GO:0071944,GO:0080090,GO:0140097 5.99.1.2 9.904e-302 951.0
CMS3_k127_2083831_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 488.0
CMS3_k127_2083831_2 DNA recombination-mediator protein A K03168,K04096 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004382 351.0
CMS3_k127_2083831_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 348.0
CMS3_k127_2083831_4 CBS domain containing protein K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000009029 248.0
CMS3_k127_2083831_5 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K01055,K01259,K09023,K14727,K16434 GO:0006139,GO:0006206,GO:0006208,GO:0006212,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0017144,GO:0019740,GO:0019860,GO:0034641,GO:0042737,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 3.1.1.24,3.4.11.5,4.1.1.44 0.00000000000000000000000000001159 130.0
CMS3_k127_2102997_0 Carboxyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004372 590.0
CMS3_k127_2102997_1 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009541 583.0
CMS3_k127_2102997_10 PFAM Cyclic nucleotide-binding K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000001268 233.0
CMS3_k127_2102997_11 Domain of unknown function (DUF1932) - - - 0.000000000000000000000000000000000000000000000000000000000000001061 228.0
CMS3_k127_2102997_12 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000000002629 211.0
CMS3_k127_2102997_13 Phosphotransferase K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000009755 213.0
CMS3_k127_2102997_14 3-hydroxyacyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000009622 194.0
CMS3_k127_2102997_15 Pyridoxamine 5'-phosphate oxidase - - - 0.000000000000000000000000000000000000000000001374 173.0
CMS3_k127_2102997_16 Histidine phosphatase superfamily (branch 1) K15634 - 5.4.2.12 0.000000000000000000000000000000000000000006429 161.0
CMS3_k127_2102997_17 phosphoribosyl-AMP cyclohydrolase activity K01496,K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000003365 156.0
CMS3_k127_2102997_18 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.00000000000000000000000000000003001 134.0
CMS3_k127_2102997_19 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.00000000000000000000001285 108.0
CMS3_k127_2102997_2 thiamine pyrophosphate binding K12261 GO:0001561,GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005782,GO:0005829,GO:0006082,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0015031,GO:0015833,GO:0016042,GO:0016043,GO:0016054,GO:0016829,GO:0016830,GO:0019395,GO:0019752,GO:0019842,GO:0022607,GO:0030258,GO:0030976,GO:0031907,GO:0031974,GO:0032787,GO:0033036,GO:0033365,GO:0034440,GO:0034613,GO:0036094,GO:0042579,GO:0042802,GO:0042886,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043574,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046395,GO:0046907,GO:0048037,GO:0050662,GO:0051179,GO:0051234,GO:0051259,GO:0051641,GO:0051649,GO:0055114,GO:0065003,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072329,GO:0072594,GO:0072662,GO:0072663,GO:0097159,GO:1901363,GO:1901575,GO:1901681 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 505.0
CMS3_k127_2102997_20 IA, variant 3 K01560,K20866 - 3.1.3.10,3.8.1.2 0.00000000000000007339 91.0
CMS3_k127_2102997_21 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000000000000007958 86.0
CMS3_k127_2102997_22 Antibiotic biosynthesis monooxygenase K11530 - 5.3.1.32 0.00000000006828 67.0
CMS3_k127_2102997_23 - - - - 0.000000003998 60.0
CMS3_k127_2102997_24 - - - - 0.0000003835 57.0
CMS3_k127_2102997_25 Acetyltransferase (GNAT) domain K03789 GO:0003674,GO:0003824,GO:0004596,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031365,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.128 0.0000004765 59.0
CMS3_k127_2102997_26 Thioredoxin - - - 0.00005057 48.0
CMS3_k127_2102997_3 Amidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 484.0
CMS3_k127_2102997_4 Acyl-CoA dehydrogenase, middle domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 347.0
CMS3_k127_2102997_5 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003672 338.0
CMS3_k127_2102997_6 Acyl-CoA dehydrogenase, middle domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 338.0
CMS3_k127_2102997_7 lipid-transfer protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 321.0
CMS3_k127_2102997_8 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 314.0
CMS3_k127_2102997_9 PFAM L-carnitine dehydratase bile acid-inducible protein F K18702 - 2.8.3.19 0.00000000000000000000000000000000000000000000000000000000000000000000007382 256.0
CMS3_k127_2107547_0 Helix-hairpin-helix class 2 (Pol1 family) motifs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 318.0
CMS3_k127_2107547_1 Phosphotransferase K01007 - 2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000158 241.0
CMS3_k127_2107547_2 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000008656 202.0
CMS3_k127_2107547_3 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000001437 171.0
CMS3_k127_2107547_4 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.0000000000000000000000000000000000006624 157.0
CMS3_k127_2107547_5 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007,K21787 - 2.7.9.2 0.00000002362 63.0
CMS3_k127_2109977_0 Short-chain dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003185 275.0
CMS3_k127_2109977_1 Luciferase-like monooxygenase K00320 - 1.5.98.2 0.0000000000000000000000000000000000000000000000000003454 198.0
CMS3_k127_2109977_2 pyridoxamine 5'-phosphate oxidase - - - 0.000000000000000000017 98.0
CMS3_k127_2109977_3 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) K07069 - - 0.00000000000007826 74.0
CMS3_k127_2109977_4 Protein of unknown function (DUF664) - - - 0.0000000007955 69.0
CMS3_k127_2133822_0 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000007086 245.0
CMS3_k127_2133822_1 Tryptophan halogenase K21256 - - 0.000000000000281 73.0
CMS3_k127_2133822_2 PFAM Cupin 2, conserved barrel domain protein - - - 0.000000000001177 72.0
CMS3_k127_2133822_3 GDYXXLXY protein - - - 0.000000000002791 74.0
CMS3_k127_2133822_4 Pyridoxamine 5'-phosphate oxidase - - - 0.00000001932 61.0
CMS3_k127_2133822_5 - - - - 0.00000002615 63.0
CMS3_k127_2133822_6 Predicted membrane protein (DUF2157) - - - 0.0000003598 62.0
CMS3_k127_2137282_0 lactoylglutathione lyase activity K11210,K21253,K21264,K21265 GO:0003674,GO:0003824,GO:0004364,GO:0008150,GO:0016740,GO:0016765,GO:0042221,GO:0046677,GO:0050896 2.5.1.18 0.00000000000000000000000000000002401 130.0
CMS3_k127_2164371_0 Penicillin amidase K01434 - 3.5.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006782 395.0
CMS3_k127_2164371_1 Putative serine dehydratase domain - - - 0.00000000000000000000001146 106.0
CMS3_k127_2167956_0 Belongs to the amidase family K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004834 515.0
CMS3_k127_2167956_1 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000008201 214.0
CMS3_k127_2171007_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 350.0
CMS3_k127_2171007_1 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000004586 190.0
CMS3_k127_2171007_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000004465 166.0
CMS3_k127_2171007_3 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000192 103.0
CMS3_k127_2171007_4 Protein of unknown function (DUF503) K09764 - - 0.000000000041 67.0
CMS3_k127_2184339_0 Thioesterase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007227 273.0
CMS3_k127_2184339_1 Major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000007215 185.0
CMS3_k127_2184339_2 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000606 180.0
CMS3_k127_2184339_3 iron dependent repressor - - - 0.00000000000000000000000000000000000005749 150.0
CMS3_k127_2184339_4 substrate-binding protein K02035 - - 0.00000000000000000000000009391 123.0
CMS3_k127_2184339_5 Nitroreductase family - - - 0.00000000000000000000001079 107.0
CMS3_k127_2194131_0 PFAM ABC transporter transmembrane region K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005156 490.0
CMS3_k127_2194131_1 ABC transporter, transmembrane region K06147,K18890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009558 474.0
CMS3_k127_2194131_2 Phage portal protein, SPP1 Gp6-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 417.0
CMS3_k127_2194131_3 DNA packaging - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 353.0
CMS3_k127_2194131_4 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000003824 100.0
CMS3_k127_2194131_5 Hydrolase, HD family - - - 0.0000000000000000002065 96.0
CMS3_k127_2194131_6 - - - - 0.000000000000001618 82.0
CMS3_k127_2194131_7 - - - - 0.0008917 49.0
CMS3_k127_221659_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 6.355e-263 835.0
CMS3_k127_221659_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008598 365.0
CMS3_k127_221659_2 PFAM Acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000006573 171.0
CMS3_k127_221659_3 Chloramphenicol phosphotransferase-like protein - - - 0.0000000000000000000000000000000002383 138.0
CMS3_k127_221659_4 Thioesterase superfamily - - - 0.00000000000000000000000000000009997 135.0
CMS3_k127_221659_5 PhoD-like phosphatase - - - 0.00000007464 63.0
CMS3_k127_221659_6 - - - - 0.0000002292 57.0
CMS3_k127_222373_0 Domain of unknown function (DUF4389) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004829 243.0
CMS3_k127_222373_1 Arylsulfotransferase (ASST) - - - 0.00000000000000000000000000000000000000000000000000000000000000000008429 248.0
CMS3_k127_222373_2 Resolvase, N terminal domain - - - 0.000000001411 66.0
CMS3_k127_2231256_0 MgsA AAA+ ATPase C terminal K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002117 465.0
CMS3_k127_2231256_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003902 456.0
CMS3_k127_2231256_2 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000008486 231.0
CMS3_k127_2231256_3 xylulokinase activity K00854 - 2.7.1.17 0.00000000000000000000000000000000003239 148.0
CMS3_k127_2231256_4 domain protein associated with RNAses G and E K07586 - - 0.0000000000000003049 85.0
CMS3_k127_2231256_5 Sulfocyanin (SoxE) domain - - - 0.000000000001469 74.0
CMS3_k127_2240246_0 Enoyl-CoA hydratase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 343.0
CMS3_k127_2240246_1 Enoyl-CoA hydratase K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000071 207.0
CMS3_k127_2240246_2 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.0000000000000000000000000000000001982 145.0
CMS3_k127_2240246_3 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.00000000000002089 76.0
CMS3_k127_2249562_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 498.0
CMS3_k127_2249562_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005714 361.0
CMS3_k127_2249562_10 haloacid dehalogenase, type II K01560 - 3.8.1.2 0.00000000000000006487 91.0
CMS3_k127_2249562_11 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0040007,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.00000000006456 72.0
CMS3_k127_2249562_12 - - - - 0.000000006868 66.0
CMS3_k127_2249562_13 AntiSigma factor - - - 0.00002731 55.0
CMS3_k127_2249562_2 RibD C-terminal domain K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 319.0
CMS3_k127_2249562_3 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 303.0
CMS3_k127_2249562_4 dCTP deaminase activity K01494 GO:0003674,GO:0003824,GO:0004170,GO:0016462,GO:0016787,GO:0016810,GO:0016814,GO:0016817,GO:0016818,GO:0019239,GO:0033973,GO:0047429 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000001445 238.0
CMS3_k127_2249562_5 riboflavin synthase, alpha K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000003533 181.0
CMS3_k127_2249562_6 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000000000000007892 173.0
CMS3_k127_2249562_7 Protein of unknown function (DUF541) K09807 - - 0.000000000000000000000000000000000000003318 158.0
CMS3_k127_2249562_8 MobA-like NTP transferase domain K07281 - 2.7.7.74 0.000000000000000000000000000000000001254 149.0
CMS3_k127_2249562_9 Helix-turn-helix domain - - - 0.0000000000000000000000000006093 121.0
CMS3_k127_2253151_0 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 314.0
CMS3_k127_2253151_1 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007074 286.0
CMS3_k127_2253151_2 FAD dependent oxidoreductase K13796 - - 0.000000000000000000000000000000000000000000000000000000000000000000002469 244.0
CMS3_k127_2253151_3 carnitine dehydratase K07749 GO:0003674,GO:0003824,GO:0008410,GO:0016740,GO:0016782,GO:0047369 2.8.3.16 0.0000000000000000005584 97.0
CMS3_k127_2256171_0 AhpC/TSA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 454.0
CMS3_k127_2256171_1 KR domain K00065 - 1.1.1.127 0.0000000000000000000000000000000000000000000000000000000000000000000000000004259 264.0
CMS3_k127_2256171_2 - - - - 0.000000000000000000000000000005575 122.0
CMS3_k127_2256171_3 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000001565 121.0
CMS3_k127_2256171_4 - - - - 0.000000000000000000000000009142 110.0
CMS3_k127_2256171_5 F420H(2)-dependent quinone reductase - - - 0.00000000000004632 76.0
CMS3_k127_2258027_0 PFAM Glycosyl transferase family 2 K00694 - 2.4.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 468.0
CMS3_k127_2258027_1 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003994 399.0
CMS3_k127_2258027_2 acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005117 321.0
CMS3_k127_2258027_3 ATP dependent DNA ligase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004155 260.0
CMS3_k127_2258027_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008712 238.0
CMS3_k127_2258027_5 Acyl-CoA dehydrogenase, C-terminal domain K22027 - 1.14.13.235 0.000000000000000000000000000000000000000000000000000000000007126 230.0
CMS3_k127_2258027_6 - - - - 0.0000000000000000000001289 111.0
CMS3_k127_2263358_0 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003264 273.0
CMS3_k127_2263358_1 Alpha beta - - - 0.00000000000000000000000000000000000000000000000000000000000329 219.0
CMS3_k127_2263358_2 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000005019 205.0
CMS3_k127_2280928_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005177 430.0
CMS3_k127_2280928_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004321 405.0
CMS3_k127_2280928_10 protein related to plant photosystem II stability assembly factor - - - 0.00000000000000003256 93.0
CMS3_k127_2280928_11 - - - - 0.000000004289 63.0
CMS3_k127_2280928_2 PFAM 2-nitropropane dioxygenase NPD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003661 305.0
CMS3_k127_2280928_3 Acetyl-CoA hydrolase/transferase C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000006878 239.0
CMS3_k127_2280928_4 Major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000002854 246.0
CMS3_k127_2280928_5 form. Deacetylates the N-terminal lysine residue of Alba, the major archaeal chromatin protein and that, in turn, increases Alba's DNA binding affinity, thereby repressing transcription K12410 - - 0.0000000000000000000000000000000000000000000000000004314 195.0
CMS3_k127_2280928_6 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000001405 194.0
CMS3_k127_2280928_7 hydrolases or acyltransferases (alpha beta hydrolase superfamily) K01175,K06049 - - 0.0000000000000000000000000000000000000000319 164.0
CMS3_k127_2280928_8 Pyridoxamine 5'-phosphate oxidase - - - 0.0000000000000000000000000000000000000217 156.0
CMS3_k127_2280928_9 acyl-CoA transferases carnitine dehydratase K18702 - 2.8.3.19 0.00000000000000000000000000000000000004309 165.0
CMS3_k127_229569_0 Nad-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004946 255.0
CMS3_k127_2300367_0 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008641 271.0
CMS3_k127_2300367_1 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000001974 231.0
CMS3_k127_2300367_2 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000004309 203.0
CMS3_k127_2300367_3 NUDIX domain - - - 0.0000000000000000000000000000000000000009615 153.0
CMS3_k127_2300367_4 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000001952 130.0
CMS3_k127_2300367_5 - - - - 0.00000003709 61.0
CMS3_k127_230067_0 Replicative DNA helicase K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000001469 256.0
CMS3_k127_230067_1 TIGRFAM primosome, DnaD subunit - - - 0.0000000000000000000000000000127 127.0
CMS3_k127_23284_0 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 342.0
CMS3_k127_23284_1 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 294.0
CMS3_k127_23284_2 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000824 245.0
CMS3_k127_23284_3 helix_turn_helix, Lux Regulon K03556 - - 0.000000000003528 67.0
CMS3_k127_23284_4 SnoaL-like polyketide cyclase - - - 0.00001386 53.0
CMS3_k127_2334224_0 acetyl-coa acetyltransferase K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003954 461.0
CMS3_k127_2334224_1 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006808 304.0
CMS3_k127_2334224_10 Thioesterase superfamily K02614 - - 0.000002233 57.0
CMS3_k127_2334224_11 Lamin Tail Domain - - - 0.00006955 55.0
CMS3_k127_2334224_2 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001996 292.0
CMS3_k127_2334224_3 Inositol monophosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000001711 231.0
CMS3_k127_2334224_4 phosphatidylinositol kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000004564 218.0
CMS3_k127_2334224_5 HNH endonuclease K07454 - - 0.0000000000000000000000000000000000000000000000000000006237 201.0
CMS3_k127_2334224_6 - - - - 0.0000000000000000000000000000000000000000003757 166.0
CMS3_k127_2334224_7 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.00000000000000000000000000000000000002384 149.0
CMS3_k127_2334224_8 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000003646 86.0
CMS3_k127_2334224_9 Halocarboxylic acid dehydrogenase DehI - - - 0.0000006366 60.0
CMS3_k127_2337612_0 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000203 272.0
CMS3_k127_2337612_1 carnitine dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000003388 245.0
CMS3_k127_2337612_2 TIGRFAM PAS domain S-box - - - 0.000000000000000000000000000000000000001972 154.0
CMS3_k127_2337612_3 translation initiation factor activity K06996 - - 0.0004045 50.0
CMS3_k127_2346708_0 Zn-dependent alcohol dehydrogenases K00121 - 1.1.1.1,1.1.1.284 0.0000000000000000000000000000000000000000000000000000000000000000000000000005463 266.0
CMS3_k127_2346708_1 Carbonic anhydrase K01673 - 4.2.1.1 0.00000000000000000000000000000001218 135.0
CMS3_k127_2420602_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003871,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0032259,GO:0042084,GO:0042085,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050667,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.14 5.048e-268 850.0
CMS3_k127_2420602_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 2.981e-198 640.0
CMS3_k127_2420602_2 cyclic nucleotide binding K01420,K10716,K10914,K16922 - - 0.0000000000000000000000000000000000000000000002811 183.0
CMS3_k127_2420602_3 peptidase U32 - - - 0.00000000000000000006485 93.0
CMS3_k127_2420602_4 transcriptional K22295 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141 - 0.0000000000000000001176 98.0
CMS3_k127_2420602_5 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0000000000000001707 84.0
CMS3_k127_2420602_6 Protein of unknown function (DUF2892) - - - 0.00000000004807 68.0
CMS3_k127_2421557_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 443.0
CMS3_k127_2421557_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:1901564 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009837 325.0
CMS3_k127_2421557_2 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000003039 238.0
CMS3_k127_2421557_3 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000000000004689 203.0
CMS3_k127_2421557_4 Catalyzes two subsequent steps in gluconeogenesis the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3-phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P) K01622 - 3.1.3.11,4.1.2.13 0.000000000000000000000000000000000000000000000000000005391 203.0
CMS3_k127_2421557_5 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000001126 177.0
CMS3_k127_2421557_6 - - - - 0.00000000000000000006751 97.0
CMS3_k127_2421557_7 protein serine/threonine phosphatase activity - - - 0.00001028 59.0
CMS3_k127_2498084_0 Prolyl oligopeptidase family K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000007891 248.0
CMS3_k127_2498084_1 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000001203 155.0
CMS3_k127_2498084_2 Trehalose utilisation K09992 - - 0.000000000000000000000000000000000000562 150.0
CMS3_k127_2505061_0 tail specific protease K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000001203 249.0
CMS3_k127_2505061_1 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000001223 198.0
CMS3_k127_2505061_2 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0070930,GO:0071704,GO:1901564 - 0.000000000000000000000000000000000000001524 152.0
CMS3_k127_2505061_3 Belongs to the UPF0145 family - - - 0.000000000000000000000000003104 114.0
CMS3_k127_2505061_4 IPT/TIG domain - - - 0.000005319 59.0
CMS3_k127_2505061_5 HemY domain protein - - - 0.00001424 59.0
CMS3_k127_2505061_6 C-terminal domain of CHU protein family - - - 0.0004407 53.0
CMS3_k127_2546016_0 Peptidase S9 prolyl oligopeptidase active site - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003746 464.0
CMS3_k127_2546016_1 alcohol dehydrogenase (NAD) activity K00001,K00121,K02267,K13980,K18857 GO:0000302,GO:0001101,GO:0001666,GO:0003674,GO:0003824,GO:0004022,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0006970,GO:0006979,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009410,GO:0009413,GO:0009414,GO:0009415,GO:0009628,GO:0009636,GO:0009651,GO:0009719,GO:0009725,GO:0009737,GO:0009743,GO:0009744,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0014070,GO:0014074,GO:0016020,GO:0016491,GO:0016614,GO:0016616,GO:0031000,GO:0032355,GO:0033993,GO:0034285,GO:0036270,GO:0036293,GO:0042221,GO:0042493,GO:0042542,GO:0042802,GO:0042803,GO:0043279,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046686,GO:0046983,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0055114,GO:0065007,GO:0070482,GO:0071944,GO:0080134,GO:0080135,GO:0097305,GO:1900037,GO:1900039,GO:1901698,GO:1901700 1.1.1.1,1.1.1.284 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 421.0
CMS3_k127_2546016_10 - K01992,K19341 - - 0.0000000000000000000002998 110.0
CMS3_k127_2546016_11 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000002174 72.0
CMS3_k127_2546016_12 helix_turn_helix, Lux Regulon K03556 - - 0.000000002671 72.0
CMS3_k127_2546016_2 NB-ARC domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 372.0
CMS3_k127_2546016_3 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351 311.0
CMS3_k127_2546016_4 PFAM short-chain dehydrogenase reductase SDR K00023,K00059 - 1.1.1.100,1.1.1.36 0.000000000000000000000000000000000000000000000000000000000000000005049 238.0
CMS3_k127_2546016_5 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000001596 207.0
CMS3_k127_2546016_6 KR domain - - - 0.00000000000000000000000000000000000000000000000000005101 199.0
CMS3_k127_2546016_7 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000835 192.0
CMS3_k127_2546016_8 F420H(2)-dependent quinone reductase - - - 0.00000000000000000000000000000000001238 145.0
CMS3_k127_2546016_9 PFAM Uncharacterised protein family UPF0157 - - - 0.000000000000000000000000000001539 130.0
CMS3_k127_2613_0 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003831 410.0
CMS3_k127_2613_1 oxidoreductase K17218 - 1.8.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000895 316.0
CMS3_k127_2613_2 tRNA wobble cytosine modification - - - 0.00000000000000000000000000000001826 136.0
CMS3_k127_2613_3 Zincin-like metallopeptidase - - - 0.0000000000000000000000000003351 118.0
CMS3_k127_2613_4 PFAM DsrE family protein K06039 - - 0.0000000000000000000000007452 111.0
CMS3_k127_2613_5 PFAM regulatory protein, ArsR - - - 0.000000000000000000301 96.0
CMS3_k127_2613_7 SnoaL-like domain - - - 0.000000000000005608 80.0
CMS3_k127_261808_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 382.0
CMS3_k127_261808_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 336.0
CMS3_k127_261808_2 Phosphoesterase K07095 - - 0.00000000000000000001305 96.0
CMS3_k127_2684934_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 2.256e-205 654.0
CMS3_k127_2684934_1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 519.0
CMS3_k127_2684934_10 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004059 257.0
CMS3_k127_2684934_11 Polyprenyl synthetase K00805,K02523 - 2.5.1.30,2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000002537 241.0
CMS3_k127_2684934_12 Radical SAM domain protein K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000005549 235.0
CMS3_k127_2684934_13 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000189 172.0
CMS3_k127_2684934_14 Protein of unknown function (DUF2889) K07053 - 3.1.3.97 0.0000000000000000000000000000000000000001045 160.0
CMS3_k127_2684934_15 Pyridoxamine 5'-phosphate oxidase - - - 0.0000000000000000000000000000002755 130.0
CMS3_k127_2684934_16 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K00332 - 1.6.5.3 0.0000000000000000000000000000005257 129.0
CMS3_k127_2684934_17 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.00000000000000000000000000004954 123.0
CMS3_k127_2684934_18 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.0000000000000000000000000004049 126.0
CMS3_k127_2684934_19 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K01489,K07042 - 3.5.4.5 0.000000000000000000000000004236 116.0
CMS3_k127_2684934_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 458.0
CMS3_k127_2684934_20 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 - 1.6.5.3 0.00000000000000000002157 98.0
CMS3_k127_2684934_21 Belongs to the complex I subunit 6 family K00339,K05578 - 1.6.5.3 0.0000000000000926 79.0
CMS3_k127_2684934_22 Cyclin-dependent kinase inhibitor 3 (CDKN3) - - - 0.0001907 45.0
CMS3_k127_2684934_3 IMP dehydrogenase / GMP reductase domain K00088 - 1.1.1.205 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 406.0
CMS3_k127_2684934_4 NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 380.0
CMS3_k127_2684934_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004865 335.0
CMS3_k127_2684934_6 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 333.0
CMS3_k127_2684934_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006605 306.0
CMS3_k127_2684934_8 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008434 298.0
CMS3_k127_2684934_9 Belongs to the thiolase family K02615 - 2.3.1.174,2.3.1.223 0.00000000000000000000000000000000000000000000000000000000000000000000000000001341 276.0
CMS3_k127_2694400_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311 391.0
CMS3_k127_2694400_1 Serine acetyltransferase, N-terminal K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000001666 244.0
CMS3_k127_2694400_2 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000006912 164.0
CMS3_k127_2694400_3 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0000166,GO:0000287,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016020,GO:0016114,GO:0016740,GO:0016772,GO:0016779,GO:0019103,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0032787,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044464,GO:0046490,GO:0046872,GO:0046914,GO:0050518,GO:0051483,GO:0051484,GO:0070567,GO:0071704,GO:0071944,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901576 2.7.7.60 0.000000000000000000000001159 106.0
CMS3_k127_2717029_0 amino acid activation for nonribosomal peptide biosynthetic process K03641,K20276 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007998 439.0
CMS3_k127_2717029_1 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000004509 196.0
CMS3_k127_2717029_2 Metallo-peptidase family M12B Reprolysin-like - - - 0.0002464 54.0
CMS3_k127_2735500_0 Fe-S oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 524.0
CMS3_k127_2735500_1 AMP-binding enzyme C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 434.0
CMS3_k127_2735500_2 ATPase associated with various cellular activities AAA_5 K04748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 356.0
CMS3_k127_2735500_3 von Willebrand factor (vWF) type A domain K02448 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009205 335.0
CMS3_k127_2735500_4 PFAM Electron transfer flavoprotein domain K03522 - - 0.0000000000000000000000000000000000000000000000000000000007745 222.0
CMS3_k127_2735500_5 electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000000001082 202.0
CMS3_k127_2735500_6 Bifunctional coenzyme A synthase K02318 GO:0000003,GO:0001667,GO:0002009,GO:0002064,GO:0002065,GO:0002066,GO:0002165,GO:0003006,GO:0003674,GO:0003824,GO:0004140,GO:0004595,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005759,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006928,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007300,GO:0007303,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009987,GO:0010631,GO:0015936,GO:0015937,GO:0016020,GO:0016301,GO:0016310,GO:0016477,GO:0016482,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019867,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0030707,GO:0030855,GO:0031090,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0040011,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0046390,GO:0046483,GO:0046907,GO:0048468,GO:0048477,GO:0048513,GO:0048563,GO:0048569,GO:0048609,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051641,GO:0051649,GO:0051674,GO:0051704,GO:0055086,GO:0055088,GO:0055090,GO:0060429,GO:0060562,GO:0065007,GO:0065008,GO:0070013,GO:0070328,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090130,GO:0090132,GO:0090407,GO:0098588,GO:0098805,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24,2.7.7.3 0.000000000000000000000000000000000000000000000003493 182.0
CMS3_k127_2735500_7 Ecdysteroid kinase - - - 0.000000000000000000000000000000000000006282 160.0
CMS3_k127_2735500_8 PFAM beta-lactamase domain protein - - - 0.000000000000000000000000000005673 131.0
CMS3_k127_2735500_9 Enoyl-CoA hydratase K01692 - 4.2.1.17 0.0000000000000000000000001104 109.0
CMS3_k127_28025_0 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 460.0
CMS3_k127_28025_1 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000001294 217.0
CMS3_k127_28025_2 Pyridoxamine 5'-phosphate oxidase - - - 0.00000000000000000000000002385 115.0
CMS3_k127_2807745_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058,K16843 - 1.1.1.310,1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006734 279.0
CMS3_k127_2807745_1 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.000000000000000000000000000000000000000000000000000000000000000000000000003994 261.0
CMS3_k127_2807745_2 Belongs to the LDH2 MDH2 oxidoreductase family K13574 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005988 264.0
CMS3_k127_2807745_3 Site-specific DNA-methyltransferase (Adenine-specific) K06223 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000008619 258.0
CMS3_k127_288851_0 PFAM Helicase conserved C-terminal domain K06877 - - 8.72e-258 818.0
CMS3_k127_288851_1 Acyl-CoA dehydrogenase, middle domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008828 455.0
CMS3_k127_288851_2 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004721 338.0
CMS3_k127_288851_3 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000005017 241.0
CMS3_k127_288851_4 Flavin reductase like domain - - - 0.000000000000000000000000000000004419 141.0
CMS3_k127_288851_5 Beta-lactamase K17836 - 3.5.2.6 0.000000000000000000000001088 117.0
CMS3_k127_288851_6 RDD domain containing protein - GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000004947 76.0
CMS3_k127_2890208_0 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009138 434.0
CMS3_k127_2890208_1 Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate K00598 - 2.1.1.144 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002516 282.0
CMS3_k127_2890208_2 PFAM peptidase S11, D-alanyl-D-alanine carboxypeptidase K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000001703 201.0
CMS3_k127_2890208_3 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 0.0000000000000092 77.0
CMS3_k127_2890208_4 Domain of unknown function (DUF4114) - - - 0.0005175 51.0
CMS3_k127_2892261_0 acetyl-coa acetyltransferase K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 509.0
CMS3_k127_2892261_1 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 309.0
CMS3_k127_2892261_2 ROK family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000001468 200.0
CMS3_k127_2892261_3 DUF35 OB-fold domain, acyl-CoA-associated - - - 0.00000000000000000000000000000000000000000000000000271 191.0
CMS3_k127_2904471_0 Transglutaminase/protease-like homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005936 449.0
CMS3_k127_2904471_1 Amidases related to nicotinamidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 314.0
CMS3_k127_2904471_10 RibD C-terminal domain - - - 0.0000000001276 64.0
CMS3_k127_2904471_11 ferredoxin--nadp reductase K00528 - 1.18.1.2,1.19.1.1 0.00000000118 69.0
CMS3_k127_2904471_12 Photosynthesis system II assembly factor YCF48 - - - 0.000000003701 68.0
CMS3_k127_2904471_13 - - - - 0.00000004982 63.0
CMS3_k127_2904471_14 PFAM Spore germination protein-like Gmad2, bacteria - - - 0.0000009548 61.0
CMS3_k127_2904471_2 Activator of Hsp90 ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002137 255.0
CMS3_k127_2904471_3 Bacterial transglutaminase-like N-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000003166 242.0
CMS3_k127_2904471_4 PFAM Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000001249 197.0
CMS3_k127_2904471_5 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000000000000000000000000001318 205.0
CMS3_k127_2904471_6 Cupin - - - 0.0000000000000000000000000000000000000000001405 171.0
CMS3_k127_2904471_7 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000001675 155.0
CMS3_k127_2904471_8 - - - - 0.00000000000000008439 85.0
CMS3_k127_2904471_9 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000001163 77.0
CMS3_k127_2906640_0 helicase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 295.0
CMS3_k127_2906640_1 PFAM nuclease (SNase K01174 - 3.1.31.1 0.000000000000000000000000000001103 133.0
CMS3_k127_2915080_0 Acyl-CoA dehydrogenase, middle domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 320.0
CMS3_k127_2915080_1 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000558 271.0
CMS3_k127_2915080_2 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000002053 207.0
CMS3_k127_2915080_3 Transmembrane secretion effector - - - 0.00000000000000000000000000000000001059 153.0
CMS3_k127_2915080_4 PFAM phospholipase Carboxylesterase K06999 - - 0.0000000000000000000000000000000004099 140.0
CMS3_k127_2915080_5 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000003822 81.0
CMS3_k127_2916480_0 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006145 296.0
CMS3_k127_2916480_1 ABC transporter, permease protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 288.0
CMS3_k127_2916480_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000001414 258.0
CMS3_k127_2916480_3 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749,K18313 - 2.8.3.16,2.8.3.20 0.00001795 48.0
CMS3_k127_2916480_4 CoA-transferase family III - - - 0.00006222 50.0
CMS3_k127_296091_0 Polysulphide reductase K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 441.0
CMS3_k127_296091_1 Heavy metal translocating P-type atpase K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 373.0
CMS3_k127_296091_2 COG0437 Fe-S-cluster-containing hydrogenase components 1 K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006051 347.0
CMS3_k127_296091_3 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004845 245.0
CMS3_k127_296091_4 Histidine kinase K07777,K19661,K21405 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000007292 218.0
CMS3_k127_2972294_0 Fatty acid desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001582 252.0
CMS3_k127_2972294_1 Truncated hemoglobins K06886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001834 241.0
CMS3_k127_2972294_10 - - - - 0.000000003505 66.0
CMS3_k127_2972294_12 - - - - 0.00000002691 66.0
CMS3_k127_2972294_13 Endoribonuclease L-PSP - - - 0.00000009838 55.0
CMS3_k127_2972294_14 serine threonine protein kinase - - - 0.0000001096 60.0
CMS3_k127_2972294_15 Peptidase S24-like - - - 0.00000133 54.0
CMS3_k127_2972294_2 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000156 222.0
CMS3_k127_2972294_3 Bacterial transcriptional activator domain - - - 0.00000000000000000000000000000000000000000000000000000000000001998 223.0
CMS3_k127_2972294_4 methyltransferase - - - 0.00000000000000000000000000000000000000000000001172 181.0
CMS3_k127_2972294_5 Histidine kinase K07777,K19661,K21405 - 2.7.13.3 0.000000000000000000000000000000000000001731 167.0
CMS3_k127_2972294_6 MFS_1 like family - - - 0.00000000000000000000000000000000002582 152.0
CMS3_k127_2972294_7 - - - - 0.000000000000000000000002783 117.0
CMS3_k127_2972294_8 Transglycosylase associated protein - - - 0.0000000003318 69.0
CMS3_k127_2972294_9 Acetyltransferase (GNAT) family K22477 - 2.3.1.1 0.000000001068 65.0
CMS3_k127_2980989_0 VWA domain containing CoxE-like protein K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001937 300.0
CMS3_k127_2980989_1 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000004999 128.0
CMS3_k127_2980989_2 YacP-like NYN domain - - - 0.00000000000000000000000005987 119.0
CMS3_k127_2981285_0 Protein of unknown function (DUF2961) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 541.0
CMS3_k127_2981285_1 PFAM Adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000000000000000000000000000002684 156.0
CMS3_k127_2981285_2 YCII-related domain - - - 0.00000000000000000007318 94.0
CMS3_k127_2981285_3 Protein of unknown function (DUF983) - - - 0.00007461 51.0
CMS3_k127_299025_0 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 326.0
CMS3_k127_299025_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000002605 231.0
CMS3_k127_299025_10 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.000000000000000000000000001098 126.0
CMS3_k127_299025_11 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000006537 100.0
CMS3_k127_299025_12 Copper binding proteins, plastocyanin/azurin family - - - 0.000000000000002023 83.0
CMS3_k127_299025_13 Alpha beta hydrolase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000001918 83.0
CMS3_k127_299025_14 glycerophosphodiester phosphodiesterase activity K01126 - 3.1.4.46 0.000004756 56.0
CMS3_k127_299025_2 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000005306 223.0
CMS3_k127_299025_3 AP endonuclease family 2 K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000002613 215.0
CMS3_k127_299025_4 water channel activity K02440,K06188,K09874 - - 0.000000000000000000000000000000000000000000000000000000002161 207.0
CMS3_k127_299025_5 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000337 212.0
CMS3_k127_299025_6 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000006939 190.0
CMS3_k127_299025_7 methyltransferase activity - - - 0.0000000000000000000000000000000000000000002466 181.0
CMS3_k127_299025_8 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.000000000000000000000000000000000006199 150.0
CMS3_k127_299025_9 4Fe-4S binding domain - - - 0.00000000000000000000000000002334 124.0
CMS3_k127_3001396_0 dehydratase - - - 0.00000000000000000000000000000000003376 151.0
CMS3_k127_3003138_0 PFAM AMP-dependent synthetase and ligase K01897,K22319 - 6.1.3.1,6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006805 576.0
CMS3_k127_3003138_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004186 443.0
CMS3_k127_3003138_10 - - - - 0.0000000000000000000000000000000000000001408 162.0
CMS3_k127_3003138_11 HNH nucleases - - - 0.0000000000000000000000000002146 123.0
CMS3_k127_3003138_12 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000004904 123.0
CMS3_k127_3003138_13 PFAM RNP-1 like RNA-binding protein - - - 0.000000000000000000000000008395 112.0
CMS3_k127_3003138_14 translation initiation factor activity K06996 - - 0.0000000000000000000000003745 110.0
CMS3_k127_3003138_15 - - - - 0.00000000000009303 82.0
CMS3_k127_3003138_16 Domain of unknown function (DUF1858) - - - 0.0000000000002515 82.0
CMS3_k127_3003138_17 Penicillin amidase K01434 - 3.5.1.11 0.0000000000003322 77.0
CMS3_k127_3003138_18 Cysteine dioxygenase type I - - - 0.000000001315 71.0
CMS3_k127_3003138_19 HicB family - - - 0.000001864 56.0
CMS3_k127_3003138_2 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity K01955,K01956 GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0040007,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009746 388.0
CMS3_k127_3003138_3 Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons K01563 - 3.8.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 376.0
CMS3_k127_3003138_4 amino acid binding K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 368.0
CMS3_k127_3003138_5 Catalyzes the desulfonation of aliphatic sulfonates K04091 - 1.14.14.5 0.000000000000000000000000000000000000000000000000000000000000000000000000004786 268.0
CMS3_k127_3003138_6 PAC2 family - - - 0.000000000000000000000000000000000000000000000000000000000000002873 228.0
CMS3_k127_3003138_7 kinase activity K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000005954 229.0
CMS3_k127_3003138_8 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000353 204.0
CMS3_k127_3003138_9 Aminoglycoside phosphotransferase - - - 0.0000000000000000000000000000000000000000002205 174.0
CMS3_k127_3017856_0 Na+/Pi-cotransporter K03324,K14683 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009485 352.0
CMS3_k127_3017856_1 PhoU domain - - - 0.0000000000000000000000000000000000000000000000007772 182.0
CMS3_k127_3017856_2 PFAM type II secretion system K12511 - - 0.0000000000000000000000000000000000007464 151.0
CMS3_k127_3017856_3 Bacterial transcriptional activator domain - - - 0.00000000000000000000000000000004137 138.0
CMS3_k127_3017856_4 Type II secretion system K12510 - - 0.00000000000000000000000000000008296 138.0
CMS3_k127_3017856_5 Type II/IV secretion system protein K02283 - - 0.000000000000002445 77.0
CMS3_k127_3017856_6 von Willebrand factor, type A K07114 - - 0.00000000000002304 87.0
CMS3_k127_3017856_7 aspartic-type endopeptidase activity K02654 - 3.4.23.43 0.0000000002982 69.0
CMS3_k127_3017856_8 Lysin motif - - - 0.00003567 56.0
CMS3_k127_303747_0 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003586 421.0
CMS3_k127_303747_1 short-chain dehydrogenase reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 318.0
CMS3_k127_303747_10 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000002755 76.0
CMS3_k127_303747_2 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000002365 263.0
CMS3_k127_303747_3 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000126 241.0
CMS3_k127_303747_4 Methyltransferase small domain - - - 0.00000000000000000000000000000000000000000000000000000000000004129 224.0
CMS3_k127_303747_5 4-phosphoerythronate dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000006852 201.0
CMS3_k127_303747_6 methyltransferase - - - 0.00000000000000000000000000000000001066 146.0
CMS3_k127_303747_7 PFAM NIPSNAP family containing protein - - - 0.0000000000000000000000000000001328 130.0
CMS3_k127_303747_8 Major facilitator superfamily - - - 0.000000000000000000000000005586 124.0
CMS3_k127_303747_9 decarboxylase K01607 - 4.1.1.44 0.0000000000000000000003721 102.0
CMS3_k127_3039487_0 PFAM Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000003607 226.0
CMS3_k127_3053393_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 554.0
CMS3_k127_3053393_1 AICARFT/IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007895 493.0
CMS3_k127_3053393_2 Domain of unknown function (DUF4405) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004365 353.0
CMS3_k127_3053393_3 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001544 292.0
CMS3_k127_3053393_4 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007303 262.0
CMS3_k127_3053393_5 CoA-binding protein K06929 - - 0.0000000000000000000000000000000002728 141.0
CMS3_k127_3053393_6 Cytochrome b(C-terminal)/b6/petD - - - 0.0000000000000000000000000000000006351 135.0
CMS3_k127_3053393_7 nUDIX hydrolase - - - 0.00000000000000000000000000000002133 141.0
CMS3_k127_3053393_8 Trm112p-like protein - - - 0.000000000000000000008115 94.0
CMS3_k127_3068545_0 response regulator - - - 0.0003489 51.0
CMS3_k127_3068545_1 Type ii secretion system protein e K02283 - - 0.0007585 46.0
CMS3_k127_3087317_0 CoA-transferase family III K18702 - 2.8.3.19 0.0000000000000000000006383 108.0
CMS3_k127_3087317_1 CoA-transferase family III - - - 0.000000000000000000001032 104.0
CMS3_k127_3089902_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1065.0
CMS3_k127_3089902_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 345.0
CMS3_k127_3089902_2 Aminoglycoside phosphotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 327.0
CMS3_k127_3089902_3 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001149 293.0
CMS3_k127_3089902_4 Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000007865 250.0
CMS3_k127_3089902_5 endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000003389 159.0
CMS3_k127_3089902_6 Probable zinc-ribbon domain - - - 0.00000000000000000000000000000002112 135.0
CMS3_k127_3089902_7 Domain of unknown function (DUF4115) - - - 0.0000000000000001027 87.0
CMS3_k127_3089902_8 Binds directly to 16S ribosomal RNA K02968 - - 0.000000001432 63.0
CMS3_k127_3099866_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 3.74e-207 666.0
CMS3_k127_3099866_1 Elongation factor SelB, winged helix K03833 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003091 519.0
CMS3_k127_3099866_2 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000309 370.0
CMS3_k127_3099866_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008472 336.0
CMS3_k127_3099866_4 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000005686 216.0
CMS3_k127_3099866_5 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000001026 149.0
CMS3_k127_3135360_0 cell redox homeostasis K02199 - - 0.00000000000000000000000001589 121.0
CMS3_k127_3135360_1 Cytochrome c biogenesis protein - - - 0.000000000000008188 83.0
CMS3_k127_3140263_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1125.0
CMS3_k127_3140263_1 Belongs to the glutamate synthase family K22083 - 2.1.1.21 1.298e-210 667.0
CMS3_k127_3140263_10 creatinase K01262,K01271 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008357 314.0
CMS3_k127_3140263_11 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005706 304.0
CMS3_k127_3140263_12 Belongs to the peptidase M50B family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005119 282.0
CMS3_k127_3140263_13 Proteasome subunit K07395 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001135 254.0
CMS3_k127_3140263_14 of ABC transporters with duplicated ATPase K06158 - - 0.000000000000000000000000000000000000000000000000000000000000000000002879 244.0
CMS3_k127_3140263_15 TIGRFAM Tyrosine recombinase XerD K03733,K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000002314 240.0
CMS3_k127_3140263_16 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000006992 213.0
CMS3_k127_3140263_17 PFAM Bacterial domain of - - - 0.0000000000000000000000000000000000000000000000000000000001339 215.0
CMS3_k127_3140263_18 Formyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000002529 212.0
CMS3_k127_3140263_19 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000419 203.0
CMS3_k127_3140263_2 UvrD/REP helicase N-terminal domain K03657 - 3.6.4.12 5.208e-209 674.0
CMS3_k127_3140263_20 PFAM GDSL-like Lipase Acylhydrolase - - - 0.0000000000000000000000000000000000000000000000000001047 198.0
CMS3_k127_3140263_21 TIGRFAM MazG family protein K02428,K02499 - 3.6.1.66 0.00000000000000000000000000000000000000000000000938 184.0
CMS3_k127_3140263_22 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0040007,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.000000000000000000000000000000000000000000002351 173.0
CMS3_k127_3140263_23 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000005024 170.0
CMS3_k127_3140263_24 PFAM transglutaminase domain protein - - - 0.000000000000000000000000000000000000000004997 164.0
CMS3_k127_3140263_25 Double zinc ribbon - - - 0.0000000000000000000000000000000000002622 148.0
CMS3_k127_3140263_26 Protein of unknown function (DUF1461) - - - 0.00000000000000000000000000000000002379 145.0
CMS3_k127_3140263_27 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000003242 144.0
CMS3_k127_3140263_28 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K01055,K01259,K09023,K14727,K16434 GO:0006139,GO:0006206,GO:0006208,GO:0006212,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0017144,GO:0019740,GO:0019860,GO:0034641,GO:0042737,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 3.1.1.24,3.4.11.5,4.1.1.44 0.0000000000000000000000000000000002059 139.0
CMS3_k127_3140263_29 Thioredoxin - - - 0.0000000000000000000839 98.0
CMS3_k127_3140263_3 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 571.0
CMS3_k127_3140263_30 BioD-like N-terminal domain of phosphotransacetylase K06873 - - 0.000000001389 68.0
CMS3_k127_3140263_33 exodeoxyribonuclease VII activity K03602 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008855,GO:0009056,GO:0009057,GO:0009318,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575,GO:1902494 3.1.11.6 0.000001025 55.0
CMS3_k127_3140263_4 Circularly permuted ATP-grasp type 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006383 520.0
CMS3_k127_3140263_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006245 454.0
CMS3_k127_3140263_6 MMPL family K06994,K20470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008183 432.0
CMS3_k127_3140263_7 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008491 385.0
CMS3_k127_3140263_8 Alpha beta hydrolase K01253,K08253 - 2.7.10.2,3.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003359 366.0
CMS3_k127_3140263_9 Phosphohydrolase-associated domain K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 355.0
CMS3_k127_3163142_0 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 620.0
CMS3_k127_3163142_1 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005045 586.0
CMS3_k127_3163142_10 PFAM Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000002076 111.0
CMS3_k127_3163142_11 Oxidoreductase molybdopterin binding domain - - - 0.0000000000000000000002902 97.0
CMS3_k127_3163142_12 DinB superfamily - - - 0.00000000000000000001805 98.0
CMS3_k127_3163142_13 transcriptional regulator, XRE family - - - 0.0000008862 55.0
CMS3_k127_3163142_2 Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 450.0
CMS3_k127_3163142_3 (ABC) transporter, permease K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005389 272.0
CMS3_k127_3163142_4 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000001096 265.0
CMS3_k127_3163142_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009691 248.0
CMS3_k127_3163142_6 Ion channel K10716 - - 0.000000000000000000000000000000000000000000000000000000000000007195 228.0
CMS3_k127_3163142_7 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.00000000000000000000000000000000000000000000000002732 184.0
CMS3_k127_3163142_8 diacylglycerol kinase, catalytic region - - - 0.0000000000000000000000000000000000000000001256 171.0
CMS3_k127_3163142_9 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000002773 152.0
CMS3_k127_3166026_0 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 391.0
CMS3_k127_3166026_1 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 391.0
CMS3_k127_3166026_2 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002771 252.0
CMS3_k127_3166026_3 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002771 252.0
CMS3_k127_3166026_4 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001016 235.0
CMS3_k127_3166026_5 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001016 235.0
CMS3_k127_3166026_6 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000004232 206.0
CMS3_k127_3166026_7 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000004232 206.0
CMS3_k127_3176356_0 Elongation factor G, domain IV K02355 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 584.0
CMS3_k127_3176356_1 L-carnitine dehydratase bile acid-inducible protein F - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001833 541.0
CMS3_k127_3176356_2 PFAM Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000003607 228.0
CMS3_k127_3176356_3 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000791 216.0
CMS3_k127_3184967_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 592.0
CMS3_k127_3184967_1 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 439.0
CMS3_k127_3184967_2 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 378.0
CMS3_k127_3184967_3 Peptidase family M1 domain K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006921 366.0
CMS3_k127_3184967_4 cell redox homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000000000007017 256.0
CMS3_k127_3184967_5 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000005224 221.0
CMS3_k127_3184967_6 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000002818 189.0
CMS3_k127_3184967_7 Uncharacterized ACR, COG1430 K09005 - - 0.000000000002521 75.0
CMS3_k127_3293800_0 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000001449 226.0
CMS3_k127_3293800_2 Acetyltransferase (GNAT) domain - - - 0.00000000000000000005382 103.0
CMS3_k127_3293800_3 decarboxylase K01607 - 4.1.1.44 0.0000000000000000001625 94.0
CMS3_k127_3293800_4 VWA domain containing CoxE-like protein K07114 - - 0.00000000001378 74.0
CMS3_k127_3293800_5 - - - - 0.00001021 56.0
CMS3_k127_3308566_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 8.672e-209 655.0
CMS3_k127_3308566_1 PFAM single-stranded nucleic acid binding R3H domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 568.0
CMS3_k127_3308566_10 Putative NAD(P)-binding K03499 - - 0.000000000000000000000000000000000000000000000000582 192.0
CMS3_k127_3308566_11 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000004127 168.0
CMS3_k127_3308566_12 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000009155 151.0
CMS3_k127_3308566_13 PFAM TrkA-N domain protein K03499 - - 0.000000000000000000000000000000000003986 141.0
CMS3_k127_3308566_14 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000001238 136.0
CMS3_k127_3308566_15 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000003667 127.0
CMS3_k127_3308566_16 retrograde transport, endosome to Golgi K07095 - - 0.000000000000000000000000001628 125.0
CMS3_k127_3308566_17 Domain of unknown function (DUF4349) - - - 0.00000000000000000000003709 111.0
CMS3_k127_3308566_18 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.00000000000000000236 89.0
CMS3_k127_3308566_19 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000004007 83.0
CMS3_k127_3308566_2 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016020,GO:0016829,GO:0016840,GO:0016843,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0040007,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046184,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 4.3.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009114 412.0
CMS3_k127_3308566_20 Universal stress protein family - - - 0.00000000000000006616 87.0
CMS3_k127_3308566_21 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000001143 61.0
CMS3_k127_3308566_22 Colicin V production protein K03558 - - 0.0001785 51.0
CMS3_k127_3308566_3 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000644 262.0
CMS3_k127_3308566_4 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000007298 239.0
CMS3_k127_3308566_5 Prephenate dehydratase K04518,K14170 - 4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000008355 243.0
CMS3_k127_3308566_6 PFAM DNA repair protein RadC K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000003432 237.0
CMS3_k127_3308566_7 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0008614,GO:0009058,GO:0009108,GO:0009110,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016829,GO:0016840,GO:0016843,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0031668,GO:0032991,GO:0033554,GO:0034641,GO:0040007,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0071496,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1902494,GO:1903600 4.3.3.6 0.0000000000000000000000000000000000000000000000000000000000000008107 228.0
CMS3_k127_3308566_8 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000000003086 199.0
CMS3_k127_3308566_9 SMART HNH nuclease - - - 0.00000000000000000000000000000000000000000000000000002675 195.0
CMS3_k127_3348441_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 2.658e-195 622.0
CMS3_k127_3348441_1 Flavin-binding monooxygenase-like K14520 - 1.14.13.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000623 598.0
CMS3_k127_3348441_10 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.0000000000000000000005265 106.0
CMS3_k127_3348441_11 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000002119 99.0
CMS3_k127_3348441_12 PspC domain - - - 0.000000000000000000008362 105.0
CMS3_k127_3348441_13 Type IV leader peptidase family K02654 - 3.4.23.43 0.00000000000000004963 89.0
CMS3_k127_3348441_14 PFAM SCP-like extracellular - - - 0.00000000003972 74.0
CMS3_k127_3348441_15 protein containing a von Willebrand factor type A (vWA) domain - - - 0.000000009309 68.0
CMS3_k127_3348441_16 Pyridoxamine 5'-phosphate oxidase - - - 0.000000147 64.0
CMS3_k127_3348441_17 TadE-like protein - - - 0.0000004038 60.0
CMS3_k127_3348441_18 - - - - 0.00001856 56.0
CMS3_k127_3348441_19 DnaJ (Hsp40) homolog, subfamily C, member 4 K09524 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0006457,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0016020,GO:0035966,GO:0042221,GO:0050896,GO:0051082 - 0.00007664 55.0
CMS3_k127_3348441_2 Type II IV secretion system protein K02283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 484.0
CMS3_k127_3348441_3 COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM CutM homologs K03519,K11178 - 1.17.1.4,1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000003098 254.0
CMS3_k127_3348441_4 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000009127 230.0
CMS3_k127_3348441_5 ATPase MipZ K02282 - - 0.00000000000000000000000000000000000000000000000000000000003503 220.0
CMS3_k127_3348441_6 Type II secretion system K12511 - - 0.000000000000000000000000000000000000000003536 168.0
CMS3_k127_3348441_7 PFAM type II secretion system K12510 - - 0.0000000000000000000000000000000004803 145.0
CMS3_k127_3348441_8 peptidase C60 sortase A and B - - - 0.000000000000000000000000000567 123.0
CMS3_k127_3348441_9 ECF sigma factor K03088 - - 0.00000000000000000000001855 108.0
CMS3_k127_3365587_0 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006274 365.0
CMS3_k127_3365587_1 hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000001569 222.0
CMS3_k127_3365587_2 UPF0761 membrane protein K07058 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000004102 100.0
CMS3_k127_3365587_3 AAA domain - - - 0.0000000008439 67.0
CMS3_k127_3365587_4 Domain of unknown function (DUF4440) - - - 0.000000264 60.0
CMS3_k127_3379781_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 627.0
CMS3_k127_3379781_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005581 404.0
CMS3_k127_3379781_10 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006589 310.0
CMS3_k127_3379781_11 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000008544 245.0
CMS3_k127_3379781_12 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000002126 211.0
CMS3_k127_3379781_13 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000001786 158.0
CMS3_k127_3379781_14 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000006622 128.0
CMS3_k127_3379781_15 Belongs to the MraZ family K03925 - - 0.0000000000000000000001135 106.0
CMS3_k127_3379781_16 Cell division protein FtsQ K03589 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0071944 - 0.0000000001555 72.0
CMS3_k127_3379781_17 PFAM GCN5-related N-acetyltransferase - - - 0.000000001708 66.0
CMS3_k127_3379781_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004763 385.0
CMS3_k127_3379781_3 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008972 361.0
CMS3_k127_3379781_4 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006106 324.0
CMS3_k127_3379781_5 Penicillin-binding Protein dimerisation domain K03587,K08384 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008144,GO:0008150,GO:0008658,GO:0008955,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0031224,GO:0031226,GO:0031406,GO:0032153,GO:0033218,GO:0033293,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:1901363,GO:1901681 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 328.0
CMS3_k127_3379781_6 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005855 322.0
CMS3_k127_3379781_7 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 322.0
CMS3_k127_3379781_8 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006747 309.0
CMS3_k127_3379781_9 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 316.0
CMS3_k127_3463009_0 F420-dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003785 322.0
CMS3_k127_3463009_1 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000002354 263.0
CMS3_k127_3463009_10 Alpha/beta hydrolase family - - - 0.000000000000000000000000001544 122.0
CMS3_k127_3463009_11 acetyltransferase - - - 0.00000000000000000000000003978 118.0
CMS3_k127_3463009_12 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - - 0.000000000000000000000008783 108.0
CMS3_k127_3463009_13 lytic transglycosylase activity - - - 0.00000000000000000000001401 115.0
CMS3_k127_3463009_14 Succinylglutamate desuccinylase aspartoacylase - - - 0.0000000000000000000005861 107.0
CMS3_k127_3463009_15 Putative diguanylate phosphodiesterase - - - 0.00000000000000000007508 99.0
CMS3_k127_3463009_16 DNA-binding transcription factor activity - - - 0.000000000000000002427 89.0
CMS3_k127_3463009_17 - - - - 0.0000000000002014 80.0
CMS3_k127_3463009_18 Involved in the tonB-independent uptake of proteins - - - 0.0000002347 63.0
CMS3_k127_3463009_2 Peptidase dimerisation domain K13049 - - 0.000000000000000000000000000000000000000000000000000000000000000009836 241.0
CMS3_k127_3463009_3 Acetyl-CoA hydrolase/transferase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000002177 248.0
CMS3_k127_3463009_4 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000000000000002792 193.0
CMS3_k127_3463009_5 Na+/Pi-cotransporter - - - 0.00000000000000000000000000000000000000000005644 179.0
CMS3_k127_3463009_6 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000000000000000000004275 164.0
CMS3_k127_3463009_7 Peptidase M50 - - - 0.0000000000000000000000000000000000000001428 159.0
CMS3_k127_3463009_8 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.0000000000000000000000000000000000226 143.0
CMS3_k127_3463009_9 Metallo-beta-lactamase superfamily - GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0031974,GO:0034641,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 - 0.000000000000000000000000000000001464 142.0
CMS3_k127_3480020_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 5.374e-244 768.0
CMS3_k127_3480020_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 596.0
CMS3_k127_3480020_10 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000004834 262.0
CMS3_k127_3480020_11 Belongs to the ABC transporter superfamily K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005264 243.0
CMS3_k127_3480020_12 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000006689 257.0
CMS3_k127_3480020_13 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000001026 233.0
CMS3_k127_3480020_14 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000005009 213.0
CMS3_k127_3480020_15 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000003121 194.0
CMS3_k127_3480020_16 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000000004833 187.0
CMS3_k127_3480020_17 Polynucleotide adenylyltransferase region K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000237 168.0
CMS3_k127_3480020_18 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000002571 151.0
CMS3_k127_3480020_19 PFAM conserved K07027 - - 0.0000000000000000000000000000000216 140.0
CMS3_k127_3480020_2 PFAM Exonuclease, RNase T and DNA polymerase III K02342,K03722 - 2.7.7.7,3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 598.0
CMS3_k127_3480020_20 Protein of unknown function (DUF2889) K07053 - 3.1.3.97 0.000000000000000000000000000000048 143.0
CMS3_k127_3480020_21 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.0000000000000000001515 94.0
CMS3_k127_3480020_23 PFAM dihydropteroate synthase, DHPS K15023 - 2.1.1.258 0.00009187 53.0
CMS3_k127_3480020_3 TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 473.0
CMS3_k127_3480020_4 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006656 465.0
CMS3_k127_3480020_5 NADH dehydrogenase K00335,K18331 - 1.12.1.3,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 435.0
CMS3_k127_3480020_6 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007621 421.0
CMS3_k127_3480020_7 NAD(P)H binding domain of trans-2-enoyl-CoA reductase K00209 - 1.3.1.44,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 402.0
CMS3_k127_3480020_8 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 396.0
CMS3_k127_3480020_9 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003192 293.0
CMS3_k127_3557219_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 332.0
CMS3_k127_3557219_1 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000006616 217.0
CMS3_k127_3557219_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000003785 200.0
CMS3_k127_3557219_3 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000444 209.0
CMS3_k127_3557219_4 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000000000000000003803 90.0
CMS3_k127_358526_0 PFAM aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 1.578e-265 835.0
CMS3_k127_358526_1 catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the K01962,K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002689 441.0
CMS3_k127_358526_2 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001187 266.0
CMS3_k127_358526_3 AAA domain K07028 - - 0.0000000000000000000000000000000000000000000000000000000002503 230.0
CMS3_k127_358526_4 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000004333 203.0
CMS3_k127_358526_5 ThiS family K03636 - - 0.0000000000000615 75.0
CMS3_k127_358526_6 Mo-molybdopterin cofactor metabolic process - - - 0.00000005396 57.0
CMS3_k127_362884_0 Highly conserved protein containing a thioredoxin domain K06888 - - 3.693e-239 763.0
CMS3_k127_362884_1 PFAM Peptidase M1, membrane alanine aminopeptidase K01256,K08776 - 3.4.11.2 1.478e-198 649.0
CMS3_k127_362884_10 electron transfer activity K05337 - - 0.0000000000000000001782 89.0
CMS3_k127_362884_11 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.000000000000000003646 86.0
CMS3_k127_362884_12 Glyoxalase-like domain - - - 0.0000000001271 67.0
CMS3_k127_362884_2 Glutamine synthetase, beta-Grasp domain K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 527.0
CMS3_k127_362884_3 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 419.0
CMS3_k127_362884_4 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008024 370.0
CMS3_k127_362884_5 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000001825 224.0
CMS3_k127_362884_6 Acetyltransferase (GNAT) domain K00657 - 2.3.1.57 0.0000000000000000000000000000000000000000000000000007399 189.0
CMS3_k127_362884_7 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000333 199.0
CMS3_k127_362884_8 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.00000000000000000000000000006463 131.0
CMS3_k127_362884_9 SURF1-like protein K14998 - - 0.00000000000000000000000005594 117.0
CMS3_k127_3713291_0 selenium transferase K01042 - 2.9.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 298.0
CMS3_k127_3713291_1 Amidohydrolase family K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000003908 190.0
CMS3_k127_3713291_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family K00561 - 2.1.1.184 0.0000002007 58.0
CMS3_k127_372221_0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007387 491.0
CMS3_k127_372221_1 N,N-dimethylaniline monooxygenase activity K07222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000461 477.0
CMS3_k127_372221_2 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001389 254.0
CMS3_k127_372221_3 Luciferase-like monooxygenase K15854 - 1.14.14.3 0.0000000002999 63.0
CMS3_k127_372221_4 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.00000005295 57.0
CMS3_k127_372662_0 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 382.0
CMS3_k127_372662_1 Belongs to the class-I aminoacyl-tRNA synthetase family K15526 - 6.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008296 352.0
CMS3_k127_372662_10 helix_turn_helix, Lux Regulon - - - 0.00000005061 55.0
CMS3_k127_372662_11 von Willebrand factor type A domain - - - 0.000001927 60.0
CMS3_k127_372662_12 Beta-propeller repeat - - - 0.000009917 57.0
CMS3_k127_372662_2 Divalent cation transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 319.0
CMS3_k127_372662_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001131 285.0
CMS3_k127_372662_4 Domain of unknown function (DUF2437) - - - 0.0000000000000000000000000000000000000000000000000000000000000001501 230.0
CMS3_k127_372662_5 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.00000000000000000000000000000000000000000000000003307 201.0
CMS3_k127_372662_6 COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family - - - 0.000000000000000000000000000000000000542 146.0
CMS3_k127_372662_7 PFAM Alpha beta hydrolase - - - 0.00000000000000000000000002528 119.0
CMS3_k127_372662_8 Transcription factor zinc-finger K09981 - - 0.000000000004748 73.0
CMS3_k127_372662_9 Cysteine-rich secretory protein family - - - 0.000000000007241 75.0
CMS3_k127_37329_0 Belongs to the bacterial solute-binding protein 9 family K09818 - - 0.0000000000000000000000000000003107 128.0
CMS3_k127_37329_1 - K09932 - - 0.00000000000000006911 84.0
CMS3_k127_37329_2 Uncharacterized conserved protein (DUF2164) - - - 0.0000000000007908 73.0
CMS3_k127_37329_3 PFAM DinB family protein - - - 0.000000001268 64.0
CMS3_k127_378400_0 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004892 352.0
CMS3_k127_378400_1 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000003009 231.0
CMS3_k127_378400_2 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000001432 207.0
CMS3_k127_378400_3 L-valine transmembrane transporter activity - - - 0.000000000000000000000000000000000003201 147.0
CMS3_k127_378400_4 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000001064 58.0
CMS3_k127_3829746_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006553 424.0
CMS3_k127_3829746_1 Transcriptional regulatory protein, C terminal K07658 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006248 261.0
CMS3_k127_3829746_2 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000008533 217.0
CMS3_k127_3829746_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000003131 217.0
CMS3_k127_3829746_4 Sigma-70 region 3 K02405 - - 0.00000000000000000000000000000000000000000000000000000001631 208.0
CMS3_k127_3829746_5 Methyltransferase domain - - - 0.000000000000000000000000000000002553 137.0
CMS3_k127_3829746_6 response regulator K03413 - - 0.0000000000000008652 85.0
CMS3_k127_3829746_7 Carbon storage regulator K03563 - - 0.000002806 58.0
CMS3_k127_3829746_8 Peptidase, S41 K03797 - 3.4.21.102 0.0003543 52.0
CMS3_k127_3839007_0 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002459 429.0
CMS3_k127_3839007_1 N-acetyltransferase - - - 0.0000000000000000000000000000000000000000000000001901 193.0
CMS3_k127_3839007_2 NmrA-like family - - - 0.000000000000000000000000000000000000000000000001847 188.0
CMS3_k127_3839007_3 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000007817 158.0
CMS3_k127_3839007_4 - - - - 0.00000000000000000000000000009019 117.0
CMS3_k127_3847118_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 549.0
CMS3_k127_3847118_1 PFAM Acetyl-CoA hydrolase transferase K01067 - 3.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 478.0
CMS3_k127_3847118_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008746 318.0
CMS3_k127_3847118_3 Methyl-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000152 282.0
CMS3_k127_3847118_4 Esterase PHB depolymerase K03932 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004399 269.0
CMS3_k127_3847118_5 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000004206 238.0
CMS3_k127_3847118_6 CoA-transferase family III - - - 0.00000000000000000000000000000000006422 145.0
CMS3_k127_3847118_7 Chitinase class I K03791 - - 0.00000000000000002756 96.0
CMS3_k127_3847118_8 COG NOG14451 non supervised orthologous group - - - 0.0000003572 61.0
CMS3_k127_3847118_9 Ami_3 K01448 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.5.1.28 0.00001529 57.0
CMS3_k127_3851320_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1363.0
CMS3_k127_3851320_1 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008058 401.0
CMS3_k127_3851320_2 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004471 272.0
CMS3_k127_3851320_3 membrane transporter protein K07090 - - 0.00000000000000000000000000008402 126.0
CMS3_k127_3851320_4 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000002378 55.0
CMS3_k127_3853818_0 OmpA family - - - 0.0 1893.0
CMS3_k127_3853818_1 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 443.0
CMS3_k127_3862636_0 DNA helicase K03657 - 3.6.4.12 6.799e-211 664.0
CMS3_k127_3862636_1 ribosomal protein L11 K02687 - - 0.00000000000000000000001878 106.0
CMS3_k127_3871897_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008975 329.0
CMS3_k127_3871897_1 PFAM sodium calcium exchanger K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 297.0
CMS3_k127_3871897_2 - - - - 0.0000006561 56.0
CMS3_k127_3871897_3 Peptidase, S9A B C family, catalytic domain protein - - - 0.0009347 51.0
CMS3_k127_3882821_0 Deoxyribodipyrimidine photo-lyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006036 595.0
CMS3_k127_3882821_1 PFAM Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 424.0
CMS3_k127_3882821_2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001863 263.0
CMS3_k127_3882821_3 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007871 255.0
CMS3_k127_3882821_4 Alpha beta hydrolase K07019 - - 0.0000000000000000000000000000000000000001325 167.0
CMS3_k127_3882821_5 transcriptional regulator K22491 - - 0.0000000000000000000000000000000000001128 153.0
CMS3_k127_3882821_6 - - - - 0.00000000000000000000000000000000005567 140.0
CMS3_k127_3882821_7 PFAM Thioredoxin domain K05838 - - 0.000000000003295 78.0
CMS3_k127_3882821_8 Cyclic-di-AMP receptor - - - 0.00009244 50.0
CMS3_k127_3896000_0 Conserved region in glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 1501.0
CMS3_k127_3896000_1 PFAM EamA-like transporter family - - - 0.00000000001145 68.0
CMS3_k127_3901580_0 Belongs to the glycosyl hydrolase 31 family K01811 - 3.2.1.177 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008777 326.0
CMS3_k127_3901896_0 Thiamine pyrophosphate enzyme, central domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 463.0
CMS3_k127_3901896_1 PFAM SMP-30 Gluconolaconase LRE-like region K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006872 293.0
CMS3_k127_3901896_2 PFAM Enoyl-CoA hydratase isomerase K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000003991 268.0
CMS3_k127_3901896_3 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005822 247.0
CMS3_k127_3901896_4 Aldo/keto reductase family K18471 - - 0.00000000000000000000000000000000000000000000000000000000000000000005726 243.0
CMS3_k127_3901896_5 electron transfer activity K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114 - 0.0000000000000000000000000000000000000000000000000771 185.0
CMS3_k127_3901896_6 Alcohol dehydrogenase GroES-like domain K00098 - 1.1.1.264 0.00000000000000000000000000000000000000000000006412 182.0
CMS3_k127_3901896_7 PFAM Electron transfer flavoprotein domain K03522 - - 0.0000000000000000000000000000000000000000000001562 182.0
CMS3_k127_3901896_8 Protein of unknown function (DUF2889) K07053 - 3.1.3.97 0.0000000000000000000000000001714 123.0
CMS3_k127_3901896_9 PAP2 superfamily - - - 0.00000000000000000000000339 113.0
CMS3_k127_3902760_0 Peptidase family M3 K01392 - 3.4.24.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009842 604.0
CMS3_k127_3902760_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 583.0
CMS3_k127_3902760_10 Phage integrase, N-terminal SAM-like domain K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002117 299.0
CMS3_k127_3902760_11 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003149 287.0
CMS3_k127_3902760_12 Cytochrome P450 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002234 277.0
CMS3_k127_3902760_13 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002438 275.0
CMS3_k127_3902760_14 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001051 263.0
CMS3_k127_3902760_15 PFAM Haloacid dehalogenase domain protein hydrolase K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000007481 203.0
CMS3_k127_3902760_16 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000008217 197.0
CMS3_k127_3902760_17 HAD-hyrolase-like K07025 - - 0.00000000000000000000000000000000000000000000008536 179.0
CMS3_k127_3902760_18 Putative ATP-dependant zinc protease - - - 0.00000000000000000000000000000000000000000000033 172.0
CMS3_k127_3902760_19 YbaK prolyl-tRNA synthetase associated region - - - 0.00000000000000000000000000000000000000004393 157.0
CMS3_k127_3902760_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004436 539.0
CMS3_k127_3902760_20 Nitroreductase family - - - 0.0000000000000000000000000000000000004979 158.0
CMS3_k127_3902760_21 SnoaL-like domain - - - 0.00000000000000000000000000004349 128.0
CMS3_k127_3902760_22 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000000161 121.0
CMS3_k127_3902760_23 PFAM Flavin reductase like domain - - - 0.000000000000000000000000008339 119.0
CMS3_k127_3902760_24 Belongs to the amidase family K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000179 106.0
CMS3_k127_3902760_25 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000001949 108.0
CMS3_k127_3902760_26 4Fe-4S binding domain K05524 - - 0.00000000000000000000001063 108.0
CMS3_k127_3902760_27 stress protein (general stress protein 26) - - - 0.000000000000000000001198 100.0
CMS3_k127_3902760_28 glycerophosphoryl diester phosphodiesterase - - - 0.000000000000000000002176 111.0
CMS3_k127_3902760_29 Uncharacterized conserved protein (DUF2277) - - - 0.00000000000003941 74.0
CMS3_k127_3902760_3 ABC transporter K06147,K18890 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 549.0
CMS3_k127_3902760_30 KH domain K06960 - - 0.0000000000001202 77.0
CMS3_k127_3902760_31 Cell wall-active antibiotics response 4TMS YvqF - - - 0.000000000002366 74.0
CMS3_k127_3902760_32 thiolester hydrolase activity K06889 - - 0.00000000009221 72.0
CMS3_k127_3902760_33 - - - - 0.0000000002746 70.0
CMS3_k127_3902760_34 stress protein (general stress protein 26) - - - 0.000000851 59.0
CMS3_k127_3902760_4 Belongs to the RimK family K05844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000576 457.0
CMS3_k127_3902760_5 PFAM ABC transporter transmembrane region K06147,K18889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 453.0
CMS3_k127_3902760_6 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 430.0
CMS3_k127_3902760_7 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 403.0
CMS3_k127_3902760_8 cytochrome P450 K16593 GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.14.14.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007118 355.0
CMS3_k127_3902760_9 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 340.0
CMS3_k127_3927619_0 Oxidoreductase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007112 503.0
CMS3_k127_3927619_1 Cytochrome P450 - - - 0.000000000000000000000000000000000000000000000000000000000007766 228.0
CMS3_k127_3927619_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000008947 210.0
CMS3_k127_3927619_3 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000002265 54.0
CMS3_k127_3973112_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006562 446.0
CMS3_k127_3973112_1 carboxylic ester hydrolase activity K03929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005875 394.0
CMS3_k127_3973112_10 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005638 271.0
CMS3_k127_3973112_11 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001916 249.0
CMS3_k127_3973112_12 PFAM CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000001546 244.0
CMS3_k127_3973112_13 ABC transporter substrate-binding protein K02035 - - 0.0000000000000000000000000000000000000000000000000001214 207.0
CMS3_k127_3973112_14 Periplasmic binding protein LacI transcriptional regulator K02529 - - 0.0000000000000000000000000000000000000000000000000002544 198.0
CMS3_k127_3973112_16 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000000383 187.0
CMS3_k127_3973112_17 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000009714 192.0
CMS3_k127_3973112_18 PFAM Enoyl-CoA hydratase isomerase K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000003539 190.0
CMS3_k127_3973112_19 Chloramphenicol phosphotransferase-like protein - - - 0.000000000000000000000000000000000007446 143.0
CMS3_k127_3973112_2 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 377.0
CMS3_k127_3973112_20 Alpha beta hydrolase - - - 0.000000000000000000000000000000001519 140.0
CMS3_k127_3973112_21 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000002878 144.0
CMS3_k127_3973112_22 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.000000000000000000000000000009663 134.0
CMS3_k127_3973112_23 Lysyl oxidase - - - 0.00000000000000000000000000001876 130.0
CMS3_k127_3973112_24 Protein of unknown function (DUF2834) - - - 0.00000000000000000000000007008 110.0
CMS3_k127_3973112_25 ECF sigma factor - - - 0.00000000000000000000000008961 113.0
CMS3_k127_3973112_26 - - - - 0.000000000000000000000001173 111.0
CMS3_k127_3973112_27 - - - - 0.00000000000000000000000726 110.0
CMS3_k127_3973112_28 ribonuclease BN K07058 - - 0.000000000000000000009758 105.0
CMS3_k127_3973112_29 Copper binding proteins, plastocyanin/azurin family - - - 0.0000000000000002057 93.0
CMS3_k127_3973112_3 Belongs to the ABC transporter superfamily K02031,K02032,K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 358.0
CMS3_k127_3973112_30 lactoylglutathione lyase activity - - - 0.00000000000001639 78.0
CMS3_k127_3973112_32 Pyrrolo-quinoline quinone - - - 0.000000008993 68.0
CMS3_k127_3973112_33 Putative Flp pilus-assembly TadE/G-like - - - 0.000197 53.0
CMS3_k127_3973112_35 - - - - 0.000601 43.0
CMS3_k127_3973112_4 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 335.0
CMS3_k127_3973112_5 SERine Proteinase INhibitors K13963 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 340.0
CMS3_k127_3973112_6 CoA-transferase family III K07544 - 2.8.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007285 313.0
CMS3_k127_3973112_7 Enoyl-CoA hydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 307.0
CMS3_k127_3973112_8 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006572 299.0
CMS3_k127_3973112_9 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002327 278.0
CMS3_k127_3995849_0 ABC transporter transmembrane region K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005565 532.0
CMS3_k127_3995849_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 GO:0003674,GO:0003824,GO:0003942,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 313.0
CMS3_k127_3995849_10 RF-1 domain - - - 0.0000000000000000000000000000000000000000006331 165.0
CMS3_k127_3995849_11 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.00000000000000000000000000000000006242 145.0
CMS3_k127_3995849_12 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.7.77 0.00000000000000000000000000002743 133.0
CMS3_k127_3995849_13 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000528 122.0
CMS3_k127_3995849_14 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000004546 118.0
CMS3_k127_3995849_15 PFAM pyridoxamine 5'-phosphate - - - 0.000000000000000000000003468 112.0
CMS3_k127_3995849_16 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000001739 99.0
CMS3_k127_3995849_17 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000007389 84.0
CMS3_k127_3995849_18 TfoX N-terminal domain - - - 0.000000000001953 73.0
CMS3_k127_3995849_19 Helix-turn-helix domain - - - 0.0000000009447 65.0
CMS3_k127_3995849_2 Mg2 and Co2 transporter CorB K03699 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000004142 236.0
CMS3_k127_3995849_20 Transmembrane secretion effector - - - 0.00000002043 67.0
CMS3_k127_3995849_21 FecR protein - - - 0.0000002131 64.0
CMS3_k127_3995849_3 HAD-hyrolase-like K07025 - - 0.00000000000000000000000000000000000000000000000000000000001739 218.0
CMS3_k127_3995849_4 Sodium/calcium exchanger protein K07301 - - 0.000000000000000000000000000000000000000000000000000002775 203.0
CMS3_k127_3995849_5 mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000001417 199.0
CMS3_k127_3995849_6 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000009186 203.0
CMS3_k127_3995849_7 - - - - 0.00000000000000000000000000000000000000000000001259 181.0
CMS3_k127_3995849_8 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000004576 180.0
CMS3_k127_3995849_9 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000000000000000000000000000000008324 169.0
CMS3_k127_4002317_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1069.0
CMS3_k127_4009133_0 PFAM FAD linked oxidase domain protein K00803 - 2.5.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 398.0
CMS3_k127_4009133_1 Alpha/beta hydrolase family - - - 0.000000000000000000003607 95.0
CMS3_k127_401400_0 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000002991 109.0
CMS3_k127_401400_1 3-methyladenine DNA glycosylase - - - 0.00000000000000000003978 98.0
CMS3_k127_401400_2 Pkd domain containing protein - - - 0.0000008387 59.0
CMS3_k127_4015237_0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001002 288.0
CMS3_k127_4015237_1 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002947 266.0
CMS3_k127_4015237_10 serine threonine protein kinase - - - 0.00000000000000833 87.0
CMS3_k127_4015237_11 peroxiredoxin activity K03564 - 1.11.1.15 0.0000000004379 64.0
CMS3_k127_4015237_12 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000001917 61.0
CMS3_k127_4015237_13 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00006371 46.0
CMS3_k127_4015237_2 60Kd inner membrane protein K03217 - - 0.0000000000000000000000000000000000000000000002475 179.0
CMS3_k127_4015237_3 endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000001781 158.0
CMS3_k127_4015237_4 pfkB family carbohydrate kinase - - - 0.00000000000000000000000000000000003779 146.0
CMS3_k127_4015237_5 Lytic transglycosylase catalytic K08309 - - 0.000000000000000000000000000000000378 152.0
CMS3_k127_4015237_6 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding - - - 0.0000000000000000000000000008425 119.0
CMS3_k127_4015237_7 PFAM single-stranded nucleic acid binding R3H domain protein K06346 - - 0.000000000000000000000004578 116.0
CMS3_k127_4015237_8 Belongs to the 'phage' integrase family K04763 - - 0.00000000000000000000003718 104.0
CMS3_k127_4015237_9 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000002149 98.0
CMS3_k127_4044360_0 DNA-directed DNA polymerase K02337 - 2.7.7.7 0.0 1075.0
CMS3_k127_4044360_1 Heat shock 70 kDa protein K04043 - - 1.78e-259 814.0
CMS3_k127_4044360_10 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000533 246.0
CMS3_k127_4044360_11 von Willebrand factor type A domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000001456 228.0
CMS3_k127_4044360_12 PFAM transglutaminase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000002561 238.0
CMS3_k127_4044360_13 Ribosomal protein L11 methyltransferase K02687 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006480,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018011,GO:0018012,GO:0018022,GO:0018023,GO:0018193,GO:0018194,GO:0018205,GO:0019538,GO:0031365,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000001502 162.0
CMS3_k127_4044360_14 Peptidoglycan-binding LysM - - - 0.0000000000000000000000000000000000000001642 165.0
CMS3_k127_4044360_15 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.0000000000000000000000000000000000000003546 157.0
CMS3_k127_4044360_16 Lysin motif - - - 0.000000000000000000000000000000000003274 153.0
CMS3_k127_4044360_17 Tyrosine phosphatase family K01104 - 3.1.3.48 0.00000000000000000000000000000000005674 151.0
CMS3_k127_4044360_18 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000001004 139.0
CMS3_k127_4044360_19 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000003512 137.0
CMS3_k127_4044360_2 ACT domain K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 476.0
CMS3_k127_4044360_20 Protein tyrosine serine phosphatase K01104 - 3.1.3.48 0.00000000000000000000000000000002527 136.0
CMS3_k127_4044360_21 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000003953 129.0
CMS3_k127_4044360_22 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070042,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.193 0.00000000000000000000000000001402 136.0
CMS3_k127_4044360_23 PFAM von Willebrand factor type A domain K07114 - - 0.00000000000000000000000005409 125.0
CMS3_k127_4044360_24 - - - - 0.000000000000008174 86.0
CMS3_k127_4044360_3 ATPase associated with various cellular activities, AAA_5 K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 419.0
CMS3_k127_4044360_4 ATPase associated with various cellular K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 377.0
CMS3_k127_4044360_5 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 370.0
CMS3_k127_4044360_6 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003599 328.0
CMS3_k127_4044360_7 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005171 294.0
CMS3_k127_4044360_8 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004787 272.0
CMS3_k127_4044360_9 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000001326 240.0
CMS3_k127_4045084_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K00256 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002077 511.0
CMS3_k127_4045084_1 hydrolase activity, acting on ester bonds - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003838 256.0
CMS3_k127_4045084_2 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000004916 170.0
CMS3_k127_4047418_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.849e-240 756.0
CMS3_k127_4047418_1 DNA ligase K01971 - 6.5.1.1 8.197e-229 741.0
CMS3_k127_4047418_10 UbiA prenyltransferase family K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000589 263.0
CMS3_k127_4047418_11 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 GO:0000726,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006303,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0033554,GO:0034641,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050790,GO:0050896,GO:0051340,GO:0051351,GO:0051716,GO:0065007,GO:0065009,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000003512 237.0
CMS3_k127_4047418_12 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.00000000000000000000000000000000000000000000000000000000000000099 221.0
CMS3_k127_4047418_13 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000008513 225.0
CMS3_k127_4047418_14 Nodulation protein S (NodS) - - - 0.000000000000000000000000000000000000000000000000000000000000009598 229.0
CMS3_k127_4047418_15 Cytochrome C assembly protein K02195 - - 0.00000000000000000000000000000000000000000000000000000000001639 215.0
CMS3_k127_4047418_16 Cytochrome c oxidase subunit III K02276,K02299 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000004295 203.0
CMS3_k127_4047418_17 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000966 191.0
CMS3_k127_4047418_18 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000000000001014 181.0
CMS3_k127_4047418_19 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) - - - 0.000000000000000000000000000000000000000000003901 188.0
CMS3_k127_4047418_2 NAD synthase K01916 - 6.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008636 592.0
CMS3_k127_4047418_20 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000003229 178.0
CMS3_k127_4047418_21 Protein of unknown function (DUF1697) - - - 0.00000000000000000000000000000000000000008121 160.0
CMS3_k127_4047418_22 ABC transporter K02193 - 3.6.3.41 0.0000000000000000000000000000000000000006974 165.0
CMS3_k127_4047418_23 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000001563 151.0
CMS3_k127_4047418_24 PFAM cytochrome c-type biogenesis protein CcmB K02194 - - 0.0000000000000000000000004905 120.0
CMS3_k127_4047418_25 periplasmic protein thiol disulfide oxidoreductases, DsbE subfamily K02199 - - 0.000000000000000000000002283 111.0
CMS3_k127_4047418_26 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000001565 102.0
CMS3_k127_4047418_27 Cytochrome c - - - 0.00000000000007099 83.0
CMS3_k127_4047418_28 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000007596 74.0
CMS3_k127_4047418_29 subunit of a heme lyase K02200 - - 0.0000000002462 72.0
CMS3_k127_4047418_3 Cytochrome c-type biogenesis protein CcmF C-terminal K02198 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 497.0
CMS3_k127_4047418_30 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.0000000004448 71.0
CMS3_k127_4047418_31 PFAM SH3 type 3 domain protein - - - 0.00000001536 67.0
CMS3_k127_4047418_32 ROK family - - - 0.000001261 59.0
CMS3_k127_4047418_33 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0001528 51.0
CMS3_k127_4047418_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000293 342.0
CMS3_k127_4047418_5 acyl-CoA transferases carnitine dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005861 319.0
CMS3_k127_4047418_6 Protein of unknown function (DUF3179) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005263 315.0
CMS3_k127_4047418_7 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 304.0
CMS3_k127_4047418_8 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000494 289.0
CMS3_k127_4047418_9 ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009004 267.0
CMS3_k127_4087050_0 pyruvate dehydrogenase (acetyl-transferring) activity K00163 - 1.2.4.1 0.0 1198.0
CMS3_k127_4087050_1 Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006998 445.0
CMS3_k127_4087050_2 COG2030 Acyl dehydratase K14449 - 4.2.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 411.0
CMS3_k127_4087050_3 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008122 357.0
CMS3_k127_4087050_4 zinc ion binding K04486 - 3.1.3.15 0.0000000000000000000000000000000000000000000009571 177.0
CMS3_k127_4087050_5 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.000000000000000000000000000000000000000000007427 173.0
CMS3_k127_4087050_6 COG0508 Pyruvate 2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) K00627 - 2.3.1.12 0.000000000000000000000000216 116.0
CMS3_k127_4087050_7 Lactoylglutathione lyase K01759 GO:0003674,GO:0003824,GO:0004462,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016846,GO:0034641,GO:0043603,GO:0044237,GO:0051186,GO:0071704,GO:1901564 4.4.1.5 0.000001146 56.0
CMS3_k127_4087068_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 4.86e-251 796.0
CMS3_k127_4147010_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 5.203e-205 653.0
CMS3_k127_4147010_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 560.0
CMS3_k127_4147010_2 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000006871 263.0
CMS3_k127_4178866_0 PFAM Type II secretion system protein E K02283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009662 445.0
CMS3_k127_4178866_1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family K02282 - - 0.000000000000000000000000000000000000001597 166.0
CMS3_k127_4178866_2 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000000005574 91.0
CMS3_k127_4178866_3 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.000000000000001486 87.0
CMS3_k127_4181815_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 383.0
CMS3_k127_4181815_1 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 359.0
CMS3_k127_4181815_10 electron transfer activity K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114 - 0.0000000000000003712 81.0
CMS3_k127_4181815_12 N-terminal half of MaoC dehydratase - - - 0.0000000004135 69.0
CMS3_k127_4181815_2 2-Nitropropane dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 363.0
CMS3_k127_4181815_3 Phosphate ABC transporter substrate-binding protein, PhoT family K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 349.0
CMS3_k127_4181815_4 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006423 343.0
CMS3_k127_4181815_5 Transcriptional regulatory protein, C terminal K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007957 248.0
CMS3_k127_4181815_6 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000004313 227.0
CMS3_k127_4181815_7 PFAM ATP-binding region, ATPase domain protein K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000419 191.0
CMS3_k127_4181815_8 PFAM pyridoxamine 5'-phosphate oxidase-related - - - 0.00000000000000000000000000000000002157 139.0
CMS3_k127_4181815_9 MaoC like domain - - - 0.0000000000000001445 87.0
CMS3_k127_4188392_0 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008599 309.0
CMS3_k127_4188392_1 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000008355 243.0
CMS3_k127_4188392_2 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000361 112.0
CMS3_k127_4191783_0 PFAM aldo keto reductase K05882 - 1.1.1.91 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 470.0
CMS3_k127_4191783_1 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000000000001641 181.0
CMS3_k127_4191783_2 PFAM short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000003892 124.0
CMS3_k127_4191783_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000007236 118.0
CMS3_k127_4191783_4 PFAM FAD dependent oxidoreductase - - - 0.00000000000000000000000001987 115.0
CMS3_k127_4191783_5 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.0000000000000006966 91.0
CMS3_k127_419617_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 3.25e-206 654.0
CMS3_k127_419617_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009432 392.0
CMS3_k127_419617_2 Belongs to the peptidase M16 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009505 312.0
CMS3_k127_419617_3 DNA polymerase III, delta subunit, C terminal K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000005213 209.0
CMS3_k127_419617_4 PSP1 C-terminal conserved region - - - 0.000000000000000000000000000000000000000000001077 180.0
CMS3_k127_419617_5 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000001462 161.0
CMS3_k127_419617_6 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000009214 105.0
CMS3_k127_419617_7 helix-turn-helix domain protein - - - 0.0000000003479 67.0
CMS3_k127_419617_8 Protein of unknown function (DUF2851) - - - 0.000000001104 70.0
CMS3_k127_4198052_0 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008605 427.0
CMS3_k127_4198052_1 TIGRFAM daunorubicin resistance ABC transporter ATPase subunit K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 358.0
CMS3_k127_4198052_10 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000001041 117.0
CMS3_k127_4198052_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 334.0
CMS3_k127_4198052_3 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008122 293.0
CMS3_k127_4198052_4 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001802 280.0
CMS3_k127_4198052_5 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000172 259.0
CMS3_k127_4198052_6 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000659 219.0
CMS3_k127_4198052_7 Abc-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000002613 205.0
CMS3_k127_4198052_8 Abc-2 type transporter K01992 - - 0.00000000000000000000000000000000000003078 155.0
CMS3_k127_4198052_9 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000002551 129.0
CMS3_k127_4207798_0 Indole-3-glycerol phosphate synthase K01609 - 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000005297 224.0
CMS3_k127_4207798_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0004425,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000001057 186.0
CMS3_k127_4218863_0 Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000002633 200.0
CMS3_k127_4218863_1 CoA-transferase family III K07543 - 2.8.3.15 0.000000000000000000000000000005402 129.0
CMS3_k127_4234237_0 Belongs to the peptidase S8 family K01361 - 3.4.21.96 0.000000000000000000000000000000000000000000000000000000001227 221.0
CMS3_k127_4234237_1 RNase_H superfamily K07502 - - 0.0000000000000000000000000000000000007913 153.0
CMS3_k127_4234237_2 Sigma-70 region 2 K03088 - - 0.00000000000000000000000001432 117.0
CMS3_k127_425331_0 alpha beta - - - 0.0000000000000000000000000000000000003117 147.0
CMS3_k127_425331_1 SIS domain K00820 - 2.6.1.16 0.000000001916 66.0
CMS3_k127_4265246_0 PFAM Acetamidase Formamidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005615 333.0
CMS3_k127_4265728_0 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 379.0
CMS3_k127_4265728_1 - - - - 0.000000000000000002013 90.0
CMS3_k127_4265728_2 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01697,K01738,K12339 - 2.5.1.47,4.2.1.22 0.00000000000003324 72.0
CMS3_k127_4301036_0 Ribosomal RNA adenine dimethylase - - - 0.000000000000000000000000000000000000000000000000005106 191.0
CMS3_k127_4301036_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000001665 180.0
CMS3_k127_4301036_10 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000002319 80.0
CMS3_k127_4301036_2 dephospho-CoA kinase activity K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000006392 167.0
CMS3_k127_4301036_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000001246 158.0
CMS3_k127_4301036_4 epoxide hydrolase K21159 - - 0.000000000000000000000000000000000005087 140.0
CMS3_k127_4301036_5 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000001965 124.0
CMS3_k127_4301036_6 diguanylate cyclase - - - 0.000000000000000000000000005335 130.0
CMS3_k127_4301036_7 Cytidylyltransferase family K00981 - 2.7.7.41 0.000000000000000000000001919 109.0
CMS3_k127_4301036_8 - - - - 0.0000000000000000000004135 103.0
CMS3_k127_4301036_9 - - - - 0.00000000000000000000564 98.0
CMS3_k127_4308788_0 Belongs to the isocitrate and isopropylmalate dehydrogenases family K00031 - 1.1.1.42 3.562e-208 656.0
CMS3_k127_4308788_1 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K19312 GO:0003674,GO:0003824,GO:0004658,GO:0016421,GO:0016874,GO:0016885 2.1.3.15,6.4.1.2,6.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000853 614.0
CMS3_k127_4308788_10 PA domain - - - 0.0000000000000000000000000000000000000002321 166.0
CMS3_k127_4308788_11 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.00000000000000000000000000000003291 130.0
CMS3_k127_4308788_12 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000005575 131.0
CMS3_k127_4308788_13 Chitinase class I K03791 - - 0.000000000008137 74.0
CMS3_k127_4308788_14 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00001507 49.0
CMS3_k127_4308788_2 Hydantoinaseoxoprolinase domain protein K01473 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009177 575.0
CMS3_k127_4308788_3 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 565.0
CMS3_k127_4308788_4 Required for morphogenesis under gluconeogenic growth conditions - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 381.0
CMS3_k127_4308788_5 Belongs to the LDH MDH superfamily. LDH family K00016,K00024 - 1.1.1.27,1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 347.0
CMS3_k127_4308788_6 Radical SAM domain protein K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004072 327.0
CMS3_k127_4308788_7 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 302.0
CMS3_k127_4308788_8 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000666 245.0
CMS3_k127_4308788_9 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000000000000002915 237.0
CMS3_k127_4319577_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 501.0
CMS3_k127_4319577_1 C-terminal domain of 1-Cys peroxiredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005203 317.0
CMS3_k127_4319577_10 D-alanyl-D-alanine carboxypeptidase K17733 - - 0.0000000003905 70.0
CMS3_k127_4319577_2 PFAM von Willebrand factor type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000002891 240.0
CMS3_k127_4319577_3 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000001314 220.0
CMS3_k127_4319577_4 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000001129 211.0
CMS3_k127_4319577_5 D-alanyl-D-alanine carboxypeptidase - - - 0.0000000000000000000000000000000000000000000008991 176.0
CMS3_k127_4319577_6 Protein of unknown function (DUF1524) - - - 0.00000000000000000000000000000000000004669 152.0
CMS3_k127_4319577_7 Toxic anion resistance - - - 0.0000000000000000000000000000003163 137.0
CMS3_k127_4319577_8 - - - - 0.00000000000000000000000000005165 131.0
CMS3_k127_4319577_9 Domain of unknown function (DUF5050) - - - 0.000000000000000000000000001778 130.0
CMS3_k127_43200_0 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 300.0
CMS3_k127_43200_1 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000001141 218.0
CMS3_k127_43200_2 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000001443 218.0
CMS3_k127_43200_3 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000002574 183.0
CMS3_k127_43200_4 KR domain - - - 0.00000000000000000000000000000000000000002092 164.0
CMS3_k127_43200_5 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00046 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0008874,GO:0008875,GO:0016491,GO:0016614,GO:0016616,GO:0036094,GO:0042802,GO:0042803,GO:0046983,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.1.1.69 0.000000000000000000000000000000000002889 148.0
CMS3_k127_43200_6 coenzyme F420 binding - - - 0.00000000000000000000000005641 113.0
CMS3_k127_43200_7 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000001047 110.0
CMS3_k127_43200_8 RDD family - GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.00000004847 63.0
CMS3_k127_4320734_0 PQQ enzyme repeat K05889,K12132 - 1.1.2.6,2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008542 324.0
CMS3_k127_4320734_1 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001188 287.0
CMS3_k127_4320734_2 Receptor family ligand binding region - - - 0.000000000000000000000000000000000000000004725 166.0
CMS3_k127_4320734_3 Aldo/keto reductase family - - - 0.0000000000517 64.0
CMS3_k127_4320734_4 Ecdysteroid kinase - - - 0.000001001 61.0
CMS3_k127_4331742_0 Voltage gated chloride channel K03281 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006468 389.0
CMS3_k127_4331742_1 PFAM Cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 332.0
CMS3_k127_4331742_2 cytochrome p450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006575 252.0
CMS3_k127_4331742_3 Histidine triad (HIT) protein K02503 - - 0.00000000000000000000000000000000003353 139.0
CMS3_k127_44333_0 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 398.0
CMS3_k127_44333_1 PFAM Mandelate racemase muconate lactonizing K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007011 280.0
CMS3_k127_44333_2 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.000000000003531 72.0
CMS3_k127_444606_0 Elongation factor G C-terminus K06207 - - 7.55e-268 836.0
CMS3_k127_444606_1 PFAM Transketolase K21417 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 383.0
CMS3_k127_444606_2 e3 binding domain K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000305 248.0
CMS3_k127_444606_3 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000008309 80.0
CMS3_k127_444606_4 COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit K21416 - - 0.0001134 46.0
CMS3_k127_444606_5 antibiotic catabolic process K18235 - - 0.000357 50.0
CMS3_k127_4472687_0 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008483 479.0
CMS3_k127_4472687_1 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 444.0
CMS3_k127_4472687_10 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000009749 199.0
CMS3_k127_4472687_11 Histidine kinase - - - 0.000000000000000000000000000000000000000003177 162.0
CMS3_k127_4472687_12 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000003459 168.0
CMS3_k127_4472687_13 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000001235 136.0
CMS3_k127_4472687_14 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000008299 137.0
CMS3_k127_4472687_15 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000001039 124.0
CMS3_k127_4472687_16 Glyoxalase-like domain K05606 - 5.1.99.1 0.0000000000000000000004407 101.0
CMS3_k127_4472687_17 ABC-2 family transporter protein K01992 - - 0.00000000000000001502 97.0
CMS3_k127_4472687_18 GYD domain - - - 0.00000000000000166 83.0
CMS3_k127_4472687_19 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000001042 85.0
CMS3_k127_4472687_2 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases K00320 - 1.5.98.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004521 349.0
CMS3_k127_4472687_20 CoA-transferase family III K07749 - 2.8.3.16 0.000000000002206 71.0
CMS3_k127_4472687_22 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively K01243 - 3.2.2.9 0.000009077 56.0
CMS3_k127_4472687_3 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006134 300.0
CMS3_k127_4472687_4 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002569 277.0
CMS3_k127_4472687_5 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001101 261.0
CMS3_k127_4472687_6 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000002564 232.0
CMS3_k127_4472687_7 Sodium/calcium exchanger protein - - - 0.0000000000000000000000000000000000000000000000000000000000001621 233.0
CMS3_k127_4472687_8 CoA-transferase family III K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000004085 227.0
CMS3_k127_4472687_9 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000007523 210.0
CMS3_k127_4521943_0 belongs to the sigma-70 factor family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 474.0
CMS3_k127_4521943_1 PFAM FAD linked oxidase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005352 262.0
CMS3_k127_4521943_2 YCII-related domain - - - 0.0000000000000000000000000000004404 126.0
CMS3_k127_4577039_0 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 486.0
CMS3_k127_4577039_1 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 - 2.4.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 351.0
CMS3_k127_4577039_2 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 305.0
CMS3_k127_4577039_3 (ABC) transporter K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000001611 219.0
CMS3_k127_4577039_4 Periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000003097 214.0
CMS3_k127_4577039_5 PFAM ATP corrinoid adenosyltransferase BtuR CobO CobP K19221 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000088 199.0
CMS3_k127_4577039_6 COG2087 Adenosyl cobinamide kinase adenosyl cobinamide phosphate guanylyltransferase K02231 - 2.7.1.156,2.7.7.62 0.0000000000000000000000000000000000000000000000000002852 190.0
CMS3_k127_4577039_7 C-terminal PDZ domain K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000005845 192.0
CMS3_k127_4577039_8 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.00000000000000000000000001419 119.0
CMS3_k127_4584635_0 arsR family - - - 0.0000000000000000000000000000005294 125.0
CMS3_k127_4584635_1 acyl-CoA dehydrogenase - - - 0.0000000000004392 73.0
CMS3_k127_4584635_2 Belongs to the arylamine N-acetyltransferase family K00675,K15466 - 2.3.1.118 0.0000001195 63.0
CMS3_k127_45905_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 551.0
CMS3_k127_45905_1 PFAM glycosyl transferase, family 51 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 495.0
CMS3_k127_45905_10 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000006156 107.0
CMS3_k127_45905_2 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001244 292.0
CMS3_k127_45905_3 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000002802 231.0
CMS3_k127_45905_4 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000006494 181.0
CMS3_k127_45905_5 response regulator K07667 - - 0.0000000000000000000000000000000000000000000001627 177.0
CMS3_k127_45905_6 response regulator, receiver K02483,K07667 - - 0.0000000000000000000000000000000000000000002087 172.0
CMS3_k127_45905_7 thiolester hydrolase activity K06889 - - 0.00000000000000000000000000000000001415 146.0
CMS3_k127_45905_8 Response regulator receiver K07667 - - 0.000000000000000000000000000000003965 139.0
CMS3_k127_45905_9 Flavin-binding monooxygenase-like K14520 - 1.14.13.84 0.0000000000000000000000001161 115.0
CMS3_k127_465451_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458,K14660 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 456.0
CMS3_k127_465451_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 442.0
CMS3_k127_465451_10 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000000000000000000000001253 154.0
CMS3_k127_465451_11 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000000005958 139.0
CMS3_k127_465451_12 Peptidase MA superfamily - - - 0.00000000000000000000000000007107 134.0
CMS3_k127_465451_13 TIGRFAM Glutaredoxin-like domain protein - - - 0.000000000000001465 90.0
CMS3_k127_465451_14 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000724 63.0
CMS3_k127_465451_2 PFAM phosphoesterase, RecJ domain protein K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004377 402.0
CMS3_k127_465451_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007058 388.0
CMS3_k127_465451_4 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 342.0
CMS3_k127_465451_5 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007204 320.0
CMS3_k127_465451_6 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 323.0
CMS3_k127_465451_7 Glycosyl transferases group 1 K08256 - 2.4.1.345 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008624 327.0
CMS3_k127_465451_8 Acyl transferase domain K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000004153 258.0
CMS3_k127_465451_9 SMART phosphoesterase PHP domain protein - - - 0.00000000000000000000000000000000000000066 160.0
CMS3_k127_4776673_0 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005591 561.0
CMS3_k127_4776673_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003844 478.0
CMS3_k127_4776673_10 - - - - 0.0000004852 53.0
CMS3_k127_4776673_2 double-stranded DNA 3'-5' exodeoxyribonuclease activity K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000827 329.0
CMS3_k127_4776673_3 Oxidoreductase molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008702 293.0
CMS3_k127_4776673_4 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000008477 242.0
CMS3_k127_4776673_5 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000002443 126.0
CMS3_k127_4776673_6 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.4.23.36 0.000000000000000000000005373 108.0
CMS3_k127_4776673_7 SnoaL-like polyketide cyclase - - - 0.00000000000008637 76.0
CMS3_k127_4776673_8 protein conserved in bacteria K07401 - - 0.000000008711 59.0
CMS3_k127_4776673_9 - - - - 0.00000005856 57.0
CMS3_k127_4776871_0 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000003739 219.0
CMS3_k127_4776871_1 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000001061 220.0
CMS3_k127_4776871_2 PFAM transcriptional activator domain - - - 0.000000000000000000000000000000000000000000001106 191.0
CMS3_k127_4776871_3 Glyoxalase-like domain - - - 0.00000000000000000000000000000000000000000008081 163.0
CMS3_k127_4776871_4 regulatory protein TetR - - - 0.0000000000000000000000000000000000000002896 158.0
CMS3_k127_4776871_5 Aminoglycoside phosphotransferase - - - 0.000000000000000000000000000000003176 144.0
CMS3_k127_4776871_6 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000009084 122.0
CMS3_k127_4776871_7 Serine aminopeptidase, S33 - - - 0.0000000000000001288 90.0
CMS3_k127_4776871_8 Domain of unknown function (DUF1905) - - - 0.000000001489 63.0
CMS3_k127_4776871_9 AhpC/TSA antioxidant enzyme - - - 0.0003381 48.0
CMS3_k127_4783060_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 340.0
CMS3_k127_4783060_1 XdhC and CoxI family K07402 - - 0.000000000000000000000000000000000000000000003389 175.0
CMS3_k127_4783060_2 hydrolase (HAD superfamily) K07025 - - 0.000000000000000000001959 106.0
CMS3_k127_4783060_3 molybdopterin cofactor binding K07402 - - 0.000000000000000000004037 96.0
CMS3_k127_4783060_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000003203 61.0
CMS3_k127_4783060_5 amine dehydrogenase activity K06978,K13730,K21105 - 3.1.1.102 0.0000797 55.0
CMS3_k127_4787388_0 reductase K14446 - 1.3.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 575.0
CMS3_k127_4787388_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 GO:0006355,GO:0006464,GO:0006807,GO:0006808,GO:0007154,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0018175,GO:0018177,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070887,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0080090,GO:0090293,GO:1901564,GO:1901698,GO:1901699,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 2.7.7.59 0.0000000000000000001463 94.0
CMS3_k127_4804724_0 Belongs to the ABC transporter superfamily K02052 - - 0.000000000000000000000000000000000000000000000000000000000000000000001531 248.0
CMS3_k127_4804724_1 ABC-type Fe3 transport system permease component K02011,K02063 - - 0.000000000000000000000000000000000000000000000000000000003679 206.0
CMS3_k127_4814749_0 AMP-binding enzyme C-terminal domain K18661 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004391 604.0
CMS3_k127_4814749_1 Berberine and berberine like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 537.0
CMS3_k127_4814749_10 TIGRFAM phosphonopyruvate decarboxylase-related protein K15635 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000005207 239.0
CMS3_k127_4814749_11 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000002365 228.0
CMS3_k127_4814749_12 SpoU rRNA Methylase family - - - 0.000000000000000000000000000000000000000000000000000000000000001904 226.0
CMS3_k127_4814749_13 acyl-CoA transferase carnitine dehydratase K18702 - 2.8.3.19 0.000000000000000000000000000000000000000000000000000000000000004476 233.0
CMS3_k127_4814749_14 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000001435 219.0
CMS3_k127_4814749_15 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000000000000000000000000000000000000000000000001795 217.0
CMS3_k127_4814749_16 Prolyl oligopeptidase family K06889 - - 0.000000000000000000000000000000000000000000000000000000001611 224.0
CMS3_k127_4814749_17 Belongs to the sulfur carrier protein TusA family - - - 0.000000000000000000000000000000000000000000000000000000002456 214.0
CMS3_k127_4814749_18 Major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000002745 209.0
CMS3_k127_4814749_19 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000000000000000000000000000000000000000006457 184.0
CMS3_k127_4814749_2 PFAM peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006021 479.0
CMS3_k127_4814749_20 PFAM EamA-like transporter family - - - 0.000000000000000000000000000000000000000000005715 175.0
CMS3_k127_4814749_21 cytidyltransferase-related domain K00952 - 2.7.7.1 0.00000000000000000000000000000000000000000003756 170.0
CMS3_k127_4814749_22 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.00000000000000000000000000000000000004215 148.0
CMS3_k127_4814749_23 Crp-like helix-turn-helix domain K10914 - - 0.000000000000000000000000000000002069 138.0
CMS3_k127_4814749_24 Phosphatase K20074 - 3.1.3.16 0.000000000000000000000000000000003262 138.0
CMS3_k127_4814749_25 DinB superfamily - - - 0.00000000000000000000006534 106.0
CMS3_k127_4814749_26 Large-conductance mechanosensitive channel, MscL - - - 0.000000000000000000003693 105.0
CMS3_k127_4814749_27 YceI-like domain - - - 0.00000000000000000003749 104.0
CMS3_k127_4814749_28 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000001616 94.0
CMS3_k127_4814749_29 cyclic nucleotide binding K09766,K10914 - - 0.0000000000000000007465 92.0
CMS3_k127_4814749_3 (ABC) transporter K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003333 438.0
CMS3_k127_4814749_30 Protein of unknown function (DUF3105) - - - 0.00000000000000003442 92.0
CMS3_k127_4814749_31 - - - - 0.000000000000001005 89.0
CMS3_k127_4814749_32 - - - - 0.000000003464 64.0
CMS3_k127_4814749_33 FtsX-like permease family K02004 - - 0.000000007876 67.0
CMS3_k127_4814749_34 PFAM Glycosyl transferase family 2 K00694 - 2.4.1.12 0.00008611 53.0
CMS3_k127_4814749_4 Adenylosuccinate lyase C-terminus K01756,K01857 - 4.3.2.2,5.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 419.0
CMS3_k127_4814749_5 2-dehydropantoate 2-reductase K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 396.0
CMS3_k127_4814749_6 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 381.0
CMS3_k127_4814749_7 aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 368.0
CMS3_k127_4814749_8 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 343.0
CMS3_k127_4814749_9 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 330.0
CMS3_k127_4819201_0 cytochrome P450 K00493,K21257 - 1.14.14.1 0.00000000000000000000000000000000000000000000000000000000000000000000005849 255.0
CMS3_k127_4819201_1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid K00020 - 1.1.1.31 0.0000000000000000000000000000000001647 139.0
CMS3_k127_4819201_2 F420H(2)-dependent quinone reductase - - - 0.0000000000000000000000000000001553 130.0
CMS3_k127_4819201_3 PFAM Rieske 2Fe-2S domain protein K00363,K05710 - 1.7.1.15 0.0000000000000000000002871 102.0
CMS3_k127_4821917_0 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) - - - 0.0000000000000000000001361 114.0
CMS3_k127_4821917_1 Bacterial transcriptional activator domain - - - 0.0000000000134 78.0
CMS3_k127_4835236_0 Formate--tetrahydrofolate ligase K01938 - 6.3.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 549.0
CMS3_k127_4835236_1 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 497.0
CMS3_k127_4835236_10 Ecdysteroid kinase - - - 0.0000000000000000000000000000000000000000001723 172.0
CMS3_k127_4835236_11 phosphonoacetaldehyde hydrolase activity K07025 - - 0.000000000000000000000000006921 121.0
CMS3_k127_4835236_12 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000008382 127.0
CMS3_k127_4835236_13 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00003002 48.0
CMS3_k127_4835236_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006922 436.0
CMS3_k127_4835236_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003941 417.0
CMS3_k127_4835236_4 TrkA-C domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 379.0
CMS3_k127_4835236_5 Peptidase M16 K07263,K07623 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 342.0
CMS3_k127_4835236_6 CoA-transferase family III K07749,K14471,K14472 - 2.8.3.16,2.8.3.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007993 287.0
CMS3_k127_4835236_7 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004694 279.0
CMS3_k127_4835236_8 PFAM band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001277 267.0
CMS3_k127_4835236_9 Membrane-bound serine protease (ClpP class) K07403 - - 0.00000000000000000000000000000000000000000000000000000002465 214.0
CMS3_k127_4838515_0 Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001751 267.0
CMS3_k127_4838515_1 ATPases associated with a variety of cellular activities K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000001609 245.0
CMS3_k127_4838515_2 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000001736 233.0
CMS3_k127_4838515_4 Enoyl-(Acyl carrier protein) reductase K00059,K19550 - 1.1.1.100 0.00000000000000000000000000000000000000000000000002972 190.0
CMS3_k127_4838515_5 Periplasmic binding protein K02016 - - 0.0000000000000000007349 98.0
CMS3_k127_4838515_6 COG2366 Protein related to penicillin acylase K01434 - 3.5.1.11 0.000000000002243 70.0
CMS3_k127_4838515_7 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K07025 - - 0.0000000000117 75.0
CMS3_k127_4838515_8 - - - - 0.00000001155 67.0
CMS3_k127_4839012_0 FMN-dependent dehydrogenase K16422 - 1.1.3.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 475.0
CMS3_k127_4839012_1 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000006442 237.0
CMS3_k127_4839012_2 endonuclease activity - - - 0.000000000000000002889 92.0
CMS3_k127_4846705_0 Belongs to the arginase family K01480 - 3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 394.0
CMS3_k127_4846705_1 -acetyltransferase - - - 0.000002307 60.0
CMS3_k127_4851561_0 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 375.0
CMS3_k127_4851561_1 Lrp/AsnC ligand binding domain - - - 0.0000000000001835 74.0
CMS3_k127_4859935_0 COG0433 Predicted ATPase K06915 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005791 542.0
CMS3_k127_4859935_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00122,K00335,K17992 - 1.12.1.3,1.17.1.9,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006257 291.0
CMS3_k127_4859935_2 P-loop containing region of AAA domain K03546 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009472 284.0
CMS3_k127_4859935_3 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03547 - - 0.000000000000000000000000000000000000000000000000000000000000000006302 245.0
CMS3_k127_4859935_4 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00123 - 1.17.1.9 0.000000000000000000000000004723 118.0
CMS3_k127_4859935_5 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000009808 120.0
CMS3_k127_4859935_6 COGs COG2380 conserved K09785 - - 0.00000000000000000000001193 113.0
CMS3_k127_4859935_7 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.000000000005747 72.0
CMS3_k127_4870525_0 cytochrome P450 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004221 344.0
CMS3_k127_4870525_1 PFAM amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000006098 230.0
CMS3_k127_4898713_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 589.0
CMS3_k127_4898713_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007187 554.0
CMS3_k127_4898713_10 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B gamma epsilon subunits K00966 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000009292 255.0
CMS3_k127_4898713_11 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000000000000005557 237.0
CMS3_k127_4898713_12 Bacterial phospho-glucose isomerase C-terminal SIS domain K15916 - 5.3.1.8,5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000003148 238.0
CMS3_k127_4898713_13 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0003674,GO:0003824,GO:0004017,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000385 241.0
CMS3_k127_4898713_14 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000000003444 216.0
CMS3_k127_4898713_15 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000374 201.0
CMS3_k127_4898713_16 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000006455 193.0
CMS3_k127_4898713_17 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000001692 189.0
CMS3_k127_4898713_18 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.0000000000000000000000000000000000000000000000000447 188.0
CMS3_k127_4898713_19 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000008879 179.0
CMS3_k127_4898713_2 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01835,K01840 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 488.0
CMS3_k127_4898713_20 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000000000000000000000000001284 184.0
CMS3_k127_4898713_21 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000003576 181.0
CMS3_k127_4898713_22 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000004291 169.0
CMS3_k127_4898713_23 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000004232 159.0
CMS3_k127_4898713_24 ribosomal protein l17 K02879 - - 0.00000000000000000000000000000000000000207 149.0
CMS3_k127_4898713_25 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000002478 147.0
CMS3_k127_4898713_26 binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000001553 136.0
CMS3_k127_4898713_27 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0008150,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000001005 130.0
CMS3_k127_4898713_28 Methyltransferase type 12 - - - 0.000000000000000000000000000005369 129.0
CMS3_k127_4898713_29 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.0000000000000000000000000002829 117.0
CMS3_k127_4898713_3 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424 481.0
CMS3_k127_4898713_30 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000002846 122.0
CMS3_k127_4898713_31 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.0000000000000000000001271 99.0
CMS3_k127_4898713_32 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000009948 92.0
CMS3_k127_4898713_33 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000002261 93.0
CMS3_k127_4898713_34 FR47-like protein - - - 0.0000000000000391 83.0
CMS3_k127_4898713_35 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.0000000004588 66.0
CMS3_k127_4898713_4 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 323.0
CMS3_k127_4898713_5 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003317 324.0
CMS3_k127_4898713_6 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007424 318.0
CMS3_k127_4898713_7 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 307.0
CMS3_k127_4898713_8 PFAM Bacterial low temperature requirement A protein (LtrA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002614 275.0
CMS3_k127_4898713_9 Metallopeptidase family M24 K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000001256 264.0
CMS3_k127_4918943_0 Acetamidase/Formamidase family K01455 - 3.5.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002697 331.0
CMS3_k127_4993553_0 ATP-grasp domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 368.0
CMS3_k127_4993553_1 protein maturation K13628 - - 0.0000000000001745 75.0
CMS3_k127_5022606_0 Belongs to the ClpA ClpB family K03696 - - 3.41e-304 953.0
CMS3_k127_5022606_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006865 291.0
CMS3_k127_5022606_2 SIR2-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000004438 222.0
CMS3_k127_5022606_3 Sulfite exporter TauE/SafE - - - 0.0000000000000000000000000000000000000000000000000000001294 202.0
CMS3_k127_5022606_4 major facilitator superfamily - - - 0.000000000000000000000000000005575 132.0
CMS3_k127_5022606_5 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.000000000000000000000000000343 125.0
CMS3_k127_5022606_6 Transcriptional regulator K13640 - - 0.00000000000000000000000001222 113.0
CMS3_k127_5022606_7 - - - - 0.00000000005372 66.0
CMS3_k127_5022606_8 Hsp20/alpha crystallin family K13993 - - 0.000000003518 65.0
CMS3_k127_5035559_0 Belongs to the glycosyl hydrolase 31 family K01811 - 3.2.1.177 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 346.0
CMS3_k127_5035559_1 Beta-lactamase K01286 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000002388 261.0
CMS3_k127_5035559_2 COG0332 3-oxoacyl- acyl-carrier-protein synthase III K16872 - 2.3.1.207 0.000000000000006419 74.0
CMS3_k127_5038082_0 AIR synthase related protein, C-terminal domain K01952 - 6.3.5.3 4.833e-232 743.0
CMS3_k127_5038082_1 Belongs to the glutamate synthase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000898 431.0
CMS3_k127_5038082_10 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000001872 71.0
CMS3_k127_5038082_11 - - - - 0.00000006238 55.0
CMS3_k127_5038082_12 Cytochrome C oxidase, cbb3-type, subunit III K19344 - - 0.0000007024 61.0
CMS3_k127_5038082_13 Cytochrome c K17222 - - 0.0001088 54.0
CMS3_k127_5038082_14 NUDIX domain - - - 0.0002845 49.0
CMS3_k127_5038082_2 Domain of unknown function (DUF4405) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 351.0
CMS3_k127_5038082_3 7TM receptor with intracellular HD hydrolase K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 330.0
CMS3_k127_5038082_4 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000003217 267.0
CMS3_k127_5038082_5 Participates in initiation and elongation during chromosome replication K02314 GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 0.0000000000000000000000000000000000000353 153.0
CMS3_k127_5038082_6 Cytochrome b(C-terminal)/b6/petD - - - 0.00000000000000000000000000000000005918 146.0
CMS3_k127_5038082_7 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000001285 137.0
CMS3_k127_5038082_8 YqeY-like protein K09117 - - 0.000000000000000000000000000001674 125.0
CMS3_k127_5038082_9 PFAM Rieske 2Fe-2S domain K02636 - 1.10.9.1 0.00000000000000000000000001927 117.0
CMS3_k127_5048678_0 PFAM Uracil-DNA glycosylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006145 248.0
CMS3_k127_5048678_1 NIPSNAP - - - 0.00000000000000000000000000000007583 126.0
CMS3_k127_5048678_2 GYD domain - - - 0.00000000000000000002531 93.0
CMS3_k127_5048678_3 Putative zinc ribbon domain - - - 0.00000000006939 71.0
CMS3_k127_5113958_0 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000231 278.0
CMS3_k127_5113958_1 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001495 273.0
CMS3_k127_5113958_2 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000999 256.0
CMS3_k127_5113958_3 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.0000000000000000000000000000000000000000000000000000000005551 220.0
CMS3_k127_5113958_4 NHL repeat - - - 0.0000000000000000000000000000000000002246 157.0
CMS3_k127_5113958_5 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000004963 138.0
CMS3_k127_5113958_6 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain - - - 0.0000000000000000000000000000002869 127.0
CMS3_k127_5113958_7 AAA ATPase domain - - - 0.00000000000000000000000000002917 137.0
CMS3_k127_5113958_8 PFAM alpha beta hydrolase fold K01055 - 3.1.1.24 0.00000000000000000000000009521 117.0
CMS3_k127_5113958_9 PFAM DNA polymerase beta domain protein region - - - 0.000006181 57.0
CMS3_k127_5123135_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 1.087e-227 719.0
CMS3_k127_5123135_1 Belongs to the beta-ketoacyl-ACP synthases family K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004392 415.0
CMS3_k127_5123135_10 PFAM Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000000000006314 154.0
CMS3_k127_5123135_11 Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000000001792 143.0
CMS3_k127_5123135_12 Mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000219 138.0
CMS3_k127_5123135_13 Patatin-like phospholipase K07001 GO:0003674,GO:0003824,GO:0016787 - 0.000000000000000000000000000005513 137.0
CMS3_k127_5123135_14 Uncharacterized protein conserved in bacteria (DUF2344) - - - 0.00000000004782 63.0
CMS3_k127_5123135_15 cyclic nucleotide-binding K10914 - - 0.0000003198 63.0
CMS3_k127_5123135_16 Protein of unknown function (DUF1706) - - - 0.0001758 50.0
CMS3_k127_5123135_2 Predicted membrane protein (DUF2207) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003507 419.0
CMS3_k127_5123135_3 MMPL family K06994,K20470 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007296 390.0
CMS3_k127_5123135_4 RQC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 335.0
CMS3_k127_5123135_5 CorA-like Mg2+ transporter protein K16074 GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0015562,GO:0016020,GO:0016021,GO:0022857,GO:0022883,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046583,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004729 320.0
CMS3_k127_5123135_6 TIGRFAM LAO AO transport system ATPase K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003296 272.0
CMS3_k127_5123135_7 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000001278 201.0
CMS3_k127_5123135_8 Cobalamin B12-binding K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000006611 189.0
CMS3_k127_5123135_9 methyltransferase activity - - - 0.000000000000000000000000000000000000000000003579 177.0
CMS3_k127_5132271_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007192 419.0
CMS3_k127_5132271_1 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007467 281.0
CMS3_k127_5132271_2 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042221,GO:0042594,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0071496,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000001653 231.0
CMS3_k127_5167337_0 Carboxyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 531.0
CMS3_k127_5167337_1 Carboxyl transferase domain - - - 0.00000000001376 66.0
CMS3_k127_5167337_2 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate K07749 - 2.8.3.16 0.0007844 42.0
CMS3_k127_5171744_0 PFAM alpha-2-macroglobulin domain protein K06894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 465.0
CMS3_k127_5171744_1 Drug exporters of the RND superfamily K06994 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 415.0
CMS3_k127_5171744_10 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000001229 112.0
CMS3_k127_5171744_11 AAA ATPase domain - - - 0.0000000000000000000000001407 125.0
CMS3_k127_5171744_12 PFAM Adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000000000000004705 105.0
CMS3_k127_5171744_13 nitrite reductase [NAD(P)H] activity K05710 - - 0.00000000000000002269 91.0
CMS3_k127_5171744_14 Transcriptional regulator K10914 - - 0.0000000000000001038 89.0
CMS3_k127_5171744_15 - - - - 0.0000002199 52.0
CMS3_k127_5171744_16 Peptidase S24-like - - - 0.000000274 56.0
CMS3_k127_5171744_17 Response regulator receiver domain - - - 0.00002435 58.0
CMS3_k127_5171744_2 oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007277 387.0
CMS3_k127_5171744_3 AAA ATPase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002477 393.0
CMS3_k127_5171744_4 Bacterial-like globin K06886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005053 301.0
CMS3_k127_5171744_5 Calcineurin-like phosphoesterase superfamily domain K21814 - 3.1.3.16 0.00000000000000000000000000000000000000000008691 170.0
CMS3_k127_5171744_6 Haemolysin-III related K11068 - - 0.000000000000000000000000000000000000008662 156.0
CMS3_k127_5171744_7 Helix-turn-helix - - - 0.000000000000000000000000000001674 125.0
CMS3_k127_5171744_8 light absorption - - - 0.00000000000000000000000000003375 123.0
CMS3_k127_5171744_9 RNA-binding protein - - - 0.000000000000000000000000005351 113.0
CMS3_k127_5206298_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 GO:0000103,GO:0003674,GO:0003824,GO:0004020,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006790,GO:0006793,GO:0006796,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009336,GO:0009605,GO:0009987,GO:0009991,GO:0010134,GO:0010438,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019419,GO:0031667,GO:0031668,GO:0031669,GO:0032991,GO:0033554,GO:0034599,GO:0040007,GO:0042221,GO:0042594,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0061695,GO:0070887,GO:0071496,GO:0071944,GO:1902494,GO:1902503,GO:1990234 2.7.1.25,2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006951 525.0
CMS3_k127_5206298_1 Phosphoadenosine phosphosulfate reductase family K00957 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 466.0
CMS3_k127_5206298_2 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 378.0
CMS3_k127_5206298_3 Nitrite and sulphite reductase 4Fe-4S domain K00366,K00381 - 1.7.7.1,1.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 356.0
CMS3_k127_5206298_4 Reduction of activated sulfate into sulfite K00390 GO:0003674,GO:0003824,GO:0004604,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016667,GO:0016671,GO:0044424,GO:0044464,GO:0055114 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 345.0
CMS3_k127_5206298_5 AsnC-type helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004364 321.0
CMS3_k127_5206298_6 PFAM Chlorite dismutase - - - 0.0000000000000000000000000000000000000000000000000063 202.0
CMS3_k127_5206298_7 Protein of unknown function (DUF3237) - - - 0.00000000255 61.0
CMS3_k127_523355_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000773 407.0
CMS3_k127_523355_1 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K07025 - - 0.000000000000000000347 95.0
CMS3_k127_523355_2 - - - - 0.00000000000000041 83.0
CMS3_k127_5265843_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 612.0
CMS3_k127_5265843_1 Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004193 291.0
CMS3_k127_5265843_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004627 282.0
CMS3_k127_5265843_3 transport K13891 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000007166 239.0
CMS3_k127_5265843_4 transport K13891 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000009441 235.0
CMS3_k127_5265843_5 Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000005618 222.0
CMS3_k127_5265843_6 Protein of unknown function (DUF1706) - - - 0.00000000004099 74.0
CMS3_k127_5336582_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 477.0
CMS3_k127_5336582_1 GMC oxidoreductase K00108 - 1.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 422.0
CMS3_k127_5336582_10 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000001143 105.0
CMS3_k127_5336582_11 phosphatase activity - - - 0.000000000000000001051 95.0
CMS3_k127_5336582_12 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.000000000000000005064 94.0
CMS3_k127_5336582_13 cytochrome p450 K21200 - - 0.000000309 55.0
CMS3_k127_5336582_14 Divergent 4Fe-4S mono-cluster - - - 0.0007563 48.0
CMS3_k127_5336582_2 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 349.0
CMS3_k127_5336582_3 N-acyl-D-aspartate D-glutamate deacylase K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008045 345.0
CMS3_k127_5336582_4 HRDC domain protein K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002072 285.0
CMS3_k127_5336582_5 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001747 278.0
CMS3_k127_5336582_6 Belongs to the enoyl-CoA hydratase isomerase family K07546 - - 0.0000000000000000000000000000000000000000000000000000000000004488 224.0
CMS3_k127_5336582_7 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000732 196.0
CMS3_k127_5336582_8 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000001465 194.0
CMS3_k127_5336582_9 Iron-containing redox enzyme K06137 - 1.3.3.11 0.0000000000000000000000000000000000000000000004116 175.0
CMS3_k127_5341704_0 Glutamine amidotransferase domain K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006246 437.0
CMS3_k127_5341704_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family K00558 - 2.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004669 423.0
CMS3_k127_5341704_2 trans-aconitate 2-methyltransferase activity K02169,K15256 - 2.1.1.197 0.0000000000000000000000000000000000000000006915 168.0
CMS3_k127_5341704_3 chromosome segregation - - - 0.0001091 49.0
CMS3_k127_5341704_4 Antirestriction protein (ArdA) - - - 0.0001627 48.0
CMS3_k127_5341704_5 Chorismate mutase type II - - - 0.0002036 47.0
CMS3_k127_5375490_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 5.086e-221 705.0
CMS3_k127_5375490_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01684 - 4.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 409.0
CMS3_k127_5375490_10 Protein of unknown function (DUF664) - - - 0.0000000000000000000000000000004955 132.0
CMS3_k127_5375490_11 substrate-binding protein K02035 - - 0.000000000000000000000000008296 127.0
CMS3_k127_5375490_12 Activator of hsp90 atpase 1 family protein - - - 0.00000000000002143 80.0
CMS3_k127_5375490_13 Peptidase propeptide and YPEB domain - - - 0.0000000000001707 76.0
CMS3_k127_5375490_14 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01007,K14415 - 2.7.9.2,6.5.1.3 0.00000000001396 73.0
CMS3_k127_5375490_15 helix-turn-helix domain protein - - - 0.0004809 47.0
CMS3_k127_5375490_2 E1 component K21416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 342.0
CMS3_k127_5375490_3 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003882 323.0
CMS3_k127_5375490_4 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008106 315.0
CMS3_k127_5375490_5 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008905 298.0
CMS3_k127_5375490_6 PFAM short-chain dehydrogenase reductase SDR K00023,K00059 - 1.1.1.100,1.1.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000008656 270.0
CMS3_k127_5375490_7 Copper amine oxidase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001776 249.0
CMS3_k127_5375490_8 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000002128 239.0
CMS3_k127_5375490_9 Enoyl-CoA hydratase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000003259 200.0
CMS3_k127_5422085_0 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 1.943e-218 707.0
CMS3_k127_5422085_1 Belongs to the bacterial solute-binding protein 9 family K02077,K09815,K09818 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004398 367.0
CMS3_k127_5422085_2 ABC-3 protein K09816,K09819 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003957 331.0
CMS3_k127_5422085_3 pfam abc K02074,K09820,K11710,K19973 - 3.6.3.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000003429 269.0
CMS3_k127_5422085_4 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000000000000000000000000000000007623 241.0
CMS3_k127_5422085_5 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000007558 238.0
CMS3_k127_5422085_6 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000002219 217.0
CMS3_k127_5422085_7 Major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000001912 135.0
CMS3_k127_5422085_8 Metal-sensitive transcriptional repressor K21600 - - 0.000000000000000000000003113 111.0
CMS3_k127_5422085_9 Belongs to the Fur family K03711,K09825 - - 0.0000000000000000003871 93.0
CMS3_k127_54940_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1501.0
CMS3_k127_54940_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1320.0
CMS3_k127_54940_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 426.0
CMS3_k127_54940_3 Nucleotidyltransferase domain - - - 0.0000000004379 64.0
CMS3_k127_54940_4 SET domain K07117 - - 0.0000000006109 71.0
CMS3_k127_54940_5 Lysin motif - - - 0.000001139 57.0
CMS3_k127_557116_0 Nitrous oxide reductase K00376 - 1.7.2.4 1.36e-280 877.0
CMS3_k127_557116_1 lipoprotein involved in nitrous oxide reduction - - - 0.00000000000000000000000000000000000000000002433 170.0
CMS3_k127_557116_2 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.000000000000000000000000000000001815 139.0
CMS3_k127_5571267_0 Flavin-binding monooxygenase-like K03379 - 1.14.13.22 1.704e-219 692.0
CMS3_k127_5571267_1 Alkyl sulfatase and related hydrolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005266 481.0
CMS3_k127_5571267_2 Major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000001772 207.0
CMS3_k127_5595886_0 PFAM Rh family protein ammonium transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 557.0
CMS3_k127_5595886_1 Belongs to the HAD-like hydrolase superfamily K02566 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 325.0
CMS3_k127_5595886_2 Nitrogen regulatory protein P-II K04751 - - 0.00000000000000000000000000000000000000000000003296 172.0
CMS3_k127_5595886_3 cellulose binding K12132 - 2.7.11.1 0.00000000000000000004804 98.0
CMS3_k127_5595886_4 arylsulfatase A - - - 0.00000008713 57.0
CMS3_k127_5650511_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K01652,K12673 - 2.2.1.6,2.5.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 593.0
CMS3_k127_5650511_1 PFAM MmgE PrpD family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 432.0
CMS3_k127_565530_0 Phenazine biosynthesis-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000023 274.0
CMS3_k127_565530_1 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000001088 199.0
CMS3_k127_565530_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000000000000000000000000000000005148 160.0
CMS3_k127_565530_3 cell redox homeostasis K02199 - - 0.00000000000000000000000000000000000000001454 166.0
CMS3_k127_565530_4 Beta-lactamase - - - 0.000000000000000000000000000000000000008925 162.0
CMS3_k127_565530_5 Thioredoxin K03671,K05838 - - 0.0000000000007907 70.0
CMS3_k127_565530_6 - - - - 0.000001617 61.0
CMS3_k127_5709453_0 TIGRFAM cation diffusion facilitator family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 349.0
CMS3_k127_5709453_1 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000004391 145.0
CMS3_k127_5709453_2 Multicopper oxidase - - - 0.000000000000004247 82.0
CMS3_k127_5746021_0 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002136 509.0
CMS3_k127_5746021_1 Carboxyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000494 476.0
CMS3_k127_5746021_2 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009454 463.0
CMS3_k127_5746021_3 Alanine-glyoxylate amino-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 334.0
CMS3_k127_5746021_4 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004799 286.0
CMS3_k127_5746021_5 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059,K21883 - 1.1.1.100,1.1.1.401 0.00000000000000000000000000000000000000000000000000000000000000000000007892 249.0
CMS3_k127_5746021_6 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000003729 201.0
CMS3_k127_5746021_7 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000003637 190.0
CMS3_k127_5746021_8 Luciferase-like monooxygenase K00320 - 1.5.98.2 0.0000000000000000000000000000000000000002032 157.0
CMS3_k127_5751395_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11747 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 478.0
CMS3_k127_5751395_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 312.0
CMS3_k127_5751395_2 COG1335 Amidases related to nicotinamidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 294.0
CMS3_k127_5751395_3 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000006095 239.0
CMS3_k127_5751395_4 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000001138 224.0
CMS3_k127_5751395_5 COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.00000000000000000000000000000000000000000000000000000000006768 217.0
CMS3_k127_5751395_6 diguanylate cyclase (GGDEF) domain - - - 0.00000000000000000000000000000000000008734 162.0
CMS3_k127_5751395_7 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000001642 123.0
CMS3_k127_5751395_8 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000004263 100.0
CMS3_k127_5756335_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009176 458.0
CMS3_k127_5756335_1 Belongs to the peptidase M16 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006708 320.0
CMS3_k127_5756335_2 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000006073 128.0
CMS3_k127_5756335_3 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.00000000000205 79.0
CMS3_k127_5756335_4 very-long-chain-acyl-CoA dehydrogenase activity K17910 - 2.7.1.190 0.0000000008423 70.0
CMS3_k127_5761339_0 III protein, CoA-transferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 434.0
CMS3_k127_5761339_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003102 271.0
CMS3_k127_5761339_2 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K03929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001218 269.0
CMS3_k127_5761339_3 Protein of unknown function (DUF3237) - - - 0.0000000000000008637 82.0
CMS3_k127_5804781_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 GO:0003674,GO:0003824,GO:0003861,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009316,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 4.2.1.33,4.2.1.35 1.551e-215 683.0
CMS3_k127_5804781_1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 5.435e-212 674.0
CMS3_k127_5804781_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 2.069e-194 620.0
CMS3_k127_5804781_3 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 447.0
CMS3_k127_5804781_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000001183 214.0
CMS3_k127_5804781_5 Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000001085 196.0
CMS3_k127_5812000_0 Carbon-nitrogen hydrolase K01501 - 3.5.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 312.0
CMS3_k127_5812000_1 DEAD/H associated K03724 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 301.0
CMS3_k127_5812000_2 translation initiation factor activity - - - 0.000001529 50.0
CMS3_k127_5829724_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 494.0
CMS3_k127_5829724_1 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000003941 243.0
CMS3_k127_5829724_2 Short-chain dehydrogenase reductase sdr - - - 0.00000000000000000000000000000000001219 140.0
CMS3_k127_5829724_3 EamA-like transporter family - - - 0.00000000000000000000000441 116.0
CMS3_k127_5829724_4 SNARE associated Golgi protein - - - 0.0002042 51.0
CMS3_k127_5861505_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000001466 193.0
CMS3_k127_5861505_1 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000004345 126.0
CMS3_k127_5861505_2 PHP-associated - - - 0.000000000000000000007894 106.0
CMS3_k127_5861505_3 N-terminal half of MaoC dehydratase - - - 0.000000000000491 81.0
CMS3_k127_5861505_4 DoxX - - - 0.000001243 56.0
CMS3_k127_5861505_5 N-terminal half of MaoC dehydratase - - - 0.00002301 53.0
CMS3_k127_5926451_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 356.0
CMS3_k127_5926451_1 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000008254 226.0
CMS3_k127_5926451_2 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.000000000000000000000000000000000000000000000000000000000001549 220.0
CMS3_k127_5926451_3 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000173 220.0
CMS3_k127_5926451_4 ECF sigma factor K03088 - - 0.0000000000000000000000000004886 120.0
CMS3_k127_5926451_5 Bacterial PH domain - - - 0.0000000000000000008876 97.0
CMS3_k127_5926451_6 F420-dependent enzyme K07005 - - 0.0000000000000002518 84.0
CMS3_k127_5928466_0 PFAM Transketolase, C-terminal domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003004 301.0
CMS3_k127_5928466_1 PFAM Transketolase K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 297.0
CMS3_k127_5928466_2 organic acid phosphorylation K00865 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000001465 270.0
CMS3_k127_5928466_3 Belongs to the sulfur carrier protein TusA family - - - 0.000000000000000000000000000000000000000000000000000000000002702 226.0
CMS3_k127_5928466_4 Activator of Hsp90 ATPase 1 family protein - - - 0.00000000000000000000000000000000000000000000000001874 188.0
CMS3_k127_5928466_5 PFAM conserved - - - 0.00000000000000000000000000009967 128.0
CMS3_k127_5928466_6 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000001668 119.0
CMS3_k127_5928466_7 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.00006319 49.0
CMS3_k127_5930297_0 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008099 279.0
CMS3_k127_5930297_1 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003383 277.0
CMS3_k127_5930297_2 CoA-transferase family III K07543 - 2.8.3.15 0.00000000000000000000000000000000000000000000000000000000000001302 233.0
CMS3_k127_5930297_3 RNA recognition motif - - - 0.00000000000000000000000000009454 117.0
CMS3_k127_5930297_4 lipid-transfer protein - - - 0.000314 48.0
CMS3_k127_5933687_0 Multicopper oxidase K00368,K07233,K22349 - 1.16.3.3,1.7.2.1 0.0 1083.0
CMS3_k127_5933687_1 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 1.499e-316 989.0
CMS3_k127_5933687_10 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000001671 233.0
CMS3_k127_5933687_11 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000008 239.0
CMS3_k127_5933687_12 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000001087 153.0
CMS3_k127_5933687_13 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000002025 119.0
CMS3_k127_5933687_15 Sigma-70 region 2 - - - 0.00000000000000000002344 99.0
CMS3_k127_5933687_16 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.0000000000000001024 92.0
CMS3_k127_5933687_17 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.000000000000003879 82.0
CMS3_k127_5933687_18 Sortase family - - - 0.0000000000002655 79.0
CMS3_k127_5933687_19 Ring hydroxylating alpha subunit (catalytic domain) K16319,K18242 - 1.14.12.1,1.14.13.172 0.00000000002621 68.0
CMS3_k127_5933687_2 Copper binding proteins, plastocyanin/azurin family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 549.0
CMS3_k127_5933687_20 Copper binding proteins, plastocyanin/azurin family - - - 0.00000000561 69.0
CMS3_k127_5933687_21 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000003936 61.0
CMS3_k127_5933687_23 Histidine kinase K02660,K03406,K11525 - - 0.0000000711 58.0
CMS3_k127_5933687_24 - - - - 0.000008793 57.0
CMS3_k127_5933687_25 Ferric reductase like transmembrane component K17247 - - 0.00001609 56.0
CMS3_k127_5933687_26 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0001156 51.0
CMS3_k127_5933687_3 L-carnitine dehydratase bile acid-inducible protein F - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006762 443.0
CMS3_k127_5933687_4 Acyl-CoA dehydrogenase, C-terminal domain K16047 - 1.14.14.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000743 355.0
CMS3_k127_5933687_5 histidine kinase dimerisation and phosphoacceptor region K03406,K07673,K07675 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 333.0
CMS3_k127_5933687_6 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 325.0
CMS3_k127_5933687_7 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007883 287.0
CMS3_k127_5933687_8 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008414 268.0
CMS3_k127_5933687_9 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004545 275.0
CMS3_k127_5937614_0 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 368.0
CMS3_k127_5937614_1 Luciferase-like monooxygenase K00320 - 1.5.98.2 0.00000000000000000000000000000000000000000000000000000000000002801 229.0
CMS3_k127_5937614_2 AAA domain K07028 - - 0.000000000000004898 81.0
CMS3_k127_5937614_3 Methyltransferase type 11 - - - 0.0000009011 59.0
CMS3_k127_5937614_4 peroxiredoxin activity K03564 - 1.11.1.15 0.00003153 47.0
CMS3_k127_5937914_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K15232 - 6.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 513.0
CMS3_k127_5937914_1 HpcH/HpaI aldolase/citrate lyase family K08691 - 4.1.3.24,4.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 504.0
CMS3_k127_5937914_10 - - - - 0.0000000000000000000000000000000000000000000000005345 190.0
CMS3_k127_5937914_11 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000001603 141.0
CMS3_k127_5937914_12 Septum formation - - - 0.0000000000000000000000000001097 121.0
CMS3_k127_5937914_13 Belongs to the Nudix hydrolase family - - - 0.0000000000000000000001778 104.0
CMS3_k127_5937914_14 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000002751 108.0
CMS3_k127_5937914_15 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000002816 102.0
CMS3_k127_5937914_17 Protein of unknown function, DUF488 - - - 0.0000000000003956 78.0
CMS3_k127_5937914_18 NlpC/P60 family - - - 0.00001662 55.0
CMS3_k127_5937914_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000592 474.0
CMS3_k127_5937914_3 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 GO:0000049,GO:0000166,GO:0000287,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004812,GO:0004828,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006434,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0010467,GO:0016020,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016597,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0040007,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046983,GO:0070905,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 444.0
CMS3_k127_5937914_4 Fructose-bisphosphate aldolase class-I K01623 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003679 409.0
CMS3_k127_5937914_5 Succinyl-CoA ligase like flavodoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 381.0
CMS3_k127_5937914_6 acyl-CoA dehydrogenase K14448 - 1.3.8.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 359.0
CMS3_k127_5937914_7 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006093 326.0
CMS3_k127_5937914_8 trans-aconitate 2-methyltransferase activity K02169 - 2.1.1.197 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005408 300.0
CMS3_k127_5937914_9 PFAM peptidase S1 and S6, chymotrypsin Hap K08070 - 1.3.1.74 0.00000000000000000000000000000000000000000000000006125 194.0
CMS3_k127_5952233_0 Integrase catalytic - - - 0.000000006102 62.0
CMS3_k127_5952233_1 Cytochrome c - - - 0.0000004042 59.0
CMS3_k127_5952233_2 serine-type peptidase activity K03641 - - 0.0001582 52.0
CMS3_k127_5952233_3 Short C-terminal domain K08982 - - 0.0001812 47.0
CMS3_k127_5960225_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 7.578e-276 876.0
CMS3_k127_5960225_1 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 385.0
CMS3_k127_5960225_10 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000004066 187.0
CMS3_k127_5960225_11 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000383 151.0
CMS3_k127_5960225_12 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000005259 138.0
CMS3_k127_5960225_13 Competence-damaged protein K03742 - 3.5.1.42 0.0000000000000000000000000000009479 128.0
CMS3_k127_5960225_14 PFAM Uncharacterised P-loop hydrolase UPF0079 K06925 - - 0.00000000000000000000000000004592 123.0
CMS3_k127_5960225_15 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K00969,K09710 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006417,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043023,GO:0044087,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:0090069,GO:0090071,GO:2000112,GO:2000113 2.7.7.18 0.00000000000000008374 94.0
CMS3_k127_5960225_16 PFAM Haloacid dehalogenase domain protein hydrolase - - - 0.0000000000002211 79.0
CMS3_k127_5960225_17 Glycoprotease family K01409,K14742 - 2.3.1.234 0.000000000005878 75.0
CMS3_k127_5960225_18 Acetyltransferase (GNAT) domain - - - 0.0007031 47.0
CMS3_k127_5960225_2 Pfam:Kce - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 341.0
CMS3_k127_5960225_3 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007213 344.0
CMS3_k127_5960225_4 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 329.0
CMS3_k127_5960225_5 UDP-glucose 4-epimerase K01710,K01784 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 4.2.1.46,5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006457 295.0
CMS3_k127_5960225_6 PFAM binding-protein-dependent transport systems inner membrane component K15581 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004681 252.0
CMS3_k127_5960225_7 N-terminal TM domain of oligopeptide transport permease C K15582 - - 0.000000000000000000000000000000000000000000000000000000000000000005285 243.0
CMS3_k127_5960225_8 L-carnitine dehydratase bile acid-inducible protein F - - - 0.00000000000000000000000000000000000000000000000000005117 192.0
CMS3_k127_5960225_9 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000000001487 185.0
CMS3_k127_6007114_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004938 512.0
CMS3_k127_6007114_1 Acyl-CoA dehydrogenase, middle domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 427.0
CMS3_k127_6007114_10 ADP-ribose pyrophosphatase - - - 0.000000000000000000000000002316 127.0
CMS3_k127_6007114_11 major facilitator superfamily MFS_1 - - - 0.00000000000000000000000001698 126.0
CMS3_k127_6007114_12 PFAM Phosphoribosyltransferase K02242 - - 0.00000000000000000000000003568 118.0
CMS3_k127_6007114_13 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000001591 96.0
CMS3_k127_6007114_14 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000007143 85.0
CMS3_k127_6007114_15 SurA N-terminal domain - - - 0.0000004487 62.0
CMS3_k127_6007114_2 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 GO:0003674,GO:0003824,GO:0004795,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008144,GO:0016829,GO:0016835,GO:0016838,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 414.0
CMS3_k127_6007114_3 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005083 347.0
CMS3_k127_6007114_4 PFAM glycosyl transferase group 1 K15521 - 2.4.1.250 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005278 347.0
CMS3_k127_6007114_5 PFAM GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000001298 229.0
CMS3_k127_6007114_6 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000004652 195.0
CMS3_k127_6007114_7 GTP binding - - - 0.000000000000000000000000000000000000000000000000239 193.0
CMS3_k127_6007114_8 Single-strand binding protein family K03111 - - 0.0000000000000000000000000000000000000000000000003803 178.0
CMS3_k127_6007114_9 MoaE protein K03635,K03636,K03637,K03752,K21142 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016782,GO:0016783,GO:0018130,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0030366,GO:0032324,GO:0034641,GO:0042278,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.7.7.77,2.8.1.12,4.6.1.17 0.00000000000000000000000000000000000000002383 164.0
CMS3_k127_6051124_0 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004887 402.0
CMS3_k127_6051124_1 NUDIX domain - - - 0.00000000000000000000000000000000006934 141.0
CMS3_k127_6051124_2 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000001257 97.0
CMS3_k127_6071025_0 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 518.0
CMS3_k127_6071025_1 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) K01661 - 4.1.3.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 419.0
CMS3_k127_6071025_2 Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily K01911 - 6.2.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004691 406.0
CMS3_k127_6071025_3 TIGRFAM isochorismate synthase K02361,K02552 - 5.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001526 293.0
CMS3_k127_6071025_4 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001619 284.0
CMS3_k127_6071025_5 Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) K08680 - 4.2.99.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003161 279.0
CMS3_k127_6071025_6 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) - - - 0.00000000000000000000000000000000000000001074 168.0
CMS3_k127_6071025_7 - - - - 0.00000000000000001663 95.0
CMS3_k127_6071025_8 Matrixin K01402,K07994,K08005 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0012505,GO:0016020,GO:0019898,GO:0031090,GO:0031312,GO:0031984,GO:0042175,GO:0042406,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0098827 3.4.24.34 0.000005843 59.0
CMS3_k127_6118245_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases - - - 0.00000000000000000000000000000000000000000004495 164.0
CMS3_k127_6118245_1 NUDIX domain - - - 0.000000000000000000000000000000004189 134.0
CMS3_k127_6118245_2 Protein of unknown function (DUF402) - - - 0.000000000000000000000000002329 121.0
CMS3_k127_6126424_0 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000001569 226.0
CMS3_k127_6126424_1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007,K21787 - 2.7.9.2 0.000000000000000000000000000000001198 147.0
CMS3_k127_6126424_2 Enolase C-terminal domain-like - - - 0.0000000000000000000000000000000525 140.0
CMS3_k127_6126424_3 YjbR - - - 0.00000000000000000000000000000009081 128.0
CMS3_k127_6126424_4 Luciferase-like monooxygenase K00320 - 1.5.98.2 0.00000000000000000000995 106.0
CMS3_k127_6141581_0 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000005861 168.0
CMS3_k127_6141581_1 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000007039 140.0
CMS3_k127_6145258_0 peroxiredoxin activity K03564 - 1.11.1.15 0.000000000000000000000000000000000000000002079 165.0
CMS3_k127_6145258_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000007698 107.0
CMS3_k127_6145258_2 PFAM globin K06886 - - 0.00000000000000000000003688 107.0
CMS3_k127_6145258_3 - - - - 0.0000000001914 63.0
CMS3_k127_6167511_0 Belongs to the beta-ketoacyl-ACP synthases family K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 436.0
CMS3_k127_6167511_1 PFAM zinc finger, SWIM domain protein - - - 0.0000000000000000004981 90.0
CMS3_k127_6167511_2 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00002691 50.0
CMS3_k127_6204751_0 acetyl-CoA hydrolase K18118,K18288 - 2.8.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000485 426.0
CMS3_k127_6204751_1 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005167 406.0
CMS3_k127_6204751_10 Alpha/beta hydrolase family K07020 - - 0.00000000000000000000000000000000000000000000000000000000000000000002816 241.0
CMS3_k127_6204751_11 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000004195 244.0
CMS3_k127_6204751_12 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000003338 212.0
CMS3_k127_6204751_13 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000005635 167.0
CMS3_k127_6204751_14 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.000000000000000000000000000005443 138.0
CMS3_k127_6204751_15 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000001257 115.0
CMS3_k127_6204751_16 alcohol dehydrogenase (NAD) activity K00001,K00121,K02267,K13980,K18857 GO:0000302,GO:0001101,GO:0001666,GO:0003674,GO:0003824,GO:0004022,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0006970,GO:0006979,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009410,GO:0009413,GO:0009414,GO:0009415,GO:0009628,GO:0009636,GO:0009651,GO:0009719,GO:0009725,GO:0009737,GO:0009743,GO:0009744,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0014070,GO:0014074,GO:0016020,GO:0016491,GO:0016614,GO:0016616,GO:0031000,GO:0032355,GO:0033993,GO:0034285,GO:0036270,GO:0036293,GO:0042221,GO:0042493,GO:0042542,GO:0042802,GO:0042803,GO:0043279,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046686,GO:0046983,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0055114,GO:0065007,GO:0070482,GO:0071944,GO:0080134,GO:0080135,GO:0097305,GO:1900037,GO:1900039,GO:1901698,GO:1901700 1.1.1.1,1.1.1.284 0.0000000878 56.0
CMS3_k127_6204751_2 Belongs to the TPP enzyme family K01577 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006082,GO:0008150,GO:0008152,GO:0008949,GO:0009056,GO:0009268,GO:0009628,GO:0009987,GO:0010447,GO:0016054,GO:0016829,GO:0016830,GO:0016831,GO:0017076,GO:0019752,GO:0019842,GO:0030554,GO:0030976,GO:0032553,GO:0032555,GO:0032559,GO:0033609,GO:0033611,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043531,GO:0043648,GO:0043649,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0046872,GO:0048037,GO:0050662,GO:0050896,GO:0051716,GO:0071214,GO:0071467,GO:0071468,GO:0071704,GO:0097159,GO:0097367,GO:0104004,GO:1901265,GO:1901363,GO:1901575,GO:1901681 4.1.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 404.0
CMS3_k127_6204751_3 PFAM ABC transporter related K02028,K09972 - 3.6.3.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 366.0
CMS3_k127_6204751_4 PFAM Bacterial extracellular solute-binding proteins, family 3 K09969 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 310.0
CMS3_k127_6204751_5 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K09971 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001784 287.0
CMS3_k127_6204751_6 Binding-protein-dependent transport system inner membrane component K09970 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004098 269.0
CMS3_k127_6204751_7 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002911 253.0
CMS3_k127_6204751_8 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004169 250.0
CMS3_k127_6204751_9 Phosphotriesterase K07048 - - 0.000000000000000000000000000000000000000000000000000000000000000000001736 250.0
CMS3_k127_6236473_0 Zinc finger domain - - - 0.00000003004 65.0
CMS3_k127_628225_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 1.689e-279 876.0
CMS3_k127_628225_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 377.0
CMS3_k127_628225_10 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000677 129.0
CMS3_k127_628225_11 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000001057 112.0
CMS3_k127_628225_12 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.0000000000000000000000005625 107.0
CMS3_k127_628225_13 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000008748 98.0
CMS3_k127_628225_14 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000007177 100.0
CMS3_k127_628225_15 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000004712 60.0
CMS3_k127_628225_2 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005837 263.0
CMS3_k127_628225_3 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000002093 235.0
CMS3_k127_628225_4 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000005952 221.0
CMS3_k127_628225_5 Forms part of the polypeptide exit tunnel K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000002379 201.0
CMS3_k127_628225_6 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.000000000000000000000000000000000000000000000000000004858 193.0
CMS3_k127_628225_7 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.0000000000000000000000000000000000000000000000000003062 188.0
CMS3_k127_628225_8 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.0000000000000000000000000000000000000000000000000004358 188.0
CMS3_k127_628225_9 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000001944 157.0
CMS3_k127_6390073_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.0 1414.0
CMS3_k127_6390073_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 331.0
CMS3_k127_6390073_2 Catalyzes the conversion of dihydroorotate to orotate with NAD( ) as electron acceptor K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 327.0
CMS3_k127_6390073_3 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B K02823 - - 0.0000000000000000000000000000000000000000000000009907 186.0
CMS3_k127_6390073_4 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K01091,K06019 - 3.1.3.18,3.6.1.1 0.0000000000000000000001585 109.0
CMS3_k127_6390073_5 NYN domain - - - 0.0000000000000000006753 99.0
CMS3_k127_6390073_6 Acetyltransferase (GNAT) domain K03823 GO:0003674,GO:0003824,GO:0006464,GO:0006473,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 2.3.1.183 0.000122 50.0
CMS3_k127_6390073_7 2'-5' RNA ligase superfamily - - - 0.0002116 52.0
CMS3_k127_6413226_0 PFAM CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008061 404.0
CMS3_k127_6413226_1 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 304.0
CMS3_k127_6413226_2 Belongs to the sulfur carrier protein TusA family - - - 0.00000000000000000000000000000000000000000000000000000000001768 222.0
CMS3_k127_6413226_3 Belongs to the sulfur carrier protein TusA family - - - 0.00000000000000000000000000000000000000000001657 177.0
CMS3_k127_6413226_4 Beta-lactamase superfamily domain - - - 0.000000000000000000000000508 118.0
CMS3_k127_6413226_5 Belongs to the 'phage' integrase family - - - 0.0000000000000000006473 88.0
CMS3_k127_6413226_6 - - - - 0.0000000000001665 77.0
CMS3_k127_6413226_7 Amidohydrolase family - - - 0.0000001487 61.0
CMS3_k127_6413226_8 Putative regulatory protein - - - 0.00009303 49.0
CMS3_k127_6485798_0 MMPL family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 432.0
CMS3_k127_6485798_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000343 260.0
CMS3_k127_6485798_2 Nitronate monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000003748 235.0
CMS3_k127_6485798_3 PFAM Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000006317 166.0
CMS3_k127_6485798_4 'ABC-type branched-chain amino acid transport K01999,K11954 - - 0.00000000000000000000000005904 122.0
CMS3_k127_6485798_5 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000128 96.0
CMS3_k127_6485798_6 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000001633 98.0
CMS3_k127_6485798_7 Protein of unknown function (DUF2892) - - - 0.00000000000005867 73.0
CMS3_k127_6485798_8 Cytochrome C oxidase, cbb3-type, subunit III K19344 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000005924 63.0
CMS3_k127_6485798_9 membrane protein (DUF2078) K08982 - - 0.0003691 48.0
CMS3_k127_6584539_0 Phage capsid family - - - 0.0000000000000000000000000000000000000000000000000000000001703 208.0
CMS3_k127_6584539_1 - - - - 0.00000000000000000000000000000000009561 153.0
CMS3_k127_6584539_2 - - - - 0.000000000000000000000000000000001816 138.0
CMS3_k127_6599359_0 Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 363.0
CMS3_k127_6599359_1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000007846 234.0
CMS3_k127_6599359_2 4Fe-4S dicluster domain K00184 - - 0.0000000000000000000000000000000000000000000000000000000008705 213.0
CMS3_k127_6599359_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000006932 169.0
CMS3_k127_6599359_5 Universal stress protein family - - - 0.00000000000004255 78.0
CMS3_k127_6599359_6 Ethylbenzene dehydrogenase - - - 0.000000000002229 80.0
CMS3_k127_6599359_7 Ethylbenzene dehydrogenase - - - 0.00000000001602 76.0
CMS3_k127_6599359_8 Cytochrome c K00406,K03889 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00006445 51.0
CMS3_k127_6646037_0 Belongs to the amidase family K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000003392 249.0
CMS3_k127_6646037_1 Major facilitator superfamily - - - 0.00000000000000000000000003749 123.0
CMS3_k127_670206_0 Acyl-CoA dehydrogenase, C-terminal domain K22027 - 1.14.13.235 0.00000000000000000000000000000000000000000000000003405 189.0
CMS3_k127_670206_1 Protein of unknown function (DUF1679) - - - 0.000000000000000000000000000000000004958 147.0
CMS3_k127_6715924_0 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 469.0
CMS3_k127_6715924_1 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007028 274.0
CMS3_k127_6715924_2 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 GO:0001130,GO:0003674,GO:0003700,GO:0003824,GO:0003908,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006355,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016740,GO:0016741,GO:0018125,GO:0018193,GO:0018198,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032259,GO:0033554,GO:0034641,GO:0035510,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044728,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0046872,GO:0046914,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070988,GO:0071704,GO:0080090,GO:0080111,GO:0090304,GO:0140110,GO:1901360,GO:1901564,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000001275 228.0
CMS3_k127_6715924_3 Flavin reductase like domain - - - 0.000000000000000000000000000000009162 133.0
CMS3_k127_6715924_4 Metallo-beta-lactamase superfamily - - - 0.00000000000000273 84.0
CMS3_k127_6755708_0 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 293.0
CMS3_k127_6755708_1 ABC transporter K01995,K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000643 286.0
CMS3_k127_6755708_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003671 265.0
CMS3_k127_6755708_3 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000001145 233.0
CMS3_k127_6755708_4 conserved protein, contains double-stranded beta-helix domain - - - 0.00000000001531 74.0
CMS3_k127_6755708_5 Protein of unknown function (DUF664) - - - 0.00003569 49.0
CMS3_k127_675704_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 2.429e-231 731.0
CMS3_k127_675704_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 GO:0008150,GO:0040007 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006793 290.0
CMS3_k127_675704_2 Nucleoside-diphosphate-sugar epimerases - - - 0.000000000000000000000000249 117.0
CMS3_k127_675704_3 Protein of unknown function (DUF3090) - - - 0.00000000000000000000001285 108.0
CMS3_k127_675704_4 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.000000000000000007552 93.0
CMS3_k127_6763935_0 AMP-binding enzyme C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008866 397.0
CMS3_k127_6763935_1 cation diffusion facilitator family transporter K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 319.0
CMS3_k127_6763935_2 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000001151 251.0
CMS3_k127_6763935_3 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000007292 236.0
CMS3_k127_6763935_4 - - - - 0.0000000000000000000000000000000000000000000000000006747 205.0
CMS3_k127_6763935_5 Domain of unknown function (DUF389) - - - 0.0000000000000000000000000000000002616 151.0
CMS3_k127_6763935_6 Cytochrome c - - - 0.00000000000000000000000000003243 122.0
CMS3_k127_6763935_7 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000002131 96.0
CMS3_k127_6763935_8 Alkylmercury lyase K00221 - 4.99.1.2 0.000000000000104 82.0
CMS3_k127_6763935_9 Receptor family ligand binding region K01999 - - 0.000000000005332 73.0
CMS3_k127_6768239_0 DEAD DEAH box K03724 - - 0.0 1024.0
CMS3_k127_6773077_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 513.0
CMS3_k127_6773077_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 453.0
CMS3_k127_6773077_10 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001321 235.0
CMS3_k127_6773077_11 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000359 224.0
CMS3_k127_6773077_12 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.000000000000000000000000000000000000000000000000000000000003864 235.0
CMS3_k127_6773077_13 MaoC like domain - - - 0.0000000000000000000000000000000000000129 149.0
CMS3_k127_6773077_14 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000003217 132.0
CMS3_k127_6773077_15 nUDIX hydrolase K01515,K03574,K19710 - 2.7.7.53,3.6.1.13,3.6.1.55 0.00000000000000000000000000000004544 134.0
CMS3_k127_6773077_16 E-Z type HEAT repeats - - - 0.0000000000000000000000000000001365 137.0
CMS3_k127_6773077_17 NUDIX domain - - - 0.00000000000000000000000000005152 123.0
CMS3_k127_6773077_18 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000001334 129.0
CMS3_k127_6773077_19 PFAM YbbR-like protein - - - 0.0000000000000000000000003001 121.0
CMS3_k127_6773077_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 445.0
CMS3_k127_6773077_20 N-terminal half of MaoC dehydratase - - - 0.000000000000000000000004391 109.0
CMS3_k127_6773077_21 Helix-hairpin-helix motif K02237 - - 0.000000000000000000001975 100.0
CMS3_k127_6773077_22 phosphoglycerate mutase K15634 - 5.4.2.12 0.0000000000000000004482 98.0
CMS3_k127_6773077_23 PFAM Histidine triad (HIT) protein K02503 - - 0.000000000000239 75.0
CMS3_k127_6773077_3 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0006139,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097056,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901576 2.9.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 438.0
CMS3_k127_6773077_4 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 387.0
CMS3_k127_6773077_5 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 308.0
CMS3_k127_6773077_6 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 299.0
CMS3_k127_6773077_7 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000002714 264.0
CMS3_k127_6773077_8 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 GO:0003674,GO:0003824,GO:0004367,GO:0006072,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0019637,GO:0044237,GO:0046167,GO:0052646,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901576 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000009575 261.0
CMS3_k127_6773077_9 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005164 262.0
CMS3_k127_6805900_0 Biotin carboxylase C-terminal domain - - - 0.00000000000000000000000000000000000007519 144.0
CMS3_k127_6805900_1 Dodecin K09165 - - 0.00000000000000000004191 96.0
CMS3_k127_6805900_2 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00000004913 61.0
CMS3_k127_6825901_0 Phage capsid family - - - 0.0000000000000000000000000000000000000000001982 162.0
CMS3_k127_6825901_1 Protein of unknown function (DUF1679) - - - 0.000000000000000000000000000000000000000004303 174.0
CMS3_k127_6825901_2 MerR, DNA binding K13639 - - 0.0000000000000000001789 95.0
CMS3_k127_6825901_3 - - - - 0.0000000002892 69.0
CMS3_k127_6825901_4 - - - - 0.0000003485 62.0
CMS3_k127_6827156_0 High confidence in function and specificity K07484 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009902 298.0
CMS3_k127_6827156_1 IS66 Orf2 like protein K07484 - - 0.0000000000000000000000000002885 119.0
CMS3_k127_6827156_2 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000003512 123.0
CMS3_k127_6843807_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006779 363.0
CMS3_k127_6843807_1 Acyl-CoA dehydrogenase, middle domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002861 355.0
CMS3_k127_6843807_2 molybdenum ion binding K07140 - - 0.00000000000000000000000000000000000000000001058 171.0
CMS3_k127_6863302_0 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000000000000000008333 200.0
CMS3_k127_6875412_0 acyl-CoA transferases carnitine dehydratase K18702 - 2.8.3.19 0.000000000000000000000000000000000001808 154.0
CMS3_k127_6875412_1 acyl-CoA transferases carnitine dehydratase - - - 0.0000000000000000002653 102.0
CMS3_k127_6876282_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005841 513.0
CMS3_k127_6876282_1 helicase superfamily c-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 437.0
CMS3_k127_6876282_2 TIGRFAM NAD(P) transhydrogenase, alpha subunit K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 372.0
CMS3_k127_6876282_3 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.00000000000000000000000003265 117.0
CMS3_k127_6876282_4 L-carnitine dehydratase bile acid-inducible protein F - - - 0.00000000000000000000000006246 117.0
CMS3_k127_6876282_5 - - - - 0.000000000000000007649 89.0
CMS3_k127_6876282_6 Evidence 5 No homology to any previously reported sequences - - - 0.00000002444 65.0
CMS3_k127_6877358_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 GO:0006355,GO:0006464,GO:0006807,GO:0006808,GO:0007154,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0018175,GO:0018177,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070887,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0080090,GO:0090293,GO:1901564,GO:1901698,GO:1901699,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 2.7.7.59 0.00000000000000000000000000000000000000000000000000000000004093 231.0
CMS3_k127_6877358_1 Nitrogen regulatory protein P-II K04751 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0008144,GO:0008150,GO:0016020,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043531,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0051704,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000009552 156.0
CMS3_k127_6877358_2 Ammonium Transporter K03320 - - 0.000000008464 58.0
CMS3_k127_6894142_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 1.718e-235 769.0
CMS3_k127_6894142_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 1.333e-215 699.0
CMS3_k127_6894142_10 PFAM HhH-GPD K07457 - - 0.000000000000000000000000000000000000000000000000002052 197.0
CMS3_k127_6894142_11 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000001869 178.0
CMS3_k127_6894142_12 3-demethylubiquinone-9 3-O-methyltransferase activity K03428 - 2.1.1.11 0.0000000000000000000000000000000000000000000001616 175.0
CMS3_k127_6894142_13 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000002749 158.0
CMS3_k127_6894142_14 PAP2 superfamily - - - 0.0000000000000000000000000000000002368 151.0
CMS3_k127_6894142_15 Methylmuconolactone methyl-isomerase - - - 0.0000000000000000000000000000001259 129.0
CMS3_k127_6894142_16 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.00000000000000000000000000001031 120.0
CMS3_k127_6894142_17 methyltransferase - - - 0.000000000000000000001289 94.0
CMS3_k127_6894142_18 Uncharacterised protein family UPF0066 - - - 0.00000000000000000005069 97.0
CMS3_k127_6894142_19 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.000000000001579 78.0
CMS3_k127_6894142_2 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255,K01259 GO:0001073,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006351,GO:0006355,GO:0006508,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009056,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016787,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019904,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042150,GO:0043170,GO:0043171,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043244,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0097718,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1903506,GO:2000112,GO:2001141 3.4.11.1,3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 415.0
CMS3_k127_6894142_20 Glyoxalase-like domain - - - 0.00000002049 64.0
CMS3_k127_6894142_21 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) - - - 0.00002943 54.0
CMS3_k127_6894142_3 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 397.0
CMS3_k127_6894142_4 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 347.0
CMS3_k127_6894142_5 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 342.0
CMS3_k127_6894142_6 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 338.0
CMS3_k127_6894142_7 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001142 297.0
CMS3_k127_6894142_8 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000001094 273.0
CMS3_k127_6894142_9 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000005369 215.0
CMS3_k127_6909506_0 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007668 310.0
CMS3_k127_6909506_1 acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01615 - 4.1.1.70 0.0000000000000000000000000000000000000000000000000000000003978 212.0
CMS3_k127_6912646_0 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 313.0
CMS3_k127_6912646_1 ribose 5-phosphate isomerase B K01808 - 5.3.1.6 0.000000000000000002783 86.0
CMS3_k127_6922455_0 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000001177 171.0
CMS3_k127_6922455_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000003296 171.0
CMS3_k127_6922455_2 COG0477 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000005088 159.0
CMS3_k127_6922455_3 Sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.000000000004554 67.0
CMS3_k127_6923218_1 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.00004161 55.0
CMS3_k127_6929458_0 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K00760,K04075 - 2.4.2.8,6.3.4.19 0.00000000000000000000000000000000000000751 158.0
CMS3_k127_6929458_1 - - - - 0.00000000000000000000000000000002115 128.0
CMS3_k127_6929458_2 - - - - 0.00000000000000000000000000002927 119.0
CMS3_k127_6929458_3 phosphoglycerate mutase family K22305 - 3.1.3.3 0.0000000000000000000000000001966 127.0
CMS3_k127_6929458_4 - - - - 0.0000000000000000000008442 98.0
CMS3_k127_6929458_5 - - - - 0.00000000000000000001591 96.0
CMS3_k127_6929458_6 Uncharacterized protein conserved in bacteria (DUF2344) - - - 0.00000000000000001401 89.0
CMS3_k127_6929458_7 - - - - 0.0000000004321 62.0
CMS3_k127_6929458_8 - - - - 0.0000001375 53.0
CMS3_k127_6929458_9 cell cycle K05589,K13052 - - 0.000009288 53.0
CMS3_k127_6935204_0 FAD linked oxidase domain protein - - - 1.344e-246 786.0
CMS3_k127_6942644_0 Flavoprotein involved in K transport - - - 6.54e-271 842.0
CMS3_k127_6942644_1 Adenylyl cyclase class-3 4 guanylyl cyclase - - - 3.066e-216 716.0
CMS3_k127_6942644_2 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 542.0
CMS3_k127_6942644_3 Histidine kinase-, DNA gyrase B-, and HSP90-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 306.0
CMS3_k127_6942644_4 IMP dehydrogenase activity K02902 - - 0.0000000001068 68.0
CMS3_k127_6942644_5 Rhodanese Homology Domain - - - 0.00006212 48.0
CMS3_k127_6966653_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 317.0
CMS3_k127_6966653_1 Glutamate synthase K00284 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.7.1 0.000008385 50.0
CMS3_k127_6981489_0 Biotin carboxylase C-terminal domain - - - 0.0 1332.0
CMS3_k127_6981489_1 LUD domain K00782,K18929 - - 1.379e-196 643.0
CMS3_k127_6981489_10 response regulator - - - 0.00000000000000000007331 103.0
CMS3_k127_6981489_11 LUD domain K00782 - - 0.000000000001531 79.0
CMS3_k127_6981489_12 Domain of unknown function (DUF4157) - - - 0.00000009913 58.0
CMS3_k127_6981489_2 PFAM ABC transporter transmembrane region K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 516.0
CMS3_k127_6981489_3 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 362.0
CMS3_k127_6981489_4 alpha/beta hydrolase fold K01066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003447 299.0
CMS3_k127_6981489_5 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005993 287.0
CMS3_k127_6981489_6 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000002075 223.0
CMS3_k127_6981489_7 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000003439 208.0
CMS3_k127_6981489_8 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000001209 202.0
CMS3_k127_6981489_9 Ecdysteroid kinase - - - 0.000000000000000000000000000000000002387 152.0
CMS3_k127_6991065_0 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004643 303.0
CMS3_k127_6991065_1 Penicillin amidase K01434,K07116 - 3.5.1.11,3.5.1.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006729 295.0
CMS3_k127_6995853_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 580.0
CMS3_k127_6995853_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 592.0
CMS3_k127_6995853_10 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000002058 266.0
CMS3_k127_6995853_11 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000006044 222.0
CMS3_k127_6995853_12 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0030312,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000004201 226.0
CMS3_k127_6995853_13 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000008318 196.0
CMS3_k127_6995853_14 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000003374 187.0
CMS3_k127_6995853_15 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.000000000000000000000000000000000000000000003877 168.0
CMS3_k127_6995853_16 Kdo2-lipid A biosynthetic process K02517,K22311 - 2.3.1.241,2.3.1.265 0.000000000000000000000000000000000000000005467 165.0
CMS3_k127_6995853_17 PFAM phosphatidate cytidylyltransferase K00981 - 2.7.7.41 0.0000000000000000000000000000000003435 142.0
CMS3_k127_6995853_18 DNA-binding transcription factor activity K21703 - - 0.000000000000000000000000000000006603 139.0
CMS3_k127_6995853_19 myo-inosose-2 dehydratase activity K01805 - 5.3.1.5 0.00000000000000000000000004006 122.0
CMS3_k127_6995853_2 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004658 583.0
CMS3_k127_6995853_20 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0000000000000000000002672 100.0
CMS3_k127_6995853_21 - - - - 0.0000000000005073 79.0
CMS3_k127_6995853_22 Chloramphenicol phosphotransferase-like protein - - - 0.000000001838 70.0
CMS3_k127_6995853_23 regulatory protein, FmdB family - - - 0.000000002408 64.0
CMS3_k127_6995853_24 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000006189 64.0
CMS3_k127_6995853_25 Protein of unknown function (DUF448) K07742 - - 0.0000002133 62.0
CMS3_k127_6995853_3 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 503.0
CMS3_k127_6995853_4 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 390.0
CMS3_k127_6995853_5 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 357.0
CMS3_k127_6995853_6 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007265 333.0
CMS3_k127_6995853_7 Domain present in PSD-95, Dlg, and ZO-1/2. K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 304.0
CMS3_k127_6995853_8 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000013 274.0
CMS3_k127_6995853_9 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000001493 265.0
CMS3_k127_7020376_0 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 544.0
CMS3_k127_7020376_1 Drug exporters of the RND superfamily K06994,K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002943 546.0
CMS3_k127_7020376_10 alcohol dehydrogenase K00001,K13953 - 1.1.1.1 0.00000000009672 64.0
CMS3_k127_7020376_11 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.00000008617 57.0
CMS3_k127_7020376_2 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006214 301.0
CMS3_k127_7020376_3 Chloramphenicol phosphotransferase-like protein K18554 - - 0.000000000000000000000000000000000000000000000000000000000000000000000449 244.0
CMS3_k127_7020376_4 Belongs to the glycosyl hydrolase 3 family - - - 0.000000000000000000000000000000000000000000000000000000001801 214.0
CMS3_k127_7020376_5 PFAM NAD dependent epimerase dehydratase family K01710,K01784 - 4.2.1.46,5.1.3.2 0.0000000000000000000000000000000000000001088 168.0
CMS3_k127_7020376_6 AAA domain - - - 0.00000000000000000000000004228 118.0
CMS3_k127_7020376_7 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K08372 - - 0.0000000000000000002246 102.0
CMS3_k127_7020376_8 Peptidase C26 K01658,K07010 - 4.1.3.27 0.0000000000000000004486 91.0
CMS3_k127_7020376_9 Acetyltransferase (GNAT) family K22477 - 2.3.1.1 0.00000000000139 76.0
CMS3_k127_7039138_0 Bacterial extracellular solute-binding protein K02064 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004587 289.0
CMS3_k127_7039138_1 thiamine transport K02063 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006855,GO:0008150,GO:0015234,GO:0015238,GO:0015893,GO:0016020,GO:0022857,GO:0035461,GO:0042221,GO:0042493,GO:0044464,GO:0045117,GO:0050896,GO:0051179,GO:0051180,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071934,GO:0071944,GO:0072348,GO:0072531,GO:0090482,GO:1901474,GO:1901682 - 0.0000000000000000000000000000000000000000000000000000000000000000000001735 257.0
CMS3_k127_7039686_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 3.263e-298 929.0
CMS3_k127_7039686_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 2.094e-241 778.0
CMS3_k127_7039686_10 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005564 308.0
CMS3_k127_7039686_11 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 309.0
CMS3_k127_7039686_12 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005383 301.0
CMS3_k127_7039686_13 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006168 288.0
CMS3_k127_7039686_14 regulation of RNA biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007398 260.0
CMS3_k127_7039686_15 short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000147 267.0
CMS3_k127_7039686_16 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000001583 262.0
CMS3_k127_7039686_17 Belongs to the ABC transporter superfamily K02017 - 3.6.3.29 0.0000000000000000000000000000000000000000000000000000000000000000002641 246.0
CMS3_k127_7039686_18 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000001478 243.0
CMS3_k127_7039686_19 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000114 219.0
CMS3_k127_7039686_2 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 602.0
CMS3_k127_7039686_20 Binding-protein-dependent transport system inner membrane component K02018,K02046,K15496 - - 0.00000000000000000000000000000000000000000000000000000000000899 218.0
CMS3_k127_7039686_21 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000007492 215.0
CMS3_k127_7039686_22 PAC2 family - - - 0.000000000000000000000000000000000000000000000000000001806 202.0
CMS3_k127_7039686_23 Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX K17759 - 5.1.99.6 0.000000000000000000000000000000000000000000000000000003359 199.0
CMS3_k127_7039686_24 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0000000000000000000000000000000000000000000006612 175.0
CMS3_k127_7039686_25 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000493 165.0
CMS3_k127_7039686_26 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000000000003184 140.0
CMS3_k127_7039686_27 ABC transporter, periplasmic molybdate-binding protein K02020 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0008150,GO:0030288,GO:0030313,GO:0030973,GO:0031975,GO:0040007,GO:0042597,GO:0043167,GO:0043168,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0051704 - 0.000000000000000000000000000001222 131.0
CMS3_k127_7039686_28 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000001687 132.0
CMS3_k127_7039686_29 FtsX-like permease family - - - 0.00000000000000000000000000000199 141.0
CMS3_k127_7039686_3 Ftsk_gamma K03466 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 531.0
CMS3_k127_7039686_30 membrane K08974 - - 0.000000000000000000000000000005742 128.0
CMS3_k127_7039686_31 PFAM GCN5-related N-acetyltransferase K03790 - 2.3.1.128 0.0000000000000000000000000001634 123.0
CMS3_k127_7039686_32 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000000000000000000001689 122.0
CMS3_k127_7039686_33 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000002108 130.0
CMS3_k127_7039686_34 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0000000000000000000000008896 114.0
CMS3_k127_7039686_35 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000004493 104.0
CMS3_k127_7039686_36 Recombinase zinc beta ribbon domain - - - 0.00000000000000000000008537 113.0
CMS3_k127_7039686_37 X-Pro dipeptidyl-peptidase (S15 family) K06889 - - 0.0000000000000000004909 98.0
CMS3_k127_7039686_38 PFAM cytochrome c biogenesis protein, transmembrane region K06196 - - 0.00000000000000005834 91.0
CMS3_k127_7039686_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 407.0
CMS3_k127_7039686_40 Pyridoxamine 5'-phosphate oxidase - - - 0.00000000000003082 83.0
CMS3_k127_7039686_42 Ribosomal L32p protein family K02911 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000004933 70.0
CMS3_k127_7039686_44 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03116,K03117 - - 0.000002778 56.0
CMS3_k127_7039686_5 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003104 386.0
CMS3_k127_7039686_6 aromatic amino acid beta-eliminating lyase threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 357.0
CMS3_k127_7039686_7 Short-chain dehydrogenase reductase sdr K00065 - 1.1.1.127 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 329.0
CMS3_k127_7039686_8 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008889 324.0
CMS3_k127_7039686_9 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004032 319.0
CMS3_k127_7042539_0 PFAM Rh family protein ammonium transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005843 441.0
CMS3_k127_7042539_1 Nitrogen regulatory protein P-II - - - 0.000000000000000000000000000000000252 142.0
CMS3_k127_7042539_2 Transcriptional regulatory protein, C terminal - - - 0.0000000000004753 78.0
CMS3_k127_7079427_0 Biotin-requiring enzyme - - - 0.0000000003303 64.0
CMS3_k127_7086889_0 Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA K01638 GO:0000287,GO:0003674,GO:0003824,GO:0004474,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009436,GO:0009987,GO:0016054,GO:0016740,GO:0016746,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0046395,GO:0046487,GO:0046872,GO:0046912,GO:0071704,GO:0072329,GO:1901575 2.3.3.9 2.661e-306 971.0
CMS3_k127_7086889_1 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 448.0
CMS3_k127_7086889_2 Protein of unknown function (DUF1295) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009169 376.0
CMS3_k127_7086889_3 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 368.0
CMS3_k127_7086889_4 NADP oxidoreductase coenzyme F420-dependent K00020,K00042 - 1.1.1.31,1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 396.0
CMS3_k127_7086889_5 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005813 377.0
CMS3_k127_7086889_6 PFAM cytochrome P450 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005088 325.0
CMS3_k127_7086889_7 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001301 280.0
CMS3_k127_7097588_0 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 0.0 1140.0
CMS3_k127_7097588_1 Zinc-binding dehydrogenase K00121 - 1.1.1.1,1.1.1.284 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 361.0
CMS3_k127_7097588_2 -acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001976 250.0
CMS3_k127_7097588_3 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346,K14161 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000003539 254.0
CMS3_k127_7097588_4 - - - - 0.000001294 61.0
CMS3_k127_7128963_0 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 0.00000000000000000000000000000000000000000005619 178.0
CMS3_k127_7128963_1 KR domain - - - 0.0000000000000000000000000000000003983 142.0
CMS3_k127_7171278_0 transposase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006446 461.0
CMS3_k127_7171278_1 GPW Gp25 family protein K06903 - - 0.000000000000000000000000000000000000000002472 159.0
CMS3_k127_7171278_2 DNA integration - - - 0.00000000000000000000000000000000002471 145.0
CMS3_k127_7171278_3 - - - - 0.0000000000000000000001198 99.0
CMS3_k127_7171278_4 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH - - - 0.000005606 59.0
CMS3_k127_7171278_5 - - - - 0.00001217 55.0
CMS3_k127_7173829_0 Berberine and berberine like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000237 490.0
CMS3_k127_7173829_1 response regulator - - - 0.00000000000000000000000000000000000000000000006366 181.0
CMS3_k127_7173829_2 histidine kinase, dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000001717 142.0
CMS3_k127_7173829_3 alpha/beta hydrolase fold - - - 0.0000000000000000000000000001725 124.0
CMS3_k127_7173829_4 regulatory protein, arsR - - - 0.00002747 55.0
CMS3_k127_7173829_5 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.8.5 0.00006142 47.0
CMS3_k127_7220672_0 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000003175 237.0
CMS3_k127_7220672_1 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000547 128.0
CMS3_k127_7220672_2 Cupin 2, conserved barrel domain protein K19547 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016853,GO:0016860,GO:0016863,GO:0016999,GO:0017000,GO:0017144,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0046872,GO:0046914,GO:0050897 5.3.3.19 0.0000000000000000005084 91.0
CMS3_k127_7292698_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 393.0
CMS3_k127_7292698_1 Acyl-CoA dehydrogenase, middle domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005443 301.0
CMS3_k127_7419409_0 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000896 246.0
CMS3_k127_7419409_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000001139 122.0
CMS3_k127_7421746_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 417.0
CMS3_k127_7421746_1 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.0000000000001605 80.0
CMS3_k127_7574704_0 BAAT / Acyl-CoA thioester hydrolase C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007071 298.0
CMS3_k127_7574704_1 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000007651 197.0
CMS3_k127_7574704_2 - - - - 0.0000000000000000007956 93.0
CMS3_k127_7574704_3 dehydratase - - - 0.0000000000000009872 88.0
CMS3_k127_761662_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003207 469.0
CMS3_k127_761662_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 351.0
CMS3_k127_761662_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000002049 273.0
CMS3_k127_761662_3 Aminoglycoside-2''-adenylyltransferase - - - 0.00000000000000000000001181 111.0
CMS3_k127_761662_4 Excises ethenocytosine and uracil, which can arise by alkylation or deamination of cytosine, respectively, from the corresponding mispairs with guanine in ds-DNA. It is capable of hydrolyzing the carbon-nitrogen bond between the sugar-phosphate backbone of the DNA and the mispaired base. The complementary strand guanine functions in substrate recognition. Required for DNA damage lesion repair in stationary-phase cells K03649 - 3.2.2.28 0.0000000000000000001452 100.0
CMS3_k127_7626133_0 Bacterial dnaA protein K02315 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 316.0
CMS3_k127_768754_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 557.0
CMS3_k127_768754_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000006149 164.0
CMS3_k127_768754_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000003748 76.0
CMS3_k127_793942_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1140.0
CMS3_k127_793942_1 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 339.0
CMS3_k127_793942_2 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 333.0
CMS3_k127_793942_3 Methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000001306 224.0
CMS3_k127_793942_4 - - - - 0.00000003274 62.0
CMS3_k127_82983_0 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 408.0
CMS3_k127_82983_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016491,GO:0016651,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000002739 237.0
CMS3_k127_82983_2 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.000000000000000004103 98.0
CMS3_k127_82983_3 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.00000000704 64.0
CMS3_k127_8344_0 Domain present in carbohydrate binding proteins and sugar hydrolses K07218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006121 541.0
CMS3_k127_8344_1 - K19341 - - 0.0000000000000000000000000000000000000000000000000008993 195.0
CMS3_k127_8344_2 lipoprotein involved in nitrous oxide reduction K19342 - - 0.00002471 48.0
CMS3_k127_868530_0 TIGRFAM geranylgeranyl reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000009076 228.0
CMS3_k127_868530_1 Protein of unknown function (DUF3179) - - - 0.0000000000000000000000000000000000000000000000000037 203.0
CMS3_k127_868530_2 GYD domain - - - 0.000000000000000000000000001809 114.0
CMS3_k127_93102_0 Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004039 510.0
CMS3_k127_93102_1 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002861 441.0
CMS3_k127_93102_10 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000008424 243.0
CMS3_k127_93102_11 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000001032 243.0
CMS3_k127_93102_12 Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000002046 237.0
CMS3_k127_93102_13 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000003224 197.0
CMS3_k127_93102_14 Amidohydrolase family - - - 0.0000000000000000000000000000000000000006362 166.0
CMS3_k127_93102_15 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.0000000000000000000000000000000000000009831 160.0
CMS3_k127_93102_16 Sirohaem biosynthesis protein central K02304 - 1.3.1.76,4.99.1.4 0.000000000000000000000000000000000000002713 155.0
CMS3_k127_93102_17 Domain of unknown function (DUF4202) - - - 0.0000000000000000000000000000000000001963 159.0
CMS3_k127_93102_18 purine nucleotide biosynthetic process K02529,K03604 - - 0.000000000000000000000000000008884 132.0
CMS3_k127_93102_19 Protein of unknown function (DUF455) K11529 - 2.7.1.165 0.00000000000000000002663 103.0
CMS3_k127_93102_2 PFAM peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 451.0
CMS3_k127_93102_20 ABC transporter substrate-binding protein K02035,K15580 - - 0.00000000001117 78.0
CMS3_k127_93102_21 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000006362 76.0
CMS3_k127_93102_22 Alpha/beta hydrolase family - - - 0.00000001363 59.0
CMS3_k127_93102_23 catalyzes the conversion of K17723 GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0006139,GO:0006206,GO:0006208,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016491,GO:0016651,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0048037,GO:0051536,GO:0051540,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 1.3.1.1 0.000001008 61.0
CMS3_k127_93102_24 Protein of unknown function (DUF455) - - - 0.0008765 51.0
CMS3_k127_93102_3 Tetrapyrrole (Corrin/Porphyrin) Methylases K01719,K01749,K02303,K13542,K13543 GO:0003674,GO:0003824,GO:0004851,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008757,GO:0009058,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019354,GO:0019438,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.107,2.5.1.61,4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008058 440.0
CMS3_k127_93102_4 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 383.0
CMS3_k127_93102_5 Nitrite and sulphite reductase 4Fe-4S domain K00366,K00381 - 1.7.7.1,1.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 305.0
CMS3_k127_93102_6 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000003863 254.0
CMS3_k127_93102_7 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000002844 246.0
CMS3_k127_93102_8 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000002876 254.0
CMS3_k127_93102_9 Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000238 243.0
CMS3_k127_952713_0 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000003234 219.0
CMS3_k127_952713_1 Carboxylesterase family - - - 0.00000000000000000000000000000000000000000000000000007661 202.0
CMS3_k127_952713_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000008529 92.0
CMS3_k127_955393_0 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004127 464.0
CMS3_k127_955393_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 452.0
CMS3_k127_955393_2 Integrase core domain - - - 0.000000000000000000000004119 114.0
CMS3_k127_955393_3 CGNR zinc finger - - - 0.000000000000000004559 90.0
CMS3_k127_955393_4 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.000000000229 68.0
CMS3_k127_959308_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 1.362e-198 635.0
CMS3_k127_959308_1 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009415 615.0
CMS3_k127_959308_10 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 352.0
CMS3_k127_959308_11 Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009793 332.0
CMS3_k127_959308_12 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001119 291.0
CMS3_k127_959308_13 PFAM cytochrome c oxidase, subunit III K02276,K02299 - 1.9.3.1 0.000000000000000000000000000000000000000002097 165.0
CMS3_k127_959308_14 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.000000000000000000000000000000000000001249 164.0
CMS3_k127_959308_15 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.0000000000000000000000000000000000001097 153.0
CMS3_k127_959308_16 transferase activity, transferring acyl groups K03824 - - 0.0000000000000000000000000000000001935 142.0
CMS3_k127_959308_17 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000009908 141.0
CMS3_k127_959308_18 helix_turn_helix, Lux Regulon - - - 0.00000000009089 74.0
CMS3_k127_959308_19 Bacterial regulatory proteins, tetR family - - - 0.000000002646 67.0
CMS3_k127_959308_2 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 555.0
CMS3_k127_959308_20 COG2010 Cytochrome c, mono- and diheme variants K12263,K13300 - - 0.000000003693 64.0
CMS3_k127_959308_21 PFAM blue (type 1) copper domain protein - - - 0.00000001739 64.0
CMS3_k127_959308_22 - - - - 0.00002259 49.0
CMS3_k127_959308_3 PFAM Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 525.0
CMS3_k127_959308_4 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004123 463.0
CMS3_k127_959308_5 Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003546 437.0
CMS3_k127_959308_6 Aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004963 415.0
CMS3_k127_959308_7 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000783 372.0
CMS3_k127_959308_8 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 358.0
CMS3_k127_959308_9 CoA-transferase family III K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008439 356.0
CMS3_k127_968524_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 417.0
CMS3_k127_968524_1 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000004272 186.0
CMS3_k127_968524_2 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000003688 188.0
CMS3_k127_968524_3 Activator of Hsp90 ATPase - - - 0.000000000000000000000000000000000002585 142.0
CMS3_k127_971708_0 Biotin carboxylase - - - 0.0 1180.0
CMS3_k127_971708_1 Transport of potassium into the cell K03549 - - 2.325e-195 649.0
CMS3_k127_971708_2 domain, Protein K03980,K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000005028 200.0
CMS3_k127_971708_3 Protein of unknown function (DUF1232) - - - 0.00000000000000000000000000004708 123.0
CMS3_k127_980284_0 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006715 312.0
CMS3_k127_980284_1 Domain of unknown function (DUF4389) - - - 0.000000000000000000000000000000000000000000000000000000001885 209.0
CMS3_k127_980284_2 Transcriptional regulatory protein, C terminal K07658 - - 0.0000000000000000000000000000000000000002408 158.0
CMS3_k127_980284_3 ABC transporter K01990,K09695 - - 0.000000000000000000000000000000000456 145.0
CMS3_k127_980800_0 helix_turn_helix, Lux Regulon K03556 - - 7.586e-205 668.0
CMS3_k127_980800_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 509.0
CMS3_k127_980800_2 exporters of the RND superfamily - - - 0.000000000000000000000000009423 128.0
CMS3_k127_980800_3 - - - - 0.0000000000001908 75.0
CMS3_k127_980800_4 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0001344 46.0
CMS3_k127_994757_0 tRNA (Guanine-1)-methyltransferase K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 299.0
CMS3_k127_994757_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004223 272.0
CMS3_k127_994757_2 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000002315 137.0
CMS3_k127_994757_3 molybdenum cofactor K03638,K03831 - 2.7.7.75 0.000000001582 59.0