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Overview

ID MAG00577
Name CMS3_bin.89
Sample SMP0012
Taxonomy
Kingdom Archaea
Phylum Thermoproteota
Class Nitrososphaeria
Order Nitrososphaerales
Family Nitrosopumilaceae
Genus Nitrosomaritimum
Species
Assembly information
Completeness (%) 54.58
Contamination (%) 0.71
GC content (%) 33.0
N50 (bp) 7,620
Genome size (bp) 882,623

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1094

Gene name Description KEGG GOs EC E-value Score Sequence
CMS3_k127_1014286_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01895 - 6.2.1.1 0.0 1040.0
CMS3_k127_1014286_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007255 376.0
CMS3_k127_1014286_2 transcriptional - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 332.0
CMS3_k127_1014286_3 PAS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001069 237.0
CMS3_k127_1014286_4 - - - - 0.00000000000000000000007556 102.0
CMS3_k127_1019060_0 SMC proteins Flexible Hinge Domain K03529 - - 0.0 1618.0
CMS3_k127_1019060_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 2.889e-265 821.0
CMS3_k127_1019060_10 Histidine-specific methyltransferase, SAM-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006089 506.0
CMS3_k127_1019060_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009409 484.0
CMS3_k127_1019060_12 Periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 415.0
CMS3_k127_1019060_13 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 401.0
CMS3_k127_1019060_14 phosphoserine phosphatase K01079 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009561 376.0
CMS3_k127_1019060_15 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K13566 - 3.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 342.0
CMS3_k127_1019060_16 F420-0:Gamma-glutamyl ligase K12234 - 6.3.2.31,6.3.2.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 331.0
CMS3_k127_1019060_17 DSBA oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 325.0
CMS3_k127_1019060_18 PAC2 family K06869 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004206 317.0
CMS3_k127_1019060_19 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000001009 234.0
CMS3_k127_1019060_2 DinB superfamily - - - 2.075e-245 762.0
CMS3_k127_1019060_20 - - - - 0.0000000000000000000000000000000000000000000000000000000001278 205.0
CMS3_k127_1019060_21 - - - - 0.000000000000000000000000000000000000000000000000000000005886 202.0
CMS3_k127_1019060_22 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000004303 178.0
CMS3_k127_1019060_23 Alba K03622 - - 0.0000000000000000000000000000000000000000000000007712 179.0
CMS3_k127_1019060_24 zinc finger - - - 0.0000000000000000000000000000000000000000000002079 169.0
CMS3_k127_1019060_25 - - - - 0.00000000000000000000000000000000000000000199 159.0
CMS3_k127_1019060_26 - - - - 0.00000000000000000000000000000000000000004231 153.0
CMS3_k127_1019060_27 redox protein, regulator of disulfide bond formation - - - 0.0000000000000000000000000000000000000003435 149.0
CMS3_k127_1019060_28 - - - - 0.00000000000000000000000000000000004595 139.0
CMS3_k127_1019060_29 - - - - 0.000000000000000000000003385 104.0
CMS3_k127_1019060_3 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 3.255e-217 677.0
CMS3_k127_1019060_31 cheY-homologous receiver domain K03413 - - 0.000000000000002993 81.0
CMS3_k127_1019060_32 - - - - 0.00000000000001334 76.0
CMS3_k127_1019060_33 - - - - 0.0000000002756 63.0
CMS3_k127_1019060_4 Archaeal Nre, N-terminal - - - 1.537e-197 620.0
CMS3_k127_1019060_5 Cysteine synthase K12339 - 2.5.1.47 1.523e-195 612.0
CMS3_k127_1019060_6 Deoxyhypusine synthase K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008542 563.0
CMS3_k127_1019060_7 Radical SAM domain protein K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004539 546.0
CMS3_k127_1019060_8 Oligopeptide/dipeptide transporter, C-terminal region K02032 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007508 516.0
CMS3_k127_1019060_9 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis K04479 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 511.0
CMS3_k127_105685_0 - - - - 0.0 1078.0
CMS3_k127_1059299_0 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 389.0
CMS3_k127_1059299_1 Adenylate cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000452 245.0
CMS3_k127_1059299_2 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000008593 180.0
CMS3_k127_1140211_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 489.0
CMS3_k127_1140211_1 GHMP kinases N terminal domain K00891 - 2.7.1.71 0.000000000000000000000000000000000000000000000000000000001263 206.0
CMS3_k127_1208293_0 UDP binding domain K02474 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 335.0
CMS3_k127_1208293_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 311.0
CMS3_k127_1208293_2 NAD(P)H-binding K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 293.0
CMS3_k127_1208293_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004183 246.0
CMS3_k127_1208293_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000001623 216.0
CMS3_k127_1208293_5 - - - - 0.0000000000000000000000000000000000000000000000000000001744 196.0
CMS3_k127_1208293_6 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000004181 169.0
CMS3_k127_1208293_7 Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000003887 106.0
CMS3_k127_1208905_0 Protein of unknown function, DUF255 K06888 - - 0.0 1115.0
CMS3_k127_1208905_1 Peptidase family M3 K08602 - - 3.699e-305 945.0
CMS3_k127_1208905_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 343.0
CMS3_k127_1208905_11 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 338.0
CMS3_k127_1208905_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 307.0
CMS3_k127_1208905_13 CBS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001427 265.0
CMS3_k127_1208905_14 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000668 253.0
CMS3_k127_1208905_15 Subtilase family K14645 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000102 264.0
CMS3_k127_1208905_16 Peptidyl-tRNA hydrolase PTH2 K04794 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000004466 234.0
CMS3_k127_1208905_17 - - - - 0.000000000000000000000000000000000000000000000000000000000000004329 222.0
CMS3_k127_1208905_18 - - - - 0.000000000000000000000000000000000000000000000000000001357 192.0
CMS3_k127_1208905_19 - - - - 0.0000000000000000000000000000000000000000000000000000901 190.0
CMS3_k127_1208905_2 DEAD DEAH box helicase K05592 - 3.6.4.13 2.707e-239 744.0
CMS3_k127_1208905_20 - - - - 0.000000000000000000000000000000000000000000000000003028 183.0
CMS3_k127_1208905_21 - - - - 0.00000000000000000000000000000000000000000009892 164.0
CMS3_k127_1208905_22 - - - - 0.000000000000000000000000000000000000000001769 157.0
CMS3_k127_1208905_23 Archaeal Type IV pilin, N-terminal K01698 - 4.2.1.24 0.00000000000000000000000000000000000000008737 159.0
CMS3_k127_1208905_24 CBS domain - - - 0.0000000000000000000000000000000000000005048 153.0
CMS3_k127_1208905_25 - - - - 0.000000000000000000000000000000000001988 139.0
CMS3_k127_1208905_26 Lrp/AsnC ligand binding domain - - - 0.00000000000000000000000000000000000674 137.0
CMS3_k127_1208905_27 Zn-finger in ubiquitin-hydrolases and other protein - - - 0.0000000000000000000000000000000001679 133.0
CMS3_k127_1208905_28 - - - - 0.00000000000000000000000000005261 118.0
CMS3_k127_1208905_29 - - - - 0.0000000000000000000000000005024 114.0
CMS3_k127_1208905_3 antibiotic catabolic process K18235 - - 1.74e-223 704.0
CMS3_k127_1208905_30 - - - - 0.00000000000000000000000001195 110.0
CMS3_k127_1208905_31 Glyco_18 K01183 - 3.2.1.14 0.000000000000000000001445 110.0
CMS3_k127_1208905_33 - - - - 0.000000000000004366 76.0
CMS3_k127_1208905_4 tRNA pseudouridine synthase K06176 - 5.4.99.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005594 588.0
CMS3_k127_1208905_5 PFAM Alcohol dehydrogenase K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 583.0
CMS3_k127_1208905_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 455.0
CMS3_k127_1208905_7 Pirin C-terminal cupin domain K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006092 397.0
CMS3_k127_1208905_8 COG1651 Protein-disulfide isomerase K21990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004866 360.0
CMS3_k127_1208905_9 Belongs to the PdaD family K02626 - 4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009709 341.0
CMS3_k127_1216079_0 Beta propeller domain - - - 0.0 1008.0
CMS3_k127_1216079_1 Catalyzes the NAD(P)( )-dependent oxidation of D-glucose to D-gluconate via gluconolactone. Can utilize both NAD( ) and NADP( ) as electron acceptor. Is involved in the degradation of glucose through a K00001 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000112 242.0
CMS3_k127_1216079_2 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000002228 225.0
CMS3_k127_1216079_3 His Kinase A (phosphoacceptor) domain - - - 0.00003634 54.0
CMS3_k127_1271419_0 Cell division protein 48 (CDC48) domain 2 K13525 - - 2.654e-259 801.0
CMS3_k127_1271419_1 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000079 439.0
CMS3_k127_1271419_2 Promotes the exchange of GDP for GTP in EF-1-alpha GDP, thus allowing the regeneration of EF-1-alpha GTP that could then be used to form the ternary complex EF-1-alpha GTP AAtRNA K03232 - - 0.0000000000000000000000000000000000004855 141.0
CMS3_k127_1271419_3 Zn-ribbon RNA-binding protein with a function in translation K07580 - - 0.000000000000000000000000000000000005719 136.0
CMS3_k127_127519_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0 1215.0
CMS3_k127_127519_1 Lamin Tail Domain - - - 0.0 1165.0
CMS3_k127_127519_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006864 309.0
CMS3_k127_127519_3 Predicted membrane protein (DUF2070) K08979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009994 267.0
CMS3_k127_127519_4 Ribosome biogenesis protein, C-terminal K09140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001727 259.0
CMS3_k127_131635_0 Diphthamide biosynthesis K07561 - 2.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005118 530.0
CMS3_k127_131635_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001143 273.0
CMS3_k127_1338535_0 phenylalanyl-tRNA synthetase, beta subunit K01890 - 6.1.1.20 7.364e-264 821.0
CMS3_k127_1338535_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 2 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008577 321.0
CMS3_k127_13674_0 ribosomal protein L3 K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003593 559.0
CMS3_k127_13674_1 Proteasome endopeptidase complex K03432 - 3.4.25.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 426.0
CMS3_k127_13674_2 Putative RNA methyltransferase K09142 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 421.0
CMS3_k127_13674_3 Ribosomal protein L4 K02930 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007404 413.0
CMS3_k127_13674_4 Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome K02892 - - 0.00000000000000000000000000000000000000000003137 162.0
CMS3_k127_13674_5 Domain of unknown function (DUF371) K09738 - - 0.000001674 49.0
CMS3_k127_1433226_0 Sugar-specific transcriptional regulator TrmB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 606.0
CMS3_k127_1433226_1 conserved protein implicated in secretion - - - 0.000000000000000000000000000000000000000000000001741 179.0
CMS3_k127_1433226_2 - - - - 0.000000000000000000000000000001411 124.0
CMS3_k127_1433226_3 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.000000000000000000005351 93.0
CMS3_k127_1436534_0 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004784 419.0
CMS3_k127_1436534_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 333.0
CMS3_k127_1436534_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006131 242.0
CMS3_k127_1436534_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000000000009515 189.0
CMS3_k127_1436534_4 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000002185 154.0
CMS3_k127_1436534_6 mttA/Hcf106 family K03116 - - 0.000000000000000000000002314 104.0
CMS3_k127_1436534_7 - - - - 0.000001145 51.0
CMS3_k127_144324_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K09759 - 6.1.1.23 8.898e-253 782.0
CMS3_k127_144324_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 2.379e-221 690.0
CMS3_k127_144324_2 Catalyzes the ATP- and formate-dependent formylation of 5-aminoimidazole-4-carboxamide-1-beta-d-ribofuranosyl 5'- monophosphate (AICAR) to 5-formaminoimidazole-4-carboxamide-1- beta-d-ribofuranosyl 5'-monophosphate (FAICAR) in the absence of folates K06863 - 6.3.4.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005809 391.0
CMS3_k127_144324_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000006838 140.0
CMS3_k127_144324_4 - - - - 0.0000000000000000000007516 96.0
CMS3_k127_16256_0 DEAD DEAH box helicase domain protein K03703,K10896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 516.0
CMS3_k127_16256_1 PPIC-type PPIASE domain K07533 - 5.2.1.8 0.0000000000000000000000000000000000000000000128 162.0
CMS3_k127_16256_2 - - - - 0.000000000000000000000000000000003824 130.0
CMS3_k127_16256_3 integrase family K04763 - - 0.0008282 42.0
CMS3_k127_168422_0 Domain of unknown function (DUF1297) K06863 - 6.3.4.23 1.19e-211 660.0
CMS3_k127_168422_1 Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA K03265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006706 499.0
CMS3_k127_168422_2 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 338.0
CMS3_k127_168422_3 Bifunctional nuclease K08999 - - 0.0000000000000000000000000000000000000000000001491 168.0
CMS3_k127_168422_4 HD domain K00951 - 2.7.6.5 0.0000000000000000000000000000000000000000004046 164.0
CMS3_k127_168422_5 - - - - 0.000000000000000000000000000000000003744 138.0
CMS3_k127_168422_6 - - - - 0.00000000000000000000000000000000000586 141.0
CMS3_k127_168422_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000000000000008719 109.0
CMS3_k127_168422_8 mttA/Hcf106 family K03116 - - 0.000000000000000000000003176 103.0
CMS3_k127_1794913_0 Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA K04795 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 391.0
CMS3_k127_1794913_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006401 320.0
CMS3_k127_1794913_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family K00555 - 2.1.1.215,2.1.1.216 0.000000000000000000000000000000000000000000005515 165.0
CMS3_k127_1880368_0 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006649 507.0
CMS3_k127_1880368_1 amine dehydrogenase activity K01406 - 3.4.24.40 0.000000000000000000000000000000000000000000000000000000000000000000000000002485 270.0
CMS3_k127_1880368_2 - - - - 0.000000000006282 67.0
CMS3_k127_1880368_3 - - - - 0.000000003855 68.0
CMS3_k127_1936956_0 aconitate hydratase K01681 - 4.2.1.3 0.0 1373.0
CMS3_k127_1936956_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 396.0
CMS3_k127_1936956_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 323.0
CMS3_k127_2013803_0 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009461 603.0
CMS3_k127_2013803_1 Sulfite reductase K00392 - 1.8.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007921 529.0
CMS3_k127_2013803_2 Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur K03146 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006415 526.0
CMS3_k127_2013803_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007918 293.0
CMS3_k127_2148047_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004227 356.0
CMS3_k127_2148047_1 COG1252 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 320.0
CMS3_k127_2148047_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001969 261.0
CMS3_k127_2152103_0 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 564.0
CMS3_k127_2152103_1 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 396.0
CMS3_k127_2152103_10 Alba K03622 - - 0.0000000000000000000000000001 117.0
CMS3_k127_2152103_11 YHS domain - - - 0.0000000000000000002851 87.0
CMS3_k127_2152103_2 UbiA prenyltransferase K02548 - 2.5.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005549 394.0
CMS3_k127_2152103_3 Histidine kinase K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 344.0
CMS3_k127_2152103_4 Transcriptional regulator K07108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003106 263.0
CMS3_k127_2152103_5 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007816 265.0
CMS3_k127_2152103_6 - - - - 0.0000000000000000000000000000000000000000000000000000000004073 204.0
CMS3_k127_2152103_7 transcriptional - - - 0.000000000000000000000000000000000000000000000000000000115 206.0
CMS3_k127_2152103_8 Cyclophilin-like K09143 - - 0.000000000000000000000000000000004157 134.0
CMS3_k127_2152103_9 cheY-homologous receiver domain - - - 0.00000000000000000000000000001525 122.0
CMS3_k127_2184434_0 adenylosuccinate lyase K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 379.0
CMS3_k127_2184434_1 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000005328 142.0
CMS3_k127_2184434_2 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.000000000000000000000000000000001432 133.0
CMS3_k127_2184434_3 sister chromatid segregation - - - 0.0005518 50.0
CMS3_k127_2249965_0 tRNA methyltransferase complex GCD14 subunit K07442 - 2.1.1.219,2.1.1.220 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 297.0
CMS3_k127_2249965_1 - - - - 0.00000000000000000000000000000000000000000000000000000006764 201.0
CMS3_k127_2249965_2 Required for chromosome condensation and partitioning - - - 0.000000000000000000000001928 115.0
CMS3_k127_2249965_4 PFAM Copper binding proteins, plastocyanin azurin family - - - 0.0000000000000000007378 94.0
CMS3_k127_2249965_5 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412,K03413 - 3.1.1.61,3.5.1.44 0.00000001652 56.0
CMS3_k127_225721_0 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03166 - 5.99.1.3 3.462e-233 722.0
CMS3_k127_225721_1 Belongs to the small heat shock protein (HSP20) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 300.0
CMS3_k127_225721_2 - - - - 0.000000000000000000000000000000000000000000000001373 175.0
CMS3_k127_225721_3 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 - 5.99.1.3 0.00000000000000000000000000000008775 125.0
CMS3_k127_225721_4 - - - - 0.00000000000000000000000001993 109.0
CMS3_k127_232229_0 Belongs to the phosphohexose mutase family K15778 - 5.4.2.2,5.4.2.8 5.356e-225 704.0
CMS3_k127_232229_1 Formyl transferase K01433 - 3.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005757 387.0
CMS3_k127_232229_2 Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, the RNA component of RNase P, box H ACA, box C D and box C' D' sRNAs K02936 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001435 242.0
CMS3_k127_236086_0 Enoyl-(Acyl carrier protein) reductase - - - 2e-322 993.0
CMS3_k127_236086_1 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004367 378.0
CMS3_k127_236086_2 tRNA intron endonuclease, N-terminal domain K01170 - 4.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003883 328.0
CMS3_k127_236086_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007385 247.0
CMS3_k127_236086_4 - - - - 0.000000000000000000000000000000000000000000000000000000021 198.0
CMS3_k127_236086_5 - - - - 0.00000000000000000000000000000000005336 134.0
CMS3_k127_2379298_0 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002465 586.0
CMS3_k127_2379298_1 Guanylyl transferase CofC like K14941 - 2.7.7.68 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009962 314.0
CMS3_k127_2379298_2 CAAX protease self-immunity - - - 0.000000000000000000000000000000000000000000000000000001706 196.0
CMS3_k127_2379298_3 Uncharacterised protein family UPF0052 K11212 - 2.7.8.28 0.00000000000000000000000000000000000000006721 151.0
CMS3_k127_2388274_0 synthetase (class II) K01880 - 6.1.1.14 3.665e-240 745.0
CMS3_k127_2388274_1 conserved protein implicated in secretion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005595 384.0
CMS3_k127_2483995_0 Isocitrate isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008312 584.0
CMS3_k127_2483995_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.000000000003547 66.0
CMS3_k127_2483995_2 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette K15342 - - 0.0000000007974 59.0
CMS3_k127_2789994_0 pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.0 1013.0
CMS3_k127_2789994_1 FAD dependent oxidoreductase K15736 - - 5.861e-225 702.0
CMS3_k127_2789994_10 COG1522 Transcriptional regulators - - - 0.00000000000000000000000000000000001181 136.0
CMS3_k127_2789994_12 serine-type endopeptidase activity - - - 0.000000000000000000000002358 113.0
CMS3_k127_2789994_13 transcriptional - - - 0.0000000000001833 76.0
CMS3_k127_2789994_2 D-isomer specific 2-hydroxyacid dehydrogenase K00015 - 1.1.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 499.0
CMS3_k127_2789994_3 F420-0:Gamma-glutamyl ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 385.0
CMS3_k127_2789994_4 TIGRFAM pyruvate ferredoxin flavodoxin oxidoreductase, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 387.0
CMS3_k127_2789994_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 341.0
CMS3_k127_2789994_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009715 264.0
CMS3_k127_2789994_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002001 262.0
CMS3_k127_2789994_8 - - - - 0.0000000000000000000000000000000000000000000000000002534 186.0
CMS3_k127_2789994_9 - - - - 0.00000000000000000000000000000000000001954 145.0
CMS3_k127_28712_0 fumarate reductase flavoprotein K00239 - 1.3.5.1,1.3.5.4 0.0 1060.0
CMS3_k127_28712_1 argininosuccinate lyase K01755 - 4.3.2.1 3.594e-240 749.0
CMS3_k127_28712_10 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002235 276.0
CMS3_k127_28712_11 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006675 258.0
CMS3_k127_28712_12 Iron-sulfur cluster assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000152 227.0
CMS3_k127_28712_13 serine-type endopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000104 217.0
CMS3_k127_28712_14 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 - - 0.0000000000000000000000000000000000000000000000000000000004442 203.0
CMS3_k127_28712_15 - - - - 0.00000000000000000000000000000000000000000000001179 172.0
CMS3_k127_28712_16 COG4618 ABC-type protease lipase transport system, ATPase and permease components - - - 0.0000000000000000000000000000000000000000000001158 170.0
CMS3_k127_28712_17 Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes K03622 - - 0.00000000000000000000000000000000000000001718 153.0
CMS3_k127_28712_18 - - - - 0.00000000000000000000000000000000000000002439 154.0
CMS3_k127_28712_19 microtubule nucleation K10389 GO:0000003,GO:0000070,GO:0000086,GO:0000166,GO:0000212,GO:0000226,GO:0000228,GO:0000242,GO:0000278,GO:0000280,GO:0000793,GO:0000794,GO:0000819,GO:0000922,GO:0000930,GO:0000931,GO:0001882,GO:0001883,GO:0003002,GO:0003006,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005768,GO:0005813,GO:0005814,GO:0005815,GO:0005819,GO:0005827,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0005881,GO:0005929,GO:0006810,GO:0006996,GO:0007010,GO:0007017,GO:0007020,GO:0007049,GO:0007051,GO:0007052,GO:0007056,GO:0007057,GO:0007059,GO:0007088,GO:0007097,GO:0007098,GO:0007127,GO:0007143,GO:0007144,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007310,GO:0007312,GO:0007346,GO:0007389,GO:0008150,GO:0008274,GO:0008275,GO:0008608,GO:0009266,GO:0009581,GO:0009582,GO:0009605,GO:0009628,GO:0009794,GO:0009798,GO:0009950,GO:0009953,GO:0009987,GO:0009994,GO:0010389,GO:0010457,GO:0010564,GO:0012505,GO:0015630,GO:0016043,GO:0016048,GO:0017076,GO:0019001,GO:0019953,GO:0021700,GO:0022402,GO:0022406,GO:0022412,GO:0022414,GO:0022607,GO:0030030,GO:0030031,GO:0030154,GO:0031023,GO:0031109,GO:0031252,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0032465,GO:0032501,GO:0032502,GO:0032504,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032954,GO:0032991,GO:0033043,GO:0034622,GO:0035639,GO:0036064,GO:0036094,GO:0042802,GO:0042995,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0045132,GO:0045177,GO:0045995,GO:0046785,GO:0046907,GO:0048285,GO:0048468,GO:0048469,GO:0048477,GO:0048599,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0051179,GO:0051225,GO:0051234,GO:0051235,GO:0051239,GO:0051258,GO:0051276,GO:0051302,GO:0051304,GO:0051306,GO:0051316,GO:0051321,GO:0051606,GO:0051640,GO:0051641,GO:0051642,GO:0051647,GO:0051649,GO:0051651,GO:0051656,GO:0051657,GO:0051661,GO:0051663,GO:0051704,GO:0051726,GO:0051783,GO:0055037,GO:0060271,GO:0061842,GO:0061982,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070925,GO:0071840,GO:0072687,GO:0090306,GO:0097159,GO:0097367,GO:0097435,GO:0097708,GO:0097711,GO:0097730,GO:0098813,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:0140013,GO:0140014,GO:0140056,GO:1901265,GO:1901363,GO:1901987,GO:1901990,GO:1902412,GO:1902749,GO:1902850,GO:1903046,GO:1903047,GO:1903436,GO:2000026 - 0.00000000000143 80.0
CMS3_k127_28712_2 membrane - - - 1.532e-222 698.0
CMS3_k127_28712_20 - - - - 0.000000000003169 76.0
CMS3_k127_28712_21 - - - - 0.000000003836 67.0
CMS3_k127_28712_3 ATPase family associated with various cellular activities (AAA) K04800 - - 1.235e-208 653.0
CMS3_k127_28712_4 glycosyl transferase family 2 K00721 - 2.4.1.83 3.826e-208 653.0
CMS3_k127_28712_5 - - - - 4.935e-197 618.0
CMS3_k127_28712_6 Phosphoenolpyruvate phosphomutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000588 535.0
CMS3_k127_28712_7 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000574 467.0
CMS3_k127_28712_8 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007138 456.0
CMS3_k127_28712_9 PFAM ParB domain protein nuclease K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 426.0
CMS3_k127_2881477_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 344.0
CMS3_k127_2881477_1 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 312.0
CMS3_k127_2881477_2 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 313.0
CMS3_k127_2881477_3 CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002534 251.0
CMS3_k127_2881477_4 PFAM Integral membrane protein TerC K05794 - - 0.00000000000000000000000000000000000000000000000000000000000000000004509 241.0
CMS3_k127_2881477_5 - - - - 0.000000000000000000000000000000000000000000000000000004567 192.0
CMS3_k127_2881477_6 DHHA1 domain K07463 - - 0.00000000000000000007219 89.0
CMS3_k127_2881477_7 - - - - 0.00001617 50.0
CMS3_k127_2881477_8 Predicted membrane protein (DUF2061) - - - 0.0001185 49.0
CMS3_k127_2883219_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007595 555.0
CMS3_k127_2883219_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001138 248.0
CMS3_k127_2883219_2 - - - - 0.000000000000000000000000000000000000001554 148.0
CMS3_k127_2922451_0 transcriptional - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000528 349.0
CMS3_k127_2922451_1 Uncharacterized conserved protein (DUF2203) - - - 0.00000000000000000000000000000000000000000000000000000000002184 208.0
CMS3_k127_2922451_2 Type II secretion system K07333 - - 0.000000000000000000000000000000000000000000000000000000002147 202.0
CMS3_k127_2952633_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 467.0
CMS3_k127_2952633_1 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 376.0
CMS3_k127_2952633_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000113 180.0
CMS3_k127_2959602_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 4.747e-208 651.0
CMS3_k127_2959602_1 Belongs to the eukaryotic ribosomal protein eS1 family K02984 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005566 374.0
CMS3_k127_2959602_2 RNA binding K07581 - - 0.00000000000001254 74.0
CMS3_k127_297747_0 PFAM SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008876 351.0
CMS3_k127_297747_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000004089 219.0
CMS3_k127_297747_2 COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins K07466 - - 0.000000000000000000000000000000000000000000000006263 173.0
CMS3_k127_297747_3 Metal dependent phosphohydrolases with conserved 'HD' motif. K06950 - - 0.0000000000000001743 79.0
CMS3_k127_297747_4 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.00001739 51.0
CMS3_k127_2987805_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000035 601.0
CMS3_k127_2987805_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001838 386.0
CMS3_k127_2987805_2 Rhomboid family - - - 0.000000000000000000000000000006397 120.0
CMS3_k127_2987805_3 Winged helix-turn-helix DNA-binding - - - 0.00000000000000007992 81.0
CMS3_k127_2993275_0 Binds the lower part of the 30S subunit head K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000817 418.0
CMS3_k127_2993275_1 Belongs to the eukaryotic ribosomal protein eS4 family K02987 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 393.0
CMS3_k127_2993275_2 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007295 283.0
CMS3_k127_2993275_3 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006656 261.0
CMS3_k127_2993275_4 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.000000000000000000000000000000000000000000000000000000000000000001207 228.0
CMS3_k127_2993275_5 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000000000000000000000000000000000399 188.0
CMS3_k127_2993275_6 Located at the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.000000000000000000000000000000000000000000000000001701 186.0
CMS3_k127_2993275_7 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.000000000000000000000000007154 110.0
CMS3_k127_2993275_8 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03538 - 3.1.26.5 0.00000000000000000000000002716 110.0
CMS3_k127_3006404_0 Glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003456 567.0
CMS3_k127_3006404_1 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 499.0
CMS3_k127_3006404_2 Uracil-DNA glycosylase K21929 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 340.0
CMS3_k127_3006404_3 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 282.0
CMS3_k127_3006404_4 sister chromatid segregation - - - 0.00000000000000000000000000000000000000000000001582 185.0
CMS3_k127_3017993_0 PFAM aminotransferase class-III K01845 - 5.4.3.8 1.715e-251 778.0
CMS3_k127_3017993_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 539.0
CMS3_k127_3017993_2 Belongs to the precorrin methyltransferase family K02303 - 2.1.1.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 470.0
CMS3_k127_3017993_3 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 451.0
CMS3_k127_3128112_0 Anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 4.15e-199 623.0
CMS3_k127_3128112_1 - - - - 0.0000000000000000000000000006813 113.0
CMS3_k127_312887_0 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002541 445.0
CMS3_k127_312887_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000119 239.0
CMS3_k127_312887_3 - - - - 0.000001426 51.0
CMS3_k127_3142417_0 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis K07332 - - 7.553e-271 841.0
CMS3_k127_3142417_1 Type II secretion system K07333 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 445.0
CMS3_k127_3142417_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 310.0
CMS3_k127_3142417_3 Type II secretion system K07333 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004514 283.0
CMS3_k127_3185821_0 Radical SAM K18285 - 2.5.1.120 1.43e-200 628.0
CMS3_k127_3185821_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 424.0
CMS3_k127_3185821_10 - - - - 0.00000000000000000000000000000004028 127.0
CMS3_k127_3185821_11 Tetratricopeptide repeat - - - 0.0000000000000000000000003136 106.0
CMS3_k127_3185821_12 Zinc finger CDGSH-type domain protein - - - 0.000000000000006638 75.0
CMS3_k127_3185821_13 - - - - 0.000877 44.0
CMS3_k127_3185821_2 General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation K03120 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004918 308.0
CMS3_k127_3185821_3 helix_turn_helix ASNC type - - - 0.00000000000000000000000000000000000000000000000000000000000000002028 226.0
CMS3_k127_3185821_4 Tetratricopeptide repeats - - - 0.0000000000000000000000000000000000000000000000000000000000003644 214.0
CMS3_k127_3185821_5 COG0589 Universal stress protein UspA and related nucleotide-binding proteins K07646,K20989 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000001011 209.0
CMS3_k127_3185821_6 DnaJ molecular chaperone homology domain K03686 - - 0.000000000000000000000000000000000000000000000000000000001026 207.0
CMS3_k127_3185821_7 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000000366 191.0
CMS3_k127_3185821_8 Thiamine-binding protein - - - 0.000000000000000000000000000000000007866 138.0
CMS3_k127_3185821_9 - - - - 0.0000000000000000000000000000000001197 136.0
CMS3_k127_3191598_0 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006144 308.0
CMS3_k127_3191598_1 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002028 260.0
CMS3_k127_3191598_2 - - - - 0.0000000000000000000000000006562 119.0
CMS3_k127_3191598_3 NHL repeat containing protein - - - 0.000000003388 72.0
CMS3_k127_3191598_4 cheY-homologous receiver domain K03413 - - 0.000000004934 63.0
CMS3_k127_3191598_5 PFAM NHL repeat containing protein - - - 0.00000009129 67.0
CMS3_k127_3191598_6 PFAM Cupin 2, conserved barrel domain protein K11312 - - 0.00001965 48.0
CMS3_k127_323494_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 4.754e-220 685.0
CMS3_k127_323494_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008689 259.0
CMS3_k127_3240333_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006632 524.0
CMS3_k127_3240333_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 377.0
CMS3_k127_3291305_0 Amidohydrolase family K01464 - 3.5.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000697 381.0
CMS3_k127_3291305_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004156 358.0
CMS3_k127_3291305_2 Creatinine amidohydrolase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 353.0
CMS3_k127_3291305_3 Ribose 5-phosphate isomerase K01807 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004693 341.0
CMS3_k127_3291305_4 snRNP Sm proteins K04796 - - 0.0000000000000000000000000000000000001539 141.0
CMS3_k127_3291305_5 Binds to the 23S rRNA K02922 - - 0.00000000000000000000000000000003358 124.0
CMS3_k127_3291305_6 Formyl transferase K01433 - 3.5.1.10 0.000000000000000006538 83.0
CMS3_k127_3309672_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 4.35e-322 989.0
CMS3_k127_3309672_1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain K01251 - 3.3.1.1 5.208e-245 759.0
CMS3_k127_3309672_2 Protein of unknown function (DUF726) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 387.0
CMS3_k127_3309672_3 domain, Protein - - - 0.00000000000000000000000000000000000004549 162.0
CMS3_k127_3338908_0 CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 477.0
CMS3_k127_343851_0 Hydroxymethylglutaryl-coenzyme A synthase N terminal K01641 - 2.3.3.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000952 494.0
CMS3_k127_343851_1 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009591 339.0
CMS3_k127_343851_2 - - - - 0.00000000000000000000000000000000000000000000000000000003688 201.0
CMS3_k127_343851_3 TIGRFAM type VI secretion system effector, Hcp1 family K11903 - - 0.0000000000000000000001143 104.0
CMS3_k127_343851_4 Type VI secretion system effector, Hcp K11903 - - 0.0006879 45.0
CMS3_k127_354924_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003667 613.0
CMS3_k127_354924_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005609 493.0
CMS3_k127_354924_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 358.0
CMS3_k127_354924_3 ABC-2 type transporter K01992 - - 0.00000000000000000000000009287 113.0
CMS3_k127_354924_4 COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins K07466 - - 0.0000000000000000001733 89.0
CMS3_k127_354924_5 - - - - 0.00000000000001974 83.0
CMS3_k127_354924_6 - - - - 0.0001071 44.0
CMS3_k127_3591023_0 DEAD DEAH box helicase K06877 - - 0.0 1437.0
CMS3_k127_3591023_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 5.392e-256 793.0
CMS3_k127_3591023_10 regulatory protein, arsR - - - 0.000000000000000000000000000000000000000000000000000000001477 202.0
CMS3_k127_3591023_11 Toprim domain - - - 0.0000000000000000000000000000000000000000000002178 169.0
CMS3_k127_3591023_12 mttA/Hcf106 family K03116 - - 0.000000000000000000000000000000000000000959 150.0
CMS3_k127_3591023_2 DNA Topoisomerase I (eukaryota) K03163 - 5.99.1.2 1.3e-240 746.0
CMS3_k127_3591023_3 major facilitator superfamily K08153,K08221 - - 4.483e-206 646.0
CMS3_k127_3591023_4 DNA methylase K00571,K00590 - 2.1.1.113,2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 477.0
CMS3_k127_3591023_5 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 454.0
CMS3_k127_3591023_6 Proteasome endopeptidase complex K03432 - 3.4.25.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 419.0
CMS3_k127_3591023_7 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005507 414.0
CMS3_k127_3591023_8 glutamine amidotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007737 361.0
CMS3_k127_3591023_9 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000036 222.0
CMS3_k127_361649_0 MGS-like domain K01955 - 6.3.5.5 2.908e-230 715.0
CMS3_k127_361649_1 Calcineurin-like phosphoesterase K06953 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005263 386.0
CMS3_k127_361649_2 - - - - 0.000000000000000000000000000000000000000001658 157.0
CMS3_k127_3629870_0 CAAX protease self-immunity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006792 308.0
CMS3_k127_3629870_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005431 273.0
CMS3_k127_3735921_0 Mitochondrial biogenesis AIM24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 377.0
CMS3_k127_3735921_1 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009684 257.0
CMS3_k127_3735921_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001182 235.0
CMS3_k127_3735921_3 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000005515 233.0
CMS3_k127_3735921_4 COG1525 Micrococcal nuclease (thermonuclease) homologs K01174 - 3.1.31.1 0.0000000000000000000000000000000000000000000000000000000000000007134 230.0
CMS3_k127_3735921_5 response regulator, receiver K03413,K07662,K07667 - - 0.000000000000000000000000000443 117.0
CMS3_k127_3735921_7 - - - - 0.00000000086 66.0
CMS3_k127_3823104_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 1.053e-263 816.0
CMS3_k127_3823104_1 Transporter associated domain - - - 1.077e-212 666.0
CMS3_k127_3823104_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00150 - 1.2.1.59 2.859e-198 621.0
CMS3_k127_3823104_3 A structure-specific endonuclease that resolves Holliday junction (HJ) intermediates during genetic recombination. Cleaves 4-way DNA junctions introducing paired nicks in opposing strands, leaving a 5'-terminal phosphate and a 3'-terminal hydroxyl group that are ligated to produce recombinant products - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001078 266.0
CMS3_k127_3823104_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000002678 234.0
CMS3_k127_3823104_5 - - - - 0.0000000000000000000000000000000000000000003817 159.0
CMS3_k127_3823104_6 xylanase chitin deacetylase K22278 - 3.5.1.104 0.00000000000000000000000000000000000000009473 166.0
CMS3_k127_3823104_7 - - - - 0.000000000000000000000000000001824 124.0
CMS3_k127_3823104_8 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000009845 118.0
CMS3_k127_3823104_9 nucleic-acid-binding protein containing a Zn-ribbon K07068 - - 0.0000000000000005846 79.0
CMS3_k127_3850311_0 UbiD family decarboxylase - - - 2.749e-241 750.0
CMS3_k127_3850311_1 - - - - 0.000000000000000000000000000000000000005102 148.0
CMS3_k127_3850311_2 Thioesterase superfamily - - - 0.0000000000000000000000000000004067 123.0
CMS3_k127_3850311_3 - - - - 0.00000000000000000001361 96.0
CMS3_k127_385948_0 Succinyl-CoA ligase like flavodoxin domain K18594 - - 0.0 1307.0
CMS3_k127_385948_1 DNA primase K02316 - - 4.567e-209 653.0
CMS3_k127_385948_10 CBS domain - - - 0.00000000000000000000000000000000001695 139.0
CMS3_k127_385948_11 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000000000000000000003238 101.0
CMS3_k127_385948_12 - - - - 0.000000000000001868 78.0
CMS3_k127_385948_2 Belongs to the enoyl-CoA hydratase isomerase family K15019 - 4.2.1.116 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 477.0
CMS3_k127_385948_3 Catalyzes the conversion of AMP and phosphate to adenine and ribose 1,5-bisphosphate (R15P). Exhibits phosphorylase activity toward CMP and UMP in addition to AMP. Functions in an archaeal AMP degradation pathway, together with R15P isomerase and RubisCO K18931 - 2.4.2.57 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007627 472.0
CMS3_k127_385948_4 Domain of unknown function DUF120 K07732 - 2.7.1.161 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 347.0
CMS3_k127_385948_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 292.0
CMS3_k127_385948_6 Cytidylyltransferase-like K00980,K14656 - 2.7.7.2,2.7.7.39 0.000000000000000000000000000000000000000000000000000000000000000000000000003743 256.0
CMS3_k127_385948_7 Iron-sulfur cluster assembly accessory protein K13628 - - 0.0000000000000000000000000000000000000000000000000000000000000001067 222.0
CMS3_k127_385948_8 Putative TM nitroreductase - - - 0.0000000000000000000000000000000000000000001516 164.0
CMS3_k127_385948_9 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.00000000000000000000000000000000001248 139.0
CMS3_k127_3877671_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K03234 - - 0.0 1332.0
CMS3_k127_3877671_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 415.0
CMS3_k127_3877671_10 - - - - 0.0000000000000004085 81.0
CMS3_k127_3877671_11 - - - - 0.0000000000007863 71.0
CMS3_k127_3877671_12 - - - - 0.000002178 49.0
CMS3_k127_3877671_13 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.00001226 51.0
CMS3_k127_3877671_14 - - - - 0.0001147 45.0
CMS3_k127_3877671_2 - - - - 0.00000000000000000000000000000000000000000000000000000000003182 207.0
CMS3_k127_3877671_3 CBS domain K03498 - - 0.00000000000000000000000000000000000000000000000000003207 190.0
CMS3_k127_3877671_4 - - - - 0.00000000000000000000000000000000000000000000008529 171.0
CMS3_k127_3877671_5 PFAM Copper binding proteins, plastocyanin azurin family - - - 0.0000000000000000000000000000000000000001292 160.0
CMS3_k127_3877671_6 - - - - 0.00000000000000000000000000000000003231 137.0
CMS3_k127_3877671_7 Mut7-C RNAse domain - - - 0.00000000000000000000000000000009998 126.0
CMS3_k127_3877671_8 - - - - 0.0000000000000000000000000000008343 124.0
CMS3_k127_3877671_9 - - - - 0.000000000000000000001638 95.0
CMS3_k127_3949094_0 Initiation factor K03242 - - 3.006e-243 754.0
CMS3_k127_3949094_1 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006788 583.0
CMS3_k127_3949094_2 Translation initiation factor 2, alpha subunit K03237 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004333 434.0
CMS3_k127_3949094_3 ATP corrinoid adenosyltransferase K19221 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000029 286.0
CMS3_k127_3949094_4 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000000000000000000103 224.0
CMS3_k127_3949094_5 Belongs to the eukaryotic ribosomal protein eS6 family K02991 - - 0.00000000000000000000000000000000000000000000000000000000000002447 216.0
CMS3_k127_3949094_6 more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA K11130 - - 0.000000000000000000000002205 104.0
CMS3_k127_3957130_0 ATPase family associated with various cellular activities (AAA) K04748 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 463.0
CMS3_k127_3957130_1 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004434 376.0
CMS3_k127_3957130_2 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009858 237.0
CMS3_k127_3971781_0 Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA K03265 - - 3.561e-235 732.0
CMS3_k127_3971781_1 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004547 347.0
CMS3_k127_3971781_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006233 308.0
CMS3_k127_3971781_3 Domain of unknown function (DUF4443) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007003 301.0
CMS3_k127_3971781_4 HIT domain K02503 - - 0.0000000000000000000000000000000000000000000000000000000000003104 213.0
CMS3_k127_3971781_5 Probable cobalt transporter subunit (CbtA) - - - 0.00000000000000000000000000000000000000000000000000007396 188.0
CMS3_k127_3971781_6 Probable cobalt transporter subunit (CbtB) - - - 0.0000000000000000000000000000001203 124.0
CMS3_k127_3971781_7 - - - - 0.0000000000000000000000003578 109.0
CMS3_k127_3996799_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 1e-323 995.0
CMS3_k127_3996799_2 - - - - 0.000001052 51.0
CMS3_k127_4065273_0 ATP synthase (C/AC39) subunit K02119 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002335 549.0
CMS3_k127_4065273_1 - - - - 0.00000000000000000000000000000000000000000000000000000000003077 207.0
CMS3_k127_4065273_2 - - - - 0.0000000000000000002196 91.0
CMS3_k127_4094348_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 2.156e-237 736.0
CMS3_k127_4094348_1 Indole-3-glycerol phosphate synthase K01609 - 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 314.0
CMS3_k127_4094348_2 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000004409 196.0
CMS3_k127_4094348_3 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.000000000000000000000000000000000000000001178 156.0
CMS3_k127_4104855_0 Type VI secretion system effector, Hcp K11903 - - 0.0000000000000000000000000000000000156 143.0
CMS3_k127_4104855_1 - - - - 0.00000000000000004469 91.0
CMS3_k127_421321_0 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004568 537.0
CMS3_k127_421321_1 Zinc-dependent metalloprotease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 544.0
CMS3_k127_421321_2 biotin-(Acetyl-CoA-carboxylase) ligase K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009388 499.0
CMS3_k127_421321_3 phosphoribosyltransferase K07101 - - 0.0000000000000000000000000000000000000000000000000004388 188.0
CMS3_k127_421321_4 - - - - 0.0000000000000000000000143 104.0
CMS3_k127_4222281_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 466.0
CMS3_k127_4222281_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000003402 247.0
CMS3_k127_4222281_2 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.0000000000000000000000000000000000000000000000000000000001354 204.0
CMS3_k127_4222281_3 - - - - 0.000000000000000000000000000000000000000000000000000000008 204.0
CMS3_k127_424286_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 3.15e-286 882.0
CMS3_k127_424286_1 Mechanosensitive ion channel K05802 - - 2.468e-281 873.0
CMS3_k127_424286_2 TIGRFAM lysine 2,3-aminomutase YodO family protein - - - 1.647e-263 816.0
CMS3_k127_424286_3 amino acid K03294 - - 4.229e-214 670.0
CMS3_k127_424286_4 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009457 426.0
CMS3_k127_424286_5 RNA methylase K07446 GO:0000049,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004809,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901363 2.1.1.213 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 402.0
CMS3_k127_424286_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006624 274.0
CMS3_k127_424286_7 PFAM Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000003278 205.0
CMS3_k127_424286_8 transcriptional regulators - - - 0.0000000000000000000000000000001501 124.0
CMS3_k127_424286_9 CBS domain - - - 0.00000000000000000000000003436 119.0
CMS3_k127_4405832_0 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006044 297.0
CMS3_k127_4405832_1 Protein of unknown function DUF99 K09120 - - 0.00000000000000000000000000000000000000000000000000000000000000000001797 238.0
CMS3_k127_4405832_2 geranylgeranyl reductase K17830 - 1.3.1.101,1.3.7.11 0.000000000000000000000000000000001326 131.0
CMS3_k127_4405832_3 4 iron, 4 sulfur cluster binding - - - 0.0000000000000000000000000006252 113.0
CMS3_k127_4441168_0 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006757 342.0
CMS3_k127_4441168_1 - - - - 0.000000000000000000000000000000000000000000000006623 172.0
CMS3_k127_4441168_2 - - - - 0.00000000000000000000000000000001247 129.0
CMS3_k127_4441168_3 - - - - 0.000000000000000001267 89.0
CMS3_k127_4486782_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006399 357.0
CMS3_k127_4486782_1 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 346.0
CMS3_k127_4486782_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001253 246.0
CMS3_k127_4486782_3 - - - - 0.00000003088 57.0
CMS3_k127_4520498_0 Belongs to the LDH MDH superfamily K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007087 550.0
CMS3_k127_4520498_1 Protein of unknown function DUF111 K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003252 523.0
CMS3_k127_4520498_2 Cysteine desulfurase K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003472 436.0
CMS3_k127_4520498_3 AIR carboxylase K06898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006015 404.0
CMS3_k127_4520498_4 tRNA methyl transferase K06864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 339.0
CMS3_k127_4524395_0 - - - - 2.437e-209 658.0
CMS3_k127_4524395_1 geranylgeranyl reductase K17830 - 1.3.1.101,1.3.7.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 443.0
CMS3_k127_4524395_2 Protein of unknown function (DUF1698) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 317.0
CMS3_k127_4524395_4 - - - - 0.000001029 52.0
CMS3_k127_4554988_0 RNase L inhibitor, RLI K06174 - - 0.0 1002.0
CMS3_k127_4554988_1 Met-10+ like-protein K15429 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 468.0
CMS3_k127_4554988_2 FR47-like protein K03789 - 2.3.1.128 0.0000000000000000000000000000000000000000000000000000000000000000000000001991 248.0
CMS3_k127_4554988_3 HTH DNA binding domain - - - 0.0000000000000000000000000000007313 123.0
CMS3_k127_4559133_0 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 452.0
CMS3_k127_4559133_1 - - - - 0.0000000000000000000000000000000000000000000000000003201 188.0
CMS3_k127_4559133_2 - - - - 0.00000000000000000000003167 99.0
CMS3_k127_4563070_0 Thiamine biosynthesis protein ThiC K03147 - 4.1.99.17 5.167e-268 827.0
CMS3_k127_4563070_1 Chorismate mutase type II K00812 - 2.6.1.1 2.561e-228 714.0
CMS3_k127_4563070_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 4.715e-203 635.0
CMS3_k127_4563070_3 Phosphomethylpyrimidine kinase K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 493.0
CMS3_k127_4563070_4 Prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007002 480.0
CMS3_k127_4563070_5 Nucleotidyl transferase K00966 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001434 280.0
CMS3_k127_4563070_6 Belongs to the eIF-2B alpha beta delta subunits family - - - 0.00000000000000009918 85.0
CMS3_k127_4563070_7 Mut7-C RNAse domain K09122 - - 0.0000000000000003906 80.0
CMS3_k127_4807040_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01867 - 6.1.1.2 5.208e-226 700.0
CMS3_k127_4807040_1 Phenylalanyl-tRNA synthetase alpha subunit K01889 - 6.1.1.20 9.795e-199 623.0
CMS3_k127_4812614_0 General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation K03120 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006606 342.0
CMS3_k127_4812614_1 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 284.0
CMS3_k127_4812614_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 283.0
CMS3_k127_4812614_3 ASCH domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001002 235.0
CMS3_k127_4812614_4 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000828 243.0
CMS3_k127_4812614_5 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000003835 184.0
CMS3_k127_4812614_6 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000000006419 177.0
CMS3_k127_4812614_7 - - - - 0.0000000000000000000000000005395 114.0
CMS3_k127_4838845_0 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 7.406e-287 887.0
CMS3_k127_4838845_1 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 524.0
CMS3_k127_4838845_2 N-formylglutamate amidohydrolase K01479 - 3.5.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 390.0
CMS3_k127_4838845_3 Ser thr protein kinase K07176 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 373.0
CMS3_k127_4838845_4 ATP-grasp domain K01295,K01439,K01921,K16181 - 3.4.17.11,3.5.1.18,6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 376.0
CMS3_k127_4838845_5 Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes K03622 - - 0.0000000000000000000000000001194 117.0
CMS3_k127_4838845_6 - K00960 - 2.7.7.6 0.00000000000000000000002332 98.0
CMS3_k127_4838845_7 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K07558 - 2.7.7.72 0.00000001503 63.0
CMS3_k127_4846749_0 LOR SDH bifunctional - - - 6.156e-201 631.0
CMS3_k127_4846749_1 Radical SAM K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006091 568.0
CMS3_k127_4846749_10 - - - - 0.000000000000000000000000000000000000003789 147.0
CMS3_k127_4846749_11 TIGRFAM archaeal flagellin N-terminal-like domain - - - 0.0000000000000000000000000000001232 128.0
CMS3_k127_4846749_12 TIGRFAM archaeal flagellin N-terminal-like domain - - - 0.0000000000000000000000000002391 133.0
CMS3_k127_4846749_13 Archaeal flagellar protein F K07329 - - 0.0000000000000000000000005336 109.0
CMS3_k127_4846749_14 - - - - 0.000000000000000000000003846 103.0
CMS3_k127_4846749_16 Histidine kinase - - - 0.000000000000000000002824 104.0
CMS3_k127_4846749_18 - - - - 0.000000000002048 74.0
CMS3_k127_4846749_2 ATPase associated with various cellular activities, AAA_5 K03924,K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 463.0
CMS3_k127_4846749_3 transcriptional - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 327.0
CMS3_k127_4846749_4 von Willebrand factor, type A K04043,K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001033 288.0
CMS3_k127_4846749_5 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000001902 258.0
CMS3_k127_4846749_6 KaiC K08482 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003086 259.0
CMS3_k127_4846749_8 HD domain K07023 - - 0.000000000000000000000000000000000000000000000000000000004447 205.0
CMS3_k127_4846749_9 - - - - 0.000000000000000000000000000000000000000000000000002803 183.0
CMS3_k127_4866898_0 DEAD/H associated K03724 - - 0.0 998.0
CMS3_k127_4866898_1 COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins K07466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004328 484.0
CMS3_k127_4961662_0 - - - - 0.0004386 52.0
CMS3_k127_4977749_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 7.596e-255 789.0
CMS3_k127_4977749_1 phosphoglycerate mutase K15635 - 5.4.2.12 1.682e-231 722.0
CMS3_k127_4977749_10 Universal stress protein - - - 0.00000000000000000000000000000000001348 139.0
CMS3_k127_4977749_11 Universal stress protein - - - 0.0000000000000000000000000000003399 127.0
CMS3_k127_4977749_12 - - - - 0.000000000000000000000000001361 115.0
CMS3_k127_4977749_13 Belongs to the eukaryotic ribosomal protein eS31 family K02977 - - 0.00000000000000000000009683 98.0
CMS3_k127_4977749_14 Diphthamide synthase K06927 - 6.3.1.14 0.00000000000001646 75.0
CMS3_k127_4977749_15 Domain of unknown function (DUF309) - - - 0.000000000002724 74.0
CMS3_k127_4977749_2 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 1.751e-203 636.0
CMS3_k127_4977749_3 Responsible for synthesis of pseudouridine from uracil- 54 and uracil-55 in the psi GC loop of transfer RNAs K07583 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003828 472.0
CMS3_k127_4977749_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005348 397.0
CMS3_k127_4977749_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002547 255.0
CMS3_k127_4977749_6 Acetyltransferase (GNAT) domain K00621 - 2.3.1.4 0.0000000000000000000000000000000000000000000000000000000008797 203.0
CMS3_k127_4977749_7 Belongs to the eukaryotic ribosomal protein eS24 family K02974 - - 0.000000000000000000000000000000000000000000000117 171.0
CMS3_k127_4977749_8 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00966 - 2.7.7.13 0.00000000000000000000000000000000000000002997 153.0
CMS3_k127_4977749_9 - - - - 0.0000000000000000000000000000000000000003525 153.0
CMS3_k127_4982647_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 1.323e-205 646.0
CMS3_k127_4982647_1 Belongs to the peptidase M24B family K01262,K01271 - 3.4.11.9,3.4.13.9 1.036e-195 613.0
CMS3_k127_4982647_2 Thiamine biosynthesis protein (ThiI) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 576.0
CMS3_k127_4982647_3 Nodulation protein S (NodS) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 401.0
CMS3_k127_4982647_4 Pfam:DUF137 K09722 - 6.3.2.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 364.0
CMS3_k127_4982647_5 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007826 318.0
CMS3_k127_4982647_6 RNA-metabolising metallo-beta-lactamase K07041 - - 0.00000000000000000000000000000000000000000000000000000000006075 204.0
CMS3_k127_4982647_7 - - - - 0.00000000000000000000000000000000000000000000002609 174.0
CMS3_k127_5001003_0 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains K00313 - - 1.244e-291 905.0
CMS3_k127_5001003_1 - - - - 6.085e-197 622.0
CMS3_k127_5001003_10 tRNA intron endonuclease, N-terminal domain K01170 - 4.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 318.0
CMS3_k127_5001003_11 sister chromatid segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003236 288.0
CMS3_k127_5001003_12 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001412 271.0
CMS3_k127_5001003_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001747 265.0
CMS3_k127_5001003_14 COG1522 Transcriptional regulators - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002011 262.0
CMS3_k127_5001003_15 NAD(P)H-dependent FMN reductase K00299 - 1.5.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000008005 252.0
CMS3_k127_5001003_16 HD domain K00951,K01139 - 2.7.6.5,3.1.7.2 0.00000000000000000000000000000000000000000000000000000000000000000001371 240.0
CMS3_k127_5001003_17 helix_turn_helix ASNC type - - - 0.0000000000000000000000000000000000000000000000000000000000002884 214.0
CMS3_k127_5001003_18 Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits K03236 - - 0.00000000000000000000000000000000000000000000000000000001015 199.0
CMS3_k127_5001003_19 Electron transfer flavoprotein, beta subunit K03521 - - 0.00000000000000000000000000000000000000000000000000000001439 208.0
CMS3_k127_5001003_2 Electron transfer flavoprotein domain K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000412 527.0
CMS3_k127_5001003_20 - - - - 0.00000000000000000000000000000000000000000001757 162.0
CMS3_k127_5001003_21 - - - - 0.0000000000000000000000000000000000000003607 149.0
CMS3_k127_5001003_22 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000008374 145.0
CMS3_k127_5001003_23 ribosomal protein K02866 - - 0.0000000000000000000000000000001042 125.0
CMS3_k127_5001003_24 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000533 119.0
CMS3_k127_5001003_26 - - - - 0.0000000000000000000004504 96.0
CMS3_k127_5001003_27 - - - - 0.000000000000000000001225 94.0
CMS3_k127_5001003_28 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.000000000000000000001385 100.0
CMS3_k127_5001003_29 small metal-binding protein - - - 0.000000000000002114 77.0
CMS3_k127_5001003_3 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007778 513.0
CMS3_k127_5001003_30 - - - - 0.000000000000003281 76.0
CMS3_k127_5001003_31 PFAM UspA domain protein - - - 0.0000000000000113 79.0
CMS3_k127_5001003_32 COG1938 Archaeal enzymes of ATP-grasp superfamily K06869 - - 0.0000000002799 64.0
CMS3_k127_5001003_33 - - - - 0.0000008636 54.0
CMS3_k127_5001003_4 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005078 445.0
CMS3_k127_5001003_5 nucleotidyltransferase activity K07076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 445.0
CMS3_k127_5001003_6 PFAM beta-lactamase domain protein K06897 - 2.5.1.105 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 426.0
CMS3_k127_5001003_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004043 383.0
CMS3_k127_5001003_8 COG1061 DNA or RNA helicases of superfamily II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 360.0
CMS3_k127_5001003_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 358.0
CMS3_k127_5004802_0 ABC 3 transport family K09816 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 429.0
CMS3_k127_5004802_1 PFAM ABC transporter K09817 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 427.0
CMS3_k127_5004802_2 Periplasmic solute binding protein K09815 - - 0.000000000000000000000000000000000000000000000000000000000000005096 228.0
CMS3_k127_5004802_3 Ribbon-helix-helix protein, copG family K07722 - - 0.000000000000000000000000000000000000006536 146.0
CMS3_k127_5024248_0 Major Intrinsic Protein K06188,K09866 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 409.0
CMS3_k127_5024248_1 transcriptional - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008866 366.0
CMS3_k127_5024248_2 AhpC/TSA antioxidant enzyme K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 287.0
CMS3_k127_5024248_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity - - - 0.000000000000000000000000000000000000001046 153.0
CMS3_k127_5024248_4 - - - - 0.0000000000000000000000001332 116.0
CMS3_k127_5047563_0 Belongs to the HMG-CoA reductase family K00054 - 1.1.1.88 1.232e-212 666.0
CMS3_k127_5047563_1 Glucose sorbosone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007169 577.0
CMS3_k127_5047563_2 ATP phosphoribosyltransferase K00765 - 2.4.2.17 0.00000000000000000000000000003009 117.0
CMS3_k127_5102530_0 PFAM Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 5.147e-197 618.0
CMS3_k127_5102530_1 factor TFIIB K03124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 570.0
CMS3_k127_5102530_10 Ribosomal protein S8e K02995 - - 0.00000000000000000000000000000000000000000000000000000000000007273 214.0
CMS3_k127_5102530_11 SRP19 protein K03105 - - 0.0000000000000000000000000000000000000000000006409 167.0
CMS3_k127_5102530_12 - - - - 0.00000000000000000000000000000000000000000003344 162.0
CMS3_k127_5102530_13 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000003947 138.0
CMS3_k127_5102530_14 RNA-binding protein involved in rRNA processing K07569 - - 0.000000000000000000000000000000001871 130.0
CMS3_k127_5102530_15 DUF167 K09131 - - 0.000000000000000000257 89.0
CMS3_k127_5102530_2 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 562.0
CMS3_k127_5102530_3 COG1522 Transcriptional regulators - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000818 515.0
CMS3_k127_5102530_4 FeS assembly ATPase SufC K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004566 477.0
CMS3_k127_5102530_5 Chlorite dismutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 361.0
CMS3_k127_5102530_6 chromosome segregation and condensation protein ScpA K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 360.0
CMS3_k127_5102530_7 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009682 346.0
CMS3_k127_5102530_8 segregation and condensation protein K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 309.0
CMS3_k127_5102530_9 Siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000002086 232.0
CMS3_k127_5106159_0 Radical SAM K11781 - 2.5.1.77 2.251e-201 630.0
CMS3_k127_5106159_1 modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 569.0
CMS3_k127_5106159_2 Sodium/calcium exchanger protein K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005658 269.0
CMS3_k127_51181_0 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02322 - 2.7.7.7 0.0 1322.0
CMS3_k127_51181_1 Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000001147 126.0
CMS3_k127_5121884_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I - - - 1.75e-209 660.0
CMS3_k127_5121884_1 Located on the platform of the 30S subunit K02948 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003613 269.0
CMS3_k127_5121884_10 - - - - 0.000000003114 61.0
CMS3_k127_5121884_2 PFAM Chromatin associated protein KTI12 K00860,K10837 - 2.7.1.164,2.7.1.25 0.00000000000000000000000000000000000000000000000009006 181.0
CMS3_k127_5121884_3 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0006725,GO:0006732,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009030,GO:0009058,GO:0009108,GO:0009229,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0042357,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0046483,GO:0046983,GO:0051186,GO:0051188,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.4.16 0.000000000000000000000000000000000000000000002009 176.0
CMS3_k127_5121884_4 Winged helix-turn-helix - - - 0.0000000000000000000000000000000008099 130.0
CMS3_k127_5121884_5 - - - - 0.0000000000000000000000006071 108.0
CMS3_k127_5121884_6 zinc finger - - - 0.0000000000000000001182 93.0
CMS3_k127_5121884_7 - - - - 0.0000000000000001209 84.0
CMS3_k127_5121884_8 - - - - 0.0000000000000002711 79.0
CMS3_k127_5121884_9 - - - - 0.000000001132 60.0
CMS3_k127_5142187_0 AAA domain K03546 - - 8.328e-303 942.0
CMS3_k127_5142187_1 Domain of unknown function DUF87 K06915 - - 2.447e-295 910.0
CMS3_k127_5142187_2 Calcineurin-like phosphoesterase superfamily domain K03547 - - 3.096e-195 613.0
CMS3_k127_5142187_3 NurA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 492.0
CMS3_k127_5142187_4 sister chromatid segregation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002803 292.0
CMS3_k127_5142187_5 - - - - 0.000000000000002026 87.0
CMS3_k127_5142187_6 - - - - 0.000000002194 59.0
CMS3_k127_5184224_0 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.0 1000.0
CMS3_k127_5184224_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 3.373e-243 758.0
CMS3_k127_5184224_2 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005492 519.0
CMS3_k127_5184224_3 Belongs to the MenA family. Type 1 subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006789 324.0
CMS3_k127_5184224_4 Nodulation protein S (NodS) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000002944 261.0
CMS3_k127_5184224_5 PFAM Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000003827 184.0
CMS3_k127_5184224_6 RNase L inhibitor, RLI K06174 - - 0.0000000000000000000000000000000000000000001086 159.0
CMS3_k127_5184224_7 - - - - 0.0000000000000000000000000000000000001202 145.0
CMS3_k127_5213074_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 1.693e-198 620.0
CMS3_k127_5213074_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000005794 230.0
CMS3_k127_5222755_0 Enoyl-(Acyl carrier protein) reductase - - - 0.0 1026.0
CMS3_k127_5222755_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005006 265.0
CMS3_k127_5222755_2 tRNA intron endonuclease, N-terminal domain K01170 - 4.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000001418 260.0
CMS3_k127_5222755_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001174 222.0
CMS3_k127_5222755_4 - - - - 0.00000000000000000000000000000000000000001841 153.0
CMS3_k127_5222755_5 metal-dependent hydrolase of the TIM-barrel fold K07045 - - 0.00000000000000001111 82.0
CMS3_k127_5233125_0 Large family of predicted nucleotide-binding domains K06865 - - 2.66e-290 901.0
CMS3_k127_5233125_1 modulator of DNA gyrase K03568 - - 2.585e-216 679.0
CMS3_k127_5233125_10 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000000000000000000000000009531 167.0
CMS3_k127_5233125_11 - - - - 0.0000000000000000000000000000000000000000008671 158.0
CMS3_k127_5233125_12 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.0000000000000000000000000000000000002669 147.0
CMS3_k127_5233125_13 - - - - 0.0000000000000000000000000000003818 135.0
CMS3_k127_5233125_14 - - - - 0.000000000000000000000000001557 119.0
CMS3_k127_5233125_16 - - - - 0.0000001036 53.0
CMS3_k127_5233125_17 - - - - 0.0004981 44.0
CMS3_k127_5233125_2 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 370.0
CMS3_k127_5233125_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 371.0
CMS3_k127_5233125_4 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007505 331.0
CMS3_k127_5233125_5 uracil-DNA glycosylase K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 302.0
CMS3_k127_5233125_6 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001308 259.0
CMS3_k127_5233125_7 iron dependent repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000007031 233.0
CMS3_k127_5233125_8 - - - - 0.00000000000000000000000000000000000000000000000000000000001193 208.0
CMS3_k127_5233125_9 - - - - 0.0000000000000000000000000000000000000000000000000001327 187.0
CMS3_k127_5276467_0 3-isopropylmalate dehydratase, large subunit K01703 - 4.2.1.33,4.2.1.35 2.541e-277 856.0
CMS3_k127_5276467_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 7.607e-251 777.0
CMS3_k127_5276467_2 Shwachman-Bodian-Diamond syndrome (SBDS) protein K14574 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 386.0
CMS3_k127_5276467_3 PFAM Nucleotidyl transferase K00966,K03430 - 2.6.1.37,2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 364.0
CMS3_k127_5276467_4 DNA-directed RNA polymerase, alpha subunit 40 kD subunit K03047 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000793 360.0
CMS3_k127_5276467_5 3-isopropylmalate dehydratase, small subunit K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 301.0
CMS3_k127_5276467_6 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004176 276.0
CMS3_k127_5276467_7 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000002508 240.0
CMS3_k127_5276467_8 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000005292 222.0
CMS3_k127_5276467_9 Belongs to the eukaryotic ribosomal protein eL18 family K02883 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000003227 89.0
CMS3_k127_5420398_0 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 368.0
CMS3_k127_5420398_1 COG1522 Transcriptional regulators - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001041 273.0
CMS3_k127_5420398_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family K00555 - 2.1.1.215,2.1.1.216 0.00000000000000000000000000000000000000000000000000000000000000000005155 234.0
CMS3_k127_5420398_3 - - - - 0.00000000000000000004427 91.0
CMS3_k127_5450607_0 Carbon-nitrogen hydrolase K11206 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009822 468.0
CMS3_k127_5450607_1 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008677 406.0
CMS3_k127_5450607_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001035 277.0
CMS3_k127_5450607_3 - - - - 0.000000000000000000000000000000000001112 139.0
CMS3_k127_5450607_4 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.000000000000000000000000000006378 119.0
CMS3_k127_5457321_0 Dihydrouridine synthase (Dus) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004836 557.0
CMS3_k127_5457321_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 412.0
CMS3_k127_5457321_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002898 278.0
CMS3_k127_5457321_3 COG1522 Transcriptional regulators - - - 0.000000000000000000000000000000000000006688 145.0
CMS3_k127_5457321_4 COG4618 ABC-type protease lipase transport system, ATPase and permease components - - - 0.00000000000000000000000000000001087 130.0
CMS3_k127_5486652_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009441 564.0
CMS3_k127_5486652_1 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008018 557.0
CMS3_k127_5486652_2 - - - - 0.00000000000000000000002028 101.0
CMS3_k127_55883_0 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 560.0
CMS3_k127_55883_1 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005636 428.0
CMS3_k127_55883_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center K02992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 370.0
CMS3_k127_55883_3 Participates in transcription termination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006174 285.0
CMS3_k127_55883_4 - - - - 0.0000000000000000000000000000000000000000000000000000004779 194.0
CMS3_k127_55883_5 PFAM ribosomal protein L7Ae L30e S12e Gadd45 K02908 - - 0.00000000000000000000000000000000000000000000002397 171.0
CMS3_k127_55883_6 Ribosomal protein S12/S23 K02973 GO:0000462,GO:0001666,GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006355,GO:0006357,GO:0006364,GO:0006396,GO:0006412,GO:0006450,GO:0006518,GO:0006606,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010646,GO:0010647,GO:0015031,GO:0015833,GO:0015935,GO:0016070,GO:0016072,GO:0017038,GO:0019219,GO:0019222,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0023051,GO:0023056,GO:0030490,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0034470,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034660,GO:0036293,GO:0036294,GO:0042221,GO:0042254,GO:0042274,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045184,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046907,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051252,GO:0051254,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0065007,GO:0065008,GO:0070482,GO:0070727,GO:0070887,GO:0071453,GO:0071456,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990904,GO:2000112,GO:2000638,GO:2000640,GO:2001141 - 0.00000000000000000000000000000000001477 140.0
CMS3_k127_55883_7 protein secretion by the type IV secretion system - - - 0.00000000001794 66.0
CMS3_k127_5633981_0 antibiotic catabolic process K18235 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003163 482.0
CMS3_k127_5633981_1 - - - - 0.0004424 52.0
CMS3_k127_5633981_2 S-layer homology domain - - - 0.0004889 52.0
CMS3_k127_56522_0 aspartate-semialdehyde dehydrogenase K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000532 577.0
CMS3_k127_56522_1 PFAM Aminotransferase class I and II K04720 - 4.1.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 442.0
CMS3_k127_56522_2 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009054 404.0
CMS3_k127_56522_3 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006849 366.0
CMS3_k127_5734232_0 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) - - - 1.59e-258 799.0
CMS3_k127_5734232_1 Transcription elongation factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 290.0
CMS3_k127_5734232_2 - - - - 0.0000000000000000000000000000000000008292 141.0
CMS3_k127_5734232_3 - - - - 0.0000004719 53.0
CMS3_k127_5734402_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 492.0
CMS3_k127_5734402_1 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006495 475.0
CMS3_k127_5734402_2 PFAM Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004014 272.0
CMS3_k127_5734402_3 Cyclophilin-like K09143 - - 0.00000000000000000000000000000000000000000000003785 173.0
CMS3_k127_5734402_4 metal-dependent protease of the PAD1 JAB1 superfamily K21140 - 3.13.1.6 0.0000000000000000000000000000000000000000002736 161.0
CMS3_k127_5734402_5 - - - - 0.0000000000000000000000000000000000000002266 151.0
CMS3_k127_5743246_0 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008921 435.0
CMS3_k127_5743246_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002546 260.0
CMS3_k127_5743246_2 Glyoxalase-like domain K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000002635 257.0
CMS3_k127_5743246_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000005814 218.0
CMS3_k127_5743246_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000006635 212.0
CMS3_k127_5743246_5 - - - - 0.00000000000000000000000000000000000003099 143.0
CMS3_k127_5743246_6 - - - - 0.0000000000000000241 83.0
CMS3_k127_5756110_0 Peptidase family M1 domain K01256,K13722 - 3.4.11.2 0.0 1384.0
CMS3_k127_5756110_1 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 7.418e-317 974.0
CMS3_k127_5756110_10 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000000000000146 212.0
CMS3_k127_5756110_11 DEAD DEAH box helicase domain protein K03703,K10896 - - 0.000000000000000000000000000000000000000000009331 163.0
CMS3_k127_5756110_12 PPIC-type PPIASE domain K07533 - 5.2.1.8 0.00000000000000000000000000000000000000000009418 160.0
CMS3_k127_5756110_13 - - - - 0.000000000000004511 78.0
CMS3_k127_5756110_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 608.0
CMS3_k127_5756110_3 LAO AO transport system ATPase K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 520.0
CMS3_k127_5756110_4 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007831 526.0
CMS3_k127_5756110_5 elongation factor Tu - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 504.0
CMS3_k127_5756110_6 Cytidylyltransferase-like K00952 - 2.7.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000181 282.0
CMS3_k127_5756110_7 Restriction endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000048 281.0
CMS3_k127_5756110_8 B12 binding domain K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001014 269.0
CMS3_k127_5756110_9 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000005859 244.0
CMS3_k127_5756915_0 histidine kinase HAMP region domain protein K03406,K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 447.0
CMS3_k127_5756915_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 381.0
CMS3_k127_5756915_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000443 336.0
CMS3_k127_5756915_3 response regulator, receiver K02485,K02490,K03413 - - 0.00000000000000000000000000000001087 130.0
CMS3_k127_5756915_4 sister chromatid segregation - - - 0.000000000000000000000000000003288 130.0
CMS3_k127_5756915_5 - - - - 0.00000002666 55.0
CMS3_k127_5756915_6 - - - - 0.00000006724 56.0
CMS3_k127_5756915_7 sister chromatid segregation - - - 0.00009145 53.0
CMS3_k127_5761057_0 Peptidase dimerisation domain - - - 5.868e-250 775.0
CMS3_k127_5761057_1 DNA polymerase elongation subunit (Family B) K02319 - 2.7.7.7 1.451e-195 634.0
CMS3_k127_5761057_10 - - - - 0.0000000000001261 74.0
CMS3_k127_5761057_2 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758 - 4.2.1.136 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 468.0
CMS3_k127_5761057_3 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 - 3.4.25.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 354.0
CMS3_k127_5761057_4 homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 311.0
CMS3_k127_5761057_5 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001159 282.0
CMS3_k127_5761057_6 PUA domain K07575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000218 257.0
CMS3_k127_5761057_7 tRNA methyltransferase complex GCD14 subunit K07442 - 2.1.1.219,2.1.1.220 0.0000000000000000000000000000000000000000000000000000000000000000000002908 241.0
CMS3_k127_5761057_8 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 - - 0.000000000000000000000000000000000000000000007698 173.0
CMS3_k127_5761057_9 - - - - 0.00000000000000000004297 91.0
CMS3_k127_5767236_0 TIGRFAM phenazine biosynthesis protein PhzF family K06998 - 5.3.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000002698 265.0
CMS3_k127_5767236_1 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000000000007165 200.0
CMS3_k127_5767236_2 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000003339 194.0
CMS3_k127_5771075_0 Pyruvate phosphate dikinase K01006 - 2.7.9.1 0.0 1324.0
CMS3_k127_5771075_1 DNA polymerase K02319 - 2.7.7.7 7.72e-266 822.0
CMS3_k127_5771075_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005687 347.0
CMS3_k127_5771075_3 Sugar efflux transporter for intercellular exchange K15383 - - 0.00000000000000000000000000000000001015 137.0
CMS3_k127_5779702_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1762.0
CMS3_k127_5779702_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.895e-296 921.0
CMS3_k127_5779702_10 - - - - 0.00000000000000000000000000000000000004468 143.0
CMS3_k127_5779702_11 Winged helix-turn-helix - - - 0.00000000000000000000000000008191 115.0
CMS3_k127_5779702_12 - - - - 0.00000000000000000000001217 101.0
CMS3_k127_5779702_13 COG1522 Transcriptional regulators - - - 0.00000000000000000000001665 102.0
CMS3_k127_5779702_2 TIGRFAM excinuclease ABC, C subunit K03703 - - 7.72e-292 900.0
CMS3_k127_5779702_3 Luciferase-like monooxygenase K14728 - - 3.607e-228 707.0
CMS3_k127_5779702_4 PFAM Iron-containing alcohol dehydrogenase K18602 - - 1.022e-200 625.0
CMS3_k127_5779702_5 MOFRL family K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005863 610.0
CMS3_k127_5779702_6 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000707 560.0
CMS3_k127_5779702_7 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005464 501.0
CMS3_k127_5779702_8 Pyridoxamine 5'-phosphate K07005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 353.0
CMS3_k127_5779702_9 - - - - 0.000000000000000000000000000000000000000000000008542 175.0
CMS3_k127_5785890_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 481.0
CMS3_k127_5785890_1 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K06989 - 1.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 461.0
CMS3_k127_5785890_2 sister chromatid segregation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 407.0
CMS3_k127_5785890_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007222 247.0
CMS3_k127_5785890_4 - - - - 0.00000000000000000001603 93.0
CMS3_k127_5786581_0 PFAM aminotransferase class-III K01845 - 5.4.3.8 8.714e-235 730.0
CMS3_k127_5786581_1 Na+-dependent bicarbonate transporter superfamily K07086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 590.0
CMS3_k127_5786581_10 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006842 352.0
CMS3_k127_5786581_11 Major Intrinsic Protein K06188 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 334.0
CMS3_k127_5786581_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001461 260.0
CMS3_k127_5786581_13 regulatory protein, arsR K03892,K21903 - - 0.00000000000000000000000000000000000000000000000000662 181.0
CMS3_k127_5786581_14 Nitrogen regulatory protein P-II - - - 0.00000000000000000000000000000000000000000000001425 172.0
CMS3_k127_5786581_15 PFAM low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000001604 171.0
CMS3_k127_5786581_16 Glycoside hydrolase family K01183 - 3.2.1.14 0.000000000000000000000000000000000000000000001293 186.0
CMS3_k127_5786581_17 COG3291 FOG PKD repeat - - - 0.00000000000007301 85.0
CMS3_k127_5786581_18 phosphorelay signal transduction system - - - 0.0000000000003719 74.0
CMS3_k127_5786581_19 Pfam:DUF385 - - - 0.000000000002566 67.0
CMS3_k127_5786581_2 FeS assembly protein SufB K09014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004264 573.0
CMS3_k127_5786581_20 Exonuclease - - - 0.00006402 53.0
CMS3_k127_5786581_3 Domain of unknown function (DUF4162) K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006306 567.0
CMS3_k127_5786581_4 Phosphate transporter family K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 550.0
CMS3_k127_5786581_5 PFAM ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 479.0
CMS3_k127_5786581_6 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002982 477.0
CMS3_k127_5786581_7 Belongs to the precorrin methyltransferase family K02303 - 2.1.1.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004177 449.0
CMS3_k127_5786581_8 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 432.0
CMS3_k127_5786581_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 431.0
CMS3_k127_5797196_0 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 4.013e-298 920.0
CMS3_k127_5797196_1 COG1914 Mn2 and Fe2 transporters of the NRAMP family - - - 1.058e-202 639.0
CMS3_k127_5797196_10 - - - - 0.000000000000000000000000002267 111.0
CMS3_k127_5797196_11 - - - - 0.00000000000000000007383 90.0
CMS3_k127_5797196_12 protein conserved in bacteria - - - 0.00000000000003233 84.0
CMS3_k127_5797196_14 Protein of unknown function (DUF1059) - - - 0.0000001772 54.0
CMS3_k127_5797196_15 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K08476 - - 0.0000003835 57.0
CMS3_k127_5797196_2 Histone acetyltransferase K07739 - 2.3.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000364 391.0
CMS3_k127_5797196_3 Methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003723 308.0
CMS3_k127_5797196_4 PFAM Ferritin, Dps family protein K02217 - 1.16.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003709 302.0
CMS3_k127_5797196_5 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.0000000000000000000000000000000000000000000000000000000002991 205.0
CMS3_k127_5797196_6 - - - - 0.000000000000000000000000000000000000000000000000000000003922 202.0
CMS3_k127_5797196_7 - - - - 0.00000000000000000000000000000000000000000000002432 183.0
CMS3_k127_5797196_9 - - - - 0.0000000000000000000000000000000000008759 153.0
CMS3_k127_58071_0 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 588.0
CMS3_k127_58071_1 Metal dependent phosphohydrolases with conserved 'HD' motif. K06950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 347.0
CMS3_k127_58071_2 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000002822 230.0
CMS3_k127_58071_3 - - - - 0.0000000000000000000000000000000000000000000000000000001271 196.0
CMS3_k127_58071_4 PFAM SNARE associated Golgi protein - - - 0.0000000000000000000001932 96.0
CMS3_k127_5813953_0 DNA polymerase K02319 - 2.7.7.7 3.943e-231 720.0
CMS3_k127_5813953_1 MafB19-like deaminase K01493 - 3.5.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003993 340.0
CMS3_k127_5813953_2 - - - - 0.000000000005107 66.0
CMS3_k127_5822343_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 371.0
CMS3_k127_5822343_1 PBS lyase HEAT-like repeat K06072 - 1.14.99.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 292.0
CMS3_k127_5822343_2 Ribosomal protein L15E K02877 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002403 273.0
CMS3_k127_5822343_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003748 267.0
CMS3_k127_5822343_4 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000003199 131.0
CMS3_k127_5822343_5 sister chromatid segregation - - - 0.000000000002415 73.0
CMS3_k127_5853090_0 UbiD family decarboxylase K03182 - 4.1.1.98 3.966e-281 867.0
CMS3_k127_5853090_1 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) - - - 2.48e-219 682.0
CMS3_k127_5853090_2 Catalyzes the oxidative deamination and cyclization of 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonic acid (ADH) to yield 3- dehydroquinate (DHQ), which is fed into the canonical shikimic pathway of aromatic amino acid biosynthesis K11646 - 1.4.1.24 8.978e-195 610.0
CMS3_k127_5853090_3 Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2- amino-3,7-dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids K16306 - 2.2.1.10,4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 436.0
CMS3_k127_5853090_4 Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate K03785 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002336 331.0
CMS3_k127_5853090_5 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006417 286.0
CMS3_k127_5853090_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009854 260.0
CMS3_k127_5853090_7 - - - - 0.000000000000000000000000000000000119 133.0
CMS3_k127_5853090_8 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K22222 - - 0.000000000005709 66.0
CMS3_k127_5882357_0 Mechanosensitive ion channel K05802 - - 2.109e-201 642.0
CMS3_k127_5882357_1 Sodium hydrogen exchanger - - - 0.00000000000000000000000000000000000000000000000000000000000000001379 228.0
CMS3_k127_5883146_0 PFAM Alcohol dehydrogenase GroES-like domain - - - 1.936e-230 714.0
CMS3_k127_5883146_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005024 557.0
CMS3_k127_5883146_10 - - - - 0.000000000000000000000000000000001504 135.0
CMS3_k127_5883146_11 Belongs to the PDCD5 family K06875 - - 0.00000000000000000000000000001788 119.0
CMS3_k127_5883146_12 CBS domain K03498 - - 0.000000000000000000000000003035 112.0
CMS3_k127_5883146_13 - - - - 0.0000000000000000000001576 98.0
CMS3_k127_5883146_2 HpcH/HpaI aldolase/citrate lyase family K01644 - 4.1.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 453.0
CMS3_k127_5883146_3 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 349.0
CMS3_k127_5883146_4 Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA K14568 - 2.1.1.260 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 316.0
CMS3_k127_5883146_5 May be involved in maturation of the 30S ribosomal subunit K02966 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001321 278.0
CMS3_k127_5883146_6 TPR repeat K07126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006222 261.0
CMS3_k127_5883146_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000326 237.0
CMS3_k127_5883146_8 Lrp/AsnC ligand binding domain K03718 - - 0.00000000000000000000000000000000000000000000000000000000000000000294 228.0
CMS3_k127_5883146_9 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03540 - 3.1.26.5 0.000000000000000000000000000000000000000000002271 165.0
CMS3_k127_5887277_0 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 336.0
CMS3_k127_5887277_1 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003497 252.0
CMS3_k127_5887277_2 Cysteine desulfurase K04487 - 2.8.1.7 0.0000003583 51.0
CMS3_k127_59145_0 SNF2 family N-terminal domain - - - 0.0 1014.0
CMS3_k127_59145_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 2.031e-203 638.0
CMS3_k127_59145_2 FAD linked - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000703 593.0
CMS3_k127_59145_3 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 323.0
CMS3_k127_59145_4 - - - - 0.000000000000000000000000000000000000002211 154.0
CMS3_k127_59145_5 - - - - 0.000000000000000000000000000000000406 134.0
CMS3_k127_59145_6 - - - - 0.00000000000000000000001367 100.0
CMS3_k127_59145_7 - - - - 0.00000000000000000000001981 104.0
CMS3_k127_59145_8 RNA secondary structure unwinding - - - 0.00000000000000000001305 96.0
CMS3_k127_59145_9 PFAM SPFH domain Band 7 family - - - 0.00000000000000000003645 91.0
CMS3_k127_598050_0 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 - 5.99.1.3 0.0 1051.0
CMS3_k127_598050_1 - - - - 3.069e-244 769.0
CMS3_k127_598050_10 - - - - 0.00000000000000000000000000000000000000000001274 163.0
CMS3_k127_598050_11 - - - - 0.0000000000000000000000000000000000000000000834 162.0
CMS3_k127_598050_12 - - - - 0.0000000000000002364 81.0
CMS3_k127_598050_2 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03166 - 5.99.1.3 1.339e-226 704.0
CMS3_k127_598050_3 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 475.0
CMS3_k127_598050_4 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000428 308.0
CMS3_k127_598050_5 Serine threonine protein kinase involved in cell cycle control K07178 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 297.0
CMS3_k127_598050_6 Belongs to the small heat shock protein (HSP20) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002446 273.0
CMS3_k127_598050_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000001799 237.0
CMS3_k127_598050_8 Protein of unknown function (DUF541) K09807 - - 0.000000000000000000000000000000000000000000000000000000000001099 218.0
CMS3_k127_598050_9 K homology RNA-binding domain K06961 - - 0.000000000000000000000000000000000000000000000000000001511 197.0
CMS3_k127_6011244_0 ERCC4 domain K10848 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 389.0
CMS3_k127_6011244_1 PIN domain of ribonuclease K07060 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005826 257.0
CMS3_k127_6011244_2 TIGRFAM CRISPR-associated protein Cas4 K03466,K07464,K15342,K19465 - 3.1.12.1 0.00000000000000000000000000000000000000000000000000000000000005372 220.0
CMS3_k127_6011244_3 Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding K04798 - - 0.00000000000000000000000000000000000000001586 156.0
CMS3_k127_6011244_4 Ribosomal L37ae protein family K02921 - - 0.000000000000000000000000000000001575 130.0
CMS3_k127_6018067_0 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 583.0
CMS3_k127_6018067_1 Metal dependent phosphohydrolases with conserved 'HD' motif. K06950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005872 346.0
CMS3_k127_6018067_2 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000002058 230.0
CMS3_k127_6018067_3 - - - - 0.00000000000000000000000000000000000000000000000000000009271 196.0
CMS3_k127_6018067_4 PFAM SNARE associated Golgi protein - - - 0.00000000000003301 72.0
CMS3_k127_6042129_0 Archease protein family (MTH1598/TM1083) - - - 0.0000000000000000000000000000000000000000000000000000000000000000166 225.0
CMS3_k127_6042129_1 acid phosphatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000001352 219.0
CMS3_k127_6042129_2 OsmC-like protein - - - 0.000000000000000000000000000000000000000000000000004804 184.0
CMS3_k127_6050220_0 Radical SAM K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 578.0
CMS3_k127_6050220_1 Dual specificity phosphatase, catalytic domain K14165 - 3.1.3.16,3.1.3.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007655 297.0
CMS3_k127_6050220_2 - - - - 0.0000000000000000000001248 97.0
CMS3_k127_6050220_3 - - - - 0.0000000000000000001127 91.0
CMS3_k127_6050220_4 - - - - 0.00000000000000003556 81.0
CMS3_k127_6074748_0 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 527.0
CMS3_k127_6074748_1 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006116 399.0
CMS3_k127_6074748_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 376.0
CMS3_k127_6074748_3 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004062 351.0
CMS3_k127_6074748_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 305.0
CMS3_k127_6074748_5 PFAM Aminotransferase class I and II K00817 - 2.6.1.9 0.0000000000004907 68.0
CMS3_k127_610978_0 PFAM Aldehyde dehydrogenase K00135,K18601 - 1.2.1.16,1.2.1.20,1.2.1.79 2.932e-277 856.0
CMS3_k127_610978_1 Phosphate uptake regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 589.0
CMS3_k127_610978_10 RibD C-terminal domain K14654 - 1.1.1.302 0.0000000000000000000000000000000000000000000000001682 184.0
CMS3_k127_610978_11 - - - - 0.00000000000000000000000000000000000000000000004537 173.0
CMS3_k127_610978_12 H subunit K02107 - - 0.0000000000000000000000000000000000000001429 152.0
CMS3_k127_610978_13 Catalyzes the formation of 2-amino-5-formylamino-6- ribofuranosylamino-4(3H)-pyrimidinone ribonucleotide monophosphate and inorganic phosphate from GTP. Also has an independent pyrophosphate phosphohydrolase activity K08096 - 3.5.4.29 0.0000000000000000000000000000000008518 132.0
CMS3_k127_610978_14 - - - - 0.0000000000000000000009112 96.0
CMS3_k127_610978_2 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005454 579.0
CMS3_k127_610978_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 552.0
CMS3_k127_610978_4 Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation complexes. Seems to translocate with the RNA polymerase following initiation and acts by binding to the non template strand of the transcription bubble in elongation complexes K03136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 328.0
CMS3_k127_610978_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 324.0
CMS3_k127_610978_6 Hemerythrin HHE cation binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 289.0
CMS3_k127_610978_7 Patch-forming domain C2 of tRNA-guanine transglycosylase K07398 - - 0.0000000000000000000000000000000000000000000000000000000000000000002079 232.0
CMS3_k127_610978_8 Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs K07254 - 2.1.1.206 0.00000000000000000000000000000000000000000000000000000000002088 210.0
CMS3_k127_610978_9 Contacts the emerging nascent chain on the ribosome K03626 - - 0.000000000000000000000000000000000000000000000000000002049 192.0
CMS3_k127_613559_0 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000000000000325 197.0
CMS3_k127_613559_1 - - - - 0.0000000000000000000000003549 122.0
CMS3_k127_6186490_0 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009853 403.0
CMS3_k127_6186490_1 UPF0126 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004936 303.0
CMS3_k127_6186490_2 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02869 - - 0.000003214 49.0
CMS3_k127_6229649_0 PFAM Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007803 433.0
CMS3_k127_6229649_1 DnaJ-class molecular chaperone with C-terminal Zn finger domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 386.0
CMS3_k127_6229649_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 332.0
CMS3_k127_6229649_3 Cupin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004826 274.0
CMS3_k127_6229649_4 HIT domain K02503 - - 0.0000000000000000000000000000000000000000000000000000000001218 205.0
CMS3_k127_6229649_5 PFAM Cupin 2, conserved barrel domain protein K01485 - 3.5.4.1 0.000000000000000000000000000000000000000000000000000000001932 201.0
CMS3_k127_6229649_6 - - - - 0.00000000000000000000000000000000000004253 145.0
CMS3_k127_6229649_7 - - - - 0.00000000000000000000000000000004621 128.0
CMS3_k127_6229649_8 COG5608 Conserved secreted protein - - - 0.000314 51.0
CMS3_k127_6236156_0 Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA K03265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 494.0
CMS3_k127_6236156_1 PFAM ParB domain protein nuclease K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 325.0
CMS3_k127_6236156_2 regulatory protein, arsR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001203 254.0
CMS3_k127_6236156_3 Protein of unknown function (DUF541) K09807 - - 0.00000000000000000000000000000000000000000000000000000000008439 210.0
CMS3_k127_6236156_4 - - - - 0.0000000000000005769 79.0
CMS3_k127_6236156_5 response regulator, receiver K03413 - - 0.0000000001013 64.0
CMS3_k127_6257354_0 Methionine synthase K00548 - 2.1.1.13 1.436e-303 937.0
CMS3_k127_6257354_1 cytochrome-c peroxidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 359.0
CMS3_k127_6257354_2 NUDIX domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000198 280.0
CMS3_k127_6257354_3 Belongs to the ribosomal protein L31e family K02910 - - 0.00000000000000000000000000000000000000000001744 165.0
CMS3_k127_6257354_4 Belongs to the eukaryotic ribosomal protein eL39 family K02924 - - 0.000000000000000000001637 94.0
CMS3_k127_6320227_0 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 289.0
CMS3_k127_6320227_1 - - - - 0.000000000000000000000000000000000000000000001124 166.0
CMS3_k127_6320227_2 - - - - 0.000000000000000000000000000000000000000004091 155.0
CMS3_k127_6320227_3 ribosomal protein S14 K02954 - - 0.00000000000000000000000000000003082 126.0
CMS3_k127_6320227_4 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000000000000000009209 121.0
CMS3_k127_6320227_5 - - - - 0.00000000000000003708 81.0
CMS3_k127_6686000_0 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 348.0
CMS3_k127_6686000_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006722 357.0
CMS3_k127_6734911_0 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 4.896e-224 696.0
CMS3_k127_6734911_1 Protein of unknown function (DUF521) K09123 - - 1.696e-209 655.0
CMS3_k127_6734911_2 Glycosyl transferase family 1 - - - 9.052e-204 640.0
CMS3_k127_6734911_3 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 504.0
CMS3_k127_6734911_4 Phosphoadenosine phosphosulfate reductase family K00390 - 1.8.4.10,1.8.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 366.0
CMS3_k127_6734911_5 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002854 362.0
CMS3_k127_6734911_6 - - - - 0.0000000000000000000000000000000000000000000000000000000002068 205.0
CMS3_k127_6734911_7 Protein of unknown function DUF126 K09128 - - 0.000000000000000000000000000000000000000000000000000003034 192.0
CMS3_k127_6734911_8 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000000000000000000007351 169.0
CMS3_k127_6734911_9 - - - - 0.000000000000000000000000000000000000000000006771 164.0
CMS3_k127_6738498_0 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 494.0
CMS3_k127_6738498_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 419.0
CMS3_k127_6738498_2 RNA methylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009606 374.0
CMS3_k127_6738498_3 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004163 295.0
CMS3_k127_6738498_4 Rieske 2Fe-2S K05710 - - 0.00000000000000000000000000000000000000000000000000001978 188.0
CMS3_k127_6738498_5 Belongs to the UPF0147 family K09721 - - 0.0000000000000000000000000000000000000003788 149.0
CMS3_k127_6738498_6 - - - - 0.00000000000002527 73.0
CMS3_k127_6751141_0 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 6.129e-196 615.0
CMS3_k127_6751141_1 MobA-like NTP transferase domain K19712 - 2.7.7.62 0.00000000000000000000000000000000000000000000000000000000000000000000004062 246.0
CMS3_k127_6751141_2 Binds to the 23S rRNA K02929 - - 0.00000000000000000000000000000000000000000000000001587 180.0
CMS3_k127_6751141_3 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.000000000000000003755 85.0
CMS3_k127_6751141_4 PFAM ribosomal protein K02978 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000001555 66.0
CMS3_k127_6751155_0 Domain of unknown function (DUF373) K08975 - - 7.022e-196 615.0
CMS3_k127_6751155_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 596.0
CMS3_k127_6751155_10 - - - - 0.000000000000000000000000000000000000000000000000000002011 196.0
CMS3_k127_6751155_11 Bacterial Fe(2+) trafficking - - - 0.000000000000000000000000000000000000000000000005725 172.0
CMS3_k127_6751155_12 Winged helix-turn-helix - - - 0.00000000000000000000000000000000000000000000007188 169.0
CMS3_k127_6751155_13 THUMP domain K06963 - - 0.0000000000000000000000000000000000000000000001018 174.0
CMS3_k127_6751155_14 - - - - 0.00000000000000000000000000000000000000001202 161.0
CMS3_k127_6751155_15 Protein of unknown function (DUF424) K09148 - - 0.00000000000000000000000000000000000002559 145.0
CMS3_k127_6751155_16 - - - - 0.000000000000000000000000000000009544 127.0
CMS3_k127_6751155_17 - - - - 0.00000000000000000000000000000003097 131.0
CMS3_k127_6751155_18 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.000000000000000000000000000000116 129.0
CMS3_k127_6751155_19 transcription factor (CBF NF-Y) - - - 0.000000000000000000000000000003005 120.0
CMS3_k127_6751155_2 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids K15888 - 2.5.1.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 456.0
CMS3_k127_6751155_20 - - - - 0.000000000000000000000003462 101.0
CMS3_k127_6751155_21 ribosomal protein K02962 - - 0.0000000000000000002387 92.0
CMS3_k127_6751155_22 Serine threonine protein kinase involved in cell cycle control K07178 - 2.7.11.1 0.000000003939 58.0
CMS3_k127_6751155_3 Orotidine 5'-phosphate decarboxylase / HUMPS family K01591 - 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 425.0
CMS3_k127_6751155_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008084 372.0
CMS3_k127_6751155_5 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 362.0
CMS3_k127_6751155_6 Kinase binding protein CGI-121 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 317.0
CMS3_k127_6751155_7 Translation initiation factor K03238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001435 266.0
CMS3_k127_6751155_8 Sua5 YciO YrdC YwlC family K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000144 255.0
CMS3_k127_6751155_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000001408 215.0
CMS3_k127_6777383_0 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 499.0
CMS3_k127_6777383_1 Probable cobalt transporter subunit (CbtA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007713 263.0
CMS3_k127_6777383_2 transcriptional regulators - - - 0.00000000000000000000000000000000000000000000000000001301 190.0
CMS3_k127_6777383_3 transcriptional regulators - - - 0.00000000000000000000000000000000000000000000000003135 181.0
CMS3_k127_6808503_0 Domain of unknown function (DUF373) K08975 - - 3.054e-208 653.0
CMS3_k127_6808503_1 Translation initiation factor K03238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 288.0
CMS3_k127_6808503_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003521 252.0
CMS3_k127_6808503_3 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids K15888 - 2.5.1.89 0.00000000000000000000000000000000000000000000005749 169.0
CMS3_k127_6808503_4 Protein of unknown function (DUF424) K09148 - - 0.00000000000000000000000000000000000000001055 154.0
CMS3_k127_6808503_5 - - - - 0.0000000000000000000000003541 104.0
CMS3_k127_6808503_6 Serine threonine protein kinase involved in cell cycle control K07178 - 2.7.11.1 0.00000000000000000001635 91.0
CMS3_k127_6859358_0 TCP-1/cpn60 chaperonin family K22447 - - 3.037e-308 948.0
CMS3_k127_6859358_1 ROK family K00847 - 2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008905 448.0
CMS3_k127_6859358_2 Domain of unknown function (DUF2024) - - - 0.000000000000000000000000000000000000000001473 156.0
CMS3_k127_6862275_0 ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA K06932 - 6.3.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 472.0
CMS3_k127_6862275_1 Glucose sorbosone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 363.0
CMS3_k127_6884919_0 PFAM Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 374.0
CMS3_k127_6884919_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000001229 239.0
CMS3_k127_6884919_2 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000008478 184.0
CMS3_k127_6884919_3 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000007866 138.0
CMS3_k127_6884919_5 - - - - 0.00000000000000000000000001247 113.0
CMS3_k127_6884919_6 Cytochrome C oxidase, subunit II K00376,K02275 - 1.7.2.4,1.9.3.1 0.000000000000000000000006742 103.0
CMS3_k127_6902535_0 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000001492 118.0
CMS3_k127_6902535_1 - - - - 0.00000000000000008619 96.0
CMS3_k127_6902535_2 COG1680 Beta-lactamase class C and other penicillin binding - - - 0.000000000000003124 91.0
CMS3_k127_6902535_3 Thrombospondin type 3 - - - 0.0000000001478 75.0
CMS3_k127_6902743_0 Sodium hydrogen exchanger - - - 6.734e-211 660.0
CMS3_k127_6902743_1 Histone acetyltransferase K07739 - 2.3.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005463 504.0
CMS3_k127_6902743_2 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 329.0
CMS3_k127_6902835_0 Copper binding proteins, plastocyanin/azurin family - - - 0.0000000000000000000000000000000000000000000002632 170.0
CMS3_k127_6902835_1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) - - - 0.00000000000000000000000000000000000000000001414 169.0
CMS3_k127_693125_0 PFAM Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002511 397.0
CMS3_k127_693125_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 312.0
CMS3_k127_693125_2 Cupin - - - 0.000000000000000000000000000000000000000000000000000000000000000001564 229.0
CMS3_k127_693125_3 - - - - 0.000000000000000000000000000000000000001441 151.0
CMS3_k127_693125_4 PFAM Cupin 2, conserved barrel domain protein K01485 - 3.5.4.1 0.00000000000000000002389 92.0
CMS3_k127_6957088_0 AMMECR1 K09141 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001478 267.0
CMS3_k127_6957088_1 Fibronectin-binding protein A N-terminus (FbpA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001972 243.0
CMS3_k127_6957088_2 Mut7-C RNAse domain K09122 - - 0.000000000000000000000000000000000000000006766 160.0
CMS3_k127_6957088_3 Protein of unknown function DUF126 K09128 - - 0.0000000000000000000002438 97.0
CMS3_k127_6961371_0 GTPase of unknown function C-terminal K06942 - - 1.733e-226 705.0
CMS3_k127_6961371_1 CoA binding domain K06929 - - 0.00000000000000000000000000000000000000000000000000000000006976 206.0
CMS3_k127_6961371_2 - - - - 0.0000000000000000000000000000000000000001513 153.0
CMS3_k127_6961371_3 Male sterility protein K00091,K19997 - 1.1.1.219,5.1.3.26 0.000000000000000000000000002316 123.0
CMS3_k127_6961371_4 TIGRFAM conserved repeat domain - - - 0.0000000000000000329 92.0
CMS3_k127_6982223_0 ABC1 family - - - 2.106e-246 769.0
CMS3_k127_6982223_1 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 3.54e-225 702.0
CMS3_k127_6982223_10 - - - - 0.0000000000000000000000004102 106.0
CMS3_k127_6982223_12 - - - - 0.0000000005511 60.0
CMS3_k127_6982223_13 Peptidase family M50 - - - 0.000000002313 58.0
CMS3_k127_6982223_14 - - - - 0.0000551 49.0
CMS3_k127_6982223_2 May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity K06965 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000488 554.0
CMS3_k127_6982223_3 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 411.0
CMS3_k127_6982223_4 thymidylate kinase K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008543 308.0
CMS3_k127_6982223_5 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001455 246.0
CMS3_k127_6982223_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000003602 237.0
CMS3_k127_6982223_7 - - - - 0.0000000000000000000000000000000000000000000000000000007894 194.0
CMS3_k127_6982223_8 Belongs to the small heat shock protein (HSP20) family - - - 0.00000000000000000000000000000000000000000002858 164.0
CMS3_k127_6982223_9 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000000000000000000000000005108 160.0
CMS3_k127_7018629_0 Exchanges the guanine residue with 7-cyano-7- deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D- loop) of archaeal tRNAs K18779 - 2.4.2.48 6.324e-271 839.0
CMS3_k127_7018629_1 GTPase of unknown function C-terminal K06942 - - 1.699e-213 668.0
CMS3_k127_7018629_2 Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe) K15449 - 4.1.3.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000056 587.0
CMS3_k127_7018629_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37 K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005433 581.0
CMS3_k127_7018629_4 Mn2 -dependent serine threonine protein kinase K08851 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005049 314.0
CMS3_k127_7018629_5 NADH ubiquinone oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000006422 218.0
CMS3_k127_7018629_6 Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates K18532 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000001748 193.0
CMS3_k127_7018629_7 - - - - 0.00000000000000000000000000000000000000000000000001808 181.0
CMS3_k127_7018629_9 Belongs to the HAM1 NTPase family K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000003583 168.0
CMS3_k127_7024014_0 D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo K09716 - 3.1.1.96 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 408.0
CMS3_k127_7024014_1 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.000000000000000000000000000000000000000000000002381 174.0
CMS3_k127_7024014_2 Binds to the 23S rRNA K02885 - - 0.00000000000000000000000000000000000000000005786 161.0
CMS3_k127_7024014_3 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K07342 - - 0.000000000000000000000000000385 113.0
CMS3_k127_7024014_4 Transcription elongation factor Spt5 K02601 - - 0.0000000000007961 68.0
CMS3_k127_7029266_0 Histidine kinase K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007067 516.0
CMS3_k127_7029266_1 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000001485 191.0
CMS3_k127_7029266_2 transcriptional - - - 0.0000000000000000000000000000000000000000000000000333 188.0
CMS3_k127_70676_0 Radical SAM K11780 - 2.5.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000695 612.0
CMS3_k127_70676_1 Trypsin-like serine protease with C-terminal PDZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005091 598.0
CMS3_k127_70676_2 PFAM Glycosyl transferase family 2 K07011,K11936 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004511 342.0
CMS3_k127_7529299_0 Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2 K03243 - - 0.0 1043.0
CMS3_k127_7529299_1 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000000000007776 243.0
CMS3_k127_7529299_2 Binds to the 23S rRNA K02896 - - 0.0000000000000000000000000000000001041 132.0
CMS3_k127_7529299_3 Belongs to the eukaryotic ribosomal protein eS28 family K02979 - - 0.0000000000000000000000000000001682 123.0
CMS3_k127_9016_0 inner membrane component K02034 - - 2.11e-236 736.0
CMS3_k127_9016_1 inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 598.0
CMS3_k127_9016_2 - - - - 0.00000000000000000000000000000000000000003828 152.0
CMS3_k127_9016_4 - - - - 0.00000000000000000000000000000000002581 137.0
CMS3_k127_9016_5 Arsenate reductase and related K00537 - 1.20.4.1 0.0000000000000000000000000005816 114.0
CMS3_k127_9016_6 - - - - 0.0000000000000000000000001385 109.0
CMS3_k127_9016_7 Cytochrome C oxidase, subunit II K00376,K02275 - 1.7.2.4,1.9.3.1 0.000000000000001689 75.0
CMS3_k127_9016_8 domain, Protein - - - 0.00001243 57.0